BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016883
(381 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255544860|ref|XP_002513491.1| GTP-binding protein enga, putative [Ricinus communis]
gi|223547399|gb|EEF48894.1| GTP-binding protein enga, putative [Ricinus communis]
Length = 624
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 206/260 (79%), Positives = 240/260 (92%), Gaps = 1/260 (0%)
Query: 101 SDGQDFGIDVDALEREAKDAVREYSSLLSRQLIIQDETDDRKDSGKKQKKRKTTIGNVPE 160
SD D+ ID+DALE+EA+D VREYS+ LSRQL I+D++DD+K++ +KQK++K TI ++P+
Sbjct: 79 SDSDDYAIDIDALEQEAEDVVREYSTSLSRQLRIEDDSDDKKET-RKQKRQKFTIPDIPD 137
Query: 161 HLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGG 220
+LLPRVAIVGRPNVGKSALFNRLVGGN+AIVVDEPGVTRDR+YGRSFWG+ EFM+VDTGG
Sbjct: 138 NLLPRVAIVGRPNVGKSALFNRLVGGNKAIVVDEPGVTRDRLYGRSFWGDFEFMVVDTGG 197
Query: 221 VLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLV 280
VL +S+SQ N+MEDLAITTTIGM+GIPLA+REAAVARMPSMIERQA AA+EES VIIFLV
Sbjct: 198 VLTISQSQDNVMEDLAITTTIGMDGIPLASREAAVARMPSMIERQAAAAVEESSVIIFLV 257
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLPISAIS 340
DGQAGL AAD EIADWLRKNY +KFIILAVNKCESP+KGIMQ +EFWSLG SP+PISA+S
Sbjct: 258 DGQAGLIAADIEIADWLRKNYSNKFIILAVNKCESPKKGIMQAAEFWSLGLSPIPISALS 317
Query: 341 GTGTGELLDLVCSELKKVEV 360
GTGTGELLDLVCS+L KVEV
Sbjct: 318 GTGTGELLDLVCSQLAKVEV 337
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 81/177 (45%), Gaps = 37/177 (20%)
Query: 157 NVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFM 214
N ++ +P +AIVGRPNVGKS++ N LVG +R IV G TRD + F G +F
Sbjct: 343 NEEQNYVPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAI-DTEFSGPDGQKFR 401
Query: 215 LVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIE----RQATAAI 270
L+DT G+ R AAVA S+ E +A AI
Sbjct: 402 LIDTAGI----------------------------RRRAAVASSGSLTEALSVNRAFRAI 433
Query: 271 EESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFW 327
S V+ +++ A +T D IAD + K K ++ VNK ++ Q + ++
Sbjct: 434 RRSDVVALVIEAMACITEQDFRIADRIEKE--GKGCLIVVNKWDTIPNKNQQTATYY 488
>gi|359478737|ref|XP_002282837.2| PREDICTED: GTPase Der-like [Vitis vinifera]
Length = 676
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 200/262 (76%), Positives = 231/262 (88%), Gaps = 1/262 (0%)
Query: 99 DESDGQDFGIDVDALEREAKDAVREYSSLLSRQLIIQ-DETDDRKDSGKKQKKRKTTIGN 157
+E + + +DVDALE EAK AVREYS LSRQL I+ D ++ K G KQKK K+T N
Sbjct: 107 EEVANRSYSLDVDALEEEAKHAVREYSRFLSRQLSIEEDGANELKGRGGKQKKSKSTTRN 166
Query: 158 VPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVD 217
+P+HLLPRV IVGRPNVGKSALFNRLVGGN+AIVVDEPGVTRDR+YGR+FWG++EFM++D
Sbjct: 167 IPDHLLPRVTIVGRPNVGKSALFNRLVGGNKAIVVDEPGVTRDRLYGRAFWGDYEFMVID 226
Query: 218 TGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVII 277
TGGVL +SKSQ N+ME+LAIT TIGM+GIPLA+REAAVARMP+MIE+QATAAIEES VII
Sbjct: 227 TGGVLTISKSQDNVMEELAITKTIGMDGIPLASREAAVARMPTMIEKQATAAIEESSVII 286
Query: 278 FLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLPIS 337
FLVDGQAGL+AAD EIADWLRKNY +K I+LAVNKCESP+KGIMQ EFWSLGF+PLPIS
Sbjct: 287 FLVDGQAGLSAADVEIADWLRKNYSNKCIVLAVNKCESPKKGIMQALEFWSLGFTPLPIS 346
Query: 338 AISGTGTGELLDLVCSELKKVE 359
A+SGTGTGELLDLVCS LKK+E
Sbjct: 347 AVSGTGTGELLDLVCSGLKKIE 368
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 90/198 (45%), Gaps = 47/198 (23%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVD 217
E+ +P +AIVGRPNVGKS++ N LVG +R IV G TRD + F G ++ L+D
Sbjct: 377 ENYVPAIAIVGRPNVGKSSILNALVGEDRTIVSPVSGTTRDAI-DTEFTGPDGQKYRLID 435
Query: 218 TGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIE----RQATAAIEES 273
T G+ R AAVA S E +A AI S
Sbjct: 436 TAGI----------------------------RRRAAVASSGSTTEALSVNRAFRAIRRS 467
Query: 274 CVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS----- 328
V+ +++ A +T D IA+ + + K ++ VNK ++ Q + ++
Sbjct: 468 DVVALVIEAMACITEQDYRIAERIERE--GKGCLIVVNKWDTIPNKNQQTATYYEQDVRE 525
Query: 329 ----LGFSPLPIS-AISG 341
LG++P+ S AI+G
Sbjct: 526 KLRVLGWAPIVYSTAIAG 543
>gi|449448728|ref|XP_004142117.1| PREDICTED: GTPase Der-like [Cucumis sativus]
Length = 660
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 215/282 (76%), Positives = 252/282 (89%), Gaps = 4/282 (1%)
Query: 82 DSPFEDEDDDAEYED---VDDESDGQDFGIDVDALEREAKDAVREYSSLLSRQLIIQDET 138
D+ F + DAE ED DDE D +D+ IDV+A E EAKD +REYSS LSR+LII DE
Sbjct: 72 DAGFPENYVDAEGEDPGEFDDEFDDEDYTIDVEAFEEEAKDVLREYSSSLSRELIIDDEL 131
Query: 139 DDRKDSGKKQKKRKTTIGNV-PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGV 197
D+ ++G+K+KKRKTT NV P+HLLPRVAIVGRPNVGKSA+FNRLVGGNRAIVVDEPGV
Sbjct: 132 SDQSETGRKKKKRKTTPRNVIPDHLLPRVAIVGRPNVGKSAMFNRLVGGNRAIVVDEPGV 191
Query: 198 TRDRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVAR 257
TRDR+YGRSFWG++EFM+VDTGGVL+VSK+Q +++E+LAI+TTIGM+GIPLA+REAAVAR
Sbjct: 192 TRDRLYGRSFWGDNEFMVVDTGGVLSVSKTQNDVIEELAISTTIGMDGIPLASREAAVAR 251
Query: 258 MPSMIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPR 317
MPSMIERQATAA+EE+ V+IFLVDGQAGLTAADEEIADWLR+NY DKF ILAVNKCESPR
Sbjct: 252 MPSMIERQATAAVEEASVVIFLVDGQAGLTAADEEIADWLRRNYSDKFTILAVNKCESPR 311
Query: 318 KGIMQVSEFWSLGFSPLPISAISGTGTGELLDLVCSELKKVE 359
KG+MQ SEFWSLGF+PLP+SA+SGTGTGELLDL+CS L+KVE
Sbjct: 312 KGMMQASEFWSLGFTPLPVSALSGTGTGELLDLLCSRLQKVE 353
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 81/174 (46%), Gaps = 37/174 (21%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVD 217
E +P VAIVGRPNVGKS++ N LVG +R IV G TRD + F G+ +F L+D
Sbjct: 362 EDYIPAVAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAI-DTEFTGQDGQKFRLID 420
Query: 218 TGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIE----RQATAAIEES 273
T G+ R AAVA SM E +A AI S
Sbjct: 421 TAGI----------------------------RRRAAVASSGSMTESLSVNRAFRAIRRS 452
Query: 274 CVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFW 327
V+ +++ A +T D +IA+ + K K ++ VNK ++ Q + ++
Sbjct: 453 DVVALVIEALACITEQDCKIAERIEKE--GKGCLIVVNKWDTIPNKNQQTAMYY 504
>gi|449524852|ref|XP_004169435.1| PREDICTED: GTPase Der-like, partial [Cucumis sativus]
Length = 414
Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust.
Identities = 215/282 (76%), Positives = 252/282 (89%), Gaps = 4/282 (1%)
Query: 82 DSPFEDEDDDAEYED---VDDESDGQDFGIDVDALEREAKDAVREYSSLLSRQLIIQDET 138
D+ F + DAE ED DDE D +D+ IDV+A E EAKD +REYSS LSR+LII DE
Sbjct: 72 DAGFPENYVDAEGEDPGEFDDEFDDEDYTIDVEAFEEEAKDVLREYSSSLSRELIIDDEL 131
Query: 139 DDRKDSGKKQKKRKTTIGNV-PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGV 197
D+ ++G+K+KKRKTT NV P+HLLPRVAIVGRPNVGKSA+FNRLVGGNRAIVVDEPGV
Sbjct: 132 SDQSETGRKKKKRKTTPRNVIPDHLLPRVAIVGRPNVGKSAMFNRLVGGNRAIVVDEPGV 191
Query: 198 TRDRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVAR 257
TRDR+YGRSFWG++EFM+VDTGGVL+VSK+Q +++E+LAI+TTIGM+GIPLA+REAAVAR
Sbjct: 192 TRDRLYGRSFWGDNEFMVVDTGGVLSVSKTQNDVIEELAISTTIGMDGIPLASREAAVAR 251
Query: 258 MPSMIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPR 317
MPSMIERQATAA+EE+ V+IFLVDGQAGLTAADEEIADWLR+NY DKF ILAVNKCESPR
Sbjct: 252 MPSMIERQATAAVEEASVVIFLVDGQAGLTAADEEIADWLRRNYSDKFTILAVNKCESPR 311
Query: 318 KGIMQVSEFWSLGFSPLPISAISGTGTGELLDLVCSELKKVE 359
KG+MQ SEFWSLGF+PLP+SA+SGTGTGELLDL+CS L+KVE
Sbjct: 312 KGMMQASEFWSLGFTPLPVSALSGTGTGELLDLLCSRLQKVE 353
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 29/41 (70%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRD 200
E +P VAIVGRPNVGKS++ N LVG +R IV G TRD
Sbjct: 362 EDYIPAVAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRD 402
>gi|356542027|ref|XP_003539473.1| PREDICTED: GTPase Der-like [Glycine max]
Length = 632
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 208/265 (78%), Positives = 234/265 (88%), Gaps = 5/265 (1%)
Query: 98 DDESDGQDFGIDVDALEREAKDAVREYSSLLSRQLIIQDE-TDDRKDSGKKQKK--RKTT 154
DDE G+ +D+ ALE+EAKDAV YSS LS+ L I+DE DRK+S + ++K R+T
Sbjct: 63 DDEESGELDDLDLVALEQEAKDAVEAYSSSLSQILSIEDEEKSDRKESAQSRRKSPRRTK 122
Query: 155 IGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFM 214
I +P++LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDR+YGRS+WGEHEFM
Sbjct: 123 I--IPDNLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRLYGRSYWGEHEFM 180
Query: 215 LVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESC 274
+VDTGGV+ VSKSQ +ME+LAITTTIGM+GIPLA REAAVARMPSMIERQATAA+EES
Sbjct: 181 VVDTGGVITVSKSQATVMEELAITTTIGMDGIPLAVREAAVARMPSMIERQATAAVEESS 240
Query: 275 VIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL 334
VIIFLVDGQAGLTAADEEIADWLRKNY DK++ILAVNKCESPRK IMQ SEFWSLGF PL
Sbjct: 241 VIIFLVDGQAGLTAADEEIADWLRKNYSDKYVILAVNKCESPRKRIMQASEFWSLGFEPL 300
Query: 335 PISAISGTGTGELLDLVCSELKKVE 359
PISAISGTGTGELLDLVCS L+K+E
Sbjct: 301 PISAISGTGTGELLDLVCSGLQKIE 325
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 81/172 (47%), Gaps = 29/172 (16%)
Query: 158 VPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFML 215
V E +P ++IVGRPNVGKS++ N LVG +R IV G TRD + F G +F L
Sbjct: 331 VEEDYVPAISIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAI-DTEFTGPDGQKFQL 389
Query: 216 VDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCV 275
+DT G+ T I G +T EA + +A AI S V
Sbjct: 390 IDTAGIRK--------------RTAIASAG---STTEA-------LSVNRAFRAIRRSDV 425
Query: 276 IIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFW 327
+ +++ A +T D +IA+ + K K ++ VNK ++ Q + ++
Sbjct: 426 VALVIEAMACITEQDYKIAERIEKE--GKGCVIVVNKWDTIPNKNQQTASYY 475
>gi|62320818|dbj|BAD93758.1| hypothetical protein [Arabidopsis thaliana]
Length = 370
Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust.
Identities = 183/263 (69%), Positives = 220/263 (83%), Gaps = 4/263 (1%)
Query: 113 LEREAKDAVREYSSLLSRQLIIQDETDDRKDSGKKQKKRKTTIGNVPEHLLPRVAIVGRP 172
LE+EA+D VR+Y++ LSR+L I+DET + K++ +K K+ +PEHLL RVAIVGRP
Sbjct: 108 LEKEARDIVRDYATTLSRELKIEDETIEGKETRRKGKRLAKNTQQIPEHLLQRVAIVGRP 167
Query: 173 NVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIM 232
NVGKSALFNRLVG NRAIVVDEPGVTRDR+YGRS+WG+ EF++VDTGGV+ VSKS +M
Sbjct: 168 NVGKSALFNRLVGENRAIVVDEPGVTRDRLYGRSYWGDQEFVVVDTGGVMTVSKSPSGVM 227
Query: 233 EDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGLTAADEE 292
E+L ++TTIGMEGIPL++REAA+ARMPSMIE+QATAA++ES VIIF+VDGQAG + AD E
Sbjct: 228 EELNVSTTIGMEGIPLSSREAAIARMPSMIEKQATAAVDESAVIIFVVDGQAGPSGADVE 287
Query: 293 IADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLPISAISGTGTGELLDLVC 352
IADWLRK Y K+IILAVN CESPRKG+MQ SEFWSLGF+P+PISA+SGTGTGELLDLVC
Sbjct: 288 IADWLRKYYSHKYIILAVNMCESPRKGLMQASEFWSLGFTPIPISALSGTGTGELLDLVC 347
Query: 353 SELKKVEVCIGFLL----ICNAI 371
S L K+EVC G IC I
Sbjct: 348 SGLIKLEVCNGLSFFQKQICAGI 370
>gi|297829768|ref|XP_002882766.1| EMB2738 [Arabidopsis lyrata subsp. lyrata]
gi|297328606|gb|EFH59025.1| EMB2738 [Arabidopsis lyrata subsp. lyrata]
Length = 661
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 176/245 (71%), Positives = 214/245 (87%)
Query: 113 LEREAKDAVREYSSLLSRQLIIQDETDDRKDSGKKQKKRKTTIGNVPEHLLPRVAIVGRP 172
LE+EA+D VR+Y+++LSR+L ++DET + K++ +K K+ +PEHLL RVAIVGRP
Sbjct: 106 LEKEARDIVRDYATILSRELKLEDETIEGKETRRKGKRLAKNTQQIPEHLLQRVAIVGRP 165
Query: 173 NVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIM 232
NVGKSALFNRLVG NRAIVVDEPGVTRDR+YGRS+WG+ EF++VDTGGV+ VSKS +M
Sbjct: 166 NVGKSALFNRLVGENRAIVVDEPGVTRDRLYGRSYWGDQEFVVVDTGGVMTVSKSPSGVM 225
Query: 233 EDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGLTAADEE 292
E+L ++TTIGMEGIPL++REAA+ARMPSMIE+QATAA++ES VIIF+VDGQAG + AD E
Sbjct: 226 EELNVSTTIGMEGIPLSSREAAIARMPSMIEKQATAAVDESAVIIFVVDGQAGSSGADVE 285
Query: 293 IADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLPISAISGTGTGELLDLVC 352
IADWLRK Y K+IILAVNKCESPRKG+MQ SEFWSLGF+P+PISA+SGTGTGELLDLVC
Sbjct: 286 IADWLRKYYSHKYIILAVNKCESPRKGLMQASEFWSLGFTPIPISALSGTGTGELLDLVC 345
Query: 353 SELKK 357
S L K
Sbjct: 346 SGLNK 350
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 90/191 (47%), Gaps = 39/191 (20%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWG--EHEFMLVDTGG 220
+P +AI+GRPNVGKS++ N LV +R IV G TRD + F G +F L+DT G
Sbjct: 366 IPAIAIIGRPNVGKSSILNALVREDRTIVSPVSGTTRDAIDA-EFTGPDGEKFRLIDTAG 424
Query: 221 VLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLV 280
+ S ++ G +T EA M +A AI S V+ ++
Sbjct: 425 IRKKS--------------SVASSG---STTEA-------MSVNRAFRAIRRSDVVALVI 460
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCES-PRKGIMQVSEF--------WSLGF 331
+ A +T D +IA+ + + K ++ VNK ++ P K + + SL +
Sbjct: 461 EAMACITEQDLKIAERIERE--GKGCLVVVNKWDTIPNKNQETAAHYEDDVREKLRSLKW 518
Query: 332 SPLPIS-AISG 341
+P+ S AI+G
Sbjct: 519 APIVYSTAITG 529
>gi|145332365|ref|NP_001078139.1| GTP-binding protein [Arabidopsis thaliana]
gi|332641626|gb|AEE75147.1| GTP-binding protein [Arabidopsis thaliana]
Length = 587
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 177/246 (71%), Positives = 214/246 (86%)
Query: 113 LEREAKDAVREYSSLLSRQLIIQDETDDRKDSGKKQKKRKTTIGNVPEHLLPRVAIVGRP 172
LE+EA+D VR+Y++ LSR+L I+DET + K++ +K K+ +PEHLL RVAIVGRP
Sbjct: 108 LEKEARDIVRDYATTLSRELKIEDETIEGKETRRKGKRLAKNTQQIPEHLLQRVAIVGRP 167
Query: 173 NVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIM 232
NVGKSALFNRLVG NRAIVVDEPGVTRDR+YGRS+WG+ EF++VDTGGV+ VSKS +M
Sbjct: 168 NVGKSALFNRLVGENRAIVVDEPGVTRDRLYGRSYWGDQEFVVVDTGGVMTVSKSPSGVM 227
Query: 233 EDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGLTAADEE 292
E+L ++TTIGMEGIPL++REAA+ARMPSMIE+QATAA++ES VIIF+VDGQAG + AD E
Sbjct: 228 EELNVSTTIGMEGIPLSSREAAIARMPSMIEKQATAAVDESAVIIFVVDGQAGPSGADVE 287
Query: 293 IADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLPISAISGTGTGELLDLVC 352
IADWLRK Y K+IILAVNKCESPRKG+MQ SEFWSLGF+P+PISA+SGTGTGELLDLVC
Sbjct: 288 IADWLRKYYSHKYIILAVNKCESPRKGLMQASEFWSLGFTPIPISALSGTGTGELLDLVC 347
Query: 353 SELKKV 358
S L K+
Sbjct: 348 SGLIKL 353
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 75/155 (48%), Gaps = 29/155 (18%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGG 220
+P +AI+GRPNVGKS++ N LV +R IV G TRD + F G +F L+DT G
Sbjct: 368 IPAIAIIGRPNVGKSSILNALVREDRTIVSPVSGTTRDAIDA-EFTGPDGEKFRLIDTAG 426
Query: 221 VLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLV 280
+ S ++ G +T EA M +A AI S V+ ++
Sbjct: 427 IRKKS--------------SVASSG---STTEA-------MSVNRAFRAIRRSDVVALVI 462
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCES 315
+ A +T D +IA+ + + K ++ VNK ++
Sbjct: 463 EAMACITEQDLKIAERIERE--GKGCLVVVNKWDT 495
>gi|30682040|ref|NP_187815.2| GTP-binding protein [Arabidopsis thaliana]
gi|209529777|gb|ACI49783.1| At3g12080 [Arabidopsis thaliana]
gi|332641625|gb|AEE75146.1| GTP-binding protein [Arabidopsis thaliana]
Length = 663
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 177/246 (71%), Positives = 214/246 (86%)
Query: 113 LEREAKDAVREYSSLLSRQLIIQDETDDRKDSGKKQKKRKTTIGNVPEHLLPRVAIVGRP 172
LE+EA+D VR+Y++ LSR+L I+DET + K++ +K K+ +PEHLL RVAIVGRP
Sbjct: 108 LEKEARDIVRDYATTLSRELKIEDETIEGKETRRKGKRLAKNTQQIPEHLLQRVAIVGRP 167
Query: 173 NVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIM 232
NVGKSALFNRLVG NRAIVVDEPGVTRDR+YGRS+WG+ EF++VDTGGV+ VSKS +M
Sbjct: 168 NVGKSALFNRLVGENRAIVVDEPGVTRDRLYGRSYWGDQEFVVVDTGGVMTVSKSPSGVM 227
Query: 233 EDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGLTAADEE 292
E+L ++TTIGMEGIPL++REAA+ARMPSMIE+QATAA++ES VIIF+VDGQAG + AD E
Sbjct: 228 EELNVSTTIGMEGIPLSSREAAIARMPSMIEKQATAAVDESAVIIFVVDGQAGPSGADVE 287
Query: 293 IADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLPISAISGTGTGELLDLVC 352
IADWLRK Y K+IILAVNKCESPRKG+MQ SEFWSLGF+P+PISA+SGTGTGELLDLVC
Sbjct: 288 IADWLRKYYSHKYIILAVNKCESPRKGLMQASEFWSLGFTPIPISALSGTGTGELLDLVC 347
Query: 353 SELKKV 358
S L K+
Sbjct: 348 SGLIKL 353
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 75/155 (48%), Gaps = 29/155 (18%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGG 220
+P +AI+GRPNVGKS++ N LV +R IV G TRD + F G +F L+DT G
Sbjct: 368 IPAIAIIGRPNVGKSSILNALVREDRTIVSPVSGTTRDAIDA-EFTGPDGEKFRLIDTAG 426
Query: 221 VLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLV 280
+ S ++ G +T EA M +A AI S V+ ++
Sbjct: 427 IRKKS--------------SVASSG---STTEA-------MSVNRAFRAIRRSDVVALVI 462
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCES 315
+ A +T D +IA+ + + K ++ VNK ++
Sbjct: 463 EAMACITEQDLKIAERIERE--GKGCLVVVNKWDT 495
>gi|414591757|tpg|DAA42328.1| TPA: hypothetical protein ZEAMMB73_012049 [Zea mays]
Length = 653
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 172/255 (67%), Positives = 221/255 (86%), Gaps = 5/255 (1%)
Query: 107 GIDVDALEREAKDAVREYSSLLSRQLIIQDETDDRKDSGKKQKKRKTTIG-NVPEHLLPR 165
++V+A+E EA+ A + + L+R+L I D+ +++ + + KT++ ++P++LLP+
Sbjct: 99 AMNVEAMEEEARGAAADLAKRLARELHIDDDVREKR----RNIRDKTSVSKHIPDNLLPK 154
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAI+GRPNVGKSALFNRLVGGNRAIVVDEPGVTRDR+YGRS+WG+HEFM++DTGGV+ +S
Sbjct: 155 VAIIGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRLYGRSYWGDHEFMVIDTGGVITLS 214
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
KSQ +ME+LA+TTT+GM+GIPLATREAA+ARMPSMIE+QA AA++E+ VI+F+VDGQAG
Sbjct: 215 KSQAGVMEELAVTTTVGMDGIPLATREAAIARMPSMIEKQAVAAVDEASVILFVVDGQAG 274
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLPISAISGTGTG 345
L AAD EI+DWLR+NY DK I+LAVNKCESPRKG MQ +FWSLGFSPLPISAI+GTGTG
Sbjct: 275 LVAADIEISDWLRRNYSDKCILLAVNKCESPRKGQMQALDFWSLGFSPLPISAITGTGTG 334
Query: 346 ELLDLVCSELKKVEV 360
+LLDLVCSEL+K EV
Sbjct: 335 DLLDLVCSELRKFEV 349
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 27/154 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHE-FMLVDTGGV 221
+P +AIVGRPNVGKS++ N LVG +R IV G TRD + + E + L+DT G+
Sbjct: 360 VPAIAIVGRPNVGKSSILNALVGEDRTIVSPVSGTTRDAIDTEFTTADGEKYKLIDTAGI 419
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ + ++ + T ++ + ++A AI S V+ +++
Sbjct: 420 ----RRRTAVISAGSTTESLSV--------------------KRAFRAIRRSDVVALVIE 455
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCES 315
A +T D +IA+ + K K ++ VNK ++
Sbjct: 456 AMACVTEQDYKIAERIEKE--GKACVIVVNKWDT 487
>gi|226503143|ref|NP_001146320.1| uncharacterized protein LOC100279896 [Zea mays]
gi|219886617|gb|ACL53683.1| unknown [Zea mays]
Length = 653
Score = 369 bits (947), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 171/255 (67%), Positives = 220/255 (86%), Gaps = 5/255 (1%)
Query: 107 GIDVDALEREAKDAVREYSSLLSRQLIIQDETDDRKDSGKKQKKRKTTIG-NVPEHLLPR 165
++V+A+E EA+ A + + L+R+L I D+ +++ + + KT++ ++P++LLP+
Sbjct: 99 AMNVEAMEEEARGAAADLAKRLARELHIDDDVREKR----RNIRDKTSVSKHIPDNLLPK 154
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAI+GRPNVGKSALFNRLVGGNRAIVVDEPGVTRDR+YGRS+WG+HEFM++DTGGV+ +S
Sbjct: 155 VAIIGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRLYGRSYWGDHEFMVIDTGGVITLS 214
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
KSQ +ME+LA+TTT+GM+GIP ATREAA+ARMPSMIE+QA AA++E+ VI+F+VDGQAG
Sbjct: 215 KSQAGVMEELAVTTTVGMDGIPFATREAAIARMPSMIEKQAVAAVDEASVILFVVDGQAG 274
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLPISAISGTGTG 345
L AAD EI+DWLR+NY DK I+LAVNKCESPRKG MQ +FWSLGFSPLPISAI+GTGTG
Sbjct: 275 LVAADIEISDWLRRNYSDKCILLAVNKCESPRKGQMQALDFWSLGFSPLPISAITGTGTG 334
Query: 346 ELLDLVCSELKKVEV 360
+LLDLVCSEL+K EV
Sbjct: 335 DLLDLVCSELRKFEV 349
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 27/154 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHE-FMLVDTGGV 221
+P +AIVGRPNVGKS++ N LVG +R IV G TRD + + E + L+DT G+
Sbjct: 360 VPAIAIVGRPNVGKSSILNALVGEDRTIVSPVSGTTRDAIDTEFTTADGEKYKLIDTAGI 419
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ + ++ + T ++ + ++A AI S V+ +++
Sbjct: 420 ----RRRTAVISAGSTTESLSV--------------------KRAFRAIRRSDVVALVIE 455
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCES 315
A +T D +IA+ + K K ++ VNK ++
Sbjct: 456 AMACVTEQDYKIAERIEKE--GKACVIVVNKWDT 487
>gi|12322014|gb|AAG51052.1|AC069473_14 GTPase, putative; 34281-30152 [Arabidopsis thaliana]
Length = 659
Score = 368 bits (944), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 175/246 (71%), Positives = 213/246 (86%), Gaps = 4/246 (1%)
Query: 113 LEREAKDAVREYSSLLSRQLIIQDETDDRKDSGKKQKKRKTTIGNVPEHLLPRVAIVGRP 172
LE+EA+D VR+Y++ LSR+L I+DET + K++ +K K+ + +HLL RVAIVGRP
Sbjct: 108 LEKEARDIVRDYATTLSRELKIEDETIEGKETRRKGKRLAKNV----KHLLQRVAIVGRP 163
Query: 173 NVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIM 232
NVGKSALFNRLVG NRAIVVDEPGVTRDR+YGRS+WG+ EF++VDTGGV+ VSKS +M
Sbjct: 164 NVGKSALFNRLVGENRAIVVDEPGVTRDRLYGRSYWGDQEFVVVDTGGVMTVSKSPSGVM 223
Query: 233 EDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGLTAADEE 292
E+L ++TTIGMEGIPL++REAA+ARMPSMIE+QATAA++ES VIIF+VDGQAG + AD E
Sbjct: 224 EELNVSTTIGMEGIPLSSREAAIARMPSMIEKQATAAVDESAVIIFVVDGQAGPSGADVE 283
Query: 293 IADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLPISAISGTGTGELLDLVC 352
IADWLRK Y K+IILAVNKCESPRKG+MQ SEFWSLGF+P+PISA+SGTGTGELLDLVC
Sbjct: 284 IADWLRKYYSHKYIILAVNKCESPRKGLMQASEFWSLGFTPIPISALSGTGTGELLDLVC 343
Query: 353 SELKKV 358
S L K+
Sbjct: 344 SGLIKL 349
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 75/155 (48%), Gaps = 29/155 (18%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGG 220
+P +AI+GRPNVGKS++ N LV +R IV G TRD + F G +F L+DT G
Sbjct: 364 IPAIAIIGRPNVGKSSILNALVREDRTIVSPVSGTTRDAIDA-EFTGPDGEKFRLIDTAG 422
Query: 221 VLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLV 280
+ S ++ G +T EA M +A AI S V+ ++
Sbjct: 423 IRKKS--------------SVASSG---STTEA-------MSVNRAFRAIRRSDVVALVI 458
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCES 315
+ A +T D +IA+ + + K ++ VNK ++
Sbjct: 459 EAMACITEQDLKIAERIERE--GKGCLVVVNKWDT 491
>gi|224106171|ref|XP_002314070.1| predicted protein [Populus trichocarpa]
gi|222850478|gb|EEE88025.1| predicted protein [Populus trichocarpa]
Length = 489
Score = 360 bits (925), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 180/204 (88%), Positives = 194/204 (95%)
Query: 157 NVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLV 216
+P+HLLP+VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDR+YGRSFWGEHEFM+V
Sbjct: 1 QIPDHLLPKVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRLYGRSFWGEHEFMVV 60
Query: 217 DTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVI 276
DTGGV+ VSKSQ N+MEDLAI+TTIGM+GIPLA+REAAVARMPSMIE+QATAA+EES VI
Sbjct: 61 DTGGVVTVSKSQANVMEDLAISTTIGMDGIPLASREAAVARMPSMIEKQATAAVEESSVI 120
Query: 277 IFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLPI 336
IFLVDGQAGLTAAD EIADWLR+NY +K IILAVNKCESPRKGIMQ SEFWSLGFSPLPI
Sbjct: 121 IFLVDGQAGLTAADVEIADWLRRNYSNKCIILAVNKCESPRKGIMQASEFWSLGFSPLPI 180
Query: 337 SAISGTGTGELLDLVCSELKKVEV 360
SAISGTGTGELLDLVCS L KVEV
Sbjct: 181 SAISGTGTGELLDLVCSRLGKVEV 204
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 80/177 (45%), Gaps = 37/177 (20%)
Query: 157 NVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFM 214
N E +P +AIVGRPNVGKS++ N LVG +R IV G TRD + F G +F+
Sbjct: 209 NEEETYIPAIAIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAI-DTEFVGPDGQKFL 267
Query: 215 LVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIE----RQATAAI 270
L+DT G+ R AAVA S+ E +A I
Sbjct: 268 LIDTAGI----------------------------RRRAAVASSGSVTEALSVNRAFRGI 299
Query: 271 EESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFW 327
S V+ +++ A +T D IA+ + K K ++ VNK ++ Q + ++
Sbjct: 300 RRSDVVALVIEAMACITEQDYRIAERIEKE--GKGCLIVVNKWDTIPNKNQQTATYY 354
>gi|242069257|ref|XP_002449905.1| hypothetical protein SORBIDRAFT_05g025430 [Sorghum bicolor]
gi|241935748|gb|EES08893.1| hypothetical protein SORBIDRAFT_05g025430 [Sorghum bicolor]
Length = 684
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 172/279 (61%), Positives = 219/279 (78%), Gaps = 30/279 (10%)
Query: 107 GIDVDALEREAKDAVREYSSLLSRQLIIQDETDDRKDSGKKQKKRKTTIG-NVPEHLLPR 165
+DV+ALE EA+ A + + L+R+L I D+ +++ + + KT++ ++P++LLP+
Sbjct: 105 AMDVEALEEEARGAAADLAKRLARELHIDDDVREKR----RNIRDKTSVSKHIPDNLLPK 160
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAI+GRPNVGKSALFNRLVGGNRAIVVDEPGVTRDR+YGRS+WG+ EFM++DTGGV+ +S
Sbjct: 161 VAIIGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRLYGRSYWGDQEFMVIDTGGVITLS 220
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG--- 282
KSQ +ME+LA+TTT+GM+GIPLATREAA+ARMPSMIE+QA AA++E+ VI+F+VDG
Sbjct: 221 KSQAGVMEELAVTTTVGMDGIPLATREAAIARMPSMIEKQAVAAVDEASVILFVVDGQAE 280
Query: 283 ----------------------QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI 320
QAGL AAD EI+DWLR+NY DK +ILAVNKCESPRKG
Sbjct: 281 IVVLIISYVSSVFTSIMVPNIFQAGLVAADIEISDWLRRNYSDKCVILAVNKCESPRKGQ 340
Query: 321 MQVSEFWSLGFSPLPISAISGTGTGELLDLVCSELKKVE 359
MQ +FWSLGFSPLPISAI+GTGTG+LLDLVCSEL+K E
Sbjct: 341 MQALDFWSLGFSPLPISAITGTGTGDLLDLVCSELRKFE 379
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 75/161 (46%), Gaps = 35/161 (21%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHE-FMLVDT 218
++ +P +AIVGRPNVGKS++ N LVG +R IV G TRD + + E + L+DT
Sbjct: 388 KNKVPAIAIVGRPNVGKSSILNALVGEDRTIVSPVSGTTRDAIDTEFTTADGEKYKLIDT 447
Query: 219 GGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIE----RQATAAIEESC 274
G+ R AAV S E ++A AI S
Sbjct: 448 AGI----------------------------RRRAAVISAGSTTESLSVKRAFRAIRRSD 479
Query: 275 VIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCES 315
V+ +++ A +T D +IA+ + K K ++ VNK ++
Sbjct: 480 VVALVIEAMACVTEQDYKIAERIEKE--GKACVIVVNKWDT 518
>gi|9294105|dbj|BAB01956.1| GTP-binding protein-like [Arabidopsis thaliana]
Length = 537
Score = 349 bits (896), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 164/224 (73%), Positives = 195/224 (87%)
Query: 135 QDETDDRKDSGKKQKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDE 194
+DET + K++ +K K+ +PEHLL RVAIVGRPNVGKSALFNRLVG NRAIVVDE
Sbjct: 4 EDETIEGKETRRKGKRLAKNTQQIPEHLLQRVAIVGRPNVGKSALFNRLVGENRAIVVDE 63
Query: 195 PGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAA 254
PGVTRDR+YGRS+WG+ EF++VDTGGV+ VSKS +ME+L ++TTIGMEGIPL++REAA
Sbjct: 64 PGVTRDRLYGRSYWGDQEFVVVDTGGVMTVSKSPSGVMEELNVSTTIGMEGIPLSSREAA 123
Query: 255 VARMPSMIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
+ARMPSMIE+QATAA++ES VIIF+VDGQAG + AD EIADWLRK Y K+IILAVNKCE
Sbjct: 124 IARMPSMIEKQATAAVDESAVIIFVVDGQAGPSGADVEIADWLRKYYSHKYIILAVNKCE 183
Query: 315 SPRKGIMQVSEFWSLGFSPLPISAISGTGTGELLDLVCSELKKV 358
SPRKG+MQ SEFWSLGF+P+PISA+SGTGTGELLDLVCS L K+
Sbjct: 184 SPRKGLMQASEFWSLGFTPIPISALSGTGTGELLDLVCSGLIKL 227
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 75/155 (48%), Gaps = 29/155 (18%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGG 220
+P +AI+GRPNVGKS++ N LV +R IV G TRD + F G +F L+DT G
Sbjct: 242 IPAIAIIGRPNVGKSSILNALVREDRTIVSPVSGTTRDAIDA-EFTGPDGEKFRLIDTAG 300
Query: 221 VLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLV 280
+ S ++ G +T EA M +A AI S V+ ++
Sbjct: 301 IRKKS--------------SVASSG---STTEA-------MSVNRAFRAIRRSDVVALVI 336
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCES 315
+ A +T D +IA+ + + K ++ VNK ++
Sbjct: 337 EAMACITEQDLKIAERIERE--GKGCLVVVNKWDT 369
>gi|218186089|gb|EEC68516.1| hypothetical protein OsI_36791 [Oryza sativa Indica Group]
Length = 676
Score = 347 bits (889), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 175/266 (65%), Positives = 215/266 (80%), Gaps = 17/266 (6%)
Query: 108 IDVDALEREAKDAVREYSSLLSRQLIIQDETDDRKDSGKKQKKRKTTIGNVPEHLLPRVA 167
+DV+A+E EA AV + S LSR+L I D+ D++ + + + + ++P++LLPRVA
Sbjct: 109 MDVEAMEEEALGAVADLSERLSRELRIDDDVRDKR---RIIRDKTSASKHIPDNLLPRVA 165
Query: 168 IVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSKS 227
I+GRPNVGKSALFNRLVGGNRAIVVDEPGVTRDR+YGRS+WG+ EFM++DTGGV+ +SKS
Sbjct: 166 IIGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRLYGRSYWGDREFMVIDTGGVITLSKS 225
Query: 228 QPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA--- 284
Q +ME+LAITTT+GM+GIPLA+REAA+ARMPSMIE+QA AA++E+ VI+F+VDGQA
Sbjct: 226 QAGVMEELAITTTVGMDGIPLASREAAIARMPSMIEKQAVAAVDEAAVILFIVDGQAVSY 285
Query: 285 -----------GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP 333
GL AAD EIADWLR+NY DK IILAVNKCESPRKG MQ +FWSLGFSP
Sbjct: 286 LTEWVSKIFQDGLVAADIEIADWLRRNYSDKRIILAVNKCESPRKGQMQALDFWSLGFSP 345
Query: 334 LPISAISGTGTGELLDLVCSELKKVE 359
LPISAI+GTGTGELLD+VCSEL E
Sbjct: 346 LPISAITGTGTGELLDMVCSELSNFE 371
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 76/161 (47%), Gaps = 37/161 (22%)
Query: 161 HLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDT 218
+ +P +AIVGRPNVGKS++ N LVG +R IV G TRD + F E ++ L+DT
Sbjct: 381 NYIPAIAIVGRPNVGKSSILNALVGEDRTIVSPVSGTTRDAI-DTEFTTEDGQKYKLIDT 439
Query: 219 GGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIE----RQATAAIEESC 274
G+ R AAVA S E ++A AI S
Sbjct: 440 AGI----------------------------RRRAAVASAGSTTETLSVKRAFRAIRRSD 471
Query: 275 VIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCES 315
V+ +V+ A +T D +IA+ + K K ++ VNK ++
Sbjct: 472 VVALVVEAMACITEQDYKIAERIEKE--GKACVIVVNKWDT 510
>gi|357155995|ref|XP_003577307.1| PREDICTED: GTPase Der-like [Brachypodium distachyon]
Length = 644
Score = 341 bits (875), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 156/221 (70%), Positives = 193/221 (87%)
Query: 140 DRKDSGKKQKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTR 199
D ++ + + + +T ++P++ LP+VAI+GRPNVGKSALFNRLVG NRAIVVDEPGVTR
Sbjct: 119 DVREKRRTMRDKTSTSKHIPDNNLPKVAIIGRPNVGKSALFNRLVGSNRAIVVDEPGVTR 178
Query: 200 DRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMP 259
DR+YGRS+WG+ EFM++DTGGV+ +SKSQ +ME+LAITTT+GM+GIPLA+REAA+ARMP
Sbjct: 179 DRLYGRSYWGDQEFMVIDTGGVITLSKSQAGVMEELAITTTVGMDGIPLASREAAIARMP 238
Query: 260 SMIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKG 319
SMIE+QA AA+EE+ V++FLVDGQAGL AAD EIADWLR+N+ K IILAVNKCESP+KG
Sbjct: 239 SMIEKQAVAAVEEATVLLFLVDGQAGLVAADIEIADWLRRNFSHKCIILAVNKCESPKKG 298
Query: 320 IMQVSEFWSLGFSPLPISAISGTGTGELLDLVCSELKKVEV 360
MQ EFWSLGF+P+ ISAI+GTGTGELLD+VCSELK EV
Sbjct: 299 QMQALEFWSLGFTPVSISAITGTGTGELLDMVCSELKNFEV 339
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 78/162 (48%), Gaps = 37/162 (22%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVD 217
E+ +P ++IVGRPNVGKS++ N LVG +R IV G TRD + F E +F L+D
Sbjct: 351 ENRVPAISIVGRPNVGKSSILNALVGEDRTIVSPVSGTTRDAI-DTEFTTEDGQKFKLID 409
Query: 218 TGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIE----RQATAAIEES 273
T G+ R AAVA S E ++A +AI S
Sbjct: 410 TAGI----------------------------RRRAAVASAGSTTETLSVKRAFSAIRRS 441
Query: 274 CVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCES 315
V+ +V+ A +T D +IA+ + K K ++ VNK ++
Sbjct: 442 DVVALVVEAMACVTEQDYKIAERIEKE--GKACVIVVNKWDT 481
>gi|297746328|emb|CBI16384.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 341 bits (875), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 174/263 (66%), Positives = 199/263 (75%), Gaps = 35/263 (13%)
Query: 99 DESDGQDFGIDVDALEREAKDAVREYSSLLSRQLIIQ-DETDDRKDSGKKQKKRKTTIGN 157
+E + + +DVDALE EAK AVREYS LSRQL I+ D ++ K G KQKK K+T N
Sbjct: 121 EEVANRSYSLDVDALEEEAKHAVREYSRFLSRQLSIEEDGANELKGRGGKQKKSKSTTRN 180
Query: 158 V-PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLV 216
V P+HLLPRV IVGRPNVGKSALFNRLVGGN+AIVVDEPGVTRDR+YGR+FWG++EFM++
Sbjct: 181 VIPDHLLPRVTIVGRPNVGKSALFNRLVGGNKAIVVDEPGVTRDRLYGRAFWGDYEFMVI 240
Query: 217 DTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVI 276
DTGGVL +SKSQ N +QATAAIEES VI
Sbjct: 241 DTGGVLTISKSQDN---------------------------------KQATAAIEESSVI 267
Query: 277 IFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLPI 336
IFLVDGQAGL+AAD EIADWLRKNY +K I+LAVNKCESP+KGIMQ EFWSLGF+PLPI
Sbjct: 268 IFLVDGQAGLSAADVEIADWLRKNYSNKCIVLAVNKCESPKKGIMQALEFWSLGFTPLPI 327
Query: 337 SAISGTGTGELLDLVCSELKKVE 359
SA+SGTGTGELLDLVCS LKK+E
Sbjct: 328 SAVSGTGTGELLDLVCSGLKKIE 350
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 90/198 (45%), Gaps = 47/198 (23%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVD 217
E+ +P +AIVGRPNVGKS++ N LVG +R IV G TRD + F G ++ L+D
Sbjct: 359 ENYVPAIAIVGRPNVGKSSILNALVGEDRTIVSPVSGTTRDAI-DTEFTGPDGQKYRLID 417
Query: 218 TGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIE----RQATAAIEES 273
T G+ R AAVA S E +A AI S
Sbjct: 418 TAGI----------------------------RRRAAVASSGSTTEALSVNRAFRAIRRS 449
Query: 274 CVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS----- 328
V+ +++ A +T D IA+ + + K ++ VNK ++ Q + ++
Sbjct: 450 DVVALVIEAMACITEQDYRIAERIERE--GKGCLIVVNKWDTIPNKNQQTATYYEQDVRE 507
Query: 329 ----LGFSPLPIS-AISG 341
LG++P+ S AI+G
Sbjct: 508 KLRVLGWAPIVYSTAIAG 525
>gi|168035467|ref|XP_001770231.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678448|gb|EDQ64906.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 542
Score = 258 bits (658), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 127/200 (63%), Positives = 156/200 (78%), Gaps = 5/200 (2%)
Query: 158 VPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVD 217
+P+ LLP++AIVGRPNVGKSALFNR+ GG+ AIV DE GVTRDR+Y R+FW HEFMLVD
Sbjct: 30 IPDALLPKIAIVGRPNVGKSALFNRIAGGDIAIVHDEAGVTRDRLYTRAFWSTHEFMLVD 89
Query: 218 TGGVLNVSKSQPNIMED-LAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVI 276
TGGVL + P D +A+T G E + A +EA A +P+MIE+QA AA+ + I
Sbjct: 90 TGGVLTI----PGDGSDAVAVTAPGGEEAVAKAIKEAYDAGLPAMIEKQAGAAVSSADSI 145
Query: 277 IFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLPI 336
IF+VDGQAGLTAAD +IA+WLRK + +K I LAVNKCESP KG +QV+EFW+LGF+P+P+
Sbjct: 146 IFVVDGQAGLTAADIDIANWLRKKHSNKKITLAVNKCESPTKGQLQVAEFWTLGFTPVPV 205
Query: 337 SAISGTGTGELLDLVCSELK 356
SAISGTGTG LLDLVC LK
Sbjct: 206 SAISGTGTGNLLDLVCEGLK 225
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 74/167 (44%), Gaps = 36/167 (21%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+AIVG+PNVGKS++ N LVG R IV G TRD + + EF D G
Sbjct: 241 IAIVGKPNVGKSSILNALVGEERTIVSPVSGTTRDAI-------DTEF--ADDNG----- 286
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVA----RMPSMIERQATAAIEESCVIIFLVD 281
+ L + T G+ R AVA R S+ +A AI S V+ ++D
Sbjct: 287 -------QTLKLIDTAGIR------RRGAVASAGSRAESLSVNRAFRAIRRSDVVALVID 333
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCES-PRKGIMQVSEFW 327
+T D + + + + K I+ VNK ++ P K M S W
Sbjct: 334 ALDCVTEQDFRLGERIARE--GKACIIVVNKWDTIPNKDAM--STVW 376
>gi|302808277|ref|XP_002985833.1| hypothetical protein SELMODRAFT_123195 [Selaginella moellendorffii]
gi|300146340|gb|EFJ13010.1| hypothetical protein SELMODRAFT_123195 [Selaginella moellendorffii]
Length = 492
Score = 234 bits (597), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 117/201 (58%), Positives = 152/201 (75%), Gaps = 7/201 (3%)
Query: 157 NVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLV 216
VP HLLP+VAIVGRPNVGKSALFNR+VG N AIV DEPGVTRDR+YGR EFML+
Sbjct: 3 QVPSHLLPKVAIVGRPNVGKSALFNRIVGRNMAIVHDEPGVTRDRLYGRVRGSVQEFMLI 62
Query: 217 DTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVI 276
DTGGVL + S + + ++ A ++AA A +PSMIE+QA +A+EE+C +
Sbjct: 63 DTGGVLTIPTSAESGLAGGSVAAA-------QAKKDAAAAGLPSMIEQQAASAVEEACAL 115
Query: 277 IFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLPI 336
+F+VDGQAGLT+AD EI +WLR+ + K I LAVNKCESP+KG++Q +EFWSLGF+P+P+
Sbjct: 116 VFVVDGQAGLTSADIEIGNWLRRKFKHKKIALAVNKCESPKKGLLQAAEFWSLGFTPVPV 175
Query: 337 SAISGTGTGELLDLVCSELKK 357
SAISG+G +LL+ V S +K+
Sbjct: 176 SAISGSGVPDLLEDVTSAIKE 196
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 68/155 (43%), Gaps = 35/155 (22%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHE-FMLVDTGGVLNV 224
VAI+GRPNVGKS++ N +VG R IV G TRD + E + F L+DT G+
Sbjct: 212 VAIIGRPNVGKSSILNAIVGKERTIVSPVSGTTRDAIDTEVTGPEGKVFRLIDTAGI--- 268
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVA----RMPSMIERQATAAIEESCVIIFLV 280
+ AA+A + S+ + A AI + V+ ++
Sbjct: 269 -------------------------RKRAAIASGGSKTESLCVQSALRAIRRADVVALVI 303
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCES 315
+ T D + + + K+ K I+ VNK ++
Sbjct: 304 EAMTCATEQDYRLGERIEKD--GKACIIVVNKWDT 336
>gi|302806046|ref|XP_002984773.1| hypothetical protein SELMODRAFT_121150 [Selaginella moellendorffii]
gi|300147359|gb|EFJ14023.1| hypothetical protein SELMODRAFT_121150 [Selaginella moellendorffii]
Length = 490
Score = 234 bits (596), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 119/201 (59%), Positives = 152/201 (75%), Gaps = 7/201 (3%)
Query: 157 NVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLV 216
VP HLLP+VAIVGRPNVGKSALFNR+VG N AIV DEPGVTRDR+YGR EFML+
Sbjct: 1 QVPSHLLPKVAIVGRPNVGKSALFNRIVGRNMAIVHDEPGVTRDRLYGRVRGSVQEFMLI 60
Query: 217 DTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVI 276
DTGGVL + S + + G A ++AAVA +PSMIE+QA +A+EE+C +
Sbjct: 61 DTGGVLTIPTSAESGLAG-------GSVAAAQAKKDAAVAGLPSMIEQQAASAVEEACAL 113
Query: 277 IFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLPI 336
+F+VDGQAGLT+AD EI +WLR+ + K I LAVNKCESP+KG++Q +EFWSLGF+P+P+
Sbjct: 114 VFVVDGQAGLTSADIEIGNWLRRKFKHKKIALAVNKCESPKKGLLQAAEFWSLGFTPVPV 173
Query: 337 SAISGTGTGELLDLVCSELKK 357
SAISG+G +LL+ V S +K+
Sbjct: 174 SAISGSGVPDLLEDVTSAIKE 194
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 68/155 (43%), Gaps = 35/155 (22%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHE-FMLVDTGGVLNV 224
VAI+GRPNVGKS++ N +VG R IV G TRD + E + F L+DT G+
Sbjct: 210 VAIIGRPNVGKSSILNAIVGKERTIVSPVSGTTRDAIDTEVAGPEGKVFRLIDTAGI--- 266
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVA----RMPSMIERQATAAIEESCVIIFLV 280
+ AA+A + S+ + A AI + V+ ++
Sbjct: 267 -------------------------RKRAAIASGGSKTESLCVQSALRAIRRADVVALVI 301
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCES 315
+ T D + + + K+ K I+ VNK ++
Sbjct: 302 EAMTCATEQDYRLGERIEKD--GKACIIVVNKWDT 334
>gi|145351972|ref|XP_001420333.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580567|gb|ABO98626.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 555
Score = 224 bits (571), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 119/216 (55%), Positives = 145/216 (67%), Gaps = 17/216 (7%)
Query: 141 RKDSGKKQKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRD 200
R D+ ++K R+ VP+ LPRVA+VGRPNVGKSALFNRL G RAIV DEPGVTRD
Sbjct: 65 RADARVRRKTRRD-WSKVPDEALPRVAVVGRPNVGKSALFNRLTGTKRAIVYDEPGVTRD 123
Query: 201 RMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPS 260
RMY R++WGEHEFM+VDTGG+ N+ + EG P V +P
Sbjct: 124 RMYVRAYWGEHEFMMVDTGGLENLPANP---------------EGGPKTDTVGGVEILPG 168
Query: 261 MIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI 320
MIE QA A+ E+ V+IF+VDGQ GLTAAD +I WLR+ + + LAVNKCES KG
Sbjct: 169 MIEAQAAEAVREASVLIFVVDGQVGLTAADMDIFAWLRRTHSKIPLHLAVNKCESTTKGE 228
Query: 321 MQVSEFWSLG-FSPLPISAISGTGTGELLDLVCSEL 355
Q+ EFWSLG +PL +SAISGTGTGELLD +C+ L
Sbjct: 229 DQILEFWSLGDVTPLAVSAISGTGTGELLDNMCATL 264
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 75/161 (46%), Gaps = 29/161 (18%)
Query: 157 NVPEHLLP-RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRM--YGRSFWGEHEF 213
N E +P VAI+GRPNVGKS+L N L G R+IV D G TRD + + +F
Sbjct: 275 NAEEEDIPVTVAIIGRPNVGKSSLLNGLAGEARSIVSDFSGTTRDSIDTLVEDKYTGRKF 334
Query: 214 MLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEES 273
L+DT G+ ++Q D A ++G +A A++ +
Sbjct: 335 TLIDTAGIRR--RTQVKSGTDGAEKLSVG----------------------RALQAMKRA 370
Query: 274 CVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
V++ ++DG G + D +A+ R I+L +NK +
Sbjct: 371 DVVVLVIDGTEGPSQQDFVLAE--RATQEGCAIVLCINKWD 409
>gi|412987790|emb|CCO19186.1| GTP-binding protein EngA [Bathycoccus prasinos]
Length = 816
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 115/203 (56%), Positives = 138/203 (67%), Gaps = 18/203 (8%)
Query: 156 GNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFML 215
G +P+ LLP+VA+VGRPNVGKSALFNRL G RAIV DEPGVTRDRMY R+FWG+HEFML
Sbjct: 308 GTIPQELLPKVAVVGRPNVGKSALFNRLTGTKRAIVFDEPGVTRDRMYVRAFWGDHEFML 367
Query: 216 VDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCV 275
VDTGG+ N+ PN P R V +P MIE QA A+ E+ V
Sbjct: 368 VDTGGLENLP-GDPN--------------AAPSIDRIGGVEILPGMIEAQAAEAVREADV 412
Query: 276 IIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSL---GFS 332
+IF+ DGQ+GLTAAD+EI WLRK++ D + LAVNKCES +G V +FW L +
Sbjct: 413 LIFVTDGQSGLTAADKEIFRWLRKHHADIPVHLAVNKCESSTRGEEMVLDFWQLSSKSVA 472
Query: 333 PLPISAISGTGTGELLDLVCSEL 355
P+ +SAISGTGTGELLD VC L
Sbjct: 473 PIGVSAISGTGTGELLDAVCESL 495
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 66/134 (49%), Gaps = 18/134 (13%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEH---EFMLVDTGGV 221
+VAIVGRPNVGKS+L N L G R+IV D G TRD + H EF L+DT G+
Sbjct: 522 QVAIVGRPNVGKSSLLNGLAGTPRSIVSDFSGTTRDTIDTDVVDKNHPDREFTLIDTAGI 581
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ + I D + +I E + ++ R A A++ + V++ ++D
Sbjct: 582 ----RRRTQIKRD---SKSIKGEEKKFGLEQQSIGR--------ALQAMKRADVVVLVID 626
Query: 282 GQAGLTAADEEIAD 295
G T D +A+
Sbjct: 627 ATEGATQQDFVLAE 640
>gi|308809447|ref|XP_003082033.1| GTP-binding protein-like (ISS) [Ostreococcus tauri]
gi|116060500|emb|CAL55836.1| GTP-binding protein-like (ISS) [Ostreococcus tauri]
Length = 500
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 112/194 (57%), Positives = 137/194 (70%), Gaps = 16/194 (8%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LPRVA+VGRPNVGKSALFNRL G RAIV DEPGVTRDRMY RS+WGE EFM+VDTGG
Sbjct: 29 LPRVAVVGRPNVGKSALFNRLTGTKRAIVYDEPGVTRDRMYTRSYWGESEFMMVDTGGFE 88
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
N+ ++ EG P R V +P+MIE QA A++E+ V++F+VDG
Sbjct: 89 NLPRNP---------------EGAPKIDRVGGVEILPAMIEAQAAEAVKEAAVLVFVVDG 133
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLG-FSPLPISAISG 341
Q GLT AD +I WLR+++ DK + LAVNKCES KG Q+ +FW LG +PL +SAISG
Sbjct: 134 QVGLTEADRDIYRWLRRSHSDKPLHLAVNKCESTTKGEEQIIDFWQLGDVTPLAVSAISG 193
Query: 342 TGTGELLDLVCSEL 355
TGTG+LLD VC+ L
Sbjct: 194 TGTGDLLDNVCATL 207
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 38/59 (64%), Gaps = 4/59 (6%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTR---DRMYGRSFWGEHEFMLVDTGGV 221
+AI+GRPNVGKS+L N L G R+IV D G TR D M + G+ ++ L+DT G+
Sbjct: 229 LAIIGRPNVGKSSLLNGLAGEMRSIVSDFSGTTRDSIDTMVEDKYTGK-KYTLIDTAGI 286
>gi|303284441|ref|XP_003061511.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456841|gb|EEH54141.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 470
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 107/198 (54%), Positives = 136/198 (68%), Gaps = 18/198 (9%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LPRVAIVGRPNVGKSALFNRL G RAIV D+PG+TRDRMY R+FWG+ EFM+VDTGG+
Sbjct: 3 LPRVAIVGRPNVGKSALFNRLTGTKRAIVYDQPGITRDRMYVRAFWGDSEFMMVDTGGL- 61
Query: 223 NVSKSQP-NIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+S P N ++ G E +P MIE QA A+ E+ ++ +VD
Sbjct: 62 ---ESLPGNPGAAPSVDAVGGFE------------ILPGMIESQAALAVREAASLVMVVD 106
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSL-GFSPLPISAIS 340
GQ GLT AD +I W+RKN+ DK ++LAVNKCES +G QV +FWSL G +PL +SAIS
Sbjct: 107 GQTGLTTADVDIYRWIRKNHADKPLVLAVNKCESTTRGEEQVLDFWSLGGVTPLAVSAIS 166
Query: 341 GTGTGELLDLVCSELKKV 358
GTGTG+++D +C+ L V
Sbjct: 167 GTGTGDMMDQLCATLPAV 184
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 50/84 (59%), Gaps = 13/84 (15%)
Query: 139 DDRKDSGKKQKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVT 198
DD K+SG++ V E L +VAIVGRPNVGKS+L N+L G RAIV D G T
Sbjct: 187 DDEKESGEE----------VAEPL--KVAIVGRPNVGKSSLLNQLSGDARAIVSDHSGTT 234
Query: 199 RDRMYGRSFWGE-HEFMLVDTGGV 221
RD + + ++F L+DT G+
Sbjct: 235 RDTIDSDVTDADGNKFTLIDTAGI 258
>gi|384253172|gb|EIE26647.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coccomyxa subellipsoidea C-169]
Length = 610
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 110/230 (47%), Positives = 151/230 (65%), Gaps = 28/230 (12%)
Query: 145 GKKQKKRKTTIGNVPEHL------LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVT 198
KK K+ + G++P LP+VAIVGRPNVGKSALFNR+ G N AIV D PGVT
Sbjct: 110 AKKSKRTREARGSIPTDNGIPLADLPKVAIVGRPNVGKSALFNRITGSNLAIVYDYPGVT 169
Query: 199 RDRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIP----------- 247
RDR+Y R+ WG +F++VDTGG+++ + P+ +AI + G+P
Sbjct: 170 RDRLYTRASWGATDFVVVDTGGLMSDASQLPSDQRIVAIKA-LSDAGLPQARICTQFTLS 228
Query: 248 --LATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKF 305
L TR+A IERQA AA+ E+ I+ ++DGQ GLTAADEEI WLR+++ +K
Sbjct: 229 LHLHTRKA--------IERQAAAAVAEANSIVLVMDGQLGLTAADEEIVSWLRRSHPNKP 280
Query: 306 IILAVNKCESPRKGIMQVSEFWSLGFSPLPISAISGTGTGELLDLVCSEL 355
+ LA+NKCE+P+K +QVSEFW+LG P+ +SAISGTGTGEL++ + + L
Sbjct: 281 VHLAINKCENPQKADLQVSEFWALGLEPIAVSAISGTGTGELMEQLMASL 330
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRM-YGRSFWGEHEFMLVDTGGV 221
VAI+GRPNVGKS+L N L G R+IV G TRD + F L+DT G+
Sbjct: 348 VAIIGRPNVGKSSLLNSLAGEERSIVSAISGTTRDAIDTDVKLADGRRFKLIDTAGI 404
>gi|159479670|ref|XP_001697913.1| hypothetical protein CHLREDRAFT_120661 [Chlamydomonas reinhardtii]
gi|158274011|gb|EDO99796.1| predicted protein [Chlamydomonas reinhardtii]
Length = 446
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 94/190 (49%), Positives = 120/190 (63%), Gaps = 29/190 (15%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKSALFNR+ G + A+V D+PGVTRDR+Y R+FWG+ EF+++DTGG+++ +
Sbjct: 1 VAIVGRPNVGKSALFNRIAGASVAVVFDQPGVTRDRLYTRAFWGDKEFVMIDTGGLMSDA 60
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
P P IERQA A + E+ +I LVDGQAG
Sbjct: 61 TRLP-----------------------------PDAIERQAAAGVAEADTVILLVDGQAG 91
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLPISAISGTGTG 345
L DEEI WLR N+ K ++LAVNKCE+ K V+EFWS G P +SAISGTGTG
Sbjct: 92 LQPGDEEILSWLRSNHPSKSLLLAVNKCENVAKADQMVAEFWSTGLEPHAVSAISGTGTG 151
Query: 346 ELLDLVCSEL 355
E+LD++ L
Sbjct: 152 EMLDVLAKML 161
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 31/152 (20%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGR-SFWGEHEFMLVDTGGVLNV 224
VAIVGRPNVGKS+L N + G R+IV D G TRD + + + + L+DT G+
Sbjct: 179 VAIVGRPNVGKSSLLNAIAGEERSIVCDMSGTTRDAVDTKVTLPTGKKLTLIDTAGIRKR 238
Query: 225 SK--SQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
S+ P+ E +++ +A A+ + V + ++D
Sbjct: 239 SRVADSPDGAEQISVD--------------------------RAMRAVRRADVAVLVIDA 272
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
G+T D +++ K +++ VNK +
Sbjct: 273 VEGITQQDFRLSELFAAE--GKAVVVVVNKWD 302
>gi|428219482|ref|YP_007103947.1| GTP-binding protein engA [Pseudanabaena sp. PCC 7367]
gi|427991264|gb|AFY71519.1| GTP-binding protein engA [Pseudanabaena sp. PCC 7367]
Length = 454
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/194 (52%), Positives = 122/194 (62%), Gaps = 32/194 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKSA NRL G AIV D+PGVTRDR Y R+FW +HEF +VDTGG+
Sbjct: 3 LPIVAIVGRPNVGKSAFVNRLAGQQDAIVYDQPGVTRDRTYRRAFWRDHEFNVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ ED E +PL I +QA AI +S +IF+VDG
Sbjct: 62 --------VFED-------NTEFLPL-------------IRQQALLAISQSQAVIFMVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q GLTAADE+IADWLR+ + I++AVNKCESP G+ Q +EFW LG P PIS I G
Sbjct: 94 QDGLTAADEQIADWLRQQNIP--ILVAVNKCESPDLGLSQAAEFWELGIGEPFPISGIHG 151
Query: 342 TGTGELLDLVCSEL 355
GTGELLD++ L
Sbjct: 152 NGTGELLDILVQHL 165
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 92/198 (46%), Gaps = 41/198 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS+L N +G R+IV G TRD + + G+ ++ L+DT G+
Sbjct: 179 KIAIIGRPNVGKSSLLNAFLGEQRSIVSPIAGTTRDAIDTQVIRGDRKYRLIDTAGI--- 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIE-RQATAAIEESCVIIFLVDGQ 283
R+ +V P +A AI S V++ ++D
Sbjct: 236 -------------------------RRKRSVNYGPEFFGINRAFKAINRSDVVLMVIDAL 270
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPR-KGIMQVSEF--------WSLGFSPL 334
G+T D+++A R + I+ VNK ++ K + E+ + L ++PL
Sbjct: 271 EGVTDQDQKLAH--RAVEEGRGCIIVVNKWDAVEDKDSYTIYEYTEKVRSQLYFLDYAPL 328
Query: 335 P-ISAISGTGTGELLDLV 351
+SA++G ++LD V
Sbjct: 329 IFVSALTGQRVAKILDQV 346
>gi|255086559|ref|XP_002509246.1| predicted protein [Micromonas sp. RCC299]
gi|226524524|gb|ACO70504.1| predicted protein [Micromonas sp. RCC299]
Length = 468
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 102/185 (55%), Positives = 124/185 (67%), Gaps = 16/185 (8%)
Query: 172 PNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNI 231
PNVGKSALFNRL G RAIV D+PGVTRDRMY R+FWG+ EFM+VDTGG+ +S P
Sbjct: 8 PNVGKSALFNRLTGTKRAIVYDQPGVTRDRMYIRAFWGDTEFMMVDTGGL----ESLPGS 63
Query: 232 MEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGLTAADE 291
ED T+G I +P M+E QA A+ E+ +I + DGQ GLT ADE
Sbjct: 64 PEDAPSVDTVGGFEI-----------LPGMVESQAALAVNEAAALIMVCDGQKGLTNADE 112
Query: 292 EIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGTGTGELLDL 350
EI W+RK + K ++LAVNKCES KG QV +FWSLG +PL +SAISGTGTGELLD
Sbjct: 113 EIYGWIRKYHSKKPLLLAVNKCESTTKGEEQVLDFWSLGGPTPLAVSAISGTGTGELLDG 172
Query: 351 VCSEL 355
+ + L
Sbjct: 173 LVAAL 177
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 67/135 (49%), Gaps = 30/135 (22%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGV-- 221
+VAI+GRPNVGKS+L N+L G R+IV D G TRD + + ++ L+DT G+
Sbjct: 199 KVAIIGRPNVGKSSLLNQLAGDARSIVSDYSGTTRDTIDSDVIGADGKKYTLIDTAGIRR 258
Query: 222 ---LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARM-------PS-----MIERQA 266
+ SK P E LA+ + A R A V + PS + ER
Sbjct: 259 RTSVAASKDAP---ESLAVGRAL------QAMRRADVVVLVIDAEEGPSQQDFVLSER-- 307
Query: 267 TAAIEESCVIIFLVD 281
AA++E C ++ V+
Sbjct: 308 -AAVQEGCALVLCVN 321
>gi|282895428|ref|ZP_06303565.1| GTP-binding protein engA [Raphidiopsis brookii D9]
gi|281199461|gb|EFA74324.1| GTP-binding protein engA [Raphidiopsis brookii D9]
Length = 453
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 100/198 (50%), Positives = 122/198 (61%), Gaps = 32/198 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS NRL G AIV DEPGVTRDR Y +FW EF++VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTFVNRLAGDQTAIVHDEPGVTRDRTYRPAFWQNREFLVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ D E +PL I +QA A+ E+C IF+VDG
Sbjct: 62 --------VFND-------NTEFLPL-------------IRQQAITALSEACAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
QAGLT ADEEIA+WLR+ + +LAVNKCESP +G++Q SEFW LG P PISAI G
Sbjct: 94 QAGLTPADEEIAEWLRQQTVP--TLLAVNKCESPDQGVIQASEFWELGLGEPYPISAIHG 151
Query: 342 TGTGELLDLVCSELKKVE 359
+GTG+LLD + +VE
Sbjct: 152 SGTGDLLDELIKYTPQVE 169
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 87/196 (44%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VAIVGRPNVGKS+L N VG RAIV G TRD + + L+DT G+
Sbjct: 178 KVAIVGRPNVGKSSLLNAFVGEERAIVSPISGTTRDTIDTLIEREGQAYRLIDTAGIRK- 236
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + T ++ R A AI + V++ ++D
Sbjct: 237 ------------------KKHVEYGTEFFSINR--------AFKAIRRADVVLLVLDALD 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----LGFSPLP---- 335
G+T D+++A + ++ + I+ VNK ++ K + + L F+
Sbjct: 271 GVTEQDQKLAGRIIED--GRACIIVVNKWDAVEKDSYTIYDHEKSLEARLHFTEWADTIF 328
Query: 336 ISAISGTGTGELLDLV 351
+SA++G ++LDLV
Sbjct: 329 VSAVTGQRVEKILDLV 344
>gi|186682120|ref|YP_001865316.1| GTP-binding protein EngA [Nostoc punctiforme PCC 73102]
gi|238691263|sp|B2J1L2.1|DER_NOSP7 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|186464572|gb|ACC80373.1| small GTP-binding protein [Nostoc punctiforme PCC 73102]
Length = 456
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 98/198 (49%), Positives = 124/198 (62%), Gaps = 32/198 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL G AIV DEPGVTRDR Y +FW EF++VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAGEQTAIVHDEPGVTRDRTYMPAFWNGREFLVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ D E +PL I +QA A+ E+C IF+VDG
Sbjct: 62 --------VFND-------DTEFLPL-------------IRQQAMTALAEACAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G T+AD+EIA+W+R+ + ++LAVNKCESP +G+MQ +EFW LG P PISAI G
Sbjct: 94 QTGPTSADQEIAEWMRQQRVP--VLLAVNKCESPDQGLMQAAEFWELGLGEPYPISAIHG 151
Query: 342 TGTGELLDLVCSELKKVE 359
+GTGELLD + + + VE
Sbjct: 152 SGTGELLDELVNHIPAVE 169
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 91/206 (44%), Gaps = 38/206 (18%)
Query: 155 IGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFM 214
+ ++PE +VAIVGRPNVGKS+L N VG RAIV G TRD + +
Sbjct: 168 VEDIPETNEIKVAIVGRPNVGKSSLLNAFVGEERAIVSPISGTTRDAIDTVIERDGQTYR 227
Query: 215 LVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESC 274
L+DT G+ + I T ++ R A AI +
Sbjct: 228 LIDTAGIRK-------------------KKHIEYGTEFFSINR--------AFKAIRRAD 260
Query: 275 VIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----L 329
V++ ++D G+T D+++A R + I+ VNK ++ K + ++ L
Sbjct: 261 VVLLVLDAVDGVTEQDQKLAG--RIIEEGRACIIVVNKWDAVEKDSYTIYDYEKTLQSRL 318
Query: 330 GFSPLP----ISAISGTGTGELLDLV 351
F+ +SA+SG ++L+LV
Sbjct: 319 HFTEWAETIFVSALSGQRVEKILELV 344
>gi|434403314|ref|YP_007146199.1| ribosome-associated GTPase EngA [Cylindrospermum stagnale PCC 7417]
gi|428257569|gb|AFZ23519.1| ribosome-associated GTPase EngA [Cylindrospermum stagnale PCC 7417]
Length = 454
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 101/198 (51%), Positives = 121/198 (61%), Gaps = 32/198 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL G AIV DEPGVTRDR Y SFW + EFM+VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAGEQTAIVHDEPGVTRDRTYMPSFWNDREFMVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ D E +PL I +QA A+ E+C IF+VDG
Sbjct: 62 --------VFND-------DTEFLPL-------------IRQQALIALAEACAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G T ADEEIA WLR+ + ++LAVNKCESP +G MQ ++FW LG P PISAI G
Sbjct: 94 QTGPTPADEEIAGWLRQQSVP--VLLAVNKCESPDQGAMQAADFWGLGLGEPFPISAIHG 151
Query: 342 TGTGELLDLVCSELKKVE 359
+GTGELLD + + VE
Sbjct: 152 SGTGELLDELVQHIPAVE 169
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 38/202 (18%)
Query: 159 PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDT 218
PE + +VAI+GRPNVGKS+L N VG RAIV G TRD + + L+DT
Sbjct: 172 PETNVIKVAIIGRPNVGKSSLLNVFVGEERAIVSPISGTTRDAIDTVVERNGQTYRLIDT 231
Query: 219 GGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIF 278
G+ + I T ++ R A AI + V++
Sbjct: 232 AGIRK-------------------KKHIEYGTEFFSINR--------AFKAIRRADVVLL 264
Query: 279 LVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----LGFSP 333
++D Q G T D+++A + + + I+ VNK ++ K + ++ L F+
Sbjct: 265 VLDAQDGATEQDQKLAGRILEE--GRACIIVVNKWDTVEKDSYTIYDYEKALQERLHFTE 322
Query: 334 LP----ISAISGTGTGELLDLV 351
+SA++G ++L+LV
Sbjct: 323 WADTIFVSALTGQRVEKVLELV 344
>gi|282900427|ref|ZP_06308377.1| Small GTP-binding protein domain protein [Cylindrospermopsis
raciborskii CS-505]
gi|281194740|gb|EFA69687.1| Small GTP-binding protein domain protein [Cylindrospermopsis
raciborskii CS-505]
Length = 453
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 100/198 (50%), Positives = 122/198 (61%), Gaps = 32/198 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS NRL G AIV DEPGVTRDR Y +FW EF++VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTFVNRLAGDQTAIVHDEPGVTRDRTYRPAFWQNREFLVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ D E +PL I +QA A+ E+C IF+VDG
Sbjct: 62 --------VFND-------DTEFLPL-------------IRQQAITALSEACAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q GLT ADEEIA+WLR+ + +LAVNKCESP +GI+Q SEFW LG P PISAI G
Sbjct: 94 QTGLTPADEEIAEWLRQQPVPT--LLAVNKCESPDQGIIQASEFWELGLGEPYPISAIHG 151
Query: 342 TGTGELLDLVCSELKKVE 359
+GTG+LLD + + +VE
Sbjct: 152 SGTGDLLDDLIQYIPQVE 169
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 86/196 (43%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VAIVGRPNVGKS+L N VG RAIV G TRD + + L+DT G+
Sbjct: 178 KVAIVGRPNVGKSSLLNAFVGEERAIVSPISGTTRDTIDTLIEREGQAYRLIDTAGIRK- 236
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + T ++ R A AI + V++ ++D
Sbjct: 237 ------------------KKHVEYGTEFFSINR--------AFKAIRRADVVLLVLDALD 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----LGFSPLP---- 335
G+T D+++A + ++ + I+ VNK + K + + L F+
Sbjct: 271 GVTEQDQKLAGRIVED--GRACIIVVNKWDVVEKDSYTIYDHEKSLEARLHFTEWADTIF 328
Query: 336 ISAISGTGTGELLDLV 351
+SAI+G ++LDLV
Sbjct: 329 VSAITGQRVEKILDLV 344
>gi|414075715|ref|YP_006995033.1| small GTP-binding protein [Anabaena sp. 90]
gi|413969131|gb|AFW93220.1| small GTP-binding protein [Anabaena sp. 90]
Length = 454
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 95/194 (48%), Positives = 122/194 (62%), Gaps = 32/194 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS NRL G AIV DEPGVTRDR Y +FW + EF++VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTFVNRLAGDQTAIVHDEPGVTRDRTYRPAFWNDREFVVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ D E +P MI +QA A+ E+C IF+VDG
Sbjct: 62 --------VFND-------DTEFLP-------------MIRQQALTALSEACAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
QAGL ADEEI++WLR+ + ++LAVNKCESP +G++Q +EFW LG P PISAI G
Sbjct: 94 QAGLMPADEEISEWLRQQPVP--VLLAVNKCESPDQGVIQAAEFWELGLGEPFPISAIHG 151
Query: 342 TGTGELLDLVCSEL 355
+GTGE+LD + + +
Sbjct: 152 SGTGEILDELMNHI 165
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 89/198 (44%), Gaps = 38/198 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VAI+GRPNVGKS+L N VG RAIV G TRD + G+ + L+DT G+
Sbjct: 178 KVAIIGRPNVGKSSLLNAFVGEYRAIVSPISGTTRDTIDTVVERGDQTYRLIDTAGIRK- 236
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ I T ++ R A AI S V++ ++D
Sbjct: 237 ------------------KKHIEYGTEFFSINR--------AFKAIRRSDVVLLVIDAVD 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----LGFS----PLP 335
G+T D+++A R + ++ VNK ++ K + + L F+ +
Sbjct: 271 GVTEQDQKLAG--RVLEEGRACVIVVNKWDAVEKDSYTIYDHAKELESRLHFTEWADTIY 328
Query: 336 ISAISGTGTGELLDLVCS 353
+SA++G ++L+LV +
Sbjct: 329 VSAVTGQRVEKILELVNT 346
>gi|427707500|ref|YP_007049877.1| GTP-binding protein engA [Nostoc sp. PCC 7107]
gi|427360005|gb|AFY42727.1| GTP-binding protein engA [Nostoc sp. PCC 7107]
Length = 453
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 95/197 (48%), Positives = 123/197 (62%), Gaps = 32/197 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL G AIV DEPGVTRDR Y ++W + E+++VDTGG++
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAGEQTAIVHDEPGVTRDRTYMPAYWNDREYLVVDTGGLV 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
++ E +PL I +QA AA+ E+C IF+V+G
Sbjct: 63 FNDET----------------EFLPL-------------IRQQALAALREACAAIFVVNG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G + ADEEIA+WLR+ + ++LAVNKCESP +GI+Q +EFW LG P PISAI G
Sbjct: 94 QTGPSPADEEIAEWLRQQPVP--VLLAVNKCESPEQGIIQAAEFWELGLGEPYPISAIHG 151
Query: 342 TGTGELLDLVCSELKKV 358
GTGELLD + + V
Sbjct: 152 NGTGELLDELIKHIPSV 168
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 44/210 (20%)
Query: 154 TIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEF 213
++ +PE +VAI+GRPNVGKS+L N VG RAIV G TRD + ++
Sbjct: 167 SVTEIPETNEIKVAIIGRPNVGKSSLLNAFVGEERAIVSPISGTTRDAIDTFIERDGQQY 226
Query: 214 MLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEES 273
L+DT G+ + I T ++ R A AI +
Sbjct: 227 RLIDTAGIRK-------------------KKSIDYGTEFFSINR--------AFKAIRRA 259
Query: 274 CVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF------- 326
V++ ++D G+T D+++A R + I+ VNK ++ K + ++
Sbjct: 260 DVVLLVLDALDGVTEQDQKLAG--RIIEEGRACIVVVNKWDAIEKDSHTIYDYEKSMQER 317
Query: 327 -----WSLGFSPLPISAISGTGTGELLDLV 351
W+ S + +SA++G ++L+LV
Sbjct: 318 LHFTDWA---STIFVSALTGQRVEKILELV 344
>gi|220906981|ref|YP_002482292.1| GTP-binding protein EngA [Cyanothece sp. PCC 7425]
gi|254783149|sp|B8HQE1.1|DER_CYAP4 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|219863592|gb|ACL43931.1| small GTP-binding protein [Cyanothece sp. PCC 7425]
Length = 453
Score = 174 bits (440), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 97/194 (50%), Positives = 120/194 (61%), Gaps = 32/194 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS L NRL G AIV D+PGVTRDR Y SFW + +F++VDTGG++
Sbjct: 3 LPVVAIVGRPNVGKSTLVNRLTGERVAIVHDQPGVTRDRTYRPSFWQDRDFLVVDTGGLV 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ E +PL I +Q A+ E+ V I +VDG
Sbjct: 63 FADDT----------------EFLPL-------------IRQQVVTALSEARVAILVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G+TAADEEIA WLR+ + +++AVNKCESP++G+ Q +EFW LG P PISAI G
Sbjct: 94 QQGITAADEEIAQWLRQQSLP--VLVAVNKCESPQQGLAQGAEFWELGLGEPFPISAIHG 151
Query: 342 TGTGELLDLVCSEL 355
GTGELLD V S L
Sbjct: 152 NGTGELLDQVVSYL 165
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 61/129 (47%), Gaps = 27/129 (20%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS+L N +VG RAIV G TRD + + L+DT G+
Sbjct: 180 VAIVGRPNVGKSSLLNAVVGEQRAIVSPISGTTRDAIDTLVERDGQRYRLIDTAGI---- 235
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+ Q N+ G E + +A AI+ + V++ ++D G
Sbjct: 236 RKQKNV--------DYGPEFFGI---------------NRAFKAIQRAEVVLLVLDALDG 272
Query: 286 LTAADEEIA 294
+T D+++A
Sbjct: 273 VTEQDQKLA 281
>gi|427730612|ref|YP_007076849.1| ribosome-associated GTPase EngA [Nostoc sp. PCC 7524]
gi|427366531|gb|AFY49252.1| ribosome-associated GTPase EngA [Nostoc sp. PCC 7524]
Length = 453
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/197 (48%), Positives = 123/197 (62%), Gaps = 32/197 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL G AIV DEPGVTRDR Y ++WG+ EF++VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAGEQTAIVHDEPGVTRDRTYMPAYWGDREFLVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ D E +PL I +QA AA+ E+ IF+V+G
Sbjct: 62 --------VFND-------DTEFLPL-------------IRQQALAALTEASAAIFVVNG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G +ADEEIA+WLR+ + ++LAVNKCESP +G++Q +EFW LG P PISAI G
Sbjct: 94 QTGPNSADEEIAEWLRQQPVP--VLLAVNKCESPEQGLIQAAEFWELGLGEPYPISAIHG 151
Query: 342 TGTGELLDLVCSELKKV 358
GTGELLD + + + V
Sbjct: 152 NGTGELLDELITHIPAV 168
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 91/206 (44%), Gaps = 38/206 (18%)
Query: 155 IGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFM 214
+ VPE ++AIVGRPNVGKS+L N VG R IV G TRD + +
Sbjct: 168 VTEVPESNEIKIAIVGRPNVGKSSLLNAFVGEERVIVSPISGTTRDAIDTFLERDGQAYR 227
Query: 215 LVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESC 274
L+DT G+ + + N+ G E + +A AI +
Sbjct: 228 LIDTAGI----RKKKNV--------EYGPEFFSI---------------NRAFKAIRRAD 260
Query: 275 VIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----L 329
V++ ++D G+T D+++A R + I+ VNK ++ K + ++ L
Sbjct: 261 VVLLVLDALDGVTEQDQKLAG--RIIEEGRACIIVVNKWDAVEKDSYTIYDYEKNLEARL 318
Query: 330 GFSPLP----ISAISGTGTGELLDLV 351
F+ +SA++G ++L+LV
Sbjct: 319 HFTEWADTIFVSALTGQRVEKILELV 344
>gi|428221421|ref|YP_007105591.1| ribosome-associated GTPase EngA [Synechococcus sp. PCC 7502]
gi|427994761|gb|AFY73456.1| ribosome-associated GTPase EngA [Synechococcus sp. PCC 7502]
Length = 460
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 119/194 (61%), Gaps = 32/194 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA+VGRPNVGKSAL NRL G N AIV D+PG+TRDR Y +FW H+F +VDTGG++
Sbjct: 3 LPIVAVVGRPNVGKSALVNRLTGENYAIVYDQPGITRDRTYRPAFWNGHDFTIVDTGGLV 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ E +P MI +QA AIE+SC +IF+VDG
Sbjct: 63 FADDT----------------EFLP-------------MIRQQAFVAIEQSCAVIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
G+TAAD +IA WLR+ + ++LAVNKCES G+ Q +EFW LG P+ +S++ G
Sbjct: 94 MTGITAADWQIAQWLREQSVP--VVLAVNKCESMNLGMAQAAEFWQLGLGEPIALSSLHG 151
Query: 342 TGTGELLDLVCSEL 355
GTGELLD + L
Sbjct: 152 NGTGELLDALVQHL 165
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 91/206 (44%), Gaps = 42/206 (20%)
Query: 159 PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTR---DRMYGRSFWG-EHEFM 214
PE +VAI+GRPNVGKS+L N G R IV G TR D + R+ G E +
Sbjct: 173 PESDEIKVAIIGRPNVGKSSLLNAFTGEERCIVSPIAGTTRDAIDMIVSRTVNGEERNYR 232
Query: 215 LVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESC 274
L+DT G+ G+ ++ R A AI S
Sbjct: 233 LIDTAGIRR-------------------KRGVEYGAEFFSINR--------AFKAISRSD 265
Query: 275 VIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS------ 328
V++ ++D G+T D+++A R N K +L +NK ++ K + ++
Sbjct: 266 VVLLVIDAIDGVTDQDQKLAG--RINDEGKACVLVINKWDAVEKDSYTIYDYTEQVQSRM 323
Query: 329 --LGFSP-LPISAISGTGTGELLDLV 351
+ ++P + +SA++G ++LD V
Sbjct: 324 MFVDYAPVIFVSALTGQRVPKILDQV 349
>gi|427720843|ref|YP_007068837.1| GTP-binding protein engA [Calothrix sp. PCC 7507]
gi|427353279|gb|AFY36003.1| GTP-binding protein engA [Calothrix sp. PCC 7507]
Length = 454
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/197 (48%), Positives = 121/197 (61%), Gaps = 32/197 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL G AIV DEPGVTRDR Y ++W + E+++VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAGEQTAIVHDEPGVTRDRTYKPAYWSDREYLVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ D E +PL I +QA A+ E+ IFLVDG
Sbjct: 62 --------VFND-------DTEFLPL-------------IRQQAMTALAEASAAIFLVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G T ADEEIA+WLR+ + ++LAVNKCESP +G+MQ +EFW LG P PISAI G
Sbjct: 94 QTGPTPADEEIAEWLRQQPVP--VLLAVNKCESPEQGLMQAAEFWELGLGEPFPISAIHG 151
Query: 342 TGTGELLDLVCSELKKV 358
+GTG++LD + + V
Sbjct: 152 SGTGDILDELIKHIPAV 168
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 38/208 (18%)
Query: 155 IGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFM 214
+ VPE +VAI+GRPNVGKS+L N VG RAIV G TRD + E +
Sbjct: 168 VTEVPETNEIKVAIIGRPNVGKSSLLNAFVGEERAIVSPISGTTRDAIDTVVERNEQTYR 227
Query: 215 LVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESC 274
L+DT G+ + I T ++ R A AI +
Sbjct: 228 LIDTAGIRK-------------------KKSIEYGTEFFSINR--------AFKAIRRAD 260
Query: 275 VIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF-----WSL 329
V++ ++D G+T D+++A + + + I+ VNK ++ K + ++ L
Sbjct: 261 VVLLVLDALDGVTEQDQKLAGRILEE--GRACIIVVNKWDAVEKDSYTIYDYEKDLEGRL 318
Query: 330 GFS----PLPISAISGTGTGELLDLVCS 353
F+ + +SA++G ++L+LV +
Sbjct: 319 HFTEWADTIYVSAVTGQRVEKILELVNT 346
>gi|428313357|ref|YP_007124334.1| ribosome-associated GTPase EngA [Microcoleus sp. PCC 7113]
gi|428254969|gb|AFZ20928.1| ribosome-associated GTPase EngA [Microcoleus sp. PCC 7113]
Length = 464
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/199 (49%), Positives = 121/199 (60%), Gaps = 32/199 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA++GRPNVGKS L NRL G AIV DEPGVTRDR Y FW + EF++VDTGG+
Sbjct: 3 LPIVAVIGRPNVGKSTLVNRLAGVTDAIVHDEPGVTRDRTYRPGFWQDREFLVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I QA AA+ ES IF+VDG
Sbjct: 62 --------VFDD-------DTEFLPL-------------IREQAMAALAESSAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G T ADE IA+WLR+ + F LAVNKCESP++GI+Q S+FW LG P P+S I G
Sbjct: 94 QEGPTPADETIAEWLRQQSVPFF--LAVNKCESPQQGIIQSSQFWELGLGEPFPVSGIHG 151
Query: 342 TGTGELLDLVCSELKKVEV 360
G GELLD + + L+ VE+
Sbjct: 152 NGLGELLDELITHLEPVEI 170
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 88/204 (43%), Gaps = 46/204 (22%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRM---YGRSFWGEHE-----FMLV 216
+VAIVGRPNVGKS+L N G NRAIV G TRD + R E E + L+
Sbjct: 178 KVAIVGRPNVGKSSLLNAFTGENRAIVSPISGTTRDAIDMVVERPGKAEKEGESKTYRLI 237
Query: 217 DTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVI 276
DT G+ + + N+ G E + +A AI S V+
Sbjct: 238 DTAGI----RKKKNV--------DYGPEFFGI---------------NRAFKAIRRSDVV 270
Query: 277 IFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLP- 335
+ ++D G+T D+++A R + ++ VNK ++ K + E L L
Sbjct: 271 LMVIDALDGVTEQDQKLAG--RIAEEGRAAVIVVNKWDAVEKDSHTIYEQEKLVKDRLSF 328
Query: 336 --------ISAISGTGTGELLDLV 351
+SA +G ++LDLV
Sbjct: 329 VDWAEIIFVSAQTGQRVEKILDLV 352
>gi|307103139|gb|EFN51402.1| hypothetical protein CHLNCDRAFT_37436 [Chlorella variabilis]
Length = 540
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 91/199 (45%), Positives = 121/199 (60%), Gaps = 32/199 (16%)
Query: 157 NVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLV 216
VP+ LLP+VAIVGRPNVGKSALFNR+VG AIV D PGVTRDR+Y R+FWG+HEF+LV
Sbjct: 95 QVPDELLPKVAIVGRPNVGKSALFNRIVGRQVAIVYDYPGVTRDRLYTRAFWGDHEFLLV 154
Query: 217 DTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVI 276
DTGG+++ ++ P E+QA + +
Sbjct: 155 DTGGLMSDAEKLPK--------------------------------EQQARPFLPAANPA 182
Query: 277 IFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLPI 336
Q G T+ADEEI WLR+ + +K +ILAVNKCE+ K +Q +EFW G P+ +
Sbjct: 183 CRAFLPQTGGTSADEEIQAWLRRMHPNKPVILAVNKCENAAKADLQAAEFWGSGLEPIAV 242
Query: 337 SAISGTGTGELLDLVCSEL 355
SAISG+GTGEL++ + + L
Sbjct: 243 SAISGSGTGELMERLAAAL 261
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRM-YGRSFWGEHEFMLVDTGGV 221
VAI+GRPNVGKS+L N LVG R+IV G TRD + +F LVDT GV
Sbjct: 276 VAIIGRPNVGKSSLLNALVGEERSIVSSMAGTTRDAIDTDLVLTDGSKFKLVDTAGV 332
>gi|298492105|ref|YP_003722282.1| ribosome-associated GTPase EngA ['Nostoc azollae' 0708]
gi|298234023|gb|ADI65159.1| ribosome-associated GTPase EngA ['Nostoc azollae' 0708]
Length = 454
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/198 (48%), Positives = 121/198 (61%), Gaps = 32/198 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL G AIV DEPGVTRDR Y +FWG EF++VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAGDQTAIVHDEPGVTRDRTYRPAFWGNREFVVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ D E +PL I +QA A+ E+C IF+VDG
Sbjct: 62 --------VFND-------DTEFLPL-------------IRQQALMALSEACAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G AD+EIADWL + + I+LAVNKCESP +G++Q S FW LG P PISAI G
Sbjct: 94 QRGPMPADQEIADWLHQQPVP--ILLAVNKCESPDQGLIQASGFWELGLGEPYPISAIHG 151
Query: 342 TGTGELLDLVCSELKKVE 359
+GTGE+LD + + + V+
Sbjct: 152 SGTGEILDELITHVPNVK 169
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 89/202 (44%), Gaps = 38/202 (18%)
Query: 159 PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDT 218
PE + +VAI+GRPNVGKS+L N VG RAIV G TRD + + L+DT
Sbjct: 172 PEDNVIKVAIIGRPNVGKSSLLNAFVGEERAIVSPISGTTRDTIDTEIVRNGQTYRLIDT 231
Query: 219 GGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIF 278
G+ + I T ++ R A AI + V++
Sbjct: 232 AGIRK-------------------KKHIEYGTEFFSINR--------AFKAIRRADVVLL 264
Query: 279 LVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----LGFSP 333
++D + G T D+++A R + I+ VNK ++ K + ++ L F+
Sbjct: 265 VLDAEDGATEQDQKLAG--RITEEGRACIIVVNKWDAVEKDSYTIYDYEKGLEARLHFTE 322
Query: 334 LP----ISAISGTGTGELLDLV 351
+SA++G ++L+LV
Sbjct: 323 WADIIFVSAVTGQRVEKILELV 344
>gi|428771278|ref|YP_007163068.1| GTP-binding protein engA [Cyanobacterium aponinum PCC 10605]
gi|428685557|gb|AFZ55024.1| GTP-binding protein engA [Cyanobacterium aponinum PCC 10605]
Length = 453
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 97/192 (50%), Positives = 119/192 (61%), Gaps = 32/192 (16%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAI+GRPNVGKSAL NRL G AIV D+PGVTRDR Y R+FW + EF +VDTGG+
Sbjct: 1 MLPIVAIIGRPNVGKSALVNRLCGEQDAIVFDQPGVTRDRTYRRAFWQDREFQVVDTGGL 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ +D E +PL I QA AA+ ES V IF+VD
Sbjct: 61 ---------VFDDET-------EFLPL-------------IREQAEAALSESVVAIFVVD 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ GLTA DEEIA WLR + ++LAVNKCES +G+ +EFW+LG P PISAI
Sbjct: 92 GKLGLTAGDEEIASWLRSQPVP--VVLAVNKCESETQGLTLAAEFWNLGLGEPFPISAIH 149
Query: 341 GTGTGELLDLVC 352
G GTG+LL+ V
Sbjct: 150 GNGTGDLLEKVT 161
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 87/196 (44%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VAIVGRPNVGKS+L N L G RAIV G TRD + + L+DT G+
Sbjct: 177 KVAIVGRPNVGKSSLLNALTGEKRAIVSPISGTTRDAIDMVVERDGKTYRLIDTAGI--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + N+ G E + +A AI+ + V++F++D
Sbjct: 234 -RRKKNV--------DYGTEFFSI---------------NRAFKAIKRADVVLFVIDVLD 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLPI-------- 336
G+T D ++A R K ++ VNK ++ K + E+ + L
Sbjct: 270 GVTEQDLKLAG--RIIDEGKAAVIVVNKWDAVEKDTHTIYEYQKIIGDRLYFMEWADRVF 327
Query: 337 -SAISGTGTGELLDLV 351
SA++G ++LDL+
Sbjct: 328 TSAMTGKRVDKILDLI 343
>gi|428298257|ref|YP_007136563.1| GTP-binding protein engA [Calothrix sp. PCC 6303]
gi|428234801|gb|AFZ00591.1| GTP-binding protein engA [Calothrix sp. PCC 6303]
Length = 455
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 95/194 (48%), Positives = 121/194 (62%), Gaps = 32/194 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS NRL G AIV DEPG+TRDR Y SFW + EF++VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTFMNRLSGEQTAIVHDEPGITRDRTYMPSFWRDREFLVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ D E +PL I +QA A+ E+ IF+V+G
Sbjct: 62 --------VFND-------DTEFLPL-------------IRQQAMLALAEASAAIFVVNG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q GL AADEEI +WLR+ + ++LAVNKCESP +G++Q +EFWSLG P PISAI G
Sbjct: 94 QTGLCAADEEITEWLRQQPVP--VLLAVNKCESPDQGLIQAAEFWSLGLGEPFPISAIHG 151
Query: 342 TGTGELLDLVCSEL 355
+GTGEL+D + + L
Sbjct: 152 SGTGELMDKLITYL 165
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 88/196 (44%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VAI+GRPNVGKS+L N VG RAIV G TRD + + ++DT G+
Sbjct: 178 KVAIIGRPNVGKSSLLNAFVGEERAIVSPISGTTRDAIDTIVEHDGQTYRIIDTAGI--- 234
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + N+ G E + +A AI S V++ ++D
Sbjct: 235 -RKKKNV--------EYGAEFFSI---------------NRAFKAIRRSDVVLMVIDAID 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----LGFSPLP---- 335
G+T D+++A + ++ + ++ VNK ++ K + + L F+
Sbjct: 271 GVTDQDQKLAGRIIED--GRACVIVVNKWDAVEKDSYTIYDHQKQVEQRLNFTEWADMIF 328
Query: 336 ISAISGTGTGELLDLV 351
+SA SG ++LDLV
Sbjct: 329 VSAQSGQRVDKILDLV 344
>gi|428778097|ref|YP_007169884.1| ribosome-associated GTPase EngA [Halothece sp. PCC 7418]
gi|428692376|gb|AFZ45670.1| ribosome-associated GTPase EngA [Halothece sp. PCC 7418]
Length = 455
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 92/198 (46%), Positives = 118/198 (59%), Gaps = 32/198 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NR G AIV DEPG+TRDR+Y SFW + +F++VDTGG++
Sbjct: 4 LPIVAIIGRPNVGKSTLVNRFTGSRHAIVHDEPGITRDRLYQPSFWRDRDFIVVDTGGIV 63
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
S E +P I +QA A+ E+ IF+VDG
Sbjct: 64 FDDDS----------------EFLP-------------EIRQQAMMALSEAVAAIFVVDG 94
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G T+ DEEIADWLR+ + + LAVNKCE+P +G+MQ ++FW LG P P+S I G
Sbjct: 95 QTGPTSGDEEIADWLRQQSVP--VYLAVNKCEAPEQGLMQAAQFWELGLGEPYPVSGIHG 152
Query: 342 TGTGELLDLVCSELKKVE 359
+GTG+LLD V S E
Sbjct: 153 SGTGDLLDAVISTFPPYE 170
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 97/226 (42%), Gaps = 54/226 (23%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHE---FMLVDTGGVL 222
VAI+GRPNVGKS+L N L G +R+IV G TRD + EH+ + L+DT G+
Sbjct: 181 VAIIGRPNVGKSSLLNALTGASRSIVSPVSGTTRDAI---DLQIEHQGQTYRLIDTAGI- 236
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + NI G E + +A AI S V + ++D
Sbjct: 237 ---RKKKNIR--------YGAEFFSI---------------NRAFKAIRRSDVSLLVIDA 270
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSE------------FWSLG 330
+T D ++A + + K I+ VNK ++ K + + +WS
Sbjct: 271 LDSITDQDMKLAGRIEEE--GKAAIIIVNKWDALEKDSKTIYKYEKMLRDRVYFMYWS-- 326
Query: 331 FSPLPISAISGTGTGELLDLVCSEL----KKVEVCIGFLLICNAIT 372
L +SA++G + D + + + ++V + +I AIT
Sbjct: 327 -EILFVSALTGQRVKSIFDSIQTAVQEHRRRVSTAVINEVIQEAIT 371
>gi|425436820|ref|ZP_18817251.1| GTPase Der [Microcystis aeruginosa PCC 9432]
gi|389678397|emb|CCH92742.1| GTPase Der [Microcystis aeruginosa PCC 9432]
Length = 452
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 95/194 (48%), Positives = 118/194 (60%), Gaps = 32/194 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NR+ G +AIV D+PG+TRDR Y +FW + +F +VDTGG++
Sbjct: 3 LPVVAIIGRPNVGKSTLVNRIAGDQQAIVFDQPGITRDRTYQPAFWCDRDFQIVDTGGLV 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
S E +PL I QA A+ E+ V IF+VDG
Sbjct: 63 FNDDS----------------EFLPL-------------IREQALIALAEASVAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
QAG+TA D EIA WLR+ + I+LAVNKCES +GI+Q +EFW L P PISAI G
Sbjct: 94 QAGITAGDREIAAWLRQQNVP--ILLAVNKCESVEQGILQATEFWELAIGEPFPISAIHG 151
Query: 342 TGTGELLDLVCSEL 355
+GTGELLD V L
Sbjct: 152 SGTGELLDAVIKYL 165
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 93/206 (45%), Gaps = 44/206 (21%)
Query: 158 VPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVD 217
+PE+ +VAI+GRPNVGKS+L N L G RAIV G TRD + + L+D
Sbjct: 171 IPENEEIKVAIIGRPNVGKSSLLNALTGQQRAIVSPISGTTRDSIDTLIEREGQVYRLID 230
Query: 218 TGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVII 277
T G+ + + N+ G E + +A AI S V++
Sbjct: 231 TAGI----RRKKNV--------DYGAEFFSI---------------NRAFKAIRRSDVVL 263
Query: 278 FLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF----------- 326
F++D G+T D ++A R + ++L VNK ++ K ++ +
Sbjct: 264 FVIDVLDGVTEQDLKLAG--RIIEEGRAVVLVVNKWDAVEKDTYTINTYTKMLQDRLYFM 321
Query: 327 -WSLGFSPLPISAISGTGTGELLDLV 351
W+ + +SA++G ++L+LV
Sbjct: 322 DWA---EMIFVSAMTGQRVTKILELV 344
>gi|67922213|ref|ZP_00515727.1| Small GTP-binding protein domain:GTP-binding [Crocosphaera watsonii
WH 8501]
gi|67855916|gb|EAM51161.1| Small GTP-binding protein domain:GTP-binding [Crocosphaera watsonii
WH 8501]
Length = 465
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 94/194 (48%), Positives = 119/194 (61%), Gaps = 32/194 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS NRL +AIV DEPG+TRDR Y +FW + +F +VDTGG+
Sbjct: 16 LPIVAIIGRPNVGKSTFVNRLAKDRQAIVHDEPGITRDRTYRPAFWADRDFQVVDTGGL- 74
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I QA AA+ E+ V IF+VDG
Sbjct: 75 --------VFDD-------ETEFLPL-------------IREQAMAALTEASVAIFVVDG 106
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q GLTA D EIADWLR+ + ++LAVNKCESP +G++Q +EFW LG P P+S I G
Sbjct: 107 QLGLTAGDSEIADWLRQQEVP--VLLAVNKCESPDQGLIQAAEFWELGLGEPYPVSGIHG 164
Query: 342 TGTGELLDLVCSEL 355
GTGELLD + + L
Sbjct: 165 NGTGELLDELITYL 178
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 86/195 (44%), Gaps = 38/195 (19%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
V+I+GRPNVGKS+L N +G RAIV G TRD + GE + L+DT G+
Sbjct: 192 VSIIGRPNVGKSSLLNAFLGKKRAIVSPISGTTRDAIDTVVERGEKTYRLIDTAGI---- 247
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+ + N+ G E + +A AI + V++ ++D G
Sbjct: 248 RRKKNV--------NYGAEFFSI---------------NRAFKAIRRADVVLLVIDAIEG 284
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLP---------I 336
+T D ++AD R + I+ VNK ++ K + E+ S L +
Sbjct: 285 VTDQDIKLAD--RIIDEGRAAIIVVNKWDAIDKDSYTIYEYKKKVMSRLYFMEWADLIFV 342
Query: 337 SAISGTGTGELLDLV 351
SA+SG ++ LV
Sbjct: 343 SAMSGKRVEKIFKLV 357
>gi|416389579|ref|ZP_11685375.1| GTP-binding protein EngA [Crocosphaera watsonii WH 0003]
gi|357264204|gb|EHJ13122.1| GTP-binding protein EngA [Crocosphaera watsonii WH 0003]
Length = 465
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 94/194 (48%), Positives = 119/194 (61%), Gaps = 32/194 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS NRL +AIV DEPG+TRDR Y +FW + +F +VDTGG+
Sbjct: 16 LPIVAIIGRPNVGKSTFVNRLAKDRQAIVHDEPGITRDRTYRPAFWADRDFQVVDTGGL- 74
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I QA AA+ E+ V IF+VDG
Sbjct: 75 --------VFDD-------ETEFLPL-------------IREQAMAALTEASVAIFVVDG 106
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q GLTA D EIADWLR+ + ++LAVNKCESP +G++Q +EFW LG P P+S I G
Sbjct: 107 QLGLTAGDSEIADWLRQQEVP--VLLAVNKCESPDQGLIQAAEFWELGLGEPYPVSGIHG 164
Query: 342 TGTGELLDLVCSEL 355
GTGELLD + + L
Sbjct: 165 NGTGELLDELITYL 178
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 86/195 (44%), Gaps = 38/195 (19%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
V+I+GRPNVGKS+L N +G RAIV G TRD + GE + L+DT G+
Sbjct: 192 VSIIGRPNVGKSSLLNAFLGEKRAIVSPISGTTRDAIDTVVERGEKTYRLIDTAGI---- 247
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+ + N+ G E + +A AI + V++ ++D G
Sbjct: 248 RRKKNV--------NYGAEFFSI---------------NRAFKAIRRADVVLLVIDAIEG 284
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLP---------I 336
+T D ++AD R + I+ VNK ++ K + E+ S L +
Sbjct: 285 VTDQDIKLAD--RIIDEGRAAIIVVNKWDAIDKDSYTIYEYKKKVMSRLYFMEWADLIFV 342
Query: 337 SAISGTGTGELLDLV 351
SA+SG ++ LV
Sbjct: 343 SAMSGKRVEKIFKLV 357
>gi|440684386|ref|YP_007159181.1| GTP-binding protein engA [Anabaena cylindrica PCC 7122]
gi|428681505|gb|AFZ60271.1| GTP-binding protein engA [Anabaena cylindrica PCC 7122]
Length = 454
Score = 171 bits (432), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 97/198 (48%), Positives = 119/198 (60%), Gaps = 32/198 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL G AIV DE GVTRDR Y +FW + EF +VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAGDQAAIVHDEAGVTRDRTYRPAFWSDREFSVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ D E +PL I +QA A+ E+C IF+VDG
Sbjct: 62 --------VFND-------DTEFLPL-------------IRQQALMALSEACAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G AD+EIADWLR+ + I LAVNKCESP +G++Q SEFW LG P PISAI G
Sbjct: 94 QTGPMPADQEIADWLRQQPVP--IFLAVNKCESPDQGLIQASEFWELGLGEPFPISAIHG 151
Query: 342 TGTGELLDLVCSELKKVE 359
+GTGE+LD + + V+
Sbjct: 152 SGTGEILDELIKHVPDVK 169
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 91/206 (44%), Gaps = 38/206 (18%)
Query: 155 IGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFM 214
+ +VPE + +VAI+GRPNVGKS+L N VG RAIV G TRD + +
Sbjct: 168 VKDVPEDNVIKVAIIGRPNVGKSSLLNAFVGEERAIVSPISGTTRDTIDTEIERNGQTYR 227
Query: 215 LVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESC 274
L+DT G+ + I T ++ R A AI +
Sbjct: 228 LIDTAGIRK-------------------KKHIEYGTEFFSINR--------AFKAIRRAD 260
Query: 275 VIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF-----WSL 329
V++ ++D + G T D+++A R + I+ VNK ++ K + ++ L
Sbjct: 261 VVLLVLDAEDGATEQDQKLAG--RIIEEGRACIIVVNKWDAVEKDSYTIYDYEKTLETRL 318
Query: 330 GFSPLP----ISAISGTGTGELLDLV 351
F+ +SA +G ++L+LV
Sbjct: 319 HFTEWADIIFVSATTGQRVEKILELV 344
>gi|440753934|ref|ZP_20933136.1| ribosome-associated GTPase EngA [Microcystis aeruginosa TAIHU98]
gi|440174140|gb|ELP53509.1| ribosome-associated GTPase EngA [Microcystis aeruginosa TAIHU98]
Length = 452
Score = 171 bits (432), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 95/194 (48%), Positives = 118/194 (60%), Gaps = 32/194 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NR+ G +AIV D+PG+TRDR Y +FW + +F +VDTGG++
Sbjct: 3 LPVVAIIGRPNVGKSTLVNRIAGDQQAIVFDQPGITRDRTYQPAFWCDRDFQIVDTGGLV 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
S E +PL I QA A+ E+ V IF+VDG
Sbjct: 63 FNDDS----------------EFLPL-------------IREQALIALAEASVAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
QAG+TA D EIA WLR+ + I+LAVNKCES +GI+Q +EFW L P PISAI G
Sbjct: 94 QAGITAGDREIAAWLRQQNVP--ILLAVNKCESVEQGILQATEFWELAIGEPFPISAIHG 151
Query: 342 TGTGELLDLVCSEL 355
+GTGELLD V L
Sbjct: 152 SGTGELLDAVIKYL 165
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 93/206 (45%), Gaps = 44/206 (21%)
Query: 158 VPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVD 217
+PE+ +VAI+GRPNVGKS+L N L G RAIV G TRD + + L+D
Sbjct: 171 IPENEEIKVAIIGRPNVGKSSLLNALTGQQRAIVSPISGTTRDSIDTLIEREGQVYRLID 230
Query: 218 TGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVII 277
T G+ + + N+ G E + +A AI S V++
Sbjct: 231 TAGI----RRKKNV--------DYGAEFFSI---------------NRAFKAIRRSDVVL 263
Query: 278 FLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF----------- 326
F++D G+T D ++A R + ++L VNK ++ K ++ +
Sbjct: 264 FVIDVLDGVTEQDLKLAG--RIIEEGRAVVLVVNKWDAVEKDTYTINTYTKMLQDRLYFM 321
Query: 327 -WSLGFSPLPISAISGTGTGELLDLV 351
W+ + +SA++G ++L+LV
Sbjct: 322 DWA---EMIFVSAMTGQRVTKILELV 344
>gi|443328905|ref|ZP_21057497.1| ribosome-associated GTPase EngA [Xenococcus sp. PCC 7305]
gi|442791450|gb|ELS00945.1| ribosome-associated GTPase EngA [Xenococcus sp. PCC 7305]
Length = 453
Score = 171 bits (432), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 95/198 (47%), Positives = 119/198 (60%), Gaps = 32/198 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS NRL G +AIV D+PG+TRDR Y SFW + EF +VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTFVNRLAGDQQAIVYDKPGITRDRTYRPSFWQDREFQVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I +QA AA+ E+ IF+VDG
Sbjct: 62 --------VFDD-------DTEFLPL-------------IRQQAMAALTEASAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q GLTA D EIADWLR + ++LAVNKCES +G +Q +EFW LG P P+S I G
Sbjct: 94 QMGLTAGDREIADWLRAQSVP--VLLAVNKCESIEQGAIQAAEFWQLGLGEPYPVSGIHG 151
Query: 342 TGTGELLDLVCSELKKVE 359
GTGELLD + + L V+
Sbjct: 152 NGTGELLDELITHLPPVD 169
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 90/206 (43%), Gaps = 38/206 (18%)
Query: 155 IGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFM 214
+ +PE +VAI+GRPNVGKS+L N L G RAIV G TRD + +
Sbjct: 168 VDELPEIEEIKVAIIGRPNVGKSSLLNALTGEKRAIVSSVSGTTRDAIDTVVERNGTTYR 227
Query: 215 LVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESC 274
L+DT G+ + + N+ G E + +A AI +
Sbjct: 228 LIDTAGI----RRKKNV--------EYGAEFFSI---------------NRAFKAIRRAD 260
Query: 275 VIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL 334
V++F++D G+T D ++A R K I+ +NK ++ K + E+ S L
Sbjct: 261 VVLFVLDVLDGVTEQDLKLAG--RIIEEGKATIIILNKWDAVEKDSHTIYEYKQKVMSRL 318
Query: 335 PI---------SAISGTGTGELLDLV 351
SA++G ++LDLV
Sbjct: 319 YFMEWAELLFTSALTGKRVDKILDLV 344
>gi|428779671|ref|YP_007171457.1| ribosome-associated GTPase EngA [Dactylococcopsis salina PCC 8305]
gi|428693950|gb|AFZ50100.1| ribosome-associated GTPase EngA [Dactylococcopsis salina PCC 8305]
Length = 456
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 92/192 (47%), Positives = 118/192 (61%), Gaps = 32/192 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NR G AIV DEPG+TRDR+Y SFW + +F++VDTGG++
Sbjct: 4 LPIVAIIGRPNVGKSTLVNRFTGSRTAIVHDEPGITRDRLYQPSFWRDRDFLVVDTGGIV 63
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
S E +P I +QA A+ E+ IF+VDG
Sbjct: 64 FDDDS----------------EFLP-------------EIRQQAMMALAEAVAAIFVVDG 94
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G+TAADEEI +WLR+ + F LAVNKCES +G++Q ++FW LG PLP+S I G
Sbjct: 95 QEGITAADEEIGNWLRQQNVPYF--LAVNKCESSEQGLIQAAQFWELGLGEPLPVSGIHG 152
Query: 342 TGTGELLDLVCS 353
+GTG+LLD V S
Sbjct: 153 SGTGDLLDAVLS 164
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 37/59 (62%), Gaps = 6/59 (10%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHE---FMLVDTGGV 221
VAI+GRPNVGKS+L N L G +R+IV G TRD + EH+ + L+DT G+
Sbjct: 182 VAIIGRPNVGKSSLLNALTGVSRSIVSPISGTTRDAI---DLQIEHQGQSYRLIDTAGI 237
>gi|428214882|ref|YP_007088026.1| ribosome-associated GTPase EngA [Oscillatoria acuminata PCC 6304]
gi|428003263|gb|AFY84106.1| ribosome-associated GTPase EngA [Oscillatoria acuminata PCC 6304]
Length = 454
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 94/194 (48%), Positives = 119/194 (61%), Gaps = 32/194 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NR+ GG +AIV DEPGVTRDR Y +FW + +F +VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRIAGGKQAIVHDEPGVTRDRTYRDAFWQDRDFQIVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I Q A+ ES V +F+VDG
Sbjct: 62 --------VFDD-------ETEFLPL-------------IREQVLTALSESSVALFIVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G+T AD EIA+WLR + ++LAVNKCES +G+ Q +EFW LG P PISAI G
Sbjct: 94 QQGVTEADREIANWLRHQKVP--VVLAVNKCESLMEGLTQAAEFWELGMGEPYPISAIHG 151
Query: 342 TGTGELLDLVCSEL 355
+GTG+LLD+V L
Sbjct: 152 SGTGDLLDVVIPHL 165
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 88/199 (44%), Gaps = 44/199 (22%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VAIVGRPNVGKS+L N VG RAIV G TRD + + ++DT G+
Sbjct: 178 KVAIVGRPNVGKSSLLNAFVGEKRAIVSPISGTTRDSIDTFVERNGTNYRIIDTAGI--- 234
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + N+ G E + +A AI + V++ ++D
Sbjct: 235 -RKKKNV--------EYGPEFFGI---------------NRAFKAIRRADVVLLVIDAID 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF------------WSLGFS 332
G+T D+++A + ++ + ++ +NK ++ K + ++ W+
Sbjct: 271 GVTEQDQKLAGRIEED--GRACVIVINKWDAIEKDSYTIYDYERDIKSRLYFLEWA---E 325
Query: 333 PLPISAISGTGTGELLDLV 351
+ +SA +G +LDLV
Sbjct: 326 AIFVSAATGKRVENILDLV 344
>gi|307152641|ref|YP_003888025.1| ribosome-associated GTPase EngA [Cyanothece sp. PCC 7822]
gi|306982869|gb|ADN14750.1| ribosome-associated GTPase EngA [Cyanothece sp. PCC 7822]
Length = 452
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 95/194 (48%), Positives = 120/194 (61%), Gaps = 32/194 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL G +AIV DEPG+TRDR Y +FW + +F +VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAGDQQAIVHDEPGITRDRTYRPAFWQDRDFQVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I QA AA+ E+ IF+VDG
Sbjct: 62 --------VFDD-------DTEFLPL-------------IREQAMAALTEANAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q+G TA D+EIADWLR + ++LAVNKCES +GI+Q S+FW LG P PISAI G
Sbjct: 94 QSGPTAGDQEIADWLRSQSVP--VLLAVNKCESVEQGIIQASQFWELGLGEPYPISAIHG 151
Query: 342 TGTGELLDLVCSEL 355
GTG+LLD + + L
Sbjct: 152 NGTGDLLDQLITYL 165
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 97/208 (46%), Gaps = 44/208 (21%)
Query: 156 GNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTR---DRMYGRSFWGEHE 212
G VPE+ +VAIVGRPNVGKS+L N G RAIV G TR D + R+ G+H
Sbjct: 169 GEVPENDEIKVAIVGRPNVGKSSLLNAFTGQQRAIVSPISGTTRDTIDTIIERN--GQH- 225
Query: 213 FMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEE 272
+ L+DT G+ + + N+ G E + +A AI
Sbjct: 226 YRLIDTAGI----RRKKNV--------EYGAEFFGI---------------NRAFKAIRR 258
Query: 273 SCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS 332
S V++F+VD G+T D ++A R + IL VNK ++ K + E+ + S
Sbjct: 259 SDVVLFVVDALDGITDQDLKLAG--RIIDEGRATILVVNKWDAVEKDSYTIYEYQKILGS 316
Query: 333 PLP---------ISAISGTGTGELLDLV 351
L +SA++G ++LDLV
Sbjct: 317 RLYFMDWAEMIFVSALTGQRVEKILDLV 344
>gi|443311191|ref|ZP_21040823.1| ribosome-associated GTPase EngA [Synechocystis sp. PCC 7509]
gi|442778721|gb|ELR88982.1| ribosome-associated GTPase EngA [Synechocystis sp. PCC 7509]
Length = 458
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 91/194 (46%), Positives = 118/194 (60%), Gaps = 32/194 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS + NRL G AIV DEPG+TRDR Y ++WG+ +F++VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTIVNRLAGTGAAIVYDEPGITRDRTYVNAYWGDRDFVVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +P I QA A++E+ +F+VDG
Sbjct: 62 --------VFDD-------DTEFLP-------------QIREQAALALKEASAALFIVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
QAG+ AADEEIA WLR+ + ++LAVNKCES G+ Q S+FW LG P P+S I G
Sbjct: 94 QAGICAADEEIAQWLRQQSVP--VVLAVNKCESAELGLSQASQFWELGLGEPFPMSGIHG 151
Query: 342 TGTGELLDLVCSEL 355
GTGELLD V + L
Sbjct: 152 NGTGELLDAVVAHL 165
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 29/154 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVGRPNVGKS+L N VG NRAIV G TRD + + L+DT G+
Sbjct: 178 KIAIVGRPNVGKSSLLNAFVGENRAIVSPISGTTRDAIDTVIERDGKTYRLIDTAGI--- 234
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + N+ G E + +A AI + V++ ++D +
Sbjct: 235 -RRKKNV--------EYGAEFFGI---------------NRAFKAIRRADVVLLVLDAED 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+T D+++ R + ++ +NK ++ K
Sbjct: 271 GVTEQDQKLV--ARIEEEGRSCVVVINKWDAVEK 302
>gi|425444703|ref|ZP_18824749.1| GTPase Der [Microcystis aeruginosa PCC 9443]
gi|425454422|ref|ZP_18834162.1| GTPase Der [Microcystis aeruginosa PCC 9807]
gi|389735514|emb|CCI01008.1| GTPase Der [Microcystis aeruginosa PCC 9443]
gi|389804906|emb|CCI15700.1| GTPase Der [Microcystis aeruginosa PCC 9807]
Length = 452
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/194 (48%), Positives = 118/194 (60%), Gaps = 32/194 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NR+ G +AIV D+PG+TRDR Y +FW + +F +VDTGG++
Sbjct: 3 LPVVAIIGRPNVGKSTLVNRIAGDQQAIVFDQPGITRDRTYQPAFWCDRDFQIVDTGGLV 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
S E +PL I QA A+ E+ V IF+VDG
Sbjct: 63 FNDDS----------------EFLPL-------------IREQALIALAEASVAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
QAG+TA D EIA WLR+ + I+LAVNKCES +GI+Q +EFW L P PISAI G
Sbjct: 94 QAGITAGDREIAAWLRQQNVP--ILLAVNKCESVEQGILQATEFWELAIGEPFPISAIHG 151
Query: 342 TGTGELLDLVCSEL 355
+GTGELLD + L
Sbjct: 152 SGTGELLDALIKYL 165
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 93/206 (45%), Gaps = 44/206 (21%)
Query: 158 VPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVD 217
+PE+ +VAI+GRPNVGKS+L N L G RAIV G TRD + + L+D
Sbjct: 171 IPENEEIKVAIIGRPNVGKSSLLNALTGQQRAIVSPISGTTRDSIDTLIEREGQVYRLID 230
Query: 218 TGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVII 277
T G+ + + N+ G E + +A AI S V++
Sbjct: 231 TAGI----RRKKNV--------DYGAEFFSI---------------NRAFKAIRRSDVVL 263
Query: 278 FLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF----------- 326
F++D G+T D ++A R + ++L VNK ++ K ++ +
Sbjct: 264 FVIDVLDGVTEQDLKLAG--RIIEEGRAVVLVVNKWDAVEKDTYTINTYTKMLQDRLYFM 321
Query: 327 -WSLGFSPLPISAISGTGTGELLDLV 351
W+ + +SA++G ++L+LV
Sbjct: 322 DWA---EMIFVSAMTGQRVTKILELV 344
>gi|422302781|ref|ZP_16390140.1| GTPase Der [Microcystis aeruginosa PCC 9806]
gi|425466062|ref|ZP_18845365.1| GTPase Der [Microcystis aeruginosa PCC 9809]
gi|389787937|emb|CCI16786.1| GTPase Der [Microcystis aeruginosa PCC 9806]
gi|389831589|emb|CCI25539.1| GTPase Der [Microcystis aeruginosa PCC 9809]
Length = 452
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/194 (48%), Positives = 117/194 (60%), Gaps = 32/194 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NR+ G +AIV D+PG+TRDR Y +FW + +F +VDTGG++
Sbjct: 3 LPVVAIIGRPNVGKSTLVNRIAGDQQAIVFDQPGITRDRTYQPAFWCDRDFQIVDTGGLV 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
S E +PL I QA A+ E+ V IF+VDG
Sbjct: 63 FNDDS----------------EFLPL-------------IREQALIALAEASVAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G+TA D EIA WLR+ + I+LAVNKCES +GI+Q +EFW L P PISAI G
Sbjct: 94 QGGITAGDREIAAWLRQQNVP--ILLAVNKCESVEQGILQATEFWELAIGEPFPISAIHG 151
Query: 342 TGTGELLDLVCSEL 355
+GTGELLD V L
Sbjct: 152 SGTGELLDAVIKYL 165
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 93/206 (45%), Gaps = 44/206 (21%)
Query: 158 VPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVD 217
+PE+ +VAI+GRPNVGKS+L N L G RAIV G TRD + + L+D
Sbjct: 171 IPENEEIKVAIIGRPNVGKSSLLNALTGQQRAIVSPISGTTRDSIDTLIEREGQVYRLID 230
Query: 218 TGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVII 277
T G+ + + N+ G E + +A AI S V++
Sbjct: 231 TAGI----RRKKNV--------DYGAEFFSI---------------NRAFKAIRRSDVVL 263
Query: 278 FLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF----------- 326
F++D G+T D ++A R + ++L VNK ++ K ++ +
Sbjct: 264 FVIDVLDGVTEQDLKLAG--RIIEEGRAVVLVVNKWDAVEKDTYTINTYTKMLQDRLYFM 321
Query: 327 -WSLGFSPLPISAISGTGTGELLDLV 351
W+ + +SA++G ++L+LV
Sbjct: 322 DWA---EMIFVSAMTGQRVTKILELV 344
>gi|425449723|ref|ZP_18829559.1| GTPase Der [Microcystis aeruginosa PCC 7941]
gi|389769807|emb|CCI05487.1| GTPase Der [Microcystis aeruginosa PCC 7941]
Length = 452
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/194 (48%), Positives = 118/194 (60%), Gaps = 32/194 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NR+ G +AIV D+PG+TRDR Y +FW + +F +VDTGG++
Sbjct: 3 LPVVAIIGRPNVGKSTLVNRIAGDQQAIVFDQPGITRDRTYQPAFWCDRDFQIVDTGGLV 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
S E +PL I QA A+ E+ V IF+VDG
Sbjct: 63 FNDDS----------------EFLPL-------------IREQALIALAEASVAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
QAG+TA D EIA WLR+ + I+LAVNKCES +GI+Q +EFW L P PISAI G
Sbjct: 94 QAGITAGDREIAAWLRQQNVP--ILLAVNKCESVEQGILQATEFWELAIGEPFPISAIHG 151
Query: 342 TGTGELLDLVCSEL 355
+GTGELLD + L
Sbjct: 152 SGTGELLDALIKYL 165
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 93/206 (45%), Gaps = 44/206 (21%)
Query: 158 VPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVD 217
+PE+ +VAI+GRPNVGKS+L N L G RAIV G TRD + + L+D
Sbjct: 171 IPENEEIKVAIIGRPNVGKSSLLNALTGQQRAIVSPISGTTRDSIDTLIEREGQVYRLID 230
Query: 218 TGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVII 277
T G+ + + N+ G E + +A AI S V++
Sbjct: 231 TAGI----RRKKNV--------DYGAEFFSI---------------NRAFKAIRRSDVVL 263
Query: 278 FLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF----------- 326
F++D G+T D ++A R + ++L VNK ++ K ++ +
Sbjct: 264 FVIDVLDGVTEQDLKLAG--RIIEEGRAVVLVVNKWDAVEKDTYTINTYTKMLQDRLYFM 321
Query: 327 -WSLGFSPLPISAISGTGTGELLDLV 351
W+ + +SA++G ++L+LV
Sbjct: 322 DWA---EMIFVSAMTGQRVTKILELV 344
>gi|425462207|ref|ZP_18841681.1| GTPase Der [Microcystis aeruginosa PCC 9808]
gi|443648023|ref|ZP_21129853.1| ribosome-associated GTPase EngA [Microcystis aeruginosa DIANCHI905]
gi|159028658|emb|CAO88129.1| engA [Microcystis aeruginosa PCC 7806]
gi|389824795|emb|CCI25954.1| GTPase Der [Microcystis aeruginosa PCC 9808]
gi|443335289|gb|ELS49764.1| ribosome-associated GTPase EngA [Microcystis aeruginosa DIANCHI905]
Length = 452
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/194 (48%), Positives = 118/194 (60%), Gaps = 32/194 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NR+ G +AIV D+PG+TRDR Y +FW + +F +VDTGG++
Sbjct: 3 LPVVAIIGRPNVGKSTLVNRIAGDQQAIVFDQPGITRDRTYQPAFWCDRDFQIVDTGGLV 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
S E +PL I QA A+ E+ V IF+VDG
Sbjct: 63 FNDDS----------------EFLPL-------------IREQALIALAEASVAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
QAG+TA D EIA WLR+ + I+LAVNKCES +GI+Q +EFW L P PISAI G
Sbjct: 94 QAGITAGDREIAAWLRQQNVP--ILLAVNKCESVEQGILQATEFWELAIGEPFPISAIHG 151
Query: 342 TGTGELLDLVCSEL 355
+GTGELLD + L
Sbjct: 152 SGTGELLDALIKYL 165
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 93/206 (45%), Gaps = 44/206 (21%)
Query: 158 VPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVD 217
+PE+ +VAI+GRPNVGKS+L N L G RAIV G TRD + + L+D
Sbjct: 171 IPENEEIKVAIIGRPNVGKSSLLNALTGQQRAIVSPISGTTRDSIDTLIEREGQVYRLID 230
Query: 218 TGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVII 277
T G+ + + N+ G E + +A AI S V++
Sbjct: 231 TAGI----RRKKNV--------DYGAEFFSI---------------NRAFKAIRRSDVVL 263
Query: 278 FLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF----------- 326
F++D G+T D ++A R + ++L VNK ++ K ++ +
Sbjct: 264 FVIDVLDGVTEQDLKLAG--RIIEEGRAVVLVVNKWDAVEKDTYTINTYTKMLQDRLYFM 321
Query: 327 -WSLGFSPLPISAISGTGTGELLDLV 351
W+ + +SA++G ++L+LV
Sbjct: 322 DWA---EMIFVSAMTGQRVTKILELV 344
>gi|218437880|ref|YP_002376209.1| GTP-binding protein EngA [Cyanothece sp. PCC 7424]
gi|226741132|sp|B7KHD2.1|DER_CYAP7 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|218170608|gb|ACK69341.1| small GTP-binding protein [Cyanothece sp. PCC 7424]
Length = 452
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/198 (48%), Positives = 119/198 (60%), Gaps = 32/198 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL G +AIV DEPG+TRDR Y +FW + +F +VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAGDQQAIVHDEPGITRDRTYRPAFWQDRDFQVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I QA A+ E+ IF+VDG
Sbjct: 62 --------VFDD-------DTEFLPL-------------IREQAMTALAEAHAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G T ADEEIA+WLR + IILAVNKCES +G++Q SEFW LG P PIS+I G
Sbjct: 94 QTGPTPADEEIANWLRSQSVP--IILAVNKCESVEQGLIQASEFWQLGLGEPYPISSIHG 151
Query: 342 TGTGELLDLVCSELKKVE 359
+GTGELLD + L E
Sbjct: 152 SGTGELLDKLIIYLPTTE 169
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 92/196 (46%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VAIVGRPNVGKS+L N L G NRAIV G TRD + E ++ L+DT G+
Sbjct: 178 KVAIVGRPNVGKSSLLNALTGENRAIVSPISGTTRDAIDMVVQRNEQQYRLIDTAGI--- 234
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + N+ G E + +A AI + V++F++D
Sbjct: 235 -RRKKNV--------EYGAEFFSI---------------NRAFKAIRRADVVLFVIDALD 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLP--------- 335
G+T D ++A R + + +L +NK ++ K + E+ + S L
Sbjct: 271 GITDQDLKLAG--RISDEGRATVLVINKWDAVDKDSYTIYEYQKMLESRLYFMDWAEMIF 328
Query: 336 ISAISGTGTGELLDLV 351
+SA++G ++LDLV
Sbjct: 329 VSALTGKRVEKILDLV 344
>gi|390441692|ref|ZP_10229732.1| GTPase Der [Microcystis sp. T1-4]
gi|389835005|emb|CCI33858.1| GTPase Der [Microcystis sp. T1-4]
Length = 452
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/194 (48%), Positives = 118/194 (60%), Gaps = 32/194 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NR+ G +AIV D+PG+TRDR Y +FW + +F +VDTGG++
Sbjct: 3 LPVVAIIGRPNVGKSTLVNRIAGDQQAIVFDQPGITRDRTYQPAFWCDRDFQIVDTGGLV 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
S E +PL I QA A+ E+ V IF+VDG
Sbjct: 63 FNDDS----------------EFLPL-------------IREQALIALAEASVAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
QAG+TA D EIA WLR+ + I+LAVNKCES +GI+Q +EFW L P PISAI G
Sbjct: 94 QAGITAGDREIAAWLRQQNVP--ILLAVNKCESVEQGILQATEFWELAIGEPFPISAIHG 151
Query: 342 TGTGELLDLVCSEL 355
+GTGELLD + L
Sbjct: 152 SGTGELLDALIKYL 165
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 93/206 (45%), Gaps = 44/206 (21%)
Query: 158 VPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVD 217
+PE+ +VAI+GRPNVGKS+L N L G RAIV G TRD + + L+D
Sbjct: 171 IPENEEIKVAIIGRPNVGKSSLLNALTGQQRAIVSPISGTTRDSIDTLIEREGQVYRLID 230
Query: 218 TGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVII 277
T G+ + + N+ G E + +A AI S V++
Sbjct: 231 TAGI----RRKKNV--------DYGAEFFSI---------------NRAFKAIRRSDVVL 263
Query: 278 FLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF----------- 326
F++D G+T D ++A R + ++L VNK ++ K ++ +
Sbjct: 264 FVIDVLDGVTEQDLKLAG--RIIEEGRAVVLVVNKWDAVEKDTYTINTYTKILQDRLYFM 321
Query: 327 -WSLGFSPLPISAISGTGTGELLDLV 351
W+ + +SA++G ++L+LV
Sbjct: 322 DWA---EMIFVSAMTGQRVTKILELV 344
>gi|75909106|ref|YP_323402.1| GTP-binding protein EngA [Anabaena variabilis ATCC 29413]
gi|123609166|sp|Q3M929.1|DER_ANAVT RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|75702831|gb|ABA22507.1| Small GTP-binding protein domain protein [Anabaena variabilis ATCC
29413]
Length = 453
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/194 (50%), Positives = 117/194 (60%), Gaps = 32/194 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL G AIV DEPGVTRDR Y ++W + EF +VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAGEQTAIVHDEPGVTRDRTYLPAYWSDREFQVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ D E +PL I +QA AA+ E+ IF+V+G
Sbjct: 62 --------VFND-------DTEFLPL-------------IRQQALAALHEASAAIFVVNG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G +ADEEIA+WLR+ + F LAVNKCESP +G +Q SEFW LG P PISAI G
Sbjct: 94 QTGPNSADEEIAEWLRQQPVPVF--LAVNKCESPDQGSIQASEFWELGLGEPYPISAIHG 151
Query: 342 TGTGELLDLVCSEL 355
GTGELLD + L
Sbjct: 152 NGTGELLDELIKHL 165
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 85/197 (43%), Gaps = 38/197 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS+L N G R IV G TRD + + L+DT G+
Sbjct: 178 KIAIIGRPNVGKSSLLNAFAGEERVIVSPISGTTRDAIDTFIERNGQNYRLIDTAGIRK- 236
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ I T ++ R A AI + V++ ++D
Sbjct: 237 ------------------KKSIDYGTEFFSINR--------AFKAIRRADVVLLVIDALD 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----LGFS----PLP 335
G+T D+++A + K ++ VNK ++ K + ++ L F+ +
Sbjct: 271 GVTEQDQKLAGRILDE--GKACVVVVNKWDAVEKDSYTIYDYEKNLEARLHFTEWADTIY 328
Query: 336 ISAISGTGTGELLDLVC 352
+SA++G ++L+LV
Sbjct: 329 VSAVTGQRVEKILELVT 345
>gi|425470890|ref|ZP_18849750.1| GTPase Der [Microcystis aeruginosa PCC 9701]
gi|389883325|emb|CCI36268.1| GTPase Der [Microcystis aeruginosa PCC 9701]
Length = 452
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/194 (48%), Positives = 117/194 (60%), Gaps = 32/194 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NR+ G +AIV D+PG+TRDR Y +FW + +F +VDTGG++
Sbjct: 3 LPVVAIIGRPNVGKSTLVNRIAGDQQAIVFDQPGITRDRTYQPAFWCDRDFQIVDTGGLV 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
S E +PL I QA A+ E+ V IF+VDG
Sbjct: 63 FNDDS----------------EFLPL-------------IREQALIALAEASVAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G+TA D EIA WLR+ + I+LAVNKCES +GI+Q +EFW L P PISAI G
Sbjct: 94 QGGITAGDREIAAWLRQQNVP--ILLAVNKCESVEQGILQATEFWELAIGEPFPISAIHG 151
Query: 342 TGTGELLDLVCSEL 355
+GTGELLD V L
Sbjct: 152 SGTGELLDAVIKYL 165
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 93/206 (45%), Gaps = 44/206 (21%)
Query: 158 VPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVD 217
+PE+ +VAI+GRPNVGKS+L N L G RAIV G TRD + + L+D
Sbjct: 171 IPENEEIKVAIIGRPNVGKSSLLNALTGQQRAIVSPISGTTRDSIDTLIEREGQVYRLID 230
Query: 218 TGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVII 277
T G+ + + N+ G E + +A AI S V++
Sbjct: 231 TAGI----RRKKNV--------DYGAEFFSI---------------NRAFKAIRRSDVVL 263
Query: 278 FLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF----------- 326
F++D G+T D ++A R + ++L VNK ++ K ++ +
Sbjct: 264 FVIDVLDGVTEQDLKLAG--RIIEEGRAVVLVVNKWDAVEKDTYTINTYTKMLQDRLYFM 321
Query: 327 -WSLGFSPLPISAISGTGTGELLDLV 351
W+ + +SA++G ++L+LV
Sbjct: 322 DWA---EMIFVSAMTGQRVTKILELV 344
>gi|166362822|ref|YP_001655095.1| GTP-binding protein EngA [Microcystis aeruginosa NIES-843]
gi|425441648|ref|ZP_18821918.1| GTPase Der [Microcystis aeruginosa PCC 9717]
gi|189037151|sp|B0JFL6.1|DER_MICAN RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|166085195|dbj|BAF99902.1| GTP binding protein [Microcystis aeruginosa NIES-843]
gi|389717577|emb|CCH98352.1| GTPase Der [Microcystis aeruginosa PCC 9717]
Length = 452
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/194 (48%), Positives = 117/194 (60%), Gaps = 32/194 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NR+ G +AIV D+PG+TRDR Y +FW + +F +VDTGG++
Sbjct: 3 LPVVAIIGRPNVGKSTLVNRIAGDQQAIVFDQPGITRDRTYQPAFWCDRDFQIVDTGGLV 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
S E +PL I QA A+ E+ V IF+VDG
Sbjct: 63 FNDDS----------------EFLPL-------------IREQALIALAEASVAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G+TA D EIA WLR+ + I+LAVNKCES +GI+Q +EFW L P PISAI G
Sbjct: 94 QGGITAGDREIAAWLRQQNVP--ILLAVNKCESVEQGILQATEFWELAIGEPFPISAIHG 151
Query: 342 TGTGELLDLVCSEL 355
+GTGELLD V L
Sbjct: 152 SGTGELLDAVIKYL 165
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 93/206 (45%), Gaps = 44/206 (21%)
Query: 158 VPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVD 217
+PE+ +VAI+GRPNVGKS+L N L G RAIV G TRD + + L+D
Sbjct: 171 IPENEEIKVAIIGRPNVGKSSLLNALTGQQRAIVSPISGTTRDSIDTLIEREGQVYRLID 230
Query: 218 TGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVII 277
T G+ + + N+ G E + +A AI S V++
Sbjct: 231 TAGI----RRKKNV--------DYGAEFFSI---------------NRAFKAIRRSDVVL 263
Query: 278 FLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF----------- 326
F++D G+T D ++A R + ++L VNK ++ K ++ +
Sbjct: 264 FVIDVLDGVTEQDLKLAG--RIIEEGRAVVLVVNKWDAVEKDTYTINTYTKMLQDRLYFM 321
Query: 327 -WSLGFSPLPISAISGTGTGELLDLV 351
W+ + +SA++G ++L+LV
Sbjct: 322 DWA---EMIFVSAMTGQRVTKILELV 344
>gi|17227979|ref|NP_484527.1| GTP-binding protein EngA [Nostoc sp. PCC 7120]
gi|26006724|sp|Q8YZH7.1|DER_NOSS1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|17129828|dbj|BAB72441.1| GTP binding protein [Nostoc sp. PCC 7120]
Length = 453
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/197 (49%), Positives = 118/197 (59%), Gaps = 32/197 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL G AIV DEPGVTRDR Y ++W + EF +VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAGEQTAIVHDEPGVTRDRTYLPAYWSDREFQVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ D E +PL I +QA AA+ E+ IF+V+G
Sbjct: 62 --------VFND-------DTEFLPL-------------IRQQALAALHEASAAIFVVNG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G +ADEEIA+WLR+ + F LAVNKCESP +G +Q SEFW LG P PISAI G
Sbjct: 94 QTGPNSADEEIAEWLRQQPVPVF--LAVNKCESPDQGSIQASEFWELGLGEPYPISAIHG 151
Query: 342 TGTGELLDLVCSELKKV 358
GTGELLD + L V
Sbjct: 152 NGTGELLDELIKHLPPV 168
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 85/197 (43%), Gaps = 38/197 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS+L N G R IV G TRD + + L+DT G+
Sbjct: 178 KIAIIGRPNVGKSSLLNAFAGEERVIVSPISGTTRDAIDTFIERDGQNYRLIDTAGIRK- 236
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ I T ++ R A AI + V++ ++D
Sbjct: 237 ------------------KKSIDYGTEFFSINR--------AFKAIRRADVVLLVIDALD 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----LGFS----PLP 335
G+T D+++A + K ++ VNK ++ K + ++ L F+ +
Sbjct: 271 GVTEQDQKLAGRILDE--GKACVVVVNKWDAVEKDSYTIYDYEKNLEARLHFTEWADTIY 328
Query: 336 ISAISGTGTGELLDLVC 352
+SA++G ++L+LV
Sbjct: 329 VSAVTGQRVEKILELVT 345
>gi|126658269|ref|ZP_01729419.1| GTP-binding protein EngA [Cyanothece sp. CCY0110]
gi|126620418|gb|EAZ91137.1| GTP-binding protein EngA [Cyanothece sp. CCY0110]
Length = 452
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 93/194 (47%), Positives = 119/194 (61%), Gaps = 32/194 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL +AIV D+PG+TRDR Y +FW + +F +VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAKDRQAIVHDQPGITRDRTYRPAFWRDRDFQVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I QA AA+ E+ IF+VDG
Sbjct: 62 --------VFDD-------DTEFLPL-------------IREQAMAALTEASAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G TA D EI+DWLR+ + ++LAVNKCESP +G+MQ +EFW LG P PIS I G
Sbjct: 94 QLGPTAGDREISDWLRRQQVP--VLLAVNKCESPEQGLMQAAEFWELGLGEPYPISGIHG 151
Query: 342 TGTGELLDLVCSEL 355
+GTGELLD + + L
Sbjct: 152 SGTGELLDELITYL 165
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 41/204 (20%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
V+I+GRPNVGKS+L N +G RAIV G TRD + GE+ + L+DT G+
Sbjct: 179 VSIIGRPNVGKSSLLNAFLGEQRAIVSPISGTTRDTIDTVVERGENTYRLIDTAGI---- 234
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+ + N+ G E + +A AI + V++ ++D G
Sbjct: 235 RRKKNV--------NYGAEFFSI---------------NRAFKAIRRADVVLLVIDAIDG 271
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLP---------I 336
+T D ++AD R + I+ VNK ++ K + E+ L +
Sbjct: 272 VTDQDIKLAD--RIIDEGRAAIIVVNKWDAVEKDSYTIYEYKQRVMDRLYFMEWADIIFV 329
Query: 337 SAISGT---GTGELLDLVCSELKK 357
SA+SG EL+DL E ++
Sbjct: 330 SAMSGKRVENIFELVDLAVEEHRR 353
>gi|411118714|ref|ZP_11391094.1| ribosome-associated GTPase EngA [Oscillatoriales cyanobacterium
JSC-12]
gi|410710577|gb|EKQ68084.1| ribosome-associated GTPase EngA [Oscillatoriales cyanobacterium
JSC-12]
Length = 452
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 121/194 (62%), Gaps = 32/194 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS + NRL G AIV DEPGVTRDR Y R++W + EF++VDTGG+
Sbjct: 3 LPVVAIIGRPNVGKSTIVNRLAGVQEAIVYDEPGVTRDRTYKRAYWRDREFLVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I QA AA+ E+ V IF+VDG
Sbjct: 62 --------VFDD-------DTEFLPL-------------IREQAMAALAEASVAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
QAG T D EIA+WLR+ + ++LAVNKCES +G++Q ++FW LG P P+S I G
Sbjct: 94 QAGPTGGDHEIAEWLRQQTVP--VLLAVNKCESVDQGVIQAADFWELGLGEPHPVSGIHG 151
Query: 342 TGTGELLDLVCSEL 355
+GTG+LLD + + L
Sbjct: 152 SGTGDLLDELVNYL 165
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 88/199 (44%), Gaps = 44/199 (22%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VAI GRPNVGKS+L N VG NRAIV G TRD + + ++DT G+
Sbjct: 178 KVAIAGRPNVGKSSLLNAFVGENRAIVSPISGTTRDAIDMVVERNGQTYRIIDTAGI--- 234
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + N+ G E + +A AI + V++F++D
Sbjct: 235 -RKKKNV--------EYGPEFFGI---------------NRAFKAIARADVVLFVIDALD 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF------------WSLGFS 332
G+T D+++A R + +L VNK ++ K + ++ W+
Sbjct: 271 GVTEQDQKLAG--RIADEGRACVLVVNKWDAVEKDSHTIYDYEREITSRLHFIEWA---E 325
Query: 333 PLPISAISGTGTGELLDLV 351
+ ISA +G ++LDLV
Sbjct: 326 VIFISAKTGQRVEKILDLV 344
>gi|119513020|ref|ZP_01632078.1| Small GTP-binding protein domain [Nodularia spumigena CCY9414]
gi|119462337|gb|EAW43316.1| Small GTP-binding protein domain [Nodularia spumigena CCY9414]
Length = 454
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 94/194 (48%), Positives = 119/194 (61%), Gaps = 32/194 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL G AIV DEPGVTRDR Y S+W + +F++VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAGEQTAIVHDEPGVTRDRTYMPSYWRDRDFLVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ D E +PL I +QA A+ ++ I +VDG
Sbjct: 62 --------VFND-------DTEFLPL-------------IRQQALTALSQASAAILVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q GLT +D+EIA WLR+ + ++LAVNKCESP +G +Q SEFW LG P PISAI G
Sbjct: 94 QTGLTGSDQEIATWLRQQPVP--VLLAVNKCESPDQGAVQASEFWGLGLGEPYPISAIHG 151
Query: 342 TGTGELLDLVCSEL 355
+GTGELLD + S +
Sbjct: 152 SGTGELLDELISHI 165
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 87/196 (44%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VAI+GRPNVGKS+L N VG R+IV G TRD + + + L+DT G+
Sbjct: 178 KVAIIGRPNVGKSSLLNAFVGEERSIVSPISGTTRDAIDTVISRNDQVYRLIDTAGIRR- 236
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K Q I T ++ R A AI + V++ ++D
Sbjct: 237 -KKQ-----------------IDYGTEFFSINR--------AFKAIRRADVVLMVIDALD 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----LGFSPLP---- 335
G+T D+++A R + I+ VNK ++ K + ++ L F+
Sbjct: 271 GVTDQDQKLAG--RIIDEGRACIIVVNKWDAIEKDSYTIYDYEKTIESRLHFTEWAETIF 328
Query: 336 ISAISGTGTGELLDLV 351
+SA +G ++LDLV
Sbjct: 329 VSASTGQRVDKILDLV 344
>gi|254417083|ref|ZP_05030829.1| GTPase, putative [Coleofasciculus chthonoplastes PCC 7420]
gi|196176061|gb|EDX71079.1| GTPase, putative [Coleofasciculus chthonoplastes PCC 7420]
Length = 461
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 93/198 (46%), Positives = 122/198 (61%), Gaps = 32/198 (16%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VA++GRPNVGKS L NRL G AIV D+PGVTRDR Y +FW + ++ +VDTGG+
Sbjct: 2 VLPVVAVIGRPNVGKSTLVNRLAGVMDAIVHDQPGVTRDRTYRPAFWQDRDYSIVDTGGL 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ +D E +PL I QA AA+ E+ I +VD
Sbjct: 62 ---------VFDD-------DTEFLPL-------------IREQAMAALSEASAAILVVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
GQ G TAAD IADWLR++ + ++LAVNKCESP++G++Q +EFW LG P P+SAI
Sbjct: 93 GQMGPTAADYAIADWLRQHPVP--VVLAVNKCESPQQGLIQAAEFWELGLGEPFPVSAIH 150
Query: 341 GTGTGELLDLVCSELKKV 358
G GTGELLD + + L V
Sbjct: 151 GAGTGELLDQLITHLPTV 168
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 100/208 (48%), Gaps = 32/208 (15%)
Query: 154 TIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEF 213
T+G +P+ VAIVGRPNVGKS+L N L G RAIV G TRD +
Sbjct: 167 TVGMLPDTSEINVAIVGRPNVGKSSLLNALTGEKRAIVSSVSGTTRDAID---------- 216
Query: 214 MLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIE-RQATAAIEE 272
M+V+ G P + + I GI R+ V P +A AI
Sbjct: 217 MIVERPG-------NPETETESQLYRLIDTAGI---RRKKNVEYGPEFFGINRAFKAIRR 266
Query: 273 SCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF------ 326
+ V++F+VD G+T D+++A + ++ + ++ VNK ++ K + E+
Sbjct: 267 ADVVLFVVDALDGVTEQDQKLAGRIAED--GRAAVILVNKWDAIEKDTYTIYEYEKLLKN 324
Query: 327 --WSLGFSPLP-ISAISGTGTGELLDLV 351
+ + ++P+ +SA++G ++LDLV
Sbjct: 325 RLYFVEWAPMIFVSALTGKRVDKILDLV 352
>gi|428201101|ref|YP_007079690.1| ribosome-associated GTPase EngA [Pleurocapsa sp. PCC 7327]
gi|427978533|gb|AFY76133.1| ribosome-associated GTPase EngA [Pleurocapsa sp. PCC 7327]
Length = 452
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 95/194 (48%), Positives = 118/194 (60%), Gaps = 32/194 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL G +AIV DEPG+TRDR Y +FW + EF +VDTGG++
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAGDQQAIVHDEPGITRDRTYRPAFWRDREFQVVDTGGIV 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
ED E +PL I QA A+ E+ IF+VDG
Sbjct: 63 --------FDED--------TEFLPL-------------IREQAMLALAEASAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q+G T D EIADWLR+ + ++LAVNKCES +G++Q +EFW LG P PISAI G
Sbjct: 94 QSGPTTGDREIADWLRQQSVP--VLLAVNKCESVEQGLVQAAEFWELGLGEPYPISAIHG 151
Query: 342 TGTGELLDLVCSEL 355
GTGELLD + + L
Sbjct: 152 NGTGELLDDLIAYL 165
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 38/203 (18%)
Query: 158 VPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVD 217
+PE +VAI+GRPNVGKS+L N L G RAIV G TRD + + L+D
Sbjct: 171 LPEVPEIKVAIIGRPNVGKSSLLNALTGEKRAIVSPISGTTRDAIDTVIERKGKNYRLID 230
Query: 218 TGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVII 277
T G+ + + N+ G E + +A AI S V++
Sbjct: 231 TAGI----RRKKNV--------DYGAEFFGI---------------NRAFKAIRRSDVVL 263
Query: 278 FLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSL-------- 329
F++D G+T D ++A + + K ++ VNK ++ K + ++ L
Sbjct: 264 FVIDVLDGVTDQDLKLAGRIIDD--GKAAVIVVNKWDAVEKDSYTIYDYQKLIQDRLYFM 321
Query: 330 -GFSPLPISAISGTGTGELLDLV 351
+ +SA++G ++LDL+
Sbjct: 322 DWAEKIFVSAMTGQRVNKILDLI 344
>gi|443478697|ref|ZP_21068418.1| GTP-binding protein engA [Pseudanabaena biceps PCC 7429]
gi|443015977|gb|ELS30741.1| GTP-binding protein engA [Pseudanabaena biceps PCC 7429]
Length = 452
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 116/194 (59%), Gaps = 32/194 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA+VGRPNVGKS L NRL G AIV D+PGVTRDR+Y FWG HEF +VDTGG+
Sbjct: 3 LPIVAVVGRPNVGKSTLVNRLSGEQYAIVYDQPGVTRDRVYRECFWGAHEFQVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +P MI QA AI ES +IF+VDG
Sbjct: 62 --------VFDDET-------EFLP-------------MIREQAEIAIRESAAVIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
AG+T ADE++ WLR+ + ++LAVNKCE + G+ +EFW+LG P+P+S I G
Sbjct: 94 LAGITDADEQLGGWLRRQNIP--VLLAVNKCEGSKYGLSLAAEFWNLGLGEPIPMSGIHG 151
Query: 342 TGTGELLDLVCSEL 355
GTGELLD + L
Sbjct: 152 NGTGELLDELVKHL 165
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 94/196 (47%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VAI+GRPNVGKS+L N +G NR+IV G TRD + ++ L+DT GV
Sbjct: 179 KVAIIGRPNVGKSSLLNAFIGENRSIVSPISGTTRDAIDMSVERDGKKYRLIDTAGV--- 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + NI G+E + +A AI S V++ ++D
Sbjct: 236 -RRKKNI--------DYGIEFFSI---------------NRAFKAIGRSDVVLLVIDALD 271
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS--------LGFSPLP- 335
G+T D+++A R N K ++ VNK ++ K + ++ + + ++P+
Sbjct: 272 GVTDQDQKLAG--RINDEGKACVIVVNKWDAIEKDSYTIYDYTAEVKSRLMFVEYAPIIF 329
Query: 336 ISAISGTGTGELLDLV 351
+SA++G ++LD +
Sbjct: 330 VSALTGQRVTQILDRI 345
>gi|354564931|ref|ZP_08984107.1| GTP-binding protein engA [Fischerella sp. JSC-11]
gi|353550057|gb|EHC19496.1| GTP-binding protein engA [Fischerella sp. JSC-11]
Length = 453
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 97/198 (48%), Positives = 126/198 (63%), Gaps = 32/198 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL G AIV D+PGVTRDR Y +FW + EFM+VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAGEQSAIVYDQPGVTRDRTYLPAFWRDREFMVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ D E +PL I +QA AA+ E+ IF+VDG
Sbjct: 62 --------VFND-------DTEFLPL-------------IRQQAMAALAEASAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G TAADEEIA WLR+ + ++LAVNKCESP +G++Q +EFW+LG P P+SAI G
Sbjct: 94 RTGPTAADEEIATWLRQQPVP--VLLAVNKCESPEQGLIQAAEFWNLGLGEPFPVSAIHG 151
Query: 342 TGTGELLDLVCSELKKVE 359
+GTG+LLD + + L+ V+
Sbjct: 152 SGTGDLLDKLINYLQPVQ 169
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 88/199 (44%), Gaps = 44/199 (22%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVGRPNVGKS+L N VG RAIV G TRD + + L+DT G+
Sbjct: 178 KIAIVGRPNVGKSSLLNAFVGEERAIVSPISGTTRDAIDTEIERNGQTYRLIDTAGI--- 234
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + N+ G E + +A AI + V++ ++D
Sbjct: 235 -RKKKNV--------EYGPEFFSI---------------NRAFKAIRRADVVLLVIDAID 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF------------WSLGFS 332
G+T D+++A R + ++ VNK ++ K + ++ WS
Sbjct: 271 GVTEQDQKLAG--RVIEEGRACVVVVNKWDAVDKDSYTIYDYEKHLQERLHFTEWS---E 325
Query: 333 PLPISAISGTGTGELLDLV 351
+ +SA++G ++L+LV
Sbjct: 326 TIFVSALTGQRVEKILELV 344
>gi|434392243|ref|YP_007127190.1| GTP-binding protein engA [Gloeocapsa sp. PCC 7428]
gi|428264084|gb|AFZ30030.1| GTP-binding protein engA [Gloeocapsa sp. PCC 7428]
Length = 452
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 90/192 (46%), Positives = 118/192 (61%), Gaps = 32/192 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL G AIV DEPGVTRDR Y ++W + EF++VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAGAQDAIVYDEPGVTRDRTYSNAYWRDREFVVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I QA+ A+ E+ IF+VDG
Sbjct: 62 --------VFDD-------DTEFLPL-------------IREQASLALAEAVAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G T ADE IA+WLR+ + +++AVNKCESP +G+ Q ++FW LG P P+S I G
Sbjct: 94 QTGPTPADEAIAEWLRQQPVP--VLVAVNKCESPDQGLAQAAQFWELGLGEPYPVSGIHG 151
Query: 342 TGTGELLDLVCS 353
+GTGELLD + +
Sbjct: 152 SGTGELLDQLIT 163
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 38/67 (56%)
Query: 155 IGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFM 214
+ +PE +VAIVGRPNVGKS+L N VG RAIV G TRD + +
Sbjct: 168 VSELPETDEIKVAIVGRPNVGKSSLLNAFVGTQRAIVSPISGTTRDSIDTVIEREGKVYR 227
Query: 215 LVDTGGV 221
L+DT G+
Sbjct: 228 LIDTAGI 234
>gi|172035176|ref|YP_001801677.1| GTP-binding protein EngA [Cyanothece sp. ATCC 51142]
gi|354555681|ref|ZP_08974981.1| ribosome-associated GTPase EngA [Cyanothece sp. ATCC 51472]
gi|226706247|sp|B1X0B0.1|DER_CYAA5 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|171696630|gb|ACB49611.1| GTP-binding protein [Cyanothece sp. ATCC 51142]
gi|353552331|gb|EHC21727.1| ribosome-associated GTPase EngA [Cyanothece sp. ATCC 51472]
Length = 452
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 118/194 (60%), Gaps = 32/194 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL +AIV D+PG+TRDR Y +FW + +F +VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAKDRQAIVHDQPGITRDRTYRPAFWCDRDFQVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I QA AA+ E+ IF+VDG
Sbjct: 62 --------VFDD-------DTEFLPL-------------IREQAMAALTEASAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G TA D EI+DWLR+ + ++LAVNKCESP G++Q +EFW LG P PIS I G
Sbjct: 94 QLGPTAGDREISDWLRRQKVP--VLLAVNKCESPEMGLIQAAEFWELGLGEPYPISGIHG 151
Query: 342 TGTGELLDLVCSEL 355
+GTGELLD + + L
Sbjct: 152 SGTGELLDQLITYL 165
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 29/161 (18%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
V+I+GRPNVGKS+L N +G RAIV G TRD + G++ + L+DT G+
Sbjct: 179 VSIIGRPNVGKSSLLNAFLGEQRAIVSPISGTTRDAIDTVVERGDNTYRLIDTAGI---- 234
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+ + N+ G E + +A AI + V++ ++D G
Sbjct: 235 RRKKNV--------NYGAEFFSI---------------NRAFKAIRRADVVLLVIDAIDG 271
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
+T D ++AD R + I+ VNK ++ K + ++
Sbjct: 272 VTDQDIKLAD--RIIDEGRAAIIVVNKWDAVEKDSYTIYDY 310
>gi|427713062|ref|YP_007061686.1| ribosome-associated GTPase EngA [Synechococcus sp. PCC 6312]
gi|427377191|gb|AFY61143.1| ribosome-associated GTPase EngA [Synechococcus sp. PCC 6312]
Length = 445
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 94/188 (50%), Positives = 117/188 (62%), Gaps = 32/188 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS L NRL G +IV D+PGVTRDR Y +FW + EF++VDTGG++
Sbjct: 3 LPIVAIVGRPNVGKSTLVNRLTGEMASIVHDQPGVTRDRTYRPAFWQDREFVVVDTGGLV 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
S E +PL I +QA A+ E+ V IF+VDG
Sbjct: 63 FGDDS----------------EFLPL-------------IRQQAIVALNEAKVAIFMVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G TA D EIA WLR+ + ++LAVNKCESP++G+ Q +EFW LG P PIS+I G
Sbjct: 94 QIGPTALDLEIAAWLRQQPVP--VLLAVNKCESPQQGLAQAAEFWQLGLGEPYPISSIHG 151
Query: 342 TGTGELLD 349
+GTGELLD
Sbjct: 152 SGTGELLD 159
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 86/203 (42%), Gaps = 40/203 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
RVAI GRPNVGKS+L N +G RAIV G TRD + + L+DT G+
Sbjct: 178 RVAIAGRPNVGKSSLLNAFLGAERAIVSPISGTTRDAIDTVVERDGQTYRLIDTAGI--- 234
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIE-RQATAAIEESCVIIFLVDGQ 283
R +V P M +A AI + V++F++D
Sbjct: 235 -------------------------RRRKSVDYGPEMFGVHRAFQAIHRADVVLFILDAL 269
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLP-------- 335
+T D+ +A + + + +L VNK ++ K ++++ + L
Sbjct: 270 EDITEQDQRLAGHIAEQ--GRACVLVVNKWDAVEKDTYTINDYRHRVYQRLNFVDWAEAI 327
Query: 336 -ISAISGTGTGELLDLVCSELKK 357
+SA++G ++ D V +++
Sbjct: 328 FVSALTGQRVDKVFDFVNQAVEQ 350
>gi|56751772|ref|YP_172473.1| GTP-binding protein EngA [Synechococcus elongatus PCC 6301]
gi|81301149|ref|YP_401357.1| GTP-binding protein EngA [Synechococcus elongatus PCC 7942]
gi|81820595|sp|Q5N167.1|DER_SYNP6 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|123556312|sp|Q31KP9.1|DER_SYNE7 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|56686731|dbj|BAD79953.1| GTP-binding protein engA [Synechococcus elongatus PCC 6301]
gi|81170030|gb|ABB58370.1| Small GTP-binding protein domain [Synechococcus elongatus PCC 7942]
Length = 453
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 102/202 (50%), Positives = 125/202 (61%), Gaps = 32/202 (15%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL G AIV DEPGVTRDR Y +FW + +F +VDTGG+
Sbjct: 3 LPIVAILGRPNVGKSTLVNRLAGSREAIVHDEPGVTRDRTYQEAFWCDRDFTVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I QA A+ E+ + + +VDG
Sbjct: 62 --------VFDD-------DTEFLPL-------------IREQAELALAEAALAVLVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
QAGLTAAD EIADWLR + ++ I++AVNKCESP KG Q +EFWSLGF PLPIS+I G
Sbjct: 94 QAGLTAADNEIADWLR--HQNRPIVVAVNKCESPDKGAAQAAEFWSLGFGEPLPISSIHG 151
Query: 342 TGTGELLDLVCSELKKVEVCIG 363
+GTGELLD V L + G
Sbjct: 152 SGTGELLDRVLELLPPADEAAG 173
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 95/212 (44%), Gaps = 40/212 (18%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS+L N +G RAIV G TRD + + + LVDT G+
Sbjct: 180 VAIVGRPNVGKSSLLNSFLGEQRAIVSPIAGTTRDAIDTVIERNDQRYRLVDTAGI---- 235
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIE-RQATAAIEESCVIIFLVDGQA 284
R+ V P ++ AI + V + ++D
Sbjct: 236 ------------------------RRKRGVDYGPEFFGINRSFKAIRRADVCLLVIDVLD 271
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSE--------FWSLGFSPLP- 335
G+T D+++A + ++ + ++ VNK ++ K + E + L ++P+
Sbjct: 272 GVTDQDQKLAGRIEED--GRACVIVVNKWDAHEKDSSTIYEVERQLRDRLYFLDWAPMIF 329
Query: 336 ISAISGTGTGELLDLVCSELKKVEVCIGFLLI 367
+SA++G ++LD V + +++ +G +I
Sbjct: 330 VSALTGQRVEKILDQVNTVVEQHRRRVGTSVI 361
>gi|284929084|ref|YP_003421606.1| ribosome-associated GTPase EngA [cyanobacterium UCYN-A]
gi|284809543|gb|ADB95248.1| ribosome-associated GTPase EngA [cyanobacterium UCYN-A]
Length = 452
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 88/194 (45%), Positives = 115/194 (59%), Gaps = 32/194 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA++GRPNVGKS L NRL +AIV DEPG+TRDR+Y ++FW H+F++VDTGG+
Sbjct: 3 LPIVAVIGRPNVGKSTLVNRLAKNRQAIVHDEPGITRDRVYRQAFWRTHDFLVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ D E +PL I QA A+ E+ V +F+VDG
Sbjct: 62 --------VFND-------NTEFLPL-------------IREQAMTALSEASVAVFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G T D EI +WLR+ + ++LAVNKCESP G++Q ++FW LG P PIS I G
Sbjct: 94 QLGPTTGDYEIGNWLRQQKVP--VLLAVNKCESPEHGLIQAAQFWELGLGEPYPISGIHG 151
Query: 342 TGTGELLDLVCSEL 355
GTGE LD + L
Sbjct: 152 NGTGEFLDKLILHL 165
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 72/160 (45%), Gaps = 31/160 (19%)
Query: 159 PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDT 218
PE + V+IVGRPNVGKS+L N +G RAIV G TRD + + LVDT
Sbjct: 174 PEEI--NVSIVGRPNVGKSSLLNAFLGEKRAIVSPIAGTTRDVIDTIVERKGKVYRLVDT 231
Query: 219 GGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIF 278
G+ + + N+ G E + +A AI + V++
Sbjct: 232 AGI----RRKKNV--------EYGAEFFSI---------------NRAFKAIRRADVVLL 264
Query: 279 LVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
++D G+T D ++AD R + I+ VNK ++ K
Sbjct: 265 VIDAIDGVTEQDIKLAD--RIIDEGRSAIIVVNKWDAVEK 302
>gi|218245012|ref|YP_002370383.1| GTP-binding protein EngA [Cyanothece sp. PCC 8801]
gi|257058036|ref|YP_003135924.1| GTP-binding protein EngA [Cyanothece sp. PCC 8802]
gi|226741133|sp|B7K1S0.1|DER_CYAP8 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|218165490|gb|ACK64227.1| small GTP-binding protein [Cyanothece sp. PCC 8801]
gi|256588202|gb|ACU99088.1| small GTP-binding protein [Cyanothece sp. PCC 8802]
Length = 452
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 116/194 (59%), Gaps = 32/194 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL G AIV DEPG+TRDR Y FW + +F +VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTLANRLAGDQHAIVHDEPGITRDRTYRPGFWQDRDFQIVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I Q+ AA+ E+ IF+VDG
Sbjct: 62 --------VFDD-------DTEFLPL-------------IREQSLAALNEASAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISG 341
Q G T D EIADWLR+ + ++LAVNKCESP G++Q ++FW LG +P PIS I G
Sbjct: 94 QTGPTTGDLEIADWLRQQPVP--VLLAVNKCESPELGLIQATQFWELGLGNPYPISGIHG 151
Query: 342 TGTGELLDLVCSEL 355
GTGELLD + + L
Sbjct: 152 NGTGELLDDLITYL 165
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 95/198 (47%), Gaps = 38/198 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VAI+GRPNVGKS+L N L+G NRAIV G TRD + E + L+DT G+
Sbjct: 178 KVAIIGRPNVGKSSLLNALLGENRAIVSPISGTTRDAIDTVIQHNEQTYRLIDTAGI--- 234
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + N+ G E + +A AI V++F++D
Sbjct: 235 -RRKKNV--------EYGAEFFSI---------------NRAFKAIRRCDVVLFVIDAID 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL------PI-- 336
G+T D ++AD R + ++L +NK ++ K + E+ + FS L PI
Sbjct: 271 GVTDQDLKLAD--RIIEEGRSVVLVINKWDAVDKDSYTIYEYKTNIFSRLYFMEWAPIIF 328
Query: 337 -SAISGTGTGELLDLVCS 353
SA++G ++L+LV S
Sbjct: 329 VSAMTGQRVNKILELVNS 346
>gi|428773030|ref|YP_007164818.1| ribosome-associated GTPase EngA [Cyanobacterium stanieri PCC 7202]
gi|428687309|gb|AFZ47169.1| ribosome-associated GTPase EngA [Cyanobacterium stanieri PCC 7202]
Length = 452
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 92/199 (46%), Positives = 118/199 (59%), Gaps = 32/199 (16%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VA++GRPNVGKSAL NRL G AIV DEPG+TRDR Y +FW + EF +VDTGG+
Sbjct: 1 MLPIVAVIGRPNVGKSALVNRLSGEQDAIVFDEPGITRDRTYRPAFWQDREFQIVDTGGL 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ +D E +P I QA AA+ E+ IF+VD
Sbjct: 61 ---------VFDD-------DTEFLP-------------YIREQAQAALSEAIAAIFVVD 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ GLTA DEEIA WLR + +L VNKCES +G+ Q +EFW+LG P PISAI
Sbjct: 92 GKLGLTAGDEEIASWLRTQNVP--TVLVVNKCESENQGLAQAAEFWNLGLGEPFPISAIH 149
Query: 341 GTGTGELLDLVCSELKKVE 359
G GTGE+L+ + + V+
Sbjct: 150 GNGTGEMLEELIKHIPPVD 168
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 90/199 (45%), Gaps = 44/199 (22%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
RVAI+GRPNVGKS+L N L G +RAIV G TRD + GE + L+DT GV
Sbjct: 177 RVAIIGRPNVGKSSLLNALTGESRAIVSPVSGTTRDAIDMVVRRGETTYRLIDTAGV--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + N+ G E + +A AI+ + V++F++D
Sbjct: 234 -RRKKNV--------DYGAEFFGI---------------NRAFKAIKRADVVLFVIDILD 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF------------WSLGFS 332
G+T D ++A R + ++ NK ++ K + E+ W+
Sbjct: 270 GVTEQDLKLAG--RIIEEGRAAVIVANKWDAVEKDSHTIYEYQKMLDDRLFFMDWA---E 324
Query: 333 PLPISAISGTGTGELLDLV 351
+ +SA++G +LDLV
Sbjct: 325 RIFVSAMTGKRVDNILDLV 343
>gi|427419525|ref|ZP_18909708.1| ribosome-associated GTPase EngA [Leptolyngbya sp. PCC 7375]
gi|425762238|gb|EKV03091.1| ribosome-associated GTPase EngA [Leptolyngbya sp. PCC 7375]
Length = 453
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 90/196 (45%), Positives = 115/196 (58%), Gaps = 36/196 (18%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL G AIV D+PGVTRDR Y +FW + +FM+VDTGG++
Sbjct: 3 LPVVAIIGRPNVGKSTLVNRLAGAREAIVYDQPGVTRDRTYQPAFWQDRDFMVVDTGGLV 62
Query: 223 NVSKSQ--PNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLV 280
S+ P+I E QA A+ ES +F+V
Sbjct: 63 FADDSEFLPHIRE-------------------------------QAMLALAESKAAVFVV 91
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAI 339
DGQ GL +D EIA WLR+ + ++LAVNKCES +GI+Q +EFW+LG P +S I
Sbjct: 92 DGQEGLNESDREIASWLRQQSVP--VLLAVNKCESEDQGIIQATEFWALGLGEPYAVSGI 149
Query: 340 SGTGTGELLDLVCSEL 355
G GTGELLD + + L
Sbjct: 150 HGNGTGELLDELVTHL 165
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 91/199 (45%), Gaps = 44/199 (22%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VAIVGRPNVGKS+L N VG NRAIV + G TRD + E + L+DT G+
Sbjct: 178 KVAIVGRPNVGKSSLLNAFVGENRAIVSNISGTTRDTIDMVVRRKEAVYRLIDTAGI--- 234
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + N+ G E + +A AI S V++ ++D
Sbjct: 235 -RKKKNV--------NYGPEFFSI---------------NRAFKAIRRSDVVLLVIDALD 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF------------WSLGFS 332
G+T D+++A R + I+ VNK ++ K + E+ W+ +
Sbjct: 271 GMTEQDQKLAG--RIEDEGRACIIVVNKWDAIEKDSHTIYEYDKKLGGKIYFLDWA---T 325
Query: 333 PLPISAISGTGTGELLDLV 351
L +SA++G ++LD V
Sbjct: 326 RLYVSALTGQRVPKILDAV 344
>gi|428206730|ref|YP_007091083.1| ribosome-associated GTPase EngA [Chroococcidiopsis thermalis PCC
7203]
gi|428008651|gb|AFY87214.1| ribosome-associated GTPase EngA [Chroococcidiopsis thermalis PCC
7203]
Length = 452
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 90/198 (45%), Positives = 119/198 (60%), Gaps = 32/198 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS L NRL G AIV DEPGVTRDR Y ++W + EF++VDTGG+
Sbjct: 3 LPIVAIVGRPNVGKSTLANRLAGVQEAIVYDEPGVTRDRTYMPAYWCDREFLVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I +Q A+ E+ ++F+VDG
Sbjct: 62 --------VFDD-------DTEFLPL-------------IRQQVMVALSEASAVLFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G ADEE+A WLR+ + ++LAVNKCESP +G+MQ ++FW LG P +S I G
Sbjct: 94 QTGPLPADEEVAAWLRQQSLP--VLLAVNKCESPEQGLMQAAQFWELGLGEPYAVSGIHG 151
Query: 342 TGTGELLDLVCSELKKVE 359
GTG+LLD + + L + E
Sbjct: 152 NGTGDLLDQLIAHLPQPE 169
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 92/209 (44%), Gaps = 48/209 (22%)
Query: 159 PEHLLPR----VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFM 214
PE + P VAIVGRPNVGKS+L N VG +RAIV G TRD + +
Sbjct: 168 PEEITPTNEIAVAIVGRPNVGKSSLLNAFVGESRAIVSPISGTTRDSIDTVVEHQGQTYR 227
Query: 215 LVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESC 274
L+DT G+ + + N+ G E + +A AI +
Sbjct: 228 LIDTAGI----RKKKNV--------EYGPEFFGI---------------NRAFKAIRRAD 260
Query: 275 VIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF-------- 326
V++ ++D G+T D+++A + + + +L VNK ++ K + ++
Sbjct: 261 VVLLVIDALDGVTEQDQKLAGRIVEE--GRACVLVVNKWDAIEKDTYTIYDYEKNLRERM 318
Query: 327 ----WSLGFSPLPISAISGTGTGELLDLV 351
W+ + +SA +G ++L+LV
Sbjct: 319 QFLDWA---EAIFVSATTGQRVEKILELV 344
>gi|116075028|ref|ZP_01472288.1| GTP-binding protein EngA [Synechococcus sp. RS9916]
gi|116067225|gb|EAU72979.1| GTP-binding protein EngA [Synechococcus sp. RS9916]
Length = 455
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 94/195 (48%), Positives = 113/195 (57%), Gaps = 36/195 (18%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAI+GRPNVGKS L NRL AIV DEPGVTRDR Y +WG+ EF +VDTGG++
Sbjct: 4 PVVAIIGRPNVGKSTLVNRLCRSREAIVHDEPGVTRDRTYQDGYWGDREFKVVDTGGLVF 63
Query: 224 VSKSQ--PNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
S+ P I E QA A+ E+CV + +VD
Sbjct: 64 DDDSEFLPEIRE-------------------------------QANLAMAEACVALVIVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
GQ G+TAADE IA+WLR +LAVNKCESP +G+ +EFWSLG P PISAI
Sbjct: 93 GQQGMTAADESIAEWLRSQNCP--TLLAVNKCESPDQGLAMAAEFWSLGLGEPHPISAIH 150
Query: 341 GTGTGELLDLVCSEL 355
G GTG+LLD V + L
Sbjct: 151 GAGTGDLLDQVLTFL 165
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 66/155 (42%), Gaps = 31/155 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVGRPNVGKS+L N + G RAIV G TRD + + LVDT G+
Sbjct: 179 QMAIVGRPNVGKSSLLNAICGEQRAIVSPIRGTTRDTIDTNIERQGMPWKLVDTAGI--- 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIE-RQATAAIEESCVIIFLVDGQ 283
R +V P ++ AIE S V + ++D
Sbjct: 236 -------------------------RRRRSVNYGPEFFGINRSFKAIERSDVCVLVIDAL 270
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+T D+ +A R + ++ VNK ++ K
Sbjct: 271 DGVTEQDQRLAG--RIEDEGRACVVVVNKWDAVEK 303
>gi|16330798|ref|NP_441526.1| GTP-binding protein EngA [Synechocystis sp. PCC 6803]
gi|383322540|ref|YP_005383393.1| hypothetical protein SYNGTI_1631 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383325709|ref|YP_005386562.1| hypothetical protein SYNPCCP_1630 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383491593|ref|YP_005409269.1| hypothetical protein SYNPCCN_1630 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384436860|ref|YP_005651584.1| hypothetical protein SYNGTS_1631 [Synechocystis sp. PCC 6803]
gi|451814956|ref|YP_007451408.1| hypothetical protein MYO_116460 [Synechocystis sp. PCC 6803]
gi|8928101|sp|P74120.1|DER_SYNY3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|1653291|dbj|BAA18206.1| slr1974 [Synechocystis sp. PCC 6803]
gi|339273892|dbj|BAK50379.1| slr1974 [Synechocystis sp. PCC 6803]
gi|359271859|dbj|BAL29378.1| slr1974 [Synechocystis sp. PCC 6803 substr. GT-I]
gi|359275029|dbj|BAL32547.1| slr1974 [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|359278199|dbj|BAL35716.1| slr1974 [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|407961844|dbj|BAM55084.1| GTP-binding protein EngA [Bacillus subtilis BEST7613]
gi|451780925|gb|AGF51894.1| hypothetical protein MYO_116460 [Synechocystis sp. PCC 6803]
Length = 452
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/196 (46%), Positives = 116/196 (59%), Gaps = 36/196 (18%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS NRL G +AIV D+PG+TRDR Y +FW + +F +VDTGG++
Sbjct: 3 LPIVAIIGRPNVGKSTFVNRLAGNQQAIVHDQPGITRDRTYRPAFWRDRDFQVVDTGGLV 62
Query: 223 NVSKSQ--PNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLV 280
S+ P I E QA A+ E+ IF+V
Sbjct: 63 FNDDSEFLPEIRE-------------------------------QANLALAEAKAAIFVV 91
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAI 339
DGQ G TA+DEEIA WLR+ + +ILAVNKCESP +G +Q +EFW LG P P+SAI
Sbjct: 92 DGQQGPTASDEEIAQWLRQQSVP--VILAVNKCESPDQGAIQAAEFWHLGLGEPYPMSAI 149
Query: 340 SGTGTGELLDLVCSEL 355
G+GTG+LLD + L
Sbjct: 150 HGSGTGDLLDALLEYL 165
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 78/167 (46%), Gaps = 29/167 (17%)
Query: 159 PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDT 218
PE +VAIVGRPNVGKS+L N L G RAIV G TRD + ++ L+DT
Sbjct: 172 PEEDEIKVAIVGRPNVGKSSLLNALTGEQRAIVSPISGTTRDAIDMVVERNGQKYRLIDT 231
Query: 219 GGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIF 278
G+ + + N+ G E + +A AI + V++F
Sbjct: 232 AGI----RRKKNV--------DYGAEFFGI---------------NRAFKAIRRADVVLF 264
Query: 279 LVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSE 325
++D G+T D ++A + ++ + ++L +NK ++ K + E
Sbjct: 265 VLDVLDGVTEQDLKLAGRIIED--GRAVVLVINKWDAVEKDSYTIYE 309
>gi|113474219|ref|YP_720280.1| GTP-binding protein EngA [Trichodesmium erythraeum IMS101]
gi|123161345|sp|Q119L7.1|DER_TRIEI RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|110165267|gb|ABG49807.1| small GTP-binding protein [Trichodesmium erythraeum IMS101]
Length = 453
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/194 (47%), Positives = 115/194 (59%), Gaps = 32/194 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS + NRL AIV DEPG+TRDR Y ++W + EF +VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTIVNRLAESKDAIVHDEPGITRDRTYRNAYWEDREFQVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I QA AA+ E+ V IF+VDG
Sbjct: 62 --------VFDD-------NTEFLPL-------------IREQAMAALVEASVAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q GLT DEEIA WLR+ + I+LAVNKCES +G+ Q + FW LG P PIS I G
Sbjct: 94 QTGLTGGDEEIAQWLRQQTIP--ILLAVNKCESITEGLTQAAMFWELGLGEPYPISGIHG 151
Query: 342 TGTGELLDLVCSEL 355
GTGELLD + + L
Sbjct: 152 NGTGELLDDLITYL 165
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 78/165 (47%), Gaps = 29/165 (17%)
Query: 154 TIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEF 213
T G + E ++AIVGRPNVGKS+L N +G RAIV G TRD + +
Sbjct: 167 TQGEITETNQTKIAIVGRPNVGKSSLLNSFIGEKRAIVSPISGTTRDAIDTVVERNGKTY 226
Query: 214 MLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEES 273
L+DT G+ + + N+ G E + +A AI +
Sbjct: 227 RLIDTAGI----RKKKNV--------EYGAEFFGI---------------NRAFKAIRRA 259
Query: 274 CVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
V++F++D G+T D+++A+ + ++ + ++ VNK ++ K
Sbjct: 260 EVVMFVIDALDGVTEQDQKLANRIIED--GRACVIVVNKWDAIEK 302
>gi|428307266|ref|YP_007144091.1| GTP-binding protein engA [Crinalium epipsammum PCC 9333]
gi|428248801|gb|AFZ14581.1| GTP-binding protein engA [Crinalium epipsammum PCC 9333]
Length = 455
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/198 (47%), Positives = 126/198 (63%), Gaps = 32/198 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS + NRL G N AIV DE GVTRDR Y +FW + ++++VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTVANRLAGDNDAIVHDEAGVTRDRTYRPAFWQDRDYIVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I QA AA+ E+ IF+VDG
Sbjct: 62 --------VFDD-------DTEFLPL-------------IREQALAALAEASAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
QAGLT D+EIA+WLR++ + ++LAVNKCESP++G++Q SEFWSLG P P+S I G
Sbjct: 94 QAGLTTGDQEIAEWLRQHPIP--VVLAVNKCESPQQGLVQASEFWSLGLGEPFPMSGIHG 151
Query: 342 TGTGELLDLVCSELKKVE 359
GTGELL+ + + L V+
Sbjct: 152 NGTGELLEKLVTYLPSVD 169
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 35/57 (61%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+VAIVGRPNVGKS+L N L G NR+IV G TRD + + L+DT G+
Sbjct: 178 KVAIVGRPNVGKSSLLNALTGENRSIVSPISGTTRDAIDSVVERNGTTYRLIDTAGI 234
>gi|22298421|ref|NP_681668.1| GTP-binding protein EngA [Thermosynechococcus elongatus BP-1]
gi|34222551|sp|Q8DKI1.1|DER_THEEB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|22294600|dbj|BAC08430.1| GTP-binding protein [Thermosynechococcus elongatus BP-1]
Length = 449
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/194 (47%), Positives = 119/194 (61%), Gaps = 32/194 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA+VGRPNVGKS NRL G AIV DEPGVTRDR Y +FW + EF++VDTGG++
Sbjct: 3 LPIVAVVGRPNVGKSTFVNRLAGERDAIVHDEPGVTRDRTYRPAFWQDREFLVVDTGGLV 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
S + +PL I +QA A++E+ IF+VDG
Sbjct: 63 FDDDS----------------DFLPL-------------IRQQAELALQEATAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
QAG TA D EIA WLR+ + +++AVNKCES + G +Q +EFWSLG P PIS+I G
Sbjct: 94 QAGPTALDYEIAAWLRQ--LSLPVLVAVNKCESRQMGQVQAAEFWSLGLGEPYPISSIHG 151
Query: 342 TGTGELLDLVCSEL 355
+GTGELLD + + L
Sbjct: 152 SGTGELLDQLITYL 165
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 70/160 (43%), Gaps = 31/160 (19%)
Query: 157 NVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLV 216
+PE +VAI GRPNVGKS+L N L+G +RAIV G TRD + G ++ +
Sbjct: 170 TLPEAPEIQVAIAGRPNVGKSSLLNALIGSDRAIVSPISGTTRDAIDTVIEHGGTQYRFI 229
Query: 217 DTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIE-RQATAAIEESCV 275
DT G+ + VA P M +A AI S V
Sbjct: 230 DTAGI----------------------------RKRTHVAYGPEMFSVHRAFKAIHRSDV 261
Query: 276 IIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCES 315
++ ++D +T D+ +A + + +L VNK ++
Sbjct: 262 VLLVLDALEEITEQDQRLAGHIADQ--GRACVLIVNKWDA 299
>gi|427722459|ref|YP_007069736.1| GTP-binding protein engA [Leptolyngbya sp. PCC 7376]
gi|427354179|gb|AFY36902.1| GTP-binding protein engA [Leptolyngbya sp. PCC 7376]
Length = 454
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/194 (45%), Positives = 117/194 (60%), Gaps = 32/194 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +A++GRPNVGKS L NR+ G +AIV DEPG+TRDR Y FW + F +VDTGG+
Sbjct: 3 LPIIAVIGRPNVGKSTLVNRIAGDQQAIVHDEPGITRDRTYRPGFWQDRNFQIVDTGGI- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D+ E +PL I QA A+ E+ V IF+VDG
Sbjct: 62 --------VFDDIE-------EFLPL-------------IREQAAIALSEASVGIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G++AAD EIA+WLR+ + I++AVNKCES + Q +EFW LG P PISAI G
Sbjct: 94 KNGISAADTEIAEWLRQQKVP--IVIAVNKCESAEQSYAQAAEFWELGMGEPFPISAIHG 151
Query: 342 TGTGELLDLVCSEL 355
+GTG++LD V L
Sbjct: 152 SGTGDMLDKVIEHL 165
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 104/231 (45%), Gaps = 42/231 (18%)
Query: 155 IGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFM 214
+G++ E VAI+GRPNVGKS+L N + G RAIV G TRD + + ++
Sbjct: 168 MGDLEEDTTINVAIIGRPNVGKSSLLNAMTGEKRAIVSPISGTTRDAIDMLVERNDQQYR 227
Query: 215 LVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESC 274
L+DT G+ + + N+ G E + +A AI S
Sbjct: 228 LIDTAGI----RRKKNV--------NYGAEFFSI---------------NRAFKAIRRSD 260
Query: 275 VIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSE--------- 325
V++F+VD G+T D ++A R + ++L VNK ++ K ++E
Sbjct: 261 VVLFVVDVLDGVTEQDLKLAG--RIIEEGRAVVLIVNKWDAVEKDTYTINEHKKELQARL 318
Query: 326 FWSLGFSPLPISAISGTGTGELLDLV----CSELKKVEVCIGFLLICNAIT 372
F+ L ISA +G ++LDLV S ++V + +I A+T
Sbjct: 319 FFMEWAEMLFISAQTGQRVNKILDLVDQAAESHRRRVSTSVINEVIKEAVT 369
>gi|87125615|ref|ZP_01081460.1| putative GTP-binding protein [Synechococcus sp. RS9917]
gi|86166915|gb|EAQ68177.1| putative GTP-binding protein [Synechococcus sp. RS9917]
Length = 455
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/195 (48%), Positives = 112/195 (57%), Gaps = 36/195 (18%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAI+GRPNVGKS L NRL AIV DEPGVTRDR Y +WG+ EF LVDTGG++
Sbjct: 4 PVVAIIGRPNVGKSTLVNRLCRSREAIVHDEPGVTRDRTYQDGYWGDREFKLVDTGGLVF 63
Query: 224 VSKSQ--PNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
S+ P I E QA+ A+ E+ V + +VD
Sbjct: 64 DDDSEFLPEIRE-------------------------------QASLAMAEASVAVVIVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
GQ G+TAADE IA+WLR +LAVNKCESP +G+ +EFW LG P PISAI
Sbjct: 93 GQQGVTAADESIAEWLRSQACP--TLLAVNKCESPEQGLAMAAEFWGLGLGEPYPISAIH 150
Query: 341 GTGTGELLDLVCSEL 355
G GTGELLD V + L
Sbjct: 151 GAGTGELLDQVLTFL 165
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 67/155 (43%), Gaps = 31/155 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS+L N + G RAIV G TRD + R + LVDT G+
Sbjct: 179 QMAIIGRPNVGKSSLLNAICGEPRAIVSPIRGTTRDTIDTRLERNGLSWRLVDTAGI--- 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIE-RQATAAIEESCVIIFLVDGQ 283
R +V P ++ AIE S V + ++D
Sbjct: 236 -------------------------RRRRSVHYGPEFFGINRSFKAIERSDVCVLVIDAL 270
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+T D+ +A R + ++ VNK ++ K
Sbjct: 271 DGVTEQDQRLAG--RIEEEGRACVVVVNKWDAVEK 303
>gi|148241565|ref|YP_001226722.1| GTP-binding protein EngA [Synechococcus sp. RCC307]
gi|166225929|sp|A5GR60.1|DER_SYNR3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|147849875|emb|CAK27369.1| GTP-binding protein engA [Synechococcus sp. RCC307]
Length = 452
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 93/192 (48%), Positives = 112/192 (58%), Gaps = 36/192 (18%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL AIV DEPGVTRDR Y FWG F +VDTGG++
Sbjct: 3 LPVVAIIGRPNVGKSTLVNRLCRSRDAIVHDEPGVTRDRTYQEGFWGGRTFRVVDTGGLV 62
Query: 223 --NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLV 280
+ S+ P I E QA+ A+ E+CV + +V
Sbjct: 63 FDDDSEFLPEIRE-------------------------------QASLAMAEACVALVIV 91
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAI 339
DGQ GLTAADE IA WLR+ ++L VNKCESP +G+ +EFW+LG P PISAI
Sbjct: 92 DGQQGLTAADEAIAAWLRQQKCP--VLLGVNKCESPEQGLAMAAEFWALGLGEPKPISAI 149
Query: 340 SGTGTGELLDLV 351
G GTG+LLD V
Sbjct: 150 HGAGTGDLLDQV 161
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 82/187 (43%), Gaps = 40/187 (21%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVGRPNVGKS+L N + G NRAIV G TRD + + L+DT G+
Sbjct: 178 QMAIVGRPNVGKSSLLNTVCGENRAIVSPIRGTTRDTIDTSIEREGQSWKLLDTAGI--- 234
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIE-RQATAAIEESCVIIFLVDGQ 283
R +V P ++ AIE S V + ++D +
Sbjct: 235 -------------------------RRRRSVNYGPEFFGINRSFKAIERSDVCVLVIDAE 269
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSP-L 334
G+T D+ +A R + ++ VNK + K + S+ + L ++P L
Sbjct: 270 EGVTEQDQRLAG--RIEEEGRACLVVVNKWDLVEKDSHTMPAMEKELRSKLYFLEWAPML 327
Query: 335 PISAISG 341
ISA++G
Sbjct: 328 FISALTG 334
>gi|428224397|ref|YP_007108494.1| ribosome-associated GTPase EngA [Geitlerinema sp. PCC 7407]
gi|427984298|gb|AFY65442.1| ribosome-associated GTPase EngA [Geitlerinema sp. PCC 7407]
Length = 453
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 90/194 (46%), Positives = 113/194 (58%), Gaps = 32/194 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NR G +IV DEPGVTRDR Y R+FW + EFM+VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRFAGVTDSIVHDEPGVTRDRTYRRAFWQDREFMVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +P I QA AA+ E+ IF+ DG
Sbjct: 62 --------VFDD-------DTEFLP-------------YIREQAMAALSEARAAIFVADG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G T AD IA WLR++ + F LA+NKCESP +G+ Q ++FW LG P P+S I G
Sbjct: 94 QMGPTEADHAIATWLRQHPLPVF--LAINKCESPEQGVTQAAQFWELGLGEPYPVSGIHG 151
Query: 342 TGTGELLDLVCSEL 355
GTG+LLD + L
Sbjct: 152 NGTGDLLDALIQHL 165
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 91/206 (44%), Gaps = 38/206 (18%)
Query: 155 IGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFM 214
I + E RVAIVGRPNVGKS+L N VG NRAIV G TRD + G+ +
Sbjct: 168 ISEIEETPETRVAIVGRPNVGKSSLLNAFVGENRAIVSPVSGTTRDAIDMLVERGDKTYR 227
Query: 215 LVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESC 274
L+DT G+ + + N+ G E + ++ AI +
Sbjct: 228 LIDTAGI----RKKKNV--------DYGPEFFGI---------------NRSFKAIRRAD 260
Query: 275 VIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL 334
V++ ++D G+T D+++A R + ++ VNK ++ K + +F + L
Sbjct: 261 VVLLVIDAVDGVTEQDQKLAG--RIADEGRACVVVVNKWDAVEKDSYTIYDFERMVRDRL 318
Query: 335 PI---------SAISGTGTGELLDLV 351
SA++G ++ DLV
Sbjct: 319 YFVNWADMIFTSALTGQRVPKIFDLV 344
>gi|194476538|ref|YP_002048717.1| GTP-binding protein EngA [Paulinella chromatophora]
gi|171191545|gb|ACB42507.1| GTP-binding protein EngA [Paulinella chromatophora]
Length = 456
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 94/194 (48%), Positives = 116/194 (59%), Gaps = 32/194 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
L VAI+GRPNVGKS L NRL AIV DE GVTRDR Y + FWGE +F +VDTGG++
Sbjct: 3 LSTVAIIGRPNVGKSTLANRLCQSREAIVHDELGVTRDRTYQKGFWGEKQFQVVDTGGLV 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
S E +P I +QA A+ E+ V + +VDG
Sbjct: 63 FDDDS----------------EFLP-------------EIRKQAIIALSEATVAVVIVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISG 341
Q GLTAADE IA++LR + I+LAVNKCESP +G+ +EFWSLG +P PISAI G
Sbjct: 94 QQGLTAADETIAEFLRGHSCP--ILLAVNKCESPEQGLSMAAEFWSLGLGTPFPISAIHG 151
Query: 342 TGTGELLDLVCSEL 355
GTGELLD + + L
Sbjct: 152 AGTGELLDKIVTYL 165
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 85/192 (44%), Gaps = 40/192 (20%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
E+ + ++AIVGRPNVGKS+L N + G RAIV G TRD + + + L+DT
Sbjct: 173 ENDIVQLAIVGRPNVGKSSLLNAICGETRAIVSQIRGTTRDTIDTYVEREGYHWRLIDTA 232
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIE-RQATAAIEESCVIIF 278
G+ R +V P + ++ AIE S V +
Sbjct: 233 GI----------------------------RRRRSVDYGPELFSINRSFKAIERSDVCLL 264
Query: 279 LVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLG 330
++D G+T D+ +A R + I+ +NK ++ K + S+ + L
Sbjct: 265 IIDALDGVTEQDQRLAG--RIEEEGRACIIIINKWDAIEKDSHTMSAMEKDLRSKLYFLN 322
Query: 331 FSP-LPISAISG 341
++P L ISA+ G
Sbjct: 323 WAPMLFISALKG 334
>gi|434389307|ref|YP_007099918.1| ribosome-associated GTPase EngA [Chamaesiphon minutus PCC 6605]
gi|428020297|gb|AFY96391.1| ribosome-associated GTPase EngA [Chamaesiphon minutus PCC 6605]
Length = 452
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 90/188 (47%), Positives = 112/188 (59%), Gaps = 32/188 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL G +IV DEPGVTRDR Y R+FW + EF++VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAGARESIVHDEPGVTRDRTYRRAFWQDREFVVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I QA A+ ++ IF+VDG
Sbjct: 62 --------VFDDET-------EFLPL-------------IREQAMTALSQASAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G+T D+EIA WLR + F+ AVNKCES G MQ ++FW LG P IS+I G
Sbjct: 94 QQGITGGDQEIASWLRVQKIPVFV--AVNKCESETVGAMQTADFWELGIGEPYAISSIHG 151
Query: 342 TGTGELLD 349
+GTGELLD
Sbjct: 152 SGTGELLD 159
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 87/197 (44%), Gaps = 40/197 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R+AI+GRPNVGKS+L N +G NR+IV G TRD + + L+DT G+
Sbjct: 177 RIAIIGRPNVGKSSLLNAFLGENRSIVSPISGTTRDAIDTVITRNGANYRLIDTAGI--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIE-RQATAAIEESCVIIFLVDGQ 283
R+ V P +A AI+ V++ +++
Sbjct: 234 -------------------------RRKKNVDYGPEFFGINRAFKAIDRCDVVLLVLNAV 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----LGFSPLP--- 335
G+T D+++A R + + ++ VNK ++ K + ++ L F+
Sbjct: 269 DGVTEQDQKLAG--RISEEGRACVIVVNKWDAVEKDSYTIYDYQEQLNSRLNFTEWAENI 326
Query: 336 -ISAISGTGTGELLDLV 351
+SA++G ++L++V
Sbjct: 327 FVSALTGQRVDKILEIV 343
>gi|317968893|ref|ZP_07970283.1| GTP-binding protein Der [Synechococcus sp. CB0205]
Length = 454
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 92/200 (46%), Positives = 113/200 (56%), Gaps = 36/200 (18%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL AIV DEPGVTRDR Y + +W + F +VDTGG++
Sbjct: 3 LPVVAIIGRPNVGKSTLVNRLCRSREAIVHDEPGVTRDRTYQQGYWRDRHFKVVDTGGLV 62
Query: 223 NVSKSQ--PNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLV 280
S+ P I E QA A+ E+ V + +
Sbjct: 63 FDDDSEFLPEIRE-------------------------------QANLALSEASVAVVIA 91
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAI 339
DGQ GLTAADE IA+WLR + + ++LAVNKCESP G+ +EFWSLG P PISAI
Sbjct: 92 DGQQGLTAADESIAEWLRGHNVP--VLLAVNKCESPEAGLAMAAEFWSLGLGEPFPISAI 149
Query: 340 SGTGTGELLDLVCSELKKVE 359
G GTG+LLD + L E
Sbjct: 150 HGAGTGDLLDRMVDHLPAAE 169
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 65/162 (40%), Gaps = 45/162 (27%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVGRPNVGKS+L N + G RAIV G TRD
Sbjct: 178 QMAIVGRPNVGKSSLLNAVCGEKRAIVSPIRGTTRD------------------------ 213
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIE--------RQATAAIEESCVI 276
I T+I EG P + A R + ++ AIE S V
Sbjct: 214 -----------TIDTSIEREGKPWKLLDTAGIRRRRSVNYGPEYFGINRSFKAIERSDVC 262
Query: 277 IFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
+ ++D G+T D+ +A R + ++ VNK ++ K
Sbjct: 263 VLVIDALDGVTEQDQRLAG--RIEEEGRACVVVVNKWDAIEK 302
>gi|427739309|ref|YP_007058853.1| ribosome-associated GTPase EngA [Rivularia sp. PCC 7116]
gi|427374350|gb|AFY58306.1| ribosome-associated GTPase EngA [Rivularia sp. PCC 7116]
Length = 456
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 93/197 (47%), Positives = 116/197 (58%), Gaps = 32/197 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS + NRL AIV DEPGVTRDR Y +FW + EFM+VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTIVNRLAKQQSAIVHDEPGVTRDRTYLSAFWRDREFMVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I D E +P I +QA A+ E+ IF+VDG
Sbjct: 62 --------IFND-------DTEFLPF-------------IRQQAMVALSEASAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G T AD EIA+WLR + + ++LAVNKCESP +G+M ++FW LG P P+S I G
Sbjct: 94 QTGATPADLEIAEWLRHHPVP--VLLAVNKCESPDQGLMLAADFWQLGLGEPYPMSGIHG 151
Query: 342 TGTGELLDLVCSELKKV 358
GTGELLD + + L V
Sbjct: 152 NGTGELLDELINFLPPV 168
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 92/202 (45%), Gaps = 38/202 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS+L N G RAIV G TRD + E + L+DT G+
Sbjct: 178 KIAIIGRPNVGKSSLLNSFAGEERAIVSPISGTTRDAIDTFIEKDEQVYRLIDTAGI--- 234
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + NI G E + +A AI S V++F++D
Sbjct: 235 -RKKKNI--------DYGTEFFSI---------------NRAFKAIRRSDVVLFVIDALD 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----LGFS----PLP 335
G+T D+++A R + I VNK ++ K V ++ L FS +
Sbjct: 271 GITDQDQKLAG--RIIDEGRACITVVNKWDAYEKDSYSVYDYQKYLSGRLHFSDWSETIF 328
Query: 336 ISAISGTGTGELLDLVCSELKK 357
+SA++G ++LDLV +++
Sbjct: 329 VSALTGQRVLKILDLVNQAIEQ 350
>gi|78213545|ref|YP_382324.1| GTP-binding protein EngA [Synechococcus sp. CC9605]
gi|123577697|sp|Q3AI13.1|DER_SYNSC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|78198004|gb|ABB35769.1| Small GTP-binding protein domain [Synechococcus sp. CC9605]
Length = 455
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/195 (48%), Positives = 113/195 (57%), Gaps = 36/195 (18%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAI+GRPNVGKS L NRL AIV D+PGVTRDR Y +WG+ EF +VDTGG++
Sbjct: 4 PVVAIIGRPNVGKSTLVNRLCRSREAIVHDQPGVTRDRTYQDGYWGDREFKVVDTGGLVF 63
Query: 224 VSKSQ--PNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
S+ P I E QA A+EE+ V + +VD
Sbjct: 64 DDDSEFLPEIRE-------------------------------QAALALEEASVALVIVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
GQ GLTAADE IA++LR + +LAVNKCESP +G+ EFWSLG P PISAI
Sbjct: 93 GQQGLTAADESIAEFLRSHRCP--TLLAVNKCESPEQGLAMAGEFWSLGLGEPHPISAIH 150
Query: 341 GTGTGELLDLVCSEL 355
G GTGELLD V + L
Sbjct: 151 GAGTGELLDQVLTFL 165
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 68/155 (43%), Gaps = 31/155 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS+L N + G RAIV G TRD + + LVDT G+
Sbjct: 179 QMAIIGRPNVGKSSLLNAICGEQRAIVSPIRGTTRDTIDTSIIRENRPWRLVDTAGI--- 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIE-RQATAAIEESCVIIFLVDGQ 283
R +V P ++ AIE S V + ++D
Sbjct: 236 -------------------------RRRRSVNYGPEFFGINRSFKAIERSDVCVLVIDAL 270
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+T D+ +A + ++ + ++ VNK ++ K
Sbjct: 271 DGVTEQDQRLAGRIEED--GRACVVVVNKWDALEK 303
>gi|443322324|ref|ZP_21051349.1| ribosome-associated GTPase EngA [Gloeocapsa sp. PCC 73106]
gi|442787929|gb|ELR97637.1| ribosome-associated GTPase EngA [Gloeocapsa sp. PCC 73106]
Length = 453
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/194 (46%), Positives = 112/194 (57%), Gaps = 32/194 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL +AIV DEPG+TRDR Y +FW + +F +VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAKDKQAIVHDEPGITRDRTYQPAFWQDRDFTIVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E IP I Q A+ E+ IF+VDG
Sbjct: 62 --------VFDD-------DTELIP-------------QIREQTMLALNEATAAIFIVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G+T D EIA WLR+ + ++L VNKCES G++Q +EFW LG PLP SAI G
Sbjct: 94 QVGVTTGDMEIASWLRQQSVP--VLLGVNKCESVATGLVQATEFWELGLGEPLPFSAIHG 151
Query: 342 TGTGELLDLVCSEL 355
GTGELLDL+ L
Sbjct: 152 NGTGELLDLLIEYL 165
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 81/179 (45%), Gaps = 36/179 (20%)
Query: 153 TTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHE 212
T I +PE +VAIVGRPNVGKS+LFN L G NR IV G TRD +
Sbjct: 169 TEIEEIPE---IKVAIVGRPNVGKSSLFNNLTGENRCIVSPISGTTRDAIDTVIEHDGQV 225
Query: 213 FMLVDTGGVLNVSKSQPNIMEDLAITTTIGME--GIPLATREAAVARMPSMIERQATAAI 270
+ L+DT G+ + + N+ G+E GI + R AI
Sbjct: 226 YRLIDTAGI----RKKKNV--------EYGVEFFGINRSFR-----------------AI 256
Query: 271 EESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSL 329
S V++ ++D +T D ++A R + +IL VNK ++ K + E+ L
Sbjct: 257 HRSDVVLLVIDALDEVTDQDLKLA--ARVIEEGRAVILVVNKWDAVDKDSYTIYEYTKL 313
>gi|170076756|ref|YP_001733394.1| GTP-binding protein EngA [Synechococcus sp. PCC 7002]
gi|238692797|sp|B1XLH8.1|DER_SYNP2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|169884425|gb|ACA98138.1| GTPase of unknown function [Synechococcus sp. PCC 7002]
Length = 453
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 118/194 (60%), Gaps = 32/194 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +A++GRPNVGKS L NR+ G +AIV D+PG+TRDR Y FW + F +VDTGG+
Sbjct: 3 LPIIAVIGRPNVGKSTLVNRIAGDQQAIVHDQPGITRDRTYRPGFWQDRNFQIVDTGGI- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I QA A+ E+ V +F+VDG
Sbjct: 62 --------VFDDHE-------EFLPL-------------IREQAAIALAEAAVALFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISG 341
QAGL AAD+EIADWLR+ + ++LAVNKCES +G Q +EFW LG P PISAI G
Sbjct: 94 QAGLNAADQEIADWLRQQNVP--VVLAVNKCESLEQGYTQAAEFWELGMEEPFPISAIHG 151
Query: 342 TGTGELLDLVCSEL 355
+GTG+LLD V L
Sbjct: 152 SGTGDLLDKVIEYL 165
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 44/210 (20%)
Query: 154 TIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEF 213
TI +V E VAI+GRPNVGKS+L N L G RAIV G TRD + ++
Sbjct: 167 TITDVEEDTTINVAIIGRPNVGKSSLLNALTGEQRAIVSPISGTTRDAIDTIIERNGQQY 226
Query: 214 MLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEES 273
L+DT G+ + + N+ G E + +A AI +
Sbjct: 227 RLIDTAGI----RRKKNV--------DYGAEFFSI---------------NRAFKAIRRA 259
Query: 274 CVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF------- 326
V++F++D G+T D ++A R + +I+ NK ++ K ++++
Sbjct: 260 DVVLFVIDVLDGVTEQDLKLAG--RIIDEGRAVIIVANKWDAVEKDTYTINQYRKELQAR 317
Query: 327 -----WSLGFSPLPISAISGTGTGELLDLV 351
W+ L ISA +G ++LDLV
Sbjct: 318 LFFMEWA---EMLFISAQTGQRVNKILDLV 344
>gi|119494580|ref|ZP_01624713.1| GTP-binding protein EngA [Lyngbya sp. PCC 8106]
gi|119452086|gb|EAW33297.1| GTP-binding protein EngA [Lyngbya sp. PCC 8106]
Length = 453
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 90/198 (45%), Positives = 118/198 (59%), Gaps = 32/198 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS L NRL +IV D+PG+TRDR Y ++W + EF +VDTGG+
Sbjct: 3 LPIVAIVGRPNVGKSTLVNRLSETQDSIVHDQPGITRDRTYRYAYWQDREFSVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I +D E +PL I Q A+ E+ V IF+VDG
Sbjct: 62 --------IFDD-------DTEFLPL-------------IREQVMVALAEATVAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISG 341
Q GLT DE IA WLR++ + ++LAVNKCESP G++Q +FW LG +P P+S+I G
Sbjct: 94 QTGLTGGDEAIASWLREHSVP--VLLAVNKCESPTTGLIQSMQFWELGLGNPFPLSSIHG 151
Query: 342 TGTGELLDLVCSELKKVE 359
+GTGELLD + + K +
Sbjct: 152 SGTGELLDELIKYIPKAD 169
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 88/199 (44%), Gaps = 44/199 (22%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
RVAIVGRPNVGKS+L N +G NRAIV G TRD + + LVDT G+
Sbjct: 178 RVAIVGRPNVGKSSLLNAFLGENRAIVSPISGTTRDAIDTVVERNGKTYRLVDTAGI--- 234
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + N+ G E + +A AI S +++ ++D
Sbjct: 235 -RRKKNV--------EYGAEFFGI---------------NRAFKAIRRSNIVLLIIDAID 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF------------WSLGFS 332
+T D ++A+ R + + ++ VNK + K + E+ W+
Sbjct: 271 RVTEQDLKLAN--RVSEEGRACVIVVNKWDIIEKDTYTILEYEREVKARLYFMDWA---K 325
Query: 333 PLPISAISGTGTGELLDLV 351
+ +SA++G +++DLV
Sbjct: 326 TIFVSAMTGQRVEKIIDLV 344
>gi|260434834|ref|ZP_05788804.1| ribosome-associated GTPase EngA [Synechococcus sp. WH 8109]
gi|260412708|gb|EEX06004.1| ribosome-associated GTPase EngA [Synechococcus sp. WH 8109]
Length = 455
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/193 (48%), Positives = 112/193 (58%), Gaps = 36/193 (18%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAI+GRPNVGKS L NRL AIV D+PGVTRDR Y +WG+ EF +VDTGG++
Sbjct: 4 PVVAIIGRPNVGKSTLVNRLCRSREAIVHDQPGVTRDRTYQDGYWGDREFKVVDTGGLVF 63
Query: 224 VSKSQ--PNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
S+ P I E QA A+EE+ V + +VD
Sbjct: 64 DDDSEFLPEIRE-------------------------------QAALALEEASVALVIVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
GQ GLTAADE IA++LR + +LAVNKCESP +G+ EFWSLG P PISAI
Sbjct: 93 GQQGLTAADESIAEFLRSHRCP--TLLAVNKCESPEQGLAMAGEFWSLGLGEPHPISAIH 150
Query: 341 GTGTGELLDLVCS 353
G GTGELLD V +
Sbjct: 151 GAGTGELLDQVLT 163
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 68/155 (43%), Gaps = 31/155 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS+L N + G RAIV G TRD + + LVDT G+
Sbjct: 179 QMAIIGRPNVGKSSLLNAICGEQRAIVSPIRGTTRDTIDTSIIRENRPWRLVDTAGI--- 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIE-RQATAAIEESCVIIFLVDGQ 283
R +V P ++ AIE S V + ++D
Sbjct: 236 -------------------------RRRRSVNYGPEFFGINRSFKAIERSDVCVLVIDAL 270
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+T D+ +A + ++ + ++ VNK ++ K
Sbjct: 271 DGVTEQDQRLAGRIEED--GRACVVVVNKWDAVEK 303
>gi|318042392|ref|ZP_07974348.1| GTP-binding protein Der [Synechococcus sp. CB0101]
Length = 454
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/204 (45%), Positives = 113/204 (55%), Gaps = 36/204 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL AIV DEPGVTRDR Y +W + F +VDTGG++
Sbjct: 3 LPVVAIIGRPNVGKSTLVNRLCKSREAIVHDEPGVTRDRTYQDGYWRDRHFKVVDTGGLV 62
Query: 223 NVSKSQ--PNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLV 280
S+ P I E QA A+ E+ V + +
Sbjct: 63 FDDDSEFLPEIRE-------------------------------QANLALSEASVAVVIA 91
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAI 339
DGQ GLTAADE IA+WLR + + ++LAVNKCESP G+ +EFWSLG P PISAI
Sbjct: 92 DGQQGLTAADESIAEWLRGHNVP--VLLAVNKCESPEAGLSMAAEFWSLGLGEPYPISAI 149
Query: 340 SGTGTGELLDLVCSELKKVEVCIG 363
G GTG+LLD + L E G
Sbjct: 150 HGAGTGDLLDKLVDHLPPTEELTG 173
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 70/155 (45%), Gaps = 31/155 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS+L N + G RAIV G TRD + H + ++DT G+
Sbjct: 178 QLAIIGRPNVGKSSLLNAICGEKRAIVSPIRGTTRDTIDTTIEREGHTWKILDTAGI--- 234
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIE-RQATAAIEESCVIIFLVDGQ 283
R+ +V P ++ AIE S V + ++D
Sbjct: 235 -------------------------RRKRSVNYGPEFFGINRSFKAIERSDVCVLVIDVL 269
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+T D+ +A + ++ + ++ VNK ++ K
Sbjct: 270 DGVTEQDQRLAGRIEED--GRACVVVVNKWDAIEK 302
>gi|159902929|ref|YP_001550273.1| GTP-binding protein EngA [Prochlorococcus marinus str. MIT 9211]
gi|226706248|sp|A9BE09.1|DER_PROM4 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|159888105|gb|ABX08319.1| GTP-binding protein (HSR1-related) [Prochlorococcus marinus str.
MIT 9211]
Length = 456
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/189 (47%), Positives = 115/189 (60%), Gaps = 32/189 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAI+GRPNVGKS L NRL G AIV D+PGVTRDR Y +FW + EF +VDTGG++
Sbjct: 4 PIVAIIGRPNVGKSTLVNRLCGSREAIVDDQPGVTRDRTYQDAFWADREFKVVDTGGLVF 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+S E +P I +QA A+ E+ V + +VDGQ
Sbjct: 64 DDES----------------EFLP-------------EIRQQAKLALSEASVALIVVDGQ 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T AD+EIA WLR + + ++AVNKCESP +G+ ++FWSLG P P+SAI G+
Sbjct: 95 EGVTTADKEIASWLR--HCECPTLVAVNKCESPEQGLAMAADFWSLGLGEPYPVSAIHGS 152
Query: 343 GTGELLDLV 351
GTGELLD V
Sbjct: 153 GTGELLDQV 161
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 68/155 (43%), Gaps = 31/155 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS+L N + G RAIV G TRD + + + L+DT G+
Sbjct: 179 QLAIIGRPNVGKSSLLNSICGETRAIVSSIRGTTRDTIDTLLKREQQAWKLIDTAGI--- 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIE-RQATAAIEESCVIIFLVDGQ 283
R +V+ P ++ AIE S V + ++D
Sbjct: 236 -------------------------RRRRSVSYGPEYFGINRSLKAIERSDVCLLVIDAL 270
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+T D+ +A R K ++ VNK ++ K
Sbjct: 271 DGVTEQDQRLAG--RIEQEGKACLVVVNKWDAVEK 303
>gi|158339018|ref|YP_001520195.1| GTP-binding protein EngA [Acaryochloris marina MBIC11017]
gi|189037135|sp|B0C1P2.1|DER_ACAM1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|158309259|gb|ABW30876.1| GTP-binding protein engA [Acaryochloris marina MBIC11017]
Length = 453
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/191 (47%), Positives = 111/191 (58%), Gaps = 32/191 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS L NRL G AIV D PGVTRDR Y + W +F LVDTGG+
Sbjct: 3 LPIVAIVGRPNVGKSTLVNRLTGMMDAIVHDSPGVTRDRTYRPALWNGRDFSLVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +P I +Q A+ E+ V++ +VDG
Sbjct: 62 --------VFDDQT-------EFLPF-------------IRQQVMIALAEATVVVMVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISG 341
QAG T AD EIA WLR+ D ++LAVNKCESP +GI Q ++FW L PLP+S I G
Sbjct: 94 QAGPTPADHEIAHWLRQQ--DTPVLLAVNKCESPEQGITQAAQFWELSLDEPLPVSGIHG 151
Query: 342 TGTGELLDLVC 352
GTG+LLD V
Sbjct: 152 NGTGDLLDQVV 162
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 40/205 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VA+VGRPNVGKS+L N VG NR+IV G TRD + GE + +DT G+
Sbjct: 178 KVALVGRPNVGKSSLLNAFVGENRSIVSPISGTTRDTIDMVVRRGEQTYRFIDTAGI--- 234
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIE-RQATAAIEESCVIIFLVDGQ 283
R+ V+ P +A AI S V++F++D
Sbjct: 235 -------------------------RRKKNVSYGPEFFGINRAFKAIRRSQVVLFVIDAL 269
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----LGFSPLP--- 335
G+T D+++A + + + +L VNK ++ K ++EF L F
Sbjct: 270 DGVTEQDQKLAGRIIDD--GRACVLVVNKWDAVTKDTYTINEFSKQIRSRLNFMEWAEMI 327
Query: 336 -ISAISGTGTGELLDLVCSELKKVE 359
+SA +G ++L+LV + ++ E
Sbjct: 328 FVSAQTGQRVEKILNLVDTAARQFE 352
>gi|359461399|ref|ZP_09249962.1| GTP-binding protein Der [Acaryochloris sp. CCMEE 5410]
Length = 453
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/191 (47%), Positives = 111/191 (58%), Gaps = 32/191 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS L NRL G AIV D PGVTRDR Y + W +F LVDTGG+
Sbjct: 3 LPIVAIVGRPNVGKSTLVNRLTGMMDAIVHDSPGVTRDRTYRPALWNGRDFSLVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +P I +Q A+ E+ V++ +VDG
Sbjct: 62 --------VFDDQT-------EFLPF-------------IRQQVMIALAEATVVVMVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISG 341
QAG T AD EIA WLR+ D ++LAVNKCESP +GI Q ++FW L PLP+S I G
Sbjct: 94 QAGPTPADHEIAHWLRQQ--DTPVLLAVNKCESPEQGITQAAQFWELSLDEPLPVSGIHG 151
Query: 342 TGTGELLDLVC 352
GTG+LLD V
Sbjct: 152 NGTGDLLDQVV 162
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 40/205 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VA+VGRPNVGKS+L N VG NR+IV G TRD + GE + +DT G+
Sbjct: 178 KVALVGRPNVGKSSLLNAFVGENRSIVSPISGTTRDTIDMVVRRGEQAYRFIDTAGI--- 234
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIE-RQATAAIEESCVIIFLVDGQ 283
R+ V+ P +A AI S V++F++D
Sbjct: 235 -------------------------RRKKNVSYGPEFFGINRAFKAIRRSQVVLFVIDAL 269
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----LGFSPLP--- 335
G+T D+++A + + + +L VNK ++ K ++EF L F
Sbjct: 270 DGVTEQDQKLAGRIIDD--GRACVLVVNKWDAVTKDTYTINEFSKQIRSRLNFMEWAEMI 327
Query: 336 -ISAISGTGTGELLDLVCSELKKVE 359
+SA +G ++L+LV + ++ E
Sbjct: 328 FVSAQTGQRVEKILNLVDTAARQFE 352
>gi|423064932|ref|ZP_17053722.1| small GTP-binding protein [Arthrospira platensis C1]
gi|406714175|gb|EKD09343.1| small GTP-binding protein [Arthrospira platensis C1]
Length = 453
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 89/193 (46%), Positives = 114/193 (59%), Gaps = 32/193 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAI+GRPNVGKS L NRL AIV D+PG+TRDR Y ++W + EF +VDTGG+
Sbjct: 4 PIVAIIGRPNVGKSTLVNRLTQTQDAIVHDQPGMTRDRTYRSAYWQDREFTVVDTGGL-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ +D E +PL I QA A+ E+ IF+VDGQ
Sbjct: 62 -------VFDD-------DTEFLPL-------------IREQALIALGEATAAIFVVDGQ 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGT 342
G T DE IA WLR+ + I+LAVNKCESP +G+ Q ++FW LG +P PIS+I G+
Sbjct: 95 TGPTGGDEAIASWLRQQKVP--ILLAVNKCESPTQGLTQAAQFWELGLGNPFPISSIHGS 152
Query: 343 GTGELLDLVCSEL 355
GTGELLD + L
Sbjct: 153 GTGELLDALIENL 165
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 86/196 (43%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
RVAIVGRPNVGKS+L N +G RAIV G TRD + + + LVDT G+
Sbjct: 178 RVAIVGRPNVGKSSLLNTFLGQERAIVSPISGTTRDAIDTIVEHNGNTYRLVDTAGIRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ G E + +A AI + V++F++D
Sbjct: 238 KHVE------------YGAEFFGI---------------NRAFKAIRRADVVLFVIDAVE 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLP--------- 335
G+T D+++A + + + ++ VNK ++ K + E+ + S L
Sbjct: 271 GVTDQDQKLAGRISDD--GRACVIVVNKWDAVEKDSYTILEYEKVMRSRLYFLDWADMIF 328
Query: 336 ISAISGTGTGELLDLV 351
+SA++G ++ LV
Sbjct: 329 VSAMTGQRVEKIFKLV 344
>gi|443315655|ref|ZP_21045135.1| ribosome-associated GTPase EngA [Leptolyngbya sp. PCC 6406]
gi|442784749|gb|ELR94609.1| ribosome-associated GTPase EngA [Leptolyngbya sp. PCC 6406]
Length = 453
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/197 (46%), Positives = 115/197 (58%), Gaps = 32/197 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA++GRPNVGKS L NRL G AIV D+PGVTRDR Y +FW + EFM+VDTGG+
Sbjct: 3 LPVVAVIGRPNVGKSTLVNRLAGARDAIVHDQPGVTRDRTYQPAFWRDREFMVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I +D E +P I QA A+ E+ I +V+G
Sbjct: 62 --------IFDD-------DTEFLP-------------HIREQALIALAEASAAILVVNG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G T AD EIA WLR++ + +LAVNKCESP +G++Q ++FW LG P P+S I G
Sbjct: 94 QDGPTEADREIAQWLRQHTVPA--VLAVNKCESPDQGLIQAAQFWELGLGEPHPVSGIHG 151
Query: 342 TGTGELLDLVCSELKKV 358
GTGELLD + L V
Sbjct: 152 NGTGELLDQLVEYLVPV 168
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 94/196 (47%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VAIVGRPNVGKS+L N VG +RAIV G TRD + + + LVDT G+
Sbjct: 178 KVAIVGRPNVGKSSLLNAFVGESRAIVSPISGTTRDAIDMVVKRKDQHYRLVDTAGI--- 234
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + N+ G E + +A AI + V++ ++D
Sbjct: 235 -RKKKNV--------NYGPEFFGI---------------NRAFKAIRRADVVLLVIDAVD 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF--------WSLGFSP-LP 335
G+T D+++A + + + IL VNK ++ K + E+ + + ++P +
Sbjct: 271 GITEQDQKLAGRVEDD--GRACILVVNKWDAVEKDAHTIYEYDRTLTGKLYFMEWAPHIY 328
Query: 336 ISAISGTGTGELLDLV 351
+SA++G ++LDLV
Sbjct: 329 VSAMTGQRVPKILDLV 344
>gi|113954294|ref|YP_729814.1| GTP-binding protein EngA [Synechococcus sp. CC9311]
gi|123031842|sp|Q0ICK8.1|DER_SYNS3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|113881645|gb|ABI46603.1| GTP-binding protein EngA [Synechococcus sp. CC9311]
Length = 455
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 92/195 (47%), Positives = 111/195 (56%), Gaps = 36/195 (18%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAI+GRPNVGKS L NRL AIV D+PGVTRDR Y +WG+ EF +VDTGG++
Sbjct: 4 PVVAIIGRPNVGKSTLVNRLCRSREAIVHDQPGVTRDRTYQDGYWGDREFKVVDTGGLVF 63
Query: 224 VSKSQ--PNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
S+ P I E QA+ A+ E+ V + +VD
Sbjct: 64 DDDSEFLPEIRE-------------------------------QASLALAEASVALVIVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
GQ GLTAADE IA+WLR +LAVNKCESP +G+ +EFW LG P PISAI
Sbjct: 93 GQQGLTAADESIAEWLRTQNCK--TLLAVNKCESPEQGLGMAAEFWRLGLGEPHPISAIH 150
Query: 341 GTGTGELLDLVCSEL 355
G GT ELLD V + L
Sbjct: 151 GAGTAELLDQVLTFL 165
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 69/155 (44%), Gaps = 31/155 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+++I+GRPNVGKS+L N + G RAIV G TRD + R + L+DT G+
Sbjct: 179 QLSIIGRPNVGKSSLLNSICGETRAIVSPIRGTTRDTIDTRIERENRRWRLIDTAGI--- 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIE-RQATAAIEESCVIIFLVDGQ 283
R +V P ++ AIE S V + ++D
Sbjct: 236 -------------------------RRRRSVNYGPEFFGINRSFKAIERSDVCVLVIDAL 270
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+T D+ +A + ++ + ++ VNK ++ K
Sbjct: 271 DGVTEQDQRLAGRIEED--GRACVVVVNKWDAVEK 303
>gi|123965688|ref|YP_001010769.1| GTP-binding protein EngA [Prochlorococcus marinus str. MIT 9515]
gi|166225838|sp|A2BV51.1|DER_PROM5 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|123200054|gb|ABM71662.1| GTP-binding protein (HSR1-related) [Prochlorococcus marinus str.
MIT 9515]
Length = 458
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 93/196 (47%), Positives = 113/196 (57%), Gaps = 32/196 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AI+GRPNVGKS L NRL N AIV D+PGVTRDR Y + WG EF +VDTGG+
Sbjct: 3 LPSIAIIGRPNVGKSTLVNRLCQSNDAIVFDKPGVTRDRTYQNASWGGKEFQVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ ED + E +P I Q A+EE+ + +F+VDG
Sbjct: 62 --------VFEDDS-------EFLP-------------EIRTQVFLALEEASIALFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
G+T D IA WLR + D I+AVNKCES GI SEFW LG P P+SAI G
Sbjct: 94 NQGVTTGDLSIAKWLRNS--DCKTIVAVNKCESLSLGISMASEFWKLGLGEPYPVSAIHG 151
Query: 342 TGTGELLDLVCSELKK 357
+GTG+LLDLV EL K
Sbjct: 152 SGTGDLLDLVIDELPK 167
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 83/185 (44%), Gaps = 38/185 (20%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
++I+GRPNVGKS+L N + G RAIV D G T D + H + +VDT G+
Sbjct: 180 MSIIGRPNVGKSSLLNAICGEKRAIVSDISGTTTDSIDTLIKKNSHLWKIVDTAGI---- 235
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+ + N + T + R A +I+ S V + ++D G
Sbjct: 236 RRKKN---------------VKYGTEFFGINR--------AFKSIDRSDVCVLVIDAIDG 272
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQV-----SEFWSLGFSPLP-I 336
+T D+++A R + ++ VNK E I QV S+ + L +S + I
Sbjct: 273 VTDQDQKLAG--RIEEQGRACVIVVNKWDLVEKNNSTIYQVEKELRSKLYFLHWSKMIFI 330
Query: 337 SAISG 341
SA++G
Sbjct: 331 SALTG 335
>gi|352096373|ref|ZP_08957253.1| GTP-binding protein engA [Synechococcus sp. WH 8016]
gi|351677067|gb|EHA60218.1| GTP-binding protein engA [Synechococcus sp. WH 8016]
Length = 455
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 92/195 (47%), Positives = 110/195 (56%), Gaps = 36/195 (18%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAI+GRPNVGKS L NRL AIV D+PGVTRDR Y +WG+ EF +VDTGG++
Sbjct: 4 PVVAIIGRPNVGKSTLVNRLCRSREAIVHDQPGVTRDRTYQDGYWGDREFKVVDTGGLVF 63
Query: 224 VSKSQ--PNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
S+ P I E QA A+ E+ V + +VD
Sbjct: 64 DDDSEFLPEIRE-------------------------------QAGLALAEASVALVIVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
GQ GLTAADE IA+WLR +LAVNKCESP +G+ +EFW LG P PISAI
Sbjct: 93 GQQGLTAADESIAEWLRTQQCK--TLLAVNKCESPEQGLAMAAEFWRLGLGEPHPISAIH 150
Query: 341 GTGTGELLDLVCSEL 355
G GT ELLD V + L
Sbjct: 151 GAGTAELLDQVLTFL 165
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 69/155 (44%), Gaps = 31/155 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+++I+GRPNVGKS+L N + G RAIV G TRD + R + L+DT G+
Sbjct: 179 QLSIIGRPNVGKSSLLNAICGETRAIVSPIRGTTRDTIDTRIERENRPWRLIDTAGI--- 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIE-RQATAAIEESCVIIFLVDGQ 283
R +V P ++ AIE S V + ++D
Sbjct: 236 -------------------------RRRRSVNYGPEFFGINRSFKAIERSDVCVLVIDAL 270
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+T D+ +A + ++ + ++ VNK ++ K
Sbjct: 271 DGVTEQDQRLAGRIEED--GRACVVVVNKWDAVEK 303
>gi|33865191|ref|NP_896750.1| GTP-binding protein EngA [Synechococcus sp. WH 8102]
gi|41017009|sp|Q7U8G2.1|DER_SYNPX RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|33638875|emb|CAE07172.1| putative GTP-binding protein [Synechococcus sp. WH 8102]
Length = 455
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 93/195 (47%), Positives = 113/195 (57%), Gaps = 36/195 (18%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAI+GRPNVGKS L NRL AIV DEPGVTRDR Y +WG+ EF +VDTGG++
Sbjct: 4 PVVAIIGRPNVGKSTLVNRLCRSREAIVHDEPGVTRDRTYQDGYWGDREFKVVDTGGLVF 63
Query: 224 VSKSQ--PNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
S+ P I E QA A+EE+ V + +VD
Sbjct: 64 DDDSEFLPEIRE-------------------------------QAALAMEEASVAVVIVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
GQ G+TAADE IA++LR +LAVNKCESP +G+ +EFWSLG P PISAI
Sbjct: 93 GQQGITAADESIAEFLRSRPCP--TLLAVNKCESPEQGLAMAAEFWSLGLGEPHPISAIH 150
Query: 341 GTGTGELLDLVCSEL 355
G GTG+LLD V + L
Sbjct: 151 GVGTGDLLDQVLTFL 165
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 68/155 (43%), Gaps = 31/155 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS+L N + G RAIV G TRD + + LVDT G+
Sbjct: 179 QMAIIGRPNVGKSSLLNAICGEQRAIVSPIRGTTRDTIDTNIVRENRPWRLVDTAGI--- 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIE-RQATAAIEESCVIIFLVDGQ 283
R +V P ++ AI+ S V + ++D
Sbjct: 236 -------------------------RRRRSVNYGPEYFGINRSFKAIDRSDVCVLVIDAL 270
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+T D+ +A + ++ + ++ VNK ++ K
Sbjct: 271 DGVTEQDQRLAGRIEED--GRACVVVVNKWDAVEK 303
>gi|427704197|ref|YP_007047419.1| ribosome-associated GTPase EngA [Cyanobium gracile PCC 6307]
gi|427347365|gb|AFY30078.1| ribosome-associated GTPase EngA [Cyanobium gracile PCC 6307]
Length = 454
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 90/196 (45%), Positives = 113/196 (57%), Gaps = 36/196 (18%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA++GRPNVGKS L NRL AIV D+PGVTRDR Y FWG+ F +VDTGG++
Sbjct: 3 LPVVAVIGRPNVGKSTLVNRLCRSREAIVHDQPGVTRDRTYQEGFWGDRTFRVVDTGGLV 62
Query: 223 NVSKSQ--PNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLV 280
S+ P I E QA A+ E+ V + +V
Sbjct: 63 FDDDSEFLPEIRE-------------------------------QANLALAEASVAVVIV 91
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAI 339
DGQ G+TAADE IA+WLR + + ++L VNKCESP +G+ ++FW LG P PISAI
Sbjct: 92 DGQQGVTAADESIAEWLRGHNVP--VLLGVNKCESPDQGLAMAADFWGLGLGEPHPISAI 149
Query: 340 SGTGTGELLDLVCSEL 355
G GTG+LLD V S L
Sbjct: 150 HGAGTGDLLDRVISFL 165
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 68/154 (44%), Gaps = 29/154 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS+L N + G NRAIV G TRD + + L+DT G+
Sbjct: 178 QLAIIGRPNVGKSSLLNAICGENRAIVSPIRGTTRDTIDTTLEREGLTWKLIDTAGIRR- 236
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+S E IT + AIE S V I ++D
Sbjct: 237 RRSVDYGPEYFGITRSF--------------------------KAIERSDVCILVIDALD 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+T D+ +A + ++ + + VNK ++ K
Sbjct: 271 GVTEQDQRLAGRIEED--GRACAVVVNKWDAIEK 302
>gi|409992857|ref|ZP_11276024.1| GTP-binding protein Der [Arthrospira platensis str. Paraca]
gi|291569696|dbj|BAI91968.1| GTP-binding protein [Arthrospira platensis NIES-39]
gi|409936275|gb|EKN77772.1| GTP-binding protein Der [Arthrospira platensis str. Paraca]
Length = 453
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 88/193 (45%), Positives = 113/193 (58%), Gaps = 32/193 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAI+GRPNVGKS L NRL AIV D+PG+TRDR Y ++W + EF++VDTGG+
Sbjct: 4 PIVAIIGRPNVGKSTLVNRLTQTQDAIVHDQPGMTRDRTYRSAYWQDREFIVVDTGGL-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ +D E +PL I QA A+ E+ I +VDGQ
Sbjct: 62 -------VFDD-------DTEFVPL-------------IREQALMALAEATAAILVVDGQ 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGT 342
G T DE IA WLR+ + I+LAVNKCESP +G+ Q ++FW LG +P PIS+I G
Sbjct: 95 TGPTGGDEAIASWLRQQKVP--ILLAVNKCESPTQGLTQAAQFWELGLGTPFPISSIHGN 152
Query: 343 GTGELLDLVCSEL 355
GTGELLD + L
Sbjct: 153 GTGELLDTLIEHL 165
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 86/196 (43%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
RVAIVGRPNVGKS+L N +G RAIV G TRD + + + LVDT G+
Sbjct: 178 RVAIVGRPNVGKSSLLNTFLGQERAIVSPISGTTRDAIDTIVEHNGNTYRLVDTAGIRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ G E + +A AI + V++F++D
Sbjct: 238 KHVE------------YGAEFFGI---------------NRAFKAIRRADVVLFVIDAVE 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLP--------- 335
G+T D+++A + + + ++ VNK ++ K + E+ + S L
Sbjct: 271 GVTDQDQKLAGRIADD--GRACVIVVNKWDAVEKDSYTILEYEKVMRSRLYFLDWADMIF 328
Query: 336 ISAISGTGTGELLDLV 351
+SA++G ++ LV
Sbjct: 329 VSAMTGQRVEKIFKLV 344
>gi|376005884|ref|ZP_09783254.1| GTP-binding protein EngA [Arthrospira sp. PCC 8005]
gi|375325736|emb|CCE19007.1| GTP-binding protein EngA [Arthrospira sp. PCC 8005]
Length = 453
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 88/193 (45%), Positives = 113/193 (58%), Gaps = 32/193 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAI+GRPNVGKS L NRL AIV D+PG+TRDR Y ++W + EF +VDTGG+
Sbjct: 4 PIVAIIGRPNVGKSTLVNRLTQTQDAIVHDQPGMTRDRTYRSAYWQDREFTVVDTGGL-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ +D E +PL I QA A+ E+ I +VDGQ
Sbjct: 62 -------VFDD-------DTEFLPL-------------IREQALMALAEATAAILVVDGQ 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGT 342
G T DE IA WLR+ + I+LAVNKCESP +G+ Q ++FW LG +P PIS+I G+
Sbjct: 95 TGPTGGDEAIASWLRQQKVP--ILLAVNKCESPTQGLTQAAQFWELGLGNPFPISSIHGS 152
Query: 343 GTGELLDLVCSEL 355
GTGELLD + L
Sbjct: 153 GTGELLDALIENL 165
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 86/196 (43%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
RVAIVGRPNVGKS+L N +G RAIV G TRD + + + LVDT G+
Sbjct: 178 RVAIVGRPNVGKSSLLNTFLGQERAIVSPISGTTRDAIDTIVEHNGNTYRLVDTAGIRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ G E + +A AI + V++F++D
Sbjct: 238 KHVE------------YGAEFFGI---------------NRAFKAIRRADVVLFVIDAVE 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLP--------- 335
G+T D+++A + + + ++ VNK ++ K + E+ + S L
Sbjct: 271 GVTDQDQKLAGRISDD--GRACVIVVNKWDAVEKDSYTILEYEKVMRSRLYFLDWADMIF 328
Query: 336 ISAISGTGTGELLDLV 351
+SA++G ++ LV
Sbjct: 329 VSAMTGQRVEKIFKLV 344
>gi|209527936|ref|ZP_03276422.1| small GTP-binding protein [Arthrospira maxima CS-328]
gi|209491626|gb|EDZ91995.1| small GTP-binding protein [Arthrospira maxima CS-328]
Length = 453
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/193 (45%), Positives = 113/193 (58%), Gaps = 32/193 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAI+GRPNVGKS L NRL AIV D+PG+TRDR Y ++W + EF +VDTGG+
Sbjct: 4 PIVAIIGRPNVGKSTLVNRLTQTQDAIVHDQPGMTRDRTYRSAYWQDREFTVVDTGGL-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ +D E +PL I QA A+ E+ I +VDGQ
Sbjct: 62 -------VFDD-------DTEFLPL-------------IREQALMALAEATAAILVVDGQ 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGT 342
G T DE IA WLR+ + I+LAVNKCESP +G+ Q ++FW LG +P PIS+I G+
Sbjct: 95 TGPTGGDEAIASWLRQQKVP--ILLAVNKCESPTQGLTQAAQFWELGLGNPFPISSIHGS 152
Query: 343 GTGELLDLVCSEL 355
GTGELLD + L
Sbjct: 153 GTGELLDALIENL 165
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 86/196 (43%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
RVAIVGRPNVGKS+L N +G RAIV G TRD + + + LVDT G+
Sbjct: 178 RVAIVGRPNVGKSSLLNTFLGQERAIVSPISGTTRDAIDTIVEHNGNTYRLVDTAGIRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ G E + +A AI + V++F++D
Sbjct: 238 KHVE------------YGAEFFGI---------------NRAFKAIRRADVVLFVIDAVE 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLP--------- 335
G+T D+++A + + + ++ VNK ++ K + E+ + S L
Sbjct: 271 GVTDQDQKLAGRISDD--GRACVIVVNKWDAVEKDSYTILEYEKVMRSRLYFLDWADMIF 328
Query: 336 ISAISGTGTGELLDLV 351
+SA++G ++ LV
Sbjct: 329 VSAMTGQRVEKIFKLV 344
>gi|33862476|ref|NP_894036.1| GTP-binding protein EngA [Prochlorococcus marinus str. MIT 9313]
gi|41017013|sp|Q7V8X0.1|DER_PROMM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|33640589|emb|CAE20378.1| GTP-binding protein (HSR1-related):AAA ATPase superfamily
[Prochlorococcus marinus str. MIT 9313]
Length = 455
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/195 (47%), Positives = 111/195 (56%), Gaps = 36/195 (18%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL- 222
P VAI+GRPNVGKS L NRL AIV D+PGVTRDR Y FWG+ EF +VDTGG++
Sbjct: 4 PIVAIIGRPNVGKSTLVNRLCRSREAIVDDKPGVTRDRTYQDGFWGDREFKVVDTGGLVF 63
Query: 223 -NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ S+ P I E QA A+ E+ V + +VD
Sbjct: 64 DDDSEFLPEIRE-------------------------------QANLALAEASVALVIVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
GQ G+TAADE IA+WLR + AVNKCESP +G+ +EFW LG P PISAI
Sbjct: 93 GQQGVTAADESIAEWLRTQPCPTLV--AVNKCESPDQGLAMAAEFWRLGLGEPFPISAIH 150
Query: 341 GTGTGELLDLVCSEL 355
G GTG+LLD V S L
Sbjct: 151 GAGTGDLLDRVLSLL 165
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 73/167 (43%), Gaps = 37/167 (22%)
Query: 159 PEHLLP------RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHE 212
P+H P ++AI+GRPNVGKS+L N + G RAIV G TRD + R H
Sbjct: 167 PKHEEPEEDEPIQMAIIGRPNVGKSSLLNAICGEPRAIVSPIRGTTRDTIDTRLEREGHP 226
Query: 213 FMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIE-RQATAAIE 271
+ L+DT G+ R +V P ++ AIE
Sbjct: 227 WRLIDTAGI----------------------------RRRRSVNYGPEFFGINRSFKAIE 258
Query: 272 ESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
S V + ++D G+T D+ +A + + + +L VNK ++ K
Sbjct: 259 RSDVCVLVIDALDGVTEQDQRLAGRIEDD--GRACVLVVNKWDAVEK 303
>gi|33239840|ref|NP_874782.1| GTP-binding protein EngA [Prochlorococcus marinus subsp. marinus
str. CCMP1375]
gi|41017014|sp|Q7VDI8.1|DER_PROMA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|33237366|gb|AAP99434.1| Predicted GTPase [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
Length = 456
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/195 (47%), Positives = 111/195 (56%), Gaps = 36/195 (18%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAI+GRPNVGKS L NRL AIV D+PGVTRDR Y FWG+ EF LVDTGG++
Sbjct: 4 PIVAIIGRPNVGKSTLVNRLCQSREAIVHDQPGVTRDRSYQDGFWGDREFKLVDTGGLVF 63
Query: 224 VSKSQ--PNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+++ P I E QA A+ E+ + + +VD
Sbjct: 64 DDETEFLPEIRE-------------------------------QANLALSEASIALLIVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
GQ GLTAADE IA WLR + + I+LAVNKCES G+ EFW LG P P+SAI
Sbjct: 93 GQQGLTAADEVIAAWLRHSKCE--ILLAVNKCESVELGLSMAGEFWRLGLGEPYPVSAIH 150
Query: 341 GTGTGELLDLVCSEL 355
G GTGELLD + S L
Sbjct: 151 GAGTGELLDRLISIL 165
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 66/155 (42%), Gaps = 31/155 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VAIVGRPNVGKS+L N + G RAIV G TRD + + L+DT G+
Sbjct: 179 QVAIVGRPNVGKSSLLNAICGEKRAIVSAIRGTTRDTIDTSIVREGKLWKLIDTAGI--- 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIE-RQATAAIEESCVIIFLVDGQ 283
R +V P ++ AIE S V + ++D
Sbjct: 236 -------------------------RRRKSVNYGPEFFGINRSFKAIERSDVCVLVIDAL 270
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+T D+ +A R + ++ VNK ++ K
Sbjct: 271 DGVTEQDQRLAG--RIEEEGRACLVVVNKWDAVEK 303
>gi|124023844|ref|YP_001018151.1| GTP-binding protein EngA [Prochlorococcus marinus str. MIT 9303]
gi|123964130|gb|ABM78886.1| GTP-binding protein (HSR1-related) [Prochlorococcus marinus str.
MIT 9303]
Length = 461
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/195 (47%), Positives = 110/195 (56%), Gaps = 36/195 (18%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAI+GRPNVGKS L NRL AIV D+PGVTRDR Y FWG+ EF +VDTGG++
Sbjct: 10 PIVAIIGRPNVGKSTLVNRLCRSREAIVDDKPGVTRDRTYQDGFWGDREFKVVDTGGLVF 69
Query: 224 VSKSQ--PNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
S+ P I E QA A+ E+ V + +VD
Sbjct: 70 DDDSEFLPEIRE-------------------------------QANLALAEASVALVIVD 98
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
GQ G+TAADE IA+WLR + AVNKCESP +G+ +EFW LG P PISAI
Sbjct: 99 GQQGVTAADESIAEWLRMQPCPTLV--AVNKCESPDQGLAMAAEFWRLGLGEPFPISAIH 156
Query: 341 GTGTGELLDLVCSEL 355
G GTG+LLD V S L
Sbjct: 157 GAGTGDLLDRVLSLL 171
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 69/155 (44%), Gaps = 31/155 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS+L N + G RAIV G TRD + R H + L+DT G+
Sbjct: 185 QMAIIGRPNVGKSSLLNAICGEPRAIVSPIRGTTRDTIDTRLEREGHPWRLIDTAGI--- 241
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIE-RQATAAIEESCVIIFLVDGQ 283
R +V P ++ AIE S V + ++D
Sbjct: 242 -------------------------RRRRSVNYGPEFFGINRSFKAIERSDVCVLVIDAL 276
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+T D+ +A + + + +L VNK ++ K
Sbjct: 277 DGVTEQDQRLAGRIEDD--GRACVLVVNKWDAVEK 309
>gi|257439162|ref|ZP_05614917.1| ribosome-associated GTPase EngA [Faecalibacterium prausnitzii
A2-165]
gi|257198413|gb|EEU96697.1| ribosome biogenesis GTPase Der [Faecalibacterium prausnitzii
A2-165]
Length = 447
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/200 (46%), Positives = 119/200 (59%), Gaps = 32/200 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN+L G AIV D PG+TRDR++ W HEFMLVDTGG+
Sbjct: 4 PIVAVVGRPNVGKSTLFNKLCGQRLAIVEDTPGITRDRIFANCEWSGHEFMLVDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P EGI RE QA AI+ + II +VD +
Sbjct: 62 ----EPK-----------ATEGILAHMRE------------QAEIAIDTADCIIMVVDVR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP-LPISAISGT 342
GLTAADEE+A LR+++ K IILAVNKC+ + M++ EF++LGF LPIS++ G
Sbjct: 95 DGLTAADEEVAHMLRRSH--KPIILAVNKCDKTGEAPMELYEFYNLGFDEVLPISSVHGH 152
Query: 343 GTGELLDLVCSELKKVEVCI 362
GTG+LLD VC+ L E +
Sbjct: 153 GTGDLLDAVCAHLDFSETVV 172
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 96/211 (45%), Gaps = 54/211 (25%)
Query: 158 VPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRM-------YGRSFWGE 210
V E +P VAI+GRPNVGKS+L NR++G NR IV +E G TRD + YG+
Sbjct: 172 VEEDRIP-VAIIGRPNVGKSSLTNRILGENRMIVANEAGTTRDAIDTPVDNAYGK----- 225
Query: 211 HEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAI 270
F+ DT G+ + + NI + L + +A AA+
Sbjct: 226 --FIFTDTAGL----RKRSNISDGLERYMVV-----------------------RALAAV 256
Query: 271 EESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSE-- 325
E S V + LVD G T D ++A + + K I+ VNK E M+
Sbjct: 257 ERSRVALILVDATVGFTEQDSKVAGYAHEQ--GKACIIVVNKWDAVEGKETNTMEHQRRD 314
Query: 326 ----FWSLGFSPLP-ISAISGTGTGELLDLV 351
F +G++P+ ISA +G +L+ L+
Sbjct: 315 YADCFSFMGYAPIIFISAQTGYNVNKLMQLI 345
>gi|148238904|ref|YP_001224291.1| GTP-binding protein EngA [Synechococcus sp. WH 7803]
gi|166225928|sp|A5GJ79.1|DER_SYNPW RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|147847443|emb|CAK22994.1| GTP-binding protein engA [Synechococcus sp. WH 7803]
Length = 455
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/195 (46%), Positives = 112/195 (57%), Gaps = 36/195 (18%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAI+GRPNVGKS L NRL AIV DEPGVTRDR Y +WG+ +F +VDTGG++
Sbjct: 4 PVVAIIGRPNVGKSTLVNRLCHSREAIVHDEPGVTRDRTYQDGYWGDRDFKVVDTGGLVF 63
Query: 224 VSKSQ--PNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
S+ P I E QA A+EE+ V + +VD
Sbjct: 64 DDDSEFLPEIRE-------------------------------QAALALEEASVALVIVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
GQ G+TA+DE IA++LR +LAVNKCESP +G+ +EFWSLG P PISAI
Sbjct: 93 GQQGVTASDEAIAEFLRGQRCPA--LLAVNKCESPEQGLAMAAEFWSLGLGEPYPISAIH 150
Query: 341 GTGTGELLDLVCSEL 355
G GT ELLD V + L
Sbjct: 151 GAGTAELLDQVLTYL 165
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 68/155 (43%), Gaps = 31/155 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS+L N + G RAIV G TRD + + LVDT G+
Sbjct: 179 QLAIIGRPNVGKSSLLNAICGEQRAIVSPIRGTTRDTIDTSLVRENRPWRLVDTAGI--- 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIE-RQATAAIEESCVIIFLVDGQ 283
R +V P ++ AIE S V + ++D
Sbjct: 236 -------------------------RRRRSVNYGPEFFGINRSFKAIERSDVCVLVIDAL 270
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+T D+ +A + ++ + ++ VNK ++ K
Sbjct: 271 DGVTEQDQRLAGRIEED--GRACVVVVNKWDAVEK 303
>gi|428319778|ref|YP_007117660.1| GTP-binding protein engA [Oscillatoria nigro-viridis PCC 7112]
gi|428243458|gb|AFZ09244.1| GTP-binding protein engA [Oscillatoria nigro-viridis PCC 7112]
Length = 453
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 96/209 (45%), Positives = 121/209 (57%), Gaps = 40/209 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL AIV DEPG+TRDR Y ++WG+ E+ +VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLANTQDAIVHDEPGITRDRTYRPAYWGDREYQVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I QA AA+ E+ IF+VDG
Sbjct: 62 --------VFDDET-------EFLPL-------------IREQAMAALAEASAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q GLT DE IA WLR + +ILAVNKCES + G+ Q ++FW LG P PIS I G
Sbjct: 94 QTGLTGGDEAIASWLRLQKVP--VILAVNKCESEKTGLTQAADFWQLGLGEPYPISGIHG 151
Query: 342 TGTGELLDL--------VCSELKKVEVCI 362
GTGELLD V SE+++++V I
Sbjct: 152 NGTGELLDKLITYLPTEVLSEVEEIKVAI 180
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 93/196 (47%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VAI+GRPNVGKS+L N +G NRAIV G TRD + + L+DT G+
Sbjct: 177 KVAIIGRPNVGKSSLLNAFLGENRAIVSPISGTTRDAIDTLVERNGKTYRLIDTAGI--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + N+ G E + +A AI + VI+ ++D
Sbjct: 234 -RKKKNV--------EYGAEFFGI---------------NRAFKAIRRANVILLVIDAID 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF--------WSLGFSPLP- 335
G+T D+++AD R + + I+ VNK ++ K + E+ + L ++ +
Sbjct: 270 GVTDQDQKLAD--RISQEGRACIIVVNKWDAVEKDSDTIYEYEREVRTRLYFLDWAEMIF 327
Query: 336 ISAISGTGTGELLDLV 351
+SA+SG ++++LV
Sbjct: 328 VSAMSGQRVEKIIELV 343
>gi|434399542|ref|YP_007133546.1| GTP-binding protein engA [Stanieria cyanosphaera PCC 7437]
gi|428270639|gb|AFZ36580.1| GTP-binding protein engA [Stanieria cyanosphaera PCC 7437]
Length = 453
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/198 (46%), Positives = 121/198 (61%), Gaps = 32/198 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS NRL G +AIV DEPG+TRDR Y +FW + +F +VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTFVNRLAGDQQAIVHDEPGITRDRTYRPAFWRDRDFQVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I +QA AA+ E+ V IF+VDG
Sbjct: 62 --------VFDD-------DTEFLPL-------------IRQQAMAALAEAAVAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G T D EIADWLR+ + +LAVNKCES +G++Q ++FW LG P PISAI G
Sbjct: 94 QTGPTEGDREIADWLRQQNVPA--LLAVNKCESVEQGLIQAAQFWELGLGEPYPISAIHG 151
Query: 342 TGTGELLDLVCSELKKVE 359
+GTG+LLD + + L V+
Sbjct: 152 SGTGDLLDELITHLPSVD 169
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 90/199 (45%), Gaps = 44/199 (22%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VAIVGRPNVGKS+L N L G RAIV G TRD + E + L+DT G+
Sbjct: 178 KVAIVGRPNVGKSSLLNALTGEQRAIVSPISGTTRDAIDTLVERDEKTYRLIDTAGI--- 234
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + N+ G E + +A AI + V++F++D
Sbjct: 235 -RRKKNV--------DYGAEFFSI---------------NRAFKAIRRADVVLFVIDVLD 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF------------WSLGFS 332
G+T D ++AD R + ++ VNK ++ K + ++ W+
Sbjct: 271 GVTEQDLKLAD--RIIEEGRAAVIVVNKWDAVEKDSNTIYQYQKMLQDRLYFMDWA---E 325
Query: 333 PLPISAISGTGTGELLDLV 351
+ ISA++G ++LDLV
Sbjct: 326 SIFISAMTGQRVEKILDLV 344
>gi|87303080|ref|ZP_01085878.1| GTP-binding protein EngA [Synechococcus sp. WH 5701]
gi|87282247|gb|EAQ74207.1| GTP-binding protein EngA [Synechococcus sp. WH 5701]
Length = 455
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 89/196 (45%), Positives = 111/196 (56%), Gaps = 36/196 (18%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL AIV D+PGVTRDR Y FWG+ F +VDTGG++
Sbjct: 3 LPVVAIIGRPNVGKSTLVNRLCRSREAIVHDQPGVTRDRTYQEGFWGDRRFRVVDTGGLV 62
Query: 223 --NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLV 280
+ S+ P I E QA A+ E+ V + +V
Sbjct: 63 FDDDSEFLPEIRE-------------------------------QANLALAEASVAVVIV 91
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAI 339
DGQ GLT AD+ IADWLR + ++LAVNKCESP +G+ ++FW LG P +SAI
Sbjct: 92 DGQQGLTGADQAIADWLRGQKVP--VLLAVNKCESPDQGLAMAADFWGLGLGEPHAVSAI 149
Query: 340 SGTGTGELLDLVCSEL 355
G GTG+LLD V L
Sbjct: 150 HGAGTGDLLDKVIGYL 165
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 31/155 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS+L N + G RAIV G TRD + + L+DT G+
Sbjct: 178 QLAIIGRPNVGKSSLLNSICGEARAIVSPIRGTTRDTIDTTIEREGKTWKLLDTAGI--- 234
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIE-RQATAAIEESCVIIFLVDGQ 283
R +V+ P ++ A+E S V + ++D
Sbjct: 235 -------------------------RRRRSVSYGPEYFGINRSFKAVERSDVCVLVIDAL 269
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+T D+ +A + ++ + ++ VNK ++ K
Sbjct: 270 DGVTEQDQRVAGRIEED--GRACVIVVNKWDAIEK 302
>gi|88809283|ref|ZP_01124792.1| GTP-binding protein EngA [Synechococcus sp. WH 7805]
gi|88787225|gb|EAR18383.1| GTP-binding protein EngA [Synechococcus sp. WH 7805]
Length = 455
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 91/195 (46%), Positives = 111/195 (56%), Gaps = 36/195 (18%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAI+GRPNVGKS L NRL AIV DEPGVTRDR Y +W + EF +VDTGG++
Sbjct: 4 PVVAIIGRPNVGKSTLVNRLCHSREAIVHDEPGVTRDRTYQDGYWSDREFKVVDTGGLVF 63
Query: 224 VSKSQ--PNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
S+ P I E QA A+EE+ V + +VD
Sbjct: 64 DDDSEFLPEIRE-------------------------------QAALALEEASVALVIVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
GQ G+TA+DE IA++LR +LAVNKCESP +G+ +EFWSLG P PISAI
Sbjct: 93 GQQGVTASDEAIAEFLRGQRCPA--LLAVNKCESPEQGLAMAAEFWSLGLGEPYPISAIH 150
Query: 341 GTGTGELLDLVCSEL 355
G GT ELLD V + L
Sbjct: 151 GAGTAELLDQVLTYL 165
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 31/155 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS+L N + G RAIV G TRD + + LVDT G+
Sbjct: 179 QLAIIGRPNVGKSSLLNAICGEQRAIVSPIRGTTRDTIDTSLVRENRPWRLVDTAGI--- 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIE-RQATAAIEESCVIIFLVDGQ 283
R +V+ P ++ AIE S V + ++D
Sbjct: 236 -------------------------RRRRSVSYGPEFFGINRSFKAIERSDVCVLVIDAL 270
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+T D+ +A + ++ + ++ VNK ++ K
Sbjct: 271 DGVTEQDQRLAGRIEED--GRACVVVVNKWDAVEK 303
>gi|300869581|ref|ZP_07114162.1| GTP-binding protein engA [Oscillatoria sp. PCC 6506]
gi|300332449|emb|CBN59362.1| GTP-binding protein engA [Oscillatoria sp. PCC 6506]
Length = 454
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 116/197 (58%), Gaps = 32/197 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS + NR +IV D+PG+TRDR Y ++WG+ EF +VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTIVNRFAESQDSIVHDQPGMTRDRTYKNAYWGDREFQVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I QA AA+ E+ IF+VDG
Sbjct: 62 --------VFDD-------NTEFLPL-------------IREQAMAALAEASAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q GLT DE IA+WLR+ + ++LAVNKCES +G+ Q ++FW LG P PIS I G
Sbjct: 94 QIGLTGGDEAIAEWLRQQRVP--VLLAVNKCESETEGLTQAAQFWELGLGEPFPISGIHG 151
Query: 342 TGTGELLDLVCSELKKV 358
GTGELLD + S L V
Sbjct: 152 NGTGELLDELISHLPAV 168
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 29/172 (16%)
Query: 155 IGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFM 214
+G +PE +VAIVGRPNVGKS+L N +G RAIV G TRD + +
Sbjct: 168 VGELPEIEETKVAIVGRPNVGKSSLLNAFLGETRAIVSPISGTTRDAIDTVVERNGTTYR 227
Query: 215 LVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESC 274
L+DT G+ + + N+ G E + +A AI +
Sbjct: 228 LIDTAGI----RKKKNV--------EYGPEFFGI---------------NRAFKAIRRAD 260
Query: 275 VIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
V++ ++D G+T D+++AD R + + ++ VNK ++ K + ++
Sbjct: 261 VVLLVIDAVDGVTDQDQKLAD--RISEEGRACVIVVNKWDAIEKDSTTIYDY 310
>gi|295100402|emb|CBK97947.1| ribosome-associated GTPase EngA [Faecalibacterium prausnitzii L2-6]
Length = 447
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 90/200 (45%), Positives = 120/200 (60%), Gaps = 32/200 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN+L G AIV D PG+TRDR++ W HEF+LVDTGG+
Sbjct: 4 PIVAVVGRPNVGKSTLFNKLCGQRLAIVEDTPGITRDRIFANCEWSGHEFLLVDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P EGI RE QA AI+ + II +VD +
Sbjct: 62 ----EPK-----------ATEGILAHMRE------------QAQIAIDTADCIIMVVDVR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP-LPISAISGT 342
GLTAADE++A LR+++ K IILAVNKC++ + M++ EF++LGF +PIS++ G
Sbjct: 95 NGLTAADEDVAHMLRRSH--KPIILAVNKCDNVGETPMELYEFYNLGFDEVMPISSVHGH 152
Query: 343 GTGELLDLVCSELKKVEVCI 362
GTG+LLD VC+ L E +
Sbjct: 153 GTGDLLDAVCAHLDFSETVV 172
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 97/213 (45%), Gaps = 58/213 (27%)
Query: 158 VPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRM-------YGRSFWGE 210
V E +P VAI+GRPNVGKS+L NR++G NR IV +E G TRD + YG+
Sbjct: 172 VEEDRIP-VAIIGRPNVGKSSLTNRILGENRMIVANEAGTTRDAIDTPVDNAYGK----- 225
Query: 211 HEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAI 270
F+ DT G+ + + NI + L + +A AA+
Sbjct: 226 --FIFTDTAGL----RKRSNITDGLERYMVV-----------------------RALAAV 256
Query: 271 EESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNK-----------CESPRKG 319
E S V + LVD G T D ++A + K I+ VNK E R+G
Sbjct: 257 ERSRVALILVDATVGFTEQDSKVAGYAHDQ--GKACIIVVNKWDAVEGKETNTMELQRRG 314
Query: 320 IMQVSEFWSLGFSPLP-ISAISGTGTGELLDLV 351
+ F +G++P+ ISA +G +L+ L+
Sbjct: 315 YAECFSF--MGYAPIIFISAQTGYNVNKLMQLI 345
>gi|332711902|ref|ZP_08431832.1| ribosome-associated GTPase EngA [Moorea producens 3L]
gi|332349230|gb|EGJ28840.1| ribosome-associated GTPase EngA [Moorea producens 3L]
Length = 463
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 89/198 (44%), Positives = 119/198 (60%), Gaps = 32/198 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA++GRPNVGKS L NRL G AIV ++PGVTRDR Y +FW + ++++VDTGG+
Sbjct: 3 LPIVAVIGRPNVGKSTLVNRLAGVTDAIVHNQPGVTRDRTYRAAFWQDRDYLVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I QA AA+ E+ + +VDG
Sbjct: 62 --------VFDD-------NTEFLPL-------------IREQAMAALAEASAAVLVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
QAG TA DE IA WLR + ++LAVNKCESP++GI+ S+FW L P P+SAI G
Sbjct: 94 QAGPTAGDEAIAQWLR--IQNTPVVLAVNKCESPQQGIILASQFWELNLGEPFPVSAIHG 151
Query: 342 TGTGELLDLVCSELKKVE 359
GTGELL+ + + L V+
Sbjct: 152 NGTGELLEKLVTYLPNVD 169
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 97/214 (45%), Gaps = 46/214 (21%)
Query: 155 IGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRM---YGRSFWGE- 210
+ N+PE +VAIVGRPNVGKS+L N L G NR+IV G TRD + RS E
Sbjct: 168 VDNIPEIPEIKVAIVGRPNVGKSSLLNTLTGENRSIVSPISGTTRDAIDMVVQRSADPEK 227
Query: 211 ----HEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQA 266
+ L+DT G+ + + N+ T G E + +A
Sbjct: 228 GTEAQTYRLIDTAGI----RKKKNV--------TYGPEFFGI---------------NRA 260
Query: 267 TAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
AI S V++ ++D G+T D+++A R + ++ VNK ++ K + ++
Sbjct: 261 FKAIRRSDVVLLVIDAIDGVTEQDQKLAG--RIADEGRAAVIVVNKWDAIEKDSYTIYDY 318
Query: 327 WS-----LGF----SPLPISAISGTGTGELLDLV 351
L F + +SA++G +LDLV
Sbjct: 319 QKQVKDRLSFIEWAEIIFVSAMTGKRVETILDLV 352
>gi|78778772|ref|YP_396884.1| GTP-binding protein EngA [Prochlorococcus marinus str. MIT 9312]
gi|123554591|sp|Q31CE7.1|DER_PROM9 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|78712271|gb|ABB49448.1| Small GTP-binding protein domain [Prochlorococcus marinus str. MIT
9312]
Length = 457
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 89/195 (45%), Positives = 111/195 (56%), Gaps = 32/195 (16%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP +AI+GRPNVGKS L NRL N AIV D+PGVTRDR Y + WG EF +VDTGG+
Sbjct: 2 ILPTIAIIGRPNVGKSTLVNRLCQSNDAIVFDKPGVTRDRTYQNASWGGKEFQIVDTGGL 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ +D + E +P I Q A+EE+ + + +VD
Sbjct: 62 ---------VFDDDS-------EFLP-------------EIRAQVFLALEEASLALLVVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G G+T D IA WLR + I+AVNKCES GI SEFW LG P P+SAI
Sbjct: 93 GNQGVTDGDLSIAKWLRNSSCK--TIIAVNKCESTTLGISLASEFWKLGLGEPYPVSAIH 150
Query: 341 GTGTGELLDLVCSEL 355
G+GTG+LLDLV EL
Sbjct: 151 GSGTGDLLDLVIGEL 165
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 44/202 (21%)
Query: 155 IGNVPEHLLPR------VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFW 208
IG +PE+ + ++I+GRPNVGKS+L N + G RAIV D G T D +
Sbjct: 162 IGELPENNIQEEEEKIMMSIIGRPNVGKSSLLNSISGEKRAIVSDISGTTTDSIDTLIKK 221
Query: 209 GEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATA 268
G+ ++ +VDT G+ + + N + T + R A
Sbjct: 222 GDTQWKIVDTAGI----RRKKN---------------VKYGTEFFGINR--------AFK 254
Query: 269 AIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKG---IMQV-- 323
+I+ S V + ++D G+T D+++A R + I+ +NK + K I QV
Sbjct: 255 SIDRSDVCVLVIDAIDGVTDQDQKLAG--RIEEQGRACIIVINKWDLVEKNSSTIYQVEK 312
Query: 324 ---SEFWSLGFSPLP-ISAISG 341
S+ + L +S + ISA++G
Sbjct: 313 ELRSKLYFLHWSKMIFISALTG 334
>gi|334119804|ref|ZP_08493888.1| GTP-binding protein engA [Microcoleus vaginatus FGP-2]
gi|333457445|gb|EGK86068.1| GTP-binding protein engA [Microcoleus vaginatus FGP-2]
Length = 453
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 90/194 (46%), Positives = 113/194 (58%), Gaps = 32/194 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS + NRL AIV DEPG+TRDR Y ++WG+ E+ +VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTIVNRLANTQDAIVHDEPGITRDRTYRPAYWGDREYQVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I QA AA+ E+ IF+VDG
Sbjct: 62 --------VFDDET-------EFLPL-------------IREQAMAALAEASAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q GLT DE IA WLR + +ILAVNKCES G+ Q ++FW LG P P+S I G
Sbjct: 94 QTGLTGGDESIASWLRLQKVP--VILAVNKCESENTGLTQAADFWQLGLGEPYPVSGIHG 151
Query: 342 TGTGELLDLVCSEL 355
GTGELLD + + L
Sbjct: 152 NGTGELLDKLITYL 165
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 43/211 (20%)
Query: 155 IGNVPEHLLP-----RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWG 209
I +P +LP +VAI+GRPNVGKS+L N +G NRAIV G TRD +
Sbjct: 162 ITYLPTEVLPEVEEIKVAIIGRPNVGKSSLLNAFLGENRAIVSPISGTTRDAIDTLVERN 221
Query: 210 EHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAA 269
+ L+DT G+ + + N+ G E + +A A
Sbjct: 222 GKTYRLIDTAGI----RKKKNV--------EYGAEFFGI---------------NRAFKA 254
Query: 270 IEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF--- 326
I + VI+ ++D G+T D+++AD R + + I+ VNK ++ K + E+
Sbjct: 255 IRRADVILLVIDAIDGVTDQDQKLAD--RISEEGRACIIVVNKWDAVEKDSDTIYEYERE 312
Query: 327 -----WSLGFSPLP-ISAISGTGTGELLDLV 351
+ L ++ + +SA+SG ++++LV
Sbjct: 313 VRTRLYFLDWAEMIFVSAMSGQRVEKIIELV 343
>gi|91069816|gb|ABE10748.1| GTP-binding protein [uncultured Prochlorococcus marinus clone
ASNC1092]
Length = 457
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 89/195 (45%), Positives = 111/195 (56%), Gaps = 32/195 (16%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP +AI+GRPNVGKS L NRL N AIV D+PGVTRDR Y + WG EF +VDTGG+
Sbjct: 2 ILPTIAIIGRPNVGKSTLVNRLCQSNDAIVFDKPGVTRDRTYQNASWGGKEFQIVDTGGL 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ +D + E +P I Q A+EE+ + + +VD
Sbjct: 62 ---------VFDDDS-------EFLP-------------QIRTQVFLALEEASLALLVVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G G+T D IA WLR + I+AVNKCES GI SEFW LG P P+SAI
Sbjct: 93 GNQGVTDGDLSIAKWLRNSSCK--TIVAVNKCESTTLGISLASEFWKLGLGEPNPVSAIH 150
Query: 341 GTGTGELLDLVCSEL 355
G+GTG+LLDLV EL
Sbjct: 151 GSGTGDLLDLVIGEL 165
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 44/202 (21%)
Query: 155 IGNVPEHLLP------RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFW 208
IG +PE+ + ++I+GRPNVGKS+L N + G RAIV D G T D +
Sbjct: 162 IGELPENNIQDDEEKIMMSIIGRPNVGKSSLLNSICGEKRAIVSDISGTTTDSIDTLIKK 221
Query: 209 GEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATA 268
G++ + ++DT G+ + + N + T + R A
Sbjct: 222 GDNHWKIIDTAGI----RRKKN---------------VKYGTEFFGINR--------AFK 254
Query: 269 AIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKG---IMQV-- 323
+I+ S V + ++D G+T D+++A R + I+ VNK + K I QV
Sbjct: 255 SIDRSDVCVLVIDAIDGVTDQDQKLAG--RIEEQGRACIIVVNKWDLVEKNSSTIYQVEK 312
Query: 324 ---SEFWSLGFSPLP-ISAISG 341
S+ + L +S + ISA++G
Sbjct: 313 ELRSKLYFLHWSKMIFISALTG 334
>gi|78184221|ref|YP_376656.1| GTP-binding protein EngA [Synechococcus sp. CC9902]
gi|123581907|sp|Q3AZ65.1|DER_SYNS9 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|78168515|gb|ABB25612.1| Small GTP-binding protein domain [Synechococcus sp. CC9902]
Length = 455
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 89/195 (45%), Positives = 112/195 (57%), Gaps = 36/195 (18%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAI+GRPNVGKS L NRL AIV D+PGVTRDR Y +WG+ EF +VDTGG++
Sbjct: 4 PVVAIIGRPNVGKSTLVNRLCRSREAIVHDQPGVTRDRTYQDGYWGDREFKVVDTGGLVF 63
Query: 224 VSKSQ--PNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
S+ P I E QA A++E+ V + +VD
Sbjct: 64 DDDSEFLPEIRE-------------------------------QAALALDEASVALVIVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ GLTAADE IA++LR+ +LAVNKCES +G+ +EFWSLG P PISAI
Sbjct: 93 GKQGLTAADESIAEFLRQQRCP--TLLAVNKCESVEQGLAMAAEFWSLGLGEPYPISAIH 150
Query: 341 GTGTGELLDLVCSEL 355
G GT E+LD V + L
Sbjct: 151 GAGTAEVLDQVLTFL 165
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 68/155 (43%), Gaps = 31/155 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+++I+GRPNVGKS+L N + G RAIV G TRD + + LVDT G+
Sbjct: 179 QMSIIGRPNVGKSSLLNAICGEQRAIVSPIRGTTRDTIDTNIVRENRPWRLVDTAGI--- 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIE-RQATAAIEESCVIIFLVDGQ 283
R +V P ++ AIE S V + ++D
Sbjct: 236 -------------------------RRRRSVNYGPEYFGINRSFKAIERSDVCVLVIDAL 270
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+T D+ +A + ++ + ++ VNK ++ K
Sbjct: 271 DGVTEQDQRLAGRIEED--GRACVVVVNKWDAVEK 303
>gi|116071134|ref|ZP_01468403.1| GTP-binding protein EngA [Synechococcus sp. BL107]
gi|116066539|gb|EAU72296.1| GTP-binding protein EngA [Synechococcus sp. BL107]
Length = 455
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 89/195 (45%), Positives = 112/195 (57%), Gaps = 36/195 (18%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAI+GRPNVGKS L NRL AIV D+PGVTRDR Y +WG+ EF +VDTGG++
Sbjct: 4 PVVAIIGRPNVGKSTLVNRLCRSREAIVHDQPGVTRDRTYQDGYWGDREFKVVDTGGLVF 63
Query: 224 VSKSQ--PNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
S+ P I E QA A++E+ V + +VD
Sbjct: 64 DDDSEFLPEIRE-------------------------------QAALALDEASVALVIVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ GLTAADE IA++LR+ +LAVNKCES +G+ +EFWSLG P PISAI
Sbjct: 93 GKQGLTAADESIAEFLRQQRCP--TLLAVNKCESVEQGLAMAAEFWSLGLGEPYPISAIH 150
Query: 341 GTGTGELLDLVCSEL 355
G GT E+LD V + L
Sbjct: 151 GAGTAEVLDKVLTFL 165
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 68/155 (43%), Gaps = 31/155 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+++I+GRPNVGKS+L N + G RAIV G TRD + + LVDT G+
Sbjct: 179 QMSIIGRPNVGKSSLLNAICGEQRAIVSPIRGTTRDTIDTNIVRENRPWRLVDTAGI--- 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIE-RQATAAIEESCVIIFLVDGQ 283
R +V P ++ AIE S V + ++D
Sbjct: 236 -------------------------RRRRSVNYGPEYFGINRSFKAIERSDVCVLVIDAL 270
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+T D+ +A + ++ + ++ VNK ++ K
Sbjct: 271 DGVTEQDQRLAGRIEED--GRACVVVVNKWDAVEK 303
>gi|160942963|ref|ZP_02090201.1| hypothetical protein FAEPRAM212_00440 [Faecalibacterium prausnitzii
M21/2]
gi|158445657|gb|EDP22660.1| ribosome biogenesis GTPase Der [Faecalibacterium prausnitzii M21/2]
gi|295103496|emb|CBL01040.1| ribosome-associated GTPase EngA [Faecalibacterium prausnitzii
SL3/3]
Length = 447
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 89/200 (44%), Positives = 118/200 (59%), Gaps = 32/200 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN+L G AIV D PG+TRDR++ W HEF+LVDTGG+
Sbjct: 4 PIVAVVGRPNVGKSTLFNKLCGQRLAIVEDTPGITRDRIFANCEWNGHEFLLVDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P EGI RE QA AI+ + II + D +
Sbjct: 62 ----EPK-----------ATEGILAHMRE------------QAQIAIDTADCIIMVTDVR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP-LPISAISGT 342
GLTAADE++A LR+++ K IILAVNKC+ + M++ EF++LGF +PIS++ G
Sbjct: 95 NGLTAADEDVAHMLRRSH--KPIILAVNKCDKVGEAPMELYEFYNLGFDEVMPISSVHGH 152
Query: 343 GTGELLDLVCSELKKVEVCI 362
GTG+LLD VC+ L E +
Sbjct: 153 GTGDLLDAVCAHLDFSETVV 172
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 98/213 (46%), Gaps = 58/213 (27%)
Query: 158 VPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRM-------YGRSFWGE 210
V E +P VAI+GRPNVGKS+L NR++G NR IV +E G TRD + YG+
Sbjct: 172 VEEDRIP-VAIIGRPNVGKSSLTNRILGENRMIVANEAGTTRDAIDTPVDNAYGK----- 225
Query: 211 HEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAI 270
F+ DT G+ + + NI + L + +A AA+
Sbjct: 226 --FIFTDTAGL----RKRSNISDGLERYMVV-----------------------RALAAV 256
Query: 271 EESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNK-----------CESPRKG 319
E S V + LVD G T D ++A + + K I+ VNK E R+G
Sbjct: 257 ERSRVALILVDATVGFTEQDSKVAGYAHEQ--GKACIIVVNKWDAVEGKETNTMELQRRG 314
Query: 320 IMQVSEFWSLGFSPLP-ISAISGTGTGELLDLV 351
+ F +G++P+ ISA +G +L+ L+
Sbjct: 315 YAECFSF--MGYAPIIFISAQTGYNVNKLMQLI 345
>gi|123967979|ref|YP_001008837.1| GTP-binding protein EngA [Prochlorococcus marinus str. AS9601]
gi|166225839|sp|A2BPL9.1|DER_PROMS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|123198089|gb|ABM69730.1| GTP-binding protein (HSR1-related) [Prochlorococcus marinus str.
AS9601]
Length = 457
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 89/195 (45%), Positives = 110/195 (56%), Gaps = 32/195 (16%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP +AI+GRPNVGKS L NRL N AIV D+PGVTRDR Y + WG EF +VDTGG+
Sbjct: 2 ILPTIAIIGRPNVGKSTLVNRLCQSNDAIVFDKPGVTRDRTYQNASWGGKEFQIVDTGGL 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ +S E +P I Q A+EE+ + + +VD
Sbjct: 62 VFDDES----------------EFLP-------------EIRTQVFLALEEASLALLVVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G G+T D IA WLR + I+AVNKCES GI SEFW LG P P+SAI
Sbjct: 93 GNQGVTDGDLSIAKWLRNSSCK--TIVAVNKCESTTLGISLASEFWKLGLGEPNPVSAIH 150
Query: 341 GTGTGELLDLVCSEL 355
G+GTG+LLDLV EL
Sbjct: 151 GSGTGDLLDLVIGEL 165
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 44/202 (21%)
Query: 155 IGNVPEHLLP------RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFW 208
IG +PE+ + ++I+GRPNVGKS+L N + G RAIV D G T D +
Sbjct: 162 IGELPENNIQDDEEKIMMSIIGRPNVGKSSLLNSICGEKRAIVSDISGTTTDSIDTLIKK 221
Query: 209 GEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATA 268
G++ + ++DT G+ + + N + T + R A
Sbjct: 222 GDNNWKIIDTAGI----RRKKN---------------VKYGTEFFGINR--------AFK 254
Query: 269 AIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKG---IMQV-- 323
+I+ S V + ++D G+T D+++A R + I+ VNK + K I QV
Sbjct: 255 SIDRSDVCVLVIDAVDGVTDQDQKLAG--RIEEQGRACIIVVNKWDLIEKNSSTIYQVEK 312
Query: 324 ---SEFWSLGFSPLP-ISAISG 341
S+ + L +S + ISA++G
Sbjct: 313 ELRSKLYFLHWSKMIFISALTG 334
>gi|91070353|gb|ABE11270.1| GTP-binding protein [uncultured Prochlorococcus marinus clone
HF10-88F10]
Length = 457
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 89/195 (45%), Positives = 111/195 (56%), Gaps = 32/195 (16%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP +AI+GRPNVGKS L NRL N AIV D+PGVTRDR Y + WG EF +VDTGG+
Sbjct: 2 ILPTIAIIGRPNVGKSTLVNRLCQSNDAIVFDKPGVTRDRTYQNASWGGKEFQIVDTGGL 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ +D + E +P I Q A+EE+ + + +VD
Sbjct: 62 ---------VFDDDS-------EFLP-------------EIRTQVFLALEEASLALLVVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G G+T D IA WLR + I+AVNKCES GI SEFW LG P P+SAI
Sbjct: 93 GNQGVTDGDLSIAKWLRNSSCK--TIVAVNKCESTNLGISLASEFWKLGLGEPNPVSAIH 150
Query: 341 GTGTGELLDLVCSEL 355
G+GTG+LLDLV EL
Sbjct: 151 GSGTGDLLDLVIGEL 165
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 44/202 (21%)
Query: 155 IGNVPEHLLP------RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFW 208
IG +PE+ + ++I+GRPNVGKS+L N + G RAIV D G T D +
Sbjct: 162 IGELPENNIQDDEEKIMMSIIGRPNVGKSSLLNSICGEKRAIVSDISGTTTDSIDTLIKK 221
Query: 209 GEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATA 268
G++ + ++DT G+ + + N + T + R A
Sbjct: 222 GDNYWKIIDTAGI----RRKKN---------------VKYGTEFFGINR--------AFK 254
Query: 269 AIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKG---IMQV-- 323
+I+ S V + ++D G+T D+++A R + I+ VNK + K I QV
Sbjct: 255 SIDRSDVCVLVIDAIDGVTDQDQKLAG--RIEEQGRACIIVVNKWDIVEKNSSTIYQVEK 312
Query: 324 ---SEFWSLGFSPLP-ISAISG 341
S+ + L +S + ISA++G
Sbjct: 313 ELRSKLYFLHWSKMIFISALTG 334
>gi|163848650|ref|YP_001636694.1| GTP-binding protein EngA [Chloroflexus aurantiacus J-10-fl]
gi|222526586|ref|YP_002571057.1| GTP-binding protein EngA [Chloroflexus sp. Y-400-fl]
gi|189037140|sp|A9WHH9.1|DER_CHLAA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|254783145|sp|B9LBT6.1|DER_CHLSY RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|163669939|gb|ABY36305.1| small GTP-binding protein [Chloroflexus aurantiacus J-10-fl]
gi|222450465|gb|ACM54731.1| small GTP-binding protein [Chloroflexus sp. Y-400-fl]
Length = 449
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 90/193 (46%), Positives = 114/193 (59%), Gaps = 27/193 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS FNRL+G RAIV D PG TRDR+YG +FW EF +VDT GVL
Sbjct: 4 PIVAIVGRPNVGKSTFFNRLIGERRAIVEDLPGTTRDRLYGDTFWNGREFTVVDTAGVL- 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
PN+ EA +AR QA AI E+ IIF+VDG+
Sbjct: 63 FGGEDPNLP-------------------EAEIARRTRA---QAEHAIAEADAIIFIVDGR 100
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLTAAD ++AD LR K ++LAVNKC+S + ++ EF++L P+P+SA G
Sbjct: 101 DGLTAADSDVADVLRTT--SKPVVLAVNKCDSQER-MLDAVEFYALNLGEPIPMSAFHGL 157
Query: 343 GTGELLDLVCSEL 355
GTG++LD + L
Sbjct: 158 GTGDVLDRLTEYL 170
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 94/207 (45%), Gaps = 40/207 (19%)
Query: 152 KTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEH 211
KT HL R+AIVGRPNVGKS+L NRL+G R++V PG TRD + +
Sbjct: 173 KTFTQEEERHL--RIAIVGRPNVGKSSLLNRLLGQERSVVSSIPGTTRDPIDTTITYHGE 230
Query: 212 EFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIE 271
L+DT G+ K + I E ++ T+ AIE
Sbjct: 231 PITLIDTAGIRRAGKIERGI-EKYSVLRTL--------------------------RAIE 263
Query: 272 ESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIM-------QVS 324
V + L+D G+TA D IA + + K +IL VNK ++ K QV
Sbjct: 264 RCDVALLLIDATEGVTAQDTHIAGMVVE--AKKGLILVVNKWDAIEKDSHTYYAFQDQVR 321
Query: 325 E-FWSLGFSPLP-ISAISGTGTGELLD 349
E F + ++P+ +SA++G LLD
Sbjct: 322 EAFKFVDYAPIVFVSALTGQRVSHLLD 348
>gi|313114942|ref|ZP_07800438.1| ribosome-associated GTPase EngA [Faecalibacterium cf. prausnitzii
KLE1255]
gi|310622735|gb|EFQ06194.1| ribosome-associated GTPase EngA [Faecalibacterium cf. prausnitzii
KLE1255]
Length = 447
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 89/200 (44%), Positives = 118/200 (59%), Gaps = 32/200 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN+L G AIV D PG+TRDR++ W H+F+LVDTGG+
Sbjct: 4 PIVAVVGRPNVGKSTLFNKLCGQRLAIVEDTPGITRDRIFANCEWNGHDFLLVDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P EGI RE QA AI+ + II +VD +
Sbjct: 62 ----EPK-----------ATEGILAHMRE------------QAQIAIDTADCIIMVVDVR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP-LPISAISGT 342
GLTAADE++A LR+++ K IILAVNKC+ M++ EF++LGF +PIS++ G
Sbjct: 95 DGLTAADEDVAHMLRRSH--KPIILAVNKCDKVGDAPMEMYEFYNLGFDEVMPISSVHGH 152
Query: 343 GTGELLDLVCSELKKVEVCI 362
GTG+LLD VC+ L E +
Sbjct: 153 GTGDLLDAVCAHLDFSETVV 172
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 97/204 (47%), Gaps = 40/204 (19%)
Query: 158 VPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVD 217
V E +P VAI+GRPNVGKS+L NR++G NR IV +E G TRD + +F+ D
Sbjct: 172 VEEDRIP-VAIIGRPNVGKSSLTNRILGENRMIVANEAGTTRDAIDTPVDNAYGKFIFTD 230
Query: 218 TGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVII 277
T G+ + + NI T G+E M+ R A AA+E S V +
Sbjct: 231 TAGL----RKRSNI--------TDGLE--------------RYMVVR-ALAAVERSRVAL 263
Query: 278 FLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSE------FWS 328
LVD G T D ++A + K I+ VNK E M++ F
Sbjct: 264 ILVDATVGFTEQDSKVAGYAHDQ--GKACIIVVNKWDAVEGKETNTMELQRRDYAECFSF 321
Query: 329 LGFSPLP-ISAISGTGTGELLDLV 351
+G++P+ ISA +G +L+ L+
Sbjct: 322 MGYAPIIFISAQTGYNVNKLMQLI 345
>gi|254526548|ref|ZP_05138600.1| small GTP-binding protein domain [Prochlorococcus marinus str. MIT
9202]
gi|221537972|gb|EEE40425.1| small GTP-binding protein domain [Prochlorococcus marinus str. MIT
9202]
Length = 457
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 89/195 (45%), Positives = 111/195 (56%), Gaps = 32/195 (16%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP +AI+GRPNVGKS L NRL N AIV D+PGVTRDR Y + WG EF +VDTGG+
Sbjct: 2 ILPTIAIIGRPNVGKSTLVNRLCQSNDAIVFDKPGVTRDRTYQNASWGGKEFQIVDTGGL 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ +D + E +P I Q A+EE+ + + +VD
Sbjct: 62 ---------VFDDDS-------EFLP-------------EIRTQVFLALEEASLALLVVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G G+T D IA WLR + I+AVNKCES GI SEFW LG P P+SAI
Sbjct: 93 GNQGVTDGDLSIAKWLRNSSCK--TIVAVNKCESTTLGISLASEFWKLGLGEPNPVSAIH 150
Query: 341 GTGTGELLDLVCSEL 355
G+GTG+LLDLV EL
Sbjct: 151 GSGTGDLLDLVIGEL 165
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 44/202 (21%)
Query: 155 IGNVPEHLLP------RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFW 208
IG +PE+ + ++I+GRPNVGKS+L N + G RAIV D G T D +
Sbjct: 162 IGELPENNIQDDEEKIMMSIIGRPNVGKSSLLNSICGEKRAIVSDISGTTTDSIDTLIKK 221
Query: 209 GEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATA 268
G++ + ++DT G+ + + N + T + R A
Sbjct: 222 GDNYWKIIDTAGI----RRKKN---------------VKYGTEFFGINR--------AFK 254
Query: 269 AIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKG---IMQV-- 323
+I+ S V + ++D G+T D+++A R + I+ VNK + K I QV
Sbjct: 255 SIDRSDVCVLVIDAVDGVTDQDQKLAG--RIEEQGRACIIVVNKWDLVEKNSSTIYQVEK 312
Query: 324 ---SEFWSLGFSPLP-ISAISG 341
S+ + L +S + ISA++G
Sbjct: 313 ELRSKLYFLHWSKMIFISALTG 334
>gi|126695749|ref|YP_001090635.1| GTP-binding protein EngA [Prochlorococcus marinus str. MIT 9301]
gi|166225836|sp|A3PBA9.1|DER_PROM0 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|126542792|gb|ABO17034.1| GTP-binding protein (HSR1-related) [Prochlorococcus marinus str.
MIT 9301]
Length = 457
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/195 (45%), Positives = 111/195 (56%), Gaps = 32/195 (16%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP +AI+GRPNVGKS L NRL N AIV D+PGVTRDR Y + WG EF +VDTGG+
Sbjct: 2 ILPTIAIIGRPNVGKSTLVNRLCQSNDAIVFDKPGVTRDRTYQNASWGGKEFQIVDTGGL 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ +D + E +P I Q A+EE+ + + +VD
Sbjct: 62 ---------VFDDDS-------EFLP-------------EIRTQVFLALEEASLALLVVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G G+T D IA WLR + I+AVNKCES GI SEFW LG P P+SAI
Sbjct: 93 GNQGVTDGDLSIAKWLRNSSCK--TIVAVNKCESTTLGISLASEFWKLGLGEPNPVSAIH 150
Query: 341 GTGTGELLDLVCSEL 355
G+GTG+LLDLV EL
Sbjct: 151 GSGTGDLLDLVIGEL 165
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 44/202 (21%)
Query: 155 IGNVPEHLLP------RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFW 208
IG +PE+ + ++I+GRPNVGKS+L N + G RAIV D G T D +
Sbjct: 162 IGELPENNIQDDEEKIMMSIIGRPNVGKSSLLNSICGEKRAIVSDISGTTTDSIDTLIKK 221
Query: 209 GEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATA 268
G++ + ++DT G+ + + N + T + R A
Sbjct: 222 GDNHWKIIDTAGI----RRKKN---------------VKYGTEFFGINR--------AFK 254
Query: 269 AIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKG---IMQV-- 323
+I+ S V + ++D G+T D+++A R + I+ VNK + K I QV
Sbjct: 255 SIDRSDVCVLVIDAIDGVTDQDQKLAG--RIEEQGRACIIVVNKWDLVEKNSSTIYQVEK 312
Query: 324 ---SEFWSLGFSPLP-ISAISG 341
S+ + L +S + ISA++G
Sbjct: 313 ELRSKLYFLHWSKMIFISALTG 334
>gi|157412804|ref|YP_001483670.1| GTP-binding protein EngA [Prochlorococcus marinus str. MIT 9215]
gi|166920102|sp|A8G3A3.1|DER_PROM2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|157387379|gb|ABV50084.1| GTP-binding protein (HSR1-related) [Prochlorococcus marinus str.
MIT 9215]
Length = 457
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/195 (45%), Positives = 111/195 (56%), Gaps = 32/195 (16%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP +AI+GRPNVGKS L NRL N AIV D+PGVTRDR Y + WG EF +VDTGG+
Sbjct: 2 ILPTIAIIGRPNVGKSTLVNRLCQSNDAIVFDKPGVTRDRTYQNASWGGKEFQIVDTGGL 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ +D + E +P I Q A+EE+ + + +VD
Sbjct: 62 ---------VFDDDS-------EFLP-------------EIRTQVFLALEEASLALLVVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G G+T D IA WLR + I+AVNKCES GI SEFW LG P P+SAI
Sbjct: 93 GNQGVTDGDLSIAKWLRNSSCK--TIVAVNKCESTTLGISLASEFWKLGLGEPNPVSAIH 150
Query: 341 GTGTGELLDLVCSEL 355
G+GTG+LLDLV EL
Sbjct: 151 GSGTGDLLDLVIGEL 165
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 44/202 (21%)
Query: 155 IGNVPEHLLP------RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFW 208
IG +PE+ + ++I+GRPNVGKS+L N + G RAIV D G T D +
Sbjct: 162 IGELPENNIRDDEEKIMMSIIGRPNVGKSSLLNSICGEKRAIVSDISGTTTDSIDTLIKK 221
Query: 209 GEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATA 268
G++ + ++DT G+ + + N + T + R A
Sbjct: 222 GDNYWKIIDTAGI----RRKKN---------------VKYGTEFFGINR--------AFK 254
Query: 269 AIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKG---IMQV-- 323
+I+ S V + ++D G+T D+++A R + I+ VNK + K I QV
Sbjct: 255 SIDRSDVCVLVIDAVDGVTDQDQKLAG--RIEEQGRACIIVVNKWDLVEKNSSTIYQVEK 312
Query: 324 ---SEFWSLGFSPLP-ISAISG 341
S+ + L +S + ISA++G
Sbjct: 313 ELRSKLYFLHWSKMIFISALTG 334
>gi|269837313|ref|YP_003319541.1| small GTP-binding protein [Sphaerobacter thermophilus DSM 20745]
gi|269786576|gb|ACZ38719.1| small GTP-binding protein [Sphaerobacter thermophilus DSM 20745]
Length = 445
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/194 (44%), Positives = 116/194 (59%), Gaps = 29/194 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPN GKS LFNRLVG RAIV D PG TRDR+Y + WG F +VDTGG+L+
Sbjct: 4 PLVAIVGRPNTGKSTLFNRLVGERRAIVEDLPGTTRDRIYAEASWGGVTFDVVDTGGLLS 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ + A+ A + + QA AIE++ VI+F+VDGQ
Sbjct: 64 EQEIE-----------------------RASAAEIAQATQEQAELAIEQADVIVFMVDGQ 100
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS-EFWSLGFS-PLPISAISG 341
AG+TA D E+AD +R+ + ++LAVNK E+ + I + EF+ LG P PISA+ G
Sbjct: 101 AGVTAGDHEVADLIRR--AKRPVLLAVNKAEA--RNIQDAAVEFYELGLGDPYPISALHG 156
Query: 342 TGTGELLDLVCSEL 355
TG G+LLD + + L
Sbjct: 157 TGVGDLLDAIIAHL 170
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 96/208 (46%), Gaps = 54/208 (25%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
+P +AIVGRPNVGKSAL N L+G +R IV PG TRD + W + +LVDT G+
Sbjct: 181 VPSIAIVGRPNVGKSALLNALLGQSRQIVSSIPGTTRDAVDTEITWAGNRVVLVDTAGI- 239
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIER--------QATAAIEESC 274
R P IER ++T A+E +
Sbjct: 240 ----------------------------------RRPGRIERGIEKYSVLRSTRAVERAD 265
Query: 275 VIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSE-----F 326
V + ++D TA D+ IA + + K II+AVNK E + + + +E F
Sbjct: 266 VAVLVIDATEPFTAQDQAIAGAIAE--AKKGIIVAVNKWDLVEKDHRTMKEFTEKAREAF 323
Query: 327 WSLGFSPLP-ISAISGTGTGELLDLVCS 353
+ ++P+ ISA++G ++++L +
Sbjct: 324 HFISYAPIVFISALTGQRVNQVMELALA 351
>gi|33860948|ref|NP_892509.1| GTP-binding protein EngA [Prochlorococcus marinus subsp. pastoris
str. CCMP1986]
gi|41017012|sp|Q7V2S6.1|DER_PROMP RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|33639680|emb|CAE18850.1| GTP-binding protein (HSR1-related) [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
Length = 458
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 87/190 (45%), Positives = 108/190 (56%), Gaps = 32/190 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AI+GRPNVGKS L NRL N AIV D+PGVTRDR Y + W EF +VDTGG+
Sbjct: 3 LPSIAIIGRPNVGKSTLVNRLCQSNDAIVFDKPGVTRDRTYQNASWAGREFQVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ ED + E +P I Q A+EE+ + +F+VDG
Sbjct: 62 --------VFEDDS-------EFLP-------------EIRTQVFLALEEASLALFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
G+T D IA WLR + I+AVNKCES G+ SEFW LG P P+SAI G
Sbjct: 94 NQGVTDGDLSIAKWLRNSACK--TIVAVNKCESTSLGVSLASEFWKLGLGEPYPVSAIHG 151
Query: 342 TGTGELLDLV 351
+GTG+LLDLV
Sbjct: 152 SGTGDLLDLV 161
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 83/185 (44%), Gaps = 38/185 (20%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
++I+GRPNVGKS+L N + G RAIV D G T D + H + +VDT G+
Sbjct: 180 MSIIGRPNVGKSSLLNAICGEKRAIVSDISGTTTDSIDTLIKKDSHLWKIVDTAGI---- 235
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+ + N + T + R A +I+ S V + ++D G
Sbjct: 236 RRKKN---------------VKYGTEFFGINR--------AFKSIDRSDVCVLVIDAIDG 272
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQV-----SEFWSLGFSPLP-I 336
+T D+++A R + ++ VNK E I QV S+ + L +S + I
Sbjct: 273 VTDQDQKLAG--RIEEQGRACVIVVNKWDLVEKNNSTIYQVEKELRSKLYFLHWSKMIFI 330
Query: 337 SAISG 341
SA++G
Sbjct: 331 SALTG 335
>gi|383762669|ref|YP_005441651.1| GTPase Der [Caldilinea aerophila DSM 14535 = NBRC 104270]
gi|381382937|dbj|BAL99753.1| GTPase Der [Caldilinea aerophila DSM 14535 = NBRC 104270]
Length = 456
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 95/193 (49%), Positives = 118/193 (61%), Gaps = 20/193 (10%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFNRL+G AIV DEPG TRDR+YG S W F+++DTGG+
Sbjct: 6 PVVALVGRPNVGKSTLFNRLIGRPVAIVEDEPGTTRDRIYGESDWNGVGFIVIDTGGL-- 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
P M T EG T E+ VA ++ QA AI+E+ II +VDG+
Sbjct: 64 ---EAPETMR------TRHSEGAQ-TTSESLVA----SVQNQAQLAIDEADAIIMIVDGR 109
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
+GLTAADEEIA LR++ +K + LAVNK ES ++ EFW+LG P PISA G
Sbjct: 110 SGLTAADEEIASVLRQS--NKPVFLAVNKAES-QEVRQNAVEFWALGLGEPYPISAYHGD 166
Query: 343 GTGELLDLVCSEL 355
G G+LLD V L
Sbjct: 167 GVGDLLDEVVKVL 179
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 92/200 (46%), Gaps = 44/200 (22%)
Query: 148 QKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSF 207
+++ K TIG VAIVGRPNVGKS+L N LVG R+IV PG TRD +
Sbjct: 185 EEEEKETIG---------VAIVGRPNVGKSSLLNALVGQERSIVSAVPGTTRDPIDMEIT 235
Query: 208 WGEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQAT 267
L+DT G+ + + I + +V R +
Sbjct: 236 CEGQRITLIDTAGIRRRGRIEQGI-------------------EQYSVLR--------SM 268
Query: 268 AAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFW 327
AI+ S V + L+D Q G+TA D IA ++ + Y K +++ VNK ++ K + E+
Sbjct: 269 RAIDRSDVALLLIDAQEGVTAQDTHIAGYVLERY--KSVVVVVNKWDAVEKDSHTMVEYT 326
Query: 328 S-----LGFSP-LPISAISG 341
+ L F P +P+ IS
Sbjct: 327 NAVREQLNFMPYVPVLFISA 346
>gi|298246134|ref|ZP_06969940.1| ribosome-associated GTPase EngA [Ktedonobacter racemifer DSM 44963]
gi|297553615|gb|EFH87480.1| ribosome-associated GTPase EngA [Ktedonobacter racemifer DSM 44963]
Length = 474
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 86/195 (44%), Positives = 116/195 (59%), Gaps = 20/195 (10%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+ P VAIVGRPNVGKS FNR++G AIV D PG TRDR+YG + W EF L+DTGG+
Sbjct: 1 MKPLVAIVGRPNVGKSTFFNRMIGERVAIVEDMPGTTRDRLYGDADWNGREFTLIDTGGL 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+L +G G+ + + QA AIEE+ VI+F+VD
Sbjct: 61 ------------ELGTGIPVGQVGLT-----GQSGDIMDHVMSQAQLAIEEADVIVFMVD 103
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
++G+TAAD+E+AD LR+ K +ILA NK ++ + + V EF+SLG P IS+I
Sbjct: 104 ARSGITAADDEVADLLRRRAT-KPVILAANKADNAERR-LDVVEFYSLGLGEPTDISSIQ 161
Query: 341 GTGTGELLDLVCSEL 355
GTGTG+LLD + L
Sbjct: 162 GTGTGDLLDRIVEAL 176
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 76/151 (50%), Gaps = 29/151 (19%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
PR+AIVGRPNVGKS+L N ++G NR+IV D PG TRD + +G+ + LVDT G+
Sbjct: 191 PRIAIVGRPNVGKSSLLNAILGVNRSIVSDIPGTTRDAIDTELEFGDQKIKLVDTAGIRR 250
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ + + +V R +T AIE V + L+D
Sbjct: 251 RGRVG-------------------VGVEKYSVLR--------STRAIERCDVALMLIDAS 283
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
GLTA D IA + + M K +I+ VNK +
Sbjct: 284 EGLTAQDTHIAGTIHE--MGKGVIVVVNKWD 312
>gi|309791206|ref|ZP_07685738.1| small GTP-binding protein [Oscillochloris trichoides DG-6]
gi|308226768|gb|EFO80464.1| small GTP-binding protein [Oscillochloris trichoides DG6]
Length = 525
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 85/187 (45%), Positives = 110/187 (58%), Gaps = 27/187 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS FNRL+G RAIV D PG TRDR+YG +FW +F +VDT G+L
Sbjct: 69 PIVALVGRPNVGKSTFFNRLIGERRAIVEDMPGTTRDRIYGDTFWNGRDFTVVDTAGLL- 127
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
PN+ VA M QA AIEE+ +IF+VDG+
Sbjct: 128 FGGDDPNL----------------------PVAEMSRRTREQANLAIEEADAVIFMVDGR 165
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TAAD E+AD LR K ++LAVNKC+S + + V EF++L P+P+SA
Sbjct: 166 EGMTAADNEVADVLRGT--SKPVVLAVNKCDSVERNLDAV-EFYALNLGEPIPMSAFHSL 222
Query: 343 GTGELLD 349
GTG++LD
Sbjct: 223 GTGDVLD 229
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 88/195 (45%), Gaps = 40/195 (20%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGR-SFWGEHEFMLVDTGGVLNV 224
+AIVGRPNVGKS+L N+L+G R++V PG TRD + +F GE L+DT G+
Sbjct: 250 IAIVGRPNVGKSSLLNKLLGQERSVVSAIPGTTRDSIDTEITFHGER-VTLIDTAGIRRS 308
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + I E ++ T+ AIE V + L+D +
Sbjct: 309 GRIEQGI-EKYSVMRTL--------------------------RAIERCDVALLLIDAEE 341
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSE--------FWSLGFSP-LP 335
G+TA D IA + K I + VNK + K E F + ++P L
Sbjct: 342 GITAQDTHIAGMVLD--AKKGIAILVNKWDVIEKDNETFQEYEDQVRQAFKFIDYAPVLF 399
Query: 336 ISAISGTGTGELLDL 350
ISA+SG ++ L
Sbjct: 400 ISALSGQRVSRVIQL 414
>gi|449015597|dbj|BAM78999.1| GTP-binding protein of engA family [Cyanidioschyzon merolae strain
10D]
Length = 668
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 119/330 (36%), Positives = 159/330 (48%), Gaps = 54/330 (16%)
Query: 37 RSFSPQLLSLSLHKHYPLPLPLTRHLRSLSPSNDAVSSSNDDAFEDSPFEDEDDDAEYED 96
R + +L + S HK LP S + V S+DD S + D A +
Sbjct: 82 RVATARLKASSTHKESNLP----------SSRQELVPKSSDDPAAASALRN-DAQATSPE 130
Query: 97 VDDESDGQDFGIDVDALEREAKDAVREYSSLLSRQLIIQDETDDRKDSGKKQKKRKT-TI 155
D E D G+ + R A D V E S+ + + ET R ++ +R T
Sbjct: 131 TDTEPS-SDAGLSEN---RTASDGVTEDLSIRG-EAVTSAETGLRDETSPAAAERSAATS 185
Query: 156 GNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNR--AIVVDEPGVTRDRMYGRSFWGEHEF 213
G + LP VA++GRPNVGKS L NR+ G R A+V D PGVTRDR Y + W F
Sbjct: 186 GVYRKSSLPLVAVIGRPNVGKSMLVNRISGTFRTGAVVEDTPGVTRDRTYQLANWSGRHF 245
Query: 214 MLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEES 273
+VDTGG+ + ED T G IP I +QA A+ E+
Sbjct: 246 RVVDTGGL---------VFED-----TPGDVFIP-------------QIRQQALIALREA 278
Query: 274 CVIIFLVDGQAGLTAADEEIADWLRKNYMDKF-------IILAVNKCESPRKGIMQVSEF 326
V++ +VDGQ G+T D++IA +LRK + I++AVNKCES G Q +EF
Sbjct: 279 DVVVLVVDGQQGVTTLDQDIAVFLRKTCDARGILGRRIPIVVAVNKCESQTMGEAQAAEF 338
Query: 327 WSLGF-SPLPISAISGTGTGELLDLVCSEL 355
W LG PL IS+I G+G ELLD VC L
Sbjct: 339 WELGLGQPLAISSIHGSGVAELLDEVCYYL 368
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 69/146 (47%), Gaps = 41/146 (28%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRM----------YGRSFWG 209
E + RVAI+GRPNVGKS+L N L+G R IV PG TRD + GR
Sbjct: 383 ESGMRRVAIIGRPNVGKSSLLNALLGEERVIVSAVPGTTRDAIDELLIQRDPRTGR---- 438
Query: 210 EHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAA 269
E ++L+DT G+ + + N+ G E MI R A A
Sbjct: 439 ETCYLLIDTAGI----RRKKNV--------EYGTEFF--------------MINR-AFKA 471
Query: 270 IEESCVIIFLVDGQAGLTAADEEIAD 295
I + V++ ++D + G+T D E+A+
Sbjct: 472 IRRADVVLLVLDMEEGITDQDAELAE 497
>gi|219850590|ref|YP_002465023.1| GTP-binding protein EngA [Chloroflexus aggregans DSM 9485]
gi|254783144|sp|B8GAY7.1|DER_CHLAD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|219544849|gb|ACL26587.1| small GTP-binding protein [Chloroflexus aggregans DSM 9485]
Length = 449
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/187 (46%), Positives = 111/187 (59%), Gaps = 27/187 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS FNRL+G RAIV D PG TRDR+YG +FW EF +VDT G+L
Sbjct: 4 PIVAIVGRPNVGKSTFFNRLIGERRAIVEDIPGTTRDRLYGDTFWNGREFTVVDTAGLL- 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
G E L E +AR + QA AI E+ IIF+VDG+
Sbjct: 63 -----------------FGDEDPSLP--EVEIARRTRV---QAEHAIAEADAIIFMVDGR 100
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT AD ++AD LR K ++LAVNKC+S + ++ EF++L P+P+SA G
Sbjct: 101 DGLTTADADVADILRTT--AKPVVLAVNKCDSQER-MLDAVEFYALNLGDPIPMSAFHGL 157
Query: 343 GTGELLD 349
GTG++LD
Sbjct: 158 GTGDVLD 164
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 92/195 (47%), Gaps = 40/195 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRM-YGRSFWGEHEFMLVDTGGVLN 223
RVAIVGRPNVGKS+L NRL+G R++V PG TRD + +++GE L+DT G+
Sbjct: 184 RVAIVGRPNVGKSSLLNRLLGKERSVVSPIPGTTRDPIDTTITYYGE-PITLIDTAGIRR 242
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K + I E ++ T+ AIE V + LVD
Sbjct: 243 AGKIERGI-EKYSVLRTL--------------------------RAIERCDVAMLLVDAT 275
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS--------LGFSPLP 335
G+TA D IA + + K +IL VNK ++ K EF + ++P+
Sbjct: 276 EGVTAQDTHIAGMVIE--AKKGLILVVNKWDAITKDSQTYYEFEHRVREAFKFVDYAPIV 333
Query: 336 -ISAISGTGTGELLD 349
ISA++G LLD
Sbjct: 334 FISALTGQRVSHLLD 348
>gi|404329834|ref|ZP_10970282.1| GTP-binding protein Der [Sporolactobacillus vineae DSM 21990 =
SL153]
Length = 438
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/193 (44%), Positives = 114/193 (59%), Gaps = 34/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VGG AIV D+PGVTRDR+YG W HEF ++DTGG+
Sbjct: 4 PTVAIVGRPNVGKSTVFNRIVGGRTAIVEDKPGVTRDRLYGNGEWLNHEFHVIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E PL + A QA A++ES VI+FLVDG+
Sbjct: 62 ----------------EIGDE--PLLGQMRA----------QAEIAVDESDVIVFLVDGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE++A LR++ K +++ VNK ++ + + V EF++LG PLP+S G
Sbjct: 94 TGMTDADEQVAQILRRS--GKPVVVGVNKLDNYAQRNL-VYEFYTLGLGDPLPLSGAHGM 150
Query: 343 GTGELLDLVCSEL 355
G G+LLD V
Sbjct: 151 GLGDLLDAVIERF 163
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 98/198 (49%), Gaps = 42/198 (21%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R A++GRPNVGKS+L N ++G R IV D G TRD + +F++VDT G+
Sbjct: 177 RFALIGRPNVGKSSLTNAILGKERVIVSDIAGTTRDAIDSEFSRDGQDFIIVDTAGI--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E T + +V R A AIEES V++ ++DG+
Sbjct: 234 -RRRGRVYE---------------KTEKYSVLR--------AQHAIEESDVVVLVIDGEE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESP----------RKGIMQVSEFWSLGFSPL 334
G+ D++IA + + +I+AVNK ++ RK I EF L ++P+
Sbjct: 270 GIIEQDKKIAGYAHD--AGRGMIIAVNKWDAVAKDDKTQDRFRKKIR--DEFQFLSYAPI 325
Query: 335 P-ISAISGTGTGELLDLV 351
+SA++G +LL ++
Sbjct: 326 IFLSALTGKRVPQLLPVI 343
>gi|27262166|gb|AAN87364.1| GTP-binding protein [Heliobacillus mobilis]
Length = 445
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/195 (46%), Positives = 111/195 (56%), Gaps = 36/195 (18%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFNRL GG AIV D PGVTRDR+Y + W EF LVDTGG+
Sbjct: 7 PIVAVVGRPNVGKSTLFNRLTGGRVAIVEDRPGVTRDRLYRNAKWLNREFTLVDTGGL-- 64
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
G +G P + +I +QA AAI E+ VI+F+VDG+
Sbjct: 65 ----------------EFGADGNPFS----------EVIYKQAEAAIAEADVILFMVDGK 98
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCE--SPRKGIMQVSEFWSLGFS-PLPISAIS 340
AG+TA DE +A LR+ K + L VNK E S R + EF++LG P+PISA
Sbjct: 99 AGITADDETVAAVLRRT--KKPVFLVVNKIEDFSQRD---KYYEFFALGLGDPIPISATH 153
Query: 341 GTGTGELLDLVCSEL 355
G TG+LLD V L
Sbjct: 154 GMNTGDLLDAVIEAL 168
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 108/227 (47%), Gaps = 44/227 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRM---YGRSFWGEHEFMLVDTGGV 221
++A++G+PNVGKS++ N ++G R IV + PG TRD + + R G+H ++L+DT G+
Sbjct: 182 KIAVIGKPNVGKSSMVNAILGEERVIVSNIPGTTRDAIDTPFERE--GKH-YVLIDTAGM 238
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
K + +V R M ++ A++ S V++ ++D
Sbjct: 239 RRKGKI------------------------DESVERYSVM---RSLRAVDRSDVVLMVID 271
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCE--------SPRKGIMQVSEFWSLGFSP 333
G+T D++IA + + K +L +NK + R + SE L ++P
Sbjct: 272 ASQGVTEQDKKIAGYAHE--AGKACVLVLNKWDLVPKDDKTMNRFDKVVRSELGFLNYAP 329
Query: 334 -LPISAISGTGTGELLDLVCSELKKVEVCIGFLLICNAITKIFHIIP 379
+ +SA++G ++L+LV ++ I +I +T I + P
Sbjct: 330 TIYVSALTGQRLPKILELVDFVTEQANRRIPTSVINELMTDIIRVTP 376
>gi|37522779|ref|NP_926156.1| GTP-binding protein EngA [Gloeobacter violaceus PCC 7421]
gi|41017005|sp|Q7NGF9.1|DER_GLOVI RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|35213781|dbj|BAC91151.1| gll3210 [Gloeobacter violaceus PCC 7421]
Length = 455
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/196 (41%), Positives = 111/196 (56%), Gaps = 32/196 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL GG+ AIV D+PGVTRDR+Y + W + F +VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTLLNRLAGGSEAIVYDQPGVTRDRLYLPAEWCGYRFEVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ ED + +PL I Q A+ E+ ++F+VDG
Sbjct: 62 --------VFEDSEVF-------LPL-------------IREQVEIALAEAAAVLFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G+T D E+ADWLR +++ NK E P + +EF++LG P +SAI G
Sbjct: 94 QQGITGGDREVADWLRGR--KPPVLIVANKLEEPSTALSLAAEFYALGLGEPYAVSAIHG 151
Query: 342 TGTGELLDLVCSELKK 357
+GTG+LLD + + L K
Sbjct: 152 SGTGDLLDALVAVLPK 167
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 160 EHLLP--RVAIVGRPNVGKSALFNRLVGGN--RAIVVDEPGVTRDRMYGRSFWGEHEFML 215
E LP RV+IVGRPNVGKS+L N LVGG R++V + G TRD + GE + L
Sbjct: 172 EQELPELRVSIVGRPNVGKSSLLNALVGGEHPRSMVSEVAGTTRDAIDTLVEHGERRYRL 231
Query: 216 VDTGGVLNVSK 226
+DT G+ S+
Sbjct: 232 IDTAGIRRKSR 242
>gi|312131342|ref|YP_003998682.1| ribosome-associated GTPase enga [Leadbetterella byssophila DSM
17132]
gi|311907888|gb|ADQ18329.1| ribosome-associated GTPase EngA [Leadbetterella byssophila DSM
17132]
Length = 437
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/192 (44%), Positives = 108/192 (56%), Gaps = 33/192 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRL+ AI ++PGVTRDR YG +FW + F L+DTGG +
Sbjct: 5 VAIVGRPNVGKSTLFNRLIEERVAITDNQPGVTRDRHYGNAFWLKKHFTLIDTGGYV--- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+G + T E A I Q AIEE+ VI+F+VD + G
Sbjct: 62 ---------------VGSDD----TFEEA-------IRSQVELAIEEATVILFVVDAKDG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP--LPISAISGTG 343
LT DEE AD LR++ FI+ NK E+ + + SEF+ +G + PISAI G+G
Sbjct: 96 LTELDEEFADVLRRSKKPVFIV--ANKAETFERANLTASEFYGMGLNSEVYPISAIDGSG 153
Query: 344 TGELLDLVCSEL 355
TGELLD C L
Sbjct: 154 TGELLDAFCEHL 165
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 78/159 (49%), Gaps = 29/159 (18%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
E +PR+AI+GRPN GKS+ N L+G +R+IV D G TRD + R +F+L DT
Sbjct: 174 EEGVPRIAILGRPNAGKSSFLNALLGKDRSIVTDIAGTTRDAIDTRYKMFGKDFILTDTA 233
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G+ + + + EDL + + ++ A+++S V I L
Sbjct: 234 GI----RKKAKVNEDLEFYSVL-----------------------RSIKALDKSDVCIIL 266
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
+D GL + D I+ + + K I+L VNK ++ K
Sbjct: 267 LDATKGLESQD--ISIIAQAHNAKKGIVLMVNKWDALEK 303
>gi|86605901|ref|YP_474664.1| GTP-binding protein EngA [Synechococcus sp. JA-3-3Ab]
gi|123506716|sp|Q2JV46.1|DER_SYNJA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|86554443|gb|ABC99401.1| GTP-binding protein EngA [Synechococcus sp. JA-3-3Ab]
Length = 459
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 86/197 (43%), Positives = 114/197 (57%), Gaps = 32/197 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA+VGRPNVGKS+L NRL G AIV DEPG+TRDR+Y W +VDTGG++
Sbjct: 3 LPLVAVVGRPNVGKSSLVNRLAGVRSAIVHDEPGITRDRLYQEVEWNGRRLRVVDTGGLV 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
S E +P I +QA AA+ E+ +IF+VDG
Sbjct: 63 FGDDS----------------EFLP-------------HIRQQAMAAMAEAHAVIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ GLT AD+E+ADWLR+ + +++AVNKCES + G+ Q + FW LG P+P SA+ G
Sbjct: 94 REGLTPADKELADWLRRQPLP--VVVAVNKCESGQLGLAQAAAFWELGLGEPIPCSAVHG 151
Query: 342 TGTGELLDLVCSELKKV 358
G ELL+ V L +V
Sbjct: 152 NGVAELLEAVLPHLPEV 168
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 91/193 (47%), Gaps = 39/193 (20%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS+L NRLVG RAIV G TRD + W + L+DT G+ S
Sbjct: 181 VAIVGRPNVGKSSLLNRLVGSERAIVSPIAGTTRDAVDTLVEWEGQSYRLIDTAGIRRKS 240
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+ + G+E + +A AI+ S V++ ++D G
Sbjct: 241 RVE------------YGVEFFSI---------------NRAFKAIQRSDVVLLVIDALEG 273
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCES-PRKGIMQVSEF--------WSLGFSPLP- 335
+T D+ +A R + I+ VNK ++ K ++E+ + + ++PL
Sbjct: 274 VTEQDQRLAG--RIEEEGRACIIVVNKWDAVENKDTHTINEYTREIRERLYFIDWAPLLF 331
Query: 336 ISAISGTGTGELL 348
+SA++G T ++
Sbjct: 332 VSALTGQRTHKIF 344
>gi|302874737|ref|YP_003843370.1| ribosome-associated GTPase EngA [Clostridium cellulovorans 743B]
gi|307690648|ref|ZP_07633094.1| GTP-binding protein EngA [Clostridium cellulovorans 743B]
gi|302577594|gb|ADL51606.1| ribosome-associated GTPase EngA [Clostridium cellulovorans 743B]
Length = 438
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/196 (43%), Positives = 115/196 (58%), Gaps = 33/196 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L G AIV D+PGVTRDR+Y S W EF ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAGKRIAIVEDKPGVTRDRIYASSEWVGQEFTIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P + + +A+M RQA AIE + VIIF+VDG+
Sbjct: 62 ----EPK-------------------SDDIILAQM----RRQALIAIETANVIIFIVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
+GLT D E+A LRK+ K I+LAVNK +S ++ + EF++LG P+ ISA G
Sbjct: 95 SGLTDTDREVAQMLRKS--KKSIVLAVNKVDSIKEEENKF-EFYNLGLGDPVAISASQGL 151
Query: 343 GTGELLDLVCSELKKV 358
G G++LD+V K +
Sbjct: 152 GLGDMLDMVVDNFKDI 167
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 40/212 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++A++G+PNVGKS+L N+L+G R IV + PG TRD + +FML+DT G+
Sbjct: 178 KIAMIGKPNVGKSSLINKLLGEERNIVSNIPGTTRDAIDSPLETEIGKFMLIDTAGLRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK + I E ++ T+ AIE + V I ++D
Sbjct: 238 SKVKEEI-ERYSVIRTL--------------------------TAIERADVCILMLDATE 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS--------LGFSP-LP 335
L+ DE+I + + ++K I++ VNK + K + +F + ++P L
Sbjct: 271 ELSEQDEKIIGYAHE--LNKAIMVIVNKWDLIEKDDKTMKKFTDDLRFKLSFMNYAPYLF 328
Query: 336 ISAISGTGTGELLDLV--CSELKKVEVCIGFL 365
ISA+SG ++L+L C + + G L
Sbjct: 329 ISALSGQRVHKVLELAKKCYDNYSKRIATGVL 360
>gi|339628052|ref|YP_004719695.1| ribosome-associated GTPase EngA [Sulfobacillus acidophilus TPY]
gi|379007685|ref|YP_005257136.1| GTP-binding protein engA [Sulfobacillus acidophilus DSM 10332]
gi|339285841|gb|AEJ39952.1| ribosome-associated GTPase EngA [Sulfobacillus acidophilus TPY]
gi|361053947|gb|AEW05464.1| GTP-binding protein engA [Sulfobacillus acidophilus DSM 10332]
Length = 438
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/194 (44%), Positives = 115/194 (59%), Gaps = 36/194 (18%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
+P VA+VGRPNVGKSALFNR+ RAIV D GVTRDR+Y + W F +VDTGG
Sbjct: 1 MPIVALVGRPNVGKSALFNRITESRRAIVEDFEGVTRDRLYQETDWNGRTFTMVDTGG-- 58
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I ED T+E+ + +M Q AI+E+ V++F+VDG
Sbjct: 59 --------IWED---------------TQESLL----TMTREQTEQAIQEADVLVFVVDG 91
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
QAG+TAAD+++AD LR++ K +ILAVNK E G + EF+ LGF PL +SA+ G
Sbjct: 92 QAGVTAADQDVADRLRRSR--KPVILAVNKAE----GKPLLGEFYQLGFGEPLLVSAVHG 145
Query: 342 TGTGELLDLVCSEL 355
G G+LLD + L
Sbjct: 146 QGIGDLLDRIVDNL 159
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 81/189 (42%), Gaps = 35/189 (18%)
Query: 159 PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDT 218
PE R+AI GRPNVGKS+L N + G R +V G TRD + ++ +DT
Sbjct: 169 PETAPVRIAIAGRPNVGKSSLLNWISGTERTLVTPIAGTTRDVVDSLVEHDGRSYLFLDT 228
Query: 219 GGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIF 278
G+ S+ I A + V R + AAI E+ V++
Sbjct: 229 AGLRRPSR-------------------IDEALEQKTVQR--------SLAAIREADVVLL 261
Query: 279 LVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI--MQVSEFWSLGF----S 332
+++ GL D+ IA + ++ ++L NK + + +Q L F +
Sbjct: 262 MLNAAEGLLGQDQRIAGQIATHHKAAVVLL--NKADLVKGSTVPLQTRVKEQLPFLSYAT 319
Query: 333 PLPISAISG 341
LPIS ++G
Sbjct: 320 VLPISVLTG 328
>gi|333979257|ref|YP_004517202.1| GTP-binding protein engA [Desulfotomaculum kuznetsovii DSM 6115]
gi|333822738|gb|AEG15401.1| GTP-binding protein engA [Desulfotomaculum kuznetsovii DSM 6115]
Length = 437
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/194 (44%), Positives = 109/194 (56%), Gaps = 35/194 (18%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNRLVG AIV DEPG+TRDR+Y + W F LVDTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNRLVGSRIAIVEDEPGITRDRLYQDAEWAGRVFTLVDTGGLDF 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
V +P + RQ AIEE+ V++FLVD +
Sbjct: 64 VESGD-----------------------------IPRQVRRQVELAIEEADVVLFLVDAR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCES-PRKGIMQVSEFWSLGFS-PLPISAISG 341
AGLT+ DE++A LR+ K ++L NK E+ R G Q+ +F+ LG P+PISA G
Sbjct: 95 AGLTSTDEDVAALLRRT--KKPVLLVANKVENFQRTG--QLVDFYRLGLGEPIPISAAQG 150
Query: 342 TGTGELLDLVCSEL 355
TG+LLD + S L
Sbjct: 151 MNTGDLLDRLVSVL 164
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 88/196 (44%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R+A++GRPNVGKS+L N ++G R IV + PG TRD + +MLVDT G+
Sbjct: 178 RIAVIGRPNVGKSSLVNAILGEQRVIVSEIPGTTRDAIDTYFEREGRRYMLVDTAGIRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
S+ E AV R + ++ A++ V + ++D
Sbjct: 238 SRI------------------------EEAVERYSVI---RSLRAVDRCEVALVVLDALE 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSL--------GFSP-LP 335
G+T D+ IA + + K +L VNK + K F L ++P +
Sbjct: 271 GVTDQDKRIAGYAHEQ--GKASVLVVNKWDLVEKDNRTTQRFTELIRRELAFMTYAPAVF 328
Query: 336 ISAISGTGTGELLDLV 351
ISA++G LL++V
Sbjct: 329 ISALTGKRVPRLLEMV 344
>gi|312128144|ref|YP_003993018.1| ribosome-associated gtpase enga [Caldicellulosiruptor
hydrothermalis 108]
gi|311778163|gb|ADQ07649.1| ribosome-associated GTPase EngA [Caldicellulosiruptor
hydrothermalis 108]
Length = 440
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/195 (44%), Positives = 114/195 (58%), Gaps = 33/195 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNRL+G RAIV D PG+TRDR+ G + W F ++DTGG+
Sbjct: 3 PTVAIVGRPNVGKSTLFNRLIGERRAIVDDTPGITRDRIIGETEWRGITFNVIDTGGIEP 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
S ED+ + + RQA AI+ S VIIF+VDG+
Sbjct: 63 YS-------EDIIL----------------------KQMRRQAQFAIDMSDVIIFMVDGK 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT AD E+A+ LR + K I+LAVNK ++ + M + EF+ LG S P+ +SA GT
Sbjct: 94 TGLTDADREVANMLRTS--KKPIVLAVNKIDNISQQAM-IYEFYELGLSDPIAMSAEHGT 150
Query: 343 GTGELLDLVCSELKK 357
G G++LD V + L K
Sbjct: 151 GVGDVLDAVVNYLNK 165
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 89/205 (43%), Gaps = 54/205 (26%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VAI+G+PN GKS+L N ++G R IV D PG TRD
Sbjct: 177 KVAIIGKPNTGKSSLVNYILGEERVIVSDIPGTTRD------------------------ 212
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMI----ER----QATAAIEESCVI 276
AI +T EGIP+ + A R S I ER + AIE S +
Sbjct: 213 -----------AIDSTFEFEGIPITLIDTAGLRRKSKIYDNVERYSMLRTLQAIERSDIC 261
Query: 277 IFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-------- 328
I L+DG ++ D ++A + + K I+AVNK ++ K E+
Sbjct: 262 IILLDGTENVSEQDAKVAGYAYE--AGKGCIVAVNKWDAVEKDEKTADEYKKQIEEKLSF 319
Query: 329 LGFSP-LPISAISGTGTGELLDLVC 352
L F+P L ISA +G +LL+ V
Sbjct: 320 LKFAPVLFISAKTGFRVKKLLETVL 344
>gi|222528757|ref|YP_002572639.1| GTP-binding protein EngA [Caldicellulosiruptor bescii DSM 6725]
gi|222455604|gb|ACM59866.1| small GTP-binding protein [Caldicellulosiruptor bescii DSM 6725]
Length = 440
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/195 (44%), Positives = 114/195 (58%), Gaps = 33/195 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNRL+G RAIV D PG+TRDR+ G + W F ++DTGG+
Sbjct: 3 PTVAIVGRPNVGKSTLFNRLIGERRAIVDDTPGITRDRIIGETEWRGITFNVIDTGGIEP 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
S ED+ + + RQA AI+ S VIIF+VDG+
Sbjct: 63 YS-------EDIIL----------------------KQMRRQAQFAIDMSDVIIFMVDGK 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT AD E+A+ LR + K I+LAVNK ++ + M + EF+ LG S P+ +SA GT
Sbjct: 94 TGLTDADREVANMLRTS--KKPIVLAVNKIDNISQQAM-IYEFYELGLSDPIAMSAEHGT 150
Query: 343 GTGELLDLVCSELKK 357
G G++LD V + L K
Sbjct: 151 GVGDVLDAVVNYLNK 165
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 89/204 (43%), Gaps = 54/204 (26%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VAI+G+PN GKS+L N ++G R IV D PG TRD
Sbjct: 177 KVAIIGKPNTGKSSLVNYILGEERVIVSDIPGTTRD------------------------ 212
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMI----ER----QATAAIEESCVI 276
AI +T EGIP+ + A R S I ER + AIE S +
Sbjct: 213 -----------AIDSTFEFEGIPITLIDTAGLRRKSKIYDNVERYSMLRTLQAIERSDIC 261
Query: 277 IFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-------- 328
I L+DG ++ D ++A + + K I+AVNK ++ K E+
Sbjct: 262 IILLDGTENVSEQDAKVAGYAYE--AGKGCIVAVNKWDAVEKDEKTADEYKKQIEEKLSF 319
Query: 329 LGFSP-LPISAISGTGTGELLDLV 351
L F+P L ISA +G +LL+ V
Sbjct: 320 LKFAPVLFISAKTGFRVKKLLETV 343
>gi|331701406|ref|YP_004398365.1| GTP-binding protein engA [Lactobacillus buchneri NRRL B-30929]
gi|406026968|ref|YP_006725800.1| GTP-binding protein [Lactobacillus buchneri CD034]
gi|329128749|gb|AEB73302.1| GTP-binding protein engA [Lactobacillus buchneri NRRL B-30929]
gi|405125457|gb|AFS00218.1| GTP-binding protein [Lactobacillus buchneri CD034]
Length = 435
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/198 (40%), Positives = 114/198 (57%), Gaps = 34/198 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA +GRPNVGKS +FNR+ G +IV D PGVTRDR+Y W +F ++DTGG
Sbjct: 3 LPTVAFIGRPNVGKSTIFNRIAGDRISIVEDTPGVTRDRIYSHGEWLATKFAMIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I + P AT+ I+ QA AI+E+ VI+F+V G
Sbjct: 61 ------------------IQISDAPFATQ----------IKSQAEIAIDEADVIVFIVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+TA DE++A L ++ DK ++LAVNK ++P + + EF+SLGF P+PIS + G
Sbjct: 93 KEGVTAEDEQVAKILYRS--DKPVVLAVNKVDNP-ESREDIYEFYSLGFGDPMPISGVHG 149
Query: 342 TGTGELLDLVCSELKKVE 359
G G+LLD V + K +
Sbjct: 150 LGLGDLLDKVVEKFPKTD 167
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 90/185 (48%), Gaps = 38/185 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R +I+GRPNVGKS+L N ++G +R IV D G TRD + R +F +VDT G+
Sbjct: 176 RFSIIGRPNVGKSSLVNAILGEDRVIVSDIAGTTRDAIDTRFEADGIKFTMVDTAGIRKR 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K N T +V R A AI++S VI+F+++ +
Sbjct: 236 GKVYEN-------------------TERYSVMR--------AMKAIDQSDVILFVMNAEE 268
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKG--------IMQVSEFWSLGFSPLP- 335
G+ D+++A + + K II VNK ++ +K + +EF + +SP+
Sbjct: 269 GIREQDKKVAGYAHE--AGKAIITVVNKWDTLKKTNHTQQDFETLIRNEFQYMSYSPIIF 326
Query: 336 ISAIS 340
+SA++
Sbjct: 327 VSAVT 331
>gi|390559319|ref|ZP_10243665.1| GTP-binding protein engA [Nitrolancetus hollandicus Lb]
gi|390174121|emb|CCF82958.1| GTP-binding protein engA [Nitrolancetus hollandicus Lb]
Length = 497
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/207 (44%), Positives = 114/207 (55%), Gaps = 27/207 (13%)
Query: 156 GNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFML 215
G +P P VAIVGRPNVGKS LFNRL+G RAIV D PG TRDR+YG + W F L
Sbjct: 48 GRIPAVAKPLVAIVGRPNVGKSTLFNRLIGERRAIVEDLPGTTRDRLYGETEWNGVTFGL 107
Query: 216 VDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCV 275
+DTGG + D I +E I AT+E QA A+EE+ +
Sbjct: 108 IDTGG----------LQSDAEIEGASSVE-IVRATQE------------QAGLALEEADL 144
Query: 276 IIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL- 334
I+FLVD QAG+TA D E+AD LR+ K I + NK ES R EF+ LG +
Sbjct: 145 ILFLVDAQAGITAGDLEVADLLRRT--RKPIYVVANKAES-RVNQESSFEFYELGLGDVF 201
Query: 335 PISAISGTGTGELLDLVCSELKKVEVC 361
P+SAI G G G+LLD + EL E
Sbjct: 202 PVSAIHGMGIGDLLDAITEELPIAEAA 228
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 74/164 (45%), Gaps = 29/164 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
+P +AIVGRPNVGKSA+ N ++G R IV PG TRD + W +L+DT G+
Sbjct: 233 VPAIAIVGRPNVGKSAILNAILGRGRQIVSPIPGTTRDAVDTELVWSGVPVVLIDTAGIR 292
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + I E ++ +A+ AI + V I ++D
Sbjct: 293 RRGRVERGI-EKYSVL--------------------------RASRAISRADVAILVLDA 325
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
TA D +A ++ + K I+L +NK + K + EF
Sbjct: 326 TEPFTAQDLHVAGYVEEQ--KKGIVLVINKWDLIEKTGETMGEF 367
>gi|159900085|ref|YP_001546332.1| GTP-binding protein EngA [Herpetosiphon aurantiacus DSM 785]
gi|238687093|sp|A9B567.1|DER_HERA2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|159893124|gb|ABX06204.1| small GTP-binding protein [Herpetosiphon aurantiacus DSM 785]
Length = 455
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/193 (43%), Positives = 113/193 (58%), Gaps = 27/193 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L+G RAI+ DE G TRDR YG + W F +VDT G+L
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLIGERRAIIADEAGTTRDRQYGETIWNGRVFTIVDTAGLL- 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
V PN +PL A + +QA AI+E+ VI+F+VD +
Sbjct: 63 VGDDDPN---------------LPL-------AEIVRRTHQQAQLAIDEADVIVFMVDVR 100
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL AADEE+A LR++ K ++L VNK ++ + V EF++LG P+ +SA GT
Sbjct: 101 EGLIAADEEVAALLRRS--SKPVVLGVNKADTEDRRQNAV-EFYNLGLGDPIALSAYHGT 157
Query: 343 GTGELLDLVCSEL 355
G+G+LLD + L
Sbjct: 158 GSGDLLDEIVRHL 170
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 89/197 (45%), Gaps = 42/197 (21%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVGRPNVGKS+L N+LVG R +V + PG TRD + + + L+DT G+
Sbjct: 184 KIAIVGRPNVGKSSLLNKLVGEERVVVSNIPGTTRDSIDTKLTYKGIPITLIDTAGIRRR 243
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ I E ++ T+ AIE + + LVD Q
Sbjct: 244 GSIEQGI-ERYSVLRTM--------------------------KAIERCHIALILVDAQE 276
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK----------CESPRKGIMQVSEFWSLGFSPL 334
G TA D +A + + +K + + VNK E + + QV F ++P+
Sbjct: 277 GPTAQDTHVAGMVLE--ANKGLAIIVNKWDLIDKAKFSYEDAKTTMSQVFHFAP--YAPI 332
Query: 335 P-ISAISGTGTGELLDL 350
ISA +G ++LD+
Sbjct: 333 EFISAKTGQRATKVLDI 349
>gi|301299471|ref|ZP_07205746.1| ribosome-associated GTPase EngA [Lactobacillus salivarius
ACS-116-V-Col5a]
gi|300852934|gb|EFK80543.1| ribosome-associated GTPase EngA [Lactobacillus salivarius
ACS-116-V-Col5a]
Length = 436
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/195 (44%), Positives = 112/195 (57%), Gaps = 34/195 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNRL G +IV D PGVTRDR+Y R+ W H F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRLAGERISIVEDTPGVTRDRIYARTEWLGHPFNLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P T+ I QA AIEE+ VIIF+V +
Sbjct: 62 ----------------DIGDE--PFLTQ----------ITEQAEIAIEEADVIIFVVSVK 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE++A L + DK ++LAVNK ++P + +F+SLGF P+P++ G
Sbjct: 94 EGVTDADEKVARILYRT--DKPVVLAVNKVDNPELR-ADIYDFYSLGFGEPIPVAGTHGI 150
Query: 343 GTGELLDLVCSELKK 357
GTG+LLD + E K
Sbjct: 151 GTGDLLDKIIKEFPK 165
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 39/202 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEH--EFMLVDTGGVL 222
+ + +GRPNVGKS+L N ++G NR IV + G TRD + R F E ++ ++DT G+
Sbjct: 176 KFSFIGRPNVGKSSLVNAILGENRVIVSNIEGTTRDAIDTR-FETEDGTKYTMIDTAGIR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A AI+ S V+ +++
Sbjct: 235 KKGKVYEN-------------------TEKYSVLR--------AMRAIDRSDVVCVVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSL------GFSPLPI 336
+ + D+ +A + + + I++ VNK ++ +K +S+F +L S PI
Sbjct: 268 EEDIREQDKHVAGYAHE--AGRAIVIVVNKWDTLKKDNKTMSDFENLIRQEFQYLSYAPI 325
Query: 337 SAISGTGTGELLDLVCSELKKV 358
+S T + LD + +K+V
Sbjct: 326 VFVSAK-TKQRLDKLPELIKRV 346
>gi|418961420|ref|ZP_13513306.1| GTP-binding protein Der [Lactobacillus salivarius SMXD51]
gi|380343952|gb|EIA32299.1| GTP-binding protein Der [Lactobacillus salivarius SMXD51]
Length = 436
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/195 (44%), Positives = 112/195 (57%), Gaps = 34/195 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNRL G +IV D PGVTRDR+Y R+ W H F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRLAGERISIVEDTPGVTRDRIYARTEWLGHPFNLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P T+ I QA AIEE+ VIIF+V +
Sbjct: 62 ----------------DIGDE--PFLTQ----------ITEQAEIAIEEADVIIFVVSVK 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE++A L + DK ++LAVNK ++P + +F+SLGF P+P++ G
Sbjct: 94 EGVTDADEKVARILYRT--DKPVVLAVNKVDNPELR-ADIYDFYSLGFGEPIPVAGTHGI 150
Query: 343 GTGELLDLVCSELKK 357
GTG+LLD + E K
Sbjct: 151 GTGDLLDKIIKEFPK 165
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 95/202 (47%), Gaps = 39/202 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEH--EFMLVDTGGVL 222
+ + +GRPNVGKS+L N ++G NR IV + G TRD + R F E ++ ++DT G+
Sbjct: 176 KFSFIGRPNVGKSSLVNAILGENRVIVSNIEGTTRDAIDTR-FETEDGTKYTMIDTAGIR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A AI+ S V+ +++
Sbjct: 235 KKGKVYEN-------------------TEKYSVLR--------AMRAIDRSDVVCVVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSL------GFSPLPI 336
+ G+ D+ +A + + + I++ VNK ++ +K +S+F +L S PI
Sbjct: 268 EEGIREQDKHVAGYAHE--AGRAIVIVVNKWDTLKKDNKTMSDFENLIRQEFQYLSYAPI 325
Query: 337 SAISGTGTGELLDLVCSELKKV 358
+S T + LD + +K+V
Sbjct: 326 VFVSAK-TKQRLDKLPELIKRV 346
>gi|375309055|ref|ZP_09774336.1| GTP-binding protein engA [Paenibacillus sp. Aloe-11]
gi|375078364|gb|EHS56591.1| GTP-binding protein engA [Paenibacillus sp. Aloe-11]
Length = 440
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 116/197 (58%), Gaps = 33/197 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR++G +IV D+PG+TRDR+YG S W F ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIIGDRLSIVEDKPGITRDRIYGISEWNGKSFSIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I E I L + I QA AIEE+ VI+F+ D +
Sbjct: 62 ----------------EIDGEDIILKS-----------IRMQAELAIEEADVIVFMSDAK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
AG+T +DEE+A L ++ K II+AVNK ++ + + + EF+S GF P+P+S GT
Sbjct: 95 AGITQSDEEVAQMLYRS--GKPIIVAVNKVDNLNRADL-IYEFYSYGFGDPIPVSGSHGT 151
Query: 343 GTGELLDLVCSELKKVE 359
G G+LLD + S L ++E
Sbjct: 152 GIGDLLDAITSNLPELE 168
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 66/132 (50%), Gaps = 27/132 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
RVA++GRPNVGKS+L N ++G R IV D G TRD + +++L+DT G+
Sbjct: 178 RVALIGRPNVGKSSLVNAILGEERVIVSDIAGTTRDAIDTPFEKDGQKYVLIDTAGM--- 234
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E T + +V R A AIE + V++ +++G+
Sbjct: 235 -RKRGKVYE---------------TTEKYSVMR--------AMRAIERADVVLVVINGEE 270
Query: 285 GLTAADEEIADW 296
G+ D+ IA +
Sbjct: 271 GIIEQDKHIAGY 282
>gi|346722769|ref|YP_001179705.2| GTP-binding protein Der [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|380865375|sp|A4XHX9.2|DER_CALS8 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|345106740|gb|ABP66514.2| small GTP-binding protein [Caldicellulosiruptor saccharolyticus DSM
8903]
Length = 439
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/200 (43%), Positives = 117/200 (58%), Gaps = 33/200 (16%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+ P VAIVGRPNVGKS LFNRL+G RAIV D PG+TRDR+ G + W F ++DTGG+
Sbjct: 1 MKPTVAIVGRPNVGKSTLFNRLIGERRAIVDDTPGITRDRIVGETEWRGITFNVIDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
S ED+ + + RQA AI+ S VIIF+VD
Sbjct: 61 EPYS-------EDIIL----------------------KQMRRQAQFAIDMSDVIIFMVD 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ GLT AD E+A+ LR + K I+LAVNK ++ + + + EF+ LG S P+P+SA
Sbjct: 92 GKTGLTDADREVANMLRVS--KKPIVLAVNKIDNISEQPI-IYEFYELGLSDPIPMSAEH 148
Query: 341 GTGTGELLDLVCSELKKVEV 360
G+G G++LD V S KV +
Sbjct: 149 GSGVGDVLDAVVSYFDKVGI 168
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 90/205 (43%), Gaps = 54/205 (26%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VAI+G+PN GKS+L N ++G R IV D PG TRD
Sbjct: 177 KVAIIGKPNTGKSSLVNYILGEERVIVSDIPGTTRD------------------------ 212
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSM----IER----QATAAIEESCVI 276
AI + + EGIPL + A R S IER + +AIE S +
Sbjct: 213 -----------AIDSYVEFEGIPLTLIDTAGLRRKSKIYDNIERYSMLRTISAIERSDIC 261
Query: 277 IFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-------- 328
+ L+DG ++ D +IA + + K I+AVNK ++ K E+
Sbjct: 262 VILLDGTEPVSEQDAKIAGYAYE--AGKGCIIAVNKWDAVEKDEKTADEYKKQIEEKLSF 319
Query: 329 LGFSP-LPISAISGTGTGELLDLVC 352
L F+P L ISA +G +LL+ V
Sbjct: 320 LKFAPVLFISAKTGFRVKKLLETVL 344
>gi|390453458|ref|ZP_10238986.1| GTP-binding protein Der [Paenibacillus peoriae KCTC 3763]
Length = 440
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 116/197 (58%), Gaps = 33/197 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR++G +IV D+PG+TRDR+YG S W F ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIIGDRLSIVEDKPGITRDRIYGISEWNGKSFSIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I E I L + I QA AIEE+ VI+F+ D +
Sbjct: 62 ----------------EIDGEDIILKS-----------IRMQAELAIEEADVIVFMSDAK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
AG+T +DEE+A L ++ K II+AVNK ++ + + + EF+S GF P+P+S GT
Sbjct: 95 AGITQSDEEVAQMLYRS--GKPIIVAVNKVDNLNRADL-IYEFYSYGFGDPIPVSGSHGT 151
Query: 343 GTGELLDLVCSELKKVE 359
G G+LLD + S L ++E
Sbjct: 152 GIGDLLDAITSNLPELE 168
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 66/132 (50%), Gaps = 27/132 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
RVA++GRPNVGKS+L N ++G R IV D G TRD + +++L+DT G+
Sbjct: 178 RVALIGRPNVGKSSLVNAILGEERVIVSDIAGTTRDAIDTPFEKDGQKYVLIDTAGM--- 234
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E T + +V R A AIE + V++ +++G+
Sbjct: 235 -RKRGKVYE---------------TTEKYSVMR--------AMRAIERADVVLVVINGEE 270
Query: 285 GLTAADEEIADW 296
G+ D+ IA +
Sbjct: 271 GIIEQDKHIAGY 282
>gi|90961863|ref|YP_535779.1| GTP-binding protein EngA [Lactobacillus salivarius UCC118]
gi|227890889|ref|ZP_04008694.1| GTP-binding protein EngA [Lactobacillus salivarius ATCC 11741]
gi|385840472|ref|YP_005863796.1| GTP-binding protein engA [Lactobacillus salivarius CECT 5713]
gi|417788385|ref|ZP_12436068.1| GTP-binding protein EngA [Lactobacillus salivarius NIAS840]
gi|417810233|ref|ZP_12456912.1| GTP-binding protein EngA [Lactobacillus salivarius GJ-24]
gi|122448999|sp|Q1WTQ4.1|DER_LACS1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|90821057|gb|ABD99696.1| GTP-binding protein [Lactobacillus salivarius UCC118]
gi|227867298|gb|EEJ74719.1| GTP-binding protein EngA [Lactobacillus salivarius ATCC 11741]
gi|300214593|gb|ADJ79009.1| GTP-binding protein engA [Lactobacillus salivarius CECT 5713]
gi|334308562|gb|EGL99548.1| GTP-binding protein EngA [Lactobacillus salivarius NIAS840]
gi|335349029|gb|EGM50529.1| GTP-binding protein EngA [Lactobacillus salivarius GJ-24]
Length = 436
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/195 (44%), Positives = 112/195 (57%), Gaps = 34/195 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNRL G +IV D PGVTRDR+Y R+ W H F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRLAGERISIVEDTPGVTRDRIYARTEWLGHPFNLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P T+ I QA AIEE+ VIIF+V +
Sbjct: 62 ----------------DIGDE--PFLTQ----------ITEQAEIAIEEADVIIFVVSVK 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE++A L + DK ++LAVNK ++P + +F+SLGF P+P++ G
Sbjct: 94 EGVTDADEKVARILYRT--DKPVVLAVNKVDNPELR-ADIYDFYSLGFGEPIPVAGTHGI 150
Query: 343 GTGELLDLVCSELKK 357
GTG+LLD + E K
Sbjct: 151 GTGDLLDKIIKEFPK 165
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 95/202 (47%), Gaps = 39/202 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEH--EFMLVDTGGVL 222
+ + +GRPNVGKS+L N ++G NR IV + G TRD + R F E ++ ++DT G+
Sbjct: 176 KFSFIGRPNVGKSSLVNAILGENRVIVSNIEGTTRDAIDTR-FETEDGTKYTMIDTAGIR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A AI+ S V+ +++
Sbjct: 235 KKGKVYEN-------------------TEKYSVLR--------AMRAIDRSDVVCVVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSL------GFSPLPI 336
+ G+ D+ +A + + + I++ VNK ++ +K +S+F +L S PI
Sbjct: 268 EEGIREQDKHVAGYAHE--AGRAIVIVVNKWDTLKKDNKTMSDFENLIRQEFQYLSYAPI 325
Query: 337 SAISGTGTGELLDLVCSELKKV 358
+S T + LD + +K+V
Sbjct: 326 VFVSAK-TKQRLDKLPELIKRV 346
>gi|86608739|ref|YP_477501.1| GTP-binding protein EngA [Synechococcus sp. JA-2-3B'a(2-13)]
gi|123502588|sp|Q2JM09.1|DER_SYNJB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|86557281|gb|ABD02238.1| GTP-binding protein EngA [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 459
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/197 (44%), Positives = 112/197 (56%), Gaps = 32/197 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS L NR+ G AIV DEPGVTRDR+Y W +VDTGG++
Sbjct: 3 LPLVAIVGRPNVGKSTLVNRMAGVRSAIVHDEPGVTRDRLYQEVEWNGRRLRVVDTGGLV 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
S E +P I +QA AA+ E+ +IF+VDG
Sbjct: 63 FGDDS----------------EFLP-------------HIRQQAMAAMAEAQAVIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ GLT AD E+ADWLRK + +++AVNKCES + G+ Q + FW LG P+P S I G
Sbjct: 94 REGLTPADVEVADWLRKQPLP--VVVAVNKCESGQMGLAQAAAFWELGLGDPIPCSGIHG 151
Query: 342 TGTGELLDLVCSELKKV 358
G ELL+ V + L +V
Sbjct: 152 NGVAELLEAVLAHLPEV 168
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 43/211 (20%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
V+IVGRPNVGKS+L NRLVG RAIV G TRD + W + L+DT G+ +
Sbjct: 181 VSIVGRPNVGKSSLLNRLVGSERAIVSPISGTTRDAIDTVVTWEGQPYRLIDTAGIRKKN 240
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+ Q I E +I +A AI+ S ++ ++D G
Sbjct: 241 RVQYGI-EFFSIN--------------------------RAFKAIQRSDAVLLVIDALEG 273
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCES-PRKGIMQVSEF--------WSLGFSPLP- 335
+T D+ +A R + ++ VNK ++ K ++EF + + ++PL
Sbjct: 274 VTEQDQRLAG--RIEEEGRACVVVVNKWDAVENKDTHTINEFTREIRDRLYFIEWAPLLF 331
Query: 336 ISAISGTGTGELLD----LVCSELKKVEVCI 362
+SA++G T ++ + +V + K+V +
Sbjct: 332 VSALTGQRTHKIFEQVNTVVAAHRKRVPTAV 362
>gi|302871345|ref|YP_003839981.1| ribosome-associated GTPase EngA [Caldicellulosiruptor obsidiansis
OB47]
gi|302574204|gb|ADL41995.1| ribosome-associated GTPase EngA [Caldicellulosiruptor obsidiansis
OB47]
Length = 440
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/198 (43%), Positives = 116/198 (58%), Gaps = 33/198 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNRL+G RAIV D PG+TRDR+ G + W F ++DTGG+
Sbjct: 3 PTVAIVGRPNVGKSTLFNRLIGERRAIVDDTPGITRDRIIGEAEWRGITFNVIDTGGIEP 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
S ED+ + + RQA AI+ S VIIF+VDG+
Sbjct: 63 YS-------EDIIL----------------------KQMRRQAQFAIDMSDVIIFIVDGK 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT AD+E+A+ LR + K I+LAVNK ++ + M + EF+ LG S P+ +SA GT
Sbjct: 94 TGLTDADKEVANMLRTS--KKPIVLAVNKIDNISQEPM-IYEFYELGLSDPIAMSAEHGT 150
Query: 343 GTGELLDLVCSELKKVEV 360
G G++LD V + L V +
Sbjct: 151 GVGDVLDAVVNYLDNVGI 168
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 95/215 (44%), Gaps = 55/215 (25%)
Query: 155 IGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFM 214
I + E+ + +VAI+G+PN GKS+L N ++G R IV D PG TRD
Sbjct: 168 INEIEENTI-KVAIIGKPNTGKSSLVNYILGEERVIVSDIPGTTRD-------------- 212
Query: 215 LVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMI----ER----QA 266
AI +T EGIP+ + A R S I ER +
Sbjct: 213 ---------------------AIDSTFEFEGIPITLIDTAGLRRKSKIYDNVERYSMLRT 251
Query: 267 TAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
AIE S + I L+DG G++ D ++A + + K I+AVNK ++ K E+
Sbjct: 252 LQAIERSDICIILLDGTEGVSEQDAKVAGYAYE--AGKGCIVAVNKWDAVEKDEKTADEY 309
Query: 327 WS--------LGFSP-LPISAISGTGTGELLDLVC 352
L F+P L ISA +G +LL+ V
Sbjct: 310 KKQIEEKLSFLKFAPVLFISAKTGFRVKKLLETVL 344
>gi|312794132|ref|YP_004027055.1| ribosome-associated gtpase enga [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|344995690|ref|YP_004798033.1| GTP-binding protein engA [Caldicellulosiruptor lactoaceticus 6A]
gi|312181272|gb|ADQ41442.1| ribosome-associated GTPase EngA [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|343963909|gb|AEM73056.1| GTP-binding protein engA [Caldicellulosiruptor lactoaceticus 6A]
Length = 440
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/195 (44%), Positives = 113/195 (57%), Gaps = 33/195 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNRL+G RAIV D PG+TRDR+ G + W F ++DTGG+
Sbjct: 3 PTVAIVGRPNVGKSTLFNRLIGERRAIVDDTPGITRDRIIGETEWRGITFNVIDTGGIEP 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
S ED+ + + RQA AI+ S VIIF+VDG+
Sbjct: 63 YS-------EDIIL----------------------KQMRRQAQFAIDMSDVIIFMVDGK 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT AD E+A+ LR + K I+LAVNK ++ + M + EF+ LG S P+ +SA GT
Sbjct: 94 TGLTDADREVANMLRTS--KKPIVLAVNKIDNISQQAM-IYEFYELGLSDPIAMSAEHGT 150
Query: 343 GTGELLDLVCSELKK 357
G G++LD V + K
Sbjct: 151 GVGDVLDAVVNYFDK 165
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 89/205 (43%), Gaps = 54/205 (26%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VAI+G+PN GKS+L N ++G R IV D PG TRD
Sbjct: 177 KVAIIGKPNTGKSSLVNYILGEERVIVSDIPGTTRD------------------------ 212
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMI----ER----QATAAIEESCVI 276
AI +T EGIP+ + A R S I ER + AIE S +
Sbjct: 213 -----------AIDSTFEFEGIPITLIDTAGLRRKSKIYDNVERYSMLRTLQAIERSDIC 261
Query: 277 IFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-------- 328
I L+DG ++ D ++A + + K I+AVNK ++ K E+
Sbjct: 262 IILLDGTEDVSEQDAKVAGYAYE--AGKGCIVAVNKWDAVEKDEKTADEYKKQIEEKLSF 319
Query: 329 LGFSP-LPISAISGTGTGELLDLVC 352
L F+P L ISA +G +LL+ V
Sbjct: 320 LKFAPVLFISAKTGFRVKKLLETVL 344
>gi|156743465|ref|YP_001433594.1| GTP-binding protein EngA [Roseiflexus castenholzii DSM 13941]
gi|156234793|gb|ABU59576.1| small GTP-binding protein [Roseiflexus castenholzii DSM 13941]
Length = 494
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/198 (43%), Positives = 114/198 (57%), Gaps = 25/198 (12%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFNRL+G RAIV D PG TRDR+YG + W F +VDT G+L
Sbjct: 3 PIVALVGRPNVGKSTLFNRLIGERRAIVEDIPGTTRDRLYGDTEWNGRVFTVVDTAGLL- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ ED T G + +A R + QA AI ES IIF+VD +
Sbjct: 62 -------LDED---DLTPGTPQLEIARR----------VREQAELAIAESDAIIFIVDSR 101
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLTAAD +A+ LR+ DK ++LA NK ++ + M EF++L P+P+SA G
Sbjct: 102 EGLTAADAAVAEVLRRT--DKPVVLAANKADNHERA-MNAVEFYALNLGEPIPMSAYHGI 158
Query: 343 GTGELLDLVCSELKKVEV 360
G G++LD V L VE+
Sbjct: 159 GVGDVLDRVTEALPVVEM 176
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVGRPNVGKS+L NRL+G R++V D PG TRD + G +L+DT G+
Sbjct: 184 KIAIVGRPNVGKSSLLNRLIGQERSVVSDIPGTTRDSIDTPIEIGGVRALLIDTAGIRRR 243
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K G+E R M +A AIE + V + L+D
Sbjct: 244 GKIDR------------GLE------------RYSVM---RALRAIERADVALLLIDATE 276
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS--------LGFSPLP- 335
G+TA D IA + ++ K + + VNK + K +F + ++PL
Sbjct: 277 GVTAQDTHIAGMILESL--KGVAILVNKWDLVVKDAYTFDQFSRHVREAFKFMSYAPLLF 334
Query: 336 ISAISGTGTGELLDLVC 352
ISA +G ++L L
Sbjct: 335 ISAKTGQRVDKVLPLAL 351
>gi|315646409|ref|ZP_07899527.1| GTP-binding protein EngA [Paenibacillus vortex V453]
gi|315278052|gb|EFU41372.1| GTP-binding protein EngA [Paenibacillus vortex V453]
Length = 440
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/197 (42%), Positives = 117/197 (59%), Gaps = 33/197 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNRL+G AIV D+PG+TRDR+YG + W F ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRLIGDRLAIVEDKPGITRDRIYGSAEWNGKAFSVIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I D I +I M QA AIEE+ VI+F+ D +
Sbjct: 62 ------EIDGDDMILKSIRM---------------------QAELAIEEADVIVFMCDAK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
AG+T +DEE+A L ++ K +IL+VNK ++ ++ + + EF+SLGF P+ IS GT
Sbjct: 95 AGVTQSDEEVAQILFRS--GKPVILSVNKVDNLKR-VDDIYEFYSLGFGDPVGISGSHGT 151
Query: 343 GTGELLDLVCSELKKVE 359
G G+LLD+V L ++E
Sbjct: 152 GIGDLLDVVVENLPELE 168
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
RVA++GRPNVGKS+L N ++G R IV D G TRD + ++L+DT G+
Sbjct: 178 RVALIGRPNVGKSSLVNAILGEERVIVSDVAGTTRDAIDTPFEKDGQRYVLIDTAGM--- 234
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E T + +V R A AIE + V++ L++G+
Sbjct: 235 -RKRGKVYE---------------TTEKYSVMR--------AMRAIERADVVLVLINGEE 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ IA + + K + VNK + K + +F
Sbjct: 271 GIIEQDKHIAGYAYE--AGKASLFVVNKWDMVEKEDKTMQQF 310
>gi|312143875|ref|YP_003995321.1| ribosome-associated GTPase EngA [Halanaerobium hydrogeniformans]
gi|311904526|gb|ADQ14967.1| ribosome-associated GTPase EngA [Halanaerobium hydrogeniformans]
Length = 438
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 84/195 (43%), Positives = 112/195 (57%), Gaps = 32/195 (16%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRLVGG RAIV EP VTRDR+YG + W + F ++DTGG+
Sbjct: 6 VAIVGRPNVGKSTLFNRLVGGRRAIVEGEPNVTRDRIYGEAEWLDRTFNVIDTGGI---- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+P + E + + I+ QA A+EE+ VI+F+VD + G
Sbjct: 62 --------------------VPRDSDE-----IKNKIKYQAELAMEEADVILFVVDSRTG 96
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+T D+EIA L + +K ++L VNK E EF+SLGF P+ ISA G T
Sbjct: 97 MTGIDQEIAQLLYRT--NKEVLLVVNKVEDFSNQQEISWEFYSLGFGDPILISAEHGKNT 154
Query: 345 GELLDLVCSELKKVE 359
GELL+ + +EL + E
Sbjct: 155 GELLEKISAELPEYE 169
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 98/199 (49%), Gaps = 36/199 (18%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+A++G+PNVGKS+L N LVG NR IV D PG TRD + W + +F +DT G+
Sbjct: 180 IAVIGKPNVGKSSLINHLVGENRVIVSDMPGTTRDAVDTLIEWKDIKFNFIDTAGL---- 235
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+ + + E + + + +A +++ S ++ ++D G
Sbjct: 236 RRKSRVKESIEYYSNL-----------------------RALKSVDRSDAVLMMIDATKG 272
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSE-----FWSLGF-SPLPISAI 339
++ D++IA + K +++A+NK + +K + ++ L F + +PI+ I
Sbjct: 273 VSDQDKKIAGYAHDE--GKAMVIAINKWDLMKKDSKTMKRYTDEVYYELKFLNYVPITYI 330
Query: 340 SGTGTGELLDLVCSELKKV 358
S TGE +D + S L+ V
Sbjct: 331 SAL-TGERIDEMLSLLEYV 348
>gi|312134636|ref|YP_004001974.1| ribosome-associated gtpase enga [Caldicellulosiruptor owensensis
OL]
gi|311774687|gb|ADQ04174.1| ribosome-associated GTPase EngA [Caldicellulosiruptor owensensis
OL]
Length = 440
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 86/198 (43%), Positives = 115/198 (58%), Gaps = 33/198 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNRL+G RAIV D PG+TRDR+ G + W F ++DTGG+
Sbjct: 3 PTVAIVGRPNVGKSTLFNRLIGERRAIVDDTPGITRDRIIGETEWRGITFNVIDTGGIEP 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
S ED+ + + RQA A++ S VIIF+VDG+
Sbjct: 63 YS-------EDIIL----------------------KQMRRQAQFAVDMSDVIIFIVDGK 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT AD E+A+ LR + K I+LAVNK ++ + M + EF+ LG S P+ +SA GT
Sbjct: 94 TGLTDADREVANMLRAS--KKPIVLAVNKIDNISQEPM-IYEFYELGLSDPIAMSAEHGT 150
Query: 343 GTGELLDLVCSELKKVEV 360
G G++LD V + L V +
Sbjct: 151 GVGDVLDAVVNYLDNVGI 168
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 90/205 (43%), Gaps = 54/205 (26%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VAI+G+PN GKS+L N ++G R IV D PG TRD
Sbjct: 177 KVAIIGKPNTGKSSLVNYILGEERVIVSDIPGTTRD------------------------ 212
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMI----ER----QATAAIEESCVI 276
AI +T EGIP+ + A R S I ER + AIE S +
Sbjct: 213 -----------AIDSTFEFEGIPITLIDTAGLRRKSKIYDNVERYSMLRTLQAIERSDIC 261
Query: 277 IFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-------- 328
I L+DG G++ D +IA + + K I+AVNK ++ K E+
Sbjct: 262 IILLDGTEGVSEQDAKIAGYAYE--AGKGCIIAVNKWDAVEKDEKTADEYKKQIEEKLSF 319
Query: 329 LGFSP-LPISAISGTGTGELLDLVC 352
L F+P L ISA +G +LL+ +
Sbjct: 320 LKFAPVLFISAKTGFRVKKLLETIL 344
>gi|254431747|ref|ZP_05045450.1| GTP-binding protein EngA [Cyanobium sp. PCC 7001]
gi|197626200|gb|EDY38759.1| GTP-binding protein EngA [Cyanobium sp. PCC 7001]
Length = 441
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 82/185 (44%), Positives = 100/185 (54%), Gaps = 36/185 (19%)
Query: 174 VGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL--NVSKSQPNI 231
+GKS L NRL AIV D+PGVTRDR Y FWG+ F +VDTGG++ + S+ P I
Sbjct: 1 MGKSTLVNRLCRSREAIVHDQPGVTRDRTYQEGFWGDRTFRVVDTGGLVFDDDSEFLPEI 60
Query: 232 MEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGLTAADE 291
E QA A+ E+ V + +VDGQ G TAADE
Sbjct: 61 RE-------------------------------QANLALAEASVALVIVDGQQGCTAADE 89
Query: 292 EIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGTGELLDL 350
IA WLR + ++LAVNKCESP G+ +EFW LG P PISAI G GTG+LLD
Sbjct: 90 AIAAWLRGQNVP--VLLAVNKCESPEAGLAMAAEFWGLGLGEPHPISAIHGAGTGDLLDQ 147
Query: 351 VCSEL 355
V L
Sbjct: 148 VIGHL 152
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 31/155 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS+L N + G NRAIV G TRD + + L+DT G+
Sbjct: 165 QLAIIGRPNVGKSSLLNAVCGENRAIVSPIRGTTRDTIDTTIEREGKTWKLLDTAGI--- 221
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIE-RQATAAIEESCVIIFLVDGQ 283
R +V P ++ AIE S V + ++D
Sbjct: 222 -------------------------RRRRSVNYGPEFFGINRSFKAIERSDVCVLVIDAL 256
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+T D+ +A + ++ + ++ VNK ++ K
Sbjct: 257 DGVTEQDQRLAGRIEED--GRACVVVVNKWDAIEK 289
>gi|433444814|ref|ZP_20409556.1| ribosome-associated GTPase EngA [Anoxybacillus flavithermus
TNO-09.006]
gi|432001354|gb|ELK22232.1| ribosome-associated GTPase EngA [Anoxybacillus flavithermus
TNO-09.006]
Length = 436
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 91/213 (42%), Positives = 122/213 (57%), Gaps = 44/213 (20%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y + W F ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIVGERISIVEDVPGVTRDRIYSSAEWLNTTFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E PL T+ I +QA AI+E+ VIIF+ +G+
Sbjct: 62 ----------------DIGDE--PLLTQ----------IRQQAEIAIDEADVIIFMTNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAIS 340
G+TAADEE+A L ++ +K ++LAVNK ++P R+ I +F++LGF P+PIS
Sbjct: 94 DGVTAADEEVAKILYRS--NKPVVLAVNKIDNPDMRENIY---DFYTLGFGEPIPISGTH 148
Query: 341 GTGTGELLDLVCSELKKVEV------CIGFLLI 367
G G G+LLD V + K E I F LI
Sbjct: 149 GLGIGDLLDAVVAHFPKRETKEYDADVIKFCLI 181
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 80/162 (49%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+ ++GRPNVGKS+L N ++G R IV D G TRD + E++++DT G+
Sbjct: 177 KFCLIGRPNVGKSSLVNAILGEERVIVSDIAGTTRDAIDTTFKRDGQEYVIIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ +++ +
Sbjct: 234 -RKRGKVYE---------------STEKYSVLR--------ALKAIERSDVVLVVINAEE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D++IA + + + +++ VNK ++ K ++EF
Sbjct: 270 GIIEQDKKIAGYAHE--AGRGVVIVVNKWDAIEKDEKTMNEF 309
>gi|254423770|ref|ZP_05037488.1| GTPase, putative [Synechococcus sp. PCC 7335]
gi|196191259|gb|EDX86223.1| GTPase, putative [Synechococcus sp. PCC 7335]
Length = 449
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 101/178 (56%), Gaps = 32/178 (17%)
Query: 179 LFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIMEDLAIT 238
L NR GG ++IV D+PGVTRDR Y +FW + EF+ VDTGG+ + +D
Sbjct: 2 LVNRFAGGRQSIVFDQPGVTRDRTYQPAFWKDREFLAVDTGGL---------VFDD---- 48
Query: 239 TTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLR 298
E +P I QA A+ E+ +F+VDGQ G T D+EIA W+R
Sbjct: 49 ---DTEFLP-------------YIREQAMTALSEAAAALFVVDGQIGPTEGDQEIASWMR 92
Query: 299 KNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGTGELLDLVCSEL 355
+ ++LAVNKCESP +GI+Q ++FW LG P +SAI G+GTGELLD + L
Sbjct: 93 SQNIP--VVLAVNKCESPDEGIIQAAQFWELGLGEPYAVSAIHGSGTGELLDALVEHL 148
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 98/215 (45%), Gaps = 52/215 (24%)
Query: 160 EHLLP----------RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWG 209
EHL P RVAIVGRPNVGKS++ N VG NR+IV G TRD + G
Sbjct: 146 EHLPPADQIETVDEYRVAIVGRPNVGKSSILNAFVGENRSIVSPISGTTRDAIDMVVTRG 205
Query: 210 ----EHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQ 265
+ + L+DT G+ + + N+ G E + +
Sbjct: 206 DGDDQKRYRLIDTAGI----RKKKNV--------DFGPEYFGI---------------NR 238
Query: 266 ATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSE 325
A AI+ + V++ ++D G+T D+++A + + + ++ VNK ++ K + E
Sbjct: 239 AFKAIKRADVVLLVIDALDGVTEQDQKLAGRIEEE--GRACVIVVNKWDAIDKDSHTIYE 296
Query: 326 F--------WSLGFSP-LPISAISGTGTGELLDLV 351
F LG++ L +SA++G ++LD V
Sbjct: 297 FDKKIEAKIHFLGWAKRLYVSALTGQRLPKILDAV 331
>gi|399949830|gb|AFP65487.1| GTP-binding protein EngA [Chroomonas mesostigmatica CCMP1168]
Length = 529
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/202 (41%), Positives = 110/202 (54%), Gaps = 32/202 (15%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGG--NRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
P + +VGR NVGKS L NR+ G N +IV D G+TRD+ Y R FW HEF++ DTGG
Sbjct: 88 PIITVVGRSNVGKSTLVNRISGEFENGSIVYDTDGITRDKTYRRGFWCGHEFLITDTGGF 147
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ K N E I+ QA +AI+E+ VI+F+VD
Sbjct: 148 VFDEKIFQNWTES---------------------------IKEQALSAIQEANVIVFVVD 180
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAIS 340
GQ GLT D E+A++L+ + ++LAVNKCE+ S FWSLG P+P+S I
Sbjct: 181 GQCGLTNNDLELANYLK--FQKIPVVLAVNKCENLNLFETNCSRFWSLGIGKPIPVSGIH 238
Query: 341 GTGTGELLDLVCSELKKVEVCI 362
GT T +LL+ V S L KV I
Sbjct: 239 GTNTDQLLERVTSFLPKVNFPI 260
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 72/154 (46%), Gaps = 39/154 (25%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRD----RMYGRSFWGEHEFMLVDTGG 220
+VAI+G+PNVGKS++ N L RAIV D PG TRD + G S + F +DT G
Sbjct: 266 KVAIIGKPNVGKSSILNFLTNKKRAIVSDLPGTTRDSNDSYISGGSNCNVYNF--IDTAG 323
Query: 221 VLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPS--MIERQATAAIEESCVIIF 278
+ ++ + P M+ R +I++S ++F
Sbjct: 324 I----------------------------RKKKMIEYGPEFFMVNR-TFKSIQKSECVLF 354
Query: 279 LVDGQAGLTAADEEIADWLRKNYMDKFIILAVNK 312
++D G+T D+++++ +R+ K ++ NK
Sbjct: 355 VIDSLKGITEQDQKLSERVRQ--QGKACVIVFNK 386
>gi|452990286|emb|CCQ98500.1| GTPase essential for ribosome 50S subunit assembly [Clostridium
ultunense Esp]
Length = 440
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/200 (43%), Positives = 115/200 (57%), Gaps = 38/200 (19%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FN ++G AIV D PGVTRDR+YG + W ++ F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNHIMGERIAIVEDRPGVTRDRIYGTTEWLDYPFHLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+G E M + QA AI+E+ VI+F+VDG+
Sbjct: 62 ----------------EVGSED-----------EMLLQVRTQAELAIDEADVILFIVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK--GIMQVSEFWSLGFS-PLPISAIS 340
+GLT+ DEEIA L ++ K ++L VNK + P + GIM EF+ LGF P P+S
Sbjct: 95 SGLTSTDEEIAGLLFRS--GKPVVLVVNKVDHPNQLPGIM---EFYRLGFGEPFPVSGAH 149
Query: 341 GTGTGELLDLVCSEL-KKVE 359
GTG G+LLD V +K+E
Sbjct: 150 GTGFGDLLDEVIKHFPEKIE 169
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 77/154 (50%), Gaps = 29/154 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
RVA++GRPNVGKS+L N ++G R IV + G TRD + +++L+DT G+
Sbjct: 178 RVALIGRPNVGKSSLVNAILGEERVIVSEVAGTTRDAVDTPFVHEGQKYLLIDTAGM--- 234
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E T + +V R A AAIE S V + +++G+
Sbjct: 235 -RKRGKVYE---------------TTEKYSVLR--------ALAAIERSDVALVVLNGEQ 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+ D++IA + + + +IL VNK + K
Sbjct: 271 GIIEQDKKIAGYAHQ--AGRGVILLVNKWDKVEK 302
>gi|347525632|ref|YP_004832380.1| GTP-binding protein EngA [Lactobacillus ruminis ATCC 27782]
gi|345284591|gb|AEN78444.1| GTP-binding protein EngA [Lactobacillus ruminis ATCC 27782]
Length = 436
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/193 (44%), Positives = 110/193 (56%), Gaps = 34/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y RS W F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTVFNRIAGERISIVEDTPGVTRDRIYARSEWMGQAFNLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P T+ I QA AI+E+ VI+F+ +
Sbjct: 62 ----------------DIGDE--PFVTQ----------ITEQAEIAIDEADVIVFVTSVK 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE++A L K DK +ILAVNK ++P ++ +F+SLGF P+PIS G
Sbjct: 94 EGVTDADEKVARILYKT--DKPVILAVNKVDNPEVR-SEIYDFYSLGFGDPVPISGTHGI 150
Query: 343 GTGELLDLVCSEL 355
GTG+LLDL+
Sbjct: 151 GTGDLLDLIVKNF 163
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 89/197 (45%), Gaps = 39/197 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHE-FMLVDTGGVLN 223
+ + +GRPNVGKS+L N ++G NR IV + G TRD + + + + ++DT G+
Sbjct: 176 KFSFIGRPNVGKSSLVNAILGENRVIVSNIEGTTRDAIDTKFTTDDGSVYTMIDTAGIRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V+ +++ +
Sbjct: 236 KGKVYEN-------------------TEKYSVLR--------AMQAIDRSDVVCVVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSPLP 335
G+ D+ +A + + I++ VNK ++ +K + SEF L ++P+
Sbjct: 269 EGIREQDKHVAGYAHD--AGRGIVIVVNKWDTLQKDSYTMKEFESHIRSEFQYLSYAPIV 326
Query: 336 -ISAISGTGTGELLDLV 351
+SA + EL L+
Sbjct: 327 FVSAKTHQRLNELPKLI 343
>gi|212638926|ref|YP_002315446.1| GTP-binding protein EngA [Anoxybacillus flavithermus WK1]
gi|212560406|gb|ACJ33461.1| Predicted GTPase [Anoxybacillus flavithermus WK1]
Length = 449
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/199 (43%), Positives = 118/199 (59%), Gaps = 38/199 (19%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y + W F ++DTGG+
Sbjct: 17 PVVAIVGRPNVGKSTIFNRIVGERISIVEDVPGVTRDRIYSSAEWLNTTFNMIDTGGI-- 74
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E PL T+ I +QA AI+E+ VIIF+ +G+
Sbjct: 75 ----------------DIGDE--PLLTQ----------IRQQAEIAIDEADVIIFMTNGR 106
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAIS 340
G+TAADEE+A L ++ +K ++LAVNK ++P R+ I +F++LGF P+PIS
Sbjct: 107 DGVTAADEEVAKILYRS--NKPVVLAVNKIDNPDMRENIY---DFYTLGFGEPIPISGTH 161
Query: 341 GTGTGELLDLVCSELKKVE 359
G G G+LLD V + K E
Sbjct: 162 GLGIGDLLDAVVAHFPKRE 180
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 80/162 (49%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+ ++GRPNVGKS+L N ++G R IV D G TRD + E++++DT G+
Sbjct: 190 KFCLIGRPNVGKSSLVNAILGEERVIVSDIAGTTRDAIDTTFKRDGQEYVIIDTAGM--- 246
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ +++ +
Sbjct: 247 -RKRGKVYE---------------STEKYSVLR--------ALKAIERSDVVLVVINAEE 282
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D++IA + + + +++ VNK ++ K ++EF
Sbjct: 283 GIIEQDKKIAGYAHE--AGRGVVIVVNKWDAIEKDEKTMNEF 322
>gi|323340745|ref|ZP_08080997.1| ribosome-associated GTPase EngA [Lactobacillus ruminis ATCC 25644]
gi|417974258|ref|ZP_12615079.1| GTP-binding protein Der [Lactobacillus ruminis ATCC 25644]
gi|323091868|gb|EFZ34488.1| ribosome-associated GTPase EngA [Lactobacillus ruminis ATCC 25644]
gi|346329255|gb|EGX97553.1| GTP-binding protein Der [Lactobacillus ruminis ATCC 25644]
Length = 436
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/193 (44%), Positives = 110/193 (56%), Gaps = 34/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y RS W F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTVFNRIAGERISIVEDTPGVTRDRIYARSEWMGQAFNLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P T+ I QA AI+E+ VI+F+ +
Sbjct: 62 ----------------DIGDE--PFVTQ----------ITEQAEIAIDEADVIVFVTSVK 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE++A L K DK +ILAVNK ++P ++ +F+SLGF P+PIS G
Sbjct: 94 EGVTDADEKVARILYKT--DKPVILAVNKVDNPEVR-SEIYDFYSLGFGDPVPISGTHGI 150
Query: 343 GTGELLDLVCSEL 355
GTG+LLDL+
Sbjct: 151 GTGDLLDLIVKNF 163
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 47/214 (21%)
Query: 155 IGNVPEHLLPRV------AIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFW 208
+ N PE + + + +GRPNVGKS+L N ++G NR IV + G TRD + F
Sbjct: 160 VKNFPEDVTEEIDDSIKFSFIGRPNVGKSSLVNAILGENRVIVSNIEGTTRDAI-DTKFT 218
Query: 209 GEHE--FMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQA 266
E + ++DT G+ K N T + +V R A
Sbjct: 219 TEDGSVYTMIDTAGIRKKGKVYEN-------------------TEKYSVLR--------A 251
Query: 267 TAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
AI+ S V+ +++ + G+ D+ +A + + I++ VNK ++ +K + EF
Sbjct: 252 MQAIDRSDVVCVVLNAEEGIREQDKHVAGYAHD--AGRGIVIVVNKWDTLKKDSYTMKEF 309
Query: 327 WS--------LGFSPLP-ISAISGTGTGELLDLV 351
S L ++P+ +SA + EL L+
Sbjct: 310 ESHIRNEFQYLSYAPIVFVSAKTHQRLNELPKLI 343
>gi|335996764|ref|ZP_08562681.1| GTP-binding protein EngA [Lactobacillus ruminis SPM0211]
gi|335351834|gb|EGM53325.1| GTP-binding protein EngA [Lactobacillus ruminis SPM0211]
Length = 436
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/193 (44%), Positives = 110/193 (56%), Gaps = 34/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y RS W F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTVFNRIAGERISIVEDTPGVTRDRIYARSEWMGQAFNLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P T+ I QA AI+E+ VI+F+ +
Sbjct: 62 ----------------DIGDE--PFVTQ----------ITEQAEIAIDEADVIVFVTSVK 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE++A L K DK +ILAVNK ++P ++ +F+SLGF P+PIS G
Sbjct: 94 EGVTDADEKVARILYKT--DKPVILAVNKVDNPEVR-SEIYDFYSLGFGDPVPISGTHGI 150
Query: 343 GTGELLDLVCSEL 355
GTG+LLDL+
Sbjct: 151 GTGDLLDLIVKNF 163
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 89/198 (44%), Gaps = 41/198 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHE--FMLVDTGGVL 222
+ + +GRPNVGKS+L N ++G NR IV + G TRD + F E + ++DT G+
Sbjct: 176 KFSFIGRPNVGKSSLVNAILGENRVIVSNIEGTTRDAI-DTKFTTEDGSVYTMIDTAGIR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A AI+ S V+ +++
Sbjct: 235 KKGKVYEN-------------------TEKYSVLR--------AMQAIDRSDVVCVVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS--------LGFSPL 334
+ G+ D+ +A + + I++ VNK ++ +K + EF S L ++P+
Sbjct: 268 EEGIREQDKHVAGYAHD--AGRGIVIVVNKWDTLKKDSYTMKEFESHIRNEFQYLSYAPI 325
Query: 335 P-ISAISGTGTGELLDLV 351
+SA + EL L+
Sbjct: 326 VFVSAKTHQRLNELPKLI 343
>gi|329770413|ref|ZP_08261795.1| GTP-binding protein engA [Gemella sanguinis M325]
gi|328836536|gb|EGF86196.1| GTP-binding protein engA [Gemella sanguinis M325]
Length = 435
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 111/197 (56%), Gaps = 34/197 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAI+GRPNVGKS +FN+++G +IV D GVTRDR+Y ++ W + F ++DTGG
Sbjct: 4 PTVAIIGRPNVGKSTIFNKIIGDRLSIVEDVAGVTRDRIYSKAEWLNYSFFMIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I +E P + I QA AI+E+ VIIFL +G+
Sbjct: 61 -----------------IELEDTPFQKQ----------IRAQAELAIDEADVIIFLTNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T+ DEE+A L K DK ++LAVNK ++ M + +F+SLGF P PIS G
Sbjct: 94 DGVTSDDEEVAKLLYKT--DKPVVLAVNKIDNFDMNHM-IYDFYSLGFGDPFPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVE 359
G G+LLD VC K +E
Sbjct: 151 GIGDLLDEVCKNFKVLE 167
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 77/162 (47%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R +++GRPNVGKS+L N ++G R I + G TRD + + E++++DT G+
Sbjct: 176 RFSLIGRPNVGKSSLINTILGKERVIASEIAGTTRDAIDTDFKYNGDEYVVIDTAGIRKR 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K N + +V R + AIE S V++ +++ +
Sbjct: 236 GKVYEN-------------------CEKYSVLR--------SLKAIERSDVVLVVLNAEE 268
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+++A + ++ K +I+ VNK ++ K + EF
Sbjct: 269 GIIEQDKKVAGYAHES--GKGVIIVVNKWDAIAKDDKTMKEF 308
>gi|365853597|ref|ZP_09393864.1| ribosome biogenesis GTPase Der [Lactobacillus parafarraginis F0439]
gi|363712222|gb|EHL95921.1| ribosome biogenesis GTPase Der [Lactobacillus parafarraginis F0439]
Length = 443
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/194 (39%), Positives = 111/194 (57%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
+P VA +GRPNVGKS +FNR+ G +IV D PGVTRDR+Y W HEF ++DTGG
Sbjct: 11 IPTVAFIGRPNVGKSTIFNRIAGDRISIVEDTPGVTRDRIYTHGEWLTHEFAMIDTGG-- 68
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I + P +T+ I+ QA AIEE+ VI+F+V
Sbjct: 69 ------------------IQINDAPFSTQ----------IKNQAEIAIEEADVIVFVVSA 100
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ GLT DE++A L ++ DK +++AVNK ++P + + +F++LGF P+PIS + G
Sbjct: 101 KEGLTNDDEQVAKILYRS--DKPVVVAVNKADNP-EAREDIYDFYALGFGDPMPISGVHG 157
Query: 342 TGTGELLDLVCSEL 355
TG G+LLD +
Sbjct: 158 TGLGDLLDKIVENF 171
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 85/178 (47%), Gaps = 37/178 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R +I+GRPNVGKS+L N L+G +R IV D G TRD + R +F +VDT G+
Sbjct: 184 RFSIIGRPNVGKSSLVNALLGEDRVIVSDIAGTTRDAIDTRFEADGIKFTMVDTAGIRKR 243
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K N T +V R A AI++S VI+F+++ +
Sbjct: 244 GKVYEN-------------------TERYSVMR--------AMKAIDQSDVILFVMNAEE 276
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKG--------IMQVSEFWSLGFSPL 334
G+ D+++A + + K II VNK ++ +K + +EF + +SP+
Sbjct: 277 GIREQDKKVAGYAHE--AGKAIITVVNKWDTLKKTNHTQQDFETLIGNEFQYMTYSPI 332
>gi|345021419|ref|ZP_08785032.1| GTP-binding protein Der [Ornithinibacillus scapharcae TW25]
Length = 436
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/195 (43%), Positives = 113/195 (57%), Gaps = 34/195 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS +FNRLVG +IV D PGVTRDR+Y ++ W F L+DTGG+
Sbjct: 6 VAIVGRPNVGKSTIFNRLVGERISIVEDIPGVTRDRIYSQAEWLNTNFNLIDTGGI---- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
IG E + + R+ QA AI+E+ VIIF+V+ + G
Sbjct: 62 --------------EIGDEPLLIQMRQ------------QAEIAIDEADVIIFIVNAKEG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+TAADEE+A L K+ K ++LAVNK ++P ++ E++SLGF P PIS G G
Sbjct: 96 ITAADEEVAKLLYKS--SKPVVLAVNKVDNPEMR-DEIYEYYSLGFGEPFPISGAHGLGL 152
Query: 345 GELLDLVCSELKKVE 359
G+LLD V + + E
Sbjct: 153 GDLLDEVVTHFPQFE 167
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 83/176 (47%), Gaps = 37/176 (21%)
Query: 167 AIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSK 226
+++GRPNVGKS+L N L+ R IV D G TRD + +++++DT G+ +
Sbjct: 179 SLIGRPNVGKSSLVNALLNEERVIVSDIEGTTRDAIDTHLNKDGQDYVIIDTAGM----R 234
Query: 227 SQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGL 286
+ + E +T + +V R A AIE S V++ L+D + G+
Sbjct: 235 KRGKVYE---------------STEKYSVLR--------ALRAIERSDVVLVLIDAETGI 271
Query: 287 TAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSE-----FWSLGFSPL 334
D++IA + + I++ VNK E+ K + + E F L ++P+
Sbjct: 272 REQDKKIAGYAHD--AGRSIVIVVNKWDAIETDEKTMKEFEEKIRAHFQFLDYAPI 325
>gi|390629413|ref|ZP_10257408.1| GTPase Der [Weissella confusa LBAE C39-2]
gi|390485317|emb|CCF29756.1| GTPase Der [Weissella confusa LBAE C39-2]
Length = 436
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/194 (43%), Positives = 108/194 (55%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
P VA+VGRPNVGKS +FNR+ G +IV D PGVTRDR+Y R+ W EF L+DTGG
Sbjct: 3 FPVVAVVGRPNVGKSTIFNRIAGDRISIVEDTPGVTRDRIYTRAEWLTREFRLIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I M P T+ I +QA AI+E+ VIIF+V
Sbjct: 61 ------------------IDMADEPFMTQ----------IVQQAEIAIDEADVIIFMVSA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q GLT ADE +A L ++ K ++LAVNK ++ ++ EF++LGF P PIS G
Sbjct: 93 QEGLTEADERVAKILYRS--KKPVVLAVNKVDNIEMR-SEIYEFYALGFGDPFPISGAHG 149
Query: 342 TGTGELLDLVCSEL 355
TG G+LLD V S
Sbjct: 150 TGLGDLLDEVVSHF 163
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 84/179 (46%), Gaps = 38/179 (21%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
R + +GRPNVGKS+L N ++G R IV D G TRD + R E EF++VDT G+
Sbjct: 176 RFSFIGRPNVGKSSLVNAILGEERVIVSDISGTTRDAIDTRFTSAEGDEFVMVDTAGIRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI++S V++ +++ +
Sbjct: 236 RGKVYEN-------------------TEKYSVMR--------AMRAIDDSNVVLMVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPL 334
G+ D+ +A + + + II+ VNK ++ K ++ EF L ++P+
Sbjct: 269 EGIREQDKHVAGYAHE--AGRAIIIVVNKWDTLEKDNHTMADFEKQIRDEFQYLSYAPI 325
>gi|347521264|ref|YP_004778835.1| GTP-binding protein [Lactococcus garvieae ATCC 49156]
gi|385832647|ref|YP_005870422.1| GTP-binding protein [Lactococcus garvieae Lg2]
gi|343179832|dbj|BAK58171.1| GTP-binding protein [Lactococcus garvieae ATCC 49156]
gi|343181800|dbj|BAK60138.1| GTP-binding protein [Lactococcus garvieae Lg2]
Length = 436
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/194 (42%), Positives = 110/194 (56%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y W +F L+DTGG
Sbjct: 3 LPTVAIVGRPNVGKSTIFNRIAGERISIVEDIPGVTRDRIYATGEWLNKKFSLIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I + P T+ I QA A+EE+ VI+ +VDG
Sbjct: 61 ------------------IELSDEPFMTQ----------IRAQAEIAMEEADVIVAVVDG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L + DK IIL VNK ++P + M++ +F+SLG P P+SA+ G
Sbjct: 93 ETGITDADEHVAQILYRT--DKPIILVVNKVDNPERR-MEIFDFYSLGLGEPYPVSAVHG 149
Query: 342 TGTGELLDLVCSEL 355
GTG++LD + L
Sbjct: 150 LGTGDVLDAIIENL 163
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 91/198 (45%), Gaps = 41/198 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
+ +++GRPNVGKS+L N ++G +R I G TRD + SF EF+++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAI-DTSFTDAEGQEFLMIDTAGMR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A AI+ S +++ +++
Sbjct: 235 KSGKIYEN-------------------TEKYSVMR--------AMRAIDRSDIVLMVINA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF-----WS---LGFSPL 334
+ G+ D IA + K I+L VNK ++ K + +F W L ++P+
Sbjct: 268 EEGIREYDMRIAGFAHD--AGKGILLVVNKWDTLEKDNYTMKKFEDDIRWKFKFLDYAPI 325
Query: 335 P-ISAISGTGTGELLDLV 351
+SA +G +L D++
Sbjct: 326 VYVSAKTGQRLHKLPDMI 343
>gi|310642585|ref|YP_003947343.1| GTP-binding protein enga [Paenibacillus polymyxa SC2]
gi|386041647|ref|YP_005960601.1| GTP-binding protein engA [Paenibacillus polymyxa M1]
gi|309247535|gb|ADO57102.1| GTP-binding protein engA [Paenibacillus polymyxa SC2]
gi|343097685|emb|CCC85894.1| GTP-binding protein engA [Paenibacillus polymyxa M1]
Length = 440
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/197 (41%), Positives = 115/197 (58%), Gaps = 33/197 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR++G +IV D+PG+TRDR+YG S W F ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIIGDRLSIVEDKPGITRDRIYGISEWNGKSFSIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I E + L + I QA AIEE+ VI+F+ D +
Sbjct: 62 ----------------EIDGEDVILKS-----------IRMQAELAIEEADVIVFMSDAK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
AG+T ADEE+A L ++ K II+AVNK ++ + + + EF+S GF P+ +S GT
Sbjct: 95 AGITQADEEVAQMLYRS--GKPIIVAVNKVDNLSRADL-IYEFYSYGFGDPIAVSGSHGT 151
Query: 343 GTGELLDLVCSELKKVE 359
G G+LLD + S L ++E
Sbjct: 152 GIGDLLDAITSNLPELE 168
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 66/132 (50%), Gaps = 27/132 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
RVA++GRPNVGKS+L N ++G R IV D G TRD + +++L+DT G+
Sbjct: 178 RVALIGRPNVGKSSLVNAILGEERVIVSDIAGTTRDAIDTPFEKDGQKYVLIDTAGM--- 234
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E T + +V R A AIE + V++ +++G+
Sbjct: 235 -RKRGKVYE---------------TTEKYSVMR--------AMRAIERADVVLVVINGEE 270
Query: 285 GLTAADEEIADW 296
G+ D+ IA +
Sbjct: 271 GIIEQDKHIAGY 282
>gi|421766743|ref|ZP_16203512.1| GTP-binding protein EngA [Lactococcus garvieae DCC43]
gi|407624769|gb|EKF51502.1| GTP-binding protein EngA [Lactococcus garvieae DCC43]
Length = 436
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/194 (42%), Positives = 110/194 (56%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y W +F L+DTGG
Sbjct: 3 LPTVAIVGRPNVGKSTIFNRIAGERISIVEDIPGVTRDRIYATGEWLNKKFSLIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I + P T+ I QA A+EE+ VI+ +VDG
Sbjct: 61 ------------------IELSDEPFMTQ----------IRAQAEIAMEEADVIVAVVDG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L + DK IIL VNK ++P + M++ +F+SLG P P+SA+ G
Sbjct: 93 ETGITDADENVAQILYRT--DKPIILVVNKVDNPERR-MEIFDFYSLGLGEPYPVSAVHG 149
Query: 342 TGTGELLDLVCSEL 355
GTG++LD + L
Sbjct: 150 LGTGDVLDAIIENL 163
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 91/198 (45%), Gaps = 41/198 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
+ +++GRPNVGKS+L N ++G +R I G TRD + SF EF+++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAI-DTSFTDAEGQEFLMIDTAGMR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A AI+ S +++ +++
Sbjct: 235 KSGKIYEN-------------------TEKYSVMR--------AMRAIDRSDIVLMVINA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF-----WS---LGFSPL 334
+ G+ D IA + K I+L VNK ++ K + +F W L ++P+
Sbjct: 268 EEGIREYDMRIAGFAHD--AGKGILLVVNKWDTLEKDNYTMKKFEDDIRWKFKFLDYAPI 325
Query: 335 P-ISAISGTGTGELLDLV 351
+SA +G +L D++
Sbjct: 326 VYVSAKTGQRLHKLPDMI 343
>gi|329766866|ref|ZP_08258394.1| GTP-binding protein engA [Gemella haemolysans M341]
gi|328837591|gb|EGF87216.1| GTP-binding protein engA [Gemella haemolysans M341]
Length = 435
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 111/197 (56%), Gaps = 34/197 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAI+GRPNVGKS +FN+++G +IV D GVTRDR+Y ++ W + F ++DTGG
Sbjct: 4 PTVAIIGRPNVGKSTIFNKIIGDRLSIVEDVAGVTRDRIYSKAEWLNYSFFMIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I +E P + I QA AI+E+ VIIFL +G+
Sbjct: 61 -----------------IELEDTPFQKQ----------IRAQAELAIDEADVIIFLTNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T+ DEE+A L K DK ++LAVNK ++ M + +F+SLGF P PIS G
Sbjct: 94 DGVTSDDEEVAKLLYKT--DKPVVLAVNKIDNFDMNHM-IYDFYSLGFGDPFPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVE 359
G G+LLD VC K +E
Sbjct: 151 GIGDLLDEVCKNFKVLE 167
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 79/162 (48%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R +++GRPNVGKS+L N ++G R I D G TRD + E++++DT G+
Sbjct: 176 RFSLIGRPNVGKSSLINTILGEERVIASDIAGTTRDAIDTDFKHNGDEYVVIDTAGI--- 232
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E + + +V R + AIE S V++ +++ +
Sbjct: 233 -RKRGKVYE---------------SCEKYSVLR--------SLKAIERSDVVLVVLNAEE 268
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+++A + ++ K +I+ VNK ++ K + EF
Sbjct: 269 GIIEQDKKVAGYAHES--GKGVIIVVNKWDAIEKDDKTMKEF 308
>gi|312622952|ref|YP_004024565.1| ribosome-associated GTPase enga [Caldicellulosiruptor
kronotskyensis 2002]
gi|312203419|gb|ADQ46746.1| ribosome-associated GTPase EngA [Caldicellulosiruptor
kronotskyensis 2002]
Length = 440
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/195 (43%), Positives = 112/195 (57%), Gaps = 33/195 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNRL+G RAIV D PG+TRDR+ G + W F ++DTGG+
Sbjct: 3 PTVAIVGRPNVGKSTLFNRLIGERRAIVDDTPGITRDRIIGETEWRGITFNVIDTGGIEP 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
S ED+ + + RQA AI+ S VIIF+VDG+
Sbjct: 63 YS-------EDIIL----------------------KQMRRQAQFAIDMSDVIIFMVDGK 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT AD E+A+ LR + K I+LAVNK ++ + M + EF+ LG S P+ +SA G
Sbjct: 94 TGLTDADREVANMLRAS--KKPIVLAVNKIDNISQQAM-IYEFYELGLSDPIAMSAEHGA 150
Query: 343 GTGELLDLVCSELKK 357
G G++LD V + K
Sbjct: 151 GVGDVLDAVVNYFNK 165
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 89/205 (43%), Gaps = 54/205 (26%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VAI+G+PN GKS+L N ++G R IV D PG TRD
Sbjct: 177 KVAIIGKPNTGKSSLVNYILGEERVIVSDIPGTTRD------------------------ 212
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMI----ER----QATAAIEESCVI 276
AI +T EGIP+ + A R S I ER + AIE S +
Sbjct: 213 -----------AIDSTFEFEGIPITLIDTAGLRRKSKIYDNVERYSMLRTLQAIERSDIC 261
Query: 277 IFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-------- 328
I L+DG ++ D ++A + + K I+AVNK ++ K EF
Sbjct: 262 IILLDGTENVSEQDAKVAGYAYE--AGKGCIVAVNKWDAVEKDEKTADEFKKQIEEKLSF 319
Query: 329 LGFSP-LPISAISGTGTGELLDLVC 352
L F+P L ISA +G +LL+ V
Sbjct: 320 LKFAPVLFISAKTGFRVKKLLETVL 344
>gi|406670707|ref|ZP_11077952.1| ribosome-associated GTPase EngA [Facklamia hominis CCUG 36813]
gi|405582223|gb|EKB56229.1| ribosome-associated GTPase EngA [Facklamia hominis CCUG 36813]
Length = 444
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 107/188 (56%), Gaps = 34/188 (18%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNRL+G +IV D GVTRDR+Y W EF L+DTGG+
Sbjct: 10 LPVVAIVGRPNVGKSTLFNRLIGERISIVADYEGVTRDRIYATGSWLGREFRLIDTGGIE 69
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
V + PL + + QA A EE+ VIIF+
Sbjct: 70 MVDE--------------------PLMNQ----------VRYQAEIATEEADVIIFVTSA 99
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G+T DE IA +L ++ +K +ILAVNK ++P + QV EF++LG P PIS+ G
Sbjct: 100 QEGMTDTDEAIAHFLHRS--NKPVILAVNKADNPEQR-AQVYEFYALGHGDPYPISSSHG 156
Query: 342 TGTGELLD 349
TGTG+LLD
Sbjct: 157 TGTGDLLD 164
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 94/201 (46%), Gaps = 37/201 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRM--YGRSFWGEHEFMLVDTGGVL 222
+ + +GRPNVGKS+L N ++ R IV + G TR+ + + S G+ F ++DT G+
Sbjct: 184 KFSFIGRPNVGKSSLVNAMLKEERVIVSNMEGTTREAVDTHFVSKTGQ-SFTMIDTAGIR 242
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A +AI+ S ++ ++D
Sbjct: 243 KRGKVYEN-------------------TEKYSVMR--------ALSAIDRSDIVCLVLDA 275
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKG---IMQVSEFWSLGFSPLPISAI 339
+ G+ D+++A + + +K II+ VNK ++ K + +E F LP + I
Sbjct: 276 ETGIIEQDKKVAGYAYE--ANKGIIILVNKWDAVDKSDNLFQEFTEKIRQEFQYLPFAPI 333
Query: 340 --SGTGTGELLDLVCSELKKV 358
TG+ LD + + ++++
Sbjct: 334 IFVSAKTGQRLDRLPAMIEEI 354
>gi|357010270|ref|ZP_09075269.1| GTP-binding protein Der [Paenibacillus elgii B69]
Length = 440
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 114/193 (59%), Gaps = 33/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR++G AIV D+PGVTRDR+YGR W + EF ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTVFNRIIGDKLAIVEDKPGVTRDRLYGRGEWLDTEFSVIDTGGIEI 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ Q IM+ + + QA AIEE+ VI+F+VD +
Sbjct: 64 DGEDQ--IMKSVRV---------------------------QAELAIEEADVIVFMVDAK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP-LPISAISGT 342
AG+T AD E+A+ L + K +I+AVNK ++ ++ I + EF+SLGF + IS GT
Sbjct: 95 AGITPADSEVAEMLFR--AKKPVIIAVNKVDNLKR-IDDIYEFYSLGFGDVVGISGSHGT 151
Query: 343 GTGELLDLVCSEL 355
G G+LLD V
Sbjct: 152 GIGDLLDEVIKHF 164
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 73/150 (48%), Gaps = 29/150 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VA++GRPNVGKS+L N ++G R IV + G TRD + +++++DT G+
Sbjct: 178 KVALIGRPNVGKSSLVNAILGEERVIVSNVAGTTRDAIDTPFEKDGQKYVIIDTAGM--- 234
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E T + +V R A AIE + V++ ++DG+
Sbjct: 235 -RKRGKVYE---------------TTEKYSVMR--------AMKAIERADVVLVVIDGEE 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCE 314
G+ D+ +A + + K I VNK +
Sbjct: 271 GIIEQDKHVAGYAHE--AGKAAIFVVNKWD 298
>gi|241889489|ref|ZP_04776788.1| ribosome-associated GTPase EngA [Gemella haemolysans ATCC 10379]
gi|241863796|gb|EER68179.1| ribosome-associated GTPase EngA [Gemella haemolysans ATCC 10379]
Length = 435
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 111/197 (56%), Gaps = 34/197 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAI+GRPNVGKS +FN+++G +IV D GVTRDR+Y ++ W + F ++DTGG
Sbjct: 4 PTVAIIGRPNVGKSTIFNKIIGDRLSIVEDVAGVTRDRIYSKAEWLNYSFFMIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I +E P + I QA AI+E+ VIIFL +G+
Sbjct: 61 -----------------IELEDTPFQKQ----------IRAQAELAIDEADVIIFLTNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T+ DEE+A L K DK ++LAVNK ++ M + +F+SLGF P PIS G
Sbjct: 94 DGVTSDDEEVARLLYKT--DKPVVLAVNKIDNFDMNHM-IYDFYSLGFGDPFPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVE 359
G G+LLD VC K +E
Sbjct: 151 GIGDLLDEVCKNFKVLE 167
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 79/162 (48%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R +++GRPNVGKS+L N ++G R I D G TRD + E++++DT G+
Sbjct: 176 RFSLIGRPNVGKSSLINTILGEERVIASDIAGTTRDAIDTDFKHNGDEYVVIDTAGI--- 232
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E + + +V R + AIE S V++ +++ +
Sbjct: 233 -RKRGKVYE---------------SCEKYSVLR--------SLKAIERSDVVLVVLNAEE 268
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+++A + ++ K +I+ VNK ++ K + EF
Sbjct: 269 GIIEQDKKVAGYAHES--GKGVIIVVNKWDAIAKDDKTMKEF 308
>gi|392374271|ref|YP_003206104.1| GTP-binding protein engA [Candidatus Methylomirabilis oxyfera]
gi|258591964|emb|CBE68269.1| GTP-binding protein engA [Candidatus Methylomirabilis oxyfera]
Length = 439
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/198 (41%), Positives = 109/198 (55%), Gaps = 32/198 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP V IVGRPNVGKS LFNRLVGG RAIV D+PGVTRDR+Y W F L DTGG+
Sbjct: 3 LPIVTIVGRPNVGKSTLFNRLVGGRRAIVHDQPGVTRDRLYATVEWKGRAFTLGDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+P + LA + + Q A++ES ++IF+VD
Sbjct: 62 -----EPGVGTGLA-----------------------AQVLAQVRQAVQESVLVIFVVDA 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISG 341
+ GLT DEEIA LR + + I++A NK + P ++ SEF+ +GF+ + P+SA G
Sbjct: 94 REGLTPLDEEIARLLRHDVQTR-IVVAPNKVDRPTHEVL-ASEFFRIGFAEVCPVSAEHG 151
Query: 342 TGTGELLDLVCSELKKVE 359
G EL D++ L E
Sbjct: 152 LGVAELCDVIAEALPVTE 169
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 93/198 (46%), Gaps = 38/198 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
RV +VGRPNVGKS+L N L+G R IV ++ G TRD + + + ++L+DT G+ +
Sbjct: 178 RVTVVGRPNVGKSSLVNALLGQERVIVSEQAGTTRDAIDTPFTYNDTAYILIDTAGLRSR 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK Q +E ++ +A AIE S V + LVD +
Sbjct: 238 SKVQ-QPLERFSVV--------------------------RALKAIERSDVALILVDAKD 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFW--------SLGFSPLP- 335
G+T D +IA +++ + I+ NK + G +F + ++P+
Sbjct: 271 GITDQDAKIAAYVQD--VGSGAIVVANKWDLMPSGADARQQFTLEIRDRLRHVDYAPIAF 328
Query: 336 ISAISGTGTGELLDLVCS 353
+SA++G+ L LV S
Sbjct: 329 VSALTGSDVPTLFPLVQS 346
>gi|153953981|ref|YP_001394746.1| GTP-binding protein EngA [Clostridium kluyveri DSM 555]
gi|219854595|ref|YP_002471717.1| hypothetical protein CKR_1252 [Clostridium kluyveri NBRC 12016]
gi|189037142|sp|A5N7W7.1|DER_CLOK5 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|254783148|sp|B9E1C8.1|DER_CLOK1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|146346862|gb|EDK33398.1| Hypothetical protein CKL_1356 [Clostridium kluyveri DSM 555]
gi|219568319|dbj|BAH06303.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 438
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/194 (41%), Positives = 113/194 (58%), Gaps = 33/194 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L G +IV D PGVTRDR+Y ++ W + F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAGKRISIVEDTPGVTRDRVYAQAEWLNYNFTIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P + +++M RQA AIE + VIIF+VDG+
Sbjct: 62 ----EPE-------------------NNDVIISKM----RRQAQVAIETANVIIFIVDGR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLTAAD+E+A LRK+ K I+L VNK ++ ++ + EF++LG P+ ISA G
Sbjct: 95 EGLTAADKEVAQMLRKS--KKPIVLVVNKIDNMKQE-NYIYEFYNLGIGEPISISASQGL 151
Query: 343 GTGELLDLVCSELK 356
G G++LD + K
Sbjct: 152 GLGDMLDKLVENFK 165
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 45/208 (21%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++A +G+PNVGKS+L N+L+G R IV D PG TRD + E +F+L+DT GV
Sbjct: 178 KIAFIGKPNVGKSSLINKLLGEERVIVSDIPGTTRDAIDSYLETDEGKFLLIDTAGVRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK + I + I T A+E + V I ++D
Sbjct: 238 SKVKEEIEKYSVIRT---------------------------YTAVERADVCILMLDATH 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS--------LGFSP-LP 335
++ DE+I + + ++K I++ +NK + K V+++ + + ++P L
Sbjct: 271 DISEQDEKIIGYAHE--LNKAIMVVINKWDLVDKDTKTVNKYKTSIGSSLSFMSYAPYLF 328
Query: 336 ISAISGTGTGELLDLV-------CSELK 356
ISA +G + +V C ++K
Sbjct: 329 ISAKTGQRVNRIFKMVRECYDNYCKQIK 356
>gi|408356596|ref|YP_006845127.1| GTP-binding protein EngA [Amphibacillus xylanus NBRC 15112]
gi|407727367|dbj|BAM47365.1| GTP-binding protein EngA [Amphibacillus xylanus NBRC 15112]
Length = 436
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/193 (44%), Positives = 112/193 (58%), Gaps = 34/193 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS +FNRLVG +IV D PGVTRDR+Y + W +EF L+DTGG+
Sbjct: 6 VAIVGRPNVGKSTIFNRLVGERISIVDDIPGVTRDRIYSKVEWLSNEFHLIDTGGI---- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+G E + + RE QA AI E+ VIIF+V+ + G
Sbjct: 62 --------------ELGDEPLLVQMRE------------QADIAINEADVIIFMVNVREG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+TAADEE+A L K+ +K ++LAVNK ++P ++ EF+SLGF P PIS G G
Sbjct: 96 ITAADEEVAKILYKS--NKPVVLAVNKVDNPEMR-EEIYEFYSLGFGEPYPISGSHGLGL 152
Query: 345 GELLDLVCSELKK 357
G+LLD V K
Sbjct: 153 GDLLDRVVELFPK 165
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 72/148 (48%), Gaps = 29/148 (19%)
Query: 168 IVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSKS 227
++GRPNVGKS+L N L+ +R IV + G TRD + + +++++DT G+ +
Sbjct: 180 VIGRPNVGKSSLVNALLQQDRVIVSNIAGTTRDAVDSPFVYDGDDYVIIDTAGM----RK 235
Query: 228 QPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGLT 287
+ I E +T + ++ R A AI+ S V++ ++D + G+
Sbjct: 236 RGKIYE---------------STEKYSLLR--------AMKAIDRSDVVLIVIDAETGIL 272
Query: 288 AADEEIADWLRKNYMDKFIILAVNKCES 315
D+ I + K I++ VNK ++
Sbjct: 273 EQDKRIVGHAHE--AGKAIVIVVNKWDT 298
>gi|420143869|ref|ZP_14651357.1| GTPase Der [Lactococcus garvieae IPLA 31405]
gi|391855321|gb|EIT65870.1| GTPase Der [Lactococcus garvieae IPLA 31405]
Length = 436
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/194 (41%), Positives = 110/194 (56%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y W +F L+DTGG
Sbjct: 3 LPTVAIVGRPNVGKSTIFNRIAGERISIVEDIPGVTRDRIYATGEWLNKKFSLIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I + P T+ I QA A+EE+ VI+ +VDG
Sbjct: 61 ------------------IELSDEPFMTQ----------IRAQAEIAMEEADVIVAVVDG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L + DK +IL VNK ++P + M++ +F+SLG P P+SA+ G
Sbjct: 93 ETGITDADEHVAQILYRT--DKPVILVVNKVDNPERR-MEIFDFYSLGLGEPYPVSAVHG 149
Query: 342 TGTGELLDLVCSEL 355
GTG++LD + L
Sbjct: 150 LGTGDVLDAIIENL 163
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 91/198 (45%), Gaps = 41/198 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
+ +++GRPNVGKS+L N ++G +R I G TRD + SF EF+++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAI-DTSFTDAEGQEFLMIDTAGMR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A AI+ S +++ +++
Sbjct: 235 KSGKIYEN-------------------TEKYSVMR--------AMRAIDRSDIVLMVINA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF-----WS---LGFSPL 334
+ G+ D IA + K I+L VNK ++ K + +F W L ++P+
Sbjct: 268 EEGIREYDMRIAGFAHD--AGKGILLVVNKWDTLEKDNYTMKKFEDDIRWKFKFLDYAPI 325
Query: 335 P-ISAISGTGTGELLDLV 351
+SA +G +L D++
Sbjct: 326 VYVSAKTGQRLHKLPDMI 343
>gi|332637852|ref|ZP_08416715.1| GTP-binding protein Der [Weissella cibaria KACC 11862]
Length = 436
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/194 (42%), Positives = 108/194 (55%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
P VA+VGRPNVGKS +FNR+ G +IV D PGVTRDR+Y R+ W EF L+DTGG
Sbjct: 3 FPVVAVVGRPNVGKSTIFNRIAGDRISIVEDTPGVTRDRIYTRAEWLTREFRLIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I M P T+ I +QA AI+E+ VI+F+V
Sbjct: 61 ------------------IDMADEPFMTQ----------IVQQAEIAIDEADVIVFMVSA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q GLT ADE +A L ++ K ++LAVNK ++ ++ EF++LGF P PIS G
Sbjct: 93 QEGLTEADERVAKILYRS--KKPVVLAVNKVDNIEMR-SEIYEFYALGFGDPFPISGSHG 149
Query: 342 TGTGELLDLVCSEL 355
TG G+LLD V S
Sbjct: 150 TGLGDLLDQVVSHF 163
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 87/179 (48%), Gaps = 38/179 (21%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
R + +GRPNVGKS+L N ++G R IV D G TRD + R + EF++VDT G+
Sbjct: 176 RFSFIGRPNVGKSSLVNAILGEERVIVSDISGTTRDAIDTRFTSADGDEFVMVDTAGI-- 233
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ + + E +T + +V R A AI++S V++ +++ +
Sbjct: 234 --RKRGKVYE---------------STEKYSVMR--------AMRAIDDSNVVLMVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPL 334
G+ D+ +A + + + II+ VNK ++ K +S EF L ++P+
Sbjct: 269 EGIREQDKHVAGYAHE--AGRAIIIVVNKWDTLEKDNHTMSDFENQIRDEFQYLSYAPI 325
>gi|354582633|ref|ZP_09001534.1| ribosome-associated GTPase EngA [Paenibacillus lactis 154]
gi|353198925|gb|EHB64391.1| ribosome-associated GTPase EngA [Paenibacillus lactis 154]
Length = 440
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/193 (43%), Positives = 112/193 (58%), Gaps = 33/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNRL+G AIV D+PG+TRDR+YG + W F ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRLIGDRLAIVEDKPGITRDRIYGSAEWNGKAFSVIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I D I +I M QA AIEE+ VIIF+ D +
Sbjct: 62 ------EIDGDDMILKSIRM---------------------QAELAIEEADVIIFMCDAK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T +DEE+A L ++ K +ILAVNK ++ ++ + EF+SLGF P+ IS GT
Sbjct: 95 TGVTQSDEEVAQILFRS--GKPVILAVNKVDNLKRA-EDIYEFYSLGFGDPVGISGSHGT 151
Query: 343 GTGELLDLVCSEL 355
G G+LLD+V L
Sbjct: 152 GIGDLLDVVVENL 164
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
RVA++GRPNVGKS+L N ++G R IV D G TRD + ++L+DT G+
Sbjct: 178 RVALIGRPNVGKSSLVNAILGEERVIVSDIAGTTRDAIDTPFEKDGQRYVLIDTAGM--- 234
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E T + +V R A AIE + V++ L++G+
Sbjct: 235 -RKRGKVYE---------------TTEKYSVMR--------AMRAIERADVVLVLINGEE 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ IA + + K + VNK + K + +F
Sbjct: 271 GIIEQDKHIAGYAYE--AGKASLFVVNKWDVVEKDDKTMQQF 310
>gi|392425150|ref|YP_006466144.1| ribosome-associated GTPase EngA [Desulfosporosinus acidiphilus SJ4]
gi|391355113|gb|AFM40812.1| ribosome-associated GTPase EngA [Desulfosporosinus acidiphilus SJ4]
Length = 443
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 111/193 (57%), Gaps = 31/193 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNR+ GG AIV ++PGVTRDR+Y + W +F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTLFNRIAGGLVAIVENKPGVTRDRLYRDAEWLGRKFALIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
EG P+A + + RQA A+EE+ V+IF+VD Q
Sbjct: 62 ----------------EFKAEGTPIA----------AQMRRQAEIAMEEADVVIFVVDAQ 95
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
T D+ IA LR++ K ++LA NK E+ K Q+ +F +LG P+PISA+ G
Sbjct: 96 LAPTPDDDLIARTLRRS--GKPVLLAANKVENFEKAEGQLYDFLTLGLGEPIPISAVHGM 153
Query: 343 GTGELLDLVCSEL 355
G+LLD+V S L
Sbjct: 154 NMGDLLDMVVSNL 166
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 97/196 (49%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R++++GRPNVGKS+L N ++G R IV + PG TRD + + ++L+DT G+
Sbjct: 180 RISVIGRPNVGKSSLVNTMLGKERVIVSNIPGTTRDAIDTPFEFEGKNYILIDTAGMRRK 239
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ +E+L T + +V R + A++ S VI+ L+D
Sbjct: 240 GR-----IEEL--------------TEQYSVVR--------SLHAVDRSDVILMLLDATE 272
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS--------LGFSP-LP 335
G+T D++IA + K I++ VNK + K +++F L ++P +
Sbjct: 273 GVTEQDKKIAGYAHD--AGKAIVIVVNKWDLVEKDEKTINKFEKTIREELGFLQYAPTMF 330
Query: 336 ISAISGTGTGELLDLV 351
ISA +G ++L+LV
Sbjct: 331 ISAKTGQRVHKILELV 346
>gi|291543597|emb|CBL16706.1| ribosome-associated GTPase EngA [Ruminococcus champanellensis
18P13]
Length = 442
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 115/194 (59%), Gaps = 32/194 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA+VGRPNVGKS LFN+L+G +IV D PGVTRDR+Y + W EFM+VDTGG+
Sbjct: 3 LPIVAVVGRPNVGKSTLFNKLIGQRLSIVEDTPGVTRDRIYSKCEWRGREFMVVDTGGI- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+P+ T + +A+M RQA AI + VI+ + D
Sbjct: 62 -----EPD-------------------TDDVILAQM----RRQAEVAIHRADVIVLVTDV 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+TA D +AD L+K+ K ++LAVNKC++ + +++ EF++LG P PIS+ G
Sbjct: 94 RCGVTANDYAVADMLQKS--GKPVVLAVNKCDTIGEPPLELYEFYNLGIGEPFPISSQHG 151
Query: 342 TGTGELLDLVCSEL 355
GTG++LD + L
Sbjct: 152 HGTGDMLDEILKYL 165
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 86/196 (43%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VA++G+PN GKS+L N++ G R IV D G TRD + +F+ +DT G+
Sbjct: 179 KVAVIGKPNAGKSSLINKIAGEERVIVSDIAGTTRDATDTVVENEQGKFVFIDTAGI--- 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + I E R+ +A A++ + V I ++D Q
Sbjct: 236 -RKKSRITE-----------------------RVEHFSVLRAYMAVDRADVCIIMIDAQT 271
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS--------LGFSPLP- 335
G T D ++A + + K I+AVNK + K + EF + + P
Sbjct: 272 GFTEQDSKVAGYAHEQ--GKASIIAVNKWDLIEKDTNTMKEFQEKLEKDFSFMSYVPFVF 329
Query: 336 ISAISGTGTGELLDLV 351
ISA +G +L +++
Sbjct: 330 ISAKTGQRVNKLFEMI 345
>gi|333924179|ref|YP_004497759.1| GTP-binding protein engA [Desulfotomaculum carboxydivorans
CO-1-SRB]
gi|333749740|gb|AEF94847.1| GTP-binding protein engA [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 442
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/197 (43%), Positives = 108/197 (54%), Gaps = 33/197 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNR+VG AIV D PGVTRDR+Y + W EF LVDTGG+
Sbjct: 4 PIVAIVGRPNVGKSMLFNRIVGSRIAIVEDMPGVTRDRLYQDAEWQGREFTLVDTGGL-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ ED+ + S I +QA A+ E+ IIF+VD +
Sbjct: 62 ------DFAEDV----------------------ITSQIRKQAELAMREADAIIFVVDAR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
AGLT DEE+A LR DK ++LA NK E + +F+ LG P+PISA G
Sbjct: 94 AGLTTTDEEVAKVLR--LTDKPVLLAANKVEQFDLAKIPYYDFYRLGLGDPIPISAAEGL 151
Query: 343 GTGELLDLVCSELKKVE 359
TG+LLD + L + E
Sbjct: 152 NTGDLLDELVKLLPEQE 168
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 90/196 (45%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R+A++GRPNVGKS+L N ++G R IV + PG TRD + +++VDT G+
Sbjct: 178 RIAVIGRPNVGKSSLVNAILGEERVIVSNIPGTTRDAIDSPFERNGKSYVIVDTAGMRRR 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
++ I L +V R A AI+ V + L+D
Sbjct: 238 NR-------------------IDLPAERYSVVR--------ALRAIDRCDVALMLLDATE 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS--------LGFSP-LP 335
G+T D+ I + + K IIL VNK + K +++F L ++P L
Sbjct: 271 GVTEQDKRIVGYAHEK--GKAIILVVNKWDLIEKDDKTMNKFEKKIREELSFLSYAPTLY 328
Query: 336 ISAISGTGTGELLDLV 351
ISA++ ++L++V
Sbjct: 329 ISALTKQRVPKVLEMV 344
>gi|73662580|ref|YP_301361.1| GTP-binding protein EngA [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|418576138|ref|ZP_13140284.1| GTP-binding protein EngA [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
gi|123642627|sp|Q49XS9.1|DER_STAS1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|72495095|dbj|BAE18416.1| putative GTPase [Staphylococcus saprophyticus subsp. saprophyticus
ATCC 15305]
gi|379325200|gb|EHY92332.1| GTP-binding protein EngA [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
Length = 436
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/197 (41%), Positives = 109/197 (55%), Gaps = 34/197 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y W H+F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTIFNRVVGERVSIVEDTPGVTRDRIYSSGEWLTHDFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I QA AI+E+ VIIF+V+ +
Sbjct: 62 ----------------------------EIGDAPFQTQIRAQAEVAIDEADVIIFMVNVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT +DE +A L K+ K ++LAVNK ++P ++ +F+SLGF P PIS G
Sbjct: 94 EGLTQSDEMVAQMLYKS--KKPVVLAVNKVDNPEMR-NEIYDFYSLGFGDPYPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVE 359
G G+LLD V K+ E
Sbjct: 151 GLGDLLDAVVKHFKEEE 167
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R++I+GRPNVGKS+L N ++G +R IV + G TRD + + + +++L+DT G+
Sbjct: 177 RLSIIGRPNVGKSSLVNAILGEDRVIVSNVAGTTRDAVDTEYSYDDQDYVLIDTAGMRKK 236
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K N T + +V R A AIE S VI+ ++D +
Sbjct: 237 GKVYEN-------------------TEKYSVLR--------ALKAIERSNVILIVIDAEQ 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ +A + + K I++ VNK ++ K + +F
Sbjct: 270 GIIEQDKRVAGYAHEE--GKAIVIVVNKWDTVDKETNTMKKF 309
>gi|317495375|ref|ZP_07953744.1| ribosome-associated GTPase EngA [Gemella morbillorum M424]
gi|316914434|gb|EFV35911.1| ribosome-associated GTPase EngA [Gemella morbillorum M424]
Length = 435
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 109/194 (56%), Gaps = 34/194 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAI+GRPNVGKS +FN+++G +IV D GVTRDR+Y ++ W + F ++DTGG
Sbjct: 4 PTVAIIGRPNVGKSTIFNKIIGDRLSIVEDVAGVTRDRIYSKAEWLNYSFFMIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I +E P + I QA AI+E+ VIIFL +G+
Sbjct: 61 -----------------IELEDTPFQKQ----------IRAQAELAIDEADVIIFLTNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T+ DEE+A L K DK ++LAVNK ++ M + +F+SLGF P PIS G
Sbjct: 94 DGVTSDDEEVAKLLYKT--DKPVVLAVNKIDNFDMNHM-IYDFYSLGFGDPFPISGSHGL 150
Query: 343 GTGELLDLVCSELK 356
G G+LLD VC K
Sbjct: 151 GIGDLLDEVCKNFK 164
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 79/162 (48%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R +++GRPNVGKS+L N ++G R I D G TRD + E++++DT G+
Sbjct: 176 RFSLIGRPNVGKSSLINTILGEERVIASDIAGTTRDAIDTDFKHNGDEYVVIDTAGI--- 232
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E A + +V R + AIE S V++ +++ +
Sbjct: 233 -RKRGKVYE---------------ACEKYSVLR--------SLKAIERSDVVLVVLNAEE 268
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+++A + ++ K +I+ VNK ++ K + EF
Sbjct: 269 GIIEQDKKVAGYAHES--GKGVIIVVNKWDAIAKDDKTMKEF 308
>gi|302670901|ref|YP_003830861.1| GTP-binding protein [Butyrivibrio proteoclasticus B316]
gi|302395374|gb|ADL34279.1| GTP-binding protein [Butyrivibrio proteoclasticus B316]
Length = 442
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 111/193 (57%), Gaps = 32/193 (16%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VA+VGRPNVGKS LFN L G AIV D PGVTRDR+Y W H F L+DTGG+
Sbjct: 7 VAVVGRPNVGKSTLFNALAGSRIAIVQDTPGVTRDRIYQDVEWLNHSFTLIDTGGI---- 62
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+P+ +++ +A+M QA AI+ + VIIF+VD + G
Sbjct: 63 --EPD-------------------SKDIILAQMRD----QAQIAIDTADVIIFMVDVKQG 97
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
LT +D ++AD LRK+ K I+L VNK ++ + M V EF++LG P PISA++ G
Sbjct: 98 LTDSDSKVADMLRKS--GKPIVLCVNKVDNYNRDSMDVYEFYNLGIGEPFPISAVNKQGI 155
Query: 345 GELLDLVCSELKK 357
G+LL+ V S K
Sbjct: 156 GDLLEEVVSHFSK 168
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 98/212 (46%), Gaps = 40/212 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+G+PNVGKS++ N+L+G NR IV D G TRD + + ++ +DT G+
Sbjct: 180 KIAIIGKPNVGKSSIINKLIGENRLIVSDIAGTTRDAIDTPVKYNGKKYTFIDTAGLRRK 239
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+K + +E I T+G A+E + V I +++ +
Sbjct: 240 NKIKDE-LEHYMIVRTVG--------------------------AVERADVAILVINAED 272
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFW-----SLGFSPLP---- 335
G+T D +IA ++ K +I+AVNK + K V EF +L F
Sbjct: 273 GVTEQDAKIAGIAHES--GKAVIIAVNKWDLIEKDNHSVKEFTKDIRNTLAFMNYAEIIF 330
Query: 336 ISAISGTGTGELLDLV--CSELKKVEVCIGFL 365
ISA +G +L D++ SE + V G L
Sbjct: 331 ISAETGQRLVKLYDMIDMVSENHALRVSTGVL 362
>gi|308069529|ref|YP_003871134.1| GTP-binding protein engA [Paenibacillus polymyxa E681]
gi|305858808|gb|ADM70596.1| GTP-binding protein engA [Paenibacillus polymyxa E681]
Length = 440
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 115/197 (58%), Gaps = 33/197 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR++G +IV D+PG+TRDR+YG S W F ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIIGDRLSIVEDKPGITRDRIYGISEWNGKSFSIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I E + L + I QA AIEE+ VI+F+ D +
Sbjct: 62 ----------------EIDGEDVILKS-----------IRMQAELAIEEADVIVFMSDAK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
AG+T +DEE+A L ++ K II+AVNK ++ + + + EF+S GF P+ +S GT
Sbjct: 95 AGITQSDEEVAQMLYRS--GKPIIVAVNKVDNLSRADL-IYEFYSYGFGDPIAVSGSHGT 151
Query: 343 GTGELLDLVCSELKKVE 359
G G+LLD + S L ++E
Sbjct: 152 GIGDLLDAITSNLPELE 168
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 66/132 (50%), Gaps = 27/132 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
RVA++GRPNVGKS+L N ++G R IV D G TRD + +++L+DT G+
Sbjct: 178 RVALIGRPNVGKSSLVNAILGEERVIVSDIAGTTRDAIDTPFEKDGQKYVLIDTAGM--- 234
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E T + +V R A AIE + V++ +++G+
Sbjct: 235 -RKRGKVYE---------------TTEKYSVMR--------AMRAIERADVVLVVINGEE 270
Query: 285 GLTAADEEIADW 296
G+ D+ IA +
Sbjct: 271 GIIEQDKHIAGY 282
>gi|403069993|ref|ZP_10911325.1| GTP-binding protein Der [Oceanobacillus sp. Ndiop]
Length = 436
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/191 (42%), Positives = 111/191 (58%), Gaps = 34/191 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS +FNRLVG +IV D PGVTRDR+Y + W +F L+DTGG+
Sbjct: 6 VAIVGRPNVGKSTIFNRLVGERISIVEDIPGVTRDRIYASADWLNQDFNLIDTGGI---- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
IG E + + R+ QA AI+E+ VIIF+++G+ G
Sbjct: 62 --------------EIGDEPLLVQMRQ------------QAEIAIDEADVIIFILNGKEG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+TAADEE+A L K+ +K ++LA+NK ++P + E++SLGF P PIS G G
Sbjct: 96 ITAADEEVAKLLFKS--NKSVVLAINKMDNPEMR-ETIYEYYSLGFGEPFPISGSHGLGL 152
Query: 345 GELLDLVCSEL 355
G+LLD V
Sbjct: 153 GDLLDEVVKHF 163
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 75/149 (50%), Gaps = 29/149 (19%)
Query: 167 AIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSK 226
+++GRPNVGKS+L N L+ R IV + G TRD + R + +F+++DT G+ +
Sbjct: 179 SLIGRPNVGKSSLVNALLNEERVIVSEIEGTTRDAIDTRLHKDDQDFIIIDTAGM----R 234
Query: 227 SQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGL 286
+ + E T + +V R A AIE S V++ L+D + G+
Sbjct: 235 KRGKVYE---------------TTEKYSVLR--------ALRAIERSDVVLVLIDAETGI 271
Query: 287 TAADEEIADWLRKNYMDKFIILAVNKCES 315
D++IA + + + +++ VNK ++
Sbjct: 272 REQDKKIAGYAHE--AGRAVVIVVNKWDT 298
>gi|392394322|ref|YP_006430924.1| ribosome-associated GTPase EngA [Desulfitobacterium dehalogenans
ATCC 51507]
gi|390525400|gb|AFM01131.1| ribosome-associated GTPase EngA [Desulfitobacterium dehalogenans
ATCC 51507]
Length = 441
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/193 (43%), Positives = 110/193 (56%), Gaps = 33/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNRL GG AIV + PGVTRDR+Y S W +F ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTLFNRLAGGLVAIVENRPGVTRDRLYRDSEWLGRKFTIIDTGGIEF 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
V+++ P + S + RQA AIEES VI+F++D Q
Sbjct: 64 VNENTP----------------------------ITSQMRRQAEIAIEESDVIVFVIDAQ 95
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
T D+ IA LR++ K +ILA NK E+ K ++ EF++LG P+PISA+ G
Sbjct: 96 ISPTPDDDMIAQTLRRS--GKPVILAANKVENFSK--TELYEFYNLGLGEPIPISAVHGM 151
Query: 343 GTGELLDLVCSEL 355
G+LLD V S
Sbjct: 152 NIGDLLDEVISHF 164
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 98/196 (50%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R+A++GRPNVGKS+L N L+G R IV + PG TRD + ++++DT G+
Sbjct: 178 RIAVIGRPNVGKSSLVNTLLGEERVIVSNIPGTTRDAIDSAFEHDGKHYIIIDTAGMRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ +E+L T + +V+R + A++ S VI+ L+D
Sbjct: 238 GR-----IEEL--------------TEQYSVSR--------SLRAVDRSDVILMLIDAGE 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----LGF---SP-LP 335
G+T D++IA + + K I+L VNK + K ++ F LGF +P L
Sbjct: 271 GVTEQDKKIAGYAHE--AGKGIVLVVNKWDLIEKDDKTMNRFEKDIREELGFMQYAPTLF 328
Query: 336 ISAISGTGTGELLDLV 351
ISA +G +LL+LV
Sbjct: 329 ISAKTGQRVAKLLELV 344
>gi|414154804|ref|ZP_11411121.1| GTPase involved in ribosome synthesis and maintenance
[Desulfotomaculum hydrothermale Lam5 = DSM 18033]
gi|411453635|emb|CCO09025.1| GTPase involved in ribosome synthesis and maintenance
[Desulfotomaculum hydrothermale Lam5 = DSM 18033]
Length = 438
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/193 (43%), Positives = 109/193 (56%), Gaps = 35/193 (18%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNR+VG AIV D PGVTRDR+Y + W EF LVDTGG+
Sbjct: 4 PVVAIVGRPNVGKSTLFNRIVGARIAIVEDMPGVTRDRLYQDAEWRGQEFTLVDTGGL-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ ED+ + S I +QA AI+E+ ++F+VD +
Sbjct: 62 ------DFAEDV----------------------ITSQIRKQAELAIKEADAVLFVVDAR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TA DEE+A LRK DK ++L NK E K + EF+ LG P+P+SA G
Sbjct: 94 EGVTALDEEVARSLRKT--DKPVLLVANKVEQFDK--IPYYEFYQLGLGEPIPVSAAEGL 149
Query: 343 GTGELLDLVCSEL 355
TG+LLD + + L
Sbjct: 150 NTGDLLDELVALL 162
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 90/196 (45%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R+A++GRPNVGKS+L N ++G R IV + PG TRD + ++++DT G+
Sbjct: 176 RIAVIGRPNVGKSSLVNAILGEERVIVSNIPGTTRDAIDTPFERNGKNYVIIDTAGMRRR 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
++ I L +V R A AI+ V++ ++D
Sbjct: 236 NR-------------------IDLPAERYSVVR--------ALRAIDRCDVVLMVIDATE 268
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS--------LGFSP-LP 335
G+ D++I + + K I+L VNK + K +++F L ++P L
Sbjct: 269 GVAEQDKKIVGYAHEK--GKAIVLTVNKWDLIEKDDKTMNKFDKKIREELSFLDYAPTLY 326
Query: 336 ISAISGTGTGELLDLV 351
ISA++ ++L+ V
Sbjct: 327 ISALTKQRLPKVLETV 342
>gi|323703070|ref|ZP_08114725.1| ribosome-associated GTPase EngA [Desulfotomaculum nigrificans DSM
574]
gi|323531964|gb|EGB21848.1| ribosome-associated GTPase EngA [Desulfotomaculum nigrificans DSM
574]
Length = 442
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/197 (43%), Positives = 108/197 (54%), Gaps = 33/197 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNR+VG AIV D PGVTRDR+Y + W EF LVDTGG+
Sbjct: 4 PIVAIVGRPNVGKSMLFNRIVGSRIAIVEDMPGVTRDRLYQDAEWQGREFTLVDTGGL-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ ED+ + S I +QA A+ E+ +IF+VD +
Sbjct: 62 ------DFAEDV----------------------ITSQIRKQAELAMREADAVIFVVDAR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
AGLT DEE+A LR DK ++LA NK E + +F+ LG P+PISA G
Sbjct: 94 AGLTTTDEEVAKVLR--LTDKPVLLAANKVEQFDLAKIPYYDFYRLGLGDPIPISAAEGL 151
Query: 343 GTGELLDLVCSELKKVE 359
TG+LLD + L + E
Sbjct: 152 NTGDLLDELVKLLPEQE 168
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 90/196 (45%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R+A++GRPNVGKS+L N ++G R IV + PG TRD + +++VDT G+
Sbjct: 178 RIAVIGRPNVGKSSLVNAILGEERVIVSNIPGTTRDAIDSPFERNGKSYVIVDTAGMRRR 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
++ I L +V R A AI+ V + L+D
Sbjct: 238 NR-------------------IDLPAERYSVVR--------ALRAIDRCDVALMLLDATE 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS--------LGFSP-LP 335
G+T D+ I + + K IIL VNK + K +++F L ++P L
Sbjct: 271 GVTEQDKRIVGYAHEK--GKAIILVVNKWDLIEKDDKTMNKFEKKIREELSFLSYAPTLY 328
Query: 336 ISAISGTGTGELLDLV 351
ISA++ ++L++V
Sbjct: 329 ISALTKQRVPKVLEMV 344
>gi|160331570|ref|XP_001712492.1| engA [Hemiselmis andersenii]
gi|159765940|gb|ABW98167.1| engA [Hemiselmis andersenii]
Length = 519
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/199 (41%), Positives = 113/199 (56%), Gaps = 32/199 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGG--NRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGG 220
+P VAIVGR NVGKS L NR+ G + +IV D GVTRD+ Y ++FW EH+F++ DTGG
Sbjct: 77 IPIVAIVGRGNVGKSTLVNRISGAFEDGSIVHDLEGVTRDKNYRKAFWCEHQFLVTDTGG 136
Query: 221 VLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLV 280
A E + + ++ QA AIEE+ VIIF+V
Sbjct: 137 ---------------------------FAFEENNSNKFEADVKEQALKAIEEANVIIFVV 169
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAI 339
DG+ L D E+A++L+ + ++LAVNK E+ +K + S+FWSLGF P+PISAI
Sbjct: 170 DGKCELDINDIELANYLK--FQKTPVLLAVNKSENLKKFDSEGSKFWSLGFGEPIPISAI 227
Query: 340 SGTGTGELLDLVCSELKKV 358
GT T LLD + L K+
Sbjct: 228 HGTNTDVLLDKTITHLPKI 246
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 70/154 (45%), Gaps = 43/154 (27%)
Query: 154 TIGNVPEHLLP------RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDR----MY 203
TI ++P+ P +VAI+G+PNVGKS++ N L RAIV D PG TRD +
Sbjct: 239 TITHLPKISFPFSETSIKVAIIGKPNVGKSSILNFLTNKKRAIVSDIPGTTRDSCDSFIS 298
Query: 204 GRSFWGEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPS--M 261
G S + + L+DT G+ ++ + P M
Sbjct: 299 GGS--NSNIYNLIDTAGI----------------------------RKKKMIEYGPEFFM 328
Query: 262 IERQATAAIEESCVIIFLVDGQAGLTAADEEIAD 295
I R A + CV +F++D G+T D+++++
Sbjct: 329 INRTFKAIQKCDCV-LFVIDASTGITEQDQKLSE 361
>gi|334341454|ref|YP_004546434.1| ribosome-associated GTPase EngA [Desulfotomaculum ruminis DSM 2154]
gi|334092808|gb|AEG61148.1| ribosome-associated GTPase EngA [Desulfotomaculum ruminis DSM 2154]
Length = 440
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 110/193 (56%), Gaps = 33/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS+LFNR+VG AIV D PGVTRDR+Y + W EF LVDTGG+
Sbjct: 4 PIVAIVGRPNVGKSSLFNRIVGARIAIVEDMPGVTRDRLYQDAEWQGREFTLVDTGGL-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ ED+ + + I +QA AI+E+ I+FLVD +
Sbjct: 62 ------DFAEDV----------------------ITAQIRKQAELAIKEADAILFLVDAR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT+ D+E+A LR+ DK ++L NK E + + +F+ LG P+P+SA G
Sbjct: 94 EGLTSIDQEVAGVLRRT--DKPVLLVANKVEQFDQSKISYFDFYQLGLGDPIPVSAAEGL 151
Query: 343 GTGELLDLVCSEL 355
TG+LLD + + L
Sbjct: 152 NTGDLLDQLITLL 164
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 90/196 (45%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R+A++GRPNVGKS+L N ++G R IV PG TRD + G ++++DT G+
Sbjct: 178 RIAVIGRPNVGKSSLVNAILGEERVIVSSIPGTTRDAIDTPFERGGKNYVIIDTAGMRRR 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K I L T +V R A A++ V + L+D
Sbjct: 238 KK-------------------IDLPTERYSVVR--------ALRAVDRCDVTLMLIDATE 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS--------LGFSP-LP 335
G+ D++I + + K IIL NK + K +++F L +SP L
Sbjct: 271 GVAEQDKKIVGYAHEK--GKAIILVANKWDLIEKDDKTMNKFERKFREELPFLSYSPILY 328
Query: 336 ISAISGTGTGELLDLV 351
ISA++G ++L++V
Sbjct: 329 ISALTGQRLPKVLEMV 344
>gi|116333425|ref|YP_794952.1| GTP-binding protein EngA [Lactobacillus brevis ATCC 367]
gi|122269888|sp|Q03SA1.1|DER_LACBA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|116098772|gb|ABJ63921.1| Predicted GTPase [Lactobacillus brevis ATCC 367]
Length = 435
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/195 (43%), Positives = 110/195 (56%), Gaps = 38/195 (19%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNR+ G +IV D PGVTRDR+Y R+ W EF ++DTGG
Sbjct: 4 PVVAIVGRPNVGKSTLFNRIAGERISIVEDTPGVTRDRIYSRAEWLGTEFRMIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I M P T+ I +QA AI+E+ VI+F+V
Sbjct: 61 -----------------IDMGDEPFLTQ----------ITQQAEIAIDEADVIVFIVSAP 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAIS 340
G+T ADE++A L + DK +ILAVNK ++P R+ I +F+SLGF P P+S +
Sbjct: 94 EGITDADEKVAKILYR--ADKPVILAVNKADNPEVRESIY---DFYSLGFGDPYPVSGVH 148
Query: 341 GTGTGELLDLVCSEL 355
G G G+LLD V E
Sbjct: 149 GLGLGDLLDAVVKEF 163
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 96/200 (48%), Gaps = 36/200 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R +++GRPNVGKS+L N ++G R IV + G TRD + + + +F +VDT G+
Sbjct: 176 RFSLIGRPNVGKSSLVNAMLGEERVIVSNIAGTTRDAIDTKFVADDTKFTMVDTAGIRKR 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K N T +V R A AI++S V++ +++ +
Sbjct: 236 GKVYEN-------------------TERYSVMR--------AMRAIDDSDVVLVVLNAEE 268
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSL------GFSPLPISA 338
G+ D+ +A + + + II+ VNK ++ +K +++F +L S PI
Sbjct: 269 GIREQDKRVAGYAHE--AGRGIIILVNKWDTLKKDNHTLTDFQNLIRIEFQYLSYAPIIF 326
Query: 339 ISGTGTGELLDLVCSELKKV 358
+S TG+ L+ + +K+V
Sbjct: 327 VSAK-TGQRLEQLPEMIKRV 345
>gi|168186800|ref|ZP_02621435.1| GTP-binding protein EngA [Clostridium botulinum C str. Eklund]
gi|169295122|gb|EDS77255.1| GTP-binding protein EngA [Clostridium botulinum C str. Eklund]
Length = 438
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/193 (44%), Positives = 111/193 (57%), Gaps = 33/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L G AIV D PGVTRDR+Y + W + F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAGKRIAIVDDMPGVTRDRIYAEAEWLNNNFTIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P + VA+M RQA AIE + V++F+VDG+
Sbjct: 62 ----EPE-------------------NDDIIVAQM----RRQAQLAIEMADVVLFIVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT AD E+A LRK +K I+LAVNK + R+ + EF++LG P+PISA G
Sbjct: 95 QGLTDADREVAHMLRK--ANKSIVLAVNKIDR-RQLDDNIYEFYNLGLGEPMPISASQGL 151
Query: 343 GTGELLDLVCSEL 355
G G+LLD V +
Sbjct: 152 GLGDLLDEVVGKF 164
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 91/195 (46%), Gaps = 38/195 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R+A++GRPNVGKS+L NR++G + IV + PG TRD + E +F+L+DT G+
Sbjct: 178 RIAMIGRPNVGKSSLINRILGEEKHIVSNIPGTTRDAVDSYIETEEGKFVLIDTAGLRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK + + R +AV + A+IE + V I ++D
Sbjct: 238 SKIKEQV------------------ERYSAV---------RTLASIENADVCILMIDATE 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF-----WSLGFSP----LP 335
+ DE I + + ++K I++ VNK + K + F L F P L
Sbjct: 271 DIAEQDERIIGYAHE--INKAIVVIVNKWDLIEKDDKTMKNFKDKLRTKLSFLPYASFLF 328
Query: 336 ISAISGTGTGELLDL 350
ISA +G ++L +
Sbjct: 329 ISAKTGQRVHKVLGM 343
>gi|197294798|ref|YP_001799339.1| GTP-binding protein EngA [Candidatus Phytoplasma australiense]
gi|171854125|emb|CAM12114.1| GTP-binding protein [Candidatus Phytoplasma australiense]
Length = 439
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 113/194 (58%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
+P++AIVGRPNVGKS+LFNRL+G +AI + G+TRDR+Y ++ W F ++DTGG
Sbjct: 1 MPKIAIVGRPNVGKSSLFNRLIGKRQAITHHKEGITRDRIYAQANWLTRTFDVIDTGG-- 58
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I + IP + I++QA AI+E+ VIIF+VDG
Sbjct: 59 ------------------IEFQAIPFLEQ----------IKQQAQLAIDEADVIIFVVDG 90
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISG 341
+ GLT +D +A L + K ++L VNK ++ + + EF++LGF +PLP+SA+ G
Sbjct: 91 KTGLTQSDHYLAKILYQT--KKKVLLVVNKIDN-HDLLSNIYEFYALGFDAPLPVSALHG 147
Query: 342 TGTGELLDLVCSEL 355
G G+LLD + L
Sbjct: 148 VGVGDLLDKIIFHL 161
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+ I+GRPNVGKS L N L+ R +V D G T D + ++ ++DT G+
Sbjct: 180 KFCIIGRPNVGKSTLTNSLLFSQRMVVSDIAGTTTDAIDTFFINEGQKYQIIDTAGI--- 236
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K + I E +E + + ++ Q A + +C++I D QA
Sbjct: 237 -KKRGKIYE-----------------QEDKYSVLRAL---QTLANCDIACLVI---DAQA 272
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ IA + +++ K I+ VNK + K + +F
Sbjct: 273 GILEQDKNIAGLILEHH--KSYIIIVNKWDLISKETNTMKKF 312
>gi|337747035|ref|YP_004641197.1| protein EngA [Paenibacillus mucilaginosus KNP414]
gi|336298224|gb|AEI41327.1| EngA [Paenibacillus mucilaginosus KNP414]
Length = 469
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/213 (39%), Positives = 119/213 (55%), Gaps = 37/213 (17%)
Query: 144 SGKKQKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMY 203
G+KQ++ K + P +AIVGRPNVGKS +FNR++G AIV D+PGVTRDR+Y
Sbjct: 17 GGRKQQREK----GMKRMARPVIAIVGRPNVGKSTIFNRIIGDKLAIVEDKPGVTRDRLY 72
Query: 204 GRSFWGEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIE 263
GR W + EF ++DTGG I +EG R V
Sbjct: 73 GRGEWLDQEFSIIDTGG--------------------IEIEGEDHILRSVRV-------- 104
Query: 264 RQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV 323
QA AIEE+ VIIF+VD +AG+T AD E+A L ++ K +++AVNK ++ ++ +
Sbjct: 105 -QAELAIEEADVIIFMVDAKAGVTPADSEVAQILFRS--QKPVVVAVNKVDNLQRA-DDI 160
Query: 324 SEFWSLGFSPL-PISAISGTGTGELLDLVCSEL 355
EF+S+GF + IS GTG G+LL+ V
Sbjct: 161 YEFYSMGFGEIVGISGAHGTGIGDLLEEVVKHF 193
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
RVA++GRPNVGKS+L N ++G R IV D G TRD + +++++DT G+
Sbjct: 207 RVALIGRPNVGKSSLVNAILGEERVIVSDMAGTTRDAIDTPFEKDGQKYVIIDTAGMRKR 266
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K N T + +V R A AIE + V++ ++DG+
Sbjct: 267 GKVYEN-------------------TEKYSVMR--------AMKAIERADVVLVVIDGEV 299
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ +A + + K + VNK + K + +F
Sbjct: 300 GIIEQDKHVAGYAHE--AGKAAVFVVNKWDVVEKDEKTMHQF 339
>gi|418029507|ref|ZP_12668045.1| hypothetical protein LDBUL1632_00839 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
gi|354689813|gb|EHE89786.1| hypothetical protein LDBUL1632_00839 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
Length = 435
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/211 (42%), Positives = 114/211 (54%), Gaps = 39/211 (18%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR++ AIV D PGVTRDR Y R+ W H+F ++DTGG+
Sbjct: 3 LPIVAIVGRPNVGKSTLFNRIINERVAIVEDRPGVTRDRNYARASWMGHQFSIIDTGGI- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
ED +TI E I QA AIEE+ VI+ L D
Sbjct: 62 --------TWED----STIDEE-----------------IRAQAEIAIEEADVIVMLADA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
G+T+ DE IA L + DK ++LAVNK ++P + + +F+SLG P+P+S G
Sbjct: 93 SQGVTSLDERIAHLLYR--ADKPVLLAVNKADNPEQR-TDIYDFYSLGLGDPIPVSGSHG 149
Query: 342 TGTGELLDLVCSEL-----KKVEVCIGFLLI 367
TG G+LLD V K E I F +I
Sbjct: 150 TGIGDLLDEVVKNFPADSEKTEEGVISFSVI 180
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 104/223 (46%), Gaps = 40/223 (17%)
Query: 167 AIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSK 226
+++GRPNVGKS++ NRL+G R IV +E G TRD + +F +VDT G+ K
Sbjct: 178 SVIGRPNVGKSSIVNRLLGEERVIVANEEGTTRDAIDTPFVKDGTKFRVVDTAGIRRRGK 237
Query: 227 SQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGL 286
+ T + +V R A +A+E S V I ++D G+
Sbjct: 238 -------------------VYEKTEKYSVMR--------AMSAMERSDVAILVLDASTGI 270
Query: 287 TAADEEIADWLRKNYMDKFIILAVNKCESPRK---------GIMQVSEFWSLGFSPLP-I 336
D+ +A + + + +I+AVNK + P+K +++ EF L ++P+ +
Sbjct: 271 REQDKHVAGYAHEAGLG--MIIAVNKWDLPKKDSSSGKDFEAVIR-EEFSYLDYAPIVFV 327
Query: 337 SAISGTGTGELLDLVCSELKKVEVCIGFLLICNAITKIFHIIP 379
SA +G +L +V + I ++ + + + H++P
Sbjct: 328 SAKTGKNIDQLPKMVKEVYENKNQRIQSSVLNDLLLEASHLVP 370
>gi|319946441|ref|ZP_08020678.1| ribosome-associated GTPase EngA [Streptococcus australis ATCC
700641]
gi|417919922|ref|ZP_12563443.1| ribosome-associated GTPase EngA [Streptococcus australis ATCC
700641]
gi|319747409|gb|EFV99665.1| ribosome-associated GTPase EngA [Streptococcus australis ATCC
700641]
gi|342831478|gb|EGU65794.1| ribosome-associated GTPase EngA [Streptococcus australis ATCC
700641]
Length = 436
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 110/194 (56%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W H+F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATAEWLNHQFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K +ILAVNK ++P + +F++LG PLP+S++ G
Sbjct: 93 KEGITDADEYVARMLYKTH--KPVILAVNKVDNPEMR-TDIYDFYALGLGEPLPVSSVHG 149
Query: 342 TGTGELLDLVCSEL 355
GTG++LD + L
Sbjct: 150 IGTGDVLDAIVENL 163
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 39/197 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + E E+ ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTHFTDAEGQEYTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPLP 335
G+ D+ IA + + K +I+ VNK ++ K + +F L ++P+
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGMIIVVNKWDTLEKDNHTMKQWEDDIRDQFQYLSYAPII 326
Query: 336 -ISAISGTGTGELLDLV 351
+SA++ +L D++
Sbjct: 327 FVSALTKQRLHKLPDMI 343
>gi|148656272|ref|YP_001276477.1| GTP-binding protein EngA [Roseiflexus sp. RS-1]
gi|148568382|gb|ABQ90527.1| small GTP-binding protein [Roseiflexus sp. RS-1]
Length = 493
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/199 (42%), Positives = 115/199 (57%), Gaps = 25/199 (12%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+ P VA+VGRPNVGKS LFNRL+G RAIV D PG TRDR+YG + W F +VDT G+
Sbjct: 1 MKPIVALVGRPNVGKSTLFNRLIGERRAIVEDIPGTTRDRLYGDTEWNGRVFTVVDTAGL 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
L + ED T G + +A R + QA AIEE+ IIF+VD
Sbjct: 61 L--------LDED---DLTPGTPQLEIARR----------VREQAEIAIEEADAIIFIVD 99
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
+ GLTAAD +A+ LR+ K ++LA NK ++ R+ + EF++L P+P+SA
Sbjct: 100 SREGLTAADAAVAEVLRR--ASKPVVLAANKADN-RERALDAVEFYALNLGEPIPMSAYH 156
Query: 341 GTGTGELLDLVCSELKKVE 359
G G G++LD V L +E
Sbjct: 157 GIGVGDVLDRVTDVLPIIE 175
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 72/150 (48%), Gaps = 29/150 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVGRPNVGKS+L NRL+G R++V D PG TRD + + +L+DT G+
Sbjct: 184 KIAIVGRPNVGKSSLLNRLIGQERSVVSDVPGTTRDSIDTPVEIDGIKALLIDTAGIRRR 243
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K E + R M +A AIE + V + L+D
Sbjct: 244 GKI------------------------ERGLERYSVM---RALRAIERADVALLLIDATE 276
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCE 314
G+TA D IA + ++ K + + VNK +
Sbjct: 277 GVTAQDTHIAGMILESL--KGVAILVNKWD 304
>gi|77164340|ref|YP_342865.1| small GTP-binding protein domain-containing protein [Nitrosococcus
oceani ATCC 19707]
gi|254434862|ref|ZP_05048370.1| GTPase, putative [Nitrosococcus oceani AFC27]
gi|123757906|sp|Q3JCW1.1|DER_NITOC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|76882654|gb|ABA57335.1| Small GTP-binding domain protein [Nitrosococcus oceani ATCC 19707]
gi|207091195|gb|EDZ68466.1| GTPase, putative [Nitrosococcus oceani AFC27]
Length = 464
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 82/182 (45%), Positives = 103/182 (56%), Gaps = 34/182 (18%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VA+VGRPNVGKS LFNRL A+VVD+PGVTRDR YG + +GE F +VDTGGV+
Sbjct: 5 VALVGRPNVGKSTLFNRLTRSRDALVVDQPGVTRDRKYGLAHYGEQSFFVVDTGGVME-- 62
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+E+ + R ++ QA AIEE+ VI FLVDG+ G
Sbjct: 63 -------------------------QESGIGR---LMRAQAQLAIEEADVIFFLVDGREG 94
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
L++ DEEIA WLR K + L +NK E R G + SEF+ LG P+ ISA G G
Sbjct: 95 LSSLDEEIAAWLR--CAQKPLKLVINKAEG-RDGDLVASEFYRLGLGEPIIISAQQGQGV 151
Query: 345 GE 346
G
Sbjct: 152 GR 153
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 89/199 (44%), Gaps = 56/199 (28%)
Query: 167 AIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRD------RMYGRSFWGEHEFMLVDTGG 220
A++GRPNVGKS L NR++G R + + PG TRD R +G+ ++ LVDT G
Sbjct: 180 AVIGRPNVGKSTLVNRILGEERVLSSEIPGTTRDSISIPFRHHGK------DYTLVDTAG 233
Query: 221 VLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLV 280
+ + + I++ + + I Q+ +I + V+I ++
Sbjct: 234 I----RRRSRILDKVEKFSVI-----------------------QSLQSIAIAQVVILVI 266
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCES-PRKGIMQVSE----------FWSL 329
D + D +A + ++ K +++AVNK + P + +V F +
Sbjct: 267 DAHDSVVEQDLHLAGVILES--GKGVVIAVNKWDGLPLEQRQRVKTDLDRRLPFLVFARI 324
Query: 330 GFSPLPISAISGTGTGELL 348
F ISA+ G+G G+L
Sbjct: 325 HF----ISALHGSGVGDLF 339
>gi|379011828|ref|YP_005269640.1| GTP-binding protein EngA [Acetobacterium woodii DSM 1030]
gi|375302617|gb|AFA48751.1| GTP-binding protein EngA [Acetobacterium woodii DSM 1030]
Length = 439
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 79/195 (40%), Positives = 114/195 (58%), Gaps = 33/195 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN+LVG AIV D PGVTRDR+ + W H F L+DTGG+
Sbjct: 4 PIVAVVGRPNVGKSTLFNKLVGERIAIVEDTPGVTRDRIIADAEWQNHHFTLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P+ +D+ + + QA AI+ + +I+ +VDG+
Sbjct: 62 ----EPHTKDDILLQMRV-----------------------QAEVAIDMADLIVLMVDGR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T++D E+A+ +RK+ DK ++LAVNK +S R EF++LG PL ISA G
Sbjct: 95 EGMTSSDLEVANMIRKH--DKDVLLAVNKVDS-RNLENNAYEFYNLGIGEPLAISAEQGL 151
Query: 343 GTGELLDLVCSELKK 357
G G+LLD + + +K+
Sbjct: 152 GLGDLLDEIINHVKR 166
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 29/154 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VA++G+PNVGKS L N+++G R IV D PG TRD + + +++L+DT G+
Sbjct: 179 KVAVIGKPNVGKSTLINKILGEERLIVSDIPGTTRDAVDTSVRYDGEDYVLIDTAGL--- 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + I ED+ + + +A AA+E S V++ L+DG
Sbjct: 236 -RRKKKIYEDIERYSIV-----------------------RAIAAVERSQVVLVLIDGSQ 271
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+T D +IA + II VNK ++ K
Sbjct: 272 GVTEQDAKIAGIAHNRSIPSIII--VNKWDAVEK 303
>gi|313123537|ref|YP_004033796.1| GTP-binding protein enga [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|422845530|ref|ZP_16892240.1| ribosome-associated GTPase EngA [Lactobacillus delbrueckii subsp.
lactis DSM 20072]
gi|312280100|gb|ADQ60819.1| GTP-binding protein engA [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|325684298|gb|EGD26471.1| ribosome-associated GTPase EngA [Lactobacillus delbrueckii subsp.
lactis DSM 20072]
Length = 435
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 89/211 (42%), Positives = 114/211 (54%), Gaps = 39/211 (18%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR++ AIV D PGVTRDR Y R+ W H+F ++DTGG+
Sbjct: 3 LPIVAIVGRPNVGKSTLFNRIINERVAIVEDRPGVTRDRNYARASWMGHQFSIIDTGGI- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
ED +TI E I QA AIEE+ VI+ L D
Sbjct: 62 --------TWED----STIDEE-----------------IRAQAEIAIEEADVIVMLADA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
G+T+ DE IA L + DK ++LAVNK ++P + + +F+SLG P+P+S G
Sbjct: 93 SQGVTSLDERIAHLLYR--ADKPVLLAVNKADNPEQR-TDIYDFYSLGLGDPIPVSGSHG 149
Query: 342 TGTGELLDLVCSEL-----KKVEVCIGFLLI 367
TG G+LLD V K E I F +I
Sbjct: 150 TGIGDLLDEVVKNFPADAEKTEEGVISFSVI 180
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 93/195 (47%), Gaps = 40/195 (20%)
Query: 167 AIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSK 226
+++GRPNVGKS++ NRL+G R IV +E G TRD + +F +VDT G+ K
Sbjct: 178 SVIGRPNVGKSSIVNRLLGEERVIVANEEGTTRDAIDTPFVKDGTKFRVVDTAGIRRRGK 237
Query: 227 SQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGL 286
+ T + +V R A +A+E S V I ++D G+
Sbjct: 238 -------------------VYEKTEKYSVMR--------AMSAMERSDVAILVLDASTGI 270
Query: 287 TAADEEIADWLRKNYMDKFIILAVNKCESPRK---------GIMQVSEFWSLGFSPLP-I 336
D+ +A + + + +I+AVNK + P+K +++ EF L ++P+ +
Sbjct: 271 REQDKHVAGYAHEAGLG--MIIAVNKWDLPKKDSSSGKDFEAVIR-EEFSYLDYAPIVFV 327
Query: 337 SAISGTGTGELLDLV 351
SA +G +L +V
Sbjct: 328 SAKTGKNIDQLPKMV 342
>gi|300812163|ref|ZP_07092607.1| ribosome-associated GTPase EngA [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|300496848|gb|EFK31926.1| ribosome-associated GTPase EngA [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
Length = 435
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 89/211 (42%), Positives = 114/211 (54%), Gaps = 39/211 (18%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR++ AIV D PGVTRDR Y R+ W H+F ++DTGG+
Sbjct: 3 LPIVAIVGRPNVGKSTLFNRIINERVAIVEDRPGVTRDRNYARASWMGHQFSIIDTGGI- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
ED +TI E I QA AIEE+ VI+ L D
Sbjct: 62 --------TWED----STIDEE-----------------IRAQAEIAIEEADVIVMLADA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
G+T+ DE IA L + DK ++LAVNK ++P + + +F+SLG P+P+S G
Sbjct: 93 SQGVTSLDERIAHLLYR--ADKPVLLAVNKADNPEQR-TDIYDFYSLGLGDPIPVSGSHG 149
Query: 342 TGTGELLDLVCSEL-----KKVEVCIGFLLI 367
TG G+LLD V K E I F +I
Sbjct: 150 TGIGDLLDEVVKNFPADAEKTEEGVISFSVI 180
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 93/195 (47%), Gaps = 40/195 (20%)
Query: 167 AIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSK 226
+++GRPNVGKS++ NRL+G R IV +E G TRD + +F +VDT G+ K
Sbjct: 178 SVIGRPNVGKSSIVNRLLGEERVIVANEEGTTRDAIDTPFVKDGTKFRVVDTAGIRRRGK 237
Query: 227 SQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGL 286
+ T + +V R A +A+E S V I ++D G+
Sbjct: 238 -------------------VYEKTEKYSVMR--------AMSAMERSDVAILVLDASTGI 270
Query: 287 TAADEEIADWLRKNYMDKFIILAVNKCESPRK---------GIMQVSEFWSLGFSPLP-I 336
D+ +A + + + +I+AVNK + P+K +++ EF L ++P+ +
Sbjct: 271 REQDKHVAGYAHEAGLG--MIIAVNKWDLPKKDSSSGKDFEAVIR-EEFSYLDYAPIVFV 327
Query: 337 SAISGTGTGELLDLV 351
SA +G +L +V
Sbjct: 328 SAKTGKNVDQLPKMV 342
>gi|224476594|ref|YP_002634200.1| GTP-binding protein EngA [Staphylococcus carnosus subsp. carnosus
TM300]
gi|254783167|sp|B9DNV9.1|DER_STACT RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|222421201|emb|CAL28015.1| putative GTP-binding protein [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 436
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/194 (41%), Positives = 106/194 (54%), Gaps = 34/194 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y W H+F ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIVGERVSIVEDTPGVTRDRIYSSGEWLTHDFNVIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I QA AI+E+ VIIF+V+ +
Sbjct: 62 ----------------------------ELTDAPFQTQIRAQAEIAIDEADVIIFMVNQR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT DE IA L K +K ++LAVNK ++P + +F++LGF P PIS G
Sbjct: 94 EGLTQTDEMIAQMLYKT--NKPVVLAVNKVDNPEMR-TDIYDFYALGFGEPFPISGSHGL 150
Query: 343 GTGELLDLVCSELK 356
G G+LLD V + K
Sbjct: 151 GLGDLLDEVANNFK 164
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 83/162 (51%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+++++GRPNVGKS+L N ++G +R IV + G TRD + + + +++L+DT G+
Sbjct: 177 KLSLIGRPNVGKSSLVNAILGEDRVIVSNIAGTTRDAIDTEYSYEDQDYVLIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ ++D +
Sbjct: 234 -RKKGKVYE---------------STEKYSVLR--------ALKAIERSNVVLVVLDAEE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ +A + + K +++ VNK ++ K + +F
Sbjct: 270 GIIEQDKRVAGYAHEE--GKAVVIVVNKWDTLDKDSKTMKKF 309
>gi|414160851|ref|ZP_11417114.1| GTPase Der [Staphylococcus simulans ACS-120-V-Sch1]
gi|410876530|gb|EKS24428.1| GTPase Der [Staphylococcus simulans ACS-120-V-Sch1]
Length = 436
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 106/194 (54%), Gaps = 34/194 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y W H+F ++DTGG+
Sbjct: 4 PVIAIVGRPNVGKSTIFNRIVGERVSIVEDTPGVTRDRIYSSGEWLTHDFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E + A + I QA AI+E+ VIIF+V+ +
Sbjct: 62 ----------------------------ELSDAPFQTQIRAQAEVAIDEADVIIFMVNQR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT DE IA L K +K ++LAVNK ++P + +F++LGF P PIS G
Sbjct: 94 EGLTQTDEMIAQMLYKT--NKPVVLAVNKVDNPEMR-ADIYDFYALGFGEPFPISGSHGL 150
Query: 343 GTGELLDLVCSELK 356
G G+LLD V K
Sbjct: 151 GLGDLLDEVAKHFK 164
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 82/162 (50%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R++++GRPNVGKS+L N ++G +R IV + G TRD + + +++L+DT G+
Sbjct: 177 RLSLIGRPNVGKSSLVNAILGEDRVIVSNIAGTTRDAIDTEYSYEGQDYVLIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ ++D +
Sbjct: 234 -RKKGKVYE---------------STEKYSVLR--------ALKAIERSNVVLVVLDAEE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ +A + + K I++ VNK ++ K + +F
Sbjct: 270 GIIEQDKRVAGYAHEE--GKAIVIVVNKWDTLEKDSKTMKKF 309
>gi|415724593|ref|ZP_11469971.1| bifunctional cytidylate kinase/GTP-binding protein [Gardnerella
vaginalis 00703C2mash]
gi|388062389|gb|EIK85006.1| bifunctional cytidylate kinase/GTP-binding protein [Gardnerella
vaginalis 00703C2mash]
Length = 740
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 85/201 (42%), Positives = 104/201 (51%), Gaps = 34/201 (16%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+A++GRPNVGKS L NR++G A+V D PGVTRDR+ + W + F LVDTGG
Sbjct: 306 IAVIGRPNVGKSTLVNRILGHRVAVVEDTPGVTRDRVSYDAEWAGNNFKLVDTGGW---- 361
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
EA V + S I +QA A+ S +IFLVDGQ G
Sbjct: 362 --------------------------EADVEGIDSSIAQQAQVAVRLSDAVIFLVDGQVG 395
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
LTA DE I LR K I LAVNK + R + +EFW LG P ISA+ G G
Sbjct: 396 LTATDERIVSMLRA--AGKPITLAVNKVDDARSEYL-TAEFWKLGMGEPYGISAMHGRGV 452
Query: 345 GELLDLVCSELKKVEVCIGFL 365
G+LLD + LKK GFL
Sbjct: 453 GDLLDAALASLKKANKTSGFL 473
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 43/79 (54%), Gaps = 12/79 (15%)
Query: 149 KKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRD------RM 202
KK T G + L RVA+VGRPNVGKS+L N L R++V D G TRD R+
Sbjct: 464 KKANKTSGFLTPEGLRRVALVGRPNVGKSSLLNHLAHEERSVVNDLAGTTRDPVDEVVRV 523
Query: 203 YGRSFWGEHEFMLVDTGGV 221
G +++ +DT G+
Sbjct: 524 DG------EDWLFIDTAGI 536
>gi|415711459|ref|ZP_11464196.1| bifunctional cytidylate kinase/GTP-binding protein [Gardnerella
vaginalis 55152]
gi|388058293|gb|EIK81090.1| bifunctional cytidylate kinase/GTP-binding protein [Gardnerella
vaginalis 55152]
Length = 734
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 101/267 (37%), Positives = 124/267 (46%), Gaps = 58/267 (21%)
Query: 105 DFGIDVDALER-----EAKDAVREYSSLLSRQLIIQDETDDRKDSGKKQKKRKTTIGNVP 159
D I+ D +R E D E +LLS L +DE+ D K G
Sbjct: 253 DAAIEQDEYDRYAANLEGYDLDDEDRALLSGDLASEDESKDTKAVGV------------- 299
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
+A++GRPNVGKS L NR++G A+V D PGVTRDR+ + W F LVDTG
Sbjct: 300 ------IAVIGRPNVGKSTLVNRILGHRVAVVEDTPGVTRDRVSYDAEWAGTNFKLVDTG 353
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G EA V + S I +QA A+ S +IFL
Sbjct: 354 GW------------------------------EADVEGIDSSIAQQAQVAVRLSDAVIFL 383
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISA 338
VDGQ GLTA DE I LR K I LAVNK + R + +EFW LG P ISA
Sbjct: 384 VDGQVGLTATDERIVSMLRA--AGKPITLAVNKVDDARSEYL-TAEFWKLGMGEPYGISA 440
Query: 339 ISGTGTGELLDLVCSELKKVEVCIGFL 365
+ G G G+LLD + LKK GFL
Sbjct: 441 MHGRGVGDLLDAALNSLKKANKTSGFL 467
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 43/79 (54%), Gaps = 12/79 (15%)
Query: 149 KKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRD------RM 202
KK T G + L RVA+VGRPNVGKS+L N L R++V D G TRD R+
Sbjct: 458 KKANKTSGFLTPEGLRRVALVGRPNVGKSSLLNHLAHEERSVVNDLAGTTRDPVDEVVRV 517
Query: 203 YGRSFWGEHEFMLVDTGGV 221
G +++ +DT G+
Sbjct: 518 DG------EDWLFIDTAGI 530
>gi|332663276|ref|YP_004446064.1| GTP-binding protein engA [Haliscomenobacter hydrossis DSM 1100]
gi|332332090|gb|AEE49191.1| GTP-binding protein engA [Haliscomenobacter hydrossis DSM 1100]
Length = 434
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/191 (42%), Positives = 111/191 (58%), Gaps = 33/191 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS FNRL+G ++IV + GVTRDR YG S+W F +VDTGG + S
Sbjct: 5 VAIVGRPNVGKSTFFNRLIGERQSIVDNISGVTRDRQYGASYWNGKNFTVVDTGGFVPHS 64
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
EAA I Q A++E+ VIIFLVD G
Sbjct: 65 DD----------------------VFEAA-------IREQVKIAVDEASVIIFLVDVTTG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGTGT 344
+T DEE+A+ LR++ K + L VNK ++ ++ + + +EFWSLGF + L +SA++G+G+
Sbjct: 96 ITDLDEEVANLLRRS--KKPVFLVVNKVDNGQR-LFEANEFWSLGFENTLFLSALTGSGS 152
Query: 345 GELLDLVCSEL 355
GE+LD V L
Sbjct: 153 GEILDAVADHL 163
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 78/155 (50%), Gaps = 29/155 (18%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
E LPR AIVG+PNVGKS+L N L+G +R IV + G TRD + + EF+LVDT
Sbjct: 171 EDSLPRFAIVGQPNVGKSSLTNALLGEDRNIVTEIAGTTRDSIDALYTKFDKEFILVDTA 230
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G+ + + + E+L + + +A AIE+ V I +
Sbjct: 231 GI----RKKAKVHENLEFYSVL-----------------------RAIKAIEDCDVCILM 263
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
+D Q G+ + D+ I ++ +K I++ VNK +
Sbjct: 264 IDAQTGVESQDQAIFRLAQRR--NKGIVILVNKWD 296
>gi|395243558|ref|ZP_10420543.1| GTPase Der [Lactobacillus hominis CRBIP 24.179]
gi|394484178|emb|CCI81551.1| GTPase Der [Lactobacillus hominis CRBIP 24.179]
Length = 435
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/194 (41%), Positives = 111/194 (57%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA+VGRPNVGKS +FNR++ AIV DEPGVTRDR+Y ++ W HEF+L+DTGG
Sbjct: 3 LPIVALVGRPNVGKSTIFNRIIKSRVAIVEDEPGVTRDRIYSKAEWMGHEFILIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I L + E + I+ QA AI+E+ VI+ L D
Sbjct: 61 -----------------------ITLDSGE-----IDEQIKAQAEIAIDEADVIVMLGDV 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
LT+ DE IA L + K +ILAVNK ++P + + +F+SLGF P+P+S G
Sbjct: 93 TNHLTSMDETIAKMLYRT--KKPVILAVNKADNPEQR-NDIYDFYSLGFGDPIPVSGSHG 149
Query: 342 TGTGELLDLVCSEL 355
TG G+LLD + ++
Sbjct: 150 TGVGDLLDTIVAQF 163
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 91/196 (46%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R +++GRPNVGKS+L N ++G R IV D G TRD + ++ +VDT G+
Sbjct: 176 RFSVIGRPNVGKSSLVNAILGEQRVIVADMEGTTRDAIDTSFNHNGQKYTIVDTAGI--- 232
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E T + +V R A +AIE S + + ++D
Sbjct: 233 -RRRGKVYE---------------KTEKYSVLR--------AVSAIENSDITLLVLDAST 268
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPLP- 335
G+ D+ +A + + +I+ VNK + P K + EF L ++P+
Sbjct: 269 GIREQDKHVAGYAHD--AGRGVIIVVNKWDLPEKDSSSMKDFEDTIRREFQYLDYAPIIF 326
Query: 336 ISAISGTGTGELLDLV 351
+SA +G ++L+LV
Sbjct: 327 VSAKTGKRVPDILNLV 342
>gi|415716505|ref|ZP_11466497.1| bifunctional cytidylate kinase/GTP-binding protein [Gardnerella
vaginalis 1400E]
gi|388057122|gb|EIK79955.1| bifunctional cytidylate kinase/GTP-binding protein [Gardnerella
vaginalis 1400E]
Length = 735
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 101/267 (37%), Positives = 124/267 (46%), Gaps = 58/267 (21%)
Query: 105 DFGIDVDALER-----EAKDAVREYSSLLSRQLIIQDETDDRKDSGKKQKKRKTTIGNVP 159
D I+ D +R E D E +LLS L +DE+ D K G
Sbjct: 254 DAAIEQDEYDRYAANLEGYDLDDEDRALLSGDLANEDESKDTKAVGV------------- 300
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
+A++GRPNVGKS L NR++G A+V D PGVTRDR+ + W F LVDTG
Sbjct: 301 ------IAVIGRPNVGKSTLVNRILGHRVAVVEDTPGVTRDRVSYDAEWAGTNFKLVDTG 354
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G EA V + S I +QA A+ S +IFL
Sbjct: 355 GW------------------------------EADVEGIDSSIAQQAQVAVRLSDAVIFL 384
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISA 338
VDGQ GLTA DE I LR K I LAVNK + R + +EFW LG P ISA
Sbjct: 385 VDGQVGLTATDERIVSMLRA--AGKPITLAVNKVDDARSEYL-TAEFWKLGMGEPYGISA 441
Query: 339 ISGTGTGELLDLVCSELKKVEVCIGFL 365
+ G G G+LLD + LKK GFL
Sbjct: 442 MHGRGVGDLLDAALNSLKKANKTSGFL 468
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 43/79 (54%), Gaps = 12/79 (15%)
Query: 149 KKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRD------RM 202
KK T G + L RVA+VGRPNVGKS+L N L R++V D G TRD R+
Sbjct: 459 KKANKTSGFLTPEGLRRVALVGRPNVGKSSLLNHLAHEERSVVNDLAGTTRDPVDEVVRV 518
Query: 203 YGRSFWGEHEFMLVDTGGV 221
G +++ +DT G+
Sbjct: 519 DG------EDWLFIDTAGI 531
>gi|423069935|ref|ZP_17058711.1| GTP-binding protein engA [Streptococcus intermedius F0413]
gi|355366256|gb|EHG13974.1| GTP-binding protein engA [Streptococcus intermedius F0413]
Length = 436
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 81/200 (40%), Positives = 111/200 (55%), Gaps = 34/200 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATAEWLNRKFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIRHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K IILAVNK ++P ++ +F++LG P P+S+I G
Sbjct: 93 KEGITDADEYVARMLYKTH--KPIILAVNKVDNPEMR-SEIFDFYALGLGEPYPVSSIHG 149
Query: 342 TGTGELLDLVCSELKKVEVC 361
GTG++LD + L K EV
Sbjct: 150 IGTGDVLDAIVENLPKEEVV 169
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 91/197 (46%), Gaps = 39/197 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G R I G TRD + E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEERVIASPVAGTTRDAIDTVFTDSEGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK--GIMQV------SEFWSLGFSPLP 335
G+ D+ IA + + K II+ VNK + K MQ+ ++F L ++P+
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGIIIVVNKWDRLEKDNKTMQIWEADIRNQFQYLSYAPII 326
Query: 336 -ISAISGTGTGELLDLV 351
+SA++ +L D++
Sbjct: 327 FVSALTKQRLHKLPDMI 343
>gi|415721023|ref|ZP_11468267.1| bifunctional cytidylate kinase/GTP-binding protein [Gardnerella
vaginalis 00703Bmash]
gi|388061284|gb|EIK83941.1| bifunctional cytidylate kinase/GTP-binding protein [Gardnerella
vaginalis 00703Bmash]
Length = 740
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 85/201 (42%), Positives = 104/201 (51%), Gaps = 34/201 (16%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+A++GRPNVGKS L NR++G A+V D PGVTRDR+ + W + F LVDTGG
Sbjct: 306 IAVIGRPNVGKSTLVNRILGHRVAVVEDTPGVTRDRVSYDAEWAGNNFKLVDTGGW---- 361
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
EA V + S I +QA A+ S +IFLVDGQ G
Sbjct: 362 --------------------------EADVEGIDSSIAQQAQVAVRLSDAVIFLVDGQVG 395
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
LTA DE I LR K I LAVNK + R + +EFW LG P ISA+ G G
Sbjct: 396 LTATDERIVSMLRA--AGKPITLAVNKVDDARSEYL-TAEFWKLGMGEPYGISAMHGRGV 452
Query: 345 GELLDLVCSELKKVEVCIGFL 365
G+LLD + LKK GFL
Sbjct: 453 GDLLDAALASLKKANKTSGFL 473
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 43/79 (54%), Gaps = 12/79 (15%)
Query: 149 KKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRD------RM 202
KK T G + L RVA+VGRPNVGKS+L N L R++V D G TRD R+
Sbjct: 464 KKANKTSGFLTPEGLRRVALVGRPNVGKSSLLNHLAHEERSVVNDLAGTTRDPVDEVVRV 523
Query: 203 YGRSFWGEHEFMLVDTGGV 221
G +++ +DT G+
Sbjct: 524 DG------EDWLFIDTAGI 536
>gi|415705249|ref|ZP_11460520.1| bifunctional cytidylate kinase/GTP-binding protein [Gardnerella
vaginalis 75712]
gi|388051971|gb|EIK74995.1| bifunctional cytidylate kinase/GTP-binding protein [Gardnerella
vaginalis 75712]
Length = 734
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 104/276 (37%), Positives = 127/276 (46%), Gaps = 55/276 (19%)
Query: 91 DAEYEDVDDESDGQDFGIDVDALEREAKDAVREYSSLLSRQLIIQDETDDRKDSGKKQKK 150
DA E VDD + ++ D A E D E +LLS DE+ D K G
Sbjct: 246 DALVEIVDDAIEQDEY--DRYAANLEGYDLDDEDRALLSGDFASDDESKDTKAVGV---- 299
Query: 151 RKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE 210
+A++GRPNVGKS L NR++G A+V D PGVTRDR+ + W
Sbjct: 300 ---------------IAVIGRPNVGKSTLVNRILGHRVAVVEDTPGVTRDRVSYDAEWAG 344
Query: 211 HEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAI 270
F LVDTGG EA V + S I +QA A+
Sbjct: 345 TNFKLVDTGGW------------------------------EADVEGIDSSIAQQAQVAV 374
Query: 271 EESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLG 330
S +IFLVDGQ GLTA DE I LR K I LAVNK + R + +EFW LG
Sbjct: 375 RLSDAVIFLVDGQVGLTATDERIVSMLRA--AGKPITLAVNKVDDARSEYL-TAEFWKLG 431
Query: 331 FS-PLPISAISGTGTGELLDLVCSELKKVEVCIGFL 365
P ISA+ G G G+LLD + LKK GFL
Sbjct: 432 MGEPYGISAMHGRGVGDLLDAALNSLKKANKTSGFL 467
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 43/79 (54%), Gaps = 12/79 (15%)
Query: 149 KKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRD------RM 202
KK T G + L RVA+VGRPNVGKS+L N L R++V D G TRD R+
Sbjct: 458 KKANKTSGFLTPEGLRRVALVGRPNVGKSSLLNHLAHEERSVVNDLAGTTRDPVDEVVRV 517
Query: 203 YGRSFWGEHEFMLVDTGGV 221
G +++ +DT G+
Sbjct: 518 DG------EDWLFIDTAGI 530
>gi|269118862|ref|YP_003307039.1| small GTP-binding protein [Sebaldella termitidis ATCC 33386]
gi|268612740|gb|ACZ07108.1| small GTP-binding protein [Sebaldella termitidis ATCC 33386]
Length = 440
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 84/199 (42%), Positives = 111/199 (55%), Gaps = 32/199 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L+G +IV D PGVTRDR+Y W EF LVDTGG+
Sbjct: 3 PIVAIVGRPNVGKSTLFNKLIGERLSIVKDVPGVTRDRLYRDVEWSGKEFTLVDTGGL-- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K+Q IM S I+ QA AI+E+ V++FLVDG+
Sbjct: 61 EPKTQDFIM---------------------------SKIKDQAQVAIDEADVVVFLVDGK 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP-LPISAISGT 342
G+T DEE+A LRK DK +I+AVNK ++ K ++ EF+ LGF + IS
Sbjct: 94 YGITGLDEEVAAVLRKK--DKKVIVAVNKIDNYIKNQDRIYEFFGLGFEEVIGISGEHKV 151
Query: 343 GTGELLDLVCSELKKVEVC 361
G+LLD + + +K+
Sbjct: 152 NLGDLLDAIIGKFEKMNTV 170
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 90/206 (43%), Gaps = 38/206 (18%)
Query: 155 IGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFM 214
+ V E + +A++GRPN GKS+L N+++ R+IV D G TRD + + ++
Sbjct: 167 MNTVQEEEVLSIAVLGRPNAGKSSLVNKILNKERSIVSDIAGTTRDSIDSDFRYKNRKYR 226
Query: 215 LVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESC 274
++DT G+ SK +I +V R A AI +
Sbjct: 227 IIDTAGIRRKSKIDDSI-------------------EYYSVLR--------AIKAINRAD 259
Query: 275 VIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL 334
V + ++D +T D+ +A + K +I+A+NK + K V +F L + L
Sbjct: 260 VCVLMLDSTELVTEQDKRVAGLIHDE--KKPLIIAINKWDLIEKDNSTVKQFTELVKTEL 317
Query: 335 P---------ISAISGTGTGELLDLV 351
P +SA++G +LD +
Sbjct: 318 PFLSYAPVITMSALTGQRVMPILDQI 343
>gi|269926863|ref|YP_003323486.1| small GTP-binding protein [Thermobaculum terrenum ATCC BAA-798]
gi|269790523|gb|ACZ42664.1| small GTP-binding protein [Thermobaculum terrenum ATCC BAA-798]
Length = 448
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 108/193 (55%), Gaps = 33/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV-- 221
P VAIVGRPNVGKS FNRL+G AIV DEPG TRDR+YG W F +VDTGG+
Sbjct: 5 PIVAIVGRPNVGKSTFFNRLLGERAAIVQDEPGTTRDRLYGEVSWRGRTFTIVDTGGLET 64
Query: 222 -LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLV 280
++ S +P+ + M+ QA AI E+ +I+F++
Sbjct: 65 SVDSSSDEPDPIR--------------------------RMVREQAEQAIREADLIVFMI 98
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAI 339
D + G T +D EIAD LR+ +K ILAVNK +SP++ V EF+SLG P+P+SA
Sbjct: 99 DVKTGPTPSDYEIADLLRRT--NKPTILAVNKADSPQREYEAV-EFYSLGMGDPIPVSAY 155
Query: 340 SGTGTGELLDLVC 352
G G LLD V
Sbjct: 156 HGMGITPLLDRVV 168
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 77/150 (51%), Gaps = 29/150 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R+AIVGRPNVGKS L N ++G RAIV D PG TRD + WG+ +L+DT G+
Sbjct: 187 RIAIVGRPNVGKSRLLNAILGQERAIVSDVPGTTRDPVDTEIQWGDQRIVLIDTAGIRRR 246
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K + I E ++ T+ AI S V++ L+D Q
Sbjct: 247 GKVESGI-EQYSVFRTL--------------------------RAIGRSDVVLLLIDAQE 279
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCE 314
GLTA DE IA ++ + Y K ++L VNK +
Sbjct: 280 GLTAQDEHIAGYVLEEY--KGLVLVVNKWD 307
>gi|417556572|ref|ZP_12207629.1| ribosome biogenesis GTPase Der [Gardnerella vaginalis 315-A]
gi|333602260|gb|EGL13690.1| ribosome biogenesis GTPase Der [Gardnerella vaginalis 315-A]
Length = 734
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 101/267 (37%), Positives = 124/267 (46%), Gaps = 58/267 (21%)
Query: 105 DFGIDVDALER-----EAKDAVREYSSLLSRQLIIQDETDDRKDSGKKQKKRKTTIGNVP 159
D I+ D +R E D E +LLS L +DE+ D K G
Sbjct: 253 DAAIEQDEYDRYAANLEGYDLDDEDRALLSGDLANEDESKDTKAVGV------------- 299
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
+A++GRPNVGKS L NR++G A+V D PGVTRDR+ + W F LVDTG
Sbjct: 300 ------IAVIGRPNVGKSTLVNRILGHRVAVVEDTPGVTRDRVSYDAEWAGTNFKLVDTG 353
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G EA V + S I +QA A+ S +IFL
Sbjct: 354 GW------------------------------EADVEGIDSSIAQQAQVAVRLSDAVIFL 383
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISA 338
VDGQ GLTA DE I LR K I LAVNK + R + +EFW LG P ISA
Sbjct: 384 VDGQVGLTATDERIVSMLRA--AGKPITLAVNKVDDARSEYL-TAEFWKLGMGEPYGISA 440
Query: 339 ISGTGTGELLDLVCSELKKVEVCIGFL 365
+ G G G+LLD + LKK GFL
Sbjct: 441 MHGRGVGDLLDAALNSLKKANKTSGFL 467
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 43/79 (54%), Gaps = 12/79 (15%)
Query: 149 KKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRD------RM 202
KK T G + L RVA+VGRPNVGKS+L N L R++V D G TRD R+
Sbjct: 458 KKANKTSGFLTPEGLRRVALVGRPNVGKSSLLNHLAHEERSVVNDLAGTTRDPVDEVVRV 517
Query: 203 YGRSFWGEHEFMLVDTGGV 221
G +++ +DT G+
Sbjct: 518 DG------EDWLFIDTAGI 530
>gi|415702234|ref|ZP_11458456.1| bifunctional cytidylate kinase/GTP-binding protein, partial
[Gardnerella vaginalis 284V]
gi|388053563|gb|EIK76543.1| bifunctional cytidylate kinase/GTP-binding protein, partial
[Gardnerella vaginalis 284V]
Length = 585
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 104/276 (37%), Positives = 127/276 (46%), Gaps = 55/276 (19%)
Query: 91 DAEYEDVDDESDGQDFGIDVDALEREAKDAVREYSSLLSRQLIIQDETDDRKDSGKKQKK 150
DA E VDD + ++ D A E D E +LLS DE+ D K G
Sbjct: 97 DALVEIVDDAIEQDEY--DRYAANLEGYDLDDEDRALLSGDFASDDESKDTKAVGV---- 150
Query: 151 RKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE 210
+A++GRPNVGKS L NR++G A+V D PGVTRDR+ + W
Sbjct: 151 ---------------IAVIGRPNVGKSTLVNRILGHRVAVVEDTPGVTRDRVSYDAEWAG 195
Query: 211 HEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAI 270
F LVDTGG EA V + S I +QA A+
Sbjct: 196 TNFKLVDTGGW------------------------------EADVEGIDSSIAQQAQVAV 225
Query: 271 EESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLG 330
S +IFLVDGQ GLTA DE I LR K I LAVNK + R + +EFW LG
Sbjct: 226 RLSDAVIFLVDGQVGLTATDERIVSMLRA--AGKPITLAVNKVDDARSEYL-TAEFWKLG 282
Query: 331 FS-PLPISAISGTGTGELLDLVCSELKKVEVCIGFL 365
P ISA+ G G G+LLD + LKK GFL
Sbjct: 283 MGEPYGISAMHGRGVGDLLDAALNSLKKANKTSGFL 318
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 43/79 (54%), Gaps = 12/79 (15%)
Query: 149 KKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRD------RM 202
KK T G + L RVA+VGRPNVGKS+L N L R++V D G TRD R+
Sbjct: 309 KKANKTSGFLTPEGLRRVALVGRPNVGKSSLLNHLAHEERSVVNDLAGTTRDPVDEVVRV 368
Query: 203 YGRSFWGEHEFMLVDTGGV 221
G +++ +DT G+
Sbjct: 369 DG------EDWLFIDTAGI 381
>gi|51892817|ref|YP_075508.1| GTP-binding protein [Symbiobacterium thermophilum IAM 14863]
gi|81826113|sp|Q67NS9.1|DER_SYMTH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|51856506|dbj|BAD40664.1| GTP-binding protein [Symbiobacterium thermophilum IAM 14863]
Length = 471
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 89/193 (46%), Positives = 109/193 (56%), Gaps = 32/193 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNRL AIV D+PGVTRDR+Y + W LVDTGG+
Sbjct: 3 PIVAIVGRPNVGKSTLFNRLTQSRHAIVEDQPGVTRDRLYADTEWNGRTLTLVDTGGI-- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ EG T EA V RQA AI E+ VIIF+VD
Sbjct: 61 ----------------QLDKEG---DTIEAHVT-------RQAELAIREADVIIFVVDVT 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGT 342
G+TA D E+AD LR+ K +I+AVNK E+ ++ + EFW+LG PL +SA G
Sbjct: 95 DGVTAPDLEVADLLRRQR--KPVIVAVNKVENLKRE-DEALEFWALGLEPLINVSAEHGL 151
Query: 343 GTGELLDLVCSEL 355
GTG+LLD V + L
Sbjct: 152 GTGDLLDAVVAAL 164
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 80/157 (50%), Gaps = 30/157 (19%)
Query: 159 PEHLLP-RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVD 217
PE P RVA++GRPNVGKS+L N ++G R IV D PG TRD + GE +F+L+D
Sbjct: 172 PEEGGPVRVAVIGRPNVGKSSLVNAILGEERVIVSDVPGTTRDAIDVLVERGEDKFLLID 231
Query: 218 TGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVII 277
T G+ ++ E AV R M +A A+E + V++
Sbjct: 232 TAGMRRKARV------------------------EEAVERYSVM---RALRAVERAQVVL 264
Query: 278 FLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
++D Q G+T D+ IA + +N K I+ VNK +
Sbjct: 265 IVIDAQDGVTEQDQRIAGYAHEN--GKACIVVVNKWD 299
>gi|281491251|ref|YP_003353231.1| GTP-binding protein [Lactococcus lactis subsp. lactis KF147]
gi|281374992|gb|ADA64510.1| GTP-binding protein [Lactococcus lactis subsp. lactis KF147]
Length = 436
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 109/194 (56%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y W +F ++DTGG
Sbjct: 3 LPTVAIVGRPNVGKSTIFNRIAGERISIVEDIPGVTRDRIYATGEWLTRKFNIIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I + P T I QA A+ E+ VII +VDG
Sbjct: 61 ------------------IELSDEPFMTE----------IRAQAEIAMTEADVIITVVDG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A+ L + DK +IL VNK ++P + M++ +F+SLG P P+SA+ G
Sbjct: 93 ETGITDADEAVANILYRT--DKPVILVVNKVDNPERR-MEIFDFYSLGLGDPYPVSAVHG 149
Query: 342 TGTGELLDLVCSEL 355
GTG++LD + L
Sbjct: 150 IGTGDVLDAIVQNL 163
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 91/197 (46%), Gaps = 39/197 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + E EF+++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPIAGTTRDAIDTHFVDSEDQEFVMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S +++ +++ +
Sbjct: 236 SGKIYEN-------------------TEKYSVMR--------AMRAIDRSDIVLMVINAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKG--------IMQVSEFWSLGFSPLP 335
G+ D IA + + K I++ VNK ++ K + ++F L ++P+
Sbjct: 269 EGIREYDMRIAGFAHE--AGKGILIVVNKWDTLEKDNDTMKNFELEIRTKFKFLDYAPIV 326
Query: 336 -ISAISGTGTGELLDLV 351
+SA +G +L D++
Sbjct: 327 YVSAKTGQRLNKLPDMI 343
>gi|261406031|ref|YP_003242272.1| GTP-binding protein EngA [Paenibacillus sp. Y412MC10]
gi|329929734|ref|ZP_08283410.1| ribosome biogenesis GTPase Der [Paenibacillus sp. HGF5]
gi|261282494|gb|ACX64465.1| ribosome-associated GTPase EngA [Paenibacillus sp. Y412MC10]
gi|328935712|gb|EGG32173.1| ribosome biogenesis GTPase Der [Paenibacillus sp. HGF5]
Length = 440
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 112/193 (58%), Gaps = 33/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNRL+G AIV D+PG+TRDR+YG + W F ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRLIGDRLAIVEDKPGITRDRIYGSAEWNGKAFSVIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I D I +I M QA AIEE+ VI+F+ D +
Sbjct: 62 ------EIDGDDMILKSIRM---------------------QAELAIEEADVIVFMCDAK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T +DEE+A L ++ K +IL+VNK ++ ++ + EF+SLGF P+ IS GT
Sbjct: 95 TGVTQSDEEVAQILFRS--GKPVILSVNKVDNLKRA-DDIYEFYSLGFGDPVGISGSHGT 151
Query: 343 GTGELLDLVCSEL 355
G G+LLD+V L
Sbjct: 152 GIGDLLDVVVENL 164
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
RVA++GRPNVGKS+L N ++G R IV D G TRD + ++L+DT G+
Sbjct: 178 RVALIGRPNVGKSSLVNAILGEERVIVSDVAGTTRDAIDTPFEKDGQRYVLIDTAGM--- 234
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E T + +V R A AIE + V++ L++G+
Sbjct: 235 -RKRGKVYE---------------TTEKYSVMR--------AMRAIERADVVLVLINGEE 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ IA + + K + VNK + K + +F
Sbjct: 271 GIIEQDKHIAGYAYE--AGKASLFVVNKWDMVEKDDKTMQQF 310
>gi|392429118|ref|YP_006470129.1| GTP-binding protein EngA [Streptococcus intermedius JTH08]
gi|419776548|ref|ZP_14302470.1| ribosome-associated GTPase EngA [Streptococcus intermedius SK54]
gi|383845959|gb|EID83359.1| ribosome-associated GTPase EngA [Streptococcus intermedius SK54]
gi|391758264|dbj|BAM23881.1| GTP-binding protein EngA [Streptococcus intermedius JTH08]
Length = 436
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 81/200 (40%), Positives = 111/200 (55%), Gaps = 34/200 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSMLFNRIAGERISIVEDVEGVTRDRIYATAEWLNRKFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIRHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K IILAVNK ++P ++ +F++LG P P+S+I G
Sbjct: 93 KEGITDADEYVARMLYKTH--KPIILAVNKVDNPEMR-SEIFDFYALGLGEPYPVSSIHG 149
Query: 342 TGTGELLDLVCSELKKVEVC 361
GTG++LD + L K EV
Sbjct: 150 IGTGDVLDAIVENLPKEEVV 169
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 91/197 (46%), Gaps = 39/197 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G R I G TRD + E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEERVIASPVAGTTRDAIDTVFTDSEGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK--GIMQV------SEFWSLGFSPLP 335
G+ D+ IA + + K II+ VNK ++ K MQ ++F L ++P+
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGIIIVVNKWDTLEKDNKTMQTWEADIRNQFQYLSYAPII 326
Query: 336 -ISAISGTGTGELLDLV 351
+SA++ +L D++
Sbjct: 327 FVSALTKQRLHKLPDMI 343
>gi|326391582|ref|ZP_08213112.1| ribosome-associated GTPase EngA [Thermoanaerobacter ethanolicus JW
200]
gi|325992364|gb|EGD50826.1| ribosome-associated GTPase EngA [Thermoanaerobacter ethanolicus JW
200]
Length = 439
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 117/196 (59%), Gaps = 32/196 (16%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
V+IVGRPNVGKS LFN+++G +IV D+PGVTRDR+YG + W + +F+LVDTGG+
Sbjct: 6 VSIVGRPNVGKSTLFNKIMGKRISIVEDKPGVTRDRIYGNAEWLDKKFILVDTGGL---- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
PN ED+ + S + Q AAI+ S VI+FLVD + G
Sbjct: 62 --DPN-AEDI----------------------LFSKVRLQVEAAIDASDVILFLVDAKEG 96
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGTGT 344
L DEEIA+ LR+ K +IL NK +S ++ +F+SLG +P+PISA +G G
Sbjct: 97 LMPEDEEIANILRR--AKKEVILVCNKVDSFKEMPPTYYDFFSLGLGNPIPISASNGLGI 154
Query: 345 GELLDLVCSELKKVEV 360
GELLD V +L + E+
Sbjct: 155 GELLDEVVKKLPQEEL 170
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 104/228 (45%), Gaps = 46/228 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++A++G+PNVGKS+L N+++G R IV + PG TRD + ++L+DT G+
Sbjct: 178 KIAVIGKPNVGKSSLVNKILGEERVIVSNIPGTTRDAIDTPFSKDGKNYVLIDTAGIRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIER----QATAAIEESCVIIFLV 280
S R+ IER +A AAIE S + + ++
Sbjct: 238 S-------------------------------RISESIERYSVLRALAAIERSDICLLMI 266
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSL--------GFS 332
D G T D +IA + +N K II+ VNK ++ +K V+E+ + F+
Sbjct: 267 DATEGPTEQDTKIAGYAFEN--GKGIIIVVNKWDAIKKDNNTVNEYTKMVREKLSFISFA 324
Query: 333 P-LPISAISGTGTGELLDLVCSELKKVEVCIGFLLICNAITKIFHIIP 379
P L ISA +G +L+ V ++ I L+ N + + + P
Sbjct: 325 PILFISAKTGQRVHRVLETVDKVWEEYNKRITTGLLNNVLNEAMLMFP 372
>gi|345017911|ref|YP_004820264.1| GTP-binding protein engA [Thermoanaerobacter wiegelii Rt8.B1]
gi|344033254|gb|AEM78980.1| GTP-binding protein engA [Thermoanaerobacter wiegelii Rt8.B1]
Length = 439
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 117/196 (59%), Gaps = 32/196 (16%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
V+IVGRPNVGKS LFN+++G +IV D+PGVTRDR+YG + W + +F+LVDTGG+
Sbjct: 6 VSIVGRPNVGKSTLFNKIMGKRISIVEDKPGVTRDRIYGNAEWLDKKFILVDTGGL---- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
PN ED+ + S + Q AAI+ S VI+FLVD + G
Sbjct: 62 --DPN-AEDI----------------------LFSKVRLQVEAAIDASDVILFLVDAKEG 96
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGTGT 344
L DEEIA+ LR+ K +IL NK +S ++ +F+SLG +P+PISA +G G
Sbjct: 97 LMPEDEEIANILRR--AKKEVILVCNKVDSFKEMPPTYYDFFSLGLGNPIPISASNGLGI 154
Query: 345 GELLDLVCSELKKVEV 360
GELLD V +L + E+
Sbjct: 155 GELLDEVVKKLPQEEL 170
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 104/228 (45%), Gaps = 46/228 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++A++G+PNVGKS+L N+++G R IV + PG TRD + ++L+DT G+
Sbjct: 178 KIAVIGKPNVGKSSLVNKILGEERVIVSNIPGTTRDAIDTPFSKDGKNYVLIDTAGIRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIER----QATAAIEESCVIIFLV 280
S R+ IER +A AAIE S + + ++
Sbjct: 238 S-------------------------------RISESIERYSVLRALAAIERSDICLLMI 266
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSL--------GFS 332
D G T D +IA + +N K II+ VNK ++ +K V+E+ + F+
Sbjct: 267 DATEGPTEQDTKIAGYAFEN--GKGIIIVVNKWDAIKKDNNTVNEYTKMVREKLSFISFA 324
Query: 333 P-LPISAISGTGTGELLDLVCSELKKVEVCIGFLLICNAITKIFHIIP 379
P L ISA +G +L+ V ++ I L+ N + + + P
Sbjct: 325 PILFISAKTGQRVHRVLETVDKVWEEYNKRITTGLLNNVLNEAMLMFP 372
>gi|253576396|ref|ZP_04853726.1| ribosome-associated GTPase EngA [Paenibacillus sp. oral taxon 786
str. D14]
gi|251844289|gb|EES72307.1| ribosome-associated GTPase EngA [Paenibacillus sp. oral taxon 786
str. D14]
Length = 442
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 114/193 (59%), Gaps = 33/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR++G AIV D+PG+TRDR+YG S W F ++DTGG+
Sbjct: 6 PVVAIVGRPNVGKSTIFNRIIGDRLAIVEDKPGITRDRIYGASEWNGKPFSIIDTGGI-E 64
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ +P I +I M QA AIEE+ VI+F+ D +
Sbjct: 65 LDDEEP-------ILKSIRM---------------------QAELAIEEADVIVFMCDAK 96
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
AG+T +DEE+A+ L ++ K +I+AVNK ++ + I + EF++LGF P+ +S GT
Sbjct: 97 AGVTTSDEEVANLLYRS--GKPVIVAVNKVDNIGR-IDNIYEFYNLGFGEPIGVSGSHGT 153
Query: 343 GTGELLDLVCSEL 355
G G+LLD + L
Sbjct: 154 GIGDLLDAIADNL 166
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
RVA++GRPNVGKS+L N ++G R IV D G TRD + ++L+DT G+
Sbjct: 180 RVALIGRPNVGKSSLVNAILGEERVIVSDIAGTTRDAIDTPFEKDGQRYVLIDTAGM--- 236
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E T + +V R A AIE + V++ L++G+
Sbjct: 237 -RKRGKVYE---------------TTEKYSVMR--------AMKAIERADVVLVLINGEE 272
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ IA + + K I VNK + K + +F
Sbjct: 273 GIIEQDKHIAGYAYE--AGKASIFVVNKWDVVEKDDKTMHQF 312
>gi|118443488|ref|YP_878327.1| GTP-binding protein EngA [Clostridium novyi NT]
gi|166224330|sp|A0Q125.1|DER_CLONN RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|118133944|gb|ABK60988.1| GTP-binding protein engA [Clostridium novyi NT]
Length = 438
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 85/193 (44%), Positives = 110/193 (56%), Gaps = 33/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L G AIV D PGVTRDR+Y + W + F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAGKRIAIVDDMPGVTRDRIYAEAEWLNNNFTIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P + VA+M RQA AIE + V++F+VDG+
Sbjct: 62 ----EPE-------------------NDDIIVAQM----RRQAQLAIEMADVVLFIVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT AD E+A LRK K I+LAVNK + R+ + EF++LG P+PISA G
Sbjct: 95 QGLTDADREVAHMLRK--ASKSIVLAVNKIDR-RQLDDNIYEFYNLGLGDPMPISASQGL 151
Query: 343 GTGELLDLVCSEL 355
G G+LLD V +
Sbjct: 152 GLGDLLDEVIEKF 164
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 91/195 (46%), Gaps = 38/195 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R+A++GRPNVGKS+L N+++G + IV + PG TRD + E +F+L+DT G+
Sbjct: 178 RIAMIGRPNVGKSSLINKILGEEKHIVSNIPGTTRDAVDSYVETEEGKFVLIDTAGLRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK + + R +AV + A+IE + V I ++D
Sbjct: 238 SKIKEQV------------------ERYSAV---------RTLASIENADVCILMIDATE 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF-----WSLGFSP----LP 335
+ DE I + + ++K I++ VNK + K + F L F P L
Sbjct: 271 DIAEQDERIIGYAHE--INKAILVIVNKWDLIEKDDKTMKNFKDKLRTKLSFLPYASFLF 328
Query: 336 ISAISGTGTGELLDL 350
ISA +G ++L +
Sbjct: 329 ISAKTGQRVHKVLGM 343
>gi|415707185|ref|ZP_11462032.1| bifunctional cytidylate kinase/GTP-binding protein [Gardnerella
vaginalis 0288E]
gi|388054185|gb|EIK77130.1| bifunctional cytidylate kinase/GTP-binding protein [Gardnerella
vaginalis 0288E]
Length = 734
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 104/276 (37%), Positives = 127/276 (46%), Gaps = 55/276 (19%)
Query: 91 DAEYEDVDDESDGQDFGIDVDALEREAKDAVREYSSLLSRQLIIQDETDDRKDSGKKQKK 150
DA E VDD + ++ D A E D E +LLS DE+ D K G
Sbjct: 246 DALVEIVDDAIEQDEY--DRYAANLEGYDLDDEDRALLSGDFASDDESKDTKAVGV---- 299
Query: 151 RKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE 210
+A++GRPNVGKS L NR++G A+V D PGVTRDR+ + W
Sbjct: 300 ---------------IAVIGRPNVGKSTLVNRILGHRVAVVEDTPGVTRDRVSYDAEWAG 344
Query: 211 HEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAI 270
F LVDTGG EA V + S I +QA A+
Sbjct: 345 TNFKLVDTGGW------------------------------EADVEGIDSSIAQQAQVAV 374
Query: 271 EESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLG 330
S +IFLVDGQ GLTA DE I LR K I LAVNK + R + +EFW LG
Sbjct: 375 RLSDAVIFLVDGQVGLTATDERIVSMLRA--AGKPITLAVNKVDDARSEYL-TAEFWKLG 431
Query: 331 FS-PLPISAISGTGTGELLDLVCSELKKVEVCIGFL 365
P ISA+ G G G+LLD + LKK GFL
Sbjct: 432 MGEPYGISAMHGRGVGDLLDAALNSLKKANKTSGFL 467
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 43/79 (54%), Gaps = 12/79 (15%)
Query: 149 KKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRD------RM 202
KK T G + L RVA+VGRPNVGKS+L N L R++V D G TRD R+
Sbjct: 458 KKANKTSGFLTPEGLRRVALVGRPNVGKSSLLNHLAHEERSVVNDLAGTTRDPVDEVVRV 517
Query: 203 YGRSFWGEHEFMLVDTGGV 221
G +++ +DT G+
Sbjct: 518 DG------EDWLFIDTAGI 530
>gi|385801665|ref|YP_005838068.1| ribosome-associated GTPase EngA [Gardnerella vaginalis HMP9231]
gi|333393787|gb|AEF31705.1| ribosome-associated GTPase EngA [Gardnerella vaginalis HMP9231]
Length = 734
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 104/276 (37%), Positives = 127/276 (46%), Gaps = 55/276 (19%)
Query: 91 DAEYEDVDDESDGQDFGIDVDALEREAKDAVREYSSLLSRQLIIQDETDDRKDSGKKQKK 150
DA E VDD + ++ D A E D E +LLS DE+ D K G
Sbjct: 246 DALVEIVDDAIEQDEY--DRYAANLEGYDLDDEDRALLSGDFASDDESKDTKAVGV---- 299
Query: 151 RKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE 210
+A++GRPNVGKS L NR++G A+V D PGVTRDR+ + W
Sbjct: 300 ---------------IAVIGRPNVGKSTLVNRILGHRVAVVEDTPGVTRDRVSYDAEWAG 344
Query: 211 HEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAI 270
F LVDTGG EA V + S I +QA A+
Sbjct: 345 TNFKLVDTGGW------------------------------EADVEGIDSSIAQQAQVAV 374
Query: 271 EESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLG 330
S +IFLVDGQ GLTA DE I LR K I LAVNK + R + +EFW LG
Sbjct: 375 RLSDAVIFLVDGQVGLTATDERIVSMLRA--AGKPITLAVNKVDDARSEYL-TAEFWKLG 431
Query: 331 FS-PLPISAISGTGTGELLDLVCSELKKVEVCIGFL 365
P ISA+ G G G+LLD + LKK GFL
Sbjct: 432 MGEPYGISAMHGRGVGDLLDAALNSLKKANKTSGFL 467
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 43/79 (54%), Gaps = 12/79 (15%)
Query: 149 KKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRD------RM 202
KK T G + L RVA+VGRPNVGKS+L N L R++V D G TRD R+
Sbjct: 458 KKANKTSGFLTPEGLRRVALVGRPNVGKSSLLNHLAHEERSVVNDLAGTTRDPVDEVVRV 517
Query: 203 YGRSFWGEHEFMLVDTGGV 221
G +++ +DT G+
Sbjct: 518 DG------EDWLFIDTAGI 530
>gi|296133088|ref|YP_003640335.1| ribosome-associated GTPase EngA [Thermincola potens JR]
gi|296031666|gb|ADG82434.1| ribosome-associated GTPase EngA [Thermincola potens JR]
Length = 440
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 85/193 (44%), Positives = 106/193 (54%), Gaps = 32/193 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNR+ G AIV D+PGVTRDR+Y + W + EF LVDTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNRIAGSRIAIVEDKPGVTRDRIYKDAVWLDKEFTLVDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+D M +I +QA AIEE+ VI+F+VD +
Sbjct: 62 ------EFRDDK--------------------GSMSDLILQQARLAIEEAEVILFVVDAR 95
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
+GLTA DEE+A LR K +IL NK E G M V +F+ LG P+ +SA G
Sbjct: 96 SGLTATDEEVARMLRNT--KKPVILVANKVED-FTGNMDVYDFYRLGLGDPIMVSASHGL 152
Query: 343 GTGELLDLVCSEL 355
G+LLD V L
Sbjct: 153 NVGDLLDEVVKHL 165
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 88/196 (44%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++A++GRPNVGKS++ N L+G R IV D G TRD + G ++L+DT G+
Sbjct: 179 KIAVIGRPNVGKSSIVNALLGEERVIVSDVAGTTRDAIDTYFERGGQRYLLIDTAGMRKK 238
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K I T +V R + A++ S V++ ++D Q
Sbjct: 239 GK-------------------IDEPTERYSVLR--------SLKAVDRSDVVLMIIDAQE 271
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF-----WSLGFSPLP---- 335
+T D++IA + + K ++L VNK + +K + LGF
Sbjct: 272 VVTEQDKKIAGYAHE--AGKAMVLVVNKWDLIKKDDKTTLRYTEEIRQELGFVQYAPVIF 329
Query: 336 ISAISGTGTGELLDLV 351
+SA++ +LDLV
Sbjct: 330 VSALTWQRVPRILDLV 345
>gi|415726985|ref|ZP_11471213.1| bifunctional cytidylate kinase/GTP-binding protein [Gardnerella
vaginalis 00703Dmash]
gi|388062714|gb|EIK85319.1| bifunctional cytidylate kinase/GTP-binding protein [Gardnerella
vaginalis 00703Dmash]
Length = 730
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 86/201 (42%), Positives = 103/201 (51%), Gaps = 34/201 (16%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+A++GRPNVGKS L NR++G A+V D PGVTRDR+ + W F LVDTGG
Sbjct: 296 IAVIGRPNVGKSTLVNRILGHRVAVVEDTPGVTRDRVSYDAEWAGTNFKLVDTGGW---- 351
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
EA V + S I +QA A+ S +IFLVDGQ G
Sbjct: 352 --------------------------EADVEGIDSSIAQQAQVAVRLSDAVIFLVDGQVG 385
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
LTA DE I LR K I LAVNK + R + +EFW LG P ISA+ G G
Sbjct: 386 LTATDERIVSMLRA--AGKPITLAVNKVDDARSEYL-TAEFWKLGMGEPYGISAMHGRGV 442
Query: 345 GELLDLVCSELKKVEVCIGFL 365
G+LLD S LKK GFL
Sbjct: 443 GDLLDAAISSLKKANKTSGFL 463
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 43/79 (54%), Gaps = 12/79 (15%)
Query: 149 KKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRD------RM 202
KK T G + L RVA+VGRPNVGKS+L N L RA+V D G TRD R+
Sbjct: 454 KKANKTSGFLTPQGLRRVALVGRPNVGKSSLLNHLAHEERAVVNDLAGTTRDPVDEVVRV 513
Query: 203 YGRSFWGEHEFMLVDTGGV 221
G +++ +DT G+
Sbjct: 514 DG------EDWLFIDTAGI 526
>gi|308235717|ref|ZP_07666454.1| bifunctional cytidylate kinase/GTP-binding protein [Gardnerella
vaginalis ATCC 14018 = JCM 11026]
gi|311114732|ref|YP_003985953.1| ribosome-associated GTPase EngA [Gardnerella vaginalis ATCC 14019]
gi|310946226|gb|ADP38930.1| ribosome-associated GTPase EngA [Gardnerella vaginalis ATCC 14019]
Length = 734
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 104/276 (37%), Positives = 127/276 (46%), Gaps = 55/276 (19%)
Query: 91 DAEYEDVDDESDGQDFGIDVDALEREAKDAVREYSSLLSRQLIIQDETDDRKDSGKKQKK 150
DA E VDD + ++ D A E D E +LLS DE+ D K G
Sbjct: 246 DALVEIVDDAIEQDEY--DRYAANLEGYDLDDEDRALLSGDFASDDESKDTKAVGV---- 299
Query: 151 RKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE 210
+A++GRPNVGKS L NR++G A+V D PGVTRDR+ + W
Sbjct: 300 ---------------IAVIGRPNVGKSTLVNRILGHRVAVVEDTPGVTRDRVSYDAEWAG 344
Query: 211 HEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAI 270
F LVDTGG EA V + S I +QA A+
Sbjct: 345 TNFKLVDTGGW------------------------------EADVEGIDSSIAQQAQVAV 374
Query: 271 EESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLG 330
S +IFLVDGQ GLTA DE I LR K I LAVNK + R + +EFW LG
Sbjct: 375 RLSDAVIFLVDGQVGLTATDERIVSMLRA--AGKPITLAVNKVDDARSEYL-TAEFWKLG 431
Query: 331 FS-PLPISAISGTGTGELLDLVCSELKKVEVCIGFL 365
P ISA+ G G G+LLD + LKK GFL
Sbjct: 432 MGEPYGISAMHGRGVGDLLDAALNSLKKANKTSGFL 467
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 43/79 (54%), Gaps = 12/79 (15%)
Query: 149 KKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRD------RM 202
KK T G + L RVA+VGRPNVGKS+L N L R++V D G TRD R+
Sbjct: 458 KKANKTSGFLTPEGLRRVALVGRPNVGKSSLLNHLAHEERSVVNDLAGTTRDPVDEVVRV 517
Query: 203 YGRSFWGEHEFMLVDTGGV 221
G +++ +DT G+
Sbjct: 518 DG------EDWLFIDTAGI 530
>gi|15672737|ref|NP_266911.1| GTP-binding protein EngA [Lactococcus lactis subsp. lactis Il1403]
gi|385830298|ref|YP_005868111.1| GTP-binding protein [Lactococcus lactis subsp. lactis CV56]
gi|418039188|ref|ZP_12677494.1| hypothetical protein LLCRE1631_02301 [Lactococcus lactis subsp.
cremoris CNCM I-1631]
gi|26006736|sp|Q9CHH6.1|DER_LACLA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|12723672|gb|AAK04853.1|AE006309_2 GTP-binding protein [Lactococcus lactis subsp. lactis Il1403]
gi|326406306|gb|ADZ63377.1| GTP-binding protein [Lactococcus lactis subsp. lactis CV56]
gi|354692304|gb|EHE92134.1| hypothetical protein LLCRE1631_02301 [Lactococcus lactis subsp.
cremoris CNCM I-1631]
gi|374672795|dbj|BAL50686.1| GTP-binding protein [Lactococcus lactis subsp. lactis IO-1]
Length = 436
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 109/194 (56%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y W +F ++DTGG
Sbjct: 3 LPTVAIVGRPNVGKSTIFNRIAGERISIVEDIPGVTRDRIYATGEWLTRKFNIIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I + P T I QA A+ E+ VII +VDG
Sbjct: 61 ------------------IELSDEPFMTE----------IRAQAEIAMTEADVIIAVVDG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A+ L + DK +IL VNK ++P + M++ +F+SLG P P+SA+ G
Sbjct: 93 ETGITDADEAVANILYRT--DKPVILVVNKVDNPERR-MEIFDFYSLGLGDPYPVSAVHG 149
Query: 342 TGTGELLDLVCSEL 355
GTG++LD + L
Sbjct: 150 IGTGDVLDAIVQNL 163
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 91/197 (46%), Gaps = 39/197 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + E EF+++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPIAGTTRDAIDTHFVDSEDQEFVMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S +++ +++ +
Sbjct: 236 SGKIYEN-------------------TEKYSVMR--------AMRAIDRSDIVLMVINAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKG--------IMQVSEFWSLGFSPLP 335
G+ D IA + + K I++ VNK ++ K + ++F L ++P+
Sbjct: 269 EGIREYDMRIAGFAHE--AGKGILIVVNKWDTLEKDNDTMKNFELEIRTKFKFLDYAPIV 326
Query: 336 -ISAISGTGTGELLDLV 351
+SA +G +L D++
Sbjct: 327 YVSAKTGQRLNKLPDMI 343
>gi|219109543|ref|XP_002176526.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411061|gb|EEC50989.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 551
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/192 (44%), Positives = 111/192 (57%), Gaps = 33/192 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNR--AIVVDEPGVTRDRMYGRS-FWGEHEFMLVDTGG 220
P +AIVGRPNVGKSAL NR+ G AIV DE G+TRDR Y + F GE FM+VDTGG
Sbjct: 70 PLIAIVGRPNVGKSALVNRIAGSQSGGAIVADESGITRDRTYRPAEFLGER-FMIVDTGG 128
Query: 221 VLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLV 280
+ + +D T L +E I QA AIEES +I +V
Sbjct: 129 L---------VFDDDEST---------LFAKE---------IREQAMVAIEESAAVIMVV 161
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAI 339
DGQ GLT D IA++LRK +D + +AVNKCES + G M ++FW LG P P+SA+
Sbjct: 162 DGQTGLTGMDLMIAEFLRKE-VDIPVHVAVNKCESEKTGAMSAADFWGLGLGEPFPVSAL 220
Query: 340 SGTGTGELLDLV 351
G GT E+++ +
Sbjct: 221 HGVGTAEIMETI 232
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 29/42 (69%), Gaps = 2/42 (4%)
Query: 159 PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRD 200
PE + +AI+GRPNVGKS+L N + G RAIV + G TRD
Sbjct: 248 PEEI--NIAIIGRPNVGKSSLLNSIFGDTRAIVSEMAGTTRD 287
>gi|332879048|ref|ZP_08446757.1| ribosome biogenesis GTPase Der [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|357047629|ref|ZP_09109227.1| ribosome biogenesis GTPase Der [Paraprevotella clara YIT 11840]
gi|332682997|gb|EGJ55885.1| ribosome biogenesis GTPase Der [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|355529317|gb|EHG98751.1| ribosome biogenesis GTPase Der [Paraprevotella clara YIT 11840]
Length = 437
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/194 (44%), Positives = 110/194 (56%), Gaps = 35/194 (18%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGG-VLNV 224
VAIVGRPNVGKS LFNRL AIV DE G TRDR YG+S W EF ++DTGG V+N
Sbjct: 5 VAIVGRPNVGKSTLFNRLTQTRHAIVSDEAGTTRDRQYGKSEWTGREFSVIDTGGWVVN- 63
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+I E+ I +Q T A EE+ VI+FLVD +
Sbjct: 64 ---SDDIFEE--------------------------EIRKQVTLATEEADVILFLVDVRN 94
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTG 343
GLT DE +A+ LR+ K +IL NK ++ + I +EF++LG P ISA +G+G
Sbjct: 95 GLTDLDEAVANILRRT--KKPVILVANKADT-NEWIYSAAEFYALGLGDPYCISAATGSG 151
Query: 344 TGELLDLVCSELKK 357
TGELLDL+ S+ K
Sbjct: 152 TGELLDLIVSKFPK 165
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 80/163 (49%), Gaps = 30/163 (18%)
Query: 152 KTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEH 211
KTT E++ PR A+VGRPN GKS+L N +G R IV D G TRD +Y R
Sbjct: 165 KTTDDETDENI-PRFAVVGRPNAGKSSLINAFIGEERNIVTDIAGTTRDSIYTRYTKFGF 223
Query: 212 EFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIE 271
+F LVDT G+ + + + EDL + + ++ AIE
Sbjct: 224 DFYLVDTAGI----RRKNKVTEDLEYYSVM-----------------------RSIRAIE 256
Query: 272 ESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
S V I ++D + G+ A D I +++N +K +++ VNK +
Sbjct: 257 NSDVCILMLDAERGIEAQDLNIFQLIQRN--NKSLVVVVNKWD 297
>gi|323141760|ref|ZP_08076630.1| ribosome biogenesis GTPase Der [Phascolarctobacterium succinatutens
YIT 12067]
gi|322413749|gb|EFY04598.1| ribosome biogenesis GTPase Der [Phascolarctobacterium succinatutens
YIT 12067]
Length = 442
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 111/193 (57%), Gaps = 33/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN +IV D PGVTRDR+Y + W +HEFM+VDTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNIFANSRISIVEDTPGVTRDRLYATAEWLDHEFMMVDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IM AI + I +QA AI+E+ VI+F+ D +
Sbjct: 62 ------EIMNADAIAVS---------------------IRQQAQIAIKEADVILFVCDAR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
AG+T D ++A LR++ K I+LAVNK +SP++ M EF++LG P+ +SA +
Sbjct: 95 AGITTEDADVARLLRQS--KKPIVLAVNKADSPKQE-MNTFEFYNLGIGDPIAVSASNHL 151
Query: 343 GTGELLDLVCSEL 355
G G+LLD V ++
Sbjct: 152 GLGDLLDAVVAKF 164
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 29/159 (18%)
Query: 156 GNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFML 215
G++ E +VA++GRPNVGKS++FN LVG R+IV D G TRD + +++
Sbjct: 171 GDLEEEDEIKVALIGRPNVGKSSIFNALVGEERSIVSDIAGTTRDAIDTPVVRNGQKYLF 230
Query: 216 VDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCV 275
+DT G+ +K I E ++ ++ A++ S V
Sbjct: 231 IDTAGMRRKAKVDEPI-EKYSVMRSL--------------------------RAVDRSDV 263
Query: 276 IIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
++ + D G+T D+ I + + K +IL VNK +
Sbjct: 264 VLMVFDAVEGVTEQDKRIVGYAHE--AGKAVILVVNKWD 300
>gi|392972152|ref|ZP_10337544.1| GTPase Der [Staphylococcus equorum subsp. equorum Mu2]
gi|403046522|ref|ZP_10901991.1| GTP-binding protein EngA [Staphylococcus sp. OJ82]
gi|392509865|emb|CCI60846.1| GTPase Der [Staphylococcus equorum subsp. equorum Mu2]
gi|402763218|gb|EJX17311.1| GTP-binding protein EngA [Staphylococcus sp. OJ82]
Length = 436
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 109/197 (55%), Gaps = 34/197 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y W H+F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTIFNRVVGERVSIVEDTPGVTRDRIYSSGEWLTHDFNVIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I QA AI+ES VIIF+V+ +
Sbjct: 62 ----------------------------EIGDAPFQTQIRAQAEVAIDESDVIIFMVNVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT +D+ +A L K+ K ++LAVNK ++P ++ +F++LGF P PIS G
Sbjct: 94 EGLTQSDQVVAQMLYKS--KKPVVLAVNKVDNPEMR-NEIYDFYALGFGDPYPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVE 359
G G+LLD V K+ E
Sbjct: 151 GLGDLLDEVVKHFKEEE 167
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R++I+GRPNVGKS+L N ++G R IV + G TRD + + + + +++L+DT G+
Sbjct: 177 RLSIIGRPNVGKSSLVNAILGEERVIVSNIAGTTRDAVDTQYTYDDQDYVLIDTAGMRKK 236
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K N T + +V R A AIE S VI+ ++D
Sbjct: 237 GKVYEN-------------------TEKYSVLR--------ALKAIERSNVILVVIDADQ 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ +A + + K I++ VNK ++ K + +F
Sbjct: 270 GIIEQDKRVAGYAHEE--GKAIVIVVNKWDTVDKETNTMKKF 309
>gi|385838784|ref|YP_005876414.1| GTP-binding protein EngA [Lactococcus lactis subsp. cremoris A76]
gi|358750012|gb|AEU40991.1| GTP-binding protein EngA [Lactococcus lactis subsp. cremoris A76]
Length = 436
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 109/194 (56%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y W +F ++DTGG
Sbjct: 3 LPTVAIVGRPNVGKSTIFNRIAGERISIVEDIPGVTRDRIYATGEWLTRKFNIIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I + P T I QA A+ E+ VII +VDG
Sbjct: 61 ------------------IELSDEPFMTE----------IRAQAEIAMTEADVIIAVVDG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A+ L + DK +IL VNK ++P + M++ +F+SLG P P+SA+ G
Sbjct: 93 ETGITDADEAVANILYRT--DKPVILIVNKVDNPERR-MEIFDFYSLGLGDPYPVSAVHG 149
Query: 342 TGTGELLDLVCSEL 355
GTG++LD + L
Sbjct: 150 IGTGDVLDAIVQNL 163
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 95/197 (48%), Gaps = 39/197 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + E EF+++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPIAGTTRDAIDTHFVDSEDQEFVMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S +++ +++ +
Sbjct: 236 SGKIYEN-------------------TEKYSVMR--------AMRAIDRSDIVLMVINAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKC-------ESPRKGIMQV-SEFWSLGFSPLP 335
G+ D IA + ++ K I++ VNK ++ +K +++ ++F L ++P+
Sbjct: 269 EGIREYDMRIAGFAHES--GKGILIVVNKWDTLEKDNDTMKKFELEIRTKFKFLDYAPIV 326
Query: 336 -ISAISGTGTGELLDLV 351
+SA +G +L D++
Sbjct: 327 YVSAKTGQRLNKLPDMI 343
>gi|310827223|ref|YP_003959580.1| hypothetical protein [Eubacterium limosum KIST612]
gi|308738957|gb|ADO36617.1| hypothetical protein ELI_1631 [Eubacterium limosum KIST612]
Length = 439
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/196 (40%), Positives = 113/196 (57%), Gaps = 33/196 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN+LVG AIV D PGVTRDR+ + W H F L+DTGG+
Sbjct: 4 PIVAVVGRPNVGKSTLFNKLVGERIAIVEDTPGVTRDRIIADAEWQNHHFTLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P+ +D+ + + QA AI+ + +I+ LVDG+
Sbjct: 62 ----EPHTKDDILLQMRV-----------------------QAELAIDMADLIVLLVDGR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TA+D E+A+ +RK+ K ++LAVNK +S + + EF++LG P+ ISA G
Sbjct: 95 EGMTASDLEVANMIRKH--SKNVLLAVNKVDSQQLE-NNIFEFYNLGIGEPIAISAEQGL 151
Query: 343 GTGELLDLVCSELKKV 358
G G+ LD V +KKV
Sbjct: 152 GLGDFLDEVIERVKKV 167
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 68/130 (52%), Gaps = 27/130 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++A++G+PN GKS L N++VG +R IV D PG TRD + + ++ L+DT G+
Sbjct: 179 KIAVIGKPNAGKSTLINKMVGHDRLIVSDVPGTTRDAIDTEVRFNGRDYTLIDTAGL--- 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + I ED+ + + +A AA++ S V++ L+DG+
Sbjct: 236 -RKKKKIYEDIERYSIV-----------------------RAIAAVDRSDVVLVLIDGEK 271
Query: 285 GLTAADEEIA 294
G+T D +IA
Sbjct: 272 GVTEQDAKIA 281
>gi|410459388|ref|ZP_11313139.1| GTP-binding protein Der [Bacillus azotoformans LMG 9581]
gi|409930364|gb|EKN67365.1| GTP-binding protein Der [Bacillus azotoformans LMG 9581]
Length = 436
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/195 (43%), Positives = 110/195 (56%), Gaps = 34/195 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y W F ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIVGERISIVEDVPGVTRDRIYSSGEWLNVTFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+G E + + R+ QA AIEE+ VI+F+V+G+
Sbjct: 62 ----------------EVGDEPLLVQMRQ------------QAEIAIEEADVIVFMVNGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TAADEE+A L ++ K I+LAVNK ++ Q+ EF+SLGF P PIS G
Sbjct: 94 EGITAADEEVAKLLFRS--QKPIVLAVNKIDNHEMK-DQIYEFYSLGFGEPFPISGSHGL 150
Query: 343 GTGELLDLVCSELKK 357
G G+LLD V K
Sbjct: 151 GLGDLLDEVVKNFPK 165
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 80/159 (50%), Gaps = 29/159 (18%)
Query: 168 IVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSKS 227
++GRPNVGKS+L N ++G +R IV D G TRD + + E++++DT G+ +
Sbjct: 180 LIGRPNVGKSSLVNAILGEDRVIVSDIEGTTRDAIDTKLTREGQEYVIIDTAGM----RK 235
Query: 228 QPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGLT 287
+ + E+L + + +A AIE S V++ ++DG+ G+
Sbjct: 236 RGKVYENLEKYSVL-----------------------RALKAIERSDVVLVVIDGEKGII 272
Query: 288 AADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
D++IA + + + +++ VNK ++ K + EF
Sbjct: 273 EQDKKIAGYAHE--AGRAVVIVVNKWDAVEKDEKTMKEF 309
>gi|116511562|ref|YP_808778.1| GTP-binding protein EngA [Lactococcus lactis subsp. cremoris SK11]
gi|125624594|ref|YP_001033077.1| GTP-binding protein EngA [Lactococcus lactis subsp. cremoris
MG1363]
gi|389854963|ref|YP_006357207.1| GTP-binding protein EngA [Lactococcus lactis subsp. cremoris
NZ9000]
gi|414073971|ref|YP_006999188.1| GTP-binding protein EngA [Lactococcus lactis subsp. cremoris
UC509.9]
gi|123320527|sp|Q030L6.1|DER_LACLS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|166198724|sp|A2RM49.1|DER_LACLM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|116107216|gb|ABJ72356.1| Predicted GTPase [Lactococcus lactis subsp. cremoris SK11]
gi|124493402|emb|CAL98376.1| putative phosphoglycerate dehydrogenase [Lactococcus lactis subsp.
cremoris MG1363]
gi|300071385|gb|ADJ60785.1| GTP-binding protein EngA [Lactococcus lactis subsp. cremoris
NZ9000]
gi|413973891|gb|AFW91355.1| GTP-binding protein EngA [Lactococcus lactis subsp. cremoris
UC509.9]
Length = 436
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 109/194 (56%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y W +F ++DTGG
Sbjct: 3 LPTVAIVGRPNVGKSTIFNRIAGERISIVEDIPGVTRDRIYATGEWLTRKFNIIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I + P T I QA A+ E+ VII +VDG
Sbjct: 61 ------------------IELSDEPFMTE----------IRAQAEIAMTEADVIIAVVDG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A+ L + DK +IL VNK ++P + M++ +F+SLG P P+SA+ G
Sbjct: 93 ETGITDADEAVANILYRT--DKPVILIVNKVDNPERR-MEIFDFYSLGLGDPYPVSAVHG 149
Query: 342 TGTGELLDLVCSEL 355
GTG++LD + L
Sbjct: 150 IGTGDVLDAIVQNL 163
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 94/197 (47%), Gaps = 39/197 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + E EF+++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPIAGTTRDAIDTHFVDSEDQEFVMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S +++ +++ +
Sbjct: 236 SGKIYEN-------------------TEKYSVMR--------AMRAIDRSDIVLMVINAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKC-------ESPRKGIMQV-SEFWSLGFSPLP 335
G+ D IA + + K I++ VNK ++ +K +++ ++F L ++P+
Sbjct: 269 EGIREYDMRIAGFAHE--AGKGILIVVNKWDTLEKDNDTMKKFELEIRTKFKFLDYAPIV 326
Query: 336 -ISAISGTGTGELLDLV 351
+SA +G +L D++
Sbjct: 327 YVSAKTGQRLNKLPDMI 343
>gi|366086020|ref|ZP_09452505.1| GTP-binding protein Der [Lactobacillus zeae KCTC 3804]
Length = 435
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/197 (41%), Positives = 113/197 (57%), Gaps = 34/197 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP +AIVGRPNVGKS +FNR++G +IV D PGVTRDR+YG+S W EF ++DTGG+
Sbjct: 2 VLPTLAIVGRPNVGKSTIFNRILGERVSIVEDTPGVTRDRIYGKSEWLGKEFAVIDTGGI 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+G E P S I+ QA AIEE+ VI+FL
Sbjct: 62 ------------------DLGDE--PFL----------SQIKDQAEIAIEEADVILFLTS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
+AG+T ADE +A L + K ++LAVNK ++P + + +F+SLGF P P+S
Sbjct: 92 VEAGVTDADERVAQILYR--AKKPVVLAVNKVDNPERR-QDIYDFYSLGFGEPFPLSGTH 148
Query: 341 GTGTGELLDLVCSELKK 357
G G G++LD V + K
Sbjct: 149 GIGLGDVLDAVLAVFPK 165
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 29/165 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+ +++GRPNVGKS+L N ++G NR IV G TRD + + F ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLVNAILGENRVIVSPIEGTTRDAIDTKFETDGETFTMIDTAGIRKR 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K N T + AV R A AI+ S V++ +++ +
Sbjct: 236 GKVYEN-------------------TEKYAVLR--------ALRAIDRSDVVLVVINAEE 268
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSL 329
G+ D+++A + + + II+ VNK ++ K + +F +L
Sbjct: 269 GIREQDKKVAGYAHE--AGRGIIIVVNKWDTVEKDNHTMKDFENL 311
>gi|402571674|ref|YP_006621017.1| ribosome-associated GTPase EngA [Desulfosporosinus meridiei DSM
13257]
gi|402252871|gb|AFQ43146.1| ribosome-associated GTPase EngA [Desulfosporosinus meridiei DSM
13257]
Length = 443
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/193 (44%), Positives = 108/193 (55%), Gaps = 31/193 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNR+ GG AIV + PGVTRDR+Y + W +F L+DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNRITGGLVAIVENMPGVTRDRLYRDAEWLGRKFALIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
EG P++ S + RQA A+EE+ V+IF+VD Q
Sbjct: 62 ----------------EFKDEGTPIS----------SQMRRQAEIAMEEADVVIFVVDAQ 95
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
T DE IA LR++ K ++LA NK E K Q+ EF S G +PISA+ G
Sbjct: 96 ISPTPEDELIARTLRRS--GKPVLLAANKVEDFTKIEGQLYEFLSFGLGEAIPISAVHGM 153
Query: 343 GTGELLDLVCSEL 355
TG+LLDLV S L
Sbjct: 154 NTGDLLDLVISHL 166
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 101/199 (50%), Gaps = 44/199 (22%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHE---FMLVDTGGV 221
R++++GRPNVGKS+L N L+G R IV + PG TRD + F EHE ++L+DT G+
Sbjct: 180 RISVIGRPNVGKSSLVNTLLGRERVIVSNIPGTTRDAI-DTPF--EHEGKHYILIDTAGM 236
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
S+ +E+L T + +V R + A++ S I+ L+D
Sbjct: 237 RRKSR-----IEEL--------------TEQYSVVR--------SLRAVDRSDAILMLID 269
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS--------LGFSP 333
G+T D++IA + + K IIL VNK + K +++F L ++P
Sbjct: 270 AVDGVTEQDKKIAGYAEE--AGKAIILVVNKWDLVEKDEKTINKFEKSIREELGFLQYAP 327
Query: 334 -LPISAISGTGTGELLDLV 351
+ ISA +G ++LDLV
Sbjct: 328 TMFISAKTGQRVNKILDLV 346
>gi|167040606|ref|YP_001663591.1| GTP-binding protein EngA [Thermoanaerobacter sp. X514]
gi|300914647|ref|ZP_07131963.1| ribosome-associated GTPase EngA [Thermoanaerobacter sp. X561]
gi|307724119|ref|YP_003903870.1| ribosome-associated GTPase EngA [Thermoanaerobacter sp. X513]
gi|238687595|sp|B0K3E4.1|DER_THEPX RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|166854846|gb|ABY93255.1| small GTP-binding protein [Thermoanaerobacter sp. X514]
gi|300889582|gb|EFK84728.1| ribosome-associated GTPase EngA [Thermoanaerobacter sp. X561]
gi|307581180|gb|ADN54579.1| ribosome-associated GTPase EngA [Thermoanaerobacter sp. X513]
Length = 439
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 116/196 (59%), Gaps = 32/196 (16%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
V+IVGRPNVGKS LFN+++G +IV D+PGVTRDR+YG + W + +F+LVDTGG+
Sbjct: 6 VSIVGRPNVGKSTLFNKIMGKRISIVEDKPGVTRDRIYGNAEWLDKKFILVDTGGL---- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
PN ED+ + S + Q AAI+ S VI+FLVD + G
Sbjct: 62 --DPN-AEDI----------------------LFSKVRLQVEAAIDTSDVILFLVDAKEG 96
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGTGT 344
L DEEIA+ LR+ K +IL NK +S ++ +F+SLG +P+PISA +G G
Sbjct: 97 LMPEDEEIANILRR--AKKEVILVCNKVDSFKEMPPTYYDFFSLGLGNPIPISASNGLGI 154
Query: 345 GELLDLVCSELKKVEV 360
GELLD V L + E+
Sbjct: 155 GELLDEVVKRLPQEEL 170
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 104/228 (45%), Gaps = 46/228 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++A++G+PNVGKS+L N+++G R IV + PG TRD + ++L+DT G+
Sbjct: 178 KIAVIGKPNVGKSSLVNKILGEERVIVSNIPGTTRDAIDTPFSKDGKNYVLIDTAGIRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIER----QATAAIEESCVIIFLV 280
S R+ IER +A AAIE S + + ++
Sbjct: 238 S-------------------------------RISESIERYSVLRALAAIERSDICLLMI 266
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSL--------GFS 332
D G T D +IA + +N K II+ VNK ++ +K V+E+ + F+
Sbjct: 267 DATEGPTEQDTKIAGYAFEN--GKGIIIVVNKWDAIKKDNNTVNEYTKMVREKLSFISFA 324
Query: 333 P-LPISAISGTGTGELLDLVCSELKKVEVCIGFLLICNAITKIFHIIP 379
P L ISA +G +L+ V ++ I L+ N + + + P
Sbjct: 325 PILFISAKTGQRVHRVLETVDKVWEEYNKRITTGLLNNVLNEAILMFP 372
>gi|392940711|ref|ZP_10306355.1| LOW QUALITY PROTEIN: ribosome-associated GTPase EngA
[Thermoanaerobacter siderophilus SR4]
gi|392292461|gb|EIW00905.1| LOW QUALITY PROTEIN: ribosome-associated GTPase EngA
[Thermoanaerobacter siderophilus SR4]
Length = 439
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 117/196 (59%), Gaps = 32/196 (16%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
V+IVGRPNVGKS LFN+++G +IV D+PGVTRDR+YG + W + +F+LVDTGG+
Sbjct: 6 VSIVGRPNVGKSTLFNKIMGKRISIVEDKPGVTRDRVYGNAEWLDKKFILVDTGGL---- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
PN ED+ + S + Q AAI+ S VI+FLVD + G
Sbjct: 62 --DPN-AEDI----------------------LFSKVRLQVEAAIDASDVILFLVDAKEG 96
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGTGT 344
L DEEIA+ LR+ K +IL NK +S ++ +F+SLG +P+PISA +G G
Sbjct: 97 LMPEDEEIANILRR--AKKEVILVCNKVDSFKEMPPTYYDFFSLGLGNPIPISASNGLGI 154
Query: 345 GELLDLVCSELKKVEV 360
GELLD V +L + E+
Sbjct: 155 GELLDEVVKKLPQEEL 170
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 104/228 (45%), Gaps = 46/228 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++A++G+PNVGKS+L N+++G R IV + PG TRD + ++L+DT G+
Sbjct: 178 KIAVIGKPNVGKSSLVNKILGEERVIVSNIPGTTRDAIDTPFSKDGKNYVLIDTAGIRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIER----QATAAIEESCVIIFLV 280
S R+ IER +A AAIE S + + ++
Sbjct: 238 S-------------------------------RISESIERYSVLRALAAIERSDICLLMI 266
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSL--------GFS 332
D G T D +IA + +N K II+ VNK ++ +K V+E+ + F+
Sbjct: 267 DATEGPTEQDTKIAGYAFEN--GKGIIIVVNKWDAIKKDNNTVNEYTKMVREKLSFISFA 324
Query: 333 P-LPISAISGTGTGELLDLVCSELKKVEVCIGFLLICNAITKIFHIIP 379
P L ISA +G +L+ V ++ I L+ N + + + P
Sbjct: 325 PILFISAKTGQRVHRVLETVDKVWEEYNKRITTGLLNNVLNEAMLMFP 372
>gi|297243478|ref|ZP_06927410.1| GTPase [Gardnerella vaginalis AMD]
gi|296888523|gb|EFH27263.1| GTPase [Gardnerella vaginalis AMD]
Length = 734
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/201 (42%), Positives = 103/201 (51%), Gaps = 34/201 (16%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+AI+GRPNVGKS L NR++G A+V D PGVTRDR+ + W F LVDTGG
Sbjct: 300 IAIIGRPNVGKSTLVNRILGHRVAVVEDTPGVTRDRVSYDAEWAGTNFKLVDTGGW---- 355
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
EA V + S I +QA A+ S +IFLVDGQ G
Sbjct: 356 --------------------------EADVEGIDSSIAQQAQVAVRLSDAVIFLVDGQVG 389
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
LTA DE I LR K I LAVNK + R + +EFW LG P ISA+ G G
Sbjct: 390 LTATDERIVSMLRA--AGKPITLAVNKVDDARSEYL-TAEFWKLGMGEPYGISAMHGRGV 446
Query: 345 GELLDLVCSELKKVEVCIGFL 365
G+LLD + LKK GFL
Sbjct: 447 GDLLDAALNSLKKANKTSGFL 467
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 43/79 (54%), Gaps = 12/79 (15%)
Query: 149 KKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRD------RM 202
KK T G + L RVA+VGRPNVGKS+L N L R++V D G TRD R+
Sbjct: 458 KKANKTSGFLTPEGLRRVALVGRPNVGKSSLLNHLAHEERSVVNDLAGTTRDPVDEVVRV 517
Query: 203 YGRSFWGEHEFMLVDTGGV 221
G +++ +DT G+
Sbjct: 518 DG------EDWLFIDTAGI 530
>gi|374308439|ref|YP_005054870.1| ribosome-associated GTPase EngA [Filifactor alocis ATCC 35896]
gi|291166767|gb|EFE28813.1| ribosome-associated GTPase EngA [Filifactor alocis ATCC 35896]
Length = 437
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 113/197 (57%), Gaps = 33/197 (16%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+ P VAIVGRPNVGKS LFN+LVG AIV D PGVTRDR+YG + W F ++DTGG+
Sbjct: 1 MRPIVAIVGRPNVGKSTLFNKLVGSRVAIVEDTPGVTRDRIYGEAEWLTDYFTVIDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
N S +D+ +P+ + RQA A++ + VI+F+V+
Sbjct: 61 DNDS-------DDI----------------------IPAQMRRQAELAMDTADVILFVVN 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T D EIA+ LR+ K I+LAVNK ++ + +F+ LG PLPISA
Sbjct: 92 GRDGVTPQDREIAEQLRRT--KKPIVLAVNKVDN-KNLPDYFYDFYELGVGEPLPISASV 148
Query: 341 GTGTGELLDLVCSELKK 357
G G G+LLD+V K
Sbjct: 149 GLGIGDLLDVVAENFPK 165
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 89/198 (44%), Gaps = 38/198 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VAIVG+PN GKS++ NR++G R IV G TRD + + E++ +DT G+
Sbjct: 177 KVAIVGKPNAGKSSIINRILGEERVIVSPIAGTTRDAIDTYFHVKDQEYLFIDTAGIRKK 236
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK NI + I ++ AA+E + V++ ++D
Sbjct: 237 SKIDENIEKYSVI---------------------------RSYAAVERADVVLIVIDANI 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVS-----EFWSLGFSPLP- 335
G++ D +IA K ++ VNK E K I + E + ++P+
Sbjct: 270 GISEQDSKIAGLAHN--AGKSTVIVVNKWDLVEKDNKSIQTYTESIRQELPFMSYAPIIF 327
Query: 336 ISAISGTGTGELLDLVCS 353
+S +G G++++ + +
Sbjct: 328 VSTTTGQRFGKIIESINA 345
>gi|188586247|ref|YP_001917792.1| small GTP-binding protein [Natranaerobius thermophilus JW/NM-WN-LF]
gi|226741142|sp|B2A4M9.1|DER_NATTJ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|179350934|gb|ACB85204.1| small GTP-binding protein [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 440
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/195 (42%), Positives = 111/195 (56%), Gaps = 35/195 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VA+VGRPNVGKSALFNR+VG +IV D PGVTRDR+ G+ W H F L+DTGG+ +
Sbjct: 7 VALVGRPNVGKSALFNRIVGQRISIVDDTPGVTRDRIDGKGEWSGHSFNLIDTGGIFD-- 64
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+ +I++ + I QA AI+E+ VI+F+ DG+ G
Sbjct: 65 -EEDDILKQVVI---------------------------QAEVAIDEADVIVFVTDGRDG 96
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP-LPISAISGTGT 344
+T ADEE+A LRK K +++AVNK E EF+ LGF + ISA+ GT T
Sbjct: 97 ITPADEEVAATLRKT--KKPVLVAVNKSEGNYD--QYAMEFYQLGFEQVISISALHGTNT 152
Query: 345 GELLDLVCSELKKVE 359
G+LLD + L + E
Sbjct: 153 GQLLDEIVELLPEQE 167
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 70/153 (45%), Gaps = 29/153 (18%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
++++GRPNVGKS+L N+++ R IV + PG TRD + + +++ +DT G+ S
Sbjct: 180 LSVIGRPNVGKSSLINKILNKERLIVSNMPGTTRDAIDTVIEREDQKYVFIDTAGLRKKS 239
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
K + + I + GM E S + + L+D G
Sbjct: 240 KIDERLEKYSVIRSIKGM---------------------------ERSNIALLLIDVTKG 272
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
+ D++IA + K +I+ +NK ++ K
Sbjct: 273 ILEQDKKIAGLAEEK--GKGLIILLNKWDAIEK 303
>gi|134299023|ref|YP_001112519.1| GTP-binding protein EngA [Desulfotomaculum reducens MI-1]
gi|172044273|sp|A4J3P1.1|DER_DESRM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|134051723|gb|ABO49694.1| small GTP-binding protein [Desulfotomaculum reducens MI-1]
Length = 439
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 107/193 (55%), Gaps = 35/193 (18%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNR+VG AIV D PGVTRDR+Y + W EF LVDTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNRIVGARIAIVEDMPGVTRDRLYQDAEWQGREFTLVDTGGL-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ ED+ + + I +QA AI E+ +I+F+VD +
Sbjct: 62 ------DFAEDI----------------------ITAQIRKQAELAIYEADIILFVVDAR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLTA DEE+ LR+ DK +IL NK E K + +F+ LG P+P+SA G
Sbjct: 94 EGLTAIDEEVGRTLRR--ADKPVILVANKVEHFDK--IPYYDFYQLGLGDPVPVSAAEGL 149
Query: 343 GTGELLDLVCSEL 355
TG+LLD + L
Sbjct: 150 NTGDLLDELVKNL 162
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 87/205 (42%), Gaps = 41/205 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R+A++GRPNVGKS+L N ++G R IV + PG TRD + ++LVDT G+
Sbjct: 176 RIAVIGRPNVGKSSLVNTILGEERVIVSNIPGTTRDAIDSSFEKNGKNYVLVDTAGMRRR 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K I L T +V R A A++ V + + D
Sbjct: 236 KK-------------------IDLPTERYSVVR--------ALRAVDRCDVALMVFDATE 268
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS--------LGFSP-LP 335
G+ D+ I + + K IIL +NK + K ++ F L + P L
Sbjct: 269 GIAEQDKRIVGYAHEK--GKAIILIINKWDLIEKDDKTMNRFEKKIREELAFLDYVPTLY 326
Query: 336 ISAISGTGTGELL---DLVCSELKK 357
ISA++ ++L D V E K
Sbjct: 327 ISALTKQRVPKVLETVDFVAEEASK 351
>gi|298252771|ref|ZP_06976565.1| GTPase [Gardnerella vaginalis 5-1]
gi|297533135|gb|EFH72019.1| GTPase [Gardnerella vaginalis 5-1]
Length = 734
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/201 (42%), Positives = 103/201 (51%), Gaps = 34/201 (16%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+AI+GRPNVGKS L NR++G A+V D PGVTRDR+ + W F LVDTGG
Sbjct: 300 IAIIGRPNVGKSTLVNRILGHRVAVVEDTPGVTRDRVSYDAEWAGTNFKLVDTGGW---- 355
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
EA V + S I +QA A+ S +IFLVDGQ G
Sbjct: 356 --------------------------EADVEGIDSSIAQQAQVAVRLSDAVIFLVDGQVG 389
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
LTA DE I LR K I LAVNK + R + +EFW LG P ISA+ G G
Sbjct: 390 LTATDERIVSMLRA--AGKPITLAVNKVDDARSEYL-TAEFWKLGMGEPYGISAMHGRGV 446
Query: 345 GELLDLVCSELKKVEVCIGFL 365
G+LLD + LKK GFL
Sbjct: 447 GDLLDAALNSLKKANKTSGFL 467
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 43/79 (54%), Gaps = 12/79 (15%)
Query: 149 KKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRD------RM 202
KK T G + L RVA+VGRPNVGKS+L N L R++V D G TRD R+
Sbjct: 458 KKANKTSGFLTPEGLRRVALVGRPNVGKSSLLNHLAHEERSVVNDLAGTTRDPVDEVVRV 517
Query: 203 YGRSFWGEHEFMLVDTGGV 221
G +++ +DT G+
Sbjct: 518 DG------EDWLFIDTAGI 530
>gi|415709961|ref|ZP_11463540.1| bifunctional cytidylate kinase/GTP-binding protein [Gardnerella
vaginalis 6420B]
gi|388055963|gb|EIK78848.1| bifunctional cytidylate kinase/GTP-binding protein [Gardnerella
vaginalis 6420B]
Length = 734
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/201 (42%), Positives = 103/201 (51%), Gaps = 34/201 (16%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+AI+GRPNVGKS L NR++G A+V D PGVTRDR+ + W F LVDTGG
Sbjct: 300 IAIIGRPNVGKSTLVNRILGHRVAVVEDTPGVTRDRVSYDAEWAGTNFKLVDTGGW---- 355
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
EA V + S I +QA A+ S +IFLVDGQ G
Sbjct: 356 --------------------------EADVEGIDSSIAQQAQVAVRLSDAVIFLVDGQVG 389
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
LTA DE I LR K I LAVNK + R + +EFW LG P ISA+ G G
Sbjct: 390 LTATDERIVSMLRA--AGKPITLAVNKVDDARSEYL-TAEFWKLGMGEPYGISAMHGRGV 446
Query: 345 GELLDLVCSELKKVEVCIGFL 365
G+LLD + LKK GFL
Sbjct: 447 GDLLDAALNSLKKANKTSGFL 467
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 41/73 (56%)
Query: 149 KKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFW 208
KK T G + L RVA+VGRPNVGKS+L N L R++V D G TRD +
Sbjct: 458 KKANKTSGFLTPEGLRRVALVGRPNVGKSSLLNHLAHEERSVVNDLAGTTRDPVDEVVRV 517
Query: 209 GEHEFMLVDTGGV 221
+++ +DT G+
Sbjct: 518 DCEDWLFIDTAGI 530
>gi|345857524|ref|ZP_08809958.1| small GTP-binding domain protein [Desulfosporosinus sp. OT]
gi|344329352|gb|EGW40696.1| small GTP-binding domain protein [Desulfosporosinus sp. OT]
Length = 443
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/193 (44%), Positives = 109/193 (56%), Gaps = 31/193 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNR+ GG AIV + PGVTRDR+Y + W +F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTLFNRITGGLVAIVENMPGVTRDRLYRDAEWLGRKFALIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
EG P+A S + RQA A+EE+ V+IF+VD Q
Sbjct: 62 ----------------EFKDEGTPIA----------SQMRRQAEIAMEEADVVIFVVDSQ 95
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
T+ DE IA LR++ K +ILA NK E K Q+ +F SLG +PISA+ G
Sbjct: 96 ISPTSDDELIARTLRRS--GKPVILAANKVEDFEKVEGQLYDFLSLGLGEAIPISAVHGM 153
Query: 343 GTGELLDLVCSEL 355
TG+LLD+V L
Sbjct: 154 NTGDLLDMVIWNL 166
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 99/199 (49%), Gaps = 44/199 (22%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHE---FMLVDTGGV 221
R++++GRPNVGKS+L N ++G NR IV + PG TRD + F EHE ++L+DT G+
Sbjct: 180 RISVIGRPNVGKSSLVNTMLGKNRVIVSNIPGTTRDAI-DTPF--EHEGKHYILIDTAGM 236
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
++ I T + +V R + A++ S +I+ L+D
Sbjct: 237 RRKAR-------------------IDELTEQYSVVR--------SLRAVDRSDMILMLID 269
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS--------LGFSP 333
G+T D++IA + + K IIL VNK + K ++ F + ++P
Sbjct: 270 AVDGVTEQDKKIAGYAHE--AGKAIILIVNKWDLVEKDEKTINVFEKTIREELSFMQYAP 327
Query: 334 -LPISAISGTGTGELLDLV 351
+ ISA +G ++L+LV
Sbjct: 328 TMFISAKTGQRVNKILELV 346
>gi|404418697|ref|ZP_11000464.1| GTP-binding protein Der [Staphylococcus arlettae CVD059]
gi|403489290|gb|EJY94868.1| GTP-binding protein Der [Staphylococcus arlettae CVD059]
Length = 436
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/195 (41%), Positives = 109/195 (55%), Gaps = 34/195 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y W H+F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTIFNRVVGERVSIVEDTPGVTRDRIYSTGEWLTHDFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I QA AI+E+ VIIF+V+ +
Sbjct: 62 ----------------------------EIGDAPFQTQIRAQAEIAIDEADVIIFMVNIR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT +DE +A L K+ K ++LAVNK ++P ++ +F++LGF P PIS G
Sbjct: 94 EGLTQSDEIVAQLLYKS--KKPVVLAVNKVDNPEMR-NEIYDFYALGFGEPYPISGSHGL 150
Query: 343 GTGELLDLVCSELKK 357
G G+LLD V + K+
Sbjct: 151 GLGDLLDAVVTHFKE 165
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 82/162 (50%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R++I+GRPNVGKS+L N ++G +R IV + G TRD + + + F+L+DT G+
Sbjct: 177 RLSIIGRPNVGKSSLVNAILGEDRVIVSNVAGTTRDAVDTEYSYDDQNFVLIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ ++D +
Sbjct: 234 -RKKGKVYE---------------STEKYSVLR--------ALKAIERSNVVLVVIDAEQ 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ +A + + K I++ VNK ++ K + +F
Sbjct: 270 GIIEQDKRVAGYAHEE--GKAIVIVVNKWDTVDKETNTMKKF 309
>gi|366088528|ref|ZP_09455001.1| GTP-binding protein Der, partial [Lactobacillus acidipiscis KCTC
13900]
Length = 450
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 109/193 (56%), Gaps = 34/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA VGRPNVGKS +FNR+ G +IV D PGVTRDR+Y S W F ++DTGG
Sbjct: 18 PVVAFVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYAHSEWLGQNFDIIDTGG--- 74
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I + PL T+ I QA AI+E+ VI+ +V Q
Sbjct: 75 -----------------IEISNEPLITQ----------ITEQAKIAIDEADVIVAIVSVQ 107
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADEE+A L ++ DK +ILAVNK ++P + Q+ +F+SLG P+P+S G
Sbjct: 108 EGVTDADEEVAQILYQS--DKPVILAVNKVDNP-EARSQIYDFYSLGLGDPIPVSGTHGI 164
Query: 343 GTGELLDLVCSEL 355
GTG+LLD +C+
Sbjct: 165 GTGDLLDKICASF 177
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 85/180 (47%), Gaps = 40/180 (22%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEH--EFMLVDTGGVL 222
+ + +GRPNVGKS+L N ++G NR IV G TRD + + F E+ E+ ++DT G+
Sbjct: 190 KFSFIGRPNVGKSSLVNSILGENRVIVSGIEGTTRDAIDTK-FSTENGTEYTMIDTAGIR 248
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A AI+ S V+ +++
Sbjct: 249 KRGKVYEN-------------------TEKYSVLR--------AMRAIDRSDVVCVVLNA 281
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSPL 334
+ G+ D+ +A + + + +I+ VNK ++ +KG + +EF L ++PL
Sbjct: 282 EEGIREQDKHVAGYAHE--AGRGVIIVVNKWDTLKKGNHSMQQFEAAVRAEFQYLSYAPL 339
>gi|256847158|ref|ZP_05552604.1| ribosome-associated GTPase EngA [Lactobacillus coleohominis
101-4-CHN]
gi|256715822|gb|EEU30797.1| ribosome-associated GTPase EngA [Lactobacillus coleohominis
101-4-CHN]
Length = 437
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 108/193 (55%), Gaps = 34/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNR+ G +IV D PGVTRDR+Y + W F L+DTGG
Sbjct: 5 PIVAIVGRPNVGKSTLFNRIAGERISIVEDTPGVTRDRIYTHAEWLGKNFNLIDTGG--- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I M PL T+ I QA AI+E+ VI+ +VD Q
Sbjct: 62 -----------------IDMSDQPLTTQ----------IREQAEVAIDEADVIVLVVDVQ 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE++A L ++ +K ++LAVNK ++P + + +F+SLG P P+S++ G
Sbjct: 95 NGITDADEKVAQLLYRS--NKPVVLAVNKVDNPERR-SDIYDFYSLGLGEPYPVSSVHGI 151
Query: 343 GTGELLDLVCSEL 355
G G+LLD V
Sbjct: 152 GLGDLLDAVIKNF 164
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 39/186 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R +++GRPNVGKS+L N ++G R IV D G TRD + + +F +VDT G+
Sbjct: 177 RFSLIGRPNVGKSSLVNAILGQQRVIVSDIAGTTRDAINTQFVADHRKFTMVDTAGIKKK 236
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K N T A+ R + AI++S V++ +++
Sbjct: 237 GKLYEN-------------------TERYALMR--------SMKAIDDSDVVLVVLNADE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRK---------GIMQVSEFWSLGFSPLP 335
G+ D+ IA + + K +I+ VNK + + + +EF L ++P+
Sbjct: 270 GIRDLDKHIAGYAHE--AGKGVIIVVNKWDLIKNRDHRTMTDFTTLIRNEFQYLSYAPII 327
Query: 336 -ISAIS 340
+SA++
Sbjct: 328 FVSAVT 333
>gi|415718061|ref|ZP_11467123.1| bifunctional cytidylate kinase/GTP-binding protein [Gardnerella
vaginalis 1500E]
gi|388060313|gb|EIK83011.1| bifunctional cytidylate kinase/GTP-binding protein [Gardnerella
vaginalis 1500E]
Length = 730
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/267 (37%), Positives = 124/267 (46%), Gaps = 58/267 (21%)
Query: 105 DFGIDVDALER-----EAKDAVREYSSLLSRQLIIQDETDDRKDSGKKQKKRKTTIGNVP 159
D I+ D +R E D E +LLS L +DE+ D K G
Sbjct: 249 DAAIEQDEYDRYAANLEGYDLDDEDRALLSGDLAGEDESKDTKAVGV------------- 295
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
+A++GRPNVGKS L NR++G A+V D PGVTRDR+ + W F LVDTG
Sbjct: 296 ------IAVIGRPNVGKSTLVNRILGHRVAVVEDTPGVTRDRVSYDAEWAGTNFKLVDTG 349
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G EA V + S I +QA A+ S +IFL
Sbjct: 350 GW------------------------------EADVEGIDSSIAQQAQIAVRLSDAVIFL 379
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISA 338
VDGQ GLTA DE I LR K I LAVNK + R + +EFW LG P ISA
Sbjct: 380 VDGQVGLTATDERIVSMLRA--AGKPITLAVNKVDDARSEYL-TAEFWKLGMGEPHGISA 436
Query: 339 ISGTGTGELLDLVCSELKKVEVCIGFL 365
+ G G G+LLD + LKK GFL
Sbjct: 437 MHGRGVGDLLDAALNSLKKANKTSGFL 463
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 43/79 (54%), Gaps = 12/79 (15%)
Query: 149 KKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRD------RM 202
KK T G + L RVA+VGRPNVGKS+L N L RA+V D G TRD R+
Sbjct: 454 KKANKTSGFLTPQGLRRVALVGRPNVGKSSLLNHLAHEERAVVNDLAGTTRDPVDEVVRV 513
Query: 203 YGRSFWGEHEFMLVDTGGV 221
G +++ +DT G+
Sbjct: 514 DG------EDWLFIDTAGI 526
>gi|89894997|ref|YP_518484.1| GTP-binding protein EngA [Desulfitobacterium hafniense Y51]
gi|122482578|sp|Q24VA2.1|DER_DESHY RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|89334445|dbj|BAE84040.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 441
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 110/193 (56%), Gaps = 33/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNRL GG AIV + PGVTRDR+Y S W +F ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTLFNRLAGGLVAIVENRPGVTRDRLYRDSEWLGRKFTIIDTGGIEF 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
V+++ P + + + RQA AIEE+ VI+F++D Q
Sbjct: 64 VNENTP----------------------------ITAQMRRQAEIAIEEADVIVFVIDAQ 95
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
T D+ IA LR++ K +ILA NK E+ K ++ EF++LG P+PISA+ G
Sbjct: 96 ISPTPDDDMIAQTLRRS--GKPVILAANKVENFAK--TELYEFYNLGLGEPVPISAVHGM 151
Query: 343 GTGELLDLVCSEL 355
G+LLD V S
Sbjct: 152 NIGDLLDEVVSHF 164
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 103/199 (51%), Gaps = 44/199 (22%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHE---FMLVDTGGV 221
R+A+VGRPNVGKS+L N L+G R IV + PG TRD + +F EHE ++++DT G+
Sbjct: 178 RIAVVGRPNVGKSSLVNTLLGEERVIVSNIPGTTRDAI-DSAF--EHEGKHYIIIDTAGM 234
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ +E+L T + +V+R + A++ S VI+ L+D
Sbjct: 235 RRKGR-----IEEL--------------TEQYSVSR--------SLRAVDRSDVILMLLD 267
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----LGF---SP 333
G+T D++IA + + K I+L VNK + K ++ F LGF +P
Sbjct: 268 AGEGVTEQDKKIAGYAHE--AGKGIVLVVNKWDLIEKDDKTMNRFEKDIREELGFMQYAP 325
Query: 334 -LPISAISGTGTGELLDLV 351
L ISA +G +LLDLV
Sbjct: 326 TLFISAKTGQRVTKLLDLV 344
>gi|385799696|ref|YP_005836100.1| ribosome-associated GTPase EngA [Halanaerobium praevalens DSM 2228]
gi|309389060|gb|ADO76940.1| ribosome-associated GTPase EngA [Halanaerobium praevalens DSM 2228]
Length = 438
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/191 (42%), Positives = 109/191 (57%), Gaps = 32/191 (16%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRLVGG RAIV EP VTRDR+YG + W +F ++DTGG+
Sbjct: 6 VAIVGRPNVGKSTLFNRLVGGRRAIVEGEPNVTRDRIYGETEWLGKKFNVIDTGGI---- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
++ D ++ + I+ QA A+EE+ +I+F+VD + G
Sbjct: 62 -----VLHD--------------------NDKIKNQIKYQAEIAMEEADLILFVVDSRTG 96
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGTGT 344
+T DE+IA L + +K +IL VNK E EF+SLGF +P ISA G T
Sbjct: 97 MTGVDEDIAQLLYRT--NKEVILVVNKVEDFSNQEEIGWEFYSLGFGTPFLISAEHGKNT 154
Query: 345 GELLDLVCSEL 355
G+LLD V + L
Sbjct: 155 GQLLDQVKANL 165
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 98/199 (49%), Gaps = 36/199 (18%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+A++G+PNVGKS+L N L+G R IV D PG TRD + W + F +DT G+
Sbjct: 180 IAVIGKPNVGKSSLVNHLIGKKRVIVSDMPGTTRDAVDTMIKWKDISFNFIDTAGL---- 235
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+ + + ED+ + + +A +++ + ++ ++D Q G
Sbjct: 236 RRKSRVKEDVEYYSNL-----------------------RALRSVDRADAVLMMIDAQEG 272
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRK--GIMQVSE---FWSLGF-SPLPISAI 339
+T D++IA + K +++A+NK + K G M ++ L F + +P++ I
Sbjct: 273 VTDQDKKIAGYAHDE--GKAMVIAINKWDLMEKDSGTMDRYTDEVYYQLKFLNYVPVTYI 330
Query: 340 SGTGTGELLDLVCSELKKV 358
S TGE +D + S L+ V
Sbjct: 331 SAL-TGERIDELLSLLEFV 348
>gi|238916971|ref|YP_002930488.1| GTP-binding protein EngA [Eubacterium eligens ATCC 27750]
gi|259645875|sp|C4Z0C8.1|DER_EUBE2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|238872331|gb|ACR72041.1| GTP-binding protein [Eubacterium eligens ATCC 27750]
Length = 441
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 107/193 (55%), Gaps = 32/193 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN L G +IV D PGVTRDR+Y W H F L+DTGG+
Sbjct: 4 PIVAVVGRPNVGKSTLFNSLCGQQISIVKDTPGVTRDRIYAEVSWLNHNFTLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P+ + + S + QA AIE + VIIF+ D +
Sbjct: 62 ----EPDTGDIIL-----------------------SQMREQAEIAIETADVIIFMTDVK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL +D ++AD LR+++ K +IL VNK +S K + V EF++LG P PISA++
Sbjct: 95 QGLVDSDSKVADMLRRSH--KPVILVVNKVDSFEKMMPDVYEFYNLGIGEPFPISAVNKL 152
Query: 343 GTGELLDLVCSEL 355
G GE+LD V S
Sbjct: 153 GFGEVLDEVVSHF 165
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 93/197 (47%), Gaps = 38/197 (19%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P+VAI+G+PNVGKS++ N+LVG NR IV D G TRD + + E++ +DT G+
Sbjct: 178 PKVAIIGKPNVGKSSIINKLVGKNRVIVSDIAGTTRDAIDTAIKYNGKEYVFIDTAGLRR 237
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
SK I EDL + I + AA+E + + I ++D
Sbjct: 238 KSK----IKEDLERFSII-----------------------RTVAAVERADIAILVIDAT 270
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFW-----SLGFSPLP--- 335
G+T D +IA + K II+AVNK + K + EF +L F
Sbjct: 271 EGVTEQDAKIAGIAHER--GKGIIIAVNKWDDIEKNDKTIYEFTNKIKDTLAFMSYAEII 328
Query: 336 -ISAISGTGTGELLDLV 351
+SA +G ++ +LV
Sbjct: 329 FVSAKTGQRLNKIYELV 345
>gi|422847300|ref|ZP_16893983.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK72]
gi|325687138|gb|EGD29161.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK72]
Length = 436
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 112/200 (56%), Gaps = 34/200 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATANWLNRKFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K IILAVNK ++P ++ +F++LG PLP+S++ G
Sbjct: 93 KEGITDADEYVARMLYKTH--KPIILAVNKVDNPEMR-NEIFDFYALGLGDPLPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEVC 361
GTG++LD + L EV
Sbjct: 150 IGTGDVLDAIVENLPNEEVA 169
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 89/197 (45%), Gaps = 39/197 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G R I G TRD + E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEERVIASPVAGTTRDAIDTVFTDSEGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPLP 335
G+ D+ IA + + K I++ VNK ++ K + +F L ++P+
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGIVIVVNKWDTLDKDNHTMKDWEEDIRDQFQYLSYAPII 326
Query: 336 -ISAISGTGTGELLDLV 351
+SA++ +L D++
Sbjct: 327 FVSALTKQRLHKLPDMI 343
>gi|283783291|ref|YP_003374045.1| ribosome-associated GTPase EngA [Gardnerella vaginalis 409-05]
gi|283441128|gb|ADB13594.1| ribosome-associated GTPase EngA [Gardnerella vaginalis 409-05]
Length = 734
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/201 (42%), Positives = 103/201 (51%), Gaps = 34/201 (16%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+AI+GRPNVGKS L NR++G A+V D PGVTRDR+ + W F LVDTGG
Sbjct: 300 IAIIGRPNVGKSTLVNRILGHRVAVVEDTPGVTRDRVSYDAEWAGTNFKLVDTGGW---- 355
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
EA V + S I +QA A+ S +IFLVDGQ G
Sbjct: 356 --------------------------EADVEGIDSSIAQQAQIAVRLSDAVIFLVDGQVG 389
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
LTA DE I LR K I LAVNK + R + +EFW LG P ISA+ G G
Sbjct: 390 LTATDERIVSMLRA--AGKPITLAVNKVDDARSEYL-TAEFWKLGMGEPYGISAMHGRGV 446
Query: 345 GELLDLVCSELKKVEVCIGFL 365
G+LLD + LKK GFL
Sbjct: 447 GDLLDAALNSLKKANKTSGFL 467
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 43/79 (54%), Gaps = 12/79 (15%)
Query: 149 KKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRD------RM 202
KK T G + L RVA+VGRPNVGKS+L N L R++V D G TRD R+
Sbjct: 458 KKANKTSGFLTPEGLRRVALVGRPNVGKSSLLNHLAHEERSVVNDLAGTTRDPVDEVVRV 517
Query: 203 YGRSFWGEHEFMLVDTGGV 221
G +++ +DT G+
Sbjct: 518 DG------EDWLFIDTAGI 530
>gi|104773911|ref|YP_618891.1| GTP-binding protein EngA [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|116513918|ref|YP_812824.1| GTP-binding protein EngA [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|385815548|ref|YP_005851939.1| GTP-binding protein engA [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
gi|418036542|ref|ZP_12674958.1| hypothetical protein LDBUL1519_01658 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
gi|37999708|sp|Q8KH12.1|DER_LACDA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|122275312|sp|Q04AY6.1|DER_LACDB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|21633222|gb|AAM22484.1| conserved hypothetical GTP-binding protein [Lactobacillus
delbrueckii subsp. bulgaricus ATCC 11842]
gi|103422992|emb|CAI97674.1| Putative GTP-binding protein [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|116093233|gb|ABJ58386.1| Predicted GTPase [Lactobacillus delbrueckii subsp. bulgaricus ATCC
BAA-365]
gi|325125585|gb|ADY84915.1| Probable GTP-binding protein engA [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
gi|354687592|gb|EHE87672.1| hypothetical protein LDBUL1519_01658 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
Length = 435
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 114/211 (54%), Gaps = 39/211 (18%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVG+PNVGKS LFNR++ AIV D PGVTRDR Y R+ W H+F ++DTGG+
Sbjct: 3 LPIVAIVGQPNVGKSTLFNRIINERVAIVEDRPGVTRDRNYARASWMGHQFSIIDTGGI- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
ED +TI E I QA AIEE+ VI+ L D
Sbjct: 62 --------TWED----STIDEE-----------------IRAQAEIAIEEADVIVMLADA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
G+T+ DE IA L + DK ++LAVNK ++P + + +F+SLG P+P+S G
Sbjct: 93 SQGVTSLDERIAHLLYR--ADKPVLLAVNKADNPEQR-TDIYDFYSLGLGDPIPVSGSHG 149
Query: 342 TGTGELLDLVCSEL-----KKVEVCIGFLLI 367
TG G+LLD V K E I F +I
Sbjct: 150 TGIGDLLDEVVKNFSPDAEKTEEGVISFSVI 180
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 93/195 (47%), Gaps = 40/195 (20%)
Query: 167 AIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSK 226
+++GRPNVGKS++ NRL+G R IV +E G TRD + +F +VDT G+ K
Sbjct: 178 SVIGRPNVGKSSIVNRLLGEERVIVANEEGTTRDAIDTPFVKDGTKFRVVDTAGIRRRGK 237
Query: 227 SQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGL 286
+ T + +V R A +A+E S V I ++D G+
Sbjct: 238 -------------------VYEKTEKYSVMR--------AMSAMERSDVAILVLDASTGI 270
Query: 287 TAADEEIADWLRKNYMDKFIILAVNKCESPRK---------GIMQVSEFWSLGFSPLP-I 336
D+ +A + + + +I+AVNK + P+K +++ EF L ++P+ +
Sbjct: 271 REQDKHVAGYAHEAGLG--MIIAVNKWDLPKKDSSSGKDFEAVIR-EEFSYLDYAPIVFV 327
Query: 337 SAISGTGTGELLDLV 351
SA +G +L +V
Sbjct: 328 SAKTGKNIDQLPKMV 342
>gi|416358981|ref|ZP_11682285.1| GTP-binding protein Der, partial [Clostridium botulinum C str.
Stockholm]
gi|338194660|gb|EGO87066.1| GTP-binding protein Der [Clostridium botulinum C str. Stockholm]
Length = 387
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 112/193 (58%), Gaps = 33/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L G AIV D PGVTRDR+Y ++ W ++F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAGKRIAIVDDMPGVTRDRIYAQAEWLNNKFTIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P + + VA+M RQA AIE + V++F+VDG+
Sbjct: 62 ----EPE-------------------SEDVIVAQM----RRQAQMAIEMADVVLFIVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL AD E+A LRK +K I+LAVNK + R+ + EF++LG P+ ISA G
Sbjct: 95 QGLADADREVAQMLRK--ANKSIVLAVNKIDR-RQLDDNIYEFYNLGLGDPMAISASQGL 151
Query: 343 GTGELLDLVCSEL 355
G G+LLD V +
Sbjct: 152 GLGDLLDEVVDKF 164
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 92/195 (47%), Gaps = 38/195 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R+A+VGRPNVGKS+L NR++G + IV + PG TRD + E +F L+DT G+
Sbjct: 178 RIAMVGRPNVGKSSLINRILGEEKHIVSNIPGTTRDSVDSYIEREEGKFALIDTAGLRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK + + A+ T A+IE + V I ++D +
Sbjct: 238 SKIKEQVERYSAVRT---------------------------IASIENADVCILMLDAEQ 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF-----WSLGFSP----LP 335
G+ DE+I + + ++K II+ VNK + K + F + L F P L
Sbjct: 271 GIAEQDEKIIGYAHE--LNKAIIVIVNKWDLIEKDDKTMKNFKDKLRYELSFLPYASFLF 328
Query: 336 ISAISGTGTGELLDL 350
ISA +G ++L +
Sbjct: 329 ISAKTGQRVNKVLGM 343
>gi|150390617|ref|YP_001320666.1| GTP-binding protein EngA [Alkaliphilus metalliredigens QYMF]
gi|166920095|sp|A6TS39.1|DER_ALKMQ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|149950479|gb|ABR49007.1| small GTP-binding protein [Alkaliphilus metalliredigens QYMF]
Length = 440
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 110/193 (56%), Gaps = 33/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+++G +IV D+PGVTRDR+Y W +H F L+DTGG
Sbjct: 4 PIVAIVGRPNVGKSTLFNKIIGHRISIVEDQPGVTRDRIYAEVEWLDHYFTLIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I T E +P+ + QA AIE + V +F+VDG+
Sbjct: 61 ----------------------IDADTEEI----IPAQMREQAQLAIETADVTVFMVDGR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
AGLT +D E+A+ LRK++ K ++LA+NK ++ + + EF+ LG P+ IS+ G
Sbjct: 95 AGLTTSDREVAEMLRKSH--KPVLLAMNKVDTSNR-LDSFYEFYELGIGDPIEISSAQGL 151
Query: 343 GTGELLDLVCSEL 355
G G+LLD +
Sbjct: 152 GIGDLLDEIVKHF 164
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VAI+G+PNVGKS++ N ++G NR IV D G TRD + GE +++L+DT G+
Sbjct: 178 KVAIIGKPNVGKSSIVNSILGENRVIVSDIAGTTRDAIDTPFNDGEDQYVLIDTAGLRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK + NI E ++ +I AA+E + V + ++D
Sbjct: 238 SKIKENI-EKYSVIRSI--------------------------AAVERADVCLLVIDATE 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCE-------SPRKGIMQV-SEFWSLGFSP-LP 335
G+T D ++A + +N K I+ VNK + + K I ++ +E L ++P L
Sbjct: 271 GVTEQDTKVAGFSHEN--GKGTIIVVNKWDLIEKDNNTMNKFIKEIRTELAYLSYAPILF 328
Query: 336 ISAISGTGTGELLDLV 351
ISA++ ++L+ V
Sbjct: 329 ISALTRQRMPKVLETV 344
>gi|424788271|ref|ZP_18215030.1| ribosome-associated GTPase EngA [Streptococcus intermedius BA1]
gi|422113035|gb|EKU16792.1| ribosome-associated GTPase EngA [Streptococcus intermedius BA1]
Length = 436
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/200 (40%), Positives = 110/200 (55%), Gaps = 34/200 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS FNR+ G +IV D GVTRDR+Y + W +F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTFFNRIAGERISIVEDVEGVTRDRIYATAEWLNRKFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIRHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K IILAVNK ++P ++ +F++LG P P+S+I G
Sbjct: 93 KEGITDADEYVARMLYKTH--KPIILAVNKVDNPEMR-SEIFDFYALGLGEPYPVSSIHG 149
Query: 342 TGTGELLDLVCSELKKVEVC 361
GTG++LD + L K EV
Sbjct: 150 IGTGDVLDAIVENLPKEEVV 169
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 91/197 (46%), Gaps = 39/197 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G R I G TRD + E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEERVIASPVAGTTRDAIDTVFTDSEGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK--GIMQV------SEFWSLGFSPLP 335
G+ D+ IA + + K II+ VNK ++ K MQ ++F L ++P+
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGIIIVVNKWDTLEKDNKTMQTWEADIRNQFQYLSYAPII 326
Query: 336 -ISAISGTGTGELLDLV 351
+SA++ +L D++
Sbjct: 327 FVSALTKQRLHKLPDMI 343
>gi|304406963|ref|ZP_07388617.1| ribosome-associated GTPase EngA [Paenibacillus curdlanolyticus YK9]
gi|304343950|gb|EFM09790.1| ribosome-associated GTPase EngA [Paenibacillus curdlanolyticus YK9]
Length = 440
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 113/193 (58%), Gaps = 33/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNR++G AIV D+PGVTRDR+YG W F +VDTGG+
Sbjct: 4 PVIAIVGRPNVGKSTIFNRVIGDRLAIVEDKPGVTRDRIYGTGEWNGRAFSIVDTGGIE- 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ IM+ + RM QA A+EE+ VIIF+VD +
Sbjct: 63 -IDGEDEIMKSV---------------------RM------QAELAVEEADVIIFMVDAK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGT 342
AG+T AD+E+A L ++ K I++AVNK ++ + + V EF+ LGF +P+ IS GT
Sbjct: 95 AGMTHADDEVAQMLFRSR--KPIVVAVNKVDNFNR-MDDVYEFYGLGFGTPVAISGSHGT 151
Query: 343 GTGELLDLVCSEL 355
G G+LLD +L
Sbjct: 152 GIGDLLDAAVEKL 164
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
RVA++GRPNVGKS+L N ++G R IV D G TRD + ++L+DT G+
Sbjct: 178 RVALIGRPNVGKSSLVNAILGEERVIVSDVAGTTRDAIDTPFEKDGQRYVLIDTAGM--- 234
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E T + +V R + AIE + V++ L++G+
Sbjct: 235 -RKRGKVYE---------------TTEKYSVMR--------SLKAIERADVVLILINGEE 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ IA + + K I VNK ++ + +S F
Sbjct: 271 GIIEQDKHIAGYAHE--AGKASIFVVNKWDAVERDEKTMSHF 310
>gi|386723501|ref|YP_006189827.1| GTP-binding protein Der [Paenibacillus mucilaginosus K02]
gi|384090626|gb|AFH62062.1| GTP-binding protein Der [Paenibacillus mucilaginosus K02]
Length = 440
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 111/193 (57%), Gaps = 33/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNR++G AIV D+PGVTRDR+YGR W + EF ++DTGG
Sbjct: 4 PVIAIVGRPNVGKSTIFNRIIGDKLAIVEDKPGVTRDRLYGRGEWLDQEFSIIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I +EG R V QA AIEE+ VIIF+VD +
Sbjct: 61 -----------------IEIEGEDHILRSVRV---------QAELAIEEADVIIFMVDAK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGT 342
AG+T AD E+A L ++ K +++AVNK ++ ++ + EF+S+GF + IS GT
Sbjct: 95 AGVTPADSEVAQILFRS--QKPVVVAVNKVDNLQRA-DDIYEFYSMGFGEIVGISGAHGT 151
Query: 343 GTGELLDLVCSEL 355
G G+LL+ V
Sbjct: 152 GIGDLLEEVVKHF 164
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 81/178 (45%), Gaps = 37/178 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
RVA++GRPNVGKS+L N ++G R IV D G TRD + +++++DT G+
Sbjct: 178 RVALIGRPNVGKSSLVNAILGEERVIVSDMAGTTRDAIDTPFEKDGQKYVIIDTAGMRKR 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K N T + +V R A AIE + V++ ++DG+
Sbjct: 238 GKVYEN-------------------TEKYSVMR--------AMKAIERADVVLVVIDGEV 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSE-----FWSLGFSPL 334
G+ D+ +A + + K + VNK E K + Q + F + ++P+
Sbjct: 271 GIIEQDKHVAGYAHE--AGKAAVFVVNKWDIVEKDEKTMHQFEQKIRDHFLFMTYAPV 326
>gi|379720895|ref|YP_005313026.1| protein EngA [Paenibacillus mucilaginosus 3016]
gi|378569567|gb|AFC29877.1| EngA [Paenibacillus mucilaginosus 3016]
Length = 440
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 111/193 (57%), Gaps = 33/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNR++G AIV D+PGVTRDR+YGR W + EF ++DTGG
Sbjct: 4 PVIAIVGRPNVGKSTIFNRIIGDKLAIVEDKPGVTRDRLYGRGEWLDQEFSIIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I +EG R V QA AIEE+ VIIF+VD +
Sbjct: 61 -----------------IEIEGEDHILRSVRV---------QAELAIEEADVIIFMVDAK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGT 342
AG+T AD E+A L ++ K +++AVNK ++ ++ + EF+S+GF + IS GT
Sbjct: 95 AGVTPADSEVAQILFRS--QKPVVVAVNKVDNLQRA-DDIYEFYSMGFGEIVGISGAHGT 151
Query: 343 GTGELLDLVCSEL 355
G G+LL+ V
Sbjct: 152 GIGDLLEEVVKHF 164
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
RVA++GRPNVGKS+L N ++G R IV D G TRD + +++++DT G+
Sbjct: 178 RVALIGRPNVGKSSLVNAILGEERVIVSDMAGTTRDAIDTPFEKDGQKYVIIDTAGMRKR 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K N T + +V R A AIE + V++ ++DG+
Sbjct: 238 GKVYEN-------------------TEKYSVMR--------AMKAIERADVVLVVIDGEV 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ +A + + K + VNK + K + +F
Sbjct: 271 GIIEQDKHVAGYAHE--AGKAAVFVVNKWDVVEKDEKTMHQF 310
>gi|424834977|ref|ZP_18259649.1| GTP-binding protein Der [Clostridium sporogenes PA 3679]
gi|365978337|gb|EHN14428.1| GTP-binding protein Der [Clostridium sporogenes PA 3679]
Length = 439
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/194 (43%), Positives = 108/194 (55%), Gaps = 33/194 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L G AIV D PGVTRDR+Y + W ++F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAGKRIAIVQDTPGVTRDRIYAEAEWLNYKFTMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P ED+ I S + RQA AIE + VIIFLVDG+
Sbjct: 62 ----EPE-SEDIII----------------------SQMRRQAQIAIEMANVIIFLVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL ADEE+A LRK+ K ++L VNK + K EF++LG P+ IS+
Sbjct: 95 EGLAPADEEVAQMLRKS--KKPVVLVVNKIDKL-KDEDNAYEFYNLGIGDPITISSSQAL 151
Query: 343 GTGELLDLVCSELK 356
G G++LD V K
Sbjct: 152 GLGDMLDRVVEHFK 165
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 33/151 (21%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRM--YGRSFWGEHEFMLVDTGGVLN 223
+A VG+PNVGKS+L N+L+G R IV + PG TRD + Y + +G EF L+DT G+
Sbjct: 179 IAFVGKPNVGKSSLINKLLGEERLIVSNIPGTTRDSIDSYVNTDFG--EFTLIDTAGLRR 236
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
SK + I I T A+IE + V I ++D
Sbjct: 237 KSKVKEEIERYSVIRT---------------------------YASIERADVCILMIDAT 269
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
G++ D++I + ++K I++ VNK +
Sbjct: 270 EGISEQDQKIIGYAHD--LNKAILVIVNKWD 298
>gi|386714590|ref|YP_006180913.1| GTP-binding protein EngA [Halobacillus halophilus DSM 2266]
gi|384074146|emb|CCG45639.1| GTP-binding protein EngA [Halobacillus halophilus DSM 2266]
Length = 436
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/189 (42%), Positives = 108/189 (57%), Gaps = 34/189 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+AIVGRPNVGKS +FNRLVG +IV D PGVTRDR+Y W F ++DTGG+
Sbjct: 6 MAIVGRPNVGKSTIFNRLVGERISIVEDTPGVTRDRIYAEGEWLNERFNVIDTGGI---- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+G E + + RE QA AI+E+ VI+F+V+G+ G
Sbjct: 62 --------------ELGDEPLLVQMRE------------QAQVAIDEADVIVFMVNGRDG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+T ADEE+A L K+ +K ++LAVNK ++P + EF+SLGF P PIS G G
Sbjct: 96 ITGADEEVAKILYKS--NKPVVLAVNKVDNPEMR-ENIYEFYSLGFGEPHPISGTHGLGL 152
Query: 345 GELLDLVCS 353
G++LD V
Sbjct: 153 GDMLDEVVK 161
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 76/151 (50%), Gaps = 29/151 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R +++GRPNVGKS+L N L+G R IV D G TRD + + +++++DT G+
Sbjct: 177 RFSVIGRPNVGKSSLVNTLLGQERVIVSDIAGTTRDAIDTPFSKDDRDYVIIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + I E AT + ++ R A AIE S V++ L+D
Sbjct: 234 -RKRGKIYE---------------ATEKYSIMR--------AMKAIERSDVVLSLIDADT 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCES 315
G+ D++IA + + K +I+ VNK ++
Sbjct: 270 GIQEQDKKIAGYAHE--AGKAVIIVVNKWDT 298
>gi|167037254|ref|YP_001664832.1| GTP-binding protein EngA [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|256752010|ref|ZP_05492879.1| small GTP-binding protein [Thermoanaerobacter ethanolicus CCSD1]
gi|320115673|ref|YP_004185832.1| ribosome-associated GTPase EngA [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|238687651|sp|B0K8N3.1|DER_THEP3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|166856088|gb|ABY94496.1| small GTP-binding protein [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|256749120|gb|EEU62155.1| small GTP-binding protein [Thermoanaerobacter ethanolicus CCSD1]
gi|319928764|gb|ADV79449.1| ribosome-associated GTPase EngA [Thermoanaerobacter brockii subsp.
finnii Ako-1]
Length = 439
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 116/196 (59%), Gaps = 32/196 (16%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
V+IVGRPNVGKS LFN+++G +IV D+PGVTRDR+YG W + +F+LVDTGG+
Sbjct: 6 VSIVGRPNVGKSTLFNKIMGKRISIVEDKPGVTRDRIYGNVEWLDKKFILVDTGGL---- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
PN ED+ + S + Q AAI+ S VI+FLVD + G
Sbjct: 62 --DPN-AEDI----------------------LFSKVRLQVEAAIDASDVILFLVDAKEG 96
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGTGT 344
L DEEIA+ LR+ K +IL NK +S ++ +F+SLG +P+PISA +G G
Sbjct: 97 LMPEDEEIANILRR--AKKEVILVCNKVDSFKEMPPTYYDFFSLGLGNPIPISASNGLGI 154
Query: 345 GELLDLVCSELKKVEV 360
GELLD V +L + E+
Sbjct: 155 GELLDEVVKKLPQEEL 170
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 104/228 (45%), Gaps = 46/228 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++A++G+PNVGKS+L N+++G R IV + PG TRD + ++L+DT G+
Sbjct: 178 KIAVIGKPNVGKSSLVNKILGEERVIVSNIPGTTRDAIDTPFSKDGKNYVLIDTAGIRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIER----QATAAIEESCVIIFLV 280
S R+ IER +A AAIE S + + ++
Sbjct: 238 S-------------------------------RISESIERYSVLRALAAIERSDICLLMI 266
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSL--------GFS 332
D G T D +IA + +N K II+ VNK ++ +K V+E+ + F+
Sbjct: 267 DATEGPTEQDTKIAGYAFEN--GKGIIIVVNKWDAIKKDNNTVNEYTKMVREKLSFISFA 324
Query: 333 P-LPISAISGTGTGELLDLVCSELKKVEVCIGFLLICNAITKIFHIIP 379
P L ISA +G +L+ V ++ I L+ N + + + P
Sbjct: 325 PILFISAKTGQRVHRVLETVDKVWEEYNKRITTGLLNNVLNEAMLMFP 372
>gi|365904011|ref|ZP_09441770.1| GTP-binding protein Der [Lactobacillus versmoldensis KCTC 3814]
Length = 437
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 109/192 (56%), Gaps = 34/192 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
+P VA+VGRPNVGKS +FNR++ +IV D PGVTRDR+Y R+ W EF L+DTGG
Sbjct: 3 VPVVALVGRPNVGKSTIFNRIINERLSIVEDTPGVTRDRIYARASWLGKEFRLIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I M PL + I+ QA AI+E+ VI+F+V+G
Sbjct: 61 ------------------IDMSDEPLTVQ----------IKNQAEIAIDEADVIVFIVNG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q +T DE++A L + K IILAVNK ++P + + +F++LGF P P+S G
Sbjct: 93 QNSVTKEDEDVAKILYRT--KKPIILAVNKADNPEQR-ENIYDFYALGFGDPNPVSGSQG 149
Query: 342 TGTGELLDLVCS 353
TG G+LLD +
Sbjct: 150 TGIGDLLDEIVK 161
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 92/200 (46%), Gaps = 40/200 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSF--WGEHEFMLVDTGGVL 222
+ + +GRPNVGKS+L N ++G R IV + G TRD + + F E +F ++DT G+
Sbjct: 176 KFSFIGRPNVGKSSLVNAILGDERVIVSNIQGTTRDAIDTKYFDERLEKDFTMIDTAGIR 235
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A +AI++S V+ +++
Sbjct: 236 KRGKVYEN-------------------TEKYSVLR--------ALSAIDKSDVVCVVLNA 268
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSP- 333
+ G+ D+ +A + K +I+ VNK ++ +K + +F L ++P
Sbjct: 269 EEGIREQDKRVAGYAHN--AGKGVIIVVNKWDALKKDTHTMRDFENVIRDQFQYLSYAPI 326
Query: 334 LPISAISGTGTGELLDLVCS 353
L SA+ G ++ +LV
Sbjct: 327 LFTSAVKGQRLEQIPELVSK 346
>gi|421859201|ref|ZP_16291440.1| predicted GTPase [Paenibacillus popilliae ATCC 14706]
gi|410831266|dbj|GAC41877.1| predicted GTPase [Paenibacillus popilliae ATCC 14706]
Length = 440
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 111/193 (57%), Gaps = 33/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR++G AIV D+PGVTRDR+YG W F ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRVIGDRLAIVEDKPGVTRDRIYGTGEWNGKPFSIIDTGGIEV 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ + M I QA AIEE+ VI+F+ + +
Sbjct: 64 YGEDE-----------------------------MLRSIRVQAELAIEEADVIVFMCEAK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
+G+T ADEE+A+ L ++ K ++LA+NK ++ ++ + V EF+SLGF P+PIS GT
Sbjct: 95 SGVTQADEEVAEILFRSA--KPVVLAINKVDNLQR-MDDVYEFYSLGFGDPVPISGSHGT 151
Query: 343 GTGELLDLVCSEL 355
G G+LLD V
Sbjct: 152 GLGDLLDEVVHRF 164
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
RVA++GRPNVGKS+L N ++G +R IV D G TRD + F+L+DT G+
Sbjct: 178 RVALIGRPNVGKSSLVNAILGEDRVIVSDIAGTTRDAIDTPFEKDGQRFVLIDTAGM--- 234
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E T + +V R + AIE + V++ +++G+
Sbjct: 235 -RKRGKVYE---------------TTEKYSVMR--------SMKAIERADVVLVVINGEE 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ IA + + K + VNK + K + EF
Sbjct: 271 GIIEQDKHIAGY--ADEAGKAALFIVNKWDVVEKNDRTMHEF 310
>gi|253682586|ref|ZP_04863383.1| ribosome-associated GTPase EngA [Clostridium botulinum D str. 1873]
gi|253562298|gb|EES91750.1| ribosome-associated GTPase EngA [Clostridium botulinum D str. 1873]
Length = 438
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 112/193 (58%), Gaps = 33/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L G AIV D PGVTRDR+Y ++ W ++F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAGKRIAIVDDMPGVTRDRIYAQAEWLNNKFTIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P + + VA+M RQA AIE + V++F+VDG+
Sbjct: 62 ----EPE-------------------SEDVIVAQM----RRQAQMAIEMADVVLFIVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL AD E+A LRK +K I+LAVNK + R+ + EF++LG P+ ISA G
Sbjct: 95 QGLADADREVAQMLRK--ANKSIVLAVNKIDR-RQLDDNIYEFYNLGLGDPMAISASQGL 151
Query: 343 GTGELLDLVCSEL 355
G G+LLD V +
Sbjct: 152 GLGDLLDEVVDKF 164
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 92/195 (47%), Gaps = 38/195 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R+A+VGRPNVGKS+L NR++G + IV + PG TRD + E +F L+DT G+
Sbjct: 178 RIAMVGRPNVGKSSLINRILGEEKHIVSNIPGTTRDSVDSYIEREEGKFALIDTAGLRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK + + A+ T A+IE + V I ++D +
Sbjct: 238 SKIKEQVERYSAVRT---------------------------IASIENADVCILMLDAEQ 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF-----WSLGFSP----LP 335
G+ DE+I + + ++K II+ VNK + K + F + L F P L
Sbjct: 271 GIAEQDEKIIGYAHE--LNKAIIVIVNKWDLIEKDDKTMKNFKDKLRYELSFLPYASFLF 328
Query: 336 ISAISGTGTGELLDL 350
ISA +G ++L +
Sbjct: 329 ISAKTGQRVNKVLGM 343
>gi|150016018|ref|YP_001308272.1| GTP-binding protein EngA [Clostridium beijerinckii NCIMB 8052]
gi|189037141|sp|A6LSI6.1|DER_CLOB8 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|149902483|gb|ABR33316.1| small GTP-binding protein [Clostridium beijerinckii NCIMB 8052]
Length = 438
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/195 (42%), Positives = 108/195 (55%), Gaps = 33/195 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L G +IV D PGVTRDR+Y + W + F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAGKRISIVQDTPGVTRDRVYAEAEWLRYNFTMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P D+ I + RQA AIE + VIIF+VDG+
Sbjct: 62 ----EPE-NNDIII----------------------KQMRRQANIAIETADVIIFIVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLTAAD E+A LRK+ K ++L VNK ++ K EF++LG P+ ISA G
Sbjct: 95 EGLTAADNEVATMLRKS--KKPVVLVVNKVDNL-KDENNAYEFYNLGIGDPMAISAGQGL 151
Query: 343 GTGELLDLVCSELKK 357
G G++LD V K
Sbjct: 152 GLGDMLDEVVKHFDK 166
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 98/212 (46%), Gaps = 40/212 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R+A++G+PNVGKS+L N+L+G R IV D PG TRD + E +F+LVDT G+
Sbjct: 178 RIAMIGKPNVGKSSLINKLLGEERVIVSDIPGTTRDSIDSHLETEEGKFILVDTAGLRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK + I I T AAIE + V I ++D
Sbjct: 238 SKVKEEIERYSVIRT---------------------------YAAIERADVCILMIDATE 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFW-----SLGF----SPLP 335
G+T DE+I + + + K I++ VNK + K + +F +L F L
Sbjct: 271 GITEQDEKIIGYAHE--LRKAIMVIVNKWDLVEKDDKTLDKFKKDLQSNLKFLSYAEYLF 328
Query: 336 ISAISGTGTGELLDLV--CSELKKVEVCIGFL 365
ISA++G T ++L L C + + G L
Sbjct: 329 ISALTGQRTNKVLKLARYCYDNYNKRISTGIL 360
>gi|182418977|ref|ZP_02950233.1| GTP-binding protein EngA [Clostridium butyricum 5521]
gi|237668464|ref|ZP_04528448.1| ribosome-associated GTPase EngA [Clostridium butyricum E4 str. BoNT
E BL5262]
gi|182377260|gb|EDT74828.1| GTP-binding protein EngA [Clostridium butyricum 5521]
gi|237656812|gb|EEP54368.1| ribosome-associated GTPase EngA [Clostridium butyricum E4 str. BoNT
E BL5262]
Length = 438
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 108/193 (55%), Gaps = 33/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFNRL G +IV D PGVTRDR+Y + W H F ++DTGG+
Sbjct: 4 PIVAMVGRPNVGKSTLFNRLAGKRISIVQDTPGVTRDRVYAEAEWLTHTFTMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P D+ + + RQA AIE + VI+F+VDG+
Sbjct: 62 ----EPE-RNDIIV----------------------QQMRRQANIAIETADVIVFIVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLTAAD E+A LRK+ K ++L VNK +S ++ EF++LG P+ ISA G
Sbjct: 95 EGLTAADHEVATMLRKS--KKPVVLVVNKVDSLKEE-DNAWEFYNLGIGDPITISASQGL 151
Query: 343 GTGELLDLVCSEL 355
G G++LD V
Sbjct: 152 GLGDMLDRVVENF 164
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 99/212 (46%), Gaps = 40/212 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R+A++G+PNVGKS+L N+L+G +R IV + G TRD + E +F+L+DT G+
Sbjct: 178 RIAMIGKPNVGKSSLINKLLGEDRVIVSEVAGTTRDAIDSELETEEGKFILIDTAGLRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK + I E ++ T AAIE S V I ++D Q
Sbjct: 238 SKVKEEI-ERYSVVRTY--------------------------AAIERSDVCILMIDAQE 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF-----WSLGF----SPLP 335
G+T DE+I + + M K I++ VNK + K + F L F L
Sbjct: 271 GITEQDEKIIGYAHE--MRKAIMIIVNKWDLVEKDDKTLDNFKRDLQGKLKFINYAEYLF 328
Query: 336 ISAISGTGTGELLDLV--CSELKKVEVCIGFL 365
ISA++G T ++L + C + V G L
Sbjct: 329 ISALTGQRTHKVLQMARKCYDNYNKRVSTGIL 360
>gi|335357281|ref|ZP_08549151.1| GTP-binding protein Der [Lactobacillus animalis KCTC 3501]
Length = 436
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/195 (42%), Positives = 108/195 (55%), Gaps = 34/195 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y +S W F L+DTGG
Sbjct: 4 PVVAIVGRPNVGKSTVFNRIAGERISIVEDTPGVTRDRIYAKSEWLGQPFNLIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I M P + I QA AI+E+ VI+F+ +
Sbjct: 61 -----------------IDMGDEPFL----------AQITEQAQIAIDEADVIVFVTSVK 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE++A L + DK +ILAVNK ++P ++ +F+SLGF P+P+S G
Sbjct: 94 EGVTDADEKVAKILYRT--DKPVILAVNKVDNPELR-SEIYDFYSLGFGDPMPLSGTHGI 150
Query: 343 GTGELLDLVCSELKK 357
GTG+LLD VC K
Sbjct: 151 GTGDLLDKVCQAFPK 165
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 32/164 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEH--EFMLVDTGGVL 222
+ + +GRPNVGKS+L N ++G NR IV + G TRD + F E EF ++DT G+
Sbjct: 176 KFSFIGRPNVGKSSLVNAILGENRVIVSNVEGTTRDAI-DTKFVAEDGTEFTMIDTAGIR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A AI+ S V+ +++
Sbjct: 235 KKGKVYEN-------------------TEKYSVLR--------AMRAIDRSDVVCVVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
+ G+ D+ +A + + + II+ VNK ++ +K + EF
Sbjct: 268 EEGIREQDKHVAGYAHE--AGRGIIIVVNKWDTLKKDNHTMKEF 309
>gi|187778884|ref|ZP_02995357.1| hypothetical protein CLOSPO_02479 [Clostridium sporogenes ATCC
15579]
gi|187772509|gb|EDU36311.1| ribosome biogenesis GTPase Der [Clostridium sporogenes ATCC 15579]
Length = 439
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/194 (43%), Positives = 108/194 (55%), Gaps = 33/194 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L G AIV D PGVTRDR+Y + W ++F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAGKRIAIVQDTPGVTRDRIYAEAEWLNYKFTMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P ED+ I S + RQA AIE + VIIFLVDG+
Sbjct: 62 ----EPE-SEDIII----------------------SQMRRQAQIAIEMANVIIFLVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL ADEE+A LRK+ K ++L VNK + K EF++LG P+ IS+
Sbjct: 95 EGLAPADEEVAQMLRKS--KKPVVLVVNKIDKL-KDEDNAYEFYNLGIGDPVTISSSQAL 151
Query: 343 GTGELLDLVCSELK 356
G G++LD V K
Sbjct: 152 GLGDMLDRVVEHFK 165
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 33/151 (21%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRM--YGRSFWGEHEFMLVDTGGVLN 223
+A VG+PNVGKS+L N+L+G R IV + PG TRD + Y + +G EF L+DT G+
Sbjct: 179 IAFVGKPNVGKSSLINKLLGEERLIVSNIPGTTRDSIDSYVNTDFG--EFTLIDTAGLRR 236
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
SK + I I T A+IE + V I ++D
Sbjct: 237 KSKVKEEIERYSVIRT---------------------------YASIERADVCILMIDAT 269
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
G++ D++I + ++K I++ VNK +
Sbjct: 270 EGISEQDQKIIGYAHD--LNKAILVIVNKWD 298
>gi|315924473|ref|ZP_07920695.1| ribosome-associated GTPase EngA [Pseudoramibacter alactolyticus
ATCC 23263]
gi|315622352|gb|EFV02311.1| ribosome-associated GTPase EngA [Pseudoramibacter alactolyticus
ATCC 23263]
Length = 440
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/190 (42%), Positives = 109/190 (57%), Gaps = 33/190 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VG+PNVGKS LFN+LVG AIV + PGVTRDR+ + W H F L+DTGG+
Sbjct: 3 PIVAVVGKPNVGKSTLFNKLVGERIAIVENTPGVTRDRIIADAEWQNHRFTLIDTGGI-- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K+ IM + + QA AIE + +I+ L DG+
Sbjct: 61 ELKTGNTIMHQMRV---------------------------QAEIAIETADLILLLCDGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TAADE++AD LRK + K +I+ VNK +S K ++ EF++LG PLPISA G
Sbjct: 94 EGMTAADEDVADMLRKQH--KKVIVVVNKLDSV-KLEERLYEFYNLGLGDPLPISAEQGL 150
Query: 343 GTGELLDLVC 352
G G+LLD +
Sbjct: 151 GLGDLLDAIV 160
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 91/195 (46%), Gaps = 38/195 (19%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+A+VG+PN GKS L N+L+G NR IV D PG TRD + + G E+ +DT G+ S
Sbjct: 179 IAVVGKPNAGKSTLVNQLIGENRMIVSDIPGTTRDAIDSKIERGGVEYTFIDTAGLRRKS 238
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
K I +++ + I +A AA++ + V++ +V+ Q G
Sbjct: 239 K----IADEVERYSII-----------------------RAIAAVDRADVVLMMVNAQTG 271
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFW-----SLGFSP----LPI 336
+T D +IA ++ I+ VNK + K + + SL F P L I
Sbjct: 272 VTEQDSKIAGIAHNRFIPTIIV--VNKWDLIEKDTKTMQKMTGDIRNSLAFMPYAPMLFI 329
Query: 337 SAISGTGTGELLDLV 351
SA +G ++ D +
Sbjct: 330 SAKTGKRAEKIYDKI 344
>gi|221632763|ref|YP_002521985.1| GTP-binding protein EngA [Thermomicrobium roseum DSM 5159]
gi|254783175|sp|B9KZ43.1|DER_THERP RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|221155859|gb|ACM04986.1| ribosome-associated GTPase EngA [Thermomicrobium roseum DSM 5159]
Length = 460
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/198 (41%), Positives = 111/198 (56%), Gaps = 27/198 (13%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP+VAIVGRPNVGKS LFNRL+ RAIV + PG TRDR+YG W + F L DTGG+L
Sbjct: 3 LPQVAIVGRPNVGKSTLFNRLLRQRRAIVEEVPGTTRDRIYGIVEWNDLRFGLFDTGGLL 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + + +L T + QA AI E+ ++IF+VD
Sbjct: 63 TEEEIERSSERELVEAT-----------------------KAQAELAIAEADLVIFVVDA 99
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
AG TA D E+AD+LR+ DK I+L NK ES R+ +F+ LG P+P+SA+ G
Sbjct: 100 SAGPTAGDWEVADFLRRT--DKPILLVANKAES-REREFNALQFYELGLGDPIPVSALHG 156
Query: 342 TGTGELLDLVCSELKKVE 359
G +LLD + L + E
Sbjct: 157 RGIADLLDAIAERLPRRE 174
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 69/161 (42%), Gaps = 49/161 (30%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P++AIVGRPNVGKSAL N ++G R IV PG TRD + W +L+DT G+
Sbjct: 184 PKIAIVGRPNVGKSALLNAILGQPRQIVSPIPGTTRDAVDTELVWKGQPIVLIDTAGI-- 241
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIER--------QATAAIEESCV 275
R P IER +A AIE S V
Sbjct: 242 ---------------------------------RRPGRIERGIERYSILRAERAIERSDV 268
Query: 276 IIFLVDGQAGLTAADEEIADWLRKNYMD--KFIILAVNKCE 314
I +VD T D+ +A +D K I++A+NK +
Sbjct: 269 AILVVDATEPFTHQDQAVAG----KVLDAKKGIVVAINKWD 305
>gi|374605722|ref|ZP_09678640.1| GTP-binding protein Der [Paenibacillus dendritiformis C454]
gi|374388717|gb|EHQ60121.1| GTP-binding protein Der [Paenibacillus dendritiformis C454]
Length = 440
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 111/193 (57%), Gaps = 33/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR++G AIV D+PGVTRDR+YG W F ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRVIGDRLAIVEDKPGVTRDRIYGTGEWNGKPFNVIDTGGIEV 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ + M I QA AIEE+ VI+F+ + +
Sbjct: 64 YGEDE-----------------------------MLRSIRVQAELAIEEADVIVFMCEAK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
+G+T ADEE+A+ L ++ K ++LA+NK ++ ++ + V EF+SLGF P+PIS GT
Sbjct: 95 SGVTQADEEVAEILFRS--GKPVVLAINKVDNLQR-MDDVYEFYSLGFGDPVPISGSHGT 151
Query: 343 GTGELLDLVCSEL 355
G G+LLD V
Sbjct: 152 GLGDLLDEVVHRF 164
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
RVA++GRPNVGKS+L N ++G +R IV D G TRD + F+L+DT G+
Sbjct: 178 RVALIGRPNVGKSSLVNAILGEDRVIVSDIAGTTRDAIDTPFEKDGQRFVLIDTAGM--- 234
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E T + +V R + AIE + V++ +++G+
Sbjct: 235 -RKRGKVYE---------------TTEKYSVMR--------SMKAIERADVVLVVINGEE 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ IA + + K + VNK + K + EF
Sbjct: 271 GIIEQDKHIAGYAHE--AGKAALFVVNKWDVVEKNDRTMHEF 310
>gi|189502515|ref|YP_001958232.1| GTP-binding protein EngA [Candidatus Amoebophilus asiaticus 5a2]
gi|238692314|sp|B3ETF1.1|DER_AMOA5 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|189497956|gb|ACE06503.1| hypothetical protein Aasi_1169 [Candidatus Amoebophilus asiaticus
5a2]
Length = 433
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/187 (44%), Positives = 104/187 (55%), Gaps = 33/187 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRLV +AI+ E G TRDR YG + W F +VDTGG + S
Sbjct: 5 VAIVGRPNVGKSTLFNRLVEERKAIMASESGTTRDRHYGYATWNGKNFTVVDTGGYVQGS 64
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+I E I QA AIEE+ V++F+VD Q G
Sbjct: 65 S---DIFE--------------------------KSICEQAKIAIEEASVVLFMVDCQVG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGTGT 344
+TA D+E+A LR DK ++L NK ++ +M EF +LG +P PISA SGTGT
Sbjct: 96 ITAMDKEVAHILRA--ADKPVLLVANKADNVDTALM-AHEFHALGLGNPYPISAASGTGT 152
Query: 345 GELLDLV 351
G+LLD V
Sbjct: 153 GDLLDQV 159
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 77/162 (47%), Gaps = 41/162 (25%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRD------RMYGRSFWGEHEFMLV 216
+P++AI+GRPNVGKS+L N L+G R+IV G TRD +YG++ F+L
Sbjct: 173 IPKIAILGRPNVGKSSLLNALLGEERSIVTPIAGTTRDAIDTTYNLYGKN------FILT 226
Query: 217 DTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVI 276
DT G+ SK + ED+ +T+ +A A++++ V
Sbjct: 227 DTAGIRKKSK----VKEDIEFYSTL-----------------------RALKALQDADVC 259
Query: 277 IFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
I ++D GL D + K K I+L VNK + +K
Sbjct: 260 IIMIDATLGLEGQDVNLISLAYK--YKKGILLLVNKWDLIKK 299
>gi|222616294|gb|EEE52426.1| hypothetical protein OsJ_34551 [Oryza sativa Japonica Group]
Length = 563
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/75 (81%), Positives = 65/75 (86%)
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLPISAISGTGT 344
GL AAD EIADWLR+NY DK IILAVNKCESPRKG MQ +FWSLGFSPLPISAI+GTGT
Sbjct: 184 GLVAADIEIADWLRRNYSDKHIILAVNKCESPRKGQMQALDFWSLGFSPLPISAITGTGT 243
Query: 345 GELLDLVCSELKKVE 359
GELLD+VCSEL E
Sbjct: 244 GELLDMVCSELSNFE 258
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 57/78 (73%), Gaps = 3/78 (3%)
Query: 108 IDVDALEREAKDAVREYSSLLSRQLIIQDETDDRKDSGKKQKKRKTTIGNVPEHLLPRVA 167
+DV+A+E EA AV + S LSR+L I D+ D++ + + + + ++P++LLPRVA
Sbjct: 108 MDVEAMEEEALGAVADLSERLSRELRIDDDVRDKR---RIIRDKTSASKHIPDNLLPRVA 164
Query: 168 IVGRPNVGKSALFNRLVG 185
I+GRPNVGKSALFNRLVG
Sbjct: 165 IIGRPNVGKSALFNRLVG 182
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 76/161 (47%), Gaps = 37/161 (22%)
Query: 161 HLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDT 218
+ +P +AIVGRPNVGKS++ N LVG +R IV G TRD + F E ++ L+DT
Sbjct: 268 NYIPAIAIVGRPNVGKSSILNALVGEDRTIVSPVSGTTRDAI-DTEFTTEDGQKYKLIDT 326
Query: 219 GGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIE----RQATAAIEESC 274
G+ R AAVA S E ++A AI S
Sbjct: 327 AGI----------------------------RRRAAVASAGSTTETLSVKRAFRAIRRSD 358
Query: 275 VIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCES 315
V+ +V+ A +T D +IA+ + K K ++ VNK ++
Sbjct: 359 VVALVVEAMACITEQDYKIAERIEKE--GKACVIVVNKWDT 397
>gi|381210191|ref|ZP_09917262.1| GTP-binding protein Der [Lentibacillus sp. Grbi]
Length = 436
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/195 (42%), Positives = 113/195 (57%), Gaps = 36/195 (18%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS +FNRLVG +IV D PGVTRDR+Y + W F ++DTGG
Sbjct: 6 VAIVGRPNVGKSTIFNRLVGERISIVEDTPGVTRDRVYAEAEWLTTTFNVIDTGG----- 60
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
I M PL + + +QA AI+E+ VIIFL++G+ G
Sbjct: 61 ---------------IEMSDEPLLVQ----------MRQQAEIAIDEADVIIFLLNGREG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIM-QVSEFWSLGFS-PLPISAISGTG 343
+TAADEE+A L K+ +K + LAVNK ++P G+ ++ E+++LGF P PIS G G
Sbjct: 96 ITAADEEVAKILYKS--NKPVALAVNKIDNP--GMRDEIYEYYALGFGEPYPISGAHGLG 151
Query: 344 TGELLDLVCSELKKV 358
G+LLD V ++
Sbjct: 152 LGDLLDAVVGYFPEI 166
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 90/191 (47%), Gaps = 35/191 (18%)
Query: 167 AIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSK 226
+++GRPNVGKS+L N ++ R IV ++ G TRD + + +F+++DT G+ +
Sbjct: 179 SVIGRPNVGKSSLVNAMLNEERVIVSEQEGTTRDAVDTYLHKDDQDFVIIDTAGM----R 234
Query: 227 SQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGL 286
+ + E AT + +V R A AIE S V++ L+D + G+
Sbjct: 235 KRGKVYE---------------ATEKYSVLR--------ALKAIERSDVVLVLIDAETGI 271
Query: 287 TAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSEFWSLGFSPL---PISAIS 340
D++IA + + + II+ VNK E+ K + + + GF L PI +S
Sbjct: 272 REQDKKIAGYAHE--AGRSIIIVVNKWDTVETDEKTMKEFEQKVRAGFQYLDYAPIVFLS 329
Query: 341 GTGTGELLDLV 351
L L+
Sbjct: 330 AKTRKRLHTLI 340
>gi|429765820|ref|ZP_19298100.1| ribosome biogenesis GTPase Der [Clostridium celatum DSM 1785]
gi|429185673|gb|EKY26647.1| ribosome biogenesis GTPase Der [Clostridium celatum DSM 1785]
Length = 439
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 109/193 (56%), Gaps = 33/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L G +IV D PGVTRDR+Y + W H F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAGKRISIVQDTPGVTRDRVYAEAEWLSHTFTMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P ++ V +M RQA AIE + VI+F+VDG+
Sbjct: 62 ----EPE-------------------NQDIIVKQM----RRQANIAIETADVIMFVVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLTAAD E+A LRK+ K ++L VNK ++ K EF+ LG P+ ISA G
Sbjct: 95 EGLTAADNEVATMLRKS--KKPVVLVVNKIDNL-KDEENAWEFYKLGIGDPVAISAGLGK 151
Query: 343 GTGELLDLVCSEL 355
G G++LD+V +
Sbjct: 152 GLGDMLDMVVAHF 164
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 77/150 (51%), Gaps = 29/150 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++A++G+PNVGKS+L NRL+G +R IV D G TRD + + +F L+DT G+
Sbjct: 178 KIAMIGKPNVGKSSLINRLLGEDRLIVSDIAGTTRDAIDSKVETEFGKFTLIDTAGLRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK + I E ++ T+ AA+E + V I ++D
Sbjct: 238 SKVKEEI-ERYSVIRTL--------------------------AAVERADVCILMIDATE 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCE 314
G+T DE+I + + ++K I++ VNK +
Sbjct: 271 GVTEQDEKIIGFAHE--LNKAIMVIVNKWD 298
>gi|403386906|ref|ZP_10928963.1| GTP-binding protein Der [Clostridium sp. JC122]
Length = 439
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 108/193 (55%), Gaps = 33/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L G AIV D PGVTRDR+Y + W H F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAGKRIAIVQDTPGVTRDRIYAEAEWLNHNFTIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P ED+ + S + RQA AIE + VI+F+VDG+
Sbjct: 62 ----EPT-NEDIIM----------------------SQMRRQANIAIETADVIVFIVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGT 342
AGL +D E+A LRK+ K I+L VNK + + EF++LG +P+ ISA G
Sbjct: 95 AGLHPSDHEVAQMLRKS--KKPIVLVVNKVDRIEQE-DNAYEFYNLGIGNPVTISASQGL 151
Query: 343 GTGELLDLVCSEL 355
G G++LD V
Sbjct: 152 GLGDMLDEVVKHF 164
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 40/212 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++A++G+PNVGKS+L N+++G +R IV + PG TRD + + E +F L+DT G+
Sbjct: 178 KIAMIGKPNVGKSSLINKIIGEDRNIVSNIPGTTRDAIDSKVETNEGKFTLIDTAGLRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK + I E ++ T+ AIE + V I ++D
Sbjct: 238 SKVKEEI-ERYSVVRTL--------------------------TAIERADVCILMIDATE 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS--------LGFSP-LP 335
GL+ DE+I + + ++K I++ VNK + K + EF + + ++P L
Sbjct: 271 GLSDQDEKIVGYAHE--LNKAIMVIVNKWDLIEKDDKTMKEFQNNIAKGLSFMNYAPYLF 328
Query: 336 ISAISGTGTGELLDLV--CSELKKVEVCIGFL 365
ISA +G ++L + C + V G L
Sbjct: 329 ISAKTGQRVNKVLQMAKECYDSYSKRVATGVL 360
>gi|334134171|ref|ZP_08507684.1| ribosome biogenesis GTPase Der [Paenibacillus sp. HGF7]
gi|333608299|gb|EGL19600.1| ribosome biogenesis GTPase Der [Paenibacillus sp. HGF7]
Length = 440
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 115/193 (59%), Gaps = 33/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNR++G AIV D+PGVTRDR+YG W + EF ++DTGG+
Sbjct: 4 PILAIVGRPNVGKSTIFNRIIGDRLAIVEDKPGVTRDRLYGIGEWLDREFSVIDTGGIEV 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ Q IM+ + + QA AIEE+ VIIF+VD +
Sbjct: 64 EGEDQ--IMKSVRV---------------------------QAELAIEEADVIIFMVDAK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
AG+T+AD+E+A L ++ K ++LAVNK ++ ++ ++ EF+SLGF P+ IS G
Sbjct: 95 AGVTSADQEVAQLLFRSR--KPVVLAVNKVDNIQRQ-DEIYEFYSLGFGDPIGISGAHGI 151
Query: 343 GTGELLDLVCSEL 355
G G++L+ +
Sbjct: 152 GIGDMLEAAAAHF 164
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 94/196 (47%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VA++GRPNVGKS+L N ++G +R IV D+ G TRD + + +++++DT G+
Sbjct: 178 KVALIGRPNVGKSSLVNAILGEDRVIVSDQAGTTRDAIDTPFELDDQKYVIIDTAGMRKR 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K N T + +V R A AIE + V++ +++G+
Sbjct: 238 GKVYEN-------------------TEKYSVMR--------AMKAIERADVVLVVINGEE 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSE-----FWSLGFSP-LP 335
G+ D+ IA + + K I VNK E K + Q ++ F + ++P L
Sbjct: 271 GIIEQDKHIAGYAHE--AGKAAIFVVNKWDVVEKDDKTMHQFTQKIRDHFLFMTYAPVLY 328
Query: 336 ISAISGTGTGELLDLV 351
+SA + +LL +V
Sbjct: 329 VSARTTQRVQKLLPMV 344
>gi|404370873|ref|ZP_10976189.1| GTPase Der [Clostridium sp. 7_2_43FAA]
gi|226913004|gb|EEH98205.1| GTPase Der [Clostridium sp. 7_2_43FAA]
Length = 438
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/195 (41%), Positives = 110/195 (56%), Gaps = 33/195 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L G +IV D PGVTRDR+Y ++ W + F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAGQRISIVQDTPGVTRDRVYAQAEWLNYNFTMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P ED+ + + RQA AIE + VIIF+VDG+
Sbjct: 62 ----EPE-REDIIV----------------------KQMRRQANIAIETADVIIFVVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT AD E+A+ LRK+ K ++L VNK +S ++ EF++LG P+ ISA
Sbjct: 95 EGLTPADHEVANMLRKS--KKEVVLVVNKVDSLKEE-ENAWEFYNLGIGDPVTISASQAL 151
Query: 343 GTGELLDLVCSELKK 357
G G++LD V K
Sbjct: 152 GLGDMLDRVVENFDK 166
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 91/194 (46%), Gaps = 38/194 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R+A++G+PNVGKS+L NRL+G R IV D PG TRD + + +F+LVDT G+
Sbjct: 178 RIAMIGKPNVGKSSLINRLLGEERLIVSDIPGTTRDSIDSALETEQGKFILVDTAGLRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK + I I T AAIE + V I ++D
Sbjct: 238 SKVKEEIERYSVIRT---------------------------YAAIERADVCILMIDATE 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSEFWSLGFSPLP------ 335
G+T DE+I + + M+K I++ VNK E K + + E + L
Sbjct: 271 GVTEQDEKIIGYAHE--MNKAIMVIVNKWDLIEKDDKTMQRYKEELQMNLKFLKYAKYLF 328
Query: 336 ISAISGTGTGELLD 349
ISA +G T ++L+
Sbjct: 329 ISAKTGQRTHKVLE 342
>gi|402834205|ref|ZP_10882809.1| ribosome-associated GTPase EngA [Selenomonas sp. CM52]
gi|402278784|gb|EJU27839.1| ribosome-associated GTPase EngA [Selenomonas sp. CM52]
Length = 442
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 110/191 (57%), Gaps = 33/191 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L +IV D PGVTRDR+Y + W EF ++DTGG
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLGRKRVSIVDDLPGVTRDRIYLDAEWLGKEFTMIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I L T +A + M +QA A+EE+ VI+FLVDG+
Sbjct: 61 ----------------------IELDTSDAILRSM----RQQAQIAMEEADVILFLVDGR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
AGLT ADEE+ LR K ++LAVNK +SP++ V EF++LG P+PISA +
Sbjct: 95 AGLTLADEEVGKMLRTT--KKPVLLAVNKIDSPKQE-ADVYEFYNLGLGDPVPISATNAM 151
Query: 343 GTGELLDLVCS 353
G+LLD + +
Sbjct: 152 NLGDLLDALVA 162
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 93/196 (47%), Gaps = 39/196 (19%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+A++GRPNVGKS+L N L+G R IV D G TRD + + +F+L+DT G+
Sbjct: 179 IAVIGRPNVGKSSLVNALLGEERVIVSDVAGTTRDAIDTHFMAEDTKFILIDTAGMRRKG 238
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
K +A + R M +A A++ + V++ ++D AG
Sbjct: 239 KI------------------------DAPIERYSVM---RALRAVDRADVVLVVLDATAG 271
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCE----SPRKGIMQVS-----EFWSLGFSP-LP 335
+T D++IA + ++ K ++L VNK + K ++ + E L ++P L
Sbjct: 272 ITEQDKKIAGYAHES--GKAVVLIVNKWDIYENKDEKSTLRFTDELRIELGFLQYAPVLY 329
Query: 336 ISAISGTGTGELLDLV 351
SA++ + DLV
Sbjct: 330 TSALTHQRVARVTDLV 345
>gi|260771392|ref|ZP_05880317.1| GTP-binding protein EngA [Vibrio furnissii CIP 102972]
gi|375131798|ref|YP_004993898.1| GTP-binding protein [Vibrio furnissii NCTC 11218]
gi|260613518|gb|EEX38712.1| GTP-binding protein EngA [Vibrio furnissii CIP 102972]
gi|315180972|gb|ADT87886.1| GTP-binding protein [Vibrio furnissii NCTC 11218]
Length = 495
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 114/198 (57%), Gaps = 40/198 (20%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YG++ GEHEF+++DTGG+
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
EG+ T+ AA Q+ AAI+E+ V++F+VD
Sbjct: 61 DGSE------------------EGVE--TKMAA----------QSLAAIDEADVVLFMVD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSPL-PIS 337
G+AGLT ADE IA+ LR+ ++K IL VNK + GI +EFW LG + I+
Sbjct: 91 GRAGLTVADEAIANHLRR--VEKNAILVVNKVD----GIDAETASAEFWQLGVDQMFQIA 144
Query: 338 AISGTGTGELLDLVCSEL 355
A G G G L+D + L
Sbjct: 145 AAHGRGVGALIDRALNPL 162
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 100/220 (45%), Gaps = 40/220 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS L NR++G R +V D PG TRD +Y E E++L+DT GV
Sbjct: 208 KLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMQRDEREYVLIDTAGVRRR 267
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + E ++ T+ AIE++ V++ +VD +
Sbjct: 268 KRINETV-EKFSVVKTL--------------------------KAIEDANVVLLVVDARE 300
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSEFWSLGFSPLP----IS 337
++ D + + + I++AVNK ++ K ++ LGF IS
Sbjct: 301 NISDQDLSLLGFALN--AGRSIVIAVNKWDGLDTDVKERVKKELDRRLGFVDFARIHFIS 358
Query: 338 AISGTGTGELLDLVCSELKKVEVCIGFLLICNAITKIFHI 377
A+ GTG G L + V + +G + +T+I +
Sbjct: 359 ALHGTGVGHLFESVQEAYRSATTRVG----TSVLTRIMKM 394
>gi|415729443|ref|ZP_11472469.1| bifunctional cytidylate kinase/GTP-binding protein [Gardnerella
vaginalis 6119V5]
gi|388064477|gb|EIK87011.1| bifunctional cytidylate kinase/GTP-binding protein [Gardnerella
vaginalis 6119V5]
Length = 730
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/201 (41%), Positives = 103/201 (51%), Gaps = 34/201 (16%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
++++GRPNVGKS L NR++G A+V D PGVTRDR+ + W F LVDTGG
Sbjct: 296 ISVIGRPNVGKSTLVNRILGHRVAVVEDTPGVTRDRVSYDAEWAGTNFKLVDTGGW---- 351
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
EA V + S I +QA A+ S +IFLVDGQ G
Sbjct: 352 --------------------------EADVEGIDSSIAQQAQVAVRLSDAVIFLVDGQVG 385
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
LTA DE I LR K I LAVNK + R + +EFW LG P ISA+ G G
Sbjct: 386 LTATDERIVSMLRA--AGKPITLAVNKVDDARSEYL-TAEFWKLGMGEPYGISAMHGRGV 442
Query: 345 GELLDLVCSELKKVEVCIGFL 365
G+LLD + LKK GFL
Sbjct: 443 GDLLDAALNSLKKANKTSGFL 463
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 43/79 (54%), Gaps = 12/79 (15%)
Query: 149 KKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRD------RM 202
KK T G + L RVA+VGRPNVGKS+L N L RA+V D G TRD R+
Sbjct: 454 KKANKTSGFLTPQGLRRVALVGRPNVGKSSLLNHLAHEERAVVNDLAGTTRDPVDEVVRV 513
Query: 203 YGRSFWGEHEFMLVDTGGV 221
G +++ +DT G+
Sbjct: 514 DG------EDWLFIDTAGI 526
>gi|153939462|ref|YP_001391817.1| GTP-binding protein EngA [Clostridium botulinum F str. Langeland]
gi|384462825|ref|YP_005675420.1| ribosome-associated GTPase EngA [Clostridium botulinum F str.
230613]
gi|166224329|sp|A7GGA7.1|DER_CLOBL RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|152935358|gb|ABS40856.1| ribosome-associated GTPase EngA [Clostridium botulinum F str.
Langeland]
gi|295319842|gb|ADG00220.1| ribosome-associated GTPase EngA [Clostridium botulinum F str.
230613]
Length = 439
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/194 (42%), Positives = 108/194 (55%), Gaps = 33/194 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L G AIV D PGVTRDR+Y + W ++F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAGKRIAIVQDTPGVTRDRIYAEAEWLNYKFTMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P ED+ + S + RQA AIE + VIIFLVDG+
Sbjct: 62 ----EPK-SEDIIV----------------------SQMRRQAQIAIEMANVIIFLVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL ADEE+A LRK+ K ++L VNK + K EF++LG P+ IS+
Sbjct: 95 EGLAPADEEVAQMLRKS--KKPVVLVVNKIDK-LKDENNAYEFYNLGIGDPVTISSSQAL 151
Query: 343 GTGELLDLVCSELK 356
G G++LD V K
Sbjct: 152 GLGDMLDRVVEYFK 165
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 88/187 (47%), Gaps = 42/187 (22%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRM--YGRSFWGEHEFMLVDTGGVLN 223
+A +G+PNVGKS+L N+L+G R IV D PG TRD + Y + +G EF L+DT G+
Sbjct: 179 IAFIGKPNVGKSSLINKLLGEERLIVSDIPGTTRDSIDSYVDTEFG--EFTLIDTAGLRR 236
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
SK + I I T A+IE + V I ++D
Sbjct: 237 KSKVKEEIERYSVIRT---------------------------YASIERADVCILMIDAT 269
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF-----WSLGFSP----L 334
G++ D++I + ++K I++ VNK + K + +F +L F P L
Sbjct: 270 EGISEQDQKIIGYAHD--INKAILVIVNKWDLVEKDDKTMDKFKKELKVNLSFMPYAKYL 327
Query: 335 PISAISG 341
ISA +G
Sbjct: 328 FISAKTG 334
>gi|168180594|ref|ZP_02615258.1| GTP-binding protein [Clostridium botulinum NCTC 2916]
gi|226949875|ref|YP_002804966.1| GTP-binding protein EngA [Clostridium botulinum A2 str. Kyoto]
gi|387818745|ref|YP_005679092.1| GTP-binding protein EngA [Clostridium botulinum H04402 065]
gi|254783146|sp|C1FSU2.1|DER_CLOBJ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|182668460|gb|EDT80439.1| GTP-binding protein [Clostridium botulinum NCTC 2916]
gi|226841615|gb|ACO84281.1| ribosome-associated GTPase EngA [Clostridium botulinum A2 str.
Kyoto]
gi|322806789|emb|CBZ04358.1| GTP-binding protein EngA [Clostridium botulinum H04402 065]
Length = 439
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/194 (42%), Positives = 108/194 (55%), Gaps = 33/194 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L G AIV D PGVTRDR+Y + W ++F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAGKRIAIVQDTPGVTRDRIYAEAEWLNYKFTMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P ED+ + S + RQA AIE + VIIFLVDG+
Sbjct: 62 ----EPK-SEDIIV----------------------SQMRRQAQIAIEMANVIIFLVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL ADEE+A LRK+ K ++L VNK + K EF++LG P+ IS+
Sbjct: 95 EGLAPADEEVAQMLRKS--KKPVVLVVNKIDK-LKDENNAYEFYNLGIGDPVTISSSQAL 151
Query: 343 GTGELLDLVCSELK 356
G G++LD V K
Sbjct: 152 GLGDMLDRVVEYFK 165
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 91/194 (46%), Gaps = 42/194 (21%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRM--YGRSFWGEHEFMLVDTGGVLN 223
+A +G+PNVGKS+L N+L+G R IV D PG TRD + Y + +G EF L+DT G+
Sbjct: 179 IAFIGKPNVGKSSLINKLLGEERLIVSDIPGTTRDSIDSYVDTEFG--EFTLIDTAGLRR 236
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
SK + I I T A+IE + V I ++D
Sbjct: 237 KSKVKEEIERYSVIRT---------------------------YASIERADVCILMIDAT 269
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF-----WSLGFSP----L 334
G++ D++I + ++K I++ VNK + K + +F +L F P L
Sbjct: 270 EGISEQDQKIIGYAHD--INKAILVIVNKWDLVEKDDKTMDKFKKELKVNLSFMPYAKYL 327
Query: 335 PISAISGTGTGELL 348
ISA +G ++L
Sbjct: 328 FISAKTGQRVVKVL 341
>gi|422875795|ref|ZP_16922265.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK1056]
gi|332362231|gb|EGJ40031.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK1056]
Length = 436
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 111/200 (55%), Gaps = 34/200 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATASWLNRKFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K IILAVNK ++P ++ +F++LG P P+S++ G
Sbjct: 93 KEGITDADEYVARMLYKTH--KPIILAVNKVDNPEMR-NEIFDFYALGLGDPFPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEVC 361
GTG++LD + L EV
Sbjct: 150 IGTGDVLDAIVENLPNEEVA 169
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 90/197 (45%), Gaps = 39/197 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTVFTDSEGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPLP 335
G+ D+ IA + + K I++ VNK ++ K + +F L ++P+
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGIVIVVNKWDTLDKDNHTMKDWEEDIRDQFQYLSYAPII 326
Query: 336 -ISAISGTGTGELLDLV 351
+SA++ +L D++
Sbjct: 327 FVSALTKQRLHKLPDMI 343
>gi|406838676|ref|ZP_11098270.1| GTP-binding protein Der [Lactobacillus vini DSM 20605]
Length = 436
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/195 (41%), Positives = 111/195 (56%), Gaps = 34/195 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y S W +F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYTHSEWLGQKFSLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+G E P T+ I+ QA AI+E+ VI+ +V +
Sbjct: 62 ----------------EMGTE--PFLTQ----------IKEQAEIAIDEADVIVLIVSVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE++A L + DK +I+AVNK ++P + +F+SLGF P+PIS + G
Sbjct: 94 EGVTEADEKVAQILYQT--DKPVIVAVNKVDNPELR-ADIYDFYSLGFGDPIPISGVHGI 150
Query: 343 GTGELLDLVCSELKK 357
G G+LL+ VC K
Sbjct: 151 GIGDLLEKVCQSFPK 165
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 79/167 (47%), Gaps = 32/167 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHE--FMLVDTGGVL 222
+ +++GRPNVGKS+L N ++G NR IV G TRD + F E+ F ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLVNAILGQNRVIVSKIEGTTRDAI-DTPFKTENGECFTVIDTAGIR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A AI+ S V++ ++D
Sbjct: 235 KKGKVYEN-------------------TEKYSVLR--------ALRAIDRSDVVLVVLDA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSL 329
+ G+ D+++A + + + II+ VNK + +K + EF L
Sbjct: 268 ETGIREQDKKVAGYAHE--AGRGIIILVNKWDLIKKDNYTLVEFEKL 312
>gi|170757031|ref|YP_001782064.1| GTP-binding protein EngA [Clostridium botulinum B1 str. Okra]
gi|429245957|ref|ZP_19209322.1| GTP-binding protein Der [Clostridium botulinum CFSAN001628]
gi|229710728|sp|B1IIN2.1|DER_CLOBK RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|169122243|gb|ACA46079.1| ribosome-associated GTPase EngA [Clostridium botulinum B1 str.
Okra]
gi|428757015|gb|EKX79522.1| GTP-binding protein Der [Clostridium botulinum CFSAN001628]
Length = 439
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/194 (42%), Positives = 108/194 (55%), Gaps = 33/194 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L G AIV D PGVTRDR+Y + W ++F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAGKRIAIVQDTPGVTRDRIYAEAEWLNYKFTMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P ED+ + S + RQA AIE + VIIFLVDG+
Sbjct: 62 ----EPE-SEDIIV----------------------SQMRRQAQIAIEMANVIIFLVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL ADEE+A LRK+ K ++L VNK + K EF++LG P+ IS+
Sbjct: 95 EGLAPADEEVAQMLRKS--KKPVVLVVNKIDK-LKDENNAYEFYNLGIGDPVTISSSQAL 151
Query: 343 GTGELLDLVCSELK 356
G G++LD V K
Sbjct: 152 GLGDMLDRVVEYFK 165
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 91/194 (46%), Gaps = 42/194 (21%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRM--YGRSFWGEHEFMLVDTGGVLN 223
+A +G+PNVGKS+L N+L+G R IV D PG TRD + Y + +G EF L+DT G+
Sbjct: 179 IAFIGKPNVGKSSLINKLLGEERLIVSDIPGTTRDSIDSYVDTEFG--EFTLIDTAGLRR 236
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
SK + I I T A+IE + V I ++D
Sbjct: 237 KSKVKEEIERYSVIRT---------------------------YASIERADVCILMIDAT 269
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF-----WSLGFSP----L 334
G++ D++I + ++K I++ VNK + K + +F +L F P L
Sbjct: 270 EGISEQDQKIIGYAHD--INKAILVIVNKWDLVEKDDKTMDKFKKELKVNLSFMPYAKYL 327
Query: 335 PISAISGTGTGELL 348
ISA +G ++L
Sbjct: 328 FISAKTGQRVVKVL 341
>gi|170760623|ref|YP_001787836.1| GTP-binding protein EngA [Clostridium botulinum A3 str. Loch Maree]
gi|238688523|sp|B1KX71.1|DER_CLOBM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|169407612|gb|ACA56023.1| ribosome-associated GTPase EngA [Clostridium botulinum A3 str. Loch
Maree]
Length = 439
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/194 (42%), Positives = 108/194 (55%), Gaps = 33/194 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L G AIV D PGVTRDR+Y + W ++F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAGKRIAIVQDTPGVTRDRIYAEAEWLNYKFTMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P ED+ + S + RQA AIE + VIIFLVDG+
Sbjct: 62 ----EPE-SEDIIV----------------------SQMRRQAQIAIEMANVIIFLVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL ADEE+A LRK+ K ++L VNK + K EF++LG P+ IS+
Sbjct: 95 EGLAPADEEVAQMLRKS--KKPVVLVVNKIDK-LKDENNAYEFYNLGIGDPVTISSSQAL 151
Query: 343 GTGELLDLVCSELK 356
G G++LD V K
Sbjct: 152 GLGDMLDRVVEYFK 165
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 91/194 (46%), Gaps = 42/194 (21%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRM--YGRSFWGEHEFMLVDTGGVLN 223
+A +G+PNVGKS+L N+L+G R IV D PG TRD + Y + +G EF L+DT G+
Sbjct: 179 IAFIGKPNVGKSSLINKLLGEERLIVSDIPGTTRDSIDSYVDTEFG--EFTLIDTAGLRR 236
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
SK + I I T A+IE + V I ++D
Sbjct: 237 KSKVKEEIERYSVIRT---------------------------YASIERADVCILMIDAI 269
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF-----WSLGFSP----L 334
G++ D++I + ++K I++ VNK + K + +F +L F P L
Sbjct: 270 EGISEQDQKIIGYAHD--INKAILVIVNKWDLVEKDDKTMDKFKKELKVNLSFMPYAKYL 327
Query: 335 PISAISGTGTGELL 348
ISA +G ++L
Sbjct: 328 FISAKTGQRVVKVL 341
>gi|401681184|ref|ZP_10813089.1| ribosome-associated GTPase EngA [Streptococcus sp. AS14]
gi|400187319|gb|EJO21514.1| ribosome-associated GTPase EngA [Streptococcus sp. AS14]
Length = 436
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 111/200 (55%), Gaps = 34/200 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATANWLNRKFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K IILAVNK ++P ++ +F++LG P P+S++ G
Sbjct: 93 KEGITDADEYVARMLYKTH--KPIILAVNKVDNPEMR-NEIFDFYALGLGDPFPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEVC 361
GTG++LD + L EV
Sbjct: 150 IGTGDVLDAIVENLPNEEVA 169
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 90/197 (45%), Gaps = 39/197 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTVFTDSEGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPLP 335
G+ D+ IA + + K I++ VNK ++ K + +F L ++P+
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGIVIVVNKWDTLEKDNHTMKDWEEDIRDQFQYLSYAPII 326
Query: 336 -ISAISGTGTGELLDLV 351
+SA++ +L D++
Sbjct: 327 FVSALTKQRLHKLPDMI 343
>gi|422884715|ref|ZP_16931163.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK49]
gi|332359145|gb|EGJ36966.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK49]
Length = 436
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 111/200 (55%), Gaps = 34/200 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATANWLNRKFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K IILAVNK ++P ++ +F++LG P P+S++ G
Sbjct: 93 KEGITDADEYVARMLYKTH--KPIILAVNKVDNPEMR-NEIFDFYALGLGDPFPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEVC 361
GTG++LD + L EV
Sbjct: 150 IGTGDVLDAIVENLPNEEVA 169
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 90/197 (45%), Gaps = 39/197 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTVFTDSEGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPLP 335
G+ D+ IA + + K II+ VNK ++ K + +F L ++P+
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGIIIVVNKWDTLEKDNHTMKDWEEDIRDQFQYLSYAPII 326
Query: 336 -ISAISGTGTGELLDLV 351
+SA++ +L D++
Sbjct: 327 FVSALTKQRLHKLPDMI 343
>gi|323350996|ref|ZP_08086653.1| ribosome-associated GTPase EngA [Streptococcus sanguinis VMC66]
gi|322122720|gb|EFX94429.1| ribosome-associated GTPase EngA [Streptococcus sanguinis VMC66]
Length = 436
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 111/200 (55%), Gaps = 34/200 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATANWLNRKFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K IILAVNK ++P ++ +F++LG P P+S++ G
Sbjct: 93 KEGITDADEYVARMLYKTH--KPIILAVNKVDNPEMR-NEIFDFYALGLGDPFPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEVC 361
GTG++LD + L EV
Sbjct: 150 IGTGDVLDAIVENLPNEEVA 169
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 89/197 (45%), Gaps = 39/197 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G R I G TRD + E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEERVIASPVAGTTRDAIDTVFTDSEGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPLP 335
G+ D+ IA + + K I++ VNK ++ K + +F L ++P+
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGIVIVVNKWDTLEKDNHTMKDWEEDIRDQFQYLSYAPII 326
Query: 336 -ISAISGTGTGELLDLV 351
+SA++ +L D++
Sbjct: 327 FVSALTKQRLHKLPDMI 343
>gi|374324515|ref|YP_005077644.1| GTP-binding protein Der [Paenibacillus terrae HPL-003]
gi|357203524|gb|AET61421.1| GTP-binding protein Der [Paenibacillus terrae HPL-003]
Length = 440
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/197 (40%), Positives = 114/197 (57%), Gaps = 33/197 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR++G +IV D+PG+TRDR+YG S W F ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIIGDRLSIVEDKPGITRDRIYGISEWNGKSFSIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I + I +I M QA AIEE+ VI+F+ D +
Sbjct: 62 ------EIDGEDEILKSIRM---------------------QAELAIEEADVIVFMSDAK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
AG+T +DEE+A L ++ K +I+AVNK ++ + + + EF+S GF P+ IS G
Sbjct: 95 AGITQSDEEVAQMLYRS--GKPVIVAVNKVDNLERADL-IYEFYSYGFGDPIAISGSHGI 151
Query: 343 GTGELLDLVCSELKKVE 359
G G+LLD + S L ++E
Sbjct: 152 GLGDLLDAITSNLPELE 168
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 66/132 (50%), Gaps = 27/132 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
RVA++GRPNVGKS+L N ++G R IV D G TRD + +++L+DT G+
Sbjct: 178 RVALIGRPNVGKSSLVNAILGEERVIVSDIAGTTRDAIDTPFEKDGQKYVLIDTAGM--- 234
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E T + +V R A AIE + V++ +++G+
Sbjct: 235 -RKRGKVYE---------------TTEKYSVMR--------AMRAIERADVVLVVINGEE 270
Query: 285 GLTAADEEIADW 296
G+ D+ IA +
Sbjct: 271 GIIEQDKHIAGY 282
>gi|422851042|ref|ZP_16897712.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK150]
gi|325695118|gb|EGD37020.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK150]
Length = 436
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 111/200 (55%), Gaps = 34/200 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATANWLNRKFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K IILAVNK ++P ++ +F++LG P P+S++ G
Sbjct: 93 KEGITDADEYVARMLYKTH--KPIILAVNKVDNPEMR-NEIFDFYALGLGDPFPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEVC 361
GTG++LD + L EV
Sbjct: 150 IGTGDVLDAIVENLPNEEVA 169
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 89/197 (45%), Gaps = 39/197 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G R I G TRD + E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEERVIASPVAGTTRDAIDTVFTDSEGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPLP 335
G+ D+ IA + + K I++ VNK ++ K + +F L ++P+
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGIVIVVNKWDTLEKDNHTMKDWEEDIRDQFQYLSYAPII 326
Query: 336 -ISAISGTGTGELLDLV 351
+SA++ +L D++
Sbjct: 327 FVSALTKQRLHKLPDMI 343
>gi|322386141|ref|ZP_08059775.1| ribosome-associated GTPase EngA [Streptococcus cristatus ATCC
51100]
gi|417922333|ref|ZP_12565821.1| ribosome-associated GTPase EngA [Streptococcus cristatus ATCC
51100]
gi|321269833|gb|EFX52759.1| ribosome-associated GTPase EngA [Streptococcus cristatus ATCC
51100]
gi|342832430|gb|EGU66725.1| ribosome-associated GTPase EngA [Streptococcus cristatus ATCC
51100]
Length = 436
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 111/200 (55%), Gaps = 34/200 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATADWLNRKFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K IILAVNK ++P ++ +F++LG P P+S++ G
Sbjct: 93 KEGITDADEYVARMLYKTH--KPIILAVNKVDNPEMR-NEIYDFYALGLGDPFPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEVC 361
GTG++LD + L EV
Sbjct: 150 IGTGDVLDAIVENLPHEEVV 169
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 90/197 (45%), Gaps = 39/197 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTVFTDSEGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPLP 335
G+ D+ IA + + K I++ VNK ++ K + +F L ++P+
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGIVIVVNKWDTLEKDNHTMKDWEEDIRDQFQYLSYAPII 326
Query: 336 -ISAISGTGTGELLDLV 351
+SA++ +L D++
Sbjct: 327 FVSALTKQRLHKLPDMI 343
>gi|269792400|ref|YP_003317304.1| small GTP-binding protein [Thermanaerovibrio acidaminovorans DSM
6589]
gi|269100035|gb|ACZ19022.1| small GTP-binding protein [Thermanaerovibrio acidaminovorans DSM
6589]
Length = 443
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/191 (43%), Positives = 113/191 (59%), Gaps = 33/191 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS+LFNRL+G AIV D PGVTRDR+Y + W F LVDTGG+ + S
Sbjct: 4 VAIVGRPNVGKSSLFNRLIGRKLAIVEDIPGVTRDRLYAETEWDGKRFYLVDTGGIESAS 63
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
P+ +D+ I RQ A++E V+IFL+DG+ G
Sbjct: 64 ---PHPFQDV--------------------------IARQVQMALKECDVVIFLLDGKEG 94
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGTGT 344
+TA DE IA+ LR++ K +I+A+NK ++P++ V + +SLGF + + IS G G
Sbjct: 95 VTAGDEAIAEMLRRS--SKPVIVAMNKIDNPKRE-DNVLDAYSLGFHTVMGISVEHGIGI 151
Query: 345 GELLDLVCSEL 355
G+LLD V S L
Sbjct: 152 GDLLDSVVSAL 162
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 93/197 (47%), Gaps = 38/197 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++++VGRPNVGKS+LFNRL+G RA+V PG TRD + G+ + L+DT G+
Sbjct: 177 KLSVVGRPNVGKSSLFNRLIGQERAVVSPIPGTTRDTVDVDVRLGDVDVRLMDTAGMRRK 236
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
S+ + +E ++ T+ AI+ S V + L+D
Sbjct: 237 SRVD-DPLEYYSVVRTL--------------------------KAIDRSDVSLVLMDATE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCE--SPRKGIMQV------SEFWSLGFSPLP- 335
LT D+ + L K +I+ VNK + PR+ + V + +L ++PL
Sbjct: 270 LLTEQDKRL--MLHVEERGKGLIIGVNKWDLLPPREDLGDVIRDQIRDQMPTLSYAPLIF 327
Query: 336 ISAISGTGTGELLDLVC 352
+SA +G G L LV
Sbjct: 328 LSAKTGRGVHRLPPLVS 344
>gi|419780756|ref|ZP_14306597.1| ribosome-associated GTPase EngA [Streptococcus oralis SK100]
gi|383184929|gb|EIC77434.1| ribosome-associated GTPase EngA [Streptococcus oralis SK100]
Length = 436
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/196 (41%), Positives = 108/196 (55%), Gaps = 38/196 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAI 339
+ G+T ADE +A L K Y K +ILAVNK ++P R I +F++LG PLPIS++
Sbjct: 93 KEGITDADEYVARKLYKTY--KPVILAVNKVDNPEMRNDIF---DFYALGLGEPLPISSV 147
Query: 340 SGTGTGELLDLVCSEL 355
G GTG++LD + L
Sbjct: 148 HGIGTGDVLDAIVENL 163
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 30/155 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + + EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTHFTDADGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+ D+ IA + + K +I+ VNK ++ K
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGMIIVVNKWDTLEK 301
>gi|422870290|ref|ZP_16916783.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK1087]
gi|328946827|gb|EGG40964.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK1087]
Length = 436
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 111/200 (55%), Gaps = 34/200 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATANWLNRKFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K IILAVNK ++P ++ +F++LG P P+S++ G
Sbjct: 93 KEGITDADEYVARMLYKTH--KPIILAVNKVDNPEMR-NEIFDFYALGLGDPFPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEVC 361
GTG++LD + L EV
Sbjct: 150 IGTGDVLDAIVENLPNEEVA 169
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 90/197 (45%), Gaps = 39/197 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTVFTDSEGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPLP 335
G+ D+ IA + + K +I+ VNK ++ K + +F L ++P+
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGMIIVVNKWDTLEKDNHTMKDWEEDIRDQFQYLSYAPII 326
Query: 336 -ISAISGTGTGELLDLV 351
+SA++ +L D++
Sbjct: 327 FVSALTKQRLHKLPDMI 343
>gi|422878177|ref|ZP_16924643.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK1059]
gi|422928031|ref|ZP_16960973.1| ribosome-associated GTPase EngA [Streptococcus sanguinis ATCC
29667]
gi|422931027|ref|ZP_16963958.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK340]
gi|332367384|gb|EGJ45117.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK1059]
gi|339617595|gb|EGQ22217.1| ribosome-associated GTPase EngA [Streptococcus sanguinis ATCC
29667]
gi|339620209|gb|EGQ24779.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK340]
Length = 436
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 111/200 (55%), Gaps = 34/200 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATASWLNRKFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K IILAVNK ++P ++ +F++LG P P+S++ G
Sbjct: 93 KEGITDADEYVARMLYKTH--KPIILAVNKVDNPEMR-NEIFDFYALGLGDPFPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEVC 361
GTG++LD + L EV
Sbjct: 150 IGTGDVLDAIVENLPNEEVA 169
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 89/197 (45%), Gaps = 39/197 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G R I G TRD + E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEERVIASPVAGTTRDAIDTVFTDSEGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPLP 335
G+ D+ IA + + K I++ VNK ++ K + +F L ++P+
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGIVIVVNKWDTLEKDNHTMKDWEEDIRDQFQYLSYAPII 326
Query: 336 -ISAISGTGTGELLDLV 351
+SA++ +L D++
Sbjct: 327 FVSALTKQRLHKLPDMI 343
>gi|422857828|ref|ZP_16904478.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK1057]
gi|327462002|gb|EGF08331.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK1057]
Length = 436
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 111/200 (55%), Gaps = 34/200 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATASWLNRKFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K IILAVNK ++P ++ +F++LG P P+S++ G
Sbjct: 93 KEGITDADEYVARMLYKTH--KPIILAVNKVDNPEMR-NEIFDFYALGLGDPFPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEVC 361
GTG++LD + L EV
Sbjct: 150 IGTGDVLDAIVENLPNEEVA 169
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 90/197 (45%), Gaps = 39/197 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTVFTDSEGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPLP 335
G+ D+ IA + + K +I+ VNK ++ K + +F L ++P+
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGMIIVVNKWDTLEKDNHTMKDWEEDIRDQFQYLSYAPII 326
Query: 336 -ISAISGTGTGELLDLV 351
+SA++ +L D++
Sbjct: 327 FVSALTKQRLHKLPDMI 343
>gi|422882863|ref|ZP_16929319.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK355]
gi|332358244|gb|EGJ36072.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK355]
Length = 436
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 111/200 (55%), Gaps = 34/200 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATANWLNRKFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K IILAVNK ++P ++ +F++LG P P+S++ G
Sbjct: 93 KEGITDADEYVARMLYKTH--KPIILAVNKVDNPEMR-NEIFDFYALGLGDPFPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEVC 361
GTG++LD + L EV
Sbjct: 150 IGTGDVLDAIVENLPNEEVV 169
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 90/197 (45%), Gaps = 39/197 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTVFTDSEGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPLP 335
G+ D+ IA + + K I++ VNK ++ K + +F L ++P+
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGIVIVVNKWDTLEKDNHTMKDWEEDIRDQFQYLSYAPII 326
Query: 336 -ISAISGTGTGELLDLV 351
+SA++ +L D++
Sbjct: 327 FVSALTKQRLHKLPDMI 343
>gi|422848049|ref|ZP_16894725.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK115]
gi|325690931|gb|EGD32931.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK115]
Length = 436
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 111/200 (55%), Gaps = 34/200 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATASWLNRKFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K IILAVNK ++P ++ +F++LG P P+S++ G
Sbjct: 93 KEGITDADEYVARMLYKTH--KPIILAVNKVDNPEMR-NEIFDFYALGLGDPFPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEVC 361
GTG++LD + L EV
Sbjct: 150 IGTGDVLDAIVENLPNEEVV 169
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 90/197 (45%), Gaps = 39/197 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTVFTDSEGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPLP 335
G+ D+ IA + + K I++ VNK ++ K + +F L ++P+
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGIVIVVNKWDTLEKDNHTMKDWEEDIRDQFQYLSYAPII 326
Query: 336 -ISAISGTGTGELLDLV 351
+SA++ +L D++
Sbjct: 327 FVSALTKQRLHKLPDMI 343
>gi|365924922|ref|ZP_09447685.1| GTP-binding protein Der [Lactobacillus mali KCTC 3596 = DSM 20444]
gi|420266395|ref|ZP_14768867.1| GTP-binding protein Der [Lactobacillus mali KCTC 3596 = DSM 20444]
gi|394425505|gb|EJE98464.1| GTP-binding protein Der [Lactobacillus mali KCTC 3596 = DSM 20444]
Length = 436
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/199 (42%), Positives = 115/199 (57%), Gaps = 36/199 (18%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y S W +F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTVFNRIAGERISIVEDVPGVTRDRIYAHSEWLGQKFNLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
IG E P T+ I QA AI+E+ VI+F+V +
Sbjct: 62 ----------------DIGDE--PFLTQ----------ITEQAEIAIDEADVIVFVVSVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPR-KGIMQVSEFWSLGFS-PLPISAISG 341
G+T ADE++A L K+ DK +ILAVNK ++P +G + +F+SLGF PL +S+ G
Sbjct: 94 EGITDADEKVARILYKS--DKPVILAVNKVDNPELRG--DIFDFYSLGFGEPLAVSSTHG 149
Query: 342 TGTGELLDLVCSELKKVEV 360
G G+LLD +C + +V
Sbjct: 150 IGVGDLLDKICHSFPENQV 168
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 98/205 (47%), Gaps = 45/205 (21%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEH--EFMLVDTGGVL 222
R +++GRPNVGKS+L N ++G NR IV + G TRD + F EF ++DT G+
Sbjct: 176 RFSLIGRPNVGKSSLVNAILGENRVIVSNIEGTTRDAI-DTPFISSQGDEFTVIDTAGIR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A AI+ S V++ +++
Sbjct: 235 KRGKVYEN-------------------TEKYSVLR--------AMRAIDRSDVVLVVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSPL 334
+ G+ D+++A + + + II+ VNK ++ +K + EF L ++P+
Sbjct: 268 EEGIREQDKKVAGYAHE--AGRGIIILVNKWDTLKKNNRTMIEFEEKIRQEFQYLSYAPI 325
Query: 335 P-ISAISGTGTGELLDLVCSELKKV 358
+SA+ T + LD + + +K++
Sbjct: 326 IFVSAV----TKQRLDKLPALIKQI 346
>gi|422861919|ref|ZP_16908551.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK408]
gi|327474514|gb|EGF19919.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK408]
Length = 436
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 111/200 (55%), Gaps = 34/200 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATASWLNRKFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K IILAVNK ++P ++ +F++LG P P+S++ G
Sbjct: 93 KEGITDADEYVARMLYKTH--KPIILAVNKVDNPEMR-NEIFDFYALGLGDPFPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEVC 361
GTG++LD + L EV
Sbjct: 150 IGTGDVLDAIVENLPNEEVV 169
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 89/197 (45%), Gaps = 39/197 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G R I G TRD + E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEERVIASPVAGTTRDAIDTVFTDSEGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPLP 335
G+ D+ IA + + K I++ VNK ++ K + +F L ++P+
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGIVIVVNKWDTLEKDNHTMKDWEEDIRDQFQYLSYAPII 326
Query: 336 -ISAISGTGTGELLDLV 351
+SA++ +L D++
Sbjct: 327 FVSALTKQRLHKLPDMI 343
>gi|422859518|ref|ZP_16906162.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK330]
gi|327470401|gb|EGF15857.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK330]
Length = 436
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 111/200 (55%), Gaps = 34/200 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATASWLNRKFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K IILAVNK ++P ++ +F++LG P P+S++ G
Sbjct: 93 KEGITDADEYVARMLYKTH--KPIILAVNKVDNPEMR-NEIFDFYALGLGDPFPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEVC 361
GTG++LD + L EV
Sbjct: 150 IGTGDVLDAIVENLPNEEVV 169
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 90/197 (45%), Gaps = 39/197 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTVFTDSEGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPLP 335
G+ D+ IA + + K I++ VNK ++ K + +F L ++P+
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGIVIVVNKWDTLEKDNHTMKDWEEDIRDQFQYLSYAPII 326
Query: 336 -ISAISGTGTGELLDLV 351
+SA++ +L D++
Sbjct: 327 FVSALTKQRLHKLPDMI 343
>gi|422822992|ref|ZP_16871180.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK405]
gi|422826928|ref|ZP_16875107.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK678]
gi|422854934|ref|ZP_16901592.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK1]
gi|324993642|gb|EGC25561.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK405]
gi|324995046|gb|EGC26959.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK678]
gi|327462911|gb|EGF09232.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK1]
Length = 436
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 111/200 (55%), Gaps = 34/200 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATASWLNRKFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K IILAVNK ++P ++ +F++LG P P+S++ G
Sbjct: 93 KEGITDADEYVARMLYKTH--KPIILAVNKVDNPEMR-NEIFDFYALGLGDPFPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEVC 361
GTG++LD + L EV
Sbjct: 150 IGTGDVLDAIVENLPNEEVA 169
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 89/197 (45%), Gaps = 39/197 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G R I G TRD + E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEERVIASPVAGTTRDAIDTVFTDSEGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPLP 335
G+ D+ IA + + K I++ VNK ++ K + +F L ++P+
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGIVIVVNKWDTLEKDNHTMKDWEEDIRDQFQYLSYAPII 326
Query: 336 -ISAISGTGTGELLDLV 351
+SA++ +L D++
Sbjct: 327 FVSALTKQRLHKLPDMI 343
>gi|322392688|ref|ZP_08066148.1| ribosome-associated GTPase EngA [Streptococcus peroris ATCC 700780]
gi|321144680|gb|EFX40081.1| ribosome-associated GTPase EngA [Streptococcus peroris ATCC 700780]
Length = 436
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 108/194 (55%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K +ILAVNK ++P ++ +F++LG PLPIS++ G
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMR-NEIYDFYALGLGEPLPISSVHG 149
Query: 342 TGTGELLDLVCSEL 355
GTG++LD + L
Sbjct: 150 IGTGDVLDAIVENL 163
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 30/155 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + + EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTHFTDADGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+ D+ IA + + K +I+ VNK ++ K
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGMIIVVNKWDTLEK 301
>gi|125718602|ref|YP_001035735.1| GTP-binding protein EngA [Streptococcus sanguinis SK36]
gi|166225867|sp|A3CPT0.1|DER_STRSV RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|125498519|gb|ABN45185.1| GTP-binding protein, putative [Streptococcus sanguinis SK36]
Length = 436
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 111/200 (55%), Gaps = 34/200 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATANWLNRKFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K IILAVNK ++P ++ +F++LG P P+S++ G
Sbjct: 93 KEGITDADEYVARMLYKTH--KPIILAVNKVDNPEMR-NEIFDFYALGLGDPFPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEVC 361
GTG++LD + L EV
Sbjct: 150 IGTGDVLDAIVENLPNEEVV 169
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 89/197 (45%), Gaps = 39/197 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G R I G TRD + E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEERVIASPVAGTTRDAIDTVFTDSEGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPLP 335
G+ D+ IA + + K I++ VNK ++ K + +F L ++P+
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGIVIVVNKWDTLEKDNHTMKDWEEDIRDQFQYLSYAPII 326
Query: 336 -ISAISGTGTGELLDLV 351
+SA++ +L D++
Sbjct: 327 FVSALTKQRLHKLPDMI 343
>gi|354807555|ref|ZP_09041019.1| ribosome-associated GTPase EngA [Lactobacillus curvatus CRL 705]
gi|354513945|gb|EHE85928.1| ribosome-associated GTPase EngA [Lactobacillus curvatus CRL 705]
Length = 436
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 107/193 (55%), Gaps = 34/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y S W HEF L+DTGG+
Sbjct: 4 PVIAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYTTSEWLGHEFSLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E + A I++QA AI+E+ VIIFLV +
Sbjct: 62 ----------------------------EISDAPFMEQIKQQAEIAIDEADVIIFLVSAR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE +A L + DK I+L VNK ++P + + +F+SLGF P+ +S G
Sbjct: 94 EGVTDADERVAQILYR--ADKPILLGVNKADNPEQR-QDIFDFYSLGFGEPIAVSGAHGQ 150
Query: 343 GTGELLDLVCSEL 355
G G+LLD ++
Sbjct: 151 GLGDLLDAAVAKF 163
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 78/164 (47%), Gaps = 32/164 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
+ +++GRPNVGKS+L N ++ +R IV G TRD + F E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLVNAMLKEDRVIVSQIEGTTRDAI-DTKFTAEDNQEFTMIDTAGIR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + AV R A AI+ S V++ +++
Sbjct: 235 KRGKVYEN-------------------TEKYAVMR--------ALRAIDRSDVVLVVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
+ G+ D+++A + + + II+ VNK ++ +K + EF
Sbjct: 268 EEGIREQDKKVAGYAHE--AGRGIIIVVNKWDTLKKDNHTMKEF 309
>gi|422864887|ref|ZP_16911512.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK1058]
gi|327490071|gb|EGF21859.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK1058]
Length = 436
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 111/200 (55%), Gaps = 34/200 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATASWLNRKFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K IILAVNK ++P ++ +F++LG P P+S++ G
Sbjct: 93 KEGITDADEYVARMLYKTH--KPIILAVNKVDNPEMR-NEIFDFYALGLGDPFPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEVC 361
GTG++LD + L EV
Sbjct: 150 IGTGDVLDAIVENLPNEEVV 169
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 30/155 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G R I G TRD + E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEERVIASPVAGTTRDAIDTVFTDSEGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+ D+ IA + + K I++ VNK ++ K
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGIVIVVNKWDTLEK 301
>gi|255525663|ref|ZP_05392596.1| small GTP-binding protein [Clostridium carboxidivorans P7]
gi|296185422|ref|ZP_06853832.1| ribosome-associated GTPase EngA [Clostridium carboxidivorans P7]
gi|255510649|gb|EET86956.1| small GTP-binding protein [Clostridium carboxidivorans P7]
gi|296050256|gb|EFG89680.1| ribosome-associated GTPase EngA [Clostridium carboxidivorans P7]
Length = 438
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/191 (42%), Positives = 110/191 (57%), Gaps = 33/191 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN++ G +IV D PGVTRDR+Y + W ++ F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKMAGKRISIVQDTPGVTRDRIYAEAEWLKYNFTIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P D+ I S + RQAT A+E + VI+F+VDG+
Sbjct: 62 ----EPE-NSDIII----------------------SQMRRQATMAVETANVIVFIVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT AD+E+A LRK+ K ++L VNK +S K EF++LG P+ ISA
Sbjct: 95 QGLTDADKEVAQMLRKS--KKPVVLVVNKIDS-LKDEDNAYEFYNLGIGEPIAISASQAL 151
Query: 343 GTGELLDLVCS 353
G G++LD V S
Sbjct: 152 GLGDMLDKVVS 162
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 92/196 (46%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++A VG+PNVGKS+L N+L+G +R IV + PG TRD + + +F L+DT G+
Sbjct: 178 KIAFVGKPNVGKSSLINKLLGEDRVIVSEIPGTTRDAIDSYLETEQGKFTLIDTAGLRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK + I I T AIE + V I ++D
Sbjct: 238 SKVKEEIERYSVIRT---------------------------YTAIERADVCILMLDATH 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS--------LGFSP-LP 335
G+T DE+I + + M K I++ VNK + K ++ F + ++P L
Sbjct: 271 GITDQDEKIIGYAHE--MSKAIMVIVNKWDLVEKDTNTMNAFKKQIGMNLSFMSYAPYLF 328
Query: 336 ISAISGTGTGELLDLV 351
ISA +G ++LD+V
Sbjct: 329 ISAKTGQRVQKVLDMV 344
>gi|294786930|ref|ZP_06752184.1| ribosome-associated GTPase EngA [Parascardovia denticolens F0305]
gi|315226567|ref|ZP_07868355.1| ribosome-associated GTPase EngA [Parascardovia denticolens DSM
10105 = JCM 12538]
gi|294485763|gb|EFG33397.1| ribosome-associated GTPase EngA [Parascardovia denticolens F0305]
gi|315120699|gb|EFT83831.1| ribosome-associated GTPase EngA [Parascardovia denticolens DSM
10105 = JCM 12538]
Length = 734
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 83/201 (41%), Positives = 106/201 (52%), Gaps = 34/201 (16%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+A++GRPNVGKS L NR++G AIV D PGVTRDR+ + W H+F LVDTGG
Sbjct: 287 IAVIGRPNVGKSTLVNRVLGHRAAIVEDTPGVTRDRVSYEAEWAGHDFKLVDTGGW---- 342
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
EA V + S I QA+ A+ + IIF+VDG G
Sbjct: 343 --------------------------EADVEGIDSAIADQASIAMNMADAIIFVVDGTVG 376
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
LT D+ IA LR + K + +AVNK +S + +EFW LG PLPISA+ G G
Sbjct: 377 LTQTDDRIASLLRSS--GKPVTVAVNKADS-QAAEYAAAEFWKLGLGEPLPISALHGRGV 433
Query: 345 GELLDLVCSELKKVEVCIGFL 365
G+LLD + L VE G L
Sbjct: 434 GDLLDAAVNSLSTVEKLTGSL 454
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 43/66 (65%)
Query: 156 GNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFML 215
G++ L RVA++GRPNVGKS+L N+L NR++V D G TRD + G+ +++
Sbjct: 452 GSLAASDLRRVALIGRPNVGKSSLLNQLAHENRSVVNDLAGTTRDPVDEVITIGDEKWLF 511
Query: 216 VDTGGV 221
+DT G+
Sbjct: 512 IDTAGI 517
>gi|15640782|ref|NP_230412.1| GTP-binding protein EngA [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121585667|ref|ZP_01675462.1| GTP-binding protein [Vibrio cholerae 2740-80]
gi|121726039|ref|ZP_01679338.1| GTP-binding protein [Vibrio cholerae V52]
gi|147675115|ref|YP_001216248.1| GTP-binding protein EngA [Vibrio cholerae O395]
gi|153817276|ref|ZP_01969943.1| GTP-binding protein [Vibrio cholerae NCTC 8457]
gi|153821375|ref|ZP_01974042.1| GTP-binding protein [Vibrio cholerae B33]
gi|227080942|ref|YP_002809493.1| GTP-binding protein EngA [Vibrio cholerae M66-2]
gi|227117137|ref|YP_002819033.1| GTP-binding protein [Vibrio cholerae O395]
gi|229505623|ref|ZP_04395133.1| GTP-binding protein EngA [Vibrio cholerae BX 330286]
gi|229510705|ref|ZP_04400184.1| GTP-binding protein EngA [Vibrio cholerae B33]
gi|229517827|ref|ZP_04407271.1| GTP-binding protein EngA [Vibrio cholerae RC9]
gi|229608641|ref|YP_002879289.1| GTP-binding protein EngA [Vibrio cholerae MJ-1236]
gi|254847900|ref|ZP_05237250.1| GTP-binding protein EngA [Vibrio cholerae MO10]
gi|255744569|ref|ZP_05418520.1| GTP-binding protein EngA [Vibrio cholera CIRS 101]
gi|262161296|ref|ZP_06030407.1| GTP-binding protein EngA [Vibrio cholerae INDRE 91/1]
gi|262168789|ref|ZP_06036484.1| GTP-binding protein EngA [Vibrio cholerae RC27]
gi|298499104|ref|ZP_07008911.1| ribosome-associated GTPase EngA [Vibrio cholerae MAK 757]
gi|360034670|ref|YP_004936433.1| GTP-binding protein EngA [Vibrio cholerae O1 str. 2010EL-1786]
gi|379740610|ref|YP_005332579.1| GTP-binding protein Der [Vibrio cholerae IEC224]
gi|417812806|ref|ZP_12459463.1| GTPase Der [Vibrio cholerae HC-49A2]
gi|417815671|ref|ZP_12462303.1| GTPase Der [Vibrio cholerae HCUF01]
gi|418331805|ref|ZP_12942745.1| GTPase Der [Vibrio cholerae HC-06A1]
gi|418336569|ref|ZP_12945467.1| GTPase Der [Vibrio cholerae HC-23A1]
gi|418343062|ref|ZP_12949856.1| GTPase Der [Vibrio cholerae HC-28A1]
gi|418348231|ref|ZP_12952965.1| GTPase Der [Vibrio cholerae HC-43A1]
gi|418354767|ref|ZP_12957488.1| GTPase Der [Vibrio cholerae HC-61A1]
gi|419825223|ref|ZP_14348728.1| ribosome-associated GTPase EngA [Vibrio cholerae CP1033(6)]
gi|421316576|ref|ZP_15767147.1| GTPase Der [Vibrio cholerae CP1032(5)]
gi|421320401|ref|ZP_15770958.1| GTPase Der [Vibrio cholerae CP1038(11)]
gi|421324397|ref|ZP_15774923.1| GTPase Der [Vibrio cholerae CP1041(14)]
gi|421328058|ref|ZP_15778572.1| GTPase Der [Vibrio cholerae CP1042(15)]
gi|421331076|ref|ZP_15781556.1| GTPase Der [Vibrio cholerae CP1046(19)]
gi|421334651|ref|ZP_15785118.1| GTPase Der [Vibrio cholerae CP1048(21)]
gi|421338544|ref|ZP_15788979.1| GTPase Der [Vibrio cholerae HC-20A2]
gi|421347329|ref|ZP_15797711.1| GTPase Der [Vibrio cholerae HC-46A1]
gi|422890866|ref|ZP_16933274.1| GTPase Der [Vibrio cholerae HC-40A1]
gi|422901741|ref|ZP_16937101.1| GTPase Der [Vibrio cholerae HC-48A1]
gi|422905966|ref|ZP_16940808.1| GTPase Der [Vibrio cholerae HC-70A1]
gi|422912561|ref|ZP_16947084.1| GTPase Der [Vibrio cholerae HFU-02]
gi|422925042|ref|ZP_16958071.1| GTPase Der [Vibrio cholerae HC-38A1]
gi|423144362|ref|ZP_17131975.1| GTPase Der [Vibrio cholerae HC-19A1]
gi|423149014|ref|ZP_17136372.1| GTPase Der [Vibrio cholerae HC-21A1]
gi|423152859|ref|ZP_17140056.1| GTPase Der [Vibrio cholerae HC-22A1]
gi|423155668|ref|ZP_17142776.1| GTPase Der [Vibrio cholerae HC-32A1]
gi|423159499|ref|ZP_17146470.1| GTPase Der [Vibrio cholerae HC-33A2]
gi|423164186|ref|ZP_17150971.1| GTPase Der [Vibrio cholerae HC-48B2]
gi|423730318|ref|ZP_17703635.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-17A1]
gi|423749162|ref|ZP_17711649.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-50A2]
gi|423892036|ref|ZP_17725722.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-62A1]
gi|423926811|ref|ZP_17730338.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-77A1]
gi|424001366|ref|ZP_17744454.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-17A2]
gi|424005522|ref|ZP_17748505.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-37A1]
gi|424023533|ref|ZP_17763196.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-62B1]
gi|424026336|ref|ZP_17765951.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-69A1]
gi|424585661|ref|ZP_18025254.1| GTPase Der [Vibrio cholerae CP1030(3)]
gi|424590001|ref|ZP_18029447.1| GTPase Der [Vibrio cholerae CP1037(10)]
gi|424594357|ref|ZP_18033694.1| GTPase Der [Vibrio cholerae CP1040(13)]
gi|424598222|ref|ZP_18037419.1| GTPase Der [Vibrio Cholerae CP1044(17)]
gi|424600975|ref|ZP_18040131.1| GTPase Der [Vibrio cholerae CP1047(20)]
gi|424605955|ref|ZP_18044919.1| GTPase Der [Vibrio cholerae CP1050(23)]
gi|424609788|ref|ZP_18048645.1| GTPase Der [Vibrio cholerae HC-39A1]
gi|424612591|ref|ZP_18051397.1| GTPase Der [Vibrio cholerae HC-41A1]
gi|424616412|ref|ZP_18055102.1| GTPase Der [Vibrio cholerae HC-42A1]
gi|424621350|ref|ZP_18059877.1| GTPase Der [Vibrio cholerae HC-47A1]
gi|424644327|ref|ZP_18082080.1| GTPase Der [Vibrio cholerae HC-56A2]
gi|424651971|ref|ZP_18089492.1| GTPase Der [Vibrio cholerae HC-57A2]
gi|424655918|ref|ZP_18093219.1| GTPase Der [Vibrio cholerae HC-81A2]
gi|440709050|ref|ZP_20889708.1| GTP-binding protein EngA [Vibrio cholerae 4260B]
gi|443502864|ref|ZP_21069852.1| GTPase Der [Vibrio cholerae HC-64A1]
gi|443506777|ref|ZP_21073566.1| GTPase Der [Vibrio cholerae HC-65A1]
gi|443510884|ref|ZP_21077547.1| GTPase Der [Vibrio cholerae HC-67A1]
gi|443514446|ref|ZP_21080984.1| GTPase Der [Vibrio cholerae HC-68A1]
gi|443518259|ref|ZP_21084675.1| GTPase Der [Vibrio cholerae HC-71A1]
gi|443523126|ref|ZP_21089365.1| GTPase Der [Vibrio cholerae HC-72A2]
gi|443530758|ref|ZP_21096773.1| GTPase Der [Vibrio cholerae HC-7A1]
gi|443534515|ref|ZP_21100426.1| GTPase Der [Vibrio cholerae HC-80A1]
gi|443538107|ref|ZP_21103962.1| GTPase Der [Vibrio cholerae HC-81A1]
gi|449056713|ref|ZP_21735381.1| GTP-binding protein EngA [Vibrio cholerae O1 str. Inaba G4222]
gi|26006742|sp|Q9KTW7.1|DER_VIBCH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|172047436|sp|A5F3E6.1|DER_VIBC3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|254783177|sp|C3LT16.1|DER_VIBCM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|9655209|gb|AAF93928.1| GTP-binding protein [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121550030|gb|EAX60046.1| GTP-binding protein [Vibrio cholerae 2740-80]
gi|121631521|gb|EAX63891.1| GTP-binding protein [Vibrio cholerae V52]
gi|126512192|gb|EAZ74786.1| GTP-binding protein [Vibrio cholerae NCTC 8457]
gi|126521085|gb|EAZ78308.1| GTP-binding protein [Vibrio cholerae B33]
gi|146316998|gb|ABQ21537.1| GTP-binding protein [Vibrio cholerae O395]
gi|227008830|gb|ACP05042.1| GTP-binding protein [Vibrio cholerae M66-2]
gi|227012587|gb|ACP08797.1| GTP-binding protein [Vibrio cholerae O395]
gi|229344542|gb|EEO09516.1| GTP-binding protein EngA [Vibrio cholerae RC9]
gi|229350670|gb|EEO15611.1| GTP-binding protein EngA [Vibrio cholerae B33]
gi|229357846|gb|EEO22763.1| GTP-binding protein EngA [Vibrio cholerae BX 330286]
gi|229371296|gb|ACQ61719.1| GTP-binding protein EngA [Vibrio cholerae MJ-1236]
gi|254843605|gb|EET22019.1| GTP-binding protein EngA [Vibrio cholerae MO10]
gi|255737600|gb|EET92994.1| GTP-binding protein EngA [Vibrio cholera CIRS 101]
gi|262022907|gb|EEY41613.1| GTP-binding protein EngA [Vibrio cholerae RC27]
gi|262029046|gb|EEY47699.1| GTP-binding protein EngA [Vibrio cholerae INDRE 91/1]
gi|297543437|gb|EFH79487.1| ribosome-associated GTPase EngA [Vibrio cholerae MAK 757]
gi|340041397|gb|EGR02363.1| GTPase Der [Vibrio cholerae HCUF01]
gi|340042110|gb|EGR03075.1| GTPase Der [Vibrio cholerae HC-49A2]
gi|341624726|gb|EGS50210.1| GTPase Der [Vibrio cholerae HC-70A1]
gi|341625943|gb|EGS51364.1| GTPase Der [Vibrio cholerae HC-48A1]
gi|341626538|gb|EGS51911.1| GTPase Der [Vibrio cholerae HC-40A1]
gi|341640347|gb|EGS64937.1| GTPase Der [Vibrio cholerae HFU-02]
gi|341648039|gb|EGS72106.1| GTPase Der [Vibrio cholerae HC-38A1]
gi|356419967|gb|EHH73497.1| GTPase Der [Vibrio cholerae HC-06A1]
gi|356420915|gb|EHH74423.1| GTPase Der [Vibrio cholerae HC-21A1]
gi|356425764|gb|EHH79110.1| GTPase Der [Vibrio cholerae HC-19A1]
gi|356432147|gb|EHH85344.1| GTPase Der [Vibrio cholerae HC-23A1]
gi|356433750|gb|EHH86935.1| GTPase Der [Vibrio cholerae HC-22A1]
gi|356437500|gb|EHH90589.1| GTPase Der [Vibrio cholerae HC-28A1]
gi|356442569|gb|EHH95408.1| GTPase Der [Vibrio cholerae HC-32A1]
gi|356446970|gb|EHH99760.1| GTPase Der [Vibrio cholerae HC-43A1]
gi|356449798|gb|EHI02536.1| GTPase Der [Vibrio cholerae HC-33A2]
gi|356453169|gb|EHI05832.1| GTPase Der [Vibrio cholerae HC-61A1]
gi|356456131|gb|EHI08742.1| GTPase Der [Vibrio cholerae HC-48B2]
gi|356645824|gb|AET25879.1| GTP-binding protein EngA [Vibrio cholerae O1 str. 2010EL-1786]
gi|378794120|gb|AFC57591.1| GTP-binding protein Der [Vibrio cholerae IEC224]
gi|395920067|gb|EJH30889.1| GTPase Der [Vibrio cholerae CP1041(14)]
gi|395921533|gb|EJH32353.1| GTPase Der [Vibrio cholerae CP1032(5)]
gi|395923383|gb|EJH34194.1| GTPase Der [Vibrio cholerae CP1038(11)]
gi|395929564|gb|EJH40313.1| GTPase Der [Vibrio cholerae CP1042(15)]
gi|395932340|gb|EJH43083.1| GTPase Der [Vibrio cholerae CP1046(19)]
gi|395936512|gb|EJH47235.1| GTPase Der [Vibrio cholerae CP1048(21)]
gi|395943492|gb|EJH54166.1| GTPase Der [Vibrio cholerae HC-20A2]
gi|395946389|gb|EJH57053.1| GTPase Der [Vibrio cholerae HC-46A1]
gi|395961840|gb|EJH72150.1| GTPase Der [Vibrio cholerae HC-56A2]
gi|395963277|gb|EJH73549.1| GTPase Der [Vibrio cholerae HC-57A2]
gi|395965959|gb|EJH76095.1| GTPase Der [Vibrio cholerae HC-42A1]
gi|395974215|gb|EJH83748.1| GTPase Der [Vibrio cholerae HC-47A1]
gi|395977209|gb|EJH86628.1| GTPase Der [Vibrio cholerae CP1030(3)]
gi|395978642|gb|EJH88017.1| GTPase Der [Vibrio cholerae CP1047(20)]
gi|408009248|gb|EKG47163.1| GTPase Der [Vibrio cholerae HC-39A1]
gi|408016028|gb|EKG53589.1| GTPase Der [Vibrio cholerae HC-41A1]
gi|408035824|gb|EKG72279.1| GTPase Der [Vibrio cholerae CP1037(10)]
gi|408036560|gb|EKG72985.1| GTPase Der [Vibrio cholerae CP1040(13)]
gi|408044449|gb|EKG80367.1| GTPase Der [Vibrio Cholerae CP1044(17)]
gi|408046043|gb|EKG81764.1| GTPase Der [Vibrio cholerae CP1050(23)]
gi|408056517|gb|EKG91395.1| GTPase Der [Vibrio cholerae HC-81A2]
gi|408610760|gb|EKK84125.1| ribosome-associated GTPase EngA [Vibrio cholerae CP1033(6)]
gi|408626831|gb|EKK99665.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-17A1]
gi|408639980|gb|EKL11782.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-50A2]
gi|408657812|gb|EKL28888.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-77A1]
gi|408658868|gb|EKL29926.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-62A1]
gi|408847957|gb|EKL88013.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-37A1]
gi|408848885|gb|EKL88921.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-17A2]
gi|408872901|gb|EKM12109.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-62B1]
gi|408880923|gb|EKM19838.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-69A1]
gi|439975350|gb|ELP51473.1| GTP-binding protein EngA [Vibrio cholerae 4260B]
gi|443432761|gb|ELS75283.1| GTPase Der [Vibrio cholerae HC-64A1]
gi|443436586|gb|ELS82704.1| GTPase Der [Vibrio cholerae HC-65A1]
gi|443440148|gb|ELS89838.1| GTPase Der [Vibrio cholerae HC-67A1]
gi|443444242|gb|ELS97517.1| GTPase Der [Vibrio cholerae HC-68A1]
gi|443448080|gb|ELT04716.1| GTPase Der [Vibrio cholerae HC-71A1]
gi|443450854|gb|ELT11119.1| GTPase Der [Vibrio cholerae HC-72A2]
gi|443457841|gb|ELT25237.1| GTPase Der [Vibrio cholerae HC-7A1]
gi|443462299|gb|ELT33339.1| GTPase Der [Vibrio cholerae HC-80A1]
gi|443465696|gb|ELT40355.1| GTPase Der [Vibrio cholerae HC-81A1]
gi|448263881|gb|EMB01121.1| GTP-binding protein EngA [Vibrio cholerae O1 str. Inaba G4222]
Length = 494
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/196 (41%), Positives = 112/196 (57%), Gaps = 40/196 (20%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YG++ GEHEF+++DTGG+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
S+ + +A +Q+ AAI+E+ V++F+VD
Sbjct: 61 ---DGSEEGVETKMA---------------------------QQSLAAIDEADVVLFMVD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSPL-PIS 337
G+AGLT ADE IA LR+ ++K IL VNK + GI +EFW LG + I+
Sbjct: 91 GRAGLTVADEAIAQHLRR--IEKPAILVVNKVD----GIDADAASAEFWQLGMDQMYQIA 144
Query: 338 AISGTGTGELLDLVCS 353
A G G G L+D V +
Sbjct: 145 AAHGRGVGALIDRVLN 160
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 100/220 (45%), Gaps = 40/220 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS L NR++G R +V D PG TRD +Y E E++L+DT GV
Sbjct: 207 KLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMKRDEREYVLIDTAGVRRR 266
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + E ++ T+ AIE++ V++ +VD +
Sbjct: 267 KRINETV-EKFSVVKTL--------------------------QAIEDANVVLLVVDARE 299
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPR---KGIMQVSEFWSLGFSPLP----IS 337
++ D + + + + I++AVNK + K ++ LGF IS
Sbjct: 300 NISDQDLSLLGFALNS--GRSIVIAVNKWDGLSFDVKEHVKKELDRRLGFVDFARIHFIS 357
Query: 338 AISGTGTGELLDLVCSELKKVEVCIGFLLICNAITKIFHI 377
A+ GTG G L + V + +G + +T+I +
Sbjct: 358 ALHGTGVGHLFESVQEAYRSATTRVG----TSVLTRIMKM 393
>gi|402299917|ref|ZP_10819480.1| GTP-binding protein Der [Bacillus alcalophilus ATCC 27647]
gi|401724956|gb|EJS98278.1| GTP-binding protein Der [Bacillus alcalophilus ATCC 27647]
Length = 437
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 80/190 (42%), Positives = 109/190 (57%), Gaps = 34/190 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG AIV D PGVTRDR+Y + W +F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIVGERVAIVEDMPGVTRDRLYSKGEWLNRDFNLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+G E + + RE QA AI+E+ VI+F+V+G+
Sbjct: 62 ----------------ELGDEPLLVQMRE------------QAELAIKEADVIVFIVNGK 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T AD+E+A L ++ K ++L VNK ++P ++ EF+SLG P PIS G
Sbjct: 94 EGITGADQEVAKLLFRS--KKPVVLGVNKIDNPEMR-EELYEFYSLGIGEPYPISGSHGL 150
Query: 343 GTGELLDLVC 352
G G+LLD V
Sbjct: 151 GLGDLLDAVI 160
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 99/203 (48%), Gaps = 42/203 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R++++GRPNVGKS+L N ++G R IV + PG TRD + E +++L+DT G+
Sbjct: 177 RISLIGRPNVGKSSLVNAMLGEERVIVSNIPGTTRDAIDTPFTKDEQKYVLIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R + AIE S V++ +++ +
Sbjct: 234 -RKRGKVYE---------------STEKYSVLR--------SLKAIERSNVVLIVINAEE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRK--GIMQ------VSEFWSLGFSP-LP 335
G+ D++IA + + + +I+ VNK ++ K MQ EF L ++P L
Sbjct: 270 GIIEQDKKIAGYAHE--AGRAVIIVVNKWDTVVKDDKTMQNFEQKIRDEFLFLSYAPVLF 327
Query: 336 ISAISGTGTGELLDLVCSELKKV 358
+SA T + L V + KV
Sbjct: 328 LSA----KTKQRLQFVLPAVNKV 346
>gi|379730094|ref|YP_005322290.1| gtp-binding protein enga [Saprospira grandis str. Lewin]
gi|378575705|gb|AFC24706.1| gtp-binding protein enga [Saprospira grandis str. Lewin]
Length = 433
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 108/185 (58%), Gaps = 33/185 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS FNR++G +AIV D GVTRDR YG + W F LVDTGG +
Sbjct: 5 VAIVGRPNVGKSTFFNRMLGMRQAIVDDVSGVTRDRQYGSTEWNGKRFHLVDTGGFIGDG 64
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
ED+ + I +Q AIEE+ V++F+VD + G
Sbjct: 65 -------EDV----------------------FAAAIRKQVRMAIEEAQVVVFMVDVETG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGTGT 344
+T D ++ L++ ++K ++LAVNK ++ + +M + EFW++GF L PIS+ SG+GT
Sbjct: 96 ITDLDAQVGRLLKE--INKPVLLAVNKVDNNERQLM-IHEFWAMGFDNLYPISSTSGSGT 152
Query: 345 GELLD 349
G+LLD
Sbjct: 153 GDLLD 157
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 89/194 (45%), Gaps = 37/194 (19%)
Query: 155 IGNVPE--HLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHE 212
I +PE + LP +AIVGRPN GKS+ N L+ R+IV D G TRD ++ E
Sbjct: 163 IPGIPEEDNRLPHIAIVGRPNAGKSSFVNLLLDEERSIVTDIAGTTRDSVHAHYNKFGQE 222
Query: 213 FMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEE 272
F+LVDT G+ + + ++ EDL + + +A ++E
Sbjct: 223 FILVDTAGL----RRKRSVKEDLEFYSVL-----------------------RAIRSLES 255
Query: 273 SCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS---- 328
+ + + ++D G+ A D I KN +K I++ VNK + K + E+
Sbjct: 256 ADICVLMLDASKGIEAQDLNIFRLAIKN--NKGIVIFVNKWDLVEKSTNTLKEYEDHIRE 313
Query: 329 --LGFSPLPISAIS 340
FS +PI IS
Sbjct: 314 RIAPFSDVPIVFIS 327
>gi|422820667|ref|ZP_16868860.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK353]
gi|324991285|gb|EGC23218.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK353]
Length = 436
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 111/200 (55%), Gaps = 34/200 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATANWLNRKFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K IILAVNK ++P ++ +F++LG P P+S++ G
Sbjct: 93 KEGITDADEYVARMLYKTH--KPIILAVNKVDNPEMR-NEIFDFYALGLGDPFPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEVC 361
GTG++LD + L EV
Sbjct: 150 IGTGDVLDAIVENLPNEEVV 169
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 89/197 (45%), Gaps = 39/197 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G R I G TRD + E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEERVIASPVAGTTRDAIDTVFTDSEGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPLP 335
G+ D+ IA + + K +I+ VNK ++ K + +F L ++P+
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGMIIVVNKWDTLEKDNHTMKDWEADIRDQFQYLSYAPII 326
Query: 336 -ISAISGTGTGELLDLV 351
+SA++ +L D++
Sbjct: 327 FVSALTKQRLHKLPDMI 343
>gi|342217218|ref|ZP_08709865.1| ribosome-associated GTPase EngA [Peptoniphilus sp. oral taxon 375
str. F0436]
gi|341588108|gb|EGS31508.1| ribosome-associated GTPase EngA [Peptoniphilus sp. oral taxon 375
str. F0436]
Length = 440
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 83/195 (42%), Positives = 115/195 (58%), Gaps = 33/195 (16%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
V IVG+PNVGKS+LFN++VG +I D PGVTRDR+YGR+ W EF+L+DTGG L+V
Sbjct: 6 VCIVGKPNVGKSSLFNKIVGQRISITEDTPGVTRDRIYGRASWLGREFILIDTGG-LDV- 63
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
KS M+++ + QA A+E S VIIFLVDG
Sbjct: 64 KSDDTFMKNIRL---------------------------QADIALETSNVIIFLVDGVES 96
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+TA D ++A+ LR+ +K +ILAVNK +S +K + +F+ LGF P+ +SA G G
Sbjct: 97 VTAMDRDLANRLRQT--NKKVILAVNKLDS-KKTKENMYDFYELGFGEPIFVSAEQGQGI 153
Query: 345 GELLDLVCSELKKVE 359
G+LLD V + V+
Sbjct: 154 GDLLDKVIEDFPVVD 168
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 94/196 (47%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
RV+ +G+PNVGKS+L N ++G NR IV + PG TRD + + + +++ VDT G+
Sbjct: 177 RVSFIGKPNVGKSSLINYILGENRNIVTNIPGTTRDSIDSYFTYKDTDYIFVDTAGLRKR 236
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K + I R +AV + S I+ S + + +VD
Sbjct: 237 KKIEEKI------------------ERYSAVRTLSS---------IDRSHICVLMVDATE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI-------MQVSEFWSLG-FSPLP- 335
G++ D +I + +K +I+AVNK ++ K ++ E S ++PL
Sbjct: 270 GISEQDTKIMGYAHD--QNKGLIIAVNKWDAVEKETNTMRAYEKEIREKLSFASYAPLVF 327
Query: 336 ISAISGTGTGELLDLV 351
ISA +G +LLDL+
Sbjct: 328 ISAKTGQRVTQLLDLI 343
>gi|420237054|ref|ZP_14741527.1| bifunctional cytidylate kinase/GTPase Der [Parascardovia
denticolens IPLA 20019]
gi|391879750|gb|EIT88254.1| bifunctional cytidylate kinase/GTPase Der [Parascardovia
denticolens IPLA 20019]
Length = 722
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 83/201 (41%), Positives = 106/201 (52%), Gaps = 34/201 (16%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+A++GRPNVGKS L NR++G AIV D PGVTRDR+ + W H+F LVDTGG
Sbjct: 287 IAVIGRPNVGKSTLVNRVLGHRAAIVEDTPGVTRDRVSYEAEWAGHDFKLVDTGGW---- 342
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
EA V + S I QA+ A+ + IIF+VDG G
Sbjct: 343 --------------------------EADVEGIDSAIADQASIAMNMADAIIFVVDGTVG 376
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
LT D+ IA LR + K + +AVNK +S + +EFW LG PLPISA+ G G
Sbjct: 377 LTQTDDRIASLLRSS--GKPVTVAVNKADS-QAAEYAAAEFWKLGLGEPLPISALHGRGV 433
Query: 345 GELLDLVCSELKKVEVCIGFL 365
G+LLD + L VE G L
Sbjct: 434 GDLLDAAVNSLSTVEKLTGSL 454
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 43/66 (65%)
Query: 156 GNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFML 215
G++ L RVA++GRPNVGKS+L N+L NR++V D G TRD + G+ +++
Sbjct: 452 GSLAASDLRRVALIGRPNVGKSSLLNQLAHENRSVVNDLAGTTRDPVDEVITIGDEKWLF 511
Query: 216 VDTGGV 221
+DT G+
Sbjct: 512 IDTAGI 517
>gi|225181110|ref|ZP_03734557.1| small GTP-binding protein [Dethiobacter alkaliphilus AHT 1]
gi|225168307|gb|EEG77111.1| small GTP-binding protein [Dethiobacter alkaliphilus AHT 1]
Length = 440
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 86/195 (44%), Positives = 106/195 (54%), Gaps = 40/195 (20%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEP--GVTRDRMYGRSFWGEHEFMLVDTGGV 221
P VAIVGRPNVGKS LFNRL+ R + ++EP GVTRDR+YGR+ W HEF L+DTGG
Sbjct: 4 PVVAIVGRPNVGKSTLFNRLI--QRRLAIEEPTAGVTRDRIYGRADWTGHEFWLIDTGG- 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
L E ++R I RQ A+EE+ VIIF+VD
Sbjct: 61 --------------------------LTFEEDKISR---EIHRQVKLAMEEANVIIFVVD 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
++G D E+A LRK K +ILA NK ESP +SEF++LG P S
Sbjct: 92 VRSGPVTLDYEVAAMLRKT--TKPVILAANKAESPN---FDMSEFYALGLGEPTLTSGAH 146
Query: 341 GTGTGELLDLVCSEL 355
G GTG+LLD V L
Sbjct: 147 GLGTGDLLDEVAKHL 161
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 90/202 (44%), Gaps = 41/202 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
RVAI+GRPNVGKS+L N+L G R IV D PG TRD + +++ VDT G+
Sbjct: 175 RVAIIGRPNVGKSSLTNKLSGTERVIVSDMPGTTRDAIDLLIERDNRKYLFVDTAGIRRK 234
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK + A +V R + A E + V++ L+D
Sbjct: 235 SK-------------------VDEAVEYYSVLR--------SIRAAESADVVLMLIDAAE 267
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSP-LP 335
G+T D+ IA + + +++ VNK + K + E + ++P L
Sbjct: 268 GVTEQDKRIAGIAHE--AGRALVIVVNKWDKVEKDDKTMDAYRDNLRDELAYITYAPILF 325
Query: 336 ISAISGTGTG---ELLDLVCSE 354
ISA++G EL+D V +
Sbjct: 326 ISALTGQRVQRVYELIDYVAEQ 347
>gi|157150518|ref|YP_001449828.1| GTP-binding protein EngA [Streptococcus gordonii str. Challis
substr. CH1]
gi|189037167|sp|A8AVL8.1|DER_STRGC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|157075312|gb|ABV09995.1| GTP-binding protein engA [Streptococcus gordonii str. Challis
substr. CH1]
Length = 436
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 111/200 (55%), Gaps = 34/200 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATADWLNRKFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K IILAVNK ++P ++ +F++LG P P+S++ G
Sbjct: 93 KEGITDADEYVARMLYKTH--KPIILAVNKVDNPEMR-NEIFDFYALGLGDPFPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEVC 361
GTG++LD + L EV
Sbjct: 150 IGTGDVLDAIVENLPNEEVA 169
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 89/197 (45%), Gaps = 39/197 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G R I G TRD + E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEERVIASPVAGTTRDAIDTVFTDSEGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPLP 335
G+ D+ IA + + K I++ VNK ++ K + +F L ++P+
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGIVIVVNKWDTLEKDNHTMKDWEADIRDQFQYLSYAPII 326
Query: 336 -ISAISGTGTGELLDLV 351
+SA++ +L D++
Sbjct: 327 FVSALTKQRLHKLPDMI 343
>gi|410727128|ref|ZP_11365351.1| ribosome-associated GTPase EngA [Clostridium sp. Maddingley
MBC34-26]
gi|410599463|gb|EKQ54016.1| ribosome-associated GTPase EngA [Clostridium sp. Maddingley
MBC34-26]
Length = 438
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 81/195 (41%), Positives = 109/195 (55%), Gaps = 33/195 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L G +IV D PGVTRDR+Y + W + F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAGKRISIVQDTPGVTRDRVYAEAEWLSYNFTMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P +D+ + + RQA AIE + VI+F+VDG+
Sbjct: 62 ----EPE-RDDIIV----------------------KQMRRQANIAIETADVIVFIVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLTAAD E+A LRK+ K ++L VNK +S K EF++LG P+ ISA G
Sbjct: 95 EGLTAADNEVATMLRKS--KKPVVLVVNKVDSL-KDEDNAWEFYNLGIGDPITISASQGL 151
Query: 343 GTGELLDLVCSELKK 357
G G++LD + K
Sbjct: 152 GLGDMLDKIVENFDK 166
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 100/212 (47%), Gaps = 40/212 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R+A++G+PNVGKS+L N+L+G R IV D PG TRD + E +F+L+DT G+
Sbjct: 178 RIAMIGKPNVGKSSLINKLLGEERVIVSDIPGTTRDAIDSYLETEEGKFILIDTAGLRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK + I E ++ T AAIE + V I ++D
Sbjct: 238 SKVKEEI-ERYSVVRTY--------------------------AAIERADVCILMIDATE 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF-----WSLGF----SPLP 335
G+T DE+I + + M K I++ VNK + K + +F +L F L
Sbjct: 271 GITEQDEKIIGYAHE--MRKAIMVIVNKWDLVEKDDKTLDKFKKELQGNLKFLSYAEYLF 328
Query: 336 ISAISGTGTGELLDLV--CSELKKVEVCIGFL 365
ISA++G T ++L + C + V G L
Sbjct: 329 ISALTGQRTNKVLQVAKYCYDNYNKRVSTGIL 360
>gi|339641454|ref|ZP_08662898.1| ribosome-associated GTPase EngA [Streptococcus sp. oral taxon 056
str. F0418]
gi|339454723|gb|EGP67338.1| ribosome-associated GTPase EngA [Streptococcus sp. oral taxon 056
str. F0418]
Length = 436
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 111/200 (55%), Gaps = 34/200 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATADWLNRKFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K IILAVNK ++P ++ +F++LG P P+S++ G
Sbjct: 93 KEGITDADEYVARMLYKTH--KPIILAVNKVDNPEMR-NEIFDFYALGLGDPFPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEVC 361
GTG++LD + L EV
Sbjct: 150 IGTGDVLDAIVENLPNEEVA 169
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 89/197 (45%), Gaps = 39/197 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G R I G TRD + E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEERVIASPVAGTTRDAIDTVFTDSEGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPLP 335
G+ D+ IA + + K +I+ VNK ++ K + +F L ++P+
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGMIIVVNKWDTLEKDNHTMKNWEEDIREQFQYLSYAPII 326
Query: 336 -ISAISGTGTGELLDLV 351
+SA++ +L D++
Sbjct: 327 FVSALTKQRLHKLPDMI 343
>gi|225352117|ref|ZP_03743140.1| hypothetical protein BIFPSEUDO_03732 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
gi|225157364|gb|EEG70703.1| hypothetical protein BIFPSEUDO_03732 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
Length = 709
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 114/314 (36%), Positives = 146/314 (46%), Gaps = 47/314 (14%)
Query: 60 RHLRSLSPSNDAVSSSNDDAFE--DSPFEDEDDDAEYEDVDDESDGQDFGIDVDALEREA 117
R R S D V S N A + DS + AE D SD +FG +D L R
Sbjct: 168 RQARRSGQSTDGVGSENVAARDAADSKVTNFTSAAEGVLTVDNSD-LNFGETLDVLVRIV 226
Query: 118 KDAV-----REYSSLLSRQLIIQDETDDRKDSGKKQKKRKTTIGNVPEHLLPRVAIVGRP 172
DA+ R+Y+S L + DE D+ G + G P +L A+VGRP
Sbjct: 227 DDAIEEQQYRQYASNLDDYEL--DEGDEGLIDGSSFVGGERRSGPKPVGVL---AVVGRP 281
Query: 173 NVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIM 232
NVGKS L NR++G A+V D PGVTRDR+ + W +F LVDTGG
Sbjct: 282 NVGKSTLVNRILGRRAAVVEDTPGVTRDRVSYDAEWAGTDFKLVDTGGW----------- 330
Query: 233 EDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGLTAADEE 292
EA V + S I QA A++ + ++ +VDGQ GLT DE
Sbjct: 331 -------------------EADVEGIESAIASQAQIAVQLADAVVLVVDGQVGLTNTDER 371
Query: 293 IADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGTGELLDLV 351
I LR + K + LAVNK + R+ +EFW +G P ISA+ G G GELLD
Sbjct: 372 IVKMLRAS--GKPVTLAVNKVDD-RESEYLTAEFWKMGLGEPYGISAMHGRGIGELLDAA 428
Query: 352 CSELKKVEVCIGFL 365
LKK E GFL
Sbjct: 429 LDSLKKAEKTSGFL 442
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 148 QKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSF 207
+K KT+ P HL RVA+VGRPNVGKS+L N+L R +V D G TRD +
Sbjct: 433 KKAEKTSGFLTPSHL-RRVALVGRPNVGKSSLLNQLAHEERTVVNDLAGTTRDPVDEVVT 491
Query: 208 WGEHEFMLVDTGGV 221
+++ +DT G+
Sbjct: 492 VDGEDWLFIDTAGI 505
>gi|323499818|ref|ZP_08104777.1| GTP-binding protein Der [Vibrio sinaloensis DSM 21326]
gi|323315059|gb|EGA68111.1| GTP-binding protein Der [Vibrio sinaloensis DSM 21326]
Length = 494
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 82/196 (41%), Positives = 111/196 (56%), Gaps = 40/196 (20%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YG++ GEHEF+++DTGG+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
T E +M +Q+ AAI+E+ V++F+VD
Sbjct: 61 D--------------------------GTEEGVETKMA----QQSLAAIDEADVVLFMVD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSPL-PIS 337
G+AGLTAADE IA LRK ++K +L VNK + GI +EFW LG + I+
Sbjct: 91 GRAGLTAADEAIAQHLRK--LEKPSMLVVNKVD----GIDADAASAEFWQLGVENMYQIA 144
Query: 338 AISGTGTGELLDLVCS 353
A G G L+DL +
Sbjct: 145 AAHGRGVTALIDLALN 160
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 100/220 (45%), Gaps = 40/220 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS L NR++G R +V D PG TRD +Y E++L+DT GV
Sbjct: 208 KLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRRR 267
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
++ + E ++ T+ A+E++ V++ ++D +
Sbjct: 268 TRINETV-EKFSVVKTL--------------------------KAVEDANVVMLVIDARE 300
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSEFWSLGFSPLP----IS 337
++ D + + + I++AVNK ++ K ++ LGF IS
Sbjct: 301 NISDQDLSLLGFALN--AGRSIVIAVNKWDGLDTDVKEHVKKELDRRLGFVDFARIHFIS 358
Query: 338 AISGTGTGELLDLVCSELKKVEVCIGFLLICNAITKIFHI 377
A+ GTG G L + V K +G + +T+I +
Sbjct: 359 ALHGTGVGHLFESVQEAYKSATTRVG----TSVLTRIMKM 394
>gi|422854874|ref|ZP_16901538.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK160]
gi|325696369|gb|EGD38260.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK160]
Length = 436
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 77/200 (38%), Positives = 111/200 (55%), Gaps = 34/200 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATASWLNRKFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K IILAVNK ++P ++ +F++LG P P+S++ G
Sbjct: 93 KEGITDADEYVARMLYKTH--KPIILAVNKVDNPEMR-NEIFDFYALGLGDPFPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEVC 361
GTG++LD + L E+
Sbjct: 150 IGTGDVLDAIVENLPNEEIA 169
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 89/197 (45%), Gaps = 39/197 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G R I G TRD + E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEERVIASPVAGTTRDAIDTVFTDSEGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPLP 335
G+ D+ IA + + K +I+ VNK ++ K + +F L ++P+
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGMIIVVNKWDTLEKDNHTMKDWEADIRDQFQYLSYAPII 326
Query: 336 -ISAISGTGTGELLDLV 351
+SA++ +L D++
Sbjct: 327 FVSALTKQRLHKLPDMI 343
>gi|300854433|ref|YP_003779417.1| GTP-binding protein [Clostridium ljungdahlii DSM 13528]
gi|300434548|gb|ADK14315.1| putative GTP-binding protein [Clostridium ljungdahlii DSM 13528]
Length = 438
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 109/194 (56%), Gaps = 33/194 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L G +IV D PGVTRDR+Y + W ++ F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAGKRISIVEDTPGVTRDRVYAEAEWLKYNFTIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P D+ I S + RQA A+E + IIF+VDG+
Sbjct: 62 ----EPE-STDVII----------------------SQMRRQAQVAVETADTIIFIVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TAAD E+A LRK+ K ++L VNK ++ + V EF++LG P+ ISA
Sbjct: 95 EGVTAADREVAQMLRKS--KKPVVLVVNKIDNINQN-AYVYEFYNLGIGEPMAISASQAL 151
Query: 343 GTGELLDLVCSELK 356
G G++LD V K
Sbjct: 152 GLGDMLDKVVENFK 165
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 95/198 (47%), Gaps = 42/198 (21%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRM--YGRSFWGEHEFMLVDTGGVL 222
+VA +G+PNVGKS+L N+L+G R IV D PG TRD + Y + +G + +L+DT G+
Sbjct: 178 KVAFIGKPNVGKSSLINKLLGEERVIVSDIPGTTRDAVDSYLETDYG--KLLLIDTAGLR 235
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
SK + I +V R + IER + CV+I +D
Sbjct: 236 KKSKVKEEI-------------------ERYSVIRTYTAIERA------DVCVLI--LDA 268
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF-----WSLGFSP---- 333
++ DE+I + + + K I++ +NK + K V ++ SL F P
Sbjct: 269 VHNISEQDEKIIGYAHE--LSKSIMVIINKWDLIDKDTKTVDKYKTEIGTSLSFMPYAPY 326
Query: 334 LPISAISGTGTGELLDLV 351
L ISA +G ++L L+
Sbjct: 327 LFISAKTGQRVNKVLQLI 344
>gi|227515173|ref|ZP_03945222.1| GTP-binding protein EngA [Lactobacillus fermentum ATCC 14931]
gi|227086505|gb|EEI21817.1| GTP-binding protein EngA [Lactobacillus fermentum ATCC 14931]
Length = 437
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 108/193 (55%), Gaps = 34/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNR+ G AIV D PGVTRDR+Y W F ++DTGG
Sbjct: 4 PVVAIVGRPNVGKSTLFNRIAGERIAIVEDTPGVTRDRLYAHGEWLGKNFSMIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I M PL T+ I +QA AIEE+ VII +V+ +
Sbjct: 61 -----------------IEMSDQPLLTQ----------IRQQAEIAIEEADVIIMVVNVE 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE++A L ++ +K ++LAVNK ++P + + V +F+ LG P P+S++ G
Sbjct: 94 NGVTDADEQVAQILYRS--NKPVVLAVNKVDNPERR-LDVYDFYQLGLGEPYPVSSVHGV 150
Query: 343 GTGELLDLVCSEL 355
G G++LD V
Sbjct: 151 GLGDMLDAVIENF 163
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 33/168 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
R + +GRPNVGKS+L N ++G NR IV D G TRD + F + EF +VDT G+
Sbjct: 176 RFSFIGRPNVGKSSLVNAILGENRVIVSDMAGTTRDAI-NTQFTAKDGREFTMVDTAGIK 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T A+ R + AI++S V++ +++
Sbjct: 235 KKGKLYEN-------------------TERYALMR--------SMRAIDDSDVVLVVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCES-PRKGIMQVSEFWSL 329
+ G+ D+ IA + + + +I+ VNK ++ P + +++F +L
Sbjct: 268 EEGIRELDKHIAGYAHE--AGRAVIIVVNKWDTIPDRDQRTMTDFTNL 313
>gi|374579680|ref|ZP_09652774.1| ribosome-associated GTPase EngA [Desulfosporosinus youngiae DSM
17734]
gi|374415762|gb|EHQ88197.1| ribosome-associated GTPase EngA [Desulfosporosinus youngiae DSM
17734]
Length = 443
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 86/193 (44%), Positives = 109/193 (56%), Gaps = 31/193 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNR+ GG AIV + PGVTRDR+Y + W +F L+DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNRITGGLVAIVENMPGVTRDRLYRDAEWLGRKFSLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
EG P++ S + RQA A+EE+ VIIF+VD Q
Sbjct: 62 ----------------EFKDEGTPIS----------SQMRRQAEIAMEEADVIIFVVDAQ 95
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
T D+ IA LR++ K ++LA NK E K Q+ +F SLG +PISA+ G
Sbjct: 96 ISPTPDDDIIARTLRRS--GKPVLLAANKVEDFAKIEGQLYDFLSLGLGEAIPISAVHGM 153
Query: 343 GTGELLDLVCSEL 355
TG+LLDLV S L
Sbjct: 154 NTGDLLDLVISNL 166
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 102/199 (51%), Gaps = 44/199 (22%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHE---FMLVDTGGV 221
R++++GRPNVGKS+L N L+G R IV + PG TRD + F EHE ++L+DT G+
Sbjct: 180 RISVIGRPNVGKSSLVNTLLGKERVIVSNVPGTTRDAI-DTPF--EHEGRHYILIDTAGM 236
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
++ +E+L T + +V R + A++ S I+ L+D
Sbjct: 237 RRKAR-----IEEL--------------TEQYSVVR--------SLRAVDRSDAILMLID 269
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----LGF---SP 333
G+T D++IA + + K IIL VNK + K +++F LGF +P
Sbjct: 270 AVDGVTEQDKKIAGY--ADEAGKAIILIVNKWDLIEKDEKTINKFEKSIREELGFMQYAP 327
Query: 334 -LPISAISGTGTGELLDLV 351
+ ISA +G ++LDLV
Sbjct: 328 TMFISAKTGQRVNKILDLV 346
>gi|359411359|ref|ZP_09203824.1| GTP-binding protein engA [Clostridium sp. DL-VIII]
gi|357170243|gb|EHI98417.1| GTP-binding protein engA [Clostridium sp. DL-VIII]
Length = 438
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 81/195 (41%), Positives = 110/195 (56%), Gaps = 33/195 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNRL G +IV D PGVTRDR+Y + W + F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNRLAGKRISIVQDTPGVTRDRVYAEAEWLNYSFTMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P +D+ + + RQA AIE + VI+F+VDG+
Sbjct: 62 ----EPE-RDDIIV----------------------KQMRRQANIAIETADVIVFIVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT AD E+A LRK+ K ++L VNK +S ++ EF++LG P+ ISA G
Sbjct: 95 EGLTPADNEVAAMLRKS--KKPVVLVVNKVDSLKEE-DNAWEFYNLGIGDPVTISASQGL 151
Query: 343 GTGELLDLVCSELKK 357
G G++LD V + K
Sbjct: 152 GLGDMLDKVVENIDK 166
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 100/213 (46%), Gaps = 42/213 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R+A++G+PNVGKS+L N+L+G R IV D PG TRD + +F+L+DT G+
Sbjct: 178 RIAMIGKPNVGKSSLINKLLGEERVIVSDVPGTTRDAIDSYLETENGKFILIDTAGLRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK + I E ++ T AAIE + V I ++D
Sbjct: 238 SKVKEEI-ERYSVVRT--------------------------YAAIERADVCILMIDATE 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK----------CESPRKGIMQVSEFWSLGFSPL 334
G+T DE+I + + M K I++ VNK + +K + Q +F S L
Sbjct: 271 GITEQDEKIIGYAHE--MRKAIMVIVNKWDLVEKDDKTLDKFKKDLQQNLKFLSYA-EYL 327
Query: 335 PISAISGTGTGELLDLV--CSELKKVEVCIGFL 365
ISA++G G++LD+ C + + G L
Sbjct: 328 FISALTGQRVGKVLDIAKYCYDNYNKRISTGIL 360
>gi|385260943|ref|ZP_10039081.1| ribosome-associated GTPase EngA [Streptococcus sp. SK140]
gi|385190216|gb|EIF37665.1| ribosome-associated GTPase EngA [Streptococcus sp. SK140]
Length = 436
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 79/195 (40%), Positives = 108/195 (55%), Gaps = 34/195 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 2 VLPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGI 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+V A I+ QA A+EE+ VI+F+V
Sbjct: 62 DDVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE +A L K + K +ILAVNK ++P + +F++LG PLPIS++
Sbjct: 92 GKEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGEPLPISSVH 148
Query: 341 GTGTGELLDLVCSEL 355
G GTG++LD + L
Sbjct: 149 GIGTGDVLDAIVENL 163
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 30/155 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + + EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTHFTDADGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+ D+ IA + + K +I+ VNK ++ K
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGMIIVVNKWDTLEK 301
>gi|350270470|ref|YP_004881778.1| GTPase [Oscillibacter valericigenes Sjm18-20]
gi|348595312|dbj|BAK99272.1| GTPase [Oscillibacter valericigenes Sjm18-20]
Length = 441
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 107/193 (55%), Gaps = 33/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L+G +IV D PGVTRDR+YG + W F L+DTGG+
Sbjct: 3 PIVAIVGRPNVGKSMLFNKLIGRRLSIVEDTPGVTRDRIYGETDWNGRAFTLIDTGGIEP 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ Q + + + +QA AI+ + VIIFL D +
Sbjct: 63 RTDDQ-----------------------------ILTFMRQQAQLAIDHATVIIFLTDVK 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLTA+D E+A L ++ K I+LAVNK +S EF++LG P+ +SA+ G
Sbjct: 94 TGLTASDHEVAGMLLRS--GKPIVLAVNKMDSTGTVNPDFYEFYNLGLGDPIAVSAVHGH 151
Query: 343 GTGELLDLVCSEL 355
GTG+LLD C L
Sbjct: 152 GTGDLLD-ACVRL 163
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 103/217 (47%), Gaps = 38/217 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VA++G+PNVGKS+L NR++G R+IV D G TRD + + +F+ +DT G+
Sbjct: 178 KVALIGKPNVGKSSLLNRILGEERSIVSDVAGTTRDAIDSLFENKQGKFLFIDTAGMRKK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK +I + +V R AT AIE S V + L+DG+
Sbjct: 238 SKVDEDI-------------------EKYSVLR--------ATMAIERSDVCLILIDGRD 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----LGFSP----LP 335
G+T D ++A + K I+ VNK + K + + + LGF L
Sbjct: 271 GVTEQDTKVAGLAHE--AGKASIIVVNKWDLVDKDDKTMDKLTADIRRDLGFMTYAPVLF 328
Query: 336 ISAISGTGTGELLDLVCSELKKVEVCIGFLLICNAIT 372
ISA++G +L +L+ + + + I ++ N ++
Sbjct: 329 ISALTGQRVEKLFELIVAVSNQASLRITTGMLNNVLS 365
>gi|260662130|ref|ZP_05863026.1| ribosome-associated GTPase EngA [Lactobacillus fermentum 28-3-CHN]
gi|260553513|gb|EEX26405.1| ribosome-associated GTPase EngA [Lactobacillus fermentum 28-3-CHN]
Length = 437
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 108/193 (55%), Gaps = 34/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNR+ G AIV D PGVTRDR+Y W F ++DTGG
Sbjct: 4 PVVAIVGRPNVGKSTLFNRIAGERIAIVEDTPGVTRDRLYAHGEWLGKNFSMIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I M PL T+ I +QA AIEE+ VII +V+ +
Sbjct: 61 -----------------IEMSDQPLLTQ----------IRQQAEIAIEEADVIIMVVNVE 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE++A L ++ +K ++LAVNK ++P + + V +F+ LG P P+S++ G
Sbjct: 94 NGVTDADEQVAQILYRS--NKPVVLAVNKVDNPERR-LDVYDFYQLGLGEPYPVSSVHGV 150
Query: 343 GTGELLDLVCSEL 355
G G++LD V
Sbjct: 151 GLGDMLDAVIENF 163
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 80/168 (47%), Gaps = 33/168 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
R + +GRPNVGKS+L N ++G NR IV D G TRD + F + EF +VDT G+
Sbjct: 176 RFSFIGRPNVGKSSLVNAILGENRVIVSDMAGTTRDAI-NTQFTAKDGREFTMVDTAGIK 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T A+ R + AI+ S V++ +++
Sbjct: 235 KKGKLYEN-------------------TERYALMR--------SMRAIDNSDVVLVVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCES-PRKGIMQVSEFWSL 329
+ G+ D+ IA + + + +I+ VNK ++ P + +++F +L
Sbjct: 268 EEGIRELDKHIAGYAHE--AGRAVIIVVNKWDTIPDRDQRTMTDFTNL 313
>gi|262402852|ref|ZP_06079413.1| GTP-binding protein EngA [Vibrio sp. RC586]
gi|262351634|gb|EEZ00767.1| GTP-binding protein EngA [Vibrio sp. RC586]
Length = 494
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 110/192 (57%), Gaps = 40/192 (20%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YG++ GEHEF++VDTGG+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVVDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
S+ + +A +Q+ AAI+E+ V++F+VD
Sbjct: 61 ---DGSEEGVETKMA---------------------------QQSLAAIDEADVVLFMVD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSPL-PIS 337
G+AGLT ADE IA LR+ ++K IL VNK + GI +EFW LG + I+
Sbjct: 91 GRAGLTVADEAIAQHLRR--IEKPAILVVNKVD----GIDADAASAEFWQLGMDQMYQIA 144
Query: 338 AISGTGTGELLD 349
A G G G L+D
Sbjct: 145 AAHGRGVGALID 156
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 100/223 (44%), Gaps = 46/223 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS L NR++G R +V D PG TRD +Y E E++L+DT GV
Sbjct: 207 KLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMKRDEREYVLIDTAGVRRR 266
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + E ++ T+ AIE++ V++ +VD +
Sbjct: 267 KRINETV-EKFSVVKTL--------------------------QAIEDANVVLLVVDARE 299
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS------LGFSPLP--- 335
++ D + + + + I++AVNK + + V E LGF
Sbjct: 300 NISDQDLSLLGFALNS--GRSIVIAVNKWDGLS---IDVKEHVKKELDRRLGFVDFARIH 354
Query: 336 -ISAISGTGTGELLDLVCSELKKVEVCIGFLLICNAITKIFHI 377
ISA+ GTG G L + V + +G + +T+I +
Sbjct: 355 FISALHGTGVGHLFESVQEAYRSATTRVG----TSVLTRIMKM 393
>gi|365540816|ref|ZP_09365991.1| GTP-binding protein Der [Vibrio ordalii ATCC 33509]
Length = 495
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 82/198 (41%), Positives = 113/198 (57%), Gaps = 40/198 (20%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YG++ GEH+F+++DTGG+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHDFIVIDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
S+ + +A +Q+ AAI+E+ V++F+VD
Sbjct: 61 ---DGSEEGVETKMA---------------------------QQSLAAIDEADVVLFMVD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSPL-PIS 337
G+AGLTAADE IA LRK ++K IL VNK + GI +EFW LG + I+
Sbjct: 91 GRAGLTAADEMIAQHLRK--IEKRAILVVNKVD----GIDADAASAEFWQLGVDQMYQIA 144
Query: 338 AISGTGTGELLDLVCSEL 355
A G G G L+D + L
Sbjct: 145 AAHGRGVGILIDRALNPL 162
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 101/220 (45%), Gaps = 40/220 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS L NR++G R +V D PG TRD +Y E E++L+DT GV
Sbjct: 208 KLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMMRDEREYVLIDTAGVRRR 267
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
++ + E ++ T+ A+E++ V++ ++D +
Sbjct: 268 TRINETV-EKFSVVKTL--------------------------KAVEDANVVLLVIDARE 300
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF---WSLGFSPLP----IS 337
++ D + + + + I+LAVNK + + + + LGF IS
Sbjct: 301 NISDQDLSLLGFALNS--GRSIVLAVNKWDGLDNDVKERVKKELDRRLGFVDFARIHFIS 358
Query: 338 AISGTGTGELLDLVCSELKKVEVCIGFLLICNAITKIFHI 377
A+ GTG G L + V K +G + +T+I +
Sbjct: 359 ALHGTGVGHLFESVQEAYKSATTRVG----TSVLTRILKM 394
>gi|385812294|ref|YP_005848685.1| GTP-binding protein engA [Lactobacillus fermentum CECT 5716]
gi|299783191|gb|ADJ41189.1| GTP-binding protein engA [Lactobacillus fermentum CECT 5716]
Length = 370
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 108/193 (55%), Gaps = 34/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNR+ G AIV D PGVTRDR+Y W F ++DTGG
Sbjct: 4 PVVAIVGRPNVGKSTLFNRIAGERIAIVEDTPGVTRDRLYAHGEWLGKNFSMIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I M PL T+ I +QA AIEE+ VII +V+ +
Sbjct: 61 -----------------IEMSDQPLLTQ----------IRQQAEIAIEEADVIIMVVNVE 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE++A L ++ +K ++LAVNK ++P + + V +F+ LG P P+S++ G
Sbjct: 94 NGVTDADEQVAQILYRS--NKPVVLAVNKVDNPERR-LDVYDFYQLGLGEPYPVSSVHGV 150
Query: 343 GTGELLDLVCSEL 355
G G++LD V
Sbjct: 151 GLGDMLDAVIENF 163
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 33/168 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
R + +GRPNVGKS+L N ++G NR IV D G TRD + F + EF +VDT G+
Sbjct: 176 RFSFIGRPNVGKSSLVNAILGENRVIVSDMAGTTRDAI-NTQFTAKDGREFTMVDTAGIK 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T A+ R + AI++S V++ +++
Sbjct: 235 KKGKLYEN-------------------TERYALMR--------SMRAIDDSDVVLVVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCES-PRKGIMQVSEFWSL 329
+ G+ D+ IA + + + +I+ VNK ++ P + +++F +L
Sbjct: 268 EEGIRELDKHIAGYAHE--AGRAVIIVVNKWDTIPDRDQRTMTDFTNL 313
>gi|295091914|emb|CBK78021.1| ribosome-associated GTPase EngA [Clostridium cf. saccharolyticum
K10]
Length = 444
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 85/193 (44%), Positives = 110/193 (56%), Gaps = 32/193 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN L G +IV D PGVTRDR+Y W + F L+DTGG+
Sbjct: 6 PVVAVVGRPNVGKSTLFNVLAGEMISIVKDTPGVTRDRIYADCTWLDKAFTLIDTGGI-- 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P+ +R+ +A+M QA AI + VIIF+VD +
Sbjct: 64 ----EPD-------------------SRDIILAQM----REQAEIAIATADVIIFIVDVR 96
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT +D ++AD LRK+ K +ILAVNK +S K V EF++LG P+PISA S
Sbjct: 97 QGLTDSDSKVADMLRKS--RKPVILAVNKVDSFAKFGNDVYEFYNLGIGDPIPISAASRL 154
Query: 343 GTGELLDLVCSEL 355
G GELLD V +
Sbjct: 155 GLGELLDAVVAHF 167
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 38/197 (19%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
PR+AIVG+PNVGKS++ N+L+G NR IV + G TRD + E++ +DT G+
Sbjct: 180 PRIAIVGKPNVGKSSIVNKLLGENRVIVSNIAGTTRDAVDTEIVHNGTEYVFIDTAGL-- 237
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ + I E+L + I + A+E + V++ ++D
Sbjct: 238 --RRKNKIKEELERYSII-----------------------RTVTAVERADVVLVVIDAT 272
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----LGFSPLP--- 335
G+T D +IA K II+ VNK ++ K + E+ + L F P
Sbjct: 273 EGVTEQDAKIAGIAHDR--GKGIIIVVNKWDAIEKNDKTIYEYTNKIKTILSFVPYAEYV 330
Query: 336 -ISAISGTGTGELLDLV 351
+SA +G +L DL+
Sbjct: 331 FVSAQTGQRLNKLYDLI 347
>gi|184155357|ref|YP_001843697.1| GTP-binding protein EngA [Lactobacillus fermentum IFO 3956]
gi|238692974|sp|B2GC35.1|DER_LACF3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|183226701|dbj|BAG27217.1| GTP-binding protein [Lactobacillus fermentum IFO 3956]
Length = 437
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 108/193 (55%), Gaps = 34/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNR+ G AIV D PGVTRDR+Y W F ++DTGG
Sbjct: 4 PVVAIVGRPNVGKSTLFNRIAGERIAIVEDTPGVTRDRLYAHGEWLGKNFSMIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I M PL T+ I +QA AIEE+ VII +V+ +
Sbjct: 61 -----------------IEMSDQPLLTQ----------IRQQAEIAIEEADVIIMVVNVE 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE++A L ++ +K ++LAVNK ++P + + V +F+ LG P P+S++ G
Sbjct: 94 NGVTDADEQVAQILYRS--NKPVVLAVNKVDNPERR-LDVYDFYRLGLGEPYPVSSVHGV 150
Query: 343 GTGELLDLVCSEL 355
G G++LD V
Sbjct: 151 GLGDMLDAVIENF 163
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 33/168 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
R + +GRPNVGKS+L N ++G NR IV D G TRD + F + EF +VDT G+
Sbjct: 176 RFSFIGRPNVGKSSLVNAILGENRVIVSDMAGTTRDAI-NTQFTAKDGREFTMVDTAGIK 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T A+ R + AI++S V++ +++
Sbjct: 235 KKGKLYEN-------------------TERYALMR--------SMRAIDDSDVVLVVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCES-PRKGIMQVSEFWSL 329
+ G+ D+ IA + + + +I+ VNK ++ P + +++F +L
Sbjct: 268 EEGIRELDKHIAGYAHE--AGRAVIIVVNKWDTIPDRDQRTMTDFTNL 313
>gi|395240783|ref|ZP_10417807.1| GTPase Der [Lactobacillus gigeriorum CRBIP 24.85]
gi|394475565|emb|CCI87784.1| GTPase Der [Lactobacillus gigeriorum CRBIP 24.85]
Length = 435
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 108/192 (56%), Gaps = 34/192 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVG+PNVGKS LFNR++ AIV D PGVTRDR Y + W H+F ++DTGG+
Sbjct: 1 MLPTVAIVGQPNVGKSTLFNRIINERLAIVEDRPGVTRDRNYAPAEWLGHKFNIIDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
ED ++ I QA AI+E+ VIIFL +
Sbjct: 61 ---------TWED---------------------GKIEEEIRAQAEIAIDEADVIIFLTN 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
+G+T DE+IA L K K IILAVNK ++P + + + +F+SLG P+P+S
Sbjct: 91 VLSGITDLDEKIAQLLYKT--TKPIILAVNKADNPEQRV-NIYDFYSLGLGDPIPVSGSH 147
Query: 341 GTGTGELLDLVC 352
GTG G+LLD V
Sbjct: 148 GTGIGDLLDKVV 159
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 91/196 (46%), Gaps = 41/196 (20%)
Query: 167 AIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEH--EFMLVDTGGVLNV 224
+++GRPNVGKS++ N+L+G R IV + G TRD + F E +F L+DT G+
Sbjct: 177 SVIGRPNVGKSSIVNKLLGEQRVIVANMEGTTRDAI-DTPFTDEDGTKFRLIDTAGI--- 232
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E T + +V R A AIE S V++ ++D
Sbjct: 233 -RRRGKVYE---------------KTEKYSVMR--------ALGAIERSDVVLLVLDAST 268
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPLP- 335
G+ D+ +A + K +I+ VNK + P+K EF L ++P+
Sbjct: 269 GIREQDKHVAGYAHD--AGKGVIIVVNKWDLPKKDSNSAKDFEKVIRDEFQYLDYAPIIF 326
Query: 336 ISAISGTGTGELLDLV 351
+SA +G +L LV
Sbjct: 327 VSAETGQRINQLPQLV 342
>gi|387780574|ref|YP_005755372.1| putative GTPase [Staphylococcus aureus subsp. aureus LGA251]
gi|344177676|emb|CCC88154.1| putative GTPase [Staphylococcus aureus subsp. aureus LGA251]
Length = 436
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 105/193 (54%), Gaps = 34/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y W H+F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTIFNRIVGERVSIVEDTPGVTRDRIYSSGEWLTHDFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I QA AI+E+ VIIF+V+ +
Sbjct: 62 ----------------------------EIGDAPFQTQIRAQAEIAIDEADVIIFMVNVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT +DE +A L K+ K ++LAVNK ++ V +F+SLGF P PIS G
Sbjct: 94 EGLTQSDEMVAQILYKS--KKTVVLAVNKVDNMEMR-TDVYDFYSLGFGEPYPISGSHGL 150
Query: 343 GTGELLDLVCSEL 355
G G+LLD V S
Sbjct: 151 GLGDLLDAVVSHF 163
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 82/162 (50%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R++I+GRPNVGKS+L N ++G +R IV + G TRD + + +++L+DT G+
Sbjct: 177 RLSIIGRPNVGKSSLVNAILGEDRVIVSNVAGTTRDAIDTEYSYDGQDYVLIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ ++D +
Sbjct: 234 -RKKGKVYE---------------STEKYSVLR--------ALKAIERSNVVLVVIDAEQ 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ +A + + K +++ VNK ++ K + +F
Sbjct: 270 GIIEQDKRVAGYAHEQ--GKAVVIVVNKWDTVEKDSKTMKKF 309
>gi|452824931|gb|EME31931.1| GTP-binding protein [Galdieria sulphuraria]
Length = 541
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 86/229 (37%), Positives = 122/229 (53%), Gaps = 35/229 (15%)
Query: 124 YSSLLSRQLIIQDETDDRKDSGKKQKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRL 183
+S L+++Q +D+ + + +++ KT I LP VAIVGRPNVGKS L NRL
Sbjct: 54 FSQLVAKQNSTKDDLTSQTEEKTRKEIPKTRI---IRRNLPLVAIVGRPNVGKSTLLNRL 110
Query: 184 VGGNR--AIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTI 241
R AI VD PG+TRDR Y R+FW +F LVDTGG+ + ++
Sbjct: 111 TRDFRFGAIAVDVPGITRDRTYHRAFWNGIDFELVDTGGL---------VFDE------- 154
Query: 242 GMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNY 301
G E +P I QA A+ E+ IF+VD G+ D +IA +R+
Sbjct: 155 GREQVPFLKE----------IREQALIALNEATAAIFVVDSTVGVADLDRQIAKMIRR-- 202
Query: 302 MDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGTGELLD 349
+ ++LAVNKC+ ++ + +EFW LG P P+S I G GTG+LLD
Sbjct: 203 LGLPVLLAVNKCDDEQR-YLDANEFWKLGLGEPFPVSGIHGIGTGDLLD 250
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 68/138 (49%), Gaps = 27/138 (19%)
Query: 158 VPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVD 217
V E + R+AIVGRPN GKS++ NRLVG RAIV D PG TRD + E + L+D
Sbjct: 269 VDERNVRRIAIVGRPNAGKSSILNRLVGETRAIVSDIPGTTRDTIDTTIQRDEKIYCLMD 328
Query: 218 TGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVII 277
T G+ + ++E G E MI R A AI + ++I
Sbjct: 329 TAGI-----RRKKMVE-------YGTEFF--------------MINR-AFKAIRRADLVI 361
Query: 278 FLVDGQAGLTAADEEIAD 295
+VD A + DE++A+
Sbjct: 362 LVVDAVADIVEQDEKLAE 379
>gi|336124873|ref|YP_004566921.1| GTP-binding protein [Vibrio anguillarum 775]
gi|335342596|gb|AEH33879.1| GTP-binding protein [Vibrio anguillarum 775]
Length = 510
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 82/198 (41%), Positives = 113/198 (57%), Gaps = 40/198 (20%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YG++ GEH+F+++DTGG+
Sbjct: 16 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHDFIVIDTGGI 75
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
S+ + +A +Q+ AAI+E+ V++F+VD
Sbjct: 76 ---DGSEEGVETKMA---------------------------QQSLAAIDEADVVLFMVD 105
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSPL-PIS 337
G+AGLTAADE IA LRK ++K IL VNK + GI +EFW LG + I+
Sbjct: 106 GRAGLTAADEVIAQHLRK--IEKRAILVVNKVD----GIDADAASAEFWQLGVDQMYQIA 159
Query: 338 AISGTGTGELLDLVCSEL 355
A G G G L+D + L
Sbjct: 160 AAHGRGVGILIDRALNPL 177
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 100/220 (45%), Gaps = 40/220 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS L NR++G R +V D PG TRD +Y E E++L+DT GV
Sbjct: 223 KLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMMRDEREYVLIDTAGVRRR 282
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
++ + E ++ T+ A+E++ V++ ++D +
Sbjct: 283 TRINETV-EKFSVVKTL--------------------------KAVEDANVVLLVIDARE 315
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF---WSLGFSPLP----IS 337
++ D + + + I+LAVNK + + + + LGF IS
Sbjct: 316 NISDQDLSLLGFALN--AGRSIVLAVNKWDGLDNDVKERVKKELDRRLGFVDFARIHFIS 373
Query: 338 AISGTGTGELLDLVCSELKKVEVCIGFLLICNAITKIFHI 377
A+ GTG G L + V K +G + +T+I +
Sbjct: 374 ALHGTGVGHLFESVQEAYKSATTRVG----TSVLTRILKM 409
>gi|417936799|ref|ZP_12580105.1| ribosome-associated GTPase EngA [Streptococcus infantis X]
gi|421276376|ref|ZP_15727199.1| ribosome-associated GTPase EngA [Streptococcus mitis SPAR10]
gi|343399241|gb|EGV11763.1| ribosome-associated GTPase EngA [Streptococcus infantis X]
gi|395878329|gb|EJG89396.1| ribosome-associated GTPase EngA [Streptococcus mitis SPAR10]
Length = 436
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 107/194 (55%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K +ILAVNK ++P + +F++LG PLPIS++ G
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGEPLPISSVHG 149
Query: 342 TGTGELLDLVCSEL 355
GTG++LD + L
Sbjct: 150 IGTGDVLDAIVENL 163
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 30/155 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + + EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTHFTDADGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+ D+ IA + + K +I+ VNK ++ K
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGMIIVVNKWDTLEK 301
>gi|422746302|ref|ZP_16800235.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus MRSA131]
gi|320140353|gb|EFW32209.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus MRSA131]
Length = 436
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 105/193 (54%), Gaps = 34/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y W H+F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTIFNRIVGERVSIVEDTPGVTRDRIYSSGEWLTHDFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I QA AI+E+ VIIF+V+ +
Sbjct: 62 ----------------------------EIGDAPFQTQIRAQAEIAIDEAYVIIFMVNVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT +DE +A L K+ K ++LAVNK ++ V +F+SLGF P PIS G
Sbjct: 94 EGLTQSDEMVAQILYKS--KKPVVLAVNKVDNMEMR-TDVYDFYSLGFGEPYPISGSHGL 150
Query: 343 GTGELLDLVCSEL 355
G G+LLD V S
Sbjct: 151 GLGDLLDAVVSHF 163
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 82/162 (50%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R++I+GRPNVGKS+L N ++G +R IV + G TRD + + +++L+DT G+
Sbjct: 177 RLSIIGRPNVGKSSLVNAILGEDRVIVSNVAGTTRDAIDTEYSYDGQDYVLIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ ++D +
Sbjct: 234 -RKKGKVYE---------------STEKYSVLR--------ALKAIERSNVVLVVIDAEQ 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ +A + + K +++ VNK ++ K + +F
Sbjct: 270 GIIEQDKRVAGYAHEQ--GKAVVIVVNKWDTVEKDSKTMKKF 309
>gi|421837241|ref|ZP_16271487.1| GTP-binding protein Der, partial [Clostridium botulinum
CFSAN001627]
gi|409740670|gb|EKN40825.1| GTP-binding protein Der, partial [Clostridium botulinum
CFSAN001627]
Length = 204
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 83/194 (42%), Positives = 108/194 (55%), Gaps = 33/194 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L G AIV D PGVTRDR+Y + W ++F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAGKRIAIVQDTPGVTRDRIYAEAEWLNYKFTMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P ED+ + S + RQA AIE + VIIFLVDG+
Sbjct: 62 ----EPK-SEDIIV----------------------SQMRRQAQIAIEMANVIIFLVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL ADEE+A LRK+ K ++L VNK + K EF++LG P+ IS+
Sbjct: 95 EGLAPADEEVAQMLRKS--KKPVVLVVNKIDK-LKDENNAYEFYNLGIGDPVTISSSQAL 151
Query: 343 GTGELLDLVCSELK 356
G G++LD V K
Sbjct: 152 GLGDMLDRVVEYFK 165
>gi|309798864|ref|ZP_07693125.1| GTP-binding protein EngA [Streptococcus infantis SK1302]
gi|308117513|gb|EFO54928.1| GTP-binding protein EngA [Streptococcus infantis SK1302]
Length = 436
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 107/194 (55%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K +ILAVNK ++P + +F++LG PLPIS++ G
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGEPLPISSVHG 149
Query: 342 TGTGELLDLVCSEL 355
GTG++LD + L
Sbjct: 150 IGTGDVLDAIVENL 163
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 30/155 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + + EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTHFTDADGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+ D+ IA + + K +I+ VNK ++ K
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGMIIVVNKWDTLEK 301
>gi|392389910|ref|YP_006426513.1| ribosome-associated GTPase EngA [Ornithobacterium rhinotracheale
DSM 15997]
gi|390520988|gb|AFL96719.1| ribosome-associated GTPase EngA [Ornithobacterium rhinotracheale
DSM 15997]
Length = 436
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/191 (43%), Positives = 103/191 (53%), Gaps = 32/191 (16%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRL+ AIV GVTRDR YG+S W EF ++DTGG + S
Sbjct: 5 VAIVGRPNVGKSTLFNRLLQRREAIVDSVSGVTRDRHYGKSDWNGKEFTVIDTGGYIEGS 64
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
EG I +Q AIEE+ +I+F+VD Q G
Sbjct: 65 DD--------------AFEG---------------EIRKQVELAIEEASIIVFVVDNQIG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP-LPISAISGTGT 344
+T D+ +A L++ DK + LAVNK +S K IM EF+ LGF ISA SG GT
Sbjct: 96 VTDMDKRVALLLQQT-TDKPVFLAVNKVDS-NKNIMDAVEFYELGFEKYYTISAASGGGT 153
Query: 345 GELLDLVCSEL 355
G+LLD + L
Sbjct: 154 GDLLDAIVEAL 164
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 87/189 (46%), Gaps = 35/189 (18%)
Query: 159 PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDT 218
P LP++ I GRPNVGKS N L+G R IV D G TRD + EF+L+DT
Sbjct: 172 PFEGLPKITIAGRPNVGKSTFTNALLGEERNIVTDIAGTTRDSIETLYSKFGQEFVLIDT 231
Query: 219 GGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIF 278
G+ + + + EDL + + ++ AIE+ V+I
Sbjct: 232 AGM----RKKNKVEEDLEFYSVM-----------------------RSIRAIEDCDVVIL 264
Query: 279 LVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS------LGFS 332
++D + G+ + D +I + +KN K I++ VNK ++ K + E + F+
Sbjct: 265 MIDAERGIESQDMKIFNLAQKN--RKGILILVNKWDAVEKETNTMKEMEAAIKLRIAPFT 322
Query: 333 PLPISAISG 341
+PI IS
Sbjct: 323 DVPILFISA 331
>gi|377556030|ref|ZP_09785753.1| GTP-binding protein engA [Lactobacillus gastricus PS3]
gi|376168768|gb|EHS87496.1| GTP-binding protein engA [Lactobacillus gastricus PS3]
Length = 437
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 109/193 (56%), Gaps = 34/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNR+ G +IV D PGVTRDR+Y W EF ++DTGG
Sbjct: 4 PIVAIVGRPNVGKSTLFNRIAGERISIVEDTPGVTRDRIYAHGDWLGKEFSMIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I + PL T+ I QA AI+E+ VI+ +V+ +
Sbjct: 61 -----------------IEISDQPLTTQ----------IREQAEVAIDEADVIVMVVNVE 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE++A L +++ K ++LAVNK ++P + Q+ +F+SLG P P+S++ G
Sbjct: 94 NGVTDADEQVAKILYRSH--KPVVLAVNKVDNPERR-SQIFDFYSLGLGEPYPVSSVHGV 150
Query: 343 GTGELLDLVCSEL 355
G G+LLD V
Sbjct: 151 GIGDLLDEVIKHF 163
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 84/168 (50%), Gaps = 33/168 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
R + +GRPNVGKS++ N ++G +R IV D G TRD + +F HEF +VDT G+
Sbjct: 176 RFSFIGRPNVGKSSIVNAMLGEDRVIVSDIAGTTRDSI-DTNFKTPDGHEFTMVDTAGIK 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T A+ R + AI++S V+IF+++
Sbjct: 235 KKGKLYEN-------------------TERYALMR--------SMRAIDDSDVVIFVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCES-PRKGIMQVSEFWSL 329
+ G+ D+ +A + + K II+AVNK ++ P + +++F +L
Sbjct: 268 EEGIRELDKHVAGYAHE--AGKAIIIAVNKWDTIPDRDQRTMTDFTNL 313
>gi|325289812|ref|YP_004265993.1| GTP-binding protein engA [Syntrophobotulus glycolicus DSM 8271]
gi|324965213|gb|ADY55992.1| GTP-binding protein engA [Syntrophobotulus glycolicus DSM 8271]
Length = 443
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 108/193 (55%), Gaps = 31/193 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNR+VG AIV + PGVTRDR+Y + W F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTLFNRVVGRMIAIVENTPGVTRDRLYFEAQWLNRNFTLIDTGGIEF 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+S P + S++++QA A+EE+ V++F++DG+
Sbjct: 64 KDQSTP----------------------------LSSLMKQQAEIAVEEADVVVFVLDGK 95
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGT 342
T DE +A +LR + K ++L VNK E+ + ++ E+ LGF P+P+SA G
Sbjct: 96 TKATVEDEMVAKFLRSS--GKPVVLVVNKVENFKNYEVESYEYLELGFGEPIPVSAAHGM 153
Query: 343 GTGELLDLVCSEL 355
G++LD V L
Sbjct: 154 NIGDMLDKVVENL 166
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 93/196 (47%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++A++GRPNVGKS+L N++VG R IV D G TRD + + + +++L+DT G+
Sbjct: 180 KIAVIGRPNVGKSSLVNKMVGEERVIVSDIAGTTRDAIDTPFRFEDRDYVLIDTAGIRRR 239
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K I T +V R + AI+ + V++ ++D
Sbjct: 240 KK-------------------IAELTENYSVIR--------SFRAIDRADVVLMMLDAVE 272
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS--------LGFSPLP- 335
G+T D+ IA + + K IIL +NK + K ++ F + ++P
Sbjct: 273 GVTDQDKRIAGYAHE--AGKAIILVINKWDLIEKDDKTINRFERDIREELAFMAYAPTQF 330
Query: 336 ISAISGTGTGELLDLV 351
ISA +G ++++LV
Sbjct: 331 ISAKTGQRVHKIIELV 346
>gi|87161650|ref|YP_494061.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|161509642|ref|YP_001575301.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|294848438|ref|ZP_06789184.1| ribosome-associated GTPase EngA [Staphylococcus aureus A9754]
gi|415687446|ref|ZP_11451321.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
CGS01]
gi|418641890|ref|ZP_13204095.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-24]
gi|418646878|ref|ZP_13208969.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-88]
gi|418650574|ref|ZP_13212592.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-91]
gi|418659736|ref|ZP_13221395.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-111]
gi|419773578|ref|ZP_14299579.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CO-23]
gi|422743960|ref|ZP_16797938.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus MRSA177]
gi|123485886|sp|Q2FGW7.1|DER_STAA3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|189037166|sp|A8Z454.1|DER_STAAT RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|87127624|gb|ABD22138.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|160368451|gb|ABX29422.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|294824464|gb|EFG40887.1| ribosome-associated GTPase EngA [Staphylococcus aureus A9754]
gi|315197778|gb|EFU28112.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
CGS01]
gi|320142720|gb|EFW34523.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus MRSA177]
gi|375018345|gb|EHS11925.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-24]
gi|375027860|gb|EHS21218.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-91]
gi|375031896|gb|EHS25157.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-88]
gi|375034383|gb|EHS27547.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-111]
gi|383972638|gb|EID88669.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CO-23]
Length = 436
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 105/193 (54%), Gaps = 34/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y W H+F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTIFNRIVGERVSIVEDTPGVTRDRIYSSGEWLTHDFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I QA AI+E+ VIIF+V+ +
Sbjct: 62 ----------------------------EIGDAPFQTQIRAQAEIAIDEAYVIIFMVNVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT +DE +A L K+ K ++LAVNK ++ V +F+SLGF P PIS G
Sbjct: 94 EGLTQSDEMVAQILYKS--KKPVVLAVNKVDNMEMR-TDVYDFYSLGFGEPYPISGSHGL 150
Query: 343 GTGELLDLVCSEL 355
G G+LLD V S
Sbjct: 151 GLGDLLDAVVSHF 163
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 82/162 (50%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R++I+GRPNVGKS+L N ++G +R IV + G TRD + + +++L+DT G+
Sbjct: 177 RLSIIGRPNVGKSSLVNAILGEDRVIVSNVAGTTRDAIDTEYSYDGQDYVLIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ ++D +
Sbjct: 234 -RKKGKVYE---------------STEKYSVLR--------ALKAIERSNVVLVVIDAEQ 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ +A + + K +++ VNK ++ K + +F
Sbjct: 270 GIIEQDKRVAGYAHEQ--GKAVVIVVNKWDTVEKDSKTMKKF 309
>gi|417938620|ref|ZP_12581917.1| ribosome-associated GTPase EngA [Streptococcus infantis SK970]
gi|343391080|gb|EGV03656.1| ribosome-associated GTPase EngA [Streptococcus infantis SK970]
Length = 436
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 107/194 (55%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSTLFNRIAGERISIVEDIEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K +ILAVNK ++P + +F++LG PLPIS++ G
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGEPLPISSVHG 149
Query: 342 TGTGELLDLVCSEL 355
GTG++LD + L
Sbjct: 150 IGTGDVLDAIVENL 163
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 73/156 (46%), Gaps = 32/156 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
+ +++GRPNVGKS+L N ++G +R I G TRD + F E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAI-DTHFTDEDGQEFTMIDTAGMR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A AI+ S V++ +++
Sbjct: 235 KSGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
+ G+ D+ IA + + K +I+ VNK ++ K
Sbjct: 268 EEGIREYDKRIAGFAHE--AGKGMIIVVNKWDTLEK 301
>gi|258619961|ref|ZP_05715001.1| GTP-binding protein [Vibrio mimicus VM573]
gi|258627193|ref|ZP_05721981.1| GTP-binding protein [Vibrio mimicus VM603]
gi|262165075|ref|ZP_06032812.1| GTP-binding protein EngA [Vibrio mimicus VM223]
gi|262172166|ref|ZP_06039844.1| GTP-binding protein EngA [Vibrio mimicus MB-451]
gi|424808309|ref|ZP_18233711.1| GTP-binding protein [Vibrio mimicus SX-4]
gi|449146967|ref|ZP_21777718.1| GTP-binding protein EngA [Vibrio mimicus CAIM 602]
gi|258580495|gb|EEW05456.1| GTP-binding protein [Vibrio mimicus VM603]
gi|258587694|gb|EEW12403.1| GTP-binding protein [Vibrio mimicus VM573]
gi|261893242|gb|EEY39228.1| GTP-binding protein EngA [Vibrio mimicus MB-451]
gi|262024791|gb|EEY43459.1| GTP-binding protein EngA [Vibrio mimicus VM223]
gi|342324846|gb|EGU20627.1| GTP-binding protein [Vibrio mimicus SX-4]
gi|449077461|gb|EMB48444.1| GTP-binding protein EngA [Vibrio mimicus CAIM 602]
Length = 494
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 110/192 (57%), Gaps = 40/192 (20%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YG++ GEHEF+++DTGG+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
S+ + +A +Q+ AAI+E+ V++F+VD
Sbjct: 61 ---DGSEEGVETKMA---------------------------QQSLAAIDEADVVLFMVD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSPL-PIS 337
G+AGLT ADE IA LR+ ++K IL VNK + GI +EFW LG + I+
Sbjct: 91 GRAGLTVADEAIAQHLRR--IEKPAILVVNKVD----GIDADAASAEFWQLGMEQMYQIA 144
Query: 338 AISGTGTGELLD 349
A G G G L+D
Sbjct: 145 AAHGRGVGALID 156
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 100/220 (45%), Gaps = 40/220 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS L NR++G R +V D PG TRD +Y E E++L+DT GV
Sbjct: 207 KLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMKRDEREYVLIDTAGVRRR 266
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + E ++ T+ AIE++ V++ +VD +
Sbjct: 267 KRINETV-EKFSVVKTL--------------------------QAIEDANVVLLVVDARE 299
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF---WSLGFSPLP----IS 337
++ D + + + + I++AVNK + + + + LGF IS
Sbjct: 300 NISDQDLSLLGFALNS--GRSIVIAVNKWDGLNTDVKEHVKKELDRRLGFVDFARIHFIS 357
Query: 338 AISGTGTGELLDLVCSELKKVEVCIGFLLICNAITKIFHI 377
A+ GTG G L + V + +G + +T+I +
Sbjct: 358 ALHGTGVGHLFESVQEAYRSATTRVG----TSVLTRIMKM 393
>gi|153216257|ref|ZP_01950357.1| GTP-binding protein [Vibrio cholerae 1587]
gi|124114402|gb|EAY33222.1| GTP-binding protein [Vibrio cholerae 1587]
Length = 494
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 110/192 (57%), Gaps = 40/192 (20%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YG++ GEHEF+++DTGG+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
S+ + +A +Q+ AAI+E+ V++F+VD
Sbjct: 61 ---DGSEEGVETKMA---------------------------QQSLAAIDEADVVLFMVD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSPL-PIS 337
G+AGLT ADE IA LR+ ++K IL VNK + GI +EFW LG + I+
Sbjct: 91 GRAGLTVADEAIAQHLRR--IEKPAILVVNKVD----GIDADAASAEFWQLGMDQMYQIA 144
Query: 338 AISGTGTGELLD 349
A G G G L+D
Sbjct: 145 AAHGRGVGALID 156
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 100/223 (44%), Gaps = 46/223 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS L NR++G R +V D PG TRD +Y E E++L+DT GV
Sbjct: 207 KLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMKRDEREYVLIDTAGVRRR 266
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + E ++ T+ AIE++ V++ +VD +
Sbjct: 267 KRINETV-EKFSVVKTL--------------------------QAIEDANVVLLVVDARE 299
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS------LGFSPLP--- 335
++ D + + + + I++AVNK + + V E LGF
Sbjct: 300 NISDQDLSLLGFALNS--GRSIVIAVNKWDGLS---LDVKEHVKKELDRRLGFVDFARIH 354
Query: 336 -ISAISGTGTGELLDLVCSELKKVEVCIGFLLICNAITKIFHI 377
ISA+ GTG G L + V + +G + +T+I +
Sbjct: 355 FISALHGTGVGHLFESVQEAYRSATTRVG----TSVLTRIMKM 393
>gi|153800614|ref|ZP_01955200.1| GTP-binding protein [Vibrio cholerae MZO-3]
gi|153824529|ref|ZP_01977196.1| GTP-binding protein [Vibrio cholerae MZO-2]
gi|229513098|ref|ZP_04402564.1| GTP-binding protein EngA [Vibrio cholerae TMA 21]
gi|229523415|ref|ZP_04412822.1| GTP-binding protein EngA [Vibrio cholerae TM 11079-80]
gi|229525408|ref|ZP_04414813.1| GTP-binding protein EngA [Vibrio cholerae bv. albensis VL426]
gi|229530107|ref|ZP_04419497.1| GTP-binding protein EngA [Vibrio cholerae 12129(1)]
gi|254225026|ref|ZP_04918640.1| GTP-binding protein [Vibrio cholerae V51]
gi|384423994|ref|YP_005633352.1| GTP-binding protein EngA [Vibrio cholerae LMA3984-4]
gi|417820186|ref|ZP_12466800.1| GTPase Der [Vibrio cholerae HE39]
gi|417823876|ref|ZP_12470467.1| GTPase Der [Vibrio cholerae HE48]
gi|419829375|ref|ZP_14352861.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-1A2]
gi|419832345|ref|ZP_14355807.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-61A2]
gi|419835675|ref|ZP_14359119.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-46B1]
gi|421342416|ref|ZP_15792822.1| GTPase Der [Vibrio cholerae HC-43B1]
gi|421353561|ref|ZP_15803893.1| GTPase Der [Vibrio cholerae HE-45]
gi|422916546|ref|ZP_16950882.1| GTPase Der [Vibrio cholerae HC-02A1]
gi|423734038|ref|ZP_17707252.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-41B1]
gi|423818064|ref|ZP_17715485.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-55C2]
gi|423850023|ref|ZP_17719274.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-59A1]
gi|423879146|ref|ZP_17722879.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-60A1]
gi|423950229|ref|ZP_17733669.1| ribosome-associated GTPase EngA [Vibrio cholerae HE-40]
gi|423977925|ref|ZP_17737217.1| ribosome-associated GTPase EngA [Vibrio cholerae HE-46]
gi|423996968|ref|ZP_17740229.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-02C1]
gi|424008322|ref|ZP_17751271.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-44C1]
gi|424015672|ref|ZP_17755517.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-55B2]
gi|424018611|ref|ZP_17758409.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-59B1]
gi|424624152|ref|ZP_18062627.1| GTPase Der [Vibrio cholerae HC-50A1]
gi|424628648|ref|ZP_18066951.1| GTPase Der [Vibrio cholerae HC-51A1]
gi|424632682|ref|ZP_18070796.1| GTPase Der [Vibrio cholerae HC-52A1]
gi|424635771|ref|ZP_18073790.1| GTPase Der [Vibrio cholerae HC-55A1]
gi|424639686|ref|ZP_18077580.1| GTPase Der [Vibrio cholerae HC-56A1]
gi|424647748|ref|ZP_18085422.1| GTPase Der [Vibrio cholerae HC-57A1]
gi|429884988|ref|ZP_19366593.1| GTP-binding protein EngA [Vibrio cholerae PS15]
gi|443526534|ref|ZP_21092613.1| GTPase Der [Vibrio cholerae HC-78A1]
gi|124123903|gb|EAY42646.1| GTP-binding protein [Vibrio cholerae MZO-3]
gi|125622413|gb|EAZ50733.1| GTP-binding protein [Vibrio cholerae V51]
gi|149741747|gb|EDM55776.1| GTP-binding protein [Vibrio cholerae MZO-2]
gi|229333881|gb|EEN99367.1| GTP-binding protein EngA [Vibrio cholerae 12129(1)]
gi|229338989|gb|EEO04006.1| GTP-binding protein EngA [Vibrio cholerae bv. albensis VL426]
gi|229339778|gb|EEO04793.1| GTP-binding protein EngA [Vibrio cholerae TM 11079-80]
gi|229349991|gb|EEO14945.1| GTP-binding protein EngA [Vibrio cholerae TMA 21]
gi|327483547|gb|AEA77954.1| GTP-binding protein EngA [Vibrio cholerae LMA3984-4]
gi|340037817|gb|EGQ98791.1| GTPase Der [Vibrio cholerae HE39]
gi|340047561|gb|EGR08484.1| GTPase Der [Vibrio cholerae HE48]
gi|341640023|gb|EGS64626.1| GTPase Der [Vibrio cholerae HC-02A1]
gi|395945167|gb|EJH55837.1| GTPase Der [Vibrio cholerae HC-43B1]
gi|395952686|gb|EJH63299.1| GTPase Der [Vibrio cholerae HE-45]
gi|408015213|gb|EKG52807.1| GTPase Der [Vibrio cholerae HC-50A1]
gi|408020594|gb|EKG57890.1| GTPase Der [Vibrio cholerae HC-52A1]
gi|408026442|gb|EKG63449.1| GTPase Der [Vibrio cholerae HC-56A1]
gi|408026856|gb|EKG63850.1| GTPase Der [Vibrio cholerae HC-55A1]
gi|408036329|gb|EKG72767.1| GTPase Der [Vibrio cholerae HC-57A1]
gi|408058514|gb|EKG93310.1| GTPase Der [Vibrio cholerae HC-51A1]
gi|408620960|gb|EKK93963.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-1A2]
gi|408631484|gb|EKL04024.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-41B1]
gi|408636377|gb|EKL08525.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-55C2]
gi|408643366|gb|EKL15091.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-60A1]
gi|408644490|gb|EKL16174.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-59A1]
gi|408650989|gb|EKL22245.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-61A2]
gi|408661092|gb|EKL32085.1| ribosome-associated GTPase EngA [Vibrio cholerae HE-40]
gi|408665937|gb|EKL36743.1| ribosome-associated GTPase EngA [Vibrio cholerae HE-46]
gi|408854021|gb|EKL93791.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-02C1]
gi|408858429|gb|EKL98103.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-46B1]
gi|408861708|gb|EKM01281.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-55B2]
gi|408865762|gb|EKM05154.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-44C1]
gi|408869617|gb|EKM08911.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-59B1]
gi|429228320|gb|EKY34248.1| GTP-binding protein EngA [Vibrio cholerae PS15]
gi|443455097|gb|ELT18885.1| GTPase Der [Vibrio cholerae HC-78A1]
Length = 494
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 110/192 (57%), Gaps = 40/192 (20%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YG++ GEHEF+++DTGG+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
S+ + +A +Q+ AAI+E+ V++F+VD
Sbjct: 61 ---DGSEEGVETKMA---------------------------QQSLAAIDEADVVLFMVD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSPL-PIS 337
G+AGLT ADE IA LR+ ++K IL VNK + GI +EFW LG + I+
Sbjct: 91 GRAGLTVADEAIAQHLRR--IEKPAILVVNKVD----GIDADAASAEFWQLGMDQMYQIA 144
Query: 338 AISGTGTGELLD 349
A G G G L+D
Sbjct: 145 AAHGRGVGALID 156
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 100/223 (44%), Gaps = 46/223 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS L NR++G R +V D PG TRD +Y E E++L+DT GV
Sbjct: 207 KLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMKRDEREYVLIDTAGVRRR 266
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + E ++ T+ AIE++ V++ +VD +
Sbjct: 267 KRINETV-EKFSVVKTL--------------------------QAIEDANVVLLVVDARE 299
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS------LGFSPLP--- 335
++ D + + + + I++AVNK + + V E LGF
Sbjct: 300 NISDQDLSLLGFALNS--GRSIVIAVNKWDGLS---LDVKEHVKKELDRRLGFVDFARIH 354
Query: 336 -ISAISGTGTGELLDLVCSELKKVEVCIGFLLICNAITKIFHI 377
ISA+ GTG G L + V + +G + +T+I +
Sbjct: 355 FISALHGTGVGHLFESVQEAYRSATTRVG----TSVLTRIMKM 393
>gi|331269697|ref|YP_004396189.1| small GTP-binding protein [Clostridium botulinum BKT015925]
gi|329126247|gb|AEB76192.1| small GTP-binding protein [Clostridium botulinum BKT015925]
Length = 438
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/196 (41%), Positives = 112/196 (57%), Gaps = 33/196 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L G AIV D PGVTRDR+Y ++ W ++F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAGKRIAIVDDMPGVTRDRIYAQAEWLNNKFTIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P + + VA+M RQA AIE + V++F+VDG+
Sbjct: 62 ----EPE-------------------SEDVIVAQM----RRQAQMAIEMADVVLFIVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL AD E+A LRK +K I+LAVNK + + + EF++LG P+ IS+ G
Sbjct: 95 QGLADADREVAQMLRK--ANKSIVLAVNKIDRHQLD-DNIYEFYNLGLGDPMAISSSQGL 151
Query: 343 GTGELLDLVCSELKKV 358
G G+LLD V + V
Sbjct: 152 GLGDLLDEVVDKFPSV 167
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 94/200 (47%), Gaps = 38/200 (19%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
E+ R+A+VGRPNVGKS+L NR++G + IV + PG TRD + E +F L+DT
Sbjct: 173 ENEYIRIAMVGRPNVGKSSLINRILGEEKHIVSNIPGTTRDSVDSYIEREEGKFALIDTA 232
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G+ SK + + A+ T A+IE + V I +
Sbjct: 233 GLRRKSKIKEQVERYSAVRT---------------------------IASIENADVCILM 265
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF-----WSLGFSP- 333
+D + G+ DE+I + + ++K I++ VNK + K + F + L F P
Sbjct: 266 LDAEQGIAEQDEKIIGYAHE--LNKAIMVIVNKWDLIEKDDKTMKNFKDKLRYELSFLPY 323
Query: 334 ---LPISAISGTGTGELLDL 350
L ISA +G ++L +
Sbjct: 324 ASFLFISAKTGQRVNKVLGM 343
>gi|323491635|ref|ZP_08096814.1| GTP-binding protein Der [Vibrio brasiliensis LMG 20546]
gi|323314211|gb|EGA67296.1| GTP-binding protein Der [Vibrio brasiliensis LMG 20546]
Length = 494
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/196 (42%), Positives = 113/196 (57%), Gaps = 40/196 (20%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YG++ GEHEF+++DTGG+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+G T E +M +Q+ AAI+E+ V++F+VD
Sbjct: 61 ----------------------DG----TEEGVETKMA----QQSLAAIDEADVVLFMVD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSPL-PIS 337
G+AGLTAADE IA LRK ++K +L VNK + GI +EFW LG + I+
Sbjct: 91 GRAGLTAADEAIASHLRK--IEKPSMLVVNKVD----GIDADAASAEFWQLGVENMYQIA 144
Query: 338 AISGTGTGELLDLVCS 353
A G G L+DL +
Sbjct: 145 AAHGRGVTALIDLALN 160
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 100/220 (45%), Gaps = 40/220 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS L NR++G R +V D PG TRD +Y E++L+DT GV
Sbjct: 207 KLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRRR 266
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
++ + E ++ T+ A+E++ V++ ++D +
Sbjct: 267 TRINETV-EKFSVVKTL--------------------------KAVEDANVVMLVIDARE 299
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIM-QVSEFWS--LGFSPLP----IS 337
++ D + + + I++AVNK + + QV + LGF IS
Sbjct: 300 NISDQDLSLLGFALN--AGRSIVIAVNKWDGLDMDVKEQVKKELDRRLGFVDFARIHFIS 357
Query: 338 AISGTGTGELLDLVCSELKKVEVCIGFLLICNAITKIFHI 377
A+ GTG G L + V K +G + +T+I +
Sbjct: 358 ALHGTGVGHLFESVQEAYKSATTRVG----TSVLTRIMKM 393
>gi|153828302|ref|ZP_01980969.1| GTP-binding protein [Vibrio cholerae 623-39]
gi|254285481|ref|ZP_04960445.1| GTP-binding protein [Vibrio cholerae AM-19226]
gi|421350586|ref|ZP_15800951.1| GTPase Der [Vibrio cholerae HE-25]
gi|422306253|ref|ZP_16393435.1| ribosome-associated GTPase EngA [Vibrio cholerae CP1035(8)]
gi|422909271|ref|ZP_16943920.1| GTPase Der [Vibrio cholerae HE-09]
gi|424658624|ref|ZP_18095880.1| GTPase Der [Vibrio cholerae HE-16]
gi|148876256|gb|EDL74391.1| GTP-binding protein [Vibrio cholerae 623-39]
gi|150424343|gb|EDN16280.1| GTP-binding protein [Vibrio cholerae AM-19226]
gi|341635418|gb|EGS60134.1| GTPase Der [Vibrio cholerae HE-09]
gi|395951031|gb|EJH61645.1| GTPase Der [Vibrio cholerae HE-25]
gi|408054532|gb|EKG89502.1| GTPase Der [Vibrio cholerae HE-16]
gi|408626937|gb|EKK99766.1| ribosome-associated GTPase EngA [Vibrio cholerae CP1035(8)]
Length = 494
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 110/192 (57%), Gaps = 40/192 (20%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YG++ GEHEF+++DTGG+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
S+ + +A +Q+ AAI+E+ V++F+VD
Sbjct: 61 ---DGSEEGVETKMA---------------------------QQSLAAIDEADVVLFMVD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSPL-PIS 337
G+AGLT ADE IA LR+ ++K IL VNK + GI +EFW LG + I+
Sbjct: 91 GRAGLTVADEAIAQHLRR--IEKPAILVVNKVD----GIDADAASAEFWQLGMDQMYQIA 144
Query: 338 AISGTGTGELLD 349
A G G G L+D
Sbjct: 145 AAHGRGVGALID 156
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 100/220 (45%), Gaps = 40/220 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS L NR++G R +V D PG TRD +Y E E++L+DT GV
Sbjct: 207 KLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMKRDEREYVLIDTAGVRRR 266
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + E ++ T+ AIE++ V++ +VD +
Sbjct: 267 KRINETV-EKFSVVKTL--------------------------QAIEDANVVLLVVDARE 299
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPR---KGIMQVSEFWSLGFSPLP----IS 337
++ D + + + + I++AVNK + K ++ LGF IS
Sbjct: 300 NISDQDLSLLGFALNS--GRSIVIAVNKWDGLSFDVKEHVKKELDRRLGFVDFARIHFIS 357
Query: 338 AISGTGTGELLDLVCSELKKVEVCIGFLLICNAITKIFHI 377
A+ GTG G L + V + +G + +T+I +
Sbjct: 358 ALHGTGVGHLFESVQEAYRSATTRVG----TSVLTRIMKM 393
>gi|262192496|ref|ZP_06050647.1| GTP-binding protein EngA [Vibrio cholerae CT 5369-93]
gi|422921984|ref|ZP_16955186.1| GTPase Der [Vibrio cholerae BJG-01]
gi|262031655|gb|EEY50242.1| GTP-binding protein EngA [Vibrio cholerae CT 5369-93]
gi|341647349|gb|EGS71432.1| GTPase Der [Vibrio cholerae BJG-01]
Length = 494
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 110/192 (57%), Gaps = 40/192 (20%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YG++ GEHEF+++DTGG+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
S+ + +A +Q+ AAI+E+ V++F+VD
Sbjct: 61 ---DGSEEGVETKMA---------------------------QQSLAAIDEADVVLFMVD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSPL-PIS 337
G+AGLT ADE IA LR+ ++K IL VNK + GI +EFW LG + I+
Sbjct: 91 GRAGLTVADEAIAQHLRR--IEKPAILVVNKVD----GIDADAASAEFWQLGMDQMYQIA 144
Query: 338 AISGTGTGELLD 349
A G G G L+D
Sbjct: 145 AAHGRGVGTLID 156
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 100/223 (44%), Gaps = 46/223 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS L NR++G R +V D PG TRD +Y E E++L+DT GV
Sbjct: 207 KLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMKRDEREYVLIDTAGVRRR 266
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + E ++ T+ AIE++ V++ +VD +
Sbjct: 267 KRINETV-EKFSVVKTL--------------------------QAIEDANVVLLVVDARE 299
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS------LGFSPLP--- 335
++ D + + + + I++AVNK + + V E LGF
Sbjct: 300 NISDQDLSLLGFALNS--GRSIVIAVNKWDGLS---LDVKEHVKKELDRRLGFVDFARIH 354
Query: 336 -ISAISGTGTGELLDLVCSELKKVEVCIGFLLICNAITKIFHI 377
ISA+ GTG G L + V + +G + +T+I +
Sbjct: 355 FISALHGTGVGHLFESVQEAYRSATTRVG----TSVLTRIMKM 393
>gi|297581162|ref|ZP_06943086.1| GTP-binding protein [Vibrio cholerae RC385]
gi|297534478|gb|EFH73315.1| GTP-binding protein [Vibrio cholerae RC385]
Length = 494
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 110/192 (57%), Gaps = 40/192 (20%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YG++ GEHEF+++DTGG+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
S+ + +A +Q+ AAI+E+ V++F+VD
Sbjct: 61 ---DGSEEGVETKMA---------------------------QQSLAAIDEADVVLFMVD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSPL-PIS 337
G+AGLT ADE IA LR+ ++K IL VNK + GI +EFW LG + I+
Sbjct: 91 GRAGLTVADEAIAQHLRR--IEKPAILVVNKVD----GIDADAASAEFWQLGMDQMYQIA 144
Query: 338 AISGTGTGELLD 349
A G G G L+D
Sbjct: 145 AAHGRGVGALID 156
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 100/223 (44%), Gaps = 46/223 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS L NR++G R +V D PG TRD +Y E E++L+DT GV
Sbjct: 207 KLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMKRDEREYVLIDTAGVRRR 266
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + E ++ T+ AIE++ V++ +VD +
Sbjct: 267 KRINETV-EKFSVVKTL--------------------------QAIEDANVVLLVVDARE 299
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS------LGFSPLP--- 335
++ D + + + + I++AVNK + + V E LGF
Sbjct: 300 NISDQDLSLLGFALNS--GRSIVIAVNKWDGLS---LDVKEHVKKELDRRLGFVDFARIH 354
Query: 336 -ISAISGTGTGELLDLVCSELKKVEVCIGFLLICNAITKIFHI 377
ISA+ GTG G L + V + +G + +T+I +
Sbjct: 355 FISALHGTGVGHLFESVQEAYRSATTRVG----TSVLTRIMKM 393
>gi|335030110|ref|ZP_08523607.1| ribosome-associated GTPase EngA [Streptococcus infantis SK1076]
gi|334267206|gb|EGL85672.1| ribosome-associated GTPase EngA [Streptococcus infantis SK1076]
Length = 436
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 107/194 (55%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSTLFNRIAGERISIVEDIEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K +ILAVNK ++P + +F++LG PLPIS++ G
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGEPLPISSVHG 149
Query: 342 TGTGELLDLVCSEL 355
GTG++LD + L
Sbjct: 150 IGTGDVLDAIVENL 163
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 73/155 (47%), Gaps = 30/155 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + + EF+++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTHFTDADGQEFIMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 YGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+ D+ IA + + K +I+ VNK ++ K
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGMIIVVNKWDTLEK 301
>gi|419778654|ref|ZP_14304541.1| ribosome-associated GTPase EngA [Streptococcus oralis SK10]
gi|383187076|gb|EIC79535.1| ribosome-associated GTPase EngA [Streptococcus oralis SK10]
Length = 436
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/196 (41%), Positives = 108/196 (55%), Gaps = 38/196 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAI 339
+ G+T ADE +A L K + K +ILAVNK ++P R I +F++LG PLPIS++
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMRNDIF---DFYALGLGEPLPISSV 147
Query: 340 SGTGTGELLDLVCSEL 355
G GTG++LD + L
Sbjct: 148 HGIGTGDVLDAIVENL 163
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 30/155 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + + EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTHFTDADGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+ D+ IA + + K +I+ VNK ++ K
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGMIIVVNKWDTLEK 301
>gi|444406402|ref|ZP_21203154.1| ribosome biogenesis GTPase Der, partial [Streptococcus pneumoniae
PNI0009]
gi|444268277|gb|ELU74149.1| ribosome biogenesis GTPase Der, partial [Streptococcus pneumoniae
PNI0009]
Length = 405
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 107/194 (55%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K +ILAVNK ++P + +F++LG PLPIS++ G
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGEPLPISSVHG 149
Query: 342 TGTGELLDLVCSEL 355
GTG++LD + L
Sbjct: 150 IGTGDVLDAIVENL 163
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 30/155 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGR-SFWGEHEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + + EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTHFTDTDGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVINAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+ D+ IA + + K +I+ VNK ++ K
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGMIIVVNKWDTLEK 301
>gi|365134322|ref|ZP_09343201.1| ribosome-associated GTPase EngA [Subdoligranulum sp. 4_3_54A2FAA]
gi|363614283|gb|EHL65780.1| ribosome-associated GTPase EngA [Subdoligranulum sp. 4_3_54A2FAA]
Length = 441
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 113/193 (58%), Gaps = 32/193 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+LVG AIV D PGVTRDR+YG W +H F+L+DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLVGQRLAIVEDTPGVTRDRLYGNCEWQDHRFLLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P +D+ + G QA AI+ + I+F+ D +
Sbjct: 62 ----EPK-ADDVLLRHMRG----------------------QAQLAIDTADAILFVTDIR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGT 342
+G+TA D++IA L ++ K + L VNK + + M++ +F+SLG L P+S++ G
Sbjct: 95 SGVTAQDQDIAAMLMRS--GKPVFLVVNKVDGVGEPPMELYDFYSLGIGELYPVSSVHGH 152
Query: 343 GTGELLDLVCSEL 355
GTG+LL+ VC+ L
Sbjct: 153 GTGDLLEAVCACL 165
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 42/197 (21%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VA++GRPNVGKS+L N ++G R IV +E G TRD + +F +DT G+
Sbjct: 180 VAVIGRPNVGKSSLVNHILGEERMIVANEAGTTRDAVDSDVDNQYGKFTFIDTAGLRKRG 239
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
K E V R + ++ AA+E + V + ++D G
Sbjct: 240 KV------------------------EDGVERYSVL---RSLAAVERAKVCVIMIDATEG 272
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCES----------PRKGIMQVSEFWSLGFSPLP 335
T D ++A + + K I+AVNK ++ RK +M ++F + ++P+
Sbjct: 273 FTEQDSKVAGFAHEQ--GKACIIAVNKWDAVEKDDKTMDVQRKKLM--NDFSFMSYAPII 328
Query: 336 -ISAISGTGTGELLDLV 351
ISA +G L +L+
Sbjct: 329 FISAKTGQRVDRLFELI 345
>gi|331265908|ref|YP_004325538.1| phosphoglycerate dehydrogenase, GTP-binding protein [Streptococcus
oralis Uo5]
gi|326682580|emb|CBZ00197.1| phosphoglycerate dehydrogenase, GTP-binding protein [Streptococcus
oralis Uo5]
Length = 436
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/196 (41%), Positives = 108/196 (55%), Gaps = 38/196 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAI 339
+ G+T ADE +A L K + K +ILAVNK ++P R I +F++LG PLPIS++
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMRNDIF---DFYALGLGEPLPISSV 147
Query: 340 SGTGTGELLDLVCSEL 355
G GTG++LD + L
Sbjct: 148 HGIGTGDVLDAIVENL 163
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 30/155 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGR-SFWGEHEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + + EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTHFTDTDGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+ D+ IA + + K +I+ VNK ++ K
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGMIIVVNKWDTLEK 301
>gi|291546330|emb|CBL19438.1| ribosome-associated GTPase EngA [Ruminococcus sp. SR1/5]
Length = 441
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 110/193 (56%), Gaps = 32/193 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN L G N +IV D PGVTRDR+Y W + F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTLFNALAGDNISIVKDTPGVTRDRIYADVTWLDRTFTLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P+ + + ++RM QA AI+ + VIIF+ D +
Sbjct: 62 ----EPD-------------------SSDIILSRM----REQAQIAIDTADVIIFITDVR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL +D ++AD LR++ K + L VNK +S +K +M V EF++LG P+PISA +
Sbjct: 95 QGLVDSDAKVADMLRRS--GKPVRLVVNKVDSHQKYMMDVYEFYNLGIGEPIPISAANRQ 152
Query: 343 GTGELLDLVCSEL 355
G G++LD V E
Sbjct: 153 GLGDMLDEVIKEF 165
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 29/156 (18%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
+P++AIVG+PNVGKS+L N+L+G R IV + G TRD + + W + +++ +DT G+
Sbjct: 177 IPKIAIVGKPNVGKSSLINKLLGEERVIVSNIAGTTRDAIDTKVTWNKKDYIFIDTAGLR 236
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K + I E ++ T+ A+E + V++ ++D
Sbjct: 237 RKGKVKEEI-ERYSVIRTV--------------------------TAVERADVVVVVIDA 269
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+T D +IA K II+AVNK ++ K
Sbjct: 270 SEGVTEQDAKIAGIAHDR--GKGIIVAVNKWDAIEK 303
>gi|15901543|ref|NP_346147.1| GTP-binding protein EngA [Streptococcus pneumoniae TIGR4]
gi|15903596|ref|NP_359146.1| GTP-binding protein EngA [Streptococcus pneumoniae R6]
gi|111657418|ref|ZP_01408170.1| hypothetical protein SpneT_02001366 [Streptococcus pneumoniae
TIGR4]
gi|116515879|ref|YP_816974.1| GTP-binding protein EngA [Streptococcus pneumoniae D39]
gi|148989364|ref|ZP_01820732.1| phosphoglycerate dehydrogenase-related protein [Streptococcus
pneumoniae SP6-BS73]
gi|148997762|ref|ZP_01825326.1| phosphoglycerate dehydrogenase-related protein [Streptococcus
pneumoniae SP11-BS70]
gi|149011426|ref|ZP_01832673.1| phosphoglycerate dehydrogenase-related protein [Streptococcus
pneumoniae SP19-BS75]
gi|149020788|ref|ZP_01835317.1| phosphoglycerate dehydrogenase-related protein [Streptococcus
pneumoniae SP23-BS72]
gi|168487543|ref|ZP_02712051.1| GTP-binding protein EngA [Streptococcus pneumoniae CDC1087-00]
gi|168491409|ref|ZP_02715552.1| GTP-binding protein EngA [Streptococcus pneumoniae CDC0288-04]
gi|168493616|ref|ZP_02717759.1| GTP-binding protein EngA [Streptococcus pneumoniae CDC3059-06]
gi|168575101|ref|ZP_02721064.1| GTP-binding protein EngA [Streptococcus pneumoniae MLV-016]
gi|169832823|ref|YP_001695085.1| GTP-binding protein EngA [Streptococcus pneumoniae Hungary19A-6]
gi|182684651|ref|YP_001836398.1| GTP-binding protein EngA [Streptococcus pneumoniae CGSP14]
gi|194398265|ref|YP_002038320.1| GTP-binding protein EngA [Streptococcus pneumoniae G54]
gi|221232445|ref|YP_002511598.1| GTP-binding protein EngA [Streptococcus pneumoniae ATCC 700669]
gi|225855139|ref|YP_002736651.1| GTP-binding protein EngA [Streptococcus pneumoniae JJA]
gi|225857322|ref|YP_002738833.1| GTP-binding protein EngA [Streptococcus pneumoniae P1031]
gi|225859462|ref|YP_002740972.1| GTP-binding protein EngA [Streptococcus pneumoniae 70585]
gi|225861533|ref|YP_002743042.1| GTP-binding protein EngA [Streptococcus pneumoniae Taiwan19F-14]
gi|237649250|ref|ZP_04523502.1| GTP-binding protein EngA [Streptococcus pneumoniae CCRI 1974]
gi|237822010|ref|ZP_04597855.1| GTP-binding protein EngA [Streptococcus pneumoniae CCRI 1974M2]
gi|289167434|ref|YP_003445703.1| phosphoglycerate dehydrogenase-related protein, GTP-binding protein
[Streptococcus mitis B6]
gi|298229308|ref|ZP_06962989.1| GTP-binding protein EngA [Streptococcus pneumoniae str. Canada
MDR_19F]
gi|298255748|ref|ZP_06979334.1| GTP-binding protein EngA [Streptococcus pneumoniae str. Canada
MDR_19A]
gi|298503453|ref|YP_003725393.1| GTP-binding protein EngA [Streptococcus pneumoniae TCH8431/19A]
gi|303254319|ref|ZP_07340427.1| GTP-binding protein EngA [Streptococcus pneumoniae BS455]
gi|303258643|ref|ZP_07344623.1| GTP-binding protein EngA [Streptococcus pneumoniae SP-BS293]
gi|303261806|ref|ZP_07347752.1| GTP-binding protein EngA [Streptococcus pneumoniae SP14-BS292]
gi|303263670|ref|ZP_07349592.1| GTP-binding protein EngA [Streptococcus pneumoniae BS397]
gi|303266846|ref|ZP_07352725.1| GTP-binding protein EngA [Streptococcus pneumoniae BS457]
gi|303269910|ref|ZP_07355651.1| GTP-binding protein EngA [Streptococcus pneumoniae BS458]
gi|307068334|ref|YP_003877300.1| putative GTPase [Streptococcus pneumoniae AP200]
gi|307705427|ref|ZP_07642284.1| small GTP-binding domain protein [Streptococcus mitis SK597]
gi|307707485|ref|ZP_07643967.1| GTP-binding protein EngA [Streptococcus mitis NCTC 12261]
gi|307709642|ref|ZP_07646094.1| small GTP-binding domain protein [Streptococcus mitis SK564]
gi|322377454|ref|ZP_08051945.1| ribosome-associated GTPase EngA [Streptococcus sp. M334]
gi|383938336|ref|ZP_09991550.1| ribosome-associated GTPase EngA [Streptococcus pseudopneumoniae
SK674]
gi|385262860|ref|ZP_10040958.1| ribosome-associated GTPase EngA [Streptococcus sp. SK643]
gi|387626900|ref|YP_006063076.1| GTP-binding protein EngA [Streptococcus pneumoniae INV104]
gi|387759820|ref|YP_006066798.1| GTP-binding protein EngA [Streptococcus pneumoniae INV200]
gi|387788751|ref|YP_006253819.1| GTP-binding protein EngA [Streptococcus pneumoniae ST556]
gi|415700172|ref|ZP_11457886.1| small GTP-binding domain protein [Streptococcus pneumoniae 459-5]
gi|415750096|ref|ZP_11478040.1| small GTP-binding domain protein [Streptococcus pneumoniae SV35]
gi|415752909|ref|ZP_11479891.1| small GTP-binding domain protein [Streptococcus pneumoniae SV36]
gi|417313186|ref|ZP_12099898.1| GTP-binding protein engA [Streptococcus pneumoniae GA04375]
gi|417687157|ref|ZP_12336431.1| GTP-binding protein engA [Streptococcus pneumoniae GA41301]
gi|417696869|ref|ZP_12346047.1| GTP-binding protein engA [Streptococcus pneumoniae GA47368]
gi|417699088|ref|ZP_12348259.1| GTP-binding protein engA [Streptococcus pneumoniae GA41317]
gi|417846559|ref|ZP_12492552.1| ribosome-associated GTPase EngA [Streptococcus mitis SK1073]
gi|417923806|ref|ZP_12567263.1| ribosome-associated GTPase EngA [Streptococcus mitis SK569]
gi|418074534|ref|ZP_12711785.1| GTP-binding protein engA [Streptococcus pneumoniae GA11184]
gi|418076925|ref|ZP_12714158.1| GTPase Der [Streptococcus pneumoniae GA47502]
gi|418079132|ref|ZP_12716354.1| GTPase Der [Streptococcus pneumoniae 4027-06]
gi|418081330|ref|ZP_12718540.1| GTPase Der [Streptococcus pneumoniae 6735-05]
gi|418083513|ref|ZP_12720710.1| GTPase Der [Streptococcus pneumoniae GA44288]
gi|418085701|ref|ZP_12722880.1| GTPase Der [Streptococcus pneumoniae GA47281]
gi|418087381|ref|ZP_12724550.1| GTPase Der [Streptococcus pneumoniae GA47033]
gi|418090066|ref|ZP_12727220.1| GTPase Der [Streptococcus pneumoniae GA43265]
gi|418092311|ref|ZP_12729451.1| GTPase Der [Streptococcus pneumoniae GA44452]
gi|418094499|ref|ZP_12731626.1| GTPase Der [Streptococcus pneumoniae GA49138]
gi|418099031|ref|ZP_12736128.1| GTPase Der [Streptococcus pneumoniae 6901-05]
gi|418101167|ref|ZP_12738250.1| GTPase Der [Streptococcus pneumoniae 7286-06]
gi|418103398|ref|ZP_12740470.1| GTPase Der [Streptococcus pneumoniae NP070]
gi|418105811|ref|ZP_12742867.1| GTPase Der [Streptococcus pneumoniae GA44500]
gi|418108138|ref|ZP_12745175.1| GTPase Der [Streptococcus pneumoniae GA41410]
gi|418110675|ref|ZP_12747694.1| GTPase Der [Streptococcus pneumoniae GA49447]
gi|418115224|ref|ZP_12752210.1| GTPase Der [Streptococcus pneumoniae 5787-06]
gi|418117383|ref|ZP_12754352.1| GTPase Der [Streptococcus pneumoniae 6963-05]
gi|418119157|ref|ZP_12756114.1| GTPase Der [Streptococcus pneumoniae GA18523]
gi|418121764|ref|ZP_12758707.1| GTPase Der [Streptococcus pneumoniae GA44194]
gi|418124033|ref|ZP_12760964.1| GTPase Der [Streptococcus pneumoniae GA44378]
gi|418128577|ref|ZP_12765470.1| GTPase Der [Streptococcus pneumoniae NP170]
gi|418130856|ref|ZP_12767739.1| GTPase Der [Streptococcus pneumoniae GA07643]
gi|418134645|ref|ZP_12771502.1| GTPase Der [Streptococcus pneumoniae GA11426]
gi|418137773|ref|ZP_12774611.1| GTP-binding protein engA [Streptococcus pneumoniae GA11663]
gi|418140033|ref|ZP_12776858.1| GTPase Der [Streptococcus pneumoniae GA13338]
gi|418142223|ref|ZP_12779035.1| GTP-binding protein engA [Streptococcus pneumoniae GA13455]
gi|418144658|ref|ZP_12781453.1| GTP-binding protein engA [Streptococcus pneumoniae GA13494]
gi|418146948|ref|ZP_12783726.1| GTP-binding protein engA [Streptococcus pneumoniae GA13637]
gi|418149065|ref|ZP_12785827.1| GTP-binding protein engA [Streptococcus pneumoniae GA13856]
gi|418151216|ref|ZP_12787962.1| GTP-binding protein engA [Streptococcus pneumoniae GA14798]
gi|418153449|ref|ZP_12790187.1| GTP-binding protein engA [Streptococcus pneumoniae GA16121]
gi|418158007|ref|ZP_12794723.1| GTP-binding protein engA [Streptococcus pneumoniae GA16833]
gi|418160413|ref|ZP_12797112.1| GTP-binding protein engA [Streptococcus pneumoniae GA17227]
gi|418165003|ref|ZP_12801671.1| GTP-binding protein engA [Streptococcus pneumoniae GA17371]
gi|418167308|ref|ZP_12803963.1| GTP-binding protein engA [Streptococcus pneumoniae GA17971]
gi|418169808|ref|ZP_12806449.1| GTP-binding protein engA [Streptococcus pneumoniae GA19077]
gi|418171844|ref|ZP_12808468.1| GTP-binding protein engA [Streptococcus pneumoniae GA19451]
gi|418174099|ref|ZP_12810711.1| GTP-binding protein engA [Streptococcus pneumoniae GA41277]
gi|418178754|ref|ZP_12815337.1| GTP-binding protein engA [Streptococcus pneumoniae GA41565]
gi|418181063|ref|ZP_12817632.1| GTP-binding protein engA [Streptococcus pneumoniae GA41688]
gi|418183246|ref|ZP_12819803.1| GTP-binding protein engA [Streptococcus pneumoniae GA43380]
gi|418185464|ref|ZP_12822005.1| GTP-binding protein engA [Streptococcus pneumoniae GA47283]
gi|418187687|ref|ZP_12824210.1| GTPase Der [Streptococcus pneumoniae GA47360]
gi|418189944|ref|ZP_12826456.1| GTPase Der [Streptococcus pneumoniae GA47373]
gi|418194275|ref|ZP_12830764.1| GTPase Der [Streptococcus pneumoniae GA47439]
gi|418196365|ref|ZP_12832841.1| GTP-binding protein engA [Streptococcus pneumoniae GA47688]
gi|418198534|ref|ZP_12834992.1| GTP-binding protein engA [Streptococcus pneumoniae GA47778]
gi|418200530|ref|ZP_12836973.1| GTPase Der [Streptococcus pneumoniae GA47976]
gi|418202916|ref|ZP_12839345.1| GTP-binding protein engA [Streptococcus pneumoniae GA52306]
gi|418217152|ref|ZP_12843832.1| GTP-binding protein engA [Streptococcus pneumoniae
Netherlands15B-37]
gi|418221739|ref|ZP_12848392.1| GTPase Der [Streptococcus pneumoniae GA47751]
gi|418223908|ref|ZP_12850548.1| GTPase Der [Streptococcus pneumoniae 5185-06]
gi|418228214|ref|ZP_12854831.1| GTPase Der [Streptococcus pneumoniae 3063-00]
gi|418230481|ref|ZP_12857080.1| GTPase Der [Streptococcus pneumoniae EU-NP01]
gi|418967964|ref|ZP_13519594.1| ribosome-associated GTPase EngA [Streptococcus mitis SK616]
gi|418972679|ref|ZP_13520758.1| ribosome-associated GTPase EngA [Streptococcus pseudopneumoniae
ATCC BAA-960]
gi|418977978|ref|ZP_13525784.1| ribosome-associated GTPase EngA [Streptococcus mitis SK575]
gi|419423693|ref|ZP_13963906.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA43264]
gi|419425649|ref|ZP_13965845.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae 7533-05]
gi|419427761|ref|ZP_13967942.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae 5652-06]
gi|419429907|ref|ZP_13970071.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA11856]
gi|419432082|ref|ZP_13972215.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae EU-NP05]
gi|419433985|ref|ZP_13974103.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA40183]
gi|419436504|ref|ZP_13976591.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae 8190-05]
gi|419438747|ref|ZP_13978815.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA13499]
gi|419440893|ref|ZP_13980938.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA40410]
gi|419443208|ref|ZP_13983234.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA13224]
gi|419445212|ref|ZP_13985227.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA19923]
gi|419447366|ref|ZP_13987371.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae 7879-04]
gi|419449492|ref|ZP_13989488.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae 4075-00]
gi|419450912|ref|ZP_13990898.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae EU-NP02]
gi|419453631|ref|ZP_13993601.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae EU-NP03]
gi|419456058|ref|ZP_13996015.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae EU-NP04]
gi|419458298|ref|ZP_13998240.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA02254]
gi|419464869|ref|ZP_14004760.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA04175]
gi|419469508|ref|ZP_14009376.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA06083]
gi|419471594|ref|ZP_14011453.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA07914]
gi|419473762|ref|ZP_14013611.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA13430]
gi|419476037|ref|ZP_14015873.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA14688]
gi|419478348|ref|ZP_14018171.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA18068]
gi|419482745|ref|ZP_14022532.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA40563]
gi|419487184|ref|ZP_14026946.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA44128]
gi|419489334|ref|ZP_14029083.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA44386]
gi|419491607|ref|ZP_14031345.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA47179]
gi|419495892|ref|ZP_14035609.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA47461]
gi|419498075|ref|ZP_14037782.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA47522]
gi|419502360|ref|ZP_14042044.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA47628]
gi|419504441|ref|ZP_14044109.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA47760]
gi|419506589|ref|ZP_14046250.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA49194]
gi|419510971|ref|ZP_14050612.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae NP141]
gi|419515213|ref|ZP_14054838.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae
England14-9]
gi|419519418|ref|ZP_14059024.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA08825]
gi|419521638|ref|ZP_14061233.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA05245]
gi|419523980|ref|ZP_14063555.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA13723]
gi|419528047|ref|ZP_14067590.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA17719]
gi|419530851|ref|ZP_14070377.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA40028]
gi|419532906|ref|ZP_14072421.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA47794]
gi|419535168|ref|ZP_14074667.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA17457]
gi|421207142|ref|ZP_15664194.1| small GTP-binding domain protein [Streptococcus pneumoniae 2090008]
gi|421209474|ref|ZP_15666487.1| small GTP-binding domain protein [Streptococcus pneumoniae 2070005]
gi|421211576|ref|ZP_15668558.1| small GTP-binding domain protein [Streptococcus pneumoniae 2070035]
gi|421213646|ref|ZP_15670600.1| small GTP-binding domain protein [Streptococcus pneumoniae 2070108]
gi|421215805|ref|ZP_15672726.1| small GTP-binding domain protein [Streptococcus pneumoniae 2070109]
gi|421218348|ref|ZP_15675242.1| small GTP-binding domain protein [Streptococcus pneumoniae 2070335]
gi|421225542|ref|ZP_15682280.1| small GTP-binding domain protein [Streptococcus pneumoniae 2070768]
gi|421230321|ref|ZP_15686985.1| small GTP-binding domain protein [Streptococcus pneumoniae 2061376]
gi|421232411|ref|ZP_15689052.1| small GTP-binding domain protein [Streptococcus pneumoniae 2080076]
gi|421234596|ref|ZP_15691214.1| small GTP-binding domain protein [Streptococcus pneumoniae 2061617]
gi|421236796|ref|ZP_15693393.1| small GTP-binding domain protein [Streptococcus pneumoniae 2071004]
gi|421239036|ref|ZP_15695600.1| small GTP-binding domain protein [Streptococcus pneumoniae 2071247]
gi|421241170|ref|ZP_15697715.1| small GTP-binding domain protein [Streptococcus pneumoniae 2080913]
gi|421243641|ref|ZP_15700153.1| small GTP-binding domain protein [Streptococcus pneumoniae 2081074]
gi|421245545|ref|ZP_15702043.1| small GTP-binding domain protein [Streptococcus pneumoniae 2081685]
gi|421247978|ref|ZP_15704456.1| small GTP-binding domain protein [Streptococcus pneumoniae 2082170]
gi|421249937|ref|ZP_15706394.1| small GTP-binding domain protein [Streptococcus pneumoniae 2082239]
gi|421266703|ref|ZP_15717583.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae SPAR27]
gi|421268868|ref|ZP_15719737.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae SPAR95]
gi|421271120|ref|ZP_15721974.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae SPAR48]
gi|421273362|ref|ZP_15724202.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae SPAR55]
gi|421275420|ref|ZP_15726249.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA52612]
gi|421281696|ref|ZP_15732493.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA04672]
gi|421285759|ref|ZP_15736535.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA60190]
gi|421287974|ref|ZP_15738737.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA58771]
gi|421292579|ref|ZP_15743313.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA56348]
gi|421296541|ref|ZP_15747250.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA58581]
gi|421302824|ref|ZP_15753488.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA17484]
gi|421307902|ref|ZP_15758544.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA60132]
gi|421310110|ref|ZP_15760735.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA62681]
gi|421312517|ref|ZP_15763119.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA58981]
gi|421314582|ref|ZP_15765169.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA47562]
gi|444382342|ref|ZP_21180545.1| ribosome biogenesis GTPase Der [Streptococcus pneumoniae PCS8106]
gi|444385579|ref|ZP_21183651.1| ribosome biogenesis GTPase Der [Streptococcus pneumoniae PCS8203]
gi|444409898|ref|ZP_21206477.1| ribosome biogenesis GTPase Der [Streptococcus pneumoniae PNI0076]
gi|444412854|ref|ZP_21209173.1| ribosome biogenesis GTPase Der [Streptococcus pneumoniae PNI0153]
gi|444422725|ref|ZP_21218370.1| ribosome biogenesis GTPase Der [Streptococcus pneumoniae PNI0446]
gi|54037053|sp|P64063.1|DER_STRR6 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|54040976|sp|P64062.1|DER_STRPN RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|122278180|sp|Q04J64.1|DER_STRP2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|238688353|sp|B1I766.1|DER_STRPI RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|238690849|sp|B5E756.1|DER_STRP4 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|238691183|sp|B2IRW4.1|DER_STRPS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|254783168|sp|C1C8U6.1|DER_STRP7 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|254783169|sp|B8ZMH4.1|DER_STRPJ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|254783171|sp|C1CFT0.1|DER_STRZJ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|254783172|sp|C1CM45.1|DER_STRZP RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|254783173|sp|C1CSX0.1|DER_STRZT RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|14973204|gb|AAK75787.1| phosphoglycerate dehydrogenase-related protein [Streptococcus
pneumoniae TIGR4]
gi|15459218|gb|AAL00357.1| Phosphoglycerate dehydrogenase [Streptococcus pneumoniae R6]
gi|116076455|gb|ABJ54175.1| phosphoglycerate dehydrogenase-related protein [Streptococcus
pneumoniae D39]
gi|147756261|gb|EDK63303.1| phosphoglycerate dehydrogenase-related protein [Streptococcus
pneumoniae SP11-BS70]
gi|147764416|gb|EDK71347.1| phosphoglycerate dehydrogenase-related protein [Streptococcus
pneumoniae SP19-BS75]
gi|147925114|gb|EDK76194.1| phosphoglycerate dehydrogenase-related protein [Streptococcus
pneumoniae SP6-BS73]
gi|147930429|gb|EDK81412.1| phosphoglycerate dehydrogenase-related protein [Streptococcus
pneumoniae SP23-BS72]
gi|168995325|gb|ACA35937.1| GTP-binding protein EngA [Streptococcus pneumoniae Hungary19A-6]
gi|182629985|gb|ACB90933.1| GTP-binding protein EngA [Streptococcus pneumoniae CGSP14]
gi|183569654|gb|EDT90182.1| GTP-binding protein EngA [Streptococcus pneumoniae CDC1087-00]
gi|183574158|gb|EDT94686.1| GTP-binding protein EngA [Streptococcus pneumoniae CDC0288-04]
gi|183576280|gb|EDT96808.1| GTP-binding protein EngA [Streptococcus pneumoniae CDC3059-06]
gi|183578800|gb|EDT99328.1| GTP-binding protein EngA [Streptococcus pneumoniae MLV-016]
gi|194357932|gb|ACF56380.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae G54]
gi|220674906|emb|CAR69481.1| GTP-binding protein EngA [Streptococcus pneumoniae ATCC 700669]
gi|225721482|gb|ACO17336.1| GTP-binding protein EngA [Streptococcus pneumoniae 70585]
gi|225723540|gb|ACO19393.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae JJA]
gi|225724777|gb|ACO20629.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae P1031]
gi|225727275|gb|ACO23126.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae
Taiwan19F-14]
gi|288907001|emb|CBJ21835.1| phosphoglycerate dehydrogenase-related protein, GTP-binding protein
[Streptococcus mitis B6]
gi|298239048|gb|ADI70179.1| GTP-binding protein EngA [Streptococcus pneumoniae TCH8431/19A]
gi|301794686|emb|CBW37137.1| GTP-binding protein EngA [Streptococcus pneumoniae INV104]
gi|301802409|emb|CBW35163.1| GTP-binding protein EngA [Streptococcus pneumoniae INV200]
gi|302598670|gb|EFL65708.1| GTP-binding protein EngA [Streptococcus pneumoniae BS455]
gi|302636889|gb|EFL67378.1| GTP-binding protein EngA [Streptococcus pneumoniae SP14-BS292]
gi|302640144|gb|EFL70599.1| GTP-binding protein EngA [Streptococcus pneumoniae SP-BS293]
gi|302640564|gb|EFL70970.1| GTP-binding protein EngA [Streptococcus pneumoniae BS458]
gi|302643614|gb|EFL73882.1| GTP-binding protein EngA [Streptococcus pneumoniae BS457]
gi|302646708|gb|EFL76933.1| GTP-binding protein EngA [Streptococcus pneumoniae BS397]
gi|306409871|gb|ADM85298.1| Predicted GTPase [Streptococcus pneumoniae AP200]
gi|307616437|gb|EFN95628.1| GTP-binding protein EngA [Streptococcus mitis NCTC 12261]
gi|307619540|gb|EFN98664.1| small GTP-binding domain protein [Streptococcus mitis SK564]
gi|307621026|gb|EFO00106.1| small GTP-binding domain protein [Streptococcus mitis SK597]
gi|321281654|gb|EFX58663.1| ribosome-associated GTPase EngA [Streptococcus sp. M334]
gi|327389894|gb|EGE88239.1| GTP-binding protein engA [Streptococcus pneumoniae GA04375]
gi|332074047|gb|EGI84525.1| GTP-binding protein engA [Streptococcus pneumoniae GA41301]
gi|332199734|gb|EGJ13809.1| GTP-binding protein engA [Streptococcus pneumoniae GA41317]
gi|332200267|gb|EGJ14340.1| GTP-binding protein engA [Streptococcus pneumoniae GA47368]
gi|339458192|gb|EGP70735.1| ribosome-associated GTPase EngA [Streptococcus mitis SK1073]
gi|342836688|gb|EGU70899.1| ribosome-associated GTPase EngA [Streptococcus mitis SK569]
gi|353746659|gb|EHD27319.1| GTPase Der [Streptococcus pneumoniae 4027-06]
gi|353747065|gb|EHD27723.1| GTPase Der [Streptococcus pneumoniae GA47502]
gi|353747135|gb|EHD27792.1| GTP-binding protein engA [Streptococcus pneumoniae GA11184]
gi|353752069|gb|EHD32700.1| GTPase Der [Streptococcus pneumoniae 6735-05]
gi|353754733|gb|EHD35345.1| GTPase Der [Streptococcus pneumoniae GA44288]
gi|353756410|gb|EHD37011.1| GTPase Der [Streptococcus pneumoniae GA47281]
gi|353758397|gb|EHD38989.1| GTPase Der [Streptococcus pneumoniae GA47033]
gi|353761257|gb|EHD41829.1| GTPase Der [Streptococcus pneumoniae GA43265]
gi|353763011|gb|EHD43568.1| GTPase Der [Streptococcus pneumoniae GA44452]
gi|353764995|gb|EHD45543.1| GTPase Der [Streptococcus pneumoniae GA49138]
gi|353769013|gb|EHD49535.1| GTPase Der [Streptococcus pneumoniae 6901-05]
gi|353770667|gb|EHD51179.1| GTPase Der [Streptococcus pneumoniae 7286-06]
gi|353774699|gb|EHD55186.1| GTPase Der [Streptococcus pneumoniae NP070]
gi|353775987|gb|EHD56466.1| GTPase Der [Streptococcus pneumoniae GA44500]
gi|353778415|gb|EHD58883.1| GTPase Der [Streptococcus pneumoniae GA41410]
gi|353781296|gb|EHD61741.1| GTPase Der [Streptococcus pneumoniae GA49447]
gi|353785308|gb|EHD65727.1| GTPase Der [Streptococcus pneumoniae 5787-06]
gi|353788064|gb|EHD68462.1| GTPase Der [Streptococcus pneumoniae 6963-05]
gi|353791109|gb|EHD71490.1| GTPase Der [Streptococcus pneumoniae GA18523]
gi|353792600|gb|EHD72972.1| GTPase Der [Streptococcus pneumoniae GA44194]
gi|353795853|gb|EHD76199.1| GTPase Der [Streptococcus pneumoniae GA44378]
gi|353799076|gb|EHD79399.1| GTPase Der [Streptococcus pneumoniae NP170]
gi|353802180|gb|EHD82480.1| GTPase Der [Streptococcus pneumoniae GA07643]
gi|353804456|gb|EHD84737.1| GTP-binding protein engA [Streptococcus pneumoniae GA13455]
gi|353807124|gb|EHD87396.1| GTP-binding protein engA [Streptococcus pneumoniae GA13494]
gi|353811401|gb|EHD91643.1| GTP-binding protein engA [Streptococcus pneumoniae GA13856]
gi|353812523|gb|EHD92758.1| GTP-binding protein engA [Streptococcus pneumoniae GA13637]
gi|353814426|gb|EHD94652.1| GTP-binding protein engA [Streptococcus pneumoniae GA14798]
gi|353817000|gb|EHD97208.1| GTP-binding protein engA [Streptococcus pneumoniae GA16121]
gi|353822146|gb|EHE02322.1| GTP-binding protein engA [Streptococcus pneumoniae GA17227]
gi|353824455|gb|EHE04629.1| GTP-binding protein engA [Streptococcus pneumoniae GA16833]
gi|353828835|gb|EHE08971.1| GTP-binding protein engA [Streptococcus pneumoniae GA17371]
gi|353829300|gb|EHE09434.1| GTP-binding protein engA [Streptococcus pneumoniae GA17971]
gi|353833787|gb|EHE13895.1| GTP-binding protein engA [Streptococcus pneumoniae GA19077]
gi|353835581|gb|EHE15675.1| GTP-binding protein engA [Streptococcus pneumoniae GA19451]
gi|353838055|gb|EHE18136.1| GTP-binding protein engA [Streptococcus pneumoniae GA41277]
gi|353842813|gb|EHE22859.1| GTP-binding protein engA [Streptococcus pneumoniae GA41565]
gi|353843135|gb|EHE23180.1| GTP-binding protein engA [Streptococcus pneumoniae GA41688]
gi|353847675|gb|EHE27695.1| GTP-binding protein engA [Streptococcus pneumoniae GA43380]
gi|353848748|gb|EHE28760.1| GTP-binding protein engA [Streptococcus pneumoniae GA47283]
gi|353849672|gb|EHE29677.1| GTPase Der [Streptococcus pneumoniae GA47360]
gi|353853671|gb|EHE33652.1| GTPase Der [Streptococcus pneumoniae GA47373]
gi|353857853|gb|EHE37815.1| GTPase Der [Streptococcus pneumoniae GA47439]
gi|353860376|gb|EHE40321.1| GTP-binding protein engA [Streptococcus pneumoniae GA47688]
gi|353861644|gb|EHE41579.1| GTP-binding protein engA [Streptococcus pneumoniae GA47778]
gi|353864071|gb|EHE43989.1| GTPase Der [Streptococcus pneumoniae GA47976]
gi|353867473|gb|EHE47368.1| GTP-binding protein engA [Streptococcus pneumoniae GA52306]
gi|353870425|gb|EHE50298.1| GTP-binding protein engA [Streptococcus pneumoniae
Netherlands15B-37]
gi|353875049|gb|EHE54903.1| GTPase Der [Streptococcus pneumoniae GA47751]
gi|353878706|gb|EHE58536.1| GTPase Der [Streptococcus pneumoniae 5185-06]
gi|353880609|gb|EHE60424.1| GTPase Der [Streptococcus pneumoniae 3063-00]
gi|353885362|gb|EHE65151.1| GTPase Der [Streptococcus pneumoniae EU-NP01]
gi|353900728|gb|EHE76279.1| GTP-binding protein engA [Streptococcus pneumoniae GA11663]
gi|353901882|gb|EHE77412.1| GTPase Der [Streptococcus pneumoniae GA11426]
gi|353904812|gb|EHE80262.1| GTPase Der [Streptococcus pneumoniae GA13338]
gi|379138493|gb|AFC95284.1| GTP-binding protein EngA [Streptococcus pneumoniae ST556]
gi|379529962|gb|EHY95203.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA02254]
gi|379536469|gb|EHZ01655.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA04175]
gi|379537154|gb|EHZ02339.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA13499]
gi|379538938|gb|EHZ04118.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA05245]
gi|379544312|gb|EHZ09457.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA06083]
gi|379546310|gb|EHZ11449.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA07914]
gi|379550085|gb|EHZ15187.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA11856]
gi|379550673|gb|EHZ15770.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA13224]
gi|379550926|gb|EHZ16022.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA13430]
gi|379556388|gb|EHZ21443.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA13723]
gi|379558819|gb|EHZ23851.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA14688]
gi|379563329|gb|EHZ28333.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA17457]
gi|379564860|gb|EHZ29855.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA18068]
gi|379566200|gb|EHZ31191.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA17719]
gi|379571260|gb|EHZ36218.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA40028]
gi|379572905|gb|EHZ37862.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA19923]
gi|379576986|gb|EHZ41910.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA40183]
gi|379577963|gb|EHZ42880.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA40410]
gi|379579337|gb|EHZ44244.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA40563]
gi|379585553|gb|EHZ50409.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA44128]
gi|379586265|gb|EHZ51119.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA43264]
gi|379586876|gb|EHZ51726.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA44386]
gi|379592969|gb|EHZ57784.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA47179]
gi|379593978|gb|EHZ58789.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA47461]
gi|379598908|gb|EHZ63693.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA47522]
gi|379600573|gb|EHZ65354.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA47628]
gi|379605426|gb|EHZ70177.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA47794]
gi|379605829|gb|EHZ70579.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA47760]
gi|379608503|gb|EHZ73249.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA49194]
gi|379612943|gb|EHZ77658.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae 8190-05]
gi|379614906|gb|EHZ79616.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae 7879-04]
gi|379617954|gb|EHZ82634.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae 5652-06]
gi|379619110|gb|EHZ83784.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae 7533-05]
gi|379622110|gb|EHZ86746.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae 4075-00]
gi|379622617|gb|EHZ87251.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae EU-NP02]
gi|379625701|gb|EHZ90327.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae EU-NP03]
gi|379628034|gb|EHZ92640.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae EU-NP04]
gi|379629163|gb|EHZ93764.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae EU-NP05]
gi|379631574|gb|EHZ96151.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae NP141]
gi|379635762|gb|EIA00321.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae
England14-9]
gi|379641255|gb|EIA05793.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA08825]
gi|381308556|gb|EIC49399.1| small GTP-binding domain protein [Streptococcus pneumoniae SV36]
gi|381314868|gb|EIC55634.1| small GTP-binding domain protein [Streptococcus pneumoniae 459-5]
gi|381318390|gb|EIC59115.1| small GTP-binding domain protein [Streptococcus pneumoniae SV35]
gi|383341677|gb|EID19930.1| ribosome-associated GTPase EngA [Streptococcus mitis SK616]
gi|383348794|gb|EID26748.1| ribosome-associated GTPase EngA [Streptococcus mitis SK575]
gi|383351515|gb|EID29308.1| ribosome-associated GTPase EngA [Streptococcus pseudopneumoniae
ATCC BAA-960]
gi|383714829|gb|EID70821.1| ribosome-associated GTPase EngA [Streptococcus pseudopneumoniae
SK674]
gi|385189355|gb|EIF36820.1| ribosome-associated GTPase EngA [Streptococcus sp. SK643]
gi|395572684|gb|EJG33279.1| small GTP-binding domain protein [Streptococcus pneumoniae 2070035]
gi|395573570|gb|EJG34160.1| small GTP-binding domain protein [Streptococcus pneumoniae 2070005]
gi|395574478|gb|EJG35056.1| small GTP-binding domain protein [Streptococcus pneumoniae 2090008]
gi|395578877|gb|EJG39387.1| small GTP-binding domain protein [Streptococcus pneumoniae 2070108]
gi|395580012|gb|EJG40507.1| small GTP-binding domain protein [Streptococcus pneumoniae 2070109]
gi|395583117|gb|EJG43566.1| small GTP-binding domain protein [Streptococcus pneumoniae 2070335]
gi|395589029|gb|EJG49351.1| small GTP-binding domain protein [Streptococcus pneumoniae 2070768]
gi|395593847|gb|EJG54089.1| small GTP-binding domain protein [Streptococcus pneumoniae 2061376]
gi|395594914|gb|EJG55149.1| small GTP-binding domain protein [Streptococcus pneumoniae 2080076]
gi|395600450|gb|EJG60607.1| small GTP-binding domain protein [Streptococcus pneumoniae 2061617]
gi|395600679|gb|EJG60834.1| small GTP-binding domain protein [Streptococcus pneumoniae 2071247]
gi|395601559|gb|EJG61706.1| small GTP-binding domain protein [Streptococcus pneumoniae 2071004]
gi|395606290|gb|EJG66397.1| small GTP-binding domain protein [Streptococcus pneumoniae 2081074]
gi|395607548|gb|EJG67645.1| small GTP-binding domain protein [Streptococcus pneumoniae 2080913]
gi|395608072|gb|EJG68168.1| small GTP-binding domain protein [Streptococcus pneumoniae 2081685]
gi|395612852|gb|EJG72886.1| small GTP-binding domain protein [Streptococcus pneumoniae 2082170]
gi|395613631|gb|EJG73659.1| small GTP-binding domain protein [Streptococcus pneumoniae 2082239]
gi|395866771|gb|EJG77899.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae SPAR27]
gi|395867334|gb|EJG78458.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae SPAR48]
gi|395869122|gb|EJG80238.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae SPAR95]
gi|395873384|gb|EJG84476.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA52612]
gi|395873793|gb|EJG84883.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae SPAR55]
gi|395880961|gb|EJG92012.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA04672]
gi|395885746|gb|EJG96767.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA60190]
gi|395886537|gb|EJG97553.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA58771]
gi|395891886|gb|EJH02880.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA56348]
gi|395895414|gb|EJH06389.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA58581]
gi|395901446|gb|EJH12382.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA17484]
gi|395907287|gb|EJH18181.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA60132]
gi|395909371|gb|EJH20247.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA58981]
gi|395909725|gb|EJH20600.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA62681]
gi|395913267|gb|EJH24120.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA47562]
gi|444249649|gb|ELU56137.1| ribosome biogenesis GTPase Der [Streptococcus pneumoniae PCS8203]
gi|444252616|gb|ELU59078.1| ribosome biogenesis GTPase Der [Streptococcus pneumoniae PCS8106]
gi|444274093|gb|ELU79748.1| ribosome biogenesis GTPase Der [Streptococcus pneumoniae PNI0153]
gi|444278575|gb|ELU84015.1| ribosome biogenesis GTPase Der [Streptococcus pneumoniae PNI0076]
gi|444287943|gb|ELU92849.1| ribosome biogenesis GTPase Der [Streptococcus pneumoniae PNI0446]
Length = 436
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 107/194 (55%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K +ILAVNK ++P + +F++LG PLPIS++ G
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGEPLPISSVHG 149
Query: 342 TGTGELLDLVCSEL 355
GTG++LD + L
Sbjct: 150 IGTGDVLDAIVENL 163
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 30/155 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGR-SFWGEHEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + + EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTHFTDTDGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVINAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+ D+ IA + + K +I+ VNK ++ K
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGMIIVVNKWDTLEK 301
>gi|307707079|ref|ZP_07643876.1| small GTP-binding domain protein [Streptococcus mitis SK321]
gi|307617605|gb|EFN96775.1| small GTP-binding domain protein [Streptococcus mitis SK321]
Length = 436
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 107/194 (55%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K +ILAVNK ++P + +F++LG PLPIS++ G
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGEPLPISSVHG 149
Query: 342 TGTGELLDLVCSEL 355
GTG++LD + L
Sbjct: 150 IGTGDVLDAIVENL 163
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 30/155 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGR-SFWGEHEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + + EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTHFTDTDGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVINAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+ D+ IA + + K +I+ VNK ++ K
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGMIIVVNKWDTLEK 301
>gi|417694582|ref|ZP_12343769.1| GTP-binding protein engA [Streptococcus pneumoniae GA47901]
gi|332201131|gb|EGJ15202.1| GTP-binding protein engA [Streptococcus pneumoniae GA47901]
Length = 436
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 107/194 (55%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K +ILAVNK ++P + +F++LG PLPIS++ G
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGEPLPISSVHG 149
Query: 342 TGTGELLDLVCSEL 355
GTG++LD + L
Sbjct: 150 IGTGDVLDAIVENL 163
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 30/155 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGR-SFWGEHEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + + EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTHFTDTDGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVINAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+ D+ IA + + K +I+ VNK ++ K
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGMIIVVNKWDTLEK 301
>gi|288930105|ref|ZP_06423943.1| ribosome-associated GTPase EngA [Prevotella sp. oral taxon 317 str.
F0108]
gi|288328578|gb|EFC67171.1| ribosome-associated GTPase EngA [Prevotella sp. oral taxon 317 str.
F0108]
Length = 437
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 107/193 (55%), Gaps = 35/193 (18%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGG-VLNV 224
VAIVGRPNVGKS LFNRL AIV D G TRDR YG+ W EF +VDTGG V+N
Sbjct: 5 VAIVGRPNVGKSTLFNRLTKTRSAIVSDTAGTTRDRQYGKCDWAGREFSVVDTGGWVVN- 63
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+I ED I RQ A EE+ +++FLVD
Sbjct: 64 ---SDDIFED--------------------------AIRRQVLVATEEADLVLFLVDVNT 94
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTG 343
G+T DE++A LR+ + ++L VNK ++ + I + F+SLG P PISA +G+G
Sbjct: 95 GVTDLDEDVAQILRRTKVP--VVLVVNKADNNEQ-IYEAPAFYSLGLGDPFPISAATGSG 151
Query: 344 TGELLDLVCSELK 356
TG+LLD V ++LK
Sbjct: 152 TGDLLDAVIAQLK 164
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 75/155 (48%), Gaps = 29/155 (18%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
E +PR A+VGRPN GKS++ N +G +R IV + G TRD +Y R +F LVDT
Sbjct: 172 EDGIPRFAVVGRPNAGKSSIVNAFIGEDRNIVTEIAGTTRDSIYTRFDKFGFDFYLVDTA 231
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G+ + + + EDL + + ++ AIE S V I +
Sbjct: 232 GI----RRKNKVTEDLEFYSVM-----------------------RSIRAIEHSDVCILM 264
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
+D G+ + D I ++KN K +++ VNK +
Sbjct: 265 IDATRGIESQDMNIFQLIQKN--QKSLVVVVNKWD 297
>gi|419767715|ref|ZP_14293863.1| ribosome-associated GTPase EngA [Streptococcus mitis SK579]
gi|383352868|gb|EID30500.1| ribosome-associated GTPase EngA [Streptococcus mitis SK579]
Length = 436
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 107/194 (55%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K +ILAVNK ++P + +F++LG PLPIS++ G
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGEPLPISSVHG 149
Query: 342 TGTGELLDLVCSEL 355
GTG++LD + L
Sbjct: 150 IGTGDVLDAIVENL 163
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 30/155 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGR-SFWGEHEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + + EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTHFTDTDGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVINAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+ D+ IA + + K +I+ VNK ++ K
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGMIIVVNKWDTLEK 301
>gi|342164315|ref|YP_004768954.1| GTP-binding protein Der [Streptococcus pseudopneumoniae IS7493]
gi|341934197|gb|AEL11094.1| GTP-binding protein Der [Streptococcus pseudopneumoniae IS7493]
Length = 436
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 107/194 (55%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K +ILAVNK ++P + +F++LG PLPIS++ G
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGEPLPISSVHG 149
Query: 342 TGTGELLDLVCSEL 355
GTG++LD + L
Sbjct: 150 IGTGDVLDAIVENL 163
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 30/155 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGR-SFWGEHEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + + EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTHFTDTDGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVINAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+ D+ IA + + K +I+ VNK ++ K
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGMIIVVNKWDTLEK 301
>gi|366053178|ref|ZP_09450900.1| GTP-binding protein Der [Lactobacillus suebicus KCTC 3549]
Length = 436
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 110/193 (56%), Gaps = 34/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS +FNR+ G +IV D PGVTRDR+Y W F L+DTGG
Sbjct: 4 PVVAVVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYAHGEWIGKNFNLIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I + P T+ I +QA AI+E+ VI+F+VD +
Sbjct: 61 -----------------IEISDQPFVTQ----------IRQQAEIAIDEADVIVFIVDIK 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE++A L ++ +K ++LAVNK ++ ++ +V +F+SLGF P PIS + G
Sbjct: 94 TGMTDADEQVAQILYRS--NKPVVLAVNKVDN-QELRSEVYDFYSLGFGEPYPISGVHGI 150
Query: 343 GTGELLDLVCSEL 355
G G+LLD V +
Sbjct: 151 GIGDLLDAVVNNF 163
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 88/179 (49%), Gaps = 38/179 (21%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGR-SFWGEHEFMLVDTGGVLN 223
R +++GRPNVGKS+L N ++G +R IV + G TRD + + + + EF +VDT G+
Sbjct: 176 RFSLIGRPNVGKSSLVNAILGEHRVIVSNIAGTTRDAIDTKFTTEDDTEFTMVDTAGM-- 233
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K + I E+ T A+ R A AI++S +++ +++ +
Sbjct: 234 --KKRGKIYEN---------------TERYAMLR--------AMKAIDDSDIVLVVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKG--IMQV------SEFWSLGFSPL 334
G+ D+ IA + + + +I+ VNK ++ K MQ EF L ++P+
Sbjct: 269 EGIREFDKRIAGYAHE--AGRGVIIVVNKWDTVDKNNKTMQAFEQIIRDEFQYLSYAPI 325
>gi|297591047|ref|ZP_06949685.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus MN8]
gi|297575933|gb|EFH94649.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus MN8]
Length = 436
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 105/193 (54%), Gaps = 34/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y W H+F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTIFNRIVGERVSIVEDTPGVTRDRIYSSGEWLTHDFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I QA AI+E+ VIIF+V+ +
Sbjct: 62 ----------------------------EIGDAPFQTQIRAQAEIAIDEADVIIFMVNVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT +DE +A L K+ K ++LAVNK ++ V +F+SLGF P PIS G
Sbjct: 94 EGLTQSDEMVAQILYKS--KKPVVLAVNKVDNMEMR-TDVYDFYSLGFGEPYPISGAHGL 150
Query: 343 GTGELLDLVCSEL 355
G G+LLD V S
Sbjct: 151 GLGDLLDAVVSHF 163
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 82/162 (50%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R++I+GRPNVGKS+L N ++G +R IV + G TRD + + +++L+DT G+
Sbjct: 177 RLSIIGRPNVGKSSLVNAILGEDRVIVSNVAGTTRDAIDTEYSYDGQDYVLIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ ++D +
Sbjct: 234 -RKKGKVYE---------------STEKYSVLR--------ALKAIERSNVVLVVIDAEQ 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ +A + + K +++ VNK ++ K + +F
Sbjct: 270 GIIEQDKRVAGYAHEQ--GKAVVIVVNKWDTVEKDSKTMKKF 309
>gi|417941246|ref|ZP_12584533.1| ribosome-associated GTPase EngA [Streptococcus oralis SK313]
gi|343388539|gb|EGV01125.1| ribosome-associated GTPase EngA [Streptococcus oralis SK313]
Length = 436
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 107/194 (55%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K +ILAVNK ++P + +F++LG PLPIS++ G
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGEPLPISSVHG 149
Query: 342 TGTGELLDLVCSEL 355
GTG++LD + L
Sbjct: 150 IGTGDVLDAIVENL 163
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 30/155 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + + EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTHFTDADGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+ D+ IA + + K +I+ VNK ++ K
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGMIIVVNKWDTLEK 301
>gi|148984151|ref|ZP_01817446.1| phosphoglycerate dehydrogenase-related protein [Streptococcus
pneumoniae SP3-BS71]
gi|387757928|ref|YP_006064907.1| GTP-binding protein EngA [Streptococcus pneumoniae OXC141]
gi|418232708|ref|ZP_12859294.1| GTPase Der [Streptococcus pneumoniae GA07228]
gi|418237163|ref|ZP_12863729.1| GTPase Der [Streptococcus pneumoniae GA19690]
gi|419480547|ref|ZP_14020351.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA19101]
gi|419500252|ref|ZP_14039946.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA47597]
gi|147923440|gb|EDK74553.1| phosphoglycerate dehydrogenase-related protein [Streptococcus
pneumoniae SP3-BS71]
gi|301800517|emb|CBW33156.1| GTP-binding protein EngA [Streptococcus pneumoniae OXC141]
gi|353886021|gb|EHE65805.1| GTPase Der [Streptococcus pneumoniae GA07228]
gi|353891601|gb|EHE71355.1| GTPase Der [Streptococcus pneumoniae GA19690]
gi|379569716|gb|EHZ34683.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA19101]
gi|379599560|gb|EHZ64343.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA47597]
gi|429316552|emb|CCP36259.1| GTP-binding protein EngA [Streptococcus pneumoniae SPN034156]
gi|429319892|emb|CCP33210.1| GTP-binding protein EngA [Streptococcus pneumoniae SPN034183]
gi|429321709|emb|CCP35184.1| GTP-binding protein EngA [Streptococcus pneumoniae SPN994039]
gi|429323530|emb|CCP31225.1| GTP-binding protein EngA [Streptococcus pneumoniae SPN994038]
Length = 436
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 107/194 (55%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K +ILAVNK ++P + +F++LG PLPIS++ G
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGEPLPISSVHG 149
Query: 342 TGTGELLDLVCSEL 355
GTG++LD + L
Sbjct: 150 IGTGDVLDAIVENL 163
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 30/155 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGR-SFWGEHEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + + EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTHFTDTDGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVINAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+ D+ IA + + K +I+ VNK ++ K
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGMIIVVNKWDTLEK 301
>gi|418974548|ref|ZP_13522458.1| ribosome-associated GTPase EngA [Streptococcus oralis SK1074]
gi|383348975|gb|EID26927.1| ribosome-associated GTPase EngA [Streptococcus oralis SK1074]
Length = 436
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 107/194 (55%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K +ILAVNK ++P + +F++LG PLP+S++ G
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGEPLPVSSVHG 149
Query: 342 TGTGELLDLVCSEL 355
GTG++LD + L
Sbjct: 150 IGTGDVLDAIVENL 163
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 30/155 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGR-SFWGEHEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + + EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTHFTDTDGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+ D+ IA + + K +I+ VNK ++ K
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGMIIVVNKWDTLEK 301
>gi|358464382|ref|ZP_09174347.1| ribosome biogenesis GTPase Der [Streptococcus sp. oral taxon 058
str. F0407]
gi|357067148|gb|EHI77278.1| ribosome biogenesis GTPase Der [Streptococcus sp. oral taxon 058
str. F0407]
Length = 436
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/196 (41%), Positives = 108/196 (55%), Gaps = 38/196 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAI 339
+ G+T ADE +A L K + K +ILAVNK ++P R I +F++LG PLPIS++
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMRNDIF---DFYALGLGEPLPISSV 147
Query: 340 SGTGTGELLDLVCSEL 355
G GTG++LD + L
Sbjct: 148 HGIGTGDVLDAIVENL 163
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 30/155 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + + EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGATRDAIDTHFTDADGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+ D+ IA + + K +I+ VNK ++ K
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGMIIVVNKWDTLEK 301
>gi|260887150|ref|ZP_05898413.1| ribosome-associated GTPase EngA [Selenomonas sputigena ATCC 35185]
gi|330839080|ref|YP_004413660.1| ribosome-associated GTPase EngA [Selenomonas sputigena ATCC 35185]
gi|260863212|gb|EEX77712.1| ribosome-associated GTPase EngA [Selenomonas sputigena ATCC 35185]
gi|329746844|gb|AEC00201.1| ribosome-associated GTPase EngA [Selenomonas sputigena ATCC 35185]
Length = 442
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/191 (43%), Positives = 109/191 (57%), Gaps = 33/191 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L +IV D PGVTRDR+Y + W EF ++DTGG
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLGRKRVSIVDDLPGVTRDRIYLDAEWLGKEFTMIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I L T + + M +QA A+EE+ VI+FLVDG+
Sbjct: 61 ----------------------IELDTSDVILRSM----RQQAQIAMEEADVILFLVDGR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
AGLT ADEE+ LR K ++LAVNK +SP++ V EF++LG P+PISA +
Sbjct: 95 AGLTLADEEVGKMLRTT--KKPVLLAVNKIDSPKQE-SDVYEFYNLGLGDPVPISATNAM 151
Query: 343 GTGELLDLVCS 353
G+LLD + +
Sbjct: 152 NLGDLLDALVA 162
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 93/196 (47%), Gaps = 39/196 (19%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+A++GRPNVGKS+L N L+G R IV D G TRD + + +F+L+DT G+
Sbjct: 179 IAVIGRPNVGKSSLVNALLGEERVIVSDVAGTTRDAIDTHFMAEDTKFILIDTAGMRRKG 238
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
K +A + R M +A A++ + V++ ++D AG
Sbjct: 239 KI------------------------DAPIERYSVM---RALRAVDRADVVLVVLDATAG 271
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCE----SPRKGIMQVS-----EFWSLGFSP-LP 335
+T D++IA + ++ K ++L VNK + K ++ + E L ++P L
Sbjct: 272 ITEQDKKIAGYAHES--GKAVVLIVNKWDIYENKDEKSTLRFTDELRIELGFLQYAPVLY 329
Query: 336 ISAISGTGTGELLDLV 351
SA++ + DLV
Sbjct: 330 TSALTHQRVARVTDLV 345
>gi|417793725|ref|ZP_12440996.1| ribosome-associated GTPase EngA [Streptococcus oralis SK255]
gi|334272153|gb|EGL90523.1| ribosome-associated GTPase EngA [Streptococcus oralis SK255]
Length = 436
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 107/194 (55%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K +ILAVNK ++P + +F++LG PLPIS++ G
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGEPLPISSVHG 149
Query: 342 TGTGELLDLVCSEL 355
GTG++LD + L
Sbjct: 150 IGTGDVLDAIVENL 163
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 71/152 (46%), Gaps = 30/152 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + + EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTHFTDADGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCES 315
G+ D+ IA + + K +I+ VNK ++
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGMIIVVNKWDT 298
>gi|373501194|ref|ZP_09591559.1| GTP-binding protein engA [Prevotella micans F0438]
gi|371950101|gb|EHO67960.1| GTP-binding protein engA [Prevotella micans F0438]
Length = 437
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 110/194 (56%), Gaps = 33/194 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRL RAIV + G TRDR YG+ W EF +VDTGG V
Sbjct: 5 VAIVGRPNVGKSTLFNRLTKSRRAIVSETAGTTRDRQYGKCEWNGKEFSIVDTGGW--VV 62
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
KS +I ED I RQ A EE+ +++F+VD Q G
Sbjct: 63 KSD-DIFED--------------------------AIRRQVIVATEEADLVLFIVDTQTG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+T DE++A LR+ + +IL NK ++ + + +EF+ LG P+P+SA+SG G+
Sbjct: 96 ITDWDEDVAQILRRTKLP--VILVANKVDNNAQ-YYETAEFYKLGLGEPIPVSAMSGGGS 152
Query: 345 GELLDLVCSELKKV 358
G+LLD++ +L+ +
Sbjct: 153 GDLLDILLEKLQNL 166
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 77/156 (49%), Gaps = 29/156 (18%)
Query: 159 PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDT 218
PE LPR A+VGRPN GKS++ N +G +R IV + G TRD +Y R +F LVDT
Sbjct: 171 PEDELPRFAVVGRPNAGKSSIINAFIGEDRNIVTEIAGTTRDSIYTRYTKFGFDFYLVDT 230
Query: 219 GGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIF 278
G+ + + + EDL + + ++ +IE S V I
Sbjct: 231 AGI----RRKNRVTEDLEFYSVM-----------------------RSIRSIENSDVCIL 263
Query: 279 LVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
++D G+ A D I ++KN +K +++ VNK +
Sbjct: 264 MIDATRGIEAQDMNIFQLIQKN--NKSLVVVVNKWD 297
>gi|417849478|ref|ZP_12495398.1| ribosome-associated GTPase EngA [Streptococcus mitis SK1080]
gi|339456072|gb|EGP68667.1| ribosome-associated GTPase EngA [Streptococcus mitis SK1080]
Length = 436
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 107/194 (55%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K +ILAVNK ++P + +F++LG PLPIS++ G
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGEPLPISSVHG 149
Query: 342 TGTGELLDLVCSEL 355
GTG++LD + L
Sbjct: 150 IGTGDVLDAIVENL 163
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 30/155 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGR-SFWGEHEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + + EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTHFTDTDGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVINAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+ D+ IA + + K +I+ VNK ++ K
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGMIIVVNKWDTLEK 301
>gi|405760425|ref|YP_006701021.1| GTP-binding protein EngA [Streptococcus pneumoniae SPNA45]
gi|404277314|emb|CCM07824.1| GTP-binding protein EngA [Streptococcus pneumoniae SPNA45]
Length = 436
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 107/194 (55%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K +ILAVNK ++P + +F++LG PLPIS++ G
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGEPLPISSVHG 149
Query: 342 TGTGELLDLVCSEL 355
GTG++LD + L
Sbjct: 150 IGTGDVLDAIVENL 163
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 30/155 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGR-SFWGEHEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + + EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTHFTDTDGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVINAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+ D+ IA + + K +I+ VNK ++ K
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGMIIVVNKWDTLEK 301
>gi|424842166|ref|ZP_18266791.1| ribosome-associated GTPase EngA [Saprospira grandis DSM 2844]
gi|395320364|gb|EJF53285.1| ribosome-associated GTPase EngA [Saprospira grandis DSM 2844]
Length = 433
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/185 (40%), Positives = 107/185 (57%), Gaps = 33/185 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAI+GRPNVGKS FNR++G +AIV D GVTRDR YG + W F LVDTGG +
Sbjct: 5 VAIIGRPNVGKSTFFNRMLGMRQAIVDDVSGVTRDRQYGSTEWNGKRFHLVDTGGFIGDG 64
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
ED+ + I +Q AIEE+ V++F+VD + G
Sbjct: 65 -------EDV----------------------FAAAIRKQVRMAIEEAQVVVFMVDVETG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGTGT 344
+T D ++ L++ + K ++LAVNK ++ + +M + EFW++GF L PIS+ SG+GT
Sbjct: 96 ITDLDAQVGRLLKE--ISKPVLLAVNKVDNNERQLM-IHEFWAMGFDNLYPISSTSGSGT 152
Query: 345 GELLD 349
G+LLD
Sbjct: 153 GDLLD 157
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 89/194 (45%), Gaps = 37/194 (19%)
Query: 155 IGNVPE--HLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHE 212
I +PE + LP +AIVGRPN GKS+ N L+ R+IV D G TRD ++ E
Sbjct: 163 IPGIPEEDNRLPHIAIVGRPNAGKSSFVNLLLDEERSIVTDIAGTTRDSVHAHYNKFGQE 222
Query: 213 FMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEE 272
F+LVDT G+ + + ++ EDL + + +A ++E
Sbjct: 223 FILVDTAGL----RRKRSVKEDLEFYSVL-----------------------RAIRSLES 255
Query: 273 SCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS---- 328
+ + + ++D G+ A D I KN +K I++ VNK + K + E+
Sbjct: 256 ADICVLMLDASKGIEAQDLNIFRLAIKN--NKGIVIFVNKWDLVEKSTNTLKEYEDHIRE 313
Query: 329 --LGFSPLPISAIS 340
FS +PI IS
Sbjct: 314 RIAPFSDVPIVFIS 327
>gi|410477078|ref|YP_006743837.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae
gamPNI0373]
gi|444388613|ref|ZP_21186592.1| ribosome biogenesis GTPase Der [Streptococcus pneumoniae PCS125219]
gi|444389190|ref|ZP_21187107.1| ribosome biogenesis GTPase Der [Streptococcus pneumoniae PCS70012]
gi|444392717|ref|ZP_21190415.1| ribosome biogenesis GTPase Der [Streptococcus pneumoniae PCS81218]
gi|444394867|ref|ZP_21192417.1| ribosome biogenesis GTPase Der [Streptococcus pneumoniae PNI0002]
gi|444398160|ref|ZP_21195643.1| ribosome biogenesis GTPase Der [Streptococcus pneumoniae PNI0006]
gi|444399779|ref|ZP_21197214.1| ribosome biogenesis GTPase Der [Streptococcus pneumoniae PNI0007]
gi|444402945|ref|ZP_21200075.1| ribosome biogenesis GTPase Der [Streptococcus pneumoniae PNI0008]
gi|444407780|ref|ZP_21204447.1| ribosome biogenesis GTPase Der [Streptococcus pneumoniae PNI0010]
gi|444415057|ref|ZP_21211303.1| ribosome biogenesis GTPase Der [Streptococcus pneumoniae PNI0199]
gi|444418290|ref|ZP_21214277.1| ribosome biogenesis GTPase Der [Streptococcus pneumoniae PNI0360]
gi|444419682|ref|ZP_21215526.1| ribosome biogenesis GTPase Der [Streptococcus pneumoniae PNI0427]
gi|406370023|gb|AFS43713.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae
gamPNI0373]
gi|444248800|gb|ELU55300.1| ribosome biogenesis GTPase Der [Streptococcus pneumoniae PCS125219]
gi|444257790|gb|ELU64123.1| ribosome biogenesis GTPase Der [Streptococcus pneumoniae PCS70012]
gi|444259485|gb|ELU65799.1| ribosome biogenesis GTPase Der [Streptococcus pneumoniae PNI0002]
gi|444260817|gb|ELU67125.1| ribosome biogenesis GTPase Der [Streptococcus pneumoniae PNI0006]
gi|444262947|gb|ELU69192.1| ribosome biogenesis GTPase Der [Streptococcus pneumoniae PCS81218]
gi|444265541|gb|ELU71543.1| ribosome biogenesis GTPase Der [Streptococcus pneumoniae PNI0008]
gi|444268255|gb|ELU74128.1| ribosome biogenesis GTPase Der [Streptococcus pneumoniae PNI0007]
gi|444271376|gb|ELU77127.1| ribosome biogenesis GTPase Der [Streptococcus pneumoniae PNI0010]
gi|444280740|gb|ELU86095.1| ribosome biogenesis GTPase Der [Streptococcus pneumoniae PNI0199]
gi|444281796|gb|ELU87095.1| ribosome biogenesis GTPase Der [Streptococcus pneumoniae PNI0360]
gi|444286337|gb|ELU91325.1| ribosome biogenesis GTPase Der [Streptococcus pneumoniae PNI0427]
Length = 436
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 107/194 (55%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K +ILAVNK ++P + +F++LG PLPIS++ G
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGEPLPISSVHG 149
Query: 342 TGTGELLDLVCSEL 355
GTG++LD + L
Sbjct: 150 IGTGDVLDAIVENL 163
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 30/155 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGR-SFWGEHEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + + EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTHFTDTDGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVINAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+ D+ IA + + K +I+ VNK ++ K
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGMIIVVNKWDTLEK 301
>gi|148994026|ref|ZP_01823382.1| phosphoglycerate dehydrogenase-related protein [Streptococcus
pneumoniae SP9-BS68]
gi|168484900|ref|ZP_02709845.1| GTP-binding protein EngA [Streptococcus pneumoniae CDC1873-00]
gi|168488574|ref|ZP_02712773.1| GTP-binding protein EngA [Streptococcus pneumoniae SP195]
gi|307127923|ref|YP_003879954.1| GTP-binding protein EngA [Streptococcus pneumoniae 670-6B]
gi|417677440|ref|ZP_12326847.1| GTP-binding protein engA [Streptococcus pneumoniae GA17545]
gi|417679673|ref|ZP_12329069.1| GTP-binding protein engA [Streptococcus pneumoniae GA17570]
gi|418096818|ref|ZP_12733929.1| GTPase Der [Streptococcus pneumoniae GA16531]
gi|418113054|ref|ZP_12750054.1| GTPase Der [Streptococcus pneumoniae GA41538]
gi|418126361|ref|ZP_12763266.1| GTPase Der [Streptococcus pneumoniae GA44511]
gi|418133165|ref|ZP_12770036.1| GTPase Der [Streptococcus pneumoniae GA11304]
gi|418155698|ref|ZP_12792425.1| GTP-binding protein engA [Streptococcus pneumoniae GA16242]
gi|418162751|ref|ZP_12799432.1| GTP-binding protein engA [Streptococcus pneumoniae GA17328]
gi|418176495|ref|ZP_12813086.1| GTP-binding protein engA [Streptococcus pneumoniae GA41437]
gi|418192148|ref|ZP_12828650.1| GTPase Der [Streptococcus pneumoniae GA47388]
gi|418214904|ref|ZP_12841638.1| GTPase Der [Streptococcus pneumoniae GA54644]
gi|418219435|ref|ZP_12846100.1| GTPase Der [Streptococcus pneumoniae NP127]
gi|418226096|ref|ZP_12852724.1| GTPase Der [Streptococcus pneumoniae NP112]
gi|418234907|ref|ZP_12861483.1| GTPase Der [Streptococcus pneumoniae GA08780]
gi|418239232|ref|ZP_12865783.1| GTPase Der [Streptococcus pneumoniae NorthCarolina6A-23]
gi|419460520|ref|ZP_14000448.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA02270]
gi|419462870|ref|ZP_14002773.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA02714]
gi|419467326|ref|ZP_14007207.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA05248]
gi|419484937|ref|ZP_14024712.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA43257]
gi|419493835|ref|ZP_14033560.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA47210]
gi|419508805|ref|ZP_14048456.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA49542]
gi|419513104|ref|ZP_14052736.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA05578]
gi|419517311|ref|ZP_14056927.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA02506]
gi|419526421|ref|ZP_14065979.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA14373]
gi|421220791|ref|ZP_15677630.1| small GTP-binding domain protein [Streptococcus pneumoniae 2070425]
gi|421223046|ref|ZP_15679828.1| small GTP-binding domain protein [Streptococcus pneumoniae 2070531]
gi|421279483|ref|ZP_15730289.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA17301]
gi|421283850|ref|ZP_15734636.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA04216]
gi|421290270|ref|ZP_15741020.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA54354]
gi|421294729|ref|ZP_15745450.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA56113]
gi|421299171|ref|ZP_15749858.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA60080]
gi|421301561|ref|ZP_15752231.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA19998]
gi|421305663|ref|ZP_15756317.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA62331]
gi|147927493|gb|EDK78521.1| phosphoglycerate dehydrogenase-related protein [Streptococcus
pneumoniae SP9-BS68]
gi|172041949|gb|EDT49995.1| GTP-binding protein EngA [Streptococcus pneumoniae CDC1873-00]
gi|183572668|gb|EDT93196.1| GTP-binding protein EngA [Streptococcus pneumoniae SP195]
gi|306484985|gb|ADM91854.1| GTP-binding protein EngA [Streptococcus pneumoniae 670-6B]
gi|332072538|gb|EGI83021.1| GTP-binding protein engA [Streptococcus pneumoniae GA17570]
gi|332072881|gb|EGI83362.1| GTP-binding protein engA [Streptococcus pneumoniae GA17545]
gi|353768539|gb|EHD49063.1| GTPase Der [Streptococcus pneumoniae GA16531]
gi|353783416|gb|EHD63845.1| GTPase Der [Streptococcus pneumoniae GA41538]
gi|353795425|gb|EHD75773.1| GTPase Der [Streptococcus pneumoniae GA44511]
gi|353805048|gb|EHD85326.1| GTPase Der [Streptococcus pneumoniae GA11304]
gi|353819947|gb|EHE00136.1| GTP-binding protein engA [Streptococcus pneumoniae GA16242]
gi|353826813|gb|EHE06970.1| GTP-binding protein engA [Streptococcus pneumoniae GA17328]
gi|353840566|gb|EHE20630.1| GTP-binding protein engA [Streptococcus pneumoniae GA41437]
gi|353855234|gb|EHE35204.1| GTPase Der [Streptococcus pneumoniae GA47388]
gi|353869634|gb|EHE49515.1| GTPase Der [Streptococcus pneumoniae GA54644]
gi|353873795|gb|EHE53654.1| GTPase Der [Streptococcus pneumoniae NP127]
gi|353881293|gb|EHE61107.1| GTPase Der [Streptococcus pneumoniae NP112]
gi|353886529|gb|EHE66311.1| GTPase Der [Streptococcus pneumoniae GA08780]
gi|353892223|gb|EHE71972.1| GTPase Der [Streptococcus pneumoniae NorthCarolina6A-23]
gi|379530302|gb|EHY95542.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA02714]
gi|379530656|gb|EHY95895.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA02270]
gi|379543073|gb|EHZ08225.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA05248]
gi|379557061|gb|EHZ22108.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA14373]
gi|379581690|gb|EHZ46574.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA43257]
gi|379592408|gb|EHZ57224.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA47210]
gi|379610759|gb|EHZ75489.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA49542]
gi|379634269|gb|EHZ98834.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA05578]
gi|379639384|gb|EIA03928.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA02506]
gi|395586701|gb|EJG47068.1| small GTP-binding domain protein [Streptococcus pneumoniae 2070425]
gi|395587026|gb|EJG47388.1| small GTP-binding domain protein [Streptococcus pneumoniae 2070531]
gi|395878976|gb|EJG90038.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA17301]
gi|395880536|gb|EJG91588.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA04216]
gi|395887955|gb|EJG98969.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA54354]
gi|395893298|gb|EJH04285.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA56113]
gi|395899121|gb|EJH10065.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA19998]
gi|395900642|gb|EJH11580.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA60080]
gi|395904621|gb|EJH15535.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae GA62331]
Length = 436
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 107/194 (55%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K +ILAVNK ++P + +F++LG PLPIS++ G
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGEPLPISSVHG 149
Query: 342 TGTGELLDLVCSEL 355
GTG++LD + L
Sbjct: 150 IGTGDVLDAIVENL 163
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 30/155 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGR-SFWGEHEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + + EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTHFTDTDGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVINAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+ D+ IA + + K +I+ VNK ++ K
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGMIIVVNKWDTLEK 301
>gi|270293072|ref|ZP_06199283.1| ribosome-associated GTPase EngA [Streptococcus sp. M143]
gi|417914970|ref|ZP_12558598.1| ribosome biogenesis GTPase Der [Streptococcus mitis bv. 2 str.
SK95]
gi|270279051|gb|EFA24897.1| ribosome-associated GTPase EngA [Streptococcus sp. M143]
gi|342835562|gb|EGU69802.1| ribosome biogenesis GTPase Der [Streptococcus mitis bv. 2 str.
SK95]
Length = 436
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 107/194 (55%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K +ILAVNK ++P + +F++LG PLPIS++ G
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGEPLPISSVHG 149
Query: 342 TGTGELLDLVCSEL 355
GTG++LD + L
Sbjct: 150 IGTGDVLDAIVENL 163
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 30/155 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + + EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTHFTDADGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+ D+ IA + + K +I+ VNK ++ K
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGMIIVVNKWDTLEK 301
>gi|323486971|ref|ZP_08092286.1| hypothetical protein HMPREF9474_04037 [Clostridium symbiosum
WAL-14163]
gi|323692018|ref|ZP_08106266.1| GTP-binding protein engA [Clostridium symbiosum WAL-14673]
gi|355628115|ref|ZP_09049605.1| GTP-binding protein engA [Clostridium sp. 7_3_54FAA]
gi|323399743|gb|EGA92126.1| hypothetical protein HMPREF9474_04037 [Clostridium symbiosum
WAL-14163]
gi|323503941|gb|EGB19755.1| GTP-binding protein engA [Clostridium symbiosum WAL-14673]
gi|354819922|gb|EHF04355.1| GTP-binding protein engA [Clostridium sp. 7_3_54FAA]
Length = 444
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/193 (43%), Positives = 110/193 (56%), Gaps = 32/193 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN L G +IV D PGVTRDR+Y W + F L+DTGG+
Sbjct: 6 PVVAVVGRPNVGKSTLFNVLAGDMISIVKDTPGVTRDRIYADCTWLDKAFTLIDTGGI-- 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P+ T++ +A+M QA AI + VIIF+VD +
Sbjct: 64 ----EPD-------------------TKDVILAQM----REQAEIAIATADVIIFIVDVR 96
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT +D ++AD LRK+ K ++LAVNK +S +K V EF++LG P+ ISA S
Sbjct: 97 QGLTDSDSKVADMLRKS--KKPVVLAVNKVDSFQKFGNDVYEFYNLGIGDPVGISAASRL 154
Query: 343 GTGELLDLVCSEL 355
G GELLD V S
Sbjct: 155 GLGELLDAVVSHF 167
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 99/213 (46%), Gaps = 40/213 (18%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
PR+AIVG+PNVGKS++ N+L+G NR IV D G TRD + E++ +DT G+
Sbjct: 180 PRIAIVGKPNVGKSSIINKLLGENRVIVSDIAGTTRDAVDTEIIHNGTEYVFIDTAGLRR 239
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
SK + +E +I T+ A+E + V++ ++D
Sbjct: 240 KSKIKEE-LERYSIIRTV--------------------------TAVERADVVLVVIDAV 272
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF-----WSLGFSPLP--- 335
G+T D +IA + K II+ VNK ++ K + E+ +L F P
Sbjct: 273 EGVTEQDAKIAGIAHER--GKGIIIVVNKWDAIEKTDKTIYEYTNKIKMTLSFIPYAEFI 330
Query: 336 -ISAISGTGTGELLDLV--CSELKKVEVCIGFL 365
ISA +G +L +++ E + + + G L
Sbjct: 331 FISAATGQRINKLYEIIDMVRENQTLRIATGVL 363
>gi|212715828|ref|ZP_03323956.1| hypothetical protein BIFCAT_00729 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
gi|212661195|gb|EEB21770.1| hypothetical protein BIFCAT_00729 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
Length = 709
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/267 (37%), Positives = 129/267 (48%), Gaps = 44/267 (16%)
Query: 105 DFGIDVDALEREAKDAV-----REYSSLLSRQLIIQDETDDRKDSGKKQKKRKTTIGNVP 159
DFG +D L R DA+ R+Y+S L + DE D+ G + G P
Sbjct: 214 DFGETLDVLVRIVDDAIEEQQYRQYASNLDDYEL--DEGDEGLIDGSSFVGGERQSGPKP 271
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
+L A+VGRPNVGKS L NR++G A+V D PGVTRDR+ + W +F LVDTG
Sbjct: 272 VGVL---AVVGRPNVGKSTLVNRILGRRAAVVEDTPGVTRDRVSYDAEWAGTDFKLVDTG 328
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G EA V + S I QA A++ + ++ +
Sbjct: 329 GW------------------------------EADVEGIESAIASQAQIAVQLADAVVLV 358
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISA 338
VDGQ GLT DE I LR + K + LAVNK + R+ +EFW +G P ISA
Sbjct: 359 VDGQVGLTNTDERIVKMLRSS--GKPVTLAVNKVDD-RESEYLTAEFWKMGLGEPYGISA 415
Query: 339 ISGTGTGELLDLVCSELKKVEVCIGFL 365
+ G G GELLD LKK E GFL
Sbjct: 416 MHGRGIGELLDAALESLKKAEKTSGFL 442
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 148 QKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSF 207
+K KT+ P HL RVA+VGRPNVGKS+L N+L R +V D G TRD +
Sbjct: 433 KKAEKTSGFLTPSHL-RRVALVGRPNVGKSSLLNQLAHEERTVVNDLAGTTRDPVDEVVT 491
Query: 208 WGEHEFMLVDTGGV 221
+++ +DT G+
Sbjct: 492 VDGEDWLFIDTAGI 505
>gi|354558298|ref|ZP_08977554.1| GTP-binding protein engA [Desulfitobacterium metallireducens DSM
15288]
gi|353549023|gb|EHC18467.1| GTP-binding protein engA [Desulfitobacterium metallireducens DSM
15288]
Length = 441
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 106/193 (54%), Gaps = 33/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNRL GG AIV D PGVTRDR+Y S W +F ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTLFNRLAGGLVAIVEDRPGVTRDRLYRDSEWLGRKFTIIDTGGI-E 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
Q +I P+ + +QA AIEE+ VI+ +VD Q
Sbjct: 63 FRNEQTSI---------------------------PTQMRKQAEIAIEEADVIVLVVDAQ 95
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
LT DE IA LR++ K +++A NK ES ++SE + LG P+PISA+ G
Sbjct: 96 LELTPDDEMIAQTLRRSR--KPVVVAANKIESFANA--ELSELYRLGLGEPIPISAVHGM 151
Query: 343 GTGELLDLVCSEL 355
G+LLD V +
Sbjct: 152 NIGDLLDEVLTHF 164
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 97/199 (48%), Gaps = 44/199 (22%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHE---FMLVDTGGV 221
++A +GRPNVGKS+L N L+G R IV + PG TRD + +F EHE ++L+DT G+
Sbjct: 178 KIAAIGRPNVGKSSLVNSLLGEERVIVSNVPGTTRDAI-DTAF--EHEGKHYILIDTAGM 234
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ I T +V+R + A++ V++ L++
Sbjct: 235 RRKGR-------------------IDELTERYSVSR--------SLRAVDRCDVVLMLIE 267
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----LGF---SP 333
G+T D++IA + + K IIL VNK + K ++ F + LGF +P
Sbjct: 268 ATEGVTEQDKKIAGYAHE--AGKGIILVVNKWDLVDKDDKTMNRFENEIREELGFMRYAP 325
Query: 334 -LPISAISGTGTGELLDLV 351
L ISA +G LL+LV
Sbjct: 326 TLFISAKTGQRVNRLLELV 344
>gi|251778692|ref|ZP_04821612.1| ribosome-associated GTPase EngA [Clostridium botulinum E1 str.
'BoNT E Beluga']
gi|243083007|gb|EES48897.1| ribosome-associated GTPase EngA [Clostridium botulinum E1 str.
'BoNT E Beluga']
Length = 438
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/197 (40%), Positives = 111/197 (56%), Gaps = 33/197 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L G +IV D PGVTRDR+Y + W + F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAGKRISIVQDTPGVTRDRVYAEAEWLNYNFTMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P T + + + + RQA AIE + VI+F+VDG+
Sbjct: 62 ----EP--------------------TNDDIIMKQ---MRRQANIAIETADVIVFIVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLTAAD+E+A+ LRK+ K ++L VNK +S K EF++LG P+ ISA
Sbjct: 95 EGLTAADQEVANMLRKS--KKPVVLVVNKIDSL-KYEENSWEFYNLGIGDPITISASQAL 151
Query: 343 GTGELLDLVCSELKKVE 359
G G++LD V + +
Sbjct: 152 GLGDMLDRVVEHFDRFD 168
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 105/220 (47%), Gaps = 42/220 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R+A++G+PNVGKS+L N+L+G R IV D G TRD + + +F+L+DT G+
Sbjct: 178 RIAMIGKPNVGKSSLINKLLGEERLIVSDVAGTTRDAIDSYLETEQGKFILIDTAGLRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK + I I T A+IE++ V I ++D Q
Sbjct: 238 SKVKEEIERYSVIRT---------------------------YASIEKADVCILMIDAQD 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF-----WSLGFSP----LP 335
G+T DE+I + + ++K I++ VNK + K + +F SL F P L
Sbjct: 271 GVTEQDEKIIGYAHE--LNKAIMVLVNKWDLVEKDDKTMEKFKKDLQGSLKFMPYAEYLF 328
Query: 336 ISAISGTGTGELLDLV--CSELKKVEVCIGFL--LICNAI 371
ISA++G T ++L+L C V G L +I AI
Sbjct: 329 ISALTGQRTHKILELAKKCYNNYNKRVSTGILNDVISQAI 368
>gi|421487543|ref|ZP_15934945.1| ribosome-associated GTPase EngA [Streptococcus oralis SK304]
gi|400370473|gb|EJP23457.1| ribosome-associated GTPase EngA [Streptococcus oralis SK304]
Length = 436
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 107/194 (55%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K +ILAVNK ++P + +F++LG PLPIS++ G
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGEPLPISSVHG 149
Query: 342 TGTGELLDLVCSEL 355
GTG++LD + L
Sbjct: 150 IGTGDVLDAIVENL 163
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 30/155 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGR-SFWGEHEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + + EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTHFTDTDGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+ D+ IA + + K +I+ VNK ++ K
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGMIIVVNKWDTLEK 301
>gi|188587902|ref|YP_001920548.1| GTP-binding protein EngA [Clostridium botulinum E3 str. Alaska E43]
gi|238689667|sp|B2V3Z1.1|DER_CLOBA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|188498183|gb|ACD51319.1| ribosome-associated GTPase EngA [Clostridium botulinum E3 str.
Alaska E43]
Length = 438
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/197 (40%), Positives = 111/197 (56%), Gaps = 33/197 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L G +IV D PGVTRDR+Y + W + F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAGKRISIVQDTPGVTRDRVYAEAEWLNYNFTMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P T + + + + RQA AIE + VI+F+VDG+
Sbjct: 62 ----EP--------------------TNDDIIMKQ---MRRQANIAIETADVIVFIVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLTAAD+E+A+ LRK+ K ++L VNK +S K EF++LG P+ ISA
Sbjct: 95 EGLTAADQEVANMLRKS--KKPVVLVVNKIDSL-KYEENSWEFYNLGIGDPITISASQAL 151
Query: 343 GTGELLDLVCSELKKVE 359
G G++LD V + +
Sbjct: 152 GLGDMLDKVVEHFDRFD 168
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 105/220 (47%), Gaps = 42/220 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R+A++G+PNVGKS+L N+L+G R IV D G TRD + + +F+L+DT G+
Sbjct: 178 RIAMIGKPNVGKSSLINKLLGEERLIVSDVAGTTRDAIDSYLETEQGKFILIDTAGLRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK + I I T A+IE++ V I ++D Q
Sbjct: 238 SKVKEEIERYSVIRT---------------------------YASIEKADVCILMIDAQD 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF-----WSLGFSP----LP 335
G+T DE+I + + ++K I++ VNK + K + +F SL F P L
Sbjct: 271 GVTEQDEKIIGYAHE--LNKAIMVLVNKWDLVEKDDKTMEKFKKDLQGSLKFMPYAEYLF 328
Query: 336 ISAISGTGTGELLDLV--CSELKKVEVCIGFL--LICNAI 371
ISA++G T ++L+L C V G L +I AI
Sbjct: 329 ISALTGQRTHKILELAKKCYNNYNKRVSTGILNDVISQAI 368
>gi|219669400|ref|YP_002459835.1| GTP-binding protein EngA [Desulfitobacterium hafniense DCB-2]
gi|254783150|sp|B8G2P9.1|DER_DESHD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|219539660|gb|ACL21399.1| small GTP-binding protein [Desulfitobacterium hafniense DCB-2]
Length = 441
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 111/193 (57%), Gaps = 33/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNRL GG AIV + PGVTRDR+Y S W +F ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTLFNRLAGGLVAIVENRPGVTRDRLYRDSEWLGRKFTIIDTGGIEF 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
V+ E+ +I+ + + RQA AIEE+ VI+F++D Q
Sbjct: 64 VN-------ENTSIS---------------------AQMRRQAEIAIEEADVIVFVIDAQ 95
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
T D+ IA LR++ K +ILA NK E+ K ++ EF++LG P+PISA+ G
Sbjct: 96 ISPTPDDDMIAQTLRRS--GKPVILAANKVENFAK--TELYEFYNLGLGEPVPISAVHGM 151
Query: 343 GTGELLDLVCSEL 355
G+LLD V S
Sbjct: 152 NIGDLLDEVVSHF 164
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 103/199 (51%), Gaps = 44/199 (22%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHE---FMLVDTGGV 221
R+A+VGRPNVGKS+L N L+G R IV + PG TRD + +F EHE ++++DT G+
Sbjct: 178 RIAVVGRPNVGKSSLVNTLLGEERVIVSNIPGTTRDAI-DSAF--EHEGKHYIIIDTAGM 234
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ +E+L T + +V+R + A++ S VI+ L+D
Sbjct: 235 RRKGR-----IEEL--------------TEQYSVSR--------SLRAVDRSDVILMLLD 267
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----LGF---SP 333
G+T D++IA + + K I+L VNK + K ++ F LGF +P
Sbjct: 268 AGEGVTEQDKKIAGYAHE--AGKGIVLVVNKWDLIEKDDKTMNRFEKDIREELGFMQYAP 325
Query: 334 -LPISAISGTGTGELLDLV 351
L ISA +G +LLDLV
Sbjct: 326 TLFISAKTGQRVTKLLDLV 344
>gi|187935025|ref|YP_001885401.1| GTP-binding protein EngA [Clostridium botulinum B str. Eklund 17B]
gi|238691598|sp|B2THQ9.1|DER_CLOBB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|187723178|gb|ACD24399.1| ribosome-associated GTPase EngA [Clostridium botulinum B str.
Eklund 17B]
Length = 438
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/197 (40%), Positives = 111/197 (56%), Gaps = 33/197 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L G +IV D PGVTRDR+Y + W + F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAGKRISIVQDTPGVTRDRVYAEAEWLNYNFTMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P T + + + + RQA AIE + VI+F+VDG+
Sbjct: 62 ----EP--------------------TNDDIIMKQ---MRRQANIAIETADVIVFIVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLTAAD+E+A+ LRK+ K ++L VNK +S K EF++LG P+ ISA
Sbjct: 95 EGLTAADQEVANMLRKS--KKPVVLVVNKIDSL-KYEENSWEFYNLGIGDPITISASQAL 151
Query: 343 GTGELLDLVCSELKKVE 359
G G++LD V + +
Sbjct: 152 GLGDMLDRVVEHFDRFD 168
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 105/220 (47%), Gaps = 42/220 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R+A++G+PNVGKS+L N+L+G R IV D G TRD + + +F+L+DT G+
Sbjct: 178 RIAMIGKPNVGKSSLINKLLGEERLIVSDVAGTTRDAIDSYLETEQGKFILIDTAGLRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK + I I T A+IE++ V I ++D Q
Sbjct: 238 SKVKEEIERYSVIRT---------------------------YASIEKADVCILMIDAQD 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF-----WSLGFSP----LP 335
G+T DE+I + + ++K II+ VNK + K + +F SL F P L
Sbjct: 271 GVTEQDEKIIGYAHE--LNKAIIVLVNKWDLVEKDDKTMEKFKKDLQGSLKFMPYAEYLF 328
Query: 336 ISAISGTGTGELLDLV--CSELKKVEVCIGFL--LICNAI 371
ISA++G T ++L+L C V G L +I AI
Sbjct: 329 ISALTGQRTHKILELAKKCYNNYNKRVSTGILNDVISKAI 368
>gi|18310737|ref|NP_562671.1| GTP-binding protein EngA [Clostridium perfringens str. 13]
gi|110798819|ref|YP_696441.1| GTP-binding protein EngA [Clostridium perfringens ATCC 13124]
gi|110803315|ref|YP_699041.1| GTP-binding protein EngA [Clostridium perfringens SM101]
gi|168207282|ref|ZP_02633287.1| putative GTP-binding protein Era [Clostridium perfringens E str.
JGS1987]
gi|168210612|ref|ZP_02636237.1| putative GTP-binding protein Era [Clostridium perfringens B str.
ATCC 3626]
gi|168214232|ref|ZP_02639857.1| putative GTP-binding protein Era [Clostridium perfringens CPE str.
F4969]
gi|168217042|ref|ZP_02642667.1| putative GTP-binding protein Era [Clostridium perfringens NCTC
8239]
gi|169342731|ref|ZP_02863772.1| putative GTP-binding protein Era [Clostridium perfringens C str.
JGS1495]
gi|182625851|ref|ZP_02953617.1| putative GTP-binding protein Era [Clostridium perfringens D str.
JGS1721]
gi|422346425|ref|ZP_16427339.1| GTPase Der [Clostridium perfringens WAL-14572]
gi|422874675|ref|ZP_16921160.1| GTP-binding protein Der [Clostridium perfringens F262]
gi|26006720|sp|Q8XJK1.1|DER_CLOPE RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|123148666|sp|Q0TPJ9.1|DER_CLOP1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|123341699|sp|Q0SS66.1|DER_CLOPS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|18145418|dbj|BAB81461.1| probable GTP binding protein [Clostridium perfringens str. 13]
gi|110673466|gb|ABG82453.1| ribosome-associated GTPase EngA [Clostridium perfringens ATCC
13124]
gi|110683816|gb|ABG87186.1| ribosome-associated GTPase EngA [Clostridium perfringens SM101]
gi|169299237|gb|EDS81307.1| putative GTP-binding protein Era [Clostridium perfringens C str.
JGS1495]
gi|170661368|gb|EDT14051.1| putative GTP-binding protein Era [Clostridium perfringens E str.
JGS1987]
gi|170711316|gb|EDT23498.1| putative GTP-binding protein Era [Clostridium perfringens B str.
ATCC 3626]
gi|170714259|gb|EDT26441.1| putative GTP-binding protein Era [Clostridium perfringens CPE str.
F4969]
gi|177908885|gb|EDT71377.1| putative GTP-binding protein Era [Clostridium perfringens D str.
JGS1721]
gi|182380862|gb|EDT78341.1| putative GTP-binding protein Era [Clostridium perfringens NCTC
8239]
gi|373225970|gb|EHP48297.1| GTPase Der [Clostridium perfringens WAL-14572]
gi|380304316|gb|EIA16605.1| GTP-binding protein Der [Clostridium perfringens F262]
Length = 438
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/191 (42%), Positives = 111/191 (58%), Gaps = 35/191 (18%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN+L G +IV D PGVTRDR+Y S W +F ++DTGG+
Sbjct: 4 PIVAMVGRPNVGKSTLFNKLAGKRISIVQDTPGVTRDRVYAESEWLNRKFTMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P + + V +M RQA AIE + VI+F+VDG+
Sbjct: 62 ----EPE-------------------SSDIIVKQM----RRQAQIAIEMADVIVFVVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS-EFWSLGFS-PLPISAISG 341
GLTAAD+E+A LRK+ K ++L VNK + R + + S EF++LG P+ ISA G
Sbjct: 95 EGLTAADQEVAQMLRKS--KKPVVLVVNKID--RLALEENSYEFYNLGIGDPITISASQG 150
Query: 342 TGTGELLDLVC 352
G G++LD V
Sbjct: 151 LGLGDMLDEVV 161
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 99/212 (46%), Gaps = 40/212 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R+A++G+PNVGKS+L NRL+G R IV + PG TRD + + +F+LVDT G+
Sbjct: 178 RIAMIGKPNVGKSSLINRLLGEERVIVSNVPGTTRDSIDSYLETEDGKFILVDTAGLRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK + I I T AAIE++ V I ++D +
Sbjct: 238 SKVKEEIERYSVIRT---------------------------YAAIEKADVAILVIDAEQ 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF-----WSLGFSP----LP 335
G+T DE+I + + M+K I++ VNK + K +S + L F P L
Sbjct: 271 GITEQDEKIIGYAHE--MNKAIMVVVNKWDLIEKDDKTLSNYQKDLQQKLKFMPYAKYLF 328
Query: 336 ISAISGTGTGELLDLV--CSELKKVEVCIGFL 365
ISA++G ++L C + V G L
Sbjct: 329 ISALTGQRVHKILSTAKYCYDNYSKRVSTGLL 360
>gi|149006625|ref|ZP_01830324.1| phosphoglycerate dehydrogenase-related protein [Streptococcus
pneumoniae SP18-BS74]
gi|147761923|gb|EDK68886.1| phosphoglycerate dehydrogenase-related protein [Streptococcus
pneumoniae SP18-BS74]
Length = 358
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 107/194 (55%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K +ILAVNK ++P + +F++LG PLPIS++ G
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGEPLPISSVHG 149
Query: 342 TGTGELLDLVCSEL 355
GTG++LD + L
Sbjct: 150 IGTGDVLDAIVENL 163
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 30/155 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGR-SFWGEHEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + + EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTHFTDTDGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVINAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+ D+ IA + + K +I+ VNK ++ K
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGMIIVVNKWDTLEK 301
>gi|406586966|ref|ZP_11061883.1| GTP-binding protein Der [Streptococcus sp. GMD1S]
gi|419817488|ref|ZP_14341647.1| GTP-binding protein Der [Streptococcus sp. GMD4S]
gi|404465874|gb|EKA11257.1| GTP-binding protein Der [Streptococcus sp. GMD4S]
gi|404473538|gb|EKA17872.1| GTP-binding protein Der [Streptococcus sp. GMD1S]
Length = 436
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/196 (40%), Positives = 108/196 (55%), Gaps = 38/196 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAI 339
+ G+T ADE +A L K + K +ILAVNK ++P R I +F++LG PLPIS++
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMRNDIF---DFYALGLGEPLPISSV 147
Query: 340 SGTGTGELLDLVCSEL 355
G GTG++LD + L
Sbjct: 148 HGIGTGDVLDAIVENL 163
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 30/155 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGR-SFWGEHEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + + EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTHFTDTDGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+ D+ IA + + K +I+ VNK ++ K
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGMIIVVNKWDTLEK 301
>gi|384550236|ref|YP_005739488.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
JKD6159]
gi|302333085|gb|ADL23278.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
JKD6159]
Length = 436
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 105/193 (54%), Gaps = 34/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y W H+F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTIFNRIVGERVSIVEDTPGVTRDRIYSSGEWLTHDFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I QA AI+E+ VIIF+V+ +
Sbjct: 62 ----------------------------EIGDAPFQTQIRAQAEIAIDEADVIIFMVNVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT +DE +A L K+ K ++LAVNK ++ V +F+SLGF P PIS G
Sbjct: 94 EGLTQSDEMVAQILYKS--KKPVVLAVNKVDNMEMR-TDVYDFYSLGFGEPYPISGSHGL 150
Query: 343 GTGELLDLVCSEL 355
G G+LLD V S
Sbjct: 151 GLGDLLDAVVSHF 163
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 81/162 (50%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R++I+GRPNVGKS+L N ++G +R IV + G TRD + + +++L+DT G+
Sbjct: 177 RLSIIGRPNVGKSSLVNAILGEDRVIVSNVAGTTRDAIDTEYSYDGQDYVLIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ ++D +
Sbjct: 234 -RKKGKVYE---------------STEKYSVLR--------ALKAIERSNVVLVVIDAEQ 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ +A + + K ++ VNK ++ K + +F
Sbjct: 270 GIIEQDKRVAGYAHEQ--GKAVVTVVNKWDTVEKDSKTMKKF 309
>gi|418427616|ref|ZP_13000623.1| GTPase Der [Staphylococcus aureus subsp. aureus VRS2]
gi|387718169|gb|EIK06155.1| GTPase Der [Staphylococcus aureus subsp. aureus VRS2]
Length = 436
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 105/193 (54%), Gaps = 34/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y W H+F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTIFNRIVGERVSIVEDTPGVTRDRIYSSGEWLTHDFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I QA AI+E+ VIIF+V+ +
Sbjct: 62 ----------------------------EIGDAPFQTQIRAQAEIAIDEADVIIFMVNVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT +DE +A L K+ K ++LAVNK ++ V +F+SLGF P PIS G
Sbjct: 94 EGLTQSDEMVAQILYKS--KKPVVLAVNKVDNMEMR-TDVYDFYSLGFGEPYPISGSHGL 150
Query: 343 GTGELLDLVCSEL 355
G G+LLD V S
Sbjct: 151 GLGDLLDAVVSHF 163
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 82/162 (50%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R++I+GRPNVGKS+L N ++G +R IV + G TRD + + +++L+DT G+
Sbjct: 177 RLSIIGRPNVGKSSLVNAILGEDRVIVSNVAGTTRDAIDTEYSYDGQDYVLIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ ++D +
Sbjct: 234 -RKKGKVYE---------------STEKYSVLR--------ALKAIERSNVVLVVIDAEQ 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ +A + + K +++ VNK ++ K + +F
Sbjct: 270 GIIEQDKRVAGYAHEQ--GKAVVIVVNKWDTVEKDSKTMKKF 309
>gi|418321724|ref|ZP_12933063.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus VCU006]
gi|418875414|ref|ZP_13429671.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIGC93]
gi|365224339|gb|EHM65604.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus VCU006]
gi|377769970|gb|EHT93736.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIGC93]
Length = 436
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 105/193 (54%), Gaps = 34/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y W H+F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTIFNRIVGERVSIVEDTPGVTRDRIYSSGEWLTHDFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I QA AI+E+ VIIF+V+ +
Sbjct: 62 ----------------------------EIGDAPFQTQIRAQAEIAIDEADVIIFMVNVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT +DE +A L K+ K ++LAVNK ++ V +F+SLGF P PIS G
Sbjct: 94 EGLTQSDEMVAQILYKS--KKPVVLAVNKVDNMEMR-TDVYDFYSLGFGEPYPISGSHGL 150
Query: 343 GTGELLDLVCSEL 355
G G+LLD V S
Sbjct: 151 GLGDLLDAVVSHF 163
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 82/162 (50%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R++I+GRPNVGKS+L N ++G +R IV + G TRD + + +++L+DT G+
Sbjct: 177 RLSIIGRPNVGKSSLVNAILGEDRVIVSNVAGTTRDAIDTEYSYDGQDYVLIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ ++D +
Sbjct: 234 -RKKGKVYE---------------STEKYSVLR--------ALKAIERSNVVLVVIDAEQ 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ +A + + K +++ VNK ++ K + +F
Sbjct: 270 GIIEQDKRVAGYAHEQ--GKAVVIVVNKWDTVEKDSKTMKKF 309
>gi|409124107|ref|ZP_11223502.1| GTP-binding protein Der [Gillisia sp. CBA3202]
Length = 435
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/191 (41%), Positives = 109/191 (57%), Gaps = 33/191 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS FNRL+ AIV GVTRDR YG+S W F L+DTGG +
Sbjct: 5 VAIVGRPNVGKSTFFNRLIQRREAIVDSVSGVTRDRHYGKSDWNGQVFSLIDTGGYV--- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
K ++ E S I++Q AIEE+ IIF+VD ++G
Sbjct: 62 KGSDDVFE--------------------------SEIDKQVILAIEEADAIIFMVDVESG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGTGT 344
+T DE++A+ LRK DK ++LAVNK ++ ++ + EF++LG PI++ SG+GT
Sbjct: 96 ITGMDEDVANLLRKQ--DKPVLLAVNKVDNSKR-LENAVEFYNLGLGEFYPIASTSGSGT 152
Query: 345 GELLDLVCSEL 355
GELLD + L
Sbjct: 153 GELLDALVEVL 163
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 68/152 (44%), Gaps = 29/152 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LPR A+VGRPN GKS+ N L+G R IV D G TRD + + EF LVDT G+
Sbjct: 174 LPRFAVVGRPNAGKSSFINALIGEERYIVTDVAGTTRDSIDTKYNRYGFEFNLVDTAGIR 233
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
SK + EDL + + ++ AIE V + ++D
Sbjct: 234 RKSK----VKEDLEFYSVM-----------------------RSVRAIENCDVCLIVLDA 266
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
G + I WL + K I++ VNK +
Sbjct: 267 TRGFDGQVQNIF-WLAQR-NRKGIVILVNKWD 296
>gi|374296822|ref|YP_005047013.1| ribosome-associated GTPase EngA [Clostridium clariflavum DSM 19732]
gi|359826316|gb|AEV69089.1| ribosome-associated GTPase EngA [Clostridium clariflavum DSM 19732]
Length = 440
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 107/189 (56%), Gaps = 32/189 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS FN L G +IV D PGVTRDR+Y W +F L+DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTFFNYLAGKRISIVEDTPGVTRDRIYTEVEWRNRKFTLIDTGGIEP 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
S+ + IM+ + + QA AIE + VIIF+VD +
Sbjct: 64 YSEDK--IMKQM---------------------------KNQAEIAIETADVIIFMVDMK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGT 342
GLTA+D E+A LRK+ K IILAVNK + + +V EF++LG L PIS+I G
Sbjct: 95 DGLTASDREVATMLRKS--KKPIILAVNKVDKVGELPAEVYEFYNLGMDNLMPISSIHGL 152
Query: 343 GTGELLDLV 351
G G+LLD V
Sbjct: 153 GVGDLLDEV 161
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 92/200 (46%), Gaps = 36/200 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VA+VG+PN GKS+L N+++G R IV D PG TRD + E +F+ +DT G+
Sbjct: 179 KVAVVGKPNAGKSSLINKILGEERVIVSDIPGTTRDAIDTYVENEEGKFVFIDTAGIRRK 238
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK NI AI ++ AIE + V + ++D
Sbjct: 239 SKITENIERYSAI---------------------------RSWTAIERADVCLIMIDAVE 271
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFW-----SLGFSPL-PISA 338
G+T D +IA + + K I+ VNK + K + E+ LGF P+
Sbjct: 272 GVTEQDTKIAGYAHEQ--GKASIVVVNKWDLVEKTTGTLEEYRKTVLEKLGFMLYAPVVF 329
Query: 339 ISGTGTGELLDLVCSELKKV 358
IS TG+ +D + + +K V
Sbjct: 330 ISAK-TGQRVDKIYNLVKYV 348
>gi|15924465|ref|NP_371999.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus Mu50]
gi|15927056|ref|NP_374589.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus N315]
gi|21283093|ref|NP_646181.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus MW2]
gi|49483662|ref|YP_040886.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
MRSA252]
gi|49486314|ref|YP_043535.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57650430|ref|YP_186359.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus COL]
gi|88195209|ref|YP_500010.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|148267959|ref|YP_001246902.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus JH9]
gi|150394023|ref|YP_001316698.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus JH1]
gi|151221596|ref|YP_001332418.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus str.
Newman]
gi|156979794|ref|YP_001442053.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus Mu3]
gi|221140958|ref|ZP_03565451.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus str.
JKD6009]
gi|253315982|ref|ZP_04839195.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus str.
CF-Marseille]
gi|253732117|ref|ZP_04866282.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253733278|ref|ZP_04867443.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
TCH130]
gi|255006261|ref|ZP_05144862.2| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
Mu50-omega]
gi|257425539|ref|ZP_05601964.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257428198|ref|ZP_05604596.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 65-1322]
gi|257430828|ref|ZP_05607210.1| small GTP-binding protein [Staphylococcus aureus subsp. aureus
68-397]
gi|257433587|ref|ZP_05609945.1| GTP-binding protein engA [Staphylococcus aureus subsp. aureus
E1410]
gi|257436428|ref|ZP_05612475.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus M876]
gi|257795470|ref|ZP_05644449.1| ribosome-associated GTPase EngA [Staphylococcus aureus A9781]
gi|258413278|ref|ZP_05681554.1| small GTP-binding protein [Staphylococcus aureus A9763]
gi|258420615|ref|ZP_05683557.1| ribosome-associated GTPase EngA [Staphylococcus aureus A9719]
gi|258422494|ref|ZP_05685402.1| ribosome-associated GTPase EngA [Staphylococcus aureus A9635]
gi|258426810|ref|ZP_05688030.1| GTP-binding protein engA [Staphylococcus aureus A9299]
gi|258444808|ref|ZP_05693137.1| GTP-binding protein engA [Staphylococcus aureus A8115]
gi|258447358|ref|ZP_05695502.1| small GTP-binding protein [Staphylococcus aureus A6300]
gi|258449757|ref|ZP_05697858.1| GTP-binding protein engA [Staphylococcus aureus A6224]
gi|258451133|ref|ZP_05699168.1| GTP-binding protein engA [Staphylococcus aureus A5948]
gi|258454573|ref|ZP_05702537.1| ribosome-associated GTPase EngA [Staphylococcus aureus A5937]
gi|262048997|ref|ZP_06021876.1| GTP-binding protein EngA [Staphylococcus aureus D30]
gi|262051644|ref|ZP_06023864.1| GTP-binding protein EngA [Staphylococcus aureus 930918-3]
gi|269203100|ref|YP_003282369.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus ED98]
gi|282892972|ref|ZP_06301207.1| ribosome-associated GTPase EngA [Staphylococcus aureus A8117]
gi|282904057|ref|ZP_06311945.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus C160]
gi|282905821|ref|ZP_06313676.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282911052|ref|ZP_06318854.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus WBG10049]
gi|282914265|ref|ZP_06322052.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus M899]
gi|282919188|ref|ZP_06326923.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus C427]
gi|282921722|ref|ZP_06329439.1| ribosome-associated GTPase EngA [Staphylococcus aureus A9765]
gi|282924372|ref|ZP_06332046.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus C101]
gi|282928003|ref|ZP_06335612.1| ribosome-associated GTPase EngA [Staphylococcus aureus A10102]
gi|283958239|ref|ZP_06375690.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus A017934/97]
gi|284024473|ref|ZP_06378871.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus 132]
gi|293501290|ref|ZP_06667141.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 58-424]
gi|293510252|ref|ZP_06668960.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus M809]
gi|293526847|ref|ZP_06671531.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus M1015]
gi|295407224|ref|ZP_06817024.1| ribosome-associated GTPase EngA [Staphylococcus aureus A8819]
gi|295427983|ref|ZP_06820615.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|296275328|ref|ZP_06857835.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus MR1]
gi|297207866|ref|ZP_06924299.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|297244648|ref|ZP_06928531.1| ribosome-associated GTPase EngA [Staphylococcus aureus A8796]
gi|300911951|ref|ZP_07129394.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus TCH70]
gi|304380942|ref|ZP_07363601.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|379014684|ref|YP_005290920.1| GTP-binding protein Der [Staphylococcus aureus subsp. aureus VC40]
gi|379021189|ref|YP_005297851.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus M013]
gi|384547715|ref|YP_005736968.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
ED133]
gi|384862076|ref|YP_005744796.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus str.
JKD6008]
gi|384864698|ref|YP_005750057.1| small GTP-binding domain protein [Staphylococcus aureus subsp.
aureus ECT-R 2]
gi|384867617|ref|YP_005747813.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus TCH60]
gi|384870016|ref|YP_005752730.1| GTP-binding protein engA [Staphylococcus aureus subsp. aureus
T0131]
gi|385781699|ref|YP_005757870.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 11819-97]
gi|386729173|ref|YP_006195556.1| GTP-binding protein [Staphylococcus aureus subsp. aureus 71193]
gi|386831026|ref|YP_006237680.1| putative GTPase [Staphylococcus aureus subsp. aureus HO 5096 0412]
gi|387143083|ref|YP_005731476.1| putative GTPase [Staphylococcus aureus subsp. aureus TW20]
gi|387150616|ref|YP_005742180.1| GTP-binding protein EngA [Staphylococcus aureus 04-02981]
gi|387602748|ref|YP_005734269.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
ST398]
gi|404478822|ref|YP_006710252.1| GTPase [Staphylococcus aureus 08BA02176]
gi|415682272|ref|ZP_11447588.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
CGS00]
gi|415693541|ref|ZP_11455320.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
CGS03]
gi|416841186|ref|ZP_11904248.1| GTP-binding protein EngA [Staphylococcus aureus O11]
gi|416847529|ref|ZP_11907211.1| GTP-binding protein EngA [Staphylococcus aureus O46]
gi|417650507|ref|ZP_12300277.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
21189]
gi|417651458|ref|ZP_12301221.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
21172]
gi|417654332|ref|ZP_12304055.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
21193]
gi|417797321|ref|ZP_12444517.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21305]
gi|417800220|ref|ZP_12447344.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21310]
gi|417800795|ref|ZP_12447903.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21318]
gi|417889153|ref|ZP_12533251.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
21195]
gi|417889885|ref|ZP_12533964.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
21200]
gi|417893012|ref|ZP_12537049.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
21201]
gi|417896766|ref|ZP_12540709.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
21235]
gi|417898011|ref|ZP_12541937.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
21259]
gi|417901590|ref|ZP_12545466.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
21266]
gi|417905407|ref|ZP_12549218.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
21269]
gi|418277084|ref|ZP_12891765.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21178]
gi|418284125|ref|ZP_12896857.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21202]
gi|418284496|ref|ZP_12897216.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21209]
gi|418307207|ref|ZP_12918934.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21194]
gi|418310327|ref|ZP_12921872.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21331]
gi|418312082|ref|ZP_12923595.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21334]
gi|418316382|ref|ZP_12927820.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21340]
gi|418424621|ref|ZP_12997738.1| GTPase Der [Staphylococcus aureus subsp. aureus VRS1]
gi|418430450|ref|ZP_13003365.1| GTPase Der [Staphylococcus aureus subsp. aureus VRS3a]
gi|418433430|ref|ZP_13006192.1| GTPase Der [Staphylococcus aureus subsp. aureus VRS4]
gi|418437091|ref|ZP_13008890.1| GTP-binding protein engA [Staphylococcus aureus subsp. aureus VRS5]
gi|418439957|ref|ZP_13011662.1| GTP-binding protein engA [Staphylococcus aureus subsp. aureus VRS6]
gi|418443013|ref|ZP_13014613.1| GTPase Der [Staphylococcus aureus subsp. aureus VRS7]
gi|418446072|ref|ZP_13017548.1| GTP-binding protein engA [Staphylococcus aureus subsp. aureus VRS8]
gi|418449020|ref|ZP_13020408.1| GTP-binding protein engA [Staphylococcus aureus subsp. aureus VRS9]
gi|418451838|ref|ZP_13023172.1| GTP-binding protein engA [Staphylococcus aureus subsp. aureus
VRS10]
gi|418454895|ref|ZP_13026155.1| GTP-binding protein engA [Staphylococcus aureus subsp. aureus
VRS11a]
gi|418457769|ref|ZP_13028971.1| GTP-binding protein engA [Staphylococcus aureus subsp. aureus
VRS11b]
gi|418558989|ref|ZP_13123536.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21252]
gi|418562533|ref|ZP_13126990.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21262]
gi|418565367|ref|ZP_13129774.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21264]
gi|418568499|ref|ZP_13132844.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21272]
gi|418570523|ref|ZP_13134790.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21283]
gi|418572830|ref|ZP_13137032.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21333]
gi|418579334|ref|ZP_13143429.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1114]
gi|418582339|ref|ZP_13146417.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1605]
gi|418600439|ref|ZP_13163903.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21343]
gi|418603309|ref|ZP_13166696.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21345]
gi|418640269|ref|ZP_13202501.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-3]
gi|418645414|ref|ZP_13207539.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-55]
gi|418652938|ref|ZP_13214900.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-99]
gi|418657614|ref|ZP_13219379.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-105]
gi|418662046|ref|ZP_13223600.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-122]
gi|418871252|ref|ZP_13425633.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-125]
gi|418881155|ref|ZP_13435373.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1213]
gi|418884008|ref|ZP_13438201.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1769]
gi|418886738|ref|ZP_13440886.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1150]
gi|418889292|ref|ZP_13443425.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1524]
gi|418892141|ref|ZP_13446254.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1176]
gi|418898045|ref|ZP_13452115.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIGC341D]
gi|418900913|ref|ZP_13454970.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1214]
gi|418903715|ref|ZP_13457756.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1770]
gi|418906418|ref|ZP_13460444.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIGC345D]
gi|418909221|ref|ZP_13463220.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG149]
gi|418912085|ref|ZP_13466066.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG547]
gi|418914573|ref|ZP_13468545.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIGC340D]
gi|418917305|ref|ZP_13471264.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1267]
gi|418920555|ref|ZP_13474487.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIGC348]
gi|418923088|ref|ZP_13477004.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1233]
gi|418925737|ref|ZP_13479639.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG2018]
gi|418928759|ref|ZP_13482645.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1612]
gi|418931549|ref|ZP_13485390.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1750]
gi|418934382|ref|ZP_13488204.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIGC128]
gi|418947094|ref|ZP_13499484.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-157]
gi|418951524|ref|ZP_13503610.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-160]
gi|418955624|ref|ZP_13507561.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-189]
gi|418978127|ref|ZP_13525928.1| GTP-binding protein [Staphylococcus aureus subsp. aureus DR10]
gi|418982417|ref|ZP_13530125.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1242]
gi|418986084|ref|ZP_13533770.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1500]
gi|418988480|ref|ZP_13536152.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1835]
gi|418991337|ref|ZP_13538998.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1096]
gi|418994144|ref|ZP_13541779.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG290]
gi|419786030|ref|ZP_14311771.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-M]
gi|424773572|ref|ZP_18200629.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
CM05]
gi|424785311|ref|ZP_18212114.1| GTP-binding protein EngA [Staphylococcus aureus CN79]
gi|440707247|ref|ZP_20887946.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21282]
gi|440734925|ref|ZP_20914536.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus DSM
20231]
gi|443637847|ref|ZP_21121913.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21236]
gi|443638774|ref|ZP_21122807.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21196]
gi|448741639|ref|ZP_21723600.1| ribosome-associated GTPase EngA [Staphylococcus aureus KT/314250]
gi|448742923|ref|ZP_21724837.1| ribosome-associated GTPase EngA [Staphylococcus aureus KT/Y21]
gi|54037051|sp|P64060.1|DER_STAAN RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|54037052|sp|P64061.1|DER_STAAW RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|54040975|sp|P64059.1|DER_STAAM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|56748972|sp|Q6G988.1|DER_STAAS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|56749026|sp|Q6GGT6.1|DER_STAAR RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|71151865|sp|Q5HFU8.1|DER_STAAC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|122539535|sp|Q2FYG0.1|DER_STAA8 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|166225860|sp|A7X2I1.1|DER_STAA1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|172048892|sp|A6QH24.1|DER_STAAE RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|189037164|sp|A6U1U3.1|DER_STAA2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|189037165|sp|A5IT03.1|DER_STAA9 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|13701274|dbj|BAB42568.1| SA1307 [Staphylococcus aureus subsp. aureus N315]
gi|14247246|dbj|BAB57637.1| GTP-binding protein [Staphylococcus aureus subsp. aureus Mu50]
gi|21204533|dbj|BAB95229.1| MW1364 [Staphylococcus aureus subsp. aureus MW2]
gi|49241791|emb|CAG40482.1| putative GTPase [Staphylococcus aureus subsp. aureus MRSA252]
gi|49244757|emb|CAG43193.1| putative GTPase [Staphylococcus aureus subsp. aureus MSSA476]
gi|57284616|gb|AAW36710.1| GTP-binding protein, Era/TrmE family [Staphylococcus aureus subsp.
aureus COL]
gi|87202767|gb|ABD30577.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|147741028|gb|ABQ49326.1| small GTP-binding protein [Staphylococcus aureus subsp. aureus JH9]
gi|149946475|gb|ABR52411.1| small GTP-binding protein [Staphylococcus aureus subsp. aureus JH1]
gi|150374396|dbj|BAF67656.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus str.
Newman]
gi|156721929|dbj|BAF78346.1| hypothetical protein SAHV_1463 [Staphylococcus aureus subsp. aureus
Mu3]
gi|253724164|gb|EES92893.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253728818|gb|EES97547.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
TCH130]
gi|257271996|gb|EEV04134.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257275039|gb|EEV06526.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 65-1322]
gi|257278956|gb|EEV09575.1| small GTP-binding protein [Staphylococcus aureus subsp. aureus
68-397]
gi|257281680|gb|EEV11817.1| GTP-binding protein engA [Staphylococcus aureus subsp. aureus
E1410]
gi|257284710|gb|EEV14830.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus M876]
gi|257789442|gb|EEV27782.1| ribosome-associated GTPase EngA [Staphylococcus aureus A9781]
gi|257839842|gb|EEV64310.1| small GTP-binding protein [Staphylococcus aureus A9763]
gi|257843563|gb|EEV67970.1| ribosome-associated GTPase EngA [Staphylococcus aureus A9719]
gi|257847251|gb|EEV71257.1| ribosome-associated GTPase EngA [Staphylococcus aureus A9635]
gi|257849971|gb|EEV73929.1| GTP-binding protein engA [Staphylococcus aureus A9299]
gi|257850301|gb|EEV74254.1| GTP-binding protein engA [Staphylococcus aureus A8115]
gi|257853549|gb|EEV76508.1| small GTP-binding protein [Staphylococcus aureus A6300]
gi|257857005|gb|EEV79905.1| GTP-binding protein engA [Staphylococcus aureus A6224]
gi|257861188|gb|EEV84001.1| GTP-binding protein engA [Staphylococcus aureus A5948]
gi|257862956|gb|EEV85720.1| ribosome-associated GTPase EngA [Staphylococcus aureus A5937]
gi|259160485|gb|EEW45509.1| GTP-binding protein EngA [Staphylococcus aureus 930918-3]
gi|259162929|gb|EEW47492.1| GTP-binding protein EngA [Staphylococcus aureus D30]
gi|262075390|gb|ACY11363.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus ED98]
gi|269940966|emb|CBI49350.1| putative GTPase [Staphylococcus aureus subsp. aureus TW20]
gi|282313759|gb|EFB44152.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus C101]
gi|282316998|gb|EFB47372.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus C427]
gi|282322333|gb|EFB52657.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus M899]
gi|282324747|gb|EFB55057.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus WBG10049]
gi|282331113|gb|EFB60627.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282590300|gb|EFB95380.1| ribosome-associated GTPase EngA [Staphylococcus aureus A10102]
gi|282593984|gb|EFB98973.1| ribosome-associated GTPase EngA [Staphylococcus aureus A9765]
gi|282595675|gb|EFC00639.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus C160]
gi|282764969|gb|EFC05094.1| ribosome-associated GTPase EngA [Staphylococcus aureus A8117]
gi|283470686|emb|CAQ49897.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
ST398]
gi|283790388|gb|EFC29205.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus A017934/97]
gi|285817155|gb|ADC37642.1| GTP-binding protein EngA [Staphylococcus aureus 04-02981]
gi|290920405|gb|EFD97469.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus M1015]
gi|291096295|gb|EFE26556.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 58-424]
gi|291467196|gb|EFF09714.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus M809]
gi|294967937|gb|EFG43966.1| ribosome-associated GTPase EngA [Staphylococcus aureus A8819]
gi|295128341|gb|EFG57975.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|296887440|gb|EFH26340.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|297178678|gb|EFH37924.1| ribosome-associated GTPase EngA [Staphylococcus aureus A8796]
gi|298694764|gb|ADI97986.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
ED133]
gi|300886197|gb|EFK81399.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus TCH70]
gi|302751305|gb|ADL65482.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus str.
JKD6008]
gi|304340528|gb|EFM06463.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|312438122|gb|ADQ77193.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus TCH60]
gi|312829865|emb|CBX34707.1| small GTP-binding domain protein [Staphylococcus aureus subsp.
aureus ECT-R 2]
gi|315129191|gb|EFT85186.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
CGS03]
gi|315195372|gb|EFU25759.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
CGS00]
gi|323439522|gb|EGA97243.1| GTP-binding protein EngA [Staphylococcus aureus O11]
gi|323442239|gb|EGA99870.1| GTP-binding protein EngA [Staphylococcus aureus O46]
gi|329314151|gb|AEB88564.1| GTP-binding protein engA [Staphylococcus aureus subsp. aureus
T0131]
gi|329723199|gb|EGG59730.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
21189]
gi|329727642|gb|EGG64098.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
21172]
gi|329731317|gb|EGG67683.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
21193]
gi|334266813|gb|EGL85283.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21305]
gi|334271686|gb|EGL90069.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21310]
gi|334277675|gb|EGL95899.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21318]
gi|341840032|gb|EGS81552.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
21235]
gi|341843683|gb|EGS84905.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
21269]
gi|341845429|gb|EGS86631.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
21266]
gi|341849513|gb|EGS90656.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
21259]
gi|341852610|gb|EGS93497.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
21195]
gi|341855578|gb|EGS96422.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
21200]
gi|341856377|gb|EGS97216.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
21201]
gi|359830498|gb|AEV78476.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus M013]
gi|364522688|gb|AEW65438.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 11819-97]
gi|365164989|gb|EHM56819.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21202]
gi|365173356|gb|EHM63924.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21209]
gi|365173874|gb|EHM64308.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21178]
gi|365237067|gb|EHM77934.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21331]
gi|365239204|gb|EHM80026.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21334]
gi|365241066|gb|EHM81821.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21340]
gi|365245887|gb|EHM86489.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21194]
gi|371973637|gb|EHO90985.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21262]
gi|371974036|gb|EHO91378.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21264]
gi|371976339|gb|EHO93629.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21252]
gi|371979327|gb|EHO96560.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21272]
gi|371983762|gb|EHP00902.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21333]
gi|371983999|gb|EHP01130.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21283]
gi|374363381|gb|AEZ37486.1| GTP-binding protein Der [Staphylococcus aureus subsp. aureus VC40]
gi|374393124|gb|EHQ64439.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21345]
gi|374394380|gb|EHQ65667.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21343]
gi|375014833|gb|EHS08504.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-3]
gi|375020860|gb|EHS14371.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-99]
gi|375023482|gb|EHS16938.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-55]
gi|375030350|gb|EHS23668.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-105]
gi|375036991|gb|EHS30045.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-122]
gi|375368721|gb|EHS72629.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-125]
gi|375370710|gb|EHS74508.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-189]
gi|375372497|gb|EHS76235.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-160]
gi|375376859|gb|EHS80368.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-157]
gi|377697361|gb|EHT21716.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1114]
gi|377703381|gb|EHT27697.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1214]
gi|377704698|gb|EHT29007.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1242]
gi|377705902|gb|EHT30206.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1500]
gi|377710749|gb|EHT34987.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1605]
gi|377714343|gb|EHT38544.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1769]
gi|377714831|gb|EHT39030.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1750]
gi|377717573|gb|EHT41748.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1835]
gi|377722342|gb|EHT46468.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG547]
gi|377723459|gb|EHT47584.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1096]
gi|377725691|gb|EHT49804.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1150]
gi|377730435|gb|EHT54502.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1176]
gi|377731345|gb|EHT55401.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1213]
gi|377735047|gb|EHT59083.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1233]
gi|377738671|gb|EHT62680.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1612]
gi|377742730|gb|EHT66715.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1770]
gi|377743941|gb|EHT67919.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG290]
gi|377744806|gb|EHT68783.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG2018]
gi|377750479|gb|EHT74417.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1267]
gi|377752627|gb|EHT76546.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG149]
gi|377752800|gb|EHT76718.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1524]
gi|377758075|gb|EHT81963.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIGC340D]
gi|377761080|gb|EHT84956.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIGC341D]
gi|377763323|gb|EHT87179.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIGC345D]
gi|377764281|gb|EHT88134.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIGC348]
gi|377770476|gb|EHT94237.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIGC128]
gi|379993743|gb|EIA15188.1| GTP-binding protein [Staphylococcus aureus subsp. aureus DR10]
gi|383361331|gb|EID38705.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-M]
gi|384230466|gb|AFH69713.1| GTP-binding protein [Staphylococcus aureus subsp. aureus 71193]
gi|385196418|emb|CCG16046.1| putative GTPase [Staphylococcus aureus subsp. aureus HO 5096 0412]
gi|387718419|gb|EIK06389.1| GTPase Der [Staphylococcus aureus subsp. aureus VRS3a]
gi|387719829|gb|EIK07760.1| GTPase Der [Staphylococcus aureus subsp. aureus VRS1]
gi|387725430|gb|EIK13046.1| GTPase Der [Staphylococcus aureus subsp. aureus VRS4]
gi|387727392|gb|EIK14908.1| GTP-binding protein engA [Staphylococcus aureus subsp. aureus VRS5]
gi|387730578|gb|EIK17956.1| GTP-binding protein engA [Staphylococcus aureus subsp. aureus VRS6]
gi|387736000|gb|EIK23110.1| GTP-binding protein engA [Staphylococcus aureus subsp. aureus VRS8]
gi|387737029|gb|EIK24110.1| GTPase Der [Staphylococcus aureus subsp. aureus VRS7]
gi|387737275|gb|EIK24349.1| GTP-binding protein engA [Staphylococcus aureus subsp. aureus VRS9]
gi|387744719|gb|EIK31483.1| GTP-binding protein engA [Staphylococcus aureus subsp. aureus
VRS10]
gi|387745387|gb|EIK32145.1| GTP-binding protein engA [Staphylococcus aureus subsp. aureus
VRS11a]
gi|387746974|gb|EIK33691.1| GTP-binding protein engA [Staphylococcus aureus subsp. aureus
VRS11b]
gi|402347211|gb|EJU82257.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
CM05]
gi|404440311|gb|AFR73504.1| putative GTPase [Staphylococcus aureus 08BA02176]
gi|421956721|gb|EKU09050.1| GTP-binding protein EngA [Staphylococcus aureus CN79]
gi|436431020|gb|ELP28374.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus DSM
20231]
gi|436506003|gb|ELP41842.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21282]
gi|443404884|gb|ELS63501.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21236]
gi|443408608|gb|ELS67126.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21196]
gi|445547606|gb|ELY15871.1| ribosome-associated GTPase EngA [Staphylococcus aureus KT/314250]
gi|445563610|gb|ELY19767.1| ribosome-associated GTPase EngA [Staphylococcus aureus KT/Y21]
Length = 436
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 105/193 (54%), Gaps = 34/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y W H+F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTIFNRIVGERVSIVEDTPGVTRDRIYSSGEWLTHDFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I QA AI+E+ VIIF+V+ +
Sbjct: 62 ----------------------------EIGDAPFQTQIRAQAEIAIDEADVIIFMVNVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT +DE +A L K+ K ++LAVNK ++ V +F+SLGF P PIS G
Sbjct: 94 EGLTQSDEMVAQILYKS--KKPVVLAVNKVDNMEMR-TDVYDFYSLGFGEPYPISGSHGL 150
Query: 343 GTGELLDLVCSEL 355
G G+LLD V S
Sbjct: 151 GLGDLLDAVVSHF 163
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 82/162 (50%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R++I+GRPNVGKS+L N ++G +R IV + G TRD + + +++L+DT G+
Sbjct: 177 RLSIIGRPNVGKSSLVNAILGEDRVIVSNVAGTTRDAIDTEYSYDGQDYVLIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ ++D +
Sbjct: 234 -RKKGKVYE---------------STEKYSVLR--------ALKAIERSNVVLVVIDAEQ 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ +A + + K +++ VNK ++ K + +F
Sbjct: 270 GIIEQDKRVAGYAHEQ--GKAVVIVVNKWDTVEKDSKTMKKF 309
>gi|29654548|ref|NP_820240.1| GTP-binding protein EngA [Coxiella burnetii RSA 493]
gi|153208833|ref|ZP_01947057.1| GTP-binding protein EngA [Coxiella burnetii 'MSU Goat Q177']
gi|154706295|ref|YP_001424682.1| GTP-binding protein EngA [Coxiella burnetii Dugway 5J108-111]
gi|161830868|ref|YP_001597096.1| GTP-binding protein EngA [Coxiella burnetii RSA 331]
gi|165921454|ref|ZP_02219642.1| GTP-binding protein EngA [Coxiella burnetii Q321]
gi|212218660|ref|YP_002305447.1| GTP-binding protein EngA [Coxiella burnetii CbuK_Q154]
gi|41017032|sp|Q83C83.1|DER_COXBU RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|189037144|sp|A9KFU3.1|DER_COXBN RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|189037145|sp|A9NDV6.1|DER_COXBR RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|238058971|sp|B6J7Q3.1|DER_COXB1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|29541815|gb|AAO90754.1| GTP-binding protein [Coxiella burnetii RSA 493]
gi|120575684|gb|EAX32308.1| GTP-binding protein EngA [Coxiella burnetii 'MSU Goat Q177']
gi|154355581|gb|ABS77043.1| GTP-binding protein [Coxiella burnetii Dugway 5J108-111]
gi|161762735|gb|ABX78377.1| GTP-binding protein EngA [Coxiella burnetii RSA 331]
gi|165916769|gb|EDR35373.1| GTP-binding protein EngA [Coxiella burnetii Q321]
gi|212012922|gb|ACJ20302.1| GTP-binding protein [Coxiella burnetii CbuK_Q154]
Length = 443
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/195 (43%), Positives = 105/195 (53%), Gaps = 33/195 (16%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP +AIVGRPNVGKS LFN L A+V D PGVTRDR YG + +LVDTGG+
Sbjct: 1 MLPVIAIVGRPNVGKSTLFNYLTKSRAALVADVPGVTRDRQYGETTIDSQRLLLVDTGGL 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
++ T E PLA E Q AI+ES I+FLVD
Sbjct: 61 VD----------------TENKEVAPLA-------------ETQVEQAIDESDCILFLVD 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
+AGL ADE IA+ LRK K I LAVNK + R ++Q S+F+ LGF P I+A S
Sbjct: 92 AKAGLVPADEIIAERLRKK--GKKIFLAVNKADRARAAVVQ-SDFYKLGFGEPYVIAAAS 148
Query: 341 GTGTGELLDLVCSEL 355
G G +L+ V L
Sbjct: 149 GRGVKDLMTQVLENL 163
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 44/206 (21%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++A++GRPNVGKS L NRL+G R IV D+PG TRD +Y + + L+DT G+
Sbjct: 177 KIAMIGRPNVGKSTLINRLLGEERVIVYDQPGTTRDSIYIPFARNDENYTLIDTAGIRRR 236
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+K Q + +E SMI ++ A+ + V+IFL+D +
Sbjct: 237 AKIQ-DYVEKF------------------------SMI--KSLQAMHAADVVIFLLDARQ 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKC--------ESPRKGI---MQVSEFWSLGFSP 333
G+T D + + + + + +I+AVNK ++ R I M +F F
Sbjct: 270 GVTEQDLRLLNRIVEAGVS--LIIAVNKWDGLNIEERDNVRNAIDRRMPFVDFARRYF-- 325
Query: 334 LPISAISGTGTGELLDLVCSELKKVE 359
ISA+ GTG G+L + + ++
Sbjct: 326 --ISALHGTGVGKLFRAIQESYQSIQ 349
>gi|322375706|ref|ZP_08050218.1| ribosome-associated GTPase EngA [Streptococcus sp. C300]
gi|321279414|gb|EFX56455.1| ribosome-associated GTPase EngA [Streptococcus sp. C300]
Length = 436
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/196 (40%), Positives = 108/196 (55%), Gaps = 38/196 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAI 339
+ G+T ADE +A L K + K +ILAVNK ++P R I +F++LG PLPIS++
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMRNDIF---DFYALGLGEPLPISSV 147
Query: 340 SGTGTGELLDLVCSEL 355
G GTG++LD + L
Sbjct: 148 HGIGTGDVLDAIVENL 163
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 71/152 (46%), Gaps = 30/152 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGR-SFWGEHEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + + EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTHFTDTDGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCES 315
G+ D+ IA + + K +I+ VNK ++
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGMIIVVNKWDT 298
>gi|418878324|ref|ZP_13432559.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1165]
gi|418895174|ref|ZP_13449269.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1057]
gi|377694446|gb|EHT18811.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1165]
gi|377694980|gb|EHT19344.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1057]
Length = 436
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 105/193 (54%), Gaps = 34/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y W H+F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTIFNRIVGERVSIVEDTPGVTRDRIYSSGEWLTHDFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I QA AI+E+ VIIF+V+ +
Sbjct: 62 ----------------------------EIGDAPFQTQIRAQAEIAIDEADVIIFMVNVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT +DE +A L K+ K ++LAVNK ++ V +F+SLGF P PIS G
Sbjct: 94 EGLTQSDEMVAQILYKS--KKPVVLAVNKVDNMEMR-TDVYDFYSLGFGEPYPISGSHGL 150
Query: 343 GTGELLDLVCSEL 355
G G+LLD V S
Sbjct: 151 GLGDLLDAVVSHF 163
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 82/162 (50%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R++I+GRPNVGKS+L N ++G +R IV + G TRD + + +++L+DT G+
Sbjct: 177 RLSIIGRPNVGKSSLVNAILGEDRVIVSNVAGTTRDAIDTEYSYDGQDYVLIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ ++D +
Sbjct: 234 -RKKGKVYE---------------STEKYSVLR--------ALKAIERSNVVLVVIDAEQ 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ +A + + K +++ VNK ++ K + +F
Sbjct: 270 GIIEQDKRVAGYAHEQ--GKAVVIVVNKWDTVEKDSKTMKKF 309
>gi|282916742|ref|ZP_06324500.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus D139]
gi|282319229|gb|EFB49581.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus D139]
Length = 436
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 105/193 (54%), Gaps = 34/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y W H+F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTIFNRIVGERVSIVEDTPGVTRDRIYSSGEWLTHDFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I QA AI+E+ VIIF+V+ +
Sbjct: 62 ----------------------------EIGDAPFQTQIRAQAEIAIDEADVIIFMVNVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT +DE +A L K+ K ++LAVNK ++ V +F+SLGF P PIS G
Sbjct: 94 EGLTQSDEMVAQILYKS--KKPVVLAVNKVDNMEMR-TDVYDFYSLGFGEPYPISGSHGL 150
Query: 343 GTGELLDLVCSEL 355
G G+LLD V S
Sbjct: 151 GLGDLLDAVVSHF 163
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 82/162 (50%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R++I+GRPNVGKS+L N ++G +R IV + G TRD + + +++L+DT G+
Sbjct: 177 RLSIIGRPNVGKSSLVNAILGEDRVIVSNVAGTTRDAIDTEYSYEGQDYVLIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ ++D +
Sbjct: 234 -RKKGKVYE---------------STEKYSVLR--------ALKAIERSNVVLVVIDAEQ 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ +A + + K +++ VNK ++ K + +F
Sbjct: 270 GIIEQDKRVAGYAHEQ--GKAVVIVVNKWDTVEKDSKTMKKF 309
>gi|419814980|ref|ZP_14339694.1| GTP-binding protein Der, partial [Streptococcus sp. GMD2S]
gi|404470279|gb|EKA14928.1| GTP-binding protein Der, partial [Streptococcus sp. GMD2S]
Length = 249
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/196 (40%), Positives = 108/196 (55%), Gaps = 38/196 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAI 339
+ G+T ADE +A L K + K +ILAVNK ++P R I +F++LG PLPIS++
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMRNDIF---DFYALGLGEPLPISSV 147
Query: 340 SGTGTGELLDLVCSEL 355
G GTG++LD + L
Sbjct: 148 HGIGTGDVLDAIVENL 163
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGR-SFWGEHEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + + EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTHFTDTDGQEFTMIDTAGMRK 235
Query: 224 VSKSQPN 230
K N
Sbjct: 236 SGKVYEN 242
>gi|379795836|ref|YP_005325834.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
MSHR1132]
gi|356872826|emb|CCE59165.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
MSHR1132]
Length = 436
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 105/193 (54%), Gaps = 34/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y W H+F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTIFNRIVGERVSIVEDTPGVTRDRIYSSGEWLTHDFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I QA AI+E+ VIIF+V+ +
Sbjct: 62 ----------------------------EIGDAPFQTQIRAQAEIAIDEADVIIFMVNVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT +DE +A L K+ K ++LAVNK ++ V +F+SLGF P PIS G
Sbjct: 94 EGLTQSDEMVAQILYKS--KKPVVLAVNKVDNMEMR-TDVYDFYSLGFGEPYPISGSHGL 150
Query: 343 GTGELLDLVCSEL 355
G G+LLD V S
Sbjct: 151 GLGDLLDAVVSHF 163
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 82/162 (50%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R++I+GRPNVGKS+L N ++G +R IV + G TRD + + +++L+DT G+
Sbjct: 177 RLSIIGRPNVGKSSLVNAILGEDRVIVSNVAGTTRDAIDTEYSYDGQDYVLIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ ++D +
Sbjct: 234 -RKKGKVYE---------------STEKYSVLR--------ALKAIERSNVVLVVIDAEQ 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ +A + + K +++ VNK ++ K + +F
Sbjct: 270 GIIEQDKRVAGYAHEQ--GKAVVIVVNKWDTVEKDSKTMKKF 309
>gi|417933697|ref|ZP_12577017.1| ribosome-associated GTPase EngA [Streptococcus mitis bv. 2 str.
F0392]
gi|340770267|gb|EGR92782.1| ribosome-associated GTPase EngA [Streptococcus mitis bv. 2 str.
F0392]
Length = 436
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/196 (40%), Positives = 108/196 (55%), Gaps = 38/196 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAI 339
+ G+T ADE +A L K + K +ILAVNK ++P R I +F++LG PLPIS++
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMRNDIF---DFYALGLGEPLPISSV 147
Query: 340 SGTGTGELLDLVCSEL 355
G GTG++LD + L
Sbjct: 148 HGIGTGDVLDAIVENL 163
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 30/155 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + + EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTHFTDADGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+ D+ IA + + K +I+ VNK ++ K
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGMIIVVNKWDTLEK 301
>gi|451818097|ref|YP_007454298.1| GTP-binding protein EngA [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
gi|451784076|gb|AGF55044.1| GTP-binding protein EngA [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
Length = 438
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/195 (41%), Positives = 109/195 (55%), Gaps = 33/195 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNRL G +IV D PGVTRDR+Y + W + F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNRLAGKRISIVQDTPGVTRDRVYAEAEWLSYNFTMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P +D+ + + RQA AIE + VI+F+VDG+
Sbjct: 62 ----EPE-RDDIIV----------------------KQMRRQANIAIETADVIVFIVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT AD E+A LRK+ K ++L VNK +S ++ EF++LG P+ ISA G
Sbjct: 95 EGLTPADNEVATMLRKS--KKPVVLVVNKVDSLKEE-DNAWEFYNLGIGDPVTISASQGL 151
Query: 343 GTGELLDLVCSELKK 357
G G++LD V K
Sbjct: 152 GLGDMLDKVVEGFDK 166
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 105/220 (47%), Gaps = 42/220 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R+A++G+PNVGKS+L N+L+G +R IV D PG TRD + E +F+L+DT G+
Sbjct: 178 RIAMIGKPNVGKSSLINKLLGEDRVIVSDVPGTTRDAIDSHLETEEGKFILIDTAGLRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK + I E ++ T AAIE + V I ++D
Sbjct: 238 SKVKEEI-ERYSVVRTY--------------------------AAIERADVCILMIDATE 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF-----WSLGF----SPLP 335
G+T DE+I + + M K I++ VNK + K + +F +L F L
Sbjct: 271 GITEQDEKIIGYAHE--MRKAIMVIVNKWDLVEKDDKTLDKFKKELQGNLKFLSYAEYLF 328
Query: 336 ISAISGTGTGELLDLV--CSELKKVEVCIGFL--LICNAI 371
ISA++G T ++L + C + V G L +I AI
Sbjct: 329 ISALTGQRTNKVLHMAKYCYDNYNKRVSTGILNDVISKAI 368
>gi|238852698|ref|ZP_04643108.1| ribosome-associated GTPase EngA [Lactobacillus gasseri 202-4]
gi|282852069|ref|ZP_06261427.1| ribosome-associated GTPase EngA [Lactobacillus gasseri 224-1]
gi|238834844|gb|EEQ27071.1| ribosome-associated GTPase EngA [Lactobacillus gasseri 202-4]
gi|282556829|gb|EFB62433.1| ribosome-associated GTPase EngA [Lactobacillus gasseri 224-1]
Length = 435
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 107/194 (55%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA+VGRPNVGKS +FNR++ AIV D+ GVTRDR+Y R+ W HEF+L+DTGG
Sbjct: 3 LPIVALVGRPNVGKSTIFNRIINSRVAIVEDKAGVTRDRIYARAEWMGHEFILIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I L + E + I+ QA AI+E+ VI+ L D
Sbjct: 61 -----------------------ITLDSGE-----IEEQIKAQAEIAIDEADVIVMLGDV 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+T DE IA L + K IILAVNK ++P + + +F+SLG P+P+S G
Sbjct: 93 TQHMTNMDETIAKMLYRT--KKPIILAVNKADNPEQR-TDIYDFYSLGLGDPIPVSGSHG 149
Query: 342 TGTGELLDLVCSEL 355
TG G+LLD + E
Sbjct: 150 TGMGDLLDAIVGEF 163
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 92/196 (46%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R +++GRPNVGKS+L N ++G R IV + G TRD + ++ +VDT G+
Sbjct: 176 RFSVIGRPNVGKSSLVNAILGEQRVIVSNIEGTTRDAIDTTFTNDGQKYTIVDTAGI--- 232
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E T + +V R A +AIEES + + ++D
Sbjct: 233 -RRRGKVYE---------------KTEKYSVLR--------AISAIEESDITLLVLDAST 268
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSPLP- 335
G+ D+ +A + + +I+ VNK + P+K + EF L ++P+
Sbjct: 269 GIREQDKHVAGYAHD--AGRGVIIVVNKWDLPKKDSTSMKDFEDTIRQEFQYLDYAPIVF 326
Query: 336 ISAISGTGTGELLDLV 351
+SA +G ++L LV
Sbjct: 327 VSAKTGQRVPDILKLV 342
>gi|419781808|ref|ZP_14307622.1| ribosome-associated GTPase EngA [Streptococcus oralis SK610]
gi|383183866|gb|EIC76398.1| ribosome-associated GTPase EngA [Streptococcus oralis SK610]
Length = 436
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/196 (40%), Positives = 108/196 (55%), Gaps = 38/196 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAI 339
+ G+T ADE +A L K + K +ILAVNK ++P R I +F++LG PLPIS++
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMRNDIF---DFYALGLGEPLPISSV 147
Query: 340 SGTGTGELLDLVCSEL 355
G GTG++LD + L
Sbjct: 148 HGIGTGDVLDAIVDNL 163
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 30/155 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGR-SFWGEHEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + + EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTHFTDTDGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+ D+ IA + + K +I+ VNK ++ K
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGMIIVVNKWDTLEK 301
>gi|347534430|ref|YP_004841100.1| GTP-binding protein engA [Lactobacillus sanfranciscensis TMW
1.1304]
gi|345504486|gb|AEN99168.1| GTP-binding protein engA [Lactobacillus sanfranciscensis TMW
1.1304]
Length = 435
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 108/193 (55%), Gaps = 34/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y W H F L+DTGG+
Sbjct: 4 PTVAIVGRPNVGKSTIFNRVAGERISIVEDTPGVTRDRIYSHGEWLGHNFNLIDTGGI-E 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
VS QP I + I QA AI+E+ VIIF+V+G+
Sbjct: 63 VS-DQPFIKQ----------------------------ITAQAEIAIDEADVIIFMVNGK 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE +A L ++ +K ++LAVNK ++ + + +F+SLGF P PIS G
Sbjct: 94 QGITDADERVAQILYRS--NKPVVLAVNKIDN-FESRADIYDFYSLGFGDPYPISGAHGL 150
Query: 343 GTGELLDLVCSEL 355
G G+LLD V
Sbjct: 151 GLGDLLDEVIKNF 163
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 94/196 (47%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R +++GRPNVGKS+L N +G NR IV D G TRD + + EF +VDT G+
Sbjct: 176 RFSLIGRPNVGKSSLVNAFLGDNRVIVSDVAGTTRDAIDSKFVHDGQEFTIVDTAGI--- 232
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E T + +V R A AI+ES V++ +++ +
Sbjct: 233 -RKRGKVYE---------------KTEKYSVMR--------AMKAIDESDVVLVVLNAEE 268
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSPLP- 335
G+ D+ +A + + + +I+ VNK ++ +K +EF L ++P+
Sbjct: 269 GIREQDKRVAGYAHE--AGRGVIIVVNKWDALKKDNHSQQQFEAAIRAEFQYLAYAPIVF 326
Query: 336 ISAISGTGTGELLDLV 351
+SA + +L DL+
Sbjct: 327 VSAKTKQRLSQLPDLI 342
>gi|148380476|ref|YP_001255017.1| GTP-binding protein EngA [Clostridium botulinum A str. ATCC 3502]
gi|153932865|ref|YP_001384700.1| GTP-binding protein EngA [Clostridium botulinum A str. ATCC 19397]
gi|153936714|ref|YP_001388221.1| GTP-binding protein EngA [Clostridium botulinum A str. Hall]
gi|166224327|sp|A7FW89.1|DER_CLOB1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|166224328|sp|A5I4V0.1|DER_CLOBH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|148289960|emb|CAL84073.1| putative GTP-binding protein EngA [Clostridium botulinum A str.
ATCC 3502]
gi|152928909|gb|ABS34409.1| GTP-binding protein [Clostridium botulinum A str. ATCC 19397]
gi|152932628|gb|ABS38127.1| ribosome-associated GTPase EngA [Clostridium botulinum A str. Hall]
Length = 439
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/194 (41%), Positives = 108/194 (55%), Gaps = 33/194 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L G +IV D PGVTRDR+Y + W ++F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAGKRISIVQDTPGVTRDRIYAEAEWLNYKFTMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P ED+ + S + RQA AIE + VIIFLVDG+
Sbjct: 62 ----EPK-SEDIIV----------------------SQMRRQAQIAIEMANVIIFLVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL AD+E+A LRK+ K ++L VNK + K EF++LG P+ IS+
Sbjct: 95 EGLAPADKEVAQMLRKS--KKPVVLVVNKIDK-LKDENNAYEFYNLGIGDPVTISSSQAL 151
Query: 343 GTGELLDLVCSELK 356
G G++LD V K
Sbjct: 152 GLGDMLDRVVEYFK 165
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 91/194 (46%), Gaps = 42/194 (21%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRM--YGRSFWGEHEFMLVDTGGVLN 223
+A +G+PNVGKS+L N+L+G R IV D PG TRD + Y + +G EF L+DT G+
Sbjct: 179 IAFIGKPNVGKSSLINKLLGEERLIVSDIPGTTRDSIDSYVDTDFG--EFTLIDTAGLRR 236
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
SK + I I T A+IE + V I ++D
Sbjct: 237 KSKVKEEIERYSVIRT---------------------------YASIERADVCILMIDAT 269
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF-----WSLGFSP----L 334
G++ D++I + ++K I++ VNK + K + +F +L F P L
Sbjct: 270 EGISEQDQKIIGYAHD--INKAILVIVNKWDLVEKDDKTMDKFKKELKVNLSFMPYAKYL 327
Query: 335 PISAISGTGTGELL 348
ISA +G ++L
Sbjct: 328 FISAKTGQRVVKVL 341
>gi|293365923|ref|ZP_06612626.1| ribosome-associated GTPase EngA [Streptococcus oralis ATCC 35037]
gi|307702327|ref|ZP_07639285.1| small GTP-binding domain protein [Streptococcus oralis ATCC 35037]
gi|315613624|ref|ZP_07888531.1| ribosome-associated GTPase EngA [Streptococcus sanguinis ATCC
49296]
gi|291315601|gb|EFE56051.1| ribosome-associated GTPase EngA [Streptococcus oralis ATCC 35037]
gi|307624130|gb|EFO03109.1| small GTP-binding domain protein [Streptococcus oralis ATCC 35037]
gi|315314315|gb|EFU62360.1| ribosome-associated GTPase EngA [Streptococcus sanguinis ATCC
49296]
Length = 436
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/196 (40%), Positives = 108/196 (55%), Gaps = 38/196 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAI 339
+ G+T ADE +A L K + K +ILAVNK ++P R I +F++LG PLPIS++
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMRNDIF---DFYALGLGEPLPISSV 147
Query: 340 SGTGTGELLDLVCSEL 355
G GTG++LD + L
Sbjct: 148 HGIGTGDVLDAIVENL 163
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 30/155 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGR-SFWGEHEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + + EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTHFTDTDGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+ D+ IA + + K +I+ VNK ++ K
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGMIIVVNKWDTLEK 301
>gi|399890216|ref|ZP_10776093.1| GTP-binding protein Der [Clostridium arbusti SL206]
Length = 438
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/196 (42%), Positives = 109/196 (55%), Gaps = 33/196 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L G AIV D PGVTRDR+Y + W + F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAGKRIAIVEDTPGVTRDRIYAEAEWINNLFTIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P + + VA+M RQA AIE + VI+F+VDG+
Sbjct: 62 ----EPE-------------------SNDIIVAQM----RRQAQMAIETADVIVFIVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT AD E+A LRK+ K I+L VNK + EF++LG P+ ISA G
Sbjct: 95 QGLTDADNEVALMLRKS--RKPIVLVVNKIDKLADE-QNSFEFYNLGIGDPITISASQGL 151
Query: 343 GTGELLDLVCSELKKV 358
G G++LD V K++
Sbjct: 152 GLGDMLDKVVEHFKEI 167
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 99/209 (47%), Gaps = 35/209 (16%)
Query: 155 IGNVPEH-LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEF 213
I N+ E+ ++A+VGRPNVGKS+L NRL+G +R IV D PG TRD + + +F
Sbjct: 167 IHNIDENDEYTKIAVVGRPNVGKSSLINRLLGEDRVIVSDIPGTTRDAVDSYLETDKGKF 226
Query: 214 MLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEES 273
+L+DT G+ SK + I E ++ T+ AAIE S
Sbjct: 227 ILIDTAGLRRKSKVKEEI-ERYSVIRTL--------------------------AAIERS 259
Query: 274 CVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF-----WS 328
V I ++D L+ DE+I + + + K I++ VNK + K + +F +
Sbjct: 260 DVCILILDATEQLSDQDEKIIGYAHE--LSKAIMVIVNKWDLIEKDDKTMDQFKKNIQYK 317
Query: 329 LGFSPLPISAISGTGTGELLDLVCSELKK 357
L F TG+ ++ + E+KK
Sbjct: 318 LSFMAYAQYMFISAKTGQRVNKLLDEVKK 346
>gi|418597205|ref|ZP_13160738.1| ribosome-associated GTPase EngA, partial [Staphylococcus aureus
subsp. aureus 21342]
gi|374395441|gb|EHQ66708.1| ribosome-associated GTPase EngA, partial [Staphylococcus aureus
subsp. aureus 21342]
Length = 366
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 105/193 (54%), Gaps = 34/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y W H+F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTIFNRIVGERVSIVEDTPGVTRDRIYSSGEWLTHDFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I QA AI+E+ VIIF+V+ +
Sbjct: 62 ----------------------------EIGDAPFQTQIRAQAEIAIDEADVIIFMVNVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT +DE +A L K+ K ++LAVNK ++ V +F+SLGF P PIS G
Sbjct: 94 EGLTQSDEMVAQILYKS--KKPVVLAVNKVDNMEMR-TDVYDFYSLGFGEPYPISGSHGL 150
Query: 343 GTGELLDLVCSEL 355
G G+LLD V S
Sbjct: 151 GLGDLLDAVVSHF 163
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 82/162 (50%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R++I+GRPNVGKS+L N ++G +R IV + G TRD + + +++L+DT G+
Sbjct: 177 RLSIIGRPNVGKSSLVNAILGEDRVIVSNVAGTTRDAIDTEYSYDGQDYVLIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ ++D +
Sbjct: 234 -RKKGKVYE---------------STEKYSVLR--------ALKAIERSNVVLVVIDAEQ 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ +A + + K +++ VNK ++ K + +F
Sbjct: 270 GIIEQDKRVAGYAHEQ--GKAVVIVVNKWDTVEKDSKTMKKF 309
>gi|414158910|ref|ZP_11415202.1| GTPase Der [Streptococcus sp. F0441]
gi|410868893|gb|EKS16857.1| GTPase Der [Streptococcus sp. F0441]
Length = 436
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/196 (40%), Positives = 108/196 (55%), Gaps = 38/196 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAI 339
+ G+T ADE +A L K + K +ILAVNK ++P R I +F++LG PLPIS++
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMRNDIF---DFYALGLGEPLPISSV 147
Query: 340 SGTGTGELLDLVCSEL 355
G GTG++LD + L
Sbjct: 148 HGIGTGDVLDAIVENL 163
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 30/155 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + + EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTHFTDADGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+ D+ IA + + K +I+ VNK ++ K
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGMIIVVNKWDTLEK 301
>gi|395216003|ref|ZP_10401131.1| ribosome-associated GTPase EngA [Pontibacter sp. BAB1700]
gi|394455597|gb|EJF10048.1| ribosome-associated GTPase EngA [Pontibacter sp. BAB1700]
Length = 437
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 111/193 (57%), Gaps = 34/193 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+AIVGRPNVGKS LFNRLVG +AI+ +E GVTRDR YG W + ++DTGG ++ S
Sbjct: 6 IAIVGRPNVGKSTLFNRLVGRRQAIMDNESGVTRDRSYGHGDWTGKYYTVIDTGGYVHGS 65
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+D+ EG I +Q AI+E+ VI+F+VD +AG
Sbjct: 66 -------DDI-------FEG---------------EINKQVELAIKEADVILFMVDVEAG 96
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS--PLPISAISGTG 343
LT DEE A+ LR++ DK I + NK ++ + Q+ EF++LG PIS+ SG+G
Sbjct: 97 LTGLDEEFANVLRRS--DKPIYVVANKADTNARA-HQMGEFYALGLGIDIFPISSQSGSG 153
Query: 344 TGELLDLVCSELK 356
TGELLD V K
Sbjct: 154 TGELLDEVVKHFK 166
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 79/168 (47%), Gaps = 29/168 (17%)
Query: 159 PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDT 218
P+ +PR+A++GRPNVGKS+ N L+G R IV D G TRD + R EF++VDT
Sbjct: 173 PDAGIPRLAVLGRPNVGKSSFVNMLLGVERNIVTDIAGTTRDAIDSRYNAFGKEFIIVDT 232
Query: 219 GGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIF 278
G+ SK + ED+ + + ++ A+E++ V I
Sbjct: 233 AGLRRKSK----VSEDIEFYSVM-----------------------RSVRALEDADVCIV 265
Query: 279 LVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
++D G+ + D I KN K I++ VNK + K EF
Sbjct: 266 MLDATRGIESQDVNIISLAEKN--RKGIVILVNKWDLVEKETNTTKEF 311
>gi|306824736|ref|ZP_07458080.1| ribosome-associated GTPase EngA [Streptococcus sp. oral taxon 071
str. 73H25AP]
gi|304432947|gb|EFM35919.1| ribosome-associated GTPase EngA [Streptococcus sp. oral taxon 071
str. 73H25AP]
Length = 436
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/196 (40%), Positives = 108/196 (55%), Gaps = 38/196 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAI 339
+ G+T ADE +A L K + K +ILAVNK ++P R I +F++LG PLPIS++
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMRNDIF---DFYALGLGEPLPISSV 147
Query: 340 SGTGTGELLDLVCSEL 355
G GTG++LD + L
Sbjct: 148 HGIGTGDVLDAIVENL 163
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 30/155 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGR-SFWGEHEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + + EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTHFTDTDGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+ D+ IA + + K +I+ VNK ++ K
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGMIIVVNKWDTLEK 301
>gi|420147300|ref|ZP_14654576.1| GTPase Der (GTP-binding protein EngA) [Lactobacillus gasseri CECT
5714]
gi|398401301|gb|EJN54803.1| GTPase Der (GTP-binding protein EngA) [Lactobacillus gasseri CECT
5714]
Length = 435
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 107/194 (55%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA+VGRPNVGKS +FNR++ AIV D+ GVTRDR+Y R+ W HEF+L+DTGG
Sbjct: 3 LPIVALVGRPNVGKSTIFNRIINSRVAIVEDKAGVTRDRIYARAEWMGHEFILIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I L + E + I+ QA AI+E+ VI+ L D
Sbjct: 61 -----------------------ITLDSGE-----IEEQIKAQAEIAIDEADVIVMLGDV 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+T DE IA L + K IILAVNK ++P + + +F+SLG P+P+S G
Sbjct: 93 TQHMTNMDETIAKMLYRT--KKPIILAVNKADNPEQR-TDIYDFYSLGLGDPIPVSGSHG 149
Query: 342 TGTGELLDLVCSEL 355
TG G+LLD + E
Sbjct: 150 TGMGDLLDAIVGEF 163
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 92/196 (46%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R +++GRPNVGKS+L N ++G R IV + G TRD + ++ +VDT G+
Sbjct: 176 RFSVIGRPNVGKSSLVNAILGEQRVIVSNIEGTTRDAIDTTFTNDGQKYTIVDTAGI--- 232
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E T + +V R A +AIEES + + ++D
Sbjct: 233 -RRRGKVYE---------------KTEKYSVLR--------AISAIEESDITLLVLDAST 268
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSPLP- 335
G+ D+ +A + + +I+ VNK + P+K + EF L ++P+
Sbjct: 269 GIREQDKHVAGYAHD--AGRGVIIVVNKWDLPKKYSTSMKDFEDTIRQEFQYLDYAPIVF 326
Query: 336 ISAISGTGTGELLDLV 351
+SA +G ++L LV
Sbjct: 327 VSAKTGQRVPDILKLV 342
>gi|168182597|ref|ZP_02617261.1| ribosome-associated GTPase EngA [Clostridium botulinum Bf]
gi|237795959|ref|YP_002863511.1| GTP-binding protein EngA [Clostridium botulinum Ba4 str. 657]
gi|259645868|sp|C3L0M1.1|DER_CLOB6 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|182674194|gb|EDT86155.1| ribosome-associated GTPase EngA [Clostridium botulinum Bf]
gi|229263345|gb|ACQ54378.1| ribosome-associated GTPase EngA [Clostridium botulinum Ba4 str.
657]
Length = 439
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/194 (41%), Positives = 108/194 (55%), Gaps = 33/194 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L G +IV D PGVTRDR+Y + W ++F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAGKRISIVQDTPGVTRDRIYAEAEWLNYKFTMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P ED+ + S + RQA AIE + VIIFLVDG+
Sbjct: 62 ----EPE-SEDIIV----------------------SQMRRQAQIAIEMANVIIFLVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL AD+E+A LRK+ K ++L VNK + K EF++LG P+ IS+
Sbjct: 95 EGLAPADKEVAQMLRKS--KKPVVLVVNKIDK-LKDENNAYEFYNLGIGDPVTISSSQAL 151
Query: 343 GTGELLDLVCSELK 356
G G++LD V K
Sbjct: 152 GLGDMLDRVVEHFK 165
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 91/194 (46%), Gaps = 42/194 (21%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRM--YGRSFWGEHEFMLVDTGGVLN 223
+A +G+PNVGKS+L N+L+G R IV D PG TRD + Y + +G EF L+DT G+
Sbjct: 179 IAFIGKPNVGKSSLINKLLGEERLIVSDIPGTTRDSIDSYVNTDFG--EFTLIDTAGLRR 236
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
SK + I I T A+IE + V I ++D
Sbjct: 237 KSKVKEEIERYSVIRT---------------------------YASIERADVCILMIDAT 269
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF-----WSLGFSP----L 334
G++ D++I + ++K I++ VNK + K + +F +L F P L
Sbjct: 270 EGISEQDQKIIGYAHD--INKAILVIVNKWDLVEKDDKTMDKFKKELKVNLSFMPYAKYL 327
Query: 335 PISAISGTGTGELL 348
ISA +G ++L
Sbjct: 328 FISAKTGQRVVKVL 341
>gi|116629548|ref|YP_814720.1| GTP-binding protein EngA [Lactobacillus gasseri ATCC 33323]
gi|116095130|gb|ABJ60282.1| Predicted GTPase [Lactobacillus gasseri ATCC 33323]
Length = 427
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 107/194 (55%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA+VGRPNVGKS +FNR++ AIV D+ GVTRDR+Y R+ W HEF+L+DTGG
Sbjct: 3 LPIVALVGRPNVGKSTIFNRIINSRVAIVEDKAGVTRDRIYARAEWMGHEFILIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I L + E + I+ QA AI+E+ VI+ L D
Sbjct: 61 -----------------------ITLDSGE-----IEEQIKAQAEIAIDEADVIVMLGDV 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+T DE IA L + K IILAVNK ++P + + +F+SLG P+P+S G
Sbjct: 93 TQHMTNMDETIAKMLYRT--KKPIILAVNKADNPEQR-TDIYDFYSLGLGDPIPVSGSHG 149
Query: 342 TGTGELLDLVCSEL 355
TG G+LLD + E
Sbjct: 150 TGMGDLLDAIVGEF 163
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 92/196 (46%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R +++GRPNVGKS+L N ++G R IV + G TRD + ++ +VDT G+
Sbjct: 176 RFSVIGRPNVGKSSLVNAILGEQRVIVSNIEGTTRDAIDTTFTNDGQKYTIVDTAGI--- 232
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E T + +V R A +AIEES + + ++D
Sbjct: 233 -RRRGKVYE---------------KTEKYSVLR--------AISAIEESDITLLVLDAST 268
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSPLP- 335
G+ D+ +A + + +I+ VNK + P+K + EF L ++P+
Sbjct: 269 GIREQDKHVAGYAHD--AGRGVIIVVNKWDLPKKYSTSMKDFEDTIRQEFQYLDYAPIVF 326
Query: 336 ISAISGTGTGELLDLV 351
+SA +G ++L LV
Sbjct: 327 VSAKTGQRVPDILKLV 342
>gi|300361577|ref|ZP_07057754.1| ribosome-associated GTPase EngA [Lactobacillus gasseri JV-V03]
gi|300354196|gb|EFJ70067.1| ribosome-associated GTPase EngA [Lactobacillus gasseri JV-V03]
Length = 435
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 107/194 (55%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA+VGRPNVGKS +FNR++ AIV D+ GVTRDR+Y R+ W HEF+L+DTGG
Sbjct: 3 LPIVALVGRPNVGKSTIFNRIINSRVAIVEDKAGVTRDRIYARAEWMGHEFILIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I L + E + I+ QA AI+E+ VI+ L D
Sbjct: 61 -----------------------ITLDSGE-----IEEQIKAQAEIAIDEADVIVMLGDV 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+T DE IA L + K IILAVNK ++P + + +F+SLG P+P+S G
Sbjct: 93 TQHMTNMDETIAKMLYRT--KKPIILAVNKADNPEQR-TDIYDFYSLGLGDPIPVSGSHG 149
Query: 342 TGTGELLDLVCSEL 355
TG G+LLD + E
Sbjct: 150 TGMGDLLDAIVGEF 163
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 92/196 (46%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R +++GRPNVGKS+L N ++G R IV + G TRD + ++ +VDT G+
Sbjct: 176 RFSVIGRPNVGKSSLVNAILGEQRVIVSNIEGTTRDAIDTTFTNDGQKYTIVDTAGI--- 232
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E T + +V R A +AIEES + + ++D
Sbjct: 233 -RRRGKVYE---------------KTEKYSVLR--------AISAIEESDITLLVLDAST 268
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSPLP- 335
G+ D+ +A + + +I+ VNK + P+K + EF L ++P+
Sbjct: 269 GIREQDKHVAGYAHD--AGRGVIIVVNKWDLPKKDSTSMKDFENTIRQEFQYLDYAPIVF 326
Query: 336 ISAISGTGTGELLDLV 351
+SA +G ++L LV
Sbjct: 327 VSAKTGQRVPDILKLV 342
>gi|374993845|ref|YP_004969344.1| ribosome-associated GTPase EngA [Desulfosporosinus orientis DSM
765]
gi|357212211|gb|AET66829.1| ribosome-associated GTPase EngA [Desulfosporosinus orientis DSM
765]
Length = 443
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 111/197 (56%), Gaps = 31/197 (15%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNR+ GG AIV + PGVTRDR+Y + W +F L+DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNRITGGLVAIVENMPGVTRDRLYRDAEWLGRKFALIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
EG ++ S + RQA A+EE+ V+IF+VD Q
Sbjct: 62 ----------------EFKNEGTAIS----------SQMRRQAEIAMEEADVVIFVVDAQ 95
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
T D+ IA LR++ K ++L NK E ++ Q+ ++ S G P+PISA+ G
Sbjct: 96 ISPTPDDDLIARTLRRS--GKPVLLVANKVEDFKQVEGQLYDYLSFGLGEPIPISAVHGM 153
Query: 343 GTGELLDLVCSELKKVE 359
TG+LLDLV S L +++
Sbjct: 154 NTGDLLDLVISNLPEID 170
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 101/199 (50%), Gaps = 44/199 (22%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHE---FMLVDTGGV 221
R++++GRPNVGKS+L N L+G R IV + PG TRD + F EHE ++L+DT G+
Sbjct: 180 RISVIGRPNVGKSSLVNNLLGKERVIVSNVPGTTRDAI-DTPF--EHEGRHYILIDTAGM 236
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
S+ +EDL T + +V R + A++ S I+ L+D
Sbjct: 237 RRKSR-----IEDL--------------TEQYSVVR--------SLRAVDRSDAILMLID 269
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS--------LGFSP 333
G+T D++IA + K I+L VNK + +K +++F L ++P
Sbjct: 270 AVDGVTEQDKKIAGYAED--AGKAIVLVVNKWDLIQKDEKTINKFEKSIREELGFLQYAP 327
Query: 334 -LPISAISGTGTGELLDLV 351
+ ISA +G ++LDLV
Sbjct: 328 TMFISAKTGQRVNKILDLV 346
>gi|374385579|ref|ZP_09643082.1| ribosome-associated GTPase EngA [Odoribacter laneus YIT 12061]
gi|373225281|gb|EHP47615.1| ribosome-associated GTPase EngA [Odoribacter laneus YIT 12061]
Length = 435
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 105/193 (54%), Gaps = 34/193 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRL+G +AIV +E GVTRDR YG+S W EF ++DTGG VS
Sbjct: 5 VAIVGRPNVGKSTLFNRLIGSRKAIVNEESGVTRDRNYGKSEWNGKEFSVIDTGGY--VS 62
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
S E+ I +Q AIEE+ VI+F+VD + G
Sbjct: 63 NSDDIFEEE---------------------------INKQVLLAIEEADVILFMVDTEIG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP--LPISAISGTG 343
LT D+ A LR + K I L NK ++ + I SEF+ LG + IS+ +G G
Sbjct: 96 LTDLDQNFAKLLRN--IQKPIYLVANKVDTSER-IYDASEFYRLGINSDLFCISSANGFG 152
Query: 344 TGELLDLVCSELK 356
TGELLD + S +
Sbjct: 153 TGELLDKITSHFQ 165
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 29/152 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LPR+ IVGRPNVGKS+ N L+G R IV + G TRD +Y R H+F+LVDT G+
Sbjct: 175 LPRITIVGRPNVGKSSTINALIGEERNIVTEIAGTTRDSLYTRYNRFGHDFLLVDTAGL- 233
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + + ED+ + + ++ AIE+S V + L+D
Sbjct: 234 ---RKKAKVNEDVEFYSVM-----------------------RSVRAIEDSDVCMLLIDA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
G+ A D I + +N K +++ +NK +
Sbjct: 268 TRGMEAQDLNIFHLIERN--RKGVVILINKWD 297
>gi|257791089|ref|YP_003181695.1| small GTP-binding protein [Eggerthella lenta DSM 2243]
gi|317488189|ref|ZP_07946760.1| ribosome-associated GTPase EngA [Eggerthella sp. 1_3_56FAA]
gi|325830789|ref|ZP_08164173.1| ribosome biogenesis GTPase Der [Eggerthella sp. HGA1]
gi|257474986|gb|ACV55306.1| small GTP-binding protein [Eggerthella lenta DSM 2243]
gi|316912694|gb|EFV34232.1| ribosome-associated GTPase EngA [Eggerthella sp. 1_3_56FAA]
gi|325487196|gb|EGC89639.1| ribosome biogenesis GTPase Der [Eggerthella sp. HGA1]
Length = 438
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/199 (41%), Positives = 111/199 (55%), Gaps = 33/199 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA+VGRPNVGKS NR+ + AIV + GVTRDR Y + W +F L+DTGG+
Sbjct: 3 LPIVAVVGRPNVGKSTFVNRIAQADEAIVHEMRGVTRDRSYHEADWNGVDFKLIDTGGI- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D A +I QA A E+ VI+FLVDG
Sbjct: 62 -------EMGDDDAFQGSI---------------------RNQALAGANEADVILFLVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+ A DE +A LRK K + L VNK ++P + + +V EF+ LG P P+SA+ G
Sbjct: 94 KTGVNADDEAVARILRKT--SKPVFLVVNKLDTPNR-MDEVWEFYQLGLGDPWPVSAMHG 150
Query: 342 TGTGELLDLVCSELKKVEV 360
GTG+LLD V +ELKKV++
Sbjct: 151 HGTGDLLDEVVNELKKVDL 169
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 90/207 (43%), Gaps = 41/207 (19%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAI+GRPN GKS+L N+L +R+IV D G TRD + + +VDT G+
Sbjct: 181 VAIIGRPNAGKSSLTNKLTANDRSIVSDVAGTTRDAIDTHIVHDGQRYTIVDTAGL---- 236
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+ + I ED+ + +A AI+ + V + ++D G
Sbjct: 237 RRKSQIDEDVEYYGFV-----------------------RAMRAIDRANVALLVIDSTLG 273
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNK---CESP------RKGIMQVSEFWSLGFSP-LP 335
LT D+ +A + + I+L NK E P R+ I F +G++P +
Sbjct: 274 LTDQDQRVAGFAAERGCAMVIVL--NKWDLIEGPEAKAEIRERIADRLTF--VGYAPVIA 329
Query: 336 ISAISGTGTGELLDLVCSELKKVEVCI 362
ISA++G + D V + + I
Sbjct: 330 ISALTGKKVDRIWDAVNAAYENYSQTI 356
>gi|373456311|ref|ZP_09548078.1| GTP-binding protein engA [Caldithrix abyssi DSM 13497]
gi|371717975|gb|EHO39746.1| GTP-binding protein engA [Caldithrix abyssi DSM 13497]
Length = 438
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/196 (39%), Positives = 113/196 (57%), Gaps = 33/196 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNRL+G +AIV D+PGVTRDR Y W E ++DTGG L
Sbjct: 4 PLVAIVGRPNVGKSTLFNRLIGRRKAIVDDQPGVTRDRNYDTLEWNGQEIGVIDTGGYLP 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ E I LA RE Q A++E+ +I+F+VD +
Sbjct: 64 KTH-----------------EHIDLAVRE------------QVEIAVDEADLILFVVDAK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T DE++A L ++ +K +L VNK +S + ++ +F++LG P+P+SAI+G
Sbjct: 95 TGITDIDEDLASILLQS--NKKTLLVVNKVDSV-EWEYEIGQFYNLGLGEPIPVSAITGK 151
Query: 343 GTGELLDLVCSELKKV 358
+G+LLDL+ ++ V
Sbjct: 152 RSGDLLDLIIEHIRAV 167
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 43/165 (26%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GR NVGKS+ N L+ RAIV D PG TRD + + + +++L+DT G+
Sbjct: 178 KLAIIGRENVGKSSFVNTLLSQPRAIVTDIPGTTRDPIDSFLNYKKRKYLLIDTAGL--- 234
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K + I E++ + + + +++ + V++++VD
Sbjct: 235 -KKRKRIKENVLFYSNV-----------------------RTYKSMQRADVVLYMVDVNE 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSL 329
GLT D I +N+ +KGI+ V W L
Sbjct: 271 GLTHHD----------------ITVLNEAARQQKGIVLVMNKWDL 299
>gi|401684413|ref|ZP_10816292.1| ribosome-associated GTPase EngA [Streptococcus sp. BS35b]
gi|400185657|gb|EJO19883.1| ribosome-associated GTPase EngA [Streptococcus sp. BS35b]
Length = 436
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/196 (40%), Positives = 107/196 (54%), Gaps = 38/196 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIRHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAI 339
+ G+T ADE +A L K + K +ILAVNK ++P R I +F++LG PLPIS++
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMRNDIF---DFYALGLGEPLPISSV 147
Query: 340 SGTGTGELLDLVCSEL 355
G GTG++LD + L
Sbjct: 148 HGIGTGDVLDAIVENL 163
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 30/155 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + + EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTHFTDADGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+ D+ IA + + K +I+ VNK ++ K
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGMIIVVNKWDTLEK 301
>gi|262274783|ref|ZP_06052594.1| GTP-binding protein EngA [Grimontia hollisae CIP 101886]
gi|262221346|gb|EEY72660.1| GTP-binding protein EngA [Grimontia hollisae CIP 101886]
Length = 501
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 104/192 (54%), Gaps = 40/192 (20%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YG++ GEHEF++VDTGG+
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGKALLGEHEFIVVDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
T E +M Q+ AAIEE+ V++F+VD
Sbjct: 61 --------------------------DGTEEGVETKMAE----QSLAAIEEADVVLFMVD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSPL-PIS 337
G+AGLT ADE IA LR F++ VNK + GI +EFW LG + I+
Sbjct: 91 GRAGLTVADEAIAQHLRSRQKKTFLV--VNKVD----GIDPDAASAEFWQLGMEEMYQIA 144
Query: 338 AISGTGTGELLD 349
A G G L+D
Sbjct: 145 AAHGRGVLALID 156
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 101/223 (45%), Gaps = 41/223 (18%)
Query: 135 QDETDDRKDSGKKQKKRK-TTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVD 193
QDE D KD ++ + + N+P + +I+GRPNVGKS L NR++G R +V D
Sbjct: 185 QDEDKDEKDLTEEDAESALERLRNLP----IKFSIIGRPNVGKSTLTNRILGEERVVVYD 240
Query: 194 EPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREA 253
PG TRD +Y E++++DT GV + + E ++ T+
Sbjct: 241 MPGTTRDSIYIPMERDGREYVIIDTAGVRRRKRVNDKV-EKFSVVQTL------------ 287
Query: 254 AVARMPSMIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNK- 312
AIE++ V++ ++D + ++ D + + + I++AVNK
Sbjct: 288 --------------KAIEDANVVLLVIDARENISDQDLSLLGFALN--AGRSIVIAVNKW 331
Query: 313 --CESPRKGIMQVSEFWSLGFSPLP----ISAISGTGTGELLD 349
+S K ++ LGF ISA+ GTG G L +
Sbjct: 332 DGLDSDVKERVKSELDRRLGFVDFARIHFISALHGTGVGHLFE 374
>gi|452126153|ref|ZP_21938736.1| GTP-binding protein Der [Bordetella holmesii F627]
gi|452129521|ref|ZP_21942096.1| GTP-binding protein Der [Bordetella holmesii H558]
gi|451921248|gb|EMD71393.1| GTP-binding protein Der [Bordetella holmesii F627]
gi|451923156|gb|EMD73298.1| GTP-binding protein Der [Bordetella holmesii H558]
Length = 451
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 107/193 (55%), Gaps = 32/193 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFNRL A+V D G+TRDR YG G+ F+++DTGG
Sbjct: 5 PVVALVGRPNVGKSTLFNRLTRSRAALVADYSGLTRDRHYGEGRVGDIPFIVIDTGGFEP 64
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
V+K I+ ++A RQ AI E+ V++FLVD +
Sbjct: 65 VAKD--GILAEMA---------------------------RQTRQAIAEADVVVFLVDAR 95
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
AGL A D EIA LRK+ + ++LAVNK E +G +SEF+ LG P PISA G
Sbjct: 96 AGLNAHDHEIARLLRKSGQQR-VLLAVNKAEGMNEG-KAISEFYELGLGEPHPISAAHGD 153
Query: 343 GTGELLDLVCSEL 355
G G+L+++ +L
Sbjct: 154 GIGDLIEVALQDL 166
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 93/201 (46%), Gaps = 41/201 (20%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
EH + ++AIVGRPNVGKS L N L+G R I D PG TRD + ++ L+DT
Sbjct: 182 EHRI-KLAIVGRPNVGKSTLINTLMGEERVIAFDLPGTTRDAIEIDFERDGRKYTLIDTA 240
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G+ K + E ++ T+ AIE S V++ +
Sbjct: 241 GLRKRGKVFEAV-EKFSVIKTL--------------------------QAIEASNVVLLM 273
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCES----PRKGIMQVSEFWS----LGF 331
+D Q+ ++ D IA ++ + + +++A+NK + R+ I + EF L F
Sbjct: 274 LDAQSEISEQDAHIAGFVLET--GRAVVVAINKWDGLDDEQRERIER--EFQRKLRFLSF 329
Query: 332 SPL-PISAISGTGTGELLDLV 351
+ + ISA+ G G LL V
Sbjct: 330 ARMHTISALKGQGIRPLLKSV 350
>gi|322388795|ref|ZP_08062392.1| ribosome-associated GTPase EngA [Streptococcus infantis ATCC
700779]
gi|419844194|ref|ZP_14367493.1| ribosome-associated GTPase EngA [Streptococcus infantis ATCC
700779]
gi|321140414|gb|EFX35922.1| ribosome-associated GTPase EngA [Streptococcus infantis ATCC
700779]
gi|385702080|gb|EIG39231.1| ribosome-associated GTPase EngA [Streptococcus infantis ATCC
700779]
Length = 436
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 106/194 (54%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ Q A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQTEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K +ILAVNK ++P + +F++LG PLPIS++ G
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGEPLPISSVHG 149
Query: 342 TGTGELLDLVCSEL 355
GTG++LD + L
Sbjct: 150 IGTGDVLDAIVENL 163
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 30/155 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + + EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTHFTDADGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+ D+ IA + + K +I+ VNK ++ K
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGMIIVVNKWDTLEK 301
>gi|254506757|ref|ZP_05118897.1| GTP-binding protein EngA [Vibrio parahaemolyticus 16]
gi|219550338|gb|EED27323.1| GTP-binding protein EngA [Vibrio parahaemolyticus 16]
Length = 494
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/196 (41%), Positives = 113/196 (57%), Gaps = 40/196 (20%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YG++ GEHEF+++DTGG+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+G T E +M +Q+ AAI+E+ V++F+VD
Sbjct: 61 ----------------------DG----TEEGVETKMA----QQSLAAIDEADVVLFMVD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSPL-PIS 337
G+AGLTAADE IA LRK ++K +L VNK + GI +EFW LG + I+
Sbjct: 91 GRAGLTAADEAIAKHLRK--LEKPSMLVVNKVD----GIDADAASAEFWQLGVENMYQIA 144
Query: 338 AISGTGTGELLDLVCS 353
A G G L++L +
Sbjct: 145 AAHGRGVTALIELALN 160
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 101/224 (45%), Gaps = 48/224 (21%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS L NR++G R +V D PG TRD +Y E++L+DT GV
Sbjct: 207 KLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRRR 266
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
++ + E ++ T+ A+E++ V++ ++D +
Sbjct: 267 TRINETV-EKFSVVKTL--------------------------KAVEDANVVLLVIDARE 299
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI-MQVSEFWS------LGFSPLP-- 335
++ D + + + I++AVNK + G+ M V E LGF
Sbjct: 300 NISDQDLSLLGFALN--AGRSIVIAVNKWD----GLDMDVKEHVKKELDRRLGFVDFARI 353
Query: 336 --ISAISGTGTGELLDLVCSELKKVEVCIGFLLICNAITKIFHI 377
ISA+ GTG G L + V K +G + +T+I +
Sbjct: 354 HFISALHGTGVGHLFESVQEAYKSATTRVG----TSVLTRIMKM 393
>gi|448821381|ref|YP_007414543.1| GTPase Der [Lactobacillus plantarum ZJ316]
gi|448274878|gb|AGE39397.1| GTPase Der [Lactobacillus plantarum ZJ316]
Length = 436
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 106/193 (54%), Gaps = 34/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y S W EF L+DTGG
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIAGDRISIVEDTPGVTRDRIYANSEWLGQEFSLIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I +E P + I +QA AI+E+ VII+LV +
Sbjct: 61 -----------------IDIEDAPFIKQ----------ITQQAEIAIDEADVIIYLVSIK 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE +A L ++ +K ++L VNK ++P +V +F+SLGF P PIS G
Sbjct: 94 EGVTDADEHVAQILYRS--NKPVVLGVNKVDNPELR-SEVYDFYSLGFGDPYPISGAHGL 150
Query: 343 GTGELLDLVCSEL 355
G G+LLD V
Sbjct: 151 GLGDLLDAVIKNF 163
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 96/204 (47%), Gaps = 39/204 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
R +++GRPNVGKS++ N L+G +R IV D G TRD + F + F++VDT G+
Sbjct: 176 RFSLIGRPNVGKSSIVNALLGEDRVIVSDVAGTTRDAI-DTKFTDQDGDRFVMVDTAGIR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T +V R A AI+ S V +F+++G
Sbjct: 235 KKGKVYEN-------------------TERYSVMR--------ALKAIDNSDVALFVING 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS------LGFSPLPI 336
+ G+ D+ +A + + K II+ VNK + +K + EF + + S PI
Sbjct: 268 EEGIREQDKRVAGYAHE--AGKGIIIVVNKWDLVKKDNHTMQEFEAYIRDQFVYLSYAPI 325
Query: 337 SAISGTGTGELLDLVCSELKKVEV 360
+S T + L+ + + +KKV +
Sbjct: 326 IFVSAK-TNQRLEQLPALIKKVNM 348
>gi|421227898|ref|ZP_15684600.1| small GTP-binding domain protein [Streptococcus pneumoniae 2072047]
gi|395594182|gb|EJG54422.1| small GTP-binding domain protein [Streptococcus pneumoniae 2072047]
Length = 228
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 107/194 (55%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K +ILAVNK ++P + +F++LG PLPIS++ G
Sbjct: 93 KEGITDADEYVARKLYKTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGEPLPISSVHG 149
Query: 342 TGTGELLDLVCSEL 355
GTG++LD + L
Sbjct: 150 IGTGDVLDAIVENL 163
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRM---YGRSFW 208
+ +++GRPNVGKS+L N ++G +R I G TRD + + R W
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTHFYRYRW 222
>gi|325954552|ref|YP_004238212.1| GTP-binding protein engA [Weeksella virosa DSM 16922]
gi|323437170|gb|ADX67634.1| GTP-binding protein engA [Weeksella virosa DSM 16922]
Length = 435
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/195 (42%), Positives = 107/195 (54%), Gaps = 33/195 (16%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS FNRLV +AIV D GVTRDR YG+S W EF ++DTGG V
Sbjct: 5 VAIVGRPNVGKSTFFNRLVQKRQAIVDDVSGVTRDRHYGKSDWNGVEFTVIDTGGY--VV 62
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
S+ E+ I +Q A++E+ VI+F+VD Q G
Sbjct: 63 GSEDTFEEE---------------------------IRKQVELAVDEANVILFMVDNQVG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGTGT 344
LT D+E++ LRK F L VNK ++ K + EF++LGF + I+AISG+GT
Sbjct: 96 LTDMDKEVSHLLRKAKKKTF--LVVNKVDT-NKNLDDSYEFYTLGFDKIFTIAAISGSGT 152
Query: 345 GELLDLVCSELKKVE 359
G+LLD V + E
Sbjct: 153 GDLLDEVVDSFETKE 167
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 84/185 (45%), Gaps = 35/185 (18%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LPR+AIVGRPN GKS L N L+G R IV D G TRD + H+F+LVDT G+
Sbjct: 175 LPRIAIVGRPNAGKSTLINALLGEERNIVTDVAGTTRDSIETLYNKFGHKFVLVDTAGM- 233
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + + EDL + + +A IEE V + +VDG
Sbjct: 234 ---RKKGKVAEDLEFYSVM-----------------------RAIRTIEECDVCVLVVDG 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSL------GFSPLPI 336
GL A D I +N K +++ VNK + K + +F + F+ +PI
Sbjct: 268 SRGLEAQDLNILYLAERN--RKGVVILVNKWDLVEKQTNTMRDFEKMIKTKIAPFTDVPI 325
Query: 337 SAISG 341
IS
Sbjct: 326 LFISA 330
>gi|221194359|ref|ZP_03567416.1| ribosome-associated GTPase EngA [Atopobium rimae ATCC 49626]
gi|221185263|gb|EEE17653.1| ribosome-associated GTPase EngA [Atopobium rimae ATCC 49626]
Length = 440
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 110/196 (56%), Gaps = 37/196 (18%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS L NRL AIV + GVTRDR Y + W EF L+DTGG+ +
Sbjct: 4 PIVAVVGRPNVGKSTLVNRLAQRREAIVHESRGVTRDRSYHDADWNGREFCLIDTGGIES 63
Query: 224 V-SKSQ--PNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLV 280
V SK Q P+I E QA A EE+ VI+F+V
Sbjct: 64 VKSKDQFAPHIRE-------------------------------QALLACEEADVIVFVV 92
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAI 339
DG+ G+T DEE+A +R++ DK + L VNK +SP + +F++LG PLPISA
Sbjct: 93 DGKTGITDEDEEVARIVRRS--DKPVFLVVNKKDSPETEQDGLWDFYALGVGEPLPISAS 150
Query: 340 SGTGTGELLDLVCSEL 355
G GTG+LLD + +EL
Sbjct: 151 HGIGTGDLLDGIVAEL 166
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 64/131 (48%), Gaps = 27/131 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R+AI+GRPNVGKS+L NRL G R+IV + G TRD + W + LVDT G+
Sbjct: 180 RLAIIGRPNVGKSSLANRLAGKKRSIVSNVAGTTRDAIDTMIMWKDQPICLVDTAGMRQK 239
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK + ED+ + + + A++ + V + ++D
Sbjct: 240 SK----VHEDVEYYSLL-----------------------RGLRAMDRADVCLLVIDATV 272
Query: 285 GLTAADEEIAD 295
G+T D+++A+
Sbjct: 273 GVTEQDQKLAN 283
>gi|421150492|ref|ZP_15610148.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus str.
Newbould 305]
gi|394329882|gb|EJE55984.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus str.
Newbould 305]
Length = 436
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 105/193 (54%), Gaps = 34/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y W H+F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTIFNRIVGERVSIVEDTPGVTRDRIYSSGEWLTHDFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I QA AI+E+ VIIF+V+ +
Sbjct: 62 ----------------------------EIGDAPFQTQIRAQAEIAIDEADVIIFMVNVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT +DE +A L K+ K ++LAVNK ++ V +F+SLGF P PIS G
Sbjct: 94 EGLTQSDEMVAQILYKS--KKPVVLAVNKVDNMEMR-TDVYDFFSLGFGEPYPISGSHGL 150
Query: 343 GTGELLDLVCSEL 355
G G+LLD V S
Sbjct: 151 GLGDLLDAVVSHF 163
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 82/162 (50%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R++I+GRPNVGKS+L N ++G +R IV + G TRD + + +++L+DT G+
Sbjct: 177 RLSIIGRPNVGKSSLVNAILGEDRVIVSNVAGTTRDAIDTEYSYDGQDYVLIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ ++D +
Sbjct: 234 -RKKGKVYE---------------STEKYSVLR--------ALKAIERSNVVLVVIDAEQ 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ +A + + K +++ VNK ++ K + +F
Sbjct: 270 GIIEQDKRVAGYAHEQ--GKAVVIVVNKWDTVEKDSKTMKKF 309
>gi|254556748|ref|YP_003063165.1| GTP-binding protein EngA [Lactobacillus plantarum JDM1]
gi|300767479|ref|ZP_07077391.1| ribosome-associated GTPase EngA [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|308180691|ref|YP_003924819.1| GTP-binding protein EngA [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|380032671|ref|YP_004889662.1| ribosome-associated GTPase [Lactobacillus plantarum WCFS1]
gi|418275431|ref|ZP_12890754.1| ribosome-associated GTPase [Lactobacillus plantarum subsp.
plantarum NC8]
gi|37999659|sp|Q88VZ6.1|DER_LACPL RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|254045675|gb|ACT62468.1| GTP-binding protein EngA [Lactobacillus plantarum JDM1]
gi|300495298|gb|EFK30454.1| ribosome-associated GTPase EngA [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|308046182|gb|ADN98725.1| GTP-binding protein EngA [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|342241914|emb|CCC79148.1| ribosome-associated GTPase [Lactobacillus plantarum WCFS1]
gi|376008982|gb|EHS82311.1| ribosome-associated GTPase [Lactobacillus plantarum subsp.
plantarum NC8]
Length = 436
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 106/193 (54%), Gaps = 34/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y S W EF L+DTGG
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIAGDRISIVEDTPGVTRDRIYANSEWLGQEFSLIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I +E P + I +QA AI+E+ VII+LV +
Sbjct: 61 -----------------IDIEDAPFIKQ----------ITQQAEIAIDEADVIIYLVSIK 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE +A L ++ +K ++L VNK ++P +V +F+SLGF P PIS G
Sbjct: 94 EGVTDADEHVAQILYRS--NKPVVLGVNKVDNPELR-SEVYDFYSLGFGDPYPISGAHGL 150
Query: 343 GTGELLDLVCSEL 355
G G+LLD V
Sbjct: 151 GLGDLLDAVIKNF 163
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 95/202 (47%), Gaps = 39/202 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
R +++GRPNVGKS++ N L+G +R IV D G TRD + F + F++VDT G+
Sbjct: 176 RFSLIGRPNVGKSSIVNALLGEDRVIVSDVAGTTRDAI-DTKFTDQDGDRFVMVDTAGIR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T +V R A AI+ S V +F+++G
Sbjct: 235 KKGKVYEN-------------------TERYSVMR--------ALKAIDNSDVALFVING 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS------LGFSPLPI 336
+ G+ D+ +A + + K II+ VNK + +K + EF + + S PI
Sbjct: 268 EEGIREQDKRVAGYAHE--AGKGIIIVVNKWDLVKKDNHTMQEFEAYIRDQFVYLSYAPI 325
Query: 337 SAISGTGTGELLDLVCSELKKV 358
+S T + L+ + + +KKV
Sbjct: 326 IFVSAK-TNQRLEQLPALIKKV 346
>gi|306829944|ref|ZP_07463131.1| ribosome-associated GTPase EngA [Streptococcus mitis ATCC 6249]
gi|304427955|gb|EFM31048.1| ribosome-associated GTPase EngA [Streptococcus mitis ATCC 6249]
Length = 436
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/196 (41%), Positives = 107/196 (54%), Gaps = 38/196 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRSFSMIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+EE+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMEEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAI 339
+ G+T ADE +A L K K +ILAVNK ++P R I +F++LG PLPIS++
Sbjct: 93 KEGITDADEYVARKLYKTL--KPVILAVNKVDNPEMRNDIF---DFYALGLGEPLPISSV 147
Query: 340 SGTGTGELLDLVCSEL 355
G GTG++LD + L
Sbjct: 148 HGIGTGDVLDAIVENL 163
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 30/155 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + + EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTHFTDADGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+ D+ IA + + K +I+ VNK ++ K
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGMIIVVNKWDTLEK 301
>gi|339624197|ref|ZP_08659986.1| GTP-binding protein Der [Fructobacillus fructosus KCTC 3544]
Length = 436
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 105/193 (54%), Gaps = 34/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFNR+VG AIV D+PGVTRDR+Y R+ W ++F ++DTGG
Sbjct: 4 PVVAVVGRPNVGKSTLFNRIVGERMAIVEDKPGVTRDRLYARAEWLNYDFRVIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ M P T I Q AI+E+ VI+ +V G+
Sbjct: 61 -----------------LEMGNAPFLTE----------IRGQVEVAIDEADVIVMVVSGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLTA D+ +A+ L DK ++LAVNK ++P + +F+SLG P P+S G
Sbjct: 94 EGLTADDQAVANLLYG--ADKPVVLAVNKVDNPEMR-SDIYDFYSLGLGDPYPVSGSHGI 150
Query: 343 GTGELLDLVCSEL 355
G G++LD V
Sbjct: 151 GLGDVLDQVVKNF 163
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 93/199 (46%), Gaps = 39/199 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
R +I+GRPNVGKS++ N ++G +R IV + G TRD + R E EF++VDT G+
Sbjct: 176 RFSIIGRPNVGKSSIVNAILGEDRMIVSNIEGTTRDAIDTRFMTPEGDEFVMVDTAGIRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI++S V++ ++D +
Sbjct: 236 RGKVYEN-------------------TEKYSVMR--------AMKAIDDSEVVLMVLDAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS--------LGFSPLP 335
G+ D +A + K I++ VNK ++ K + +F + L ++P+
Sbjct: 269 TGIRDQDTHVAGYAHD--AGKAIVIVVNKWDAIEKDTHTMQDFENMIRDRFKFLDYAPIV 326
Query: 336 -ISAISGTGTGELLDLVCS 353
+SA + L DL+ S
Sbjct: 327 FVSAKTKQRLDRLPDLILS 345
>gi|152995389|ref|YP_001340224.1| small GTP-binding protein [Marinomonas sp. MWYL1]
gi|189037150|sp|A6VV10.1|DER_MARMS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|150836313|gb|ABR70289.1| small GTP-binding protein [Marinomonas sp. MWYL1]
Length = 445
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 110/192 (57%), Gaps = 34/192 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P +A+VGRPNVGKS LFN+L A+V D PG+TRDR YG GEHEF+++DTGG
Sbjct: 1 MIPVIALVGRPNVGKSTLFNQLTRSRDALVADYPGLTRDRKYGDGKLGEHEFIVIDTGG- 59
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+S + I E +A RQ+ AIEE+ V++FLVD
Sbjct: 60 --ISGDEQGIDEKMA---------------------------RQSLLAIEEADVVLFLVD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAIS 340
G+ GL ADE IA LR++ +K + L VNK + + I +++F+SLGF L PI+A
Sbjct: 91 GRHGLNPADEMIASHLRRS--NKQVSLVVNKTDGINEDIA-LADFYSLGFGELHPIAASH 147
Query: 341 GTGTGELLDLVC 352
G G L+D V
Sbjct: 148 GKGVHVLIDKVM 159
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 93/196 (47%), Gaps = 36/196 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R+ +VGRPNVGKS L NR++G +R +V D PG TRD +Y + E+ L+DT G+
Sbjct: 181 RIGVVGRPNVGKSTLVNRMLGEDRVVVYDMPGTTRDSVYIPYVRNDKEYTLIDTAGIRR- 239
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K +E +I +A AI+++ V+I ++D
Sbjct: 240 RKHVKEAVEKFSIV--------------------------KALQAIQDANVVIVVIDSHE 273
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQ--VSEF-WSLGFSPLP----IS 337
L D + ++ + +I+A+NK + +K + SE LGF P IS
Sbjct: 274 NLVEQDLHMIGYVLD--AGRGVIIAINKWDGLKKDDREHIKSEVERRLGFVPYAKVHYIS 331
Query: 338 AISGTGTGELLDLVCS 353
A+ GTG G+L D + S
Sbjct: 332 ALHGTGVGDLYDTIES 347
>gi|325912018|ref|ZP_08174420.1| ribosome biogenesis GTPase Der [Lactobacillus iners UPII 143-D]
gi|325476203|gb|EGC79367.1| ribosome biogenesis GTPase Der [Lactobacillus iners UPII 143-D]
Length = 435
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 108/194 (55%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA+VGRPNVGKS +FNR++ AIV D+PGVTRDR+Y + W +F+LVDTGG+
Sbjct: 3 LPVVALVGRPNVGKSTIFNRIINSRVAIVEDQPGVTRDRIYANAQWMGKQFVLVDTGGI- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ N++E+ I+ QA AI E+ VI+ L D
Sbjct: 62 ---TFEDNVIEE--------------------------QIKTQAEIAINEADVIVLLSDV 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+T DE IA L K K IILA+NK ++P + + +F+SLG P+P+S G
Sbjct: 93 TGHVTNLDETIAKILYK--AKKPIILAINKADNPEQR-NDIYDFYSLGLGDPIPVSGSHG 149
Query: 342 TGTGELLDLVCSEL 355
TG G+LLD + S+
Sbjct: 150 TGLGDLLDAIVSKF 163
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 91/203 (44%), Gaps = 40/203 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R +I+GRPNVGKS++ N ++G NR IV D G TRD + ++ +VDT G+
Sbjct: 176 RFSIIGRPNVGKSSIVNSILGENRVIVADMEGTTRDAIDTIFEKDGQKYTIVDTAGIRRK 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K + E ++ +I +AIE+S V I ++D
Sbjct: 236 GKVYEKV-EKYSVMRSI--------------------------SAIEQSDVAIIVIDASV 268
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSPLPI 336
G+ D+ IA + K +I+AVNK + P K + EF L ++P+
Sbjct: 269 GIIEQDKHIAGYAHD--AGKGVIIAVNKWDVPSKTTTSMQDFVKVIRQEFQYLDYAPI-- 324
Query: 337 SAISGTGTGELLDLVCSELKKVE 359
TG+ ++ + S +K V+
Sbjct: 325 -VFVSAKTGQRIEDIVSLVKNVK 346
>gi|397905173|ref|ZP_10506044.1| GTP-binding protein EngA [Caloramator australicus RC3]
gi|397161822|emb|CCJ33378.1| GTP-binding protein EngA [Caloramator australicus RC3]
Length = 439
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/197 (41%), Positives = 111/197 (56%), Gaps = 33/197 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+LVG +IV D PGVTRDR+Y W + F LVDTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLVGKRISIVEDTPGVTRDRIYAEVEWLNYRFTLVDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P ED+ + ++RQA AIE + VI+F+VDG+
Sbjct: 62 ----EPE-SEDIIL----------------------KQMKRQAQIAIETADVILFMVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLTA D E+A+ LR+ + K ++L VNK ++ + + EF+SLG P+ ISA
Sbjct: 95 EGLTATDIEVAEMLRR--VKKPVVLVVNKIDNLKLEDNKF-EFYSLGLGEPITISAALSL 151
Query: 343 GTGELLDLVCSELKKVE 359
G G++LD + K E
Sbjct: 152 GIGDMLDEIVKYFKDKE 168
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 99/201 (49%), Gaps = 38/201 (18%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
E L +VAIVG+PNVGKS+L NRL G RAIV D PG TRD + +F+ +DT
Sbjct: 173 EEPLIKVAIVGKPNVGKSSLLNRLTGEERAIVSDIPGTTRDAIDSLVEINGEKFLFIDTA 232
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G+ SK I E++ + I ++ AAI+ + V + +
Sbjct: 233 GIRRKSK----IKEEIEKYSVI-----------------------RSLAAIDRADVCLIM 265
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS--------LGF 331
+D G+T DE+IA + K I++ VNK + K ++E+ + + +
Sbjct: 266 IDATEGVTEQDEKIAGIAHE--AGKGIVIVVNKWDLIEKDDKTMNEYNNKIRTALSFMTY 323
Query: 332 SP-LPISAISGTGTGELLDLV 351
+P + ISA +G +L+DL+
Sbjct: 324 APIIYISAKTGQRVTKLIDLI 344
>gi|399926843|ref|ZP_10784201.1| GTP-binding protein Der [Myroides injenensis M09-0166]
Length = 437
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/191 (42%), Positives = 107/191 (56%), Gaps = 33/191 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS FNRL+ AIV GVTRDR YG+S W EF ++DTGG +
Sbjct: 5 VAIVGRPNVGKSTFFNRLIQRRDAIVDSVSGVTRDRNYGKSEWNGREFSVIDTGGYV--- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
K +I E I RQ + AI+E+ VI+F+VD + G
Sbjct: 62 KGSDDIFE--------------------------GEIRRQVSLAIDEADVIVFVVDVEEG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGTGT 344
+T DEE+A LRK K I +AVNK +S ++ + EF++LG + PI+ ISG+GT
Sbjct: 96 ITPMDEEVARLLRKE--KKPIFVAVNKVDSAKR-MDDCYEFYNLGLGEIFPIAGISGSGT 152
Query: 345 GELLDLVCSEL 355
G+LLD V L
Sbjct: 153 GDLLDAVVQAL 163
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 78/171 (45%), Gaps = 29/171 (16%)
Query: 156 GNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFML 215
G+ E LPR A+VGRPN GKS+ N L+G +R IV D G TRD + R +F L
Sbjct: 170 GDSEEDELPRFAVVGRPNAGKSSFINALIGEDRYIVTDIAGTTRDSIDTRFTQFGFDFNL 229
Query: 216 VDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCV 275
VDT G+ + + + EDL + + ++ AIE S V
Sbjct: 230 VDTAGI----RRKAKVKEDLEFYSVM-----------------------RSIRAIEHSDV 262
Query: 276 IIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
I +VD G + D+ I KN K I++ VNK + K M +F
Sbjct: 263 CILMVDATRGFESQDQNIFWLAEKNR--KGIVILVNKWDLVDKDTMTSKQF 311
>gi|309807087|ref|ZP_07701066.1| ribosome biogenesis GTPase Der [Lactobacillus iners LactinV 03V1-b]
gi|308166517|gb|EFO68717.1| ribosome biogenesis GTPase Der [Lactobacillus iners LactinV 03V1-b]
Length = 431
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 108/194 (55%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA+VGRPNVGKS +FNR++ AIV D+PGVTRDR+Y + W +F+LVDTGG+
Sbjct: 3 LPVVALVGRPNVGKSTIFNRIINSRVAIVEDQPGVTRDRIYANAQWMGKQFVLVDTGGI- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ N++E+ I+ QA AI E+ VI+ L D
Sbjct: 62 ---TFEDNVIEE--------------------------QIKTQAEIAINEADVIVLLSDV 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+T DE IA L K K IILA+NK ++P + + +F+SLG P+P+S G
Sbjct: 93 TGHVTNLDETIAKILYK--AKKPIILAINKADNPEQR-NDIYDFYSLGLGDPIPVSGSHG 149
Query: 342 TGTGELLDLVCSEL 355
TG G+LLD + S+
Sbjct: 150 TGLGDLLDAIVSKF 163
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 91/203 (44%), Gaps = 40/203 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R +I+GRPNVGKS++ N ++G NR IV D G TRD + ++ +VDT G+
Sbjct: 176 RFSIIGRPNVGKSSIVNSILGENRVIVADMEGTTRDAIDTIFEKDGQKYTIVDTAGIRRK 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K + E ++ +I +AIE+S V I ++D
Sbjct: 236 GKVYEKV-EKYSVMRSI--------------------------SAIEQSDVAIIVIDASV 268
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSPLPI 336
G+ D+ IA + K +I+AVNK + P K + EF L ++P+
Sbjct: 269 GIIEQDKHIAGYAHD--AGKGVIIAVNKWDVPSKTTTSMQDFVKVIRQEFQYLDYAPI-- 324
Query: 337 SAISGTGTGELLDLVCSELKKVE 359
TG+ ++ + S +K V+
Sbjct: 325 -VFVSAKTGQRIEDIVSLVKNVK 346
>gi|167747191|ref|ZP_02419318.1| hypothetical protein ANACAC_01905 [Anaerostipes caccae DSM 14662]
gi|317473608|ref|ZP_07932897.1| ribosome-associated GTPase EngA [Anaerostipes sp. 3_2_56FAA]
gi|167654151|gb|EDR98280.1| ribosome biogenesis GTPase Der [Anaerostipes caccae DSM 14662]
gi|316898898|gb|EFV20923.1| ribosome-associated GTPase EngA [Anaerostipes sp. 3_2_56FAA]
Length = 440
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/190 (43%), Positives = 108/190 (56%), Gaps = 32/190 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN L G N +IV D PGVTRDR+Y W + F L+DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNALAGENISIVKDTPGVTRDRIYADISWLNYNFTLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P+ + + ++RM QA AIE + VIIFLVD +
Sbjct: 62 ----EPD-------------------SGDVILSRM----REQAQIAIETADVIIFLVDVR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL AD ++AD LR++ K ++LAVNK ++ K + EF++LG P P+SA S
Sbjct: 95 QGLVDADFQVADMLRRS--QKPVVLAVNKADNYEKFLPDTYEFYNLGLGDPHPVSANSKL 152
Query: 343 GTGELLDLVC 352
G G+LLD V
Sbjct: 153 GFGDLLDEVV 162
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 76/163 (46%), Gaps = 29/163 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P++AI+G+PN GKS++ N+++G R IV D G TRD + E++ +DT G+
Sbjct: 178 PKIAIIGKPNAGKSSIINKMLGEERVIVSDVAGTTRDAIDTVIQKNGKEYVFIDTAGL-- 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ + I EDL + I + +A+E V + ++D
Sbjct: 236 --RRKNKIKEDLERYSVI-----------------------RTVSAVERCDVAVLVIDAT 270
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+T D +IA + K +I+AVNK + K + +F
Sbjct: 271 EGITEQDAKIAGIAHER--GKGMIIAVNKWDLVEKDDKTIYKF 311
>gi|330752592|emb|CBL87538.1| GTP-binding protein [uncultured Flavobacteriia bacterium]
Length = 447
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/199 (42%), Positives = 111/199 (55%), Gaps = 33/199 (16%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS FNR+V AIV + GVTRDR YG+S W F L+DTGG L S
Sbjct: 18 VAIVGRPNVGKSTFFNRMVQKRDAIVDSQSGVTRDRHYGKSDWNGRGFTLIDTGGYLENS 77
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
ED+ I++Q + A+EE+ IIF+VD G
Sbjct: 78 -------EDV----------------------FQKEIDKQVSLAVEEADAIIFIVDVIDG 108
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLP-ISAISGTGT 344
+T D+ IA LR++ K I LA+NK ++ + M SEF+SLG+ IS++SG+GT
Sbjct: 109 VTGMDQNIAKLLRRS--SKPIYLAINKVDNTSRTQM-TSEFYSLGYKNFYCISSVSGSGT 165
Query: 345 GELLDLVCSELKKVEVCIG 363
GELLD + S++ E IG
Sbjct: 166 GELLDDLISQMPDEEKKIG 184
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 68/152 (44%), Gaps = 29/152 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP A+VGRPN GKS+ N ++G R IV G TRD + R +F L+DT G+
Sbjct: 187 LPNFAVVGRPNAGKSSFINAIIGKERNIVTKIAGTTRDSINSRYKRFGFDFNLIDTAGI- 245
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + I ED+ + + ++ +IE + V I +VD
Sbjct: 246 ---RKKTKIKEDIEFYSIM-----------------------RSVRSIEYADVCILIVDA 279
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
G + I WL + +K I++ VNK +
Sbjct: 280 TRGFDGQVQNIF-WL-THRNNKGIVILVNKWD 309
>gi|332523593|ref|ZP_08399845.1| ribosome biogenesis GTPase Der [Streptococcus porcinus str.
Jelinkova 176]
gi|332314857|gb|EGJ27842.1| ribosome biogenesis GTPase Der [Streptococcus porcinus str.
Jelinkova 176]
Length = 436
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/199 (39%), Positives = 110/199 (55%), Gaps = 34/199 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTTGEWLNRKFSLIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V+ A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVN------------------------------APFMEQIKHQAQIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L + + K +ILA+NK ++P + +F+SLG P P+S++ G
Sbjct: 93 KEGVTDADEYVAKMLYRTH--KPVILAINKVDNPEMR-NDIYDFYSLGLGDPYPLSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEV 360
GTG++LD + L EV
Sbjct: 150 IGTGDVLDAIVENLPVEEV 168
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 92/198 (46%), Gaps = 41/198 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
R +++GRPNVGKS+L N ++G +R I G TRD + SF EF ++DT G+
Sbjct: 176 RFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAI-DTSFTDSDGQEFTMIDTAGMR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A AI+ S V++ +++
Sbjct: 235 KSGKIYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVINA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPL 334
+ G+ D+ IA + + K +I+ VNK ++ K VS +F L ++P+
Sbjct: 268 EEGIREYDKRIAGFAHE--AGKGMIIVVNKWDTIAKDNHTVSKWEEDIRDQFQFLSYAPI 325
Query: 335 P-ISAISGTGTGELLDLV 351
+SA++ +L +L+
Sbjct: 326 IFVSALTKQRLNKLPELI 343
>gi|339445293|ref|YP_004711297.1| putative GTPase [Eggerthella sp. YY7918]
gi|338905045|dbj|BAK44896.1| predicted GTPase [Eggerthella sp. YY7918]
Length = 438
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 109/199 (54%), Gaps = 33/199 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA+VGRPNVGKS NR+ + AIV + GVTRDR Y + W EF L+DTGG+
Sbjct: 3 LPIVAVVGRPNVGKSTFVNRIAQADEAIVHEMRGVTRDRSYHNADWNGVEFKLIDTGGI- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D A S I QA A E+ VI+F+VDG
Sbjct: 62 -------EMGDDDA---------------------FQSSIRTQALAGANEADVIVFIVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+ A DEE+A LRK K + L VNK ++P + ++ EF+ LG P P+S++ G
Sbjct: 94 KTGVNADDEEVARILRKTA--KPVFLVVNKLDTPNR-TDELWEFYQLGLGDPWPVSSLHG 150
Query: 342 TGTGELLDLVCSELKKVEV 360
GTG+LLD V EL+ VE+
Sbjct: 151 HGTGDLLDAVVEELRMVEL 169
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 90/215 (41%), Gaps = 57/215 (26%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAI+GRPN GKS+L N++ +R+IV D G TRD
Sbjct: 181 VAIIGRPNAGKSSLTNKMTNNDRSIVSDVAGTTRD------------------------- 215
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIER--------QATAAIEESCVII 277
AI TT+ +G+ + A R S I++ +A AI+ + V +
Sbjct: 216 ----------AIDTTVEHDGVRYTIVDTAGLRRKSQIDQDVEYYGFVRAMRAIDRADVAL 265
Query: 278 FLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNK---CESP------RKGIMQVSEFWS 328
++D GLT D+ +A + + I+L NK E P R+ I F
Sbjct: 266 LVIDSTLGLTDQDQRVAGYAAERGCAMVIVL--NKWDLIEGPEAKADIRERIADRMTF-- 321
Query: 329 LGFSP-LPISAISGTGTGELLDLVCSELKKVEVCI 362
+G++P + ISA++G + + + + + I
Sbjct: 322 VGYAPVIAISALTGKKVDRIWEAINTAYENFSQTI 356
>gi|343521005|ref|ZP_08757973.1| ribosome-associated GTPase EngA [Parvimonas sp. oral taxon 393 str.
F0440]
gi|343396211|gb|EGV08748.1| ribosome-associated GTPase EngA [Parvimonas sp. oral taxon 393 str.
F0440]
Length = 441
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 108/193 (55%), Gaps = 33/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P V +VGRPNVGKS LFN+L+ AI D PGVTRDR+Y + W F+L DTGG+
Sbjct: 4 PLVCVVGRPNVGKSTLFNKLINKRIAITEDTPGVTRDRLYQDAEWQNKHFILCDTGGL-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+PN +D+ + I+ QA A+E + VI+F+VDG+
Sbjct: 62 ----EPN-SDDIIL----------------------QKIKAQADVAMENADVILFVVDGR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLP-ISAISGT 342
GL D EI+++LR+ K IILAVNK ++ K M+V EF+ LG+ L ISA G
Sbjct: 95 NGLMDEDREISNYLRRT--KKPIILAVNKIDT-HKTPMEVYEFYELGYEKLNIISATQGF 151
Query: 343 GTGELLDLVCSEL 355
G G+LLD + E
Sbjct: 152 GLGDLLDEIIKEF 164
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 34/202 (16%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
E + ++A++G+PNVGKS+L NR++G R IV D G TRD + R ++ DT
Sbjct: 173 EDEVTKIALIGKPNVGKSSLMNRILGEERMIVSDIAGTTRDSIDSRVEIDGKTYIFTDTA 232
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G+ + + NI E+L +V R + +ER S + I L
Sbjct: 233 GL----RRKKNITENL---------------ERYSVVRTLNAVER--------SDIAILL 265
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF-----WSLGFSPL 334
+D G+T D ++ + ++ +K +I+AVNK + K F L F P
Sbjct: 266 IDATEGVTEQDTKVIGFAKE--QNKALIIAVNKWDLIVKDNKTYKAFEDDIRTKLSFVPY 323
Query: 335 PISAISGTGTGELLDLVCSELK 356
TG+ +D + +K
Sbjct: 324 AQLVFISVKTGQRIDKLFEAIK 345
>gi|309809326|ref|ZP_07703195.1| ribosome biogenesis GTPase Der [Lactobacillus iners SPIN 2503V10-D]
gi|308170439|gb|EFO72463.1| ribosome biogenesis GTPase Der [Lactobacillus iners SPIN 2503V10-D]
Length = 435
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 108/194 (55%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA+VGRPNVGKS +FNR++ AIV D+PGVTRDR+Y + W +F+LVDTGG+
Sbjct: 3 LPVVALVGRPNVGKSTIFNRIINSRVAIVEDQPGVTRDRIYANAQWMGKQFVLVDTGGI- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ N++E+ I+ QA AI E+ VI+ L D
Sbjct: 62 ---TFEDNVIEE--------------------------QIKTQAEIAINEADVIVMLSDV 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+T DE IA L K K IILA+NK ++P + + +F+SLG P+P+S G
Sbjct: 93 TGHVTNLDETIAKILYK--AKKPIILAINKADNPEQR-NDIYDFYSLGLGDPIPVSGSHG 149
Query: 342 TGTGELLDLVCSEL 355
TG G+LLD + S+
Sbjct: 150 TGLGDLLDAIVSKF 163
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 91/203 (44%), Gaps = 40/203 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R +I+GRPNVGKS++ N ++G NR IV D G TRD + ++ +VDT G+
Sbjct: 176 RFSIIGRPNVGKSSIVNSILGENRVIVADMEGTTRDAIDTIFEKDGQKYTIVDTAGIRRK 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K + E ++ +I +AIE+S V I ++D
Sbjct: 236 GKVYEKV-EKYSVMRSI--------------------------SAIEQSDVAIIVIDASV 268
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSPLPI 336
G+ D+ IA + K +I+AVNK + P K + EF L ++P+
Sbjct: 269 GIIEQDKHIAGYAHD--AGKGVIIAVNKWDVPYKTTTSMQDFVKVIRQEFQYLDYAPI-- 324
Query: 337 SAISGTGTGELLDLVCSELKKVE 359
TG+ ++ + S +K V+
Sbjct: 325 -VFVSAKTGQRIEDIVSLVKNVK 346
>gi|309805732|ref|ZP_07699772.1| ribosome biogenesis GTPase Der [Lactobacillus iners LactinV 09V1-c]
gi|309807723|ref|ZP_07701658.1| ribosome biogenesis GTPase Der [Lactobacillus iners LactinV 01V1-a]
gi|312875513|ref|ZP_07735516.1| ribosome biogenesis GTPase Der [Lactobacillus iners LEAF 2053A-b]
gi|315653509|ref|ZP_07906430.1| ribosome-associated GTPase EngA [Lactobacillus iners ATCC 55195]
gi|308164985|gb|EFO67228.1| ribosome biogenesis GTPase Der [Lactobacillus iners LactinV 09V1-c]
gi|308169034|gb|EFO71117.1| ribosome biogenesis GTPase Der [Lactobacillus iners LactinV 01V1-a]
gi|311089024|gb|EFQ47465.1| ribosome biogenesis GTPase Der [Lactobacillus iners LEAF 2053A-b]
gi|315489200|gb|EFU78841.1| ribosome-associated GTPase EngA [Lactobacillus iners ATCC 55195]
Length = 435
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 108/194 (55%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA+VGRPNVGKS +FNR++ AIV D+PGVTRDR+Y + W +F+LVDTGG+
Sbjct: 3 LPVVALVGRPNVGKSTIFNRIINSRVAIVEDQPGVTRDRIYANAQWMGKQFVLVDTGGI- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ N++E+ I+ QA AI E+ VI+ L D
Sbjct: 62 ---TFEDNVIEE--------------------------QIKTQAEIAINEADVIVMLSDV 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+T DE IA L K K IILA+NK ++P + + +F+SLG P+P+S G
Sbjct: 93 TGHVTNLDETIAKILYK--AKKPIILAINKADNPEQR-NDIYDFYSLGLGDPIPVSGSHG 149
Query: 342 TGTGELLDLVCSEL 355
TG G+LLD + S+
Sbjct: 150 TGLGDLLDAIVSKF 163
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 91/203 (44%), Gaps = 40/203 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R +I+GRPNVGKS++ N ++G NR IV D G TRD + ++ +VDT G+
Sbjct: 176 RFSIIGRPNVGKSSIVNSILGENRVIVADMEGTTRDAIDTIFEKDGQKYTIVDTAGIRRK 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K + E ++ +I +AIE+S V I ++D
Sbjct: 236 GKVYEKV-EKYSVMRSI--------------------------SAIEQSDVAIIVIDASV 268
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSPLPI 336
G+ D+ IA + K +I+AVNK + P K + EF L ++P+
Sbjct: 269 GIIEQDKHIAGYAHD--AGKGVIIAVNKWDVPSKTTTSMQDFVKVIRQEFQYLDYAPI-- 324
Query: 337 SAISGTGTGELLDLVCSELKKVE 359
TG+ ++ + S +K V+
Sbjct: 325 -VFVSAKTGQRIEDIVSLVKNVK 346
>gi|261212137|ref|ZP_05926423.1| GTP-binding protein EngA [Vibrio sp. RC341]
gi|260838745|gb|EEX65396.1| GTP-binding protein EngA [Vibrio sp. RC341]
Length = 494
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 109/192 (56%), Gaps = 40/192 (20%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YG++ GEHEF+++DTGG+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
S+ + +A +Q+ AAI+E+ V++F+VD
Sbjct: 61 ---DGSEEGVETKMA---------------------------QQSLAAIDEADVVLFMVD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSPL-PIS 337
G+AGLT ADE IA LR+ ++K IL VNK + GI +EFW LG + I+
Sbjct: 91 GRAGLTVADEAIAQHLRR--IEKPAILVVNKVD----GIDADAASAEFWQLGMDQMYQIA 144
Query: 338 AISGTGTGELLD 349
G G G L+D
Sbjct: 145 TAHGRGVGALID 156
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 100/223 (44%), Gaps = 46/223 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS L NR++G R +V D PG TRD +Y E E++L+DT GV
Sbjct: 207 KLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMKRDEREYVLIDTAGVRRR 266
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + E ++ T+ AIE++ V++ +VD +
Sbjct: 267 KRINETV-EKFSVVKTL--------------------------QAIEDANVVLLVVDARE 299
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS------LGFSPLP--- 335
++ D + + + + I++AVNK + + V E LGF
Sbjct: 300 NISDQDLSLLGFALNS--GRSIVIAVNKWDGLS---IDVKEHVKKELDRRLGFVDFARIH 354
Query: 336 -ISAISGTGTGELLDLVCSELKKVEVCIGFLLICNAITKIFHI 377
ISA+ GTG G L + V + +G + +T+I +
Sbjct: 355 FISALHGTGVGHLFESVQEAYRSATTRVG----TSVLTRIMKM 393
>gi|302191345|ref|ZP_07267599.1| GTP-binding protein EngA [Lactobacillus iners AB-1]
gi|309804160|ref|ZP_07698238.1| ribosome biogenesis GTPase Der [Lactobacillus iners LactinV 11V1-d]
gi|312872309|ref|ZP_07732379.1| ribosome biogenesis GTPase Der [Lactobacillus iners LEAF 2062A-h1]
gi|312873983|ref|ZP_07734019.1| ribosome biogenesis GTPase Der [Lactobacillus iners LEAF 2052A-d]
gi|325912827|ref|ZP_08175205.1| ribosome biogenesis GTPase Der [Lactobacillus iners UPII 60-B]
gi|329921288|ref|ZP_08277726.1| ribosome biogenesis GTPase Der [Lactobacillus iners SPIN 1401G]
gi|349611403|ref|ZP_08890639.1| GTP-binding protein engA [Lactobacillus sp. 7_1_47FAA]
gi|308163743|gb|EFO66012.1| ribosome biogenesis GTPase Der [Lactobacillus iners LactinV 11V1-d]
gi|311090532|gb|EFQ48940.1| ribosome biogenesis GTPase Der [Lactobacillus iners LEAF 2052A-d]
gi|311092132|gb|EFQ50506.1| ribosome biogenesis GTPase Der [Lactobacillus iners LEAF 2062A-h1]
gi|325477820|gb|EGC80954.1| ribosome biogenesis GTPase Der [Lactobacillus iners UPII 60-B]
gi|328934580|gb|EGG31084.1| ribosome biogenesis GTPase Der [Lactobacillus iners SPIN 1401G]
gi|348608725|gb|EGY58695.1| GTP-binding protein engA [Lactobacillus sp. 7_1_47FAA]
Length = 435
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 108/194 (55%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA+VGRPNVGKS +FNR++ AIV D+PGVTRDR+Y + W +F+LVDTGG+
Sbjct: 3 LPVVALVGRPNVGKSTIFNRIINSRVAIVEDQPGVTRDRIYANAQWMGKQFVLVDTGGI- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ N++E+ I+ QA AI E+ VI+ L D
Sbjct: 62 ---TFEDNVIEE--------------------------QIKTQAEIAINEADVIVMLSDV 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+T DE IA L K K IILA+NK ++P + + +F+SLG P+P+S G
Sbjct: 93 TGHVTNLDETIAKILYK--AKKPIILAINKADNPEQR-NDIYDFYSLGLGDPIPVSGSHG 149
Query: 342 TGTGELLDLVCSEL 355
TG G+LLD + S+
Sbjct: 150 TGLGDLLDAIVSKF 163
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 91/203 (44%), Gaps = 40/203 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R +I+GRPNVGKS++ N ++G NR IV D G TRD + ++ +VDT G+
Sbjct: 176 RFSIIGRPNVGKSSIVNSILGENRVIVADMEGTTRDAIDTIFEKDGQKYTIVDTAGIRRK 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K + E ++ +I +AIE+S V I ++D
Sbjct: 236 GKVYEKV-EKYSVMRSI--------------------------SAIEQSDVAIIVIDASV 268
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSPLPI 336
G+ D+ IA + K +I+AVNK + P K + EF L ++P+
Sbjct: 269 GIIEQDKHIAGYAHD--AGKGVIIAVNKWDVPSKTTTSMQDFVKVIRQEFQYLDYAPI-- 324
Query: 337 SAISGTGTGELLDLVCSELKKVE 359
TG+ ++ + S +K V+
Sbjct: 325 -VFVSAKTGQRIEDIVSLVKNVK 346
>gi|343503632|ref|ZP_08741442.1| GTP-binding protein EngA [Vibrio ichthyoenteri ATCC 700023]
gi|342814424|gb|EGU49368.1| GTP-binding protein EngA [Vibrio ichthyoenteri ATCC 700023]
Length = 497
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 113/196 (57%), Gaps = 40/196 (20%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YG++ GEH+F+++DTGG+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHDFIVIDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
S+ + +A +Q+ AAI+E+ V++FLVD
Sbjct: 61 ---DGSEEGVETKMA---------------------------QQSLAAIDEADVVLFLVD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSPL-PIS 337
G+AGLT AD+ IA LRK ++K +L VNK + GI ++FW LG + I+
Sbjct: 91 GRAGLTPADQAIATHLRK--IEKPAMLVVNKVD----GIDPDAASADFWQLGMGDMYQIA 144
Query: 338 AISGTGTGELLDLVCS 353
A G G G+L+DL +
Sbjct: 145 AAHGRGVGQLIDLALN 160
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 95/206 (46%), Gaps = 36/206 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS L NR++G R +V D PG TRD +Y E++L+DT G+
Sbjct: 210 KMAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGI--- 266
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + NI E + + + + AIE++ V++ ++D +
Sbjct: 267 -RRRKNINETVEKFSVV-----------------------KTLKAIEDANVVLLVIDARE 302
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIM-QVSEFWS--LGFSPLP----IS 337
++ D + + + + I+LAVNK + + QV + LGF IS
Sbjct: 303 NISDQDLSLLGFALNS--GRSIVLAVNKWDGLNNDVKEQVKKELDRRLGFVDFARIHFIS 360
Query: 338 AISGTGTGELLDLVCSELKKVEVCIG 363
A+ GTG G L + V +G
Sbjct: 361 ALHGTGVGHLFESVQEAYNSATTRVG 386
>gi|312871411|ref|ZP_07731506.1| ribosome biogenesis GTPase Der [Lactobacillus iners LEAF 3008A-a]
gi|311093064|gb|EFQ51413.1| ribosome biogenesis GTPase Der [Lactobacillus iners LEAF 3008A-a]
Length = 435
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 108/194 (55%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA+VGRPNVGKS +FNR++ AIV D+PGVTRDR+Y + W +F+LVDTGG+
Sbjct: 3 LPVVALVGRPNVGKSTIFNRIINSRVAIVEDQPGVTRDRIYANAQWMGKQFVLVDTGGI- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ N++E+ I+ QA AI E+ VI+ L D
Sbjct: 62 ---TFEDNVIEE--------------------------QIKTQAEIAINEADVIVMLSDV 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+T DE IA L K K IILA+NK ++P + + +F+SLG P+P+S G
Sbjct: 93 TGHVTNLDETIAKILYK--AKKPIILAINKADNPEQR-NDIYDFYSLGLGDPIPVSGSHG 149
Query: 342 TGTGELLDLVCSEL 355
TG G+LLD + S+
Sbjct: 150 TGLGDLLDAIVSKF 163
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 40/203 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R +I+GRPNVGKS++ N ++G NR IV + G TRD + ++ +VDT G+
Sbjct: 176 RFSIIGRPNVGKSSIVNSILGENRVIVAEMEGTTRDAIDTIFEKDGQKYTIVDTAGIRRK 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K + E ++ +I +AIE+S V I ++D
Sbjct: 236 GKVYEKV-EKYSVMRSI--------------------------SAIEQSDVAIIVIDASV 268
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSPLPI 336
G+ D+ IA + K +I+AVNK + P K + EF L ++P+
Sbjct: 269 GIIEQDKHIAGYAHD--AGKGVIIAVNKWDVPSKTTTSMQDFVKVIRQEFQYLDYAPI-- 324
Query: 337 SAISGTGTGELLDLVCSELKKVE 359
TG+ ++ + S +K V+
Sbjct: 325 -VFVSAKTGQRIEDIVSLVKNVK 346
>gi|357235868|ref|ZP_09123211.1| ribosome-associated GTPase EngA [Streptococcus criceti HS-6]
gi|356883850|gb|EHI74050.1| ribosome-associated GTPase EngA [Streptococcus criceti HS-6]
Length = 436
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 108/194 (55%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y ++ W +F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTKAEWLNRQFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ ES VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTESDVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L + + K +ILAVNK ++P + +F++LG P P+S++ G
Sbjct: 93 KEGVTDADEYVAKILYRTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGDPYPLSSVHG 149
Query: 342 TGTGELLDLVCSEL 355
GTG++LD + L
Sbjct: 150 IGTGDILDAIVESL 163
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 30/155 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G R I G TRD + E E+ ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAMLGEERVIASPVAGTTRDAIDTDFVDDEGQEYTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + ++ R + AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSIMR--------SMRAIDRSDVVLMVINAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+ D+ IA + + K II+ VNK ++ +K
Sbjct: 269 EGIRDYDKRIAGFAHE--AGKGIIIVVNKWDTIKK 301
>gi|385826004|ref|YP_005862346.1| putative GTP-binding protein EngA [Lactobacillus johnsonii DPC
6026]
gi|329667448|gb|AEB93396.1| putative GTP-binding protein EngA [Lactobacillus johnsonii DPC
6026]
Length = 435
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 107/194 (55%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA+VGRPNVGKS +FNR++ AIV D+ GVTRDR+Y R+ W HEF+L+DTGG
Sbjct: 3 LPVVALVGRPNVGKSTIFNRIINSRVAIVEDKAGVTRDRIYARAEWMGHEFILIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I L + E + I+ QA AI+E+ VI+ L D
Sbjct: 61 -----------------------ITLDSGE-----IEEQIKAQAEIAIDEADVIVMLGDV 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+T DE IA L + K +ILA+NK ++P + + +F+SLG P+P+S G
Sbjct: 93 TQHMTNMDETIAKMLYRT--KKPVILAINKADNPEQR-TDIYDFYSLGLGDPIPVSGSHG 149
Query: 342 TGTGELLDLVCSEL 355
TG G+LLD + E
Sbjct: 150 TGMGDLLDAIVGEF 163
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 92/196 (46%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R +++GRPNVGKS+L N ++G R IV + G TRD + ++ +VDT G+
Sbjct: 176 RFSVIGRPNVGKSSLVNAILGEQRVIVSNIEGTTRDAIDTTFTNDGQKYTIVDTAGI--- 232
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E T + +V R A +AIEES + + ++D
Sbjct: 233 -RRRGKVYE---------------KTEKYSVLR--------AISAIEESDITLLVLDAST 268
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPLP- 335
G+ D+ +A + + +I+ VNK + P+K + EF L ++P+
Sbjct: 269 GIREQDKHVAGYAHD--AGRGVIIVVNKWDLPKKDSRSMKDFEDTIRREFQYLDYAPIIF 326
Query: 336 ISAISGTGTGELLDLV 351
+SA +G ++L LV
Sbjct: 327 VSAKTGQRVPDILKLV 342
>gi|406659551|ref|ZP_11067689.1| ribosome-associated GTPase EngA [Streptococcus iniae 9117]
gi|405577660|gb|EKB51808.1| ribosome-associated GTPase EngA [Streptococcus iniae 9117]
Length = 436
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/201 (39%), Positives = 111/201 (55%), Gaps = 35/201 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 2 VLPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTTGEWLNRKFSLIDTGGI 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+V A I+ QA A+EE+ VI+F+V
Sbjct: 62 DDVD------------------------------APFMEQIKHQAQIAMEEADVIVFVVS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE ++ L + +K +ILAVNK ++P + +F+SLG P P+S++
Sbjct: 92 GKEGITDADEYVSRILYRT--NKPVILAVNKVDNPEMR-NDIYDFYSLGLGEPFPVSSVH 148
Query: 341 GTGTGELLDLVCSELKKVEVC 361
G GTG++LD + L VEV
Sbjct: 149 GIGTGDVLDAIVENL-PVEVA 168
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 92/198 (46%), Gaps = 41/198 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
R +++GRPNVGKS+L N ++G +R I G TRD + +F E+ ++DT G+
Sbjct: 176 RFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAI-DTNFTDADGQEYTMIDTAGMR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A AI+ S V++ +++
Sbjct: 235 KSGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLLVINA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPL 334
+ G+ D+ IA + + K +I+ VNK ++ K VS +F L ++P+
Sbjct: 268 EEGIREYDKRIAGFAHE--AGKGMIIVVNKWDTLEKDNHTVSNWEADIRDQFQFLAYAPI 325
Query: 335 P-ISAISGTGTGELLDLV 351
+SA++ +L +++
Sbjct: 326 IFVSAVTKQRLNKLPEMI 343
>gi|418318769|ref|ZP_12930162.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21232]
gi|365242111|gb|EHM82833.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21232]
Length = 436
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 105/193 (54%), Gaps = 34/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y W H+F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTIFNRIVGERVSIVEDTPGVTRDRIYSSGEWLTHDFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I Q+ AI+E+ VIIF+V+ +
Sbjct: 62 ----------------------------EIGDAPFQTQIRAQSEIAIDEADVIIFMVNVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT +DE +A L K+ K ++LAVNK ++ V +F+SLGF P PIS G
Sbjct: 94 EGLTQSDEMVAQILYKS--KKPVVLAVNKVDNMEMR-TDVYDFYSLGFGEPYPISGSHGL 150
Query: 343 GTGELLDLVCSEL 355
G G+LLD V S
Sbjct: 151 GLGDLLDAVVSHF 163
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 82/162 (50%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R++I+GRPNVGKS+L N ++G +R IV + G TRD + + +++L+DT G+
Sbjct: 177 RLSIIGRPNVGKSSLVNAILGEDRVIVSNVAGTTRDAIDTEYSYDGQDYVLIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ ++D +
Sbjct: 234 -RKKGKVYE---------------STEKYSVLR--------ALKAIERSNVVLVVIDAEQ 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ +A + + K +++ VNK ++ K + +F
Sbjct: 270 GIIEQDKRVAGYAHEQ--GKAVVIVVNKWDTVEKDSKTMKKF 309
>gi|121535817|ref|ZP_01667617.1| small GTP-binding protein [Thermosinus carboxydivorans Nor1]
gi|121305589|gb|EAX46531.1| small GTP-binding protein [Thermosinus carboxydivorans Nor1]
Length = 440
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 88/197 (44%), Positives = 110/197 (55%), Gaps = 33/197 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN + +IV D PGVTRDR+Y + W EF ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNFIAKKRVSIVEDLPGVTRDRIYMDAEWLGREFTMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I TT + I ATR QA AIEE+ VIIF+VDG+
Sbjct: 62 ------------EIETT---DRILAATRH------------QAQLAIEEADVIIFVVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADEE+A LR K ++LAVNK +SP K V EF++LG P+ ISA +
Sbjct: 95 TGITTADEEVAAMLRSTR--KPVVLAVNKIDSP-KDEPAVYEFYNLGLGDPIAISATNAL 151
Query: 343 GTGELLDLVCSELKKVE 359
G+LLD V L + E
Sbjct: 152 SIGDLLDRVIELLPQTE 168
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 75/151 (49%), Gaps = 31/151 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VA +GRPNVGKS+L N L+G R IV D PG TRD + +F+L+DT G+
Sbjct: 178 KVAFIGRPNVGKSSLVNALLGEERVIVSDIPGTTRDAIDTYFEKDGTKFILIDTAGMRRK 237
Query: 225 SK-SQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
++ +QP V R + ++ A+E + V++ ++D
Sbjct: 238 ARINQP-------------------------VERYSVI---RSLRAVERADVVLVVIDAV 269
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
G+T D++IA + + + II+ VNK +
Sbjct: 270 DGVTEQDKKIAGYAHE--AGRGIIIVVNKWD 298
>gi|408501012|ref|YP_006864931.1| ribosome-associated GTPase EngA [Bifidobacterium asteroides
PRL2011]
gi|408465836|gb|AFU71365.1| ribosome-associated GTPase EngA [Bifidobacterium asteroides
PRL2011]
Length = 702
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/201 (40%), Positives = 103/201 (51%), Gaps = 34/201 (16%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+A+VGRPNVGKS L NR++G A+V D PGVTRDR+ + W +F LVDTGG
Sbjct: 268 LAVVGRPNVGKSTLVNRILGRRAAVVEDTPGVTRDRVSYEAEWAGTQFKLVDTGGW---- 323
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
E+ V + S I QA A+ + +I +VDGQ G
Sbjct: 324 --------------------------ESDVEGIESAIASQAQVAVSLADAVILVVDGQVG 357
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
LTA+DE I LR K ++LAVNK + R SEFW LG P ISA+ G G
Sbjct: 358 LTASDERIVTMLRA--AGKPVVLAVNKLDD-RMADYTASEFWKLGLGEPYAISAMHGRGI 414
Query: 345 GELLDLVCSELKKVEVCIGFL 365
G+LLD +L K E GFL
Sbjct: 415 GDLLDAALEQLSKAEKTSGFL 435
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 149 KKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFW 208
K KT+ PE L RVA+VGRPNVGKS+L N+L RA+V D G TRD +
Sbjct: 427 KAEKTSGFLTPEGL-RRVALVGRPNVGKSSLLNQLAHEERAVVHDVAGTTRDPVDEVVQV 485
Query: 209 GEHEFMLVDTGGV 221
+++ +DT G+
Sbjct: 486 DGEDWLFIDTAGI 498
>gi|259503207|ref|ZP_05746109.1| ribosome-associated GTPase EngA [Lactobacillus antri DSM 16041]
gi|259168864|gb|EEW53359.1| ribosome-associated GTPase EngA [Lactobacillus antri DSM 16041]
Length = 437
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 109/193 (56%), Gaps = 34/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNR+ G +IV D PGVTRDR+Y W F ++DTGG
Sbjct: 4 PVVAIVGRPNVGKSTLFNRIAGERISIVEDTPGVTRDRIYAHGEWLGKNFNMIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I + PL T+ I +QA AI+E+ VI+ +VD +
Sbjct: 61 -----------------IELSDQPLLTQ----------IRQQAEIAIDEADVIVLVVDVE 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
+G+T ADE++A L ++ +K ++LAVNK ++P + V +F+SLG P P+S++ G
Sbjct: 94 SGVTDADEQVARILYRS--NKPVVLAVNKVDNPERR-NDVYDFYSLGLGEPYPVSSVHGV 150
Query: 343 GTGELLDLVCSEL 355
G G+LLD V
Sbjct: 151 GLGDLLDAVIHHF 163
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 77/152 (50%), Gaps = 30/152 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
R +++GRPNVGKS+L N ++G NR IV + G TRD + R + EF ++DT G+
Sbjct: 176 RFSLIGRPNVGKSSLVNGILGENRVIVSNMAGTTRDAINTRFVAPDGQEFTMIDTAGI-- 233
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ Q I E+ T A+ R A AI++S V++ +++ +
Sbjct: 234 --RKQGKIYEN---------------TERYALMR--------AMRAIDDSDVVLVVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCES 315
G+ D+ IA + + +I+AVNK ++
Sbjct: 269 EGIREIDKHIAGYAHEAGCG--VIIAVNKWDT 298
>gi|357059986|ref|ZP_09120760.1| GTP-binding protein engA [Alloprevotella rava F0323]
gi|355376876|gb|EHG24116.1| GTP-binding protein engA [Alloprevotella rava F0323]
Length = 437
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 106/192 (55%), Gaps = 35/192 (18%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGG-VLNV 224
VAIVGRPNVGKS LFNRL G AIV + G TRDR YG+ W EF +VDTGG V+N
Sbjct: 5 VAIVGRPNVGKSTLFNRLTGTRAAIVSEHAGTTRDRQYGKCEWCNREFSIVDTGGWVVN- 63
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+I E+ I +Q A EE+ I+F+VD
Sbjct: 64 ---SDDIFEE--------------------------EIRKQVLVATEEADCILFVVDNDN 94
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGTG 343
G+T D+++A LR+ + +IL NKC+ K I Q +EF+ LG +P ISA +G+G
Sbjct: 95 GITDLDQQVATILRQTKVP--VILCANKCDD-NKDIYQSAEFYGLGLGTPYCISAATGSG 151
Query: 344 TGELLDLVCSEL 355
TG+LLDLV +L
Sbjct: 152 TGDLLDLVLEKL 163
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 74/153 (48%), Gaps = 29/153 (18%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
E +PR AIVGRPN GKS+L N +G +R IV D G TRD + R +F LVDT
Sbjct: 172 EARIPRFAIVGRPNAGKSSLINAFIGEDRHIVTDIAGTTRDSILTRYDKFGFDFYLVDTA 231
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G+ SK + EDL + + ++ AIE S V I L
Sbjct: 232 GIRKKSK----VNEDLEFYSVM-----------------------RSIRAIENSDVCILL 264
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNK 312
+D G+ + D I +++N K +++A+NK
Sbjct: 265 IDATRGIESQDMNIFQLVQRN--QKSLVVAINK 295
>gi|343509880|ref|ZP_08747142.1| GTP-binding protein EngA [Vibrio scophthalmi LMG 19158]
gi|343515692|ref|ZP_08752743.1| GTP-binding protein EngA [Vibrio sp. N418]
gi|342797862|gb|EGU33499.1| GTP-binding protein EngA [Vibrio sp. N418]
gi|342803677|gb|EGU39027.1| GTP-binding protein EngA [Vibrio scophthalmi LMG 19158]
Length = 497
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 113/196 (57%), Gaps = 40/196 (20%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YG++ GEH+F+++DTGG+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHDFIVIDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
S+ + +A +Q+ AAI+E+ V++FLVD
Sbjct: 61 ---DGSEEGVETKMA---------------------------QQSLAAIDEADVVLFLVD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSPL-PIS 337
G+AGLT AD+ IA LRK ++K +L VNK + GI ++FW LG + I+
Sbjct: 91 GRAGLTPADQAIAAHLRK--IEKPAMLVVNKVD----GIDPDAASADFWQLGMGDMYQIA 144
Query: 338 AISGTGTGELLDLVCS 353
A G G G+L+DL +
Sbjct: 145 AAHGRGVGQLIDLALN 160
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 95/206 (46%), Gaps = 36/206 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS L NR++G R +V D PG TRD +Y E++L+DT G+
Sbjct: 210 KMAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGI--- 266
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + NI E + + + + AIE++ V++ ++D +
Sbjct: 267 -RRRKNINETVEKFSVV-----------------------KTLKAIEDANVVLLVIDARE 302
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIM-QVSEFWS--LGFSPLP----IS 337
++ D + + + + I+LAVNK + + QV + LGF IS
Sbjct: 303 NISDQDLSLLGFALNS--GRSIVLAVNKWDGLNNDVKEQVKKELDRRLGFVDFARIHFIS 360
Query: 338 AISGTGTGELLDLVCSELKKVEVCIG 363
A+ GTG G L + V +G
Sbjct: 361 ALHGTGVGHLFESVQEAYNSATTRVG 386
>gi|374853981|dbj|BAL56875.1| small GTP-binding protein [uncultured Chloroflexi bacterium]
Length = 457
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 83/204 (40%), Positives = 108/204 (52%), Gaps = 29/204 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFNR VG AIV + PG TRDR++G W F +VDTGG+
Sbjct: 6 PLVALVGRPNVGKSTLFNRFVGERLAIVDETPGTTRDRIFGSCEWNGQIFDVVDTGGIDP 65
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ PL+T A I RQA +E + +++FL DGQ
Sbjct: 66 QHGGRS-----------------PLST---GSAEFIEEIRRQALLGVENADIVLFLTDGQ 105
Query: 284 AGLTAADEEIADWLRKNY-------MDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLP 335
G T AD EIA LR++ + I+L VNKCES + + F+ LG P
Sbjct: 106 EGPTPADHEIARLLRRHQKKTAAGKLSPPILLVVNKCESEAQRAASAA-FYELGLGEPHA 164
Query: 336 ISAISGTGTGELLDLVCSELKKVE 359
ISA+ GTGTG+LLD + L ++E
Sbjct: 165 ISALHGTGTGDLLDRIVELLPRIE 188
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 36/201 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVG+PNVGKS+L NRL+G R IV PG TRD + + L+DT G+
Sbjct: 197 KIAIVGKPNVGKSSLLNRLLGEERVIVSPIPGTTRDAIDTHLEYQGVPITLIDTAGIRRR 256
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ +P + E ++ ++ AI+ + V++ ++D +
Sbjct: 257 GRIEPGV-ETYSVLRSL--------------------------QAIDRADVVLLVIDATS 289
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS------LGFSPLPISA 338
G+TA D IA ++ + + K ++ VNK ++ +K Q E W L F +
Sbjct: 290 GITAQDAHIAGFILEAW--KSCVVVVNKWDAIQKD-SQTMEKWKQQIRQELNFMDYVPAL 346
Query: 339 ISGTGTGELLDLVCSELKKVE 359
TG+ +D + KV+
Sbjct: 347 FVSARTGQRVDQILPTALKVQ 367
>gi|269795286|ref|YP_003314741.1| hypothetical protein Sked_19830 [Sanguibacter keddieii DSM 10542]
gi|269097471|gb|ACZ21907.1| small GTP-binding protein domain/GTP-binding conserved hypothetical
protein [Sanguibacter keddieii DSM 10542]
Length = 531
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 103/194 (53%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +A+VGRPNVGKS L NR++G A+V D+PGVTRDR+ + WG FMLVDTGG
Sbjct: 96 LPVLAVVGRPNVGKSTLVNRIIGRREAVVEDKPGVTRDRVSYPAEWGGRRFMLVDTGGW- 154
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
E VA + + + QA AI + ++F+VD
Sbjct: 155 -----------------------------EVDVAGIEARVAEQAEVAISLADAVMFVVDA 185
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
G TA DE++ LRK+ K ++L NK + PR SE WSLG P P+SA+ G
Sbjct: 186 TVGPTATDEQVVKLLRKS--GKPVVLCANKVDGPR-AEADASELWSLGLGEPHPVSALHG 242
Query: 342 TGTGELLDLVCSEL 355
GTG+LLD +L
Sbjct: 243 RGTGDLLDAAMRKL 256
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 46/84 (54%)
Query: 138 TDDRKDSGKKQKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGV 197
T D D+ ++ KT G + RVA+VGRPNVGKS+L N++ G NR +V G
Sbjct: 245 TGDLLDAAMRKLPTKTEHGVAVPNGPRRVALVGRPNVGKSSLLNKVAGSNRVVVDPTAGT 304
Query: 198 TRDRMYGRSFWGEHEFMLVDTGGV 221
TRD + +++ VDT G+
Sbjct: 305 TRDPVDELIQLKGKDWVFVDTAGI 328
>gi|421837557|ref|ZP_16271700.1| GTP-binding protein Der, partial [Clostridium botulinum
CFSAN001627]
gi|409740273|gb|EKN40612.1| GTP-binding protein Der, partial [Clostridium botulinum
CFSAN001627]
Length = 204
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 81/194 (41%), Positives = 108/194 (55%), Gaps = 33/194 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L G +IV D PGVTRDR+Y + W ++F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAGKRISIVQDTPGVTRDRIYAEAEWLNYKFTMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P ED+ + S + RQA AIE + VIIFLVDG+
Sbjct: 62 ----EPK-SEDIIV----------------------SQMRRQAQIAIEMANVIIFLVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL AD+E+A LRK+ K ++L VNK + K EF++LG P+ IS+
Sbjct: 95 EGLAPADKEVAQMLRKS--KKPVVLVVNKIDK-LKDENNAYEFYNLGIGDPVTISSSQAL 151
Query: 343 GTGELLDLVCSELK 356
G G++LD V K
Sbjct: 152 GLGDMLDRVVEYFK 165
>gi|408423615|emb|CCJ11026.1| GTPase Der [Staphylococcus aureus subsp. aureus ST228]
gi|408425605|emb|CCJ12992.1| GTPase Der [Staphylococcus aureus subsp. aureus ST228]
gi|408427593|emb|CCJ14956.1| GTPase Der [Staphylococcus aureus subsp. aureus ST228]
gi|408429581|emb|CCJ26746.1| GTPase Der [Staphylococcus aureus subsp. aureus ST228]
gi|408431568|emb|CCJ18883.1| GTPase Der [Staphylococcus aureus subsp. aureus ST228]
gi|408433562|emb|CCJ20847.1| GTPase Der [Staphylococcus aureus subsp. aureus ST228]
gi|408435554|emb|CCJ22814.1| GTPase Der [Staphylococcus aureus subsp. aureus ST228]
gi|408437538|emb|CCJ24781.1| GTPase Der [Staphylococcus aureus subsp. aureus ST228]
Length = 436
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 104/193 (53%), Gaps = 34/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y W H+F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTIFNRIVGERVSIVEDTPGVTRDRIYSSGEWLTHDFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I QA AI E+ VIIF+V+ +
Sbjct: 62 ----------------------------EIGDAPFQTQIRAQAEIAIGEADVIIFMVNVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT +DE +A L K+ K ++LAVNK ++ V +F+SLGF P PIS G
Sbjct: 94 EGLTQSDEMVAQILYKS--KKPVVLAVNKVDNMEMR-TDVYDFYSLGFGEPYPISGSHGL 150
Query: 343 GTGELLDLVCSEL 355
G G+LLD V S
Sbjct: 151 GLGDLLDAVVSHF 163
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 82/162 (50%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R++I+GRPNVGKS+L N ++G +R IV + G TRD + + +++L+DT G+
Sbjct: 177 RLSIIGRPNVGKSSLVNAILGEDRVIVSNVAGTTRDAIDTEYSYDGQDYVLIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ ++D +
Sbjct: 234 -RKKGKVYE---------------STEKYSVLR--------ALKAIERSNVVLVVIDAEQ 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ +A + + K +++ VNK ++ K + +F
Sbjct: 270 GIIEQDKRVAGYAHEQ--GKAVVIVVNKWDTVEKDSKTMKKF 309
>gi|259500656|ref|ZP_05743558.1| ribosome-associated GTPase EngA [Lactobacillus iners DSM 13335]
gi|259168040|gb|EEW52535.1| ribosome-associated GTPase EngA [Lactobacillus iners DSM 13335]
Length = 442
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 108/194 (55%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA+VGRPNVGKS +FNR++ AIV D+PGVTRDR+Y + W +F+LVDTGG+
Sbjct: 10 LPVVALVGRPNVGKSTIFNRIINSRVAIVEDQPGVTRDRIYANAQWMGKQFVLVDTGGI- 68
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ N++E+ I+ QA AI E+ VI+ L D
Sbjct: 69 ---TFEDNVIEE--------------------------QIKTQAEIAINEADVIVMLSDV 99
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+T DE IA L K K IILA+NK ++P + + +F+SLG P+P+S G
Sbjct: 100 TGHVTNLDETIAKILYK--AKKPIILAINKADNPEQR-NDIYDFYSLGLGDPIPVSGSHG 156
Query: 342 TGTGELLDLVCSEL 355
TG G+LLD + S+
Sbjct: 157 TGLGDLLDAIVSKF 170
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 91/203 (44%), Gaps = 40/203 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R +I+GRPNVGKS++ N ++G NR IV D G TRD + ++ +VDT G+
Sbjct: 183 RFSIIGRPNVGKSSIVNSILGENRVIVADMEGTTRDAIDTIFEKDGQKYTIVDTAGIRRK 242
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K + E ++ +I +AIE+S V I ++D
Sbjct: 243 GKVYEKV-EKYSVMRSI--------------------------SAIEQSDVAIIVIDASV 275
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSPLPI 336
G+ D+ IA + K +I+AVNK + P K + EF L ++P+
Sbjct: 276 GIIEQDKHIAGYAHD--AGKGVIIAVNKWDVPSKTTTSMQDFVKVIRQEFQYLDYAPI-- 331
Query: 337 SAISGTGTGELLDLVCSELKKVE 359
TG+ ++ + S +K V+
Sbjct: 332 -VFVSAKTGQRIEDIVSLVKNVK 353
>gi|42519017|ref|NP_964947.1| GTP-binding protein EngA [Lactobacillus johnsonii NCC 533]
gi|227889871|ref|ZP_04007676.1| GTP-binding protein EngA [Lactobacillus johnsonii ATCC 33200]
gi|268319593|ref|YP_003293249.1| GTP-binding protein engA [Lactobacillus johnsonii FI9785]
gi|81832245|sp|Q74JL6.1|DER_LACJO RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|41583304|gb|AAS08913.1| probable GTP-binding protein EngA [Lactobacillus johnsonii NCC 533]
gi|227849735|gb|EEJ59821.1| GTP-binding protein EngA [Lactobacillus johnsonii ATCC 33200]
gi|262397968|emb|CAX66982.1| GTP-binding protein engA [Lactobacillus johnsonii FI9785]
Length = 435
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 107/194 (55%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA+VGRPNVGKS +FNR++ AIV D+ GVTRDR+Y R+ W HEF+L+DTGG
Sbjct: 3 LPVVALVGRPNVGKSTIFNRIINSRVAIVEDKAGVTRDRIYARAEWMGHEFILIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I L + E + I+ QA AI+E+ VI+ L D
Sbjct: 61 -----------------------ITLDSGE-----IEEQIKAQAEIAIDEADVIVMLGDV 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+T DE IA L + K +ILA+NK ++P + + +F+SLG P+P+S G
Sbjct: 93 TQHMTNMDETIAKMLYRT--KKPVILAINKADNPEQR-TDIYDFYSLGLGDPIPVSGSHG 149
Query: 342 TGTGELLDLVCSEL 355
TG G+LLD + E
Sbjct: 150 TGMGDLLDAIVGEF 163
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 92/196 (46%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R +++GRPNVGKS+L N ++G R IV + G TRD + ++ +VDT G+
Sbjct: 176 RFSVIGRPNVGKSSLVNAILGEQRVIVSNIEGTTRDAIDTTFTNDGQKYTIVDTAGI--- 232
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E T + +V R A +AIEES + + ++D
Sbjct: 233 -RRRGKVYE---------------KTEKYSVLR--------AISAIEESDITLLVLDAST 268
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPLP- 335
G+ D+ +A + + +I+ VNK + P+K + EF L ++P+
Sbjct: 269 GIREQDKHVAGYAHD--AGRGVIIVVNKWDLPKKDSRSMKDFEDTIRREFQYLDYAPIIF 326
Query: 336 ISAISGTGTGELLDLV 351
+SA +G ++L LV
Sbjct: 327 VSAKTGQRVPDILKLV 342
>gi|417837660|ref|ZP_12483898.1| GTP-binding protein EngA [Lactobacillus johnsonii pf01]
gi|338761203|gb|EGP12472.1| GTP-binding protein EngA [Lactobacillus johnsonii pf01]
Length = 435
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 107/194 (55%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA+VGRPNVGKS +FNR++ AIV D+ GVTRDR+Y R+ W HEF+L+DTGG
Sbjct: 3 LPVVALVGRPNVGKSTIFNRIINSRVAIVEDKAGVTRDRIYARAEWMGHEFILIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I L + E + I+ QA AI+E+ VI+ L D
Sbjct: 61 -----------------------ITLDSGE-----IEEQIKAQAEIAIDEADVIVMLGDV 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+T DE IA L + K +ILA+NK ++P + + +F+SLG P+P+S G
Sbjct: 93 TQHMTNMDETIAKMLYRT--KKPVILAINKADNPEQR-TDIYDFYSLGLGDPIPVSGSHG 149
Query: 342 TGTGELLDLVCSEL 355
TG G+LLD + E
Sbjct: 150 TGMGDLLDAIVGEF 163
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 92/196 (46%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R +++GRPNVGKS+L N ++G R IV + G TRD + ++ +VDT G+
Sbjct: 176 RFSVIGRPNVGKSSLVNTILGEQRVIVSNIEGTTRDAIDTTFTNDGQKYTIVDTAGI--- 232
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E T + +V R A +AIEES + + ++D
Sbjct: 233 -RRRGKVYE---------------KTEKYSVLR--------AISAIEESDITLLVLDAST 268
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPLP- 335
G+ D+ +A + + +I+ VNK + P+K + EF L ++P+
Sbjct: 269 GIREQDKHVAGYAHD--AGRGVIIVVNKWDLPKKDSRSMKDFEDTIRREFQYLDYAPIIF 326
Query: 336 ISAISGTGTGELLDLV 351
+SA +G ++L LV
Sbjct: 327 VSAKTGQRVPDILKLV 342
>gi|436838611|ref|YP_007323827.1| ribosome-associated GTPase EngA [Fibrella aestuarina BUZ 2]
gi|384070024|emb|CCH03234.1| ribosome-associated GTPase EngA [Fibrella aestuarina BUZ 2]
Length = 435
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/191 (39%), Positives = 106/191 (55%), Gaps = 33/191 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRL+ +AI+ ++ GVTRDR YGR+ W +H F ++DTGG +
Sbjct: 5 VAIVGRPNVGKSTLFNRLIEQRQAIMDNQSGVTRDRHYGRAEWTDHFFTVIDTGGYV--- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+G E + I Q A++E+ V++F+VD G
Sbjct: 62 ---------------VGSEDV-----------FEEAIREQVEIALDEATVVLFVVDTMTG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+T D+E A+ LR++ K + L NK E+ + + SEF+ LG P PISA +G+GT
Sbjct: 96 ITGLDDEFANVLRRS--KKPVFLVANKAETSDR-MHAASEFYGLGMGEPYPISAQTGSGT 152
Query: 345 GELLDLVCSEL 355
G+LLD V
Sbjct: 153 GDLLDAVVKHF 163
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 77/173 (44%), Gaps = 30/173 (17%)
Query: 159 PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDT 218
P+ +PR+AI+GRPNVGKS+ N L+G R IV D G TRD + EF+L DT
Sbjct: 171 PDEGIPRIAILGRPNVGKSSFVNTLLGVERNIVTDIAGTTRDAINSHYKAFGKEFILTDT 230
Query: 219 GGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIF 278
G+ ++ NI E + TI A+EES V +
Sbjct: 231 AGLRRKARVSDNI-EFYSTLRTI--------------------------KAMEESDVCVI 263
Query: 279 LVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF 331
L+D G+ D I K K +++ VNK ++ K + ++ W F
Sbjct: 264 LLDATRGMEGQDMTIIGQAIK--AKKGVVIMVNKWDAVEKD-HKTADVWRKEF 313
>gi|374851718|dbj|BAL54670.1| small GTP-binding protein, partial [uncultured Chloroflexi
bacterium]
Length = 401
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 83/204 (40%), Positives = 108/204 (52%), Gaps = 29/204 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFNR VG AIV + PG TRDR++G W F +VDTGG+
Sbjct: 6 PLVALVGRPNVGKSTLFNRFVGERLAIVDETPGTTRDRIFGSCEWNGQIFDVVDTGGIDP 65
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ PL+T A I RQA +E + +++FL DGQ
Sbjct: 66 QHGGRS-----------------PLST---GSAEFIEEIRRQALLGVENADIVLFLTDGQ 105
Query: 284 AGLTAADEEIADWLRKNY-------MDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLP 335
G T AD EIA LR++ + I+L VNKCES + + F+ LG P
Sbjct: 106 EGPTPADHEIARLLRRHQKKTAAGKLSPPILLVVNKCESEAQRAASAA-FYELGLGEPHA 164
Query: 336 ISAISGTGTGELLDLVCSELKKVE 359
ISA+ GTGTG+LLD + L ++E
Sbjct: 165 ISALHGTGTGDLLDRIVELLPRIE 188
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 80/163 (49%), Gaps = 30/163 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVG+PNVGKS+L NRL+G R IV PG TRD + + L+DT G+
Sbjct: 197 KIAIVGKPNVGKSSLLNRLLGEERVIVSPIPGTTRDAIDTHLEYQGVPITLIDTAGIRRR 256
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ +P + E ++ ++ AI+ + V++ ++D +
Sbjct: 257 GRIEPGV-ETYSVLRSL--------------------------QAIDRADVVLLVIDATS 289
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFW 327
G+TA D IA ++ + + K ++ VNK ++ +K Q E W
Sbjct: 290 GITAQDAHIAGFILEAW--KSCVVVVNKWDAIQKD-SQTMEKW 329
>gi|161485612|ref|YP_386558.2| GTP-binding protein Der [Desulfovibrio alaskensis G20]
gi|342906261|gb|ABB36863.2| GTP-binding protein engA [Desulfovibrio alaskensis G20]
Length = 455
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/204 (38%), Positives = 110/204 (53%), Gaps = 39/204 (19%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP++A++GRPNVGKS LFNRL+ NRAI D PGVTRDRM G G+ +F+++DTGG+
Sbjct: 1 MLPKIALIGRPNVGKSTLFNRLIRSNRAITHDRPGVTRDRMEGYVKVGDRKFIIIDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMP-------SMIERQATAAIEESC 274
AAVA P + I RQ AI +S
Sbjct: 61 --------------------------TLDEHAAVAEGPDELRGFEAEILRQTEEAIADSV 94
Query: 275 VIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL 334
+ +VDG+ GLT DE +A ++RK+ K ++LAVNK + + ++EF +LGF +
Sbjct: 95 ALCLVVDGREGLTPFDESLAAYVRKS--GKPVLLAVNKVDGEEMADLYMAEFHTLGFPVI 152
Query: 335 PISAISGTG----TGELLDLVCSE 354
P+S G +GEL DL+ E
Sbjct: 153 PLSGAHGFNVRAFSGELFDLLPPE 176
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 36/216 (16%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++A++GRPN GKS+L N L G R IV D G TRD + G ++ VDT GV
Sbjct: 190 KLAMLGRPNAGKSSLVNALSGSRRMIVSDVAGTTRDSVDIAVELGGRRYVFVDTAGVRRR 249
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+K Q + +E ++ +++ + ++ V + ++D
Sbjct: 250 AKIQ-DPVERYSVNSSL--------------------------KSTTKADVTLVVLDAVE 282
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCE-SPRKGIMQVSEFW--SLGFSP----LPIS 337
GLT D+ + D L + +L +NK + PR G+ + + +L F + IS
Sbjct: 283 GLTQQDKRLIDLLDERKTP--FMLVINKIDLVPRDGLTALKRLYDDALTFCKHVPIMYIS 340
Query: 338 AISGTGTGELLDLVCSELKKVEVCIGFLLICNAITK 373
A SG G +LL + K+ V +G L+ +T+
Sbjct: 341 ARSGRGVDKLLPMARKINKECYVRVGTGLLNRTLTE 376
>gi|313890874|ref|ZP_07824498.1| ribosome biogenesis GTPase Der [Streptococcus pseudoporcinus SPIN
20026]
gi|416852038|ref|ZP_11909183.1| ribosome-associated GTPase EngA [Streptococcus pseudoporcinus LQ
940-04]
gi|313120772|gb|EFR43887.1| ribosome biogenesis GTPase Der [Streptococcus pseudoporcinus SPIN
20026]
gi|356739527|gb|EHI64759.1| ribosome-associated GTPase EngA [Streptococcus pseudoporcinus LQ
940-04]
Length = 436
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/199 (39%), Positives = 109/199 (54%), Gaps = 34/199 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTTGEWLNRKFSLIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAQIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L + + K +ILA+NK ++P + +F+SLG P P+S++ G
Sbjct: 93 KEGVTDADEYVAKMLYRTH--KPVILAINKVDNPEMR-NDIYDFYSLGLGDPYPLSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEV 360
GTG++LD + L EV
Sbjct: 150 IGTGDVLDAIVENLPVEEV 168
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 92/198 (46%), Gaps = 41/198 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
R +++GRPNVGKS+L N ++G +R I G TRD + SF EF ++DT G+
Sbjct: 176 RFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAI-DTSFTDSDGQEFTMIDTAGMR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A AI+ S V++ +++
Sbjct: 235 KSGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVINA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPL 334
+ G+ D+ IA + + K +I+ VNK ++ K VS +F L ++P+
Sbjct: 268 EEGIREYDKRIAGFAHE--AGKGMIIVVNKWDTISKDNHTVSKWEEDIRDQFQFLSYAPI 325
Query: 335 P-ISAISGTGTGELLDLV 351
+SA++ +L +L+
Sbjct: 326 IFVSALTKQRLNKLPELI 343
>gi|338211231|ref|YP_004655284.1| GTP-binding protein engA [Runella slithyformis DSM 19594]
gi|336305050|gb|AEI48152.1| GTP-binding protein engA [Runella slithyformis DSM 19594]
Length = 435
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 106/192 (55%), Gaps = 33/192 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS FNRL+ +AI+ D+ GVTRDR YG +FW E F ++DTGG + S
Sbjct: 5 VAIVGRPNVGKSTFFNRLIKERQAIMDDQSGVTRDRHYGHAFWTEQYFTVIDTGGYVVGS 64
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
++ ED A RE Q A++E+ VI+F+VD AG
Sbjct: 65 D---DVFED--------------AIRE------------QVEIAMDEATVILFMVDSMAG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
LT D+E A +R++ K + L NK E+ + +EF+ LG P P+S+ +G GT
Sbjct: 96 LTDLDKEFAGVVRRS--KKPVFLVANKAETVERQ-HATAEFYELGLGDPYPVSSQTGHGT 152
Query: 345 GELLDLVCSELK 356
G+LLD V K
Sbjct: 153 GDLLDEVVKHFK 164
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 74/156 (47%), Gaps = 29/156 (18%)
Query: 159 PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDT 218
P+ +P+++I+GRPNVGKS+ N L G R+IV D G TRD + +F+LVDT
Sbjct: 171 PDAGIPKISILGRPNVGKSSFLNVLTGKERSIVTDIAGTTRDAINTHYKAFGKDFILVDT 230
Query: 219 GGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIF 278
G+ + + + + + +T+ + A+EES V+I
Sbjct: 231 AGI----RRKAKVKDAIEFYSTL-----------------------RTVKAMEESDVVIV 263
Query: 279 LVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
++D GL A D I K K I++ +NK +
Sbjct: 264 MLDATRGLEAQDMHIIGMAHK--AKKGILIMINKWD 297
>gi|167768008|ref|ZP_02440061.1| hypothetical protein CLOSS21_02551 [Clostridium sp. SS2/1]
gi|317498398|ref|ZP_07956693.1| ribosome-associated GTPase EngA [Lachnospiraceae bacterium
5_1_63FAA]
gi|429761254|ref|ZP_19293684.1| ribosome biogenesis GTPase Der [Anaerostipes hadrus DSM 3319]
gi|167710337|gb|EDS20916.1| ribosome biogenesis GTPase Der [Clostridium sp. SS2/1]
gi|291561010|emb|CBL39810.1| ribosome-associated GTPase EngA [butyrate-producing bacterium
SSC/2]
gi|316894292|gb|EFV16479.1| ribosome-associated GTPase EngA [Lachnospiraceae bacterium
5_1_63FAA]
gi|429184278|gb|EKY25301.1| ribosome biogenesis GTPase Der [Anaerostipes hadrus DSM 3319]
Length = 440
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/190 (42%), Positives = 108/190 (56%), Gaps = 32/190 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS LFN L G +IV D PGVTRDR+Y W ++F L+DTGG+
Sbjct: 4 PIIAIVGRPNVGKSTLFNALAGEKISIVKDTPGVTRDRIYADVTWLNYQFTLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P+ DL ++ G QA A+E + VIIFL D +
Sbjct: 62 ----EPD-SGDLLLSHMRG----------------------QAEIAMETADVIIFLTDVR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGT 342
GL AD ++AD LR++ K I+LAVNK ++ K ++ EF++LG +P P+SA S
Sbjct: 95 QGLVDADYQVADMLRRS--GKPIVLAVNKVDNYEKFVLDTYEFYNLGLGTPFPVSANSKI 152
Query: 343 GTGELLDLVC 352
G G+LLD V
Sbjct: 153 GFGDLLDEVL 162
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 78/163 (47%), Gaps = 29/163 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
PRVAI+G+PN GKS+L N+L+G +R IV D G TRD + E++ +DT G+
Sbjct: 178 PRVAIIGKPNAGKSSLINKLLGEDRLIVSDIAGTTRDAIDTTVKRNGKEYVFIDTAGL-- 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ + + ED+ + I + AA+E V I ++D +
Sbjct: 236 --RKKARVKEDIERYSVI-----------------------RTVAAVERCDVAILVIDAE 270
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+T D +IA + K +I+AVNK + K + +F
Sbjct: 271 EGITEQDAKIAGIAHER--GKGMIIAVNKWDLIEKNDKTIYKF 311
>gi|28210831|ref|NP_781775.1| GTP-binding protein EngA [Clostridium tetani E88]
gi|37999662|sp|Q895X8.1|DER_CLOTE RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|28203269|gb|AAO35712.1| GTP-binding protein [Clostridium tetani E88]
Length = 438
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/195 (42%), Positives = 108/195 (55%), Gaps = 33/195 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L G AIV D PGVTRDR+Y ++ W H F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAGKRIAIVEDTPGVTRDRIYAQAEWLNHNFTIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P + + VA+M RQA AIE + VI+F+VDG+
Sbjct: 62 ----EPE-------------------SEDIIVAQM----RRQAEMAIEMADVIMFIVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT AD E+A LRK+ K I+L VNK + + + EF++LG P ISA
Sbjct: 95 EGLTPADNEVALMLRKS--KKPIVLVVNKIDRIEEE-DNMYEFYNLGIGEPTTISASQAL 151
Query: 343 GTGELLDLVCSELKK 357
G G++LD + K
Sbjct: 152 GLGDMLDKIVENFPK 166
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 97/199 (48%), Gaps = 46/199 (23%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R+A VG+PNVGKS+L N+++G R IV + PG TRD + E +F+L+DT G+
Sbjct: 178 RIAFVGKPNVGKSSLINKILGEERNIVSNIPGTTRDAIDSFLERDEDKFILIDTAGLRRR 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQAT----AAIEESCVIIFLV 280
SK + IER +T AAI+ + V I L+
Sbjct: 238 SK-------------------------------VKDQIERYSTVRTYAAIDRADVCILLI 266
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS--------LGFS 332
D + G++ D++I + + ++K +++ VNK + K ++ F + ++
Sbjct: 267 DAEEGISEQDKKIIGYAHE--LNKALMVVVNKWDLIEKETNTMNRFKKELQSELSFMSYA 324
Query: 333 P-LPISAISGTGTGELLDL 350
P + ISA +G G++LDL
Sbjct: 325 PYIFISAKTGQRVGKVLDL 343
>gi|407474170|ref|YP_006788570.1| GTP-binding protein EngA [Clostridium acidurici 9a]
gi|407050678|gb|AFS78723.1| GTP-binding protein EngA [Clostridium acidurici 9a]
Length = 439
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 107/193 (55%), Gaps = 33/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNR+VG +IV D+PGVTRDR+Y + W F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTLFNRIVGERISIVEDKPGVTRDRIYAEAEWLNKYFTLIDTGGIEP 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
SK D+ + S + RQA AIE VI+F+VDG
Sbjct: 64 ESK-------DIIL----------------------SQMRRQAEIAIETGDVILFVVDGL 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGT 342
GLT+ D E+A+ LR++ K ++L NK ++P K + EF+ LG SP+ ISA
Sbjct: 95 EGLTSTDREVAEMLRRS--GKEVLLVCNKIDTP-KNPDSIYEFYELGLGSPIVISAGQSL 151
Query: 343 GTGELLDLVCSEL 355
G G+LLD V
Sbjct: 152 GLGDLLDEVIGHF 164
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 95/198 (47%), Gaps = 42/198 (21%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VA++G+PN GKS+L N+++G NR IV D G TRD + GE +++L+DT G+
Sbjct: 178 KVAVIGKPNAGKSSLINKVLGENRVIVSDIAGTTRDAIDTPFTRGEDKYVLIDTAGL--- 234
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + N+ E + + I + AIE S V + ++D
Sbjct: 235 -RRKKNVDESIERYSVI-----------------------RTLMAIERSDVCVIMIDATE 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKG----------IMQVSEFWSLGFSPL 334
G+T D +IA + N K ++ VNK ++ KG +M F + ++P+
Sbjct: 271 GVTEQDAKIAGYAHNN--GKASVIVVNKWDAIEKGDKTYLDFEKEVMNTLSFMT--YAPI 326
Query: 335 P-ISAISGTGTGELLDLV 351
ISA +G +L DL+
Sbjct: 327 IFISAKTGQRVNKLFDLI 344
>gi|260910017|ref|ZP_05916700.1| ribosome-associated GTPase EngA [Prevotella sp. oral taxon 472 str.
F0295]
gi|260635847|gb|EEX53854.1| ribosome-associated GTPase EngA [Prevotella sp. oral taxon 472 str.
F0295]
Length = 437
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 106/193 (54%), Gaps = 35/193 (18%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGG-VLNV 224
VAIVGRPNVGKS LFNRL AIV D G TRDR YG+ W EF +VDTGG V+N
Sbjct: 5 VAIVGRPNVGKSTLFNRLTKTRSAIVSDTAGTTRDRQYGKCDWSGREFSVVDTGGWVVN- 63
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+I ED I RQ A EE+ +++FLVD
Sbjct: 64 ---SDDIFED--------------------------AIRRQVLVATEEADLVLFLVDVNT 94
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTG 343
G+T DE++A LR+ + ++L VNK ++ + I + F+SLG P PISA +G+G
Sbjct: 95 GVTDLDEDVAQILRRTKVP--VLLVVNKADNNEQ-IYEAPVFYSLGLGDPFPISAATGSG 151
Query: 344 TGELLDLVCSELK 356
TG+LLD V +LK
Sbjct: 152 TGDLLDAVIEKLK 164
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 76/155 (49%), Gaps = 29/155 (18%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
E +PR A+VGRPNVGKS++ N +G +R IV + G TRD +Y R +F LVDT
Sbjct: 172 EDGIPRFAVVGRPNVGKSSIINAFIGEDRNIVTEIAGTTRDSIYTRFDKFGFDFYLVDTA 231
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G+ + + + EDL + + ++ +IE S V I +
Sbjct: 232 GI----RRKNKVTEDLEFYSVM-----------------------RSIRSIEHSDVCILM 264
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
+D G+ A D I ++KN K +++ VNK +
Sbjct: 265 IDATRGIEAQDMNIFQLIQKN--QKSLVVVVNKWD 297
>gi|330997747|ref|ZP_08321586.1| ribosome biogenesis GTPase Der [Paraprevotella xylaniphila YIT
11841]
gi|329569846|gb|EGG51604.1| ribosome biogenesis GTPase Der [Paraprevotella xylaniphila YIT
11841]
Length = 437
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 83/194 (42%), Positives = 109/194 (56%), Gaps = 35/194 (18%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGG-VLNV 224
VAIVGRPNVGKS LFNRL AIV DE G TRDR YG+S W EF ++DTGG V+N
Sbjct: 5 VAIVGRPNVGKSTLFNRLTQTRHAIVSDEAGTTRDRQYGKSEWTGCEFSVIDTGGWVVN- 63
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+I E+ I +Q T A EE+ V++FLVD +
Sbjct: 64 ---SDDIFEE--------------------------EIRKQVTLATEEADVVLFLVDVRN 94
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTG 343
G+T DE +A+ LR+ K +IL NK ++ + I +EF++LG P ISA +G+G
Sbjct: 95 GVTDLDEAVANILRRT--KKPVILVANKADT-NEWIYSAAEFYALGLGDPYCISAATGSG 151
Query: 344 TGELLDLVCSELKK 357
TGELLD + S+ K
Sbjct: 152 TGELLDQIVSKFPK 165
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 29/161 (18%)
Query: 154 TIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEF 213
TI + + +PR A+VGRPNVGKS+L N +G R IV D G TRD +Y R +F
Sbjct: 166 TIDDETDENIPRFAVVGRPNVGKSSLINAFIGEERNIVTDIAGTTRDSIYTRYTKFGFDF 225
Query: 214 MLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEES 273
LVDT G+ + + + EDL + + ++ AIE S
Sbjct: 226 YLVDTAGI----RRKNKVTEDLEYYSVM-----------------------RSIRAIENS 258
Query: 274 CVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
V I ++D + G+ A D I +++N +K +++ VNK +
Sbjct: 259 DVCILMLDAERGIEAQDLNIFQLIQRN--NKSLVVVVNKWD 297
>gi|306827971|ref|ZP_07461238.1| ribosome-associated GTPase EngA [Streptococcus pyogenes ATCC 10782]
gi|304429890|gb|EFM32932.1| ribosome-associated GTPase EngA [Streptococcus pyogenes ATCC 10782]
Length = 436
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 109/200 (54%), Gaps = 34/200 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 2 VLPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRQFSLIDTGGI 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+V A I+ QA A+EE+ VI+F+V
Sbjct: 62 DDVD------------------------------APFMEQIKHQAQIAMEEADVIVFVVS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE ++ L + + +ILAVNK ++P + +F+SLG P P+S++
Sbjct: 92 GKEGVTDADEYVSKILYRT--NTPVILAVNKVDNPEMR-NDIYDFYSLGLGDPYPVSSVH 148
Query: 341 GTGTGELLDLVCSELKKVEV 360
G GTG++LD + L EV
Sbjct: 149 GIGTGDVLDAIVENLPVEEV 168
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 90/195 (46%), Gaps = 39/195 (20%)
Query: 167 AIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLNVS 225
+++GRPNVGKS+L N ++G +R I G TRD + + EF ++DT G+
Sbjct: 178 SLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTHFTDADGQEFTMIDTAGMRKSG 237
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
K N T + +V R A AI+ S V++ +++ + G
Sbjct: 238 KIYEN-------------------TEKYSVMR--------AIRAIDRSDVVLMVINAEEG 270
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPLP-I 336
+ D+ IA + + K +I+ VNK ++ K V+ +F L ++P+ +
Sbjct: 271 IREYDKRIAGFAHE--AGKGMIIVVNKWDTIDKDNHTVAKWEADIRDQFQFLTYAPIIFV 328
Query: 337 SAISGTGTGELLDLV 351
SA++ +L DL+
Sbjct: 329 SALTKQRLNKLPDLI 343
>gi|83945266|ref|ZP_00957615.1| GTP-binding protein EngA [Oceanicaulis sp. HTCC2633]
gi|83851436|gb|EAP89292.1| GTP-binding protein EngA [Oceanicaulis sp. HTCC2633]
Length = 459
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 86/186 (46%), Positives = 104/186 (55%), Gaps = 34/186 (18%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNRL G AIV D PGVTRDR R G+ E LVDT G
Sbjct: 5 LPALAIVGRPNVGKSTLFNRLAGKPLAIVDDRPGVTRDRREARGRIGDLELRLVDTAG-- 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
ED G+E ARM + Q AA++E+ V +FL+DG
Sbjct: 63 ---------YED----DKAGIE-----------ARMRA----QTEAALDEADVCVFLIDG 94
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+TA DE A+ LRK++ K +ILAVNKCE KG E W LG P+P+SA G
Sbjct: 95 REGITAMDERFAEVLRKSH--KPVILAVNKCEGA-KGEYGAMEAWKLGMGEPVPVSAAHG 151
Query: 342 TGTGEL 347
G G+L
Sbjct: 152 EGMGDL 157
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 89/207 (42%), Gaps = 38/207 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R+A+ GRPNVGKS L N L+G +R I E G+TRD + W L DT G+
Sbjct: 193 RLAVAGRPNVGKSTLINALIGEDRLITGPEAGLTRDAIAVEWEWDGQRVRLHDTAGLRKR 252
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K ++D R+ M AI+ + +++ LVD +
Sbjct: 253 GK-----VDD----------------------RLERMSAADTLRAIKFAEIVLLLVDAER 285
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQV-SEFWSL-----GFSPLP 335
D IAD R + +++ + K E + + ++ EF L G +P
Sbjct: 286 PFEKQDLTIAD--RVVTEGRGLVVLITKWDLIEDKQAKLAELREEFERLLPQIKGAPLIP 343
Query: 336 ISAISGTGTGELLDLVCSELKKVEVCI 362
IS+ISG G +++ V + K +V +
Sbjct: 344 ISSISGRGLEKIMPAVSALHKNWDVKV 370
>gi|262282140|ref|ZP_06059909.1| GTP-binding protein engA [Streptococcus sp. 2_1_36FAA]
gi|262262594|gb|EEY81291.1| GTP-binding protein engA [Streptococcus sp. 2_1_36FAA]
Length = 436
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 110/200 (55%), Gaps = 34/200 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV + GVTRDR+Y + W +F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVENVEGVTRDRIYATADWLNRKFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ I+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADAIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L K + K IILAVNK ++P ++ +F++LG P P+S++ G
Sbjct: 93 KEGITDADEYVARMLYKTH--KPIILAVNKVDNPEMR-NEIFDFYALGLGDPFPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEVC 361
GTG++LD + L EV
Sbjct: 150 IGTGDVLDAIVENLPNEEVA 169
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 90/197 (45%), Gaps = 39/197 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTVFTDSEGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPLP 335
G+ D+ IA + + K I++ VNK ++ K + +F L ++P+
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGIVIVVNKWDTLEKDNYTMKDWEADIRDQFQYLSYAPII 326
Query: 336 -ISAISGTGTGELLDLV 351
+SA++ +L D++
Sbjct: 327 FVSALTKQRLHKLPDMI 343
>gi|291519504|emb|CBK74725.1| ribosome-associated GTPase EngA [Butyrivibrio fibrisolvens 16/4]
Length = 441
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/190 (41%), Positives = 110/190 (57%), Gaps = 32/190 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN L G +IV D PGVTRDR+Y W ++F ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTLFNALAGERISIVKDTPGVTRDRIYADVSWLNYDFTMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P+ T + +++M QA AI+ + VIIFLVD +
Sbjct: 62 ----EPD-------------------TNDIILSQM----REQAQIAIDTADVIIFLVDVK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL +D ++AD LR+++ K +IL VNK +S + + V EF++LG P+P+SA S
Sbjct: 95 QGLQDSDSKVADMLRRSH--KPVILVVNKVDSFERDMADVYEFYNLGIGDPIPVSASSRL 152
Query: 343 GTGELLDLVC 352
G G++LD V
Sbjct: 153 GFGDMLDKVV 162
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 97/205 (47%), Gaps = 38/205 (18%)
Query: 156 GNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFML 215
G E P++A++G+PNVGKS+L N+L G R IV D G TRD + R + +++
Sbjct: 170 GEEEEDDTPKIAVIGKPNVGKSSLINKLCGEERVIVSDIAGTTRDAVDTRVRYNHKDYIF 229
Query: 216 VDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCV 275
+DT G+ SK I EDL + + +A A++E++ V
Sbjct: 230 IDTAGLRRKSK----IKEDLERYSIV-----------------------RAVASVEKADV 262
Query: 276 IIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----LG 330
+I ++D G+T D +IA + K II+ VNK ++ K + E + L
Sbjct: 263 VIIMIDATEGVTEQDAKIAGIAHER--GKGIIICVNKWDAIEKNDKTMKEHETKIRQILS 320
Query: 331 FSP----LPISAISGTGTGELLDLV 351
F P L IS SG G++ + +
Sbjct: 321 FMPYASILFISVKSGQRLGKIYETI 345
>gi|226324619|ref|ZP_03800137.1| hypothetical protein COPCOM_02403 [Coprococcus comes ATCC 27758]
gi|225207067|gb|EEG89421.1| ribosome biogenesis GTPase Der [Coprococcus comes ATCC 27758]
Length = 442
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 110/191 (57%), Gaps = 32/191 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN L G AIV D PGVTRDR+Y W + EF L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTLFNALAGEKIAIVKDTPGVTRDRIYAEVNWLDKEFTLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P+ +R+ +++M QA AI+ + VI+F+ D +
Sbjct: 62 ----EPD-------------------SRDVILSQM----REQAQIAIDTADVILFMTDVK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL +D ++AD LR+++ K +IL VNK ++ K + V EF++LG P+PISA
Sbjct: 95 QGLVDSDSKVADMLRRSH--KPVILVVNKVDNFNKMMPDVYEFYNLGIGDPVPISASERI 152
Query: 343 GTGELLDLVCS 353
G G++LD V +
Sbjct: 153 GIGDMLDKVLA 163
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 100/213 (46%), Gaps = 40/213 (18%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
PRVAIVG+PNVGKS++ NRL+G +R IV D G TRD + E++ +DT G+
Sbjct: 178 PRVAIVGKPNVGKSSIINRLIGKDRVIVSDIAGTTRDAIDTEVVHNGKEYVFIDTAGL-- 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ + I E+L + I + A+E + V++ ++D
Sbjct: 236 --RRKNKIKEELERYSII-----------------------RTVTAVERADVVLVVIDAA 270
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF-----WSLGFSP----L 334
G+T D +IA + K +I+ VNK ++ K E+ L F P +
Sbjct: 271 EGVTEQDAKIAGIAHER--GKGVIIVVNKWDAIEKNDKTTREYEHQIRMVLSFLPYAEIM 328
Query: 335 PISAISGTGTGELLDLVCS--ELKKVEVCIGFL 365
+SA++G +L D++ + E + + V G L
Sbjct: 329 YVSALTGQRLPKLFDMIDTVIENQTLRVATGVL 361
>gi|392330713|ref|ZP_10275328.1| GTP-binding protein EngA [Streptococcus canis FSL Z3-227]
gi|391418392|gb|EIQ81204.1| GTP-binding protein EngA [Streptococcus canis FSL Z3-227]
Length = 436
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 77/195 (39%), Positives = 107/195 (54%), Gaps = 34/195 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 2 VLPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRQFSLIDTGGI 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+V A I+ QA A+EE+ VI+F+V
Sbjct: 62 DDVD------------------------------APFMEQIKHQAQIAMEEADVIVFVVS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE ++ L + + +ILAVNK ++P + +F+SLG P PIS++
Sbjct: 92 GKEGVTDADEYVSKILYRT--NTPVILAVNKVDNPEMR-NDIYDFYSLGLGDPYPISSVH 148
Query: 341 GTGTGELLDLVCSEL 355
G GTG++LD + L
Sbjct: 149 GIGTGDVLDAIVENL 163
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 102/221 (46%), Gaps = 43/221 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
R +++GRPNVGKS+L N ++G +R I G TRD + + EF ++DT G+
Sbjct: 176 RFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTHFTDADGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKIYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVINAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPLP 335
G+ D+ IA + + K +I+ VNK ++ K V+ +F L ++P+
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGMIIVVNKWDTIDKDNHTVAKWEADIRDQFQFLTYAPII 326
Query: 336 -ISAISGTGTGELLDLVC----SELKKVEVCIGFLLICNAI 371
+SA++ +L +L+ S+ K++ + +I +AI
Sbjct: 327 FVSALTKQRLNKLPELIKGISDSQNKRIPSAVLNEVIMDAI 367
>gi|408401081|ref|YP_006859044.1| GTP-binding protein [Streptococcus dysgalactiae subsp. equisimilis
RE378]
gi|407967309|dbj|BAM60547.1| GTP-binding protein [Streptococcus dysgalactiae subsp. equisimilis
RE378]
Length = 436
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 109/200 (54%), Gaps = 34/200 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 2 VLPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRQFSLIDTGGI 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+V A I+ QA A+EE+ VI+F+V
Sbjct: 62 DDVD------------------------------APFMEQIKHQAQIAMEEADVIVFVVS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE ++ L + + +ILAVNK ++P + +F+SLG P P+S++
Sbjct: 92 GKEGVTDADEYVSKILYRT--NTPVILAVNKVDNPEMR-NDIYDFYSLGLGDPYPVSSVH 148
Query: 341 GTGTGELLDLVCSELKKVEV 360
G GTG++LD + L EV
Sbjct: 149 GIGTGDVLDAIVENLPVEEV 168
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 91/197 (46%), Gaps = 39/197 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
R +++GRPNVGKS+L N ++G +R I G TRD + + EF ++DT G+
Sbjct: 176 RFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTHFTDADGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKIYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVINAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPLP 335
G+ D+ IA + + K +I+ VNK ++ K V+ +F L ++P+
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGMIIVVNKWDTIDKDNHTVAQWEADIRDQFQFLAYAPII 326
Query: 336 -ISAISGTGTGELLDLV 351
+SA++ +L +L+
Sbjct: 327 FVSALTKQRLNKLPELI 343
>gi|375089285|ref|ZP_09735612.1| ribosome-associated GTPase EngA [Facklamia languida CCUG 37842]
gi|374567061|gb|EHR38292.1| ribosome-associated GTPase EngA [Facklamia languida CCUG 37842]
Length = 437
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 80/184 (43%), Positives = 105/184 (57%), Gaps = 34/184 (18%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
+P VAIVGRPNVGKS LFNR+VG +IV D GVTRDR+Y + W EF L+DTGG
Sbjct: 3 IPVVAIVGRPNVGKSTLFNRMVGERLSIVEDYEGVTRDRIYATASWLGREFRLIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I M PL + I+ QA A+EE+ VI+F+V
Sbjct: 61 ------------------IDMSDEPLMQQ----------IKYQAEIAMEEADVILFVVGS 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE IA +L ++ +K ++LAVNK ++P + EF+SLG P PIS+ G
Sbjct: 93 REGVTDADEAIAHYLHRS--EKPVVLAVNKADNPEQR-ATAYEFYSLGHGDPYPISSTHG 149
Query: 342 TGTG 345
TGTG
Sbjct: 150 TGTG 153
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 92/198 (46%), Gaps = 41/198 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
+ + +GRPNVGKS+L N ++ R IV + G TR+ + F + F ++DT G+
Sbjct: 177 KFSFIGRPNVGKSSLVNAVLQEERVIVSNIEGTTREAV-DTDFVSQTGRPFTMIDTAGIR 235
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A +AI+ S ++ ++D
Sbjct: 236 KRGKVYEN-------------------TEKYSVMR--------ALSAIDRSDIVCLVLDA 268
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKG--IMQV------SEFWSLGFSP- 333
+ G+ D+++A + + +K I++ VNK ++ K + + EF L F+P
Sbjct: 269 ETGIREQDKKVAGYAFE--ANKGIVILVNKWDAVDKSDKLFETFTDDIRREFQYLPFAPI 326
Query: 334 LPISAISGTGTGELLDLV 351
L +SA +G +L +L+
Sbjct: 327 LFVSAKTGQRLAKLPELI 344
>gi|440780870|ref|ZP_20959341.1| GTP-binding protein Der [Clostridium pasteurianum DSM 525]
gi|440221458|gb|ELP60663.1| GTP-binding protein Der [Clostridium pasteurianum DSM 525]
Length = 438
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/197 (41%), Positives = 110/197 (55%), Gaps = 33/197 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L G AIV D PGVTRDR+Y + W + F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAGKRIAIVEDTPGVTRDRIYAEAEWLNNLFTIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P + + +A+M RQA AIE + VI+FLVDG+
Sbjct: 62 ----EPE-------------------SSDIILAQM----RRQAQMAIETADVIVFLVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT AD E+A LRK+ K I+L VNK + EF++LG P+ ISA G
Sbjct: 95 QGLTDADNEVALMLRKS--KKPIVLVVNKIDKLADE-QNSFEFYNLGIGDPVTISASQGL 151
Query: 343 GTGELLDLVCSELKKVE 359
G G++LD + K+++
Sbjct: 152 GLGDMLDKIVGNFKELD 168
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 96/198 (48%), Gaps = 34/198 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++A+VGRPNVGKS+L N+L+G +R IV D PG TRD + E +F+L+DT G+
Sbjct: 178 KIAVVGRPNVGKSSLINKLLGEDRVIVSDIPGTTRDAVDSYLETEEGKFVLIDTAGLRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK + I E ++ T+ AAIE + V I ++D
Sbjct: 238 SKVKEEI-ERYSVIRTL--------------------------AAIERADVCILILDATE 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF-----WSLGFSPLPISAI 339
L+ DE+I + + ++K I++ VNK + K ++ F + L F P
Sbjct: 271 QLSDQDEKIIGYAHE--LNKAIMVIVNKWDLIEKDDKTMNVFKKNIQYKLSFMPYAQYMF 328
Query: 340 SGTGTGELLDLVCSELKK 357
TG+ ++ V E+KK
Sbjct: 329 ISAKTGQRVNKVLEEVKK 346
>gi|365873837|ref|ZP_09413370.1| ribosome-associated GTPase EngA [Thermanaerovibrio velox DSM 12556]
gi|363983924|gb|EHM10131.1| ribosome-associated GTPase EngA [Thermanaerovibrio velox DSM 12556]
Length = 440
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 83/192 (43%), Positives = 110/192 (57%), Gaps = 35/192 (18%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS+LFNRLVG AIV D PGVTRDR+Y + W F LVDTGG +
Sbjct: 4 VAIVGRPNVGKSSLFNRLVGKKLAIVEDIPGVTRDRLYAETEWDGKRFYLVDTGG---IE 60
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+ P+ +D I RQ A++E V+IFL+DG+ G
Sbjct: 61 PASPHPFQD--------------------------AIRRQVEIALKECDVVIFLLDGKEG 94
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL--PISAISGTG 343
+TA DE IA+ LR++ K +++A+NK ++P++ V + +SLGF PL IS G
Sbjct: 95 VTAGDEAIAEMLRRS--SKPVVVAMNKIDNPKRED-NVLDAYSLGF-PLVMGISVEHGIN 150
Query: 344 TGELLDLVCSEL 355
G+LLD V S L
Sbjct: 151 MGDLLDAVASSL 162
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 94/197 (47%), Gaps = 38/197 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R +IVGRPNVGKS+LFNRL+G RA+V PG TRD + W + +F ++DT G+
Sbjct: 176 RFSIVGRPNVGKSSLFNRLIGEERAVVSPIPGTTRDTVDVDFQWNQLKFRIMDTAGLRRK 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
S+ + +E ++ T+ AI+ S V + L+D
Sbjct: 236 SRVDDS-LEYYSVVRTL--------------------------KAIDRSHVALLLMDASE 268
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCE--SPRKGIMQ------VSEFWSLGFSPLP- 335
LT D+ + L K +++ VNK + +P + + E +L ++P+
Sbjct: 269 MLTEQDKRLM--LHVEERGKGLVIGVNKWDLLTPSEDLGDRIRDRIRDELPTLSYAPMVF 326
Query: 336 ISAISGTGTGELLDLVC 352
+SA +G G ++ +L+
Sbjct: 327 LSAKTGRGIQKVPELIA 343
>gi|251781814|ref|YP_002996116.1| GTP-binding protein EngA [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|386316339|ref|YP_006012503.1| GTP-binding protein EngA [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
gi|410494127|ref|YP_006903973.1| GTP-binding protein engA [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
gi|417753429|ref|ZP_12401554.1| ribosome biogenesis GTPase Der [Streptococcus dysgalactiae subsp.
equisimilis SK1249]
gi|417927615|ref|ZP_12571003.1| ribosome-associated GTPase EngA [Streptococcus dysgalactiae subsp.
equisimilis SK1250]
gi|242390443|dbj|BAH80902.1| GTP-binding protein [Streptococcus dysgalactiae subsp. equisimilis
GGS_124]
gi|323126626|gb|ADX23923.1| GTP-binding protein EngA [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
gi|333770187|gb|EGL47242.1| ribosome biogenesis GTPase Der [Streptococcus dysgalactiae subsp.
equisimilis SK1249]
gi|340765489|gb|EGR88015.1| ribosome-associated GTPase EngA [Streptococcus dysgalactiae subsp.
equisimilis SK1250]
gi|410439287|emb|CCI61915.1| GTP-binding protein engA [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
Length = 436
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 109/200 (54%), Gaps = 34/200 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 2 VLPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRQFSLIDTGGI 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+V A I+ QA A+EE+ VI+F+V
Sbjct: 62 DDVD------------------------------APFMEQIKHQAQIAMEEADVIVFVVS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE ++ L + + +ILAVNK ++P + +F+SLG P P+S++
Sbjct: 92 GKEGVTDADEYVSKILYRT--NTPVILAVNKVDNPEMR-NDIYDFYSLGLGDPYPVSSVH 148
Query: 341 GTGTGELLDLVCSELKKVEV 360
G GTG++LD + L EV
Sbjct: 149 GIGTGDVLDAIVENLPVEEV 168
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 91/197 (46%), Gaps = 39/197 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
R +++GRPNVGKS+L N ++G +R I G TRD + + EF ++DT G+
Sbjct: 176 RFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTHFTDADGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKIYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVINAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPLP 335
G+ D+ IA + + K +I+ VNK ++ K V+ +F L ++P+
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGMIIVVNKWDTIDKDNHTVAQWEADIRDQFQFLAYAPII 326
Query: 336 -ISAISGTGTGELLDLV 351
+SA++ +L +L+
Sbjct: 327 FVSALTKQRLNKLPELI 343
>gi|417918180|ref|ZP_12561732.1| ribosome-associated GTPase EngA [Streptococcus parasanguinis SK236]
gi|342828635|gb|EGU63001.1| ribosome-associated GTPase EngA [Streptococcus parasanguinis SK236]
Length = 436
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 108/194 (55%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATAEWLNRKFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE + L K + K +ILAVNK ++P + +F++LG PLP+S++ G
Sbjct: 93 KEGITDADEYVTRILYKTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGEPLPVSSVHG 149
Query: 342 TGTGELLDLVCSEL 355
GTG++LD + L
Sbjct: 150 IGTGDVLDAIIENL 163
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 39/197 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + + EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTHFTDADGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKIYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVINAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPLP 335
G+ D+ IA + + K +I+ VNK ++ K + +F L ++P+
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGMIIVVNKWDTIEKDNHTMKQWEDDIRDQFQYLSYAPIV 326
Query: 336 -ISAISGTGTGELLDLV 351
+SA++ +L D++
Sbjct: 327 FVSALTKQRLHKLPDMI 343
>gi|288801362|ref|ZP_06406816.1| ribosome-associated GTPase EngA [Prevotella sp. oral taxon 299 str.
F0039]
gi|288331745|gb|EFC70229.1| ribosome-associated GTPase EngA [Prevotella sp. oral taxon 299 str.
F0039]
Length = 437
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 83/192 (43%), Positives = 106/192 (55%), Gaps = 33/192 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRL AIV D G TRDR YG+ W EF +VDTGG + S
Sbjct: 5 VAIVGRPNVGKSTLFNRLTKTRSAIVSDTAGTTRDRQYGKVDWNGREFSIVDTGGWVVNS 64
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+ +I ED I RQ A EE+ +++F+VD Q G
Sbjct: 65 E---DIFED--------------------------AIRRQVLIATEEANLVLFVVDVQTG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
LT DE++A LRK+ + IIL VNK + + +EF+SLG P IS+ +G+GT
Sbjct: 96 LTDWDEDVAQILRKSKVP--IILVVNKVDKNEQQ-YDAAEFYSLGLGEPFCISSSTGSGT 152
Query: 345 GELLDLVCSELK 356
G+LLD V + LK
Sbjct: 153 GDLLDEVINNLK 164
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 29/155 (18%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
E +PR A+VGRPN GKS++ N +G +R IV + G TRD +Y R +F LVDT
Sbjct: 172 EDGIPRFAVVGRPNAGKSSIINAFMGEDRNIVTEIAGTTRDSIYTRFDKFGFDFYLVDTA 231
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G+ + + + EDL + + ++ AIE S V I +
Sbjct: 232 GI----RRKNKVTEDLEFYSVM-----------------------RSIRAIENSDVCILM 264
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
+D G+ D I +++N +K +++ VNK +
Sbjct: 265 IDATRGIETQDMNIFQLIQRN--NKSLVVVVNKWD 297
>gi|304382194|ref|ZP_07364702.1| ribosome-associated GTPase EngA [Prevotella marshii DSM 16973]
gi|304336659|gb|EFM02887.1| ribosome-associated GTPase EngA [Prevotella marshii DSM 16973]
Length = 437
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/192 (42%), Positives = 105/192 (54%), Gaps = 35/192 (18%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGG-VLNV 224
VAIVGRPNVGKS LFNRL RAIV DE G TRDR YG+ W EF +VDTGG V+N
Sbjct: 5 VAIVGRPNVGKSTLFNRLTKSRRAIVSDEAGTTRDRQYGKCEWNGREFSVVDTGGWVVN- 63
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+I ED I +Q A EE+ +++FLVD
Sbjct: 64 ---SDDIFED--------------------------AIRKQVIVATEEADLVLFLVDITN 94
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTG 343
GLT DE++A LR+ + +IL NK +S + I +EF+ LG P ISA +G+G
Sbjct: 95 GLTDWDEDVAKILRRAKLP--VILVANKADSNEQ-IYDAAEFYRLGLGDPYCISAATGSG 151
Query: 344 TGELLDLVCSEL 355
TG+LLD V ++
Sbjct: 152 TGDLLDFVLQKM 163
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 75/155 (48%), Gaps = 29/155 (18%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
E +PR A+VGRPN GKS++ N +G +R IV + G TRD +Y R +F LVDT
Sbjct: 172 EDGIPRFAVVGRPNAGKSSIINAFIGEDRNIVTEIAGTTRDSIYTRYDKFGFDFYLVDTA 231
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G+ + + + EDL + + ++ AIE S V I +
Sbjct: 232 GI----RRKNKVTEDLEFYSVM-----------------------RSIRAIENSDVCILM 264
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
+D G+ A D I ++KN K +++ VNK +
Sbjct: 265 LDATRGIEAQDMNIFQLIQKN--SKSLVVVVNKWD 297
>gi|50365015|ref|YP_053440.1| GTP-binding protein EngA [Mesoplasma florum L1]
gi|81695689|sp|Q6F1R7.1|DER_MESFL RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|50363571|gb|AAT75556.1| GTP-binding protein, cell cycle control [Mesoplasma florum L1]
Length = 435
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 81/191 (42%), Positives = 108/191 (56%), Gaps = 34/191 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS+LFNR++ ++IV D PGVTRDR+YG + W EF+++DTGG
Sbjct: 6 VAIVGRPNVGKSSLFNRIIREKKSIVEDTPGVTRDRIYGTAEWLTREFIVIDTGG----- 60
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
I +E P A I+ QA A+EE+ VI+FL++ Q G
Sbjct: 61 ---------------ITLEDQPFAKE----------IKVQAEIAMEEADVIVFLLNHQEG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
L+ D+ IA L K K I+LAVNK + Q E+ SLGF P+ ISA G GT
Sbjct: 96 LSDEDKMIAKILYKT--KKPIVLAVNKYDKKTSDFDQY-EYMSLGFGEPILISATHGIGT 152
Query: 345 GELLDLVCSEL 355
G+LLD + ++
Sbjct: 153 GDLLDDIIHQM 163
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
RV+I+GRPNVGKS+L N L+G R IV D PG T D + E+ L+DT G+
Sbjct: 176 RVSIIGRPNVGKSSLVNSLIGEERMIVSDIPGTTLDAVDSVVKVNNIEYTLIDTAGIRKK 235
Query: 225 SKSQPNI--MEDLAITTTIGMEGIPLATREAAV 255
SK N+ L TTI + L +A+V
Sbjct: 236 SKIFQNVEKYSYLRSLTTINGSDVVLLMLDASV 268
>gi|312869092|ref|ZP_07729266.1| ribosome biogenesis GTPase Der [Lactobacillus oris PB013-T2-3]
gi|417885441|ref|ZP_12529595.1| ribosome biogenesis GTPase Der [Lactobacillus oris F0423]
gi|311095338|gb|EFQ53608.1| ribosome biogenesis GTPase Der [Lactobacillus oris PB013-T2-3]
gi|341595363|gb|EGS38012.1| ribosome biogenesis GTPase Der [Lactobacillus oris F0423]
Length = 437
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 109/193 (56%), Gaps = 34/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNR+ G +IV D PGVTRDR+Y W F ++DTGG
Sbjct: 4 PVVAIVGRPNVGKSTLFNRIAGERISIVEDTPGVTRDRIYAHGEWLGKNFNMIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I + PL T+ I +QA AI+E+ VI+ +VD +
Sbjct: 61 -----------------IELSDQPLLTQ----------IRQQAEIAIDEADVIVLVVDVE 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
+G+T ADE++A L ++ +K ++LAVNK ++P + + +F+SLG P P+S++ G
Sbjct: 94 SGVTDADEQVARILYRS--NKPVVLAVNKVDNPERR-NDIYDFYSLGLGEPYPVSSVHGV 150
Query: 343 GTGELLDLVCSEL 355
G G+LLD V
Sbjct: 151 GLGDLLDAVIHNF 163
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 30/152 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
R +++GRPNVGKS+L N ++G NR IV + G TRD + R + EF ++DT G+
Sbjct: 176 RFSLIGRPNVGKSSLVNGILGENRVIVSNMAGTTRDAINTRFVAKDGQEFTMIDTAGI-- 233
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ Q I E+ T A+ R A AI+ S V++ +++ +
Sbjct: 234 --RKQGKIYEN---------------TERYALMR--------AMRAIDGSDVVLVVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCES 315
G+ D+ IA + + +I+ VNK ++
Sbjct: 269 EGIREIDKHIAGYAHEAGCG--VIIVVNKWDT 298
>gi|312868488|ref|ZP_07728688.1| ribosome biogenesis GTPase Der [Streptococcus parasanguinis F0405]
gi|322390089|ref|ZP_08063624.1| ribosome-associated GTPase EngA [Streptococcus parasanguinis ATCC
903]
gi|337282538|ref|YP_004622009.1| ribosome-associated GTPase EngA [Streptococcus parasanguinis ATCC
15912]
gi|387880090|ref|YP_006310393.1| GTP-binding protein EngA [Streptococcus parasanguinis FW213]
gi|414156064|ref|ZP_11412373.1| GTPase Der [Streptococcus sp. F0442]
gi|419800310|ref|ZP_14325596.1| ribosome-associated GTPase EngA [Streptococcus parasanguinis F0449]
gi|311096233|gb|EFQ54477.1| ribosome biogenesis GTPase Der [Streptococcus parasanguinis F0405]
gi|321143216|gb|EFX38659.1| ribosome-associated GTPase EngA [Streptococcus parasanguinis ATCC
903]
gi|335370131|gb|AEH56081.1| ribosome-associated GTPase EngA [Streptococcus parasanguinis ATCC
15912]
gi|385695470|gb|EIG26030.1| ribosome-associated GTPase EngA [Streptococcus parasanguinis F0449]
gi|386793540|gb|AFJ26575.1| GTP-binding protein EngA [Streptococcus parasanguinis FW213]
gi|410872273|gb|EKS20217.1| GTPase Der [Streptococcus sp. F0442]
Length = 436
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 108/194 (55%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F ++DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATAEWLNRKFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE + L K + K +ILAVNK ++P + +F++LG PLP+S++ G
Sbjct: 93 KEGITDADEYVTRILYKTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGEPLPVSSVHG 149
Query: 342 TGTGELLDLVCSEL 355
GTG++LD + L
Sbjct: 150 IGTGDVLDAIIENL 163
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 30/155 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + + EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTHFTDADGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKIYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVINAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+ D+ IA + + K +I+ VNK ++ K
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGMIIVVNKWDTIEK 301
>gi|359406189|ref|ZP_09198899.1| ribosome biogenesis GTPase Der [Prevotella stercorea DSM 18206]
gi|357556661|gb|EHJ38247.1| ribosome biogenesis GTPase Der [Prevotella stercorea DSM 18206]
Length = 437
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 82/192 (42%), Positives = 109/192 (56%), Gaps = 33/192 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRL +AIV D G TRDR YG+ W EF +VDTGG V
Sbjct: 5 VAIVGRPNVGKSTLFNRLTKTRQAIVSDTAGTTRDRQYGKCEWNGREFSVVDTGGW--VV 62
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
KS +I ED I +Q A EE+ V++F+VD Q G
Sbjct: 63 KSD-DIFED--------------------------AIRKQVIVATEEADVVLFVVDVQTG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
LT D+++A LR+ + +IL NK ++ + I +EF++LG P IS+ +G+GT
Sbjct: 96 LTDWDQDVATILRRTKLP--VILVANKTDNNDQ-IYDAAEFYALGLGEPQCISSATGSGT 152
Query: 345 GELLDLVCSELK 356
G+LLDLV ++LK
Sbjct: 153 GDLLDLVLTKLK 164
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 76/155 (49%), Gaps = 29/155 (18%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
E +PR A+VGRPN GKS++ N +G +R IV + G TRD +Y R +F LVDT
Sbjct: 172 EDGIPRFAVVGRPNAGKSSIINAFIGEDRNIVTEIAGTTRDSIYTRYDKFGFDFYLVDTA 231
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G+ + + + EDL + + ++ AIE S V I +
Sbjct: 232 GI----RRKNKVSEDLEFYSVM-----------------------RSIRAIENSDVCILM 264
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
+D G+ A D I +++N +K +++ VNK +
Sbjct: 265 LDATRGIEAQDMNIFQLIQRN--NKSLVVVVNKWD 297
>gi|212212370|ref|YP_002303306.1| GTP-binding protein EngA [Coxiella burnetii CbuG_Q212]
gi|238058972|sp|B6IZN3.1|DER_COXB2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|212010780|gb|ACJ18161.1| GTP-binding protein [Coxiella burnetii CbuG_Q212]
Length = 443
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 84/195 (43%), Positives = 104/195 (53%), Gaps = 33/195 (16%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP +AIVGRPNVGKS LFN L A+V D PGVTRDR YG + +LVDTGG+
Sbjct: 1 MLPVIAIVGRPNVGKSTLFNYLTKSRAALVADVPGVTRDRQYGETTIDSQRLLLVDTGGL 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
++ T E PLA E Q AI+ES I+FLVD
Sbjct: 61 VD----------------TENKEVAPLA-------------ETQVEQAIDESDCILFLVD 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
+AGL ADE IA+ L K K I LAVNK + R ++Q S+F+ LGF P I+A S
Sbjct: 92 AKAGLVPADEIIAERLHKK--GKKIFLAVNKADRARAAVVQ-SDFYKLGFGEPYVIAAAS 148
Query: 341 GTGTGELLDLVCSEL 355
G G +L+ V L
Sbjct: 149 GRGVKDLMTQVLENL 163
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 44/206 (21%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++A++GRPNVGKS L NRL+G R IV D+PG TRD +Y + + L+DT G+
Sbjct: 177 KIAMIGRPNVGKSTLINRLLGEERVIVYDQPGTTRDSIYIPFARNDENYTLIDTAGIRRR 236
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+K Q + +E SMI ++ A+ + V+IFL+D +
Sbjct: 237 AKIQ-DYVEKF------------------------SMI--KSLQAMHAADVVIFLLDARQ 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKC--------ESPRKGI---MQVSEFWSLGFSP 333
G+T D + + + + + +I+AVNK ++ R I M +F F
Sbjct: 270 GVTEQDLRLLNRIVEAGVS--LIIAVNKWDGLNIEERDNVRNAIDRRMPFVDFARRYF-- 325
Query: 334 LPISAISGTGTGELLDLVCSELKKVE 359
ISA+ GTG G+L + + ++
Sbjct: 326 --ISALHGTGVGKLFRAIQESYQSIQ 349
>gi|372221087|ref|ZP_09499508.1| GTP-binding protein Der [Mesoflavibacter zeaxanthinifaciens S86]
Length = 433
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 82/195 (42%), Positives = 111/195 (56%), Gaps = 33/195 (16%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS FNRL+ AIV GVTRDR YG+S W EF L+DTGG +
Sbjct: 5 VAIVGRPNVGKSTFFNRLIQRREAIVDAVSGVTRDRHYGKSDWNGKEFSLIDTGGYV--- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
IG E I I++Q AI+E+ IIF+VD ++G
Sbjct: 62 ---------------IGSEDI-----------FEQEIDKQVELAIDEADAIIFMVDVESG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP-LPISAISGTGT 344
+T DE++A+ LRK +DK + LAVNK ++ ++ V EF++LG IS+I+G+G+
Sbjct: 96 VTGMDEDVANLLRK--VDKPVFLAVNKVDNAQREADAV-EFYALGLGEYFTISSINGSGS 152
Query: 345 GELLDLVCSELKKVE 359
GELLD + L + E
Sbjct: 153 GELLDALVEVLPETE 167
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 75/167 (44%), Gaps = 29/167 (17%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
E LPR A+VGRPN GKS+ N L+G +R IV D G TRD + + EF LVDT
Sbjct: 170 EDELPRFAVVGRPNAGKSSFINALIGEDRYIVTDIAGTTRDSIDTKYNRFGFEFNLVDTA 229
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G+ + + + EDL + + ++ AIE V I +
Sbjct: 230 GI----RRKAKVKEDLEFYSVM-----------------------RSVRAIEHCDVCILM 262
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
+D G + I WL + +K I++ VNK + K V ++
Sbjct: 263 LDATRGFDGQVQNIF-WLAQR-NNKGIVILVNKWDKVDKETNSVRDY 307
>gi|15894988|ref|NP_348337.1| GTP-binding protein EngA [Clostridium acetobutylicum ATCC 824]
gi|337736929|ref|YP_004636376.1| GTP-binding protein EngA [Clostridium acetobutylicum DSM 1731]
gi|384458436|ref|YP_005670856.1| GTP-binding protein EngA [Clostridium acetobutylicum EA 2018]
gi|26006729|sp|Q97ID7.1|DER_CLOAB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|15024676|gb|AAK79677.1|AE007680_10 Predicted GTPase [Clostridium acetobutylicum ATCC 824]
gi|325509125|gb|ADZ20761.1| GTP-binding protein EngA [Clostridium acetobutylicum EA 2018]
gi|336292799|gb|AEI33933.1| GTP-binding protein EngA [Clostridium acetobutylicum DSM 1731]
Length = 438
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 81/194 (41%), Positives = 108/194 (55%), Gaps = 33/194 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P V IVGRPNVGKS LFN+L G +IV D PGVTRDR+Y S W +F ++DTGG+
Sbjct: 4 PLVTIVGRPNVGKSTLFNKLAGKRVSIVEDTPGVTRDRIYAESEWVGKKFTIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P D+ +T + RQA AIE S VIIF+VDG+
Sbjct: 62 ----EPE-NNDIILT----------------------QMRRQAQIAIEMSDVIIFMVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT D E+A LRK+ K I+L VNK + + + EF++LG P+ IS+ G
Sbjct: 95 QGLTDTDNEVAIMLRKS--KKPIVLVVNKIDKNVEE-NNIYEFYNLGIGDPVSISSSQGL 151
Query: 343 GTGELLDLVCSELK 356
G G++LD V ++ K
Sbjct: 152 GIGDMLDEVVNKFK 165
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 95/201 (47%), Gaps = 40/201 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRM--YGRSFWGEHEFMLVDTGGVL 222
++A VG+PNVGKS+L NR++G R IV D PG TRD + + + +G + +L+DT G+
Sbjct: 178 KIAFVGKPNVGKSSLTNRILGEERVIVSDIPGTTRDAIDSFLETDFG--KLVLIDTAGLR 235
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
S+ + I R +AV M AAIE V ++D
Sbjct: 236 RKSRIKEEI------------------ERYSAVRTM---------AAIERCDVCTLILDA 268
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSEFWSLGFSPL---PI 336
++ DE I + +N +K I++ VNK E K + + + FS + P
Sbjct: 269 TEPISEQDERIIGYAHEN--NKAILVIVNKWDLIEKDDKTMENFKKNLEMKFSFMAYAPF 326
Query: 337 SAISGTGTGELLDLVCSELKK 357
IS TG+ + V SE+KK
Sbjct: 327 LFISAK-TGQRVHKVLSEIKK 346
>gi|358635852|dbj|BAL23149.1| GTP-binding protein [Azoarcus sp. KH32C]
Length = 442
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 108/193 (55%), Gaps = 33/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P + +VGRPNVGKS LFNRL A+V D+PG+TRDR YG GE ++++VDT G
Sbjct: 3 PTIVLVGRPNVGKSTLFNRLTRTRDALVADQPGLTRDRHYGIGRVGERDYLVVDTAGFDP 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
V+K+ IM ++A RQA AI E+ ++FLVDG+
Sbjct: 63 VAKT--GIMHEMA---------------------------RQAEQAIAEADALLFLVDGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT DE+IA+ LR+ + + L VNK E + I+ +EF +LG PLPISA G
Sbjct: 94 MGLTPHDEQIAERLRR--AGRPVHLIVNKSEGMDRAIV-AAEFHALGLGDPLPISAAHGD 150
Query: 343 GTGELLDLVCSEL 355
G +L+D V +E
Sbjct: 151 GVKQLVDHVLAEF 163
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 89/195 (45%), Gaps = 36/195 (18%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
PR+AIVGRPNVGKS L N L+G R I D PG TRD + G ++ L+DT G+
Sbjct: 177 PRIAIVGRPNVGKSTLVNSLLGEERVIAFDMPGTTRDAIAIPFERGGRDYTLIDTAGLRR 236
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K I E ++ T+ AIE++ V + ++D
Sbjct: 237 RGKVFEAI-EKFSVIKTL--------------------------QAIEQANVAVLVLDAS 269
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESP---RKGIMQVSEFWSLGFSPLP----I 336
++ D IA ++ + + +++AVNK +S R+ +++ LGF I
Sbjct: 270 QDISDQDAHIAGFILDS--GRALVVAVNKWDSVDDYRRELIKRDIAHKLGFLSFARFHYI 327
Query: 337 SAISGTGTGELLDLV 351
SA+ G G ++ V
Sbjct: 328 SALKGAGVAAVMKSV 342
>gi|226312035|ref|YP_002771929.1| GTP-binding protein EngA [Brevibacillus brevis NBRC 100599]
gi|254783139|sp|C0ZCB6.1|DER_BREBN RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|226094983|dbj|BAH43425.1| GTP-binding protein EngA [Brevibacillus brevis NBRC 100599]
Length = 437
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 77/194 (39%), Positives = 104/194 (53%), Gaps = 33/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS +FNRL+G AIV D PGVTRDR+YG+ W H F ++DTGG
Sbjct: 3 LPVVAIVGRPNVGKSTIFNRLIGERVAIVEDMPGVTRDRLYGKGEWLTHTFHVIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I + + +M QA AI+E+ VII + D
Sbjct: 61 -----------------------IEFGETDEILTQM----RYQAELAIDEADVIIMIADS 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T AD E++ L N K ++LAVNK ++P + +F+SLG P P+S G
Sbjct: 94 RTGVTDADVELSRML--NRTGKPVVLAVNKADNPEMR-ADIYDFYSLGLGEPFPVSGSHG 150
Query: 342 TGTGELLDLVCSEL 355
G G++L+ VC
Sbjct: 151 LGLGDMLEEVCQHF 164
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 88/178 (49%), Gaps = 37/178 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
RV+I+GRPNVGKS+L N ++G R IV + G TRD + + ++LVDT G+
Sbjct: 178 RVSIIGRPNVGKSSLTNAILGEERVIVSEVAGTTRDAIDTPFERDDQSYVLVDTAGM--- 234
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E T + +V R A +IE+S V++ +++G+
Sbjct: 235 -RKRGKVYE---------------TTEKYSVMR--------AMRSIEDSDVVLVVINGEE 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRK--GIMQ------VSEFWSLGFSPL 334
G+ D++IA + + + +I+ VNK ++ K MQ EF L ++P+
Sbjct: 271 GIIEQDKKIAGYAHE--AGRGVIIIVNKWDAIEKDDKTMQRFTELIREEFKYLDYAPI 326
>gi|251796400|ref|YP_003011131.1| GTP-binding protein EngA [Paenibacillus sp. JDR-2]
gi|247544026|gb|ACT01045.1| small GTP-binding protein [Paenibacillus sp. JDR-2]
Length = 440
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 114/197 (57%), Gaps = 33/197 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNR+VG AIV D+PGVTRDR+Y W F +VDTGG+
Sbjct: 4 PVIAIVGRPNVGKSTIFNRVVGDRLAIVEDKPGVTRDRLYSPGEWNGKAFSIVDTGGIE- 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ IM+ + RM QA AIEE+ VIIF+ D +
Sbjct: 63 -IDGEDEIMKSV---------------------RM------QAELAIEEADVIIFMCDAK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGT 342
G+T AD+E+A L +++ K ++LAVNK ++ + + ++ EF+ LGF +P+ +S G
Sbjct: 95 TGVTHADDEVAQMLFRSH--KPVVLAVNKVDNLNR-MDEIYEFYGLGFGTPIAVSGSHGL 151
Query: 343 GTGELLDLVCSELKKVE 359
G G++LD +L ++E
Sbjct: 152 GIGDMLDAAIEKLPELE 168
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 78/162 (48%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
RVA++GRPNVGKS+L N L+G R IV + G TRD + +++L+DT G+
Sbjct: 178 RVALIGRPNVGKSSLVNALLGEERVIVSNVAGTTRDAIDTPFERDGQKYVLIDTAGM--- 234
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE + V++ L++G+
Sbjct: 235 -RKRGKVYE---------------STEKYSVMR--------ALKAIERADVVLVLINGEE 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ IA + + K I VNK + K + EF
Sbjct: 271 GIIEQDKHIAGYAHE--AGKASIFVVNKWDVVDKDDKTMQEF 310
>gi|94993678|ref|YP_601776.1| GTP-binding protein EngA [Streptococcus pyogenes MGAS10750]
gi|166225863|sp|Q1JIH4.1|DER_STRPD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|166225864|sp|Q1J8C9.1|DER_STRPF RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|94543301|gb|ABF33349.1| GTP-binding protein [Streptococcus pyogenes MGAS10270]
gi|94547186|gb|ABF37232.1| GTP-binding protein [Streptococcus pyogenes MGAS10750]
Length = 436
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 76/195 (38%), Positives = 107/195 (54%), Gaps = 34/195 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 2 VLPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRQFSLIDTGGI 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+V A I+ QA A+EE+ VI+F+V
Sbjct: 62 DDVD------------------------------APFMEQIKHQAQIAMEEADVIVFVVS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE ++ L + + +ILAVNK ++P + +F+SLG P P+S++
Sbjct: 92 GKEGVTDADEYVSKILYRT--NTPVILAVNKVDNPEMR-NDIYDFYSLGLGDPYPVSSVH 148
Query: 341 GTGTGELLDLVCSEL 355
G GTG++LD + L
Sbjct: 149 GIGTGDVLDAIVENL 163
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 91/197 (46%), Gaps = 39/197 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
R +++GRPNVGKS+L N ++G +R I G TRD + + EF ++DT G+
Sbjct: 176 RFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTHFTDADGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKIYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVINAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPLP 335
G+ D+ IA + + K +I+ VNK ++ K V+ +F L ++P+
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGMIIVVNKWDTLDKDNHTVAKWEADIRDQFQFLTYAPII 326
Query: 336 -ISAISGTGTGELLDLV 351
+SA++ +L DL+
Sbjct: 327 FVSALTKQRLNKLPDLI 343
>gi|15674498|ref|NP_268672.1| GTP-binding protein EngA [Streptococcus pyogenes SF370]
gi|19745453|ref|NP_606589.1| GTP-binding protein EngA [Streptococcus pyogenes MGAS8232]
gi|50913661|ref|YP_059633.1| GTP-binding protein EngA [Streptococcus pyogenes MGAS10394]
gi|56808746|ref|ZP_00366464.1| COG1160: Predicted GTPases [Streptococcus pyogenes M49 591]
gi|71910101|ref|YP_281651.1| GTP-binding protein EngA [Streptococcus pyogenes MGAS5005]
gi|94987918|ref|YP_596019.1| GTP-binding protein EngA [Streptococcus pyogenes MGAS9429]
gi|94991802|ref|YP_599901.1| GTP-binding protein EngA [Streptococcus pyogenes MGAS2096]
gi|209558845|ref|YP_002285317.1| GTP-binding protein EngA [Streptococcus pyogenes NZ131]
gi|383479473|ref|YP_005388367.1| GTP-binding protein EngA [Streptococcus pyogenes MGAS15252]
gi|383493397|ref|YP_005411073.1| GTP-binding protein EngA [Streptococcus pyogenes MGAS1882]
gi|410679974|ref|YP_006932376.1| ribosome-associated GTPase EngA [Streptococcus pyogenes A20]
gi|417857486|ref|ZP_12502545.1| GTP-binding protein Der [Streptococcus pyogenes HKU QMH11M0907901]
gi|421891975|ref|ZP_16322703.1| GTP-binding protein EngA [Streptococcus pyogenes NS88.2]
gi|54037054|sp|P64065.1|DER_STRP8 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|54040977|sp|P64064.1|DER_STRP1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|68052093|sp|Q5XDR3.1|DER_STRP6 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|166225861|sp|Q1JDF1.1|DER_STRPB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|166225862|sp|Q1JNC4.1|DER_STRPC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|238058978|sp|B5XJW0.1|DER_STRPZ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|13621599|gb|AAK33393.1| putative phosphoglycerate dehydrogenase [Streptococcus pyogenes M1
GAS]
gi|19747567|gb|AAL97088.1| putative phosphoglycerate dehydrogenase [Streptococcus pyogenes
MGAS8232]
gi|50902735|gb|AAT86450.1| GTP-binding protein [Streptococcus pyogenes MGAS10394]
gi|71852883|gb|AAZ50906.1| GTP-binding protein [Streptococcus pyogenes MGAS5005]
gi|94541426|gb|ABF31475.1| GTP-binding protein [Streptococcus pyogenes MGAS9429]
gi|94545310|gb|ABF35357.1| GTP-binding protein [Streptococcus pyogenes MGAS2096]
gi|209540046|gb|ACI60622.1| GTP-binding protein EngA [Streptococcus pyogenes NZ131]
gi|378927463|gb|AFC65669.1| GTP-binding protein EngA [Streptococcus pyogenes MGAS15252]
gi|378929125|gb|AFC67542.1| GTP-binding protein EngA [Streptococcus pyogenes MGAS1882]
gi|379982273|emb|CCG26425.1| GTP-binding protein EngA [Streptococcus pyogenes NS88.2]
gi|387934441|gb|EIK42554.1| GTP-binding protein Der [Streptococcus pyogenes HKU QMH11M0907901]
gi|395453346|dbj|BAM29685.1| GTP-binding protein [Streptococcus pyogenes M1 476]
gi|409692563|gb|AFV37423.1| ribosome-associated GTPase EngA [Streptococcus pyogenes A20]
Length = 436
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 76/195 (38%), Positives = 107/195 (54%), Gaps = 34/195 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 2 VLPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRQFSLIDTGGI 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+V A I+ QA A+EE+ VI+F+V
Sbjct: 62 DDVD------------------------------APFMEQIKHQAQIAMEEADVIVFVVS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE ++ L + + +ILAVNK ++P + +F+SLG P P+S++
Sbjct: 92 GKEGVTDADEYVSKILYRT--NTPVILAVNKVDNPEMR-NDIYDFYSLGLGDPYPVSSVH 148
Query: 341 GTGTGELLDLVCSEL 355
G GTG++LD + L
Sbjct: 149 GIGTGDVLDAIVENL 163
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 91/197 (46%), Gaps = 39/197 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
R +++GRPNVGKS+L N ++G +R I G TRD + + EF ++DT G+
Sbjct: 176 RFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTHFTDADGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKIYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVINAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPLP 335
G+ D+ IA + + K +I+ VNK ++ K V+ +F L ++P+
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGMIIVVNKWDTIDKDNHTVAKWEADIRDQFQFLTYAPII 326
Query: 336 -ISAISGTGTGELLDLV 351
+SA++ +L DL+
Sbjct: 327 FVSALTKQRLNKLPDLI 343
>gi|125973539|ref|YP_001037449.1| GTP-binding protein EngA [Clostridium thermocellum ATCC 27405]
gi|256003357|ref|ZP_05428348.1| small GTP-binding protein [Clostridium thermocellum DSM 2360]
gi|281417743|ref|ZP_06248763.1| ribosome-associated GTPase EngA [Clostridium thermocellum JW20]
gi|385778540|ref|YP_005687705.1| ribosome-associated GTPase EngA [Clostridium thermocellum DSM 1313]
gi|419723631|ref|ZP_14250746.1| GTP-binding protein engA [Clostridium thermocellum AD2]
gi|419724544|ref|ZP_14251606.1| GTP-binding protein engA [Clostridium thermocellum YS]
gi|166224331|sp|A3DE77.1|DER_CLOTH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|125713764|gb|ABN52256.1| ribosome-associated GTPase EngA [Clostridium thermocellum ATCC
27405]
gi|255992647|gb|EEU02738.1| small GTP-binding protein [Clostridium thermocellum DSM 2360]
gi|281409145|gb|EFB39403.1| ribosome-associated GTPase EngA [Clostridium thermocellum JW20]
gi|316940220|gb|ADU74254.1| ribosome-associated GTPase EngA [Clostridium thermocellum DSM 1313]
gi|380772091|gb|EIC05949.1| GTP-binding protein engA [Clostridium thermocellum YS]
gi|380780313|gb|EIC09996.1| GTP-binding protein engA [Clostridium thermocellum AD2]
Length = 440
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/187 (42%), Positives = 106/187 (56%), Gaps = 32/187 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS FN LVG +IV D PGVTRDR+Y W +F L+DTGG+
Sbjct: 4 PVVAVVGRPNVGKSTFFNYLVGKRISIVEDTPGVTRDRIYAEVEWRNKKFTLIDTGGIEP 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
S+ + IM+ + +RQA AIE + +IIF+VD +
Sbjct: 64 YSEDK--IMQQM---------------------------KRQAEIAIETADIIIFMVDVK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGT 342
G+TA+D+E+A LRK K +I+AVNK + + EF++LGF L IS+I G
Sbjct: 95 DGVTASDKEVATLLRKT--KKPVIVAVNKVDKIGELPADFYEFYNLGFGELMAISSIHGL 152
Query: 343 GTGELLD 349
G G+LLD
Sbjct: 153 GMGDLLD 159
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 95/201 (47%), Gaps = 38/201 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEH-EFMLVDTGGVLN 223
+VA+VG+PNVGKS+L NR++G R IV D PG TRD + EH +F+ +DT G+
Sbjct: 179 KVAVVGKPNVGKSSLINRILGEERVIVSDIPGTTRDAI-DTFVENEHGKFVFIDTAGI-- 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ Q I E + + I ++ AIE + V + L+D +
Sbjct: 236 --RRQSKINEKIEKYSII-----------------------RSWTAIERADVCLILIDAK 270
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFW-----SLGFSPL-PIS 337
G+T D +IA + + K I+ VNK + K + E+ LGF P+
Sbjct: 271 EGVTEQDTKIAGYAHEQ--GKASIIVVNKWDLIEKQTGTLEEYRRTVHEKLGFMLYAPVI 328
Query: 338 AISGTGTGELLDLVCSELKKV 358
IS TG+ +D + +K V
Sbjct: 329 FISAL-TGQRVDRIYGLIKHV 348
>gi|21909785|ref|NP_664053.1| GTP-binding protein EngA [Streptococcus pyogenes MGAS315]
gi|28896522|ref|NP_802872.1| GTP-binding protein EngA [Streptococcus pyogenes SSI-1]
gi|341958620|sp|P0DA90.1|DER_STRP3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|341958621|sp|P0DA91.1|DER_STRPQ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|21903970|gb|AAM78856.1| putative phosphoglycerate dehydrogenase [Streptococcus pyogenes
MGAS315]
gi|28811776|dbj|BAC64705.1| putative phosphoglycerate dehydrogenase [Streptococcus pyogenes
SSI-1]
Length = 436
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/195 (38%), Positives = 107/195 (54%), Gaps = 34/195 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 2 VLPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRQFSLIDTGGI 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+V A I+ QA A+EE+ VI+F+V
Sbjct: 62 DDVD------------------------------APFMEQIKHQAQIAMEEADVIVFVVS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE ++ L + + +ILAVNK ++P + +F+SLG P P+S++
Sbjct: 92 GKEGVTDADEYVSKILYRT--NTPVILAVNKVDNPEMR-NDIYDFYSLGLGDPYPVSSVH 148
Query: 341 GTGTGELLDLVCSEL 355
G GTG++LD + L
Sbjct: 149 GIGTGDVLDAIVENL 163
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 91/197 (46%), Gaps = 39/197 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
R +++GRPNVGKS+L N ++G +R I G TRD + + EF ++DT G+
Sbjct: 176 RFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTHFTDADGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKIYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVINAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPLP 335
G+ D+ IA + + K +I+ VNK ++ K V+ +F L ++P+
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGMIIVVNKWDAIDKDNHTVAKWEADIRDQFQFLTYAPII 326
Query: 336 -ISAISGTGTGELLDLV 351
+SA++ +L DL+
Sbjct: 327 FVSALTKQRLNKLPDLI 343
>gi|386362151|ref|YP_006071482.1| GTPase Der [Streptococcus pyogenes Alab49]
gi|350276560|gb|AEQ23928.1| GTPase Der [Streptococcus pyogenes Alab49]
Length = 436
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/195 (38%), Positives = 107/195 (54%), Gaps = 34/195 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 2 VLPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRQFSLIDTGGI 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+V A I+ QA A+EE+ VI+F+V
Sbjct: 62 DDVD------------------------------APFMEQIKHQAQIAMEEADVIVFVVS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE ++ L + + +ILAVNK ++P + +F+SLG P P+S++
Sbjct: 92 GKEGVTDADEYVSKILYRT--NTPVILAVNKVDNPEMR-NDIYDFYSLGLGDPYPVSSVH 148
Query: 341 GTGTGELLDLVCSEL 355
G GTG++LD + L
Sbjct: 149 GIGTGDVLDAIVENL 163
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 102/221 (46%), Gaps = 43/221 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
R +++GRPNVGKS+L N ++G +R I G TRD + + EF ++DT G+
Sbjct: 176 RFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTHFTDADGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKIYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVINAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPLP 335
G+ D+ IA + + K +I+ VNK ++ K V+ +F L ++P+
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGMIIVVNKWDAIDKDNHTVAKWEADIRDQFQFLTYAPII 326
Query: 336 -ISAISGTGTGELLDLVC----SELKKVEVCIGFLLICNAI 371
+SA++ +L DL+ S+ K++ + +I +AI
Sbjct: 327 FVSALTKQRLNKLPDLIKRISESQNKRIPSAVFNDVIMDAI 367
>gi|291456800|ref|ZP_06596190.1| ribosome-associated GTPase EngA [Bifidobacterium breve DSM 20213 =
JCM 1192]
gi|291382077|gb|EFE89595.1| ribosome-associated GTPase EngA [Bifidobacterium breve DSM 20213 =
JCM 1192]
Length = 708
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/231 (37%), Positives = 117/231 (50%), Gaps = 37/231 (16%)
Query: 136 DETDDRKDSGKKQKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEP 195
DE D+ SG+ + G P +L AIVGRPNVGKS+L NR++G A+V D P
Sbjct: 248 DEGDEELISGRGFEDGARKSGPKPVGVL---AIVGRPNVGKSSLVNRILGRRAAVVEDTP 304
Query: 196 GVTRDRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAV 255
GVTRDR+ + W +F LVDTGG EA V
Sbjct: 305 GVTRDRVSYDAEWAGTDFKLVDTGGW------------------------------EADV 334
Query: 256 ARMPSMIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCES 315
+ S I QA A+ + ++F+VDGQ G+T DE I LR + K ++LAVNK +
Sbjct: 335 EGIESAIASQAQVAVTLADAVVFVVDGQVGMTTTDERIVKMLRAS--GKPVVLAVNKIDD 392
Query: 316 PRKGIMQVSEFWSLGFS-PLPISAISGTGTGELLDLVCSELKKVEVCIGFL 365
+ +EFW LG P ISA+ G G G+LLD+ +LK+ E G+L
Sbjct: 393 NASEYL-AAEFWKLGLGEPYSISAMHGRGVGDLLDVALGKLKEAEKASGYL 442
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%)
Query: 147 KQKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRS 206
K K+ + G + L RVA+VGRPNVGKS+L N+L RA+V D G TRD +
Sbjct: 431 KLKEAEKASGYLTPSGLRRVALVGRPNVGKSSLLNQLAHSERAVVNDLAGTTRDPVDEIV 490
Query: 207 FWGEHEFMLVDTGGV 221
+++ +DT G+
Sbjct: 491 DIDGEDWLFIDTAGI 505
>gi|213692049|ref|YP_002322635.1| bifunctional cytidylate kinase/GTP-binding protein [Bifidobacterium
longum subsp. infantis ATCC 15697 = JCM 1222]
gi|384199209|ref|YP_005584952.1| GTP-binding protein [Bifidobacterium longum subsp. infantis ATCC
15697 = JCM 1222]
gi|213523510|gb|ACJ52257.1| small GTP-binding protein [Bifidobacterium longum subsp. infantis
ATCC 15697 = JCM 1222]
gi|320458161|dbj|BAJ68782.1| GTP-binding protein [Bifidobacterium longum subsp. infantis ATCC
15697 = JCM 1222]
Length = 709
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/231 (38%), Positives = 116/231 (50%), Gaps = 37/231 (16%)
Query: 136 DETDDRKDSGKKQKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEP 195
DE D+ SG+ + G P +L AIVGRPNVGKS+L NR++G A+V D P
Sbjct: 248 DEGDEDLISGRGFTEGARKAGPKPVGVL---AIVGRPNVGKSSLVNRILGRRAAVVEDTP 304
Query: 196 GVTRDRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAV 255
GVTRDR+ + W +F LVDTGG EA V
Sbjct: 305 GVTRDRVSYDAEWAGTDFKLVDTGGW------------------------------EADV 334
Query: 256 ARMPSMIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCES 315
+ S I QA A+ + ++F+VDGQ G+T DE I LR K I+LAVNK +
Sbjct: 335 EGIESAIASQAQVAVTLADAVVFVVDGQVGMTTTDERIVKMLRA--AGKPIVLAVNKIDD 392
Query: 316 PRKGIMQVSEFWSLGFS-PLPISAISGTGTGELLDLVCSELKKVEVCIGFL 365
+ +EFW LG P ISA+ G G G+LLD+ +LK+ E G+L
Sbjct: 393 QASEYL-AAEFWKLGLGEPYSISAMHGRGVGDLLDVALDKLKQAEKTSGYL 442
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 44/75 (58%)
Query: 147 KQKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRS 206
K K+ + T G + L RVA+VGRPNVGKS+L N+L RA+V D G TRD +
Sbjct: 431 KLKQAEKTSGYLTPSGLRRVALVGRPNVGKSSLLNQLAREERAVVNDLAGTTRDPVDEIV 490
Query: 207 FWGEHEFMLVDTGGV 221
+++ +DT G+
Sbjct: 491 NIDGEDWLFIDTAGI 505
>gi|357238269|ref|ZP_09125606.1| ribosome-associated GTPase EngA [Streptococcus ictaluri 707-05]
gi|356752992|gb|EHI70113.1| ribosome-associated GTPase EngA [Streptococcus ictaluri 707-05]
Length = 436
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/195 (39%), Positives = 107/195 (54%), Gaps = 34/195 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 2 VLPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTTGEWLNRKFSLIDTGGI 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+V A I+ QA A+EE+ VI+F+V
Sbjct: 62 DDVD------------------------------APFMEQIKHQAQIAMEEADVIVFVVS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE ++ L + +K +ILAVNK ++P + +F+SLG P P S++
Sbjct: 92 GKEGVTDADEYVSKILYRT--NKPVILAVNKVDNPEMR-NDIYDFYSLGLGDPYPASSVH 148
Query: 341 GTGTGELLDLVCSEL 355
G GTG++LD + L
Sbjct: 149 GIGTGDILDTIVENL 163
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 91/197 (46%), Gaps = 39/197 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
R +++GRPNVGKS+L N ++G +R I G TRD + E E+ ++DT G+
Sbjct: 176 RFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTNFTDAEGQEYTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVINAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPLP 335
G+ D+ IA + + K +I+ VNK ++ K V+ +F L ++P+
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGMIIVVNKWDTLEKDNHTVAKWEADIRDQFQFLAYAPII 326
Query: 336 -ISAISGTGTGELLDLV 351
+SA++ +L +L+
Sbjct: 327 FVSAVTKQRLNKLPELI 343
>gi|291087651|ref|ZP_06347028.2| ribosome-associated GTPase EngA [Clostridium sp. M62/1]
gi|291074566|gb|EFE11930.1| ribosome biogenesis GTPase Der [Clostridium sp. M62/1]
Length = 446
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/193 (43%), Positives = 109/193 (56%), Gaps = 32/193 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VG PNVGKS LFN L G +IV D PGVTRDR+Y W + F L+DTGG+
Sbjct: 8 PVVAVVGCPNVGKSTLFNVLAGEMISIVKDTPGVTRDRIYADCTWLDKAFTLIDTGGI-- 65
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P+ +R+ +A+M QA AI + VIIF+VD +
Sbjct: 66 ----EPD-------------------SRDIILAQM----REQAEIAIATADVIIFIVDVR 98
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT +D ++AD LRK+ K +ILAVNK +S K V EF++LG P+PISA S
Sbjct: 99 QGLTDSDSKVADMLRKS--RKPVILAVNKVDSFAKFGNDVYEFYNLGIGDPIPISAASRL 156
Query: 343 GTGELLDLVCSEL 355
G GELLD V +
Sbjct: 157 GLGELLDAVVAHF 169
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 38/197 (19%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
PR+AIVG+PNVGKS++ N+L+G NR IV + G TRD + E++ +DT G+
Sbjct: 182 PRIAIVGKPNVGKSSIVNKLLGENRVIVSNIAGTTRDAVDTEIVHNGTEYVFIDTAGL-- 239
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ + I E+L + I + A+E + V++ ++D
Sbjct: 240 --RRKNKIKEELERYSII-----------------------RTVTAVERADVVLVVIDAT 274
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----LGFSPLP--- 335
G+T D +IA K II+ VNK ++ K + E+ + L F P
Sbjct: 275 EGVTEQDAKIAGIAHDR--GKGIIIVVNKWDAIEKNDKTIYEYTNKIKTILSFVPYAEYV 332
Query: 336 -ISAISGTGTGELLDLV 351
+SA +G +L DL+
Sbjct: 333 FVSAQTGQRLNKLYDLI 349
>gi|239616622|ref|YP_002939944.1| GTP-binding protein EngA [Kosmotoga olearia TBF 19.5.1]
gi|259645881|sp|C5CIV1.1|DER_KOSOT RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|239505453|gb|ACR78940.1| small GTP-binding protein [Kosmotoga olearia TBF 19.5.1]
Length = 442
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 111/194 (57%), Gaps = 33/194 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
V IVGRPNVGKS LFNRLVGG RAI+ D+PGVTRD ++GR FW F +VDT G+ +
Sbjct: 4 VLIVGRPNVGKSTLFNRLVGGRRAIIDDQPGVTRDFVFGRVFWQHKSFEVVDTCGLFD-- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
S +I+E+ T+ A + E +++F+VDG+ G
Sbjct: 62 -SPKDIIEEKMKEVTL--------------------------ALLSEGDLLLFVVDGRKG 94
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV-SEFWSLGFS-PLPISAISGTG 343
LT+AD +IA+ LRK+ K +IL NK E+ K ++V E +SLGF P+PISA G
Sbjct: 95 LTSADMDIAETLRKS--KKRVILVANKVENVDKFTLEVLPELYSLGFGEPIPISAEHGLN 152
Query: 344 TGELLDLVCSELKK 357
LL+ + L++
Sbjct: 153 IDVLLEKIIKTLEE 166
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 103/216 (47%), Gaps = 35/216 (16%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VAI+G+PN GKS+LFN +VG +R++V + PG TRD + +DT G+
Sbjct: 183 KVAIIGKPNAGKSSLFNSIVGSDRSLVTEIPGTTRDMVDETIEIDGMPVTFIDTAGMRRK 242
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK +G++ + +V R A AIE S + I ++D
Sbjct: 243 SK--------------VGVKNVEY----YSVMR--------AVDAIERSDICILVIDATL 276
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKC----ESPRKGIMQV--SEFWSLGFSPLPI-S 337
G++ D+ IA + K K II NK E ++ ++ E + + +SP+ S
Sbjct: 277 GISNQDQRIAGLVEKR--GKGIITVFNKSDLLNEKHKESLLSSFERELYFIDYSPVVFTS 334
Query: 338 AISGTGTGELLDLVCSELKKVEVCIGFLLICNAITK 373
A G G ELLD + +K+++ I L+ N I++
Sbjct: 335 ATEGFGIDELLDKLFLVAEKIDLRIPTGLLNNLISR 370
>gi|139474375|ref|YP_001129091.1| GTP-binding protein EngA [Streptococcus pyogenes str. Manfredo]
gi|166225865|sp|A2RGB0.1|DER_STRPG RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|134272622|emb|CAM30889.1| GTP-binding protein EngA [Streptococcus pyogenes str. Manfredo]
Length = 436
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/195 (38%), Positives = 107/195 (54%), Gaps = 34/195 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 2 VLPTVAIVGRPNVGKSTLFNRIAGERISIVEDIEGVTRDRIYATGEWLNRQFSLIDTGGI 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+V A I+ QA A+EE+ VI+F+V
Sbjct: 62 DDVD------------------------------APFMEQIKHQAQIAMEEADVIVFVVS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE ++ L + + +ILAVNK ++P + +F+SLG P P+S++
Sbjct: 92 GKEGVTDADEYVSKILYRT--NTPVILAVNKVDNPEMR-NDIYDFYSLGLGDPYPVSSVH 148
Query: 341 GTGTGELLDLVCSEL 355
G GTG++LD + L
Sbjct: 149 GIGTGDVLDAIVENL 163
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 91/197 (46%), Gaps = 39/197 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
R +++GRPNVGKS+L N ++G +R I G TRD + + EF ++DT G+
Sbjct: 176 RFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTHFTDADGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKIYEN-------------------TEKYSVMR--------AMRAIDRSGVVLMVINAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPLP 335
G+ D+ IA + + K +I+ VNK ++ K V+ +F L ++P+
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGMIIVVNKWDTIDKDNHTVAKWEADIRDQFQFLTYAPII 326
Query: 336 -ISAISGTGTGELLDLV 351
+SA++ +L DL+
Sbjct: 327 FVSALTKQRLNKLPDLI 343
>gi|158320432|ref|YP_001512939.1| GTP-binding protein EngA [Alkaliphilus oremlandii OhILAs]
gi|166920096|sp|A8MH56.1|DER_ALKOO RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|158140631|gb|ABW18943.1| small GTP-binding protein [Alkaliphilus oremlandii OhILAs]
Length = 440
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 108/193 (55%), Gaps = 33/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN++ G +IV ++PGVTRDR+Y + W ++F L+DTGG+
Sbjct: 4 PIVAVVGRPNVGKSTLFNKIAGERISIVENKPGVTRDRIYAEAEWLNYQFTLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P E + P+ + RQA A+E + VIIF+VDG+
Sbjct: 62 ----EPESEEII-----------------------PAQMRRQAELAMETANVIIFVVDGR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT+ D ++A+ LRK K +I+ +NK ++ R EF+ LG P+ ISA G
Sbjct: 95 EGLTSVDRDVAELLRKT--KKPVIVTLNKVDT-RHQSEHFYEFYELGMGDPIEISASLGL 151
Query: 343 GTGELLDLVCSEL 355
G G+LLD V
Sbjct: 152 GIGDLLDEVVKNF 164
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 100/200 (50%), Gaps = 36/200 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VA++G+PNVGKS+L NR++G R IV D G TRD + G+ ++L+DT G+
Sbjct: 178 KVAMIGKPNVGKSSLINRILGEERVIVSDIAGTTRDAIDTPFTDGDDRYVLIDTAGIRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
S+ IT +I + ++ R A AA+E+S V + ++D
Sbjct: 238 SR----------ITESI---------EKYSIVR--------AIAAVEKSDVCLLVIDASE 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS------LGFSPLPISA 338
G+T D++IA + +N K +++ VNK + K ++EF S PI
Sbjct: 271 GVTEQDKKIAGYSHEN--GKGMVIVVNKWDIIEKDNHTMNEFIKEIRNELTYISYAPIVF 328
Query: 339 ISGTGTGELLDLVCSELKKV 358
+S TG+ ++ + E+K V
Sbjct: 329 VSAL-TGQRMNKILEEVKHV 347
>gi|222152562|ref|YP_002561737.1| GTP-binding protein EngA [Streptococcus uberis 0140J]
gi|254783170|sp|B9DTQ3.1|DER_STRU0 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|222113373|emb|CAR41004.1| GTP-binding protein EngA [Streptococcus uberis 0140J]
Length = 436
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/195 (38%), Positives = 108/195 (55%), Gaps = 34/195 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 2 VLPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRKFSLIDTGGI 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+V A I+ QA A++E+ VI+F+V
Sbjct: 62 DDVD------------------------------APFMEQIKHQAQIAMDEADVIVFVVS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE +A L + +K +ILAVNK ++P + +F++LG P P S++
Sbjct: 92 GKEGVTDADEYVAKMLYRT--NKPVILAVNKVDNPEMR-NDIYDFYALGLGDPYPASSVH 148
Query: 341 GTGTGELLDLVCSEL 355
G GTG++LD + +L
Sbjct: 149 GIGTGDILDAIIEKL 163
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 90/198 (45%), Gaps = 41/198 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
R +++GRPNVGKS+L N ++G R I G TRD + F + E+ ++DT G+
Sbjct: 176 RFSLIGRPNVGKSSLINAILGEERVIASPVAGTTRDAI-DTHFTDQDGQEYNMIDTAGMR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A AI+ S V++ +++
Sbjct: 235 KSGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLLVINA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPL 334
+ G+ D+ IA + + K +I+ VNK + K V+ +F L ++P+
Sbjct: 268 EEGIREYDKRIAGFAHE--AGKGMIIVVNKWDLLEKDNHTVAKWEADIRDQFQFLSYAPI 325
Query: 335 P-ISAISGTGTGELLDLV 351
+SA++ +L +L+
Sbjct: 326 IFVSALTKQRLNKLPELI 343
>gi|304436527|ref|ZP_07396500.1| ribosome-associated GTPase EngA [Selenomonas sp. oral taxon 149
str. 67H29BP]
gi|304370470|gb|EFM24122.1| ribosome-associated GTPase EngA [Selenomonas sp. oral taxon 149
str. 67H29BP]
Length = 442
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/191 (42%), Positives = 109/191 (57%), Gaps = 33/191 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN++ +IV D PGVTRDR+Y + W HEF ++DTGG
Sbjct: 4 PIVAVVGRPNVGKSTLFNQIGKKRVSIVDDMPGVTRDRIYLDAEWLNHEFTIIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I + + M S QA A+EE+ VI+FLVDG+
Sbjct: 61 ----------------------IEFDESDHILRSMRS----QAELAMEEADVILFLVDGR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
AGLT +DEE+A LR+ K +ILAVNK +S + + + +F+SLG P+PISA +
Sbjct: 95 AGLTTSDEEVARLLRRT--KKPVILAVNKIDSFEREAL-IYDFYSLGLGDPIPISASNAM 151
Query: 343 GTGELLDLVCS 353
G+LLD V +
Sbjct: 152 NLGDLLDAVVA 162
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 73/149 (48%), Gaps = 29/149 (19%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+A+VGRPNVGKS+L NRL+G R IV D PG TRD + +++L+DT G+
Sbjct: 179 IAVVGRPNVGKSSLVNRLLGEERVIVSDVPGTTRDAIDTHFTKDGAKYLLIDTAGMRRKG 238
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
K I L +V R + AI+ + V++ +++ G
Sbjct: 239 K-------------------ITLPVERYSVMR--------SLRAIDRAGVVLMVINAAEG 271
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCE 314
+ D +IA ++ ++ K +I+ VNK +
Sbjct: 272 ILEQDTKIAGYVHES--GKGVIIVVNKWD 298
>gi|71902945|ref|YP_279748.1| GTP-binding protein EngA [Streptococcus pyogenes MGAS6180]
gi|123640474|sp|Q48V63.1|DER_STRPM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|71802040|gb|AAX71393.1| GTP-binding protein [Streptococcus pyogenes MGAS6180]
Length = 436
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/195 (38%), Positives = 107/195 (54%), Gaps = 34/195 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 2 VLPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRQFSLIDTGGI 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+V A I+ QA A+EE+ VI+F+V
Sbjct: 62 DDVD------------------------------APFMEQIKHQAQIAMEEADVIVFVVS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE ++ L + + +ILAVNK ++P + +F+SLG P P+S++
Sbjct: 92 GKEGVTDADEYVSKILYRT--NTPVILAVNKVDNPEMR-NDIYDFYSLGLGDPYPVSSVH 148
Query: 341 GTGTGELLDLVCSEL 355
G GTG++LD + L
Sbjct: 149 GIGTGDVLDEIVENL 163
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 91/197 (46%), Gaps = 39/197 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
R +++GRPNVGKS+L N ++G +R I G TRD + + EF ++DT G+
Sbjct: 176 RFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTHFTDADGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKIYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVINAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPLP 335
G+ D+ IA + + K +I+ VNK ++ K V+ +F L ++P+
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGMIIVVNKWDTIDKDNHTVAKWEADIRDQFQFLTYAPII 326
Query: 336 -ISAISGTGTGELLDLV 351
+SA++ +L DL+
Sbjct: 327 FVSALTKQRLNKLPDLI 343
>gi|357057998|ref|ZP_09118855.1| GTP-binding protein engA [Selenomonas infelix ATCC 43532]
gi|355374575|gb|EHG21869.1| GTP-binding protein engA [Selenomonas infelix ATCC 43532]
Length = 441
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/195 (41%), Positives = 110/195 (56%), Gaps = 33/195 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN++ +IV D PGVTRDR+Y + W HEF ++DTGG
Sbjct: 4 PIVAVVGRPNVGKSTLFNQIGKKRVSIVDDMPGVTRDRIYMDAEWLNHEFTIIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I + + M S QA A+EE+ VI+FLVDG+
Sbjct: 61 ----------------------IEFDESDHILRSMRS----QAELAMEEADVILFLVDGR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
AGLT++DEE+ LR+ K +ILAVNK +S + + + +F+SLG P+PISA +
Sbjct: 95 AGLTSSDEEVGRLLRRT--QKPVILAVNKIDSFEREAL-IYDFYSLGLGDPIPISASNAM 151
Query: 343 GTGELLDLVCSELKK 357
G+LLD V + K
Sbjct: 152 NLGDLLDAVVAAFPK 166
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 73/149 (48%), Gaps = 29/149 (19%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+A+VGRPNVGKS+L NRL+G R IV D PG TRD + +++L+DT G+
Sbjct: 179 IAVVGRPNVGKSSLVNRLLGEERVIVSDVPGTTRDAIDTHFTRDGAKYLLIDTAGMRRKG 238
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
K I L +V R + AI+ + V++ +++ G
Sbjct: 239 K-------------------ISLPVERYSVMR--------SLRAIDRAGVVLMVINAAEG 271
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCE 314
+ D +IA ++ ++ K +I+ VNK +
Sbjct: 272 ILEQDTKIAGYVHES--GKGVIIVVNKWD 298
>gi|357043885|ref|ZP_09105571.1| GTP-binding protein engA [Prevotella histicola F0411]
gi|355367939|gb|EHG15365.1| GTP-binding protein engA [Prevotella histicola F0411]
Length = 437
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/192 (42%), Positives = 106/192 (55%), Gaps = 33/192 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRL AIV D G TRDR YG+ W EF +VDTGG V
Sbjct: 5 VAIVGRPNVGKSTLFNRLTQTRHAIVSDTAGTTRDRQYGKCQWNGREFSVVDTGGW--VV 62
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
KS +I ED I +Q A EE+ +++FLVD + G
Sbjct: 63 KSD-DIFED--------------------------AIRKQVLVATEEADLVLFLVDAETG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+T DE++A LR+ + +IL NK ++ + Q +EF+ LG P+ ISA +G GT
Sbjct: 96 VTDWDEDVAMILRRTKLP--VILVANKVDNSGE-YYQAAEFYKLGLGDPICISAATGGGT 152
Query: 345 GELLDLVCSELK 356
G+LLDLV +LK
Sbjct: 153 GDLLDLVLEKLK 164
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 75/152 (49%), Gaps = 29/152 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
+PR A+VGRPN GKS++ N +G +R IV + G TRD +Y R +F LVDT G+
Sbjct: 175 IPRFAVVGRPNAGKSSIINAFIGEDRNIVTEIAGTTRDSIYTRYTKFGFDFYLVDTAGI- 233
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + + EDL + + ++ +IE S V I ++D
Sbjct: 234 ---RRKNKVTEDLEFYSVM-----------------------RSIRSIENSDVCILMLDA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
G+ A D I +++N +K +++ VNK +
Sbjct: 268 TRGIEAQDMNIFQLIQRN--NKSLVVVVNKWD 297
>gi|15606936|ref|NP_214317.1| GTP-binding protein EngA [Aquifex aeolicus VF5]
gi|8134426|sp|O67749.1|DER_AQUAE RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|2984183|gb|AAC07715.1| GTP binding protein Era [Aquifex aeolicus VF5]
Length = 433
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 113/192 (58%), Gaps = 33/192 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
RV I+GRPNVGKS LFNR++G AIV D PGVTRD++ ++ W EF++VDTGG+
Sbjct: 4 RVVIIGRPNVGKSTLFNRIIGKRYAIVEDYPGVTRDKIEAKAEWAGKEFIIVDTGGL--- 60
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+P T++ + + ++E++ I ++ VI+F+VDG+
Sbjct: 61 ---------------------VP-ETKDELIREVKKVVEQE----IPKADVILFVVDGKE 94
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGTG 343
GL D+EIA +L Y DK ++L VNK ++ R+ V+EF++LGF + PISA G G
Sbjct: 95 GLNPLDQEIAKYLYP-YADK-VLLVVNKIDNLRQE-KNVAEFYTLGFEKIFPISAQHGKG 151
Query: 344 TGELLDLVCSEL 355
GELLD V L
Sbjct: 152 VGELLDEVVKYL 163
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 89/194 (45%), Gaps = 37/194 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VA +GRPNVGKS+L N ++ R IV G TRD + W + F+L+DT GV
Sbjct: 176 KVAFIGRPNVGKSSLVNAILKDERVIVSPIAGTTRDAIEIPFRWKDKNFILIDTAGV--- 232
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+P+ +E G+E + ++ AI+ + V ++D
Sbjct: 233 --RRPSNVE-------YGIEFYSVG---------------RSLKAIDLADVCCLVIDASE 268
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK------CESPRKGIMQVSEFWSLGFSPLPIS- 337
G T D+ + + + Y K ++ NK E +GI++ E + L F+P+ +
Sbjct: 269 GPTRQDKRLGGLIERRY--KGCVIVANKMDISPWSEEELEGIIR-KELFFLDFAPIVFTV 325
Query: 338 AISGTGTGELLDLV 351
A G G ELL+ +
Sbjct: 326 ATKGKGVEELLNWI 339
>gi|402303539|ref|ZP_10822632.1| ribosome-associated GTPase EngA [Selenomonas sp. FOBRC9]
gi|400378377|gb|EJP31234.1| ribosome-associated GTPase EngA [Selenomonas sp. FOBRC9]
Length = 441
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/195 (41%), Positives = 111/195 (56%), Gaps = 33/195 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN++ +IV D PGVTRDR+Y + W HEF ++DTGG
Sbjct: 4 PIVAVVGRPNVGKSTLFNQIGKKRVSIVDDMPGVTRDRIYMDAEWLNHEFTIIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I + + M S QA A+EE+ VI+FLVDG+
Sbjct: 61 ----------------------IEFDESDHILRSMRS----QAELAMEEADVILFLVDGR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
AGLTA+DEE+ LR+ +K +ILAVNK +S + + + +F++LG P+PISA +
Sbjct: 95 AGLTASDEEVGRLLRRT--NKPVILAVNKIDSFERESL-IYDFYALGLGDPIPISASNAM 151
Query: 343 GTGELLDLVCSELKK 357
G+LLD V + K
Sbjct: 152 NLGDLLDAVVAAFPK 166
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 92/196 (46%), Gaps = 39/196 (19%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+A+VGRPNVGKS+L NRL+G R IV D PG TRD + +++L+DT G+
Sbjct: 179 IAVVGRPNVGKSSLVNRLLGEERVIVSDVPGTTRDAIDTHFTRDGAKYLLIDTAGMRRKG 238
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
K I L +V R + AI+ + V++ +++ G
Sbjct: 239 K-------------------ITLPVERYSVMR--------SLRAIDRAGVVLMVINAAEG 271
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKC----ESPRKGIMQVS-----EFWSLGFSP-LP 335
+ D +IA ++ ++ K +I+ VNK E K ++ + E L ++P L
Sbjct: 272 ILEQDTKIAGYVHES--GKGVIIVVNKWDIFPEKNDKSTLRFTDDLREELGFLQYAPVLY 329
Query: 336 ISAISGTGTGELLDLV 351
SA++G + +LV
Sbjct: 330 TSALTGQRVERVTELV 345
>gi|375088358|ref|ZP_09734698.1| GTPase Der [Dolosigranulum pigrum ATCC 51524]
gi|374562396|gb|EHR33726.1| GTPase Der [Dolosigranulum pigrum ATCC 51524]
Length = 437
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/195 (44%), Positives = 108/195 (55%), Gaps = 38/195 (19%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV DEPGVTRDR+Y + W EF L+DTGG
Sbjct: 4 PLVAIVGRPNVGKSTIFNRIVGERISIVRDEPGVTRDRIYADAEWLGKEFSLIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I M+ PL I+ QA AIEE+ VII + Q
Sbjct: 61 -----------------ITMDEEPLHKE----------IKLQAEIAIEEADVIIMMTSVQ 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAIS 340
G+T D+++A L K+ K IILAVNK ++P R I Q F++LG P PIS
Sbjct: 94 DGITDMDDQVAPILYKS--GKPIILAVNKADNPELRTDIYQ---FYALGLGDPYPISGSH 148
Query: 341 GTGTGELLDLVCSEL 355
GTG G+LLD V ++
Sbjct: 149 GTGLGDLLDEVIAQF 163
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 80/164 (48%), Gaps = 32/164 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
+ +++GRPNVGKS+L N+++G NR IV D G TRD + F + EF+++DT G+
Sbjct: 177 KFSLIGRPNVGKSSLVNKILGENRVIVSDIEGTTRDAI-DTPFITQDDREFVMIDTAGIR 235
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K + T + +V R A AIE S V++ ++D
Sbjct: 236 RRGK-------------------VYEKTEKYSVMR--------AMRAIERSDVVLCVIDA 268
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
+ G+ D+++ + + K II+ VNK ++ K + +F
Sbjct: 269 EVGIREQDKKVFGYAHE--AGKGIIIVVNKWDTVEKDNHTMRDF 310
>gi|417092258|ref|ZP_11956992.1| GTP-binding protein EngA [Streptococcus suis R61]
gi|353532827|gb|EHC02496.1| GTP-binding protein EngA [Streptococcus suis R61]
Length = 436
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/199 (38%), Positives = 108/199 (54%), Gaps = 34/199 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRKFSLIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE ++ L K +K +IL VNK ++P + +F+SLG P P+S++ G
Sbjct: 93 KEGVTDADEYVSRILYKT--NKPVILVVNKVDNPEMR-NDIYDFYSLGLGDPYPVSSVHG 149
Query: 342 TGTGELLDLVCSELKKVEV 360
GTG++LD + L EV
Sbjct: 150 IGTGDVLDAIIENLPAQEV 168
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 71/155 (45%), Gaps = 30/155 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G R I G TRD + E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEERVIASPVAGTTRDAIDTHFTDPEGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AIE S VI+ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIERSDVILMVINAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+ D+ IA + + K +I+ VNK ++ K
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGMIIVVNKWDTLEK 301
>gi|384196948|ref|YP_005582692.1| ribosome-associated GTPase EngA [Bifidobacterium breve
ACS-071-V-Sch8b]
gi|333109842|gb|AEF26858.1| ribosome-associated GTPase EngA [Bifidobacterium breve
ACS-071-V-Sch8b]
gi|339479236|gb|ABE95704.1| GTP-binding protein [Bifidobacterium breve UCC2003]
Length = 708
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/231 (37%), Positives = 117/231 (50%), Gaps = 37/231 (16%)
Query: 136 DETDDRKDSGKKQKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEP 195
DE D+ SG+ + G P +L AIVGRPNVGKS+L NR++G A+V D P
Sbjct: 248 DEGDEDLISGRGFEDGARKSGPKPVGVL---AIVGRPNVGKSSLVNRILGRRAAVVEDTP 304
Query: 196 GVTRDRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAV 255
GVTRDR+ + W +F LVDTGG EA V
Sbjct: 305 GVTRDRVSYDAEWAGTDFKLVDTGGW------------------------------EADV 334
Query: 256 ARMPSMIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCES 315
+ S I QA A+ + ++F+VDGQ G+T DE I LR + K ++LAVNK +
Sbjct: 335 EGIESAIASQAQVAVTLADAVVFVVDGQVGMTTTDERIVKMLRAS--GKPVVLAVNKIDD 392
Query: 316 PRKGIMQVSEFWSLGFS-PLPISAISGTGTGELLDLVCSELKKVEVCIGFL 365
+ +EFW LG P ISA+ G G G+LLD+ +LK+ E G+L
Sbjct: 393 NASEYL-AAEFWKLGLGEPYSISAMHGRGVGDLLDVALGKLKEAEKASGYL 442
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%)
Query: 147 KQKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRS 206
K K+ + G + L RVA+VGRPNVGKS+L N+L RA+V D G TRD +
Sbjct: 431 KLKEAEKASGYLTPSGLRRVALVGRPNVGKSSLLNQLAHSERAVVNDLAGTTRDPVDEIV 490
Query: 207 FWGEHEFMLVDTGGV 221
+++ +DT G+
Sbjct: 491 DIDGEDWLFIDTAGI 505
>gi|323453254|gb|EGB09126.1| hypothetical protein AURANDRAFT_37344 [Aureococcus anophagefferens]
Length = 540
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/206 (40%), Positives = 111/206 (53%), Gaps = 33/206 (16%)
Query: 155 IGNVPEHLLPRVAIVGRPNVGKSALFNRL--VGGNRAIVVDEPGVTRDRMYGRSFWGEHE 212
+ VP P VAI+GRPNVGKS+L NRL G I V+E GVTRDR+Y ++ W
Sbjct: 60 LKRVPRGARPTVAIIGRPNVGKSSLVNRLCDAGKKGTIAVNEAGVTRDRVYQKAEWCGRT 119
Query: 213 FMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEE 272
F +VDTGG+L ED EG A I QAT A+ E
Sbjct: 120 FDVVDTGGLL---------FED--------EEG----------ALFLDEIREQATLALRE 152
Query: 273 SCVIIFLVDGQAGLTAADEEIADWLRKNYMDKF--IILAVNKCESPRKGIMQVSEFWSLG 330
+C + +VDG+AG T D++IA +LR+ + D+ ++LAVNKCES + V++FW LG
Sbjct: 153 ACACVVVVDGRAGSTRLDDDIARFLRR-WPDQTLEVVLAVNKCESAEREAELVADFWPLG 211
Query: 331 FS-PLPISAISGTGTGELLDLVCSEL 355
P SAI G G E+LD + L
Sbjct: 212 LGEPRACSAIHGNGVAEVLDALLPAL 237
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 166 VAIVGRPNVGKSALFNRLV--GGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
V +GRPNVGKS+L NR + G RAIV D G TRD + F VDT GV
Sbjct: 262 VCFLGRPNVGKSSLLNRFLGPGETRAIVSDVAGTTRDAVDAELDVDGTIFRFVDTAGV 319
>gi|227543422|ref|ZP_03973471.1| GTP-binding protein EngA [Lactobacillus reuteri CF48-3A]
gi|338204371|ref|YP_004650516.1| ribosome-associated GTPase EngA [Lactobacillus reuteri SD2112]
gi|227186601|gb|EEI66672.1| GTP-binding protein EngA [Lactobacillus reuteri CF48-3A]
gi|336449611|gb|AEI58226.1| ribosome-associated GTPase EngA [Lactobacillus reuteri SD2112]
Length = 440
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 109/193 (56%), Gaps = 34/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFNR+ G +IV D PGVTRDR+Y + W F ++DTGG
Sbjct: 7 PIVAVVGRPNVGKSTLFNRIAGERISIVEDTPGVTRDRIYAHAEWLGKHFSMIDTGG--- 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I + PL T+ I +QA AI+E+ VIIF+ D +
Sbjct: 64 -----------------IEISDQPLLTQ----------IRQQAEVAIDEADVIIFVADVE 96
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE++A L ++ +K ++LAVNK ++P + + +++SLG P +S++ G
Sbjct: 97 NGVTDADEQVARILYRS--NKPVVLAVNKVDNPERR-SDIYDYYSLGLGEPYAVSSVHGI 153
Query: 343 GTGELLDLVCSEL 355
G G+LLD V E
Sbjct: 154 GMGDLLDAVIKEF 166
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 81/178 (45%), Gaps = 39/178 (21%)
Query: 167 AIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLNVS 225
+ +GRPNVGKS+L N ++G NR IV + G TRD + + + +F +VDT G+
Sbjct: 181 SFIGRPNVGKSSLVNAILGENRVIVSNVAGTTRDAINTQFETADGQKFTMVDTAGIRKKG 240
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
K N T ++ R + AI++S V++ +++ + G
Sbjct: 241 KIYEN-------------------TERYSLMR--------SMRAIDDSDVVLVVLNAEEG 273
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV---------SEFWSLGFSPL 334
+ D+ IA + + +I+ VNK ++ ++ + EF L ++P+
Sbjct: 274 IRELDKHIAGYAHEAGCG--VIIVVNKWDTLKEKDHRTMTDFTNLIRQEFQYLSYAPI 329
>gi|417942185|ref|ZP_12585462.1| Ribosome-associated GTPase EngA [Bifidobacterium breve CECT 7263]
gi|376167570|gb|EHS86406.1| Ribosome-associated GTPase EngA [Bifidobacterium breve CECT 7263]
Length = 708
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/231 (37%), Positives = 117/231 (50%), Gaps = 37/231 (16%)
Query: 136 DETDDRKDSGKKQKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEP 195
DE D+ SG+ + G P +L AIVGRPNVGKS+L NR++G A+V D P
Sbjct: 248 DEGDEDLISGRGFEDGARKSGPKPVGVL---AIVGRPNVGKSSLVNRILGRRAAVVEDTP 304
Query: 196 GVTRDRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAV 255
GVTRDR+ + W +F LVDTGG EA V
Sbjct: 305 GVTRDRVSYDAEWAGTDFKLVDTGGW------------------------------EADV 334
Query: 256 ARMPSMIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCES 315
+ S I QA A+ + ++F+VDGQ G+T DE I LR + K ++LAVNK +
Sbjct: 335 EGIESAIASQAQVAVTLADAVVFVVDGQVGMTTTDERIVKMLRAS--GKPVVLAVNKIDD 392
Query: 316 PRKGIMQVSEFWSLGFS-PLPISAISGTGTGELLDLVCSELKKVEVCIGFL 365
+ +EFW LG P ISA+ G G G+LLD+ +LK+ E G+L
Sbjct: 393 NASEYL-AAEFWKLGLGEPYSISAMHGRGVGDLLDVALGKLKEAEKASGYL 442
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%)
Query: 147 KQKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRS 206
K K+ + G + L RVA+VGRPNVGKS+L N+L RA+V D G TRD +
Sbjct: 431 KLKEAEKASGYLTPSGLRRVALVGRPNVGKSSLLNQLARSERAVVNDLAGTTRDPVDEIV 490
Query: 207 FWGEHEFMLVDTGGV 221
+++ +DT G+
Sbjct: 491 DIDGEDWLFIDTAGI 505
>gi|260893088|ref|YP_003239185.1| ribosome-associated GTPase EngA [Ammonifex degensii KC4]
gi|260865229|gb|ACX52335.1| ribosome-associated GTPase EngA [Ammonifex degensii KC4]
Length = 447
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/194 (42%), Positives = 107/194 (55%), Gaps = 34/194 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P V IVGRPNVGKS LFNRLVG AIV +EPGVTRDR+Y W EF+LVDTGGV+
Sbjct: 4 PVVVIVGRPNVGKSTLFNRLVGKGVAIVEEEPGVTRDRLYREVEWCGREFVLVDTGGVVE 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+S PL I RQ A+EE+ +++F+VD +
Sbjct: 64 SPES-------------------PLEV----------AIRRQVEQALEEADLVLFVVDYK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS--PLPISAISG 341
G+TA D+ IA LR+ K +L VNK + + +S+F++LG S P+P+SA G
Sbjct: 95 TGVTAEDQAIASMLRRT--GKPTLLVVNKVDKFDPPPV-LSDFYALGLSTEPIPVSAAQG 151
Query: 342 TGTGELLDLVCSEL 355
G+LLD V L
Sbjct: 152 LNVGDLLDAVIDRL 165
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 93/192 (48%), Gaps = 38/192 (19%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS+L N L+G R IV D PG TRD + W ++L+DT G+ S
Sbjct: 182 VAIVGRPNVGKSSLVNALLGEERVIVSDIPGTTRDAVDTFFTWEGQPYILIDTAGLRRRS 241
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+ I E+ A R++ + +A A+ + V + ++DG G
Sbjct: 242 R----IKEE--------------AERQSCL---------RARQALRRAHVAVLVLDGAEG 274
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKC--------ESPRKGIMQVSEFWSLGFSPLPIS 337
+T D+ IA + + + +++AVNK ++PR E + + ++P+ +
Sbjct: 275 VTMQDKRIAGLIEE--AGRAVVIAVNKWDLVPSSRKDAPRYLEALRRELYFINYAPVVFT 332
Query: 338 -AISGTGTGELL 348
A G G ++L
Sbjct: 333 VAPEGFGVTQVL 344
>gi|375084641|ref|ZP_09731501.1| ribosome-associated GTPase EngA [Megamonas funiformis YIT 11815]
gi|374567888|gb|EHR39086.1| ribosome-associated GTPase EngA [Megamonas funiformis YIT 11815]
Length = 444
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/195 (38%), Positives = 109/195 (55%), Gaps = 31/195 (15%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS FN++ +IV D PGVTRDR+Y + W H+F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTFFNQIGKKRVSIVEDFPGVTRDRIYMDAEWLNHQFTMIDTGGIEL 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ + I+ + + +QA AIEE+ VI+F+VDG+
Sbjct: 64 ENDGEGKIL---------------------------ASMRQQARLAIEEADVIVFMVDGR 96
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T DEEI LR K +I+AVNK +SP++ + V EF++LG P+ ISA +
Sbjct: 97 TGMTHDDEEIGHILRNTR--KPVIVAVNKIDSPKQH-LDVYEFYNLGLGEPIGISAANAL 153
Query: 343 GTGELLDLVCSELKK 357
G+LLD + + K
Sbjct: 154 NVGDLLDEIVANFPK 168
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 103/226 (45%), Gaps = 42/226 (18%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
EH R+A++GRPNVGKS+L N L+G R IV D G TRD + + G F L+DT
Sbjct: 175 EHDEIRIAVIGRPNVGKSSLVNALLGQERVIVSDVAGTTRDAIDTKFDDGNTHFTLIDTA 234
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G+ K I + +V R + A++ + V++ +
Sbjct: 235 GMRRKGK-------------------IDMPIERYSVMR--------SLRAVDRADVVLMV 267
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVS-----EFWSLGF 331
+ G+T D++IA + ++ K I+ VNK E K ++ + E L +
Sbjct: 268 ISAPEGVTEQDKKIAGYAHES--GKGCIIVVNKWDLIEKDDKTSLRFTEDIRDELGFLQY 325
Query: 332 SP-LPISAISGTGTGELLDLVC----SELKKVEVCIGFLLICNAIT 372
+P L SA++ ++DLV + +V+ + L+ +A++
Sbjct: 326 APVLYTSALTKQRVHRVVDLVKYVAEQQAMRVQTSVLNQLVMDAVS 371
>gi|284040067|ref|YP_003389997.1| ribosome-associated GTPase EngA [Spirosoma linguale DSM 74]
gi|283819360|gb|ADB41198.1| ribosome-associated GTPase EngA [Spirosoma linguale DSM 74]
Length = 435
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 105/192 (54%), Gaps = 33/192 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRL +AI+ ++ GVTRDR YG + W + F ++DTGG +
Sbjct: 5 VAIVGRPNVGKSTLFNRLTEQRQAIMDNQSGVTRDRHYGTAEWNDKYFTVIDTGGYV--- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+G E + I Q AI+ES +++F+VD Q G
Sbjct: 62 ---------------VGSEDV-----------FEESIREQVEMAIQESTLLLFVVDTQTG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+T DE+ AD LR++ K + + NK E+ + +EF++LG P PIS+ +GTGT
Sbjct: 96 ITGLDEDFADVLRRS--KKPVYVVANKAETAERA-HTAAEFYALGLGDPYPISSQTGTGT 152
Query: 345 GELLDLVCSELK 356
G+LLD V +
Sbjct: 153 GDLLDEVVKHFQ 164
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 75/160 (46%), Gaps = 29/160 (18%)
Query: 159 PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDT 218
P+ +PR+AI+GRPNVGKS+ N L G R+IV + G TRD + R +F+L DT
Sbjct: 171 PDAGIPRIAILGRPNVGKSSFLNVLTGQERSIVTNIAGTTRDAINTRYKAYGKDFILTDT 230
Query: 219 GGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIF 278
G+ ++ NI E ++ +I A+E+S V I
Sbjct: 231 AGIRRKARVDSNI-EFYSVLRSI--------------------------KAMEDSDVCII 263
Query: 279 LVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
L+D GL A D I K K +++ VNK ++ K
Sbjct: 264 LLDATRGLEAQDLNIIGQAIK--AKKGVVIMVNKWDAIEK 301
>gi|357636396|ref|ZP_09134271.1| ribosome-associated GTPase EngA [Streptococcus macacae NCTC 11558]
gi|357584850|gb|EHJ52053.1| ribosome-associated GTPase EngA [Streptococcus macacae NCTC 11558]
Length = 436
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 106/194 (54%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y + W +F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSMLFNRIAGERISIVEDVEGVTRDRIYANANWLNRQFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA AI E+ VI+F+V
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAITEADVIVFVVSA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L + + K +ILAVNK ++P + +F++LG P P+S++ G
Sbjct: 93 KEGVTDADEYVAKILYRTH--KPVILAVNKVDNPEMR-NDIYDFYALGLGDPYPVSSVHG 149
Query: 342 TGTGELLDLVCSEL 355
GTG+LLD + L
Sbjct: 150 IGTGDLLDKIIESL 163
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 92/198 (46%), Gaps = 41/198 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
+ +++GRPNVGKS+L N ++G R I G TRD + +F EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEERVIASPLAGTTRDAI-DTTFTDAQGQEFTMIDTAGMR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A AI+ S +++ +++
Sbjct: 235 KSGKVYEN-------------------TEKYSVMR--------AKRAIDRSDIVLMVINA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPL 334
+ G+ D+ IA + + K I++ VNK ++ +K ++ +F + ++P+
Sbjct: 268 EEGIREYDKRIAGFAHE--AGKGIVILVNKWDTIKKDNHTMAQWETDIREQFQYIPYAPI 325
Query: 335 P-ISAISGTGTGELLDLV 351
+SA++ +L D++
Sbjct: 326 VFVSALTKQRLHKLPDMI 343
>gi|339443166|ref|YP_004709171.1| hypothetical protein CXIVA_21020 [Clostridium sp. SY8519]
gi|338902567|dbj|BAK48069.1| hypothetical protein CXIVA_21020 [Clostridium sp. SY8519]
Length = 442
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/195 (41%), Positives = 106/195 (54%), Gaps = 32/195 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN L G +IV D PGVTRDR+Y W H F L+DTGG+
Sbjct: 4 PVVAVVGRPNVGKSTLFNALAGERISIVEDTPGVTRDRIYADVEWLNHPFTLIDTGGIEP 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
SK D+ + S + QA AI + VIIF+ D
Sbjct: 64 DSK-------DIIL----------------------SQMREQAEIAIASADVIIFMTDVH 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL AD ++AD LR+++ K +IL VNK +S +K + V EF++LG P PISA S
Sbjct: 95 QGLIDADAKVADLLRRSH--KPVILVVNKVDSFQKMMPDVYEFYNLGIGDPHPISAASRL 152
Query: 343 GTGELLDLVCSELKK 357
G G++L+ V + K
Sbjct: 153 GLGDMLEAVVAHFPK 167
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 95/197 (48%), Gaps = 38/197 (19%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P+VAI+G+PNVGKS+L NRL G +R IV D G TRD + + E++ +DT G+
Sbjct: 178 PKVAIIGKPNVGKSSLINRLSGDSRVIVSDIAGTTRDAIDTDISYNGREYVFIDTAGLRR 237
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+K + I E +I +A A+E + V++ L+D
Sbjct: 238 KNKIKEEI-ERFSII--------------------------RAVTAVERADVVVILIDAV 270
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF-----WSLGFSP----L 334
G+T D +IA + K II+AVNK ++ K V ++ +L F P +
Sbjct: 271 EGVTEQDAKIAGIAHER--GKGIIVAVNKWDAIEKTDKSVYQYTDRIRQTLSFMPYAEIM 328
Query: 335 PISAISGTGTGELLDLV 351
ISA +G +L D++
Sbjct: 329 FISAKTGQRVSKLFDMI 345
>gi|320529134|ref|ZP_08030226.1| ribosome-associated GTPase EngA [Selenomonas artemidis F0399]
gi|320138764|gb|EFW30654.1| ribosome-associated GTPase EngA [Selenomonas artemidis F0399]
Length = 441
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 111/194 (57%), Gaps = 33/194 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN++ +IV D PGVTRDR+Y + W HEF ++DTGG
Sbjct: 4 PIVAVVGRPNVGKSTLFNQIGKKRVSIVDDMPGVTRDRIYMDAEWLNHEFTIIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I + + M S QA A+EE+ VI+FLVDG+
Sbjct: 61 ----------------------IEFDESDHILRSMRS----QAELAMEEADVILFLVDGR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
AGLTA+DEE+ LR+ +K +ILAVNK +S + + + +F++LG P+PISA +
Sbjct: 95 AGLTASDEEVGRLLRRT--NKPVILAVNKIDSFERESL-IYDFYALGLGDPIPISASNAM 151
Query: 343 GTGELLDLVCSELK 356
G+LLD V + +
Sbjct: 152 NLGDLLDAVVAAFR 165
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 92/196 (46%), Gaps = 39/196 (19%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+A+VGRPNVGKS+L NRL+G R IV D PG TRD + +++L+DT G+
Sbjct: 179 IAVVGRPNVGKSSLVNRLLGEERVIVSDVPGTTRDAIDTHFTRDGAKYLLIDTAGMRRKG 238
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
K I L +V R + AI+ + V++ +++ G
Sbjct: 239 K-------------------ITLPVERYSVMR--------SLRAIDRAGVVLMVINAAEG 271
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKC----ESPRKGIMQVS-----EFWSLGFSP-LP 335
+ D +IA ++ ++ K +I+ VNK E K ++ + E L ++P L
Sbjct: 272 ILEQDTKIAGYVHES--GKGVIIVVNKWDIFPEKNDKSTLRFTDDLREELGFLQYAPVLY 329
Query: 336 ISAISGTGTGELLDLV 351
SA++G + +LV
Sbjct: 330 TSALTGQRVERVTELV 345
>gi|408372254|ref|ZP_11169996.1| GTP-binding protein Der [Galbibacter sp. ck-I2-15]
gi|407742324|gb|EKF53929.1| GTP-binding protein Der [Galbibacter sp. ck-I2-15]
Length = 434
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/198 (40%), Positives = 111/198 (56%), Gaps = 33/198 (16%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRL+ AIV + GVTRDR YG++ W EF ++DTGG +
Sbjct: 5 VAIVGRPNVGKSTLFNRLIKRRDAIVDEISGVTRDRHYGKTDWNGREFSVIDTGGYV--- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+G + I I++Q A++E+ IIF+VD G
Sbjct: 62 ---------------VGSDDI-----------FEQEIDKQVELALDEADAIIFVVDVATG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP-LPISAISGTGT 344
+T DEE+A LR+ +DK I +AVNK +S + + +EF++LG IS+I+G+GT
Sbjct: 96 VTGMDEEVAQLLRQ--VDKPIFMAVNKVDSAMR-VADAAEFYALGLGDYYTISSINGSGT 152
Query: 345 GELLDLVCSELKKVEVCI 362
GELLD V L + E I
Sbjct: 153 GELLDAVVEALPEDEGAI 170
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 83/187 (44%), Gaps = 35/187 (18%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
E LPR A+VGRPN GKS+ N L+G +R IV D G TRD + + EF LVDT
Sbjct: 171 EDELPRFAVVGRPNAGKSSFINALLGEDRYIVTDIAGTTRDSVDTKYNRFGFEFNLVDTA 230
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G+ + + + EDL T + ++ AIE S V + +
Sbjct: 231 GI----RRKAKVKEDLEFYTVM-----------------------RSVRAIEHSDVCLLV 263
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSL------GFSP 333
+D G D I WL + K I++ VNK + K V EF + F+
Sbjct: 264 LDATRGFEGQDLNIF-WLAERNR-KGIVILVNKWDLVEKQTNTVKEFETYIRKQIEPFTD 321
Query: 334 LPISAIS 340
+PI IS
Sbjct: 322 VPIVFIS 328
>gi|414564722|ref|YP_006043683.1| GTP-binding protein EngA [Streptococcus equi subsp. zooepidemicus
ATCC 35246]
gi|338847787|gb|AEJ25999.1| GTP-binding protein EngA [Streptococcus equi subsp. zooepidemicus
ATCC 35246]
Length = 446
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 109/201 (54%), Gaps = 34/201 (16%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 12 VLPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTTGEWLNRQFSLIDTGGI 71
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+V A I+ QA A++E+ VI+F+V
Sbjct: 72 DDVD------------------------------APFMEQIKHQAHIAMDEADVIVFVVS 101
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE ++ L + +K +IL VNK ++P + +F+SLG P P+S++
Sbjct: 102 GKEGVTDADEYVSKLLYRT--NKPVILVVNKVDNPEMR-NDIYDFYSLGLGDPFPVSSVH 158
Query: 341 GTGTGELLDLVCSELKKVEVC 361
G GTG++LD + L E+
Sbjct: 159 GIGTGDVLDAIIDNLPVEEIV 179
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 89/198 (44%), Gaps = 41/198 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
R +++GRPNVGKS+L N ++G R I G TRD + SF E + ++DT G+
Sbjct: 186 RFSLIGRPNVGKSSLINAILGEERVIASPVAGTTRDAI-DTSFTDESGQAYTMIDTAGMR 244
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A AI+ S +++ +++
Sbjct: 245 KSGKVYEN-------------------TEKYSVMR--------AMRAIDRSDIVLMVINA 277
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPL 334
+ G+ D+ IA + + K +I+ VNK ++ K V+ +F L ++P+
Sbjct: 278 EEGIRDYDKRIAGFAHE--AGKGMIIVVNKWDTIEKDNHTVARWEADIRDQFQFLTYAPI 335
Query: 335 P-ISAISGTGTGELLDLV 351
+SA++ L L+
Sbjct: 336 IFVSAVTKQRLNRLPQLI 353
>gi|322691264|ref|YP_004220834.1| GTP-binding protein [Bifidobacterium longum subsp. longum JCM 1217]
gi|419847689|ref|ZP_14370855.1| cytidylate kinase / ribosome-associated GTPase EngA multi-domain
protein [Bifidobacterium longum subsp. longum 1-6B]
gi|419849857|ref|ZP_14372879.1| cytidylate kinase / ribosome-associated GTPase EngA multi-domain
protein [Bifidobacterium longum subsp. longum 35B]
gi|419854709|ref|ZP_14377490.1| cytidylate kinase / ribosome-associated GTPase EngA multi-domain
protein [Bifidobacterium longum subsp. longum 44B]
gi|320456120|dbj|BAJ66742.1| GTP-binding protein [Bifidobacterium longum subsp. longum JCM 1217]
gi|386410523|gb|EIJ25304.1| cytidylate kinase / ribosome-associated GTPase EngA multi-domain
protein [Bifidobacterium longum subsp. longum 1-6B]
gi|386410811|gb|EIJ25583.1| cytidylate kinase / ribosome-associated GTPase EngA multi-domain
protein [Bifidobacterium longum subsp. longum 35B]
gi|386417367|gb|EIJ31851.1| cytidylate kinase / ribosome-associated GTPase EngA multi-domain
protein [Bifidobacterium longum subsp. longum 44B]
Length = 709
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 116/231 (50%), Gaps = 37/231 (16%)
Query: 136 DETDDRKDSGKKQKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEP 195
DE D+ SG+ + G P +L A+VGRPNVGKS+L NR++G A+V D P
Sbjct: 248 DEGDEDLISGRGFTEGARKAGPKPVGVL---AVVGRPNVGKSSLVNRILGRRAAVVEDTP 304
Query: 196 GVTRDRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAV 255
GVTRDR+ + W +F LVDTGG EA V
Sbjct: 305 GVTRDRVSYDAEWAGTDFKLVDTGGW------------------------------EADV 334
Query: 256 ARMPSMIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCES 315
+ S I QA A+ + ++F+VDGQ G+T DE I LR K ++LAVNK +
Sbjct: 335 EGIESAIASQAQVAVTLADAVVFVVDGQVGMTTTDERIVKMLRA--AGKPVVLAVNKIDD 392
Query: 316 PRKGIMQVSEFWSLGFS-PLPISAISGTGTGELLDLVCSELKKVEVCIGFL 365
+ +EFW LG P ISA+ G G G+LLD+ +LK+ E G+L
Sbjct: 393 QASEYL-AAEFWKLGLGEPYSISAMHGRGVGDLLDVALDKLKQAEKTSGYL 442
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 44/75 (58%)
Query: 147 KQKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRS 206
K K+ + T G + L RVA+VGRPNVGKS+L N+L RA+V D G TRD +
Sbjct: 431 KLKQAEKTSGYLTPSGLRRVALVGRPNVGKSSLLNQLAREERAVVNDLAGTTRDPVDEIV 490
Query: 207 FWGEHEFMLVDTGGV 221
+++ +DT G+
Sbjct: 491 NIDGEDWLFIDTAGI 505
>gi|322689198|ref|YP_004208932.1| GTP-binding protein [Bifidobacterium longum subsp. infantis 157F]
gi|320460534|dbj|BAJ71154.1| GTP-binding protein [Bifidobacterium longum subsp. infantis 157F]
Length = 709
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 116/231 (50%), Gaps = 37/231 (16%)
Query: 136 DETDDRKDSGKKQKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEP 195
DE D+ SG+ + G P +L A+VGRPNVGKS+L NR++G A+V D P
Sbjct: 248 DEGDEDLISGRGFTEGARKAGPKPVGVL---AVVGRPNVGKSSLVNRILGRRAAVVEDTP 304
Query: 196 GVTRDRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAV 255
GVTRDR+ + W +F LVDTGG EA V
Sbjct: 305 GVTRDRVSYDAEWAGTDFKLVDTGGW------------------------------EADV 334
Query: 256 ARMPSMIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCES 315
+ S I QA A+ + ++F+VDGQ G+T DE I LR K ++LAVNK +
Sbjct: 335 EGIESAIASQAQVAVTLADAVVFVVDGQVGMTTTDERIVKMLRA--AGKPVVLAVNKIDD 392
Query: 316 PRKGIMQVSEFWSLGFS-PLPISAISGTGTGELLDLVCSELKKVEVCIGFL 365
+ +EFW LG P ISA+ G G G+LLD+ +LK+ E G+L
Sbjct: 393 QASEYL-AAEFWKLGLGEPYSISAMHGRGVGDLLDVALDKLKQAEKTSGYL 442
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 44/75 (58%)
Query: 147 KQKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRS 206
K K+ + T G + L RVA+VGRPNVGKS+L N+L RA+V D G TRD +
Sbjct: 431 KLKQAEKTSGYLTPSGLRRVALVGRPNVGKSSLLNQLAREERAVVNDLAGTTRDPVDEIV 490
Query: 207 FWGEHEFMLVDTGGV 221
+++ +DT G+
Sbjct: 491 NIDGEDWLFIDTAGI 505
>gi|195978761|ref|YP_002124005.1| GTP-binding protein EngA [Streptococcus equi subsp. zooepidemicus
MGCS10565]
gi|195975466|gb|ACG62992.1| GTP-binding protein EngA [Streptococcus equi subsp. zooepidemicus
MGCS10565]
Length = 446
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 109/201 (54%), Gaps = 34/201 (16%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 12 VLPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTTGEWLNRQFSLIDTGGI 71
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+V A I+ QA A++E+ VI+F+V
Sbjct: 72 DDVD------------------------------APFMEQIKHQAHIAMDEADVIVFVVS 101
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE ++ L + +K +IL VNK ++P + +F+SLG P P+S++
Sbjct: 102 GKEGVTDADEYVSKLLYRT--NKPVILVVNKVDNPEMR-NDIYDFYSLGLGDPFPVSSVH 158
Query: 341 GTGTGELLDLVCSELKKVEVC 361
G GTG++LD + L E+
Sbjct: 159 GIGTGDVLDAIIDNLPVEEIV 179
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 90/198 (45%), Gaps = 41/198 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
R +++GRPNVGKS+L N ++G R I G TRD + SF E + ++DT G+
Sbjct: 186 RFSLIGRPNVGKSSLINAILGEERVIASPVAGTTRDAI-DTSFTDESGQAYTMIDTAGMR 244
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A AI+ S +++ +++
Sbjct: 245 KSGKVYEN-------------------TEKYSVMR--------AMRAIDRSDIVLMVINA 277
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPL 334
+ G+ D+ IA + + K +I+ VNK ++ K V+ +F L ++P+
Sbjct: 278 EEGIRDYDKRIAGFAHE--AGKGMIIVVNKWDTIEKDNHTVARWEADIRDQFQFLTYAPI 335
Query: 335 P-ISAISGTGTGELLDLV 351
+SA++ L +L+
Sbjct: 336 IFVSAVTKQRLNRLPELI 353
>gi|225867922|ref|YP_002743870.1| GTP-binding protein EngA [Streptococcus equi subsp. zooepidemicus]
gi|225701198|emb|CAW98121.1| GTP-binding protein EngA [Streptococcus equi subsp. zooepidemicus]
Length = 446
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 109/201 (54%), Gaps = 34/201 (16%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 12 VLPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTTGEWLNRQFSLIDTGGI 71
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+V A I+ QA A++E+ VI+F+V
Sbjct: 72 DDVD------------------------------APFMEQIKHQAHIAMDEADVIVFVVS 101
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE ++ L + +K +IL VNK ++P + +F+SLG P P+S++
Sbjct: 102 GKEGVTDADEYVSKLLYRT--NKPVILVVNKVDNPEMR-NDIYDFYSLGLGDPFPVSSVH 158
Query: 341 GTGTGELLDLVCSELKKVEVC 361
G GTG++LD + L E+
Sbjct: 159 GIGTGDVLDAIIDNLPVEEIV 179
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 90/198 (45%), Gaps = 41/198 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
R +++GRPNVGKS+L N ++G R I G TRD + SF E + ++DT G+
Sbjct: 186 RFSLIGRPNVGKSSLINAILGEERVIASPVAGTTRDAI-DTSFTDESGQAYTMIDTAGMR 244
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A AI+ S +++ +++
Sbjct: 245 KSGKVYEN-------------------TEKYSVMR--------AMRAIDRSDIVLMVINA 277
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPL 334
+ G+ D+ IA + + K +I+ VNK ++ K V+ +F L ++P+
Sbjct: 278 EEGIRDYDKRIAGFAHE--AGKGMIIVVNKWDTIEKDNHTVARWEADIRDQFQFLTYAPI 335
Query: 335 P-ISAISGTGTGELLDLV 351
+SA++ L +L+
Sbjct: 336 IFVSAVTKQRLNRLPELI 353
>gi|422758324|ref|ZP_16812086.1| GTP-binding protein EngA [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
gi|322411159|gb|EFY02067.1| GTP-binding protein EngA [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
Length = 436
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/200 (38%), Positives = 109/200 (54%), Gaps = 34/200 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR+ G +IV + GVTRDR+Y W +F L+DTGG+
Sbjct: 2 VLPTVAIVGRPNVGKSTLFNRIAGERISIVENVEGVTRDRIYATGEWLNRQFSLIDTGGI 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+V A I+ QA A+EE+ VI+F+V
Sbjct: 62 DDVD------------------------------APFMEQIKNQAQIAMEEADVIVFVVS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE ++ L + + +ILAVNK ++P + +F+SLG P P+S++
Sbjct: 92 GKEGVTDADEYVSKILYRT--NTPVILAVNKVDNPEMR-NDIYDFYSLGLGDPYPVSSVH 148
Query: 341 GTGTGELLDLVCSELKKVEV 360
G GTG++LD + L EV
Sbjct: 149 GIGTGDILDAIVENLPVEEV 168
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 91/197 (46%), Gaps = 39/197 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
R +++GRPNVGKS+L N ++G +R I G TRD + + EF ++DT G+
Sbjct: 176 RFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTHFTDADGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S V++ +++ +
Sbjct: 236 SGKIYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVINAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPLP 335
G+ D+ IA + + K +I+ VNK ++ K V+ +F L ++P+
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGMIIVVNKWDTIDKDNHTVAQWEADIRDQFQFLAYAPII 326
Query: 336 -ISAISGTGTGELLDLV 351
+SA++ +L +L+
Sbjct: 327 FVSALTKQRLNKLPELI 343
>gi|189439326|ref|YP_001954407.1| bifunctional cytidylate kinase/GTP-binding protein [Bifidobacterium
longum DJO10A]
gi|312132698|ref|YP_004000037.1| cmk [Bifidobacterium longum subsp. longum BBMN68]
gi|189427761|gb|ACD97909.1| Cytidylate kinase [Bifidobacterium longum DJO10A]
gi|311773657|gb|ADQ03145.1| Cmk [Bifidobacterium longum subsp. longum BBMN68]
Length = 709
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 116/231 (50%), Gaps = 37/231 (16%)
Query: 136 DETDDRKDSGKKQKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEP 195
DE D+ SG+ + G P +L A+VGRPNVGKS+L NR++G A+V D P
Sbjct: 248 DEGDEDLISGRGFTEGARKAGPKPVGVL---AVVGRPNVGKSSLVNRILGRRAAVVEDTP 304
Query: 196 GVTRDRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAV 255
GVTRDR+ + W +F LVDTGG EA V
Sbjct: 305 GVTRDRVSYDAEWAGTDFKLVDTGGW------------------------------EADV 334
Query: 256 ARMPSMIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCES 315
+ S I QA A+ + ++F+VDGQ G+T DE I LR K ++LAVNK +
Sbjct: 335 EGIESAIASQAQVAVTLADAVVFVVDGQVGMTTTDERIVKMLRA--AGKPVVLAVNKIDD 392
Query: 316 PRKGIMQVSEFWSLGFS-PLPISAISGTGTGELLDLVCSELKKVEVCIGFL 365
+ +EFW LG P ISA+ G G G+LLD+ +LK+ E G+L
Sbjct: 393 QASEYL-AAEFWKLGLGEPYSISAMHGRGVGDLLDVALDKLKQAEKTSGYL 442
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 44/75 (58%)
Query: 147 KQKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRS 206
K K+ + T G + L RVA+VGRPNVGKS+L N+L RA+V D G TRD +
Sbjct: 431 KLKQAEKTSGYLTPSGLRRVALVGRPNVGKSSLLNQLAREERAVVNDLAGTTRDPVDEIV 490
Query: 207 FWGEHEFMLVDTGGV 221
+++ +DT G+
Sbjct: 491 NIDGEDWLFIDTAGI 505
>gi|332799113|ref|YP_004460612.1| GTP-binding protein engA [Tepidanaerobacter acetatoxydans Re1]
gi|438002226|ref|YP_007271969.1| GTP-binding protein EngA [Tepidanaerobacter acetatoxydans Re1]
gi|332696848|gb|AEE91305.1| GTP-binding protein engA [Tepidanaerobacter acetatoxydans Re1]
gi|432179020|emb|CCP25993.1| GTP-binding protein EngA [Tepidanaerobacter acetatoxydans Re1]
Length = 439
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 111/193 (57%), Gaps = 33/193 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VA+VG+PNVGKS LFNR++G +IV D+PGVTRDR+YG + W +F +VDTGGV S
Sbjct: 5 VAVVGKPNVGKSTLFNRIIGKRISIVDDKPGVTRDRIYGEAEWNGKKFTMVDTGGVEPAS 64
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
K D+ + S ++RQA AIE + +I+F+VDG+ G
Sbjct: 65 K-------DIIL----------------------SQMKRQADFAIETANLILFMVDGKEG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
LT D ++A LR++ K ++L VNK ++ EF+ LGF P+ ISA+ G
Sbjct: 96 LTPTDLDVAQILRRS--GKPVLLVVNKVDNYTNTAYDY-EFYKLGFGDPIFISAVHGLAV 152
Query: 345 GELLDLVCSELKK 357
G+LLD + +++
Sbjct: 153 GDLLDKITDYIEE 165
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VAI+G+PNVGKS+L N ++G R IV D PG TRD + + + +DT G+
Sbjct: 177 KVAIIGKPNVGKSSLLNAILGEERVIVSDIPGTTRDAIDSYFEINGKKMLFIDTAGL--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + I ED+ +T+ +A AI+ + V++ ++D
Sbjct: 234 -RKKSRISEDVEYYSTV-----------------------RALGAIDRADVVLMVLDASQ 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS--------LGFSPLP- 335
++ D+ IA + K +I+ VNK + K EF + ++P+
Sbjct: 270 NISEQDKRIAGIAHE--AGKAVIIIVNKWDLIDKDSHTTDEFSKKIKNELAFMQYAPIVY 327
Query: 336 ISAISGTGTGELLDLV 351
+SA +G G +L+L+
Sbjct: 328 VSAKTGQRVGRILELI 343
>gi|335048450|ref|ZP_08541470.1| ribosome biogenesis GTPase Der [Parvimonas sp. oral taxon 110 str.
F0139]
gi|333758250|gb|EGL35808.1| ribosome biogenesis GTPase Der [Parvimonas sp. oral taxon 110 str.
F0139]
Length = 441
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 108/193 (55%), Gaps = 33/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P V +VGRPNVGKS LFN+L+ AI D PGVTRDR+Y + W F+L DTGG+
Sbjct: 4 PLVCVVGRPNVGKSTLFNKLINKRIAITEDTPGVTRDRLYQDAEWQNKHFILCDTGGL-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+PN +D+ + I+ QA A+E + VI+F+VDG+
Sbjct: 62 ----EPN-SDDIIL----------------------QKIKAQADVAMENADVILFVVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLP-ISAISGT 342
+GL D EI+++LR+ K ++LAVNK ++ K +V EF+ LGF L ISA G
Sbjct: 95 SGLMDEDREISNYLRRT--KKPVVLAVNKVDT-HKMPAEVYEFYELGFENLNIISATQGF 151
Query: 343 GTGELLDLVCSEL 355
G G+LLD + E
Sbjct: 152 GLGDLLDEIIKEF 164
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 34/202 (16%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
E + ++A++G+PNVGKS+L NR++G R IV D G TRD + R ++ DT
Sbjct: 173 EDEVTKIALIGKPNVGKSSLMNRILGEERMIVSDIAGTTRDSIDSRVEIDGKTYIFTDTA 232
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G+ + + NI E+L +V R + +ER S + I L
Sbjct: 233 GL----RRKKNITENL---------------ERYSVVRTLNAVER--------SDIAILL 265
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF-----WSLGFSPL 334
+D G+T D ++ + ++ +K +I+AVNK + K F L F P
Sbjct: 266 IDATEGVTEQDTKVIGFAKE--QNKSLIIAVNKWDLIVKDNKTYKAFEDDIRTKLSFVPY 323
Query: 335 PISAISGTGTGELLDLVCSELK 356
TG+ +D + +K
Sbjct: 324 AQLVFISVKTGQRIDKLFEAIK 345
>gi|260773381|ref|ZP_05882297.1| GTP-binding protein EngA [Vibrio metschnikovii CIP 69.14]
gi|260612520|gb|EEX37723.1| GTP-binding protein EngA [Vibrio metschnikovii CIP 69.14]
Length = 496
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 112/199 (56%), Gaps = 41/199 (20%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YG++ GE+EF+++DTGG+
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGENEFIVIDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+G T E +M +Q+ AAI+E+ V++F+VD
Sbjct: 61 ----------------------DG----TEEGVETKMA----QQSLAAIDEADVVLFMVD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSP--LPI 336
G+AGLT+ADE IA LR+ ++K IL VNK + GI +EFW LG I
Sbjct: 91 GRAGLTSADEAIAQHLRR--IEKNAILVVNKVD----GIDADAACAEFWQLGMGSQMYQI 144
Query: 337 SAISGTGTGELLDLVCSEL 355
+A G G L+D + L
Sbjct: 145 AAAHGRGVAVLIDRALNPL 163
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 100/220 (45%), Gaps = 40/220 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS L NR++G R +V D PG TRD +Y + E++L+DT GV
Sbjct: 209 KLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMQRDDREYVLIDTAGVRR- 267
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
KS +E ++ T+ AIE++ V++ ++D +
Sbjct: 268 RKSINETVEKFSVVKTL--------------------------KAIEDANVVLLVIDARE 301
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF---WSLGFSPLP----IS 337
++ D + + + +++A+NK + I + + LGF IS
Sbjct: 302 NISDQDLSLLGFTLN--AGRSVVIAINKWDGLSNDIKERVKKELDRRLGFVDFARIHFIS 359
Query: 338 AISGTGTGELLDLVCSELKKVEVCIGFLLICNAITKIFHI 377
A+ GTG G L + V + +G + +T+I +
Sbjct: 360 ALHGTGVGHLFESVQEAYRSATTRVG----TSVLTRIMKM 395
>gi|161485602|ref|NP_695919.2| bifunctional cytidylate kinase/GTP-binding protein [Bifidobacterium
longum NCC2705]
gi|317483249|ref|ZP_07942244.1| ribosome-associated GTPase EngA [Bifidobacterium sp. 12_1_47BFAA]
gi|384201501|ref|YP_005587248.1| bifunctional cytidylate kinase/GTP-binding protein [Bifidobacterium
longum subsp. longum KACC 91563]
gi|316915318|gb|EFV36745.1| ribosome-associated GTPase EngA [Bifidobacterium sp. 12_1_47BFAA]
gi|338754508|gb|AEI97497.1| bifunctional cytidylate kinase/GTP-binding protein [Bifidobacterium
longum subsp. longum KACC 91563]
Length = 709
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 116/231 (50%), Gaps = 37/231 (16%)
Query: 136 DETDDRKDSGKKQKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEP 195
DE D+ SG+ + G P +L A+VGRPNVGKS+L NR++G A+V D P
Sbjct: 248 DEGDEDLISGRGFTEGARKAGPKPVGVL---AVVGRPNVGKSSLVNRILGRRAAVVEDTP 304
Query: 196 GVTRDRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAV 255
GVTRDR+ + W +F LVDTGG EA V
Sbjct: 305 GVTRDRVSYDAEWAGTDFKLVDTGGW------------------------------EADV 334
Query: 256 ARMPSMIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCES 315
+ S I QA A+ + ++F+VDGQ G+T DE I LR K ++LAVNK +
Sbjct: 335 EGIESAIASQAQVAVTLADAVVFVVDGQVGMTTTDERIVKMLRA--AGKPVVLAVNKIDD 392
Query: 316 PRKGIMQVSEFWSLGFS-PLPISAISGTGTGELLDLVCSELKKVEVCIGFL 365
+ +EFW LG P ISA+ G G G+LLD+ +LK+ E G+L
Sbjct: 393 QASEYL-AAEFWKLGLGEPYSISAMHGRGVGDLLDVALDKLKQAEKTSGYL 442
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 44/75 (58%)
Query: 147 KQKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRS 206
K K+ + T G + L RVA+VGRPNVGKS+L N+L RA+V D G TRD +
Sbjct: 431 KLKQAEKTSGYLTPSGLRRVALVGRPNVGKSSLLNQLAREERAVVNDLAGTTRDPVDEIV 490
Query: 207 FWGEHEFMLVDTGGV 221
+++ +DT G+
Sbjct: 491 NIDGEDWLFIDTAGI 505
>gi|120437317|ref|YP_863003.1| GTP-binding protein EngA [Gramella forsetii KT0803]
gi|166198719|sp|A0M5P1.1|DER_GRAFK RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|117579467|emb|CAL67936.1| GTP-binding protein EngA [Gramella forsetii KT0803]
Length = 434
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 112/191 (58%), Gaps = 33/191 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS FNRL+ AI+ GVTRDR YG+S W +F L+DTGG +
Sbjct: 5 VAIVGRPNVGKSTFFNRLIQRREAIIDSVSGVTRDRHYGKSDWNGKKFSLIDTGGYV--- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
K +I E + I++Q AI+E+ IIF+VD ++G
Sbjct: 62 KGSDDIFE--------------------------AEIDKQVELAIDEADAIIFIVDVESG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP-LPISAISGTGT 344
+T+ DEE+A+ LR+ ++K ++LAVNK ++ ++ + EF+SLG PI++ +G+GT
Sbjct: 96 VTSMDEEVANLLRR--VNKPVLLAVNKVDNNKR-LANAVEFYSLGLGEYFPIASTNGSGT 152
Query: 345 GELLDLVCSEL 355
G+LLD + L
Sbjct: 153 GDLLDALIEAL 163
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 83/184 (45%), Gaps = 35/184 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LPR A+VGRPN GKS+ N L+G +R IV D G TRD + R EF LVDT G+
Sbjct: 174 LPRFAVVGRPNAGKSSFINALIGEDRYIVTDIAGTTRDSIDTRYNRFGFEFNLVDTAGIR 233
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
SK + E+L + + ++ AIE V + ++D
Sbjct: 234 RKSK----VKENLEFYSVM-----------------------RSVRAIENCDVCLVVLDA 266
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSL------GFSPLPI 336
G + I ++N+ K I++ VNK + K + E+ ++ F+ +PI
Sbjct: 267 TRGFDGQVQNIFWLAQRNH--KGIVILVNKWDLVDKETNTMKEYEAMIRREIEPFTDVPI 324
Query: 337 SAIS 340
IS
Sbjct: 325 VFIS 328
>gi|22537760|ref|NP_688611.1| GTP-binding protein EngA [Streptococcus agalactiae 2603V/R]
gi|76788647|ref|YP_330237.1| GTP-binding protein EngA [Streptococcus agalactiae A909]
gi|76798461|ref|ZP_00780699.1| GTP-binding protein engA [Streptococcus agalactiae 18RS21]
gi|77408494|ref|ZP_00785232.1| GTP-binding protein, Era/ThdF family [Streptococcus agalactiae
COH1]
gi|77411928|ref|ZP_00788259.1| GTP-binding protein, Era/ThdF family [Streptococcus agalactiae
CJB111]
gi|406710001|ref|YP_006764727.1| GTP-binding protein EngA [Streptococcus agalactiae GD201008-001]
gi|421148062|ref|ZP_15607734.1| GTP-binding protein Der [Streptococcus agalactiae GB00112]
gi|424048933|ref|ZP_17786484.1| GTP-binding protein Der [Streptococcus agalactiae ZQ0910]
gi|41017044|sp|Q8DY73.1|DER_STRA5 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|123601399|sp|Q3JZR6.1|DER_STRA1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|22534651|gb|AAN00484.1|AE014265_13 phosphoglycerate dehydrogenase-related protein [Streptococcus
agalactiae 2603V/R]
gi|76563704|gb|ABA46288.1| GTP-binding protein EngA, putative [Streptococcus agalactiae A909]
gi|76586195|gb|EAO62715.1| GTP-binding protein engA [Streptococcus agalactiae 18RS21]
gi|77162025|gb|EAO73005.1| GTP-binding protein, Era/ThdF family [Streptococcus agalactiae
CJB111]
gi|77172936|gb|EAO76067.1| GTP-binding protein, Era/ThdF family [Streptococcus agalactiae
COH1]
gi|389649702|gb|EIM71178.1| GTP-binding protein Der [Streptococcus agalactiae ZQ0910]
gi|401685400|gb|EJS81408.1| GTP-binding protein Der [Streptococcus agalactiae GB00112]
gi|406650886|gb|AFS46287.1| GTP-binding protein EngA [Streptococcus agalactiae GD201008-001]
Length = 436
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/195 (39%), Positives = 107/195 (54%), Gaps = 34/195 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 2 VLPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTTGEWLNRKFSLIDTGGI 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+V A I+ QA A+ E+ VI+F+V
Sbjct: 62 DDVD------------------------------APFMEQIKHQADIAMTEADVIVFVVS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE ++ L K +K +ILAVNK ++P + +F+SLG P P+S++
Sbjct: 92 GKEGVTDADEYVSRILYKT--NKPVILAVNKVDNPEMR-NDIYDFYSLGLGDPYPLSSVH 148
Query: 341 GTGTGELLDLVCSEL 355
G GTG++LD + L
Sbjct: 149 GIGTGDILDAIVENL 163
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 81/179 (45%), Gaps = 38/179 (21%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
R +++GRPNVGKS+L N ++G +R I G TRD + + E+ ++DT G+
Sbjct: 176 RFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTNFVDSQGQEYTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R + AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------SMRAIDRSDVVLMVINAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSE--------FWSLGFSPL 334
G+ D+ IA + + K II+ VNK ++ K VS+ F L ++P+
Sbjct: 269 EGIREYDKRIAGFAHET--GKGIIIVVNKWDTIEKDNHTVSQWEADIRDNFQFLSYAPI 325
>gi|239621484|ref|ZP_04664515.1| bifunctional cytidylate kinase/GTP-binding protein [Bifidobacterium
longum subsp. infantis CCUG 52486]
gi|239515945|gb|EEQ55812.1| bifunctional cytidylate kinase/GTP-binding protein [Bifidobacterium
longum subsp. infantis CCUG 52486]
Length = 698
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 116/231 (50%), Gaps = 37/231 (16%)
Query: 136 DETDDRKDSGKKQKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEP 195
DE D+ SG+ + G P +L A+VGRPNVGKS+L NR++G A+V D P
Sbjct: 237 DEGDEDLISGRGFTEGARKAGPKPVGVL---AVVGRPNVGKSSLVNRILGRRAAVVEDTP 293
Query: 196 GVTRDRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAV 255
GVTRDR+ + W +F LVDTGG EA V
Sbjct: 294 GVTRDRVSYDAEWAGTDFKLVDTGGW------------------------------EADV 323
Query: 256 ARMPSMIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCES 315
+ S I QA A+ + ++F+VDGQ G+T DE I LR K ++LAVNK +
Sbjct: 324 EGIESAIASQAQVAVTLADAVVFVVDGQVGMTTTDERIVKMLRA--AGKPVVLAVNKIDD 381
Query: 316 PRKGIMQVSEFWSLGFS-PLPISAISGTGTGELLDLVCSELKKVEVCIGFL 365
+ +EFW LG P ISA+ G G G+LLD+ +LK+ E G+L
Sbjct: 382 QASEYL-AAEFWKLGLGEPYSISAMHGRGVGDLLDVALDKLKQAEKTSGYL 431
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 44/75 (58%)
Query: 147 KQKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRS 206
K K+ + T G + L RVA+VGRPNVGKS+L N+L RA+V D G TRD +
Sbjct: 420 KLKQAEKTSGYLTPSGLRRVALVGRPNVGKSSLLNQLAREERAVVNDLAGTTRDPVDEIV 479
Query: 207 FWGEHEFMLVDTGGV 221
+++ +DT G+
Sbjct: 480 NIDGEDWLFIDTAGI 494
>gi|160946385|ref|ZP_02093594.1| hypothetical protein PEPMIC_00345 [Parvimonas micra ATCC 33270]
gi|158447501|gb|EDP24496.1| ribosome biogenesis GTPase Der [Parvimonas micra ATCC 33270]
Length = 441
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 108/193 (55%), Gaps = 33/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P V +VGRPNVGKS LFN+L+ AI D PGVTRDR+Y + W F+L DTGG+
Sbjct: 4 PLVCVVGRPNVGKSTLFNKLINKRIAITEDTPGVTRDRLYQDAEWQNKHFILCDTGGL-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+PN +D+ + I+ QA A+E + VI+F+VDG+
Sbjct: 62 ----EPN-SDDIIL----------------------QKIKAQADVAMENADVILFVVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLP-ISAISGT 342
+GL D EI+++LR+ K ++LAVNK ++ K +V EF+ LGF L ISA G
Sbjct: 95 SGLMDEDREISNYLRRT--KKPVVLAVNKVDT-HKMPAEVYEFYELGFENLNIISATQGF 151
Query: 343 GTGELLDLVCSEL 355
G G+LLD + E
Sbjct: 152 GLGDLLDEIIKEF 164
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 89/202 (44%), Gaps = 34/202 (16%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
E + ++A++G+PNVGKS+L NR++G R IV D G TRD + R ++ DT
Sbjct: 173 EDEVTKIALIGKPNVGKSSLMNRILGEERMIVSDIAGTTRDSIDSRVEIDGKTYIFTDTA 232
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G+ + + NI E+L + + + A+E S + I L
Sbjct: 233 GL----RRKRNITENLERYSVV-----------------------RTLNAVERSDIAILL 265
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF-----WSLGFSPL 334
+D G+T D ++ + ++ +K +I+AVNK + K F L F P
Sbjct: 266 IDATEGVTEQDTKVIGFAKE--QNKALIIAVNKWDLIVKDNKTYKAFEDDIRTKLSFVPY 323
Query: 335 PISAISGTGTGELLDLVCSELK 356
TG+ +D + +K
Sbjct: 324 AQLVFISVKTGQRIDKLFEAIK 345
>gi|46191228|ref|ZP_00206719.1| COG1160: Predicted GTPases [Bifidobacterium longum DJO10A]
Length = 597
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 116/231 (50%), Gaps = 37/231 (16%)
Query: 136 DETDDRKDSGKKQKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEP 195
DE D+ SG+ + G P +L A+VGRPNVGKS+L NR++G A+V D P
Sbjct: 136 DEGDEDLISGRGFTEGARKAGPKPVGVL---AVVGRPNVGKSSLVNRILGRRAAVVEDTP 192
Query: 196 GVTRDRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAV 255
GVTRDR+ + W +F LVDTGG EA V
Sbjct: 193 GVTRDRVSYDAEWAGTDFKLVDTGGW------------------------------EADV 222
Query: 256 ARMPSMIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCES 315
+ S I QA A+ + ++F+VDGQ G+T DE I LR K ++LAVNK +
Sbjct: 223 EGIESAIASQAQVAVTLADAVVFVVDGQVGMTTTDERIVKMLRA--AGKPVVLAVNKIDD 280
Query: 316 PRKGIMQVSEFWSLGFS-PLPISAISGTGTGELLDLVCSELKKVEVCIGFL 365
+ +EFW LG P ISA+ G G G+LLD+ +LK+ E G+L
Sbjct: 281 QASEYL-AAEFWKLGLGEPYSISAMHGRGVGDLLDVALDKLKQAEKTSGYL 330
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 44/75 (58%)
Query: 147 KQKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRS 206
K K+ + T G + L RVA+VGRPNVGKS+L N+L RA+V D G TRD +
Sbjct: 319 KLKQAEKTSGYLTPSGLRRVALVGRPNVGKSSLLNQLAREERAVVNDLAGTTRDPVDEIV 378
Query: 207 FWGEHEFMLVDTGGV 221
+++ +DT G+
Sbjct: 379 NIDGEDWLFIDTAGI 393
>gi|333908807|ref|YP_004482393.1| GTP-binding protein engA [Marinomonas posidonica IVIA-Po-181]
gi|333478813|gb|AEF55474.1| GTP-binding protein engA [Marinomonas posidonica IVIA-Po-181]
Length = 446
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 109/192 (56%), Gaps = 34/192 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P +A+VGRPNVGKS LFN+L A+V D PG+TRDR YG G HEF+++DTGG
Sbjct: 1 MIPVIALVGRPNVGKSTLFNQLTRSRDALVADYPGLTRDRKYGDGKVGGHEFIVIDTGG- 59
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+S + I E +A RQ+ AIEE+ ++FLVD
Sbjct: 60 --ISGDEQGIDEKMA---------------------------RQSLLAIEEADTVLFLVD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAIS 340
G+ GL ADE IA+ LR++ +K + L VNK + + I +++F+SLGF L PI+A
Sbjct: 91 GRHGLNPADEMIANHLRRS--NKPVTLVVNKTDGINEDIA-LADFYSLGFGELQPIAAAH 147
Query: 341 GTGTGELLDLVC 352
G G L+D V
Sbjct: 148 GKGVHVLIDHVM 159
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 90/195 (46%), Gaps = 38/195 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R+ +VGRPNVGKS L NR++G +R +V D PG TRD +Y + E+ L+DT G+
Sbjct: 181 RIGVVGRPNVGKSTLVNRMLGEDRVVVYDMPGTTRDSVYIPYLRHDKEYTLIDTAGIRR- 239
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K +E +I T+ AI+++ V+I ++D
Sbjct: 240 RKHVKEAVEKFSIVKTL--------------------------QAIQDANVVIVVIDSHE 273
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCES----PRKGIMQVSEFWSLGFSPLP----I 336
L D + ++ + +++A+NK + R+ I E LGF P I
Sbjct: 274 DLVEQDLHMIGYVLD--AGRGVVIAINKWDGLQKDEREHIKSEVE-RRLGFVPYAKVHYI 330
Query: 337 SAISGTGTGELLDLV 351
SA+ GT G+L D +
Sbjct: 331 SALHGTAVGDLYDTI 345
>gi|148543995|ref|YP_001271365.1| GTP-binding protein EngA [Lactobacillus reuteri DSM 20016]
gi|184153389|ref|YP_001841730.1| GTP-binding protein EngA [Lactobacillus reuteri JCM 1112]
gi|194467923|ref|ZP_03073909.1| small GTP-binding protein [Lactobacillus reuteri 100-23]
gi|423332743|ref|ZP_17310525.1| GTP-binding protein [Lactobacillus reuteri ATCC 53608]
gi|166920101|sp|A5VJK4.1|DER_LACRD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|229784134|sp|B2G718.1|DER_LACRJ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|148531029|gb|ABQ83028.1| small GTP-binding protein [Lactobacillus reuteri DSM 20016]
gi|183224733|dbj|BAG25250.1| GTP-binding protein [Lactobacillus reuteri JCM 1112]
gi|194452776|gb|EDX41674.1| small GTP-binding protein [Lactobacillus reuteri 100-23]
gi|337727861|emb|CCC02949.1| GTP-binding protein [Lactobacillus reuteri ATCC 53608]
Length = 437
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 109/193 (56%), Gaps = 34/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFNR+ G +IV D PGVTRDR+Y + W F ++DTGG
Sbjct: 4 PIVAVVGRPNVGKSTLFNRIAGERISIVEDTPGVTRDRIYAHAEWLGKHFSMIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I + PL T+ I +QA AI+E+ VIIF+ D +
Sbjct: 61 -----------------IEISDQPLLTQ----------IRQQAEIAIDEADVIIFVADVE 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE++A L ++ +K ++LAVNK ++P + + +++SLG P +S++ G
Sbjct: 94 NGVTDADEQVARILYRS--NKPVVLAVNKVDNPERR-SDIYDYYSLGLGEPYAVSSVHGI 150
Query: 343 GTGELLDLVCSEL 355
G G+LLD V E
Sbjct: 151 GMGDLLDAVIKEF 163
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 81/178 (45%), Gaps = 39/178 (21%)
Query: 167 AIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLNVS 225
+ +GRPNVGKS+L N ++G NR IV + G TRD + + + +F +VDT G+
Sbjct: 178 SFIGRPNVGKSSLVNAILGENRVIVSNVAGTTRDAINTQFETADGQKFTMVDTAGIRKKG 237
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
K N T ++ R + AI++S V++ +++ + G
Sbjct: 238 KIYEN-------------------TERYSLMR--------SMRAIDDSDVVLVVLNAEEG 270
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV---------SEFWSLGFSPL 334
+ D+ IA + + +I+ VNK ++ ++ + EF L ++P+
Sbjct: 271 IRELDKHIAGYAHEAGCG--VIIVVNKWDTLKEKDHRTMTDFTNLIRQEFQYLSYAPI 326
>gi|197302999|ref|ZP_03168047.1| hypothetical protein RUMLAC_01725 [Ruminococcus lactaris ATCC
29176]
gi|197297854|gb|EDY32406.1| ribosome biogenesis GTPase Der [Ruminococcus lactaris ATCC 29176]
Length = 442
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 110/193 (56%), Gaps = 32/193 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN L G +IV D PGVTRDR+Y W + EF L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTLFNVLAGEMISIVKDTPGVTRDRIYADVDWLDREFTLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P+ +R+ +++M QA AI+ + VIIF+ D +
Sbjct: 62 ----EPD-------------------SRDIILSQM----REQAQIAIDTADVIIFITDVK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL +D ++AD LR++ K ++L VNK ++ K + V EF++LG P+PISA S
Sbjct: 95 QGLVDSDSKVADMLRRS--GKPVVLVVNKVDNFDKYMADVYEFYNLGIGDPIPISAASRL 152
Query: 343 GTGELLDLVCSEL 355
G G++LD V +
Sbjct: 153 GLGDMLDAVIAHF 165
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 40/213 (18%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
PRVAIVG+PNVGKS++ NRL+G NR IV D G TRD + E++ +DT G+
Sbjct: 178 PRVAIVGKPNVGKSSIINRLLGENRVIVSDIAGTTRDAIDTEIVHNGKEYVFIDTAGL-- 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ + I E+L + I + +A+E + V++ ++D
Sbjct: 236 --RRKNKIKEELERYSII-----------------------RTVSAVERADVVLMVIDAT 270
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----LGFSP----L 334
G+T D +IA + K +I+ VNK ++ K + E+ + L + P +
Sbjct: 271 EGVTEQDAKIAGIAHER--GKGVIIVVNKWDAIEKNDKTMREYEAKIRQVLSYMPYAEIM 328
Query: 335 PISAISGTGTGELLDLV--CSELKKVEVCIGFL 365
+SA++G +L D++ E + + + G L
Sbjct: 329 YVSAMTGQRLPKLYDMIDMVIENQTLRIATGVL 361
>gi|77405817|ref|ZP_00782901.1| GTP-binding protein, Era/ThdF family [Streptococcus agalactiae
H36B]
gi|77414237|ref|ZP_00790399.1| GTP-binding protein, Era/ThdF family [Streptococcus agalactiae 515]
gi|339300980|ref|ZP_08650105.1| ribosome-associated GTPase EngA [Streptococcus agalactiae ATCC
13813]
gi|417006003|ref|ZP_11944573.1| GTP-binding protein EngA [Streptococcus agalactiae FSL S3-026]
gi|77159726|gb|EAO70875.1| GTP-binding protein, Era/ThdF family [Streptococcus agalactiae 515]
gi|77175604|gb|EAO78389.1| GTP-binding protein, Era/ThdF family [Streptococcus agalactiae
H36B]
gi|319745628|gb|EFV97929.1| ribosome-associated GTPase EngA [Streptococcus agalactiae ATCC
13813]
gi|341576184|gb|EGS26595.1| GTP-binding protein EngA [Streptococcus agalactiae FSL S3-026]
Length = 436
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/195 (39%), Positives = 107/195 (54%), Gaps = 34/195 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 2 VLPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTTGEWLNRKFSLIDTGGI 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+V A I+ QA A+ E+ VI+F+V
Sbjct: 62 DDVD------------------------------APFMEQIKHQADIAMTEADVIVFVVS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE ++ L K +K +ILAVNK ++P + +F+SLG P P+S++
Sbjct: 92 GKEGVTDADEYVSRILYKT--NKPVILAVNKVDNPEMR-NDIYDFYSLGLGDPYPLSSVH 148
Query: 341 GTGTGELLDLVCSEL 355
G GTG++LD + L
Sbjct: 149 GIGTGDILDAIVENL 163
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 81/179 (45%), Gaps = 38/179 (21%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
R +++GRPNVGKS+L N ++G +R I G TRD + + E+ ++DT G+
Sbjct: 176 RFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTNFVDSQGQEYTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R + AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------SMRAIDRSDVVLMVINAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSE--------FWSLGFSPL 334
G+ D+ IA + + K II+ VNK ++ K VS+ F L ++P+
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGIIIVVNKWDTIEKDNHTVSQWEADIRDNFQFLSYAPI 325
>gi|342214776|ref|ZP_08707449.1| ribosome-associated GTPase EngA [Veillonella sp. oral taxon 780
str. F0422]
gi|341590599|gb|EGS33836.1| ribosome-associated GTPase EngA [Veillonella sp. oral taxon 780
str. F0422]
Length = 444
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 109/193 (56%), Gaps = 31/193 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN +V +IV D PGVTRDR+Y + W + EF ++DTGG+
Sbjct: 4 PLVAVVGRPNVGKSTLFNAIVNKRISIVEDIPGVTRDRIYFDAEWLQREFTMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E I + E +P M+ QA AIEE+ VI+F+VDG+
Sbjct: 62 --------------------EFITAESHE-----IPKMMRFQAQLAIEEADVILFVVDGK 96
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADEE+A+ LR + K +IL VNK +S + + EF++LG P+ ISA +
Sbjct: 97 QGITIADEEVANLLRAS--GKPVILVVNKIDSVNQE-ANIYEFYNLGIGDPIGISAKNLM 153
Query: 343 GTGELLDLVCSEL 355
G+LLD V
Sbjct: 154 NLGDLLDDVVKHF 166
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 75/151 (49%), Gaps = 33/151 (21%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVLN 223
VA++GRPNVGKS+L N L+G R IV D G TRD + + W +F+L+DT G+
Sbjct: 181 VALIGRPNVGKSSLTNALLGQERVIVSDVAGTTRDSI--DTHWSHDGQDFVLIDTAGMRR 238
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
S+ +A V R + ++ AI+ S +++ ++D
Sbjct: 239 KSRI------------------------DAPVERYSIV---RSLRAIDRSDIVVLVLDAT 271
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
G+T D++I + ++ K +++ VNK +
Sbjct: 272 DGVTEQDKKIVGYAHES--GKGLVIVVNKWD 300
>gi|325265091|ref|ZP_08131818.1| ribosome-associated GTPase EngA [Clostridium sp. D5]
gi|324029781|gb|EGB91069.1| ribosome-associated GTPase EngA [Clostridium sp. D5]
Length = 442
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/195 (40%), Positives = 111/195 (56%), Gaps = 32/195 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN L G +IV D PGVTRDR+Y W + EF ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTLFNALAGEMISIVKDTPGVTRDRIYADVSWLDREFTMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P+ +R+ +++M QA AI+ + VIIF+ D +
Sbjct: 62 ----EPD-------------------SRDVILSQM----REQAQIAIDTADVIIFITDVK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL +D ++AD LR++ K +IL VNK ++ K + V EF++LG P+PISA S
Sbjct: 95 QGLVDSDSKVADMLRRS--GKPVILVVNKVDNFDKFMPDVYEFYNLGIGDPVPISAASRL 152
Query: 343 GTGELLDLVCSELKK 357
G G++LD V + K
Sbjct: 153 GLGDMLDEVTAHFPK 167
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 100/214 (46%), Gaps = 42/214 (19%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
PR+AIVG+PNVGKS++ N+L+G NR IV D G TRD + E++ +DT G+
Sbjct: 178 PRIAIVGKPNVGKSSIINKLLGENRVIVSDVAGTTRDAIDTEILHDGKEYIFIDTAGL-- 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ + I E+L + I + A+E + V++ ++D +
Sbjct: 236 --RRKSRIKEELERYSII-----------------------RTVTAVERADVVLIVIDAE 270
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKG----------IMQVSEFWSLGFSP 333
G+T D +IA + K II+ VNK ++ K I QV + S
Sbjct: 271 EGVTEQDAKIAGIAHER--GKGIIIVVNKWDAVEKNDKTMREYDNKIRQVLSYLSYA-EI 327
Query: 334 LPISAISGTGTGELLDL--VCSELKKVEVCIGFL 365
+ +SA++G +L ++ + E + + V G L
Sbjct: 328 MYVSAVTGQRLNKLYEMIDIVIENQTLRVATGVL 361
>gi|227364908|ref|ZP_03848953.1| GTP-binding protein EngA [Lactobacillus reuteri MM2-3]
gi|325682467|ref|ZP_08161984.1| ribosome-associated GTPase EngA [Lactobacillus reuteri MM4-1A]
gi|227070055|gb|EEI08433.1| GTP-binding protein EngA [Lactobacillus reuteri MM2-3]
gi|324978306|gb|EGC15256.1| ribosome-associated GTPase EngA [Lactobacillus reuteri MM4-1A]
Length = 440
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 109/193 (56%), Gaps = 34/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFNR+ G +IV D PGVTRDR+Y + W F ++DTGG
Sbjct: 7 PIVAVVGRPNVGKSTLFNRIAGERISIVEDTPGVTRDRIYAHAEWLGKHFSMIDTGG--- 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I + PL T+ I +QA AI+E+ VIIF+ D +
Sbjct: 64 -----------------IEISDQPLLTQ----------IRQQAEIAIDEADVIIFVADVE 96
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE++A L ++ +K ++LAVNK ++P + + +++SLG P +S++ G
Sbjct: 97 NGVTDADEQVARILYRS--NKPVVLAVNKVDNPERR-SDIYDYYSLGLGEPYAVSSVHGI 153
Query: 343 GTGELLDLVCSEL 355
G G+LLD V E
Sbjct: 154 GMGDLLDAVIKEF 166
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 81/178 (45%), Gaps = 39/178 (21%)
Query: 167 AIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLNVS 225
+ +GRPNVGKS+L N ++G NR IV + G TRD + + + +F +VDT G+
Sbjct: 181 SFIGRPNVGKSSLVNAILGENRVIVSNVAGTTRDAINTQFETADGQKFTMVDTAGIRKKG 240
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
K N T ++ R + AI++S V++ +++ + G
Sbjct: 241 KIYEN-------------------TERYSLMR--------SMRAIDDSDVVLVVLNAEEG 273
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV---------SEFWSLGFSPL 334
+ D+ IA + + +I+ VNK ++ ++ + EF L ++P+
Sbjct: 274 IRELDKHIAGYAHEAGCG--VIIVVNKWDTLKEKDHRTMTDFTNLIRQEFQYLSYAPI 329
>gi|299473466|emb|CBN77863.1| PEngA, plastid EngA GTPase [Ectocarpus siliculosus]
Length = 680
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/200 (38%), Positives = 113/200 (56%), Gaps = 32/200 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVG--GNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGG 220
P VA++GRPNVGKS + NRL + +IV DE GVTRDR Y R+++ +F +VDTGG
Sbjct: 219 FPVVAVIGRPNVGKSTVVNRLAKRFKDGSIVFDESGVTRDRTYKRAWYCGKDFDVVDTGG 278
Query: 221 VLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLV 280
+ + +D +G + +E I +QA A+EE+ +I +V
Sbjct: 279 L---------VFDD---------KGGDVFAKE---------IRQQALIALEEATAVIMVV 311
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAI 339
DG G D+EIA +LR+ + ++LAVNKCES + G +Q +EFW LG P PIS +
Sbjct: 312 DGIVGCNVLDQEIARFLRQQKVP--VVLAVNKCESQKYGEIQTAEFWCLGLGEPWPISGL 369
Query: 340 SGTGTGELLDLVCSELKKVE 359
G G +++D V L +V+
Sbjct: 370 HGDGIYDMMDNVAEHLYEVD 389
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 67/150 (44%), Gaps = 38/150 (25%)
Query: 157 NVPEHLLP-----------RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGR 205
NV EHL VAIVGRPNVGKS+L NRL G R+IV D PG TRD +
Sbjct: 380 NVAEHLYEVDENAEEEDNINVAIVGRPNVGKSSLLNRLFGETRSIVSDVPGTTRDSIDAM 439
Query: 206 SFWGEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQ 265
G + LVDT G+ K G E M+ R
Sbjct: 440 FERGGRTYRLVDTAGIRRKGK------------VDYGNEFF--------------MVNR- 472
Query: 266 ATAAIEESCVIIFLVDGQAGLTAADEEIAD 295
A AI + V++ +VD +AG+T D +AD
Sbjct: 473 AFKAIRRADVVLLMVDVEAGITDQDRVLAD 502
>gi|227547248|ref|ZP_03977297.1| small GTP-binding protein [Bifidobacterium longum subsp. longum
ATCC 55813]
gi|227212207|gb|EEI80103.1| small GTP-binding protein [Bifidobacterium longum subsp. infantis
ATCC 55813]
Length = 709
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 116/231 (50%), Gaps = 37/231 (16%)
Query: 136 DETDDRKDSGKKQKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEP 195
DE D+ SG+ + G P +L A+VGRPNVGKS+L NR++G A+V D P
Sbjct: 248 DEGDEDLISGRGFTEGARKAGPKPVGVL---AVVGRPNVGKSSLVNRILGRRAAVVEDTP 304
Query: 196 GVTRDRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAV 255
GVTRDR+ + W +F LVDTGG EA V
Sbjct: 305 GVTRDRVSYDAEWAGTDFKLVDTGGW------------------------------EADV 334
Query: 256 ARMPSMIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCES 315
+ S I QA A+ + ++F+VDGQ G+T DE I LR K ++LAVNK +
Sbjct: 335 EGIESAIASQAQVAVTLADAVVFVVDGQVGMTTTDERIVKMLRA--AGKPVVLAVNKIDD 392
Query: 316 PRKGIMQVSEFWSLGFS-PLPISAISGTGTGELLDLVCSELKKVEVCIGFL 365
+ +EFW LG P ISA+ G G G+LLD+ +LK+ E G+L
Sbjct: 393 QASEYL-AAEFWKLGLGEPYSISAMHGRGVGDLLDVALDKLKQAEKTSGYL 442
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 44/75 (58%)
Query: 147 KQKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRS 206
K K+ + T G + L RVA+VGRPNVGKS+L N+L RA+V D G TRD +
Sbjct: 431 KLKQAEKTSGYLTPSGLRRVALVGRPNVGKSSLLNQLAREERAVVNDLAGTTRDPVDEIV 490
Query: 207 FWGEHEFMLVDTGGV 221
+++ +DT G+
Sbjct: 491 NIDGEDWLFIDTAGI 505
>gi|297205894|ref|ZP_06923289.1| ribosome-associated GTPase EngA [Lactobacillus jensenii JV-V16]
gi|297149020|gb|EFH29318.1| ribosome-associated GTPase EngA [Lactobacillus jensenii JV-V16]
Length = 439
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 104/194 (53%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVG+PNVGKS LFNR++ AIV D PGVTRDR Y ++ W HEF ++DTGG
Sbjct: 6 LPTVAIVGQPNVGKSTLFNRIINERLAIVEDRPGVTRDRNYAKASWLGHEFNIIDTGG-- 63
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I EG R+ I QA A+EE+ VI+ +
Sbjct: 64 ------------------ITWEG----------GRIEDEIRAQADIAMEEADVIVMITSV 95
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
LT DE IA L ++ K +ILAVNK ++P + + +F+SLG P+PIS+ G
Sbjct: 96 ALHLTDLDERIARILYRS--SKPVILAVNKADNPEQR-ADIYDFYSLGLGDPIPISSTHG 152
Query: 342 TGTGELLDLVCSEL 355
TG G+LLD V
Sbjct: 153 TGIGDLLDAVVENF 166
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 92/196 (46%), Gaps = 41/196 (20%)
Query: 167 AIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEH--EFMLVDTGGVLNV 224
+++GRPNVGKS++ N ++G R IV +E G TRD + F E +F ++DT G+
Sbjct: 181 SVIGRPNVGKSSIINAMLGQKRVIVANEEGTTRDAV-DTPFVAEDGTKFRMIDTAGI--- 236
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E T + +V R A AAI+ S V+ ++D
Sbjct: 237 -RRRGKVYE---------------KTEKYSVLR--------AQAAIQRSDVVCLVLDAST 272
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPLP- 335
G+ D+ +A + + +I+ VNK + P+K EF L ++P+
Sbjct: 273 GIREQDKHVAGFAHD--AGRGMIIVVNKWDLPKKDSNSAKDFTRVIREEFQYLDYAPIIF 330
Query: 336 ISAISGTGTGELLDLV 351
+SA +G +L DL+
Sbjct: 331 VSAKTGKNLDQLPDLI 346
>gi|169348409|ref|ZP_02866347.1| hypothetical protein CLOSPI_00124 [Clostridium spiroforme DSM 1552]
gi|169293878|gb|EDS76011.1| ribosome biogenesis GTPase Der [Clostridium spiroforme DSM 1552]
Length = 434
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/191 (42%), Positives = 108/191 (56%), Gaps = 34/191 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGR NVGKS +FNR+VG +IV D GVTRDR+Y + W EF L+DTGG+
Sbjct: 5 VAIVGRANVGKSTIFNRIVGERISIVEDIAGVTRDRIYATASWLTKEFRLIDTGGIE--- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
++D + TT I M QA AIEE+ +IIF+V+G+ G
Sbjct: 62 ------LKDASFTTQIKM---------------------QAEIAIEEADLIIFVVNGREG 94
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+T DE +A L+KN K I+LAVNK + I + +F+SLG P+P+S G G
Sbjct: 95 VTQEDEYVARLLQKN--KKPILLAVNKIDDG-AFINDIYDFYSLGIGDPIPVSGSHGIGI 151
Query: 345 GELLDLVCSEL 355
G+LLD V +L
Sbjct: 152 GDLLDEVIKKL 162
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 74/154 (48%), Gaps = 29/154 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R +I+GRPNVGKS+L N ++G R IV + G TRD + ++ ++DT G+
Sbjct: 175 RFSIIGRPNVGKSSLTNSILGEERVIVSNIEGTTRDAIDTVFEKDGQKYRVIDTAGMRKK 234
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K N+ + +V R A ++IE+S VI+ ++DG+
Sbjct: 235 GKIYENV-------------------EKYSVLR--------ALSSIEKSDVIVVVIDGER 267
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+ D+ +A + + K +IL VNK + K
Sbjct: 268 GVIEQDKHVAGYAHE--AGKGVILVVNKWDLVEK 299
>gi|323343319|ref|ZP_08083546.1| ribosome-associated GTPase EngA [Prevotella oralis ATCC 33269]
gi|323095138|gb|EFZ37712.1| ribosome-associated GTPase EngA [Prevotella oralis ATCC 33269]
Length = 458
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 107/193 (55%), Gaps = 35/193 (18%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGG-VLNV 224
VAIVGRPNVGKS LFNRL +AIV D G TRDR YG+ W EF +VDTGG V+N
Sbjct: 26 VAIVGRPNVGKSTLFNRLTQSRKAIVSDTAGTTRDRQYGKCNWNGREFSVVDTGGWVVN- 84
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+I ED I RQ A EE+ ++IFLVD
Sbjct: 85 ---SDDIFED--------------------------AIRRQVLVATEEADIVIFLVDTMT 115
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTG 343
G+T DE++A LR++ + ++L NK ++ Q ++F+ LG P+ +SA +G G
Sbjct: 116 GVTDWDEDVAQILRRSKLP--VLLVANKVDNS-SDYYQAADFYRLGLGDPVCVSAATGGG 172
Query: 344 TGELLDLVCSELK 356
TG+LLDL+ ++LK
Sbjct: 173 TGDLLDLLITKLK 185
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 81/165 (49%), Gaps = 29/165 (17%)
Query: 150 KRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWG 209
K KT + + +PR A+VGRPNVGKS++ N +G +R IV + G TRD +Y R
Sbjct: 183 KLKTDDFDDVQDDIPRFAVVGRPNVGKSSIINAFIGEDRNIVTEIAGTTRDSIYTRFDKF 242
Query: 210 EHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAA 269
+F LVDT G+ + + + EDL + + ++ +
Sbjct: 243 GFDFYLVDTAGI----RRKNKVTEDLEFYSVM-----------------------RSIRS 275
Query: 270 IEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
IE S V I ++D G+ A D I ++KN +K +++ VNK +
Sbjct: 276 IENSDVCILMIDATRGIEAQDMNIFQLIQKN--NKSLVVVVNKWD 318
>gi|256851011|ref|ZP_05556400.1| ribosome-associated GTPase EngA [Lactobacillus jensenii 27-2-CHN]
gi|260661223|ref|ZP_05862137.1| ribosome-associated GTPase EngA [Lactobacillus jensenii 115-3-CHN]
gi|256616073|gb|EEU21261.1| ribosome-associated GTPase EngA [Lactobacillus jensenii 27-2-CHN]
gi|260548160|gb|EEX24136.1| ribosome-associated GTPase EngA [Lactobacillus jensenii 115-3-CHN]
Length = 436
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 104/194 (53%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVG+PNVGKS LFNR++ AIV D PGVTRDR Y ++ W HEF ++DTGG
Sbjct: 3 LPTVAIVGQPNVGKSTLFNRIINERLAIVEDRPGVTRDRNYAKASWLGHEFNIIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I EG R+ I QA A+EE+ VI+ +
Sbjct: 61 ------------------ITWEG----------GRIEDEIRAQADIAMEEADVIVMITSV 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
LT DE IA L ++ K +ILAVNK ++P + + +F+SLG P+PIS+ G
Sbjct: 93 ALHLTDLDERIARILYRS--SKPVILAVNKADNPEQR-ADIYDFYSLGLGDPIPISSTHG 149
Query: 342 TGTGELLDLVCSEL 355
TG G+LLD V
Sbjct: 150 TGIGDLLDAVVENF 163
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 92/196 (46%), Gaps = 41/196 (20%)
Query: 167 AIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEH--EFMLVDTGGVLNV 224
+++GRPNVGKS++ N ++G R IV +E G TRD + F E +F ++DT G+
Sbjct: 178 SVIGRPNVGKSSIINAMLGQKRVIVANEEGTTRDAV-DTPFVAEDGTKFRMIDTAGI--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E T + +V R A AAI+ S V+ ++D
Sbjct: 234 -RRRGKVYE---------------KTEKYSVLR--------AQAAIQRSDVVCLVLDAST 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPLP- 335
G+ D+ +A + + +I+ VNK + P+K EF L ++P+
Sbjct: 270 GIREQDKHVAGFAHD--AGRGMIIVVNKWDLPKKDSNSAKDFTRVIREEFQYLDYAPIIF 327
Query: 336 ISAISGTGTGELLDLV 351
+SA +G +L DL+
Sbjct: 328 VSAKTGKNLDQLPDLI 343
>gi|154498134|ref|ZP_02036512.1| hypothetical protein BACCAP_02115 [Bacteroides capillosus ATCC
29799]
gi|150273124|gb|EDN00281.1| ribosome biogenesis GTPase Der [Pseudoflavonifractor capillosus
ATCC 29799]
Length = 441
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 107/189 (56%), Gaps = 32/189 (16%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+ P VAIVGRPNVGKS LFNRLVG +IV D PGVTRDR+Y W +F +VDTGG+
Sbjct: 1 MKPLVAIVGRPNVGKSMLFNRLVGQRLSIVEDTPGVTRDRIYAECEWRNRKFDIVDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+PN ++ S + QA AI + V +F+ D
Sbjct: 61 ------EPNTDSEIL-----------------------SFMREQAEIAIRNADVTVFVCD 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
++GLTA+D+E+A+ L ++ K ++LAVNK + + EF++LG P+ +SA+
Sbjct: 92 IKSGLTASDQEVANMLLRS--GKPVVLAVNKMDQVGMTNPDIFEFYNLGLGDPIAVSAVH 149
Query: 341 GTGTGELLD 349
G GTG+LLD
Sbjct: 150 GHGTGDLLD 158
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 90/196 (45%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VA++G+PNVGKS+L NR++G R IV + G TRD + + +++L+DT G+
Sbjct: 178 KVAVIGKPNVGKSSLINRILGEERVIVSNMAGTTRDAIDSYYENDKGKYILIDTAGMRKK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK I E ++ +AT AIE V + +VD Q
Sbjct: 238 SKVDDRI-EKFSVL--------------------------RATMAIERCDVCLIMVDAQE 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS--------LGFSP-LP 335
G+T D ++A + K I+ VNK ++ K + + + ++P L
Sbjct: 271 GVTEQDTKVAGLAHE--AGKACIIVVNKWDAIEKDDKTMDKMRQDVRRDLSYMTYAPILF 328
Query: 336 ISAISGTGTGELLDLV 351
ISA +G L +L+
Sbjct: 329 ISAKTGQRVERLFELI 344
>gi|292492503|ref|YP_003527942.1| small GTP-binding protein [Nitrosococcus halophilus Nc4]
gi|291581098|gb|ADE15555.1| small GTP-binding protein [Nitrosococcus halophilus Nc4]
Length = 464
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 102/185 (55%), Gaps = 34/185 (18%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VA+VGRPNVGKS LFNRL A+V D+PGVTRDR YG + +GE F++VDTGG+
Sbjct: 5 VALVGRPNVGKSTLFNRLTRSRDALVADQPGVTRDRKYGIARYGEQSFLVVDTGGI---- 60
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+E+ V ++ QA AIEE+ +I+FLVDG+ G
Sbjct: 61 -----------------------TEQESGVG---ELMRVQAQLAIEEADIILFLVDGREG 94
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
L+A DE IA+ LR+ K + L +NK E R + SEF+ LG P ISA G G
Sbjct: 95 LSALDETIAEQLRR--AQKPLKLVINKTEG-RDQELVASEFYRLGLGEPATISAQQGQGV 151
Query: 345 GELLD 349
G LL
Sbjct: 152 GGLLQ 156
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 90/193 (46%), Gaps = 44/193 (22%)
Query: 167 AIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSK 226
A+VGRPNVGKS L NRL+G R + + PG TRD + ++ LVDT G+ SK
Sbjct: 180 AVVGRPNVGKSTLVNRLLGEERVLSFEAPGTTRDSIAIPFCHQGQDYTLVDTAGIRRRSK 239
Query: 227 SQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGL 286
+++E +I T+ AIE + V+I ++D + G+
Sbjct: 240 IL-DMLEKFSIAKTL--------------------------EAIEAAQVVILVIDAREGV 272
Query: 287 TAADEEIADWLRKNYMDKFIILAVNKCES----PRKGI-------MQVSEFWSLGFSPLP 335
D +A + ++ K +++AVNK + R+ + + +F + F
Sbjct: 273 VEQDLHLAGLILES--GKAVVIAVNKWDGLSSDQRRKVKADLDRRLPFLDFARVHF---- 326
Query: 336 ISAISGTGTGELL 348
ISA+ G+G GEL
Sbjct: 327 ISALHGSGVGELF 339
>gi|329116373|ref|ZP_08245090.1| ribosome biogenesis GTPase Der [Streptococcus parauberis NCFD 2020]
gi|333905625|ref|YP_004479496.1| GTP-binding protein EngA [Streptococcus parauberis KCTC 11537]
gi|326906778|gb|EGE53692.1| ribosome biogenesis GTPase Der [Streptococcus parauberis NCFD 2020]
gi|333120890|gb|AEF25824.1| GTP-binding protein EngA [Streptococcus parauberis KCTC 11537]
gi|456370315|gb|EMF49211.1| GTP-binding protein [Streptococcus parauberis KRS-02109]
gi|457096112|gb|EMG26583.1| GTP-binding protein [Streptococcus parauberis KRS-02083]
Length = 436
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 108/195 (55%), Gaps = 34/195 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 2 VLPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTTGEWLNRKFSLIDTGGI 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+V A I+ QA A++E+ VI+F+V
Sbjct: 62 DDVD------------------------------APFMEQIKHQAQIAMDEADVIVFVVS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE ++ L + +K +ILAVNK ++P + +F++LG P P+S++
Sbjct: 92 GKEGVTDADEYVSKILYRT--NKPVILAVNKVDNPEMR-NDIYDFYALGLGDPYPVSSVH 148
Query: 341 GTGTGELLDLVCSEL 355
G GTG++LD + L
Sbjct: 149 GIGTGDVLDAIVENL 163
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 93/198 (46%), Gaps = 41/198 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
R +++GRPNVGKS+L N ++G +R I G TRD + SF E EF ++DT G+
Sbjct: 176 RFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAI-DTSFKDEDGQEFTMIDTAGMR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A AI+ S V++ +++
Sbjct: 235 KSGKVYEN-------------------TEKYSVMR--------AMRAIDRSDVVLMVINA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPL 334
+ G+ D+ IA + + K +I+ VNK ++ K VS +F L ++P+
Sbjct: 268 EEGIREYDKRIAGFAHE--AGKGMIIVVNKWDTLEKDNHTVSKWEADIRDQFQFLSYAPI 325
Query: 335 P-ISAISGTGTGELLDLV 351
+SA +G +L +++
Sbjct: 326 IFVSAETGQRLNKLPEMI 343
>gi|171742925|ref|ZP_02918732.1| hypothetical protein BIFDEN_02042 [Bifidobacterium dentium ATCC
27678]
gi|283456054|ref|YP_003360618.1| bifunctional cytidylate kinase/GTP-binding protein [Bifidobacterium
dentium Bd1]
gi|171278539|gb|EDT46200.1| ribosome biogenesis GTPase Der [Bifidobacterium dentium ATCC 27678]
gi|283102688|gb|ADB09794.1| Bifunctional cytidylate kinase/GTP-binding protein [Bifidobacterium
dentium Bd1]
Length = 709
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/201 (39%), Positives = 105/201 (52%), Gaps = 34/201 (16%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+A+VGRPNVGKS L NR++G A+V D PGVTRDR+ + W +F LVDTGG
Sbjct: 275 LAVVGRPNVGKSTLVNRILGRRAAVVEDTPGVTRDRVSYDAEWAGTDFKLVDTGGW---- 330
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
EA V + S I QA A++ + ++ +VDGQ G
Sbjct: 331 --------------------------EADVEGIESAIASQAQMAVQLADAVVLVVDGQVG 364
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
LT+ DE I LR + K + LAVNK + R+ +EFW +G P ISA+ G G
Sbjct: 365 LTSTDERIVKMLRAS--GKPVTLAVNKVDD-RESEYLTAEFWKMGMGEPYGISAMHGRGI 421
Query: 345 GELLDLVCSELKKVEVCIGFL 365
GELLD+ LKK + GFL
Sbjct: 422 GELLDVALESLKKAKKTSGFL 442
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 43/73 (58%)
Query: 149 KKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFW 208
KK K T G + L RVA+VGRPNVGKS+L N+L R++V D G TRD +
Sbjct: 433 KKAKKTSGFLTPSHLRRVALVGRPNVGKSSLLNQLAHEERSVVNDLAGTTRDPVDEVVTV 492
Query: 209 GEHEFMLVDTGGV 221
+++ +DT G+
Sbjct: 493 DGEDWLFIDTAGI 505
>gi|163782118|ref|ZP_02177117.1| GTP binding protein Era [Hydrogenivirga sp. 128-5-R1-1]
gi|159882650|gb|EDP76155.1| GTP binding protein Era [Hydrogenivirga sp. 128-5-R1-1]
Length = 431
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/193 (44%), Positives = 113/193 (58%), Gaps = 33/193 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
RV I+GRPNVGKS+LFNR+VG +AIV D PGVTRD + ++ WG EF+LVDTGG+ V
Sbjct: 4 RVVIIGRPNVGKSSLFNRIVGRRKAIVEDIPGVTRDSVESKAEWGGKEFLLVDTGGL--V 61
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
S I+E + T IER+ +E S VI+F+V +
Sbjct: 62 PDSHDEILEGVRKT-----------------------IERE----VERSDVILFVVSVKD 94
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGTG 343
G+T DEEIA L + DK +IL VNK ++ R + VSEF+ LGF + P+S++ G G
Sbjct: 95 GVTPLDEEIARLLYP-FGDK-VILVVNKVDTDRDEEV-VSEFYQLGFRHVFPVSSVHGRG 151
Query: 344 TGELLDLVCSELK 356
GELLD V L+
Sbjct: 152 VGELLDEVVKRLR 164
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 71/150 (47%), Gaps = 29/150 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R+ + GRPNVGKS+L N L+ +R IV G TRD + W ++F+LVDT GV
Sbjct: 176 RLTLAGRPNVGKSSLLNALLKEDRVIVSPVAGTTRDTVEVPFEWNGNKFVLVDTAGV--- 232
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+P+ +E G+E + ++ AIE S V+ ++D
Sbjct: 233 --RRPSNVE-------YGVEFFSVG---------------RSLKAIESSDVVCLVLDAGE 268
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCE 314
G+T D+ + + + Y K ++ NK +
Sbjct: 269 GVTRQDKRLGGLIERKY--KGCVVVANKMD 296
>gi|343494444|ref|ZP_08732706.1| GTP-binding protein Der [Vibrio nigripulchritudo ATCC 27043]
gi|342825349|gb|EGU59848.1| GTP-binding protein Der [Vibrio nigripulchritudo ATCC 27043]
Length = 495
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 107/192 (55%), Gaps = 40/192 (20%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YG++ GEHEF+++DTGG+
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAQLGEHEFIVIDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
T E +M Q+ AAI+E+ V++F+VD
Sbjct: 61 --------------------------DGTEEGVETKMAE----QSLAAIDEADVVLFMVD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSPL-PIS 337
G+AGLT ADE IA LRK ++K +L VNK + GI ++FW LG + I+
Sbjct: 91 GRAGLTPADEAIAQHLRK--IEKPAMLVVNKVD----GIDADSACADFWKLGVDDMYQIA 144
Query: 338 AISGTGTGELLD 349
A G G L+D
Sbjct: 145 AAHGRGVAALID 156
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 101/220 (45%), Gaps = 40/220 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS L NR++G R +V D PG TRD +Y E E++L+DT GV
Sbjct: 208 KLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDEREYVLIDTAGVRRR 267
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
++ + E ++ T+ A+E++ V++ ++D +
Sbjct: 268 TRINETV-EKFSVVKTL--------------------------KAVEDANVVLLVIDARE 300
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIM-QVSEFWS--LGFSPLP----IS 337
++ D + + + I++AVNK + + QV + LGF IS
Sbjct: 301 NISDQDLSLLGFALN--AGRSIVIAVNKWDGLDTDVKEQVKKELDRRLGFVDFARIHFIS 358
Query: 338 AISGTGTGELLDLVCSELKKVEVCIGFLLICNAITKIFHI 377
A+ GTG G L + V K +G + +T+I +
Sbjct: 359 ALHGTGVGHLFESVQEAYKSATTRVG----TSVLTRIMKM 394
>gi|296454185|ref|YP_003661328.1| small GTP-binding protein [Bifidobacterium longum subsp. longum
JDM301]
gi|296183616|gb|ADH00498.1| small GTP-binding protein [Bifidobacterium longum subsp. longum
JDM301]
Length = 709
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 116/231 (50%), Gaps = 37/231 (16%)
Query: 136 DETDDRKDSGKKQKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEP 195
DE D+ SG+ + G P +L A+VGRPNVGKS+L NR++G A+V D P
Sbjct: 248 DEGDEDLISGRGFTEGARKAGPKPVGVL---AVVGRPNVGKSSLVNRILGRRAAVVEDTP 304
Query: 196 GVTRDRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAV 255
GVTRDR+ + W +F LVDTGG EA V
Sbjct: 305 GVTRDRVSYDAEWAGTDFKLVDTGGW------------------------------EADV 334
Query: 256 ARMPSMIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCES 315
+ S I QA A+ + ++F+VDGQ G+T DE I LR K ++LAVNK +
Sbjct: 335 EGIESAIASQAQIAVTLADAVVFVVDGQVGMTTTDERIVKMLRA--AGKPVVLAVNKIDD 392
Query: 316 PRKGIMQVSEFWSLGFS-PLPISAISGTGTGELLDLVCSELKKVEVCIGFL 365
+ +EFW LG P ISA+ G G G+LLD+ +LK+ E G+L
Sbjct: 393 QASEYL-AAEFWKLGLGEPYSISAMHGRGVGDLLDVALDKLKQAEKTSGYL 442
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 44/75 (58%)
Query: 147 KQKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRS 206
K K+ + T G + L RVA+VGRPNVGKS+L N+L RA+V D G TRD +
Sbjct: 431 KLKQAEKTSGYLTPSGLRRVALVGRPNVGKSSLLNQLAREERAVVNDLAGTTRDPVDEIV 490
Query: 207 FWGEHEFMLVDTGGV 221
+++ +DT G+
Sbjct: 491 NIDGEDWLFIDTAGI 505
>gi|449930232|ref|ZP_21801963.1| GTP-binding protein EngA [Streptococcus mutans 3SN1]
gi|449163708|gb|EMB66801.1| GTP-binding protein EngA [Streptococcus mutans 3SN1]
Length = 436
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 107/194 (55%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKSALFNR+ G +IV D GVTRDR+Y ++ W +F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSALFNRIAGERISIVEDVEGVTRDRIYTKAEWLNRQFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L + + K +ILAVNK ++P + +F++LG P P+S+ G
Sbjct: 93 KEGITDADEYVAKILYRTH--KPVILAVNKVDNPEMH-SAIYDFYALGLGDPYPVSSAHG 149
Query: 342 TGTGELLDLVCSEL 355
GTG++LD + L
Sbjct: 150 IGTGDVLDAIVDNL 163
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 94/198 (47%), Gaps = 41/198 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
+ +++GRPNVGKS+L N ++G +R I G TRD + +F E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAI-DTTFTDEEGQEFTMIDTAGMR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A AI+ S +++ +++
Sbjct: 235 KSGKVYEN-------------------TEKYSVMR--------AMRAIDRSDIVLMVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSE--------FWSLGFSPL 334
+ G+ D+ IA + + K I++ VNK ++ +K V++ F + ++P+
Sbjct: 268 EEGIREYDKRIAGFAHE--AGKGIVVVVNKWDAIKKDNRTVAQWEADIRDNFQYIPYAPI 325
Query: 335 P-ISAISGTGTGELLDLV 351
+SA++ +L D++
Sbjct: 326 VFVSAVTKQRLHKLPDVI 343
>gi|160880522|ref|YP_001559490.1| GTP-binding protein EngA [Clostridium phytofermentans ISDg]
gi|189037143|sp|A9KLK7.1|DER_CLOPH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|160429188|gb|ABX42751.1| small GTP-binding protein [Clostridium phytofermentans ISDg]
Length = 441
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 104/191 (54%), Gaps = 32/191 (16%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VA+VGRPNVGKS LFN L G +IV D PGVTRDR+Y W + +F LVDTGG+ S
Sbjct: 6 VAVVGRPNVGKSTLFNALAGDRISIVKDTPGVTRDRIYADITWLDKQFTLVDTGGIEPES 65
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
K M + + QA AI + VI+F+VD + G
Sbjct: 66 KDM-----------------------------MLTYMREQAEIAIATADVIMFVVDVRQG 96
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
L AD ++AD LR++ K +IL VNK ++ K + V EF++LG P+P+SA S G
Sbjct: 97 LLDADNKVADMLRRS--GKPVILVVNKVDNFDKFMPDVYEFYNLGIGDPVPVSAASMLGF 154
Query: 345 GELLDLVCSEL 355
G+LLDLV
Sbjct: 155 GDLLDLVVGHF 165
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 96/195 (49%), Gaps = 38/195 (19%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
PR+AIVG+PNVGKS++ N+L+G NR IV D G TRD + W + +++ +DT G+
Sbjct: 178 PRIAIVGKPNVGKSSIINKLLGENRVIVSDVAGTTRDAIDTAVTWNKKDYVFIDTAGLRR 237
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
SK + +E +I T+ +A+E + V++ ++D
Sbjct: 238 KSKIKEE-LERFSIIRTV--------------------------SAVERADVVVVVIDAN 270
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----LGFSP----L 334
G+T D +IA + K II+AVNK ++ K + ++ + L F P +
Sbjct: 271 EGVTEQDAKIAGIAHER--GKGIIIAVNKWDAIEKDDKTIYKYTNRIREILSFLPYAEIM 328
Query: 335 PISAISGTGTGELLD 349
+SA +G +L D
Sbjct: 329 FLSAKTGQRVTKLFD 343
>gi|330446667|ref|ZP_08310319.1| small GTP-binding domain protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328490858|dbj|GAA04816.1| small GTP-binding domain protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 500
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/192 (42%), Positives = 105/192 (54%), Gaps = 40/192 (20%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YGR+ EHEF+++DTGG+
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAELEEHEFIVIDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+G T E +M Q+ AAIEE+ V++FLVD
Sbjct: 61 ----------------------DG----TEEGVETKMAE----QSLAAIEEADVVLFLVD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSPL-PIS 337
G+AGLTAADE IA LR DK L VNK + GI +EFW LG + I+
Sbjct: 91 GRAGLTAADEAIAKHLRSR--DKPTFLVVNKVD----GIDADSACAEFWRLGVDAMYQIA 144
Query: 338 AISGTGTGELLD 349
A G L++
Sbjct: 145 ATQNRGVTALME 156
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 36/195 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS L NR++G R +V D PG TRD +Y E++L+DT G+
Sbjct: 213 KLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGQEYVLIDTAGIRR- 271
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K+ +E ++ T+ A+E++ V++ ++D +
Sbjct: 272 RKNMHQAVEKFSVIQTL--------------------------KAVEDANVVLLVIDARE 305
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQ--VSEF-WSLGFSPLP----IS 337
++ D + + + +++AVNK + + + SE LGF IS
Sbjct: 306 NISDQDLSLLGFALN--AGRSLVIAVNKWDGLDNEVKERVKSELDRRLGFVDFARIHFIS 363
Query: 338 AISGTGTGELLDLVC 352
A+ GTG G L + V
Sbjct: 364 ALHGTGVGHLYESVI 378
>gi|266624277|ref|ZP_06117212.1| GTP-binding protein EngA, partial [Clostridium hathewayi DSM 13479]
gi|288863885|gb|EFC96183.1| GTP-binding protein EngA [Clostridium hathewayi DSM 13479]
Length = 189
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/189 (43%), Positives = 106/189 (56%), Gaps = 32/189 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN L G +IV D PGVTRDR+Y W + F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTLFNVLAGDTISIVKDTPGVTRDRIYADCTWLDKNFTLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P+ D+ + S + QA AI + VI+F+VD +
Sbjct: 62 ----EPD-SSDIIL----------------------SQMREQAEIAIATADVIVFIVDVR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL AD ++AD LRK+ K ++LAVNK +S K V EF++LG P+P+SA S
Sbjct: 95 QGLVDADSKVADMLRKS--KKPVVLAVNKVDSFEKFGNDVYEFYNLGIGDPVPVSAASRL 152
Query: 343 GTGELLDLV 351
G GELLD V
Sbjct: 153 GLGELLDEV 161
>gi|313896288|ref|ZP_07829841.1| ribosome biogenesis GTPase Der [Selenomonas sp. oral taxon 137 str.
F0430]
gi|312975087|gb|EFR40549.1| ribosome biogenesis GTPase Der [Selenomonas sp. oral taxon 137 str.
F0430]
Length = 441
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/191 (41%), Positives = 110/191 (57%), Gaps = 33/191 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN++ +IV D PGVTRDR+Y + W HEF ++DTGG
Sbjct: 4 PIVAVVGRPNVGKSTLFNQIGKKRISIVDDMPGVTRDRIYMDAEWLNHEFTIIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I + + M S QA A+EE+ VI+FLVDG+
Sbjct: 61 ----------------------IEFDESDHILRSMRS----QAELAMEEADVILFLVDGR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
AGLTA+DEE+ LR+ +K +ILAVNK +S + + + +F++LG P+PISA +
Sbjct: 95 AGLTASDEEVGRLLRRT--NKPVILAVNKIDSFERENL-IYDFYALGLGDPIPISASNAM 151
Query: 343 GTGELLDLVCS 353
G+LLD V +
Sbjct: 152 NLGDLLDAVVA 162
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 92/196 (46%), Gaps = 39/196 (19%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+A+VGRPNVGKS+L NRL+G R IV D PG TRD + +++L+DT G+
Sbjct: 179 IAVVGRPNVGKSSLVNRLLGEERVIVSDVPGTTRDAIDTHFTRDGAKYLLIDTAGMRRKG 238
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
K I L +V R + AI+ + V++ +++ G
Sbjct: 239 K-------------------ITLPVERYSVMR--------SLRAIDRAGVVLMVINAAEG 271
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKC----ESPRKGIMQVS-----EFWSLGFSP-LP 335
+ D +IA ++ ++ K +I+ VNK E K ++ + E L ++P L
Sbjct: 272 ILEQDTKIAGYVHES--GKGVIIVVNKWDIFPEKNDKSTLRFTDDLREELGFLQYAPVLY 329
Query: 336 ISAISGTGTGELLDLV 351
SA++G + +LV
Sbjct: 330 TSALTGQRVERVTELV 345
>gi|325280073|ref|YP_004252615.1| GTP-binding protein engA [Odoribacter splanchnicus DSM 20712]
gi|324311882|gb|ADY32435.1| GTP-binding protein engA [Odoribacter splanchnicus DSM 20712]
Length = 435
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 110/194 (56%), Gaps = 34/194 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRLVG +AIV +E GVTRDR YG+S W +F ++DTGG ++ S
Sbjct: 5 VAIVGRPNVGKSTLFNRLVGTRKAIVNEESGVTRDRNYGKSSWNGKDFSVIDTGGYVSNS 64
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+I E+ I +Q A++E+ VI+F+VD + G
Sbjct: 65 ---DDIFEE--------------------------EINKQVILALDEADVILFMVDAEIG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP--LPISAISGTG 343
+T D+ A LR +DK + L NK ++ + + + +F+ LG IS++SG+G
Sbjct: 96 VTDLDQNFARLLRN--IDKPVYLVANKVDNHER-LYEAQDFYRLGIKGDLFCISSVSGSG 152
Query: 344 TGELLDLVCSELKK 357
TG+LLD V S ++
Sbjct: 153 TGDLLDQVVSHFQE 166
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 75/152 (49%), Gaps = 29/152 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LPR+ IVGRPNVGKS+ N L+G R IV D G TRD + R ++F+LVDT G+
Sbjct: 175 LPRITIVGRPNVGKSSTINALIGEERNIVTDIAGTTRDTLNTRYNRFGYDFLLVDTAGL- 233
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + + ED+ + + ++ AIEES V I L+D
Sbjct: 234 ---RKKAKVSEDVEFYSVM-----------------------RSIRAIEESDVCILLIDA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
G+ A D I + +N K +++ VNK +
Sbjct: 268 TRGMEAQDLNIFHLIERN--RKGVVIVVNKWD 297
>gi|306822736|ref|ZP_07456114.1| ribosome-associated GTPase EngA [Bifidobacterium dentium ATCC
27679]
gi|309800900|ref|ZP_07695032.1| ribosome biogenesis GTPase Der [Bifidobacterium dentium JCVIHMP022]
gi|304554281|gb|EFM42190.1| ribosome-associated GTPase EngA [Bifidobacterium dentium ATCC
27679]
gi|308222436|gb|EFO78716.1| ribosome biogenesis GTPase Der [Bifidobacterium dentium JCVIHMP022]
Length = 709
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/201 (39%), Positives = 105/201 (52%), Gaps = 34/201 (16%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+A+VGRPNVGKS L NR++G A+V D PGVTRDR+ + W +F LVDTGG
Sbjct: 275 LAVVGRPNVGKSTLVNRILGRRAAVVEDTPGVTRDRVSYDAEWAGTDFKLVDTGGW---- 330
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
EA V + S I QA A++ + ++ +VDGQ G
Sbjct: 331 --------------------------EADVEGIESAIASQAQMAVQLADAVVLVVDGQVG 364
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
LT+ DE I LR + K + LAVNK + R+ +EFW +G P ISA+ G G
Sbjct: 365 LTSTDERIVKMLRAS--GKPVTLAVNKVDD-RESEYLTAEFWKMGLGEPYGISAMHGRGI 421
Query: 345 GELLDLVCSELKKVEVCIGFL 365
GELLD+ LKK + GFL
Sbjct: 422 GELLDVALESLKKAKKTSGFL 442
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 43/73 (58%)
Query: 149 KKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFW 208
KK K T G + L RVA+VGRPNVGKS+L N+L R++V D G TRD +
Sbjct: 433 KKAKKTSGFLTPSHLRRVALVGRPNVGKSSLLNQLAHEERSVVNDLAGTTRDPVDEVVTV 492
Query: 209 GEHEFMLVDTGGV 221
+++ +DT G+
Sbjct: 493 DGEDWLFIDTAGI 505
>gi|386866982|ref|YP_006279976.1| bifunctional cytidylate kinase/GTP-binding protein [Bifidobacterium
animalis subsp. animalis ATCC 25527]
gi|385701065|gb|AFI63013.1| bifunctional cytidylate kinase/GTP-binding protein [Bifidobacterium
animalis subsp. animalis ATCC 25527]
Length = 710
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/201 (39%), Positives = 104/201 (51%), Gaps = 34/201 (16%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+A+VGRPNVGKS L NR++G A+V D PGVTRDR+ + W +F LVDTGG
Sbjct: 276 IAVVGRPNVGKSTLVNRILGRRAAVVEDTPGVTRDRVSYDAEWAGTDFKLVDTGGW---- 331
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
EA V + S I QA A+E + +IF+VD G
Sbjct: 332 --------------------------EADVEGIDSAIASQAQIAVELADSVIFVVDALTG 365
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
LT DE I LR++ K + +AVNK + M +EFW LG P PISA+ G G
Sbjct: 366 LTQTDERIVKLLRQD--GKPVTVAVNKIDDQISEYM-AAEFWKLGLGEPYPISAMHGRGV 422
Query: 345 GELLDLVCSELKKVEVCIGFL 365
G+LLD +++K E GFL
Sbjct: 423 GDLLDEAVAQMKSAEKTSGFL 443
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 152 KTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEH 211
KT+ P HL RVA+VGRPNVGKS+L N+L R++V + G TRD +
Sbjct: 438 KTSGFLTPSHL-RRVALVGRPNVGKSSLLNQLSHSERSVVNELAGTTRDPVDEIVTIDGE 496
Query: 212 EFMLVDTGGV 221
+++ +DT G+
Sbjct: 497 DYLFIDTAGI 506
>gi|397650457|ref|YP_006490984.1| GTP-binding protein Der [Streptococcus mutans GS-5]
gi|449995016|ref|ZP_21822870.1| GTP-binding protein EngA [Streptococcus mutans A9]
gi|392604026|gb|AFM82190.1| GTP-binding protein Der [Streptococcus mutans GS-5]
gi|449184791|gb|EMB86710.1| GTP-binding protein EngA [Streptococcus mutans A9]
Length = 436
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 108/196 (55%), Gaps = 38/196 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKSALFNR+ G +IV D GVTRDR+Y ++ W +F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSALFNRIAGERISIVEDVEGVTRDRIYTKAEWLNRQFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAI 339
+ G+T ADE +A L + + K +ILAVNK ++P R I +F++LG P P+S+
Sbjct: 93 KEGITDADEYVAKILYRTH--KPVILAVNKVDNPEMRSAIY---DFYALGLGDPYPVSSA 147
Query: 340 SGTGTGELLDLVCSEL 355
G GTG++LD + L
Sbjct: 148 HGIGTGDVLDAIVDNL 163
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 94/198 (47%), Gaps = 41/198 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
+ +++GRPNVGKS+L N ++G +R I G TRD + +F E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAI-DTTFTDEEGQEFTMIDTAGMR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A AI+ S +++ +++
Sbjct: 235 KSGKVYEN-------------------TEKYSVMR--------AMRAIDRSDIVLMVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSE--------FWSLGFSPL 334
+ G+ D+ IA + + K I++ VNK ++ +K V++ F + ++P+
Sbjct: 268 EEGIREYDKRIAGFAHE--AGKGIVVVVNKWDAIKKDNRTVAQWETDIRDNFQYISYAPI 325
Query: 335 P-ISAISGTGTGELLDLV 351
+SA++ +L D++
Sbjct: 326 VFVSAVTKQRLHKLPDVI 343
>gi|218282475|ref|ZP_03488734.1| hypothetical protein EUBIFOR_01316 [Eubacterium biforme DSM 3989]
gi|218216571|gb|EEC90109.1| hypothetical protein EUBIFOR_01316 [Eubacterium biforme DSM 3989]
Length = 435
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/191 (41%), Positives = 102/191 (53%), Gaps = 34/191 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS +FNRL+G ++IV D PGVTRDR+YG W F L+DTGG+
Sbjct: 6 VAIVGRPNVGKSTIFNRLIGQRKSIVDDTPGVTRDRIYGEVEWLTQTFRLIDTGGIQ--- 62
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+ED A I M Q AIEE+ VIIFL + G
Sbjct: 63 ------IEDQAFAQEINM---------------------QVDIAIEEADVIIFLTSAKEG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+ D IA L+K K +ILA NK ++P M V EF++LG P+ +S G G
Sbjct: 96 VMTDDTVIARKLQK--CKKPVILACNKVDNPEMQ-MNVYEFYALGLGDPVVLSGAHGIGL 152
Query: 345 GELLDLVCSEL 355
G+LLD+V +L
Sbjct: 153 GDLLDIVLEKL 163
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 95/202 (47%), Gaps = 38/202 (18%)
Query: 159 PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDT 218
P + ++GRPNVGKS+L N ++ +R IV + G TRD + + E+M++DT
Sbjct: 170 PYEGITSFCVIGRPNVGKSSLVNSILKEDRVIVSNVEGTTRDAIDTPFHVDDKEYMIIDT 229
Query: 219 GGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIF 278
G+ K NI E +I +A +AI+ S V++F
Sbjct: 230 AGIRKKGKIYENI-EKYSIL--------------------------RALSAIDRSNVVLF 262
Query: 279 LVDGQAGLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQV-----SEFWSLG 330
L+DG+ G+ D+ +A K +I+ NK E K + ++ ++F L
Sbjct: 263 LIDGEKGIRDQDKHVAGLAHD--AGKGVIIVYNKWDTVEKDEKTMAKIEKEIRAQFLYLN 320
Query: 331 FSPLPI-SAISGTGTGELLDLV 351
++P+ SA++G+ +L+ L+
Sbjct: 321 YAPIAFTSALTGSKVNQLIPLI 342
>gi|451343141|ref|ZP_21912217.1| ribosome-associated GTPase EngA [Eggerthia catenaformis OT 569 =
DSM 20559]
gi|449338137|gb|EMD17289.1| ribosome-associated GTPase EngA [Eggerthia catenaformis OT 569 =
DSM 20559]
Length = 435
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/195 (41%), Positives = 113/195 (57%), Gaps = 34/195 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGR NVGKS LFNR+VG +IV D PGVTRDR+Y R+ W EF ++DTGG+
Sbjct: 6 VAIVGRANVGKSTLFNRIVGERISIVEDTPGVTRDRIYARALWLTREFNIIDTGGIE--- 62
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+ED T +I + Q+ AIEE+ VIIF+V+G+ G
Sbjct: 63 ------LEDDDFTQSIKI---------------------QSEIAIEEADVIIFVVNGREG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+T+ DE +A L+K+ +K I+LAVNK + + + ++++LG P+P+S+ G G
Sbjct: 96 ITSEDEMVARILQKS--NKPIVLAVNKIDD-KIFADNIYDYYALGVGDPIPVSSAHGIGV 152
Query: 345 GELLDLVCSELKKVE 359
G+LLD V L K E
Sbjct: 153 GDLLDEVIHLLPKDE 167
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 81/167 (48%), Gaps = 29/167 (17%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
EH R I+GRPNVGKS+L N L+G +R IV + G TRD + ++ ++DT
Sbjct: 171 EHDDIRFCIIGRPNVGKSSLTNALLGEDRVIVSEIEGTTRDAINCSFEKDGTKYTVIDTA 230
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G+ K NI + +V R A +A+E S V++ +
Sbjct: 231 GMRKRGKIYENI-------------------EKYSVLR--------ALSALENSDVVLVV 263
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
+DG+ G+ D+ IA + ++ K ++ VNK ++ +K +++F
Sbjct: 264 LDGERGIIEQDKHIAGYAHQS--GKGVLFVVNKWDAVKKDEKTMAKF 308
>gi|449897548|ref|ZP_21790062.1| GTP-binding protein EngA [Streptococcus mutans R221]
gi|449261203|gb|EMC58684.1| GTP-binding protein EngA [Streptococcus mutans R221]
Length = 436
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 107/194 (55%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKSALFNR+ G +IV D GVTRDR+Y ++ W +F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSALFNRIAGERISIVEDVEGVTRDRIYTKAEWLNRQFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A L + + K +ILAVNK ++P + +F++LG P P+S+ G
Sbjct: 93 KEGITDADEYVAKILYRTH--KPVILAVNKVDNPEMR-STIYDFYALGLGDPYPVSSAHG 149
Query: 342 TGTGELLDLVCSEL 355
GTG++LD + L
Sbjct: 150 IGTGDVLDAIVDNL 163
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 93/198 (46%), Gaps = 41/198 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
+ +++GRPNVGKS+L N ++G +R I G TRD + +F E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAI-DTTFTDEEGQEFTMIDTAGMR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R AI+ S +++ +++
Sbjct: 235 KSGKVYEN-------------------TEKYSVMR--------TMRAIDRSDIVLMVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSE--------FWSLGFSPL 334
+ G+ D+ IA + + K I++ VNK ++ +K V++ F + ++P+
Sbjct: 268 EEGIREYDKRIAGFAHE--AGKGIVVVVNKWDAIKKDNRTVAQWEADIRDNFQYIPYAPI 325
Query: 335 P-ISAISGTGTGELLDLV 351
+SA++ +L D++
Sbjct: 326 VFVSAVTKQRLHKLPDVI 343
>gi|450133215|ref|ZP_21870495.1| GTP-binding protein EngA [Streptococcus mutans NLML8]
gi|449151645|gb|EMB55372.1| GTP-binding protein EngA [Streptococcus mutans NLML8]
Length = 436
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 108/196 (55%), Gaps = 38/196 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKSALFNR+ G +IV D GVTRDR+Y ++ W +F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSALFNRIAGERISIVEDVEGVTRDRIYTKAEWLNRQFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAI 339
+ G+T ADE +A L + + K +ILAVNK ++P R I +F++LG P P+S+
Sbjct: 93 KEGITDADEYVAKILYRTH--KPVILAVNKVDNPEMRSAIY---DFYALGLGDPYPVSSA 147
Query: 340 SGTGTGELLDLVCSEL 355
G GTG++LD + L
Sbjct: 148 HGIGTGDVLDAIVDNL 163
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 94/198 (47%), Gaps = 41/198 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
+ +++GRPNVGKS+L N ++G +R I G TRD + +F E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAI-DTTFTDEEGQEFTMIDTAGMR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A AI+ S +++ +++
Sbjct: 235 KSGKVYEN-------------------TEKYSVMR--------AMRAIDRSDIVLMVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPL 334
+ G+ D+ IA + + K I++ VNK ++ +K ++ +F + ++P+
Sbjct: 268 EEGIREYDKRIAGFAHE--AGKGIVVVVNKWDTIKKDNHTMAQWETDIREQFQYIPYAPI 325
Query: 335 P-ISAISGTGTGELLDLV 351
+SA++ +L D++
Sbjct: 326 VFVSAVTKQRLHKLPDVI 343
>gi|223933730|ref|ZP_03625704.1| small GTP-binding protein [Streptococcus suis 89/1591]
gi|302024351|ref|ZP_07249562.1| GTP-binding protein EngA [Streptococcus suis 05HAS68]
gi|330833346|ref|YP_004402171.1| GTP-binding protein EngA [Streptococcus suis ST3]
gi|386584749|ref|YP_006081152.1| GTP-binding protein EngA [Streptococcus suis D9]
gi|223897611|gb|EEF63998.1| small GTP-binding protein [Streptococcus suis 89/1591]
gi|329307569|gb|AEB81985.1| GTP-binding protein EngA [Streptococcus suis ST3]
gi|353736895|gb|AER17904.1| GTP-binding protein EngA [Streptococcus suis D9]
Length = 436
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 106/194 (54%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRKFSLIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE ++ L K +K +IL VNK ++P + +F+SLG P P+S++ G
Sbjct: 93 KEGVTDADEYVSRILYKT--NKPVILVVNKVDNPEMR-NDIYDFYSLGLGDPYPVSSVHG 149
Query: 342 TGTGELLDLVCSEL 355
GTG++LD + L
Sbjct: 150 IGTGDVLDAIIENL 163
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 71/155 (45%), Gaps = 30/155 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G R I G TRD + E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEERVIASPVAGTTRDAIDTHFTDPEGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AIE S VI+ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIERSDVILMVINAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+ D+ IA + + K +I+ VNK ++ K
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGMIIVVNKWDTLEK 301
>gi|450116857|ref|ZP_21864699.1| GTP-binding protein EngA [Streptococcus mutans ST1]
gi|449226631|gb|EMC26140.1| GTP-binding protein EngA [Streptococcus mutans ST1]
Length = 436
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 108/196 (55%), Gaps = 38/196 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKSALFNR+ G +IV D GVTRDR+Y ++ W +F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSALFNRIAGERISIVEDVEGVTRDRIYTKAEWLNRQFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAI 339
+ G+T ADE +A L + + K +ILAVNK ++P R I +F++LG P P+S+
Sbjct: 93 KEGITDADEYVAKILYRTH--KPVILAVNKVDNPEMRSAIY---DFYALGLGDPYPVSSA 147
Query: 340 SGTGTGELLDLVCSEL 355
G GTG++LD + L
Sbjct: 148 HGIGTGDVLDAIVDNL 163
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 94/198 (47%), Gaps = 41/198 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
+ +++GRPNVGKS+L N ++G +R I G TRD + +F E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAI-DTTFTDEEGQEFTMIDTAGMR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A AI+ S +++ +++
Sbjct: 235 KSGKVYEN-------------------TEKYSVMR--------AMRAIDRSDIVLMVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSE--------FWSLGFSPL 334
+ G+ D+ IA + + K I++ VNK ++ +K V++ F + ++P+
Sbjct: 268 EEGIREYDKRIAGFAHE--AGKGIVVVVNKWDAIKKDNRTVAQWETDIRDNFQYIPYAPI 325
Query: 335 P-ISAISGTGTGELLDLV 351
+SA++ +L D++
Sbjct: 326 VFVSAVTKQRLHKLPDVI 343
>gi|24380270|ref|NP_722225.1| GTP-binding protein Der [Streptococcus mutans UA159]
gi|449864336|ref|ZP_21778260.1| GTP-binding protein EngA [Streptococcus mutans U2B]
gi|449870782|ref|ZP_21780828.1| GTP-binding protein EngA [Streptococcus mutans 8ID3]
gi|449903709|ref|ZP_21792279.1| GTP-binding protein EngA [Streptococcus mutans M230]
gi|449918828|ref|ZP_21797569.1| GTP-binding protein EngA [Streptococcus mutans 1SM1]
gi|449959016|ref|ZP_21810024.1| GTP-binding protein EngA [Streptococcus mutans 4VF1]
gi|449983891|ref|ZP_21818724.1| GTP-binding protein EngA [Streptococcus mutans NFSM2]
gi|450012214|ref|ZP_21829517.1| GTP-binding protein EngA [Streptococcus mutans A19]
gi|450022680|ref|ZP_21830078.1| GTP-binding protein EngA [Streptococcus mutans U138]
gi|450046712|ref|ZP_21839095.1| GTP-binding protein EngA [Streptococcus mutans N34]
gi|450082882|ref|ZP_21852595.1| GTP-binding protein EngA [Streptococcus mutans N66]
gi|450137546|ref|ZP_21871724.1| GTP-binding protein EngA [Streptococcus mutans NLML1]
gi|450145281|ref|ZP_21874494.1| GTP-binding protein EngA [Streptococcus mutans 1ID3]
gi|450176371|ref|ZP_21885762.1| GTP-binding protein EngA [Streptococcus mutans SM1]
gi|37999686|sp|Q8DS90.1|DER_STRMU RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|24378281|gb|AAN59531.1|AE015016_15 phosphoglycerate dehydrogenase [Streptococcus mutans UA159]
gi|449149569|gb|EMB53365.1| GTP-binding protein EngA [Streptococcus mutans 1ID3]
gi|449156006|gb|EMB59491.1| GTP-binding protein EngA [Streptococcus mutans 8ID3]
gi|449159974|gb|EMB63268.1| GTP-binding protein EngA [Streptococcus mutans 1SM1]
gi|449169578|gb|EMB72346.1| GTP-binding protein EngA [Streptococcus mutans 4VF1]
gi|449180845|gb|EMB82982.1| GTP-binding protein EngA [Streptococcus mutans NFSM2]
gi|449188655|gb|EMB90356.1| GTP-binding protein EngA [Streptococcus mutans A19]
gi|449194582|gb|EMB95934.1| GTP-binding protein EngA [Streptococcus mutans U138]
gi|449198425|gb|EMB99538.1| GTP-binding protein EngA [Streptococcus mutans N34]
gi|449214070|gb|EMC14381.1| GTP-binding protein EngA [Streptococcus mutans N66]
gi|449235121|gb|EMC34094.1| GTP-binding protein EngA [Streptococcus mutans NLML1]
gi|449245353|gb|EMC43692.1| GTP-binding protein EngA [Streptococcus mutans SM1]
gi|449260616|gb|EMC58114.1| GTP-binding protein EngA [Streptococcus mutans M230]
gi|449264985|gb|EMC62317.1| GTP-binding protein EngA [Streptococcus mutans U2B]
Length = 436
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 108/196 (55%), Gaps = 38/196 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKSALFNR+ G +IV D GVTRDR+Y ++ W +F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSALFNRIAGERISIVEDVEGVTRDRIYTKAEWLNRQFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAI 339
+ G+T ADE +A L + + K +ILAVNK ++P R I +F++LG P P+S+
Sbjct: 93 KEGITDADEYVAKILYRTH--KPVILAVNKVDNPEMRSAIY---DFYALGLGDPYPVSSA 147
Query: 340 SGTGTGELLDLVCSEL 355
G GTG++LD + L
Sbjct: 148 HGIGTGDVLDAIVDNL 163
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 94/198 (47%), Gaps = 41/198 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
+ +++GRPNVGKS+L N ++G +R I G TRD + +F E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAI-DTTFTDEEGQEFTMIDTAGMR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A AI+ S +++ +++
Sbjct: 235 KSGKVYEN-------------------TEKYSVMR--------AMRAIDRSDIVLMVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSE--------FWSLGFSPL 334
+ G+ D+ IA + + K I++ VNK ++ +K V++ F + ++P+
Sbjct: 268 EEGIREYDKRIAGFAHE--AGKGIVVVVNKWDAIKKDNRTVAQWEADIRDNFQYIPYAPI 325
Query: 335 P-ISAISGTGTGELLDLV 351
+SA++ +L D++
Sbjct: 326 VFVSAVTKQRLHKLPDVI 343
>gi|25011707|ref|NP_736102.1| GTP-binding protein EngA [Streptococcus agalactiae NEM316]
gi|41017045|sp|Q8E3T9.1|DER_STRA3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|24413247|emb|CAD47326.1| Unknown [Streptococcus agalactiae NEM316]
Length = 436
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/195 (39%), Positives = 107/195 (54%), Gaps = 34/195 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 2 VLPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTTGEWLNRKFSLIDTGGI 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+V A I+ QA A+ E+ VI+F+V
Sbjct: 62 DDVD------------------------------APFMEQIKHQADIAMTEADVIVFVVS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE ++ L K +K +ILAVNK ++P + +F+SLG P P+S++
Sbjct: 92 GKEGVTDADEYVSLILYKT--NKPVILAVNKVDNPEMR-NDIYDFYSLGLGDPYPLSSVH 148
Query: 341 GTGTGELLDLVCSEL 355
G GTG++LD + L
Sbjct: 149 GIGTGDILDAIVENL 163
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 81/179 (45%), Gaps = 38/179 (21%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
R +++GRPNVGKS+L N ++G +R I G TRD + + E+ ++DT G+
Sbjct: 176 RFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTNFVDSQGQEYTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R + AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------SMRAIDRSDVVLMVINAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSE--------FWSLGFSPL 334
G+ D+ IA + + K II+ VNK ++ K VS+ F L ++P+
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGIIIVVNKWDTIEKDSHTVSQWEADIRDNFQFLSYAPI 325
>gi|332982413|ref|YP_004463854.1| ribosome-associated GTPase EngA [Mahella australiensis 50-1 BON]
gi|332700091|gb|AEE97032.1| ribosome-associated GTPase EngA [Mahella australiensis 50-1 BON]
Length = 437
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 111/192 (57%), Gaps = 35/192 (18%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAI+GRPNVGKS LFNRLVG +IV D PG+TRDR+Y W F LVDTGG
Sbjct: 6 VAIIGRPNVGKSTLFNRLVGRRISIVDDTPGITRDRIYADVEWTGKIFSLVDTGG----- 60
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
I + +++ V +M RQA AI+ + VI+ +VD G
Sbjct: 61 --------------------IDFSGKDSIVNQMI----RQAQYAIDTADVILLVVDANEG 96
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCES-PRKGIMQVSEFWSLGFS-PLPISAISGTG 343
+T+ADEE+AD LR++ +K ++L NK ++ RK ++ +F+ LG P+PISA +G G
Sbjct: 97 MTSADEEVADILRRS--NKSVLLVCNKVDNFNRKDLLY--DFYKLGLGDPIPISAGNGLG 152
Query: 344 TGELLDLVCSEL 355
G+LLD + + +
Sbjct: 153 IGDLLDKIVAHI 164
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 95/199 (47%), Gaps = 44/199 (22%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHE---FMLVDTGGV 221
R+A++G+PN GKS++ NRL+G R IV D+PG TRD + EHE ++L+DT G+
Sbjct: 177 RIAVIGKPNAGKSSIVNRLLGQERVIVSDQPGTTRDAI---DVLIEHEGDRYILIDTAGL 233
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+K I A +V+R A A++ S V ++D
Sbjct: 234 RRKAK-------------------INEAVERYSVSR--------ALEAVQRSDVAALVID 266
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS--------LGFSP 333
G+T D +IA + + K +I+ +NK + K VS + +G++P
Sbjct: 267 AVEGVTEQDAKIAGFAHEK--GKGLIVLLNKWDLIEKDNKTVSRYKQDIAEKLGFIGYAP 324
Query: 334 -LPISAISGTGTGELLDLV 351
L ISA +G ++L +V
Sbjct: 325 VLFISAKTGQRMDKILPMV 343
>gi|331081965|ref|ZP_08331093.1| GTP-binding protein engA [Lachnospiraceae bacterium 6_1_63FAA]
gi|330405560|gb|EGG85090.1| GTP-binding protein engA [Lachnospiraceae bacterium 6_1_63FAA]
Length = 441
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 106/193 (54%), Gaps = 32/193 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN L G +IV D PGVTRDR+Y W + F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNALAGEKISIVKDTPGVTRDRIYAEVTWLDKTFTMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P D+ + S + QA AI+ + VIIF+ D +
Sbjct: 62 ----EPE-SNDVIL----------------------SQMREQAQIAIDTADVIIFMTDVR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL AD ++AD LR++ K ++L VNK +S +K +M EF++LG P+PISA S
Sbjct: 95 QGLVDADSKVADMLRRS--KKPVVLVVNKVDSFQKFMMDTYEFYNLGIGEPVPISAASML 152
Query: 343 GTGELLDLVCSEL 355
G G++L+ V
Sbjct: 153 GLGDMLEKVVEHF 165
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 97/204 (47%), Gaps = 38/204 (18%)
Query: 157 NVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLV 216
N E +P++A+VG+PNVGKS+L N+++G +R IV + G TRD + + + E+ +
Sbjct: 171 NDEEDEIPKIAVVGKPNVGKSSLINKILGEDRVIVSNIAGTTRDAIDTKVTYQGKEYTFI 230
Query: 217 DTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVI 276
DT G+ + + I E+L + I + A+E + V+
Sbjct: 231 DTAGL----RRKNKIKEELERYSII-----------------------RTVTAVERADVV 263
Query: 277 IFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFW-----SLGF 331
+ ++D G+T D +IA K +++AVNK ++ K + +F +L +
Sbjct: 264 VMMIDATEGVTEQDAKIAGIAHDR--GKGVVIAVNKWDAIEKNDKTIYKFTNKVRETLSY 321
Query: 332 SP----LPISAISGTGTGELLDLV 351
P + ISA +G +L + +
Sbjct: 322 MPYAEIMFISAHTGQRIPKLFETI 345
>gi|386578546|ref|YP_006074952.1| Small GTP-binding domain containing protein [Streptococcus suis
GZ1]
gi|292559009|gb|ADE32010.1| Small GTP-binding domain containing protein [Streptococcus suis
GZ1]
Length = 436
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 106/194 (54%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRKFSLIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE ++ L K +K +IL VNK ++P + +F+SLG P P+S++ G
Sbjct: 93 KEGVTDADEYVSRILYKT--NKPVILVVNKVDNPEMR-NDIYDFYSLGLGDPYPVSSVHG 149
Query: 342 TGTGELLDLVCSEL 355
GTG++LD + L
Sbjct: 150 IGTGDVLDAIIENL 163
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 71/155 (45%), Gaps = 30/155 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G R I G TRD + E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEERVIASPVAGTTRDAIDTHFTDPEGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AIE S VI+ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIERSDVILMVINAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+ D+ IA + + K +I+ VNK ++ K
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGMIIVVNKWDTLEK 301
>gi|449886519|ref|ZP_21786241.1| GTP-binding protein EngA [Streptococcus mutans SA41]
gi|449915848|ref|ZP_21796534.1| GTP-binding protein EngA [Streptococcus mutans 15JP3]
gi|449937351|ref|ZP_21804499.1| GTP-binding protein EngA [Streptococcus mutans 2ST1]
gi|450038881|ref|ZP_21835917.1| GTP-binding protein EngA [Streptococcus mutans T4]
gi|450078069|ref|ZP_21850804.1| GTP-binding protein EngA [Streptococcus mutans N3209]
gi|450098566|ref|ZP_21858066.1| GTP-binding protein EngA [Streptococcus mutans SF1]
gi|450153914|ref|ZP_21877464.1| GTP-binding protein EngA [Streptococcus mutans 21]
gi|450171033|ref|ZP_21883815.1| GTP-binding protein EngA [Streptococcus mutans SM4]
gi|6681650|dbj|BAA88823.1| phosphoglycerate dehydrogenase [Streptococcus mutans]
gi|449155958|gb|EMB59445.1| GTP-binding protein EngA [Streptococcus mutans 15JP3]
gi|449164419|gb|EMB67481.1| GTP-binding protein EngA [Streptococcus mutans 2ST1]
gi|449201009|gb|EMC02023.1| GTP-binding protein EngA [Streptococcus mutans T4]
gi|449210450|gb|EMC10911.1| GTP-binding protein EngA [Streptococcus mutans N3209]
gi|449221484|gb|EMC21258.1| GTP-binding protein EngA [Streptococcus mutans SF1]
gi|449238340|gb|EMC37110.1| GTP-binding protein EngA [Streptococcus mutans 21]
gi|449244686|gb|EMC43052.1| GTP-binding protein EngA [Streptococcus mutans SM4]
gi|449254131|gb|EMC52055.1| GTP-binding protein EngA [Streptococcus mutans SA41]
Length = 436
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 108/196 (55%), Gaps = 38/196 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKSALFNR+ G +IV D GVTRDR+Y ++ W +F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSALFNRIAGERISIVEDVEGVTRDRIYTKAEWLNRQFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAI 339
+ G+T ADE +A L + + K +ILAVNK ++P R I +F++LG P P+S+
Sbjct: 93 KEGITDADEYVAKILYRTH--KPVILAVNKVDNPEMRSAIY---DFYALGLGDPYPVSSA 147
Query: 340 SGTGTGELLDLVCSEL 355
G GTG++LD + L
Sbjct: 148 HGIGTGDVLDAIVDNL 163
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 94/198 (47%), Gaps = 41/198 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
+ +++GRPNVGKS+L N ++G +R I G TRD + +F E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAI-DTTFTDEEGQEFTMIDTAGMR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A AI+ S +++ +++
Sbjct: 235 KSGKVYEN-------------------TEKYSVMR--------AMRAIDRSDIVLMVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSE--------FWSLGFSPL 334
+ G+ D+ IA + + K I++ VNK ++ +K V++ F + ++P+
Sbjct: 268 EEGIREYDKRIAGFAHE--AGKGIVVVVNKWDAIKKDNRTVAQWETDIRDNFQYIPYAPI 325
Query: 335 P-ISAISGTGTGELLDLV 351
+SA++ +L D++
Sbjct: 326 VFVSAVTKQRLHKLPDVI 343
>gi|290579757|ref|YP_003484149.1| phosphoglycerate dehydrogenase [Streptococcus mutans NN2025]
gi|449970071|ref|ZP_21813608.1| GTP-binding protein EngA [Streptococcus mutans 2VS1]
gi|450028642|ref|ZP_21832289.1| GTP-binding protein EngA [Streptococcus mutans G123]
gi|450036755|ref|ZP_21835602.1| GTP-binding protein EngA [Streptococcus mutans M21]
gi|450058283|ref|ZP_21843033.1| GTP-binding protein EngA [Streptococcus mutans NLML4]
gi|450071040|ref|ZP_21847936.1| GTP-binding protein EngA [Streptococcus mutans M2A]
gi|450093658|ref|ZP_21856687.1| GTP-binding protein EngA [Streptococcus mutans W6]
gi|450111133|ref|ZP_21862520.1| GTP-binding protein EngA [Streptococcus mutans SM6]
gi|450148403|ref|ZP_21875589.1| GTP-binding protein EngA [Streptococcus mutans 14D]
gi|450163737|ref|ZP_21880926.1| GTP-binding protein EngA [Streptococcus mutans B]
gi|254996656|dbj|BAH87257.1| phosphoglycerate dehydrogenase [Streptococcus mutans NN2025]
gi|449173688|gb|EMB76241.1| GTP-binding protein EngA [Streptococcus mutans 2VS1]
gi|449193303|gb|EMB94690.1| GTP-binding protein EngA [Streptococcus mutans M21]
gi|449195367|gb|EMB96691.1| GTP-binding protein EngA [Streptococcus mutans G123]
gi|449204069|gb|EMC04888.1| GTP-binding protein EngA [Streptococcus mutans NLML4]
gi|449212886|gb|EMC13235.1| GTP-binding protein EngA [Streptococcus mutans M2A]
gi|449217139|gb|EMC17213.1| GTP-binding protein EngA [Streptococcus mutans W6]
gi|449224161|gb|EMC23811.1| GTP-binding protein EngA [Streptococcus mutans SM6]
gi|449235865|gb|EMC34808.1| GTP-binding protein EngA [Streptococcus mutans 14D]
gi|449242597|gb|EMC41166.1| GTP-binding protein EngA [Streptococcus mutans B]
Length = 436
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 108/196 (55%), Gaps = 38/196 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKSALFNR+ G +IV D GVTRDR+Y ++ W +F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSALFNRIAGERISIVEDVEGVTRDRIYTKAEWLNRQFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAI 339
+ G+T ADE +A L + + K +ILAVNK ++P R I +F++LG P P+S+
Sbjct: 93 KEGITDADEYVAKILYRTH--KPVILAVNKVDNPEMRSAIY---DFYALGLGDPYPVSSA 147
Query: 340 SGTGTGELLDLVCSEL 355
G GTG++LD + L
Sbjct: 148 HGIGTGDVLDAIVDNL 163
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 94/198 (47%), Gaps = 41/198 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
+ +++GRPNVGKS+L N ++G +R I G TRD + +F E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAI-DTTFTDEEGQEFTMIDTAGMR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A AI+ S +++ +++
Sbjct: 235 KSGKVYEN-------------------TEKYSVMR--------AMRAIDRSDIVLMVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSE--------FWSLGFSPL 334
+ G+ D+ IA + + K I++ VNK ++ +K V++ F + ++P+
Sbjct: 268 EEGIREYDKRIAGFAHE--AGKGIVVVVNKWDAIKKDNRTVAQWEADIRDNFQYIPYAPI 325
Query: 335 P-ISAISGTGTGELLDLV 351
+SA++ +L D++
Sbjct: 326 VFVSAVTKQRLHKLPDVI 343
>gi|387785437|ref|YP_006250533.1| phosphoglycerate dehydrogenase [Streptococcus mutans LJ23]
gi|450089352|ref|ZP_21855169.1| GTP-binding protein EngA [Streptococcus mutans NV1996]
gi|379131838|dbj|BAL68590.1| phosphoglycerate dehydrogenase [Streptococcus mutans LJ23]
gi|449215690|gb|EMC15870.1| GTP-binding protein EngA [Streptococcus mutans NV1996]
Length = 436
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 108/196 (55%), Gaps = 38/196 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKSALFNR+ G +IV D GVTRDR+Y ++ W +F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSALFNRIAGERISIVEDVEGVTRDRIYTKAEWLNRQFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAI 339
+ G+T ADE +A L + + K +ILAVNK ++P R I +F++LG P P+S+
Sbjct: 93 KEGITDADEYVAKILYRTH--KPVILAVNKVDNPEMRSAIY---DFYALGLGDPYPVSSA 147
Query: 340 SGTGTGELLDLVCSEL 355
G GTG++LD + L
Sbjct: 148 HGIGTGDVLDAIVDNL 163
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 94/198 (47%), Gaps = 41/198 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
+ +++GRPNVGKS+L N ++G +R I G TRD + +F E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAI-DTTFTDEEGQEFTMIDTAGMR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A AI+ S +++ +++
Sbjct: 235 KSGKVYEN-------------------TEKYSVMR--------AMRAIDRSDIVLMVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPL 334
+ G+ D+ IA + + K I++ VNK ++ +K ++ +F + ++P+
Sbjct: 268 EEGIREYDKRIAGFAHE--AGKGIVVVVNKWDTIKKDNHTMAQWETDIREQFQYIPYAPI 325
Query: 335 P-ISAISGTGTGELLDLV 351
+SA++ +L D++
Sbjct: 326 VFVSALTKQRLHKLPDMI 343
>gi|450049808|ref|ZP_21839897.1| GTP-binding protein EngA [Streptococcus mutans NFSM1]
gi|449203298|gb|EMC04164.1| GTP-binding protein EngA [Streptococcus mutans NFSM1]
Length = 436
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 108/196 (55%), Gaps = 38/196 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKSALFNR+ G +IV D GVTRDR+Y ++ W +F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSALFNRIAGERISIVEDVEGVTRDRIYTKAEWLNRQFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAI 339
+ G+T ADE +A L + + K +ILAVNK ++P R I +F++LG P P+S+
Sbjct: 93 KEGITDADEYVAKILYRTH--KPVILAVNKVDNPEMRSAIY---DFYALGLGDPYPVSSA 147
Query: 340 SGTGTGELLDLVCSEL 355
G GTG++LD + L
Sbjct: 148 HGIGTGDVLDAIVDNL 163
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 93/198 (46%), Gaps = 41/198 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
+ +++GRPNVGKS+L N ++G +R I G TRD + +F E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAI-DTTFTDEEGQEFTMIDTAGMR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A AI+ S +++ +++
Sbjct: 235 KSGKVYEN-------------------TEKYSVMR--------AMRAIDRSDIVLMVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSE--------FWSLGFSPL 334
+ G+ D+ IA + + K I++ VNK ++ +K V + F + ++P+
Sbjct: 268 EEGIREYDKRIAGFAHE--AGKGIVVVVNKWDAIKKDNRTVVQWEADIRDNFQYIPYAPI 325
Query: 335 P-ISAISGTGTGELLDLV 351
+SA++ +L D++
Sbjct: 326 VFVSAVTKQRLHKLPDVI 343
>gi|260588686|ref|ZP_05854599.1| ribosome-associated GTPase EngA [Blautia hansenii DSM 20583]
gi|260541161|gb|EEX21730.1| ribosome-associated GTPase EngA [Blautia hansenii DSM 20583]
Length = 441
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 106/193 (54%), Gaps = 32/193 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN L G +IV D PGVTRDR+Y W + F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNALAGEKISIVKDTPGVTRDRIYAEVTWLDKTFTMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P D+ + S + QA AI+ + VIIF+ D +
Sbjct: 62 ----EPE-SNDVIL----------------------SQMREQAQIAIDTADVIIFMTDVR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL AD ++AD LR++ K ++L VNK +S +K +M EF++LG P+PISA S
Sbjct: 95 QGLVDADSKVADMLRRS--KKPVVLVVNKVDSFQKFMMDTYEFYNLGIGEPVPISAASML 152
Query: 343 GTGELLDLVCSEL 355
G G++L+ V
Sbjct: 153 GLGDMLEKVVEHF 165
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 83/170 (48%), Gaps = 29/170 (17%)
Query: 157 NVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLV 216
N E +P++A+VG+PNVGKS+L N+++G +R IV + G TRD + + + E+ +
Sbjct: 171 NDEEDEIPKIAVVGKPNVGKSSLINKILGEDRVIVSNIAGTTRDAIDTKVTYQGKEYTFI 230
Query: 217 DTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVI 276
DT G+ + + I E+L + I + A+E + V+
Sbjct: 231 DTAGL----RRKNKIKEELERYSII-----------------------RTVTAVERADVV 263
Query: 277 IFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
+ ++D G+T D +IA K +++AVNK ++ K + +F
Sbjct: 264 VMMIDATEGVTEQDAKIAGIAHDR--GKGVVIAVNKWDAIEKNDKTIYKF 311
>gi|146319380|ref|YP_001199092.1| GTP-binding protein EngA [Streptococcus suis 05ZYH33]
gi|146321585|ref|YP_001201296.1| GTP-binding protein EngA [Streptococcus suis 98HAH33]
gi|253752406|ref|YP_003025547.1| GTP-binding protein EngA [Streptococcus suis SC84]
gi|253754232|ref|YP_003027373.1| GTP-binding protein EngA [Streptococcus suis P1/7]
gi|253756166|ref|YP_003029306.1| GTP-binding protein EngA [Streptococcus suis BM407]
gi|386580619|ref|YP_006077024.1| GTP-binding protein EngA [Streptococcus suis JS14]
gi|386582692|ref|YP_006079096.1| GTP-binding protein EngA [Streptococcus suis SS12]
gi|386586818|ref|YP_006083220.1| GTP-binding protein EngA [Streptococcus suis D12]
gi|386588815|ref|YP_006085216.1| GTP-binding protein EngA [Streptococcus suis A7]
gi|403062163|ref|YP_006650379.1| GTP-binding protein Der [Streptococcus suis S735]
gi|166225866|sp|A4W3F7.1|DER_STRS2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|166225868|sp|A4VX53.1|DER_STRSY RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|145690186|gb|ABP90692.1| Predicted GTPase [Streptococcus suis 05ZYH33]
gi|145692391|gb|ABP92896.1| Predicted GTPase [Streptococcus suis 98HAH33]
gi|251816695|emb|CAZ52336.1| GTP-binding protein EngA [Streptococcus suis SC84]
gi|251818630|emb|CAZ56464.1| GTP-binding protein EngA [Streptococcus suis BM407]
gi|251820478|emb|CAR47214.1| GTP-binding protein EngA [Streptococcus suis P1/7]
gi|319758811|gb|ADV70753.1| GTP-binding protein EngA [Streptococcus suis JS14]
gi|353734838|gb|AER15848.1| GTP-binding protein EngA [Streptococcus suis SS12]
gi|353738964|gb|AER19972.1| GTP-binding protein EngA [Streptococcus suis D12]
gi|354985976|gb|AER44874.1| GTP-binding protein EngA [Streptococcus suis A7]
gi|402809489|gb|AFR00981.1| GTP-binding protein Der [Streptococcus suis S735]
Length = 436
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 106/194 (54%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRKFSLIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE ++ L K +K +IL VNK ++P + +F+SLG P P+S++ G
Sbjct: 93 KEGVTDADEYVSRILYKT--NKPVILVVNKVDNPEMR-NDIYDFYSLGLGDPYPVSSVHG 149
Query: 342 TGTGELLDLVCSEL 355
GTG++LD + L
Sbjct: 150 IGTGDVLDAIIENL 163
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 71/155 (45%), Gaps = 30/155 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G R I G TRD + E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEERVIASPVAGTTRDAIDTHFTDPEGQEFTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AIE S VI+ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------AMRAIERSDVILMVINAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+ D+ IA + + K +I+ VNK ++ K
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGMIIVVNKWDTLEK 301
>gi|449880562|ref|ZP_21783906.1| GTP-binding protein EngA [Streptococcus mutans SA38]
gi|449990853|ref|ZP_21821737.1| GTP-binding protein EngA [Streptococcus mutans NVAB]
gi|450125940|ref|ZP_21867880.1| GTP-binding protein EngA [Streptococcus mutans U2A]
gi|449181371|gb|EMB83474.1| GTP-binding protein EngA [Streptococcus mutans NVAB]
gi|449231935|gb|EMC31082.1| GTP-binding protein EngA [Streptococcus mutans U2A]
gi|449252840|gb|EMC50809.1| GTP-binding protein EngA [Streptococcus mutans SA38]
Length = 436
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 108/196 (55%), Gaps = 38/196 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKSALFNR+ G +IV D GVTRDR+Y ++ W +F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSALFNRIAGERISIVEDVEGVTRDRIYTKAEWLNRQFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAI 339
+ G+T ADE +A L + + K +ILAVNK ++P R I +F++LG P P+S+
Sbjct: 93 KEGITDADEYVAKILYRTH--KPVILAVNKVDNPEMRSAIY---DFYALGLGDPYPVSSA 147
Query: 340 SGTGTGELLDLVCSEL 355
G GTG++LD + L
Sbjct: 148 HGIGTGDVLDAIVDNL 163
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 94/198 (47%), Gaps = 41/198 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
+ +++GRPNVGKS+L N ++G +R I G TRD + +F E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAI-DTTFTDEEGQEFTMIDTAGMR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A AI+ S +++ +++
Sbjct: 235 KSGKVYEN-------------------TEKYSVMR--------AMRAIDRSDIVLMVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSE--------FWSLGFSPL 334
+ G+ D+ IA + + K I++ VNK ++ +K V++ F + ++P+
Sbjct: 268 EEGIREYDKRIAGFAHE--AGKGIVVVVNKWDAIKKDNRTVAQWEADIRDNFQYIPYAPI 325
Query: 335 P-ISAISGTGTGELLDLV 351
+SA++ +L D++
Sbjct: 326 VFVSAVTKQRLHKLPDVI 343
>gi|56476106|ref|YP_157695.1| GTP-binding protein EngA [Aromatoleum aromaticum EbN1]
gi|81821192|sp|Q5P7B7.1|DER_AZOSE RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|56312149|emb|CAI06794.1| GTP-binding protein engA [Aromatoleum aromaticum EbN1]
Length = 442
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 105/191 (54%), Gaps = 33/191 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P + +VGRPNVGKS LFNRL A+V D+PG+TRDR YG G+ ++++VDT G
Sbjct: 3 PTIVLVGRPNVGKSTLFNRLTKTRDALVADQPGLTRDRHYGIGRVGDRDYLVVDTAGFDP 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
V+K IM ++A RQA AI E+ ++F+VDG+
Sbjct: 63 VAKD--GIMHEMA---------------------------RQAEQAIAEADALLFMVDGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
+GLT DE+IA LR+ + + L VNK E + M +EF +LG PLP+SA G
Sbjct: 94 SGLTPHDEQIAARLRR--AGRPVYLVVNKSEGMER-TMVAAEFHALGLGDPLPVSASHGE 150
Query: 343 GTGELLDLVCS 353
G +LLDLV
Sbjct: 151 GVKQLLDLVLG 161
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 89/198 (44%), Gaps = 42/198 (21%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRM---YGRSFWGEHEFMLVDTGG 220
PR+AIVGRPNVGKS N L+G R I D PG TRD + + R G H + L+DT G
Sbjct: 177 PRIAIVGRPNVGKSTFVNSLLGEERVIAFDMPGTTRDAIAIPFERD--GRH-YTLIDTAG 233
Query: 221 VLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLV 280
+ K + E ++ T+ AIE++ V++ ++
Sbjct: 234 LRRRGKVFEAV-EKFSVIKTL--------------------------QAIEQANVVVLVL 266
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSEFWSLGFSPLP-- 335
D ++ D IA ++ + + +++AVNK + R+ +++ L F
Sbjct: 267 DASQDISDQDAHIAGFILE--AGRALVVAVNKWDDVDDYRRELIKQDLTRKLNFLSFARF 324
Query: 336 --ISAISGTGTGELLDLV 351
ISA+ G G ++ V
Sbjct: 325 HYISALKGAGVAAVMKSV 342
>gi|320159766|ref|YP_004172990.1| GTP-binding protein EngA [Anaerolinea thermophila UNI-1]
gi|319993619|dbj|BAJ62390.1| GTP-binding protein EngA [Anaerolinea thermophila UNI-1]
Length = 455
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/201 (42%), Positives = 112/201 (55%), Gaps = 26/201 (12%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VA+VGRPNVGKS LFNRL G AIV D PG TRDR++ + W EF +VDTGG+
Sbjct: 6 VALVGRPNVGKSTLFNRLAGEPLAIVDDIPGTTRDRLFATAEWSGVEFDIVDTGGI---- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
P+ G E + + + A I QA AI+++ I+FLVD +G
Sbjct: 62 --DPS-------AARAGREPLSIGS-----AEFIKEIRSQAELAIQDADAILFLVDAISG 107
Query: 286 LTAADEEIADWLRK--NYMDKF----IILAVNKCESPRKGIMQVSEFWSLGFS-PLPISA 338
LT AD E+A LR+ +D + L VNK +S + SEF+ LG P PISA
Sbjct: 108 LTPADREVAQILRRKQQMVDGKPYPPVFLVVNKADSANLRAV-ASEFYELGMGEPYPISA 166
Query: 339 ISGTGTGELLDLVCSELKKVE 359
+ GTGTG+LLD + + L KVE
Sbjct: 167 LHGTGTGDLLDDLIASLPKVE 187
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 96/201 (47%), Gaps = 36/201 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVG+PN GKS+L NRLVG RAIV PG TRD + R + L+DT G+
Sbjct: 196 KIAIVGKPNAGKSSLLNRLVGEERAIVSPIPGTTRDAVDTRIEYNGVPITLIDTAGIRRR 255
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K +P + E ++ ++ AIE S V + ++D
Sbjct: 256 GKIEPGV-EKYSVLRSL--------------------------RAIERSDVALLMIDATT 288
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----LGF-SPLPISA 338
G+TA D IA ++ + + K ++ VNK ++ K ++E+ + L F +PI
Sbjct: 289 GITAQDTHIAGFILEAW--KSAVVLVNKWDAVEKDSHTMAEYTARLRHELNFMDYVPILF 346
Query: 339 ISGTGTGELLDLVCSELKKVE 359
IS TG+ +D V +V+
Sbjct: 347 ISAK-TGQRVDQVLPLALRVQ 366
>gi|78045106|ref|YP_360738.1| GTP-binding protein EngA [Carboxydothermus hydrogenoformans Z-2901]
gi|123575819|sp|Q3AAU6.1|DER_CARHZ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|77997221|gb|ABB16120.1| GTP-binding protein [Carboxydothermus hydrogenoformans Z-2901]
Length = 440
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 106/193 (54%), Gaps = 33/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNR++G AIV D PGVTRDR+Y + W F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTLFNRIIGERIAIVEDTPGVTRDRLYSEAEWQGKVFDLIDTGGL-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
EDL ITT + RE Q AI E+ +I+F+ D +
Sbjct: 62 ------EFSEDL-ITTKV---------RE------------QIEKAINEADLILFVCDSR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T+ DE +A LRK+ DK +IL NK + + + LG P P+SA +GT
Sbjct: 94 EGITSTDEAVAKNLRKS--DKPVILVANKVDDYLNPPANFYDLYRLGLGEPFPVSAANGT 151
Query: 343 GTGELLDLVCSEL 355
G+LLDLV S+L
Sbjct: 152 NVGDLLDLVISKL 164
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 99/201 (49%), Gaps = 38/201 (18%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
E+ + ++A+VGRPNVGKS+L N L+G R +V D PG TRD + ++ ++L+DT
Sbjct: 173 ENPVVKIAVVGRPNVGKSSLVNALLGEERVVVSDIPGTTRDAIDTPMWYQGKPYLLIDTA 232
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G+ + + I EDL + ++ AI + V + +
Sbjct: 233 GM----RRKSRIEEDLERYSV-----------------------NRSIKAIRRADVALLV 265
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSE--FWSLGF--- 331
+ + G+T D++IA + + + +I+ VNK E K + E ++ LGF
Sbjct: 266 ISAEEGVTEQDKKIAGLIHE--YGRGVIIVVNKWDLIEKDAKTADRYKEHIYFELGFLKY 323
Query: 332 SP-LPISAISGTGTGELLDLV 351
+P + +SA +G +L++LV
Sbjct: 324 APVIFVSAKTGQRLNKLMELV 344
>gi|389857236|ref|YP_006359479.1| GTP-binding protein EngA [Streptococcus suis ST1]
gi|353740954|gb|AER21961.1| GTP-binding protein EngA [Streptococcus suis ST1]
Length = 436
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 106/194 (54%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 3 LPTIAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYATGEWLNRKFSLIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A++E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQAEIAMDEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE ++ L K +K +IL VNK ++P + +F+SLG P P+S++ G
Sbjct: 93 KEGVTDADEYVSRILYKT--NKPVILVVNKVDNPEMR-NDIYDFYSLGLGDPYPVSSVHG 149
Query: 342 TGTGELLDLVCSEL 355
GTG++LD + L
Sbjct: 150 IGTGDVLDAIIENL 163
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 32/156 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRM--YGRSFWGEHEFMLVDTGGVL 222
+ +++GRPNVGKS+L N ++G R I G TRD + Y G+ EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEERVIASPVAGTTRDAIDTYFTDPEGQ-EFTMIDTAGMR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A AIE S VI+ +++
Sbjct: 235 KSGKVYEN-------------------TEKYSVMR--------AMRAIERSDVILMVINA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
+ G+ D+ IA + + K +I+ VNK ++ K
Sbjct: 268 EEGIREYDKRIAGFAHE--AGKGMIIVVNKWDTLEK 301
>gi|374338620|ref|YP_005095336.1| GTP-binding protein EngA [Streptococcus macedonicus ACA-DC 198]
gi|372284736|emb|CCF03028.1| GTP-binding protein EngA [Streptococcus macedonicus ACA-DC 198]
Length = 436
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 107/195 (54%), Gaps = 34/195 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 2 VLPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTTGEWLNRKFSLIDTGGI 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+V A I++QA A+ E+ VI+F+V
Sbjct: 62 DDVD------------------------------APFMEQIKQQANIAMTEADVIVFVVS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE ++ L + +K +IL VNK ++P + +F+SLG P P+S++
Sbjct: 92 GKEGVTDADEYVSKILYRT--NKPVILVVNKVDNPEMR-SDIYDFYSLGLGDPYPVSSVH 148
Query: 341 GTGTGELLDLVCSEL 355
G GTG++LD + L
Sbjct: 149 GIGTGDVLDAIVENL 163
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 100/221 (45%), Gaps = 43/221 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G R I G TRD + E E+ ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEERVIASPIAGTTRDAIDTNFTDSEGQEYTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R + AI+ S +++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------SMRAIDRSDIVLMVINAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPLP 335
G+ D+ IA + + K II+ VNK ++ K V+ +F L ++P+
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGIIIVVNKWDTIEKDNHTVARWEEDIRDQFQFLSYAPII 326
Query: 336 -ISAISGTGTGELLDLV----CSELKKVEVCIGFLLICNAI 371
+SA + +L D++ S+ K++ + +I +AI
Sbjct: 327 FVSAATKQRLNKLPDMIKKISASQNKRIPSAVLNDVIMDAI 367
>gi|238926984|ref|ZP_04658744.1| GTP-binding protein EngA [Selenomonas flueggei ATCC 43531]
gi|238885218|gb|EEQ48856.1| GTP-binding protein EngA [Selenomonas flueggei ATCC 43531]
Length = 441
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 80/191 (41%), Positives = 109/191 (57%), Gaps = 33/191 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN++ +IV D PGVTRDR+Y + W HEF ++DTGG
Sbjct: 4 PIVAVVGRPNVGKSTLFNQIGKKRVSIVDDMPGVTRDRIYLDAEWLTHEFTIIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I + + M S QA A+EE+ VI+FLVDG+
Sbjct: 61 ----------------------IEFDESDHILRSMRS----QAELAMEEADVILFLVDGR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
+GLT +DEE+A LR+ K +ILAVNK +S + + + +F+SLG P+PISA +
Sbjct: 95 SGLTTSDEEVARLLRRT--KKPVILAVNKIDSFEREAL-IYDFYSLGLGDPIPISASNAM 151
Query: 343 GTGELLDLVCS 353
G+LLD V +
Sbjct: 152 NLGDLLDAVVA 162
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 73/149 (48%), Gaps = 29/149 (19%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+A+VGRPNVGKS+L NRL+G R IV D PG TRD + +++L+DT G+
Sbjct: 179 IAVVGRPNVGKSSLVNRLLGEERVIVSDVPGTTRDAIDTHFTKDGAKYLLIDTAGMRRKG 238
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
K I L +V R + AI+ + V++ +++ G
Sbjct: 239 K-------------------ITLPVERYSVMR--------SLRAIDRAGVVLMVINAAEG 271
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCE 314
+ D +IA ++ ++ K +I+ VNK +
Sbjct: 272 ILEQDTKIAGYVHES--GKGVIIVVNKWD 298
>gi|37999702|sp|Q8G6A8.1|DER_BIFLO RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|23325955|gb|AAN24555.1| probable GTP binding protein [Bifidobacterium longum NCC2705]
Length = 463
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 116/231 (50%), Gaps = 37/231 (16%)
Query: 136 DETDDRKDSGKKQKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEP 195
DE D+ SG+ + G P +L A+VGRPNVGKS+L NR++G A+V D P
Sbjct: 2 DEGDEDLISGRGFTEGARKAGPKPVGVL---AVVGRPNVGKSSLVNRILGRRAAVVEDTP 58
Query: 196 GVTRDRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAV 255
GVTRDR+ + W +F LVDTGG EA V
Sbjct: 59 GVTRDRVSYDAEWAGTDFKLVDTGGW------------------------------EADV 88
Query: 256 ARMPSMIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCES 315
+ S I QA A+ + ++F+VDGQ G+T DE I LR K ++LAVNK +
Sbjct: 89 EGIESAIASQAQVAVTLADAVVFVVDGQVGMTTTDERIVKMLRA--AGKPVVLAVNKIDD 146
Query: 316 PRKGIMQVSEFWSLGFS-PLPISAISGTGTGELLDLVCSELKKVEVCIGFL 365
+ +EFW LG P ISA+ G G G+LLD+ +LK+ E G+L
Sbjct: 147 QASEYL-AAEFWKLGLGEPYSISAMHGRGVGDLLDVALDKLKQAEKTSGYL 196
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 44/75 (58%)
Query: 147 KQKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRS 206
K K+ + T G + L RVA+VGRPNVGKS+L N+L RA+V D G TRD +
Sbjct: 185 KLKQAEKTSGYLTPSGLRRVALVGRPNVGKSSLLNQLAREERAVVNDLAGTTRDPVDEIV 244
Query: 207 FWGEHEFMLVDTGGV 221
+++ +DT G+
Sbjct: 245 NIDGEDWLFIDTAGI 259
>gi|403515138|ref|YP_006655958.1| GTP-binding protein Der [Lactobacillus helveticus R0052]
gi|403080576|gb|AFR22154.1| GTP-binding protein Der [Lactobacillus helveticus R0052]
Length = 435
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 107/194 (55%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVG+PNVGKS LFNR++ AIV D+PGVTRDR Y ++ W H+F L+DTGG
Sbjct: 3 LPVVAIVGQPNVGKSTLFNRIINQRLAIVEDKPGVTRDRNYAQAEWMGHKFDLIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I EG ++ I QA AIEE+ VI+ L +
Sbjct: 61 ------------------ITWEG----------GKIEEEIRAQAEIAIEEADVIVMLTNV 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+T DE IA L + K +ILAVNK ++P + + +F+SLG P+P+S+ G
Sbjct: 93 VNHVTDLDERIAHLLYRT--KKPVILAVNKADNPEQR-NDIYDFYSLGLGDPIPVSSSHG 149
Query: 342 TGTGELLDLVCSEL 355
TG G+LLD + S+
Sbjct: 150 TGIGDLLDEIVSDF 163
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 99/201 (49%), Gaps = 42/201 (20%)
Query: 167 AIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSK 226
+++GRPNVGKS++ N+L+G +R IV +E G TRD + +F +VDT G+ +
Sbjct: 178 SVIGRPNVGKSSIVNKLLGEDRVIVANEEGTTRDAVDTPFTKDGVKFKVVDTAGI----R 233
Query: 227 SQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGL 286
+ + E T + +V R A AAIE S V++ ++D G+
Sbjct: 234 RRGKVYE---------------KTEKYSVLR--------AMAAIERSDVVLLVLDASTGI 270
Query: 287 TAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSP-LPIS 337
D+ +A + + + II+ VNK + P+K +EF L ++P L +S
Sbjct: 271 REQDKHVAGYAHET--GRGIIIVVNKWDLPKKNSTSAKEFEREIRAEFQYLDYAPILFVS 328
Query: 338 AISGTGTGELLDLVCSELKKV 358
A TG+ LD + S +K+V
Sbjct: 329 A----KTGQRLDQIPSMVKEV 345
>gi|227879096|ref|ZP_03996985.1| GTP-binding protein EngA [Lactobacillus crispatus JV-V01]
gi|256843085|ref|ZP_05548573.1| ribosome-associated GTPase EngA [Lactobacillus crispatus 125-2-CHN]
gi|256850263|ref|ZP_05555692.1| phosphoglycerate dehydrogenase [Lactobacillus crispatus MV-1A-US]
gi|262046345|ref|ZP_06019307.1| ribosome-associated GTPase EngA [Lactobacillus crispatus MV-3A-US]
gi|293379768|ref|ZP_06625900.1| ribosome-associated GTPase EngA [Lactobacillus crispatus 214-1]
gi|312977269|ref|ZP_07789017.1| ribosome-associated GTPase EngA [Lactobacillus crispatus CTV-05]
gi|423318777|ref|ZP_17296654.1| GTPase Der [Lactobacillus crispatus FB049-03]
gi|227861337|gb|EEJ68967.1| GTP-binding protein EngA [Lactobacillus crispatus JV-V01]
gi|256614505|gb|EEU19706.1| ribosome-associated GTPase EngA [Lactobacillus crispatus 125-2-CHN]
gi|256712900|gb|EEU27892.1| phosphoglycerate dehydrogenase [Lactobacillus crispatus MV-1A-US]
gi|260573216|gb|EEX29774.1| ribosome-associated GTPase EngA [Lactobacillus crispatus MV-3A-US]
gi|290923677|gb|EFE00548.1| ribosome-associated GTPase EngA [Lactobacillus crispatus 214-1]
gi|310895700|gb|EFQ44766.1| ribosome-associated GTPase EngA [Lactobacillus crispatus CTV-05]
gi|405591864|gb|EKB65323.1| GTPase Der [Lactobacillus crispatus FB049-03]
Length = 435
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 108/195 (55%), Gaps = 34/195 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVG+PNVGKS LFNR++ AIV D+PGVTRDR Y ++ W H+F L+DTGG
Sbjct: 2 VLPVVAIVGQPNVGKSTLFNRIINQRLAIVEDKPGVTRDRNYAQAEWMGHKFDLIDTGG- 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
I EG ++ I QA AIEE+ VI+ L +
Sbjct: 61 -------------------ITWEG----------GKIEEEIRAQAEIAIEEADVIVMLTN 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
+T DE IA L + K +ILAVNK ++P + + +F+SLG P+P+S+
Sbjct: 92 VVNHVTDLDERIAHLLYRT--KKPVILAVNKADNPEQR-SDIYDFYSLGLGDPIPVSSSH 148
Query: 341 GTGTGELLDLVCSEL 355
GTG G+LLD + ++
Sbjct: 149 GTGIGDLLDQIVNDF 163
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 98/201 (48%), Gaps = 42/201 (20%)
Query: 167 AIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSK 226
+++GRPNVGKS++ N+L+G +R IV +E G TRD + +F +VDT G+ +
Sbjct: 178 SVIGRPNVGKSSIVNKLLGEDRVIVANEEGTTRDAVDTPFTHDGVKFKVVDTAGI----R 233
Query: 227 SQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGL 286
+ + E T + +V R A +AIE S V++ ++D G+
Sbjct: 234 RRGKVYE---------------KTEKYSVMR--------AMSAIERSDVVLLVLDASTGI 270
Query: 287 TAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSP-LPIS 337
D+ +A + + + II+ VNK + P+K EF L ++P L +S
Sbjct: 271 REQDKHVAGYAHE--AGRGIIIVVNKWDLPKKNSTSAKEFEREIRDEFQYLDYAPILFVS 328
Query: 338 AISGTGTGELLDLVCSELKKV 358
A TG+ LD + + +K+V
Sbjct: 329 A----KTGQRLDQIPNMVKEV 345
>gi|451982382|ref|ZP_21930698.1| GTPase Der [Nitrospina gracilis 3/211]
gi|451760388|emb|CCQ91985.1| GTPase Der [Nitrospina gracilis 3/211]
Length = 443
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/195 (40%), Positives = 108/195 (55%), Gaps = 33/195 (16%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGR NVGKS LFNR+ AIV D PGVTRDRMY ++ W FM++DTGG+
Sbjct: 1 MLPHVAIVGRANVGKSTLFNRITRSRSAIVYDMPGVTRDRMYSQAEWNGKSFMVIDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
DLA G I L RE Q AI E+ VIIF+VD
Sbjct: 61 ------------DLA-----GDNSIELQVRE------------QGELAIREADVIIFVVD 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
GQ G+ D+E+ + LR++ K + LAVNK + P + ++++F+ LG +PIS+
Sbjct: 92 GQQGVLPQDQEVVELLRRS--GKPLFLAVNKIDDPVHEV-RITDFYELGVRFTIPISSEH 148
Query: 341 GTGTGELLDLVCSEL 355
G +L+D V ++
Sbjct: 149 DIGISDLMDRVTEKM 163
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 73/148 (49%), Gaps = 29/148 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
RVAIVG+PN GKS++ NRL+ +R IV + PG TRD + + + F+L+DT G+
Sbjct: 181 RVAIVGKPNAGKSSIINRLLNSDRCIVSEIPGTTRDTVDLPLEYEGNSFVLMDTAGIRRK 240
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K++ ++E ++ A A+E V + ++DG
Sbjct: 241 GKTR-KVVEKFSVI--------------------------MALKALERCDVAVLVIDGAE 273
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK 312
G++ D IA + + K ++LAVNK
Sbjct: 274 GVSEQDATIAGYAFER--GKALLLAVNK 299
>gi|399053691|ref|ZP_10742490.1| ribosome-associated GTPase EngA [Brevibacillus sp. CF112]
gi|433544583|ref|ZP_20500963.1| GTP-binding protein EngA [Brevibacillus agri BAB-2500]
gi|398048468|gb|EJL40940.1| ribosome-associated GTPase EngA [Brevibacillus sp. CF112]
gi|432184162|gb|ELK41683.1| GTP-binding protein EngA [Brevibacillus agri BAB-2500]
Length = 437
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 103/194 (53%), Gaps = 33/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS +FNRLVG AIV D PGVTRDR+YG+ W H F ++DTGG
Sbjct: 3 LPVVAIVGRPNVGKSTIFNRLVGERIAIVEDMPGVTRDRLYGKGEWLTHTFHVIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I + + +M QA AI+E+ VII + D
Sbjct: 61 -----------------------IEFGETDEILTQM----RYQAELAIDEANVIIMIADS 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T AD E+A L N K ++LAVNK ++P + +F+SLG P PIS G
Sbjct: 94 RTGVTDADVELARML--NRTGKPVVLAVNKADNPDMR-ADIYDFYSLGLGEPFPISGSHG 150
Query: 342 TGTGELLDLVCSEL 355
G G++L+ V
Sbjct: 151 LGLGDMLEEVVRHF 164
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 81/165 (49%), Gaps = 29/165 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
RV+I+GRPNVGKS+L N L+G R IV D G TRD + ++LVDT G+
Sbjct: 178 RVSIIGRPNVGKSSLTNALLGEERVIVSDVAGTTRDAIDTPFERDGQSYVLVDTAGM--- 234
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E T + +V R A +IE+S V++ +++G+
Sbjct: 235 -RKRGKVYE---------------TTEKYSVMR--------AMRSIEDSDVVLVVINGEE 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSL 329
G+ D++IA + + + +I+ VNK ++ K + F L
Sbjct: 271 GIIEQDKKIAGYAHE--AGRGVIIIVNKWDAVEKDDKTMRRFTEL 313
>gi|161507460|ref|YP_001577414.1| GTP-binding protein EngA [Lactobacillus helveticus DPC 4571]
gi|260101628|ref|ZP_05751865.1| ribosome-associated GTPase EngA [Lactobacillus helveticus DSM
20075]
gi|172048280|sp|A8YV35.1|DER_LACH4 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|160348449|gb|ABX27123.1| phosphoglycerate dehydrogenase [Lactobacillus helveticus DPC 4571]
gi|260084561|gb|EEW68681.1| ribosome-associated GTPase EngA [Lactobacillus helveticus DSM
20075]
Length = 435
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 107/194 (55%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVG+PNVGKS LFNR++ AIV D+PGVTRDR Y ++ W H+F L+DTGG
Sbjct: 3 LPVVAIVGQPNVGKSTLFNRIINQRLAIVEDKPGVTRDRNYAQAEWMGHKFDLIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I EG ++ I QA AIEE+ VI+ L +
Sbjct: 61 ------------------ITWEG----------GKIEEEIRAQAEIAIEEADVIVMLTNV 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+T DE IA L + K +ILAVNK ++P + + +F+SLG P+P+S+ G
Sbjct: 93 VNHVTDLDERIAHLLYRT--KKPVILAVNKADNPEQR-NDIYDFYSLGLGDPIPVSSSHG 149
Query: 342 TGTGELLDLVCSEL 355
TG G+LLD + S+
Sbjct: 150 TGIGDLLDEIVSDF 163
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 99/201 (49%), Gaps = 42/201 (20%)
Query: 167 AIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSK 226
+++GRPNVGKS++ N+L+G +R IV +E G TRD + +F +VDT G+ +
Sbjct: 178 SVIGRPNVGKSSIVNKLLGEDRVIVANEEGTTRDAVDTPFTKDGVKFKVVDTAGI----R 233
Query: 227 SQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGL 286
+ + E T + +V R A AAIE S V++ ++D G+
Sbjct: 234 RRGKVYE---------------KTEKYSVLR--------AVAAIERSDVVLLVLDASTGI 270
Query: 287 TAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSP-LPIS 337
D+ +A + + + II+ VNK + P+K +EF L ++P L +S
Sbjct: 271 REQDKHVAGYAHE--AGRGIIIVVNKWDLPKKNSTSAKEFEREIRAEFQYLDYAPILFVS 328
Query: 338 AISGTGTGELLDLVCSELKKV 358
A TG+ LD + S +K+V
Sbjct: 329 A----KTGQRLDQIPSMVKEV 345
>gi|333378546|ref|ZP_08470277.1| GTP-binding protein engA [Dysgonomonas mossii DSM 22836]
gi|332883522|gb|EGK03805.1| GTP-binding protein engA [Dysgonomonas mossii DSM 22836]
Length = 468
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/213 (39%), Positives = 118/213 (55%), Gaps = 42/213 (19%)
Query: 147 KQKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRS 206
K + + T +GN+ VAIVGRPNVGKS LFNRL +AIV + G TRDR YG+
Sbjct: 24 KFRVQYTNMGNL-------VAIVGRPNVGKSTLFNRLTESRQAIVDETSGTTRDRQYGKV 76
Query: 207 FWGEHEFMLVDTGG-VLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQ 265
WG +F LVDTGG V+N ED+ + I +Q
Sbjct: 77 EWGGQDFSLVDTGGWVVN--------SEDV----------------------FENEINKQ 106
Query: 266 ATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSE 325
AIEE+ VI+F+VD GLT D +A+ LR++ K I+L NK ++ Q +E
Sbjct: 107 VAIAIEEADVILFMVDVMNGLTDLDSSVANMLRRS--KKPILLVSNKADNFNLH-AQSAE 163
Query: 326 FWSLGFS-PLPISAISGTGTGELLDLVCSELKK 357
F++LG P+ ISAI+G+GTG+LLD++ ++ K
Sbjct: 164 FYALGLGDPINISAINGSGTGDLLDVIITKFTK 196
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 77/157 (49%), Gaps = 31/157 (19%)
Query: 160 EHL--LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVD 217
EHL +PR+AIVGRPN GKS+L N L+ R IV + G TRD +Y R +F LVD
Sbjct: 201 EHLEDIPRIAIVGRPNAGKSSLVNALMDEERNIVTNIAGTTRDSIYTRFDKFNLDFYLVD 260
Query: 218 TGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVII 277
T G+ + + + EDL + I ++ AIE S V +
Sbjct: 261 TAGI----RKKGKVTEDLEYYSVI-----------------------RSIKAIENSDVCV 293
Query: 278 FLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
++D G+ + D I ++KN K +++ VNK +
Sbjct: 294 LMIDATQGIESQDMNIFSLIQKN--RKGLVVCVNKWD 328
>gi|423321586|ref|ZP_17299457.1| GTPase Der [Lactobacillus crispatus FB077-07]
gi|405594275|gb|EKB67692.1| GTPase Der [Lactobacillus crispatus FB077-07]
Length = 435
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 108/195 (55%), Gaps = 34/195 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVG+PNVGKS LFNR++ AIV D+PGVTRDR Y ++ W H+F L+DTGG
Sbjct: 2 VLPVVAIVGQPNVGKSTLFNRIINQRLAIVEDKPGVTRDRNYAQAEWMGHKFDLIDTGG- 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
I EG ++ I QA AIEE+ VI+ L +
Sbjct: 61 -------------------ITWEG----------GKIEEEIRAQAEIAIEEADVIVMLTN 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
+T DE IA L + K +ILAVNK ++P + + +F+SLG P+P+S+
Sbjct: 92 VVNHVTDLDERIAHLLYRT--KKPVILAVNKADNPEQR-SDIYDFYSLGLGDPIPVSSSH 148
Query: 341 GTGTGELLDLVCSEL 355
GTG G+LLD + ++
Sbjct: 149 GTGIGDLLDQIVNDF 163
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 97/201 (48%), Gaps = 42/201 (20%)
Query: 167 AIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSK 226
+++GRPNVGKS++ N+L+G +R IV +E G TRD + +F +VDT G+ +
Sbjct: 178 SVIGRPNVGKSSIVNKLLGEDRVIVANEEGTTRDAVDTPFTHDGVKFKVVDTAGI----R 233
Query: 227 SQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGL 286
+ + E T + +V R A +AIE S V+ ++D G+
Sbjct: 234 RRGKVYE---------------KTEKYSVMR--------AMSAIERSDVVFLVLDASTGI 270
Query: 287 TAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSP-LPIS 337
D+ +A + + + II+ VNK + P+K EF L ++P L +S
Sbjct: 271 REQDKHVAGYAHE--AGRGIIIVVNKWDLPKKNSTSAKEFEREIRDEFQYLDYAPILFVS 328
Query: 338 AISGTGTGELLDLVCSELKKV 358
A TG+ LD + + +K+V
Sbjct: 329 A----KTGQRLDQIPNMVKEV 345
>gi|385813937|ref|YP_005850330.1| GTP-binding protein engA [Lactobacillus helveticus H10]
gi|323466656|gb|ADX70343.1| GTP-binding protein engA [Lactobacillus helveticus H10]
Length = 435
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 107/194 (55%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVG+PNVGKS LFNR++ AIV D+PGVTRDR Y ++ W H+F L+DTGG
Sbjct: 3 LPVVAIVGQPNVGKSTLFNRIINQRLAIVEDKPGVTRDRNYAQAEWMGHKFDLIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I EG ++ I QA AIEE+ VI+ L +
Sbjct: 61 ------------------ITWEG----------GKIEEEIRAQAEIAIEEADVIVMLTNV 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+T DE IA L + K +ILAVNK ++P + + +F+SLG P+P+S+ G
Sbjct: 93 VNHVTDLDERIAHLLYRT--KKPVILAVNKADNPEQR-NDIYDFYSLGLGDPIPVSSSHG 149
Query: 342 TGTGELLDLVCSEL 355
TG G+LLD + S+
Sbjct: 150 TGIGDLLDEIVSDF 163
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 99/201 (49%), Gaps = 42/201 (20%)
Query: 167 AIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSK 226
+++GRPNVGKS++ N+L+G +R IV +E G TRD + +F +VDT G+ +
Sbjct: 178 SVIGRPNVGKSSVVNKLLGEDRVIVANEEGTTRDAVDTPFTKDGVKFKVVDTAGI----R 233
Query: 227 SQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGL 286
+ + E T + +V R A AAIE S V++ ++D G+
Sbjct: 234 RRGKVYE---------------KTEKYSVLR--------AVAAIERSDVVLLVLDASTGI 270
Query: 287 TAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSP-LPIS 337
D+ +A + + + II+ VNK + P+K +EF L ++P L +S
Sbjct: 271 REQDKHVAGYAHE--AGRGIIIVVNKWDLPKKNSTSAKEFEREIRAEFQYLDYAPILFVS 328
Query: 338 AISGTGTGELLDLVCSELKKV 358
A TG+ LD + S +K+V
Sbjct: 329 A----KTGQRLDQIPSMVKEV 345
>gi|295106000|emb|CBL03543.1| ribosome-associated GTPase EngA [Gordonibacter pamelaeae 7-10-1-b]
Length = 438
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 80/199 (40%), Positives = 107/199 (53%), Gaps = 33/199 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA+VGRPNVGKS NR+ + AIV + GVTRDR Y + W EF LVDTGG+
Sbjct: 3 LPLVAVVGRPNVGKSTFVNRIAQADEAIVHEMRGVTRDRSYHEADWNGVEFKLVDTGGI- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D A +I QA A E+ V+IF+VDG
Sbjct: 62 -------EMGDDDAFQGSI---------------------RAQAIAGANEADVVIFIVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+ A DE +A LRK K + L VNK ++P + ++ EF+ LG P P+S+ G
Sbjct: 94 KTGINADDEAVARILRK--AGKPVFLVVNKMDTPNR-TDELWEFYQLGVGDPWPVSSTHG 150
Query: 342 TGTGELLDLVCSELKKVEV 360
GTG+LLD V EL++ EV
Sbjct: 151 HGTGDLLDAVVEELRRAEV 169
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 87/189 (46%), Gaps = 47/189 (24%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHE---FMLVDTGGVL 222
VAI+GRPN GKS+L N++ G+R+IV D G TRD + EH+ + +VDT G+
Sbjct: 181 VAIIGRPNAGKSSLTNKMTKGDRSIVSDVAGTTRDAIDTAV---EHDGTLYTIVDTAGLR 237
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
KSQ I + G A R AI+ + V + ++D
Sbjct: 238 R--KSQ--------IDQDVEYYGFVRAMR-----------------AIDRADVALLVIDS 270
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNK---CESP------RKGIMQVSEFWSLGFSP 333
GLT D+ +A + + I+L NK E P R+ I F +G++P
Sbjct: 271 TLGLTDQDQRVAGYAAERGCAMVIVL--NKWDLVEGPEAKADIRERIADRMTF--VGYAP 326
Query: 334 -LPISAISG 341
+ ISA++G
Sbjct: 327 VVAISALTG 335
>gi|170017042|ref|YP_001727961.1| GTP-binding protein EngA [Leuconostoc citreum KM20]
gi|421876350|ref|ZP_16307908.1| GTPase Der [Leuconostoc citreum LBAE C10]
gi|421878100|ref|ZP_16309583.1| GTPase Der [Leuconostoc citreum LBAE C11]
gi|238688961|sp|B1MYB5.1|DER_LEUCK RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|169803899|gb|ACA82517.1| GTP-binding protein engA [Leuconostoc citreum KM20]
gi|372557871|emb|CCF24028.1| GTPase Der [Leuconostoc citreum LBAE C10]
gi|390447975|emb|CCF25703.1| GTPase Der [Leuconostoc citreum LBAE C11]
Length = 437
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 104/193 (53%), Gaps = 34/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+ G AIV D+PGVTRDR+Y + W +EF ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRMAGERIAIVEDKPGVTRDRLYAPAEWLNYEFRMIDTGGIE- 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P + E I Q AI+E+ VI+ + G+
Sbjct: 63 -LGDEPFLAE----------------------------IRAQVELAIDEADVIVMVASGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGT 342
G+TAADE +A L K DK +ILAVNK ++P + +F+SLG L P+S G
Sbjct: 94 EGVTAADEVVAKMLYKT--DKPVILAVNKVDNPEMR-QDIYDFYSLGLGDLFPVSGSHGL 150
Query: 343 GTGELLDLVCSEL 355
G G+LLD V
Sbjct: 151 GLGDLLDAVVKHF 163
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 37/202 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
R +I+GRPNVGKS++ N ++G +R IV D G TRD + R E EF++VDT G+
Sbjct: 177 RFSIIGRPNVGKSSIVNAMLGEDRVIVSDIEGTTRDAIDSRFVTAEGDEFIMVDTAGMRK 236
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S VI+ ++D +
Sbjct: 237 RGKVYEN-------------------TEKYSVMR--------ALKAIDNSNVILMVLDAE 269
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL------PIS 337
AG+ D+ +A + + +I+ VNK ++ K + EF +L S PI
Sbjct: 270 AGIREQDKHVAGFAHD--AGRAMIIIVNKWDAIEKDGHTMKEFENLIRSEFKFLDYAPIM 327
Query: 338 AISGTGTGELLDLVCSELKKVE 359
+S TG+ LD + +K V+
Sbjct: 328 FVSAK-TGQRLDRIPQLVKDVD 348
>gi|295692881|ref|YP_003601491.1| GTP-binding protein enga [Lactobacillus crispatus ST1]
gi|295030987|emb|CBL50466.1| GTP-binding protein engA [Lactobacillus crispatus ST1]
Length = 435
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 108/195 (55%), Gaps = 34/195 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVG+PNVGKS LFNR++ AIV D+PGVTRDR Y ++ W H+F L+DTGG
Sbjct: 2 VLPVVAIVGQPNVGKSTLFNRIINQRLAIVEDKPGVTRDRNYAQAEWMGHKFDLIDTGG- 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
I EG ++ I QA AIEE+ VI+ L +
Sbjct: 61 -------------------ITWEG----------GKIEEEIRAQAEIAIEEADVIVMLTN 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
+T DE IA L + K +ILAVNK ++P + + +F+SLG P+P+S+
Sbjct: 92 VVNHVTDLDERIAHLLYRT--KKPVILAVNKADNPEQR-SDIYDFYSLGLGDPIPVSSSH 148
Query: 341 GTGTGELLDLVCSEL 355
GTG G+LLD + ++
Sbjct: 149 GTGIGDLLDQIVNDF 163
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 98/201 (48%), Gaps = 42/201 (20%)
Query: 167 AIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSK 226
+++GRPNVGKS++ N+L+G +R IV +E G TRD + +F +VDT G+ +
Sbjct: 178 SVIGRPNVGKSSIVNKLLGEDRVIVANEEGTTRDAVDTPFTHDGVKFKVVDTAGI----R 233
Query: 227 SQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGL 286
+ + E T + +V R A +AIE S V++ ++D G+
Sbjct: 234 RRGKVYE---------------KTEKYSVMR--------AMSAIERSDVVLLVIDASTGI 270
Query: 287 TAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSP-LPIS 337
D+ +A + + + II+ VNK + P+K EF L ++P L +S
Sbjct: 271 REQDKHVAGYAHE--AGRGIIIVVNKWDLPKKNSTSAKEFEREIRDEFQYLDYAPILFVS 328
Query: 338 AISGTGTGELLDLVCSELKKV 358
A TG+ LD + + +K+V
Sbjct: 329 A----KTGQRLDQIPNMVKEV 345
>gi|71027773|ref|XP_763530.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350483|gb|EAN31247.1| GTP-binding protein, putative [Theileria parva]
Length = 521
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 81/203 (39%), Positives = 105/203 (51%), Gaps = 40/203 (19%)
Query: 159 PEHLLPR---VAIVGRPNVGKSALFNRLVG--GNRAIVVDEPGVTRDRMYGRSFWGEHEF 213
PE+L + V+IVGRPNVGKS++FNR+ ++V D PG TRDR Y + W F
Sbjct: 55 PENLKVKNRIVSIVGRPNVGKSSIFNRITKLFHYGSVVNDAPGTTRDRQYSIADWNGKYF 114
Query: 214 MLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEES 273
++DTGG + L + E I+ Q AI+ES
Sbjct: 115 RIIDTGG----------------------YDDDQLYSDE---------IKSQINTAIKES 143
Query: 274 CVIIFLVDGQAGLTAADEEIADWL---RKNYMDKFIILAVNKCESPRKGIMQVSEFWSLG 330
IIF+VD GLT+ D EI D+L K D I+L VNK ES R+G + EFW LG
Sbjct: 144 SKIIFVVDALEGLTSMDYEIRDYLFKHTKKRRDLEILLCVNKAESYRRGDILAQEFWKLG 203
Query: 331 F-SPLPISAISGTGTGELLDLVC 352
+P P+SA+ GTG ELLD C
Sbjct: 204 LGTPYPVSALHGTGLAELLDKYC 226
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 32/143 (22%)
Query: 172 PNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNI 231
PN GKS+L N+L+G NR IV + G T+D +GE + VDT
Sbjct: 247 PNSGKSSLINKLIGENRCIVSPDEGTTQDSTKVFVTYGE-KMSFVDTA------------ 293
Query: 232 MEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGLTAADE 291
G+ L T++ R + ++ + +I S V I ++D G++ D
Sbjct: 294 -------------GMKLLTKD----RRSYLSQKSSLKSIRASDVCILVIDSSWGISKNDV 336
Query: 292 EIADWLRKNYMDKFIILAVNKCE 314
++A+ ++ +K I+ NK +
Sbjct: 337 KMAEEIKDE--NKAAIIVCNKWD 357
>gi|350546619|ref|ZP_08915997.1| GTP-binding protein Der [Mycoplasma iowae 695]
gi|349503857|gb|EGZ31422.1| GTP-binding protein Der [Mycoplasma iowae 695]
Length = 443
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 102/189 (53%), Gaps = 32/189 (16%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVG+PNVGKS LFNR+V N++IV D PGVTRDR+Y ++ W F L+DTGG+
Sbjct: 4 VAIVGKPNVGKSTLFNRIVKKNKSIVDDTPGVTRDRIYCQAEWLTRNFYLIDTGGLT--- 60
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
++D + IE Q AIEE+ VIIFL+ + G
Sbjct: 61 ------VKDFS---------------------FKKEIELQVNYAIEEASVIIFLISAKDG 93
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGTGT 344
+ D+ +A L+K +K IIL VNK ES + ++++ GF P IS+ G G
Sbjct: 94 INNDDQYVAKLLKKYAKNKKIILVVNKSESKNSSKNE-NDYYKFGFGKPFFISSSHGIGI 152
Query: 345 GELLDLVCS 353
G+LLD + S
Sbjct: 153 GDLLDQIIS 161
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 76/162 (46%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+ I+G+PNVGKS+L N ++ +R IV D G T D + + F ++DT G+
Sbjct: 174 KFCIIGKPNVGKSSLVNCILRQDRVIVSDIAGTTLDAIDTNFKRNKEMFTIIDTAGIRKK 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK IG EG+ + A R+ I+R S +II L+DG +
Sbjct: 234 SK--------------IG-EGL----EKYAFLRVEQSIKR--------SNLIIVLLDGSS 266
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
T DE IA K + I+AVNK ++ K +++F
Sbjct: 267 DFTEQDEIIAGLAFKANIP--CIIAVNKWDAVNKDEKTMNQF 306
>gi|376294861|ref|YP_005166091.1| ribosome-associated GTPase EngA [Desulfovibrio desulfuricans ND132]
gi|323457422|gb|EGB13287.1| ribosome-associated GTPase EngA [Desulfovibrio desulfuricans ND132]
Length = 505
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 104/190 (54%), Gaps = 25/190 (13%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VA+VGRPNVGKS LFNRL+ +R+I D PGVTRDR+YG GE F LVDTGG+
Sbjct: 1 MLPIVALVGRPNVGKSTLFNRLLRKSRSITHDLPGVTRDRIYGECIMGETRFDLVDTGGM 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ S++ P + +D I QA AI E+ I+F+VD
Sbjct: 61 VLESEATPELSKDFE-----------------------DEIFEQAQEAINEANAIVFVVD 97
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLPISAISG 341
G+ GLT D + A+++R++ K +++ +NK + +EF LG LP+SA G
Sbjct: 98 GKEGLTPLDRQAAEFVRRS--GKPVLMLINKVDGSEFEAHMTAEFHELGIEFLPVSAAHG 155
Query: 342 TGTGELLDLV 351
E+ D V
Sbjct: 156 YNLHEVRDRV 165
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 89/206 (43%), Gaps = 36/206 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R+ ++GRPN GKS++ N L+G +R IV D G TRD + G + VDT GV
Sbjct: 187 RLTMLGRPNAGKSSIINALIGKDRLIVSDVAGTTRDSIDVTFEKGGKRYTFVDTAGV--- 243
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + NI + L + I +A + S V + +D
Sbjct: 244 -RKRANIQDHLEKISVI-----------------------RALKNSKRSDVTVLTIDITL 279
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCE-SPRKGIMQVSEFWSLGFSPLP------IS 337
G+ D+ + ++L K ++ VNK + PR + E + +P S
Sbjct: 280 GVGRQDKRLIEFLAKEKTP--FMVVVNKADLIPRSETNRALEAFREELRLVPHVPVVMTS 337
Query: 338 AISGTGTGELLDLVCSELKKVEVCIG 363
A+ G G G+LL L + K+ ++ +G
Sbjct: 338 AVKGLGIGKLLPLAETMRKECDIRVG 363
>gi|227893492|ref|ZP_04011297.1| GTP-binding protein EngA [Lactobacillus ultunensis DSM 16047]
gi|227864717|gb|EEJ72138.1| GTP-binding protein EngA [Lactobacillus ultunensis DSM 16047]
Length = 435
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 106/195 (54%), Gaps = 34/195 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR++ AIV D+PGVTRDR Y ++ W H+F L+DTGG
Sbjct: 2 VLPVVAIVGRPNVGKSTLFNRIINQRLAIVEDKPGVTRDRNYAQAEWMGHKFDLIDTGG- 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
I EG ++ I QA AIEE+ VI+ L
Sbjct: 61 -------------------ITWEG----------GKIEEEIRAQAEIAIEEADVIVMLTS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
+T DE +A L + K +ILAVNK ++P + + +F+SLG P+P+S+
Sbjct: 92 VVNHMTDLDERVAHLLYRT--KKPVILAVNKADNPEQR-NDIYDFYSLGLGDPIPVSSSH 148
Query: 341 GTGTGELLDLVCSEL 355
GTG G+LLD + +
Sbjct: 149 GTGIGDLLDEIVNNF 163
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 98/201 (48%), Gaps = 42/201 (20%)
Query: 167 AIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSK 226
+++GRPNVGKS++ N+L+G +R IV +E G TRD + ++ +VDT G+ +
Sbjct: 178 SVIGRPNVGKSSIVNKLLGEDRVIVANEEGTTRDAVDTPFTKNGVKYKVVDTAGI----R 233
Query: 227 SQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGL 286
+ + E T + +V R A +AIE S V++ ++D G+
Sbjct: 234 RRGKVYE---------------KTEKYSVLR--------AMSAIERSDVVLLVLDASTGI 270
Query: 287 TAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSP-LPIS 337
D+ +A + + + II+ VNK + +K +EF L ++P L +S
Sbjct: 271 REQDKHVAGYAHE--AGRGIIIVVNKWDLLKKNSTSAKEFEREIRAEFQYLDYAPILFVS 328
Query: 338 AISGTGTGELLDLVCSELKKV 358
A TG+ LD + + +K+V
Sbjct: 329 A----KTGQRLDQIPTLVKEV 345
>gi|414596443|ref|ZP_11446018.1| GTPase Der [Leuconostoc citreum LBAE E16]
gi|390482905|emb|CCF28079.1| GTPase Der [Leuconostoc citreum LBAE E16]
Length = 437
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 104/193 (53%), Gaps = 34/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+ G AIV D+PGVTRDR+Y + W +EF ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRMAGERIAIVEDKPGVTRDRLYAPAEWLNYEFRMIDTGGIE- 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P + E I Q AI+E+ VI+ + G+
Sbjct: 63 -LGDEPFLAE----------------------------IRAQVELAIDEADVIVMVASGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGT 342
G+TAADE +A L K DK +ILAVNK ++P + +F+SLG L P+S G
Sbjct: 94 EGVTAADEVVAKMLYKT--DKPVILAVNKVDNPEMR-QDIYDFYSLGLGDLFPVSGSHGL 150
Query: 343 GTGELLDLVCSEL 355
G G+LLD V
Sbjct: 151 GLGDLLDAVVKHF 163
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 37/202 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
R +I+GRPNVGKS++ N ++G +R IV D G TRD + R E EF++VDT G+
Sbjct: 177 RFSIIGRPNVGKSSIVNAMLGEDRVIVSDIEGTTRDAIDSRFVTAEGDEFIMVDTAGMRK 236
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S VI+ ++D +
Sbjct: 237 RGKVYEN-------------------TEKYSVMR--------ALKAIDNSNVILMVLDAE 269
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL------PIS 337
AG+ D+ +A + + +I+ VNK ++ K + EF +L S PI
Sbjct: 270 AGIREQDKHVAGFAHD--AGRAMIIIVNKWDAIEKDGHTMKEFENLIRSEFKFLDYAPIM 327
Query: 338 AISGTGTGELLDLVCSELKKVE 359
+S TG+ LD + +K V+
Sbjct: 328 FVSAK-TGQRLDRIPQLVKDVD 348
>gi|374290408|ref|YP_005037461.1| GTP-binding protein EngA [Blattabacterium sp. (Cryptocercus
punctulatus) str. Cpu]
gi|358377200|gb|AEU09388.1| GTP-binding protein EngA [Blattabacterium sp. (Cryptocercus
punctulatus) str. Cpu]
Length = 441
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 81/194 (41%), Positives = 113/194 (58%), Gaps = 31/194 (15%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
V+IVGRPNVGKS LFNR++G +AIV + GVTRDR+YG S W +F +VDTGG
Sbjct: 5 VSIVGRPNVGKSTLFNRIIGKKKAIVHVKSGVTRDRIYGNSEWNGIQFSIVDTGGY---- 60
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+ PN D+ + + I +Q A++ES VI+FLVD + G
Sbjct: 61 -NPPNNNIDI----------------------IDTEIRKQILIALKESDVILFLVDMEIG 97
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLP-ISAISGTGT 344
L D EI+ LRK K I+L VNK ++ K + ++F+ LGF+ ISAI+G+GT
Sbjct: 98 LLDVDIEISKILRK--CKKSILLVVNKVDNG-KNLYHDTDFFRLGFNNYYCISAINGSGT 154
Query: 345 GELLDLVCSELKKV 358
GE+LD + LK++
Sbjct: 155 GEMLDRLIEILKEL 168
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 69/154 (44%), Gaps = 33/154 (21%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRM--YGRSFWGEHEFMLVDTGG 220
+PR +++GRPNVGKS L N + R IV + G TRD + + + F ++ +L DT G
Sbjct: 179 IPRFSVIGRPNVGKSTLINSFLDKYRHIVTNISGTTRDSIDVFYKKF--GYKCILFDTPG 236
Query: 221 VLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLV 280
V SK I E++ +T+ + I+ + + +V
Sbjct: 237 VRKKSK----ISENIEFYSTM-----------------------KTVRTIKYTDICFLMV 269
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
D G + D I + KN K +I+ +NK +
Sbjct: 270 DAVRGWESQDRNIFRLIEKN--QKGVIILINKWD 301
>gi|253999419|ref|YP_003051482.1| GTP-binding protein EngA [Methylovorus glucosetrophus SIP3-4]
gi|313201441|ref|YP_004040099.1| small GTP-binding protein [Methylovorus sp. MP688]
gi|253986098|gb|ACT50955.1| small GTP-binding protein [Methylovorus glucosetrophus SIP3-4]
gi|312440757|gb|ADQ84863.1| small GTP-binding protein [Methylovorus sp. MP688]
Length = 523
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/195 (38%), Positives = 110/195 (56%), Gaps = 33/195 (16%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP + +VGRPNVGKS LFNRL A+V D PG+TRDR YGR G+ F++VDTGG
Sbjct: 1 MLPTIVLVGRPNVGKSTLFNRLTKSRDALVADLPGLTRDRHYGRGIGGDKPFLVVDTGGF 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ S I++++A +Q AI+E+ V+IF+VD
Sbjct: 61 EPLVDS--GILKEMA---------------------------KQTLLAIDEADVVIFMVD 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ GL D+ IAD LRK+ + ++LAVNK E ++ I+ +EF LG PL IS+
Sbjct: 92 GRNGLAPQDKVIADRLRKS--QRPVLLAVNKTEGMQRAIVS-AEFHELGLGDPLSISSAH 148
Query: 341 GTGTGELLDLVCSEL 355
G G +L++L ++
Sbjct: 149 GEGVRDLVELALADF 163
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 73/152 (48%), Gaps = 29/152 (19%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P+VAIVGRPNVGKS L N L+G R I D+PG TRD ++ + ++DT GV
Sbjct: 178 PKVAIVGRPNVGKSTLVNALLGQERVIAFDQPGTTRDSIHIDLERNGKHYTIIDTAGVRK 237
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K I E ++ TI AIEE+ V I +VD Q
Sbjct: 238 RGKVFEAI-EKFSVIKTI--------------------------QAIEEANVAILVVDAQ 270
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCES 315
G+T D +A ++ + + +++A+NK +
Sbjct: 271 EGITEQDAHVAAYILE--AGRALVVAINKWDG 300
>gi|183601656|ref|ZP_02963026.1| bifunctional cytidylate kinase/GTP-binding protein [Bifidobacterium
animalis subsp. lactis HN019]
gi|241190845|ref|YP_002968239.1| bifunctional cytidylate kinase/GTP-binding protein [Bifidobacterium
animalis subsp. lactis Bl-04]
gi|241196251|ref|YP_002969806.1| bifunctional cytidylate kinase/GTP-binding protein [Bifidobacterium
animalis subsp. lactis DSM 10140]
gi|384191093|ref|YP_005576841.1| protein EngA [Bifidobacterium animalis subsp. lactis BB-12]
gi|384192238|ref|YP_005577985.1| hypothetical protein [Bifidobacterium animalis subsp. lactis CNCM
I-2494]
gi|384193839|ref|YP_005579585.1| bifunctional cytidylate kinase/GTP-binding protein [Bifidobacterium
animalis subsp. lactis BLC1]
gi|384195403|ref|YP_005581148.1| bifunctional cytidylate kinase/GTP-binding protein [Bifidobacterium
animalis subsp. lactis V9]
gi|387820712|ref|YP_006300755.1| GTP-binding protein EngA [Bifidobacterium animalis subsp. lactis
B420]
gi|387822386|ref|YP_006302335.1| GTP-binding protein EngA [Bifidobacterium animalis subsp. lactis
Bi-07]
gi|423679372|ref|ZP_17654248.1| bifunctional cytidylate kinase/GTPase Der [Bifidobacterium animalis
subsp. lactis BS 01]
gi|183219262|gb|EDT89903.1| bifunctional cytidylate kinase/GTP-binding protein [Bifidobacterium
animalis subsp. lactis HN019]
gi|240249237|gb|ACS46177.1| bifunctional cytidylate kinase/GTP-binding protein [Bifidobacterium
animalis subsp. lactis Bl-04]
gi|240250805|gb|ACS47744.1| bifunctional cytidylate kinase/GTP-binding protein [Bifidobacterium
animalis subsp. lactis DSM 10140]
gi|289178585|gb|ADC85831.1| EngA [Bifidobacterium animalis subsp. lactis BB-12]
gi|295793834|gb|ADG33369.1| bifunctional cytidylate kinase/GTP-binding protein [Bifidobacterium
animalis subsp. lactis V9]
gi|340364975|gb|AEK30266.1| hypothetical protein BALAC2494_00321 [Bifidobacterium animalis
subsp. lactis CNCM I-2494]
gi|345282698|gb|AEN76552.1| bifunctional cytidylate kinase/GTP-binding protein [Bifidobacterium
animalis subsp. lactis BLC1]
gi|366041483|gb|EHN17978.1| bifunctional cytidylate kinase/GTPase Der [Bifidobacterium animalis
subsp. lactis BS 01]
gi|386653413|gb|AFJ16543.1| GTP-binding protein EngA [Bifidobacterium animalis subsp. lactis
B420]
gi|386654994|gb|AFJ18123.1| GTP-binding protein EngA [Bifidobacterium animalis subsp. lactis
Bi-07]
Length = 710
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 80/201 (39%), Positives = 103/201 (51%), Gaps = 34/201 (16%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+A+VGRPNVGKS L NR++G A+V D PGVTRDR+ + W +F LVDTGG
Sbjct: 276 IAVVGRPNVGKSTLVNRILGRRAAVVEDTPGVTRDRVSYDAEWAGTDFKLVDTGGW---- 331
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
EA V + S I QA A+E + +IF+VD G
Sbjct: 332 --------------------------EADVEGIDSAIASQAQIAVELADSVIFVVDALTG 365
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
LT DE I LR+ K + +AVNK + M +EFW LG P PISA+ G G
Sbjct: 366 LTQTDERIVKLLRQ--AGKPVTVAVNKIDDQISEYM-AAEFWKLGLGEPYPISAMHGRGV 422
Query: 345 GELLDLVCSELKKVEVCIGFL 365
G+LLD +++K E GFL
Sbjct: 423 GDLLDEAVAQMKSAEKTSGFL 443
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 152 KTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEH 211
KT+ P HL RVA+VGRPNVGKS+L N+L R++V + G TRD +
Sbjct: 438 KTSGFLTPSHL-RRVALVGRPNVGKSSLLNQLSHSERSVVNELAGTTRDPVDEIVTIDGE 496
Query: 212 EFMLVDTGGV 221
+++ +DT G+
Sbjct: 497 DYLFIDTAGI 506
>gi|315038199|ref|YP_004031767.1| GTP-binding protein EngA [Lactobacillus amylovorus GRL 1112]
gi|325956651|ref|YP_004292063.1| GTP-binding protein Der [Lactobacillus acidophilus 30SC]
gi|385817538|ref|YP_005853928.1| GTP-binding protein Der [Lactobacillus amylovorus GRL1118]
gi|312276332|gb|ADQ58972.1| GTP-binding protein EngA [Lactobacillus amylovorus GRL 1112]
gi|325333216|gb|ADZ07124.1| GTP-binding protein Der [Lactobacillus acidophilus 30SC]
gi|327183476|gb|AEA31923.1| GTP-binding protein Der [Lactobacillus amylovorus GRL1118]
Length = 435
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 105/194 (54%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR++ AIV D+PGVTRDR Y ++ W H+F L+DTGG
Sbjct: 3 LPVVAIVGRPNVGKSTLFNRIINQRLAIVEDKPGVTRDRNYAQAEWMGHKFDLIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I EG ++ I QA AIEE+ VI+ L
Sbjct: 61 ------------------ITWEG----------GKIEEEIRAQAEIAIEEADVIVMLTSV 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+T DE +A L + K +ILAVNK ++P + + +F+SLG P+P+S+ G
Sbjct: 93 VNHMTDLDERVAHLLYRT--QKPVILAVNKADNPEQR-NDIYDFYSLGLGDPIPVSSSHG 149
Query: 342 TGTGELLDLVCSEL 355
TG G+LLD + +
Sbjct: 150 TGIGDLLDAIVDKF 163
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 96/201 (47%), Gaps = 42/201 (20%)
Query: 167 AIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSK 226
+++GRPNVGKS++ N+L+G +R IV +E G TRD + +F +VDT G+ K
Sbjct: 178 SVIGRPNVGKSSIVNKLLGEDRVIVANEEGTTRDAVDTPFTKDGVKFKVVDTAGIRRRGK 237
Query: 227 SQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGL 286
+ T + +V R A +AIE S V++ ++D G+
Sbjct: 238 -------------------VYEKTEKYSVLR--------AMSAIERSDVVLLVLDASTGI 270
Query: 287 TAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSP-LPIS 337
D+ +A + + + II+ VNK + P+K EF L ++P L +S
Sbjct: 271 REQDKHVAGYAHE--AGRGIIIVVNKWDLPKKNSTSAKEFEREIKEEFQYLDYAPILFVS 328
Query: 338 AISGTGTGELLDLVCSELKKV 358
A TG+ LD + S +K+V
Sbjct: 329 A----KTGQRLDQIPSMVKEV 345
>gi|336054210|ref|YP_004562497.1| GTP-binding protein engA [Lactobacillus kefiranofaciens ZW3]
gi|333957587|gb|AEG40395.1| GTP-binding protein engA [Lactobacillus kefiranofaciens ZW3]
Length = 435
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 79/195 (40%), Positives = 107/195 (54%), Gaps = 34/195 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR++ AIV D+ GVTRDR Y ++ W H+F L+DTGG
Sbjct: 2 VLPVVAIVGRPNVGKSTLFNRIINQRLAIVEDKAGVTRDRNYAQAEWMGHQFDLIDTGG- 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
I EG ++ I QA AIEE+ VI+ L +
Sbjct: 61 -------------------ITWEG----------GKIEEEIRAQAEIAIEEADVIVMLTN 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
+T DE +A L + K +ILAVNK ++P + + +F+SLG P+PIS+
Sbjct: 92 VVNHMTDLDERVAHLLYRT--KKPVILAVNKADNPEQR-NDIYDFYSLGLGDPIPISSSH 148
Query: 341 GTGTGELLDLVCSEL 355
GTG G+LLD + +L
Sbjct: 149 GTGIGDLLDEIVKKL 163
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 97/201 (48%), Gaps = 42/201 (20%)
Query: 167 AIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSK 226
+++GRPNVGKS++ N+L+G +R IV +E G TRD + +F +VDT G+ +
Sbjct: 178 SVIGRPNVGKSSIVNKLLGEDRVIVANEEGTTRDAVDTPFTKDGIKFKVVDTAGI----R 233
Query: 227 SQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGL 286
+ + E T + +V R A +AIE S V++ ++D G+
Sbjct: 234 RRGKVYE---------------KTEKYSVMR--------AMSAIERSDVVLLVLDASTGI 270
Query: 287 TAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSP-LPIS 337
D+ +A + + + II+ VNK + P+K +EF L ++P L +S
Sbjct: 271 REQDKHVAGYAHQ--AGRGIIIVVNKWDLPKKNSTSAKEFEREIRTEFQYLDYAPILFVS 328
Query: 338 AISGTGTGELLDLVCSELKKV 358
A TG+ LD + + + V
Sbjct: 329 A----KTGQRLDQIPAMVNNV 345
>gi|450068184|ref|ZP_21847030.1| GTP-binding protein EngA [Streptococcus mutans NLML9]
gi|449207427|gb|EMC08103.1| GTP-binding protein EngA [Streptococcus mutans NLML9]
Length = 436
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 108/196 (55%), Gaps = 38/196 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKSALFNR+ G +IV D GVTRDR+Y ++ W +F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSALFNRIAGERISIVEDVEGVTRDRIYTKAEWLNRQFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAI 339
+ G+T ADE +A L + + K +ILAVNK ++P R I +F++LG P P+S+
Sbjct: 93 KEGITDADEYVAKILYRAH--KPVILAVNKVDNPEMRSAIY---DFYALGLGDPYPVSSA 147
Query: 340 SGTGTGELLDLVCSEL 355
G GTG++LD + L
Sbjct: 148 HGIGTGDVLDAIVDNL 163
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 94/198 (47%), Gaps = 41/198 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
+ +++GRPNVGKS+L N ++G +R I G TRD + +F E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAI-DTTFTDEEGQEFTMIDTAGMR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A AI+ S +++ +++
Sbjct: 235 KSGKVYEN-------------------TEKYSVMR--------AMRAIDRSDIVLMVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPL 334
+ G+ D+ IA + + K I++ VNK ++ +K ++ +F + ++P+
Sbjct: 268 EEGIREYDKRIAGFAHE--AGKGIVVVVNKWDTIKKDNHTMAQWETDIREQFQYIPYAPI 325
Query: 335 P-ISAISGTGTGELLDLV 351
+SA++ +L D++
Sbjct: 326 VFVSALTKQRLHKLPDMI 343
>gi|449980734|ref|ZP_21817376.1| GTP-binding protein EngA [Streptococcus mutans 5SM3]
gi|450006885|ref|ZP_21827439.1| GTP-binding protein EngA [Streptococcus mutans NMT4863]
gi|449176522|gb|EMB78864.1| GTP-binding protein EngA [Streptococcus mutans 5SM3]
gi|449187180|gb|EMB88976.1| GTP-binding protein EngA [Streptococcus mutans NMT4863]
Length = 436
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 108/196 (55%), Gaps = 38/196 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKSALFNR+ G +IV D GVTRDR+Y ++ W +F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSALFNRIAGERISIVEDVEGVTRDRIYTKAEWLNRQFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAI 339
+ G+T ADE +A L + + K +ILAVNK ++P R I +F++LG P P+S+
Sbjct: 93 KEGITDADEYVAKILYRAH--KPVILAVNKVDNPEMRSAIY---DFYALGLGDPYPVSSA 147
Query: 340 SGTGTGELLDLVCSEL 355
G GTG++LD + L
Sbjct: 148 HGIGTGDVLDAIVDNL 163
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 94/198 (47%), Gaps = 41/198 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
+ +++GRPNVGKS+L N ++G +R I G TRD + +F E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAI-DTTFTDEEGQEFTMIDTAGMR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A AI+ S +++ +++
Sbjct: 235 KSGKVYEN-------------------TEKYSVMR--------AMRAIDRSDIVLMVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSE--------FWSLGFSPL 334
+ G+ D+ IA + + K I++ VNK ++ +K V++ F + ++P+
Sbjct: 268 EEGIREYDKRIAGFAHE--AGKGIVVVVNKWDAIKKDNRTVAQWETDIRDNFQYIPYAPI 325
Query: 335 P-ISAISGTGTGELLDLV 351
+SA++ +L D++
Sbjct: 326 VFVSAVTKQRLHKLPDVI 343
>gi|450000380|ref|ZP_21825096.1| GTP-binding protein EngA [Streptococcus mutans N29]
gi|449185759|gb|EMB87629.1| GTP-binding protein EngA [Streptococcus mutans N29]
Length = 436
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 108/196 (55%), Gaps = 38/196 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKSALFNR+ G +IV D GVTRDR+Y ++ W +F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSALFNRIAGERISIVEDVEGVTRDRIYTKAEWLNRQFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAI 339
+ G+T ADE +A L + + K +ILAVNK ++P R I +F++LG P P+S+
Sbjct: 93 KEGITDADEYVAKILYRAH--KPVILAVNKVDNPEMRSAIY---DFYALGLGDPYPVSSA 147
Query: 340 SGTGTGELLDLVCSEL 355
G GTG++LD + L
Sbjct: 148 HGIGTGDVLDAIVDNL 163
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 94/198 (47%), Gaps = 41/198 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
+ +++GRPNVGKS+L N ++G +R I G TRD + +F E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAI-DTTFTDEEGQEFTMIDTAGMR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A AI+ S +++ +++
Sbjct: 235 KSGKVYEN-------------------TEKYSVMR--------AMRAIDRSDIVLMVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSE--------FWSLGFSPL 334
+ G+ D+ IA + + K I++ VNK ++ +K V++ F + ++P+
Sbjct: 268 EEGIREYDKRIAGFAHE--AGKGIVVVVNKWDAIKKDNRTVAQWETDIRDNFQYIPYAPI 325
Query: 335 P-ISAISGTGTGELLDLV 351
+SA++ +L D++
Sbjct: 326 VFVSAVTKQRLHKLPDVI 343
>gi|334127957|ref|ZP_08501859.1| ribosome-associated GTPase EngA [Centipeda periodontii DSM 2778]
gi|333388678|gb|EGK59852.1| ribosome-associated GTPase EngA [Centipeda periodontii DSM 2778]
Length = 447
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 109/191 (57%), Gaps = 33/191 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN++ +IV D PGVTRDR+Y + W HEF ++DTGG
Sbjct: 10 PIVAVVGRPNVGKSTLFNQIGKKRVSIVDDMPGVTRDRIYMDAEWLNHEFTIIDTGG--- 66
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I + + M S QA A+EE+ VI+FLVDG+
Sbjct: 67 ----------------------IEFDESDHILRSMRS----QAELAMEEADVILFLVDGR 100
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
AGLT++DEE+ LR+ K +ILAVNK +S + + + +F+SLG P+PISA +
Sbjct: 101 AGLTSSDEEVGRLLRRT--QKPVILAVNKIDSFDREAL-IYDFYSLGLGDPIPISASNAM 157
Query: 343 GTGELLDLVCS 353
G+LLD + +
Sbjct: 158 NLGDLLDAIVA 168
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 72/149 (48%), Gaps = 29/149 (19%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+A+VGRPNVGKS+L NRL+G R IV D PG TRD + ++L+DT G+
Sbjct: 185 IAVVGRPNVGKSSLVNRLLGEERVIVSDMPGTTRDAIDTHFVRDGANYLLIDTAGMRRKG 244
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
K I L +V R + AI+ + V++ +++ G
Sbjct: 245 K-------------------ITLPVERYSVMR--------SLRAIDRAAVVVMVINAAEG 277
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCE 314
+ D +IA ++ ++ K +I+ VNK +
Sbjct: 278 ILEQDTKIAGYVHES--GKGVIIVVNKWD 304
>gi|293115597|ref|ZP_05792245.2| ribosome-associated GTPase EngA [Butyrivibrio crossotus DSM 2876]
gi|292809015|gb|EFF68220.1| ribosome-associated GTPase EngA [Butyrivibrio crossotus DSM 2876]
Length = 446
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 106/193 (54%), Gaps = 32/193 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN L G +IV D PGVTRDR+Y W + F L+DTGG+
Sbjct: 9 PVVAIVGRPNVGKSTLFNALAGEQISIVKDTPGVTRDRIYADVTWLNYNFTLIDTGGIEP 68
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
SK D+ + S + QA AI + VIIF+VD +
Sbjct: 69 ESK-------DIIL----------------------SQMREQAEIAIASADVIIFMVDVR 99
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL +D ++A+ LR++ K ++L VNK +S +K + V EF++LG P+P+S++
Sbjct: 100 QGLVDSDSKVANMLRRS--GKPVVLVVNKVDSFQKMMTDVYEFYNLGIGDPVPVSSVGKL 157
Query: 343 GTGELLDLVCSEL 355
G G++LD V
Sbjct: 158 GIGDMLDEVVKHF 170
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 95/197 (48%), Gaps = 38/197 (19%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
PR+AIVG+PNVGKS++ N++VG +R IV D G TRD + + +E++ +DT G+
Sbjct: 183 PRIAIVGKPNVGKSSIINKIVGESRVIVSDIAGTTRDAIDTDITYNGNEYVFIDTAGL-- 240
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ + I E+L + I + A+E + V++ ++D
Sbjct: 241 --RRKNKIKEELERYSII-----------------------RTVTAVERADVVLVVIDAT 275
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----LGFSP----L 334
G+T D +IA + K II+ VNK ++ K + E + L F P L
Sbjct: 276 EGVTEQDAKIAGIAHER--GKGIIVVVNKWDAIEKNDKTIYEHTNRIKDILSFMPYAEIL 333
Query: 335 PISAISGTGTGELLDLV 351
ISA +G G++ D +
Sbjct: 334 FISAKTGQRVGKIFDTI 350
>gi|450121548|ref|ZP_21866354.1| GTP-binding protein EngA [Streptococcus mutans ST6]
gi|449229111|gb|EMC28445.1| GTP-binding protein EngA [Streptococcus mutans ST6]
Length = 436
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 108/196 (55%), Gaps = 38/196 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKSALFNR+ G +IV D GVTRDR+Y ++ W +F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSALFNRIAGERISIVEDVEGVTRDRIYTKAEWLNRQFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAI 339
+ G+T ADE +A L + + K +ILAVNK ++P R I +F++LG P P+S+
Sbjct: 93 KEGITDADEYVAKILYRAH--KPVILAVNKVDNPEMRSAIY---DFYALGLGDPYPVSSA 147
Query: 340 SGTGTGELLDLVCSEL 355
G GTG++LD + L
Sbjct: 148 HGIGTGDVLDAIVDNL 163
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 94/198 (47%), Gaps = 41/198 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
+ +++GRPNVGKS+L N ++G +R I G TRD + +F E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAI-DTTFTDEEGQEFTMIDTAGMR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A AI+ S +++ +++
Sbjct: 235 KSGKVYEN-------------------TEKYSVMR--------AMRAIDRSDIVLMVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSE--------FWSLGFSPL 334
+ G+ D+ IA + + K I++ VNK ++ +K V++ F + ++P+
Sbjct: 268 EEGIREYDKRIAGFAHE--AGKGIVVVVNKWDAIKKDNRTVAQWEADIRDNFQYIPYAPI 325
Query: 335 P-ISAISGTGTGELLDLV 351
+SA++ +L D++
Sbjct: 326 VFVSAVTKQRLHKLPDVI 343
>gi|419852393|ref|ZP_14375270.1| cytidylate kinase / ferrous iron transport protein B multi-domain
protein, partial [Bifidobacterium longum subsp. longum
2-2B]
gi|386410881|gb|EIJ25652.1| cytidylate kinase / ferrous iron transport protein B multi-domain
protein, partial [Bifidobacterium longum subsp. longum
2-2B]
Length = 488
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 85/230 (36%), Positives = 115/230 (50%), Gaps = 37/230 (16%)
Query: 136 DETDDRKDSGKKQKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEP 195
DE D+ SG+ + G P +L A+VGRPNVGKS+L NR++G A+V D P
Sbjct: 248 DEGDEDLISGRGFTEGARKAGPKPVGVL---AVVGRPNVGKSSLVNRILGRRAAVVEDTP 304
Query: 196 GVTRDRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAV 255
GVTRDR+ + W +F LVDTGG EA V
Sbjct: 305 GVTRDRVSYDAEWAGTDFKLVDTGGW------------------------------EADV 334
Query: 256 ARMPSMIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCES 315
+ S I QA A+ + ++F+VDGQ G+T DE I LR K ++LAVNK +
Sbjct: 335 EGIESAIASQAQVAVTLADAVVFVVDGQVGMTTTDERIVKMLRA--AGKPVVLAVNKIDD 392
Query: 316 PRKGIMQVSEFWSLGFS-PLPISAISGTGTGELLDLVCSELKKVEVCIGF 364
+ +EFW LG P ISA+ G G G+LLD+ +LK+ E G+
Sbjct: 393 QASEYL-AAEFWKLGLGEPYSISAMHGRGVGDLLDVALDKLKQAEKTSGY 441
>gi|225028014|ref|ZP_03717206.1| hypothetical protein EUBHAL_02283 [Eubacterium hallii DSM 3353]
gi|224954728|gb|EEG35937.1| ribosome biogenesis GTPase Der [Eubacterium hallii DSM 3353]
Length = 445
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 110/194 (56%), Gaps = 32/194 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN L G +IV D PGVTRDR+Y W +++F L+DTGG+
Sbjct: 8 PVVAVVGRPNVGKSTLFNALAGSRISIVEDTPGVTRDRIYAEVSWLDYQFTLIDTGGI-- 65
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P +D+ I S + QA AI + VI+FLVD +
Sbjct: 66 ----EPE-SDDIII----------------------SRMREQAETAIMTADVILFLVDVR 98
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL AD ++AD LR+++ + ++L VNK ++ K + V EF++LG P+P+SA
Sbjct: 99 QGLVDADFKVADMLRRSH--RPVVLVVNKVDNFDKFMPDVYEFYNLGLGDPIPVSAQGKL 156
Query: 343 GTGELLDLVCSELK 356
G G++LD V + +
Sbjct: 157 GIGDMLDQVVEKFE 170
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 29/163 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P++A++G+PN GKS++ N+L+G R IV G TRD + E++ +DT G+
Sbjct: 183 PKIAVIGKPNAGKSSIINKLLGEERVIVSPVAGTTRDAIDTTVKRNGQEYVFIDTAGLRR 242
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
SK + +E +I T+ A+E V + ++D
Sbjct: 243 KSKIKEE-LERYSIIRTV--------------------------TAVERCDVAVLIIDAT 275
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+T D +IA + K +I+AVNK + K + +F
Sbjct: 276 EGITEQDAKIAGIAHER--GKGMIIAVNKWDLVEKDNTTMKKF 316
>gi|451936483|ref|YP_007460337.1| GTP-binding protein [Candidatus Kinetoplastibacterium oncopeltii
TCC290E]
gi|451777406|gb|AGF48381.1| GTP-binding protein [Candidatus Kinetoplastibacterium oncopeltii
TCC290E]
Length = 450
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 101/187 (54%), Gaps = 32/187 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P + +VGRPNVGKS LFNR A+V + G+TRDR+YG +G+HEF+++DTGG
Sbjct: 5 PVIVLVGRPNVGKSTLFNRFTKSKDALVANFSGLTRDRIYGDGAFGQHEFIIIDTGGFEP 64
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+SK Q M + Q AI ES ++IFL+DG+
Sbjct: 65 LSKDQ-----------------------------MYMKVANQTNQAILESDIVIFLLDGK 95
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGT 342
GL D EIA++LRK + K I+L VNK E + +SEF LGF SP ISA G
Sbjct: 96 DGLCNTDYEIANFLRKLSI-KNILLVVNKSEGKTIDTV-ISEFHELGFGSPFLISASHGD 153
Query: 343 GTGELLD 349
G G L++
Sbjct: 154 GVGHLIE 160
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 75/151 (49%), Gaps = 29/151 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R++IVG+PNVGKS L N ++G R I D PG TRD + + ++ +DT G+
Sbjct: 189 RLSIVGQPNVGKSTLINSILGEERLITFDSPGTTRDSINVNFDFSGRSYIFIDTAGIRRR 248
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
S+ + +E ++ T+ +IE+S V++ ++D
Sbjct: 249 SRVS-DYIEKFSVVKTL--------------------------HSIEKSNVVMLVLDANI 281
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCES 315
G++ D IA ++ ++ K I++A+NK +S
Sbjct: 282 GISDQDARIASYILES--GKAIVIAINKWDS 310
>gi|154487333|ref|ZP_02028740.1| hypothetical protein BIFADO_01183 [Bifidobacterium adolescentis
L2-32]
gi|154083851|gb|EDN82896.1| ribosome biogenesis GTPase Der [Bifidobacterium adolescentis L2-32]
Length = 709
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 102/273 (37%), Positives = 130/273 (47%), Gaps = 45/273 (16%)
Query: 99 DESDGQDFGIDVDALEREAKDAV-----REYSSLLSRQLIIQDETDDRKDSGKKQKKRKT 153
D SD +FG +D L R DA+ R+Y S L + DE D+ G ++
Sbjct: 209 DNSD-LNFGETLDVLVRIVDDAIEEQEYRQYVSNLEGYEL--DEGDEELIDGTAFSGGES 265
Query: 154 TIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEF 213
G P +L A+VGRPNVGKS L NR++G A+V D PGVTRDR+ + W +F
Sbjct: 266 KNGPKPVGVL---AVVGRPNVGKSTLVNRILGRRAAVVEDTPGVTRDRVSYDAEWCGTDF 322
Query: 214 MLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEES 273
LVDTGG EA V + S I QA A++ +
Sbjct: 323 KLVDTGGW------------------------------EADVEGIESAIASQAQIAVQLA 352
Query: 274 CVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS- 332
+I +VDG GLT DE I LR K + LAVNK + R+ +EFW +G
Sbjct: 353 DAVILVVDGLVGLTDTDERIVKMLRA--AGKPVTLAVNKVDD-RESEYLTAEFWKMGLGE 409
Query: 333 PLPISAISGTGTGELLDLVCSELKKVEVCIGFL 365
P ISA+ G G GELLD LKK E GFL
Sbjct: 410 PYGISAMHGRGIGELLDAALDSLKKAERTSGFL 442
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 42/73 (57%)
Query: 149 KKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFW 208
KK + T G + L RVA+VGRPNVGKS+L N+L R +V D G TRD +
Sbjct: 433 KKAERTSGFLTPSHLRRVALVGRPNVGKSSLLNQLAHEERTVVNDLAGTTRDPVDEVVTV 492
Query: 209 GEHEFMLVDTGGV 221
+++ +DT G+
Sbjct: 493 DGEDWLFIDTAGI 505
>gi|94971659|ref|YP_593707.1| GTP-binding protein EngA [Candidatus Koribacter versatilis
Ellin345]
gi|94553709|gb|ABF43633.1| Small GTP-binding protein [Candidatus Koribacter versatilis
Ellin345]
Length = 511
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 84/208 (40%), Positives = 116/208 (55%), Gaps = 36/208 (17%)
Query: 149 KKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFW 208
+K+K T+ +P L+ +AIVGRPNVGKS LFNRLVG RAIV DEPG+TRDR+YG S W
Sbjct: 3 RKKKETV-TLP--LVGMIAIVGRPNVGKSTLFNRLVGQRRAIVGDEPGITRDRLYGYSEW 59
Query: 209 GEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATA 268
+VDTGG+ + +D A+ +P+ I RQA
Sbjct: 60 AGKRLRVVDTGGI---------VPDDEAL--------------------IPAEIFRQAKV 90
Query: 269 AIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS 328
A+EE+ VI+ +VD + L + D ++A L++ K +ILAVNK + P K V +F
Sbjct: 91 ALEEADVIVMVVDARTELASPDIDLARLLQRT--GKPLILAVNKIDDP-KLESYVEDFRR 147
Query: 329 LGFSPL-PISAISGTGTGELLDLVCSEL 355
LG + PISA TG ELL+ + +
Sbjct: 148 LGIRTMVPISAEHSTGVAELLEEILERI 175
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 102/237 (43%), Gaps = 50/237 (21%)
Query: 137 ETDDRKDSGKKQKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPG 196
E DD G +Q + T PE ++AI+GRPNVGKS + NRL G RAIV G
Sbjct: 220 EIDDAPHEGAEQPDSELT----PEI---KIAIIGRPNVGKSTMLNRLTGTARAIVSPIAG 272
Query: 197 VTRDRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVA 256
TRD + F +DT G+ K++ + E L++
Sbjct: 273 TTRDAVDEVVERDGQIFRFIDTAGIRRKGKTRL-MAEKLSVV------------------ 313
Query: 257 RMPSMIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKN------YMDKFIILAV 310
A +E + + + L+D G+TA D IA + + ++K+ ++ +
Sbjct: 314 --------MARKHLEAADLALVLIDATEGVTAIDATIAGYAHEAGRSVIVVINKWDLVTI 365
Query: 311 NKCESPRKGIMQVSE------FWSLGFSPLPI-SAISGTGTG---ELLDLVCSELKK 357
N+ + + + E L ++P+ SA +G G+G E ++LV E +K
Sbjct: 366 NRADGKPAAKVDIFEEQVRRHLKFLNYAPIVFASAETGYGSGKIYEAIELVARERRK 422
>gi|311105363|ref|YP_003978216.1| GTP-binding protein EngA [Achromobacter xylosoxidans A8]
gi|310760052|gb|ADP15501.1| GTP-binding protein EngA [Achromobacter xylosoxidans A8]
Length = 450
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 104/193 (53%), Gaps = 32/193 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFNRL A+V D G+TRDR YG GE F+++DTGG
Sbjct: 5 PVVALVGRPNVGKSTLFNRLTRSRAALVADYSGLTRDRHYGEGRVGEIPFIVIDTGGFEP 64
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
V+K +GI L + RQ AI E+ V++FLVD +
Sbjct: 65 VAK-----------------DGILLE------------MARQTRQAIAEADVVVFLVDAR 95
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGT 342
AG+ A D EIA LRK+ + ++LAVNK E G +SEF LG P PISA G
Sbjct: 96 AGINAHDHEIAQLLRKSGQQR-VLLAVNKAEGMGAG-SAISEFHELGLGQPYPISAAHGD 153
Query: 343 GTGELLDLVCSEL 355
G +L++L +L
Sbjct: 154 GIVDLIELALQDL 166
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 29/151 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVGRPNVGKS L N L+G R I D PG TRD + + L+DT G+
Sbjct: 186 KLAIVGRPNVGKSTLINTLMGEERVIAFDMPGTTRDAIEIDFERDGRRYTLIDTAGLRKR 245
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K + E ++ T+ AIE S V++ ++D Q
Sbjct: 246 GKVFEAV-EKFSVIKTL--------------------------QAIEASNVVLLMLDAQT 278
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCES 315
++ D IA ++ + + +++A+NK +
Sbjct: 279 EISEQDAHIAGFVLET--GRAVVVAINKWDG 307
>gi|401565470|ref|ZP_10806308.1| ribosome-associated GTPase EngA [Selenomonas sp. FOBRC6]
gi|400187219|gb|EJO21415.1| ribosome-associated GTPase EngA [Selenomonas sp. FOBRC6]
Length = 441
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 110/191 (57%), Gaps = 33/191 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN++ +IV D PGVTRDR+Y + W HEF ++DTGG
Sbjct: 4 PIVAVVGRPNVGKSTLFNQIGKKRVSIVDDMPGVTRDRIYMDAEWLNHEFTIIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I + + M S QA A+EE+ VI+FLVDG+
Sbjct: 61 ----------------------IEFDESDHILRSMRS----QAELAMEEADVILFLVDGR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
AGLT++DEE+A LR+ K +ILAVNK +S + + + +F++LG P+PISA +
Sbjct: 95 AGLTSSDEEVARLLRRT--KKPVILAVNKIDSFDRESL-IYDFYALGLGDPIPISASNAM 151
Query: 343 GTGELLDLVCS 353
G+LLD + +
Sbjct: 152 NLGDLLDAIVA 162
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 73/149 (48%), Gaps = 29/149 (19%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+A+VGRPNVGKS+L NRL+G R IV D PG TRD + +++L+DT G+
Sbjct: 179 IAVVGRPNVGKSSLVNRLLGEERVIVSDVPGTTRDAIDTHFTRDGAKYLLIDTAGMRRKG 238
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
K I L +V R + AI+ + V++ +++ G
Sbjct: 239 K-------------------ITLPVERYSVMR--------SLRAIDRAGVVLMVINAAEG 271
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCE 314
+ D +IA ++ ++ K +I+ VNK +
Sbjct: 272 ILEQDTKIAGYVHES--GKGVIIVVNKWD 298
>gi|300114862|ref|YP_003761437.1| ribosome-associated GTPase EngA [Nitrosococcus watsonii C-113]
gi|299540799|gb|ADJ29116.1| ribosome-associated GTPase EngA [Nitrosococcus watsonii C-113]
Length = 464
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 81/180 (45%), Positives = 100/180 (55%), Gaps = 34/180 (18%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VA+VGRPNVGKS LFNRL A+V D+PGVTRDR YG ++ GE F +VDTGG
Sbjct: 5 VALVGRPNVGKSTLFNRLTRSRDALVADQPGVTRDRQYGLAYCGEQSFFVVDTGG----- 59
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
IME + IG S++ QA AIEE+ VI FLVD + G
Sbjct: 60 -----IMEQ---ESEIG-----------------SLMRGQAQLAIEEADVIFFLVDAREG 94
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
L++ DEEIA+WLR +K + L +NK E R + SEF+ LG P ISA G G
Sbjct: 95 LSSLDEEIAEWLR--CTEKPLKLVINKAEG-RDEDLVASEFYCLGLGEPAIISARQGQGV 151
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 92/201 (45%), Gaps = 56/201 (27%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRD------RMYGRSFWGEHEFMLVDT 218
++A++GRPNVGKS L NR++G R + + PG TRD R +GR ++ LVDT
Sbjct: 178 QLAVIGRPNVGKSTLVNRILGEERVLSSEIPGTTRDSISIPFRHHGR------DYTLVDT 231
Query: 219 GGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIF 278
G+ + + I++ + + I Q+ +I + V+I
Sbjct: 232 AGI----RRRSRILDRVEKFSVI-----------------------QSLQSIAIAQVVIL 264
Query: 279 LVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCES-PRKGIMQVSE----------FW 327
++D + D +A + ++ K +++AVNK + P + +V + F
Sbjct: 265 VIDAHDSVVEQDLHLAGVILES--GKGVVIAVNKWDGLPLEQRQRVKKDLDRRLPFLVFA 322
Query: 328 SLGFSPLPISAISGTGTGELL 348
+ F ISA+ G+G G+L
Sbjct: 323 RIHF----ISALHGSGVGDLF 339
>gi|449892282|ref|ZP_21788382.1| GTP-binding protein EngA [Streptococcus mutans SF12]
gi|449256244|gb|EMC54075.1| GTP-binding protein EngA [Streptococcus mutans SF12]
Length = 436
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 108/196 (55%), Gaps = 38/196 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKSALFNR+ G +IV D GVTRDR+Y ++ W +F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSALFNRIAGERISIVEDVEGVTRDRIYIKAEWLNRQFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAI 339
+ G+T ADE +A L + + K +ILAVNK ++P R I +F++LG P P+S+
Sbjct: 93 KEGITDADEYVAKILYRTH--KPVILAVNKVDNPEMRSAIY---DFYALGLGDPYPVSSA 147
Query: 340 SGTGTGELLDLVCSEL 355
G GTG++LD + L
Sbjct: 148 HGIGTGDVLDAIVDNL 163
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 94/198 (47%), Gaps = 41/198 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
+ +++GRPNVGKS+L N ++G +R I G TRD + +F E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAI-DTTFTDEEGQEFTMIDTAGMR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A AI+ S +++ +++
Sbjct: 235 KSGKVYEN-------------------TEKYSVMR--------AMRAIDRSDIVLMVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSE--------FWSLGFSPL 334
+ G+ D+ IA + + K I++ VNK ++ +K V++ F + ++P+
Sbjct: 268 EEGIREYDKRIAGFAHE--AGKGIVVVVNKWDAIKKDNRTVAQWETDIRDNFQYIPYAPI 325
Query: 335 P-ISAISGTGTGELLDLV 351
+SA++ +L D++
Sbjct: 326 VFVSAVTKQRLHKLPDVI 343
>gi|333394949|ref|ZP_08476768.1| GTP-binding protein Der [Lactobacillus coryniformis subsp.
coryniformis KCTC 3167]
gi|336392879|ref|ZP_08574278.1| GTP-binding protein Der [Lactobacillus coryniformis subsp. torquens
KCTC 3535]
Length = 436
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 77/194 (39%), Positives = 110/194 (56%), Gaps = 36/194 (18%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y + W HEF L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTVFNRIAGQRVSIVDDAPGVTRDRIYTSAEWLGHEFNLIDTGGIDI 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
V QP + + I+ QA AIEE+ VI+F+ +
Sbjct: 64 V--DQPFVEQ----------------------------IKEQAEIAIEEADVIVFVTSVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQ-VSEFWSLGF-SPLPISAISG 341
G+T ADE +A L ++ DK ++LAVNK ++ + + Q + ++++LGF P+ IS + G
Sbjct: 94 EGITDADENVARILYRS--DKPVVLAVNKVDN--QDLRQDIYDYYALGFDEPIGISGVHG 149
Query: 342 TGTGELLDLVCSEL 355
G G+LLD +
Sbjct: 150 IGVGDLLDAIIKHF 163
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 82/163 (50%), Gaps = 30/163 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGR-SFWGEHEFMLVDTGGVLN 223
R +++GRPNVGKS+L N ++G NR IV D G TRD + R + EF ++DT G+
Sbjct: 176 RFSLIGRPNVGKSSLVNAILGENRVIVSDIAGTTRDAIDTRFAAANGTEFNMIDTAGLRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K+ N A S++ +A +AI+ S V++ +++ +
Sbjct: 236 RGKAYEN-------------------------AEKYSVL--RAMSAIDRSDVVLVVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D++IA + + + II+ VNK ++ +K +S F
Sbjct: 269 EGIREQDKKIAGYAHE--AGRGIIIVVNKWDTLKKDNHSLSNF 309
>gi|167753390|ref|ZP_02425517.1| hypothetical protein ALIPUT_01664 [Alistipes putredinis DSM 17216]
gi|167658015|gb|EDS02145.1| ribosome biogenesis GTPase Der [Alistipes putredinis DSM 17216]
Length = 433
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 80/191 (41%), Positives = 106/191 (55%), Gaps = 33/191 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRLVG +AIV G TRDR YG++ W EF ++DTGG S
Sbjct: 4 VAIVGRPNVGKSTLFNRLVGQRKAIVDATAGTTRDRHYGKTDWNGREFSVIDTGG---YS 60
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+ +I ED I RQ AIEE+ VI+FLV+ G
Sbjct: 61 VNSDDIFED--------------------------DIRRQVMLAIEEADVILFLVEVNTG 94
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+T D+ +AD LR+ K ++L NK ++ I EF+SLG P IS++SG+GT
Sbjct: 95 ITDLDQMMADILRRT--SKKVLLVCNKVDN-YDLIYSSHEFYSLGLGEPYCISSMSGSGT 151
Query: 345 GELLDLVCSEL 355
G+L+D + +L
Sbjct: 152 GDLMDEIVRDL 162
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 96/207 (46%), Gaps = 37/207 (17%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
E LPR+ IVGRPNVGKS+L N L+G R IV G TRD ++ R +F LVDT
Sbjct: 170 EEELPRITIVGRPNVGKSSLTNALLGEERNIVTPIAGTTRDAIHSRYNKYGLDFYLVDTA 229
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G+ + + + EDL + + ++ AIEES V I +
Sbjct: 230 GM----RKKGKVTEDLEFYSVM-----------------------RSIRAIEESDVCILM 262
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLG-------FS 332
+D Q GL + D I + + +N K ++ VNK + KG + E W F+
Sbjct: 263 LDAQQGLESQDLNIHNLIVRN--RKGCVIVVNKWDLVEKGNNTMKE-WKEALAKKLAPFN 319
Query: 333 PLPISAISGTGTGELLDLVCSELKKVE 359
+PI S +L+++ + ++ E
Sbjct: 320 DIPIIFTSVLNKQRILEVLQTAIRVYE 346
>gi|347532222|ref|YP_004838985.1| GTP-binding protein Der [Roseburia hominis A2-183]
gi|345502370|gb|AEN97053.1| GTP-binding protein Der [Roseburia hominis A2-183]
Length = 441
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 107/193 (55%), Gaps = 32/193 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN L G +IV D PGVTRDR+Y W ++ F ++DTGG+
Sbjct: 4 PVVAVVGRPNVGKSTLFNALAGERISIVKDTPGVTRDRIYADVNWLDYHFTMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P+ +R+ +++M QA AI + VIIFL D +
Sbjct: 62 ----EPD-------------------SRDVILSQM----REQAEIAIATADVIIFLTDVR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL +D ++AD LR++ K ++L VNK +S K + V EF++LG P PISA S
Sbjct: 95 QGLQDSDSKVADMLRRS--GKPVVLVVNKVDSFEKFMPDVYEFYNLGIGDPFPISAASML 152
Query: 343 GTGELLDLVCSEL 355
G G++LD V
Sbjct: 153 GLGDMLDEVVKHF 165
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 92/197 (46%), Gaps = 38/197 (19%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P+VAI+G+PNVGKS+L N+L +R IV D G TRD + + E++ +DT G+
Sbjct: 178 PKVAIIGKPNVGKSSLINKLAQEDRVIVSDIAGTTRDAIDTDITYDGKEYVFIDTAGL-- 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ + I E++ + I +A A+E + V I ++D
Sbjct: 236 --RRKNKIKEEIERYSII-----------------------RAVTAVERADVCIIVIDAT 270
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSEFWSLGFSPLP----- 335
G+T D +IA + K II+AVNK E K I + +E S +P
Sbjct: 271 EGVTEQDAKIAGIAHER--GKGIIIAVNKWDAIEKDDKTIYRHTEKIRQILSFMPYAEII 328
Query: 336 -ISAISGTGTGELLDLV 351
ISA SG ++ +L+
Sbjct: 329 FISAKSGQRLNKIFELI 345
>gi|451947786|ref|YP_007468381.1| ribosome-associated GTPase EngA [Desulfocapsa sulfexigens DSM
10523]
gi|451907134|gb|AGF78728.1| ribosome-associated GTPase EngA [Desulfocapsa sulfexigens DSM
10523]
Length = 449
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 102/185 (55%), Gaps = 32/185 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VA+VGRPNVGKS LFNR+ +A+V PGVTRDR Y + W + FMLVDTGG+
Sbjct: 9 VALVGRPNVGKSTLFNRITRSRKALVDPTPGVTRDRHYEKVVWNDKLFMLVDTGGI---- 64
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+A+ M I QA AAIEE+ +I+F++DG+ G
Sbjct: 65 -------------------------EDASGDTMGGHIRNQALAAIEEADIILFVLDGREG 99
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGTGT 344
+T AD+E+A+ LR+ DK I +NK + P + Q+++F+ LG + L +SA G
Sbjct: 100 VTPADKEVANLLRRT--DKTIFYVINKIDGPEQETEQMAQFYELGVNELWAVSAEHKYGF 157
Query: 345 GELLD 349
L+D
Sbjct: 158 HTLMD 162
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 97/202 (48%), Gaps = 38/202 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VA GRPNVGKS++ NR++G +R +V + G TRD + G++ ++L+DT G+
Sbjct: 183 KVAFFGRPNVGKSSMINRILGHDRMVVSEVSGTTRDSVDTLLTHGKYNYLLIDTAGIRRK 242
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K++ +E +I +A AA+E+ + + L+D +
Sbjct: 243 GKTKEK-LEKFSIL--------------------------KALAALEKCDIAVVLIDAEE 275
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCE------SPRKGIMQVSEFWS--LGFSP-LP 335
G+T D ++ + ++ + +IL VNK + +K IM +GF+P L
Sbjct: 276 GITEQDTKVIGYTQEQ--GRGLILLVNKWDLVKDDKERQKQIMGEIALAVPFVGFAPLLT 333
Query: 336 ISAISGTGTGELLDLVCSELKK 357
SA++G G L + S ++
Sbjct: 334 ASALTGYGIKRLFPTIGSVYRQ 355
>gi|238855193|ref|ZP_04645512.1| ribosome-associated GTPase EngA [Lactobacillus jensenii 269-3]
gi|260664556|ref|ZP_05865408.1| ribosome-associated GTPase EngA [Lactobacillus jensenii SJ-7A-US]
gi|313471978|ref|ZP_07812470.1| ribosome-associated GTPase EngA [Lactobacillus jensenii 1153]
gi|238832085|gb|EEQ24403.1| ribosome-associated GTPase EngA [Lactobacillus jensenii 269-3]
gi|239529090|gb|EEQ68091.1| ribosome-associated GTPase EngA [Lactobacillus jensenii 1153]
gi|260561621|gb|EEX27593.1| ribosome-associated GTPase EngA [Lactobacillus jensenii SJ-7A-US]
Length = 436
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 104/194 (53%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVG+PNVGKS LFNR++ AIV D PGVTRDR Y ++ W HEF ++DTGG
Sbjct: 3 LPTVAIVGQPNVGKSTLFNRIINERLAIVEDRPGVTRDRNYAKASWLGHEFNIIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I EG R+ I QA A+EE+ VI+ +
Sbjct: 61 ------------------ITWEG----------GRIEDEIRAQADIAMEEADVIVMITSV 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
LT DE IA L ++ K ++LAVNK ++P + + +F+SLG P+PIS+ G
Sbjct: 93 ALHLTDLDERIARILYRS--SKPVLLAVNKADNPEQR-ADIYDFYSLGLGDPIPISSTHG 149
Query: 342 TGTGELLDLVCSEL 355
TG G+LLD +
Sbjct: 150 TGIGDLLDAIVENF 163
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 92/196 (46%), Gaps = 41/196 (20%)
Query: 167 AIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEH--EFMLVDTGGVLNV 224
+++GRPNVGKS++ N ++G R IV +E G TRD + F E +F ++DT G+
Sbjct: 178 SVIGRPNVGKSSIINAMLGQKRVIVANEEGTTRDAV-DTPFVAEDGTKFRMIDTAGI--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E T + +V R A AAI+ S V+ ++D
Sbjct: 234 -RRRGKVYE---------------KTEKYSVLR--------AQAAIQRSDVVCLVLDAST 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPLP- 335
G+ D+ +A + + +++ VNK + P+K EF L ++P+
Sbjct: 270 GIREQDKHVAGFAHD--AGRGMLIVVNKWDLPKKDSNSAKDFTRVIREEFQYLDYAPIVF 327
Query: 336 ISAISGTGTGELLDLV 351
+SA +G +L DL+
Sbjct: 328 VSAKTGKNLEQLPDLI 343
>gi|149190086|ref|ZP_01868363.1| GTP-binding protein EngA [Vibrio shilonii AK1]
gi|148836116|gb|EDL53076.1| GTP-binding protein EngA [Vibrio shilonii AK1]
Length = 494
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 109/192 (56%), Gaps = 40/192 (20%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YG++ GEHEF+++DTGG+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+G T E +M Q+ AAI+E+ V++FLVD
Sbjct: 61 ----------------------DG----TEEGVETKMAE----QSLAAIDEADVVLFLVD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSPL-PIS 337
G+AGLT+ADE IA LRK ++K L +NK + GI +EFW LG + I+
Sbjct: 91 GRAGLTSADEAIAQHLRK--IEKPSFLVINKVD----GIDADAASAEFWQLGVEDMYHIA 144
Query: 338 AISGTGTGELLD 349
A G G L++
Sbjct: 145 AAHGRGVTALIE 156
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 40/220 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS L NR++G R +V D PG TRD +Y + E++L+DT GV
Sbjct: 206 KLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMQRDDREYVLIDTAGVRRR 265
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + E ++ T+ A+E++ V++ ++D +
Sbjct: 266 RRINETV-EKFSVVKTL--------------------------KAVEDANVVLLVIDARE 298
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSEFWSLGFSPLP----IS 337
++ D + + + + I++AVNK ++ K ++ LGF IS
Sbjct: 299 NISDQDLSLLGFALNS--GRSIVIAVNKWDGLDTDVKEHVKKELDRRLGFVDFARIHFIS 356
Query: 338 AISGTGTGELLDLVCSELKKVEVCIGFLLICNAITKIFHI 377
A+ GTG G L + V K +G + +T+I +
Sbjct: 357 ALHGTGVGHLFESVQEAYKSATTRVG----TSVLTRIMKM 392
>gi|261749359|ref|YP_003257044.1| GTP-binding protein EngA [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
gi|261497451|gb|ACX83901.1| GTP-binding protein EngA [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
Length = 439
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 81/185 (43%), Positives = 106/185 (57%), Gaps = 33/185 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
V+IVGRPNVGKS LFNRLVG +AIV GVTRDR+YG S W F LVDTGG +
Sbjct: 5 VSIVGRPNVGKSTLFNRLVGRRKAIVHVRSGVTRDRIYGESEWNGVHFSLVDTGGYNPIH 64
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
K N+++ + I +Q AI+E+ VI+FLVD + G
Sbjct: 65 K---NLLD--------------------------AEIIKQILIAIKEADVILFLVDIKIG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP-LPISAISGTGT 344
+ D EI+ LRK K+I+L VNK ++ K + ++F+ LGF ISAI+G+GT
Sbjct: 96 ILDTDVEISQLLRK--YKKYILLVVNKVDNG-KYMYHNTDFFCLGFREYYYISAINGSGT 152
Query: 345 GELLD 349
GELLD
Sbjct: 153 GELLD 157
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 69/155 (44%), Gaps = 29/155 (18%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
+ +LPR +++GRPNVGKS L N + N IV + G TRD + ++ +LVDT
Sbjct: 174 KEVLPRFSVIGRPNVGKSTLINSFLEKNHHIVTNVSGTTRDSLDVFCKKLGYKCILVDTP 233
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
GV SK I E L +T+ + +IE + + +
Sbjct: 234 GVRKKSK----ISESLEFYSTM-----------------------RTVKSIESTDICFLM 266
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
VD G A D I + +N K II+ +NK +
Sbjct: 267 VDAVRGWEAQDRNIFRLVERN--QKGIIILINKWD 299
>gi|281421766|ref|ZP_06252765.1| ribosome-associated GTPase EngA [Prevotella copri DSM 18205]
gi|281404261|gb|EFB34941.1| ribosome-associated GTPase EngA [Prevotella copri DSM 18205]
Length = 437
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 105/192 (54%), Gaps = 33/192 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRL RAIV D G TRDR YG+ W EF +VDTGG V
Sbjct: 5 VAIVGRPNVGKSTLFNRLTQSRRAIVSDTAGTTRDRQYGKCSWNGREFSVVDTGGW--VV 62
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
KS +I ED I +Q A EE+ +++FLVD G
Sbjct: 63 KSD-DIFED--------------------------AIRKQVLVATEEADLVLFLVDVNTG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
LT DE++A LR+ + +IL NK ++ + Q +EF+ LG P ISA +G GT
Sbjct: 96 LTDWDEDVALILRRAKLP--VILVANKVDNSAE-YYQAAEFYKLGLGDPQCISAATGGGT 152
Query: 345 GELLDLVCSELK 356
G+LLD++ +L+
Sbjct: 153 GDLLDMILDKLQ 164
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 75/155 (48%), Gaps = 29/155 (18%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
E +PR A+VGRPN GKS++ N +G +R IV + G TRD +Y R +F LVDT
Sbjct: 172 EEDIPRFAVVGRPNAGKSSIINAFIGEDRNIVTEIAGTTRDSIYTRYDKFGFDFYLVDTA 231
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G+ + + + EDL + + ++ AIE S V I +
Sbjct: 232 GI----RRKNKVSEDLEFYSVM-----------------------RSIRAIENSDVCILM 264
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
+D G+ D I ++KN +K +++ VNK +
Sbjct: 265 LDATRGIETQDMNIFQLIQKN--NKSLVVVVNKWD 297
>gi|304440203|ref|ZP_07400093.1| ribosome-associated GTPase EngA [Peptoniphilus duerdenii ATCC
BAA-1640]
gi|304371252|gb|EFM24868.1| ribosome-associated GTPase EngA [Peptoniphilus duerdenii ATCC
BAA-1640]
Length = 442
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 113/194 (58%), Gaps = 33/194 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P V+I+G+PNVGKS LFN++VG +I D PGVTRDR+Y + W +F+LVDTGG L+
Sbjct: 8 PIVSIIGKPNVGKSTLFNKIVGRKISITEDTPGVTRDRIYSDASWQGRKFLLVDTGG-LD 66
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ ED+ + S I+ QA A+E S VIIF++DG
Sbjct: 67 LKD------EDIFM----------------------SSIKGQADLALETSDVIIFVLDGI 98
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL+ D +IA +LR++ +K IIL +NK +S + +F+ LG P+ ISA GT
Sbjct: 99 HGLSPTDVDIAKYLRRS--NKKIILCINKYDS-KSAKDNYYDFFELGLGIPVLISAEQGT 155
Query: 343 GTGELLDLVCSELK 356
G G+LLD+V SE +
Sbjct: 156 GVGDLLDIVTSEFE 169
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 96/197 (48%), Gaps = 38/197 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
RV ++G+PNVGKS+L N ++G R+IV D PG TRD + + + E LVDT G+
Sbjct: 181 RVTLIGKPNVGKSSLINFILGEERSIVTDIPGTTRDSIDSHFIYKDTELTLVDTAGL--- 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + I E AV R + + AIE S V I L+D +
Sbjct: 238 -RKKKKINE--------------------AVERYSVI---RTLTAIERSNVCILLIDAEE 273
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS--------LGFSPLP- 335
G++ D +I + N +K I++AVNK ++ K + ++ + ++P+
Sbjct: 274 GVSEQDSKIVGYAHDN--NKAIVVAVNKWDAVTKDNDSIKKYEKSIRERLPFINYAPIIF 331
Query: 336 ISAISGTGTGELLDLVC 352
ISA++G +LLD V
Sbjct: 332 ISALTGQRVDKLLDTVL 348
>gi|220935213|ref|YP_002514112.1| GTP-binding protein EngA [Thioalkalivibrio sulfidophilus HL-EbGr7]
gi|254783176|sp|B8GTN1.1|DER_THISH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|219996523|gb|ACL73125.1| GTP-binding protein EngA [Thioalkalivibrio sulfidophilus HL-EbGr7]
Length = 464
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 79/199 (39%), Positives = 110/199 (55%), Gaps = 34/199 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP +A+VGRPNVGKS LFN+L A+V D PG+TRDR YG G +M+VDTGG+
Sbjct: 1 MLPVIALVGRPNVGKSTLFNQLTRSRDALVADFPGLTRDRQYGPGRVGGFPYMVVDTGGL 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+++ N+M RQ AI+ES V++FLVD
Sbjct: 61 SGEAETLDNLMA------------------------------RQTQQAIDESDVVLFLVD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAIS 340
G+ GLTAAD+ IA LR K ++L VNK + ++EF +LGF +P+PI+A
Sbjct: 91 GREGLTAADQAIARSLRTQ--GKKVLLVVNKTDGV-DADQAMAEFHALGFGAPIPIAATH 147
Query: 341 GTGTGELLDLVCSELKKVE 359
G G L++ V + L +VE
Sbjct: 148 GRGVLGLMNAVHALLPEVE 166
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 94/219 (42%), Gaps = 42/219 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R+A VGRPN GKS L NR++G R + + PG TRD ++ ++ L+DT GV
Sbjct: 179 RIAFVGRPNAGKSTLINRILGEERVVATEIPGTTRDSIFIPFERDGQQYTLIDTAGVRRR 238
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
S+ I E ++ T+ AI+ + V++ ++D +
Sbjct: 239 SRVHEAI-EKFSVVKTL--------------------------QAIDAAHVVVMVLDARE 271
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCES----PRKGIMQVSEFWSLGFSPLP----I 336
G++ D + + + +++A+NK + R I + L F I
Sbjct: 272 GISEQDAHLLGVVLD--AGRALVVAINKWDGLDPDQRDRIRHELDL-KLPFLDFAEKRFI 328
Query: 337 SAISGTGTGELLDLVCSELKKVEVCIGFLLICNAITKIF 375
SA+ GTG G+L + +K+ + N +TK+
Sbjct: 329 SALHGTGVGDLF----AHVKRAYDSAFIKVSTNHLTKLL 363
>gi|403222906|dbj|BAM41037.1| uncharacterized protein TOT_030000298 [Theileria orientalis strain
Shintoku]
Length = 527
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 96/189 (50%), Gaps = 36/189 (19%)
Query: 166 VAIVGRPNVGKSALFNRLVG--GNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
V+IVGRPNVGKS++FNR+ +IV D PG TRDR Y + W +F ++DTGG +
Sbjct: 66 VSIVGRPNVGKSSVFNRITKLFHYGSIVSDVPGTTRDRQYSIADWNGKQFRIIDTGGYDD 125
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I E + AI ES IIF+VDG
Sbjct: 126 EQMYSDEIREHI-------------------------------DTAIRESSTIIFVVDGI 154
Query: 284 AGLTAADEEIADWL--RKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAIS 340
GLT D E+ D+L K D I+L VNKCES R+G M +FW LG P P+SA+
Sbjct: 155 EGLTTKDIELRDYLFRHKRKRDFKILLCVNKCESYRRGDMLAQDFWKLGLGQPYPVSALH 214
Query: 341 GTGTGELLD 349
G+G ELLD
Sbjct: 215 GSGLAELLD 223
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 31/146 (21%)
Query: 167 AIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSK 226
AIV RPN GKS+L N+LVG NR IV E G T+ D+ VL
Sbjct: 249 AIVIRPNSGKSSLLNKLVGKNRCIVSPEEGTTQ-----------------DSTKVL---- 287
Query: 227 SQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGL 286
I D + I G+ L T++ R + ++ + +I +S + + ++D G+
Sbjct: 288 ----ITHDGTKMSLIDTAGMKLLTKD----RRSYLSQKSSLKSIRQSDLCLLVIDSSWGI 339
Query: 287 TAADEEIADWLRKNYMDKFIILAVNK 312
+ D +A+ +R+ +K I+ NK
Sbjct: 340 SKNDVRMAEEIRQE--NKAAIIVCNK 363
>gi|261367335|ref|ZP_05980218.1| ribosome-associated GTPase EngA [Subdoligranulum variabile DSM
15176]
gi|282570094|gb|EFB75629.1| ribosome biogenesis GTPase Der [Subdoligranulum variabile DSM
15176]
Length = 447
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 110/193 (56%), Gaps = 32/193 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FN+L G AIV D PGVTRDR++ W ++F+LVDTGG+
Sbjct: 4 PIVAIVGRPNVGKSTIFNKLTGQRLAIVEDTPGVTRDRIFCDCEWCGNKFLLVDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P I + L +A M QA AI+ + II + +
Sbjct: 62 ----EPRIDDGL-------------------LAHM----REQAQIAIDSADCIIMVTELT 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP-LPISAISGT 342
G+T D++IA L ++ K ++LAVNKC+ + M++ +F+SLG +P+S + G
Sbjct: 95 NGVTPQDQDIAGMLMRS--GKPVVLAVNKCDKIGEPPMELYDFYSLGLGEIIPVSGVHGH 152
Query: 343 GTGELLDLVCSEL 355
GTG+LLD VC+ L
Sbjct: 153 GTGDLLDAVCAHL 165
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 100/224 (44%), Gaps = 52/224 (23%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRM-------YGRSFWGEHEFMLVDT 218
VA++GRPNVGKS+L N ++G NR IV +E G TRD + YG+ F+ DT
Sbjct: 180 VAVIGRPNVGKSSLINHILGENRLIVANEAGTTRDAIDTLVENKYGK-------FVFTDT 232
Query: 219 GGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIF 278
G+ K E+ V R + ++ AA+E S V +
Sbjct: 233 AGLRKKGKV------------------------ESGVERYSVL---RSLAAVERSRVCVI 265
Query: 279 LVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIM-------QVSEFWSLGF 331
++D G T D ++A + + K I+AVNK ++ K Q+ E +S
Sbjct: 266 MIDATVGFTEQDSKVAGYAHEQ--GKACIIAVNKWDAVEKDSYTMDAMRKQLEEDFSF-M 322
Query: 332 SPLPISAISGTGTGELLDLVCSELKKVEVCIGFLLICNAITKIF 375
S PI IS TG+ +D + + V++ G + A+ ++
Sbjct: 323 SYAPIVFISAK-TGQRVDKLFETIHFVDIQNGTRVPTGALNEML 365
>gi|406980534|gb|EKE02122.1| hypothetical protein ACD_20C00425G0019 [uncultured bacterium]
Length = 444
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 108/188 (57%), Gaps = 34/188 (18%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS NRL+G +IV D PGVTRDR+Y W +F ++DTGG++
Sbjct: 5 PIVAIVGRPNVGKSTFVNRLLGSRESIVDDMPGVTRDRLYFNVEWAGKDFTVIDTGGIV- 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
P + +++ ++ I Q A EE+ VIIF+VDG+
Sbjct: 64 -----PGVEDEIMMS-----------------------IYTQVEIATEEADVIIFMVDGK 95
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL D ++A+ LRK+ +K I L VNK + P K + +++F++LG P P+S++ GT
Sbjct: 96 EGLNPVDIDVANLLRKS--EKPIFLTVNKIDVPEKTSL-IADFYALGIGDPYPVSSMHGT 152
Query: 343 -GTGELLD 349
G G+LLD
Sbjct: 153 GGVGDLLD 160
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 72/156 (46%), Gaps = 33/156 (21%)
Query: 159 PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDT 218
P HL AIVGRPN GKS+L N L+G R IV + G TRD + + + LVDT
Sbjct: 177 PVHL----AIVGRPNAGKSSLVNSLLGEERVIVSEVAGTTRDAINTNLCVDGNCYTLVDT 232
Query: 219 GGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIF 278
G+ ++ + G+E +A ++ AI ES V +
Sbjct: 233 AGIRRKARVE------------YGIEKFSVA---------------RSIKAIRESDVTLL 265
Query: 279 LVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
++D G+T D++I + N + I++ VNK +
Sbjct: 266 IIDATEGITDQDKKIGEI--SNDAGRGIVIVVNKWD 299
>gi|90579361|ref|ZP_01235171.1| GTP-binding protein EngA [Photobacterium angustum S14]
gi|90440194|gb|EAS65375.1| GTP-binding protein EngA [Photobacterium angustum S14]
Length = 500
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 105/192 (54%), Gaps = 40/192 (20%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YGR+ EHEF+++DTGG+
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAELEEHEFIVIDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+G T E +M Q+ AAIEE+ V++FLVD
Sbjct: 61 ----------------------DG----TEEGVETKMAE----QSLAAIEEADVVLFLVD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSPL-PIS 337
G+AGLTAADE IA LR +K L VNK + GI +EFW LG + I+
Sbjct: 91 GRAGLTAADEAIAKHLRSR--EKPTFLVVNKVD----GIDADSACAEFWRLGVDAMYQIA 144
Query: 338 AISGTGTGELLD 349
A G L++
Sbjct: 145 ATQNRGVTALME 156
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 36/195 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS L NR++G R +V D PG TRD +Y E++L+DT G+
Sbjct: 213 KLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGQEYVLIDTAGIRR- 271
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K+ +E ++ T+ A+E++ V++ ++D +
Sbjct: 272 RKNMHQAVEKFSVIQTL--------------------------KAVEDANVVLLVIDARE 305
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQ--VSEF-WSLGFSPLP----IS 337
++ D + + + +++AVNK + + + SE LGF IS
Sbjct: 306 NISDQDLSLLGFALN--AGRSLVIAVNKWDGLDNEVKERVKSELDRRLGFVDFARIHFIS 363
Query: 338 AISGTGTGELLDLVC 352
A+ GTG G L + V
Sbjct: 364 ALHGTGVGHLYESVI 378
>gi|58337266|ref|YP_193851.1| GTP-binding protein EngA [Lactobacillus acidophilus NCFM]
gi|81311473|sp|Q5FKF4.1|DER_LACAC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|58254583|gb|AAV42820.1| phosphoglycerate dehydrogenase [Lactobacillus acidophilus NCFM]
Length = 435
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 108/195 (55%), Gaps = 34/195 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVG+PNVGKS LFNR++ AIV D+PGVTRDR Y ++ W H+F L+DTGG
Sbjct: 2 VLPVVAIVGQPNVGKSTLFNRIINQRLAIVEDKPGVTRDRNYAQAEWMGHKFDLIDTGG- 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
I EG ++ I QA AIEE+ VI+ L +
Sbjct: 61 -------------------ITWEG----------GKIEDEIRAQAEIAIEEADVIVMLTN 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
+T DE IA L + K +ILAVNK ++P + + +F+SLG P+P+S+
Sbjct: 92 VVNHVTDLDERIARLLYRT--KKPVILAVNKADNPEQR-NDIYDFYSLGLGDPIPVSSSH 148
Query: 341 GTGTGELLDLVCSEL 355
GTG G+LLD + ++
Sbjct: 149 GTGIGDLLDEIVNDF 163
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 98/201 (48%), Gaps = 42/201 (20%)
Query: 167 AIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSK 226
+++GRPNVGKS+L N+L+G +R IV +E G TRD + +F +VDT G+ +
Sbjct: 178 SMIGRPNVGKSSLVNKLLGEDRVIVANEEGTTRDAVDTPFTKDGIKFKVVDTAGI----R 233
Query: 227 SQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGL 286
+ + E T + +V R A +AIE S V++ ++D G+
Sbjct: 234 RRGKVYE---------------KTEKYSVLR--------AMSAIERSDVVLLVLDASTGI 270
Query: 287 TAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSP-LPIS 337
D+ +A + + + II+ VNK + P K SEF L ++P L +S
Sbjct: 271 REQDKHVAGYAHE--AGRGIIIVVNKWDLPEKNSTSAKEFEREIRSEFQYLDYAPILFVS 328
Query: 338 AISGTGTGELLDLVCSELKKV 358
A TG+ +D + S +K+V
Sbjct: 329 A----KTGQRIDQIPSMVKEV 345
>gi|390954549|ref|YP_006418307.1| ribosome-associated GTPase EngA [Aequorivita sublithincola DSM
14238]
gi|390420535|gb|AFL81292.1| ribosome-associated GTPase EngA [Aequorivita sublithincola DSM
14238]
Length = 434
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/195 (40%), Positives = 108/195 (55%), Gaps = 33/195 (16%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VA+VGRPNVGKS FNRL+ AIV GVTRDR YG+S W EF L+DTGG +
Sbjct: 4 VAVVGRPNVGKSTFFNRLIQRREAIVDAVSGVTRDRHYGKSDWNGKEFSLIDTGGYV--- 60
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
K +I E + I++Q AI+E+ IIF+VD ++G
Sbjct: 61 KGSDDIFE--------------------------AEIDKQVELAIDEADAIIFMVDVESG 94
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+T D+E+A LR++ K I LA+NK + + + EF+SLGF +S+I+G+GT
Sbjct: 95 VTGMDQEVAKLLRRS--KKPIFLAINKVDGASR-MNAALEFYSLGFEYQYNLSSINGSGT 151
Query: 345 GELLDLVCSELKKVE 359
GELLD + L E
Sbjct: 152 GELLDDLVKALPDTE 166
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 65/147 (44%), Gaps = 28/147 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LPR A+VGRPN GKS+ N L+G +R IV D G TRD + + EF LVDT G+
Sbjct: 173 LPRFAVVGRPNAGKSSFINALIGKDRYIVTDIAGTTRDSIDTKYDRFGFEFNLVDTAGIR 232
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
SK + EDL + + ++ AIE VII + D
Sbjct: 233 KKSK----VKEDLEFYSVM-----------------------RSVRAIEHCDVIILVFDA 265
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILA 309
G E I WL + +ILA
Sbjct: 266 TRGFDGQVENIF-WLAQRNNKGIVILA 291
>gi|310659189|ref|YP_003936910.1| GTPase involved in ribosome synthesis and maintenance
[[Clostridium] sticklandii]
gi|308825967|emb|CBH22005.1| GTPase involved in ribosome synthesis and maintenance
[[Clostridium] sticklandii]
Length = 438
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 110/193 (56%), Gaps = 33/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNR+ G AIV D PGVTRDR+Y ++ W F ++DTGG+
Sbjct: 3 PIVAIVGRPNVGKSTLFNRIAGERIAIVEDTPGVTRDRIYAQAEWVSKHFTIIDTGGI-- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P+ E+L +P + +QA A++ + VI+F+VDG+
Sbjct: 61 ----EPD-SEEL----------------------IPKKMRQQAELAMDMAQVILFVVDGK 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
AGLT +D ++A L K K ++L VNK ++ + +F+ LGF P+P+S+ G
Sbjct: 94 AGLTPSDRDVALMLLKT--KKPVLLVVNKVDN-KNLPDDFYDFYELGFGEPIPVSSSIGL 150
Query: 343 GTGELLDLVCSEL 355
GTG+LLD V
Sbjct: 151 GTGDLLDEVVKNF 163
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 90/213 (42%), Gaps = 42/213 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VAIVG+PN GKS++ NRL+G R IV G TRD + +++ +DT G+
Sbjct: 177 KVAIVGKPNAGKSSILNRLIGEERVIVSPIAGTTRDAIDTYIEMDGKKYLFIDTAGIRRK 236
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK NI + I +A A++E++ V++ ++D
Sbjct: 237 SKVYENIEKYSVI---------------------------RAYASVEKADVVLTVIDATE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLP--------- 335
G++ D +IA K I+ VNK + K V E+ LP
Sbjct: 270 GISEQDSKIAGLAHD--AGKASIVVVNKWDLIEKDNHSVKEYTKKIREELPFMQYCPILF 327
Query: 336 ISAISGTGTG---ELLDLVCSELKKVEVCIGFL 365
+SA++ G E +D + E K V G L
Sbjct: 328 VSALTSQRMGKIKETVDFIFDEASK-RVATGVL 359
>gi|297538116|ref|YP_003673885.1| ribosome-associated GTPase EngA [Methylotenera versatilis 301]
gi|297257463|gb|ADI29308.1| ribosome-associated GTPase EngA [Methylotenera versatilis 301]
Length = 484
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 108/203 (53%), Gaps = 41/203 (20%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP V +VGRPNVGKS LFNRL A+V D PG+TRDR YGR +++VDTGG
Sbjct: 1 MLPTVVLVGRPNVGKSTLFNRLTKSRDALVADLPGLTRDRHYGRGIGASQPYLVVDTGGF 60
Query: 222 LNVSKSQPN----IMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVII 277
+PN I++ +A+ T + AI+E+ VII
Sbjct: 61 ------EPNTDSGILKAMAVQTLL---------------------------AIDEADVII 87
Query: 278 FLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPI 336
FLVDG+ G T D EIA+ LR++ ++LAVNK E K ++ +EF LG PL I
Sbjct: 88 FLVDGRQGATPQDMEIANRLRRSKCP--VLLAVNKTEGMNKAVVS-AEFHELGLGDPLSI 144
Query: 337 SAISGTGTGELLDLVCSELKKVE 359
S+ G G +++DL +VE
Sbjct: 145 SSAHGEGVKDIIDLALESFHEVE 167
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 73/153 (47%), Gaps = 29/153 (18%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
+P+VAIVGRPNVGKS L N L+G R I DEPG TRD + + L+DT GV
Sbjct: 179 IPKVAIVGRPNVGKSTLVNALLGEERVIAFDEPGTTRDSISIDLEKNGKHYTLIDTAGVR 238
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ I E ++ TI +IEE+ V+I +VD
Sbjct: 239 KRGRVLEAI-EKFSVIKTI--------------------------QSIEEANVVILVVDA 271
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCES 315
Q G+T D +A ++ + +++A+NK +
Sbjct: 272 QEGITEQDAHVAAYILD--AGRALVVAINKWDG 302
>gi|288575053|ref|ZP_06393410.1| small GTP-binding protein [Dethiosulfovibrio peptidovorans DSM
11002]
gi|288570794|gb|EFC92351.1| small GTP-binding protein [Dethiosulfovibrio peptidovorans DSM
11002]
Length = 444
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 109/191 (57%), Gaps = 32/191 (16%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
V IVGRPNVGKS+LFNRL+G RAIV D PGVTRDR+YG+ W + F LVDTGG+L
Sbjct: 4 VTIVGRPNVGKSSLFNRLIGERRAIVDDVPGVTRDRLYGQVEWRGNSFYLVDTGGLL--L 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+ + IME GM+G Q A+EES VI+ VDG+ G
Sbjct: 62 RDEDPIME--------GMKG-------------------QIVQAMEESDVILLSVDGREG 94
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP-LPISAISGTGT 344
LT DE+IA +RK+ K +I+ VNK + + + V E + LGF + ISAI G
Sbjct: 95 LTWMDEDIAMVIRKS-APKPVIVVVNKLDDMKFDEL-VYEAYGLGFQDVVGISAIHARGI 152
Query: 345 GELLDLVCSEL 355
+LLD VC L
Sbjct: 153 DDLLDRVCELL 163
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 76/151 (50%), Gaps = 30/151 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+VA+VGRPNVGKS++ NRL+G NR++V D PG TRD + + + L+DT G+
Sbjct: 177 KVALVGRPNVGKSSILNRLLGENRSLVSDVPGTTRDSIDSLMELDDGRKLRLIDTAGLRR 236
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
S+ + +I E + T+ +I+ S V I +VD
Sbjct: 237 KSRFKDDI-EYYSFVRTM--------------------------ESIDRSDVSILVVDAV 269
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
G+T D+++A + + K I+L +NK +
Sbjct: 270 EGVTDQDKKLASSIVER--GKGIVLVMNKWD 298
>gi|227903851|ref|ZP_04021656.1| GTP-binding protein EngA [Lactobacillus acidophilus ATCC 4796]
gi|227868738|gb|EEJ76159.1| GTP-binding protein EngA [Lactobacillus acidophilus ATCC 4796]
Length = 435
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 108/195 (55%), Gaps = 34/195 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVG+PNVGKS LFNR++ AIV D+PGVTRDR Y ++ W H+F L+DTGG
Sbjct: 2 VLPVVAIVGQPNVGKSTLFNRIINQRLAIVEDKPGVTRDRNYAQAEWMGHKFDLIDTGG- 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
I EG ++ I QA AIEE+ VI+ L +
Sbjct: 61 -------------------ITWEG----------GKIEDEIRAQAEIAIEEADVIVMLTN 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
+T DE IA L + K +ILAVNK ++P + + +F+SLG P+P+S+
Sbjct: 92 VVNHVTDLDERIARLLYRT--KKPVILAVNKADNPEQR-NDIYDFYSLGLGDPIPVSSSH 148
Query: 341 GTGTGELLDLVCSEL 355
GTG G+LLD + ++
Sbjct: 149 GTGIGDLLDEIVNDF 163
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 98/201 (48%), Gaps = 42/201 (20%)
Query: 167 AIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSK 226
+++GRPNVGKS+L N+L+G +R IV +E G TRD + +F +VDT G+ +
Sbjct: 178 SMIGRPNVGKSSLVNKLLGEDRVIVANEEGTTRDAVDTPFTKDGIKFKVVDTAGI----R 233
Query: 227 SQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGL 286
+ + E T + +V R A +AIE S V++ ++D G+
Sbjct: 234 RRGKVYE---------------KTEKYSVLR--------AMSAIERSDVVLLVLDASTGI 270
Query: 287 TAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSP-LPIS 337
D+ +A + + + II+ VNK + P K SEF L ++P L +S
Sbjct: 271 REQDKHVAGYAHE--AGRGIIIVVNKWDLPEKNSTSAKEFEREIRSEFQYLDYAPILFVS 328
Query: 338 AISGTGTGELLDLVCSELKKV 358
A TG+ +D + S +K+V
Sbjct: 329 A----KTGQRIDQIPSMVKEV 345
>gi|147677944|ref|YP_001212159.1| GTP-binding protein EngA [Pelotomaculum thermopropionicum SI]
gi|189037152|sp|A5D1U6.1|DER_PELTS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|146274041|dbj|BAF59790.1| predicted GTPase [Pelotomaculum thermopropionicum SI]
Length = 440
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 102/193 (52%), Gaps = 33/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNR+VG AIV EPGVTRDR+Y + W F LVDTGG L+
Sbjct: 4 PVVAIVGRPNVGKSTLFNRIVGNRVAIVEGEPGVTRDRLYQDAEWSGRSFTLVDTGG-LD 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+S I + RQA AI E+ ++ +VD +
Sbjct: 63 FKESDEII----------------------------QGVRRQAEIAIREADAVLLVVDAK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
AGL DEE+A +R+ +K +L NK E + Q+ +F+ LG PLP+SA G
Sbjct: 95 AGLNPGDEEVASIIRR--AEKPALLVANKVEK-FDSLEQIYDFYRLGLGDPLPVSAAEGL 151
Query: 343 GTGELLDLVCSEL 355
TG+LLD + L
Sbjct: 152 NTGDLLDRLVEML 164
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 91/196 (46%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++A++GRPNVGKS+L N ++G R IV + PG TRD + ++++DT G+
Sbjct: 178 KIAVIGRPNVGKSSLVNLILGEERVIVSNVPGTTRDAIDTPFEANGRHYVIIDTAGMRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
S+ I T + V R A AI+ S V++ ++D
Sbjct: 238 SR-------------------IDRPTEKYGVIR--------ALRAIDRSDVVLVVLDAVE 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS--------LGFSPLPI 336
G+T D+ IA + + K ++ VNK + K ++ + + +SPL
Sbjct: 271 GVTDQDKRIAGYAHE--AGKASVIVVNKWDLVEKDGHTMNRYTEKIREELAFMHYSPLLF 328
Query: 337 -SAISGTGTGELLDLV 351
SA +G G++++LV
Sbjct: 329 TSAATGKRVGKIMELV 344
>gi|59711240|ref|YP_204016.1| GTP-binding protein EngA [Vibrio fischeri ES114]
gi|197336109|ref|YP_002155390.1| GTP-binding protein EngA [Vibrio fischeri MJ11]
gi|81311005|sp|Q5E768.1|DER_VIBF1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|238690264|sp|B5FAX6.1|DER_VIBFM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|59479341|gb|AAW85128.1| predicted GTP-binding protein [Vibrio fischeri ES114]
gi|197317599|gb|ACH67046.1| ribosome-associated GTPase EngA [Vibrio fischeri MJ11]
Length = 500
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/196 (41%), Positives = 108/196 (55%), Gaps = 40/196 (20%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YGR+ E EF+L+DTGG+
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAKLEEQEFILIDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
T G+E + + Q+ AAIEE+ V++F+VD
Sbjct: 61 DG---------------TEQGVE---------------TKMAEQSLAAIEEADVVLFMVD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSPL-PIS 337
G+AGLT+ADE IA LR +K L VNK + GI +EFW LG + + I+
Sbjct: 91 GRAGLTSADEAIAKHLRSR--EKPTFLVVNKID----GIDADAASAEFWQLGMNKVYQIA 144
Query: 338 AISGTGTGELLDLVCS 353
A G G LL+L +
Sbjct: 145 ASHGRGVTSLLELALA 160
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 90/194 (46%), Gaps = 36/194 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS L NR++G R +V D PG TRD +Y E++L+DT GV
Sbjct: 212 KLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMEREGQEYVLIDTAGVRRR 271
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + E ++ T+ A+E++ V++ ++D +
Sbjct: 272 GRINETV-EKFSVIKTL--------------------------KAVEDANVVLLVIDARE 304
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQ--VSEF-WSLGFSPLP----IS 337
++ D + + + +++AVNK + + + SE LGF IS
Sbjct: 305 NISDQDLSLLGFALN--AGRSLVIAVNKWDGLDNDVKEKVKSELDRRLGFVDFARIHFIS 362
Query: 338 AISGTGTGELLDLV 351
A+ GTG G L + V
Sbjct: 363 ALHGTGVGHLYESV 376
>gi|374597097|ref|ZP_09670101.1| GTP-binding protein engA [Gillisia limnaea DSM 15749]
gi|373871736|gb|EHQ03734.1| GTP-binding protein engA [Gillisia limnaea DSM 15749]
Length = 435
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 105/185 (56%), Gaps = 33/185 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS FNRL+ AIV GVTRDR YG+S W F L+DTGG +
Sbjct: 5 VAIVGRPNVGKSTFFNRLIQRREAIVDAVSGVTRDRHYGKSDWNGQTFSLIDTGGYV--- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
K ++ E + I++Q AI+E+ IIF+VD ++G
Sbjct: 62 KGSDDVFE--------------------------AEIDKQVELAIDEADAIIFMVDVESG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP-LPISAISGTGT 344
+T DE++A LRK ++K + L VNK ++ ++ + EF+SLG PI++ SG+GT
Sbjct: 96 ITGMDEDVATLLRK--IEKPVFLVVNKVDNAKR-LENAVEFYSLGLGDYFPIASTSGSGT 152
Query: 345 GELLD 349
GELLD
Sbjct: 153 GELLD 157
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 68/150 (45%), Gaps = 29/150 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R A+VGRPN GKS+ N L+G +R IV D G TRD + + EF LVDT G+
Sbjct: 176 RFAVVGRPNAGKSSFINALIGEDRYIVHDVAGTTRDSIDTKYDRFGFEFNLVDTAGIRRK 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK + EDL + + ++ AIE S V + ++D
Sbjct: 236 SK----VKEDLEFYSVM-----------------------RSVRAIENSDVCLIILDATR 268
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCE 314
G + I WL + K I++ VNK +
Sbjct: 269 GFDGQVQNIF-WLAQRNR-KGIVILVNKWD 296
>gi|257093699|ref|YP_003167340.1| GTP-binding protein EngA [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
gi|257046223|gb|ACV35411.1| small GTP-binding protein [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 492
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 108/193 (55%), Gaps = 36/193 (18%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+ +VGRPNVGKS LFNRL A+V D PG+TRDR YG G ++++DTGG ++
Sbjct: 5 IVLVGRPNVGKSTLFNRLTRTRDALVADLPGLTRDRHYGHGKLGSKPYLVIDTGGFEPLA 64
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
K IM +A RQ AI+E+ V+I +VDG++G
Sbjct: 65 KD--GIMYHMA---------------------------RQTEQAIDEADVVILVVDGRSG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
LTA D+EIA+ LRK +D+ +++AVNK E G++ VS+F LG PL ISA G G
Sbjct: 96 LTALDKEIANRLRK--VDRPVLVAVNKSEGMSVGVV-VSDFHELGLGEPLAISAAHGEGV 152
Query: 345 GELLDLV---CSE 354
L+DL C+E
Sbjct: 153 RALIDLALEPCAE 165
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 78/157 (49%), Gaps = 29/157 (18%)
Query: 159 PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDT 218
PE + +VAIVGRPNVGKS L N L+G +R I D+PG TRD + G ++ L+DT
Sbjct: 171 PESDVVKVAIVGRPNVGKSTLINALLGEDRVIAFDQPGTTRDAIEVDFERGGKKYTLIDT 230
Query: 219 GGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIF 278
G+ + I E ++ T+ A+E++ V+I
Sbjct: 231 AGLRRRGRVFETI-EKFSVIKTL--------------------------QAVEDAQVVIL 263
Query: 279 LVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCES 315
++D + + D IA ++R++ + +++AVNK +
Sbjct: 264 VLDARQDIAEQDAHIAAFIRES--GRALVVAVNKWDG 298
>gi|108804275|ref|YP_644212.1| small GTP-binding protein domain-containing protein [Rubrobacter
xylanophilus DSM 9941]
gi|108765518|gb|ABG04400.1| Small GTP-binding protein domain [Rubrobacter xylanophilus DSM
9941]
Length = 437
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 109/192 (56%), Gaps = 33/192 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA+VG PNVGKS+L NR++G RA+V +EPG TRDR Y R+ W EF+LVDTGG+
Sbjct: 7 LPVVAVVGAPNVGKSSLVNRILGRRRAVVAEEPGTTRDRGYARAEWAGREFLLVDTGGM- 65
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+P + +G+E +++ QA A+EE+ VI+ L D
Sbjct: 66 -----EP--------SARMGLE---------------ALVTLQARIAVEEADVIVHLTDA 97
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLG-FSPLPISAISG 341
+ G T AD IA L ++ + ++LAVNK + P + F+SLG P P+SA+ G
Sbjct: 98 RTGPTEADAAIARELLRSRAE--VVLAVNKLDDP-ADESERYRFYSLGEGEPHPVSALHG 154
Query: 342 TGTGELLDLVCS 353
G G+LLD V +
Sbjct: 155 LGVGDLLDEVVA 166
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 83/194 (42%), Gaps = 41/194 (21%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSF----WGEHEFMLVDTGGV 221
+AI+GRPNVGKS L NRL+G RA+V + G T D + G F L+DT GV
Sbjct: 182 IAIIGRPNVGKSTLLNRLLGEQRAVVSEAAGTTTDVVESEVEVQLDGGRERFALLDTAGV 241
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPL--ATREAAVARMPSMIERQATAAIEESCVIIFL 279
T +G+P A R A AI S V + +
Sbjct: 242 GK---------------RTHRAQGVPYYSALRTA--------------EAIRRSSVALLV 272
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----LGFSPL 334
VD GL A D ++A + + ++L P + + +V E + L L
Sbjct: 273 VDAAEGLVAGDLQLARQVEEAGRSLGVLLNKRDLVPPER-LREVQEQAAARLPDLKPPVL 331
Query: 335 PISAISGTGTGELL 348
+SA++G G GE+L
Sbjct: 332 GVSALTGAGVGEVL 345
>gi|166030917|ref|ZP_02233746.1| hypothetical protein DORFOR_00598 [Dorea formicigenerans ATCC
27755]
gi|346306527|ref|ZP_08848683.1| GTP-binding protein engA [Dorea formicigenerans 4_6_53AFAA]
gi|166029184|gb|EDR47941.1| ribosome biogenesis GTPase Der [Dorea formicigenerans ATCC 27755]
gi|345897901|gb|EGX67798.1| GTP-binding protein engA [Dorea formicigenerans 4_6_53AFAA]
Length = 442
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 105/193 (54%), Gaps = 32/193 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN L G +IV D PGVTRDR+Y W + +F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTLFNALAGEKISIVKDTPGVTRDRIYADVSWLDKDFTLIDTGGIEP 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
SK D+ + S + QA AI+ S VIIF+ D +
Sbjct: 64 ESK-------DIIL----------------------SQMREQAQIAIDTSDVIIFITDVK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL +D ++AD LR++ K +IL VNK ++ K + EF++LG P+PISA S
Sbjct: 95 QGLVDSDSKVADMLRRS--GKPVILVVNKVDNFDKYMADTYEFYNLGIGDPVPISASSRL 152
Query: 343 GTGELLDLVCSEL 355
G G++LD V
Sbjct: 153 GLGDMLDKVIEHF 165
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 105/230 (45%), Gaps = 47/230 (20%)
Query: 154 TIGNVPEHL-------LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRS 206
I + PEH PRVAIVG+PNVGKS++ N+L+G R IV D G TRD +
Sbjct: 161 VIEHFPEHAGEEEEDSRPRVAIVGKPNVGKSSIINKLLGEQRVIVSDIAGTTRDAIDTEI 220
Query: 207 FWGEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQA 266
E++ +DT G+ + + I E+L + I +
Sbjct: 221 VHNGKEYVFIDTAGL----RRKNKIKEELERYSII-----------------------RT 253
Query: 267 TAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
A+E + V++ ++D G+T D ++A + K +I+ VNK ++ K + E+
Sbjct: 254 VTAVERADVVLVVIDATQGVTEQDAKVAGIAHER--GKGVIIVVNKWDAIEKNDKTMREY 311
Query: 327 WS-----LGFSP----LPISAISGTGTGELLDLV--CSELKKVEVCIGFL 365
+ L F P + +SA++G ++ D++ E + + V G L
Sbjct: 312 ENEVRRVLSFMPYAEIMYVSAVTGQRLPKMFDMIDMVIENQTLRVATGVL 361
>gi|89072706|ref|ZP_01159271.1| GTP-binding protein EngA [Photobacterium sp. SKA34]
gi|89051526|gb|EAR56980.1| GTP-binding protein EngA [Photobacterium sp. SKA34]
Length = 500
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 105/192 (54%), Gaps = 40/192 (20%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YGR+ EHEF+++DTGG+
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAELEEHEFIVIDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+G T E +M Q+ AAIEE+ V++FLVD
Sbjct: 61 ----------------------DG----TEEGVETKMAE----QSLAAIEEADVVLFLVD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSPL-PIS 337
G+AGLTAADE IA LR +K L VNK + GI +EFW LG + I+
Sbjct: 91 GRAGLTAADEAIAKHLRSR--EKPTFLVVNKVD----GIDADSACAEFWRLGVDAMYQIA 144
Query: 338 AISGTGTGELLD 349
A G L++
Sbjct: 145 ATQNRGVTALME 156
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 36/195 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS L NR++G R +V D PG TRD +Y E++L+DT G+
Sbjct: 213 KLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGQEYVLIDTAGIRR- 271
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K+ +E ++ T+ A+E++ V++ ++D +
Sbjct: 272 RKNMHQAVEKFSVIQTL--------------------------KAVEDANVVLLIIDARE 305
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQ--VSEF-WSLGFSPLP----IS 337
++ D + + + +++AVNK + + + SE LGF IS
Sbjct: 306 NISDQDLSLLGFALN--AGRSLVIAVNKWDGLDNEVKERVKSELDRRLGFVDFARIHFIS 363
Query: 338 AISGTGTGELLDLVC 352
A+ GTG G L + V
Sbjct: 364 ALHGTGVGHLYESVI 378
>gi|336064889|ref|YP_004559748.1| GTP-binding protein [Streptococcus pasteurianus ATCC 43144]
gi|334283089|dbj|BAK30662.1| GTP-binding protein [Streptococcus pasteurianus ATCC 43144]
Length = 436
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 105/194 (54%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTTGEWLNRKFSLIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE ++ L + +K +IL VNK ++P + +F+SLG P P+S++ G
Sbjct: 93 KEGVTDADEYVSKILYRT--NKPVILVVNKVDNPEMR-SDIYDFYSLGLGDPYPVSSVHG 149
Query: 342 TGTGELLDLVCSEL 355
GTG++LD + L
Sbjct: 150 IGTGDVLDAIVENL 163
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 99/221 (44%), Gaps = 43/221 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G R I G TRD + E E+ ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEERVIASPIAGTTRDAIDTNFTDSEGQEYTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R + AI+ S +++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------SMRAIDRSDIVLMVINAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSPLP 335
G+ D+ IA + + K II+ VNK ++ K V +F L ++P+
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGIIIVVNKWDTIEKDNHTVVKWEEDIRDQFQFLSYAPIV 326
Query: 336 -ISAISGTGTGELLDLV----CSELKKVEVCIGFLLICNAI 371
+SA + +L D++ S+ K++ + +I +AI
Sbjct: 327 FVSAATKQRLNKLPDMIKKISASQNKRIPSAVLNDVIMDAI 367
>gi|398813287|ref|ZP_10571986.1| ribosome-associated GTPase EngA [Brevibacillus sp. BC25]
gi|398038948|gb|EJL32094.1| ribosome-associated GTPase EngA [Brevibacillus sp. BC25]
Length = 437
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 103/194 (53%), Gaps = 33/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS +FNRL+G AIV D PGVTRDR+YG+ W H F ++DTGG
Sbjct: 3 LPVVAIVGRPNVGKSTIFNRLIGQRVAIVEDMPGVTRDRLYGKGEWLTHTFHVIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I + + +M QA AI+E+ VII + D
Sbjct: 61 -----------------------IEFGETDEILTQM----RYQAELAIDEADVIIMIADS 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T AD E++ L N K ++LAVNK ++P + +F+SLG P P+S G
Sbjct: 94 RTGVTDADVELSRML--NRTGKPVVLAVNKADNPEMR-ADIYDFYSLGLGEPFPVSGSHG 150
Query: 342 TGTGELLDLVCSEL 355
G G++L+ V
Sbjct: 151 LGLGDMLEDVVQHF 164
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 88/178 (49%), Gaps = 37/178 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
RV+I+GRPNVGKS+L N L+G R IV D G TRD + + ++LVDT G+
Sbjct: 178 RVSIIGRPNVGKSSLTNALLGEERVIVSDVAGTTRDAIDTPFERDDQSYILVDTAGM--- 234
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E T + +V R A +IE+S V++ ++DG+
Sbjct: 235 -RKRGKVYE---------------TTEKYSVMR--------AMRSIEDSDVVLVVIDGEE 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRK--GIMQ------VSEFWSLGFSPL 334
G+ D++IA + + + +I+ VNK ++ K MQ EF L ++P+
Sbjct: 271 GIIEQDKKIAGYAHE--AGRGVIIIVNKWDAVEKDDKTMQRFTELIREEFKYLHYAPI 326
>gi|288906012|ref|YP_003431234.1| GTP-binding protein [Streptococcus gallolyticus UCN34]
gi|386338454|ref|YP_006034623.1| GTP-binding protein [Streptococcus gallolyticus subsp. gallolyticus
ATCC 43143]
gi|288732738|emb|CBI14312.1| putative GTP-binding protein [Streptococcus gallolyticus UCN34]
gi|334281090|dbj|BAK28664.1| GTP-binding protein [Streptococcus gallolyticus subsp. gallolyticus
ATCC 43143]
Length = 436
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 105/194 (54%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTTGEWLNRKFSLIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE ++ L + +K +IL VNK ++P + +F+SLG P P+S++ G
Sbjct: 93 KEGVTDADEYVSKILYRT--NKPVILVVNKVDNPEMR-SDIYDFYSLGLGDPYPVSSVHG 149
Query: 342 TGTGELLDLVCSEL 355
GTG++LD + L
Sbjct: 150 IGTGDVLDAIVENL 163
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 100/221 (45%), Gaps = 43/221 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G R I G TRD + E E+ ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEERVIASPIAGTTRDAIDTNFTDSEGQEYTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R + AI+ S +++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------SMRAIDRSDIVLMVINAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPLP 335
G+ D+ IA + + K II+ VNK ++ K V+ +F L ++P+
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGIIIVVNKWDTIEKDNHTVAKWEEDIRDQFQFLSYAPII 326
Query: 336 -ISAISGTGTGELLDLV----CSELKKVEVCIGFLLICNAI 371
+SA + +L D++ S+ K++ + +I +AI
Sbjct: 327 FVSAATKQRLNKLPDMIKKISVSQNKRIPSAVLNDVIMDAI 367
>gi|163856334|ref|YP_001630632.1| GTP-binding protein EngA [Bordetella petrii DSM 12804]
gi|229710727|sp|A9IK66.1|DER_BORPD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|163260062|emb|CAP42363.1| putative GTP-binding protein [Bordetella petrii]
Length = 451
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/197 (40%), Positives = 106/197 (53%), Gaps = 32/197 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFNRL A+V D G+TRDR YG G+ F+++DTGG
Sbjct: 5 PVVALVGRPNVGKSTLFNRLTRSRAALVADYSGLTRDRHYGEGRVGDTPFIVIDTGGFEP 64
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
V+K+ I+ ++A RQ AI E+ V++FLVD +
Sbjct: 65 VAKT--GILREMA---------------------------RQTRQAIAEADVVVFLVDAR 95
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGT 342
AG+ A D EIA LRK+ + ++LAVNK E G SEF LG +P PISA G
Sbjct: 96 AGVNAHDHEIAQLLRKSGQQR-VVLAVNKAEGMGVG-NATSEFHELGLGTPYPISAAHGD 153
Query: 343 GTGELLDLVCSELKKVE 359
G +L+ L +L + E
Sbjct: 154 GIVDLIGLALQDLVEPE 170
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 89/201 (44%), Gaps = 37/201 (18%)
Query: 159 PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDT 218
P+H + ++AIVGRPNVGKS L N L+G R I D PG TRD + ++ L+DT
Sbjct: 182 PDHRI-KLAIVGRPNVGKSTLINTLLGEERVIAFDLPGTTRDAIEIDFERDGRKYTLIDT 240
Query: 219 GGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIF 278
G+ K + E ++ T+ AIE S V++
Sbjct: 241 AGLRRRGKVFEAV-EKFSVIKTL--------------------------QAIEASNVVLL 273
Query: 279 LVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKC------ESPRKGIMQVSEFWSLGFS 332
++D Q ++ D IA ++ + + +++A+NK + R + L F+
Sbjct: 274 MLDAQTEVSEQDAHIAGFVLET--GRAVVVAINKWDGLDIDQRERIEREFRRKLRFLSFA 331
Query: 333 PL-PISAISGTGTGELLDLVC 352
P ISA+ G G +L V
Sbjct: 332 PTHTISALKGQGIKPVLKSVV 352
>gi|408673179|ref|YP_006872927.1| GTP-binding protein engA [Emticicia oligotrophica DSM 17448]
gi|387854803|gb|AFK02900.1| GTP-binding protein engA [Emticicia oligotrophica DSM 17448]
Length = 436
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 103/192 (53%), Gaps = 34/192 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRL+ AI + PGVTRDR YG + W E F ++DTGG +
Sbjct: 5 VAIVGRPNVGKSTLFNRLIESRVAITDNMPGVTRDRHYGHAVWTEKYFTVIDTGGYV--- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+G E T E A I Q AI+ES V++F+VD G
Sbjct: 62 ---------------VGSED----TFEGA-------IREQVEIAIDESSVVLFVVDTMTG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP--LPISAISGTG 343
LT D+E A+ LR++ K + +A NK E+ + +EF+ LG PIS G+G
Sbjct: 96 LTDLDKEFANILRRS--KKPVFVAANKAETFERH-QTAAEFYELGLGDEVFPISGADGSG 152
Query: 344 TGELLDLVCSEL 355
TGELLD + ++
Sbjct: 153 TGELLDAIVAKF 164
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 75/162 (46%), Gaps = 41/162 (25%)
Query: 159 PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRD------RMYGRSFWGEHE 212
P +PR+AI+GRPNVGKS+ N L G +R+IV + G TRD R+YG+ +
Sbjct: 172 PNEGIPRIAILGRPNVGKSSFLNALTGKDRSIVTNIAGTTRDAIDTHYRLYGK------D 225
Query: 213 FMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEE 272
F+L DT G+ +K NI +T+ ++ A+E
Sbjct: 226 FILTDTAGIRKKAKVHDNI----EFYSTL-----------------------RSIKALEN 258
Query: 273 SCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
S + + L+D GL + D I + K I+L +NK +
Sbjct: 259 SDICVVLLDASQGLESQDVSII--AHAHNAKKGIVLMINKWD 298
>gi|325978979|ref|YP_004288695.1| GTP-binding protein EngA [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|325178907|emb|CBZ48951.1| GTP-binding protein EngA [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
Length = 436
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 105/194 (54%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTTGEWLNRKFSLIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE ++ L + +K +IL VNK ++P + +F+SLG P P+S++ G
Sbjct: 93 KEGVTDADEYVSKILYRT--NKPVILVVNKVDNPEMR-SDIYDFYSLGLGDPYPVSSVHG 149
Query: 342 TGTGELLDLVCSEL 355
GTG++LD + L
Sbjct: 150 IGTGDVLDAIVENL 163
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 99/221 (44%), Gaps = 43/221 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G R I G TRD + E E+ ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEERVIASPIAGTTRDAIDTNFTDSEGQEYTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R + AI+ S +++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------SMRAIDRSDIVLMVINAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSPLP 335
G+ D+ IA + + K II+ VNK ++ K V +F L ++P+
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGIIIVVNKWDTIEKDNHTVVKWEEDIRDQFQFLSYAPII 326
Query: 336 -ISAISGTGTGELLDLV----CSELKKVEVCIGFLLICNAI 371
+SA + +L D++ S+ K++ + +I +AI
Sbjct: 327 FVSAATKQRLNKLPDMIKKISASQNKRIPSAVLNDVIMDAI 367
>gi|306834169|ref|ZP_07467289.1| ribosome-associated GTPase EngA [Streptococcus bovis ATCC 700338]
gi|304423742|gb|EFM26888.1| ribosome-associated GTPase EngA [Streptococcus bovis ATCC 700338]
Length = 436
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 105/194 (54%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTTGEWLNRKFSLIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE ++ L + +K +IL VNK ++P + +F+SLG P P+S++ G
Sbjct: 93 KEGVTDADEYVSKILYRT--NKPVILVVNKVDNPEMR-SDIYDFYSLGLGDPYPVSSVHG 149
Query: 342 TGTGELLDLVCSEL 355
GTG++LD + L
Sbjct: 150 IGTGDVLDAIVENL 163
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 100/222 (45%), Gaps = 45/222 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
+ +++GRPNVGKS+L N ++G R I G TRD + +F E+ ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEERVIASPIAGTTRDAI-DTNFTDSDGQEYTMIDTAGMR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R + AI+ S +++ +++
Sbjct: 235 KSGKVYEN-------------------TEKYSVMR--------SMRAIDRSDIVLMVINA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSPL 334
+ G+ D+ IA + + K II+ VNK ++ K V +F L ++P+
Sbjct: 268 EEGIREYDKRIAGFAHE--AGKGIIIVVNKWDTIEKDNHTVVKWEEDIRDQFQFLSYAPI 325
Query: 335 P-ISAISGTGTGELLDLV----CSELKKVEVCIGFLLICNAI 371
+SA + +L D++ S+ K++ + +I +AI
Sbjct: 326 VFVSAATKQRLNKLPDMIKKISASQNKRIPSAVLNDVIMDAI 367
>gi|171780272|ref|ZP_02921176.1| hypothetical protein STRINF_02060 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171281620|gb|EDT47055.1| ribosome biogenesis GTPase Der [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 437
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 105/194 (54%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTTGEWLNRKFSLIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE ++ L + +K +IL VNK ++P + +F+SLG P P+S++ G
Sbjct: 93 KEGVTDADEYVSKILYRT--NKPVILVVNKVDNPEMR-NDIYDFYSLGLGDPYPVSSVHG 149
Query: 342 TGTGELLDLVCSEL 355
GTG++LD + L
Sbjct: 150 IGTGDVLDAIVENL 163
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 80/179 (44%), Gaps = 38/179 (21%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G R I G TRD + E E+ ++DT G+
Sbjct: 177 KFSLIGRPNVGKSSLINAILGEERVIASPIAGTTRDAIDTNFTDSEGQEYTMIDTAGMRK 236
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R + AI+ S +++ +++ +
Sbjct: 237 SGKVYEN-------------------TEKYSVMR--------SMRAIDRSDIVLMVINAE 269
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPL 334
G+ D+ IA + + K II+ VNK ++ K V+ +F L ++P+
Sbjct: 270 EGIREYDKRIAGFAHE--AGKGIIIVVNKWDTIEKDNHTVAKWEEDIRDQFQFLSYAPI 326
>gi|85057761|ref|YP_456677.1| GTP-binding protein EngA [Aster yellows witches'-broom phytoplasma
AYWB]
gi|84789866|gb|ABC65598.1| GTP-binding protein [Aster yellows witches'-broom phytoplasma AYWB]
Length = 479
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 105/193 (54%), Gaps = 34/193 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVGRPNVGKS+LFNR++G AI + G+TRDR+Y + W F ++DTGG+
Sbjct: 4 KIAIVGRPNVGKSSLFNRIIGKRHAITHQKKGITRDRIYATAHWLTKTFGVIDTGGI--- 60
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
I +T +E I + QA A++E+ VI+F+VDGQ
Sbjct: 61 -----------EIKSTPFLEQIKI----------------QAQLAVDEADVIVFVVDGQI 93
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGTG 343
GLT D +A L K K +ILAVNK ++ + EF++LGF +P IS G G
Sbjct: 94 GLTQNDSYLAKLLYKT--KKPVILAVNKIDN-HNLLFNTYEFYALGFDTPFAISTQHGVG 150
Query: 344 TGELLDLVCSELK 356
G+LLD + L+
Sbjct: 151 IGDLLDKIVFLLR 163
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 78/169 (46%), Gaps = 33/169 (19%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVD 217
E+ + + +VGRPNVGKS L N L+ R IV D G T D + +F+ ++ ++D
Sbjct: 212 ENKIIKFCVVGRPNVGKSTLTNSLLASQRMIVSDMAGTTTDAV--DTFFENDGQKYQIID 269
Query: 218 TGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVII 277
T G+ K + I E +E + + +A A+E++ +
Sbjct: 270 TAGI----KKRGKIYE-----------------QEDKYSFL------RALGALEKADIAC 302
Query: 278 FLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
++D + G+ D+ IA ++ +NY K I+ VNK + K + F
Sbjct: 303 LVLDAKEGILEQDKNIAGFILENY--KACIIIVNKWDLLEKDTNTLKNF 349
>gi|345882257|ref|ZP_08833762.1| GTP-binding protein engA [Prevotella oulorum F0390]
gi|343918013|gb|EGV28785.1| GTP-binding protein engA [Prevotella oulorum F0390]
Length = 437
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 103/192 (53%), Gaps = 35/192 (18%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGG-VLNV 224
VAIVGRPNVGKS LFNRL RAIV D G TRDR YG+ W EF +VDTGG V+N
Sbjct: 5 VAIVGRPNVGKSTLFNRLTQSRRAIVSDTAGTTRDRQYGKCSWNGKEFSVVDTGGWVVN- 63
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
++ ED I RQ A EE+ +++FLVD
Sbjct: 64 ---SDDVFED--------------------------AIRRQVLVATEEADLVLFLVDVTT 94
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTG 343
G+T DE++A LR+ + +IL NK ++ Q +EF+ LG P +SA +G G
Sbjct: 95 GVTDWDEDVATILRRTKLP--VILVANKVDNS-ADYYQAAEFYRLGLGDPQCVSAATGGG 151
Query: 344 TGELLDLVCSEL 355
TG+LLDL+ +L
Sbjct: 152 TGDLLDLIIGKL 163
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 80/167 (47%), Gaps = 36/167 (21%)
Query: 155 IGNVP-------EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSF 207
IG +P E +PR A+VGRPN GKS++ N +G +R IV + G TRD +Y R
Sbjct: 160 IGKLPQENPETIEDDIPRFAVVGRPNAGKSSIINAFIGEDRNIVTEIAGTTRDSIYTRFD 219
Query: 208 WGEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQAT 267
+F LVDT G+ + + + EDL + + ++
Sbjct: 220 KFGFDFYLVDTAGI----RRKNKVNEDLEFYSVM-----------------------RSI 252
Query: 268 AAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
AIE S V I ++D G+ A D I ++KN +K +++ VNK +
Sbjct: 253 RAIENSDVCILMLDATRGVEAQDMNIFQLIQKN--NKSLVVVVNKWD 297
>gi|291613885|ref|YP_003524042.1| ribosome-associated GTPase EngA [Sideroxydans lithotrophicus ES-1]
gi|291583997|gb|ADE11655.1| ribosome-associated GTPase EngA [Sideroxydans lithotrophicus ES-1]
Length = 465
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 109/200 (54%), Gaps = 33/200 (16%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP + +VGRPNVGKS LFNRL A+V D PG+TRDR YGR GE +++VDTGG+
Sbjct: 1 MLPTLVLVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGRGRVGERPYLVVDTGGL 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
V+K IM ++A +Q A++E+ +++F+VD
Sbjct: 61 EPVAKE--GIMHEMA---------------------------KQTRQAVDEADLVLFIVD 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ GLT D IA LRK + ++L VNK E R+ + ++F LG P+PIS+
Sbjct: 92 GRDGLTPQDRIIATQLRKT--GRPVMLLVNKAEGMRRERV-TADFHELGLGEPIPISSAH 148
Query: 341 GTGTGELLDLVCSELKKVEV 360
G E++++ EL EV
Sbjct: 149 GDNVAEMIEVALDELPAAEV 168
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 93/196 (47%), Gaps = 38/196 (19%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P++AIVGRPNVGKS L N ++G R I D+PG TRD +Y ++ ++DT G+
Sbjct: 177 PKLAIVGRPNVGKSTLVNAILGEERVIAFDQPGTTRDSIYIDFERAGRQYTIIDTAGIRR 236
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K I E ++ T+ AIE++ V++ +VD +
Sbjct: 237 RGKIDEAI-EKFSVVKTL--------------------------QAIEDANVVVLVVDAR 269
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKC--------ESPRKGIMQVSEFWSLGFSPLP 335
+T D +AD++ + + ++LAVNK ++ ++ I + F S
Sbjct: 270 DQITEQDAHLADFVLQ--AGRALVLAVNKWDGLDEYKRDTVKRDIERKLHFLSFAKHHF- 326
Query: 336 ISAISGTGTGELLDLV 351
ISA++GTG LL V
Sbjct: 327 ISALNGTGVDALLKSV 342
>gi|320547399|ref|ZP_08041687.1| ribosome-associated GTPase EngA [Streptococcus equinus ATCC 9812]
gi|320447944|gb|EFW88699.1| ribosome-associated GTPase EngA [Streptococcus equinus ATCC 9812]
Length = 436
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 105/194 (54%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTTGEWLNRKFSLIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE ++ L + +K +IL VNK ++P + +F+SLG P P+S++ G
Sbjct: 93 KEGVTDADEYVSKILYRT--NKPVILVVNKVDNPEMR-SDIYDFYSLGLGDPYPVSSVHG 149
Query: 342 TGTGELLDLVCSEL 355
GTG++LD + L
Sbjct: 150 IGTGDVLDAIVENL 163
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 80/179 (44%), Gaps = 38/179 (21%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G R I G TRD + E E+ ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEERVIASPIAGTTRDAIDTNFTDSEGQEYTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R + AI+ S +++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------SMRAIDRSDIVLMVINAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPL 334
G+ D+ IA + + K II+ VNK ++ K V+ +F L ++P+
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGIIIVVNKWDTIEKNNYTVAKWEEDIRDQFQFLSYAPI 325
>gi|410584449|ref|ZP_11321552.1| ribosome-associated GTPase EngA [Thermaerobacter subterraneus DSM
13965]
gi|410504384|gb|EKP93895.1| ribosome-associated GTPase EngA [Thermaerobacter subterraneus DSM
13965]
Length = 454
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 105/193 (54%), Gaps = 34/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNR++ AI D PGVTRDR+Y + W EF LVDTGG+
Sbjct: 3 PVVAIVGRPNVGKSTLFNRIIERRLAIEDDVPGVTRDRLYADTDWAGREFTLVDTGGLAE 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
PL + + RQ AA+ E+ ++I +VDGQ
Sbjct: 63 GDD--------------------PLTVQ----------VRRQVEAAVREADLLIMVVDGQ 92
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
AG+T ADEE+A LR++ K ILAVNK + R +Q +F+ LG P+P++A G
Sbjct: 93 AGVTPADEEVARLLRQSR--KPTILAVNKVDDARWDGVQY-DFFRLGLGEPIPVAAGPGR 149
Query: 343 GTGELLDLVCSEL 355
G+LLD V L
Sbjct: 150 NVGDLLDAVVRGL 162
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 38/197 (19%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS+L NRL+G R +V D PG TRD + GE F +DT G+ S
Sbjct: 187 VAIVGRPNVGKSSLVNRLLGEERVVVSDIPGTTRDAVDVLWRRGERVFRFIDTAGLRRKS 246
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+ + +D+ +T+ + +A A + +C+++ D +
Sbjct: 247 R----VKDDVEFYSTLRTQ--------------------RALARADVACLVL---DARDP 279
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS--------LGFSPLP-I 336
T D+ IA + + K +LAVNK + KG ++ L F+P+ +
Sbjct: 280 ATEQDKRIAGMILEE--GKACVLAVNKWDLVAKGPDTADQYREALYREYDFLQFAPVVFL 337
Query: 337 SAISGTGTGELLDLVCS 353
SA++G L++++
Sbjct: 338 SALTGQRVDRLVEVLAG 354
>gi|449924353|ref|ZP_21799593.1| GTP-binding protein EngA [Streptococcus mutans 4SM1]
gi|449974093|ref|ZP_21815115.1| GTP-binding protein EngA [Streptococcus mutans 11VS1]
gi|450181614|ref|ZP_21887934.1| GTP-binding protein EngA [Streptococcus mutans 24]
gi|449162939|gb|EMB66058.1| GTP-binding protein EngA [Streptococcus mutans 4SM1]
gi|449178769|gb|EMB81012.1| GTP-binding protein EngA [Streptococcus mutans 11VS1]
gi|449246026|gb|EMC44342.1| GTP-binding protein EngA [Streptococcus mutans 24]
Length = 436
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 107/196 (54%), Gaps = 38/196 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKSALFNR+ G +IV D GVTRDR+Y ++ W +F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSALFNRIAGERISIVEDVEGVTRDRIYTKAEWLNRQFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAI 339
+ +T ADE +A L + + K IILAVNK ++P R I +F++LG P P+S+
Sbjct: 93 KESITDADEYVAKILYRTH--KPIILAVNKVDNPEMRSAIY---DFYALGLGDPYPVSSA 147
Query: 340 SGTGTGELLDLVCSEL 355
G GTG++LD + L
Sbjct: 148 HGIGTGDVLDAIVDNL 163
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 94/198 (47%), Gaps = 41/198 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
+ +++GRPNVGKS+L N ++G +R I G TRD + +F E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAI-DTTFTDEEGQEFTMIDTAGMR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A AI+ S +++ +++
Sbjct: 235 KSGKVYEN-------------------TEKYSVMR--------AMRAIDRSDIVLMVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSE--------FWSLGFSPL 334
+ G+ D+ IA + + K I++ VNK ++ +K V++ F + ++P+
Sbjct: 268 EEGIREYDKRIAGFAHE--AGKGIVVVVNKWDAIKKDNRTVAQWEADIRDNFQYIPYAPI 325
Query: 335 P-ISAISGTGTGELLDLV 351
+SA++ +L D++
Sbjct: 326 VFVSAVTKQRLHKLPDVI 343
>gi|379705869|ref|YP_005204328.1| GTP-binding protein [Streptococcus infantarius subsp. infantarius
CJ18]
gi|374682568|gb|AEZ62857.1| GTP-binding protein [Streptococcus infantarius subsp. infantarius
CJ18]
Length = 436
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 105/194 (54%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTTGEWLNRKFSLIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE ++ L + +K +IL VNK ++P + +F+SLG P P+S++ G
Sbjct: 93 KEGVTDADEYVSKILYRT--NKPVILVVNKVDNPEMR-NDIYDFYSLGLGDPYPVSSVHG 149
Query: 342 TGTGELLDLVCSEL 355
GTG++LD + L
Sbjct: 150 IGTGDVLDAIVENL 163
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 80/179 (44%), Gaps = 38/179 (21%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G R I G TRD + E E+ ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEERVIASPIAGTTRDAIDTNFTDSEGQEYTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R + AI+ S +++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------SMRAIDRSDIVLMVINAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPL 334
G+ D+ IA + + K II+ VNK ++ K V+ +F L ++P+
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGIIIVVNKWDTIEKDNHTVAKWEEDIRDQFQFLSYAPI 325
>gi|423685348|ref|ZP_17660156.1| GTP-binding protein Der [Vibrio fischeri SR5]
gi|371495260|gb|EHN70856.1| GTP-binding protein Der [Vibrio fischeri SR5]
Length = 500
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/196 (41%), Positives = 108/196 (55%), Gaps = 40/196 (20%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YGR+ E EF+L+DTGG+
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAKLEEQEFILIDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
T G+E + + Q+ AAIEE+ V++F+VD
Sbjct: 61 DG---------------TEQGVE---------------TKMAEQSLAAIEEADVVLFMVD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSPL-PIS 337
G+AGLT+ADE IA LR +K L VNK + GI +EFW LG + + I+
Sbjct: 91 GRAGLTSADEAIAKHLRSR--EKPTFLVVNKID----GIDADAASAEFWQLGMNKVYQIA 144
Query: 338 AISGTGTGELLDLVCS 353
A G G LL+L +
Sbjct: 145 ASHGRGVTSLLELALA 160
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 90/194 (46%), Gaps = 36/194 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS L NR++G R +V D PG TRD +Y E++L+DT GV
Sbjct: 212 KLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMEREGQEYVLIDTAGVRRR 271
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + E ++ T+ A+E++ V++ ++D +
Sbjct: 272 GRINETV-EKFSVIKTL--------------------------KAVEDANVVLLVIDARE 304
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQ--VSEF-WSLGFSPLP----IS 337
++ D + + + +++AVNK + + + SE LGF IS
Sbjct: 305 NISDQDLSLLGFALN--AGRSLVIAVNKWDGLDNDVKEKVKSELDRRLGFVDFARIHFIS 362
Query: 338 AISGTGTGELLDLV 351
A+ GTG G L + V
Sbjct: 363 ALHGTGVGHLYESV 376
>gi|306832031|ref|ZP_07465186.1| ribosome-associated GTPase EngA [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|304425957|gb|EFM29074.1| ribosome-associated GTPase EngA [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
Length = 436
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 105/194 (54%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTTGEWLNRKFSLIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V G
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE ++ L + +K +IL VNK ++P + +F+SLG P P+S++ G
Sbjct: 93 KEGVTDADEYVSKILYRT--NKPVILVVNKVDNPEMR-SDIYDFYSLGLGDPYPVSSVHG 149
Query: 342 TGTGELLDLVCSEL 355
GTG++LD + L
Sbjct: 150 IGTGDVLDAIVENL 163
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 100/221 (45%), Gaps = 43/221 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G R I G TRD + E E+ ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEERVIASPIAGTTRDAIDTNFTDSEGQEYTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R + AI+ S +++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------SMRAIDRSDIVLMVINAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPLP 335
G+ D+ IA + + K II+ VNK ++ K V+ +F L ++P+
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGIIIVVNKWDTIEKDNHTVAKWEEDIRDQFQFLSYAPII 326
Query: 336 -ISAISGTGTGELLDLV----CSELKKVEVCIGFLLICNAI 371
+SA + +L D++ S+ K++ + +I +AI
Sbjct: 327 FVSAATKQRLNKLPDMIKKISASQNKRIPSAVLNDVIMDAI 367
>gi|121604778|ref|YP_982107.1| GTP-binding protein EngA [Polaromonas naphthalenivorans CJ2]
gi|166225835|sp|A1VNF8.1|DER_POLNA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|120593747|gb|ABM37186.1| small GTP-binding protein [Polaromonas naphthalenivorans CJ2]
Length = 445
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 106/193 (54%), Gaps = 33/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +A+VGRPNVGKS LFNRL AIV D G+TRDR YG G HE++++DTGG
Sbjct: 3 PVIALVGRPNVGKSTLFNRLTKTRDAIVADFAGLTRDRHYGNGKLGPHEYIVIDTGGF-- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P+ AV + + RQ A+ ES V+IF+VD +
Sbjct: 61 ----EPD-----------------------AVTGIYKEMARQTRQAVAESDVVIFVVDAR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP-LPISAISGT 342
AG++A D +IA++LRK + K +LA NK E +G QVSEF+ LG L +SA G
Sbjct: 94 AGISAQDYDIANYLRK--LGKPTVLAANKAEGLPEG-TQVSEFFELGLGEMLAVSASHGQ 150
Query: 343 GTGELLDLVCSEL 355
G L+DL + L
Sbjct: 151 GMRMLVDLALAPL 163
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 86/188 (45%), Gaps = 36/188 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++A+ GRPNVGKS L N +G R + D PG TRD + +F L+DT G+
Sbjct: 181 KLAVAGRPNVGKSTLINTWLGEERLVAFDLPGTTRDAISVPFEHAGQKFELIDTAGLRRK 240
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K I E ++ T+ AIE + V++ L+D
Sbjct: 241 GKVFEAI-EKFSVVKTL--------------------------QAIENANVVLLLLDATQ 273
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSEFWSLGF----SPLPIS 337
G+T D IA ++ ++ + ++LAVNK ++ ++ ++Q S LGF S IS
Sbjct: 274 GVTDQDAHIAGYILES--GRAVVLAVNKWDAVDAYQRELLQRSIETRLGFLKFASIHHIS 331
Query: 338 AISGTGTG 345
AI G G
Sbjct: 332 AIKRQGLG 339
>gi|160915095|ref|ZP_02077308.1| hypothetical protein EUBDOL_01103 [Eubacterium dolichum DSM 3991]
gi|158432894|gb|EDP11183.1| ribosome biogenesis GTPase Der [Eubacterium dolichum DSM 3991]
Length = 436
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/195 (41%), Positives = 105/195 (53%), Gaps = 38/195 (19%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS +FNR++G ++IV D PGVTRDR+YG++ W EF L+DTGG+
Sbjct: 6 VAIVGRPNVGKSTIFNRIIGERKSIVEDTPGVTRDRIYGKAEWLTKEFRLIDTGGIQ--- 62
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+ED I M Q AIEE+ I+F+V G+ G
Sbjct: 63 ------LEDQDFQQEIQM---------------------QVEIAIEEADAIVFVVSGREG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKC--ESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
+T DE IA L+K +K IILAVNK ES + I EF+ LG P+ +S G
Sbjct: 96 VTRDDEYIARLLQKT--NKKIILAVNKIDDESLQPSIY---EFYQLGVGDPIAVSGSHGI 150
Query: 343 GTGELLDLVCSELKK 357
G G++LD + K
Sbjct: 151 GIGDILDEIVHSFPK 165
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 92/198 (46%), Gaps = 38/198 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
+ R ++GRPNVGKS+L N ++ +R IV + G TRD + +++++DT G+
Sbjct: 174 MTRFCLIGRPNVGKSSLVNAILDQDRVIVSNIEGTTRDAIDTPFTREGKDYVVIDTAGIR 233
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K NI + +V R A +AIE S V++ ++DG
Sbjct: 234 RRGKVYENI-------------------EKYSVLR--------AMSAIERSDVVLVVIDG 266
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQV-----SEFWSLGFSPL 334
+ G+ D+ +A + + K +I+ NK E + ++++ + F L ++P+
Sbjct: 267 ETGIREQDKHVAGYAHE--AGKGVIIVYNKWDAVEKDERTMVKIEKEIYAHFLYLNYAPI 324
Query: 335 P-ISAISGTGTGELLDLV 351
+SA+ LL ++
Sbjct: 325 VFVSALKKQRIHTLLPMI 342
>gi|422321708|ref|ZP_16402753.1| GTP-binding protein engA [Achromobacter xylosoxidans C54]
gi|317403342|gb|EFV83855.1| GTP-binding protein engA [Achromobacter xylosoxidans C54]
Length = 451
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 104/193 (53%), Gaps = 32/193 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFNRL A+V D G+TRDR YG GE F+++DTGG
Sbjct: 5 PVVALVGRPNVGKSTLFNRLTRSRAALVADFSGLTRDRHYGEGRVGEIPFIVIDTGGFEP 64
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
V+K +GI L + RQ AI E+ V++FLVD +
Sbjct: 65 VAK-----------------DGILLE------------MARQTRQAIAEADVVVFLVDAR 95
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGT 342
AGL A D EIA LRK+ + ++LAVNK E G ++EF LG P PISA G
Sbjct: 96 AGLNAHDHEIATLLRKSGQQR-VLLAVNKAEGMGAG-AAIAEFHELGLGQPYPISAAHGD 153
Query: 343 GTGELLDLVCSEL 355
G +L++L +L
Sbjct: 154 GIVDLIELALQDL 166
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 83/195 (42%), Gaps = 38/195 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVGRPNVGKS L N L+G R I D PG TRD + + L+DT G+
Sbjct: 187 KLAIVGRPNVGKSTLINTLMGEERVIAFDMPGTTRDAIEIDFERDGRRYTLIDTAGLRKR 246
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K + E ++ T+ AIE S V++ ++D Q
Sbjct: 247 GKVFEAV-EKFSVIKTL--------------------------QAIEASNVVLLMLDAQT 279
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKC--------ESPRKGIMQVSEFWSLGFSPLPI 336
++ D IA ++ + + +++AVNK E + M+ F S I
Sbjct: 280 EISEQDAHIAGFVLET--GRAVVVAVNKWDGLDGEEKERIEREFMRKLRFLSFA-RVHTI 336
Query: 337 SAISGTGTGELLDLV 351
SA+ G G LL V
Sbjct: 337 SALRGQGIKPLLKSV 351
>gi|325285620|ref|YP_004261410.1| GTP-binding protein engA [Cellulophaga lytica DSM 7489]
gi|324321074|gb|ADY28539.1| GTP-binding protein engA [Cellulophaga lytica DSM 7489]
Length = 434
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/195 (40%), Positives = 110/195 (56%), Gaps = 33/195 (16%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS FNRL+ AIV GVTRDR YG+S W EF L+DTGG +
Sbjct: 5 VAIVGRPNVGKSTFFNRLIQRREAIVDAVSGVTRDRHYGKSDWNGVEFSLIDTGGYV--- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+G E + + I++Q AI+E+ I+F+VD ++G
Sbjct: 62 ---------------LGSEDV-----------FEAEIDKQVELAIDEADAIVFMVDVESG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP-LPISAISGTGT 344
+T DE++A LR+ +DK I L VNK ++ ++ V EF+SLG I++I+G+GT
Sbjct: 96 VTGMDEDVAKLLRR--VDKPIFLVVNKVDNAKRAEDAV-EFYSLGLGDYFTIASINGSGT 152
Query: 345 GELLDLVCSELKKVE 359
G+LLD V L + E
Sbjct: 153 GDLLDAVVKVLPEKE 167
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 70/152 (46%), Gaps = 29/152 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LPR A+VGRPN GKS+ N L+G R IV D G TRD + + EF LVDT G+
Sbjct: 173 LPRFAVVGRPNAGKSSFINALIGEERYIVTDVAGTTRDSIDTKYNRFGFEFNLVDTAGI- 231
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + + EDL + + ++ AIE + V I ++D
Sbjct: 232 ---RRKAKVKEDLEFYSVM-----------------------RSVRAIEHADVCILMLDA 265
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
G E I WL + +K I++ VNK +
Sbjct: 266 TRGFDGQVENIF-WLAQR-NNKGIVILVNKWD 295
>gi|237747713|ref|ZP_04578193.1| GTP-binding protein engA [Oxalobacter formigenes OXCC13]
gi|229379075|gb|EEO29166.1| GTP-binding protein engA [Oxalobacter formigenes OXCC13]
Length = 446
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 103/188 (54%), Gaps = 34/188 (18%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +A+VGRPNVGKS LFNRL A+V D PG+TRDR YG G+ F+++DTGG
Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRAALVADYPGLTRDRHYGEGRMGDRPFLVIDTGGFEP 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
V K +M+++A +Q A+ E+ V+IF+VDG+
Sbjct: 63 VVKE--GVMQEMA---------------------------KQTKQAVAEADVVIFIVDGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS--PLPISAISG 341
G+T D+ I D+LRK+ + +ILAVNK E K V++F+ LG PL IS+ G
Sbjct: 94 QGITPHDKAITDYLRKS--GRPVILAVNKAEG-MKYTAVVADFYELGLGSDPLVISSAHG 150
Query: 342 TGTGELLD 349
G LLD
Sbjct: 151 DGVHTLLD 158
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 94/219 (42%), Gaps = 51/219 (23%)
Query: 137 ETDDRKDSGKKQKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPG 196
ET+D +SG+K K +AIVGRPNVGKS + N L+G R I D PG
Sbjct: 170 ETEDEIESGQKHIK---------------LAIVGRPNVGKSTMINALLGEERVIAFDLPG 214
Query: 197 VTRDRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVA 256
TRD + ++ LVDT G+ K I E ++ T+
Sbjct: 215 TTRDAIEIPFERDGKQYTLVDTAGLRKRGKVFQAI-EKFSVVKTL--------------- 258
Query: 257 RMPSMIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKC--- 313
AI E+ V++ L+D Q ++ D IA ++ ++ + +++ +NK
Sbjct: 259 -----------QAISEANVVLLLMDAQQDISEQDAHIAGFVLES--GRALVVGINKWDGL 305
Query: 314 -ESPRKGIMQVSE--FWSLGFSPLP-ISAISGTGTGELL 348
+ RK I E L F+ +SA+ TG L+
Sbjct: 306 DQDKRKEIKSEVERKLHFLSFAKFHYVSALKSTGISALM 344
>gi|336172731|ref|YP_004579869.1| GTP-binding protein engA [Lacinutrix sp. 5H-3-7-4]
gi|334727303|gb|AEH01441.1| GTP-binding protein engA [Lacinutrix sp. 5H-3-7-4]
Length = 435
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 105/185 (56%), Gaps = 33/185 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS FNRL+ AIV GVTRDR YG+S W EF L+DTGG +
Sbjct: 5 VAIVGRPNVGKSTFFNRLIQRREAIVDAVSGVTRDRHYGKSDWNGKEFSLIDTGGYV--- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
K +I E + I++Q AIEE+ IIF+VD +AG
Sbjct: 62 KGSDDIFE--------------------------AEIDKQVELAIEEADAIIFMVDVEAG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP-LPISAISGTGT 344
+T DE++A LRK + K + L VNK ++ ++ V EF+SLG I++I+G+GT
Sbjct: 96 VTGMDEDVARLLRK--VTKPVFLVVNKVDNGKRAEDAV-EFYSLGLGDYFTIASINGSGT 152
Query: 345 GELLD 349
G+LLD
Sbjct: 153 GDLLD 157
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 81/185 (43%), Gaps = 35/185 (18%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LPR A+VGRPN GKS+ N L+G +R IV D G TRD + + +F LVDT G+
Sbjct: 175 LPRFAVVGRPNAGKSSFINALIGEDRYIVTDIAGTTRDAIDTKYNRFGFDFNLVDTAGIR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
SK + EDL + + ++ AIE S V + +VD
Sbjct: 235 KKSK----VKEDLEFYSVM-----------------------RSVRAIEHSDVCLLVVDA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSL------GFSPLPI 336
G + I WL + K I++ VNK + K +EF F+ +PI
Sbjct: 268 NRGFDGQVQNIF-WLAERNR-KGIVILVNKWDLVEKDNKTTNEFEKYIRSQIEPFTDVPI 325
Query: 337 SAISG 341
IS
Sbjct: 326 VFISA 330
>gi|374598814|ref|ZP_09671816.1| GTP-binding protein engA [Myroides odoratus DSM 2801]
gi|423322994|ref|ZP_17300836.1| GTPase Der [Myroides odoratimimus CIP 103059]
gi|373910284|gb|EHQ42133.1| GTP-binding protein engA [Myroides odoratus DSM 2801]
gi|404610015|gb|EKB09373.1| GTPase Der [Myroides odoratimimus CIP 103059]
Length = 437
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 105/191 (54%), Gaps = 33/191 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS FNRL+ AIV GVTRDR YG+S W EF ++DTGG +
Sbjct: 5 VAIVGRPNVGKSTFFNRLIQRREAIVDSVSGVTRDRNYGKSEWNGREFSVIDTGGYI--- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
K ++ E+ I RQ AIEE+ VIIF+VD + G
Sbjct: 62 KGSDDVFEE--------------------------EIRRQVALAIEEADVIIFVVDVEEG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGTGT 344
+T D E+A L + K + +AVNK +S ++ + EF++LG + PI+ +SG+GT
Sbjct: 96 ITPMDAEVAKLLHRE--TKPVFVAVNKVDSGKR-MEDTYEFYNLGLGEIYPIAGMSGSGT 152
Query: 345 GELLDLVCSEL 355
G+LLD V L
Sbjct: 153 GDLLDEVIKVL 163
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 74/164 (45%), Gaps = 29/164 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LPR A+VGRPN GKS+ N L+G +R IV D G TRD + R +F LVDT G+
Sbjct: 177 LPRFAVVGRPNAGKSSFINALIGEDRYIVTDIAGTTRDAIDTRFTQFGFDFNLVDTAGI- 235
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + + EDL + + ++ AIE S V I +VD
Sbjct: 236 ---RRKTKVKEDLEFYSVM-----------------------RSIRAIEHSDVCILMVDA 269
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G D+ I KN K I++ VNK + K + +F
Sbjct: 270 TRGFEGQDQNIFWLAEKN--RKGIVILVNKWDLIDKDTLTSKQF 311
>gi|312884308|ref|ZP_07744017.1| GTP-binding protein EngA [Vibrio caribbenthicus ATCC BAA-2122]
gi|309368081|gb|EFP95624.1| GTP-binding protein EngA [Vibrio caribbenthicus ATCC BAA-2122]
Length = 495
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 109/192 (56%), Gaps = 40/192 (20%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YG++ GEHEF+++DTGG+
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRSRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+G T E +M Q+ AAI+E+ V++F+VD
Sbjct: 61 ----------------------DG----TEEGVETKMAE----QSLAAIDEADVVLFMVD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSPL-PIS 337
G+AGLT AD I++ LRK + K +L VNK + GI ++FW LG + I+
Sbjct: 91 GRAGLTPADIAISNHLRK--LAKPSMLVVNKVD----GIDADAASADFWQLGVDDMYQIA 144
Query: 338 AISGTGTGELLD 349
A G G G L+D
Sbjct: 145 AAHGRGVGALID 156
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 100/224 (44%), Gaps = 48/224 (21%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS L NR++G R +V D PG TRD +Y E++L+DT GV
Sbjct: 208 KLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRRR 267
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + E ++ T+ AIE++ V++ ++D +
Sbjct: 268 KRINETV-EKFSVVKTL--------------------------KAIEDANVVLLVIDARE 300
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI-MQVSEFWS------LGFSPLP-- 335
++ D + + + I+LAVNK + G+ M V E LGF
Sbjct: 301 NISDQDLSLLGFALN--AGRSIVLAVNKWD----GLDMDVKEHVKKELDRRLGFVDFARL 354
Query: 336 --ISAISGTGTGELLDLVCSELKKVEVCIGFLLICNAITKIFHI 377
ISA+ GTG G L + V K +G + +T+I +
Sbjct: 355 HFISALHGTGVGHLFESVQEAYKSATTRVG----TSVLTRIMKM 394
>gi|421873079|ref|ZP_16304695.1| ribosome-associated GTPase EngA [Brevibacillus laterosporus GI-9]
gi|372458025|emb|CCF14244.1| ribosome-associated GTPase EngA [Brevibacillus laterosporus GI-9]
Length = 437
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/198 (39%), Positives = 105/198 (53%), Gaps = 33/198 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS +FNRL+G AIV D+PGVTRDR+Y + W EF ++DTGG+
Sbjct: 3 LPVVAIVGRPNVGKSTIFNRLIGERVAIVEDKPGVTRDRLYAKGEWLNREFHVIDTGGIE 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
Q + + + QA AI+E+ VII +VD
Sbjct: 63 FAETDQ-----------------------------ILTQMRYQAELAIDEADVIILIVDV 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
++G+T AD +A L N K I+LAVNK ++ + EF+ LG P PIS G
Sbjct: 94 RSGVTDADLNVARML--NRTGKPIVLAVNKVDNFEMR-NDIYEFYQLGVGEPFPISGSHG 150
Query: 342 TGTGELLDLVCSELKKVE 359
G G++LD V L V+
Sbjct: 151 LGLGDMLDEVFHHLPPVD 168
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 88/178 (49%), Gaps = 37/178 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
RV+I+GRPNVGKS+L N ++G R IV + G TRD + E++LVDT G+
Sbjct: 178 RVSIIGRPNVGKSSLTNAILGEERVIVSEIAGTTRDAIDTPFVRDGQEYVLVDTAGM--- 234
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E T + +V R A AIE+S V++ +++G+
Sbjct: 235 -RKKGKVYE---------------GTEKYSVMR--------ALKAIEDSDVVLVVINGEE 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRK--GIMQ------VSEFWSLGFSPL 334
G+ D++IA + + + +I+ VNK ++ K MQ EF L ++P+
Sbjct: 271 GIIEQDKKIAGYAHE--AGRGVIIVVNKWDALEKDDKTMQRFTELIREEFKYLSYAPI 326
>gi|339010827|ref|ZP_08643396.1| GTPase Der [Brevibacillus laterosporus LMG 15441]
gi|338772161|gb|EGP31695.1| GTPase Der [Brevibacillus laterosporus LMG 15441]
Length = 437
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/198 (39%), Positives = 105/198 (53%), Gaps = 33/198 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS +FNRL+G AIV D+PGVTRDR+Y + W EF ++DTGG+
Sbjct: 3 LPVVAIVGRPNVGKSTIFNRLIGERVAIVEDKPGVTRDRLYAKGEWLNREFHVIDTGGIE 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
Q + + + QA AI+E+ VII +VD
Sbjct: 63 FAETDQ-----------------------------ILTQMRYQAELAIDEADVIILIVDV 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
++G+T AD +A L N K I+LAVNK ++ + EF+ LG P PIS G
Sbjct: 94 RSGVTDADLNVARML--NRTGKPIVLAVNKVDNFEMR-NDIYEFYQLGVGEPFPISGSHG 150
Query: 342 TGTGELLDLVCSELKKVE 359
G G++LD V L V+
Sbjct: 151 LGLGDMLDEVFHHLPPVD 168
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 88/178 (49%), Gaps = 37/178 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
RV+I+GRPNVGKS+L N ++G R IV + G TRD + E++LVDT G+
Sbjct: 178 RVSIIGRPNVGKSSLTNAILGEERVIVSEIAGTTRDAIDTPFVRDGQEYVLVDTAGM--- 234
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E T + +V R A AIE+S V++ +++G+
Sbjct: 235 -RKKGKVYE---------------GTEKYSVMR--------ALKAIEDSDVVLVVINGEE 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRK--GIMQ------VSEFWSLGFSPL 334
G+ D++IA + + + +I+ VNK ++ K MQ EF L ++P+
Sbjct: 271 GIIEQDKKIAGYAHE--AGRGVIIVVNKWDALEKDDKTMQRFTELIREEFKYLAYAPI 326
>gi|317504953|ref|ZP_07962902.1| ribosome-associated GTPase EngA [Prevotella salivae DSM 15606]
gi|315663945|gb|EFV03663.1| ribosome-associated GTPase EngA [Prevotella salivae DSM 15606]
Length = 437
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 104/192 (54%), Gaps = 35/192 (18%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGG-VLNV 224
VAIVGRPNVGKS LFNRL RAIV D G TRDR YG+ W EF +VDTGG V+N
Sbjct: 5 VAIVGRPNVGKSTLFNRLTQSRRAIVSDTAGTTRDRQYGKCSWNSKEFSIVDTGGWVVN- 63
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+I ED I RQ A EE+ +++FLVD
Sbjct: 64 ---SDDIFED--------------------------AIRRQVLVATEEADLVLFLVDVST 94
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTG 343
G+T DE++A LR+ + +IL NK ++ + + +EF+ LG P ISA +G G
Sbjct: 95 GVTDWDEDVAMILRRAKLP--VILVANKVDNNSE-YYEAAEFYKLGLGEPQCISAATGGG 151
Query: 344 TGELLDLVCSEL 355
TG+LLDL+ +L
Sbjct: 152 TGDLLDLIIDKL 163
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 75/155 (48%), Gaps = 29/155 (18%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
E +PR A+VGRPN GKS++ N +G +R IV + G TRD +Y R +F LVDT
Sbjct: 172 EEEIPRFAVVGRPNAGKSSIINAFIGEDRNIVTEIAGTTRDSIYTRYDKFGFDFYLVDTA 231
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G+ + + + EDL + + ++ AIE S V I +
Sbjct: 232 GI----RRKNKVSEDLEFYSVM-----------------------RSIRAIENSDVCILM 264
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
+D G+ A D I ++KN K +++ VNK +
Sbjct: 265 LDATRGVEAQDMNIFQLIQKN--KKSLVVVVNKWD 297
>gi|288924558|ref|ZP_06418495.1| ribosome-associated GTPase EngA [Prevotella buccae D17]
gi|315607420|ref|ZP_07882416.1| ribosome-associated GTPase EngA [Prevotella buccae ATCC 33574]
gi|402306468|ref|ZP_10825513.1| ribosome-associated GTPase EngA [Prevotella sp. MSX73]
gi|288338345|gb|EFC76694.1| ribosome-associated GTPase EngA [Prevotella buccae D17]
gi|315250852|gb|EFU30845.1| ribosome-associated GTPase EngA [Prevotella buccae ATCC 33574]
gi|400379792|gb|EJP32624.1| ribosome-associated GTPase EngA [Prevotella sp. MSX73]
Length = 437
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/195 (41%), Positives = 106/195 (54%), Gaps = 33/195 (16%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRL RAIV D G TRDR YG+ W EF +VDTGG V
Sbjct: 5 VAIVGRPNVGKSTLFNRLTQSRRAIVSDTAGTTRDRQYGKCQWNGREFSVVDTGGW--VV 62
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
KS +I ED I RQ A EE+ +++FLVD G
Sbjct: 63 KSD-DIFED--------------------------AIRRQVLVATEEADLVLFLVDVSTG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+T DE++A LR+ + +IL NK ++ + + +EF+ LG P ISA +G GT
Sbjct: 96 VTDWDEDVAMILRRTKLP--VILVANKVDNSSE-YYEAAEFYKLGLGDPHCISAATGGGT 152
Query: 345 GELLDLVCSELKKVE 359
G+LLDL+ +++ E
Sbjct: 153 GDLLDLILEKMQPKE 167
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 29/152 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
+PR A+VGRPNVGKS++ N +G +R IV + G TRD +Y R +F LVDT G+
Sbjct: 175 IPRFAVVGRPNVGKSSIINAFIGEDRNIVTEIAGTTRDSIYTRYDKFGFDFYLVDTAGI- 233
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + + EDL + + ++ AIE S V I ++D
Sbjct: 234 ---RRKNKVSEDLEFYSVM-----------------------RSIRAIENSDVCILMIDA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
G+ D I ++KN +K +++ VNK +
Sbjct: 268 TRGIETQDMNIFQLIQKN--NKSLVVVVNKWD 297
>gi|346314466|ref|ZP_08855986.1| GTP-binding protein engA [Erysipelotrichaceae bacterium 2_2_44A]
gi|345906358|gb|EGX76085.1| GTP-binding protein engA [Erysipelotrichaceae bacterium 2_2_44A]
Length = 436
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 106/195 (54%), Gaps = 34/195 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS +FNR++G ++IV D PGVTRDR+YG++ W EF ++DTG
Sbjct: 6 VAIVGRPNVGKSTIFNRIIGERKSIVEDTPGVTRDRIYGKAEWLTREFRVIDTG------ 59
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
GI LA ++ + I Q AI+E+ I+F+V G+ G
Sbjct: 60 -------------------GIQLANQD-----FQTEINMQVEIAIDEADCIVFVVSGKDG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
LT DE +A L K K +ILAVNK + + + EF+SLG PL +S G G
Sbjct: 96 LTHDDEYVARLLHKT--KKPVILAVNKVDDFAQN-DAIYEFYSLGLGDPLAVSGAHGIGI 152
Query: 345 GELLDLVCSELKKVE 359
G++LD V L + E
Sbjct: 153 GDVLDAVIHALPEKE 167
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 82/180 (45%), Gaps = 37/180 (20%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
+ + ++GRPNVGKS+L N ++ R IV + G TRD + E++++DT G+
Sbjct: 174 MTKFCVIGRPNVGKSSLVNSILNQERVIVSNIEGTTRDAIDTPFKREGKEYVVIDTAGIR 233
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K NI + +V R A +AIE S V++ ++DG
Sbjct: 234 KRGKVYENI-------------------EKYSVLR--------AMSAIERSDVVLVVIDG 266
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSPL 334
+ G+ D+ +A + + K +++ NK ++ K + ++F L ++P+
Sbjct: 267 EKGIRDQDKHVAGYAHE--AGKGVVIVYNKWDAVEKDEQTMHTIEKEIRAQFLYLSYAPI 324
>gi|366166680|ref|ZP_09466435.1| GTP-binding protein Der [Acetivibrio cellulolyticus CD2]
Length = 440
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/187 (41%), Positives = 104/187 (55%), Gaps = 32/187 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS FN L G +IV D PGVTRDR+Y W +F L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTFFNYLAGRRISIVEDTPGVTRDRIYTEVEWRNRKFTLIDTGGIEP 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
S+ + IM+ + + QA AIE + VI+F+VD +
Sbjct: 64 YSEDK--IMQQM---------------------------KSQAEIAIETANVIVFMVDRK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGT 342
GLTA+D E+A LRK+ K +IL VNK + + +V EF++LG L +S+I G
Sbjct: 95 DGLTASDNEVATLLRKS--KKPVILVVNKVDRVGELPAEVYEFYNLGIGDLMTVSSIHGL 152
Query: 343 GTGELLD 349
G G+LLD
Sbjct: 153 GMGDLLD 159
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 95/195 (48%), Gaps = 38/195 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VA++G+PN GKS+L N+++G +R IV D PG TRD + E +F+ +DT G+
Sbjct: 179 KVAVIGKPNAGKSSLINKVLGEDRVIVSDIPGTTRDAIDTYVENEEGKFVFIDTAGI--- 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ Q I E++ +TI ++ AIE + V + ++D +
Sbjct: 236 -RRQSKINENIERYSTI-----------------------RSWTAIERADVCLIMIDAEE 271
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFW-----SLGF---SP-LP 335
G+T D +IA + + K I+ VNK + K + E+ LGF +P +
Sbjct: 272 GVTEQDTKIAGYAHEQ--GKASIVVVNKWDLVEKNTGTLEEYRKTVLEKLGFMLYAPVMF 329
Query: 336 ISAISGTGTGELLDL 350
ISA SG ++ +L
Sbjct: 330 ISAKSGQRVNKVFEL 344
>gi|326204998|ref|ZP_08194849.1| ribosome-associated GTPase EngA [Clostridium papyrosolvens DSM
2782]
gi|325984864|gb|EGD45709.1| ribosome-associated GTPase EngA [Clostridium papyrosolvens DSM
2782]
Length = 441
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 105/189 (55%), Gaps = 32/189 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS FN L G +IV D PGVTRDR+Y W +F L+DTGG+
Sbjct: 4 PVVAVVGRPNVGKSTFFNYLAGSRISIVEDTPGVTRDRIYTEIEWRSTKFTLIDTGGIEP 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
S ED+ + ++RQA AIE + VI+F+VDG+
Sbjct: 64 YS-------EDIIM----------------------QQMKRQAEIAIETADVIVFMVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLP-ISAISGT 342
G+TA D+E+A LRK+ K ++L VNK + + V EF++LG + IS++ G
Sbjct: 95 DGMTATDKEVATMLRKS--QKPVVLCVNKVDRIGEPPPDVYEFYNLGMGDMQIISSVHGL 152
Query: 343 GTGELLDLV 351
G G+LLD +
Sbjct: 153 GMGDLLDAI 161
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 90/196 (45%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VA+VG+PN GKS+L N ++G NR IV + PG TRD + ++ +DT G+
Sbjct: 179 KVAVVGKPNAGKSSLINSILGENRVIVSNIPGTTRDAIDTHVEMDGQKYTFIDTAGIRKR 238
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK I E + +TI ++ AIE + V + ++D +
Sbjct: 239 SK----INETIEKYSTI-----------------------RSWTAIERADVCLIMIDAED 271
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFW-----SLGFSP----LP 335
G+T D +IA + + K I+ VNK + K + E+ LGF L
Sbjct: 272 GVTEQDTKIAGYAHQQ--GKASIIVVNKWDLIEKQTGTLEEYRKVVHEKLGFMTYAPVLF 329
Query: 336 ISAISGTGTGELLDLV 351
ISA +G ++ +L+
Sbjct: 330 ISAKTGQRVNKIYELI 345
>gi|313897444|ref|ZP_07830987.1| ribosome biogenesis GTPase Der [Clostridium sp. HGF2]
gi|422327261|ref|ZP_16408288.1| ribosome-associated GTPase EngA [Erysipelotrichaceae bacterium
6_1_45]
gi|312957814|gb|EFR39439.1| ribosome biogenesis GTPase Der [Clostridium sp. HGF2]
gi|371663955|gb|EHO29139.1| ribosome-associated GTPase EngA [Erysipelotrichaceae bacterium
6_1_45]
Length = 436
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 106/195 (54%), Gaps = 34/195 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS +FNR++G ++IV D PGVTRDR+YG++ W EF ++DTG
Sbjct: 6 VAIVGRPNVGKSTIFNRIIGERKSIVEDTPGVTRDRIYGKAEWLTREFRVIDTG------ 59
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
GI LA ++ + I Q AI+E+ I+F+V G+ G
Sbjct: 60 -------------------GIQLANQD-----FQTEINMQVEIAIDEADCIVFVVSGKDG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
LT DE +A L K K +ILAVNK + + + EF+SLG PL +S G G
Sbjct: 96 LTHDDEYVARLLHKT--KKPVILAVNKVDDFAQN-DAIYEFYSLGLGDPLAVSGAHGIGI 152
Query: 345 GELLDLVCSELKKVE 359
G++LD V L + E
Sbjct: 153 GDVLDAVIHALPEKE 167
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 86/187 (45%), Gaps = 38/187 (20%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
+ + ++GRPNVGKS+L N ++ R IV + G TRD + E++++DT G+
Sbjct: 174 MTKFCVIGRPNVGKSSLVNAILNQERVIVSNIEGTTRDAIDTPFKREGKEYVVIDTAGIR 233
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K NI + +V R A +AIE S V++ ++DG
Sbjct: 234 KRGKVYENI-------------------EKYSVLR--------AMSAIERSDVVLVVIDG 266
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSP- 333
+ G+ D+ +A + + K +++ NK ++ K + ++F L ++P
Sbjct: 267 EKGIRDQDKHVAGYAHE--AGKGVVIVYNKWDAVEKDEQTMHTIEKEIRAQFLYLSYAPV 324
Query: 334 LPISAIS 340
L +SA+
Sbjct: 325 LFVSALK 331
>gi|373121249|ref|ZP_09535117.1| ribosome-associated GTPase EngA [Erysipelotrichaceae bacterium
21_3]
gi|371665267|gb|EHO30432.1| ribosome-associated GTPase EngA [Erysipelotrichaceae bacterium
21_3]
Length = 436
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 106/195 (54%), Gaps = 34/195 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS +FNR++G ++IV D PGVTRDR+YG++ W EF ++DTG
Sbjct: 6 VAIVGRPNVGKSTIFNRIIGERKSIVEDTPGVTRDRIYGKAEWLTREFRVIDTG------ 59
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
GI LA ++ + I Q AI+E+ I+F+V G+ G
Sbjct: 60 -------------------GIQLANQD-----FQTEINMQVEIAIDEADCIVFVVSGKDG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
LT DE +A L K K +ILAVNK + + + EF+SLG PL +S G G
Sbjct: 96 LTHDDEYVARLLHKT--KKPVILAVNKVDDFAQN-DAIYEFYSLGLGDPLAVSGAHGIGI 152
Query: 345 GELLDLVCSELKKVE 359
G++LD V L + E
Sbjct: 153 GDVLDAVIHALPEKE 167
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 82/180 (45%), Gaps = 37/180 (20%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
+ + ++GRPNVGKS+L N ++ R IV + G TRD + E++++DT G+
Sbjct: 174 MTKFCVIGRPNVGKSSLVNAILNQERVIVSNIEGTTRDAIDTPFKREGKEYVVIDTAGIR 233
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K NI + +V R A +AIE S V++ ++DG
Sbjct: 234 KRGKVYENI-------------------EKYSVLR--------AMSAIERSDVVLVVIDG 266
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSPL 334
+ G+ D+ +A + + K +I+ NK ++ K + ++F L ++P+
Sbjct: 267 EKGIRDQDKHVAGYAHE--AGKGVIIVYNKWDAVEKDEQTMHTIEKEIRAQFLYLSYAPI 324
>gi|209694322|ref|YP_002262250.1| GTP-binding protein EngA [Aliivibrio salmonicida LFI1238]
gi|238058970|sp|B6EGZ1.1|DER_ALISL RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|208008273|emb|CAQ78418.1| GTP-binding protein [Aliivibrio salmonicida LFI1238]
Length = 500
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/196 (40%), Positives = 106/196 (54%), Gaps = 40/196 (20%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P VA+VGRPNVGKS LFNR+ A+V D PG+TRDR YGR+ E EF+L+DTGG+
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRVTRTRDALVADFPGLTRDRKYGRAKLEEQEFILIDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
T E +M Q+ AAIEE+ V++F+VD
Sbjct: 61 --------------------------DGTEEGVETKMAE----QSLAAIEEADVVLFMVD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSPL-PIS 337
G+AGLT++DE IA LR +K L VNK + GI +EFW LG S + I+
Sbjct: 91 GRAGLTSSDEAIAKHLRSR--EKPTFLVVNKID----GIDADAASAEFWQLGMSKVYQIA 144
Query: 338 AISGTGTGELLDLVCS 353
A G G LL+L +
Sbjct: 145 ASHGRGVTSLLELALA 160
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 90/194 (46%), Gaps = 36/194 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS L NR++G R +V D PG TRD +Y E++L+DT GV
Sbjct: 212 KLAIIGRPNVGKSTLINRILGEERVVVYDMPGTTRDSIYIPMEREGQEYVLIDTAGVRRR 271
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + E ++ T+ AIE++ V++ ++D +
Sbjct: 272 GRINETV-EKFSVIKTL--------------------------KAIEDANVVLLVIDARE 304
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQ--VSEF-WSLGFSPLP----IS 337
++ D + + + +++AVNK + + + SE LGF IS
Sbjct: 305 NISDQDLSLLGFALN--AGRSLVIAVNKWDGLNNEVKEKVKSELDRRLGFVDFARLHFIS 362
Query: 338 AISGTGTGELLDLV 351
A+ GTG G L + V
Sbjct: 363 ALHGTGVGHLYESV 376
>gi|281425284|ref|ZP_06256197.1| hypothetical protein HMPREF0971_02256 [Prevotella oris F0302]
gi|299141484|ref|ZP_07034620.1| ribosome-associated GTPase EngA [Prevotella oris C735]
gi|281400577|gb|EFB31408.1| ribosome-associated GTPase EngA [Prevotella oris F0302]
gi|298576820|gb|EFI48690.1| ribosome-associated GTPase EngA [Prevotella oris C735]
Length = 437
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/191 (41%), Positives = 104/191 (54%), Gaps = 33/191 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRL RAIV D G TRDR YG+ W EF +VDTGG V
Sbjct: 5 VAIVGRPNVGKSTLFNRLTQSRRAIVSDTAGTTRDRQYGKCSWNAKEFSVVDTGGW--VV 62
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
KS +I ED I RQ A EE+ +++FLVD G
Sbjct: 63 KSD-DIFED--------------------------AIRRQVLVATEEADLVLFLVDVTTG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+T DE++A LR+ + +IL NK ++ + + +EF+ LG P ISA +G GT
Sbjct: 96 VTDWDEDVATILRRAKLP--VILVANKVDNSSE-YYEAAEFYKLGIGEPQCISAATGGGT 152
Query: 345 GELLDLVCSEL 355
G+LLD++ +L
Sbjct: 153 GDLLDMIVDKL 163
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 76/155 (49%), Gaps = 29/155 (18%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
E +PR A+VGRPN GKS++ N +G +R IV + G TRD +Y R +F LVDT
Sbjct: 172 EDEIPRFAVVGRPNAGKSSIINAFIGEDRNIVTEIAGTTRDSIYTRFDKFGFDFYLVDTA 231
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G+ + + + EDL + + ++ AIE S V I +
Sbjct: 232 GI----RRKNKVSEDLEFYSVM-----------------------RSIRAIENSDVCILM 264
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
+D G+ A D I ++KN +K +++ VNK +
Sbjct: 265 LDATRGVEAQDMNIFQLIQKN--NKSLVVVVNKWD 297
>gi|449878037|ref|ZP_21783457.1| GTP-binding protein EngA [Streptococcus mutans S1B]
gi|449940830|ref|ZP_21805239.1| GTP-binding protein EngA [Streptococcus mutans 11A1]
gi|449152930|gb|EMB56625.1| GTP-binding protein EngA [Streptococcus mutans 11A1]
gi|449250029|gb|EMC48112.1| GTP-binding protein EngA [Streptococcus mutans S1B]
Length = 436
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 107/196 (54%), Gaps = 38/196 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKSALFNR+ G +IV D GVTRDR+Y ++ W +F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSALFNRIAGERISIVEDVEGVTRDRIYTKAEWLNRQFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAI 339
+ +T ADE +A L + + K +ILAVNK ++P R I +F++LG P P+S+
Sbjct: 93 KESITDADEYVAKILYRTH--KPVILAVNKVDNPEMRSAIY---DFYALGLGDPYPVSSA 147
Query: 340 SGTGTGELLDLVCSEL 355
G GTG++LD + L
Sbjct: 148 HGIGTGDVLDAIVDNL 163
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 94/198 (47%), Gaps = 41/198 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
+ +++GRPNVGKS+L N ++G +R I G TRD + +F E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAI-DTTFTDEEGQEFTMIDTAGMR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A AI+ S +++ +++
Sbjct: 235 KSGKVYEN-------------------TEKYSVMR--------AMRAIDRSDIVLMVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPL 334
+ G+ D+ IA + + K I++ VNK ++ +K ++ +F + ++P+
Sbjct: 268 EEGIREYDKRIAGFAHE--AGKGIVVVVNKWDTIKKDNHTMAQWETDIREQFQYIPYAPI 325
Query: 335 P-ISAISGTGTGELLDLV 351
+SA++ +L D++
Sbjct: 326 VFVSAVTKQRLHKLPDVI 343
>gi|322434484|ref|YP_004216696.1| ribosome-associated GTPase EngA [Granulicella tundricola MP5ACTX9]
gi|321162211|gb|ADW67916.1| ribosome-associated GTPase EngA [Granulicella tundricola MP5ACTX9]
Length = 622
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/195 (42%), Positives = 109/195 (55%), Gaps = 35/195 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +A+ GRPNVGKS LFNRL G R+IV DEPG+TRDR+YG W + LVDTGGV
Sbjct: 139 LPLIAVCGRPNVGKSTLFNRLTGSRRSIVGDEPGITRDRIYGEIEWQNVKARLVDTGGV- 197
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D A+ +PS I RQA A++E+ I+ +VDG
Sbjct: 198 --------VPDDEAL--------------------IPSEIFRQAQVALQEADAIVMVVDG 229
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSE-FWSLGF-SPLPISAIS 340
+ L + D E+A L K F LAVNK +S + + +E F LGF + LPISA
Sbjct: 230 RTELASPDMELARLLMKGGKPTF--LAVNKMDS--ESMYAAAENFRRLGFKNVLPISAEH 285
Query: 341 GTGTGELLDLVCSEL 355
G+G G+LLD V + L
Sbjct: 286 GSGIGDLLDEVFAVL 300
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 67/150 (44%), Gaps = 29/150 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VAI+GRPNVGKS L N L +RAIV G TRD + H F VDT G+
Sbjct: 348 KVAIIGRPNVGKSTLLNALTETDRAIVSPIAGTTRDAVDEIVEKKGHIFRFVDTAGIRKK 407
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K++ + E L++ A +E + V + ++D Q
Sbjct: 408 GKTK-MMAEKLSVI--------------------------MARKHLEAADVSLLVIDAQE 440
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCE 314
G+T D I + ++ + +I+ +NK +
Sbjct: 441 GVTNIDANIGGYAHES--GRSVIIVINKWD 468
>gi|373954476|ref|ZP_09614436.1| GTP-binding protein engA [Mucilaginibacter paludis DSM 18603]
gi|373891076|gb|EHQ26973.1| GTP-binding protein engA [Mucilaginibacter paludis DSM 18603]
Length = 433
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 106/194 (54%), Gaps = 33/194 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRL+ +AIV D GVTRDR YG S W H+F ++DTGG + S
Sbjct: 5 VAIVGRPNVGKSTLFNRLIEARKAIVDDFSGVTRDRHYGVSEWTGHDFTVIDTGGYVANS 64
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
EAA I Q AIEE+ VI+F+VD G
Sbjct: 65 DD----------------------VFEAA-------IREQVIIAIEEASVILFMVDVTTG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGTGT 344
+T D+EIA +LRK+ F++ NK ++ + + + + F+ G + ISA++G+GT
Sbjct: 96 ITDLDDEIATFLRKSKKPVFVV--SNKVDNNSQQV-ESATFYGFGLGDIYNISAMTGSGT 152
Query: 345 GELLDLVCSELKKV 358
GELLD V + V
Sbjct: 153 GELLDEVVKTFEDV 166
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 80/163 (49%), Gaps = 31/163 (19%)
Query: 154 TIGNVP--EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEH 211
T +VP ++ LP+ I GRPNVGKS++ N L+G +R IV G TRD ++ H
Sbjct: 162 TFEDVPLEQNTLPKYTIAGRPNVGKSSIINTLLGHDRNIVTPIAGTTRDSIHIHYNQFGH 221
Query: 212 EFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIE 271
+FML+DT G+ +K + NI E ++ TI AIE
Sbjct: 222 DFMLIDTAGMRKKTKVKENI-EFYSVMRTI--------------------------KAIE 254
Query: 272 ESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
ES V+I ++D G+ A D I KN K I++ VNK +
Sbjct: 255 ESDVVILMIDAVEGIEAQDVNIFHLAEKN--KKGIVIVVNKWD 295
>gi|449947645|ref|ZP_21807534.1| GTP-binding protein EngA [Streptococcus mutans 11SSST2]
gi|449168375|gb|EMB71196.1| GTP-binding protein EngA [Streptococcus mutans 11SSST2]
Length = 436
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 107/196 (54%), Gaps = 38/196 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKSALFNR+ G +IV D GVTRDR+Y ++ W +F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSALFNRIAGERISIVEDVEGVTRDRIYTKAEWLNRQFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAI 339
+ +T ADE +A L + + K +ILAVNK ++P R I +F++LG P P+S+
Sbjct: 93 KESITDADEYVAKILYRTH--KPVILAVNKVDNPEMRSAIY---DFYALGLGDPYPVSSA 147
Query: 340 SGTGTGELLDLVCSEL 355
G GTG++LD + L
Sbjct: 148 HGIGTGDVLDAIVDNL 163
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 94/198 (47%), Gaps = 41/198 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
+ +++GRPNVGKS+L N ++G +R I G TRD + +F E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAI-DTTFTDEEGQEFTMIDTAGMR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A AI+ S +++ +++
Sbjct: 235 KSGKVYEN-------------------TEKYSVMR--------AMRAIDRSDIVLMVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSE--------FWSLGFSPL 334
+ G+ D+ IA + + K I++ VNK ++ +K V++ F + ++P+
Sbjct: 268 EEGIREYDKRIAGFAHE--AGKGIVVVVNKWDAIKKDNRTVAQWETDIRDNFQYIPYAPI 325
Query: 335 P-ISAISGTGTGELLDLV 351
+SA++ +L D++
Sbjct: 326 VFVSAVTKQRLHKLPDVI 343
>gi|450063589|ref|ZP_21844997.1| GTP-binding protein EngA [Streptococcus mutans NLML5]
gi|449204554|gb|EMC05344.1| GTP-binding protein EngA [Streptococcus mutans NLML5]
Length = 436
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 107/196 (54%), Gaps = 38/196 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKSALFNR+ G +IV D GVTRDR+Y ++ W +F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSALFNRIAGERISIVEDVEGVTRDRIYTKAEWLNRQFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAI 339
+ +T ADE +A L + + K +ILAVNK ++P R I +F++LG P P+S+
Sbjct: 93 KESITDADEYVAKILYRTH--KPVILAVNKVDNPEMRSAIY---DFYALGLGDPYPVSSA 147
Query: 340 SGTGTGELLDLVCSEL 355
G GTG++LD + L
Sbjct: 148 HGIGTGDVLDAIVDNL 163
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 94/198 (47%), Gaps = 41/198 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
+ +++GRPNVGKS+L N ++G +R I G TRD + +F E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAI-DTTFTDEEGQEFTMIDTAGMR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A AI+ S +++ +++
Sbjct: 235 KSGKVYEN-------------------TEKYSVMR--------AMRAIDRSDIVLMVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSE--------FWSLGFSPL 334
+ G+ D+ IA + + K I++ VNK ++ +K V++ F + ++P+
Sbjct: 268 EEGIREYDKRIAGFAHE--AGKGIVVVVNKWDAIKKDNRTVAQWEADIRDNFQYIPYAPI 325
Query: 335 P-ISAISGTGTGELLDLV 351
+SA++ +L D++
Sbjct: 326 VFVSAVTKQRLHKLPDVI 343
>gi|449964022|ref|ZP_21811107.1| GTP-binding protein EngA [Streptococcus mutans 15VF2]
gi|449172848|gb|EMB75456.1| GTP-binding protein EngA [Streptococcus mutans 15VF2]
Length = 436
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 107/196 (54%), Gaps = 38/196 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKSALFNR+ G +IV D GVTRDR+Y ++ W +F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSALFNRIAGERISIVEDVEGVTRDRIYTKAEWLNRQFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAI 339
+ +T ADE +A L + + K +ILAVNK ++P R I +F++LG P P+S+
Sbjct: 93 KESITDADEYVAKILYRTH--KPVILAVNKVDNPEMRSAIY---DFYALGLGDPYPVSSA 147
Query: 340 SGTGTGELLDLVCSEL 355
G GTG++LD + L
Sbjct: 148 HGIGTGDVLDAIVDNL 163
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 94/198 (47%), Gaps = 41/198 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
+ +++GRPNVGKS+L N ++G +R I G TRD + +F E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAI-DTTFTDEEGQEFTMIDTAGMR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A AI+ S +++ +++
Sbjct: 235 KSGKVYEN-------------------TEKYSVMR--------AMRAIDRSDIVLMVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSE--------FWSLGFSPL 334
+ G+ D+ IA + + K I++ VNK ++ +K V++ F + ++P+
Sbjct: 268 EEGIREYDKRIAGFAHE--AGKGIVVVVNKWDAIKKDNRTVAQWEADIRDNFQYIPYAPI 325
Query: 335 P-ISAISGTGTGELLDLV 351
+SA++ +L D++
Sbjct: 326 VFVSAVTKQRLHKLPDVI 343
>gi|282855425|ref|ZP_06264746.1| ribosome-associated GTPase EngA [Pyramidobacter piscolens W5455]
gi|282586721|gb|EFB91968.1| ribosome-associated GTPase EngA [Pyramidobacter piscolens W5455]
Length = 443
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 107/191 (56%), Gaps = 33/191 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
V+IVGRPNVGKS+LFNR++G RAIV D PGVTRDR+YG W + F +VDTGG+L
Sbjct: 4 VSIVGRPNVGKSSLFNRIIGERRAIVDDMPGVTRDRLYGCVQWKDKSFYVVDTGGLL--L 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
K + IME GM+ Q AIEES V+IF+VDG G
Sbjct: 62 KDKDPIME--------GMKD-------------------QIFQAIEESDVVIFMVDGSRG 94
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP-LPISAISGTGT 344
+T DE++A LR + +ILAVNK + V+E +SLGF + +SA+ G
Sbjct: 95 VTWMDEDVAQVLRSH--SSMVILAVNKIDDFSHE-DDVAEAYSLGFEKVVGVSALHDRGI 151
Query: 345 GELLDLVCSEL 355
ELLD V L
Sbjct: 152 DELLDQVVQML 162
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 96/204 (47%), Gaps = 42/204 (20%)
Query: 159 PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDT 218
PE + VA+VGRPNVGKS++ N L G R++V D PG TRD + + F +VDT
Sbjct: 171 PEEGVISVALVGRPNVGKSSILNALTGSQRSLVSDIPGTTRDSIDAVLEYKGERFRIVDT 230
Query: 219 GGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIF 278
G+ + + + +D+ +T+ + A+++ V IF
Sbjct: 231 AGL----RRKSRVKDDIEFYSTV-----------------------RTMDAVDQCDVAIF 263
Query: 279 LVDGQAGLTAADEE-IADWLRKNYMDKFIILAVNKCE----SPRKGIMQVS-----EFWS 328
++D + T D+ + + L + K ++L VNK + +P G +V+ EF
Sbjct: 264 VMDVRELATEQDQRLVGEILARG---KGVVLVVNKWDLLPNTPETG-DEVNGKLREEFRF 319
Query: 329 LGFSP-LPISAISGTGTGELLDLV 351
+P L SA+SG LLDLV
Sbjct: 320 ASHAPVLFTSAVSGRRLHRLLDLV 343
>gi|298373119|ref|ZP_06983109.1| ribosome-associated GTPase EngA [Bacteroidetes oral taxon 274 str.
F0058]
gi|298276023|gb|EFI17574.1| ribosome-associated GTPase EngA [Bacteroidetes oral taxon 274 str.
F0058]
Length = 438
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/195 (41%), Positives = 106/195 (54%), Gaps = 33/195 (16%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRL RAIV DE G TRDR YG+ W EF ++DTGG +
Sbjct: 5 VAIVGRPNVGKSTLFNRLTKSRRAIVNDEAGTTRDRHYGKVEWNGKEFSVIDTGGWV--- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+G E I I RQ + AIEE+ VI+F+VD +G
Sbjct: 62 ---------------VGSEDI-----------FEEEINRQVSIAIEEADVILFVVDVLSG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+T D +A LRK+ K +I+ NK ++ Q +EF+SLG P +S+++G G+
Sbjct: 96 VTDLDMFVAQVLRKS--GKNVIVVANKVDTFDLQ-YQATEFYSLGLGDPFILSSVNGLGS 152
Query: 345 GELLDLVCSELKKVE 359
G+LLD V + K E
Sbjct: 153 GDLLDEVLNRFPKNE 167
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 76/152 (50%), Gaps = 29/152 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP++A+VGRPN GKS+L N + NR IV + G TRD +Y R ++F LVDT G+
Sbjct: 176 LPKLAVVGRPNAGKSSLVNAFLDDNRNIVTEIAGTTRDSIYTRYNKFGYDFYLVDTAGI- 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + + ED+ + I +A AIE S V + ++D
Sbjct: 235 ---RKKAKVNEDVEYYSVI-----------------------RAIRAIENSDVCVLMIDA 268
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
+ G+ + D I ++KN K +++ VNK +
Sbjct: 269 ERGIESQDLNIFSLIQKN--KKGLVVCVNKWD 298
>gi|163813998|ref|ZP_02205391.1| hypothetical protein COPEUT_00150 [Coprococcus eutactus ATCC 27759]
gi|158450692|gb|EDP27687.1| ribosome biogenesis GTPase Der [Coprococcus eutactus ATCC 27759]
Length = 445
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 104/193 (53%), Gaps = 32/193 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN L G +IV D PGVTRDR+Y W ++ F L+DTGG+
Sbjct: 9 PIVAIVGRPNVGKSTLFNVLAGEKISIVQDTPGVTRDRIYADINWLDYNFTLIDTGGI-- 66
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
NI+ + SM E QA AIE + VIIF+ D +
Sbjct: 67 -EPETDNII-------------------------LKSMRE-QAEIAIETADVIIFMTDVR 99
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+ D ++AD LR++ K I+L VNK +S K + V EF++LG P PIS S
Sbjct: 100 QGMVDDDSKVADMLRRS--KKPIVLVVNKVDSFEKFMPDVYEFYNLGLGDPHPISGSSRL 157
Query: 343 GTGELLDLVCSEL 355
G G++LD V S
Sbjct: 158 GIGDMLDEVVSHF 170
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 38/197 (19%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
PR+AI+G+PNVGKS++ N+L+G +R IV D G TRD + E++ +DT G+
Sbjct: 183 PRIAIIGKPNVGKSSIINKLLGEDRVIVSDIAGTTRDAIDTEVVRNGREYVFIDTAGLRK 242
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
SK + +I E +I T+ +A+E V + ++D
Sbjct: 243 KSKIKEDI-ERYSIIRTV--------------------------SAVERCNVAVLVIDAT 275
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFW-----SLGFSP----L 334
G+T D +IA + K +I+AVNK ++ K + +F L + P L
Sbjct: 276 EGITDQDAKIAGIAHER--GKGMIIAVNKWDAIEKNDKTIYKFTEEIRNKLSYMPYAELL 333
Query: 335 PISAISGTGTGELLDLV 351
ISA +G +L + +
Sbjct: 334 FISAETGQRLPKLFETI 350
>gi|119025833|ref|YP_909678.1| bifunctional cytidylate kinase/GTP-binding protein [Bifidobacterium
adolescentis ATCC 15703]
gi|118765417|dbj|BAF39596.1| GTP-binding protein engA [Bifidobacterium adolescentis ATCC 15703]
Length = 675
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/273 (36%), Positives = 129/273 (47%), Gaps = 45/273 (16%)
Query: 99 DESDGQDFGIDVDALEREAKDAV-----REYSSLLSRQLIIQDETDDRKDSGKKQKKRKT 153
D SD +FG +D L R DA+ R+Y S L + DE D+ G ++
Sbjct: 175 DNSD-LNFGETLDVLVRIVDDAIEEQEYRQYVSNLEGYEL--DEGDEELIDGTAFSGGES 231
Query: 154 TIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEF 213
G P +L A+VGRPNVGKS L NR++G A+V D PGVTRDR+ + W +F
Sbjct: 232 KNGPKPVGVL---AVVGRPNVGKSTLVNRILGRRAAVVEDTPGVTRDRVSYDAEWCGTDF 288
Query: 214 MLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEES 273
LVDTGG E V + S I QA A++ +
Sbjct: 289 KLVDTGGW------------------------------ETDVEGIESAIASQAQIAVQLA 318
Query: 274 CVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS- 332
+I +VDG GLT DE I LR K + LAVNK + R+ +EFW +G
Sbjct: 319 DAVILVVDGLVGLTDTDERIVKMLRA--AGKPVTLAVNKVDD-RESEYLTAEFWKMGLGE 375
Query: 333 PLPISAISGTGTGELLDLVCSELKKVEVCIGFL 365
P ISA+ G G GELLD LKK E GFL
Sbjct: 376 PYGISAMHGRGIGELLDAALDSLKKAERTSGFL 408
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 42/73 (57%)
Query: 149 KKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFW 208
KK + T G + L RVA+VGRPNVGKS+L N+L R +V D G TRD +
Sbjct: 399 KKAERTSGFLTPSHLRRVALVGRPNVGKSSLLNQLAHEERTVVNDLAGTTRDPVDEVVTV 458
Query: 209 GEHEFMLVDTGGV 221
+++ +DT G+
Sbjct: 459 DGEDWLFIDTAGI 471
>gi|449908997|ref|ZP_21794091.1| GTP-binding protein EngA [Streptococcus mutans OMZ175]
gi|449261902|gb|EMC59362.1| GTP-binding protein EngA [Streptococcus mutans OMZ175]
Length = 436
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 107/196 (54%), Gaps = 38/196 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKSALFNR+ G +IV D GVTRDR+Y ++ W +F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSALFNRIAGERISIVEDVEGVTRDRIYTKAEWLNRQFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+F+V
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVFVVSA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAI 339
+ +T ADE +A L + + K +ILAVNK ++P R I +F++LG P P+S+
Sbjct: 93 KESITDADEYVAKILYRTH--KPVILAVNKVDNPEMRSAIY---DFYALGLGDPYPVSSA 147
Query: 340 SGTGTGELLDLVCSEL 355
G GTG++LD + L
Sbjct: 148 HGIGTGDVLDAIVDNL 163
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 93/198 (46%), Gaps = 41/198 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
+ +++GRPNVGKS+L N ++G +R I G TRD + +F E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAI-DTTFTDEEGQEFTMIDTAGMR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A AI+ S + + +++
Sbjct: 235 KSGKVYEN-------------------TEKYSVMR--------AMRAIDRSDIALMVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPL 334
+ G+ D+ IA + + K I++ VNK ++ +K ++ +F + ++P+
Sbjct: 268 EEGIREYDKRIAGFAHE--AGKGIVVVVNKWDTIKKDNHTMAQWETDIREQFQYIPYAPI 325
Query: 335 P-ISAISGTGTGELLDLV 351
+SA++ +L D++
Sbjct: 326 VFVSALTKQRLHKLPDMI 343
>gi|260776629|ref|ZP_05885524.1| GTP-binding protein EngA [Vibrio coralliilyticus ATCC BAA-450]
gi|260607852|gb|EEX34117.1| GTP-binding protein EngA [Vibrio coralliilyticus ATCC BAA-450]
Length = 495
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 108/192 (56%), Gaps = 40/192 (20%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YG++ GEHEF+++DTGG+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
T E +M Q+ AAI+E+ V++F+VD
Sbjct: 61 --------------------------DGTEEGVETKMAE----QSLAAIDEADVVLFMVD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSPL-PIS 337
G+AGLT +D I++ LRK ++K +L VNK + GI ++FW LG + I+
Sbjct: 91 GRAGLTPSDIAISNHLRK--IEKPSMLVVNKVD----GIDADAASADFWQLGVESMYQIA 144
Query: 338 AISGTGTGELLD 349
A G G G L+D
Sbjct: 145 AAHGRGVGALID 156
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 100/224 (44%), Gaps = 48/224 (21%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS L NR++G R +V D PG TRD +Y E++L+DT GV
Sbjct: 208 KLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRRR 267
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + E ++ T+ A+E++ V++ ++D +
Sbjct: 268 KRINETV-EKFSVVKTL--------------------------KAVEDANVVLLVIDARE 300
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI-MQVSEFWS------LGFSPLP-- 335
++ D + + + I++AVNK + G+ M V E LGF
Sbjct: 301 NISDQDLSLLGFALN--AGRSIVIAVNKWD----GLDMDVKEHVKKELDRRLGFVDFARI 354
Query: 336 --ISAISGTGTGELLDLVCSELKKVEVCIGFLLICNAITKIFHI 377
ISA+ GTG G L + V K +G + +T+I +
Sbjct: 355 HFISALHGTGVGHLFESVQEAYKSATTRVG----TSVLTRIMKM 394
>gi|225871164|ref|YP_002747111.1| GTP-binding protein EngA [Streptococcus equi subsp. equi 4047]
gi|225700568|emb|CAW95070.1| GTP-binding protein EngA [Streptococcus equi subsp. equi 4047]
Length = 446
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/195 (37%), Positives = 106/195 (54%), Gaps = 34/195 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 12 VLPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTTGEWLNRQFSLIDTGGI 71
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+V A I+ QA A++E+ VI+F+V
Sbjct: 72 DDVD------------------------------APFMEQIKHQAHIAMDEADVIVFVVS 101
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE ++ L + +K +IL VNK ++P + +F+SLG P+S++
Sbjct: 102 GKEGVTDADEYVSKLLYRT--NKPVILVVNKVDNPEMR-NDIYDFYSLGLGDSFPVSSVH 158
Query: 341 GTGTGELLDLVCSEL 355
G GTG++LD + L
Sbjct: 159 GIGTGDVLDAIIDNL 173
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 90/198 (45%), Gaps = 41/198 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
R +++GRPNVGKS+L N ++G R I G TRD + SF E + ++DT G+
Sbjct: 186 RFSLIGRPNVGKSSLINAILGEERVIASPVAGTTRDAI-DTSFTDESGQAYTMIDTAGMR 244
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A AI+ S +++ +++
Sbjct: 245 KSGKVYEN-------------------TEKYSVMR--------AMRAIDRSDIVLMVINA 277
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSPL 334
+ G+ D+ IA + + K +I+ VNK ++ K V+ +F L ++P+
Sbjct: 278 EEGIRDYDKRIAGFAHE--AGKGMIIVVNKWDTIEKDNHTVARWEADIRDQFQFLTYAPI 335
Query: 335 P-ISAISGTGTGELLDLV 351
+SA++ L +L+
Sbjct: 336 IFVSAVTKQRLNRLPELI 353
>gi|240146998|ref|ZP_04745599.1| ribosome-associated GTPase EngA [Roseburia intestinalis L1-82]
gi|257200843|gb|EEU99127.1| ribosome-associated GTPase EngA [Roseburia intestinalis L1-82]
gi|291535193|emb|CBL08305.1| ribosome-associated GTPase EngA [Roseburia intestinalis M50/1]
gi|291539724|emb|CBL12835.1| ribosome-associated GTPase EngA [Roseburia intestinalis XB6B4]
Length = 441
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 104/193 (53%), Gaps = 32/193 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN L G +IV D PGVTRDR+Y W ++ F ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTLFNVLAGERISIVKDTPGVTRDRIYADVTWLDYHFTMIDTGGIEP 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
SK D+ + S + QA AI + VIIFL D +
Sbjct: 64 DSK-------DIIL----------------------SQMREQAEIAIATADVIIFLTDVR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL +D ++AD LR++ K ++L VNK +S K + V EF++LG P PISA S
Sbjct: 95 QGLQDSDSKVADMLRRS--GKPVVLVVNKVDSFEKFMPDVYEFYNLGIGDPYPISASSML 152
Query: 343 GTGELLDLVCSEL 355
G G++LD V
Sbjct: 153 GLGDMLDEVVKNF 165
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 98/213 (46%), Gaps = 40/213 (18%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P+VAI+G+PNVGKS+L N+L +R IV D G TRD + + E++ +DT G+
Sbjct: 178 PKVAIIGKPNVGKSSLINKLAQEDRVIVSDIAGTTRDAIDTDIRYNGKEYVFIDTAGL-- 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ + I E++ + I +A A+E + V I ++D
Sbjct: 236 --RRKNKIKEEIERYSII-----------------------RAVTAVERADVCIIVIDAT 270
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSEFWS--LGFSP----L 334
G+T D +IA + K II+AVNK E K I + +E L F P L
Sbjct: 271 EGVTEQDAKIAGIAHER--GKGIIIAVNKWDAIEKDDKTIYRHTEKIRQILSFMPYAEIL 328
Query: 335 PISAISGTGTGELLDLV--CSELKKVEVCIGFL 365
ISA SG +L D++ E + V G L
Sbjct: 329 FISAKSGQRLNKLFDMIDLVIENNSMRVATGVL 361
>gi|409350332|ref|ZP_11233492.1| GTPase Der [Lactobacillus equicursoris CIP 110162]
gi|407877498|emb|CCK85550.1| GTPase Der [Lactobacillus equicursoris CIP 110162]
Length = 435
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 106/194 (54%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVG+PNVGKS LFNR++ AIV D+PGVTRDR Y ++ W H+F ++DTGG+
Sbjct: 3 LPVVAIVGQPNVGKSTLFNRIINERVAIVEDQPGVTRDRNYAQASWMGHQFNIIDTGGI- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
ED +TI E I QA AIEE+ VI+ L D
Sbjct: 62 --------TWED----STIDEE-----------------IRAQAEIAIEEADVIVMLCDV 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+T DE IA L + K ++LAVNK ++P + + +F+SLG P+P+S G
Sbjct: 93 TKHVTDLDERIARLLYQ--AKKPVLLAVNKADNPEQR-NDIYDFYSLGLGDPIPVSGSHG 149
Query: 342 TGTGELLDLVCSEL 355
TG G+LLD V
Sbjct: 150 TGIGDLLDEVVKNF 163
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 97/199 (48%), Gaps = 40/199 (20%)
Query: 168 IVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSKS 227
++GRPNVGKS++ NRL+G +R IV +E G TRD + G+ +F +VDT G+ K
Sbjct: 179 VIGRPNVGKSSIVNRLLGEDRVIVANEEGTTRDAIDTPFTQGDTKFRVVDTAGIRRRGK- 237
Query: 228 QPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGLT 287
+ T + +V R A +A+E S V I ++D G+
Sbjct: 238 ------------------VYEKTEKYSVMR--------AMSAMERSDVAILVLDASTGIR 271
Query: 288 AADEEIADWLRKNYMDKFIILAVNKCESPRK---------GIMQVSEFWSLGFSPLP-IS 337
D+ +A + + + +I+AVNK + P+K +++ EF L ++P+ +S
Sbjct: 272 EQDKHVAGYAHEAGLG--VIIAVNKWDLPKKDSSSGKDFEAVIR-DEFSYLDYAPIVFVS 328
Query: 338 AISGTGTGELLDLVCSELK 356
A +G +L ++V K
Sbjct: 329 AKTGKNIDQLPEMVKQVYK 347
>gi|293604545|ref|ZP_06686950.1| GTP-binding protein EngA [Achromobacter piechaudii ATCC 43553]
gi|292817126|gb|EFF76202.1| GTP-binding protein EngA [Achromobacter piechaudii ATCC 43553]
Length = 454
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 103/193 (53%), Gaps = 32/193 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFNRL A+V D G+TRDR YG GE F+ +DTGG
Sbjct: 5 PVVALVGRPNVGKSTLFNRLTRSRAALVADFSGLTRDRHYGEGRVGEIPFIAIDTGGFEP 64
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
V+K +GI L + RQ AI E+ V++FLVD +
Sbjct: 65 VAK-----------------DGILLE------------MARQTRQAIAEADVVVFLVDAR 95
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGT 342
AGL A D EIA LRK+ + ++LAVNK E G +SEF LG P PISA G
Sbjct: 96 AGLNAHDHEIAQLLRKSGQQR-VLLAVNKAEGMGLG-PAISEFHELGLGQPYPISAAHGD 153
Query: 343 GTGELLDLVCSEL 355
G +L++L +L
Sbjct: 154 GIVDLIELALKDL 166
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 68/151 (45%), Gaps = 29/151 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVGRPNVGKS L N L+G R I D PG TRD + + L+DT G+
Sbjct: 190 KLAIVGRPNVGKSTLINTLMGEERVIAFDLPGTTRDAIEIDFDRDGRRYTLIDTAGLRKR 249
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K + E ++ T+ AIE S V++ ++D
Sbjct: 250 GKVFEAV-EKFSVIKTL--------------------------QAIEASNVVLLMLDAHT 282
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCES 315
++ D IA ++ + + +++A+NK +
Sbjct: 283 EISEQDAHIAGFVLET--GRAVVVAINKWDG 311
>gi|226227007|ref|YP_002761113.1| GTP-binding protein EngA [Gemmatimonas aurantiaca T-27]
gi|259645877|sp|C1A8T3.1|DER_GEMAT RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|226090198|dbj|BAH38643.1| GTP-binding protein EngA [Gemmatimonas aurantiaca T-27]
Length = 436
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/198 (38%), Positives = 108/198 (54%), Gaps = 34/198 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA+VGRPNVGKS LFNR++G AIV DE G TRDR +G + W +F LVDTGG
Sbjct: 3 LPVVAVVGRPNVGKSHLFNRVIGEATAIVSDEAGTTRDRHFGEAEWAGRQFWLVDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
++ED + M + I RQ AIEE+ +++F+VD
Sbjct: 61 --------LVEDSHLL-------------------MDTAIRRQVMQAIEEADLMLFVVDA 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISG 341
+ G+ +D I D LR + K +L NK + P EF+ LG + + P+SA +G
Sbjct: 94 KVGVHPSDARIVDILRNS--QKPWMLVANKVDDPAS--TDFYEFFRLGVTDVYPVSAQNG 149
Query: 342 TGTGELLDLVCSELKKVE 359
G+G+LLD V + + +VE
Sbjct: 150 KGSGDLLDAVVANIPEVE 167
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 97/217 (44%), Gaps = 48/217 (22%)
Query: 154 TIGNVPE-----HLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFW 208
+ N+PE RVA++GRPNVGKS+ NRL+G +R +V DE G TRD + +
Sbjct: 159 VVANIPEVEEEERDAVRVAVIGRPNVGKSSFVNRLLGEDRLVVSDESGTTRDAIDAPMRY 218
Query: 209 GEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATA 268
+ + + VDT G+ + Q I + + + L TR
Sbjct: 219 HDTDLVFVDTAGL----RRQSRIDDGVEFYSA-------LRTRR---------------- 251
Query: 269 AIEESCVIIFLVDGQAGLTAADEEIAD--WLRKNYMDKFIILAVNKCE---------SPR 317
AI+ S V I ++D GL D +IA W + +IL +NK + + +
Sbjct: 252 AIDSSDVCILMIDATEGLQNQDLKIATMAW----EAGRGLILVINKWDLYEDKTDKSADK 307
Query: 318 KGIMQVSEFWSLGFSP-LPISAISGTGTGELLDLVCS 353
V + L F P L SAISG ++LD+V S
Sbjct: 308 FKKEAVEKVPYLKFVPFLFTSAISGQRVTKVLDIVLS 344
>gi|408410415|ref|ZP_11181632.1| GTPase Der [Lactobacillus sp. 66c]
gi|407875409|emb|CCK83438.1| GTPase Der [Lactobacillus sp. 66c]
Length = 435
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 106/194 (54%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVG+PNVGKS LFNR++ AIV D+PGVTRDR Y ++ W H+F ++DTGG+
Sbjct: 3 LPVVAIVGQPNVGKSTLFNRIINERVAIVEDQPGVTRDRNYAQASWMGHQFNIIDTGGI- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
ED +TI E I QA AIEE+ VI+ L D
Sbjct: 62 --------TWED----STIDEE-----------------IRAQAEIAIEEADVIVMLCDV 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+T DE IA L + K ++LAVNK ++P + + +F+SLG P+P+S G
Sbjct: 93 TKHVTDLDERIARLLYQ--AKKPVLLAVNKADNPEQR-NDIYDFYSLGLGDPIPVSGSHG 149
Query: 342 TGTGELLDLVCSEL 355
TG G+LLD V
Sbjct: 150 TGIGDLLDEVVKNF 163
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 97/199 (48%), Gaps = 40/199 (20%)
Query: 168 IVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSKS 227
++GRPNVGKS++ NRL+G +R IV +E G TRD + G+ +F +VDT G+ K
Sbjct: 179 VIGRPNVGKSSIVNRLLGEDRVIVANEEGTTRDAIDTPFTQGDTKFRVVDTAGIRRRGK- 237
Query: 228 QPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGLT 287
+ T + +V R A +A+E S V I ++D G+
Sbjct: 238 ------------------VYEKTEKYSVMR--------AMSAMERSDVAILVLDASTGIR 271
Query: 288 AADEEIADWLRKNYMDKFIILAVNKCESPRK---------GIMQVSEFWSLGFSPLP-IS 337
D+ +A + + + +I+AVNK + P+K +++ EF L ++P+ +S
Sbjct: 272 EQDKHVAGYAHEAGLG--VIIAVNKWDLPKKDSSSGKDFEAVIR-DEFSYLDYAPIVFVS 328
Query: 338 AISGTGTGELLDLVCSELK 356
A +G +L ++V K
Sbjct: 329 AKTGKNIDQLPEMVKQVYK 347
>gi|261880032|ref|ZP_06006459.1| ribosome-associated GTPase EngA [Prevotella bergensis DSM 17361]
gi|270333272|gb|EFA44058.1| ribosome-associated GTPase EngA [Prevotella bergensis DSM 17361]
Length = 437
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 106/191 (55%), Gaps = 33/191 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRL AIV D G TRDR YG+ W EF +VDTGG V
Sbjct: 5 VAIVGRPNVGKSTLFNRLTRTRHAIVSDIAGTTRDRQYGKCNWNGREFSIVDTGGW--VV 62
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
KS +I ED I +Q A +E+ +I+FLVD + G
Sbjct: 63 KSD-DIFED--------------------------AIRQQVRIASDEADLILFLVDVETG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
LT DE++A LR + K IIL NK ++ + + +EF+ LG P+ ISAISG+GT
Sbjct: 96 LTDWDEDVAMVLRCS--RKPIILVANKVDNSGEAYIS-AEFYKLGLGDPVSISAISGSGT 152
Query: 345 GELLDLVCSEL 355
G+LLDLV L
Sbjct: 153 GDLLDLVVKTL 163
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 29/151 (19%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
PR A+VGRPN GKS+L N +G +R IV + G TRD +Y R +F LVDT G+
Sbjct: 176 PRFAVVGRPNAGKSSLVNAFIGEDRHIVTEIAGTTRDSIYTRFDKFGFDFYLVDTAGI-- 233
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ + + EDL + + ++ AIE S V I ++D
Sbjct: 234 --RRKNKVTEDLEFYSVM-----------------------RSIRAIENSDVCILMIDAT 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
G+ A D I +++N K +++ VNK +
Sbjct: 269 RGIEAQDMNIFQLIQRN--RKSLVVVVNKWD 297
>gi|452851445|ref|YP_007493129.1| GTPase Der [Desulfovibrio piezophilus]
gi|451895099|emb|CCH47978.1| GTPase Der [Desulfovibrio piezophilus]
Length = 497
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 104/186 (55%), Gaps = 25/186 (13%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VA+VGRPNVGKS LFNRL+ +RAI D PGVTRDR+YG + +F LVDTGG+
Sbjct: 1 MLPIVALVGRPNVGKSTLFNRLLRKSRAITHDMPGVTRDRIYGECQMNDVKFDLVDTGGM 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ S++ P + +D I QA AIEE+ IIF+VD
Sbjct: 61 VLESEATPELSKDFE-----------------------DEIFEQAREAIEEANAIIFVVD 97
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLPISAISG 341
G+ GLT D++ A+++R++ K +++ VNK + S+F +G LP+SA G
Sbjct: 98 GKEGLTPLDQQAAEYVRRS--GKPVMMLVNKVDGSEFSAAMTSDFHIMGLDLLPVSAAHG 155
Query: 342 TGTGEL 347
E+
Sbjct: 156 YNLSEV 161
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 92/218 (42%), Gaps = 36/218 (16%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R+ ++GRPN GKS++ N ++G +R IV D G TRD + + VDT GV
Sbjct: 187 RLTMLGRPNAGKSSIINAIIGQDRLIVSDVAGTTRDSIDVTFEKKNKRYTFVDTAGV--- 243
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + NI + L + I +A + S V I +D
Sbjct: 244 -RRRANIQDHLEKISVI-----------------------RALKNSKRSDVTILTIDITL 279
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCE-SPRKGIMQVSEFWSLGFSPLP------IS 337
G+ D+ + ++L K I+ VNK + PR Q + + +P S
Sbjct: 280 GVGRQDKRLIEFLAKEKTP--FIVVVNKADLVPRNETNQALDAFRRELRIIPHVPIVMTS 337
Query: 338 AISGTGTGELLDLVCSELKKVEVCIGFLLICNAITKIF 375
A G G G+LL + + K+ E+ IG ++ ++ +
Sbjct: 338 AQKGVGIGKLLPMAEAMRKECEIRIGTGILNRSLQAVL 375
>gi|330830064|ref|YP_004393016.1| GTP-binding protein engA [Aeromonas veronii B565]
gi|406676656|ref|ZP_11083841.1| GTPase Der [Aeromonas veronii AMC35]
gi|423200193|ref|ZP_17186773.1| GTPase Der [Aeromonas veronii AER39]
gi|423206315|ref|ZP_17192871.1| GTPase Der [Aeromonas veronii AMC34]
gi|423209232|ref|ZP_17195786.1| GTPase Der [Aeromonas veronii AER397]
gi|328805200|gb|AEB50399.1| GTP-binding protein engA [Aeromonas veronii B565]
gi|404617090|gb|EKB14026.1| GTPase Der [Aeromonas veronii AER397]
gi|404620164|gb|EKB17063.1| GTPase Der [Aeromonas veronii AER39]
gi|404621867|gb|EKB18732.1| GTPase Der [Aeromonas veronii AMC34]
gi|404624970|gb|EKB21787.1| GTPase Der [Aeromonas veronii AMC35]
Length = 498
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 105/193 (54%), Gaps = 34/193 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+ P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YG++ GE EF++VDTGG+
Sbjct: 1 MTPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGELEFIVVDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
EGI L E Q+ AIEE+ V++F+VD
Sbjct: 61 DGTE------------------EGIELKMAE------------QSLLAIEEADVVLFMVD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAIS 340
+AGLTAAD+ IA+ LRK + K + L NK + G VSEF+ L + I+A
Sbjct: 91 ARAGLTAADQAIAEHLRKAH--KKVFLVANKTDGI-DGDSAVSEFYGLALGEVYQIAAAH 147
Query: 341 GTGTGELLDLVCS 353
G G LL+L +
Sbjct: 148 GRGVLSLLELALA 160
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 40/210 (19%)
Query: 147 KQKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRS 206
K+ ++T ++P + AIVGRPNVGKS L NR++G +R IV D PG TRD +Y
Sbjct: 200 KEDTKETPFADLP----IKFAIVGRPNVGKSTLTNRMLGEDRVIVYDMPGTTRDSVYIPM 255
Query: 207 FWGEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQA 266
E +++++DT GV K + E ++ T+
Sbjct: 256 ERDEQKYVVIDTAGVRRRGKVHETV-EKFSVIKTL------------------------- 289
Query: 267 TAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQ--VS 324
AIE++ V + ++D Q +T D I ++ + + ++L VNK + + + + +
Sbjct: 290 -KAIEDANVCLLVIDAQETITDQDLSILGYVL--HAGRSVVLVVNKWDGLDQKVKEDVKN 346
Query: 325 EF-WSLGFSPLP----ISAISGTGTGELLD 349
E LGF ISA+ G+G G L +
Sbjct: 347 ELDRRLGFIDFARVHFISALHGSGVGHLFE 376
>gi|317153825|ref|YP_004121873.1| ribosome-associated GTPase EngA [Desulfovibrio aespoeensis Aspo-2]
gi|316944076|gb|ADU63127.1| ribosome-associated GTPase EngA [Desulfovibrio aespoeensis Aspo-2]
Length = 497
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 107/190 (56%), Gaps = 25/190 (13%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VA+VGRPNVGKS LFNRL+ +RAI D PGVTRDR+YG G+ +F LVDTGG+
Sbjct: 1 MLPIVALVGRPNVGKSTLFNRLLRKSRAITHDLPGVTRDRIYGECQMGDVKFDLVDTGGM 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ S++ P + +D I QA AI E+ I+F+VD
Sbjct: 61 VLESEATPELSKDFE-----------------------DEIFEQAREAINEAHAILFVVD 97
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLPISAISG 341
G+ G++ DE+ A+++R++ K +++ VNK +S +EF +LG P+SA G
Sbjct: 98 GKQGMSPLDEQAAEFVRRS--GKPVMVLVNKVDSHEVAAQGTAEFHALGLPVFPVSAAHG 155
Query: 342 TGTGELLDLV 351
E+ + V
Sbjct: 156 YNLHEVREKV 165
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 95/216 (43%), Gaps = 32/216 (14%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R+ ++GRPN GKS++ NR++G +R IV D G TRD + + VDT GV
Sbjct: 187 RLTMLGRPNAGKSSIINRIIGTDRLIVSDVAGTTRDSIDVTFERQGKRYTFVDTAGV--- 243
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + NI E L + I +A + S V I ++D
Sbjct: 244 -RRRANIQEHLEKISVI-----------------------RALKNSKRSDVTILVIDITL 279
Query: 285 GLTAADEEIADWLRKNYMDKFIILA----VNKCESPRKGIMQVSEFWSLGFSPLPI-SAI 339
G+ D+ + ++L K ++ + + E+ R E + + PL + SA
Sbjct: 280 GVGRQDKRLIEFLAKEKTPFMVVCNKADLIPRSETKRALEAFREELRIIPYVPLIMTSAN 339
Query: 340 SGTGTGELLDLVCSELKKVEVCIGFLLICNAITKIF 375
G G G+++ L + ++ E+ IG ++ A+ ++
Sbjct: 340 KGVGIGKIIPLAETLRRECEIRIGTGVLNRALAQVL 375
>gi|452992491|emb|CCQ96022.1| GTPase essential for ribosome 50S subunit assembly [Clostridium
ultunense Esp]
Length = 440
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 107/193 (55%), Gaps = 33/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P V IVGRPNVGKS LFNR+VG AI D PGVTRDR+Y + W F L+DTGG+
Sbjct: 6 PVVCIVGRPNVGKSTLFNRIVGRRIAITEDNPGVTRDRIYAEAEWLNKYFNLIDTGGLEP 65
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
S+ E IP+ R+ QA AI+ + VI+F+VDG
Sbjct: 66 ESE-----------------EIIPINIRQ------------QAEIAIDTADVILFVVDGL 96
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGT 342
G+T+ DE+IA+ LRK+ K ++L NK +S K ++ EF+ LG SP+ ISA G
Sbjct: 97 DGVTSTDEDIANILRKS--GKEVLLVCNKIDS-HKTPDEIFEFYELGMGSPIIISAEQGL 153
Query: 343 GTGELLDLVCSEL 355
G G+LLD V
Sbjct: 154 GIGDLLDEVIKHF 166
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 104/219 (47%), Gaps = 43/219 (19%)
Query: 154 TIGNVPEHL-------LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRS 206
I + PEH L RVA++G+PNVGKS+L N ++G R IV D PG TRD +
Sbjct: 162 VIKHFPEHKDTEYDDELVRVAVIGKPNVGKSSLINNILGEERVIVTDIPGTTRDAIDTYF 221
Query: 207 FWGEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQA 266
+GE +++ +DT G+ + + +I E++ + + +
Sbjct: 222 TYGEDKYVFIDTAGL----RRKRSIYENVERYSVV-----------------------RT 254
Query: 267 TAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
A++ S + + ++DG G++ D +IA + +N K II+AVNK + K F
Sbjct: 255 LTAVDRSDICVLMIDGTEGVSEQDTKIAGYAHEN--GKGIIIAVNKWDLMEKETNTHLNF 312
Query: 327 W-----SLGF-SPLPISAISGTGTGELLDLVCSELKKVE 359
LGF S PI IS TG +D + LK V+
Sbjct: 313 EKDIRNKLGFISYAPIVFISAK-TGRRVDKLFQLLKVVD 350
>gi|321496287|gb|EAQ39318.2| GTP-binding protein EngA [Dokdonia donghaensis MED134]
Length = 450
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 107/191 (56%), Gaps = 33/191 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS FNRLV AIV GVTRDR YG++ W EF ++DTGG +
Sbjct: 20 VAIVGRPNVGKSTFFNRLVQRREAIVDAVSGVTRDRHYGKTDWNGREFTVIDTGGYV--- 76
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+G + I + I++Q AI+E+ IIF+VD + G
Sbjct: 77 ---------------VGSDDI-----------FEAEIDKQVELAIDEADAIIFMVDVEHG 110
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGTGT 344
+T DEE+A+ LR++ K I LAVNK ++ ++ V EF++LG I+A +G+GT
Sbjct: 111 ITGMDEEVANLLRRS--KKPIFLAVNKVDNNKRAADAV-EFYNLGLGDFYTIAATNGSGT 167
Query: 345 GELLDLVCSEL 355
G+LLD V L
Sbjct: 168 GDLLDAVVEAL 178
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 74/164 (45%), Gaps = 29/164 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LPR A+VGRPN GKS+ N L+G R IV D G TRD M + EF LVDT G+
Sbjct: 190 LPRFAVVGRPNAGKSSFINALIGEERYIVTDIAGTTRDAMDTKYNRYGFEFNLVDTAGI- 248
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + + EDL + + ++ AIE + V++ +VD
Sbjct: 249 ---RRKAKVKEDLEFYSVM-----------------------RSVRAIEHADVVLLVVDA 282
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G + I WL + K I++ VNK + K + EF
Sbjct: 283 TRGFDGQVQNIF-WLAER-NRKGIVILVNKWDLVEKKTNTMKEF 324
>gi|343501753|ref|ZP_08739622.1| GTP-binding protein Der [Vibrio tubiashii ATCC 19109]
gi|418481164|ref|ZP_13050212.1| GTP-binding protein Der [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
gi|342816878|gb|EGU51770.1| GTP-binding protein Der [Vibrio tubiashii ATCC 19109]
gi|384571116|gb|EIF01654.1| GTP-binding protein Der [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
Length = 495
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 108/192 (56%), Gaps = 40/192 (20%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YG++ GEHEF+++DTGG+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
T E +M Q+ AAI+E+ V++F+VD
Sbjct: 61 --------------------------DGTEEGVETKMAE----QSLAAIDEADVVLFMVD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSPL-PIS 337
G+AGLT +D I++ LRK ++K +L VNK + GI ++FW LG + I+
Sbjct: 91 GRAGLTPSDIAISNHLRK--IEKPSMLVVNKVD----GIDADAASADFWQLGVENMYQIA 144
Query: 338 AISGTGTGELLD 349
A G G G L+D
Sbjct: 145 AAHGRGVGALID 156
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 48/224 (21%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS L NR++G R +V D PG TRD +Y E++L+DT GV
Sbjct: 208 KLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRRR 267
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + E ++ T+ A+E++ V++ ++D +
Sbjct: 268 KRINETV-EKFSVVKTL--------------------------KAVEDANVVLLVIDARE 300
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI-MQVSEFWS------LGFSPLP-- 335
++ D + + + I+LAVNK + G+ M V E LGF
Sbjct: 301 NISDQDLSLLGFALN--AGRSIVLAVNKWD----GLDMDVKEHVKKELDRRLGFVDFARI 354
Query: 336 --ISAISGTGTGELLDLVCSELKKVEVCIGFLLICNAITKIFHI 377
ISA+ GTG G L + V K +G + +T+I +
Sbjct: 355 HFISALHGTGVGHLFESVQEAYKSATTRVG----TSVLTRIMKM 394
>gi|87118473|ref|ZP_01074372.1| GTPase EngA [Marinomonas sp. MED121]
gi|86166107|gb|EAQ67373.1| GTPase EngA [Marinomonas sp. MED121]
Length = 454
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 109/190 (57%), Gaps = 34/190 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P +A+VGRPNVGKS LFN+L A+V D PG+TRDR YG GEHEF+++DTGG
Sbjct: 1 MIPVIALVGRPNVGKSTLFNQLTRSRDALVADYPGLTRDRKYGDGRIGEHEFIVIDTGG- 59
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+S + I E +A RQ+ AIEE+ ++FLVD
Sbjct: 60 --ISGDEMGIDEKMA---------------------------RQSLLAIEEADTVLFLVD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAIS 340
G+ GL ADE IA+ LR++ F++ VNK + + + +++F+S+G L PI+A
Sbjct: 91 GRHGLNPADEMIANHLRRSNKPTFMV--VNKTDGINEDV-ALADFYSIGLGDLHPIAASH 147
Query: 341 GTGTGELLDL 350
G G +L+D+
Sbjct: 148 GKGVHKLIDI 157
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 89/194 (45%), Gaps = 36/194 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R+ ++GRPNVGKS L NR++G +R +V D PG TRD +Y E E+ L+DT GV
Sbjct: 181 RIGVIGRPNVGKSTLVNRMLGEDRVVVYDMPGTTRDSVYIPYIRNEKEYTLIDTAGVRR- 239
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K +E +I T+ AI+++ V+I ++DG
Sbjct: 240 RKHIKEAVEKFSIVKTL--------------------------KAIQDANVVIVVIDGHE 273
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSEFWSLGFSPLP----IS 337
L D + ++ + +++AVNK + K ++ LGF P IS
Sbjct: 274 DLVEQDLHMIGYVID--AGRGLVIAVNKWDGLDQYSKERIKTEVERRLGFVPYAKVHYIS 331
Query: 338 AISGTGTGELLDLV 351
A+ GT G L D +
Sbjct: 332 ALHGTAVGNLYDTI 345
>gi|261252182|ref|ZP_05944755.1| GTP-binding protein EngA [Vibrio orientalis CIP 102891 = ATCC
33934]
gi|417955681|ref|ZP_12598690.1| GTP-binding protein Der [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|260935573|gb|EEX91562.1| GTP-binding protein EngA [Vibrio orientalis CIP 102891 = ATCC
33934]
gi|342812335|gb|EGU47339.1| GTP-binding protein Der [Vibrio orientalis CIP 102891 = ATCC 33934]
Length = 495
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 108/192 (56%), Gaps = 40/192 (20%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YG++ GEHEF+++DTGG+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
T E +M Q+ AAI+E+ V++F+VD
Sbjct: 61 --------------------------DGTEEGVETKMAE----QSLAAIDEADVVLFMVD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSPL-PIS 337
G+AGLT +D I++ LRK ++K +L VNK + GI ++FW LG + I+
Sbjct: 91 GRAGLTPSDIAISNHLRK--IEKPSMLVVNKVD----GIDADAASADFWQLGVENMYQIA 144
Query: 338 AISGTGTGELLD 349
A G G G L+D
Sbjct: 145 AAHGRGVGALID 156
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 99/220 (45%), Gaps = 40/220 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS L NR++G R +V D PG TRD +Y E++L+DT GV
Sbjct: 208 KLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRRR 267
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + E ++ T+ A+E++ V++ ++D +
Sbjct: 268 KRINETV-EKFSVVKTL--------------------------KAVEDANVVLLVIDARE 300
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSEFWSLGFSPLP----IS 337
++ D + + + I+LAVNK ++ K ++ LGF IS
Sbjct: 301 NISDQDLSLLGFALN--AGRSIVLAVNKWDGLDTDVKEHVKKELDRRLGFVDFARIHFIS 358
Query: 338 AISGTGTGELLDLVCSELKKVEVCIGFLLICNAITKIFHI 377
A+ GTG G L + V K +G + +T+I +
Sbjct: 359 ALHGTGVGHLFESVQEAYKSATTRVG----TSVLTRIMKM 394
>gi|421532161|ref|ZP_15978530.1| GTP-binding protein Der [Streptococcus agalactiae STIR-CD-17]
gi|403642669|gb|EJZ03495.1| GTP-binding protein Der [Streptococcus agalactiae STIR-CD-17]
Length = 436
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/195 (38%), Positives = 106/195 (54%), Gaps = 34/195 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 2 VLPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTTGEWLNRKFSLIDTGGI 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+V A I+ QA A+ E+ VI+F+V
Sbjct: 62 DDVD------------------------------APFMEQIKHQADIAMTEADVIVFVVS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE ++ L K +K +ILAVNK ++P + +F+SLG P +S++
Sbjct: 92 GKEGVTDADEYVSRILYKT--NKPVILAVNKVDNPEMR-NDIYDFYSLGLGDPYLLSSVH 148
Query: 341 GTGTGELLDLVCSEL 355
G GTG++LD + L
Sbjct: 149 GIGTGDILDAIVENL 163
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 81/179 (45%), Gaps = 38/179 (21%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
R +++GRPNVGKS+L N ++G +R I G TRD + + E+ ++DT G+
Sbjct: 176 RFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTNFVDSQGQEYTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R + AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------SMRAIDRSDVVLMVINAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSE--------FWSLGFSPL 334
G+ D+ IA + + K II+ VNK ++ K VS+ F L ++P+
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGIIIVVNKWDTIEKDNHTVSQWEADIRDNFQFLSYAPI 325
>gi|320353154|ref|YP_004194493.1| ribosome-associated GTPase EngA [Desulfobulbus propionicus DSM
2032]
gi|320121656|gb|ADW17202.1| ribosome-associated GTPase EngA [Desulfobulbus propionicus DSM
2032]
Length = 445
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 104/196 (53%), Gaps = 33/196 (16%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VA++GRPNVGKS LFNR+V A+V PGVTRDR Y R W EH F+LVDTGG+ +
Sbjct: 9 VALIGRPNVGKSTLFNRMVKRRDALVDPTPGVTRDRHYARVSWEEHPFILVDTGGIDD-- 66
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
ED IT + I QA AIEE+ VI FL+DG+ G
Sbjct: 67 -------EDDTIT---------------------NHIRHQALLAIEEADVIFFLMDGREG 98
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGTGT 344
LT +D EI D LR+ +K + VNK +SP ++ FW LG L +S G G
Sbjct: 99 LTPSDIEIVDLLRRT--EKKVFFIVNKIDSPEIEDALLAPFWELGVDQLWALSGDHGYGY 156
Query: 345 GELLDLVCSELKKVEV 360
L++ + L+K ++
Sbjct: 157 QTLMEGLLPYLEKTDL 172
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 89/194 (45%), Gaps = 40/194 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R+A +GRPNVGKS++ N ++G R +V D G TRD + + ++L+DT G+
Sbjct: 182 RIAFLGRPNVGKSSMVNAIIGQERMVVSDIAGTTRDSVDTLVTRDPYTYLLIDTAGIRRK 241
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K+ + +E ++ +A A+ + + L+D +
Sbjct: 242 GKTT-DKLEKFSVL--------------------------KALKALGRCDIALVLIDAEE 274
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCE------SPRKGIMQVSEFWSLGFSP----L 334
G+T D ++ + + + +I+ +NK + ++ +MQ E ++ F P L
Sbjct: 275 GITEQDTKVIGYTQDQ--GRALIVLINKWDLIKDDKKRQEQLMQEVEI-AIKFIPFAPVL 331
Query: 335 PISAISGTGTGELL 348
+SA++GTG L
Sbjct: 332 KVSALTGTGIKRLF 345
>gi|288803890|ref|ZP_06409315.1| ribosome-associated GTPase EngA [Prevotella melaninogenica D18]
gi|288333655|gb|EFC72105.1| ribosome-associated GTPase EngA [Prevotella melaninogenica D18]
Length = 437
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 106/194 (54%), Gaps = 33/194 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRL AIV D G TRDR YG+ W EF +VDTGG V
Sbjct: 5 VAIVGRPNVGKSTLFNRLTQTRHAIVSDTAGTTRDRQYGKCQWNGREFSIVDTGGW--VV 62
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
KS +I ED I +Q A EE+ +++F+VD + G
Sbjct: 63 KSD-DIFED--------------------------AIRKQVLVATEEADLVLFVVDTETG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+T DE++A LR+ + ++L NK ++ + Q +EF+ LG P+ ISA +G GT
Sbjct: 96 ITDWDEDVALILRRTKLP--VLLVANKVDNSGE-YYQAAEFYKLGLGEPICISAATGGGT 152
Query: 345 GELLDLVCSELKKV 358
G+LLD++ LK V
Sbjct: 153 GDLLDILLENLKDV 166
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 80/164 (48%), Gaps = 33/164 (20%)
Query: 155 IGNVPEHL----LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE 210
+ +VPE +PR A+VGRPN GKS++ N +G +R IV + G TRD +Y R
Sbjct: 163 LKDVPEEAVDQDIPRFAVVGRPNAGKSSIINAFIGEDRNIVTEIAGTTRDSIYTRYTKFG 222
Query: 211 HEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAI 270
+F LVDT G+ + + + EDL + + ++ +I
Sbjct: 223 FDFYLVDTAGI----RRKNKVSEDLEFYSVM-----------------------RSIRSI 255
Query: 271 EESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
E S V I ++D G+ A D I +++N +K +++ VNK +
Sbjct: 256 ENSEVCILMLDATRGIEAQDMNIFQLIQRN--NKSLVVVVNKWD 297
>gi|302345898|ref|YP_003814251.1| ribosome-associated GTPase EngA [Prevotella melaninogenica ATCC
25845]
gi|302149910|gb|ADK96172.1| ribosome-associated GTPase EngA [Prevotella melaninogenica ATCC
25845]
Length = 437
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 106/194 (54%), Gaps = 33/194 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRL AIV D G TRDR YG+ W EF +VDTGG V
Sbjct: 5 VAIVGRPNVGKSTLFNRLTQTRHAIVSDTAGTTRDRQYGKCQWNGREFSIVDTGGW--VV 62
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
KS +I ED I +Q A EE+ +++F+VD + G
Sbjct: 63 KSD-DIFED--------------------------AIRKQVLVATEEADLVLFVVDTETG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+T DE++A LR+ + ++L NK ++ + Q +EF+ LG P+ ISA +G GT
Sbjct: 96 ITDWDEDVALILRRTKLP--VLLVANKVDNSGE-YYQAAEFYKLGLGEPICISAATGGGT 152
Query: 345 GELLDLVCSELKKV 358
G+LLD++ LK V
Sbjct: 153 GDLLDILLENLKDV 166
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 80/164 (48%), Gaps = 33/164 (20%)
Query: 155 IGNVPEHL----LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE 210
+ +VPE +PR A+VGRPN GKS++ N +G +R IV + G TRD +Y R
Sbjct: 163 LKDVPEEAVDQDIPRFAVVGRPNAGKSSIINAFIGEDRNIVTEIAGTTRDSIYTRYTKFG 222
Query: 211 HEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAI 270
+F LVDT G+ + + + EDL + + ++ +I
Sbjct: 223 FDFYLVDTAGI----RRKNKVSEDLEFYSVM-----------------------RSIRSI 255
Query: 271 EESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
E S V I ++D G+ A D I +++N +K +++ VNK +
Sbjct: 256 ENSDVCILMLDATRGIEAQDMNIFQLIQRN--NKSLVVVVNKWD 297
>gi|380302433|ref|ZP_09852126.1| cytidylate kinase [Brachybacterium squillarum M-6-3]
Length = 751
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 110/196 (56%), Gaps = 34/196 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA+VGRPNVGKS L NR++G A+V D PGVTRDR++ + W +F LVDTGG
Sbjct: 317 LPVVAVVGRPNVGKSTLVNRILGRREAVVEDVPGVTRDRVFYEAEWTGRDFWLVDTGG-- 374
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
E+ A EGI E QA A++ + V++F+VD
Sbjct: 375 ---------WEEKA-------EGIAYRVAE------------QAELAVDLADVVMFVVDA 406
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
G+T DE++ LR++ ++ I+L NK + PR G ++ + W+LG P P+SA+ G
Sbjct: 407 NVGITTTDEQLLKVLRRS--ERPIVLVANKVDDPR-GELEAAALWNLGLGEPHPVSALHG 463
Query: 342 TGTGELLDLVCSELKK 357
G+G+LLD V + L +
Sbjct: 464 RGSGDLLDAVMAVLPR 479
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 40/66 (60%)
Query: 156 GNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFML 215
G +H R+A+VGRPNVGKS+L NRL G NR +V + G TRD + + E+
Sbjct: 483 GAAVDHGPRRIALVGRPNVGKSSLLNRLAGENRVVVDELAGTTRDPVDEKIEIDGREWTF 542
Query: 216 VDTGGV 221
VDT G+
Sbjct: 543 VDTAGI 548
>gi|117620764|ref|YP_856299.1| GTP-binding protein EngA [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|166224301|sp|A0KJ48.1|DER_AERHH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|117562171|gb|ABK39119.1| GTP-binding protein EngA [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 499
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 105/193 (54%), Gaps = 34/193 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+ P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YG++ GE EF++VDTGG+
Sbjct: 1 MTPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGELEFIVVDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
EGI L E Q+ AIEE+ V++F+VD
Sbjct: 61 DGTE------------------EGIELKMAE------------QSLLAIEEADVVLFMVD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAIS 340
+AGLTAAD+ IA+ LRK + K + L NK + G VSEF+ L + ++A
Sbjct: 91 ARAGLTAADQAIAEHLRKTH--KKVFLVANKTDGI-DGDSAVSEFYGLALGEVYQMAAAH 147
Query: 341 GTGTGELLDLVCS 353
G G LL+L +
Sbjct: 148 GRGVLSLLELALA 160
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 40/210 (19%)
Query: 147 KQKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRS 206
K+ ++T ++P + AIVGRPNVGKS L NR++G +R IV D PG TRD +Y
Sbjct: 200 KEDTKETPFADLP----IKFAIVGRPNVGKSTLTNRMLGEDRVIVYDMPGTTRDSVYIPM 255
Query: 207 FWGEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQA 266
E +++++DT GV K + E ++ T+
Sbjct: 256 ERDEQKYVIIDTAGVRRRGKVHETV-EKFSVIKTL------------------------- 289
Query: 267 TAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQ--VS 324
AIE++ V + ++D Q +T D I ++ + ++L VNK + + + + +
Sbjct: 290 -KAIEDANVCLLVIDAQETITDQDLSILGFVLNT--GRSVVLVVNKWDGLDQKVKEDVKN 346
Query: 325 EF-WSLGFSPLP----ISAISGTGTGELLD 349
E LGF ISA+ G+G G L +
Sbjct: 347 ELDRRLGFIDFARVHFISALHGSGVGHLFE 376
>gi|152967059|ref|YP_001362843.1| GTP-binding protein EngA [Kineococcus radiotolerans SRS30216]
gi|151361576|gb|ABS04579.1| small GTP-binding protein [Kineococcus radiotolerans SRS30216]
Length = 496
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 110/211 (52%), Gaps = 34/211 (16%)
Query: 157 NVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLV 216
+ P LP +A+VGRPNVGKS L NR++G A+V D PGVTRDR+ + W +F LV
Sbjct: 53 DAPTGPLPVLAVVGRPNVGKSTLVNRIIGRREAVVEDVPGVTRDRVAYPANWAGRDFTLV 112
Query: 217 DTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVI 276
DTGG E A EG+ LA + QA AIE + +
Sbjct: 113 DTGG-----------WEAKA-------EGLNLA------------VADQAELAIELADAV 142
Query: 277 IFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLP 335
+F+VDG G TA+DE++ LR++ + + L NK + PR+ + +E W LG P P
Sbjct: 143 MFVVDGTVGATASDEQVVRLLRRS--GRPVTLIANKVDGPRQEAL-ATELWGLGLGEPHP 199
Query: 336 ISAISGTGTGELLDLVCSELKKVEVCIGFLL 366
+SA+ G GTG+ LD L V G L+
Sbjct: 200 VSALHGRGTGDALDAAVKTLPAVSAVGGGLI 230
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 138 TDDRKDSGKKQKKRKTTIGN--VPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEP 195
T D D+ K + +G +PE RVA++GRPNVGKS++ N+L G R +V
Sbjct: 208 TGDALDAAVKTLPAVSAVGGGLIPEGGPRRVALLGRPNVGKSSMLNKLAGSERVVVHPTA 267
Query: 196 GVTRDRMYGRSFWGEHEFMLVDTGGV 221
G TRD + G + VDT G+
Sbjct: 268 GTTRDPVDEIIELGGRTWRFVDTAGI 293
>gi|325855153|ref|ZP_08171776.1| ribosome biogenesis GTPase Der [Prevotella denticola CRIS 18C-A]
gi|325483890|gb|EGC86834.1| ribosome biogenesis GTPase Der [Prevotella denticola CRIS 18C-A]
Length = 437
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 106/192 (55%), Gaps = 33/192 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRL AIV D G TRDR YG+ W EF +VDTGG V
Sbjct: 5 VAIVGRPNVGKSTLFNRLTQTRHAIVSDTAGTTRDRQYGKCQWNGREFSVVDTGGW--VV 62
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
KS +I ED I +Q A EE+ +++FLVD + G
Sbjct: 63 KSD-DIFED--------------------------AIRKQVLVATEEADLVLFLVDTETG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+T DE++A LR+ + ++L NK ++ + Q +EF+ LG P+ +SA +G GT
Sbjct: 96 VTDWDEDVAMILRRTKLP--VLLVANKVDNSGE-YYQAAEFYKLGLGEPICVSAATGGGT 152
Query: 345 GELLDLVCSELK 356
G+LLD++ +LK
Sbjct: 153 GDLLDILLEKLK 164
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 75/152 (49%), Gaps = 29/152 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
+PR A+VGRPN GKS++ N +G +R IV + G TRD +Y R +F LVDT G+
Sbjct: 175 IPRFAVVGRPNAGKSSIINAFIGEDRNIVTEIAGTTRDSIYTRYTKFGFDFYLVDTAGI- 233
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + + EDL + + ++ +IE S V I ++D
Sbjct: 234 ---RRKNKVTEDLEFYSVM-----------------------RSIRSIENSDVCILMLDA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
G+ A D I +++N +K +++ VNK +
Sbjct: 268 TRGIEAQDMNIFQLIQRN--NKSLVVVVNKWD 297
>gi|327312576|ref|YP_004328013.1| ribosome biogenesis GTPase Der [Prevotella denticola F0289]
gi|326944058|gb|AEA19943.1| ribosome biogenesis GTPase Der [Prevotella denticola F0289]
Length = 437
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 106/192 (55%), Gaps = 33/192 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRL AIV D G TRDR YG+ W EF +VDTGG V
Sbjct: 5 VAIVGRPNVGKSTLFNRLTQTRHAIVSDTAGTTRDRQYGKCQWNGREFSVVDTGGW--VV 62
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
KS +I ED I +Q A EE+ +++FLVD + G
Sbjct: 63 KSD-DIFED--------------------------AIRKQVLVATEEADLVLFLVDTETG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+T DE++A LR+ + ++L NK ++ + Q +EF+ LG P+ +SA +G GT
Sbjct: 96 VTDWDEDVAMILRRTKLP--VLLVANKVDNSGE-YYQAAEFYKLGLGEPICVSAATGGGT 152
Query: 345 GELLDLVCSELK 356
G+LLD++ +LK
Sbjct: 153 GDLLDILLEKLK 164
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 75/152 (49%), Gaps = 29/152 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
+PR A+VGRPN GKS++ N +G +R IV + G TRD +Y R +F LVDT G+
Sbjct: 175 IPRFAVVGRPNAGKSSIINAFIGEDRNIVTEIAGTTRDSIYTRYTKFGFDFYLVDTAGI- 233
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + + EDL + + ++ +IE S V I ++D
Sbjct: 234 ---RRKNKVTEDLEFYSVM-----------------------RSIRSIENSDVCILMLDA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
G+ A D I +++N +K +++ VNK +
Sbjct: 268 TRGIEAQDMNIFQLIQRN--NKSLVVVVNKWD 297
>gi|410594999|ref|YP_006951726.1| GTPase Der [Streptococcus agalactiae SA20-06]
gi|410518638|gb|AFV72782.1| GTPase Der [Streptococcus agalactiae SA20-06]
Length = 436
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/195 (38%), Positives = 106/195 (54%), Gaps = 34/195 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VAIVGRPNVGKS LFNR+ G +IV D GVTRDR+Y W +F L+DTGG+
Sbjct: 2 VLPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTTGEWLNRKFSLIDTGGI 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+V A I+ QA A+ E+ VI+F+V
Sbjct: 62 DDVD------------------------------APFMEQIKHQADIAMTEADVIVFVVS 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T ADE ++ L K +K +ILAVNK ++P + +F+SLG P +S++
Sbjct: 92 GKEGVTDADEYVSRILYKT--NKPVILAVNKVDNPEMR-NDIYDFYSLGLGDPYLLSSVH 148
Query: 341 GTGTGELLDLVCSEL 355
G GTG++LD + L
Sbjct: 149 GIGTGDILDAIVENL 163
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 81/179 (45%), Gaps = 38/179 (21%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
R +++GRPNVGKS+L N ++G +R I G TRD + + E+ ++DT G+
Sbjct: 176 RFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTNFVDSQGQEYTMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R + AI+ S V++ +++ +
Sbjct: 236 SGKVYEN-------------------TEKYSVMR--------SMRAIDRSDVVLMVINAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSE--------FWSLGFSPL 334
G+ D+ IA + + K II+ VNK ++ K VS+ F L ++P+
Sbjct: 269 EGIREYDKRIAGFAHE--AGKGIIIVVNKWDTIEKDNHTVSQWEADIRDNFQFLSYAPI 325
>gi|317121946|ref|YP_004101949.1| ribosome-associated GTPase EngA [Thermaerobacter marianensis DSM
12885]
gi|315591926|gb|ADU51222.1| ribosome-associated GTPase EngA [Thermaerobacter marianensis DSM
12885]
Length = 455
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 103/193 (53%), Gaps = 34/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNR++ AI D PGVTRDR+Y + W F LVDTGG+
Sbjct: 3 PIVAIVGRPNVGKSTLFNRIIERRLAIEDDVPGVTRDRLYADTDWAGRAFTLVDTGGLAE 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
PL + + RQ AA+ E+ V++ +VDGQ
Sbjct: 63 GDD--------------------PLTVQ----------VRRQVEAAVREADVLVMVVDGQ 92
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
AG+T ADEE+A LR+ K ILAVNK + P +Q +F+ LG P+P++A G
Sbjct: 93 AGVTPADEEVARLLRQ--AQKPTILAVNKVDDPHWDGVQY-DFFRLGLGEPIPVAAGPGR 149
Query: 343 GTGELLDLVCSEL 355
G+LLD V L
Sbjct: 150 NVGDLLDAVVRAL 162
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 76/149 (51%), Gaps = 12/149 (8%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS+L NRL+G R +V D PG TRD + GE F +DT G+ S
Sbjct: 189 VAIVGRPNVGKSSLVNRLLGEERVVVSDIPGTTRDAVDVLWRRGERVFRFIDTAGLRRKS 248
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAV----ARMPSMIE--RQATAAIEESCVIIFL 279
+ + +D+ +T+ + LA + A AR P+ + R A A+EE +
Sbjct: 249 R----VKDDVEFYSTLRTQRA-LARADVACLVLDARDPATDQDKRIAGMALEEGKACVLA 303
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIIL 308
V+ + L A + AD R+ ++ L
Sbjct: 304 VN-KWDLVARGPDTADQYREALYREYDFL 331
>gi|256827122|ref|YP_003151081.1| GTP-binding protein [Cryptobacterium curtum DSM 15641]
gi|256583265|gb|ACU94399.1| small GTP-binding protein domain/GTP-binding conserved hypothetical
protein [Cryptobacterium curtum DSM 15641]
Length = 444
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/208 (40%), Positives = 108/208 (51%), Gaps = 39/208 (18%)
Query: 158 VPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVD 217
+ +HL VA+VGRPNVGKS NR+V + AIV GVTRDR Y + W H F L+D
Sbjct: 1 MAKHL---VAVVGRPNVGKSTFVNRIVHSDEAIVHAMRGVTRDRSYHDADWNGHHFTLID 57
Query: 218 TGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVII 277
TG GI + +A + I QA A E VI+
Sbjct: 58 TG-------------------------GIEMGDEDA----FQTSIRNQAFTAARECDVIL 88
Query: 278 FLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPI 336
LVDG+ G+TA DEE+A LR+ +++ VNK ++ + EF+ LG P PI
Sbjct: 89 LLVDGRTGITADDEEVARILRREKAP--VLVVVNKLDNLDTA-DAMYEFYRLGLGDPWPI 145
Query: 337 SAISGTGTGELLDLVCSELKKV---EVC 361
SAI GTGTG+LLD V +EL KV E C
Sbjct: 146 SAIHGTGTGDLLDAVVAELDKVTPNETC 173
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 89/194 (45%), Gaps = 37/194 (19%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAI+GRPN GKS+L N L +R+IV D G TRD + + LVDT G+ S
Sbjct: 184 VAIIGRPNAGKSSLTNMLSRNDRSIVSDVAGTTRDAIDTLVAHEGRAYRLVDTAGLRRKS 243
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
K I ED+ + ++ AI+ + V++ +VDG G
Sbjct: 244 K----IDEDVEYYGFV-----------------------RSMRAIDRADVVLLMVDGTLG 276
Query: 286 LTAADEEIADWLRKNYMDKFIIL-------AVNKCESPRKGIMQVSEFWSLGFSP-LPIS 337
LT D+ IA + + I+L ++ E+ R I + F +GF+P + +S
Sbjct: 277 LTDQDQRIAGFAHERGCAMVIVLNKWDIVEGADRKEAVRDQITESLRF--VGFAPVVAVS 334
Query: 338 AISGTGTGELLDLV 351
A++G T + + +
Sbjct: 335 ALTGKNTHRIWEAI 348
>gi|429736003|ref|ZP_19269923.1| ribosome biogenesis GTPase Der [Selenomonas sp. oral taxon 138 str.
F0429]
gi|429156561|gb|EKX99190.1| ribosome biogenesis GTPase Der [Selenomonas sp. oral taxon 138 str.
F0429]
Length = 441
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 109/191 (57%), Gaps = 33/191 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN++ +IV D PGVTRDR+Y + W HEF ++DTGG
Sbjct: 4 PIVAVVGRPNVGKSTLFNQIGKKRVSIVDDMPGVTRDRIYMDAEWLNHEFTIIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I + + M S QA A+EE+ VI+ LVDG+
Sbjct: 61 ----------------------IEFDESDHILRSMRS----QAELAMEEADVILLLVDGR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
AGLT++DEE+A LR+ K +ILAVNK +S + + + +F++LG P+PISA +
Sbjct: 95 AGLTSSDEEVARLLRRT--KKPVILAVNKIDSFDRESL-IYDFYALGLGDPIPISASNAM 151
Query: 343 GTGELLDLVCS 353
G+LLD + +
Sbjct: 152 NLGDLLDAIVA 162
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 73/149 (48%), Gaps = 29/149 (19%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+A+VGRPNVGKS+L NRL+G R IV D PG TRD + +++L+DT G+
Sbjct: 179 IAVVGRPNVGKSSLVNRLLGEERVIVSDVPGTTRDAIDTHFTRDGVKYLLIDTAGMRRKG 238
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
K I L +V R + AI+ + V++ +++ G
Sbjct: 239 K-------------------ITLPVERYSVMR--------SLRAIDRAGVVLMVINAAEG 271
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCE 314
+ D +IA ++ ++ K +I+ VNK +
Sbjct: 272 ILEQDTKIAGYVHES--GKGVIIVVNKWD 298
>gi|376261789|ref|YP_005148509.1| ribosome-associated GTPase EngA [Clostridium sp. BNL1100]
gi|373945783|gb|AEY66704.1| ribosome-associated GTPase EngA [Clostridium sp. BNL1100]
Length = 441
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 103/189 (54%), Gaps = 32/189 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS FN L G +IV D PGVTRDR+Y W +F L+DTGG+
Sbjct: 4 PVVAVVGRPNVGKSTFFNYLAGSRISIVEDTPGVTRDRIYTEIEWRNTKFTLIDTGGIEP 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
S ED+ + ++RQA AIE + VIIF+VD +
Sbjct: 64 YS-------EDIIM----------------------QQMKRQAEIAIETADVIIFMVDAK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLP-ISAISGT 342
G+TA D+E+A LRK+ K ++L VNK + V EF++LG + IS++ G
Sbjct: 95 DGMTATDKEVATMLRKS--QKPVVLCVNKVDRVGDPPPDVYEFYNLGMGDMQIISSVHGL 152
Query: 343 GTGELLDLV 351
G G+LLD V
Sbjct: 153 GMGDLLDAV 161
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 92/196 (46%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VA+VG+PN GKS+L N ++G NR IV + PG TRD + ++ +DT G+
Sbjct: 179 KVAVVGKPNAGKSSLINSILGENRVIVSNIPGTTRDAIDTHVEKDGQKYTFIDTAGIRKR 238
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK I E + +TI ++ AIE + V + ++D +
Sbjct: 239 SK----INETIEKYSTI-----------------------RSWTAIERADVCLIMIDAED 271
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFW-----SLGF---SP-LP 335
G+T D +IA + + K I+ +NK + K + E+ LGF +P L
Sbjct: 272 GVTEQDTKIAGYAHQQ--GKASIIVINKWDLIEKQTGTLEEYRKVVHEKLGFMTYAPVLF 329
Query: 336 ISAISGTGTGELLDLV 351
ISA +G ++ +L+
Sbjct: 330 ISAKTGQRVNKIYELI 345
>gi|372489746|ref|YP_005029311.1| ribosome-associated GTPase EngA [Dechlorosoma suillum PS]
gi|359356299|gb|AEV27470.1| ribosome-associated GTPase EngA [Dechlorosoma suillum PS]
Length = 461
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 107/193 (55%), Gaps = 33/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P + +VGRPNVGKS LFNRL AIV D PG+TRDR YG G +++VDTGG
Sbjct: 3 PTLVLVGRPNVGKSTLFNRLTKTRDAIVADLPGLTRDRHYGHGKVGSKPYLVVDTGGFEP 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
++K I ++A RQ AI E+ ++F+VDG+
Sbjct: 63 LAKD--GIFHEMA---------------------------RQTEQAIAEADAVVFVVDGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+TA D+EIA+ LRK +++ +++AVNK E + ++ ++F+ LG P P+SA G
Sbjct: 94 VGITAQDKEIANKLRK--LERPVLVAVNKAEGMKHTVV-AADFYELGLGEPFPVSATHGD 150
Query: 343 GTGELLDLVCSEL 355
G +L+++ ++
Sbjct: 151 GVRDLVEMALADF 163
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 89/192 (46%), Gaps = 36/192 (18%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
PRVAIVGRPNVGKS L N L+G R I D PG TRD ++ ++ L+DT G+
Sbjct: 176 PRVAIVGRPNVGKSTLINALMGEERVIAFDMPGTTRDAIFVDFERNGRKYTLIDTAGLRR 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K + E ++ T+ +IE++ V++ ++D
Sbjct: 236 RGKVFEAV-EKFSVVKTL--------------------------QSIEDANVVVLVLDAD 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCES---PRKGIMQVSEFWSLGFSPLP----I 336
++ D IA ++ ++ + +++AVNK +S R+ ++V L F I
Sbjct: 269 QDISDQDAHIAGFVVES--GRSLVVAVNKWDSLDAYRRERIKVDLEHKLKFLSFATFHYI 326
Query: 337 SAISGTGTGELL 348
SA+ G G +L
Sbjct: 327 SALKGLGLEKLF 338
>gi|384082122|ref|ZP_09993297.1| GTP-binding protein Der [gamma proteobacterium HIMB30]
Length = 470
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/198 (38%), Positives = 106/198 (53%), Gaps = 34/198 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +A+VGRPNVGKS LFNRL A+V D G+TRDR YGR+ H F+L+DTGG+
Sbjct: 4 PVIALVGRPNVGKSTLFNRLTRSRDALVADYAGLTRDRQYGRAVLSGHPFLLIDTGGL-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
T G GI A E Q+ AAI+E+ ++F+VD
Sbjct: 62 ----------------TGGEAGIDAAMAE------------QSKAAIDEADAVVFMVDAA 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
+G+ A+D+ +AD LR+N DK + L NK + I +S+F+SLGF P I+A G
Sbjct: 94 SGIAASDQTVADMLRRN--DKPVWLVANKIDGQNADIA-LSDFYSLGFGEPQAIAASHGR 150
Query: 343 GTGELLDLVCSELKKVEV 360
G G L D + ++V
Sbjct: 151 GVGVLSDQLLDHFGLLDV 168
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 96/218 (44%), Gaps = 40/218 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R+ +VGRPNVGKS L NR++G +R +V D PG TRD +Y + + L+DT GV
Sbjct: 184 RIGVVGRPNVGKSTLVNRMLGEDRVVVFDLPGTTRDSIYIPYERYDETYTLIDTAGVRRR 243
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + E +I T+ AIE+S V+I +VD Q
Sbjct: 244 GRVNETV-EKFSIVKTL--------------------------QAIEDSHVVILVVDAQE 276
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI-MQVSEFWSLGFSPLP------IS 337
GL D + + + +++AVNK + + ++ E S +P IS
Sbjct: 277 GLVEQDLHLMGTVVD--AGRALVVAVNKWDHLDPDLRAKIRETLKRRLSFIPWAKVHYIS 334
Query: 338 AISGTGTGELLDLVCSELKKVEVCIGFLLICNAITKIF 375
A+ GTG G+L +K+ N +T+I
Sbjct: 335 ALHGTGVGDL----YGSIKEAYAAATTKFSTNVLTRIL 368
>gi|227872320|ref|ZP_03990675.1| GTPase [Oribacterium sinus F0268]
gi|227841827|gb|EEJ52102.1| GTPase [Oribacterium sinus F0268]
Length = 440
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 104/193 (53%), Gaps = 32/193 (16%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VA+VGRPNVGKS LFN + G +IV D PGVTRDR+Y W + F +VDTGG+ +S
Sbjct: 6 VAVVGRPNVGKSTLFNTIAGKQISIVQDTPGVTRDRIYAEGNWLNYYFTMVDTGGIEPIS 65
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+ + +M S QA AIE + VIIF+ D ++G
Sbjct: 66 D-------------------------DVLLKQMRS----QAELAIETADVIIFVTDVKSG 96
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+ AD E+A+ LR++ K I+L VNK +S +K + EF+ LG P P+SA + G
Sbjct: 97 VVDADYEVAEMLRRS--KKPIVLCVNKVDSIKKYGNDIYEFYQLGLGEPFPVSAANHLGL 154
Query: 345 GELLDLVCSELKK 357
G+LLD V K
Sbjct: 155 GDLLDEVVKHFPK 167
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++A++G+PNVGKS+L N+L+G NR IV D G TRD + + ++ +DT G+
Sbjct: 179 KIALIGKPNVGKSSLTNKLLGENRVIVSDIAGTTRDAIDTEVTYNGTPYIFIDTAGL--- 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + ED+ + I + AA++ + + I L+D
Sbjct: 236 -RRKGKVTEDIERYSVI-----------------------RTVAAVDRADICIVLIDAVE 271
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+T D IA ++ K +I+AVNK + K + EF
Sbjct: 272 GITDGDTRIAGIAHES--GKGVIIAVNKWDLVEKNDKTMQEF 311
>gi|88802177|ref|ZP_01117705.1| GTP-binding protein EngA [Polaribacter irgensii 23-P]
gi|88782835|gb|EAR14012.1| GTP-binding protein EngA [Polaribacter irgensii 23-P]
Length = 436
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 107/191 (56%), Gaps = 33/191 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRLV AIV GVTRDR YG+S W EF ++DTGG
Sbjct: 5 VAIVGRPNVGKSTLFNRLVQRRDAIVDSVSGVTRDRHYGKSDWNGKEFSVIDTGGY---- 60
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+IG + I I +Q T AIEE+ +I+F+VD + G
Sbjct: 61 --------------SIGSDDI-----------FEEEIRKQVTLAIEEADIIVFVVDVEEG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGTGT 344
+T D E+A LRK + K I + VNK ++ + V EF++LG IS+I+G+GT
Sbjct: 96 ITPMDAEVAKILRK--IKKPIFVTVNKVDNAMRDANAV-EFYNLGLGGYHTISSINGSGT 152
Query: 345 GELLDLVCSEL 355
G+LLD + +++
Sbjct: 153 GDLLDAIAAKM 163
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 82/180 (45%), Gaps = 35/180 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LPR A+VGRPN GKS+ N L+G +R IV + G TRD + + +F LVDT G+
Sbjct: 176 LPRFAVVGRPNAGKSSFINALIGKDRNIVTNIAGTTRDSIDTKYNRFGFDFNLVDTAGIR 235
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
SK + EDL + + +A +IE + VII +VD
Sbjct: 236 KKSK----VKEDLEFYSVM-----------------------RAVRSIEYADVIILVVDA 268
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSL------GFSPLPI 336
G D+ I KN K +I+ +NK + K + +F ++ F+ +PI
Sbjct: 269 TRGFEGQDQSIFWLAEKN--RKGVIILINKWDLVEKETNTMRDFEAMVRKQVAPFTDIPI 326
>gi|374366363|ref|ZP_09624444.1| GTP-binding protein Der [Cupriavidus basilensis OR16]
gi|373102147|gb|EHP43187.1| GTP-binding protein Der [Cupriavidus basilensis OR16]
Length = 447
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/189 (42%), Positives = 102/189 (53%), Gaps = 33/189 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+ P +A+VGRPNVGKS LFNR+ A+V D PG+TRDR YG GE F+ +DTGG
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRMTRSRDALVADLPGLTRDRHYGEGRIGERPFIAIDTGGF 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
V+K EGI VA M +Q A+ E+ V+IFLVD
Sbjct: 61 EPVAK-----------------EGI--------VAEMA----KQTRQAVVEADVVIFLVD 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ GL D IAD+LRK + ++LAVNK E K VSEF+ LG P IS+
Sbjct: 92 GRLGLAPQDRVIADYLRKT--GRRVMLAVNKAEG-MKYTNVVSEFYELGMGDPYAISSTH 148
Query: 341 GTGTGELLD 349
G G EL+D
Sbjct: 149 GDGVRELVD 157
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 71/151 (47%), Gaps = 29/151 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVGRPNVGKS L N L+G R I D PG TRD +Y G + L+DT G+
Sbjct: 182 KIAIVGRPNVGKSTLVNTLIGEERVIAFDMPGTTRDAIYVEFERGGKPYTLIDTAGLRKR 241
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K I E ++ T+ +I ++ V++ L+D Q
Sbjct: 242 GKVFEAI-EKFSVVKTL--------------------------QSIADANVVVLLLDAQQ 274
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCES 315
++ D IA ++ ++ + +++ VNK +
Sbjct: 275 DVSEQDAHIAGFIVES--GRALVVGVNKWDG 303
>gi|310287469|ref|YP_003938727.1| GTP-binding protein [Bifidobacterium bifidum S17]
gi|309251405|gb|ADO53153.1| GTP-binding protein [Bifidobacterium bifidum S17]
Length = 711
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 99/274 (36%), Positives = 128/274 (46%), Gaps = 47/274 (17%)
Query: 99 DESDGQDFGIDVDALEREAKDAV--REYSSLLSRQLIIQDETDDRKDSGKKQKKRKTTIG 156
D SD DF +D L DAV +EY + + +D D G +Q + G
Sbjct: 211 DNSD-MDFQQTLDVLITLVADAVEVQEYEQYAA------NLSDYELDEGDEQIIAGSRYG 263
Query: 157 NVPEHLLPR----VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHE 212
E P+ +A+VGRPNVGKS L NR++G A+V D PGVTRDR+ + W E
Sbjct: 264 IEDESPAPKAVGVLAVVGRPNVGKSTLVNRILGRRAAVVEDTPGVTRDRVSYDAEWSGTE 323
Query: 213 FMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEE 272
F LVDTGG EA V + S I QA A++
Sbjct: 324 FKLVDTGGW------------------------------EADVEGIESAIASQAQIAVQL 353
Query: 273 SCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS 332
S +I +VDG GLT DE I LR + K + LAVNK + + +EFW LG
Sbjct: 354 SDAVILVVDGHVGLTDTDERIVKMLRAS--GKPVTLAVNKVDDGASEYL-TAEFWKLGMG 410
Query: 333 -PLPISAISGTGTGELLDLVCSELKKVEVCIGFL 365
P ISA+ G G G+LLD L+K + GFL
Sbjct: 411 EPYGISAMHGRGVGDLLDAALDSLRKADKTSGFL 444
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 148 QKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSF 207
+K KT+ P HL RVA+VGRPNVGKS+L N+L G RA+V D G TRD +
Sbjct: 435 RKADKTSGFLTPTHL-RRVALVGRPNVGKSSLLNQLAGEQRAVVNDLAGTTRDPVDETID 493
Query: 208 WGEHEFMLVDTGGV 221
+++ +DT G+
Sbjct: 494 IDGEDWLFIDTAGI 507
>gi|421482982|ref|ZP_15930561.1| GTP-binding protein Der [Achromobacter piechaudii HLE]
gi|400198786|gb|EJO31743.1| GTP-binding protein Der [Achromobacter piechaudii HLE]
Length = 450
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 103/193 (53%), Gaps = 32/193 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFNRL A+V D G+TRDR YG GE F+ +DTGG
Sbjct: 5 PVVALVGRPNVGKSTLFNRLTRSRAALVADFSGLTRDRHYGEGRVGEIPFIAIDTGGFEP 64
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
V+K +GI L + RQ AI E+ V++FLVD +
Sbjct: 65 VAK-----------------DGILLE------------MARQTRQAIAEADVVVFLVDAR 95
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGT 342
AG+ A D EIA LRK+ + ++LAVNK E G +SEF LG P PISA G
Sbjct: 96 AGINAHDHEIAQLLRKSGQQR-VLLAVNKAEGMGLG-PAISEFHELGLGQPYPISAAHGD 153
Query: 343 GTGELLDLVCSEL 355
G +L++L +L
Sbjct: 154 GIVDLIELALKDL 166
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 84/196 (42%), Gaps = 36/196 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVGRPNVGKS L N L+G R I D PG TRD + + L+DT G+
Sbjct: 186 KLAIVGRPNVGKSTLINTLMGEERVIAFDLPGTTRDAIEIDFDRDGRRYTLIDTAGLRKR 245
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K + E ++ T+ AIE S V++ ++D
Sbjct: 246 GKVFEAV-EKFSVIKTL--------------------------QAIEASNVVLLMLDAHT 278
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKC------ESPRKGIMQVSEFWSLGFSPL-PIS 337
++ D IA ++ + + +++A+NK E R + L F+ + IS
Sbjct: 279 EISEQDAHIAGFVLET--GRAVVVAINKWDGLDGEEKERIEREFQRKLRFLSFARMHTIS 336
Query: 338 AISGTGTGELLDLVCS 353
A+ G G LL + S
Sbjct: 337 ALRGQGIKPLLKSINS 352
>gi|313140250|ref|ZP_07802443.1| bifunctional cytidylate kinase/GTP-binding protein [Bifidobacterium
bifidum NCIMB 41171]
gi|313132760|gb|EFR50377.1| bifunctional cytidylate kinase/GTP-binding protein [Bifidobacterium
bifidum NCIMB 41171]
Length = 711
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 99/274 (36%), Positives = 128/274 (46%), Gaps = 47/274 (17%)
Query: 99 DESDGQDFGIDVDALEREAKDAV--REYSSLLSRQLIIQDETDDRKDSGKKQKKRKTTIG 156
D SD DF +D L DAV +EY + + +D D G +Q + G
Sbjct: 211 DNSD-MDFQQTLDVLITLVADAVEVQEYEQYAA------NLSDYELDEGDEQIIAGSRYG 263
Query: 157 NVPEHLLPR----VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHE 212
E P+ +A+VGRPNVGKS L NR++G A+V D PGVTRDR+ + W E
Sbjct: 264 IEDESPAPKAVGVLAVVGRPNVGKSTLVNRILGRRAAVVEDTPGVTRDRVSYDAEWSGTE 323
Query: 213 FMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEE 272
F LVDTGG EA V + S I QA A++
Sbjct: 324 FKLVDTGGW------------------------------EADVEGIESAIASQAQIAVQL 353
Query: 273 SCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS 332
S +I +VDG GLT DE I LR + K + LAVNK + + +EFW LG
Sbjct: 354 SDAVILVVDGHVGLTDTDERIVKMLRAS--GKPVTLAVNKVDDGASEYL-TAEFWKLGMG 410
Query: 333 -PLPISAISGTGTGELLDLVCSELKKVEVCIGFL 365
P ISA+ G G G+LLD L+K + GFL
Sbjct: 411 EPYGISAMHGRGVGDLLDAALDSLRKADKTSGFL 444
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 148 QKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSF 207
+K KT+ P HL RVA+VGRPNVGKS+L N+L G RA+V D G TRD +
Sbjct: 435 RKADKTSGFLTPTHL-RRVALVGRPNVGKSSLLNQLAGEQRAVVNDLAGTTRDPVDETID 493
Query: 208 WGEHEFMLVDTGGV 221
+++ +DT G+
Sbjct: 494 IDGEDWLFIDTAGI 507
>gi|411009711|ref|ZP_11386040.1| GTP-binding protein EngA [Aeromonas aquariorum AAK1]
gi|423196246|ref|ZP_17182829.1| GTPase Der [Aeromonas hydrophila SSU]
gi|404633047|gb|EKB29649.1| GTPase Der [Aeromonas hydrophila SSU]
Length = 499
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 105/193 (54%), Gaps = 34/193 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+ P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YG++ GE EF++VDTGG+
Sbjct: 1 MTPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGELEFIVVDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
EGI L E Q+ AIEE+ V++F+VD
Sbjct: 61 DGTE------------------EGIELKMAE------------QSLLAIEEADVVLFMVD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAIS 340
+AGLTAAD+ IA+ LRK + K + L NK + G VSEF+ L + ++A
Sbjct: 91 ARAGLTAADQAIAEHLRKTH--KKVFLVANKTDGI-DGDSAVSEFYGLALGEVYQMAAAH 147
Query: 341 GTGTGELLDLVCS 353
G G LL+L +
Sbjct: 148 GRGVLSLLELALA 160
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 40/210 (19%)
Query: 147 KQKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRS 206
K+ ++T ++P + AIVGRPNVGKS L NR++G +R IV D PG TRD +Y
Sbjct: 200 KEDTKETPFADLP----IKFAIVGRPNVGKSTLTNRMLGEDRVIVYDMPGTTRDSVYIPM 255
Query: 207 FWGEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQA 266
E +++++DT GV K + E ++ T+
Sbjct: 256 ERDEQKYVIIDTAGVRRRGKVHETV-EKFSVIKTL------------------------- 289
Query: 267 TAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQ--VS 324
AIE++ V + ++D Q +T D I ++ + ++L VNK + + + + +
Sbjct: 290 -KAIEDANVCLLVIDAQETITDQDLSILGFVLNT--GRSVVLVVNKWDGLDQKVKEDVKN 346
Query: 325 EF-WSLGFSPLP----ISAISGTGTGELLD 349
E LGF ISA+ G+G G L +
Sbjct: 347 ELDRRLGFIDFARVHFISALHGSGVGHLFE 376
>gi|420145959|ref|ZP_14653403.1| GTPase Der (GTP-binding protein EngA) [Lactobacillus coryniformis
subsp. coryniformis CECT 5711]
gi|398402348|gb|EJN55699.1| GTPase Der (GTP-binding protein EngA) [Lactobacillus coryniformis
subsp. coryniformis CECT 5711]
Length = 436
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/194 (39%), Positives = 109/194 (56%), Gaps = 36/194 (18%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y + W HEF L+DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTVFNRIAGQRVSIVDDAPGVTRDRIYTSAEWLGHEFNLIDTGGIDI 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
V QP + + I+ QA AIEE+ VI+F+ +
Sbjct: 64 V--DQPFVEQ----------------------------IKEQAEIAIEEADVIVFVTSVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQ-VSEFWSLGF-SPLPISAISG 341
G+T ADE +A L + DK ++LAVNK ++ + + Q + ++++LGF P+ IS + G
Sbjct: 94 EGITDADENVARILYCS--DKPVVLAVNKVDN--QDLRQDIYDYYALGFDEPIGISGVHG 149
Query: 342 TGTGELLDLVCSEL 355
G G+LLD +
Sbjct: 150 IGVGDLLDAIIKHF 163
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 82/163 (50%), Gaps = 30/163 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGR-SFWGEHEFMLVDTGGVLN 223
R +++GRPNVGKS+L N ++G NR IV D G TRD + R + EF ++DT G+
Sbjct: 176 RFSLIGRPNVGKSSLVNAILGENRVIVSDIAGTTRDAIDTRFAAANGTEFNMIDTAGLRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K+ N A S++ +A +AI+ S V++ +++ +
Sbjct: 236 RGKAYEN-------------------------AEKYSVL--RAMSAIDRSDVVLVVLNAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D++IA + + + II+ VNK ++ +K +S F
Sbjct: 269 EGIREQDKKIAGYAHE--AGRGIIIVVNKWDTLKKDNHSLSNF 309
>gi|311064384|ref|YP_003971109.1| GTP-binding protein [Bifidobacterium bifidum PRL2010]
gi|310866703|gb|ADP36072.1| GTP-binding protein [Bifidobacterium bifidum PRL2010]
Length = 711
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 80/201 (39%), Positives = 101/201 (50%), Gaps = 34/201 (16%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+A+VGRPNVGKS L NR++G A+V D PGVTRDR+ + W EF LVDTGG
Sbjct: 277 LAVVGRPNVGKSTLVNRILGRRAAVVEDTPGVTRDRVSYDAEWSGTEFKLVDTGGW---- 332
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
EA V + S I QA A++ S +I +VDG G
Sbjct: 333 --------------------------EADVEGIESAIASQAQIAVQLSDAVILVVDGHVG 366
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
LT DE I LR + K + LAVNK + + +EFW LG P ISA+ G G
Sbjct: 367 LTDTDERIVKMLRAS--GKPVTLAVNKVDDGASEYL-TAEFWKLGMGEPYGISAMHGRGV 423
Query: 345 GELLDLVCSELKKVEVCIGFL 365
G+LLD L+K + GFL
Sbjct: 424 GDLLDAALDSLRKADKTSGFL 444
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 148 QKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSF 207
+K KT+ P HL RVA+VGRPNVGKS+L N+L G RA+V D G TRD +
Sbjct: 435 RKADKTSGFLTPTHL-RRVALVGRPNVGKSSLLNQLAGEQRAVVNDLAGTTRDPVDETID 493
Query: 208 WGEHEFMLVDTGGV 221
+++ +DT G+
Sbjct: 494 IDGEDWLFIDTAGI 507
>gi|421734618|ref|ZP_16173682.1| bifunctional cytidylate kinase/GTPase Der [Bifidobacterium bifidum
LMG 13195]
gi|407077422|gb|EKE50264.1| bifunctional cytidylate kinase/GTPase Der [Bifidobacterium bifidum
LMG 13195]
Length = 711
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 99/274 (36%), Positives = 128/274 (46%), Gaps = 47/274 (17%)
Query: 99 DESDGQDFGIDVDALEREAKDAV--REYSSLLSRQLIIQDETDDRKDSGKKQKKRKTTIG 156
D SD DF +D L DAV +EY + + +D D G +Q + G
Sbjct: 211 DNSD-MDFQQTLDVLITLVADAVEVQEYEQYAA------NLSDYELDEGDEQIIAGSRYG 263
Query: 157 NVPEHLLPR----VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHE 212
E P+ +A+VGRPNVGKS L NR++G A+V D PGVTRDR+ + W E
Sbjct: 264 IEDESPAPKAVGVLAVVGRPNVGKSTLVNRILGRRAAVVEDTPGVTRDRVSYDAEWSGTE 323
Query: 213 FMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEE 272
F LVDTGG EA V + S I QA A++
Sbjct: 324 FKLVDTGGW------------------------------EADVEGIESAIASQAQIAVQL 353
Query: 273 SCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS 332
S +I +VDG GLT DE I LR + K + LAVNK + + +EFW LG
Sbjct: 354 SDAVILVVDGHVGLTDTDERIVKMLRAS--GKPVTLAVNKVDDGASEYL-TAEFWKLGMG 410
Query: 333 -PLPISAISGTGTGELLDLVCSELKKVEVCIGFL 365
P ISA+ G G G+LLD L+K + GFL
Sbjct: 411 EPYGISAMHGRGVGDLLDAALDSLRKADKTSGFL 444
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 148 QKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSF 207
+K KT+ P HL RVA+VGRPNVGKS+L N+L G RA+V D G TRD +
Sbjct: 435 RKADKTSGFLTPTHL-RRVALVGRPNVGKSSLLNQLAGEQRAVVNDLAGTTRDPVDETID 493
Query: 208 WGEHEFMLVDTGGV 221
+++ +DT G+
Sbjct: 494 IDGEDWLFIDTAGI 507
>gi|390936840|ref|YP_006394399.1| GTP-binding protein [Bifidobacterium bifidum BGN4]
gi|389890453|gb|AFL04520.1| GTP-binding protein [Bifidobacterium bifidum BGN4]
Length = 677
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 80/201 (39%), Positives = 101/201 (50%), Gaps = 34/201 (16%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+A+VGRPNVGKS L NR++G A+V D PGVTRDR+ + W EF LVDTGG
Sbjct: 243 LAVVGRPNVGKSTLVNRILGRRAAVVEDTPGVTRDRVSYDAEWSGTEFKLVDTGGW---- 298
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
EA V + S I QA A++ S +I +VDG G
Sbjct: 299 --------------------------EADVEGIESAIASQAQIAVQLSDAVILVVDGHVG 332
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
LT DE I LR + K + LAVNK + + +EFW LG P ISA+ G G
Sbjct: 333 LTDTDERIVKMLRAS--GKPVTLAVNKVDDGASEYL-TAEFWKLGMGEPYGISAMHGRGV 389
Query: 345 GELLDLVCSELKKVEVCIGFL 365
G+LLD L+K + GFL
Sbjct: 390 GDLLDAALDSLRKADKTSGFL 410
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 148 QKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSF 207
+K KT+ P HL RVA+VGRPNVGKS+L N+L G RA+V D G TRD +
Sbjct: 401 RKADKTSGFLTPTHL-RRVALVGRPNVGKSSLLNQLAGEQRAVVNDLAGTTRDPVDETID 459
Query: 208 WGEHEFMLVDTGGV 221
+++ +DT G+
Sbjct: 460 IDGEDWLFIDTAGI 473
>gi|134094495|ref|YP_001099570.1| GTP-binding protein EngA [Herminiimonas arsenicoxydans]
gi|166198721|sp|A4G4K6.1|DER_HERAR RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|133738398|emb|CAL61443.1| GTP-binding protein EngA [Herminiimonas arsenicoxydans]
Length = 447
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 102/187 (54%), Gaps = 33/187 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +A+VGRPNVGKS LFNRL A+V D PG+TRDR YG GE F+++DTGG
Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRMGERPFLVIDTGGFEP 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
V+K IM ++A +Q A+ E+ V+IF+VDG+
Sbjct: 63 VAKE--GIMHEMA---------------------------KQTKQAVAEADVVIFIVDGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT D+ I D+LRK+ + ++L VNK E K M ++F+ LG P ISA G
Sbjct: 94 QGLTPHDKTITDFLRKS--GRSVMLVVNKAEG-MKYTMVTADFYELGLGDPYVISAAHGD 150
Query: 343 GTGELLD 349
G +L++
Sbjct: 151 GVSDLVE 157
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 91/195 (46%), Gaps = 38/195 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHE-FMLVDTGGVLN 223
R+AIVGRPNVGKS L N L+G R I D PG TRD + F E + + L+DT G+
Sbjct: 182 RLAIVGRPNVGKSTLVNTLLGEERVIAFDLPGTTRDSIE-IPFEREGKLYTLIDTAGIRR 240
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K I E ++ T+ +I E+ V++ L+D Q
Sbjct: 241 RGKVFEAI-EKFSVVKTL--------------------------QSISEANVVLLLLDAQ 273
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCE---SPRKGIMQVSEFWSLGFSPLP----I 336
++ D IA ++ ++ + +++ VNK + S R+ +++ LGF +
Sbjct: 274 QDISEQDAHIAGFILES--GRALVVGVNKWDGLTSDRRDEIKIDLERKLGFLSFAKTHFV 331
Query: 337 SAISGTGTGELLDLV 351
SA+ +G G ++ V
Sbjct: 332 SALKSSGIGPMMKSV 346
>gi|421737968|ref|ZP_16176387.1| bifunctional cytidylate kinase/GTPase Der, partial [Bifidobacterium
bifidum IPLA 20015]
gi|407294743|gb|EKF14706.1| bifunctional cytidylate kinase/GTPase Der, partial [Bifidobacterium
bifidum IPLA 20015]
Length = 534
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 80/201 (39%), Positives = 101/201 (50%), Gaps = 34/201 (16%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+A+VGRPNVGKS L NR++G A+V D PGVTRDR+ + W EF LVDTGG
Sbjct: 100 LAVVGRPNVGKSTLVNRILGRRAAVVEDTPGVTRDRVSYDAEWSGTEFKLVDTGGW---- 155
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
EA V + S I QA A++ S +I +VDG G
Sbjct: 156 --------------------------EADVEGIESAIASQAQIAVQLSDAVILVVDGHVG 189
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
LT DE I LR + K + LAVNK + + +EFW LG P ISA+ G G
Sbjct: 190 LTDTDERIVKMLRAS--GKPVTLAVNKVDDGASEYL-TAEFWKLGMGEPYGISAMHGRGV 246
Query: 345 GELLDLVCSELKKVEVCIGFL 365
G+LLD L+K + GFL
Sbjct: 247 GDLLDAALDSLRKADKTSGFL 267
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 148 QKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSF 207
+K KT+ P HL RVA+VGRPNVGKS+L N+L G RA+V D G TRD +
Sbjct: 258 RKADKTSGFLTPTHL-RRVALVGRPNVGKSSLLNQLAGEQRAVVNDLAGTTRDPVDETID 316
Query: 208 WGEHEFMLVDTGGV 221
+++ +DT G+
Sbjct: 317 IDGEDWLFIDTAGI 330
>gi|441501604|ref|ZP_20983694.1| GTP-binding protein EngA [Fulvivirga imtechensis AK7]
gi|441434627|gb|ELR68081.1| GTP-binding protein EngA [Fulvivirga imtechensis AK7]
Length = 434
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 102/191 (53%), Gaps = 33/191 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRL+ +AI+ DE GVTRDR YG + W F ++DTGG + S
Sbjct: 5 VAIVGRPNVGKSTLFNRLIEKRKAIMDDESGVTRDRHYGYAEWTGKHFTVIDTGGYVTGS 64
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
ED + + I Q AI+E+ VI+F+VD G
Sbjct: 65 -------ED----------------------KFETEIRHQVELAIDEASVILFMVDSHMG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGTGT 344
LT D++ A LR + K I L NK ++ M SEF++LG + P+S+ SG+GT
Sbjct: 96 LTDLDKDFARVLRTS--KKPIYLVANKADTTEYMHM-ASEFYALGMGEIYPVSSASGSGT 152
Query: 345 GELLDLVCSEL 355
G+LLD V
Sbjct: 153 GDLLDRVVEHF 163
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 95/197 (48%), Gaps = 53/197 (26%)
Query: 159 PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRD------RMYGRSFWGEHE 212
PE +PR+AI+GRPNVGKS+ N L+G R+IV DE G TRD ++YG+ +
Sbjct: 170 PESGIPRIAILGRPNVGKSSFLNALLGKERSIVTDEAGTTRDAINTHYKLYGK------D 223
Query: 213 FMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEE 272
F+L DT G+ SK + ED+ + + ++ A+++
Sbjct: 224 FILTDTAGIRKKSK----VKEDIEFYSVL-----------------------RSIQALQD 256
Query: 273 SCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNK----------CESPRKGIMQ 322
S V IF++D + GL A D I + K K I++ VNK E RK I+Q
Sbjct: 257 SDVCIFIIDAERGLEAQDMSIINLALK--YRKGIMIMVNKWDLIEKENNTAEQYRKAIVQ 314
Query: 323 VSEFWSLGFSPLPISAI 339
+ L + P+ +++
Sbjct: 315 --KLGQLDYIPIIFTSV 329
>gi|358063993|ref|ZP_09150588.1| GTP-binding protein engA [Clostridium hathewayi WAL-18680]
gi|356697779|gb|EHI59344.1| GTP-binding protein engA [Clostridium hathewayi WAL-18680]
Length = 442
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 111/199 (55%), Gaps = 34/199 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN + G +IV D PGVTRDR+Y W + F L+DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNVIAGDTISIVKDTPGVTRDRIYADCTWLDMNFTLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P+ D+ + S + QA AI + VIIF+VD +
Sbjct: 62 ----EPD-TNDIIL----------------------SQMREQAEIAIATADVIIFIVDVR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL AD +AD LRK+ K ++LAVNK +S +K + EF++LG P+ +SA S
Sbjct: 95 QGLVDADFRVADMLRKS--KKPMVLAVNKVDSFQKFGNDIYEFYNLGLGDPIAVSAASRL 152
Query: 343 GTGELLDLVCS--ELKKVE 359
G G+LLD V ++++VE
Sbjct: 153 GIGDLLDEVAKHFDMEQVE 171
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 99/213 (46%), Gaps = 40/213 (18%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
PR+A+VG+PNVGKS++ N+L+G NR IV + G TRD + E++ +DT G+
Sbjct: 178 PRIAVVGKPNVGKSSIINKLIGENRVIVSNIAGTTRDAVDTEVVHNGTEYVFIDTAGL-- 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ + I E+L + I + A+E + V++ ++D
Sbjct: 236 --RRKNKIKEELERYSII-----------------------RTVTAVERADVVVVVIDAS 270
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFW-----SLGFSPLP--- 335
G+T D +IA + K +I+AVNK ++ K + EF +L F
Sbjct: 271 EGVTEQDAKIAGIAHER--GKGVIIAVNKWDAIEKNDKTIYEFTRKVRDTLSFMQYAEII 328
Query: 336 -ISAISGTGTGELLDLV--CSELKKVEVCIGFL 365
ISA++G +L + + E + + V G L
Sbjct: 329 FISALTGQRLNKLFETIDMVRENQTLRVQTGVL 361
>gi|334705272|ref|ZP_08521138.1| GTP-binding protein EngA [Aeromonas caviae Ae398]
Length = 498
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 105/193 (54%), Gaps = 34/193 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+ P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YG++ GE EF++VDTGG+
Sbjct: 1 MTPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGELEFIVVDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
EGI L E Q+ AIEE+ V++F+VD
Sbjct: 61 DGTE------------------EGIELKMAE------------QSLLAIEEADVVLFMVD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAIS 340
+AGLTAAD+ IA+ LRK + K + L NK + G VSEF+ L + ++A
Sbjct: 91 ARAGLTAADQAIAEHLRKTH--KKVFLVANKTDGI-DGDSAVSEFYGLALGEVYQMAAAH 147
Query: 341 GTGTGELLDLVCS 353
G G LL+L +
Sbjct: 148 GRGVLSLLELALA 160
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 106/226 (46%), Gaps = 46/226 (20%)
Query: 131 QLIIQDETDDRKDSGKKQKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAI 190
+++ E D R+D+ ++T ++P + AIVGRPNVGKS L NR++G +R I
Sbjct: 189 RMVAAGELDTREDT------KETPFADLP----IKFAIVGRPNVGKSTLTNRMLGEDRVI 238
Query: 191 VVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLAT 250
V D PG TRD +Y + +++++DT GV K + E ++ T+
Sbjct: 239 VYDMPGTTRDSVYIPMERDDQKYVVIDTAGVRRRGKVHETV-EKFSVIKTL--------- 288
Query: 251 REAAVARMPSMIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAV 310
AIE++ V + ++D + +T D I ++ + + ++L V
Sbjct: 289 -----------------KAIEDANVCLLVIDARETITDQDLSILGFVLNS--GRSVVLVV 329
Query: 311 NKCESPRKGIMQ--VSEF-WSLGFSPLP----ISAISGTGTGELLD 349
NK + + + + +E LGF ISA+ G+G G L +
Sbjct: 330 NKWDGLDQKVKEDVKNELDRRLGFIDFARVHFISALHGSGVGHLFE 375
>gi|395763286|ref|ZP_10443955.1| GTP-binding protein Der [Janthinobacterium lividum PAMC 25724]
Length = 448
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 104/190 (54%), Gaps = 33/190 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +A+VGRPNVGKS LFNRL A+V D PG+TRDR YG GE F+++DTGG
Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPFLVIDTGGFEP 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
V+K IM +A+ Q A+ E+ V++F+VDG+
Sbjct: 63 VAKE--GIMHQMAL---------------------------QTKQAVAEADVVVFIVDGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT D+ I D+LRK+ + ++L VNK E R + VSEF+ LG P IS+ G
Sbjct: 94 QGLTPHDKTIVDFLRKS--GRPVLLVVNKSEGMRYTAV-VSEFYELGMGDPYAISSAHGD 150
Query: 343 GTGELLDLVC 352
G +L++++
Sbjct: 151 GVNDLVEVML 160
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 29/151 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++A+VGRPNVGKS L N L+G R I D PG TRD + ++ L+DT G+
Sbjct: 182 KIALVGRPNVGKSTLINTLLGEERVIAFDMPGTTRDSIEIPFERDGQQYTLIDTAGIRRR 241
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K I E ++ T+ +I E+ V++ ++D Q
Sbjct: 242 GKVFEAI-EKFSVVKTL--------------------------QSISEANVVVLMLDAQQ 274
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCES 315
++ D IA ++ ++ + +++AVNK +
Sbjct: 275 DISEQDAHIAGFILES--GRALVVAVNKWDG 303
>gi|220929546|ref|YP_002506455.1| GTP-binding protein EngA [Clostridium cellulolyticum H10]
gi|254783147|sp|B8I442.1|DER_CLOCE RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|219999874|gb|ACL76475.1| small GTP-binding protein [Clostridium cellulolyticum H10]
Length = 441
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 103/189 (54%), Gaps = 32/189 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS FN L G +IV D PGVTRDR+Y W +F L+DTGG+
Sbjct: 4 PVVAVVGRPNVGKSTFFNYLAGSRISIVEDTPGVTRDRIYTEIEWRNTKFTLIDTGGIEP 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
S ED+ + ++RQA AIE + VIIF+VD +
Sbjct: 64 YS-------EDIIM----------------------QQMKRQAEIAIETADVIIFMVDAK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLP-ISAISGT 342
G+TA D+E+A LRK+ K ++L VNK + V EF++LG + IS++ G
Sbjct: 95 DGMTATDKEVATMLRKS--QKPVVLCVNKVDRVGDPPPDVYEFYNLGMGEMQIISSVHGL 152
Query: 343 GTGELLDLV 351
G G+LLD V
Sbjct: 153 GIGDLLDEV 161
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 93/196 (47%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VA+VG+PN GKS+L N ++G NR IV + PG TRD + ++ +DT G+
Sbjct: 179 KVAVVGKPNAGKSSLINSILGENRVIVSNIPGTTRDAIDTHVEKDGQKYTFIDTAGIRRR 238
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK I E++ +TI ++ A+E + V + ++D +
Sbjct: 239 SK----ISENIEKYSTI-----------------------RSWTAVERADVCLIMIDAED 271
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFW-----SLGF---SP-LP 335
G+T D +IA + + K I+ +NK + K + E+ LGF +P L
Sbjct: 272 GVTEQDTKIAGYAHQQ--GKASIIVINKWDLIEKQTGTLEEYRKVVHEKLGFMTYAPVLF 329
Query: 336 ISAISGTGTGELLDLV 351
ISA +G ++ +L+
Sbjct: 330 ISAKTGQRVIKIYELI 345
>gi|163786085|ref|ZP_02180533.1| GTP-binding protein EngA [Flavobacteriales bacterium ALC-1]
gi|159877945|gb|EDP72001.1| GTP-binding protein EngA [Flavobacteriales bacterium ALC-1]
Length = 434
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 107/191 (56%), Gaps = 33/191 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VA+VGRPNVGKS FNRL+ AIV GVTRDR YG++ W EF L+DTGG +
Sbjct: 5 VAVVGRPNVGKSTFFNRLIKRREAIVDAVSGVTRDRHYGKTDWNGKEFSLIDTGGYV--- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+G + I + I++Q AI+E+ IIF+VD + G
Sbjct: 62 ---------------VGSDDI-----------FEAEIDKQVELAIDEADAIIFMVDVETG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP-LPISAISGTGT 344
+T DE++A+ LRK + K + L VNK ++ ++ V EF+SLG I++I+G+GT
Sbjct: 96 ITGMDEDVANLLRK--VKKPVFLVVNKVDNNKRAEDAV-EFYSLGLGDYFTIASINGSGT 152
Query: 345 GELLDLVCSEL 355
G+LLD V L
Sbjct: 153 GDLLDAVVDAL 163
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 68/167 (40%), Gaps = 43/167 (25%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LPR A+VGRPN GKS+ N L+G R IV D G TRD + + EF LVDT G+
Sbjct: 174 LPRFAVVGRPNAGKSSFINALIGEERYIVTDIAGTTRDSIDTKYNRFGFEFNLVDTAGIR 233
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
SK + EDL + + ++ AIE V + ++D
Sbjct: 234 RKSK----VKEDLEFYSVM-----------------------RSVRAIEHCDVCLLVLDA 266
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSL 329
G + I WL E RKGI+ + W L
Sbjct: 267 TRGFDGQVQNIF-WL---------------AERNRKGIVILVNKWDL 297
>gi|145299527|ref|YP_001142368.1| GTP-binding protein EngA [Aeromonas salmonicida subsp. salmonicida
A449]
gi|418357106|ref|ZP_12959810.1| GTP-binding protein EngA [Aeromonas salmonicida subsp. salmonicida
01-B526]
gi|166224302|sp|A4SNZ8.1|DER_AERS4 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|142852299|gb|ABO90620.1| GTP-binding protein EngA [Aeromonas salmonicida subsp. salmonicida
A449]
gi|356689902|gb|EHI54436.1| GTP-binding protein EngA [Aeromonas salmonicida subsp. salmonicida
01-B526]
Length = 499
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 104/193 (53%), Gaps = 34/193 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+ P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YG++ GE EF++VDTGG+
Sbjct: 1 MTPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGELEFIVVDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
EGI L E Q+ AIEE+ V++F+VD
Sbjct: 61 DGTE------------------EGIELKMAE------------QSLLAIEEADVVLFMVD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAIS 340
+AGLTAAD+ IA LRK + K + L NK + G VSEF+ L + I+A
Sbjct: 91 ARAGLTAADQAIAAHLRKTH--KKVFLVANKTDGI-DGDSAVSEFYCLALGDVYQIAAAH 147
Query: 341 GTGTGELLDLVCS 353
G G LL+L +
Sbjct: 148 GRGVLSLLELALA 160
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 91/192 (47%), Gaps = 36/192 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+ AIVGRPNVGKS L NR++G +R IV D PG TRD +Y E +++++DT GV
Sbjct: 214 KFAIVGRPNVGKSTLTNRMLGEDRVIVYDMPGTTRDSVYVPMERDEQKYVVIDTAGVRRR 273
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K + E ++ T+ AIE++ V + ++D Q
Sbjct: 274 GKVHETV-EKFSVIKTL--------------------------KAIEDANVCLLVIDAQE 306
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQ--VSEF-WSLGFSPLP----IS 337
+T D I ++ + + ++L VNK + + + + +E LGF IS
Sbjct: 307 TITDQDLSILGFVL--HSGRSVVLVVNKWDGLDQKVKEDVKNELDRRLGFIDFARVHFIS 364
Query: 338 AISGTGTGELLD 349
A+ G+G G L +
Sbjct: 365 ALHGSGVGHLFE 376
>gi|344205138|ref|YP_004790280.1| GTP-binding protein engA [Mycoplasma putrefaciens KS1]
gi|343957061|gb|AEM68776.1| GTP-binding protein engA [Mycoplasma putrefaciens KS1]
Length = 435
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 110/197 (55%), Gaps = 34/197 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS+LFNR++ ++IV D+PGVTRDR+Y + W EF+++DTGG+
Sbjct: 6 VAIVGRPNVGKSSLFNRIIKEKKSIVEDKPGVTRDRIYANAEWLTREFIVIDTGGI---- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+E A+ I+ QA A++E+ VIIF++D Q G
Sbjct: 62 -----------------------TLKETEFAK---EIKIQAEIALQEADVIIFVLDSQQG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGTGT 344
+T D+ +A L K K +I+ NK + + GI + E+ SLGF + IS+ G G
Sbjct: 96 VTNEDKIVAKMLYKT--KKPVIVVANKYDKKQTGI-ESYEYLSLGFGQAIMISSTHGIGI 152
Query: 345 GELLDLVCSELKKVEVC 361
G+LLD V + + K ++
Sbjct: 153 GDLLDKVVNLMPKNQIT 169
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 43/69 (62%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
+ ++AI+G+PNVGKS+L N LVG R IV D G T D + + + + +++L+DT G+
Sbjct: 174 ITKIAIIGKPNVGKSSLINSLVGQERMIVSDLAGTTLDAVDTKFKYHQKDYLLIDTAGIR 233
Query: 223 NVSKSQPNI 231
+K I
Sbjct: 234 KKAKVYQGI 242
>gi|149923268|ref|ZP_01911678.1| GTP-binding protein EngA [Plesiocystis pacifica SIR-1]
gi|149815865|gb|EDM75385.1| GTP-binding protein EngA [Plesiocystis pacifica SIR-1]
Length = 487
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 104/193 (53%), Gaps = 33/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAI+GRPNVGKS LFNRLVG AIV D PGVTRDR+YG + W F++VDTGGV
Sbjct: 28 PLVAIIGRPNVGKSTLFNRLVGRREAIVEDRPGVTRDRLYGVASWEGRHFLVVDTGGV-- 85
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
D ++ T +P I QA A+EE+ +I+F+VD +
Sbjct: 86 ----------DPSLDTG-----------------LPGHIRSQAEVAMEEADLILFVVDAK 118
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGT 342
G TA D +IA LR++ K ++LA NK +SP + + + LG + +SA G
Sbjct: 119 EGATAVDIDIAAELRRS--GKPVMLAANKADSPSRE-LAAAAMHELGLGEVHAVSAAHGR 175
Query: 343 GTGELLDLVCSEL 355
G G+ D + L
Sbjct: 176 GVGDFCDALLERL 188
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 70/154 (45%), Gaps = 29/154 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R+A +GRPN GKS L N L+ R IV D PG TRD +Y + + + +L DT G L
Sbjct: 204 RIAFIGRPNAGKSTLVNTLLEEQRVIVSDTPGTTRDPVYLPFRYKDRDLVLTDTAG-LRR 262
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K ME LA +I +E + V++ ++D
Sbjct: 263 RKQIARAMEKLAAIKSI--------------------------RTMERTQVVVLVIDASQ 296
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+T D+ +A + K +++A++K + R+
Sbjct: 297 GVTDQDQRLARMAFER--GKGVVVALHKWDLIRR 328
>gi|450161423|ref|ZP_21880495.1| GTP-binding protein EngA [Streptococcus mutans 66-2A]
gi|449238689|gb|EMC37441.1| GTP-binding protein EngA [Streptococcus mutans 66-2A]
Length = 436
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 107/196 (54%), Gaps = 38/196 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKSALFNR+ G +IV D GVTRDR+Y ++ W +F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSALFNRIAGERISIVEDVEGVTRDRIYTKAEWLNRQFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+ +V
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVCVVSA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAI 339
+ G+T ADE +A L + + K +ILAVNK ++P R I +F++LG P P+S+
Sbjct: 93 KEGITDADEYVAKILYRTH--KPVILAVNKVDNPEMRSAIY---DFYALGLGDPYPVSSA 147
Query: 340 SGTGTGELLDLVCSEL 355
G GTG++LD + L
Sbjct: 148 HGIGTGDVLDAIVDNL 163
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 94/198 (47%), Gaps = 41/198 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
+ +++GRPNVGKS+L N ++G +R I G TRD + +F E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAI-DTTFTDEEGQEFTMIDTAGMR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A AI+ S +++ +++
Sbjct: 235 KSGKVYEN-------------------TEKYSVMR--------AMRAIDRSDIVLMVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSE--------FWSLGFSPL 334
+ G+ D+ IA + + K I++ VNK ++ +K V++ F + ++P+
Sbjct: 268 EEGIREYDKRIAGFAHE--AGKGIVVVVNKWDAIKKDNRTVAQWEADIRDNFQYIPYAPI 325
Query: 335 P-ISAISGTGTGELLDLV 351
+SA++ +L D++
Sbjct: 326 VFVSAVTKQRLHKLPDVI 343
>gi|295132650|ref|YP_003583326.1| GTP-binding protein EngA [Zunongwangia profunda SM-A87]
gi|294980665|gb|ADF51130.1| GTP-binding protein EngA [Zunongwangia profunda SM-A87]
Length = 434
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 107/191 (56%), Gaps = 33/191 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS FNRL+ AIV GVTRDR YG+S W F L+DTGG +
Sbjct: 5 VAIVGRPNVGKSTFFNRLIQRREAIVDSVSGVTRDRHYGKSDWNGRNFSLIDTGGYV--- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
IG + + + I++Q AI E+ IIF+VD ++G
Sbjct: 62 ---------------IGSDDV-----------FEAEIDKQVELAIGEADAIIFMVDVESG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP-LPISAISGTGT 344
+T DE++A LRK ++K + LAVNK ++ ++ + EF++LG PI++ +G+GT
Sbjct: 96 ITPMDEDVAILLRK--VNKPVFLAVNKVDNNKR-LENAVEFYALGLGEYFPIASTNGSGT 152
Query: 345 GELLDLVCSEL 355
G+LLD V L
Sbjct: 153 GDLLDAVIESL 163
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 71/155 (45%), Gaps = 29/155 (18%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
E LPR A+VGRPN GKS+ N L+G +R IV D G TRD + + EF LVDT
Sbjct: 171 ESELPRFAVVGRPNAGKSSFINALIGEDRYIVTDIAGTTRDSIDTKYNRFGFEFNLVDTA 230
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G+ SK + EDL + + ++ AIE + V + +
Sbjct: 231 GIRRKSK----VKEDLEFYSVM-----------------------RSVRAIENADVCLLV 263
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
+D G + I WL + K I++ VNK +
Sbjct: 264 LDATRGFDGQVQNIF-WLAQRNR-KGIVILVNKWD 296
>gi|88858476|ref|ZP_01133118.1| GTP-binding protein EngA [Pseudoalteromonas tunicata D2]
gi|88820093|gb|EAR29906.1| GTP-binding protein EngA [Pseudoalteromonas tunicata D2]
Length = 492
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 103/189 (54%), Gaps = 32/189 (16%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP +A+VGRPNVGKS LFNRL A+V D PG+TRDR YG++ + E+EF++VDTGG+
Sbjct: 1 MLPVIALVGRPNVGKSTLFNRLTRSRDALVADFPGLTRDRKYGQAKYDEYEFIVVDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
EGI L E Q+ AIEE+ V++FLVD
Sbjct: 61 DGSE------------------EGIELEMAE------------QSLLAIEEADVVMFLVD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAIS 340
+AG+TAAD+ IA+ LRK K I L NK + +EF+ L + I+A
Sbjct: 91 ARAGMTAADQAIANHLRKLNTQKSIFLVANKIDGL-DADSSCAEFYQLALGEVYQIAASH 149
Query: 341 GTGTGELLD 349
G G +LL+
Sbjct: 150 GRGVTQLLE 158
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 93/194 (47%), Gaps = 36/194 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS L NR++G R IV D PG TRD +Y + E++L+DT GV
Sbjct: 206 KLAIIGRPNVGKSTLTNRILGEERVIVYDMPGTTRDSIYIPMTRNDQEYVLIDTAGVRK- 264
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K ++ E ++ T+ AIE++ V++ +VD +
Sbjct: 265 RKKVSDVAEKFSVIKTL--------------------------KAIEDANVVLLVVDARE 298
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSEFWSLGFSPLP----IS 337
G++ D + + + + +++AVNK + K ++ LGF IS
Sbjct: 299 GISDQDLSLLGFALNS--GRSLVIAVNKWDGLDEYVKTRIKTELDRRLGFIDFARIHFIS 356
Query: 338 AISGTGTGELLDLV 351
A+ GTG G L + V
Sbjct: 357 ALHGTGVGHLFESV 370
>gi|262196911|ref|YP_003268120.1| ribosome-associated GTPase EngA [Haliangium ochraceum DSM 14365]
gi|262080258|gb|ACY16227.1| ribosome-associated GTPase EngA [Haliangium ochraceum DSM 14365]
Length = 518
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 109/193 (56%), Gaps = 32/193 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS L+NRLVGG A+V D PG+TRDR YG + H LVDTGG+
Sbjct: 4 PLIAIVGRPNVGKSTLYNRLVGGRPALVHDTPGLTRDRRYGAFSYMGHRLRLVDTGGL-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
P EAA + + I RQA AA++E+ ++F++D
Sbjct: 62 ----DP----------------------EAAKEVIGAGIHRQADAALQEANAVLFVLDAT 95
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGT 342
AG+T D E+A LRK +DK +++ NK + ++ ++ +E ++LG + P+SA G
Sbjct: 96 AGITPLDHEVASKLRK--LDKPLLVCANKVDHAKREVL-TAELFALGLGDVYPVSATHGR 152
Query: 343 GTGELLDLVCSEL 355
G ++L+ + + L
Sbjct: 153 GVDDMLEALVATL 165
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 95/196 (48%), Gaps = 39/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
RVA++G+PN GKS+L NRLVG R++V +PG T D + + ++LVDT G+
Sbjct: 243 RVAMLGKPNAGKSSLVNRLVGSERSLVHHQPGTTMDPVDTPFEFAGRSYVLVDTAGIRRR 302
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
++ + E +A++ I + IE + +++ ++DG+
Sbjct: 303 ARVEAE-TEKIAVSMAI--------------------------SQIERADIVVLVIDGKL 335
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS--------LGFSPLP- 335
G + D +A + + + +++AVNK + G+ S+ S L ++P+
Sbjct: 336 GPSEQDARLAGLVEDS--GRGLVVAVNKVDL-LSGVGAGSKVKSALSDTLHFLSYAPMVL 392
Query: 336 ISAISGTGTGELLDLV 351
+SA+ G G +LL V
Sbjct: 393 VSALRGDGVADLLSTV 408
>gi|389575878|ref|ZP_10165906.1| ribosome-associated GTPase EngA [Eubacterium cellulosolvens 6]
gi|389311363|gb|EIM56296.1| ribosome-associated GTPase EngA [Eubacterium cellulosolvens 6]
Length = 443
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 104/193 (53%), Gaps = 32/193 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN L G +IV D PGVTRDR+Y W HEF ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNALAGERISIVKDTPGVTRDRIYADVTWLNHEFTMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P+ D+ + + QA A+E + VIIF+ D +
Sbjct: 62 ----EPD-SSDIIL----------------------KQMREQAVIAMETADVIIFITDVR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL AD ++A LRK+ K ++LAVNK + + + + EF++LG P ISA
Sbjct: 95 QGLVDADLQVATMLRKS--KKPVVLAVNKVDDFKTQEIGIYEFYNLGIGEPHAISAEGKM 152
Query: 343 GTGELLDLVCSEL 355
G G+LLD+V S
Sbjct: 153 GLGDLLDVVISHF 165
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 29/155 (18%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P++AIVG+PNVGKS++ N+L+G NR IV D G TRD + ++ +DT G+
Sbjct: 178 PKIAIVGKPNVGKSSIINKLLGTNRVIVSDIAGTTRDAIDTVIKRNGKDYTFIDTAGLRR 237
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
SK + +E +I T+ AA+E + + ++D
Sbjct: 238 KSKIKEE-LERYSIVRTV--------------------------AAVERCDIAVVVIDAV 270
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+T D +IA K +I+AVNK ++ K
Sbjct: 271 EGITEQDAKIAGIAHDR--GKGLIIAVNKWDAIEK 303
>gi|450107362|ref|ZP_21860991.1| GTP-binding protein EngA [Streptococcus mutans SF14]
gi|449222057|gb|EMC21798.1| GTP-binding protein EngA [Streptococcus mutans SF14]
Length = 436
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 107/196 (54%), Gaps = 38/196 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKSALFNR+ G +IV D GVTRDR+Y ++ W +F ++DTGG+
Sbjct: 3 LPTVAIVGRPNVGKSALFNRIAGERISIVEDVEGVTRDRIYTKAEWLNRQFSIIDTGGID 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+V A I+ QA A+ E+ VI+ +V
Sbjct: 63 DVD------------------------------APFMEQIKHQADIAMTEADVIVCVVSA 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAI 339
+ G+T ADE +A L + + K +ILAVNK ++P R I +F++LG P P+S+
Sbjct: 93 KEGITDADEYVAKILYRTH--KPVILAVNKVDNPEMRSAIY---DFYALGLGEPYPVSSA 147
Query: 340 SGTGTGELLDLVCSEL 355
G GTG++LD + L
Sbjct: 148 HGIGTGDVLDAIVDNL 163
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 93/198 (46%), Gaps = 41/198 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
+ +++GRPNVGKS+L N ++G +R I G TRD + +F E EF ++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAI-DTTFTDEEGQEFTMIDTAGMR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K N T + +V R A AI+ S +++ +++
Sbjct: 235 KSGKVYEN-------------------TEKYSVMR--------AMRAIDRSDIVLMVLNA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSE--------FWSLGFSPL 334
+ G+ D+ IA + + K I++ VNK ++ +K V + F + ++P+
Sbjct: 268 EEGIREYDKRIAGFAHE--AGKGIVVVVNKWDAIKKDNRTVVQWEADIRDNFQYIPYAPI 325
Query: 335 P-ISAISGTGTGELLDLV 351
+SA++ +L D++
Sbjct: 326 VFVSAVTKQRLHKLPDVI 343
>gi|394987681|ref|ZP_10380520.1| ribosome-associated GTPase EngA [Sulfuricella denitrificans skB26]
gi|393792900|dbj|GAB70159.1| ribosome-associated GTPase EngA [Sulfuricella denitrificans skB26]
Length = 465
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 102/190 (53%), Gaps = 33/190 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P + +VGRPNVGKS LFNRL A+V D PG+TRDR YG G+ +++VDTGG
Sbjct: 3 PTLVLVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGHGRVGDRPYLVVDTGGFEP 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
V+K I+ ++A RQ A+ E+ I+FLVD +
Sbjct: 63 VAKD--GILHEMA---------------------------RQTLQAVAEADAIVFLVDAR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL A D+ IAD LRK M + + LAVNK E R+ ++ +EF+ LG PL IS G
Sbjct: 94 QGLAAQDKIIADQLRK--MGRPLFLAVNKAEGMRRDVV-AAEFYELGLGDPLVISGAHGE 150
Query: 343 GTGELLDLVC 352
G +L++L
Sbjct: 151 GVHDLVELAL 160
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 93/192 (48%), Gaps = 36/192 (18%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P++AIVGRPNVGKS L N L+G R I D+PG TRD +Y + L+DT G+
Sbjct: 176 PKIAIVGRPNVGKSTLVNSLLGEERVIAFDQPGTTRDSIYIDFERDSKYYTLIDTAGIRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K I E ++ T+ A+E++ V++ ++D +
Sbjct: 236 RGKVFEAI-EKFSVVKTL--------------------------QAVEDANVVVLVLDAR 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCE---SPRKGIMQ---VSEFWSLGFSPLP-I 336
++ D IA ++ ++ + +++AVNK + + R+ +++ + L F+ I
Sbjct: 269 QDVSEQDAHIAGFILES--GRALVVAVNKWDDLSADRREVVKSDIARKLQFLDFAKFHYI 326
Query: 337 SAISGTGTGELL 348
SA+ G+G G L
Sbjct: 327 SALQGSGVGGLF 338
>gi|383810865|ref|ZP_09966349.1| ribosome-associated GTPase EngA [Prevotella sp. oral taxon 306 str.
F0472]
gi|383356504|gb|EID34004.1| ribosome-associated GTPase EngA [Prevotella sp. oral taxon 306 str.
F0472]
Length = 437
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 105/192 (54%), Gaps = 33/192 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRL AIV D G TRDR YG+ W EF +VDTGG V
Sbjct: 5 VAIVGRPNVGKSTLFNRLTQTRHAIVSDTAGTTRDRQYGKCQWNGREFSVVDTGGW--VV 62
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
KS ++ ED I +Q A EE+ +++FLVD + G
Sbjct: 63 KSD-DVFED--------------------------AIRKQVLVATEEADLVLFLVDTETG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+T DE++A LR+ + ++L NK ++ + Q +EF+ LG P+ ISA +G GT
Sbjct: 96 VTDWDEDVAMILRRTKLP--VLLVANKVDNSGE-YYQAAEFYKLGLGDPICISAATGGGT 152
Query: 345 GELLDLVCSELK 356
G+LLD + +LK
Sbjct: 153 GDLLDTLLEKLK 164
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 75/152 (49%), Gaps = 29/152 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
+PR A+VGRPN GKS++ N +G +R IV + G TRD +Y R +F LVDT G+
Sbjct: 175 IPRFAVVGRPNAGKSSIINAFIGEDRNIVTEIAGTTRDSIYTRYTKFGFDFYLVDTAGI- 233
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + + EDL + + ++ +IE + V I ++D
Sbjct: 234 ---RRKNKVTEDLEFYSVM-----------------------RSIRSIENADVCILMLDA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
G+ + D I +++N +K +++ VNK +
Sbjct: 268 TRGIESQDMNIFQLIQRN--NKSLVVVVNKWD 297
>gi|54307962|ref|YP_128982.1| GTP-binding protein EngA [Photobacterium profundum SS9]
gi|81828838|sp|Q6LU45.1|DER_PHOPR RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|46912388|emb|CAG19180.1| putative GTP-binding protein [Photobacterium profundum SS9]
Length = 493
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 104/192 (54%), Gaps = 40/192 (20%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YGR+ EHEF+++DTGG+
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAELEEHEFIVIDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+G T E +M Q+ AAIEE+ V++FLVD
Sbjct: 61 ----------------------DG----TEEGVETKMAE----QSLAAIEEADVVLFLVD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSPL-PIS 337
G+AGLT +DE IA LR DK L VNK + GI +EFW LG + ++
Sbjct: 91 GRAGLTVSDEAIAKHLRSR--DKPTFLVVNKID----GIDADSACAEFWKLGVDAMYQVA 144
Query: 338 AISGTGTGELLD 349
A G L++
Sbjct: 145 AAHNRGVTALME 156
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 95/199 (47%), Gaps = 36/199 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS L NR++G R +V D PG TRD +Y E++L+DT GV
Sbjct: 206 KLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGQEYVLIDTAGVRR- 264
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K+ ++E ++ T+ A+E++ V++ ++D +
Sbjct: 265 RKNMNQVVEKFSVIQTL--------------------------KAVEDANVVLLIIDARE 298
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQ--VSEF-WSLGFSPLP----IS 337
++ D + ++ + + ++LAVNK + + + SE LGF IS
Sbjct: 299 NISDQDLSLLGFVLNS--GRSLVLAVNKWDGLDNEVKERVKSELDRRLGFIDFARIHFIS 356
Query: 338 AISGTGTGELLDLVCSELK 356
A+ GTG G L D V K
Sbjct: 357 ALHGTGVGHLYDSVIEAYK 375
>gi|268318173|ref|YP_003291892.1| small GTP-binding protein [Rhodothermus marinus DSM 4252]
gi|262335707|gb|ACY49504.1| small GTP-binding protein [Rhodothermus marinus DSM 4252]
Length = 434
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 102/191 (53%), Gaps = 33/191 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS FNRL + AI D+PGVTRDR+YG + W F +VDTGG + S
Sbjct: 4 VAIVGRPNVGKSTFFNRLTRSHEAITHDQPGVTRDRVYGTAEWNGVRFSVVDTGGYVPNS 63
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+I E I Q AIEE+ I+F+VD G
Sbjct: 64 S---DIFE--------------------------QAIREQVQIAIEEADAILFMVDVTTG 94
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGTGT 344
+T D+ +A+ LR+ DK + + NK ++ + + S F+ LG S + PISA+SG GT
Sbjct: 95 VTDLDDALAELLRRT--DKPVFVVANKADNDER-TWEASTFYQLGLSEVYPISALSGRGT 151
Query: 345 GELLDLVCSEL 355
GELLD + L
Sbjct: 152 GELLDALVKRL 162
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 75/154 (48%), Gaps = 35/154 (22%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
PR+AIVGRPNVGKS+L N L+G R+IV D G TRD ++ + E +LVDT G+
Sbjct: 175 PRLAIVGRPNVGKSSLTNALLGQERSIVTDISGTTRDAVHSVLKYYGREIVLVDTAGL-- 232
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ + I E++ T+ E A+ E V I L+D
Sbjct: 233 --RRRSRIRENIEFYATLRTE-----------------------RALRECDVAITLIDAT 267
Query: 284 AGLTAADEEI---ADWLRKNYMDKFIILAVNKCE 314
GLTA D I A+ LRK ++L VNK +
Sbjct: 268 EGLTAQDIRILRQAEELRKG-----MVLVVNKWD 296
>gi|423016755|ref|ZP_17007476.1| GTP-binding protein Der [Achromobacter xylosoxidans AXX-A]
gi|338780183|gb|EGP44598.1| GTP-binding protein Der [Achromobacter xylosoxidans AXX-A]
Length = 451
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 103/193 (53%), Gaps = 32/193 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFNRL A+V D G+TRDR YG G+ F+ +DTGG
Sbjct: 5 PVVALVGRPNVGKSTLFNRLTRSRAALVADFSGLTRDRHYGEGRVGDIPFIAIDTGGFEP 64
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
V+K +GI L + RQ AI E+ V++FLVD +
Sbjct: 65 VAK-----------------DGILLE------------MARQTRQAIAEADVVVFLVDAR 95
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGT 342
AGL A D EIA LRK+ + ++LAVNK E G ++EF LG P PISA G
Sbjct: 96 AGLNAHDHEIATLLRKSGQQR-VLLAVNKAEGMGAG-AAIAEFHELGLGQPYPISAAHGD 153
Query: 343 GTGELLDLVCSEL 355
G +L++L +L
Sbjct: 154 GIVDLIELALQDL 166
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 83/195 (42%), Gaps = 38/195 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVGRPNVGKS L N L+G R I D PG TRD + + L+DT G+
Sbjct: 187 KLAIVGRPNVGKSTLINTLMGEERVIAFDMPGTTRDAIEIDFERDGRRYTLIDTAGLRKR 246
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K + E ++ T+ AIE S V++ ++D Q
Sbjct: 247 GKVFEAV-EKFSVIKTL--------------------------QAIEASNVVLLMLDAQT 279
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKC--------ESPRKGIMQVSEFWSLGFSPLPI 336
++ D IA ++ + + ++LA+NK E + M+ F S I
Sbjct: 280 EISEQDAHIAGFVLET--GRAVVLAINKWDGLDGEEKERIEREFMRKLRFLSFA-RVHTI 336
Query: 337 SAISGTGTGELLDLV 351
SA+ G G LL V
Sbjct: 337 SALRGQGIKPLLKSV 351
>gi|309775503|ref|ZP_07670503.1| ribosome-associated GTPase EngA [Erysipelotrichaceae bacterium
3_1_53]
gi|308916597|gb|EFP62337.1| ribosome-associated GTPase EngA [Erysipelotrichaceae bacterium
3_1_53]
Length = 173
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 105/193 (54%), Gaps = 34/193 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS +FNR++G ++IV D PGVTRDR+YG++ W EF ++DTG
Sbjct: 6 VAIVGRPNVGKSTIFNRIIGERKSIVEDTPGVTRDRIYGKAEWLTREFRVIDTG------ 59
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
GI LA ++ + I Q AI+E+ I+F+V G+ G
Sbjct: 60 -------------------GIQLANQD-----FQTEINMQVEIAIDEADCIVFVVSGKDG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
LT DE +A L + K +ILAVNK + + + EF+SLG PL +S G G
Sbjct: 96 LTHDDEYVARLLHRT--KKPVILAVNKVDDFAQN-DAIYEFYSLGLGDPLAVSGAHGIGI 152
Query: 345 GELLDLVCSELKK 357
G++LD + L K
Sbjct: 153 GDVLDAIIHALPK 165
>gi|295098886|emb|CBK87975.1| ribosome-associated GTPase EngA [Eubacterium cylindroides T2-87]
Length = 329
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 83/208 (39%), Positives = 108/208 (51%), Gaps = 39/208 (18%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS +FNRL+G ++IV D PGVTRDR+YG W F ++DTGG+
Sbjct: 6 VAIVGRPNVGKSTIFNRLIGERKSIVDDTPGVTRDRIYGTVEWLTQSFHIIDTGGIQ--- 62
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+ED + I M Q AIEE+ VIIF+ + G
Sbjct: 63 ------IEDQPFSEEINM---------------------QVDIAIEEADVIIFITSAKEG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+ D IA L+K+ +K ++LAVNK ++ M V EF+SLG P+ IS G G
Sbjct: 96 VMTDDMAIARKLQKS--NKPVVLAVNKADNQELQ-MAVYEFYSLGLGDPMTISGAHGIGL 152
Query: 345 GELLDLVC-----SELKKVEVCIGFLLI 367
G+LLD V ELK E F +I
Sbjct: 153 GDLLDKVIELMPKKELKPYEGITSFCVI 180
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 29/160 (18%)
Query: 159 PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDT 218
P + ++GRPNVGKS+L N ++ +R IV + G TRD + + E+M++DT
Sbjct: 170 PYEGITSFCVIGRPNVGKSSLVNAILKEDRVIVSNIEGTTRDAIDTPFKVDDKEYMIIDT 229
Query: 219 GGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIF 278
G+ K NI E +I +A AIE S V++F
Sbjct: 230 AGIRKRGKIYENI-EKYSIL--------------------------RAMNAIERSNVVLF 262
Query: 279 LVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
++DG+ G+ D+ +A + K +I+ NK ++ K
Sbjct: 263 VIDGELGIREQDKHVAGLAHE--AGKGVIIVYNKWDTVDK 300
>gi|451812243|ref|YP_007448697.1| GTP-binding protein [Candidatus Kinetoplastibacterium galatii
TCC219]
gi|451778145|gb|AGF49093.1| GTP-binding protein [Candidatus Kinetoplastibacterium galatii
TCC219]
Length = 449
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 98/187 (52%), Gaps = 32/187 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P + +VGRPNVGKS LFNR A+V + G+TRDR+YG +G HEF+++DTGG
Sbjct: 5 PVIVLVGRPNVGKSTLFNRFTKSKDALVANFSGLTRDRIYGDGTFGNHEFIIIDTGGFEP 64
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
SK Q M + Q AI E+ ++IFLVDG+
Sbjct: 65 SSKDQ-----------------------------MYVKVANQTNQAILEADIVIFLVDGK 95
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGT 342
GL + D +IA++LRK + I+L VNK E M SEF LGF SP ISA G
Sbjct: 96 DGLCSTDYDIANFLRKLSITN-ILLVVNKSEGKNISAM-ASEFHELGFGSPFLISASHGD 153
Query: 343 GTGELLD 349
G G L++
Sbjct: 154 GVGLLIE 160
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 77/151 (50%), Gaps = 29/151 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R++IVG+PNVGKS L N ++G R I D PG TRD + + + ++L+DT G+
Sbjct: 188 RLSIVGQPNVGKSTLINSMLGEERLITFDSPGTTRDSINVDFGFLDRSYVLIDTAGLRRR 247
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
S+ + +E ++ T+ +IE+S V++ L+D
Sbjct: 248 SRVS-DYIEKFSVVKTL--------------------------QSIEKSNVVLLLLDANI 280
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCES 315
G++ D IA ++ ++ K I++A+NK +S
Sbjct: 281 GISDQDARIASYILES--GKAIVIAINKWDS 309
>gi|445498326|ref|ZP_21465181.1| GTP-binding protein EngA [Janthinobacterium sp. HH01]
gi|444788321|gb|ELX09869.1| GTP-binding protein EngA [Janthinobacterium sp. HH01]
Length = 448
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 103/187 (55%), Gaps = 33/187 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +A+VGRPNVGKS LFNRL A+V D PG+TRDR YG GE F+++DTGG
Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPFLVIDTGGFEP 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
V+K IM ++A +Q A+ E+ +++FLVDG+
Sbjct: 63 VAKE--GIMHEMA---------------------------KQTKQAVAEADIVVFLVDGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT D+ I D+LRK+ + ++L VNK E R + V++F+ LG P IS+ G
Sbjct: 94 QGLTPHDKTITDFLRKS--GRPVMLVVNKSEGMRYTAV-VADFYELGLGEPYSISSAHGD 150
Query: 343 GTGELLD 349
G +L+D
Sbjct: 151 GVADLVD 157
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 88/193 (45%), Gaps = 40/193 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++A+VGRPNVGKS L N LVG R I D PG TRD + ++ L+DT G+
Sbjct: 182 KIALVGRPNVGKSTLINTLVGEERVIAFDMPGTTRDSIEIPFERDGKQYTLIDTAGIRRR 241
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K I E ++ T+ +I E+ V++ ++D Q
Sbjct: 242 GKVFEAI-EKFSVVKTL--------------------------QSISEANVVVLMLDAQQ 274
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRK--------GIMQVSEFWSLGFSPLP- 335
++ D IA ++ + + +++AVNK + R I + +F LGF+ +
Sbjct: 275 DISEQDAHIAGFVLET--GRALVIAVNKWDGLRTDERDEIKIDIDRKLDF--LGFAKMHF 330
Query: 336 ISAISGTGTGELL 348
ISA+ G G L+
Sbjct: 331 ISALKAQGIGPLM 343
>gi|227498500|ref|ZP_03928646.1| small GTP-binding protein [Acidaminococcus sp. D21]
gi|226903958|gb|EEH89876.1| small GTP-binding protein [Acidaminococcus sp. D21]
Length = 403
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 105/193 (54%), Gaps = 33/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN +IV D PGVTRDR+Y + W + FM+VDTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNIFADSRISIVEDTPGVTRDRLYAEAEWLDRRFMMVDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
++A T +I + I QA AI+E+ VI+F+ D +
Sbjct: 62 ----------EIANTDSIAVS-----------------IREQAKIAIKEADVILFVCDAR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T D+E+A +R K ++LAVNK ++P + ++ EF++LG P ISA +
Sbjct: 95 TGVTTEDQEVAKLIR--MAQKPVVLAVNKADTPTQE-LEAYEFYNLGIGEPYMISASNRL 151
Query: 343 GTGELLDLVCSEL 355
G+LLD V S
Sbjct: 152 NLGDLLDAVVSHF 164
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 91/197 (46%), Gaps = 40/197 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VAI+GRPNVGKS++FN ++G R+IV D G TRD + ++ +DT G+
Sbjct: 180 KVAIIGRPNVGKSSIFNDIIGQTRSIVSDVAGTTRDAIDVPVMKDGQTYLFIDTAGMRRK 239
Query: 225 SK-SQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K +P +E +I T+ A++ S V++ ++D
Sbjct: 240 GKIDEP--IEKYSIIRTL--------------------------RAVDRSDVVLMVLDAV 271
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFW-----SLGFSP----L 334
G+T D++IA + + K I+L VNK + +K M + L F P +
Sbjct: 272 DGVTEQDKKIAGYAHE--AGKGIVLVVNKWDLYQKDEMSTVHYTETIRKELIFMPYANVV 329
Query: 335 PISAISGTGTGELLDLV 351
+SA++ L DL+
Sbjct: 330 YVSALTQQRISRLPDLI 346
>gi|374852463|dbj|BAL55395.1| GTP-binding protein EngA [uncultured beta proteobacterium]
Length = 455
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 105/196 (53%), Gaps = 33/196 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP + +VGRPNVGKS LFNRL A+V + PG+TRDR YGR G +++VDT G
Sbjct: 5 LPTLVLVGRPNVGKSTLFNRLTRSRDALVANVPGLTRDRRYGRGKVGGRPYLVVDTAGF- 63
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
P E L + + RQA AI E+ +++F+VDG
Sbjct: 64 -----DPTAKEGLT-----------------------AEMVRQAELAIREADLVLFVVDG 95
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+AGLT DE IAD+LR + + + VNK E + I + +EF++LGF PLPISA G
Sbjct: 96 RAGLTPHDEAIADYLRA--LGVAVRVLVNKTEGLDRAIAR-AEFYALGFGEPLPISASHG 152
Query: 342 TGTGELLDLVCSELKK 357
G E++ V + K
Sbjct: 153 DGVREMIHEVLAPFPK 168
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 87/194 (44%), Gaps = 36/194 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
RVA++GRPNVGKS L N L+G NR I D PG TRD + + LVDT GV
Sbjct: 191 RVAVLGRPNVGKSTLINALLGENRLIAYDMPGTTRDAIDVPFEHNGRAYTLVDTAGVRKK 250
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ +T TI S+I +A A+E++ V+I +D
Sbjct: 251 GR----------VTDTI---------------EKFSVI--KALQAVEQANVVILTLDATQ 283
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESP------RKGIMQVSEFWSLGFSPLP-IS 337
+ D + ++ + + +++AVNK ++ R + L F+P+ +S
Sbjct: 284 EVGEQDAHLGGFILET--GRALVIAVNKWDAADAYQRQRIKTQLAHKLAFLSFAPVVFLS 341
Query: 338 AISGTGTGELLDLV 351
A +G G L+ V
Sbjct: 342 AKTGKGLDALMRAV 355
>gi|345304470|ref|YP_004826372.1| GTP-binding protein engA [Rhodothermus marinus SG0.5JP17-172]
gi|345113703|gb|AEN74535.1| GTP-binding protein engA [Rhodothermus marinus SG0.5JP17-172]
Length = 434
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 79/199 (39%), Positives = 107/199 (53%), Gaps = 36/199 (18%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS FNRL + AI D+PGVTRDR+YG + W F +VDTGG + S
Sbjct: 4 VAIVGRPNVGKSTFFNRLTRSHEAITHDQPGVTRDRVYGTAEWNGVRFSVVDTGGYVPNS 63
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+I E I Q AIEE+ I+F+VD G
Sbjct: 64 S---DIFE--------------------------QAIREQVQIAIEEADAILFMVDVTTG 94
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGTGT 344
+T D+ +A+ LR+ DK + + NK ++ + + S F+ LG S + PISA+SG GT
Sbjct: 95 VTDLDDALAELLRRT--DKPVFVVANKADNDER-TWEASMFYQLGLSEVYPISALSGRGT 151
Query: 345 GELLDLVCSELKKVEVCIG 363
GELLD + +K++ C G
Sbjct: 152 GELLDAL---VKRLPTCNG 167
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 73/154 (47%), Gaps = 35/154 (22%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS+L N L+G R+IV D G TRD ++ + E +LVDT G+
Sbjct: 175 PHLAIVGRPNVGKSSLTNALLGQERSIVTDISGTTRDAVHSVLKYYGREIVLVDTAGL-- 232
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ + + E++ T+ E A+ V I L+D
Sbjct: 233 --RRRSRVRENIEFYATLRTE-----------------------RALRACDVAITLIDAT 267
Query: 284 AGLTAADEEI---ADWLRKNYMDKFIILAVNKCE 314
GLTA D I A+ LRK ++L VNK +
Sbjct: 268 EGLTAQDIRILRQAEELRKG-----MVLVVNKWD 296
>gi|302878616|ref|YP_003847180.1| ribosome-associated GTPase EngA [Gallionella capsiferriformans
ES-2]
gi|302581405|gb|ADL55416.1| ribosome-associated GTPase EngA [Gallionella capsiferriformans
ES-2]
Length = 470
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 76/195 (38%), Positives = 106/195 (54%), Gaps = 33/195 (16%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP + +VGRPNVGKS LFNRL A+V D+PG+TRDR YGR GE +++VDTGG+
Sbjct: 1 MLPTLVLVGRPNVGKSTLFNRLTRSRDALVADQPGLTRDRHYGRGRVGERPYLVVDTGGL 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
V+K IM ++A RQ+ A++E+ V++FLVD
Sbjct: 61 EPVAKD--GIMFEMA---------------------------RQSRQAVDEADVVLFLVD 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+AG T D IA LRK K I+L VNK E + + +EF+ LG P PIS+
Sbjct: 92 GRAGCTPQDLIIATQLRKT--GKPILLLVNKAEGMARARV-TAEFFELGLGEPYPISSAH 148
Query: 341 GTGTGELLDLVCSEL 355
G E++++
Sbjct: 149 GDNVVEVIEIALENF 163
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 93/194 (47%), Gaps = 40/194 (20%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P++AIVGRPNVGKS L N ++G R I D+PG TRD +Y ++ ++DT GV
Sbjct: 179 PKLAIVGRPNVGKSTLVNAILGEQRVIAFDQPGTTRDSIYIDFERDGKQYTIIDTAGVRR 238
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K + I E ++ T+ AIE++ V++ +VD +
Sbjct: 239 RGKVEEAI-EKFSVIKTM--------------------------QAIEDANVVVLVVDAR 271
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKC--------ESPRKGIMQVSEFWSLGFSPLP 335
+T D +AD++ + + ++LAVNK E + I + F LGF+
Sbjct: 272 DQITEQDAHVADFVLQ--AGRALVLAVNKWDGLDNHQREMVKSDIERKLHF--LGFAKRH 327
Query: 336 -ISAISGTGTGELL 348
ISA++G G +L
Sbjct: 328 YISALNGNGISNVL 341
>gi|148979611|ref|ZP_01815616.1| GTP-binding protein EngA [Vibrionales bacterium SWAT-3]
gi|145961696|gb|EDK26993.1| GTP-binding protein EngA [Vibrionales bacterium SWAT-3]
Length = 493
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 107/196 (54%), Gaps = 40/196 (20%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YG + GEHEF+++DTGG+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGHAQLGEHEFIVIDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
T E +M Q+ AAI+E+ V++F+VD
Sbjct: 61 --------------------------DGTEEGVETKMAE----QSLAAIDEADVVLFMVD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSPL-PIS 337
G+AGLT +D IA LR+ ++K +L VNK + GI ++FW LG + I+
Sbjct: 91 GRAGLTPSDVAIAKHLRQ--LEKPSMLVVNKVD----GIDPDAASADFWQLGVEDMYQIA 144
Query: 338 AISGTGTGELLDLVCS 353
A G G L+DL +
Sbjct: 145 AAHGRGVTALIDLALN 160
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 101/220 (45%), Gaps = 40/220 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS L NR++G R +V D PG TRD +Y E E++L+DT GV
Sbjct: 207 KLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMSRDEREYVLIDTAGV--- 263
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + NI E + + + + A+E++ V++ ++D +
Sbjct: 264 -RRRKNINETVEKFSVV-----------------------KTLKAVEDANVVLLVIDARE 299
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF---WSLGFSPLP----IS 337
++ D + + + I++AVNK + + + + LGF IS
Sbjct: 300 NISDQDLSLLGFALN--AGRSIVIAVNKWDGLDNDVKERVKKELDRRLGFVDFARIHFIS 357
Query: 338 AISGTGTGELLDLVCSELKKVEVCIGFLLICNAITKIFHI 377
A+ GTG G L + V K +G + +T+I +
Sbjct: 358 ALHGTGVGHLFESVQEAYKSATTRVG----TSVLTRIMKM 393
>gi|387129675|ref|YP_006292565.1| GTP-binding protein EngA [Methylophaga sp. JAM7]
gi|386270964|gb|AFJ01878.1| GTP-binding protein EngA [Methylophaga sp. JAM7]
Length = 469
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 107/191 (56%), Gaps = 34/191 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+A++GRPNVGKS LFNRL A+V D G+TRDR+YG +F+L+DTGG+ N +
Sbjct: 5 IALLGRPNVGKSTLFNRLTRSRDALVADHAGLTRDRIYGHVRDDNAQFILIDTGGLTNET 64
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
S M ++ +QA AI+E+ +++FLVDG+AG
Sbjct: 65 DS------------------------------MSELMRKQAALAIDEADLMVFLVDGRAG 94
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
L ADEEIA LR + K ++L +NK E ++ ++ +EF+S+G P+ ISA G G
Sbjct: 95 LLPADEEIARLLRN--VGKPVLLVINKSEGEQRELV-AAEFYSMGLGEPVVISATQGRGI 151
Query: 345 GELLDLVCSEL 355
LL+ + + L
Sbjct: 152 DRLLNHITNIL 162
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 89/195 (45%), Gaps = 38/195 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R+AIVGRPNVGKS L NRL+G R + D PG TRD +Y ++ +DT GV
Sbjct: 184 RLAIVGRPNVGKSTLVNRLLGEERVVAFDAPGTTRDSIYIPFEKDGTQYTFIDTAGVRRR 243
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK +E ++ T+ A+E + V++ +VD Q
Sbjct: 244 SKVS-EALEKFSVVKTL--------------------------QAVEAANVVMLVVDAQE 276
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRK--------GIMQVSEFWSLGFSPLPI 336
G+ D +A + ++ + +++AVNK + K I + F + + I
Sbjct: 277 GIVDQDLHLAGLIIES--GRAVVIAVNKWDGLEKQEREWVASNIERRLPFLTFAKTHF-I 333
Query: 337 SAISGTGTGELLDLV 351
SA+ G+G G LL V
Sbjct: 334 SALHGSGVGLLLKSV 348
>gi|417950299|ref|ZP_12593423.1| GTP-binding protein Der [Vibrio splendidus ATCC 33789]
gi|342806778|gb|EGU41990.1| GTP-binding protein Der [Vibrio splendidus ATCC 33789]
Length = 493
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 107/196 (54%), Gaps = 40/196 (20%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YG + GEHEF+++DTGG+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGHAQLGEHEFIVIDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
T E +M Q+ AAI+E+ V++F+VD
Sbjct: 61 --------------------------DGTEEGVETKMAE----QSLAAIDEADVVLFMVD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSPL-PIS 337
G+AGLT +D IA LR+ ++K +L VNK + GI ++FW LG + I+
Sbjct: 91 GRAGLTPSDVAIAKHLRQ--LEKPSMLVVNKVD----GIDPDAASADFWQLGVEDMYQIA 144
Query: 338 AISGTGTGELLDLVCS 353
A G G L+DL +
Sbjct: 145 AAHGRGVTALIDLALN 160
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 101/220 (45%), Gaps = 40/220 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS L NR++G R +V D PG TRD +Y E E++L+DT GV
Sbjct: 207 KLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMSRDEREYVLIDTAGV--- 263
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + NI E + + + + A+E++ V++ ++D +
Sbjct: 264 -RRRKNINETVEKFSVV-----------------------KTLKAVEDANVVLLVIDARE 299
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF---WSLGFSPLP----IS 337
++ D + + + I++AVNK + + + + LGF IS
Sbjct: 300 NISDQDLSLLGFALN--AGRSIVIAVNKWDGLDNDVKERVKKELDRRLGFVDFARIHFIS 357
Query: 338 AISGTGTGELLDLVCSELKKVEVCIGFLLICNAITKIFHI 377
A+ GTG G L + V K +G + +T+I +
Sbjct: 358 ALHGTGVGHLFESVQEAYKSATTRVG----TSVLTRIMKM 393
>gi|94267274|ref|ZP_01290827.1| Small GTP-binding protein domain:GTP-binding [delta proteobacterium
MLMS-1]
gi|93452066|gb|EAT02754.1| Small GTP-binding protein domain:GTP-binding [delta proteobacterium
MLMS-1]
Length = 453
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 106/194 (54%), Gaps = 30/194 (15%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA+VGRPNVGKS+LFNR+ GG +AIV PGVTRDR Y + W + FML+DTGG+
Sbjct: 7 LPLVALVGRPNVGKSSLFNRIAGGRKAIVDPTPGVTRDRHYQQVSWNQRHFMLIDTGGIE 66
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
S+ +P+ +I Q+ A+ E+ VI+ L+D
Sbjct: 67 GDKSSE-----------------VPIN----------RLIGEQSRQAVAEADVILLLLDA 99
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISG 341
+ G+T D ++ + LR++ K + VNK ++P + + F+ LG L P+SA G
Sbjct: 100 RQGVTPDDYQVVEILRRS--GKPVHYLVNKIDAPEQVDKLLPTFYELGVPQLWPLSASHG 157
Query: 342 TGTGELLDLVCSEL 355
G ELLD V +EL
Sbjct: 158 LGLAELLDAVVAEL 171
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 95/194 (48%), Gaps = 34/194 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
RVA +GRPNVGKS+L NRL+G R +V + PG TRD + GE ++ L+DT G+
Sbjct: 190 RVAFIGRPNVGKSSLINRLLGSERMVVSEVPGTTRDSVDSLLIRGEKQYRLIDTAGIRRK 249
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K + ++ E ++ +A AA+E + + ++D
Sbjct: 250 GKVRESV-EKFSVM--------------------------RALAALERCDLALLVIDAAE 282
Query: 285 GLTAADEEIADW-LRKN-----YMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PIS 337
G+T D ++ + L + ++K+ +L ++ + R +G++P+ +S
Sbjct: 283 GITEQDTKVIGYGLERGRACLVLLNKWDLLKDDRRQQKRLLAEVERAVHFVGYAPVHKLS 342
Query: 338 AISGTGTGELLDLV 351
A+SG+G G LL LV
Sbjct: 343 ALSGSGVGRLLPLV 356
>gi|91784203|ref|YP_559409.1| GTP-binding protein EngA [Burkholderia xenovorans LB400]
gi|123168328|sp|Q13X32.1|DER_BURXL RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|91688157|gb|ABE31357.1| Small GTP-binding protein [Burkholderia xenovorans LB400]
Length = 445
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 103/189 (54%), Gaps = 33/189 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+ P +A+VGRPNVGKS LFNRL A+V D PG+TRDR YG GE +++VDTGG
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRTGERPYLVVDTGGF 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
V+K I+ ++A RQ A+EES +++F+VD
Sbjct: 61 EPVAKD--GILHEMA---------------------------RQTRQAVEESDIVVFIVD 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ GL D+ IAD+LRK + + I L VNK E + + ++F+ LG P ISA
Sbjct: 92 GRNGLAPQDKSIADYLRK--VGRPIFLVVNKAEGMKYSTV-AADFYELGLGDPRAISAAH 148
Query: 341 GTGTGELLD 349
G G E+++
Sbjct: 149 GDGVTEMIN 157
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 70/151 (46%), Gaps = 29/151 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVGRPNVGKS L N LVG R I D PG TRD +Y G + L+DT G+
Sbjct: 181 KIAIVGRPNVGKSTLINALVGEERVIAFDMPGTTRDSIYVDFERGGKPYTLIDTAGLRRR 240
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K I E ++ T+ +I ++ V+I L+D +
Sbjct: 241 GKVFEAI-EKFSVVKTL--------------------------QSISDANVVILLLDARQ 273
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCES 315
++ D IA ++ + + +++ VNK +
Sbjct: 274 DISEQDAHIAGFVVEQ--GRALVVGVNKWDG 302
>gi|91775967|ref|YP_545723.1| GTP-binding protein EngA [Methylobacillus flagellatus KT]
gi|91709954|gb|ABE49882.1| Small GTP-binding protein domain [Methylobacillus flagellatus KT]
Length = 499
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/195 (39%), Positives = 106/195 (54%), Gaps = 33/195 (16%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP + +VGRPNVGKS LFNRL A+V D PG+TRDR YGR G +++VDTGG
Sbjct: 2 MLPTIVLVGRPNVGKSTLFNRLTKTRDALVADLPGLTRDRHYGRGVVGSKPYLVVDTGGF 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ S I++++A RQ AI+E+ V+IFLVD
Sbjct: 62 EPLVDS--GILKEMA---------------------------RQTLLAIDEADVVIFLVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ GL D+ IA+ LRK+ + I+LAVNK E ++ I +EF LG PL IS+
Sbjct: 93 GRNGLAPQDKVIAERLRKS--QRPILLAVNKTEGMQRAIAS-AEFHELGLGHPLSISSAH 149
Query: 341 GTGTGELLDLVCSEL 355
G G +L++L
Sbjct: 150 GEGVRDLVELALENF 164
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 93/205 (45%), Gaps = 44/205 (21%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
+P+VAIVGRPNVGKS L N L+G R I D+PG TRD +Y + ++DT GV
Sbjct: 178 VPKVAIVGRPNVGKSTLVNALLGEERVIAFDQPGTTRDSIYLDLERNGKRYTIIDTAGVR 237
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K + E ++ T+ AIEE+ V I +VD
Sbjct: 238 RRGKVFEAV-EKFSVIKTM--------------------------QAIEEANVAILVVDA 270
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCES----PRKGI-------MQVSEFWSLGF 331
Q G+T D ++ ++ + + +++AVNK + R+ I +Q +F +
Sbjct: 271 QEGITEQDAHVSAYILDS--GRALVVAVNKWDGLEDDKREWIKREIDRKLQFLDFAKFHY 328
Query: 332 SPLPISAISGTGTGELLDLVCSELK 356
ISA+ G GEL V + K
Sbjct: 329 ----ISALRKKGLGELFHSVDAAYK 349
>gi|352684547|ref|YP_004896532.1| small GTP-binding protein [Acidaminococcus intestini RyC-MR95]
gi|350279202|gb|AEQ22392.1| small GTP-binding protein [Acidaminococcus intestini RyC-MR95]
Length = 448
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 105/193 (54%), Gaps = 33/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN +IV D PGVTRDR+Y + W + FM+VDTGG+
Sbjct: 10 PIVAIVGRPNVGKSTLFNIFADSRISIVEDTPGVTRDRLYAEAEWLDRRFMMVDTGGI-- 67
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
++A T +I + I QA AI+E+ VI+F+ D +
Sbjct: 68 ----------EIANTDSIAVS-----------------IREQAKIAIKEADVILFVCDAR 100
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T D+E+A +R K ++LAVNK ++P + ++ EF++LG P ISA +
Sbjct: 101 TGVTTEDQEVAKLIR--MAQKPVVLAVNKADTPTQE-LEAYEFYNLGIGEPYMISASNRL 157
Query: 343 GTGELLDLVCSEL 355
G+LLD V S
Sbjct: 158 NLGDLLDAVVSHF 170
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 91/197 (46%), Gaps = 40/197 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VAI+GRPNVGKS++FN ++G R+IV D G TRD + ++ +DT G+
Sbjct: 186 KVAIIGRPNVGKSSIFNDIIGQTRSIVSDVAGTTRDAIDVPVMKDGQTYLFIDTAGMRRK 245
Query: 225 SK-SQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K +P +E +I T+ A++ S V++ ++D
Sbjct: 246 GKIDEP--IEKYSIIRTL--------------------------RAVDRSDVVLMVLDAV 277
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFW-----SLGFSP----L 334
G+T D++IA + + K I+L VNK + +K M + L F P +
Sbjct: 278 DGVTEQDKKIAGYAHE--AGKGIVLVVNKWDLYQKDEMSTVHYTETIRKELIFMPYANVV 335
Query: 335 PISAISGTGTGELLDLV 351
+SA++ L DL+
Sbjct: 336 YVSALTQQRISRLPDLI 352
>gi|342210454|ref|ZP_08703221.1| GTP-binding protein Der [Mycoplasma anatis 1340]
gi|341579516|gb|EGS29528.1| GTP-binding protein Der [Mycoplasma anatis 1340]
Length = 433
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 99/190 (52%), Gaps = 35/190 (18%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAI+G+PNVGKS LFNRLVG +IV DEPGVTRDR+Y W H ++DTGG
Sbjct: 5 VAIIGKPNVGKSTLFNRLVGKRSSIVYDEPGVTRDRLYEAITWTGHTIKIIDTGG----- 59
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
I +E P + I+ QA AIEE+ VIIF++DG
Sbjct: 60 ---------------IEIENKPFQEQ----------IQIQAKIAIEEADVIIFIIDGTME 94
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLPISAISGTGTG 345
LT D I + LRK+ +K II+ NK ES + + + LG ISA+ G G G
Sbjct: 95 LTNDDAFIMNILRKS--NKPIIIGANKLESNQDFDYSL---YKLGGEIFRISALHGEGVG 149
Query: 346 ELLDLVCSEL 355
ELLD V L
Sbjct: 150 ELLDEVVKNL 159
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 29/167 (17%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
E L +++I+G+PN GKS+L N L R+IV D G TRD + + G+ + ++DT
Sbjct: 166 EEELFKLSIIGKPNAGKSSLLNNLAKEERSIVSDIAGTTRDSVKTKVKIGDKFYNVIDTA 225
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G++ SK L A M +M ++ ES + + L
Sbjct: 226 GIMRKSK---------------------LVESVDHYALMRAM------NSLSESDLSLIL 258
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
+D L+ D I + +N DK II+ VNK + K +++F
Sbjct: 259 IDATTELSHFDARIIGYALEN--DKPIIIVVNKWDLVEKETNTMAQF 303
>gi|348590095|ref|YP_004874557.1| GTP-binding protein EngA [Taylorella asinigenitalis MCE3]
gi|347973999|gb|AEP36534.1| GTP-binding protein EngA [Taylorella asinigenitalis MCE3]
Length = 459
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/197 (40%), Positives = 105/197 (53%), Gaps = 33/197 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFNRL AIV D G+TRDR YG G+ F+++DTGG
Sbjct: 5 PVVALVGRPNVGKSTLFNRLTRSRNAIVADYSGLTRDRHYGEGRVGDRPFLVIDTGGF-- 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K + IM+++A RQ AI ES V+IFLVD +
Sbjct: 63 EPKVKTGIMKEMA---------------------------RQTELAISESDVVIFLVDAR 95
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
+G+ A D EIA LRK + +ILAVNK E + +EF LG PL IS+ G
Sbjct: 96 SGINAHDHEIAVKLRKVGVP--VILAVNKAEGLQAS-QASAEFHELGLGEPLAISSAHGD 152
Query: 343 GTGELLDLVCSELKKVE 359
G L+++ S++ +VE
Sbjct: 153 GVANLIEVALSKIPQVE 169
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 90/194 (46%), Gaps = 36/194 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++A+VGRPNVGKS L N L+G R I D PG TRD + ++ L+DT G+
Sbjct: 195 KLAVVGRPNVGKSTLINSLLGEQRVIAFDMPGTTRDAIEIDFESNGKKYKLIDTAGLRKR 254
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K +I E ++ T+ AIE V++ ++D Q+
Sbjct: 255 GKVFESI-EKFSVIKTL--------------------------QAIEACNVVVLILDAQS 287
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK----CESPRKGIMQVSE--FWSLGFSPLP-IS 337
++ D IA ++ ++ + +++A+NK E R+ +++ E L F+ + IS
Sbjct: 288 EISEQDAHIAGFILES--GRALVVAINKWDGLSEDKREWVIRELERKLRFLSFAKVHYIS 345
Query: 338 AISGTGTGELLDLV 351
A+ G LL V
Sbjct: 346 ALKAYGIKSLLKSV 359
>gi|385209022|ref|ZP_10035890.1| ribosome-associated GTPase EngA [Burkholderia sp. Ch1-1]
gi|385181360|gb|EIF30636.1| ribosome-associated GTPase EngA [Burkholderia sp. Ch1-1]
Length = 445
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 103/189 (54%), Gaps = 33/189 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+ P +A+VGRPNVGKS LFNRL A+V D PG+TRDR YG GE +++VDTGG
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRTGERPYLVVDTGGF 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
V+K I+ ++A RQ A+EES +++F+VD
Sbjct: 61 EPVAKD--GILHEMA---------------------------RQTRQAVEESDIVVFIVD 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ GL D+ IAD+LRK + + I L VNK E + + ++F+ LG P ISA
Sbjct: 92 GRNGLAPQDKSIADYLRK--VGRPIFLVVNKAEGMKYSTV-AADFYELGLGDPRAISAAH 148
Query: 341 GTGTGELLD 349
G G E+++
Sbjct: 149 GDGVTEMIN 157
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 70/151 (46%), Gaps = 29/151 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVGRPNVGKS L N LVG R I D PG TRD +Y G + L+DT G+
Sbjct: 181 KIAIVGRPNVGKSTLINALVGEERVIAFDMPGTTRDSIYVDFERGGKPYTLIDTAGLRRR 240
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K I E ++ T+ +I ++ V+I L+D +
Sbjct: 241 GKVFEAI-EKFSVVKTL--------------------------QSISDANVVILLLDARQ 273
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCES 315
++ D IA ++ + + +++ VNK +
Sbjct: 274 DISEQDAHIAGFVVEQ--GRALVVGVNKWDG 302
>gi|359798964|ref|ZP_09301533.1| GTP-binding protein Der [Achromobacter arsenitoxydans SY8]
gi|359363102|gb|EHK64830.1| GTP-binding protein Der [Achromobacter arsenitoxydans SY8]
Length = 450
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 103/193 (53%), Gaps = 32/193 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFNRL A+V D G+TRDR YG G+ F+ +DTGG
Sbjct: 5 PVVALVGRPNVGKSTLFNRLTRSRAALVADYSGLTRDRHYGEGRVGDIPFIAIDTGGFEP 64
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
V+K +GI L + RQ AI E+ V++FLVD +
Sbjct: 65 VAK-----------------DGILLE------------MARQTRQAIAEADVVVFLVDAR 95
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGT 342
AG+ A D EIA LRK+ + ++LAVNK E G +SEF LG P PISA G
Sbjct: 96 AGINAHDHEIAQLLRKSGQQR-VLLAVNKAEGMGLG-PAISEFHELGLGQPYPISAAHGD 153
Query: 343 GTGELLDLVCSEL 355
G +L++L +L
Sbjct: 154 GIVDLIELALKDL 166
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 29/151 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVGRPNVGKS L N +G R I D PG TRD + + L+DT G+
Sbjct: 186 KLAIVGRPNVGKSTLINTFMGEERVIAFDMPGTTRDAIEIDFERDGRRYTLIDTAGLRKR 245
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K + E ++ T+ AIE S V++ ++D Q
Sbjct: 246 GKVFEAV-EKFSVIKTL--------------------------QAIEASNVVLLMLDAQT 278
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCES 315
++ D IA ++ + + +++AVNK +
Sbjct: 279 EISEQDAHIAGFVLET--GRAVVVAVNKWDG 307
>gi|326794518|ref|YP_004312338.1| GTP-binding protein engA [Marinomonas mediterranea MMB-1]
gi|326545282|gb|ADZ90502.1| GTP-binding protein engA [Marinomonas mediterranea MMB-1]
Length = 445
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 105/189 (55%), Gaps = 34/189 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P +A+VGRPNVGKS LFNRL A+V D PG+TRDR YG GEH+F+++DTGG+
Sbjct: 1 MIPVIALVGRPNVGKSTLFNRLTKSRDALVADYPGLTRDRKYGDGKLGEHDFIVIDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ + I E +A Q+ AIEE+ ++FLVD
Sbjct: 61 ---TGDEQGIDEKMA---------------------------SQSLQAIEEADAVLFLVD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAIS 340
G+ GL ADE IA+ LR++ K L VNK + + I +++F+S+G L PI+A
Sbjct: 91 GRHGLNPADEMIANHLRRS--SKPTYLVVNKTDGINEDIA-LADFYSVGLGSLYPIAAAH 147
Query: 341 GTGTGELLD 349
G G L+D
Sbjct: 148 GKGVRSLID 156
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 91/195 (46%), Gaps = 38/195 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R+ +VGRPNVGKS L NR++G +R +V D PG TRD +Y + E+ L+DT GV
Sbjct: 181 RIGVVGRPNVGKSTLVNRMLGEDRVVVYDMPGTTRDSVYIPYQRHDKEYTLIDTAGVRR- 239
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K +E +I T+ AI+++ V+I ++D
Sbjct: 240 RKHVKEAVEKFSIVKTL--------------------------QAIQDANVVICVIDAHE 273
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCES----PRKGIMQVSEFWSLGFSPLP----I 336
L D + ++ + +++A+NK + R+ I + E LGF P I
Sbjct: 274 DLVEQDLHMIGYVLD--AGRGLVIAINKWDGMQKDEREHIKKEVE-RRLGFVPYAKVHYI 330
Query: 337 SAISGTGTGELLDLV 351
SA+ GT G+L D +
Sbjct: 331 SALHGTAVGDLYDTI 345
>gi|332291461|ref|YP_004430070.1| ribosome-associated GTPase EngA [Krokinobacter sp. 4H-3-7-5]
gi|332169547|gb|AEE18802.1| ribosome-associated GTPase EngA [Krokinobacter sp. 4H-3-7-5]
Length = 435
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 106/191 (55%), Gaps = 33/191 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS FNRLV AIV GVTRDR YG++ W EF ++DTGG +
Sbjct: 5 VAIVGRPNVGKSTFFNRLVQRREAIVDAVSGVTRDRHYGKTDWNGREFTVIDTGGYV--- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+G + + + I++Q AI+E+ IIF+VD + G
Sbjct: 62 ---------------VGSDDV-----------FEAEIDKQVELAIDEADAIIFMVDVEHG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP-LPISAISGTGT 344
+T DEE+A LR++ K I LAVNK ++ ++ V EF++LG I+A +G+GT
Sbjct: 96 VTGMDEEVAKLLRRS--KKPIFLAVNKVDNNKRAADAV-EFYNLGLGDYYTIAATNGSGT 152
Query: 345 GELLDLVCSEL 355
G+LLD V L
Sbjct: 153 GDLLDAVVEAL 163
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 71/167 (42%), Gaps = 43/167 (25%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LPR A+VGRPN GKS+ N L+G +R IV D G TRD M + EF LVDT G+
Sbjct: 175 LPRFAVVGRPNAGKSSFINALIGEDRYIVTDIAGTTRDAMDTKYNRFGFEFNLVDTAGI- 233
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + + EDL + + ++ AIE + VI+ +VD
Sbjct: 234 ---RRKAKVKEDLEFYSVM-----------------------RSVRAIEHADVILLVVDA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSL 329
G + I WL E RKGI+ + W L
Sbjct: 268 TRGFDGQVQNIF-WL---------------AERNRKGIVILVNKWDL 298
>gi|187478830|ref|YP_786854.1| GTP-binding protein EngA, partial [Bordetella avium 197N]
gi|115423416|emb|CAJ49950.1| GTP-binding protein [Bordetella avium 197N]
Length = 451
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 105/193 (54%), Gaps = 32/193 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFNRL A+V D G+TRDR YG G+ F+++DTGG
Sbjct: 5 PVVALVGRPNVGKSTLFNRLTRSRAALVADYSGLTRDRHYGEGRVGDIPFIVIDTGGFEP 64
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
V+K I+ ++A RQ AI E+ V++FLVD +
Sbjct: 65 VAKD--GILAEMA---------------------------RQTRQAIAEADVVVFLVDAR 95
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
AG+ A D EIA LRK+ + ++LAVNK E +G S+F+ LG P PISA G
Sbjct: 96 AGINAHDHEIARLLRKSGQQR-VLLAVNKAEGMNEG-KATSDFFELGLGEPHPISAAHGD 153
Query: 343 GTGELLDLVCSEL 355
G +L++ ++L
Sbjct: 154 GVVDLIESALADL 166
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 90/196 (45%), Gaps = 40/196 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVGRPNVGKS L N L+G R I D PG TRD + ++ L+DT G+
Sbjct: 186 KLAIVGRPNVGKSTLINTLMGEERVIAFDMPGTTRDAIEIEFERDGRQYTLIDTAGLRKR 245
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K + E ++ T+ AIE S V++ ++D Q+
Sbjct: 246 GKVFEAV-EKFSVIKTL--------------------------QAIEASNVVLLMLDAQS 278
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCES----PRKGIMQVSEFWS----LGFSPL-P 335
++ D IA ++ + + +++A+NK + R+ I + EF L F+ +
Sbjct: 279 EISEQDAHIAGFVLET--GRAVVVAINKWDGLDDDQRERIER--EFQRKLRFLTFARMHT 334
Query: 336 ISAISGTGTGELLDLV 351
ISA+ G G LL V
Sbjct: 335 ISALKGQGIRPLLKSV 350
>gi|405983423|ref|ZP_11041729.1| ribosome-associated GTPase EngA [Slackia piriformis YIT 12062]
gi|404389029|gb|EJZ84110.1| ribosome-associated GTPase EngA [Slackia piriformis YIT 12062]
Length = 437
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/199 (40%), Positives = 106/199 (53%), Gaps = 37/199 (18%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA+VGRPNVGKS NR+ G AIV + GVTRDR Y + W F L+DTGG
Sbjct: 3 LPIVAVVGRPNVGKSTFVNRIAGAQDAIVHEMRGVTRDRSYHEADWNGVHFTLIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I + +A I QA A EE+ I+FLVDG
Sbjct: 61 -----------------------IEMGNEDA----FQKSIRDQAIMATEEADAIVFLVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK--GIMQVSEFWSLGFS-PLPISAI 339
+ G + D E+A L+++ K ++LAVNK ++P K GI EF+SLG P PIS++
Sbjct: 94 KTGSSPDDLEVARILKRS--GKPVMLAVNKMDAPGKEDGIW---EFYSLGLGDPWPISSV 148
Query: 340 SGTGTGELLDLVCSELKKV 358
G GTG+LLD + S +K +
Sbjct: 149 HGHGTGDLLDEIVSHIKDI 167
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 90/195 (46%), Gaps = 39/195 (20%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHE---FMLVDTGGVL 222
VAI+GRPN GKS+L NRL+G +R IV D G TRD + EH+ + +VDT G+
Sbjct: 180 VAIIGRPNAGKSSLTNRLIGRDRTIVSDVAGTTRDAV---DTVVEHDGKLYTIVDTAGL- 235
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + I ED+ + + +A AI+ + V I ++D
Sbjct: 236 ---RKRTKIDEDVEYYSFV-----------------------RAMRAIDRADVAILVIDA 269
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----LGFSP-LPI 336
GLT D+ +A + + +++ + + ++ E + + ++P + I
Sbjct: 270 TLGLTDQDQRVAGFAAERGCAMVVLMNKRDIVESGEALDELRETINDRLVFVNYAPVISI 329
Query: 337 SAISGTGTGELLDLV 351
SA++G G + D V
Sbjct: 330 SALTGKGVLRIWDAV 344
>gi|372325313|ref|ZP_09519902.1| GTP-binding protein EngA [Oenococcus kitaharae DSM 17330]
gi|366984121|gb|EHN59520.1| GTP-binding protein EngA [Oenococcus kitaharae DSM 17330]
Length = 442
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 108/193 (55%), Gaps = 34/193 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+AIVGRPNVGKS LFNR+VG +AIV D GVTRDR+Y ++ W +F L+DTGG+
Sbjct: 7 IAIVGRPNVGKSTLFNRIVGSRKAIVNDISGVTRDRLYEKAEWNGVQFSLIDTGGI---- 62
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+ ED+ + RE I+ QA AI E+ IIF+VDG +
Sbjct: 63 ----SASEDVFV-------------RE---------IKEQAELAIAEADAIIFVVDGHSS 96
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
LT D+ +A L ++ + + L VN ++ + + +F++LG P P+SA+ G G
Sbjct: 97 LTQDDQLVAKILYRS--KQKVYLVVNHLDNAEQHDY-IYDFYALGLGDPYPVSAVHGNGV 153
Query: 345 GELLDLVCSELKK 357
G+LLD + + K+
Sbjct: 154 GDLLDQIIDDFKQ 166
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 81/164 (49%), Gaps = 32/164 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
R+AI+GRPNVGKS++FN L+ NRAIV D G TRD + + F + F + DT G+
Sbjct: 182 RIAIIGRPNVGKSSIFNDLIQQNRAIVSDIQGTTRDAVDAQ-FQDDQGQRFTITDTAGIR 240
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K I+E +T + AV R A A+E++ V++ ++D
Sbjct: 241 KSGK----IIE---------------STEKYAVLR--------AQMAVEDADVVLVVIDA 273
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
AG+ D+ IA + +I+ VNK ++ K + EF
Sbjct: 274 SAGIQDQDKHIAGLATDE--GRAVIIVVNKWDAIEKDDHSMQEF 315
>gi|170694783|ref|ZP_02885934.1| small GTP-binding protein [Burkholderia graminis C4D1M]
gi|170140414|gb|EDT08591.1| small GTP-binding protein [Burkholderia graminis C4D1M]
Length = 445
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 102/189 (53%), Gaps = 33/189 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+ P +A+VGRPNVGKS LFNRL A+V D PG+TRDR YG GE +++VDTGG
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRTGERPYLVVDTGGF 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
V+K I+ ++A RQ A+EES +++F+VD
Sbjct: 61 EPVAKD--GILHEMA---------------------------RQTRQAVEESDIVVFIVD 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ GL D+ IAD+LRK + I L VNK E + + ++F+ LG P ISA
Sbjct: 92 GRNGLAPQDKSIADYLRKT--GRPIFLVVNKAEGMKYSTV-AADFYELGLGDPRAISAAH 148
Query: 341 GTGTGELLD 349
G G E+++
Sbjct: 149 GDGVTEMIN 157
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 69/151 (45%), Gaps = 29/151 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVGRPNVGKS L N LVG R I D PG TRD +Y + L+DT G+
Sbjct: 181 KIAIVGRPNVGKSTLINALVGEERVIAFDMPGTTRDSIYVDFERQGKPYTLIDTAGLRRR 240
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K I E ++ T+ +I ++ V+I L+D +
Sbjct: 241 GKVFEAI-EKFSVVKTL--------------------------QSISDANVVILLLDARQ 273
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCES 315
++ D IA ++ + + +++ VNK +
Sbjct: 274 DISEQDAHIAGFVVEQ--GRALVVGVNKWDG 302
>gi|397690884|ref|YP_006528138.1| small GTP-binding protein [Melioribacter roseus P3M]
gi|395812376|gb|AFN75125.1| small GTP-binding protein [Melioribacter roseus P3M]
Length = 437
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 107/193 (55%), Gaps = 33/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P + IVGRPNVGKS LFNRL +IV D PGVTRDR+YG + W +F ++DTGG++
Sbjct: 4 PVIVIVGRPNVGKSTLFNRLTRSKTSIVDDAPGVTRDRIYGEAEWNGKKFRVIDTGGLV- 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
PN +DL EAA I+ Q A +E+ I F+VDG+
Sbjct: 63 -----PN-SQDLF---------------EAA-------IKEQVEIAFQEADAIFFVVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGT 342
+GLT D EIA LRK F L VNK +SP I++ ++F+ LG + ISAI+G
Sbjct: 95 SGLTPLDIEIAQNLRKFTKPNF--LLVNKADSPELEIIK-NDFYRLGIEKIYDISAINGR 151
Query: 343 GTGELLDLVCSEL 355
G+LLD + L
Sbjct: 152 NLGDLLDDLIESL 164
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 40/199 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R++I+G+PNVGKS+L N L+G +R+IV D PG TRD + + E +LVDT G+
Sbjct: 178 RLSIIGKPNVGKSSLVNSLLGYDRSIVTDIPGTTRDSIDSVLKYYGQEIILVDTAGLRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK I E++ + + + A+ S V + L+D Q
Sbjct: 238 SK----IKENVEFFSNV-----------------------RTFKALWNSDVAVLLIDAQL 270
Query: 285 GLTAADEE-IADWLRKNYMDKFIILAVNKCESPRKGIMQVS--------EFWSLGFSP-L 334
G+ D+ I + +R+ K +I+A+NK + K E +L + P +
Sbjct: 271 GIENQDQRIIQEAVRRR---KGLIIAINKWDLIAKDTNTAKVFEEAVRRELGTLDYVPVI 327
Query: 335 PISAISGTGTGELLDLVCS 353
ISA++ +L+DL
Sbjct: 328 TISALTKQRIYKLIDLALK 346
>gi|421074409|ref|ZP_15535441.1| GTP-binding protein engA [Pelosinus fermentans JBW45]
gi|392527450|gb|EIW50544.1| GTP-binding protein engA [Pelosinus fermentans JBW45]
Length = 440
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/199 (38%), Positives = 110/199 (55%), Gaps = 33/199 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS LFN + +IV + PGVTRDR+Y + W + EF ++DTGG+
Sbjct: 4 PILAIVGRPNVGKSTLFNYIGQKRVSIVENIPGVTRDRIYLDAEWLDREFTMIDTGGI-E 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ S +M + + QA AI+E+ I+F+VDG+
Sbjct: 63 IESSD----------------------------KMLTAMRYQAKLAIDEADAILFIVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT+ADEE+A LR K +I+AVNK ++ +K ++ EF++LG P+ ISA +
Sbjct: 95 VGLTSADEEVAIILRNTR--KPVIVAVNKVDNMQKA-NEIYEFYNLGLGDPIAISAANAL 151
Query: 343 GTGELLDLVCSELKKVEVC 361
G+LLD V L EV
Sbjct: 152 NIGDLLDEVVKRLPNDEVV 170
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 65/132 (49%), Gaps = 27/132 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VA++GRPNVGKS+L NRLVG R IV D G TRD + + F+L+DT G+
Sbjct: 178 KVAVIGRPNVGKSSLVNRLVGEERVIVSDVAGTTRDAIDTHFTKDDTSFVLIDTAGMRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+K E V R M +A A++ S V++ ++D
Sbjct: 238 AKV------------------------ELPVERYSVM---RALRAVDRSDVVLIVIDAVD 270
Query: 285 GLTAADEEIADW 296
G+T D++IA +
Sbjct: 271 GVTEQDKKIAGY 282
>gi|392960765|ref|ZP_10326230.1| GTP-binding protein engA [Pelosinus fermentans DSM 17108]
gi|421054477|ref|ZP_15517445.1| ribosome-associated GTPase EngA [Pelosinus fermentans B4]
gi|421057821|ref|ZP_15520586.1| GTP-binding protein engA [Pelosinus fermentans B3]
gi|421067194|ref|ZP_15528699.1| GTP-binding protein engA [Pelosinus fermentans A12]
gi|421071339|ref|ZP_15532459.1| GTP-binding protein engA [Pelosinus fermentans A11]
gi|392440835|gb|EIW18495.1| ribosome-associated GTPase EngA [Pelosinus fermentans B4]
gi|392447255|gb|EIW24509.1| GTP-binding protein engA [Pelosinus fermentans A11]
gi|392450622|gb|EIW27654.1| GTP-binding protein engA [Pelosinus fermentans A12]
gi|392454662|gb|EIW31484.1| GTP-binding protein engA [Pelosinus fermentans DSM 17108]
gi|392462100|gb|EIW38218.1| GTP-binding protein engA [Pelosinus fermentans B3]
Length = 440
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/199 (38%), Positives = 110/199 (55%), Gaps = 33/199 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS LFN + +IV + PGVTRDR+Y + W + EF ++DTGG+
Sbjct: 4 PILAIVGRPNVGKSTLFNYIGQKRVSIVENIPGVTRDRIYLDAEWLDREFTMIDTGGI-E 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ S +M + + QA AI+E+ I+F+VDG+
Sbjct: 63 IESSD----------------------------KMLTAMRYQAKLAIDEADAILFIVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT+ADEE+A LR K +I+AVNK ++ +K ++ EF++LG P+ ISA +
Sbjct: 95 VGLTSADEEVAIILRNTR--KPVIVAVNKVDNMQKA-NEIYEFYNLGLGDPIAISAANAL 151
Query: 343 GTGELLDLVCSELKKVEVC 361
G+LLD V L EV
Sbjct: 152 NIGDLLDEVVKRLPNDEVV 170
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 65/132 (49%), Gaps = 27/132 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VA++GRPNVGKS+L NRLVG R IV D G TRD + + F+L+DT G+
Sbjct: 178 KVAVIGRPNVGKSSLVNRLVGEERVIVSDVAGTTRDAIDTHFTKDDTSFVLIDTAGMRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+K E V R M +A A++ S V++ ++D
Sbjct: 238 AKV------------------------ELPVERYSVM---RALRAVDRSDVVLIVIDAVD 270
Query: 285 GLTAADEEIADW 296
G+T D++IA +
Sbjct: 271 GVTEQDKKIAGY 282
>gi|392969404|ref|ZP_10334819.1| ribosome-associated GTPase EngA [Fibrisoma limi BUZ 3]
gi|387841598|emb|CCH56877.1| ribosome-associated GTPase EngA [Fibrisoma limi BUZ 3]
Length = 435
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 104/192 (54%), Gaps = 33/192 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRL +AI+ ++ GVTRDR YG + W + F ++DTGG +
Sbjct: 5 VAIVGRPNVGKSTLFNRLTEQRQAIMDNQSGVTRDRHYGYAEWTDKRFTVIDTGGYV--- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+G E I I Q AIEE+ V++F+VD G
Sbjct: 62 ---------------VGSEDI-----------FEGAIREQVEIAIEEATVLLFVVDTMTG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
LT D++ A+ LR++ K + + NK E+ + SEF++LG P PIS+ +G+GT
Sbjct: 96 LTGLDQDFANVLRRS--KKPVYVVANKAETFDRQ-QAASEFYALGLGDPHPISSQTGSGT 152
Query: 345 GELLDLVCSELK 356
G+LLD V +
Sbjct: 153 GDLLDEVVKHFQ 164
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 76/160 (47%), Gaps = 29/160 (18%)
Query: 159 PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDT 218
PE +PR+AI+GRPNVGKS+ N L G R+IV D G TRD + R +F+L DT
Sbjct: 171 PEAGIPRIAILGRPNVGKSSFLNVLTGRERSIVTDIAGTTRDAINTRYKAYGKDFILTDT 230
Query: 219 GGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIF 278
G+ ++ Q NI E +I +I A+EES V I
Sbjct: 231 AGIRRKARIQDNI-EFYSILRSI--------------------------KAMEESDVCIV 263
Query: 279 LVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
++D GL A D I + K +++ VNK ++ K
Sbjct: 264 MLDATRGLEAQDLNIIGQAVR--AKKGVVIMVNKWDAVEK 301
>gi|378835568|ref|YP_005204844.1| GTP-binding protein engA [Mycoplasma hyorhinis GDL-1]
gi|385858455|ref|YP_005904966.1| GTP-binding protein Der [Mycoplasma hyorhinis MCLD]
gi|423262630|ref|YP_007012655.1| GTP-binding protein EngA [Mycoplasma hyorhinis SK76]
gi|330723544|gb|AEC45914.1| GTP-binding protein Der [Mycoplasma hyorhinis MCLD]
gi|367460353|gb|AEX13876.1| GTP-binding protein engA [Mycoplasma hyorhinis GDL-1]
gi|422035167|gb|AFX74009.1| GTP-binding protein EngA [Mycoplasma hyorhinis SK76]
Length = 433
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/185 (40%), Positives = 102/185 (55%), Gaps = 36/185 (19%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VA++G+PNVGKS LFN+LVG +I+ D PGVTRDR+Y + W EF L+DTGG+ +
Sbjct: 5 VALIGKPNVGKSTLFNKLVGKKVSIIHDSPGVTRDRIYSKVEWAGKEFYLIDTGGIEIEN 64
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
KS E + I T I AIEE+ +IIFLVDG+
Sbjct: 65 KS---FQEQIRIQTQI---------------------------AIEEANLIIFLVDGRVE 94
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGTGT 344
+ + D + D LRK+ K +++A NK E + + +SLGF + PISAI G G
Sbjct: 95 IDSDDHFVIDLLRKS--SKKVLIAANKLEGNK---FFDTSIYSLGFEHIFPISAIHGEGV 149
Query: 345 GELLD 349
G+LLD
Sbjct: 150 GDLLD 154
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 38/62 (61%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R+AI+G+PN GKS L N+L NR+IV G TRD + + +F ++DT G++
Sbjct: 172 RLAIIGKPNAGKSTLLNKLANENRSIVSPIAGTTRDSVSSFIKIDKIDFEIIDTAGIIRK 231
Query: 225 SK 226
SK
Sbjct: 232 SK 233
>gi|317506861|ref|ZP_07964633.1| ribosome-associated GTPase EngA [Segniliparus rugosus ATCC BAA-974]
gi|316254789|gb|EFV14087.1| ribosome-associated GTPase EngA [Segniliparus rugosus ATCC BAA-974]
Length = 449
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/207 (39%), Positives = 108/207 (52%), Gaps = 34/207 (16%)
Query: 156 GNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFML 215
G PE LP VA+VGRPNVGKS L NR VG A+V D PGVTRDR+ + WG F++
Sbjct: 3 GQKPEQRLPVVAVVGRPNVGKSTLVNRFVGRRAAVVEDVPGVTRDRVSYDAEWGGRSFLV 62
Query: 216 VDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCV 275
DTGG +P+ T IG+ I +QA A+ + V
Sbjct: 63 QDTGG------WEPD-------ATGIGLS-----------------IAQQAELAMATADV 92
Query: 276 IIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PL 334
I+ +VD QAG T DE +A LR++ K + L NK ++P+ + S WSLG P
Sbjct: 93 ILLVVDAQAGPTGVDEALAKSLRRS--KKPVFLVANKSDNPQIE-DESSGLWSLGLGRPY 149
Query: 335 PISAISGTGTGELLDLVCSELKKVEVC 361
P+SA+ G G+G+LLD + V V
Sbjct: 150 PVSALHGKGSGDLLDAALESVPAVLVA 176
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 72/160 (45%), Gaps = 32/160 (20%)
Query: 158 VPEHLLPR---VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFM 214
V EH PR VA+VGRPNVGKS+L N+L G R++V + G T D + + E+
Sbjct: 175 VAEHEGPRPRRVALVGRPNVGKSSLINKLAGETRSVVNEMAGTTVDPVDSIITLDDEEWQ 234
Query: 215 LVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESC 274
VDT G+ + G E AAV + +AIE +
Sbjct: 235 FVDTAGLRR------------KVGHASGHEFY------AAV---------RTKSAIEAAE 267
Query: 275 VIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
V+I L+D LT D+ I + + ++LA NK +
Sbjct: 268 VVIVLIDASVPLTEQDQRIFGMV--GEAGRAMVLACNKWD 305
>gi|305666364|ref|YP_003862651.1| GTP-binding protein EngA [Maribacter sp. HTCC2170]
gi|88708356|gb|EAR00593.1| GTP-binding protein EngA [Maribacter sp. HTCC2170]
Length = 496
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 106/191 (55%), Gaps = 33/191 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS FNRL+ AIV GVTRDR YG+S W EF ++DTGG +
Sbjct: 67 VAIVGRPNVGKSTFFNRLIQRREAIVDAVSGVTRDRHYGKSDWNGKEFSIIDTGGYV--- 123
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+G + I I++Q AIEE+ +IF+VD + G
Sbjct: 124 ---------------VGSDDI-----------FEQEIDKQVELAIEEADALIFMVDVETG 157
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP-LPISAISGTGT 344
+T DE++A L K ++K + LAVNK ++ ++ V EF+SLG +S+I+G+GT
Sbjct: 158 VTGMDEDVAKILHK--VNKPVFLAVNKVDNAKRAEDAV-EFYSLGLGEYYNLSSINGSGT 214
Query: 345 GELLDLVCSEL 355
GELLD + L
Sbjct: 215 GELLDALVEML 225
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 69/152 (45%), Gaps = 29/152 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LPR A+VGRPN GKS+ N L+G R IV D G TRD + + EF LVDT G+
Sbjct: 235 LPRFAVVGRPNAGKSSFINALIGEERYIVTDIAGTTRDSIDTKYNRFGFEFNLVDTAGIR 294
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
SK + EDL + + ++ AIE S V + L+D
Sbjct: 295 RKSK----VKEDLEFYSVM-----------------------RSVRAIEHSDVCLLLLDA 327
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
G I WL + +K I++ VNK +
Sbjct: 328 TRGFDGQVSNIF-WLAQR-NNKGIVILVNKWD 357
>gi|304372871|ref|YP_003856080.1| GTPase protein [Mycoplasma hyorhinis HUB-1]
gi|304309062|gb|ADM21542.1| putative GTPase protein [Mycoplasma hyorhinis HUB-1]
Length = 433
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/185 (40%), Positives = 102/185 (55%), Gaps = 36/185 (19%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VA++G+PNVGKS LFN+LVG +I+ D PGVTRDR+Y + W EF L+DTGG+ +
Sbjct: 5 VALIGKPNVGKSTLFNKLVGKKVSIIHDSPGVTRDRIYSKVEWAGKEFYLIDTGGIEIEN 64
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
KS E + I T I AIEE+ +IIFLVDG+
Sbjct: 65 KS---FQEQIRIQTQI---------------------------AIEEANLIIFLVDGRVE 94
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGTGT 344
+ + D + D LRK+ K +++A NK E + + +SLGF + PISAI G G
Sbjct: 95 IDSDDHFVIDLLRKS--SKKVLIAANKLEGNK---FFDTSIYSLGFEHIFPISAIHGEGV 149
Query: 345 GELLD 349
G+LLD
Sbjct: 150 GDLLD 154
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 38/62 (61%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R+AI+G+PN GKS L N+L NR+IV G TRD + + +F ++DT G++
Sbjct: 172 RLAIIGKPNAGKSTLLNKLANENRSIVSPIAGTTRDSVSSFIKIDKIDFEIIDTAGIIRK 231
Query: 225 SK 226
SK
Sbjct: 232 SK 233
>gi|307729253|ref|YP_003906477.1| ribosome-associated GTPase EngA [Burkholderia sp. CCGE1003]
gi|307583788|gb|ADN57186.1| ribosome-associated GTPase EngA [Burkholderia sp. CCGE1003]
Length = 445
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 102/189 (53%), Gaps = 33/189 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+ P +A+VGRPNVGKS LFNRL A+V D PG+TRDR YG GE +++VDTGG
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRTGERPYLVVDTGGF 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
V+K I+ ++A RQ A+EES +++F+VD
Sbjct: 61 EPVAKD--GILHEMA---------------------------RQTRQAVEESDIVVFIVD 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ GL D+ IAD+LRK + I L VNK E + + ++F+ LG P ISA
Sbjct: 92 GRNGLAPQDKSIADYLRKT--GRPIFLVVNKAEGMKYSAV-AADFYELGLGDPRAISAAH 148
Query: 341 GTGTGELLD 349
G G E+++
Sbjct: 149 GDGVTEMIN 157
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 69/151 (45%), Gaps = 29/151 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVGRPNVGKS L N LVG R I D PG TRD +Y + L+DT G+
Sbjct: 181 KIAIVGRPNVGKSTLINALVGEERVIAFDMPGTTRDSIYVDFERQGKPYTLIDTAGLRRR 240
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K I E ++ T+ +I ++ V+I L+D +
Sbjct: 241 GKVFEAI-EKFSVVKTL--------------------------QSISDANVVILLLDARQ 273
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCES 315
++ D IA ++ + + +++ VNK +
Sbjct: 274 DISEQDAHIAGFVVEQ--GRALVVGVNKWDG 302
>gi|221504233|gb|EEE29908.1| GTPase mss1/trme, putative [Toxoplasma gondii VEG]
Length = 1151
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/283 (33%), Positives = 129/283 (45%), Gaps = 46/283 (16%)
Query: 73 SSSNDDAFEDSPFEDEDDDAEYEDVDDESDGQDFGIDVDALEREA-KDAVREYSSLLSRQ 131
+S+ D + FE ED+D +VD D D DV ER K+ R+
Sbjct: 571 TSAGDKGDKARRFEPEDED----EVDSNQDEGDLLYDVRQAERTPDKELTRDTEEETGSS 626
Query: 132 LIIQDETDDRKDSGKKQKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLV----GGN 187
+ + + S K ++ E +P V ++GRPNVGKS+LFN L
Sbjct: 627 GVAFRLSTPHRSSQKLVRR---------EGRVPCVCLLGRPNVGKSSLFNTLKDKEDAAA 677
Query: 188 RAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIP 247
AIV DE G TRDR Y S W F++VDTGG++ ED
Sbjct: 678 DAIVRDEDGTTRDRHYAFSVWRGRPFIVVDTGGLI--------FEED------------- 716
Query: 248 LATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFII 307
A A I Q A+EE+ IF+VDG+ GL DE IA +LR++ ++
Sbjct: 717 ----RYAAALYAEEIRTQVKCALEEATCAIFVVDGRHGLDGEDEVIAHFLRRSKTP--VV 770
Query: 308 LAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGTGTGELLD 349
+ VNK E+ R GI +FW LG P P SA+ G G +LLD
Sbjct: 771 VCVNKTENVRSGIASAQDFWKLGLGQPFPCSAVEGVGLPDLLD 813
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV--LN 223
VAIVGRPNVGKS L NRL+G +R++V + G TRD + + LVDT G+
Sbjct: 877 VAIVGRPNVGKSQLLNRLLGVSRSLVSPQAGTTRDAVDELVQRDGRLYRLVDTAGIRRAR 936
Query: 224 VSKSQPNI 231
V K+Q +
Sbjct: 937 VVKAQKGV 944
>gi|167587055|ref|ZP_02379443.1| GTP-binding protein EngA [Burkholderia ubonensis Bu]
Length = 445
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 101/189 (53%), Gaps = 33/189 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+ P +A+VGRPNVGKS LFNRL A+V D PG+TRDR YG GE +++VDTGG
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPYLVVDTGGF 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
V+K I+ ++A RQ A+EE+ V++F+VD
Sbjct: 61 EPVAKD--GILHEMA---------------------------RQTRQAVEEADVVVFIVD 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ GL D+ IAD+LRK + I L VNK E K S+F+ LG P ISA
Sbjct: 92 GRNGLAPQDKSIADYLRKT--GRPIFLVVNKSEG-MKYTAVASDFYELGLGDPRAISAAH 148
Query: 341 GTGTGELLD 349
G G E+++
Sbjct: 149 GDGVTEMIN 157
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 85/197 (43%), Gaps = 48/197 (24%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVGRPNVGKS L N L+G +R I D PG TRD +Y + L+DT G+
Sbjct: 181 KIAIVGRPNVGKSTLVNTLIGEDRVIAFDMPGTTRDSIYVDFERNGKPYTLIDTAGLRRR 240
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K I E ++ T+ +I ++ V+I L+D +
Sbjct: 241 GKVFEAI-EKFSVVKTL--------------------------QSIADANVVILLLDARQ 273
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCES-------------PRKGIMQVSEFWSLGF 331
++ D IA ++ + + +++ VNK + RK ++ EF F
Sbjct: 274 DISDQDAHIAGFVVEQ--GRALVVGVNKWDGLDPHVRERTKADLTRK--LKFLEFAKFHF 329
Query: 332 SPLPISAISGTGTGELL 348
ISA TG G L+
Sbjct: 330 ----ISAAEKTGIGPLM 342
>gi|262341130|ref|YP_003283985.1| GTP-binding protein EngA [Blattabacterium sp. (Blattella germanica)
str. Bge]
gi|262272467|gb|ACY40375.1| GTP-binding protein EngA [Blattabacterium sp. (Blattella germanica)
str. Bge]
Length = 443
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 107/193 (55%), Gaps = 34/193 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
V+IVGRPNVGKS FNRLVG +AIV GVTRDR++G S W +F +VDTG
Sbjct: 5 VSIVGRPNVGKSTFFNRLVGRRKAIVHITSGVTRDRIFGNSEWNGVKFSVVDTG------ 58
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
G AT E V + I+ Q AI+E+ VI+FLVD + G
Sbjct: 59 -------------------GFSFATSENDV--LEKEIKNQIFIAIKEADVILFLVDIKMG 97
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV-SEFWSLGF-SPLPISAISGTG 343
+ D EIA LRK+ K +L VNK ++ GI+ ++F+ LGF + ISAI+G+G
Sbjct: 98 VLDTDREIAKILRKS--QKITLLVVNKVDN---GILYSDTDFFHLGFENCYYISAINGSG 152
Query: 344 TGELLDLVCSELK 356
TGELLD + K
Sbjct: 153 TGELLDKLVEIFK 165
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 75/170 (44%), Gaps = 39/170 (22%)
Query: 148 QKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRM---YG 204
QKK K + + LPR ++VGRPNVGKS L N + N IV G TRD + Y
Sbjct: 170 QKKEKI----INKEFLPRFSVVGRPNVGKSTLINSFLDKNHHIVTHISGTTRDSLDVFYK 225
Query: 205 RSFWGEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIER 264
+ WG +E +LVDT GV SK + NI +I T
Sbjct: 226 K--WG-YECILVDTPGVRKKSKIRENIEFYSSIRT------------------------- 257
Query: 265 QATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
IE + V + +VD G D I ++ N+ K II+ VNK +
Sbjct: 258 --VRTIEYTDVCLLMVDAVRGWEKQDTNIFRLVKTNH--KGIIILVNKWD 303
>gi|444335632|ref|YP_007392001.1| GTP-binding protein EngA [Blattabacterium sp. (Blatta orientalis)
str. Tarazona]
gi|444300011|gb|AGD98248.1| GTP-binding protein EngA [Blattabacterium sp. (Blatta orientalis)
str. Tarazona]
Length = 439
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/192 (42%), Positives = 107/192 (55%), Gaps = 33/192 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
V+IVGRPNVGKS LFNR VG +AIV GVTRDR+YG S W F LVDTGG +
Sbjct: 5 VSIVGRPNVGKSTLFNRFVGRMKAIVHVRSGVTRDRIYGESEWNGVHFSLVDTGGYNPIH 64
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
K N+++ + I +Q AI+E+ VI+FLVD + G
Sbjct: 65 K---NLLD--------------------------AEIIKQILIAIKEADVILFLVDIKIG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP-LPISAISGTGT 344
+ D EI+ LRK K I+L VNK ++ K + ++F+ LGF ISAI+G+GT
Sbjct: 96 ILDIDVEISQLLRK--YKKSILLVVNKVDNG-KYMYHNTDFFCLGFRDYYYISAINGSGT 152
Query: 345 GELLDLVCSELK 356
GELLD + LK
Sbjct: 153 GELLDRLIEILK 164
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 72/162 (44%), Gaps = 29/162 (17%)
Query: 158 VPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVD 217
V + +LPR +++GRPNVGKS L N + N IV + G TRD + ++ +LVD
Sbjct: 172 VEKEVLPRFSVIGRPNVGKSTLINSFLEKNHHIVTNVSGTTRDSLDVSYKKFGYKCILVD 231
Query: 218 TGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVII 277
T GV SK I E L +T+ + +IE + + +
Sbjct: 232 TPGVRKKSK----ISESLEFYSTM-----------------------RTVRSIESTDICL 264
Query: 278 FLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKG 319
+VD G + D I + +N K II+ +NK + G
Sbjct: 265 LMVDAVRGWESQDRNIFRLVERN--QKGIIILINKWDLLNHG 304
>gi|345885001|ref|ZP_08836395.1| GTP-binding protein engA [Prevotella sp. C561]
gi|345042150|gb|EGW46257.1| GTP-binding protein engA [Prevotella sp. C561]
Length = 437
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 104/192 (54%), Gaps = 33/192 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRL AIV D G TRDR YG+ W EF +VDTGG V
Sbjct: 5 VAIVGRPNVGKSTLFNRLTQTRHAIVSDTAGTTRDRQYGKCQWNGREFSVVDTGGW--VV 62
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
KS +I ED I +Q A EE+ +++F+VD + G
Sbjct: 63 KSD-DIFED--------------------------AIRKQVLVATEEADLVLFVVDTETG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+T DE++A LR+ + ++L NK ++ + Q +EF+ LG P+ ISA +G GT
Sbjct: 96 ITDWDEDVALILRRTKLP--VLLVANKVDNSGE-YYQAAEFYKLGLGDPICISAATGGGT 152
Query: 345 GELLDLVCSELK 356
G+LLD + LK
Sbjct: 153 GDLLDTLLENLK 164
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 29/152 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
+PR A+VGRPN GKS+L N +G +R IV + G TRD +Y R +F LVDT G+
Sbjct: 175 IPRFAVVGRPNAGKSSLINAFIGEDRNIVTEIAGTTRDSIYTRYTKFGFDFYLVDTAGI- 233
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + + EDL + + ++ +IE + V I ++D
Sbjct: 234 ---RRKNKVTEDLEFYSVM-----------------------RSIRSIENADVCILMLDA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
G+ + D I +++N +K +++ VNK +
Sbjct: 268 TRGIESQDMNIFQLIQRN--NKSLVVVVNKWD 297
>gi|365840247|ref|ZP_09381447.1| ribosome biogenesis GTPase Der [Anaeroglobus geminatus F0357]
gi|364562037|gb|EHM39908.1| ribosome biogenesis GTPase Der [Anaeroglobus geminatus F0357]
Length = 360
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/198 (39%), Positives = 107/198 (54%), Gaps = 32/198 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN +V +IV D PGVTRDR+Y + W EF L+DTGG+
Sbjct: 4 PLVAVVGRPNVGKSTLFNAIVKKRVSIVEDIPGVTRDRIYFDAEWLGREFTLIDTGGIEF 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
V K R+ + + QA AI E+ VI+++VDG+
Sbjct: 64 VDKDN----------------------------RIFTSMRYQAELAIREADVILYVVDGK 95
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+ D EIA LR + K +IL VNK +S + M + EF+ LG P+ +SA++
Sbjct: 96 TGIQPQDREIASLLRSS--GKPVILVVNKIDSVEQE-MNIYEFYGLGLGDPVGVSAVNLM 152
Query: 343 GTGELLDLVCSELKKVEV 360
G+LLD V +K+V V
Sbjct: 153 NLGDLLDEVLKNIKEVPV 170
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 71/149 (47%), Gaps = 29/149 (19%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VA+VGRPNVGKS+L N L+G R IV D G TRD + EF+L+DT G+
Sbjct: 180 VALVGRPNVGKSSLTNALLGKERVIVSDMAGTTRDSIDTHWRHDGTEFVLIDTAGMRRKG 239
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
K I L +V R A AI+ S V + ++DG G
Sbjct: 240 K-------------------IDLPVERYSVVR--------ALRAIDRSDVAVLVLDGTEG 272
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCE 314
+T D++IA ++ + K I+ VNK +
Sbjct: 273 VTEQDKKIAGYIHE--AGKGCIIIVNKWD 299
>gi|114319757|ref|YP_741440.1| GTP-binding protein EngA [Alkalilimnicola ehrlichii MLHE-1]
gi|122312352|sp|Q0AB37.1|DER_ALHEH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|114226151|gb|ABI55950.1| small GTP-binding protein [Alkalilimnicola ehrlichii MLHE-1]
Length = 467
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/196 (41%), Positives = 107/196 (54%), Gaps = 40/196 (20%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +A+VGRPNVGKS LFN+L A+V D PG+TRDR YG GE +++VDTGG+
Sbjct: 3 PVIALVGRPNVGKSTLFNQLTRSRDALVADHPGLTRDRQYGVGKVGERPYIVVDTGGL-- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
P +E GM +QA AAIEE+ I+FLVDG+
Sbjct: 61 --GDDPEGVEQ-------GM-------------------HQQALAAIEEADAILFLVDGR 92
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFS-PLPISAI 339
+G TAADEE+A LR+ K + L VNK + G+ + +EF +LG PLPI+A
Sbjct: 93 SGPTAADEELAAHLRRQ--GKPVWLVVNKTD----GVDHRLATAEFHALGLGEPLPIAAA 146
Query: 340 SGTGTGELLDLVCSEL 355
G G L+D V + L
Sbjct: 147 HGRGIAGLMDHVLAGL 162
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 92/200 (46%), Gaps = 38/200 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R+AIVGRPNVGKS L NRL+G R +V D PG TRD ++ + L+DT G+
Sbjct: 183 RIAIVGRPNVGKSTLVNRLLGEERVLVYDMPGTTRDSVFIPLERDGRPYTLIDTAGMRRR 242
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
++ + E ++ T+ A+E + V+I ++D +
Sbjct: 243 ARVHETV-EKFSVIQTL--------------------------KAMEAAHVVILVIDARE 275
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKC--------ESPRKGIMQVSEFWSLGFSPLPI 336
G+T D + + ++ + ++LA+NK E+ + G+ + F + I
Sbjct: 276 GVTDQDTHLIGHVLES--GRALVLAINKWDGLTAEQREAVKAGLERKLTFLNFARRHF-I 332
Query: 337 SAISGTGTGELLDLVCSELK 356
SA+ G+G G L V L+
Sbjct: 333 SALHGSGVGLLFGAVDKALE 352
>gi|124008576|ref|ZP_01693268.1| GTP-binding protein EngA [Microscilla marina ATCC 23134]
gi|123985950|gb|EAY25807.1| GTP-binding protein EngA [Microscilla marina ATCC 23134]
Length = 436
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 106/196 (54%), Gaps = 34/196 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRL+ ++I+ ++ GVTRDR+YG++ W F ++DTGG +
Sbjct: 5 VAIVGRPNVGKSTLFNRLIEQRKSIMDNQSGVTRDRVYGQAEWIGKFFTVIDTGGYV--- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+G E + I Q AIEES V++F+VD G
Sbjct: 62 ---------------VGSEDV-----------FEGAIREQVEIAIEESSVVLFVVDCITG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP--LPISAISGTG 343
LT D++ A+ LR+ K +I+ NK ++ K M SEF+ LG PISA SG+G
Sbjct: 96 LTDLDKDFANVLRRG--SKPVIIVANKADNIEKEYM-ASEFYQLGLEGDIFPISAQSGSG 152
Query: 344 TGELLDLVCSELKKVE 359
+G+LLD V VE
Sbjct: 153 SGDLLDEVVKHFDDVE 168
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 73/168 (43%), Gaps = 29/168 (17%)
Query: 159 PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDT 218
P +P++AIVGRPN GKS+L N L G R+IV D G TRD + F+L DT
Sbjct: 172 PYAGIPKIAIVGRPNAGKSSLVNVLTGKERSIVTDIAGTTRDSVNTHYKAFGKNFILTDT 231
Query: 219 GGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIF 278
G+ S+ + NI +T+ +A ++E S + I
Sbjct: 232 AGLRRKSRVKDNI----EFYSTM-----------------------RALRSLEASDICIV 264
Query: 279 LVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
+VD G+ D I KN K I++ VNK + K +F
Sbjct: 265 MVDATRGIEGQDVNIIGLADKN--GKGIVIMVNKWDLIEKDTKTAEKF 310
>gi|39938726|ref|NP_950492.1| hypothetical protein PAM_240 [Onion yellows phytoplasma OY-M]
gi|39721835|dbj|BAD04325.1| conserved hypothetical protein [Onion yellows phytoplasma OY-M]
Length = 478
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 103/189 (54%), Gaps = 34/189 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVGRPNVGKS+LFNR++G AI + G+TRDR+Y + W F ++DTGG+
Sbjct: 4 KIAIVGRPNVGKSSLFNRIIGRRHAITHQKAGITRDRIYATAEWFTKTFGVIDTGGI--- 60
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
I +T +E I L QA A++E+ VI+F+VDGQ
Sbjct: 61 -----------EIQSTPFLEQIKL----------------QAQLAVDEADVIVFVVDGQT 93
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGTG 343
GLT D +A L K K ++LAVNK ++ + EF++LGF +P IS G G
Sbjct: 94 GLTQNDIYLAKLLYKT--KKPVLLAVNKIDN-HNLLSNTYEFYALGFDTPFAISTQHGIG 150
Query: 344 TGELLDLVC 352
G+LLD +
Sbjct: 151 IGDLLDKIV 159
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 74/164 (45%), Gaps = 33/164 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
+ +VGRPNVGKS L N L+ R IV D G T D + +F+ ++ ++DT G+
Sbjct: 216 KFCVVGRPNVGKSTLTNSLLASQRMIVSDMAGTTTDAV--DTFFENDGQKYQIIDTAGI- 272
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K + I E + +V R A A+E++ + ++D
Sbjct: 273 ---KKRGKIYEQ---------------EDKYSVLR--------ALGALEKADIACLVLDA 306
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
+ G+ D+ IA ++ +++ K I+ VNK + K + F
Sbjct: 307 KEGILEQDKNIAGFILEHH--KACIIIVNKWDLLEKDTNTLKNF 348
>gi|323342077|ref|ZP_08082310.1| ribosome-associated GTPase EngA [Erysipelothrix rhusiopathiae ATCC
19414]
gi|336066190|ref|YP_004561048.1| GTP-binding protein EngA [Erysipelothrix rhusiopathiae str.
Fujisawa]
gi|322464502|gb|EFY09695.1| ribosome-associated GTPase EngA [Erysipelothrix rhusiopathiae ATCC
19414]
gi|334296136|dbj|BAK32007.1| GTP-binding protein EngA [Erysipelothrix rhusiopathiae str.
Fujisawa]
Length = 436
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/191 (38%), Positives = 105/191 (54%), Gaps = 34/191 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS+LFNR++G +IV DE GVTRDR+YG++ W + +DTGG
Sbjct: 6 VAIVGRPNVGKSSLFNRIMGERISIVHDEAGVTRDRLYGKTTWLTKDLRFIDTGG----- 60
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
I MEG P I+ Q AI+E+ +I+F+V + G
Sbjct: 61 ---------------IQMEGQPFQEE----------IKMQVDIAIDEADIILFVVSAKEG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGTGT 344
+T DE IA LR+ +K +I+A NK + + + + EF++LG+ P +S G G
Sbjct: 96 MTTDDEFIARLLRQT--NKPVIIAANKVDDV-QFVSDIYEFYALGYDEPFAVSCEHGIGL 152
Query: 345 GELLDLVCSEL 355
G+LLD V +L
Sbjct: 153 GDLLDEVIKKL 163
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 96/192 (50%), Gaps = 38/192 (19%)
Query: 169 VGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSKSQ 228
+GRPNVGKS+L N ++ +R IV + G TRD + E +++++DT G+ + +
Sbjct: 180 IGRPNVGKSSLVNAMLNQDRVIVSNIEGTTRDAIDTPFRMNERDYVIIDTAGI----RKR 235
Query: 229 PNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGLTA 288
+ ED+ + + +A +AI+ S V++FL+DG+AG+ A
Sbjct: 236 GKVYEDVEKYSVL-----------------------RAMSAIDRSDVVLFLIDGEAGIRA 272
Query: 289 ADEEIADWLRKNYMDKFIILAVNKC------ESPRKGIMQV--SEFWSLGFSPLP-ISAI 339
D+ + + + K II+ NK E+ + + +V SEF L ++P+ +SA+
Sbjct: 273 QDKHVVGFAHE--AGKPIIIVYNKWDVVDKEETAMEDVKKVIRSEFMYLSYAPIVFVSAL 330
Query: 340 SGTGTGELLDLV 351
+ L+ L+
Sbjct: 331 TRKRVHTLIPLI 342
>gi|27363891|ref|NP_759419.1| GTP-binding protein Der [Vibrio vulnificus CMCP6]
gi|31340067|sp|Q8DF02.1|DER_VIBVU RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|27360008|gb|AAO08946.1| GTP-binding protein EngA [Vibrio vulnificus CMCP6]
Length = 496
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 106/192 (55%), Gaps = 40/192 (20%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YG++ GEH+F+++DTGG+
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRSRDALVADFPGLTRDRKYGQAKVGEHDFIVIDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
EG+ E Q+ AAI E+ V++F+VD
Sbjct: 61 DGSE------------------EGVETKMAE------------QSLAAIREADVVLFMVD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSPL-PIS 337
G+AGLT +DE IA LRK ++K +L VNK + GI ++FW LG + I+
Sbjct: 91 GRAGLTPSDEAIAAHLRK--IEKATMLVVNKVD----GIDADAASADFWQLGVDEMYQIA 144
Query: 338 AISGTGTGELLD 349
A G G L++
Sbjct: 145 AAHGRGVTALIE 156
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 99/220 (45%), Gaps = 40/220 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS L NR++G R +V D PG TRD +Y E++L+DT GV
Sbjct: 209 KLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRRR 268
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K + E ++ T+ A+E++ V++ ++D +
Sbjct: 269 GKVHETV-EKFSVVKTL--------------------------KAVEDANVVLLVIDARE 301
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSEFWSLGFSPLP----IS 337
++ D + + + I+LAVNK ++ K ++ LGF IS
Sbjct: 302 NISDQDLSLLGFALN--AGRSIVLAVNKWDGLDNEVKENVKKELDRRLGFVDFARIHFIS 359
Query: 338 AISGTGTGELLDLVCSELKKVEVCIGFLLICNAITKIFHI 377
A+ GTG G L + V + +G + +T+I +
Sbjct: 360 ALHGTGVGHLFESVQEAYRSATTRVG----TSVLTRIMKM 395
>gi|357420795|ref|YP_004928241.1| GTP-binding protein EngA [Blattabacterium sp. (Mastotermes
darwiniensis) str. MADAR]
gi|354803302|gb|AER40416.1| GTP-binding protein EngA [Blattabacterium sp. (Mastotermes
darwiniensis) str. MADAR]
Length = 435
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/195 (41%), Positives = 112/195 (57%), Gaps = 34/195 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
V+IVGRPNVGKS LFNRLVG +AIV + GVTRDR+YG S W F +VDTGG N
Sbjct: 5 VSIVGRPNVGKSTLFNRLVGKRKAIVHVKSGVTRDRIYGNSEWNGVTFSVVDTGGYNN-- 62
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+ +I++ + I +Q A++ES VI+FL+D + G
Sbjct: 63 --KMDILD--------------------------TEIRKQILIAVKESDVILFLIDMKIG 94
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLP-ISAISGTGT 344
L + EI+ LRK K I+L VNK ++ + ++F+ LGFS ISAI+G+GT
Sbjct: 95 LLDVEIEISQILRK--YQKSILLIVNKVDNGTY-MYHNTDFFRLGFSNYYFISAINGSGT 151
Query: 345 GELLDLVCSELKKVE 359
G++LD + LK++E
Sbjct: 152 GDMLDGLVEILKELE 166
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 68/154 (44%), Gaps = 33/154 (21%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEF--MLVDTGG 220
PR +++GRPNVGKS L N + N IV + G TRD + F+ + + +LVDT G
Sbjct: 176 FPRFSVIGRPNVGKSTLINSFLEKNHHIVTNISGTTRDSL--DVFYQKFGYRCILVDTPG 233
Query: 221 VLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLV 280
V SK I E + +T+ + IE + + + +V
Sbjct: 234 VRKRSK----ISESIDFYSTM-----------------------RTVKTIEYTDICLLMV 266
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
D G + D I + KN K II+ +NK +
Sbjct: 267 DAVRGWESQDRNIFRLVEKN--QKGIIIIINKWD 298
>gi|257063685|ref|YP_003143357.1| hypothetical protein Shel_09700 [Slackia heliotrinireducens DSM
20476]
gi|256791338|gb|ACV22008.1| small GTP-binding protein domain/GTP-binding conserved hypothetical
protein [Slackia heliotrinireducens DSM 20476]
Length = 438
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/197 (40%), Positives = 108/197 (54%), Gaps = 33/197 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA+VGRPNVGKS NR+ + AIV + GVTRDR Y + W F L+DTGG
Sbjct: 3 LPIVAVVGRPNVGKSTFVNRIAHADDAIVHEMRGVTRDRSYHNADWRGVHFTLIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I + +A S I QA A +E+ VI+F+VDG
Sbjct: 61 -----------------------IEMGDDDA----FQSSIRDQAFMAADEADVILFMVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+TA DEE+A LRK +D + L VNK ++P K + + EF+SLG P IS+ G
Sbjct: 94 KTGITADDEEVARVLRK--VDTPVFLLVNKMDNPSK-MEENWEFYSLGLGDPRSISSTHG 150
Query: 342 TGTGELLDLVCSELKKV 358
GTG+LLD V + L+++
Sbjct: 151 HGTGDLLDEVVAILREL 167
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 92/194 (47%), Gaps = 37/194 (19%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAI+GRPN GKS+L NRL+G +R+IV D G TRD + R + +VDT G+
Sbjct: 181 VAIIGRPNAGKSSLTNRLIGRDRSIVSDVAGTTRDAIDTRVEHDGKVYTIVDTAGL---- 236
Query: 226 KSQPNIMEDLAITTTI-GMEGIPLATREAAVARMPSMI------ERQATAAIEESCVIIF 278
+ + I ED+ + + M I A + A+ M + + +R A A E C +I
Sbjct: 237 RRKSQIDEDVEYYSYVRAMRAIDRA--DVAILVMDATLGLTDQDQRVAGYANERGCALII 294
Query: 279 LVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP-LPIS 337
L++ + + + D + D LR++ D+ + ++P + IS
Sbjct: 295 LLNKRDVVESGD--VLDGLREDVGDRMTF---------------------VNYAPVISIS 331
Query: 338 AISGTGTGELLDLV 351
A++G G + D +
Sbjct: 332 ALTGKGVLRIWDAI 345
>gi|320157270|ref|YP_004189649.1| GTP-binding protein EngA [Vibrio vulnificus MO6-24/O]
gi|319932582|gb|ADV87446.1| GTP-binding protein EngA [Vibrio vulnificus MO6-24/O]
Length = 496
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 106/192 (55%), Gaps = 40/192 (20%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YG++ GEH+F+++DTGG+
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRSRDALVADFPGLTRDRKYGQAKVGEHDFIVIDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
EG+ E Q+ AAI E+ V++F+VD
Sbjct: 61 DGSE------------------EGVETKMAE------------QSLAAIREADVVLFMVD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSPL-PIS 337
G+AGLT +DE IA LRK ++K +L VNK + GI ++FW LG + I+
Sbjct: 91 GRAGLTPSDEAIAAHLRK--IEKATMLVVNKVD----GIDADAASADFWQLGVDEMYQIA 144
Query: 338 AISGTGTGELLD 349
A G G L++
Sbjct: 145 AAHGRGVTALIE 156
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 99/220 (45%), Gaps = 40/220 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS L NR++G R +V D PG TRD +Y E++L+DT GV
Sbjct: 209 KLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRRR 268
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K + E ++ T+ A+E++ V++ ++D +
Sbjct: 269 GKVHETV-EKFSVVKTL--------------------------KAVEDANVVLLVIDARE 301
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSEFWSLGFSPLP----IS 337
++ D + + + I+LAVNK ++ K ++ LGF IS
Sbjct: 302 NISDQDLSLLGFALN--AGRSIVLAVNKWDGLDNEVKENVKKELDRRLGFVDFARIHFIS 359
Query: 338 AISGTGTGELLDLVCSELKKVEVCIGFLLICNAITKIFHI 377
A+ GTG G L + V + +G + +T+I +
Sbjct: 360 ALHGTGVGHLFESVQEAYRSATTRVG----TSVLTRIMKM 395
>gi|427392465|ref|ZP_18886470.1| GTPase Der [Alloiococcus otitis ATCC 51267]
gi|425731426|gb|EKU94244.1| GTPase Der [Alloiococcus otitis ATCC 51267]
Length = 437
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 108/193 (55%), Gaps = 34/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAI+GRPNVGKS +FNR++G AIV DEPGVTRDR+Y + W +F ++DTGG
Sbjct: 4 PLVAIIGRPNVGKSTIFNRIIGDRLAIVQDEPGVTRDRIYADAEWLGKDFSVIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I + +PL I+ QA AI+E+ VI+ + +
Sbjct: 61 -----------------ITFDDLPLHEE----------IKVQAEIAIDEADVIVMVTSVK 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T D+++A L+++ +K ++LAVNK ++P ++ EF+ LG PLP+S G
Sbjct: 94 EGITDLDDQVALILQQS--NKPVVLAVNKTDNPELR-NEIYEFYGLGLGDPLPVSGSHGL 150
Query: 343 GTGELLDLVCSEL 355
G G+LLD V +
Sbjct: 151 GFGDLLDAVVANF 163
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 81/164 (49%), Gaps = 32/164 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE--HEFMLVDTGGVL 222
+ ++GRPNVGKS+L N ++G +R IV + G TRD + F + +++++DT G+
Sbjct: 177 KFCLIGRPNVGKSSLVNAIIGEDRVIVSELEGTTRDAI-DTPFMTQDGQDYVMIDTAGI- 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + + E T + +V R A AI+ S V++ ++D
Sbjct: 235 ---RRRGKVYE---------------KTEKYSVMR--------AQRAIDRSDVVLCVLDA 268
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
+ G+ D+++ + + K II+ VNK ++ +K + +F
Sbjct: 269 ETGIRDQDKKVFGYAHQ--AGKGIIILVNKWDTIKKETNTMRDF 310
>gi|161486654|ref|NP_933563.2| GTP-binding protein EngA [Vibrio vulnificus YJ016]
gi|41016999|sp|Q7MNE7.2|DER_VIBVY RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
Length = 496
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 106/192 (55%), Gaps = 40/192 (20%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YG++ GEH+F+++DTGG+
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRSRDALVADFPGLTRDRKYGQAKVGEHDFIVIDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
EG+ E Q+ AAI E+ V++F+VD
Sbjct: 61 DGSE------------------EGVETKMAE------------QSLAAIREADVVLFMVD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSPL-PIS 337
G+AGLT +DE IA LRK ++K +L VNK + GI ++FW LG + I+
Sbjct: 91 GRAGLTPSDEAIAAHLRK--IEKATMLVVNKVD----GIDADAASADFWQLGVDEMYQIA 144
Query: 338 AISGTGTGELLD 349
A G G L++
Sbjct: 145 AAHGRGVTALIE 156
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 99/220 (45%), Gaps = 40/220 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS L NR++G R +V D PG TRD +Y E++L+DT GV
Sbjct: 209 KLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRRR 268
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K + E ++ T+ A+E++ V++ ++D +
Sbjct: 269 GKVHETV-EKFSVVKTL--------------------------KAVEDANVVLLVIDARE 301
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSEFWSLGFSPLP----IS 337
++ D + + + I+LAVNK ++ K ++ LGF IS
Sbjct: 302 NISDQDLSLLGFALN--AGRSIVLAVNKWDGLDNEVKENVKKELDRRLGFVDFARIHFIS 359
Query: 338 AISGTGTGELLDLVCSELKKVEVCIGFLLICNAITKIFHI 377
A+ GTG G L + V + +G + +T+I +
Sbjct: 360 ALHGTGVGHLFESVQEAYRSATTRVG----TSVLTRIMKM 395
>gi|407893158|ref|ZP_11152188.1| GTP-binding protein Der [Diplorickettsia massiliensis 20B]
Length = 224
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 106/189 (56%), Gaps = 33/189 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P + +VGRPNVGKS+LFNRL +A+V D PG+TRDR+YG +G F+++DTGG+ +
Sbjct: 6 PSIVLVGRPNVGKSSLFNRLTQTRQALVADWPGLTRDRLYGHGIFGHRSFLIIDTGGLTD 65
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ EGI +++ +Q AI E+ I+F+VD Q
Sbjct: 66 GKQ-----------------EGI------------DALMAQQTQQAISEADYILFMVDAQ 96
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLP-ISAISGT 342
AG+T+ D+ +A LRK ++K + L VNK E + +SEF SLGFS + IS + G
Sbjct: 97 AGVTSLDQTLAQNLRK--LNKPMSLVVNKSEGLAPETL-ISEFSSLGFSNIAFISVVHGE 153
Query: 343 GTGELLDLV 351
GT L+ V
Sbjct: 154 GTAGLMQQV 162
>gi|223985795|ref|ZP_03635838.1| hypothetical protein HOLDEFILI_03144 [Holdemania filiformis DSM
12042]
gi|223962243|gb|EEF66712.1| hypothetical protein HOLDEFILI_03144 [Holdemania filiformis DSM
12042]
Length = 434
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 106/186 (56%), Gaps = 36/186 (19%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS +FNR++G +IV D PGVTRDR+YG+ W +F L+DTGG
Sbjct: 6 VAIVGRPNVGKSTIFNRILGERVSIVEDTPGVTRDRIYGKGTWLTQDFRLIDTGG----- 60
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
I +E P I+ Q AIEE+ VI+F+V+G+ G
Sbjct: 61 ---------------IQLENQPFQEE----------IKAQVEIAIEEADVILFVVNGRDG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKC-ESPRKGIMQVSEFWSLGFS-PLPISAISGTG 343
+T DE IA LR++ K ++LAVNK ++ +G + EF++LG S P+ +S G G
Sbjct: 96 VTGDDEFIARMLRRS--GKPVVLAVNKIDDATLQG--NIYEFYALGLSEPIAVSGSHGIG 151
Query: 344 TGELLD 349
G+++D
Sbjct: 152 IGDVMD 157
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 97/211 (45%), Gaps = 43/211 (20%)
Query: 155 IGNVPEHLLP-----RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWG 209
+G PE P R AI+GRPNVGKS+L N L+ R IV D G TRD +
Sbjct: 160 VGAFPEKQQPELEGIRFAIIGRPNVGKSSLVNALLKEERVIVSDIEGTTRDAVDTPFEHD 219
Query: 210 EHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAA 269
++++VDT G+ K NI + +V R A +A
Sbjct: 220 GKQYVVVDTAGIRKRGKVYENI-------------------EKYSVLR--------AMSA 252
Query: 270 IEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSE- 325
IE V++F++DG++G+ D+ +A + + K II+ NK E K + +V+E
Sbjct: 253 IERCDVVLFVIDGESGIREQDKHVAGYAHE--AGKPIIIVYNKWDAVEKDEKTMNRVTEQ 310
Query: 326 ----FWSLGFSP-LPISAISGTGTGELLDLV 351
F L ++P L +SA + LL ++
Sbjct: 311 IRAQFVYLSYAPVLFVSAKTHQRVNTLLPMI 341
>gi|145589468|ref|YP_001156065.1| GTP-binding protein EngA [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|189037153|sp|A4SYD7.1|DER_POLSQ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|145047874|gb|ABP34501.1| small GTP-binding protein [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 454
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 101/187 (54%), Gaps = 33/187 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P + IVGRPNVGKS LFNRL A+V D G+TRDR YG+ GE F+ VDTGG
Sbjct: 3 PVITIVGRPNVGKSTLFNRLTRSRDALVADFSGLTRDRHYGKGRIGERAFICVDTGGFEP 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
V+K+ I+ ++A +Q A+ ES ++IFLVDG+
Sbjct: 63 VAKT--GIVAEMA---------------------------KQTKQAVAESDIVIFLVDGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+ D IAD+LRK + +ILAVNK E + GI+ ++F LG P PIS+ G
Sbjct: 94 LGMAPQDRVIADFLRKT--GRPVILAVNKTEGMQSGIV-TADFHELGLGEPFPISSAHGD 150
Query: 343 GTGELLD 349
G L+D
Sbjct: 151 GVKGLID 157
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 87/193 (45%), Gaps = 40/193 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++A+VGRPNVGKS L N+L+G R I D PG TRD + ++LVDT G+
Sbjct: 182 KIAVVGRPNVGKSTLINKLIGEERVIAFDMPGTTRDAIEVPFERNGKPYILVDTAGLRRR 241
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K I E ++ T+ AI + V+I ++D Q
Sbjct: 242 GKVFEAI-EKFSVVKTL--------------------------QAIADCNVVILMLDAQQ 274
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKC--------ESPRKGIMQVSEFWSLGFSPL-P 335
++ D IA ++ + + +++AVNK E R I Q F L F+ + P
Sbjct: 275 DISEQDAHIAGFIVE--AGRALVVAVNKWDGLDAYVKERARLEIAQKLRF--LDFANVHP 330
Query: 336 ISAISGTGTGELL 348
ISA GTG +L
Sbjct: 331 ISAKKGTGLKDLF 343
>gi|37197696|dbj|BAC93534.1| predicted GTP-binding protein [Vibrio vulnificus YJ016]
Length = 511
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 107/192 (55%), Gaps = 40/192 (20%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YG++ GEH+F+++DTGG
Sbjct: 16 MIPVVALVGRPNVGKSTLFNRLTRSRDALVADFPGLTRDRKYGQAKVGEHDFIVIDTGG- 74
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ S+ + +A Q+ AAI E+ V++F+VD
Sbjct: 75 --IDGSEEGVETKMA---------------------------EQSLAAIREADVVLFMVD 105
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSPL-PIS 337
G+AGLT +DE IA LRK ++K +L VNK + GI ++FW LG + I+
Sbjct: 106 GRAGLTPSDEAIAAHLRK--IEKATMLVVNKVD----GIDADAASADFWQLGVDEMYQIA 159
Query: 338 AISGTGTGELLD 349
A G G L++
Sbjct: 160 AAHGRGVTALIE 171
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 99/220 (45%), Gaps = 40/220 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS L NR++G R +V D PG TRD +Y E++L+DT GV
Sbjct: 224 KLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRRR 283
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K + E ++ T+ A+E++ V++ ++D +
Sbjct: 284 GKVHETV-EKFSVVKTL--------------------------KAVEDANVVLLVIDARE 316
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSEFWSLGFSPLP----IS 337
++ D + + + I+LAVNK ++ K ++ LGF IS
Sbjct: 317 NISDQDLSLLGFALN--AGRSIVLAVNKWDGLDNEVKENVKKELDRRLGFVDFARIHFIS 374
Query: 338 AISGTGTGELLDLVCSELKKVEVCIGFLLICNAITKIFHI 377
A+ GTG G L + V + +G + +T+I +
Sbjct: 375 ALHGTGVGHLFESVQEAYRSATTRVG----TSVLTRIMKM 410
>gi|373106138|ref|ZP_09520442.1| GTPase Der [Stomatobaculum longum]
gi|371653234|gb|EHO18638.1| GTPase Der [Stomatobaculum longum]
Length = 444
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 107/196 (54%), Gaps = 32/196 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPN GKS+LFN + G +IV D PGVTRDR+Y W +F L+DTGG+
Sbjct: 4 PIVAIVGRPNTGKSSLFNAIAGEPISIVKDIPGVTRDRIYADCTWLNRDFTLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P + L ++ + QA AIE + VIIFL D +
Sbjct: 62 ----EPESRDKLLVS-----------------------MREQAEIAIETADVIIFLTDVR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T AD+ +AD LR+ K ++LAVNK +S K + EF++L P+P+SA S
Sbjct: 95 TGVTDADDRVADMLRR--AKKPVVLAVNKVDSFTKFQNDIYEFYNLACGDPIPVSAASRL 152
Query: 343 GTGELLDLVCSELKKV 358
G G+LL+ V + +V
Sbjct: 153 GIGDLLEAVEAYFPQV 168
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 38/197 (19%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P+VA++G+PNVGKS++ NRL+G NR IV D G TRD + E++ +DT G+
Sbjct: 179 PKVALIGKPNVGKSSIINRLLGENRVIVSDIAGTTRDAIDTVVVHDGQEYVFIDTAGIRR 238
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
SK +I E +I T+ A+E + V++ ++D
Sbjct: 239 KSKIHEDI-ERYSIIRTV--------------------------TAVERADVVLLVIDAS 271
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFW-----SLGFSP----L 334
G+T D +IA + K I++ VNK + K + EF +L F L
Sbjct: 272 EGVTEQDAKIAGVAHEK--GKGILVVVNKWDLVEKTDKTMKEFTDKIKNTLSFMSYAEFL 329
Query: 335 PISAISGTGTGELLDLV 351
+SA +G +L +++
Sbjct: 330 FVSAETGQRMNKLFEMI 346
>gi|291522204|emb|CBK80497.1| ribosome-associated GTPase EngA [Coprococcus catus GD/7]
Length = 441
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/194 (39%), Positives = 107/194 (55%), Gaps = 32/194 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAI+GRPNVGKS LFN L G +IV D PGVTRDR+Y W +F ++DTGG+
Sbjct: 4 PIVAIIGRPNVGKSTLFNALAGQQISIVKDTPGVTRDRIYADVNWLNTQFTMIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P+ DL + SM E QA AIE + VIIFL D +
Sbjct: 62 ----EPS-TNDLI---------------------LKSMRE-QAEIAIETADVIIFLTDVR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+ AD ++A+ +R++ K ++L VNK ++ + + V EF++LG P+PIS S
Sbjct: 95 QGVVDADFQVANMIRRS--GKPVVLVVNKVDNFKTMMADVYEFYNLGLGDPMPISGNSKL 152
Query: 343 GTGELLDLVCSELK 356
G G++LD V K
Sbjct: 153 GLGDMLDEVIKHFK 166
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 101/209 (48%), Gaps = 38/209 (18%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVG+PNVGKS+L N+L G NR IV + G TRD + E++ +DT G+
Sbjct: 178 PHVAIVGKPNVGKSSLINKLTGENRVIVSNIAGTTRDAIDTVIKHNGKEYVFIDTAGLRR 237
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
SK + +I E +I T+ +A+E + V++ ++D +
Sbjct: 238 KSKIKEDI-ERYSIIRTV--------------------------SAVERANVVVLMIDAK 270
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFW-----SLGFSP----L 334
G+T D +IA + K +I+AVNK ++ K +++F L F P L
Sbjct: 271 EGVTEQDAKIAGIAHER--GKGMIIAVNKWDAIEKDDKTMNKFTKDVREKLAFMPYAEML 328
Query: 335 PISAISGTGTGELLDLVCSELKKVEVCIG 363
ISA +G +L D + + ++ + +G
Sbjct: 329 FISAETGQRLPKLFDTIDAVIENHAMRVG 357
>gi|346310348|ref|ZP_08852365.1| ribosome-associated GTPase EngA [Collinsella tanakaei YIT 12063]
gi|345898023|gb|EGX67913.1| ribosome-associated GTPase EngA [Collinsella tanakaei YIT 12063]
Length = 445
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 103/193 (53%), Gaps = 31/193 (16%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+ P VAIVGRPNVGKS L NR+ AIV GVTRDR Y + W F LVDTGG+
Sbjct: 1 MKPIVAIVGRPNVGKSTLVNRIAQTADAIVHQSRGVTRDRSYHEADWNGRSFTLVDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+P ED+ + I QA AA EE+ VI+F+VD
Sbjct: 61 ------EPLKSEDV----------------------FSASIRDQALAACEEAAVILFVVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G G+T DE +A L++ + + L VNK ++P + + EF+SLG P+ ISA+
Sbjct: 93 GTTGVTEEDESVARMLKR--VKAPVFLLVNKLDNPDREGDNLWEFYSLGVGEPIAISALH 150
Query: 341 GTGTGELLDLVCS 353
G GTG+LLD V +
Sbjct: 151 GHGTGDLLDEVVA 163
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 63/121 (52%), Gaps = 9/121 (7%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAI+GRPN GKS+LFN+++G +R+IV D G TRD + + +VDT G+
Sbjct: 183 VAIIGRPNAGKSSLFNKIIGSDRSIVSDIAGTTRDAIDTIVERDGRRYCMVDTAGI---- 238
Query: 226 KSQPNIMEDLAITTTI-GMEGIPLATREAAVAR----MPSMIERQATAAIEESCVIIFLV 280
+ + + E++ + + G+ I A V M ++ A AIE C ++ L+
Sbjct: 239 RKKSTVYENIEYYSMVRGLRAIDRADVALLVVDSTTGMTEQDQKVANLAIERGCALVILL 298
Query: 281 D 281
+
Sbjct: 299 N 299
>gi|390943153|ref|YP_006406914.1| ribosome-associated GTPase EngA [Belliella baltica DSM 15883]
gi|390416581|gb|AFL84159.1| ribosome-associated GTPase EngA [Belliella baltica DSM 15883]
Length = 437
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 104/193 (53%), Gaps = 35/193 (18%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS FNRLV +AI + GVTRDR YG + WG F ++DTGG +
Sbjct: 5 VAIVGRPNVGKSTFFNRLVEERKAIEDNMSGVTRDRHYGHAQWGGKYFSVIDTGGYV--- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
IG + + + I +Q T AIEE+ VI+F+VD G
Sbjct: 62 ---------------IGSDDV-----------FEAEIRKQVTLAIEEANVILFVVDCHDG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP---LPISAISGT 342
LT D++ A+ LR + K + + NK ++ K + SEF++LG PI+A+SG+
Sbjct: 96 LTDLDKDFANVLRSS--KKPVYIVANKADTQEKE-LNASEFYALGLGDNDVFPIAAVSGS 152
Query: 343 GTGELLDLVCSEL 355
GTG+LLD V
Sbjct: 153 GTGDLLDEVIKHF 165
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 29/156 (18%)
Query: 159 PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDT 218
P+ +P+++I+GRPNVGKS+ N L+G R+IV +E G TRD + R +F++ DT
Sbjct: 173 PDEGIPKISILGRPNVGKSSFLNALLGTERSIVTNEAGTTRDAINTRYKLYGQDFIITDT 232
Query: 219 GGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIF 278
G+ + + + ED+ + + ++ +EES VII
Sbjct: 233 AGI----RKKAKVKEDIEFYSVM-----------------------RSLRTLEESDVIIV 265
Query: 279 LVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
++D + G A D + KN +K I++ VNK +
Sbjct: 266 MIDAERGFEAQDMNLISLGIKN--NKGIMIMVNKWD 299
>gi|237843971|ref|XP_002371283.1| GTP-binding protein EngA , putative [Toxoplasma gondii ME49]
gi|211968947|gb|EEB04143.1| GTP-binding protein EngA , putative [Toxoplasma gondii ME49]
gi|221483760|gb|EEE22072.1| hypothetical protein TGGT1_123310 [Toxoplasma gondii GT1]
Length = 1146
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/283 (33%), Positives = 129/283 (45%), Gaps = 46/283 (16%)
Query: 73 SSSNDDAFEDSPFEDEDDDAEYEDVDDESDGQDFGIDVDALEREA-KDAVREYSSLLSRQ 131
+S+ D + FE ED+D +VD D D DV ER K+ R+
Sbjct: 571 TSAGDKGDKARRFEPEDED----EVDSNQDEGDLLYDVRQAERTPDKELTRDTEEETGSS 626
Query: 132 LIIQDETDDRKDSGKKQKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLV----GGN 187
+ + + S K ++ E +P V ++GRPNVGKS+LFN L
Sbjct: 627 GVAFRLSTPHRSSQKLVRR---------EGRVPCVCLLGRPNVGKSSLFNTLKDKEDTAA 677
Query: 188 RAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIP 247
AIV DE G TRDR Y S W F++VDTGG++ ED
Sbjct: 678 DAIVRDEDGTTRDRHYAFSVWRGRPFIVVDTGGLI--------FEED------------- 716
Query: 248 LATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFII 307
A A I Q A+EE+ IF+VDG+ GL DE IA +LR++ ++
Sbjct: 717 ----RYAAALYAEEIRTQVKCALEEATCAIFVVDGRHGLDGEDEVIAHFLRRSKTP--VV 770
Query: 308 LAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGTGTGELLD 349
+ VNK E+ R GI +FW LG P P SA+ G G +LLD
Sbjct: 771 VCVNKTENVRSGIASAQDFWKLGLGQPFPCSAVEGVGLPDLLD 813
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV--LN 223
VAIVGRPNVGKS L NRL+G +R++V + G TRD + + LVDT G+
Sbjct: 872 VAIVGRPNVGKSQLLNRLLGVSRSLVSPQAGTTRDAVDELVQRDGRLYRLVDTAGIRRAR 931
Query: 224 VSKSQPNI 231
V K+Q +
Sbjct: 932 VVKAQKGV 939
>gi|237654043|ref|YP_002890357.1| GTP-binding protein EngA [Thauera sp. MZ1T]
gi|237625290|gb|ACR01980.1| small GTP-binding protein [Thauera sp. MZ1T]
Length = 442
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/191 (39%), Positives = 105/191 (54%), Gaps = 33/191 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P + +VGRPNVGKS LFNRL A+V D+PG+TRDR YG G+ ++++VDT G
Sbjct: 3 PTIVLVGRPNVGKSTLFNRLTRTRDALVADQPGLTRDRHYGIGRVGDRDYLVVDTAGFDP 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
V+K IM ++A RQA AI E+ V++FLVDG+
Sbjct: 63 VAKD--GIMHEMA---------------------------RQAEQAIAEADVLLFLVDGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
AG T DE IA LR+ + + + VNK E + M ++F +LG PLP+SA G
Sbjct: 94 AGRTPHDENIAARLRR--AGRPVHVVVNKAEGIDRA-MVAADFHALGLGDPLPVSAAHGD 150
Query: 343 GTGELLDLVCS 353
G +L++LV +
Sbjct: 151 GVKQLVELVLA 161
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 29/152 (19%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P+VAIVGRPNVGKS L N L+G R I D PG TRD + G + L+DT G+
Sbjct: 177 PKVAIVGRPNVGKSTLVNTLLGEERVIAFDMPGTTRDAISIPFERGGKRYTLIDTAGLRR 236
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K + E ++ T+ A++E V++ ++D
Sbjct: 237 RGKVFEAV-EKFSVIKTL--------------------------QAVQECNVVVLVLDAA 269
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCES 315
++ D IA + + + +++A+NK ++
Sbjct: 270 QDISDQDAHIAGFALE--AGRALVVAINKWDA 299
>gi|440748785|ref|ZP_20928036.1| GTP-binding protein EngA [Mariniradius saccharolyticus AK6]
gi|436482909|gb|ELP38997.1| GTP-binding protein EngA [Mariniradius saccharolyticus AK6]
Length = 437
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 102/193 (52%), Gaps = 35/193 (18%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS FNRLV +AI + GVTRDR YG + WG+ F ++DTGG + S
Sbjct: 5 VAIVGRPNVGKSTFFNRLVEERKAIEDNVSGVTRDRHYGHATWGDRFFSVIDTGGYVTGS 64
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
ED+ + I +Q AIEE+ VI+F+VD G
Sbjct: 65 -------EDV----------------------FEAEIRKQVKLAIEEANVILFVVDCHDG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP---LPISAISGT 342
LT D E A LR + K I + NK ++ + ++ +EF+ LG PI+AISG+
Sbjct: 96 LTDLDREFAQVLRSS--KKPIYIVANKADTATQ-VLNAAEFYELGLGDNQVFPIAAISGS 152
Query: 343 GTGELLDLVCSEL 355
GTG+LLD V
Sbjct: 153 GTGDLLDEVIKHF 165
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 78/156 (50%), Gaps = 29/156 (18%)
Query: 159 PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDT 218
P+ +P++AI+GRPNVGKS+ N L+G RAIV DE G TRD ++ R +F++ DT
Sbjct: 173 PDEGIPKIAILGRPNVGKSSFLNALLGKERAIVTDEAGTTRDAIHTRYKLYGKDFIITDT 232
Query: 219 GGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIF 278
G+ + + + ED+ + + ++ +E+S V+I
Sbjct: 233 AGI----RKKAKVKEDIEFYSVM-----------------------RSLRTLEDSDVLII 265
Query: 279 LVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
+VD G + D + KN +K II+ VNK +
Sbjct: 266 VVDATRGFESQDMNLVTLGIKN--NKGIIIMVNKWD 299
>gi|227529194|ref|ZP_03959243.1| GTP-binding protein EngA [Lactobacillus vaginalis ATCC 49540]
gi|227350919|gb|EEJ41210.1| GTP-binding protein EngA [Lactobacillus vaginalis ATCC 49540]
Length = 437
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 109/193 (56%), Gaps = 34/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNR+ G +IV D PGVTRDR+Y + W F L+DTGG
Sbjct: 4 PVVAIVGRPNVGKSTLFNRIAGERISIVEDTPGVTRDRIYAHAEWLGKNFNLIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I + PL T+ I +QA AI+E+ VI+ +VD Q
Sbjct: 61 -----------------IEISDQPLLTQ----------IRQQAEVAIDEADVIVLVVDIQ 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T ADE++A L ++ DK I+LAVNK ++P + + +F+SLG P P+S + G
Sbjct: 94 NGVTDADEQVAKILYRS--DKPIVLAVNKVDNPERR-SDIYDFYSLGLGEPYPVSGVHGV 150
Query: 343 GTGELLDLVCSEL 355
G G+LLD V +
Sbjct: 151 GVGDLLDAVINHF 163
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 82/178 (46%), Gaps = 39/178 (21%)
Query: 167 AIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLNVS 225
+++GRPNVGKS+L N ++G NR IV + G TRD + R + EF ++DT G+
Sbjct: 178 SLIGRPNVGKSSLVNAILGENRVIVSNVAGTTRDAINTRFTAKDGREFTMIDTAGIRKKG 237
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
K N T ++ R + AI++S V++ +++ + G
Sbjct: 238 KIYEN-------------------TERYSLMR--------SMRAIDDSDVVLVVLNAEEG 270
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV---------SEFWSLGFSPL 334
+ D+ IA + + +I+ VNK ++ + + +EF L ++P+
Sbjct: 271 IRELDKHIAGYAHEAGCG--VIIVVNKWDTIKNKDHRTMTDFTTLIRNEFQYLSYAPI 326
>gi|89901081|ref|YP_523552.1| GTP-binding protein EngA [Rhodoferax ferrireducens T118]
gi|122479081|sp|Q21W32.1|DER_RHOFD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|89345818|gb|ABD70021.1| Small GTP-binding protein domain [Rhodoferax ferrireducens T118]
Length = 447
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 104/193 (53%), Gaps = 33/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFNRL AIV D G+TRDR YG + G+HEF+++DTGG
Sbjct: 3 PVVALVGRPNVGKSTLFNRLTKSRDAIVADFAGLTRDRHYGNAKQGKHEFIVIDTGGF-- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P+ A + + +Q T A+ E+ V+IF+VD +
Sbjct: 61 ----EPD-----------------------AAGGIFKEMAKQTTQAVAEADVVIFVVDAR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGT 342
G++A D EIA +LR+ + K +LA NK E G Q+ EF+ LG + ISA G
Sbjct: 94 EGISAQDHEIAKYLRR--LGKPCVLAANKAEGMLAG-AQLVEFFELGLGEVHAISAAHGQ 150
Query: 343 GTGELLDLVCSEL 355
G L+DL + L
Sbjct: 151 GIRTLVDLALAPL 163
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 80/181 (44%), Gaps = 46/181 (25%)
Query: 135 QDETDDRKDSGKKQKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDE 194
QD+ D++++ G + ++A+ GRPNVGKS L N +G R + D
Sbjct: 168 QDDADEQREPG-----------------IIKLAVAGRPNVGKSTLINTWLGEERLVAFDL 210
Query: 195 PGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAA 254
PG TRD + +F LVDT G+ K I E ++ T+
Sbjct: 211 PGTTRDAISVPFERNGQKFELVDTAGLRRRGKVFEAI-EKFSVVKTL------------- 256
Query: 255 VARMPSMIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
AIE S V++ L+D G+T D IA ++ +N + +++AVNK +
Sbjct: 257 -------------QAIESSNVVLLLIDATQGVTDQDAHIAGYILEN--GRAVVIAVNKWD 301
Query: 315 S 315
+
Sbjct: 302 A 302
>gi|348026191|ref|YP_004765996.1| GTP-binding protein engA [Megasphaera elsdenii DSM 20460]
gi|341822245|emb|CCC73169.1| GTP-binding protein engA [Megasphaera elsdenii DSM 20460]
Length = 443
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/196 (40%), Positives = 107/196 (54%), Gaps = 32/196 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN +V +IV D PGVTRDR+Y + W EF ++DTGG+
Sbjct: 4 PLVAVVGRPNVGKSTLFNAIVKKRISIVEDIPGVTRDRIYFDAEWLGQEFTMIDTGGIEF 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
V D I T+ + QA AI E+ VI+++VDG+
Sbjct: 64 VDS-------DNHIFTS---------------------MRYQAELAIREADVILYVVDGK 95
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+ DEEIA LR K +IL VNK +S + M + EF+SLG P+ +SA++
Sbjct: 96 VGVQPQDEEIAHILRS--CGKPVILVVNKIDSVEQE-MNIYEFYSLGLGDPIGVSAVNLM 152
Query: 343 GTGELLDLVCSELKKV 358
G+LLD V +KKV
Sbjct: 153 NLGDLLDEVLKYIKKV 168
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 73/149 (48%), Gaps = 29/149 (19%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+A+VGRPNVGKS+L N L+G +R IV + PG TRD + + +F+L+DT G+ +
Sbjct: 180 IALVGRPNVGKSSLTNALLGQDRVIVSNVPGTTRDSIDTHWSYEGTDFVLIDTAGMRRKA 239
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
K I L +V R A A++ S + + ++D G
Sbjct: 240 K-------------------IDLPVERYSVVR--------ALRAVDRSDIAVLVIDATEG 272
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCE 314
+T D +IA ++ + K I+ VNK +
Sbjct: 273 VTEQDTKIAGYVHE--AGKGCIIVVNKWD 299
>gi|90410877|ref|ZP_01218891.1| GTP-binding protein EngA [Photobacterium profundum 3TCK]
gi|90328090|gb|EAS44401.1| GTP-binding protein EngA [Photobacterium profundum 3TCK]
Length = 493
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 104/192 (54%), Gaps = 40/192 (20%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YGR+ EHEF+++DTGG+
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAELEEHEFIVIDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+G T E +M Q+ AAIEE+ V++FLVD
Sbjct: 61 ----------------------DG----TEEGVETKMAE----QSLAAIEEADVVLFLVD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSPL-PIS 337
G+AGLT +DE IA LR +K L VNK + GI +EFW LG + ++
Sbjct: 91 GRAGLTVSDEAIAKHLRSR--EKPTFLVVNKID----GIDADSACAEFWKLGVDAMYQVA 144
Query: 338 AISGTGTGELLD 349
A G L++
Sbjct: 145 AAHNRGVTALME 156
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 93/195 (47%), Gaps = 36/195 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS L NR++G R +V D PG TRD +Y E++L+DT GV
Sbjct: 206 KLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGQEYVLIDTAGVRR- 264
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K+ +E ++ T+ A+E++ V++ ++D +
Sbjct: 265 RKNMNQAVEKFSVIQTL--------------------------KAVEDANVVLLIIDARE 298
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQ--VSEF-WSLGFSPLP----IS 337
++ D + ++ + + ++LAVNK + + + SE LGF IS
Sbjct: 299 NISDQDLSLLGFVLNS--GRSLVLAVNKWDGLDNEVKERVKSELDRRLGFIDFARIHFIS 356
Query: 338 AISGTGTGELLDLVC 352
A+ GTG G L D V
Sbjct: 357 ALHGTGVGHLYDSVI 371
>gi|282878065|ref|ZP_06286870.1| ribosome-associated GTPase EngA [Prevotella buccalis ATCC 35310]
gi|281299805|gb|EFA92169.1| ribosome-associated GTPase EngA [Prevotella buccalis ATCC 35310]
Length = 437
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 103/192 (53%), Gaps = 35/192 (18%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGG-VLNV 224
VAIVGRPNVGKS LFNRL +AIV D G TRDR YG+ W EF +VDTGG V+N
Sbjct: 5 VAIVGRPNVGKSTLFNRLTQSRKAIVSDTAGTTRDRQYGKCSWNGREFSVVDTGGWVVN- 63
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
++ ED I RQ A EE+ +++F+VD +
Sbjct: 64 ---SDDVFED--------------------------AIRRQVIVATEEADLVLFMVDVKN 94
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTG 343
GLT D ++A LR+ + +IL NK ++ + +EF+ LG P ISA +G G
Sbjct: 95 GLTDWDADVAQILRRTKLP--VILVGNKVDNSAE-YYTAAEFYRLGLGDPQCISAATGGG 151
Query: 344 TGELLDLVCSEL 355
TG+LLDLV +L
Sbjct: 152 TGDLLDLVLEKL 163
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 76/155 (49%), Gaps = 29/155 (18%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
E +PR A+VGRPN GKS+L N +G +R IV + G TRD +Y R +F LVDT
Sbjct: 172 EEDIPRFAVVGRPNAGKSSLINAFIGEDRHIVTEIAGTTRDSIYTRFDKFGFDFYLVDTA 231
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G+ SK + EDL + + ++ +IE S V I +
Sbjct: 232 GIRRKSK----VSEDLEFYSVM-----------------------RSIRSIENSDVCILM 264
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
+D G+ + D I ++KN+ K +++ VNK +
Sbjct: 265 IDATRGIESQDMNIFQLIQKNH--KSLVVVVNKWD 297
>gi|340621593|ref|YP_004740045.1| GTP-binding protein engA [Capnocytophaga canimorsus Cc5]
gi|339901859|gb|AEK22938.1| GTP-binding protein engA [Capnocytophaga canimorsus Cc5]
Length = 434
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 102/185 (55%), Gaps = 33/185 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS FNRL+ AIV GVTRDR YG++ W EF ++DTGG + S
Sbjct: 5 VAIVGRPNVGKSTFFNRLIKRREAIVDAVSGVTRDRHYGKTDWNGVEFSVIDTGGYVVGS 64
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
I++Q + AI+E+ I+F+VD + G
Sbjct: 65 DDS-----------------------------FEKEIDKQVSLAIDEADAIVFMVDVEDG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGTGT 344
+T DE +AD LRK+ K I +AVNK +S + + EF++ GF + +S+I+G+GT
Sbjct: 96 ITGMDETVADLLRKS--KKPIFVAVNKVDSNNR-VANSHEFYAFGFENVYTLSSINGSGT 152
Query: 345 GELLD 349
GELLD
Sbjct: 153 GELLD 157
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 81/185 (43%), Gaps = 35/185 (18%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LPR A+VGRPN GKS+ N L+G +R IV D G TRD + + EF LVDT G+
Sbjct: 174 LPRFAVVGRPNAGKSSFINALIGEDRYIVTDIAGTTRDAIDTKYNRFGFEFNLVDTAGIR 233
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
SK + EDL + + ++ AIE + V I ++D
Sbjct: 234 RKSK----VKEDLEFYSVM-----------------------RSIRAIEHADVCILMIDA 266
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSL------GFSPLPI 336
G D I WL + K I++ VNK + K F ++ F+ +PI
Sbjct: 267 TRGFEGQDSNIF-WLAQRNR-KGIVILVNKWDLVEKQTNTAKNFEAIIRKEIEPFTDVPI 324
Query: 337 SAISG 341
IS
Sbjct: 325 IFISA 329
>gi|312898938|ref|ZP_07758326.1| ribosome-associated GTPase EngA [Megasphaera micronuciformis F0359]
gi|310620100|gb|EFQ03672.1| ribosome-associated GTPase EngA [Megasphaera micronuciformis F0359]
Length = 442
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/198 (39%), Positives = 109/198 (55%), Gaps = 32/198 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN +V +IV D PGVTRDR+Y + W EF L+DTGG+
Sbjct: 4 PLVAVVGRPNVGKSTLFNAIVKKRISIVEDLPGVTRDRIYFDAEWLGREFTLIDTGGIEF 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
V S NI + + QA AI E+ VI+++VDG+
Sbjct: 64 VD-SDNNIF---------------------------TSMRYQAELAIHEADVILYVVDGK 95
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+ D+EIA LR + K +IL VNK +S + + + EF+ LG P+ +SA++
Sbjct: 96 TGIQPQDQEIAAMLRAS--GKPVILVVNKIDSVEQEV-NIYEFYGLGLGDPIGVSAVNLM 152
Query: 343 GTGELLDLVCSELKKVEV 360
G+LLD V S +K+V V
Sbjct: 153 NLGDLLDEVLSHIKEVPV 170
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 74/151 (49%), Gaps = 33/151 (21%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEH--EFMLVDTGGVLN 223
+A+VGRPNVGKS+L N L+G R IV D G TRD + + W EF+L+DT G+
Sbjct: 180 IALVGRPNVGKSSLTNALLGKERVIVSDMAGTTRDSI--DTHWKHDGTEFVLIDTAGMRR 237
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K I L +V R A AI+ S V + ++DG
Sbjct: 238 KGK-------------------IDLPVERYSVVR--------ALRAIDRSDVAVLVLDGV 270
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
G+T D++IA ++ ++ K I+ VNK +
Sbjct: 271 EGVTEQDKKIAGYIHES--GKGCIIIVNKWD 299
>gi|315651881|ref|ZP_07904884.1| ribosome-associated GTPase EngA [Lachnoanaerobaculum saburreum DSM
3986]
gi|315485883|gb|EFU76262.1| ribosome-associated GTPase EngA [Lachnoanaerobaculum saburreum DSM
3986]
Length = 443
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 105/194 (54%), Gaps = 32/194 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAI+GRPNVGKS LFN + G +IV D PGVTRDR+Y W + F L+DTGG+
Sbjct: 4 PVVAIIGRPNVGKSTLFNAIAGEPISIVKDTPGVTRDRIYADCTWLDMNFTLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P E++ + M E QA AIE + VI+F+ D +
Sbjct: 62 ----EP----------------------ESSDVILSQMRE-QAEIAIETADVIVFITDVR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL +D ++ D LRK+ K ++LAVNK +S K V EF++LG P+ ISA S
Sbjct: 95 QGLVDSDSKVCDMLRKSR--KPVVLAVNKVDSIAKFGNDVYEFYNLGIGDPVAISAASRL 152
Query: 343 GTGELLDLVCSELK 356
G G+LLD V K
Sbjct: 153 GIGDLLDAVAVHFK 166
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 94/197 (47%), Gaps = 38/197 (19%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
PR+AIVG+PNVGKS++ NRL G NR IV D G TRD + + E++ +DT G+
Sbjct: 179 PRIAIVGKPNVGKSSIINRLTGQNRVIVSDIAGTTRDAIDTVVVNNKQEYIFIDTAGLRR 238
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
SK + +I E +I T+ A+E + V+I ++D
Sbjct: 239 KSKVKEDI-ERYSIIRTV--------------------------TAVERADVVILVIDAS 271
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----LGFSPLP--- 335
G+T D +IA K II+AVNK + K V E+ + L F P
Sbjct: 272 EGVTEQDAKIAGIAHDR--GKGIIVAVNKWDLIEKNNKTVYEYTNDIKRVLSFMPYAEFI 329
Query: 336 -ISAISGTGTGELLDLV 351
ISA+SG +L +L+
Sbjct: 330 FISALSGQRLQKLFELI 346
>gi|260583467|ref|ZP_05851215.1| ribosome-associated GTPase EngA [Granulicatella elegans ATCC
700633]
gi|260158093|gb|EEW93161.1| ribosome-associated GTPase EngA [Granulicatella elegans ATCC
700633]
Length = 437
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 105/189 (55%), Gaps = 38/189 (20%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +AIVGRPNVGKS +FNR+VG +IV D GVTRDR+Y W H+F ++DTGG+
Sbjct: 4 PVIAIVGRPNVGKSTIFNRVVGERISIVEDIAGVTRDRIYSEGEWLGHQFHIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+I ++ P S I QA A+EE+ VIIFL +
Sbjct: 62 ------DITDE------------PFM----------SNIRMQAEIAMEEADVIIFLTSVK 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAIS 340
G+T+ DE IA L + +K ++LAVNK ++P R I +F++LGF P PIS
Sbjct: 94 EGVTSTDEHIAKMLYRT--NKPVLLAVNKVDNPELRSDIF---DFYALGFGEPFPISGSH 148
Query: 341 GTGTGELLD 349
G G G+LLD
Sbjct: 149 GLGLGDLLD 157
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 78/164 (47%), Gaps = 32/164 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHE--FMLVDTGGVL 222
R + +GRPNVGKS+L N ++G R IV + G TRD + SF E F ++DT G+
Sbjct: 177 RFSFIGRPNVGKSSLVNAMLGEERVIVSNVAGTTRDAI-DTSFTDEEGTIFKMIDTAGI- 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + + E +T + +V R A AIE S ++ +++
Sbjct: 235 ---RKKGRVFE---------------STEKYSVLR--------ALRAIERSDIVCVVLNA 268
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
+ G+ D++IA + + K +I+ VNK ++ K EF
Sbjct: 269 EEGIQEQDKKIAGYAHE--AGKGVIILVNKWDTLEKDNSTFKEF 310
>gi|421188916|ref|ZP_15646248.1| GTPase [Oenococcus oeni AWRIB419]
gi|399964249|gb|EJN98903.1| GTPase [Oenococcus oeni AWRIB419]
Length = 442
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 106/192 (55%), Gaps = 34/192 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+AIVGRPNVGKS LFNR+VG +AIV D GVTRDR+Y ++ W EF ++DTGG +S
Sbjct: 7 IAIVGRPNVGKSTLFNRIVGTRKAIVNDISGVTRDRLYEKAEWNGSEFSVIDTGG---IS 63
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
S +++ I+ QA AI+E+ IIF+VDG G
Sbjct: 64 TSNDVFIKE---------------------------IKEQAELAIKEADAIIFVVDGHNG 96
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+T D+ +A L ++ + I LAVN ++ + + + +F+SLG P PISA+ G G
Sbjct: 97 ITKDDQLVAKVLYRS--KQPIYLAVNHLDNIEQHDL-IYDFYSLGLGDPYPISAVHGNGV 153
Query: 345 GELLDLVCSELK 356
+LLD + K
Sbjct: 154 ADLLDDIVDAFK 165
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 82/165 (49%), Gaps = 34/165 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHE---FMLVDTGGV 221
++AI+GRPNVGKS++FN L+ NR+IV D G TRD + S + +++ F + DT G+
Sbjct: 182 KIAIIGRPNVGKSSIFNSLIKRNRSIVSDIQGTTRDTV--DSQFEDNQGNVFTISDTAGI 239
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
K ++E +T + AV R A AIE + VI+ ++D
Sbjct: 240 RKSGK----VIE---------------STEKYAVLR--------AQMAIESADVILVVID 272
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ IA + + +++ VNK ++ K + +F
Sbjct: 273 ASTGIQDQDKHIAGLATEE--GRAVVIVVNKWDAIEKDNYSMKQF 315
>gi|338811521|ref|ZP_08623735.1| GTP-binding protein Der [Acetonema longum DSM 6540]
gi|337276488|gb|EGO64911.1| GTP-binding protein Der [Acetonema longum DSM 6540]
Length = 442
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/176 (43%), Positives = 99/176 (56%), Gaps = 33/176 (18%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN++ +IV D PGVTRDR+Y + W HEF ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKIAKKRVSIVDDLPGVTRDRLYWDAEWLGHEFTMIDTGGIE- 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
S IM + + RQA AIEE+ VI+F+VD +
Sbjct: 63 -VDSNDFIM---------------------------ASVRRQAALAIEEADVILFVVDSK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISA 338
G+T ADEE+A LR + +K +ILAVNK +S + V EF+ LG PL +SA
Sbjct: 95 TGITTADEEVAALLR--HANKPVILAVNKVDSIKDS-EAVYEFYGLGLGEPLAVSA 147
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 106/221 (47%), Gaps = 41/221 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++A++GRPNVGKS+L N L+G R IV D PG TRD + ++L+DT G+
Sbjct: 178 KIAVIGRPNVGKSSLVNGLLGQERVIVSDIPGTTRDAIDTVLEKDGVSYVLIDTAGMRKK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+K + +E ++ ++ +A+E + V++ ++D
Sbjct: 238 AKIEDESIERYSVVRSL--------------------------SAVERADVVLMVLDAVD 271
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVS-----EFWSLGFSP-LP 335
+T D++IA + + K +I+ VNK E K ++ + E + ++P L
Sbjct: 272 RVTEQDKKIAGYAHE--AGKSLIIVVNKWDLVEKDSKTTLEYTQEIRNELAFMQYAPVLF 329
Query: 336 ISAISGTGTGELLDLV--CSELKKVEVCIGFL--LICNAIT 372
ISA++ +L+LV +E + + + L +I +A++
Sbjct: 330 ISALTKQRVHRVLELVNYVAEQRSMRIATNVLNQVISDAVS 370
>gi|153833535|ref|ZP_01986202.1| GTP-binding protein EngA [Vibrio harveyi HY01]
gi|148870186|gb|EDL69127.1| GTP-binding protein EngA [Vibrio harveyi HY01]
Length = 498
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 115/213 (53%), Gaps = 50/213 (23%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWG-EHEFMLVDTGG 220
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YG++ G EHEF+++DTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQARLGEEHEFIVIDTGG 60
Query: 221 VLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLV 280
+ T E +M Q+ AAI+E+ V++FLV
Sbjct: 61 I--------------------------DGTEEGVETKMAE----QSLAAIDEADVVLFLV 90
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSPL-PI 336
DG+AGLT +DE IA LRK ++K +L VNK + GI ++FW LG + I
Sbjct: 91 DGRAGLTPSDEAIAAHLRK--IEKPAMLVVNKID----GIDADAACADFWQLGVDDMYQI 144
Query: 337 SAISGTGTGELL---------DLVCSELKKVEV 360
+A G G LL DL+ SE ++ E+
Sbjct: 145 AAAHGRGVTALLERALAPFFDDLLASESEEGEI 177
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 99/220 (45%), Gaps = 40/220 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS L NR++G R +V D PG TRD +Y E++L+DT GV
Sbjct: 211 KLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRRR 270
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + E ++ T+ A+E++ V++ ++D +
Sbjct: 271 GRINETV-EKFSVVKTL--------------------------KAVEDANVVLLVIDARE 303
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSEFWSLGFSPLP----IS 337
++ D + + + I+LAVNK ++ K ++ LGF IS
Sbjct: 304 NISDQDLSLLGFALN--AGRSIVLAVNKWDGLDNEVKENVKKELDRRLGFVDFARIHFIS 361
Query: 338 AISGTGTGELLDLVCSELKKVEVCIGFLLICNAITKIFHI 377
A+ GTG G L + + K +G + +T+I +
Sbjct: 362 ALHGTGVGHLFESIQEAYKSATTRVG----TSVLTRIMKM 397
>gi|340787109|ref|YP_004752574.1| GTP-binding protein [Collimonas fungivorans Ter331]
gi|340552376|gb|AEK61751.1| GTP-binding protein [Collimonas fungivorans Ter331]
Length = 447
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/198 (38%), Positives = 105/198 (53%), Gaps = 37/198 (18%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+ P +A+VGRPNVGKS LFNRL A+V D PG+TRDR YG GE F+++DTGG
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPFLVIDTGGF 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
V+K IM ++A +Q A+ E+ ++IF+VD
Sbjct: 61 EPVAKD--GIMHEMA---------------------------KQTKQAVAEADIVIFIVD 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ GLT D+ I D+LRK+ + ++L VNK E K +EF+ LG P ISA
Sbjct: 92 GRQGLTPHDKTITDFLRKS--GRSVMLVVNKSEG-MKYTSVTAEFYELGMGDPYVISAAH 148
Query: 341 GTGTGEL----LDLVCSE 354
G G +L LDL S+
Sbjct: 149 GDGVTDLVEESLDLAFSQ 166
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 87/196 (44%), Gaps = 36/196 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVGRPNVGKS L N L+G R I D PG TRD + ++ L+DT G+
Sbjct: 182 KIAIVGRPNVGKSTLVNTLLGEERVIAFDMPGTTRDSIEIPFERDGKKYTLIDTAGIRRR 241
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K I E ++ T+ +I E+ V++ L+D Q
Sbjct: 242 GKVFEAI-EKFSVVKTL--------------------------QSISEANVVLLLLDAQQ 274
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCE---SPRKGIMQVSEFWSLGFSPLP----IS 337
++ D IA ++ + + +++ VNK + S R+ +++ L F IS
Sbjct: 275 DISEQDAHIAGFVLET--GRALVVGVNKWDGLTSDRRDEIKMDMDRKLNFLSFAKFHFIS 332
Query: 338 AISGTGTGELLDLVCS 353
A+ TG L+ + S
Sbjct: 333 ALKSTGITPLMKSIDS 348
>gi|323526574|ref|YP_004228727.1| ribosome-associated GTPase EngA [Burkholderia sp. CCGE1001]
gi|407714021|ref|YP_006834586.1| GTPase Der [Burkholderia phenoliruptrix BR3459a]
gi|323383576|gb|ADX55667.1| ribosome-associated GTPase EngA [Burkholderia sp. CCGE1001]
gi|407236205|gb|AFT86404.1| GTPase Der [Burkholderia phenoliruptrix BR3459a]
Length = 445
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 102/189 (53%), Gaps = 33/189 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+ P +A+VGRPNVGKS LFNRL A+V D PG+TRDR YG GE +++VDTGG
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRTGERPYLVVDTGGF 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
V+K I+ ++A RQ A+EES +++F+VD
Sbjct: 61 EPVAKD--GILHEMA---------------------------RQTRQAVEESDIVVFIVD 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ GL D+ IAD+LRK + I L VNK E + + ++F+ LG P ISA
Sbjct: 92 GRNGLAPQDKVIADYLRKT--GRPIFLVVNKAEGMKYSAV-AADFYELGLGDPRAISAAH 148
Query: 341 GTGTGELLD 349
G G E+++
Sbjct: 149 GDGVTEMIN 157
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 69/151 (45%), Gaps = 29/151 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVGRPNVGKS L N LVG R I D PG TRD +Y + L+DT G+
Sbjct: 181 KIAIVGRPNVGKSTLINALVGEERVIAFDMPGTTRDSIYVDFERQGKPYTLIDTAGLRRR 240
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K I E ++ T+ +I ++ V+I L+D +
Sbjct: 241 GKVFEAI-EKFSVVKTL--------------------------QSISDANVVILLLDARQ 273
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCES 315
++ D IA ++ + + +++ VNK +
Sbjct: 274 DISDQDAHIAGFVVEQ--GRALVVGVNKWDG 302
>gi|269962406|ref|ZP_06176756.1| GTP-binding protein [Vibrio harveyi 1DA3]
gi|424045074|ref|ZP_17782641.1| ribosome-associated GTPase EngA [Vibrio cholerae HENC-03]
gi|269832902|gb|EEZ87011.1| GTP-binding protein [Vibrio harveyi 1DA3]
gi|408886928|gb|EKM25578.1| ribosome-associated GTPase EngA [Vibrio cholerae HENC-03]
Length = 498
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 116/213 (54%), Gaps = 50/213 (23%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGG 220
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YG++ GE HEF+++DTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQARLGEEHEFIVIDTGG 60
Query: 221 VLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLV 280
+ T E +M +Q+ AAI+E+ V++FLV
Sbjct: 61 ID--------------------------GTEEGVETKMA----QQSLAAIDEADVVLFLV 90
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSPL-PI 336
DG+AGLT +DE IA LRK ++K +L VNK + GI ++FW LG + I
Sbjct: 91 DGRAGLTPSDEAIAAHLRK--IEKPAMLVVNKID----GIDADAACADFWQLGVDDMYQI 144
Query: 337 SAISGTGTGELL---------DLVCSELKKVEV 360
+A G G LL DL+ SE ++ E+
Sbjct: 145 AAAHGRGVTALLERALAPFFDDLLASESEEGEI 177
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 40/220 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS L NR++G R +V D PG TRD +Y E++L+DT GV
Sbjct: 211 KLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRRR 270
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + E ++ T+ A+E++ V++ ++D +
Sbjct: 271 GRINETV-EKFSVVKTL--------------------------KAVEDANVVLLVIDARE 303
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF---WSLGFSPLP----IS 337
++ D + + + I+LAVNK + + + + LGF IS
Sbjct: 304 NISDQDLSLLGFALN--AGRSIVLAVNKWDGLDNDVKENVKKELDRRLGFVDFARIHFIS 361
Query: 338 AISGTGTGELLDLVCSELKKVEVCIGFLLICNAITKIFHI 377
A+ GTG G L + + K +G + +T+I +
Sbjct: 362 ALHGTGVGHLFESIQEAYKSATTRVG----TSVLTRIMKM 397
>gi|269103271|ref|ZP_06155968.1| GTP-binding protein EngA [Photobacterium damselae subsp. damselae
CIP 102761]
gi|268163169|gb|EEZ41665.1| GTP-binding protein EngA [Photobacterium damselae subsp. damselae
CIP 102761]
Length = 499
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 104/192 (54%), Gaps = 40/192 (20%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YGR+ EHEF+++DTGG+
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEINEHEFIVIDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+G T E +M Q+ AIEE+ V++FLVD
Sbjct: 61 ----------------------DG----TEEGVETKMAE----QSLMAIEEADVVLFLVD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSPL-PIS 337
G+AGLTAADE IA LR +K L VNK + GI ++FW LG + I+
Sbjct: 91 GRAGLTAADEAIAKHLRSR--NKPTFLVVNKID----GIDADSACADFWKLGADEMHQIA 144
Query: 338 AISGTGTGELLD 349
A G L++
Sbjct: 145 ASQNRGVTALME 156
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 92/195 (47%), Gaps = 36/195 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS L NR++G R +V D PG TRD +Y E++L+DT G+
Sbjct: 212 KLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGQEYVLIDTAGI--- 268
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + N+ E + + I Q A+E++ V++ ++D +
Sbjct: 269 -RRRKNMHEAVEKFSVI-----------------------QTLKAVEDANVVLLIIDARE 304
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSEFWSLGFSPLP----IS 337
++ D + + + +++AVNK ++ K ++ LGF IS
Sbjct: 305 NISDQDLSLLGFALN--AGRSLVIAVNKWDGLDNDVKERVKTELDRRLGFVDFARIHFIS 362
Query: 338 AISGTGTGELLDLVC 352
A+ GTG G L + V
Sbjct: 363 ALHGTGVGHLYESVV 377
>gi|342218626|ref|ZP_08711236.1| ribosome biogenesis GTPase Der [Megasphaera sp. UPII 135-E]
gi|341589496|gb|EGS32771.1| ribosome biogenesis GTPase Der [Megasphaera sp. UPII 135-E]
Length = 443
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 106/194 (54%), Gaps = 32/194 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN +V +IV D PGVTRDR+Y + W HEF ++DTGG+
Sbjct: 4 PLVAVVGRPNVGKSTLFNAIVKKRISIVEDIPGVTRDRIYFDAEWLGHEFTMIDTGGIEF 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
V + + + S + QA AI E+ VI+F+VDG+
Sbjct: 64 VDEKE----------------------------HIFSSMRYQAELAIREADVILFVVDGK 95
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+ DEE+A LR + K +IL VNK +S + M + EF+ LG P+ +SAI+
Sbjct: 96 TGIQPQDEEVATILRTS--GKPVILVVNKIDSVEQE-MNMYEFYGLGIGDPIGVSAINLM 152
Query: 343 GTGELLDLVCSELK 356
G+LLD V ++
Sbjct: 153 NLGDLLDEVLKHIQ 166
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 73/149 (48%), Gaps = 29/149 (19%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+A+VGRPNVGKS++ N L+G R IV + PG TRD + + F+L+DT G+ +
Sbjct: 180 IALVGRPNVGKSSMTNALLGQERVIVSNVPGTTRDSIDTHWSYEGTPFVLIDTAGMRRKA 239
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
K + + +V R A A++ S V + ++DG G
Sbjct: 240 K-------------------VDIPVERYSVVR--------ALRAVDRSDVAVLMLDGTEG 272
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCE 314
+T D++IA ++ + K I+ VNK +
Sbjct: 273 VTEQDKKIAGYVHE--AGKGCIIVVNKWD 299
>gi|306820449|ref|ZP_07454085.1| ribosome-associated GTPase EngA [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|402309399|ref|ZP_10828392.1| ribosome-associated GTPase EngA [Eubacterium sp. AS15]
gi|304551524|gb|EFM39479.1| ribosome-associated GTPase EngA [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|400372366|gb|EJP25310.1| ribosome-associated GTPase EngA [Eubacterium sp. AS15]
Length = 439
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/198 (40%), Positives = 105/198 (53%), Gaps = 33/198 (16%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRLVG +IV D PGVTRDR++ W + F L+DTG
Sbjct: 5 VAIVGRPNVGKSTLFNRLVGEKISIVEDTPGVTRDRIFADVNWLTYTFTLIDTG------ 58
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
GI T E +P+M+ +QA AI+ S VI+F++DG+ G
Sbjct: 59 -------------------GIETDTEEM----IPAMMRKQAQVAIDMSDVIMFVLDGKNG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGTGT 344
L D E+ LRK+ K +IL VNK + K +F+ LGF + +SA G G
Sbjct: 96 LHPQDFEVGTMLRKS--KKPVILVVNKVDGS-KLPDDYYDFYQLGFDDMYAVSASQGLGI 152
Query: 345 GELLDLVCSELKKVEVCI 362
G+LLD V K E+ I
Sbjct: 153 GDLLDEVVGLFPKDELEI 170
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VAIVGRPN GKS++ N ++G R IV G TRD + + + +DT G+
Sbjct: 177 KVAIVGRPNAGKSSILNAIIGEERTIVSPIAGTTRDAIDEKCEIDGKSYTFIDTAGIRKK 236
Query: 225 SKSQPNI 231
+K NI
Sbjct: 237 NKIFDNI 243
>gi|388601634|ref|ZP_10160030.1| GTP-binding protein Der [Vibrio campbellii DS40M4]
Length = 498
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 115/213 (53%), Gaps = 50/213 (23%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWG-EHEFMLVDTGG 220
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YG++ G EHEF+++DTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQARLGEEHEFIVIDTGG 60
Query: 221 VLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLV 280
+ T E +M Q+ AAI+E+ V++FLV
Sbjct: 61 I--------------------------DGTEEGVETKMAE----QSLAAIDEADVVLFLV 90
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSPL-PI 336
DG+AGLT +DE IA LRK ++K +L VNK + GI ++FW LG + I
Sbjct: 91 DGRAGLTPSDEAIAAHLRK--IEKPAMLVVNKID----GIDADAACADFWQLGVDDMYQI 144
Query: 337 SAISGTGTGELL---------DLVCSELKKVEV 360
+A G G LL DL+ SE ++ E+
Sbjct: 145 AAAHGRGVTALLERALAPFFDDLLASESEEGEI 177
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 99/220 (45%), Gaps = 40/220 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS L NR++G R +V D PG TRD +Y E++L+DT GV
Sbjct: 211 KLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRRR 270
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + E ++ T+ A+E++ V++ ++D +
Sbjct: 271 GRINETV-EKFSVVKTL--------------------------KAVEDANVVLLVIDARE 303
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSEFWSLGFSPLP----IS 337
++ D + + + I+LAVNK ++ K ++ LGF IS
Sbjct: 304 NISDQDLSLLGFALN--AGRSIVLAVNKWDGLDNEVKENVKKELDRRLGFVDFARIHFIS 361
Query: 338 AISGTGTGELLDLVCSELKKVEVCIGFLLICNAITKIFHI 377
A+ GTG G L + + K +G + +T+I +
Sbjct: 362 ALHGTGVGHLFESIQEAYKSATTRVG----TSVLTRIMKM 397
>gi|116491039|ref|YP_810583.1| GTPase [Oenococcus oeni PSU-1]
gi|290890519|ref|ZP_06553594.1| hypothetical protein AWRIB429_0984 [Oenococcus oeni AWRIB429]
gi|419758814|ref|ZP_14285126.1| GTPase [Oenococcus oeni AWRIB304]
gi|419857722|ref|ZP_14380426.1| GTPase [Oenococcus oeni AWRIB202]
gi|419859511|ref|ZP_14382165.1| GTPase [Oenococcus oeni DSM 20252 = AWRIB129]
gi|421185437|ref|ZP_15642848.1| GTPase [Oenococcus oeni AWRIB318]
gi|421189701|ref|ZP_15647015.1| GTPase [Oenococcus oeni AWRIB422]
gi|421190841|ref|ZP_15648125.1| GTPase [Oenococcus oeni AWRIB548]
gi|421193643|ref|ZP_15650889.1| GTPase [Oenococcus oeni AWRIB553]
gi|421195317|ref|ZP_15652526.1| GTPase [Oenococcus oeni AWRIB568]
gi|421197430|ref|ZP_15654605.1| GTPase [Oenococcus oeni AWRIB576]
gi|116091764|gb|ABJ56918.1| Predicted GTPase [Oenococcus oeni PSU-1]
gi|290479915|gb|EFD88564.1| hypothetical protein AWRIB429_0984 [Oenococcus oeni AWRIB429]
gi|399904269|gb|EJN91725.1| GTPase [Oenococcus oeni AWRIB304]
gi|399964618|gb|EJN99259.1| GTPase [Oenococcus oeni AWRIB318]
gi|399971802|gb|EJO06041.1| GTPase [Oenococcus oeni AWRIB553]
gi|399972791|gb|EJO06990.1| GTPase [Oenococcus oeni AWRIB422]
gi|399973537|gb|EJO07702.1| GTPase [Oenococcus oeni AWRIB548]
gi|399975039|gb|EJO09107.1| GTPase [Oenococcus oeni AWRIB576]
gi|399976023|gb|EJO10052.1| GTPase [Oenococcus oeni AWRIB568]
gi|410496528|gb|EKP88011.1| GTPase [Oenococcus oeni DSM 20252 = AWRIB129]
gi|410497499|gb|EKP88972.1| GTPase [Oenococcus oeni AWRIB202]
Length = 442
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 106/192 (55%), Gaps = 34/192 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+AIVGRPNVGKS LFNR+VG +AIV D GVTRDR+Y ++ W EF ++DTGG +S
Sbjct: 7 IAIVGRPNVGKSTLFNRIVGTRKAIVNDISGVTRDRLYEKAEWNGSEFSVIDTGG---IS 63
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
S +++ I+ QA AI+E+ IIF+VDG G
Sbjct: 64 ASNDVFIKE---------------------------IKEQAELAIKEADAIIFVVDGHNG 96
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+T D+ +A L ++ + I LAVN ++ + + + +F+SLG P PISA+ G G
Sbjct: 97 ITKDDQLVAKVLYRS--KQPIYLAVNHLDNIEQHDL-IYDFYSLGLGDPYPISAVHGNGV 153
Query: 345 GELLDLVCSELK 356
+LLD + K
Sbjct: 154 ADLLDDIVDAFK 165
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 82/165 (49%), Gaps = 34/165 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHE---FMLVDTGGV 221
++AI+GRPNVGKS++FN L+ NR+IV D G TRD + S + +++ F + DT G+
Sbjct: 182 KIAIIGRPNVGKSSIFNSLIKRNRSIVSDIQGTTRDTV--DSQFEDNQGNVFTISDTAGI 239
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
K ++E +T + AV R A AIE + VI+ ++D
Sbjct: 240 RKSGK----VIE---------------STEKYAVLR--------AQMAIESADVILVVID 272
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ IA + + +++ VNK ++ K + +F
Sbjct: 273 ASTGIQDQDKHIAGLATEE--GRAVVIVVNKWDAIEKDNYSMKQF 315
>gi|419718327|ref|ZP_14245650.1| ribosome-associated GTPase EngA [Lachnoanaerobaculum saburreum
F0468]
gi|383305498|gb|EIC96860.1| ribosome-associated GTPase EngA [Lachnoanaerobaculum saburreum
F0468]
Length = 443
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 105/194 (54%), Gaps = 32/194 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAI+GRPNVGKS LFN + G +IV D PGVTRDR+Y W + F L+DTGG+
Sbjct: 4 PVVAIIGRPNVGKSTLFNAIAGEPISIVKDTPGVTRDRIYADCTWLDMNFTLIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P E++ + M E QA AIE + VI+F+ D +
Sbjct: 62 ----EP----------------------ESSDVILSQMRE-QAEIAIETADVIVFITDVR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL +D ++ D LRK+ K ++LAVNK +S K V EF++LG P+ ISA S
Sbjct: 95 QGLVDSDSKVCDMLRKSR--KPVVLAVNKVDSIAKFGNDVYEFYNLGIGDPVAISAASRL 152
Query: 343 GTGELLDLVCSELK 356
G G+LLD V K
Sbjct: 153 GIGDLLDAVAVHFK 166
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 94/197 (47%), Gaps = 38/197 (19%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
PR+AIVG+PNVGKS++ NRL G NR IV D G TRD + E++ +DT G+
Sbjct: 179 PRIAIVGKPNVGKSSIINRLTGQNRVIVSDIAGTTRDAIDTVVVNNRQEYVFIDTAGLRR 238
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
SK + +I E +I T+ A+E + V+I ++D +
Sbjct: 239 KSKVKEDI-ERYSIIRTV--------------------------TAVERADVVILVIDAR 271
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----LGFSPLP--- 335
G+T D +IA K II+AVNK + K V E+ + L F P
Sbjct: 272 EGVTEQDAKIAGIAHDR--GKGIIVAVNKWDLIEKNNKTVYEYTNDIKRVLSFMPYAEFI 329
Query: 336 -ISAISGTGTGELLDLV 351
ISA+SG +L +L+
Sbjct: 330 FISALSGQRLQKLFELI 346
>gi|295676899|ref|YP_003605423.1| ribosome-associated GTPase EngA [Burkholderia sp. CCGE1002]
gi|295436742|gb|ADG15912.1| ribosome-associated GTPase EngA [Burkholderia sp. CCGE1002]
Length = 445
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 102/189 (53%), Gaps = 33/189 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+ P +A+VGRPNVGKS LFNRL A+V D PG+TRDR YG GE +++VDTGG
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRTGERPYLVVDTGGF 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
V+K I+ ++A RQ A+EES V++F+VD
Sbjct: 61 EPVAKD--GILHEMA---------------------------RQTRQAVEESDVVVFIVD 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ GL D+ IAD+LRK + + I L VNK E K ++F+ LG P ISA
Sbjct: 92 GRNGLAPQDKSIADYLRK--VGRPIFLVVNKAEG-MKYTNVAADFYELGLGDPRAISAAH 148
Query: 341 GTGTGELLD 349
G G ++++
Sbjct: 149 GDGVTDMIN 157
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 69/151 (45%), Gaps = 29/151 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVGRPNVGKS L N LVG R I D PG TRD +Y + L+DT G+
Sbjct: 181 KIAIVGRPNVGKSTLINALVGEERVIAFDMPGTTRDSIYVDFERNGKPYTLIDTAGLRRR 240
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K I E ++ T+ +I ++ V+I L+D +
Sbjct: 241 GKVFEAI-EKFSVVKTL--------------------------QSISDANVVILLLDARQ 273
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCES 315
++ D IA ++ + + +++ VNK +
Sbjct: 274 DISDQDAHIAGFVVEQ--GRALVVGVNKWDG 302
>gi|350530365|ref|ZP_08909306.1| GTP-binding protein Der [Vibrio rotiferianus DAT722]
Length = 498
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 115/213 (53%), Gaps = 50/213 (23%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWG-EHEFMLVDTGG 220
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YG++ G EHEF+++DTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQARLGEEHEFIVIDTGG 60
Query: 221 VLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLV 280
+ T E +M Q+ AAI+E+ V++FLV
Sbjct: 61 I--------------------------DGTEEGVETKMAE----QSLAAIDEADVVLFLV 90
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSPL-PI 336
DG+AGLT +DE IA LRK ++K +L VNK + GI ++FW LG + I
Sbjct: 91 DGRAGLTPSDEAIAAHLRK--IEKPAMLVVNKID----GIDADAACADFWQLGVDDMYQI 144
Query: 337 SAISGTGTGELL---------DLVCSELKKVEV 360
+A G G LL DL+ SE ++ E+
Sbjct: 145 AAAHGRGVTALLERALAPFFDDLLASESEEGEI 177
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 99/220 (45%), Gaps = 40/220 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS L NR++G R +V D PG TRD +Y E++L+DT GV
Sbjct: 211 KLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRRR 270
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + E ++ T+ A+E++ V++ ++D +
Sbjct: 271 GRINETV-EKFSVVKTL--------------------------KAVEDANVVLLVIDARE 303
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSEFWSLGFSPLP----IS 337
++ D + + + I+LAVNK ++ K ++ LGF IS
Sbjct: 304 NISDQDLSLLGFALN--AGRSIVLAVNKWDGLDNEVKENVKKELDRRLGFVDFARIHFIS 361
Query: 338 AISGTGTGELLDLVCSELKKVEVCIGFLLICNAITKIFHI 377
A+ GTG G L + + K +G + +T+I +
Sbjct: 362 ALHGTGVGHLFESIQEAYKSATTRVG----TSVLTRIMKM 397
>gi|421186315|ref|ZP_15643708.1| GTPase [Oenococcus oeni AWRIB418]
gi|399967268|gb|EJO01750.1| GTPase [Oenococcus oeni AWRIB418]
Length = 442
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 106/192 (55%), Gaps = 34/192 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+AIVGRPNVGKS LFNR+VG +AIV D GVTRDR+Y ++ W EF ++DTGG +S
Sbjct: 7 IAIVGRPNVGKSTLFNRIVGTRKAIVNDISGVTRDRLYEKAEWNGSEFSVIDTGG---IS 63
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
S +++ I+ QA AI+E+ IIF+VDG G
Sbjct: 64 ASNDVFIKE---------------------------IKEQAELAIKEADAIIFVVDGHNG 96
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+T D+ +A L ++ + I LAVN ++ + + + +F+SLG P PISA+ G G
Sbjct: 97 ITKDDQLVAKVLYRS--KQPIYLAVNHLDNIEQHDL-IYDFYSLGLGDPYPISAVHGNGV 153
Query: 345 GELLDLVCSELK 356
+LLD + K
Sbjct: 154 ADLLDDIVDAFK 165
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 82/165 (49%), Gaps = 34/165 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHE---FMLVDTGGV 221
++AI+GRPNVGKS++FN L+ NR+IV D G TRD + S + +++ F + DT G+
Sbjct: 182 KIAIIGRPNVGKSSIFNSLIKRNRSIVSDIQGTTRDTV--DSQFEDNQGNVFTISDTAGI 239
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
K ++E +T + AV R A AIE + VI+ ++D
Sbjct: 240 RKSGK----VIE---------------STEKYAVLR--------AQMAIESADVILVVID 272
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ IA + + +++ VNK ++ K + +F
Sbjct: 273 ASTGIQDQDKHIAGLATEE--GRAVVIVVNKWDAIEKDNYSMKQF 315
>gi|392397706|ref|YP_006434307.1| ribosome-associated GTPase EngA [Flexibacter litoralis DSM 6794]
gi|390528784|gb|AFM04514.1| ribosome-associated GTPase EngA [Flexibacter litoralis DSM 6794]
Length = 435
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 103/194 (53%), Gaps = 33/194 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRLV +AI+ DE GVTRDR YG+S W + F ++DTGG +
Sbjct: 5 VAIVGRPNVGKSTLFNRLVEERKAIMHDESGVTRDRHYGQSEWNGNFFTVIDTGGYV--- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+G E + I Q A+EE+ VI+F+VD G
Sbjct: 62 ---------------VGSEDV-----------FEKAIREQVEIAMEEASVILFMVDTHVG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLP-ISAISGTGT 344
+ DEE LR++ K I L NK E+ +EF++LG L +S+ +GTGT
Sbjct: 96 VNPLDEEFVKVLRRS--RKPIYLVANKVENFEHR-TNATEFYNLGIGELYCVSSQTGTGT 152
Query: 345 GELLDLVCSELKKV 358
G+LLD V +++
Sbjct: 153 GDLLDDVVKNFEEI 166
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 43/73 (58%)
Query: 159 PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDT 218
P LP++AI+GRPNVGKS+ N L+G R IV D G TRD + EF+L DT
Sbjct: 171 PNAGLPKIAILGRPNVGKSSFLNILLGEERTIVSDISGTTRDSIDTHYKAYGQEFILTDT 230
Query: 219 GGVLNVSKSQPNI 231
G+ ++ + NI
Sbjct: 231 AGMRRKARVKENI 243
>gi|307564580|ref|ZP_07627120.1| ribosome-associated GTPase EngA [Prevotella amnii CRIS 21A-A]
gi|307346738|gb|EFN92035.1| ribosome-associated GTPase EngA [Prevotella amnii CRIS 21A-A]
Length = 437
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/195 (39%), Positives = 107/195 (54%), Gaps = 33/195 (16%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRL AIV D G TRDR YG+ W EF +VDTGG V
Sbjct: 5 VAIVGRPNVGKSTLFNRLTKTRHAIVSDVAGTTRDRQYGKCLWNGREFSVVDTGGW--VV 62
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
KS +I ED I +Q A EE+ +++FLVD + G
Sbjct: 63 KSD-DIFED--------------------------AIRQQVLVATEEADIVLFLVDTETG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+T DE++A LR+ + ++L NK ++ + +EF+ LG P+ ISA +G+GT
Sbjct: 96 ITDWDEDVALILRRTNLP--VLLVANKVDNMGEYYTS-AEFYKLGLGDPICISAQTGSGT 152
Query: 345 GELLDLVCSELKKVE 359
G+LLD++ ++ V+
Sbjct: 153 GDLLDILLEKMTDVQ 167
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 29/152 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
+PR A+VGRPN GKS+L N +G R IV + G TRD +Y R +F LVDT G+
Sbjct: 175 IPRFAVVGRPNAGKSSLINSFIGEERNIVTEIAGTTRDSIYTRYNKFGFDFYLVDTAGI- 233
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + + EDL + + ++ +IE S V I ++D
Sbjct: 234 ---RRKNKVSEDLEFYSVM-----------------------RSIRSIENSDVCILMIDA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
G+ + D I +++N +K +++ VNK +
Sbjct: 268 TRGIESQDMNIFQLIQRN--NKSLVVVVNKWD 297
>gi|424032156|ref|ZP_17771576.1| ribosome-associated GTPase EngA [Vibrio cholerae HENC-01]
gi|424042347|ref|ZP_17780087.1| ribosome-associated GTPase EngA [Vibrio cholerae HENC-02]
gi|408876161|gb|EKM15290.1| ribosome-associated GTPase EngA [Vibrio cholerae HENC-01]
gi|408889698|gb|EKM28043.1| ribosome-associated GTPase EngA [Vibrio cholerae HENC-02]
Length = 498
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 115/213 (53%), Gaps = 50/213 (23%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWG-EHEFMLVDTGG 220
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YG++ G EHEF+++DTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQARLGEEHEFIVIDTGG 60
Query: 221 VLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLV 280
+ T E +M Q+ AAI+E+ V++FLV
Sbjct: 61 I--------------------------DGTEEGVETKMAE----QSLAAIDEADVVLFLV 90
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSPL-PI 336
DG+AGLT +DE IA LRK ++K +L VNK + GI ++FW LG + I
Sbjct: 91 DGRAGLTPSDEAIAAHLRK--IEKPAMLVVNKID----GIDADAACADFWQLGVDDMYQI 144
Query: 337 SAISGTGTGELL---------DLVCSELKKVEV 360
+A G G LL DL+ SE ++ E+
Sbjct: 145 AAAHGRGVTALLERALAPFFDDLLASESEEGEI 177
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 99/220 (45%), Gaps = 40/220 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS L NR++G R +V D PG TRD +Y E++L+DT GV
Sbjct: 211 KLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRRR 270
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + E ++ T+ A+E++ V++ ++D +
Sbjct: 271 GRINETV-EKFSVVKTL--------------------------KAVEDANVVLLVIDARE 303
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSEFWSLGFSPLP----IS 337
++ D + + + I+LAVNK ++ K ++ LGF IS
Sbjct: 304 NISDQDLSLLGFALN--AGRSIVLAVNKWDGLDNEVKENVKKELDRRLGFVDFARIHFIS 361
Query: 338 AISGTGTGELLDLVCSELKKVEVCIGFLLICNAITKIFHI 377
A+ GTG G L + + K +G + +T+I +
Sbjct: 362 ALHGTGVGHLFESIQEAYKSATTRVG----TSVLTRIMKM 397
>gi|300726752|ref|ZP_07060182.1| ribosome-associated GTPase EngA [Prevotella bryantii B14]
gi|299775865|gb|EFI72445.1| ribosome-associated GTPase EngA [Prevotella bryantii B14]
Length = 437
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 104/191 (54%), Gaps = 33/191 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNR RAIV D G TRDR YG+ W +F +VDTGG V
Sbjct: 5 VAIVGRPNVGKSTLFNRFTQSRRAIVSDTAGTTRDRQYGKVSWNGKDFSVVDTGGW--VV 62
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
KS +I ED I RQ A EE+ +++FLVD + G
Sbjct: 63 KSD-DIFED--------------------------AIRRQVLVATEEADLVLFLVDTETG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+T D ++A LR+ + IIL NK ++ + + +EF+ LG P+ ISA +G GT
Sbjct: 96 VTDWDVDVAKILRRAKLP--IILVANKVDNSGE-YYEAAEFYKLGLGDPVCISAATGGGT 152
Query: 345 GELLDLVCSEL 355
G+LLD++ ++
Sbjct: 153 GDLLDMILEKM 163
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 76/155 (49%), Gaps = 29/155 (18%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
E +PR A+VGRPN GKS++ N +G +R IV + G TRD +Y + +F LVDT
Sbjct: 172 EEDIPRFAVVGRPNAGKSSIINAFIGEDRNIVTEIAGTTRDSIYTKYDKFGFDFYLVDTA 231
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G+ + + + EDL + + ++ AIE S V I +
Sbjct: 232 GI----RRKNKVTEDLEFYSVM-----------------------RSIRAIENSDVCILM 264
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
+D G+ A D I +++N +K +++ VNK +
Sbjct: 265 LDATRGIEAQDMNIFQLIQRN--NKSLVVVVNKWD 297
>gi|313893405|ref|ZP_07826977.1| ribosome biogenesis GTPase Der [Veillonella sp. oral taxon 158 str.
F0412]
gi|313442046|gb|EFR60466.1| ribosome biogenesis GTPase Der [Veillonella sp. oral taxon 158 str.
F0412]
Length = 444
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 104/187 (55%), Gaps = 31/187 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN +V +IV D PGVTRDR+Y + W EF ++DTG
Sbjct: 4 PLVAVVGRPNVGKSTLFNAIVNKRISIVEDIPGVTRDRIYFDAEWLNREFTMIDTG---- 59
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
GI T + V +P M+ QA AIEE+ VI+F+VDG+
Sbjct: 60 ---------------------GIEFITENSHV--IPKMMRLQAELAIEEADVILFVVDGK 96
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+ ADEE+ + LR + K ++L VNK +S + + EF++LG P+ ISA +
Sbjct: 97 QGIVPADEEVGNILRAS--GKPVVLVVNKIDSVNQE-PNIYEFYNLGLGDPIGISAKNLM 153
Query: 343 GTGELLD 349
G+LLD
Sbjct: 154 NLGDLLD 160
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 107/222 (48%), Gaps = 44/222 (19%)
Query: 157 NVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFW--GEHEFM 214
NV + VAI+GRPNVGKS+L N L+G +R IV D G TRD + ++W G+ +F+
Sbjct: 172 NVDDEDTIHVAIIGRPNVGKSSLTNALLGQDRVIVSDVAGTTRDSI--DTYWTHGDQKFV 229
Query: 215 LVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESC 274
L+DT G+ SK I A ++ R + +++ S
Sbjct: 230 LIDTAGMRRKSK-------------------IDEAVERYSIVR--------SLRSVDRSD 262
Query: 275 VIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSE--FWSL 329
+++ ++D Q G+T D++IA + + K +++ VNK E K ++ +E + L
Sbjct: 263 IVVLVLDAQDGVTEQDKKIAGYAYE--AGKGVVIVVNKWDLVEKDDKTTLRFTEDIYEEL 320
Query: 330 GFSPL-PI---SAISGTGTGELLDLV--CSELKKVEVCIGFL 365
GF PI SA++ L D++ SE + V G L
Sbjct: 321 GFLQFAPILFASALTKQRIHRLADMLKFVSEQQYRRVSTGTL 362
>gi|307700914|ref|ZP_07637939.1| ribosome-associated GTPase EngA [Mobiluncus mulieris FB024-16]
gi|307613909|gb|EFN93153.1| ribosome-associated GTPase EngA [Mobiluncus mulieris FB024-16]
Length = 524
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/196 (41%), Positives = 105/196 (53%), Gaps = 34/196 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS L NR++G A+V+DEPGVTRDR+ + W +F L+DTGG
Sbjct: 89 PTVAIVGRPNVGKSTLVNRILGRRVAVVLDEPGVTRDRVIYDADWNGRDFHLIDTGG--- 145
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+G++G+ + AVA QA AIE + V +F+VD
Sbjct: 146 ---------------WDVGVKGL-----DKAVA-------TQAEIAIEMADVSLFVVDAN 178
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G TA DE + LR + K +IL NK +S R S W+LG P PISA+ G
Sbjct: 179 VGATATDEAMMRLLRAS--KKPVILVANKVDSERAE-ADASGLWNLGLGEPYPISALHGR 235
Query: 343 GTGELLDLVCSELKKV 358
G GELLD++ L V
Sbjct: 236 GVGELLDVLLDALPTV 251
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 76/156 (48%), Gaps = 29/156 (18%)
Query: 159 PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDT 218
P PRVA+VGRPNVGKS+L N L G R++V D PG TRD + E++ VDT
Sbjct: 259 PADSTPRVALVGRPNVGKSSLLNSLAGSGRSVVSDTPGTTRDPVDEVLELDGKEWVFVDT 318
Query: 219 GGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIF 278
G+ I T+G A S++ +A +AIE + V +
Sbjct: 319 AGIKR------------RIKQTVG-------------ADYYSVL--RAQSAIESAEVALV 351
Query: 279 LVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
L+DG L+ D ++ + + ++ + ++L NK +
Sbjct: 352 LLDGGEPLSEQDVKVVNLVVES--GRALVLVNNKWD 385
>gi|302039510|ref|YP_003799832.1| GTP-binding protein EngA [Candidatus Nitrospira defluvii]
gi|300607574|emb|CBK43907.1| GTP-binding protein EngA [Candidatus Nitrospira defluvii]
Length = 464
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 107/194 (55%), Gaps = 33/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +A++GRPNVGKS LFNR++G AIV D PGVTRDR Y S + F LVDTGG+
Sbjct: 28 LPIIALIGRPNVGKSTLFNRILGTRAAIVDDVPGVTRDRNYADSTYRNRRFRLVDTGGL- 86
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
P E M S+I +Q+ AI E+ +++ ++D
Sbjct: 87 -----DPTASEG-----------------------MLSLIRQQSQLAIAEADILVLVLDA 118
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISG 341
++GLT ADEE+ LR + DK + +NK ++P+ + V++F+ LG L P+SA G
Sbjct: 119 RSGLTPADEEVVQTLRGS--DKPVYYVINKIDTPKADPL-VADFYRLGQEQLYPLSAEHG 175
Query: 342 TGTGELLDLVCSEL 355
G ELLD + S +
Sbjct: 176 IGVAELLDDLFSHM 189
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 75/151 (49%), Gaps = 29/151 (19%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
PR+AIVGRPNVGKS L N ++G R +V + PG TRD + + + + +++L DT G+
Sbjct: 202 PRIAIVGRPNVGKSTLVNSVLGEARVVVSNVPGTTRDPVDSVATFKDRQYVLTDTAGIRR 261
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ + G+EG +A ++ AI S + + L+D +
Sbjct: 262 RGRVER------------GIEGYSVA---------------RSLRAIGRSDIAVLLLDAE 294
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
G+T D +IA + K + IL VNK +
Sbjct: 295 EGVTEQDTKIAGLVLKQ--GRACILIVNKWD 323
>gi|209521123|ref|ZP_03269851.1| small GTP-binding protein [Burkholderia sp. H160]
gi|209498433|gb|EDZ98560.1| small GTP-binding protein [Burkholderia sp. H160]
Length = 445
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 103/189 (54%), Gaps = 33/189 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+ P +A+VGRPNVGKS LFNRL A+V D PG+TRDR YG GE +++VDTGG
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRAGERPYLVVDTGGF 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
V+K I+ ++A RQ A+EES V++F+VD
Sbjct: 61 EPVAKD--GILHEMA---------------------------RQTRQAVEESDVVVFIVD 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ GL D+ IAD+LRK + + I L VNK E + + ++F+ LG P ISA
Sbjct: 92 GRNGLAPQDKSIADYLRK--VGRPIFLVVNKAEGMKYANV-AADFYELGLGDPRAISAAH 148
Query: 341 GTGTGELLD 349
G G ++++
Sbjct: 149 GDGVTDMIN 157
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 69/151 (45%), Gaps = 29/151 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVGRPNVGKS L N LVG R I D PG TRD +Y + L+DT G+
Sbjct: 181 KIAIVGRPNVGKSTLINALVGEERVIAFDMPGTTRDSIYVDFERNGKPYTLIDTAGLRRR 240
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K I E ++ T+ +I ++ V+I L+D +
Sbjct: 241 GKVFEAI-EKFSVVKTL--------------------------QSISDANVVILLLDARQ 273
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCES 315
++ D IA ++ + + +++ VNK +
Sbjct: 274 DISDQDAHIAGFVVEQ--GRALVVGVNKWDG 302
>gi|404485333|ref|ZP_11020531.1| GTPase Der [Barnesiella intestinihominis YIT 11860]
gi|404338768|gb|EJZ65213.1| GTPase Der [Barnesiella intestinihominis YIT 11860]
Length = 437
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 104/193 (53%), Gaps = 33/193 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNRL +AIV +E G TRDR YG+ W EF ++DTGG + S
Sbjct: 5 VAIVGRPNVGKSTLFNRLTQTRKAIVNEEAGTTRDRQYGKVEWCGQEFSVIDTGGWVVNS 64
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+ +I E+ I +Q AIEE+ VI+F+VD + G
Sbjct: 65 E---DIFEE--------------------------EINKQVALAIEEADVILFMVDVKTG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
D+ +A LR++ DK +IL NK +S + +EF+S G P +SA SG+GT
Sbjct: 96 AVDLDDHVAAILRRS--DKPVILVANKADS-NEWQYNAAEFYSFGLGDPFCVSAASGSGT 152
Query: 345 GELLDLVCSELKK 357
G+LLD + K
Sbjct: 153 GDLLDEILKRFTK 165
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 73/155 (47%), Gaps = 29/155 (18%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
E +PR A+VGRPN GKS++ N +G +R IV D G TRD +Y R F LVDT
Sbjct: 172 EENIPRFAVVGRPNAGKSSIINAFIGEDRYIVTDIAGTTRDSIYTRYDKFGFNFYLVDTA 231
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G+ + + + EDL + I ++ AIE S V I +
Sbjct: 232 GI----RKKGKVTEDLEYYSVI-----------------------RSIRAIEASDVCILM 264
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
+D G+ D I ++KN K +++ VNK +
Sbjct: 265 IDATRGIEGQDLNIFSLIQKN--KKGLVVCVNKWD 297
>gi|91225135|ref|ZP_01260357.1| GTP-binding protein EngA [Vibrio alginolyticus 12G01]
gi|269965174|ref|ZP_06179308.1| GTP-binding protein [Vibrio alginolyticus 40B]
gi|91190078|gb|EAS76349.1| GTP-binding protein EngA [Vibrio alginolyticus 12G01]
gi|269830160|gb|EEZ84387.1| GTP-binding protein [Vibrio alginolyticus 40B]
Length = 498
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/197 (40%), Positives = 108/197 (54%), Gaps = 41/197 (20%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWG-EHEFMLVDTGG 220
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YG++ G EHEF+++DTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQARLGEEHEFIVIDTGG 60
Query: 221 VLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLV 280
+ T E +M Q+ AAI+E+ V++FLV
Sbjct: 61 I--------------------------DGTEEGVETKMAE----QSLAAIDEADVVLFLV 90
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSPL-PI 336
DG+AGLT +DE IA LRK ++K +L VNK + GI ++FW LG + I
Sbjct: 91 DGRAGLTPSDEAIAAHLRK--IEKPAMLVVNKID----GIDADAACADFWQLGVDDMYQI 144
Query: 337 SAISGTGTGELLDLVCS 353
+A G G LL+ S
Sbjct: 145 AAAHGRGVTALLERALS 161
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 40/220 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS L NR++G R +V D PG TRD +Y E++L+DT GV
Sbjct: 211 KLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRRR 270
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + E ++ T+ A+E++ V++ ++D +
Sbjct: 271 GRINETV-EKFSVVKTL--------------------------KAVEDANVVLLVIDARE 303
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSEFWSLGFSPLP----IS 337
++ D + + + I++AVNK +S K ++ LGF IS
Sbjct: 304 NISDQDLSLLGFALN--AGRSIVIAVNKWDGLDSDVKESVKKELDRRLGFVDFARIHFIS 361
Query: 338 AISGTGTGELLDLVCSELKKVEVCIGFLLICNAITKIFHI 377
A+ GTG G L + + +G + +T+I +
Sbjct: 362 ALHGTGVGHLFESIQEAYNSATTRVG----TSVLTRIMKM 397
>gi|312796097|ref|YP_004029019.1| GTP-binding protein [Burkholderia rhizoxinica HKI 454]
gi|312167872|emb|CBW74875.1| GTP-binding protein [Burkholderia rhizoxinica HKI 454]
Length = 444
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 101/188 (53%), Gaps = 33/188 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+ P +A+VGRPNVGKS LFNRL A+V D PG+TRDR YG GE +++VDTGG
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPYLVVDTGGF 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
V+K I+ ++A RQ A+EE+ V++F+VD
Sbjct: 61 EPVAKD--GILHEMA---------------------------RQTRQAVEEADVVVFVVD 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ GL D+ IAD+LRK + I L VNK E + + ++F+ LG P ISA
Sbjct: 92 GRNGLAPQDKTIADYLRKT--GRPIFLVVNKAEGMKYSAV-AADFYELGLGDPRAISAAH 148
Query: 341 GTGTGELL 348
G G E++
Sbjct: 149 GDGVSEMI 156
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 83/192 (43%), Gaps = 38/192 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVGRPNVGKS L N L+G R I D PG TRD +Y + L+DT G+
Sbjct: 180 KIAIVGRPNVGKSTLVNALLGEERVIAFDLPGTTRDSIYIDFERQGRPYTLIDTAGLRKR 239
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K + E ++ T+ +I ++ V+I L+D +
Sbjct: 240 GKVFEAV-EKFSVVKTL--------------------------QSIADANVVILLLDARQ 272
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKC--------ESPRKGIMQVSEFWSLGFSPLPI 336
++ D IA ++ + + +++ VNK E + + + +F S I
Sbjct: 273 DISEQDAHIAGFVVEQ--GRALVIGVNKWDGLDEHVRERTKADLARKLKFLDFAKSHY-I 329
Query: 337 SAISGTGTGELL 348
SA TG G LL
Sbjct: 330 SAAEKTGIGALL 341
>gi|389843911|ref|YP_006345991.1| ribosome-associated GTPase EngA [Mesotoga prima MesG1.Ag.4.2]
gi|387858657|gb|AFK06748.1| ribosome-associated GTPase EngA [Mesotoga prima MesG1.Ag.4.2]
Length = 441
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 105/193 (54%), Gaps = 33/193 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
V I+GRPNVGKS LFNRLVGG RAIV D PGVTRD GR W + F LVDT G+
Sbjct: 4 VLIIGRPNVGKSTLFNRLVGGRRAIVDDLPGVTRDFTVGRVNWQQRTFQLVDTCGLF--- 60
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
++ NI+E+ T+ + + E +I+F+VDG+ G
Sbjct: 61 ENPENIVEEKMKEVTLEL--------------------------LSEGDLILFVVDGRFG 94
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV-SEFWSLGFS-PLPISAISGTG 343
LT+AD+ +AD+LRK ++ +I NK E+P + +E +SLGF P+ ISA G
Sbjct: 95 LTSADQVLADYLRKQRIE--VIFVANKVENPESFYSNMGNEIFSLGFGDPIKISAAHGLN 152
Query: 344 TGELLDLVCSELK 356
LLD + L+
Sbjct: 153 IDLLLDEIFERLE 165
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 96/212 (45%), Gaps = 53/212 (25%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVG+PN GKS++FN +VG R++V + G TRD
Sbjct: 182 KIAIVGKPNAGKSSIFNWIVGSPRSLVTEVSGTTRD------------------------ 217
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIE---------RQATAAIEESCV 275
+ T+ ++GIP+ + A R S ++ +A A+E S +
Sbjct: 218 -----------TVDETVEVDGIPITFIDTAGIRKKSKVKVMNVEYYSVMRAIDALERSDI 266
Query: 276 IIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKC----ESPRKGIMQV--SEFWSL 329
++ ++D G+ D+ IA KN K I NKC E RK +++ + + +
Sbjct: 267 MVMVIDSADGVGNQDQRIAGLAEKN--GKATIAVFNKCDLVDERRRKALLRTFKQDLYFI 324
Query: 330 GFSPLPI-SAISGTGTGELLDLVCSELKKVEV 360
+SP+ S ++G G EL+D + KK+++
Sbjct: 325 DYSPVIFTSTLTGEGMDELIDSIKLVSKKIDL 356
>gi|86142085|ref|ZP_01060609.1| GTP-binding protein EngA [Leeuwenhoekiella blandensis MED217]
gi|85831648|gb|EAQ50104.1| GTP-binding protein EngA [Leeuwenhoekiella blandensis MED217]
Length = 433
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 109/196 (55%), Gaps = 34/196 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS FNRL+ AIV GVTRDR YG++ W EF ++DTGG +
Sbjct: 4 VAIVGRPNVGKSTFFNRLIQRREAIVDSVSGVTRDRHYGKTDWNGKEFSVIDTGGYV--- 60
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+ +I E+ I++Q AI+E+ IIF+VD +AG
Sbjct: 61 RGSDDIFEE--------------------------QIDKQVELAIDEADAIIFMVDVEAG 94
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP-LPISAISGTGT 344
+T DE++A LR+ K + L VNK ++ + V EF++LG I++ISG+GT
Sbjct: 95 VTGMDEDVATLLRRQ--SKPVFLVVNKVDNAMRQDDAV-EFYNLGLGEYYTIASISGSGT 151
Query: 345 GELLDLVCSEL-KKVE 359
G+LLD V L +KVE
Sbjct: 152 GDLLDAVVEVLPEKVE 167
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 88/206 (42%), Gaps = 35/206 (16%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
E +LPR A+VGRPN GKS+ N L+G +R IV D G TRD + + EF LVDT
Sbjct: 170 ESVLPRFAVVGRPNAGKSSFINALIGEDRYIVTDIAGTTRDAIDTKYNRFGFEFNLVDTA 229
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G+ SK + EDL + + ++ AIE V + +
Sbjct: 230 GIRRKSK----VKEDLEFYSVM-----------------------RSVRAIEHCDVCLLV 262
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSL------GFSP 333
VD G + I WL + K I++ +NK + K + EF F+
Sbjct: 263 VDATRGFDGQVQNIF-WLAERNR-KGIVILINKWDLVEKENKTIREFEKHIRAQIEPFTD 320
Query: 334 LPISAISGTGTGELLDLVCSELKKVE 359
+PI IS + + + +K E
Sbjct: 321 VPIVFISALTKQRVYKAIETAVKVYE 346
>gi|407790351|ref|ZP_11137446.1| GTP-binding protein Der [Gallaecimonas xiamenensis 3-C-1]
gi|407204973|gb|EKE74952.1| GTP-binding protein Der [Gallaecimonas xiamenensis 3-C-1]
Length = 495
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/206 (39%), Positives = 114/206 (55%), Gaps = 44/206 (21%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VA+VGRPNVGKS LFNRL A+V D PG+TRDR YG++ +GE++F+LVDTGG+
Sbjct: 1 MLPVVALVGRPNVGKSTLFNRLTNSRDALVADYPGLTRDRKYGQARYGEYDFILVDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
K GI +AA+A +Q+ A+EE+ V++ LVD
Sbjct: 61 EGDEK------------------GI-----DAAMA-------KQSLLAMEEADVVMLLVD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSPL-PIS 337
+ GLTAAD+ IA +R+ + K + L NK + GI +EFW L + I+
Sbjct: 91 ARDGLTAADDAIARHIRQ--LGKPVFLVANKVD----GIDADSACAEFWGLSLGEVWQIA 144
Query: 338 AISGTGTGELLDL----VCSELKKVE 359
A G G +LLD V +EL + E
Sbjct: 145 AAHGRGVTQLLDNALIPVVAELAQAE 170
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 92/195 (47%), Gaps = 38/195 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVGRPNVGKS L NR++G R +V D PG TRD +Y G+ ++L+DT GV
Sbjct: 208 KIAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSVYIPMERGDKHYILIDTAGVRRR 267
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + +E ++ T+ AIE++ V++ +D +
Sbjct: 268 GRID-DAVEKFSVVKTL--------------------------QAIEDANVVLLTMDARE 300
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK----CESPRKGIMQVSEFWSLGFSPLP----I 336
GL+ D + + + ++L VNK + R+ I + + LGF I
Sbjct: 301 GLSDQDLNLLGHVLN--AGRALVLVVNKWDGLSQDDREEIKRELD-RRLGFIDFARLHFI 357
Query: 337 SAISGTGTGELLDLV 351
SA+ G+G G L + V
Sbjct: 358 SALHGSGVGNLFESV 372
>gi|163802477|ref|ZP_02196370.1| GTP-binding protein EngA [Vibrio sp. AND4]
gi|159173778|gb|EDP58593.1| GTP-binding protein EngA [Vibrio sp. AND4]
Length = 498
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 115/213 (53%), Gaps = 50/213 (23%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWG-EHEFMLVDTGG 220
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YG++ G EHEF+++DTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQASLGEEHEFIVIDTGG 60
Query: 221 VLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLV 280
+ T E +M Q+ AAI+E+ V++FLV
Sbjct: 61 I--------------------------DGTEEGVETKMAE----QSLAAIDEADVVLFLV 90
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSPL-PI 336
DG+AGLT +DE IA LRK ++K +L VNK + GI ++FW LG + I
Sbjct: 91 DGRAGLTPSDEAIAAHLRK--IEKPAMLVVNKID----GIDADAACADFWQLGVDDMYHI 144
Query: 337 SAISGTGTGELL---------DLVCSELKKVEV 360
+A G G LL DL+ SE ++ E+
Sbjct: 145 AAAHGRGVTALLERALAPFFDDLLASESEEGEI 177
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 99/220 (45%), Gaps = 40/220 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS L NR++G R +V D PG TRD +Y E++L+DT GV
Sbjct: 211 KLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRRR 270
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + E ++ T+ A+E++ V++ ++D +
Sbjct: 271 GRINETV-EKFSVVKTL--------------------------KAVEDANVVLLVIDARE 303
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSEFWSLGFSPLP----IS 337
++ D + + + I+LAVNK ++ K ++ LGF IS
Sbjct: 304 NISDQDLSLLGFALN--AGRSIVLAVNKWDGLDNEVKENVKKELDRRLGFVDFARIHFIS 361
Query: 338 AISGTGTGELLDLVCSELKKVEVCIGFLLICNAITKIFHI 377
A+ GTG G L + + K +G + +T+I +
Sbjct: 362 ALHGTGVGHLFESIQEAYKSATTRVG----TSVLTRIMKM 397
>gi|399116777|emb|CCG19586.1| GTPp-binding protein EngA [Taylorella asinigenitalis 14/45]
Length = 459
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/197 (40%), Positives = 104/197 (52%), Gaps = 33/197 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFNRL AIV D G+TRDR YG G+ F+++DTGG
Sbjct: 5 PVVALVGRPNVGKSTLFNRLTRSRNAIVADYSGLTRDRHYGEGRVGDRPFLVIDTGGF-- 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K + IM+++A RQ AI ES V+IFLVD +
Sbjct: 63 EPKVKTGIMKEMA---------------------------RQTELAISESDVVIFLVDTR 95
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
+G+ A D EIA LRK + +ILAVNK E + +EF LG PL IS+ G
Sbjct: 96 SGINAHDHEIAVKLRKVGVP--VILAVNKAEGLQAS-QASAEFHELGLGEPLAISSAHGD 152
Query: 343 GTGELLDLVCSELKKVE 359
G L++ S++ +VE
Sbjct: 153 GVANLIEAALSKIPQVE 169
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 90/194 (46%), Gaps = 36/194 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++A+VGRPNVGKS L N L+G R I D PG TRD + ++ L+DT G+
Sbjct: 195 KLAVVGRPNVGKSTLINSLLGEQRVIAFDMPGTTRDAIEIDFESNGKKYKLIDTAGLRKR 254
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K +I E ++ T+ AIE V++ ++D Q+
Sbjct: 255 GKVFESI-EKFSVIKTL--------------------------QAIEACNVVVLILDAQS 287
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK----CESPRKGIMQVSE--FWSLGFSPLP-IS 337
++ D IA ++ ++ + +++A+NK E R+ +++ E L F+ + IS
Sbjct: 288 EISEQDAHIAGFILES--GRALVVAINKWDGLSEDKREWVIREFERKLRFLSFAKVHYIS 345
Query: 338 AISGTGTGELLDLV 351
A+ G LL V
Sbjct: 346 ALKAYGIKSLLKSV 359
>gi|127512226|ref|YP_001093423.1| GTP-binding protein EngA [Shewanella loihica PV-4]
gi|166225856|sp|A3QCG6.1|DER_SHELP RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|126637521|gb|ABO23164.1| small GTP-binding protein [Shewanella loihica PV-4]
Length = 489
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 103/196 (52%), Gaps = 40/196 (20%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YGR+ +EF++VDTGG+
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADYPGLTRDRKYGRAHLSGYEFIVVDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
T E RM Q+ AAIEE+ V++FL D
Sbjct: 61 --------------------------DGTEEGIETRMAE----QSLAAIEEADVVLFLTD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSPL-PIS 337
+AGLTAADE IA+ LR+ F++ NK + GI EFW+LG + ++
Sbjct: 91 ARAGLTAADEAIAEHLRRREKTTFVV--ANKVD----GIDADSACGEFWALGLGEVYQMA 144
Query: 338 AISGTGTGELLDLVCS 353
A G G +++ +
Sbjct: 145 AAQGRGVTNMIEYALT 160
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 96/197 (48%), Gaps = 37/197 (18%)
Query: 163 LP-RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
LP ++AI+G+PNVGKS L NR++G R +V DEPG TRD +Y E++++DT GV
Sbjct: 198 LPIKLAIIGKPNVGKSTLTNRILGEERVVVYDEPGTTRDSIYIPLERDGQEYVIIDTAGV 257
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
SK + E ++ T+ A+E++ V++ +VD
Sbjct: 258 RRRSKVHETV-EKFSVIKTL--------------------------KAVEDANVVLLVVD 290
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQ--VSEF-WSLGFSPLP--- 335
+ G+ D + + + + +++AVNK + + + + SE LGF
Sbjct: 291 AREGIAEQDLGLLGFALN--VGRALVIAVNKWDGIDQDVKERVKSELDRRLGFIDFARIH 348
Query: 336 -ISAISGTGTGELLDLV 351
ISA+ GTG G L + V
Sbjct: 349 FISALHGTGVGHLFESV 365
>gi|283769536|ref|ZP_06342432.1| ribosome-associated GTPase EngA [Bulleidia extructa W1219]
gi|283103804|gb|EFC05190.1| ribosome-associated GTPase EngA [Bulleidia extructa W1219]
Length = 437
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 102/191 (53%), Gaps = 35/191 (18%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS +FNRLVG +IV D PGVTRDR+YG + W + F ++DTGG
Sbjct: 6 VAIVGRPNVGKSTIFNRLVGERMSIVEDIPGVTRDRLYGSAEWAGNSFRVIDTGG----- 60
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
I + P T I Q A+EE+ VI+ + DGQ G
Sbjct: 61 ---------------IQLANQPFQTE----------IRAQVDIAMEEADVILMVCDGQMG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+ D IA L+KN K ++LAVN+ + + ++ + EF+ LG P+ S I G G
Sbjct: 96 VMEDDRFIAGLLQKN--KKPVVLAVNRIDDQSR-MVNIYEFYELGLGDPMACSGIHGVGV 152
Query: 345 GELLDLVCSEL 355
G++LD C EL
Sbjct: 153 GDVLDR-CFEL 162
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 84/170 (49%), Gaps = 29/170 (17%)
Query: 157 NVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLV 216
++PE ++A++G PNVGKS+L N ++ RAIV + G TRD + +++V
Sbjct: 168 DIPETKGVKMAVIGEPNVGKSSLVNAILNEERAIVSNIQGTTRDAIDTPFTHEGKPYIIV 227
Query: 217 DTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVI 276
DT G+ + + I E + + + +A AIE V+
Sbjct: 228 DTAGI----RKRGKIYESIEKYSVL-----------------------RAMRAIERCDVV 260
Query: 277 IFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
+F++DG+AG+ D+ +A + + M+K II+ VNK + K ++EF
Sbjct: 261 LFVMDGEAGIREQDKHVAGYAVE--MNKPIIIVVNKWDIVEKDDRTMNEF 308
>gi|256823051|ref|YP_003147014.1| small GTP-binding protein [Kangiella koreensis DSM 16069]
gi|256796590|gb|ACV27246.1| small GTP-binding protein [Kangiella koreensis DSM 16069]
Length = 467
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 111/195 (56%), Gaps = 34/195 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP +A+VGRPNVGKS LFNRL A+V + PG+TRDR YG++ +F++VDTGG+
Sbjct: 1 MLPVIALVGRPNVGKSTLFNRLTKSRDALVANLPGLTRDRQYGQATLKGQKFIVVDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ G++G ++ Q+ AI E+ +++FLVD
Sbjct: 61 AGDEE---------------GIDG---------------LMAGQSLLAITEANIVLFLVD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAIS 340
+ G+TAADE +AD LR+ +K II+ VNK + +S+++SLG+ + LP++A
Sbjct: 91 ARTGMTAADEFVADHLRRQ--NKPIIVLVNKVDGIHAD-AALSDYYSLGYQTVLPLAAAH 147
Query: 341 GTGTGELLDLVCSEL 355
G G L+D + EL
Sbjct: 148 GRGVNTLVDTIFDEL 162
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 89/195 (45%), Gaps = 38/195 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVGRPNVGKS L NR +G R +V D PG TRD +Y + ++ L+DT GV
Sbjct: 182 KLAIVGRPNVGKSTLVNRFLGEERVVVYDLPGTTRDSIYIEMERRDKKYTLIDTAGVRRR 241
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K + + E ++ T+ AI++S V I ++D +
Sbjct: 242 GKVKETV-EKFSVLKTL--------------------------QAIDDSNVSIMVMDARE 274
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK----CESPRKGIMQVSEFWSLGFSPLP----I 336
+T D + ++ + + +++A+NK E R + + LGF I
Sbjct: 275 PITDQDLSLISYIIDS--GRSMVIAINKWDGMTEEQRDTVKHEID-RRLGFIDFARIHFI 331
Query: 337 SAISGTGTGELLDLV 351
SA+ G+ G L + V
Sbjct: 332 SALHGSNVGHLWESV 346
>gi|269978226|ref|ZP_06185176.1| ribosome-associated GTPase EngA [Mobiluncus mulieris 28-1]
gi|269933735|gb|EEZ90319.1| ribosome-associated GTPase EngA [Mobiluncus mulieris 28-1]
Length = 547
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/196 (41%), Positives = 105/196 (53%), Gaps = 34/196 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS L NR++G A+V+DEPGVTRDR+ + W +F L+DTGG
Sbjct: 112 PTVAIVGRPNVGKSTLVNRILGRRVAVVLDEPGVTRDRVIYDADWNGRDFHLIDTGG--- 168
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+G++G+ + AVA QA AIE + V +F+VD
Sbjct: 169 ---------------WDVGVKGL-----DKAVA-------TQAEIAIEMADVSLFVVDAN 201
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G TA DE + LR + K +IL NK +S R S W+LG P PISA+ G
Sbjct: 202 VGATATDEAMMRLLRAS--KKPVILVANKVDSERAE-ADASGLWNLGLGEPYPISALHGR 258
Query: 343 GTGELLDLVCSELKKV 358
G GELLD++ L V
Sbjct: 259 GVGELLDVLLDALPTV 274
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 76/156 (48%), Gaps = 29/156 (18%)
Query: 159 PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDT 218
P PRVA+VGRPNVGKS+L N L G R++V D PG TRD + E++ VDT
Sbjct: 282 PADSTPRVALVGRPNVGKSSLLNSLAGSGRSVVSDTPGTTRDPVDEVLELDGKEWVFVDT 341
Query: 219 GGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIF 278
G+ I T+G A S++ +A +AIE + V +
Sbjct: 342 AGIKR------------RIKQTVG-------------ADYYSVL--RAQSAIESAEVALV 374
Query: 279 LVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
L+DG L+ D ++ + + ++ + ++L NK +
Sbjct: 375 LLDGGEPLSEQDVKVVNLVVES--GRALVLVNNKWD 408
>gi|397667163|ref|YP_006508700.1| GTPase involved in ribosome synthesis and maintenance [Legionella
pneumophila subsp. pneumophila]
gi|395130574|emb|CCD08819.1| GTPase involved in ribosome synthesis and maintenance [Legionella
pneumophila subsp. pneumophila]
Length = 462
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 107/189 (56%), Gaps = 34/189 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P +A+VGRPNVGKS LFNR+ A+V D PG+TRDR YG + + F++VDTGG
Sbjct: 1 MIPVIALVGRPNVGKSTLFNRITKTQDALVADFPGLTRDRQYGHAQYENKSFIIVDTGG- 59
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
IG++ I + T ++ RQ+ A+ E+ VI+FLVD
Sbjct: 60 -------------------IGVDDIEVDT----------LMSRQSQVALNEANVILFLVD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAIS 340
G++GLT D++IA LRK ++K + L VNK + + I ++F SLG + + ISA
Sbjct: 91 GRSGLTGIDQQIAQALRK--LNKKVHLVVNKTDGMNEDIA-CADFQSLGITDIHAISASH 147
Query: 341 GTGTGELLD 349
G G LL+
Sbjct: 148 GGGISSLLE 156
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 88/191 (46%), Gaps = 36/191 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++A GRPNVGKS L NR++G R +V D PG TRD + + +++L+DT GV
Sbjct: 176 KIAFAGRPNVGKSTLINRILGEERVVVYDMPGTTRDSISIPFTREDKQYVLIDTAGVRRK 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
S+ I E ++ T+ AI+E+ V + L+D
Sbjct: 236 SRIDEKI-EKFSVIKTL--------------------------QAIKEAHVCLLLLDANE 268
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSEFWSLGFSPLP----IS 337
G+T D + ++ ++ K +++AVNK E K ++ L F+ IS
Sbjct: 269 GITDQDMNLLGFIIES--GKALVIAVNKWDGLEEDHKEKIKSELSRRLHFANFAKIRFIS 326
Query: 338 AISGTGTGELL 348
A+ G+G G L
Sbjct: 327 ALHGSGVGGLF 337
>gi|441504678|ref|ZP_20986671.1| GTP-binding protein EngA [Photobacterium sp. AK15]
gi|441427777|gb|ELR65246.1| GTP-binding protein EngA [Photobacterium sp. AK15]
Length = 500
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 107/192 (55%), Gaps = 40/192 (20%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YG++ EHEF+++DTGG+
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGKAELEEHEFIVIDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ ED G+E + + Q+ AAIEE+ V++FLVD
Sbjct: 61 --------DGTED-------GVE---------------TKMAEQSLAAIEEADVVLFLVD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSPL-PIS 337
G+AGLTAAD+ IA LR +K L VNK + GI ++FW LG + I+
Sbjct: 91 GRAGLTAADQAIAKHLRSR--NKPTFLVVNKID----GIDADSACADFWQLGVDAMYQIA 144
Query: 338 AISGTGTGELLD 349
A G L++
Sbjct: 145 AAQNRGVTALME 156
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 92/194 (47%), Gaps = 36/194 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS L NR++G R +V D PG TRD +Y E++L+DT G+
Sbjct: 210 KLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMEREGQEYVLIDTAGI--- 266
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + N+ E + + + Q AIE++ V++ ++D +
Sbjct: 267 -RRRKNMHEAVEKFSVV-----------------------QTLKAIEDANVVLLVIDARE 302
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQ--VSEF-WSLGFSPLP----IS 337
++ D + + + +++AVNK + + + SE LGF IS
Sbjct: 303 NISDQDLSLLGYALN--AGRSLVIAVNKWDGLDNEVKERVKSELDRRLGFVDFARIHFIS 360
Query: 338 AISGTGTGELLDLV 351
A+ GTG G L + V
Sbjct: 361 ALHGTGVGHLYESV 374
>gi|456063405|ref|YP_007502375.1| small GTP-binding protein [beta proteobacterium CB]
gi|455440702|gb|AGG33640.1| small GTP-binding protein [beta proteobacterium CB]
Length = 454
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 101/187 (54%), Gaps = 33/187 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P + IVGRPNVGKS LFNRL A+V D G+TRDR YG+ GE F+ VDTGG
Sbjct: 3 PVITIVGRPNVGKSTLFNRLTRSRDALVADFSGLTRDRHYGKGRIGERAFICVDTGGFEP 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
V+K+ I+ ++A +Q A+ ES ++IFLVDG+
Sbjct: 63 VAKT--GIVAEMA---------------------------KQTKQAVAESDIVIFLVDGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+ D IAD+LRK + +ILAVNK E + G++ ++F LG P PIS+ G
Sbjct: 94 LGMAPQDRVIADFLRKT--GRPVILAVNKTEGMQAGVV-TADFHELGLGEPFPISSAHGD 150
Query: 343 GTGELLD 349
G L+D
Sbjct: 151 GVRGLID 157
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 87/193 (45%), Gaps = 40/193 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++A+VGRPNVGKS L N+L+G R I D PG TRD + ++LVDT G+
Sbjct: 182 KIAVVGRPNVGKSTLINKLIGEERVIAFDMPGTTRDAIEVPFERNGKPYILVDTAGLRRR 241
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K I E ++ T+ AI + V+I ++D Q
Sbjct: 242 GKVFEAI-EKFSVVKTL--------------------------QAIADCNVVILMLDAQQ 274
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKC--------ESPRKGIMQVSEFWSLGFSPL-P 335
++ D IA ++ + + +++AVNK E R I Q F L F+ + P
Sbjct: 275 DISEQDAHIAGFIVE--AGRALVVAVNKWDGLDAYVKERARLEIAQKLRF--LDFANVHP 330
Query: 336 ISAISGTGTGELL 348
ISA GTG EL
Sbjct: 331 ISAKKGTGLKELF 343
>gi|332284650|ref|YP_004416561.1| GTP-binding protein [Pusillimonas sp. T7-7]
gi|330428603|gb|AEC19937.1| GTP-binding protein [Pusillimonas sp. T7-7]
Length = 478
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 100/193 (51%), Gaps = 33/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGR NVGKS LFNR+ A+V D G+TRDR YG GEH F+ VDTGG
Sbjct: 8 PVVALVGRANVGKSTLFNRITRSRAALVADFSGLTRDRHYGEGRVGEHPFIAVDTGGFEP 67
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
V+K +GI L + RQ AI ES V+IFLVD +
Sbjct: 68 VAK-----------------DGILLE------------MARQTQQAIAESDVVIFLVDAR 98
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
AG+ A D EIA LRK+ + + LAVNK E R G +EF LG P ISA G
Sbjct: 99 AGVNAHDHEIARLLRKS--GQRVFLAVNKAEGMRYG-SATAEFHELGLGEPHAISASHGD 155
Query: 343 GTGELLDLVCSEL 355
G EL++ S +
Sbjct: 156 GVVELIERALSYM 168
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 88/194 (45%), Gaps = 36/194 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVGRPNVGKS L N L+G +R I D PG TRD + + L+DT G+
Sbjct: 214 KLAIVGRPNVGKSTLINTLLGEDRVIAFDMPGTTRDAIEIEFERNGVSYTLIDTAGLRRR 273
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K I E ++ T+ AIE V++ ++D Q
Sbjct: 274 GKVFEAI-EKFSVIKTL--------------------------QAIEACNVVVLMLDAQT 306
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVS---EFWSLGFSPL-PIS 337
++ D IA ++ + + +++A+NK +S ++ +Q + L F+ + +S
Sbjct: 307 EISDQDAHIAGFVLET--GRALVVAINKWDGLDSEQRERIQRDFDRKLHFLSFAKMHTVS 364
Query: 338 AISGTGTGELLDLV 351
A+ G G L+ V
Sbjct: 365 ALKGQGVNVLIKSV 378
>gi|295398578|ref|ZP_06808610.1| ribosome-associated GTPase EngA [Aerococcus viridans ATCC 11563]
gi|294973179|gb|EFG48974.1| ribosome-associated GTPase EngA [Aerococcus viridans ATCC 11563]
Length = 436
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 102/187 (54%), Gaps = 34/187 (18%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+AIVGRPNVGKS +FNR+VG +IV DEPGVTRDR+Y + W + ++DTGG+
Sbjct: 6 IAIVGRPNVGKSTIFNRVVGDRISIVQDEPGVTRDRIYAQGEWLGKQLNVIDTGGI---- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
E + I QA A+EE+ VII + + + G
Sbjct: 62 --------------------------EFNDQDFMTQIRLQAEIAMEEADVIIMMTNVREG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+T D +IA LRK DK ++LAVNK ++P + ++ +F+SLG P PIS G G
Sbjct: 96 VTKTDSQIASMLRKT--DKPVVLAVNKVDNPEQR-AEIYDFYSLGLGDPYPISGSHGLGI 152
Query: 345 GELLDLV 351
G++L+ V
Sbjct: 153 GDILEEV 159
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 80/161 (49%), Gaps = 31/161 (19%)
Query: 167 AIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHE-FMLVDTGGVLNVS 225
A++GRPNVGKS+L N ++G NR IV + G TRD + SF + + + ++DT G+
Sbjct: 179 ALIGRPNVGKSSLVNAILGENRVIVSNVAGTTRDAI-DTSFEDDGQVYKIIDTAGI---- 233
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+ + + E AT + +V R A AIE + V + +++ + G
Sbjct: 234 RKRGKVYE---------------ATEKYSVMR--------AMRAIERAQVCLVVLNAEEG 270
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
+ D+ IA + + + II+ VNK ++ K + +F
Sbjct: 271 IRDQDKTIAGYAHE--AGRGIIIVVNKWDTLEKDNHTMKKF 309
>gi|332140453|ref|YP_004426191.1| GTP-binding protein Der [Alteromonas macleodii str. 'Deep ecotype']
gi|332141960|ref|YP_004427698.1| GTP-binding protein Der [Alteromonas macleodii str. 'Deep ecotype']
gi|410862365|ref|YP_006977599.1| GTP-binding protein Der [Alteromonas macleodii AltDE1]
gi|238693251|sp|B4RV85.1|DER_ALTMD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|327550475|gb|AEA97193.1| GTP-binding protein Der [Alteromonas macleodii str. 'Deep ecotype']
gi|327551982|gb|AEA98700.1| GTP-binding protein Der [Alteromonas macleodii str. 'Deep ecotype']
gi|410819627|gb|AFV86244.1| GTP-binding protein Der [Alteromonas macleodii AltDE1]
Length = 481
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 109/188 (57%), Gaps = 34/188 (18%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VA+VGRPNVGKS LFNRL A+V D PG+TRDR YG++ + + +F++VDTGG+
Sbjct: 1 MLPVVALVGRPNVGKSTLFNRLTNTRDALVADYPGLTRDRKYGQAKFEKRQFIVVDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
T EGI +A +A +Q+ AIEE+ V++FLVD
Sbjct: 61 ------------------TGDEEGI-----DAEMA-------QQSLLAIEEADVVLFLVD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLP-ISAIS 340
+AGL AD+ IAD LR+ ++K I + NK + G + +EF+SLG + I+A
Sbjct: 91 ARAGLLPADQGIADHLRR--INKQIFVVANKVDGI-DGDSESAEFYSLGLGAIKQIAAAH 147
Query: 341 GTGTGELL 348
G G +LL
Sbjct: 148 GRGVSQLL 155
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 93/194 (47%), Gaps = 36/194 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVG+PNVGKS L NR++G R +V D PG TRD +Y E E++L+DT GV
Sbjct: 195 KLAIVGKPNVGKSTLTNRILGEERVVVYDMPGTTRDSVYIPMERDEREYILIDTAGVRKR 254
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K + E +I T+ AIEE+ V++ ++D +
Sbjct: 255 KKISEAV-EKFSIVKTL--------------------------QAIEEANVVLLVIDARE 287
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSPLP----IS 337
G+T D + ++ + + +++AVNK + I ++ LGF IS
Sbjct: 288 GITDQDLSLLGFVLNS--GRSLVVAVNKWDGLSTDIKDDIKREMDRRLGFIDFARIHFIS 345
Query: 338 AISGTGTGELLDLV 351
A+ G+G G L + V
Sbjct: 346 ALHGSGVGNLFESV 359
>gi|389864811|ref|YP_006367051.1| GTP-binding protein engA [Modestobacter marinus]
gi|388487014|emb|CCH88568.1| GTP-binding protein engA [Modestobacter marinus]
Length = 455
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/198 (37%), Positives = 99/198 (50%), Gaps = 34/198 (17%)
Query: 159 PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDT 218
P LP VA+VGRPNVGKS L NR +G A+V D PGVTRDR+ ++ W F +VDT
Sbjct: 13 PTGPLPVVAVVGRPNVGKSTLVNRFIGRRAAVVQDVPGVTRDRIPYQALWNGKNFTVVDT 72
Query: 219 GGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIF 278
GG E M + I RQA A++ + VI+
Sbjct: 73 GGW------------------------------EPKATGMAAAIARQAEYAMKTADVIVL 102
Query: 279 LVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPIS 337
+VD G T D A LR++ D+ +IL NK + R +E WSLG P P+S
Sbjct: 103 VVDASVGATETDLAAARVLRRS--DRPVILVANKVDDERSE-AGAAELWSLGLGEPFPVS 159
Query: 338 AISGTGTGELLDLVCSEL 355
A+ G G+G+LLDLV +
Sbjct: 160 ALHGRGSGDLLDLVLDAM 177
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 34/57 (59%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
RVA+VGRPNVGKS+L NRL R++V G T D + G E+ VDT G+
Sbjct: 192 RVALVGRPNVGKSSLINRLSKEERSVVDSVAGTTVDPVDSIVTIGGEEWRFVDTAGL 248
>gi|193216656|ref|YP_001999898.1| GTP-binding protein EngA [Mycoplasma arthritidis 158L3-1]
gi|193001979|gb|ACF07194.1| GTPase protein EngA [Mycoplasma arthritidis 158L3-1]
Length = 434
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/191 (38%), Positives = 103/191 (53%), Gaps = 35/191 (18%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAI+G+PNVGKS FN+L+ +AIV D PGVTRDR+Y W F L+DTGG+
Sbjct: 5 VAIIGKPNVGKSTFFNKLINKRKAIVYDRPGVTRDRIYDVVSWAGSTFTLIDTGGI---- 60
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
TI + I+ QA AI+E+ VI+FL+DG+
Sbjct: 61 --------------TIENDD------------FKEQIKIQAQVAIDEASVIVFLIDGRNS 94
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGTGT 344
LT+ D +A+ LRK+ K +ILA+NK E+ + +SLGF+ + IS+I G G
Sbjct: 95 LTSEDFFVAELLRKSA--KKVILAINKIENNNFDFDPL--IYSLGFNKIFKISSIHGDGL 150
Query: 345 GELLDLVCSEL 355
G+LLD + S
Sbjct: 151 GDLLDEIISSF 161
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 35/62 (56%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++A++G+ NVGKS L N L R+IV D G TRD + EF +VDT G+
Sbjct: 173 KLALLGKTNVGKSTLLNTLSNEERSIVSDIAGTTRDAISSFIKINGEEFEVVDTAGIKRK 232
Query: 225 SK 226
SK
Sbjct: 233 SK 234
>gi|443243870|ref|YP_007377095.1| GTPase [Nonlabens dokdonensis DSW-6]
gi|442801269|gb|AGC77074.1| GTPase [Nonlabens dokdonensis DSW-6]
Length = 433
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/191 (38%), Positives = 105/191 (54%), Gaps = 33/191 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS LFNR++ AI GVTRDR YGRS W EF L+DTGG +
Sbjct: 4 VAIVGRPNVGKSTLFNRMIQRREAITDSVSGVTRDRHYGRSDWNGKEFSLIDTGGYV--- 60
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
IG + + + I++Q AI+E+ I+F+V+ + G
Sbjct: 61 ---------------IGSDDV-----------FETEIDQQVELAIDEADAILFMVNAEEG 94
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP-LPISAISGTGT 344
+T DE++A LRK + K + L VNK ++ ++ EF++LG IS+++G+GT
Sbjct: 95 ITPMDEDVAQLLRK--VTKPVFLVVNKVDNNKRE-QDAYEFYNLGLGEYFSISSMNGSGT 151
Query: 345 GELLDLVCSEL 355
G+LLD V L
Sbjct: 152 GDLLDEVVKVL 162
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 80/184 (43%), Gaps = 35/184 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LPR A+VGRPN GKS+ N L+G +R IV D G TRD + + EF LVDT G+
Sbjct: 173 LPRFAVVGRPNAGKSSFINALIGEDRYIVTDIAGTTRDSIDTKYNRFGFEFNLVDTAGI- 231
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + + EDL + + ++ AIE V I ++D
Sbjct: 232 ---RRKKKVREDLEFYSVM-----------------------RSVRAIEHCDVCILMLDA 265
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSL------GFSPLPI 336
G + I WL + K I++ VNK + K EF + F+ +PI
Sbjct: 266 TRGFDGQVQNIF-WLAERNR-KGIVVLVNKWDLVDKETNTAKEFEAKIRREMEPFTDVPI 323
Query: 337 SAIS 340
IS
Sbjct: 324 VFIS 327
>gi|156973384|ref|YP_001444291.1| GTP-binding protein EngA [Vibrio harveyi ATCC BAA-1116]
gi|166225933|sp|A7MZE5.1|DER_VIBHB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|156524978|gb|ABU70064.1| hypothetical protein VIBHAR_01071 [Vibrio harveyi ATCC BAA-1116]
Length = 498
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 114/213 (53%), Gaps = 50/213 (23%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWG-EHEFMLVDTGG 220
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YG++ G EHEF+++DTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQARLGEEHEFIVIDTGG 60
Query: 221 VLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLV 280
+ T E +M Q+ AAI+E+ V++FLV
Sbjct: 61 I--------------------------DGTEEGVETKMAE----QSLAAIDEADVVLFLV 90
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSPL-PI 336
DG+AGLT +DE IA LRK ++K +L VNK + GI ++FW LG + I
Sbjct: 91 DGRAGLTPSDEAIAAHLRK--IEKPAMLVVNKID----GIDADAACADFWQLGVDDMYQI 144
Query: 337 SAISGTGTGELL---------DLVCSELKKVEV 360
+A G G LL DL+ SE + E+
Sbjct: 145 AAAHGRGVTALLERALAPFFDDLLASESEDGEI 177
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 99/220 (45%), Gaps = 40/220 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS L NR++G R +V D PG TRD +Y E++L+DT GV
Sbjct: 211 KLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRRR 270
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + E ++ T+ A+E++ V++ ++D +
Sbjct: 271 GRINETV-EKFSVVKTL--------------------------KAVEDANVVLLVIDARE 303
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSEFWSLGFSPLP----IS 337
++ D + + + I+LAVNK ++ K ++ LGF IS
Sbjct: 304 NISDQDLSLLGFALN--AGRSIVLAVNKWDGLDNEVKENVKKELDRRLGFVDFARIHFIS 361
Query: 338 AISGTGTGELLDLVCSELKKVEVCIGFLLICNAITKIFHI 377
A+ GTG G L + + K +G + +T+I +
Sbjct: 362 ALHGTGVGHLFESIQEAYKSATTRVG----TSVLTRIMKM 397
>gi|78186288|ref|YP_374331.1| GTP-binding protein EngA [Chlorobium luteolum DSM 273]
gi|123583448|sp|Q3B5U3.1|DER_PELLD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|78166190|gb|ABB23288.1| Small GTP-binding protein domain [Chlorobium luteolum DSM 273]
Length = 436
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 104/187 (55%), Gaps = 32/187 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +A+VGRPNVGKS LFNR++ AIV PGVTRDR W EF L+DTGG
Sbjct: 3 PLIALVGRPNVGKSTLFNRILREKAAIVDPTPGVTRDRHIAEGHWQGREFRLMDTGGYAP 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
ED I+T +M+E Q AI+++ +IIFL D +
Sbjct: 63 ---------EDGVIST--------------------AMLE-QTMMAIQDADIIIFLADVR 92
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
+G++ D E+A L++++ DK I LAVNK ESP+ I + + F S GF+ P ISA G+
Sbjct: 93 SGVSYDDLELAKILKRDFSDKPIFLAVNKAESPQLAI-EAASFVSTGFTEPWAISARDGS 151
Query: 343 GTGELLD 349
G +LLD
Sbjct: 152 GVADLLD 158
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 41/62 (66%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R+A++GRPNVGKS+ N L+G NR IV PG TRD + R + EFML+DT G+
Sbjct: 178 RLAVIGRPNVGKSSFVNALLGSNRQIVSSIPGTTRDAIDTRFTRKQQEFMLIDTAGLRKR 237
Query: 225 SK 226
+K
Sbjct: 238 TK 239
>gi|241662759|ref|YP_002981119.1| GTP-binding protein EngA [Ralstonia pickettii 12D]
gi|404378009|ref|ZP_10983109.1| GTPase Der [Ralstonia sp. 5_2_56FAA]
gi|240864786|gb|ACS62447.1| small GTP-binding protein [Ralstonia pickettii 12D]
gi|348615940|gb|EGY65448.1| GTPase Der [Ralstonia sp. 5_2_56FAA]
Length = 447
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/198 (41%), Positives = 105/198 (53%), Gaps = 37/198 (18%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+ P +A+VGRPNVGKS LFNRL A+V D PG+TRDR YG G+ F+ +DTGG
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADIPGLTRDRHYGEGRVGDRPFIAIDTGGF 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
V+K EGI VA M +Q A+ E+ V+IF+VD
Sbjct: 61 EPVAK-----------------EGI--------VAEMA----KQTRQAVVEADVVIFIVD 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ GL D IAD+LRK + I+LAVNK E R + S+F+ LG P ISA
Sbjct: 92 GRLGLAPQDRVIADYLRKT--GRRILLAVNKAEGMRYTAV-ASDFYELGLGDPAAISAAH 148
Query: 341 GTGTGEL----LDLVCSE 354
G G +L LDL +E
Sbjct: 149 GDGVNDLVAEALDLAFAE 166
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 70/151 (46%), Gaps = 29/151 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R+AIVGRPNVGKS L N L+G R I D PG TRD +Y + L+DT G+
Sbjct: 182 RIAIVGRPNVGKSTLVNALIGEERVIAFDMPGTTRDAIYVDFERNGKPYTLIDTAGLRKR 241
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K I E ++ T+ +I ++ V++ ++D Q
Sbjct: 242 GKVFEAI-EKFSVVKTL--------------------------QSIADANVVVLILDAQQ 274
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCES 315
++ D IA ++ ++ + +++ VNK +
Sbjct: 275 DISDQDAHIAGFIVES--GRALVIGVNKWDG 303
>gi|187928156|ref|YP_001898643.1| GTP-binding protein EngA [Ralstonia pickettii 12J]
gi|238691801|sp|B2U9V3.1|DER_RALPJ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|187725046|gb|ACD26211.1| small GTP-binding protein [Ralstonia pickettii 12J]
Length = 447
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/198 (41%), Positives = 105/198 (53%), Gaps = 37/198 (18%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+ P +A+VGRPNVGKS LFNRL A+V D PG+TRDR YG G+ F+ +DTGG
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADIPGLTRDRHYGEGRVGDRPFIAIDTGGF 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
V+K EGI VA M +Q A+ E+ V+IF+VD
Sbjct: 61 EPVAK-----------------EGI--------VAEMA----KQTRQAVVEADVVIFIVD 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ GL D IAD+LRK + I+LAVNK E R + S+F+ LG P ISA
Sbjct: 92 GRLGLAPQDRVIADYLRKT--GRRILLAVNKAEGMRYTAV-ASDFYELGLGDPAAISAAH 148
Query: 341 GTGTGEL----LDLVCSE 354
G G +L LDL +E
Sbjct: 149 GDGVNDLVAEALDLAFAE 166
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 70/151 (46%), Gaps = 29/151 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R+AIVGRPNVGKS L N L+G R I D PG TRD +Y + L+DT G+
Sbjct: 182 RIAIVGRPNVGKSTLVNALIGEERVIAFDMPGTTRDAIYVDFERNGKPYTLIDTAGLRKR 241
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K I E ++ T+ +I ++ V++ ++D Q
Sbjct: 242 GKVFEAI-EKFSVVKTL--------------------------QSIADANVVVLILDAQQ 274
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCES 315
++ D IA ++ ++ + +++ VNK +
Sbjct: 275 DISDQDAHIAGFIVES--GRALVIGVNKWDG 303
>gi|84387629|ref|ZP_00990646.1| GTP-binding protein EngA [Vibrio splendidus 12B01]
gi|84377474|gb|EAP94340.1| GTP-binding protein EngA [Vibrio splendidus 12B01]
Length = 493
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 109/196 (55%), Gaps = 40/196 (20%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YG + + EH+F+++DTGG+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGHAHFSEHDFIVIDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+G T E +M Q+ AAI+E+ V++F+VD
Sbjct: 61 ----------------------DG----TEEGVETKMAE----QSLAAIDEADVVLFMVD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSPL-PIS 337
G+AGLT +D IA LR+ ++K +L VNK + GI ++FW LG + I+
Sbjct: 91 GRAGLTPSDVAIAKHLRQ--LEKPSMLVVNKVD----GIDPDAASADFWQLGVEDMYQIA 144
Query: 338 AISGTGTGELLDLVCS 353
A G G L+DL +
Sbjct: 145 AAHGRGVTALIDLALN 160
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 96/206 (46%), Gaps = 36/206 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS L NR++G R +V D PG TRD +Y E E++L+DT GV
Sbjct: 207 KLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMQRDEREYVLIDTAGV--- 263
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + NI E + + + + AIE++ V++ L+D +
Sbjct: 264 -RRRKNINETVEKFSVV-----------------------KTLKAIEDANVVLLLIDARD 299
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSEFWSLGFSPLP----IS 337
++ D + + + I++AVNK +S K ++ LGF IS
Sbjct: 300 NISDQDLSLLGFALN--AGRSIVIAVNKWDGLDSDVKDRVKKELDRRLGFVDFARIHFIS 357
Query: 338 AISGTGTGELLDLVCSELKKVEVCIG 363
A+ GTG G L + V K +G
Sbjct: 358 ALHGTGVGHLFESVQEAYKSATTRVG 383
>gi|78066578|ref|YP_369347.1| GTP-binding protein EngA [Burkholderia sp. 383]
gi|123728977|sp|Q39FR3.1|DER_BURS3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|77967323|gb|ABB08703.1| Small GTP-binding protein [Burkholderia sp. 383]
Length = 445
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 101/189 (53%), Gaps = 33/189 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+ P +A+VGRPNVGKS LFNRL A+V D PG+TRDR YG GE +++VDTGG
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPYLVVDTGGF 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
V+K I+ ++A RQ A+EE+ V++F+VD
Sbjct: 61 EPVAKD--GILHEMA---------------------------RQTRQAVEEADVVVFIVD 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ GL D+ IAD+LRK + I L VNK E K ++F+ LG P ISA
Sbjct: 92 GRNGLAPQDKSIADYLRKT--GRPIFLVVNKAEG-MKYTAVATDFYELGLGDPRAISAAH 148
Query: 341 GTGTGELLD 349
G G ++++
Sbjct: 149 GDGVTDMIN 157
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 85/192 (44%), Gaps = 38/192 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVGRPNVGKS L N L+G +R I D PG TRD +Y ++ L+DT G+
Sbjct: 181 KIAIVGRPNVGKSTLVNALIGEDRVIAFDMPGTTRDSIYVDFERNGKKYTLIDTAGLRRR 240
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K I E ++ T+ +I ++ V+I L+D Q
Sbjct: 241 GKVFEAI-EKFSVVKTL--------------------------QSISDANVVILLLDAQQ 273
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCES--------PRKGIMQVSEFWSLGFSPLPI 336
++ D IA ++ + + +++ VNK + + + + +F S I
Sbjct: 274 DISDQDAHIAGFVVEQ--GRALVIGVNKWDGLDEHARDRAKADLTRKLKFLDFAKSHY-I 330
Query: 337 SAISGTGTGELL 348
SA TG G L+
Sbjct: 331 SAAKKTGIGALM 342
>gi|218708645|ref|YP_002416266.1| GTP-binding protein EngA [Vibrio splendidus LGP32]
gi|407071970|ref|ZP_11102808.1| GTP-binding protein Der [Vibrio cyclitrophicus ZF14]
gi|254783178|sp|B7VJU2.1|DER_VIBSL RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|218321664|emb|CAV17618.1| GTP-binding protein engA [Vibrio splendidus LGP32]
Length = 493
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 109/196 (55%), Gaps = 40/196 (20%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YG + + EH+F+++DTGG+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGHAHFSEHDFIVIDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+G T E +M Q+ AAI+E+ V++F+VD
Sbjct: 61 ----------------------DG----TEEGVETKMAE----QSLAAIDEADVVLFMVD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSPL-PIS 337
G+AGLT +D IA LR+ ++K +L VNK + GI ++FW LG + I+
Sbjct: 91 GRAGLTPSDVAIAKHLRQ--LEKPSMLVVNKVD----GIDPDAASADFWQLGVEDMYQIA 144
Query: 338 AISGTGTGELLDLVCS 353
A G G L+DL +
Sbjct: 145 AAHGRGVTALIDLALN 160
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 36/206 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS L NR++G R +V D PG TRD +Y E E++L+DT GV
Sbjct: 207 KLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMQRDEREYVLIDTAGV--- 263
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + NI E + + + + AIE++ V++ L+D +
Sbjct: 264 -RRRKNINETVEKFSVV-----------------------KTLKAIEDANVVLLLIDARE 299
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSEFWSLGFSPLP----IS 337
++ D + + + I++AVNK ++ K ++ LGF IS
Sbjct: 300 NISDQDLSLLGFALN--AGRSIVIAVNKWDGLDNDVKDRVKKELDRRLGFVDFARIHFIS 357
Query: 338 AISGTGTGELLDLVCSELKKVEVCIG 363
A+ GTG G L + V K +G
Sbjct: 358 ALHGTGVGHLFESVQEAYKSATTRVG 383
>gi|86145598|ref|ZP_01063928.1| GTP-binding protein EngA [Vibrio sp. MED222]
gi|85836569|gb|EAQ54695.1| GTP-binding protein EngA [Vibrio sp. MED222]
Length = 493
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 109/196 (55%), Gaps = 40/196 (20%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YG + + EH+F+++DTGG+
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGHAHFSEHDFIVIDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+G T E +M Q+ AAI+E+ V++F+VD
Sbjct: 61 ----------------------DG----TEEGVETKMAE----QSLAAIDEADVVLFMVD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSPL-PIS 337
G+AGLT +D IA LR+ ++K +L VNK + GI ++FW LG + I+
Sbjct: 91 GRAGLTPSDVAIAKHLRQ--LEKPSMLVVNKVD----GIDPDAASADFWQLGVEDMYQIA 144
Query: 338 AISGTGTGELLDLVCS 353
A G G L+DL +
Sbjct: 145 AAHGRGVTALIDLALN 160
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 36/206 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS L NR++G R +V D PG TRD +Y E E++L+DT GV
Sbjct: 207 KLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMQRDEREYVLIDTAGV--- 263
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + NI E + + + + AIE++ V++ L+D +
Sbjct: 264 -RRRKNINETVEKFSVV-----------------------KTLKAIEDANVVLLLIDARE 299
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSEFWSLGFSPLP----IS 337
++ D + + + I++AVNK ++ K ++ LGF IS
Sbjct: 300 NISDQDLSLLGFALN--AGRSIVIAVNKWDGLDNDVKDRVKKELDRRLGFVDFARIHFIS 357
Query: 338 AISGTGTGELLDLVCSELKKVEVCIG 363
A+ GTG G L + V K +G
Sbjct: 358 ALHGTGVGHLFESVQEAYKSATTRVG 383
>gi|227875339|ref|ZP_03993481.1| GTP-binding protein EngA [Mobiluncus mulieris ATCC 35243]
gi|227844244|gb|EEJ54411.1| GTP-binding protein EngA [Mobiluncus mulieris ATCC 35243]
Length = 517
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/196 (41%), Positives = 105/196 (53%), Gaps = 34/196 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS L NR++G A+V+DEPGVTRDR+ + W +F L+DTGG
Sbjct: 82 PTVAIVGRPNVGKSTLVNRILGRRVAVVLDEPGVTRDRVIYDADWNGRDFHLIDTGG--- 138
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+G++G+ + AVA QA AIE + V +F+VD
Sbjct: 139 ---------------WDVGVKGL-----DKAVA-------TQAEIAIEMADVSLFVVDAN 171
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G TA DE + LR + K +IL NK +S R S W+LG P PISA+ G
Sbjct: 172 VGATATDEAMMRLLRAS--KKPVILVANKVDSERAE-ADASGLWNLGLGEPYPISALHGR 228
Query: 343 GTGELLDLVCSELKKV 358
G GELLD++ L V
Sbjct: 229 GVGELLDVLLDALPPV 244
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 76/156 (48%), Gaps = 29/156 (18%)
Query: 159 PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDT 218
P PRVA+VGRPNVGKS+L N L G R++V D PG TRD + E++ VDT
Sbjct: 252 PADSTPRVALVGRPNVGKSSLLNSLAGSGRSVVSDTPGTTRDPVDEVLELDGKEWVFVDT 311
Query: 219 GGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIF 278
G+ I T+G A S++ +A +AIE + V +
Sbjct: 312 AGIKR------------RIKQTVG-------------ADYYSVL--RAQSAIESAEVALV 344
Query: 279 LVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
L+DG L+ D ++ + + ++ + ++L NK +
Sbjct: 345 LLDGGEPLSEQDVKVVNLVVES--GRALVLVNNKWD 378
>gi|334337007|ref|YP_004542159.1| GTP-binding protein engA [Isoptericola variabilis 225]
gi|334107375|gb|AEG44265.1| GTP-binding protein engA [Isoptericola variabilis 225]
Length = 523
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 101/197 (51%), Gaps = 34/197 (17%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
E LP +A+VGRPNVGKS L NR++G A+V D PGVTRDR+ + W F LVDTG
Sbjct: 85 ESPLPVLAVVGRPNVGKSTLVNRILGRREAVVEDTPGVTRDRVSYPAEWAGRRFTLVDTG 144
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G E VA + S + QA AIE + ++F+
Sbjct: 145 GW------------------------------EVDVAGIESKVAEQAEVAIELADAVVFV 174
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISA 338
VD G T+ DE + + LR++ K ++L NK + P G + W+LG P P+SA
Sbjct: 175 VDATVGATSTDERVVELLRRS--GKPVVLCANKVDGP-SGEADAAYLWALGLGEPHPVSA 231
Query: 339 ISGTGTGELLDLVCSEL 355
+ G GTG+LLD + L
Sbjct: 232 LHGRGTGDLLDAAMAVL 248
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 12/63 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRD------RMYGRSFWGEHEFMLVDT 218
RVA+VGRPNVGKS+L N++ G R +V + G TRD + G +W VDT
Sbjct: 264 RVALVGRPNVGKSSLLNKIAGAERVVVDELAGTTRDPVDELVEIKGVPYW------FVDT 317
Query: 219 GGV 221
G+
Sbjct: 318 AGI 320
>gi|336320772|ref|YP_004600740.1| ribosome-associated GTPase EngA [[Cellvibrio] gilvus ATCC 13127]
gi|336104353|gb|AEI12172.1| ribosome-associated GTPase EngA [[Cellvibrio] gilvus ATCC 13127]
Length = 491
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 101/197 (51%), Gaps = 34/197 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AIVGRPNVGKS L NR++G A+V D+PGVTRDR+ + W FM+VDTGG
Sbjct: 56 LPVLAIVGRPNVGKSTLVNRVIGRREAVVEDKPGVTRDRVSYPAEWAGRRFMVVDTGGW- 114
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
E VA + + + QA AI + ++F+VD
Sbjct: 115 -----------------------------EVDVAGIDARVAEQAEVAIALADAVVFVVDA 145
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
G T DE++ LR+ K ++L NK + P G + W+LG P P+SA+ G
Sbjct: 146 TVGSTDTDEQVVRLLRR--AGKPVVLCANKVDGP-AGEADAAALWALGLGEPYPVSALHG 202
Query: 342 TGTGELLDLVCSELKKV 358
GTG+LLD V L +V
Sbjct: 203 RGTGDLLDAVLDALPEV 219
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 27/36 (75%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRD 200
RVA+VGRPNVGKS+L N++ G R +V + G TRD
Sbjct: 232 RVALVGRPNVGKSSLLNKVAGTQRVVVDEIAGTTRD 267
>gi|339326391|ref|YP_004686084.1| GTPase Der [Cupriavidus necator N-1]
gi|338166548|gb|AEI77603.1| GTPase Der [Cupriavidus necator N-1]
Length = 456
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 100/189 (52%), Gaps = 33/189 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+ P +A+VGRPNVGKS LFNR+ A+V D PG+TRDR YG GE F+ +DTGG
Sbjct: 10 MKPVIALVGRPNVGKSTLFNRMTRSRDALVADLPGLTRDRHYGEGRIGERPFIAIDTGGF 69
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
V K EGI VA M +Q A+ E+ V+IF+VD
Sbjct: 70 EPVVK-----------------EGI--------VAEMA----KQTKQAVVEADVVIFIVD 100
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ GL D IAD+LRK + I+LAVNK E K ++F+ LG P ISA
Sbjct: 101 GRLGLAPQDRAIADYLRKT--GRRIMLAVNKAEG-MKYTSVAADFYELGMGDPYAISAAH 157
Query: 341 GTGTGELLD 349
G G EL+D
Sbjct: 158 GDGVSELVD 166
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 71/151 (47%), Gaps = 29/151 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVGRPNVGKS L N L+G R I D PG TRD +Y G + L+DT G+
Sbjct: 191 KIAIVGRPNVGKSTLVNTLIGEERVIAFDMPGTTRDAIYVEFERGGKPYTLIDTAGLRRR 250
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K I E ++ T+ +I ++ V+I L+D Q
Sbjct: 251 GKVFEAI-EKFSVVKTL--------------------------QSIADANVVILLLDAQQ 283
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCES 315
++ D IA ++ ++ + +++ VNK +
Sbjct: 284 DISEQDAHIAGFIVES--GRALVVGVNKWDG 312
>gi|85059734|ref|YP_455436.1| GTP-binding protein EngA [Sodalis glossinidius str. 'morsitans']
gi|123519082|sp|Q2NS44.1|DER_SODGM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|84780254|dbj|BAE75031.1| putative GTP-binding protein [Sodalis glossinidius str.
'morsitans']
Length = 488
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/195 (39%), Positives = 104/195 (53%), Gaps = 40/195 (20%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR Y R+ W HEF+++DTGG+
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYCRAEWEGHEFIVIDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
T E RM Q+ AIEE+ +++F+VD
Sbjct: 61 D--------------------------GTEEGVETRMAG----QSLVAIEEADIVLFMVD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSPL-PIS 337
G+AGL AAD+ IA LR +K ++ NK + GI V +F+SLG + PI+
Sbjct: 91 GRAGLMAADKGIARHLRSR--EKTTVIVANKTD----GIDADSAVGDFYSLGMGEIVPIA 144
Query: 338 AISGTGTGELLDLVC 352
A G G LL+ V
Sbjct: 145 ASHGRGINSLLEQVL 159
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 98/200 (49%), Gaps = 36/200 (18%)
Query: 159 PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDT 218
P+ L ++AIVGRPNVGKS L NR++G R +V D PG TRD +Y E E++L+DT
Sbjct: 196 PQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMVRDEREYVLIDT 255
Query: 219 GGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIF 278
GV K + E ++ T+ AIE++ V++
Sbjct: 256 AGVRKRGKVTETV-EKFSVIKTL--------------------------QAIEDANVVLL 288
Query: 279 LVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCE---SPRKGIMQVSEFWSLGFSPLP 335
++D + G++ D + ++ + + +++AVNK + S + ++ + LGF
Sbjct: 289 VIDAREGISDQDLSLLGFILNS--GRSLVIAVNKWDGLSSETRDEVKEALDHRLGFIDFA 346
Query: 336 ----ISAISGTGTGELLDLV 351
ISA+ G+G G L + V
Sbjct: 347 RVHFISALHGSGVGNLFESV 366
>gi|254248074|ref|ZP_04941395.1| Small GTP-binding protein domain [Burkholderia cenocepacia PC184]
gi|124872850|gb|EAY64566.1| Small GTP-binding protein domain [Burkholderia cenocepacia PC184]
Length = 445
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 101/189 (53%), Gaps = 33/189 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+ P +A+VGRPNVGKS LFNRL A+V D PG+TRDR YG GE +++VDTGG
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPYLIVDTGGF 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
V+K I+ ++A RQ A+EE+ V++F+VD
Sbjct: 61 EPVAKD--GILHEMA---------------------------RQTRQAVEEADVVVFIVD 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ GL D+ IAD+LRK + I L VNK E K ++F+ LG P ISA
Sbjct: 92 GRNGLAPQDKSIADYLRKT--GRPIFLVVNKAEG-MKYTAVATDFYELGLGDPRAISAAH 148
Query: 341 GTGTGELLD 349
G G ++++
Sbjct: 149 GDGVTDMIN 157
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 85/192 (44%), Gaps = 38/192 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVGRPNVGKS L N L+G +R I D PG TRD +Y ++ L+DT G+
Sbjct: 181 KIAIVGRPNVGKSTLVNALIGEDRVIAFDMPGTTRDSIYVDFERNGKKYTLIDTAGLRRR 240
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K I E ++ T+ +I ++ V+I L+D Q
Sbjct: 241 GKVFEAI-EKFSVVKTL--------------------------QSISDANVVILLLDAQQ 273
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCES--------PRKGIMQVSEFWSLGFSPLPI 336
++ D IA ++ + + +++ VNK + + + + +F S I
Sbjct: 274 DISDQDAHIAGFVVEQ--GRALVIGVNKWDGLDDHARDRAKADLTRKLKFLDFAKSHF-I 330
Query: 337 SAISGTGTGELL 348
SA TG G L+
Sbjct: 331 SAAKKTGIGALM 342
>gi|306818602|ref|ZP_07452325.1| ribosome-associated GTPase EngA [Mobiluncus mulieris ATCC 35239]
gi|304648775|gb|EFM46077.1| ribosome-associated GTPase EngA [Mobiluncus mulieris ATCC 35239]
Length = 526
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/196 (41%), Positives = 105/196 (53%), Gaps = 34/196 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS L NR++G A+V+DEPGVTRDR+ + W +F L+DTGG
Sbjct: 91 PTVAIVGRPNVGKSTLVNRILGRRVAVVLDEPGVTRDRVIYDADWNGRDFHLIDTGG--- 147
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+G++G+ + AVA QA AIE + V +F+VD
Sbjct: 148 ---------------WDVGVKGL-----DKAVA-------TQAEIAIEMADVSLFVVDAN 180
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G TA DE + LR + K +IL NK +S R S W+LG P PISA+ G
Sbjct: 181 VGATATDEAMMRLLRAS--KKPVILVANKVDSERAE-ADASGLWNLGLGEPYPISALHGR 237
Query: 343 GTGELLDLVCSELKKV 358
G GELLD++ L V
Sbjct: 238 GVGELLDVLLDALPPV 253
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 76/156 (48%), Gaps = 29/156 (18%)
Query: 159 PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDT 218
P PRVA+VGRPNVGKS+L N L G R++V D PG TRD + E++ VDT
Sbjct: 261 PADSTPRVALVGRPNVGKSSLLNSLAGSGRSVVSDTPGTTRDPVDEVLELDGKEWVFVDT 320
Query: 219 GGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIF 278
G+ I T+G A S++ +A +AIE + V +
Sbjct: 321 AGIKR------------RIKQTVG-------------ADYYSVL--RAQSAIESAEVALV 353
Query: 279 LVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
L+DG L+ D ++ + + ++ + ++L NK +
Sbjct: 354 LLDGGEPLSEQDVKVVNLVVES--GRALVLVNNKWD 387
>gi|444426825|ref|ZP_21222229.1| GTP-binding protein Der [Vibrio campbellii CAIM 519 = NBRC 15631]
gi|444239923|gb|ELU51476.1| GTP-binding protein Der [Vibrio campbellii CAIM 519 = NBRC 15631]
Length = 498
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 107/193 (55%), Gaps = 41/193 (21%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWG-EHEFMLVDTGG 220
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YG++ G EHEF+++DTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQARLGEEHEFIVIDTGG 60
Query: 221 VLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLV 280
+ T E +M Q+ AAI+E+ V++FLV
Sbjct: 61 I--------------------------DGTEEGVETKMAE----QSLAAIDEADVVLFLV 90
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSPL-PI 336
DG+AGLT +DE IA LRK ++K +L VNK + GI ++FW LG + I
Sbjct: 91 DGRAGLTPSDEAIAAHLRK--IEKPAMLVVNKID----GIDADAACADFWQLGVDDMYQI 144
Query: 337 SAISGTGTGELLD 349
+A G G LL+
Sbjct: 145 AAAHGRGVTALLE 157
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 99/220 (45%), Gaps = 40/220 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS L NR++G R +V D PG TRD +Y E++L+DT GV
Sbjct: 211 KLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRRR 270
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + E ++ T+ A+E++ V++ ++D +
Sbjct: 271 GRINETV-EKFSVVKTL--------------------------KAVEDANVVLLVIDARE 303
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSEFWSLGFSPLP----IS 337
++ D + + + I+LAVNK ++ K ++ LGF IS
Sbjct: 304 NISDQDLSLLGFALN--AGRSIVLAVNKWDGLDNEVKENVKKELDRRLGFVDFARIHFIS 361
Query: 338 AISGTGTGELLDLVCSELKKVEVCIGFLLICNAITKIFHI 377
A+ GTG G L + + K +G + +T+I +
Sbjct: 362 ALHGTGVGHLFESIQEAYKSATTRVG----TSVLTRIMKM 397
>gi|300087240|ref|YP_003757762.1| ribosome-associated GTPase EngA [Dehalogenimonas
lykanthroporepellens BL-DC-9]
gi|299526973|gb|ADJ25441.1| ribosome-associated GTPase EngA [Dehalogenimonas
lykanthroporepellens BL-DC-9]
Length = 439
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 103/194 (53%), Gaps = 32/194 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGR NVGKS L NRL G +AI D PG TRDRMY EF+LVDTGG
Sbjct: 4 LPSVAIVGRQNVGKSTLLNRLTGRRQAITQDLPGTTRDRMYVPVSHSGREFLLVDTGG-- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+A + P++ E Q A+ E+ VI+FL +
Sbjct: 62 -------------------------MAGGDTGDVFTPAVNE-QVRIAMREASVIVFLTEA 95
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ GLT DEEIA+ +R++ K +IL VNK ++ R+G + EF +LG P+P+SA G
Sbjct: 96 RFGLTPQDEEIAEEVRRS--SKPVILVVNKVDNDRQGHHAI-EFHALGMGEPVPVSAYHG 152
Query: 342 TGTGELLDLVCSEL 355
GT LLD V L
Sbjct: 153 RGTDALLDRVVELL 166
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 93/199 (46%), Gaps = 42/199 (21%)
Query: 159 PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDT 218
PE L R+AI GR NVGKS+L N LVG +RAIV PG TRD + +G +L+DT
Sbjct: 176 PERL--RIAIAGRANVGKSSLLNTLVGEDRAIVSPVPGTTRDAVDTPIDFGTGGVVLIDT 233
Query: 219 GGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIF 278
G+ + + + E I ++ AI+ + V++
Sbjct: 234 AGIRRRGRIERGVEEYSVI---------------------------RSLHAIDRADVVLI 266
Query: 279 LVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF-----WSLGFSP 333
++D TA D IA + R+ + +IL VNK + ++ + ++EF F P
Sbjct: 267 VLDAGEPATAQDTHIAGYAREKC--RGLILVVNKSDLLKE--VDMAEFDKNMASRFKFIP 322
Query: 334 ----LPISAISGTGTGELL 348
+ +SA+SG G +++
Sbjct: 323 YARQINVSALSGEGVDKII 341
>gi|390445558|ref|ZP_10233297.1| GTP-binding protein engA [Nitritalea halalkaliphila LW7]
gi|389661760|gb|EIM73357.1| GTP-binding protein engA [Nitritalea halalkaliphila LW7]
Length = 437
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 103/194 (53%), Gaps = 35/194 (18%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS FNRLV +AI + GVTRDR YG + WG F ++DTGG + S
Sbjct: 5 VAIVGRPNVGKSTFFNRLVEERKAIEDNMSGVTRDRHYGHATWGGKFFSVIDTGGYVTGS 64
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
++ E S I +Q AIEE+ VI+F+VD G
Sbjct: 65 D---DVYE--------------------------SEIRKQVKLAIEEATVILFVVDCHDG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP---LPISAISGT 342
LT D+E A+ LR K I + NK ++ + I+ +EF+ LG PI+A+SG
Sbjct: 96 LTDLDKEFANELRGT--KKPIYVVANKADTSDR-ILGSAEFYGLGLGDNDVFPIAAVSGA 152
Query: 343 GTGELLDLVCSELK 356
GTG+LLD V L+
Sbjct: 153 GTGDLLDEVIKHLQ 166
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 81/156 (51%), Gaps = 29/156 (18%)
Query: 159 PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDT 218
P+ +P++AI+GRPNVGKS+ N L+G R+IV +E G TRD ++ R ++F++ DT
Sbjct: 173 PDEGIPKIAILGRPNVGKSSFLNALLGKERSIVTNEAGTTRDAIHTRYKLYGNDFIITDT 232
Query: 219 GGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIF 278
G+ + + + ED+ + + ++ +E S V+I
Sbjct: 233 AGI----RKKAKVKEDIEFYSVM-----------------------RSIRTLENSDVLII 265
Query: 279 LVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
++D + GL A D + + KN +K I++ VNK +
Sbjct: 266 IIDAERGLEAQDVNLINLGIKN--NKGIMIMVNKWD 299
>gi|113868334|ref|YP_726823.1| GTP-binding protein EngA [Ralstonia eutropha H16]
gi|113527110|emb|CAJ93455.1| GTP-binding protein [Ralstonia eutropha H16]
Length = 456
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 100/189 (52%), Gaps = 33/189 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+ P +A+VGRPNVGKS LFNR+ A+V D PG+TRDR YG GE F+ +DTGG
Sbjct: 10 MKPVIALVGRPNVGKSTLFNRMTRSRDALVADLPGLTRDRHYGEGRIGERPFIAIDTGGF 69
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
V K EGI VA M +Q A+ E+ V+IF+VD
Sbjct: 70 EPVVK-----------------EGI--------VAEMA----KQTKQAVVEADVVIFIVD 100
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ GL D IAD+LRK + I+LAVNK E K ++F+ LG P ISA
Sbjct: 101 GRLGLAPQDRAIADYLRKT--GRRIMLAVNKAEG-MKYTSVAADFYELGMGDPYAISAAH 157
Query: 341 GTGTGELLD 349
G G EL+D
Sbjct: 158 GDGVSELVD 166
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 71/151 (47%), Gaps = 29/151 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVGRPNVGKS L N L+G R I D PG TRD +Y G + L+DT G+
Sbjct: 191 KIAIVGRPNVGKSTLVNTLIGEERVIAFDMPGTTRDAIYVEFERGGKPYTLIDTAGLRRR 250
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K I E ++ T+ +I ++ V+I L+D Q
Sbjct: 251 GKVFEAI-EKFSVVKTL--------------------------QSIADANVVILLLDAQQ 283
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCES 315
++ D IA ++ ++ + +++ VNK +
Sbjct: 284 DISDQDAHIAGFIVES--GRALVVGVNKWDG 312
>gi|326797802|ref|YP_004315621.1| GTP-binding protein engA [Sphingobacterium sp. 21]
gi|326548566|gb|ADZ76951.1| GTP-binding protein engA [Sphingobacterium sp. 21]
Length = 433
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/195 (39%), Positives = 109/195 (55%), Gaps = 33/195 (16%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+AIVGRPNVGKS L+NRL +AIV D GVTRDR YG++ W F ++DTGG ++ S
Sbjct: 5 IAIVGRPNVGKSTLYNRLTESRKAIVDDMSGVTRDRHYGQAEWVGKTFTVIDTGGYVHGS 64
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
ED+ EAA I Q AIEE+ VI+F+VD G
Sbjct: 65 -------EDIF---------------EAA-------IREQVLIAIEEASVILFMVDVTVG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGTGT 344
+T D++IA LR++ +K + + VNK + + S F++LG + IS+++G+GT
Sbjct: 96 ITDLDDDIAHLLRRS--NKPVFVVVNKVDHHQLH-TDASTFYALGLGEIYNISSMTGSGT 152
Query: 345 GELLDLVCSELKKVE 359
GELLD V +V+
Sbjct: 153 GELLDEVVKHFDEVQ 167
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 73/152 (48%), Gaps = 29/152 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP+ AIVGRPNVGKS+ N L+G R IV G TRD + HEFML+DT G+
Sbjct: 173 LPKYAIVGRPNVGKSSFINALIGKERNIVTPIAGTTRDSIQIHYNQFGHEFMLIDTAGLR 232
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+K + NI E ++ TI A+EE+ V+I ++D
Sbjct: 233 RKTKVKENI-EFYSVMRTI--------------------------KALEEADVVILMIDA 265
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
GL + D I KN K ++L VNK +
Sbjct: 266 TEGLESQDVNIFHLAEKN--KKGVVLLVNKWD 295
>gi|402566392|ref|YP_006615737.1| GTP-binding protein EngA [Burkholderia cepacia GG4]
gi|402247589|gb|AFQ48043.1| GTP-binding protein EngA [Burkholderia cepacia GG4]
Length = 445
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 101/189 (53%), Gaps = 33/189 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+ P +A+VGRPNVGKS LFNRL A+V D PG+TRDR YG GE +++VDTGG
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPYLVVDTGGF 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
V+K I+ ++A RQ A+EE+ V++F+VD
Sbjct: 61 EPVAKD--GILHEMA---------------------------RQTRQAVEEADVVVFIVD 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ GL D+ IAD+LRK + I L VNK E K ++F+ LG P ISA
Sbjct: 92 GRNGLAPQDKSIADYLRKT--GRPIFLVVNKAEG-MKYTAVATDFYELGLGDPRAISAAH 148
Query: 341 GTGTGELLD 349
G G ++++
Sbjct: 149 GDGVTDMIN 157
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 85/192 (44%), Gaps = 38/192 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVGRPNVGKS L N L+G +R I D PG TRD +Y ++ L+DT G+
Sbjct: 181 KIAIVGRPNVGKSTLVNALIGEDRVIAFDMPGTTRDSIYVDFERNGKKYTLIDTAGLRRR 240
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K I E ++ T+ +I ++ V+I L+D Q
Sbjct: 241 GKVFEAI-EKFSVVKTL--------------------------QSISDANVVILLLDAQQ 273
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCES--------PRKGIMQVSEFWSLGFSPLPI 336
++ D IA ++ + + +++ VNK + + + + +F S I
Sbjct: 274 DISDQDAHIAGFVVEQ--GRALVIGVNKWDGLDDHARDRAKADLTRKLKFLDFAKSHY-I 330
Query: 337 SAISGTGTGELL 348
SA TG G L+
Sbjct: 331 SAAKKTGIGALM 342
>gi|363897230|ref|ZP_09323769.1| GTP-binding protein engA [Oribacterium sp. ACB7]
gi|361958727|gb|EHL12024.1| GTP-binding protein engA [Oribacterium sp. ACB7]
Length = 441
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 104/193 (53%), Gaps = 32/193 (16%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VA+VGRPNVGKS LFN + G +IV D PGVTRDR+Y + W + F LVDTGG+ VS
Sbjct: 6 VAVVGRPNVGKSTLFNTIAGKQISIVQDTPGVTRDRIYAEASWLNYHFTLVDTGGIEPVS 65
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+D+ + + QA AIE + VIIF+ D ++G
Sbjct: 66 -------DDILL----------------------KQMRSQAELAIETADVIIFVTDVRSG 96
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+ AD E+A+ LRK+ K ++L VNK +S +K + EF+SL P +S+ + G
Sbjct: 97 VVDADYEVANMLRKS--KKPVVLCVNKVDSVKKFGNDIYEFYSLALGEPFAVSSANHMGI 154
Query: 345 GELLDLVCSELKK 357
G+LL+ V K
Sbjct: 155 GDLLEEVVKHFPK 167
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 92/196 (46%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++A++G+PNVGKS+L N+L+G NR IV D G TRD + ++ +DT G+
Sbjct: 179 KIALIGKPNVGKSSLTNKLLGENRVIVSDIAGTTRDAIDTEIIHNGVPYVFIDTAGL--- 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E++ + I + +A++ + + I L+D
Sbjct: 236 -RRKGRVTEEIERYSVI-----------------------RTVSAVDRADICIVLLDATE 271
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSEFWSLGFSP------LP 335
G+T D IA ++ K +ILAVNK E K + + ++ FS L
Sbjct: 272 GITDGDTRIAGIAHES--GKGVILAVNKWDLVEKDDKTMQEFTKKLREKFSYMDYAEILF 329
Query: 336 ISAISGTGTGELLDLV 351
ISA +G T ++ ++V
Sbjct: 330 ISAETGQRTQKIFEMV 345
>gi|17545938|ref|NP_519340.1| GTP-binding protein EngA [Ralstonia solanacearum GMI1000]
gi|26006721|sp|Q8Y026.1|DER_RALSO RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|17428233|emb|CAD14921.1| putative gtp-binding protein [Ralstonia solanacearum GMI1000]
Length = 447
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 101/189 (53%), Gaps = 33/189 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+ P +A+VGRPNVGKS LFNRL A+V D PG+TRDR YG GE F+ +DTGG
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADMPGLTRDRHYGEGRVGERPFIAIDTGGF 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
V+K EGI VA M +Q A+ E+ V+IF+VD
Sbjct: 61 EPVAK-----------------EGI--------VAEMA----KQTRQAVVEADVVIFIVD 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ GL D IAD+LRK + I+LAVNK E K ++F+ LG P IS+
Sbjct: 92 GRLGLAPQDRVIADYLRKT--GRRILLAVNKAEG-MKYTAVATDFYELGLGDPRAISSAH 148
Query: 341 GTGTGELLD 349
G G EL+D
Sbjct: 149 GDGVRELVD 157
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 86/194 (44%), Gaps = 36/194 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R+AIVGRPNVGKS L N L+G R I D PG TRD +Y + L+DT G+
Sbjct: 182 RIAIVGRPNVGKSTLVNALIGEERVIAFDMPGTTRDAIYVDFERNGKPYTLIDTAGLRKR 241
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K I E ++ T+ +I ++ V++ L+D Q
Sbjct: 242 GKVFEAI-EKFSVVKTL--------------------------QSIADANVVVLLLDAQQ 274
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCES----PRKGIMQVSE--FWSLGFSPLP-IS 337
++ D IA ++ ++ + +++ VNK + R I E L F+ + IS
Sbjct: 275 DISDQDAHIAGFIVES--GRALVIGVNKWDGLDGHARDRIKHDMERKLQFLSFANVHYIS 332
Query: 338 AISGTGTGELLDLV 351
A TG G L+ V
Sbjct: 333 AKQRTGIGALMKSV 346
>gi|255533659|ref|YP_003094031.1| small GTP-binding protein [Pedobacter heparinus DSM 2366]
gi|255346643|gb|ACU05969.1| small GTP-binding protein [Pedobacter heparinus DSM 2366]
Length = 433
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/196 (39%), Positives = 109/196 (55%), Gaps = 37/196 (18%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+AIVGRPNVGKS LFNRL +AIV D GVTRDR YG + W + +F ++DTGG + S
Sbjct: 5 IAIVGRPNVGKSTLFNRLTESRKAIVDDFSGVTRDRHYGVAEWTDKQFTVIDTGGYVANS 64
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
ED+ EAA I Q AIEE+ V++F+VD G
Sbjct: 65 -------EDVF---------------EAA-------IREQVIIAIEEATVLLFMVDVTTG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQ--VSEFWSLGFSPL-PISAISGT 342
+T D+EIA LR++ FI+ VNK ++ + +Q + F+ G + PIS+++G+
Sbjct: 96 ITDLDDEIAQLLRRSKKPVFIV--VNKVDNTQ---LQNDAAVFYGFGLGEIHPISSMTGS 150
Query: 343 GTGELLDLVCSELKKV 358
GTG+LLD V + V
Sbjct: 151 GTGDLLDEVIKHFEDV 166
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 91/202 (45%), Gaps = 35/202 (17%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
E+ LP++ IVGRPNVGKS+L N L+G R IV G TRD ++ HEFM +DT
Sbjct: 170 ENALPKITIVGRPNVGKSSLINALMGKERNIVTPIAGTTRDSIHIHYNQFGHEFMFIDTA 229
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G+ +K + NI E ++ TI A+EE+ V+I +
Sbjct: 230 GLRKKTKVKENI-EFYSVMRTI--------------------------KALEEADVVILM 262
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS------LGFSP 333
+D GL + D I KN K I++ VNK + K V+ F F+
Sbjct: 263 IDAMEGLESQDVNIFHLAEKN--KKGIVILVNKWDLVEKNSKTVNIFEDQIRQKLQPFTD 320
Query: 334 LPISAISGTGTGELLDLVCSEL 355
+PI IS + V + L
Sbjct: 321 IPIIFISALNKQRIFQAVETAL 342
>gi|427401453|ref|ZP_18892525.1| GTPase Der [Massilia timonae CCUG 45783]
gi|425719562|gb|EKU82494.1| GTPase Der [Massilia timonae CCUG 45783]
Length = 445
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 104/189 (55%), Gaps = 33/189 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+ P +A+VGRPNVGKS LFNRL A+V D PG+TRDR YG GE F+++DTGG
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRIGERPFLVIDTGGF 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
V+K IM ++A+ T RQA A E+ V++F+VD
Sbjct: 61 EPVAKE--GIMHEMALQT------------------------RQAVA---EADVVVFIVD 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ GLT D+ I D+LRK+ + ++L VNK E K ++F+ LG P ISA
Sbjct: 92 GRQGLTPHDKTITDYLRKS--GRKVMLVVNKSEG-MKYTSVTADFYELGMGDPYVISAAH 148
Query: 341 GTGTGELLD 349
G G +L++
Sbjct: 149 GDGVHDLVN 157
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 95/207 (45%), Gaps = 41/207 (19%)
Query: 159 PEHLLP-----RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEF 213
PE L P ++AIVGRPNVGKS L N LVG R I D PG TRD + ++
Sbjct: 171 PEELEPADHGFKIAIVGRPNVGKSTLINTLVGEQRVIAFDMPGTTRDAIEVPFERDGKKY 230
Query: 214 MLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEES 273
L+DT G+ K I E ++ T+ +I ++
Sbjct: 231 TLIDTAGIRRRGKIFEAI-EKFSVVKTM--------------------------QSISDA 263
Query: 274 CVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIM-QVS-----EFW 327
V+I L+D Q ++ D IA ++ ++ + +++AVNK + + QV +
Sbjct: 264 NVVILLLDAQQDISEQDAHIAGFILES--GRALVVAVNKWDGLQTDQRDQVKNDLDRKLD 321
Query: 328 SLGFSPLP-ISAISGTGTGELLDLVCS 353
LGF+ +SA+ GTG +LL V S
Sbjct: 322 FLGFAKTHFVSALRGTGISQLLKSVES 348
>gi|74316616|ref|YP_314356.1| GTP-binding protein EngA [Thiobacillus denitrificans ATCC 25259]
gi|123773049|sp|Q3SL66.1|DER_THIDA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|74056111|gb|AAZ96551.1| GTP-binding protein [Thiobacillus denitrificans ATCC 25259]
Length = 469
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 103/188 (54%), Gaps = 33/188 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP + +VGRPNVGKS LFNRL G A+V D PG+TRDR YGR G +++VDTGG+
Sbjct: 1 MLPTLVLVGRPNVGKSTLFNRLTGTRDALVHDLPGMTRDRHYGRGRIGGKPYLVVDTGGL 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
V K I+ ++A RQ AI+E+ IIF+VD
Sbjct: 61 EPVVKD--GILAEMA---------------------------RQTLQAIDEADAIIFMVD 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
+AG+T D+ IAD LR+ + ++LAVNK E + ++ +EF LG PL IS
Sbjct: 92 ARAGVTPQDKVIADRLRR--VTSPVLLAVNKAEGMNRAVV-TAEFHELGLGEPLAISGAH 148
Query: 341 GTGTGELL 348
G G +L+
Sbjct: 149 GDGIADLV 156
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 76/153 (49%), Gaps = 29/153 (18%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
+P++A+VGRPNVGKS L N LVG R I D+PG TRD +Y G ++L+DT GV
Sbjct: 175 VPKIALVGRPNVGKSTLVNALVGAERVIAFDQPGTTRDSIYVDFERGGKPYVLIDTAGVR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K + E ++ T+ AIE++ V++ ++D
Sbjct: 235 RRGKVFETV-EKFSVIKTL--------------------------QAIEDANVVVLVLDA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCES 315
+ ++ D +A ++ + + +++A+NK +
Sbjct: 268 RENISEQDAHLAGFVLET--GRALVVAINKWDG 298
>gi|335045566|ref|ZP_08538589.1| ribosome biogenesis GTPase Der [Oribacterium sp. oral taxon 108
str. F0425]
gi|333759352|gb|EGL36909.1| ribosome biogenesis GTPase Der [Oribacterium sp. oral taxon 108
str. F0425]
Length = 441
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 104/193 (53%), Gaps = 32/193 (16%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VA+VGRPNVGKS LFN + G +IV D PGVTRDR+Y + W + F LVDTGG+ VS
Sbjct: 6 VAVVGRPNVGKSTLFNTIAGKQISIVQDTPGVTRDRIYAEASWLNYHFTLVDTGGIEPVS 65
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+D+ + + QA AIE + VIIF+ D ++G
Sbjct: 66 -------DDILL----------------------KQMRSQAELAIETADVIIFVTDVRSG 96
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
+ AD E+A+ LRK+ K ++L VNK +S +K + EF+SL P +S+ + G
Sbjct: 97 VVDADYEVANMLRKS--KKPVVLCVNKVDSVKKFGNDIYEFYSLALGEPFAVSSANHMGI 154
Query: 345 GELLDLVCSELKK 357
G+LL+ V K
Sbjct: 155 GDLLEEVVKHFPK 167
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 92/196 (46%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++A++G+PNVGKS+L N+L+G NR IV D G TRD + ++ +DT G+
Sbjct: 179 KIALIGKPNVGKSSLTNKLLGENRVIVSDIAGTTRDAIDTEIIHNGVPYVFIDTAGL--- 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E++ + I + +A++ + + I L+D
Sbjct: 236 -RRKGRVTEEIERYSVI-----------------------RTVSAVDRADICIVLLDATE 271
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSEFWSLGFSP------LP 335
G+T D IA ++ K +ILAVNK E K + + ++ FS L
Sbjct: 272 GITDGDTRIAGIAHES--GKGVILAVNKWDLVEKDDKTMQEFTKKLREKFSYMDYAEILF 329
Query: 336 ISAISGTGTGELLDLV 351
ISA +G T ++ ++V
Sbjct: 330 ISAETGQRTQKIFEMV 345
>gi|134295839|ref|YP_001119574.1| GTP-binding protein EngA [Burkholderia vietnamiensis G4]
gi|166224317|sp|A4JEN6.1|DER_BURVG RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|134138996|gb|ABO54739.1| small GTP-binding protein [Burkholderia vietnamiensis G4]
Length = 445
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 101/189 (53%), Gaps = 33/189 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+ P +A+VGRPNVGKS LFNRL A+V D PG+TRDR YG GE +++VDTGG
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPYLVVDTGGF 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
V+K I+ ++A RQ A+EE+ V++F+VD
Sbjct: 61 EPVAKD--GILHEMA---------------------------RQTRQAVEEADVVVFIVD 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ GL D+ IAD+LRK + I L VNK E K ++F+ LG P ISA
Sbjct: 92 GRNGLAPQDKSIADYLRKT--GRPIFLVVNKAEG-MKYTAVATDFYELGLGDPRAISAAH 148
Query: 341 GTGTGELLD 349
G G ++++
Sbjct: 149 GDGVTDMIN 157
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 85/192 (44%), Gaps = 38/192 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVGRPNVGKS L N L+G +R I D PG TRD +Y ++ L+DT G+
Sbjct: 181 KIAIVGRPNVGKSTLVNALIGEDRVIAFDMPGTTRDSIYVDFERNGKKYTLIDTAGLRRR 240
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K I E ++ T+ +I ++ V+I L+D Q
Sbjct: 241 GKVFEAI-EKFSVVKTL--------------------------QSISDANVVILLLDAQQ 273
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCES--------PRKGIMQVSEFWSLGFSPLPI 336
++ D IA ++ + + +++ VNK + + + + +F S I
Sbjct: 274 DISDQDAHIAGFVVEQ--GRALVIGVNKWDGLDDHARDRAKADLTRKLKFLDFAKSHY-I 330
Query: 337 SAISGTGTGELL 348
SA TG G L+
Sbjct: 331 SAAKKTGIGALM 342
>gi|297626315|ref|YP_003688078.1| GTP binding protein [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
gi|296922080|emb|CBL56648.1| GTP binding protein [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
Length = 449
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/195 (37%), Positives = 101/195 (51%), Gaps = 34/195 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS L NR++G A+V D PGVTRDR+ + W EF+LVDTGG +
Sbjct: 14 PVVAVVGRPNVGKSTLVNRILGRREAVVQDTPGVTRDRVSYDANWAGREFVLVDTGGWI- 72
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
A M + I QA AI+ + ++F+VD +
Sbjct: 73 -----------------------------AKAEGMSAHIAEQAEMAIQLADAVLFVVDAK 103
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT DE + LR++ K ++LA NK + R + S W LG P P+SA+ G
Sbjct: 104 VGLTDEDEAVVKVLRRS--GKPVVLAANKVDDERVE-AEASSLWQLGLGEPYPVSALHGR 160
Query: 343 GTGELLDLVCSELKK 357
G+G+LLD + L K
Sbjct: 161 GSGDLLDALVKVLPK 175
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 34/57 (59%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
RVAIVG+PNVGKS+L NRL R++V D G T D + F L+DT G+
Sbjct: 189 RVAIVGKPNVGKSSLLNRLASAQRSVVSDVSGTTVDPVDELVTIAGEPFRLIDTAGI 245
>gi|444371762|ref|ZP_21171295.1| ribosome-associated GTPase EngA [Burkholderia cenocepacia
K56-2Valvano]
gi|443594661|gb|ELT63296.1| ribosome-associated GTPase EngA [Burkholderia cenocepacia
K56-2Valvano]
Length = 445
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 101/189 (53%), Gaps = 33/189 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+ P +A+VGRPNVGKS LFNRL A+V D PG+TRDR YG GE +++VDTGG
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPYLVVDTGGF 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
V+K I+ ++A RQ A+EE+ V++F+VD
Sbjct: 61 EPVAKD--GILHEMA---------------------------RQTRQAVEEADVVVFIVD 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ GL D+ IAD+LRK + I L VNK E K ++F+ LG P ISA
Sbjct: 92 GRNGLAPQDKSIADYLRKT--GRPIFLVVNKAEG-MKYTAVATDFYELGLGDPRAISAAH 148
Query: 341 GTGTGELLD 349
G G ++++
Sbjct: 149 GDGVTDMIN 157
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 85/192 (44%), Gaps = 38/192 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVGRPNVGKS L N L+G +R I D PG TRD +Y ++ L+DT G+
Sbjct: 181 KIAIVGRPNVGKSTLVNALIGEDRVIAFDMPGTTRDSIYVDFERNGKKYTLIDTAGLRRR 240
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K I E ++ T+ +I ++ V+I L+D Q
Sbjct: 241 GKVFEAI-EKFSVVKTL--------------------------QSISDANVVILLLDAQQ 273
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCES--------PRKGIMQVSEFWSLGFSPLPI 336
++ D IA ++ + + +++ VNK + + + + +F S I
Sbjct: 274 DISDQDAHIAGFVVEQ--GRALVIGVNKWDGLDDHARDRAKADLTRKLKFLDFAKSHF-I 330
Query: 337 SAISGTGTGELL 348
SA TG G L+
Sbjct: 331 SAAKKTGIGALM 342
>gi|257784531|ref|YP_003179748.1| small GTP-binding protein [Atopobium parvulum DSM 20469]
gi|257473038|gb|ACV51157.1| small GTP-binding protein [Atopobium parvulum DSM 20469]
Length = 441
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 102/187 (54%), Gaps = 31/187 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS L NR+ AIV + GVTRDR Y + W EF L+DTGG+ +
Sbjct: 4 PIVAIVGRPNVGKSTLVNRIAEKRDAIVHESRGVTRDRSYHDADWNGREFKLIDTGGIES 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ KSQ R I QA A +E+ VI+F+VDG
Sbjct: 64 I-KSQD---------------------------RFAPHIREQALLACDEADVIVFVVDGT 95
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T DEE+A +RK+ K + L VNK ++P + +F++LG P+P+SA G
Sbjct: 96 TGVTDEDEEVARIVRKST--KPVFLVVNKKDNPATEQDGLWDFYALGCGEPMPLSASHGH 153
Query: 343 GTGELLD 349
GTG+LLD
Sbjct: 154 GTGDLLD 160
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 11/122 (9%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+AI+GRPNVGKS+L NRL R+IV D G TRD + W LVDT G+
Sbjct: 181 LAIIGRPNVGKSSLANRLANKKRSIVSDVAGTTRDAIDTMIEWKGTPIRLVDTAGI---- 236
Query: 226 KSQPNIMEDLAITTTI-GMEG-----IPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
+ + + ED+ + + G++ I L +A+V + ++ A A+E C ++ L
Sbjct: 237 RKKSQVHEDVEYYSLVRGLQAMDRADICLLVVDASVG-VTEQDQKLANMAVERGCALVLL 295
Query: 280 VD 281
++
Sbjct: 296 LN 297
>gi|444357828|ref|ZP_21159312.1| ribosome-associated GTPase EngA [Burkholderia cenocepacia BC7]
gi|443605518|gb|ELT73366.1| ribosome-associated GTPase EngA [Burkholderia cenocepacia BC7]
Length = 445
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 101/189 (53%), Gaps = 33/189 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+ P +A+VGRPNVGKS LFNRL A+V D PG+TRDR YG GE +++VDTGG
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPYLVVDTGGF 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
V+K I+ ++A RQ A+EE+ V++F+VD
Sbjct: 61 EPVAKD--GILHEMA---------------------------RQTRQAVEEADVVVFIVD 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ GL D+ IAD+LRK + I L VNK E K ++F+ LG P ISA
Sbjct: 92 GRNGLAPQDKSIADYLRKT--GRPIFLVVNKAEG-MKYTAVATDFYELGLGDPRAISAAH 148
Query: 341 GTGTGELLD 349
G G ++++
Sbjct: 149 GDGVTDMIN 157
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 85/192 (44%), Gaps = 38/192 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVGRPNVGKS L N L+G +R I D PG TRD +Y ++ L+DT G+
Sbjct: 181 KIAIVGRPNVGKSTLVNALIGEDRVIAFDMPGTTRDSIYVDFERNGKKYTLIDTAGLRRR 240
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K I E ++ T+ +I ++ V+I L+D Q
Sbjct: 241 GKVFEAI-EKFSVVKTL--------------------------QSISDANVVILLLDAQQ 273
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCES--------PRKGIMQVSEFWSLGFSPLPI 336
++ D IA ++ + + +++ VNK + + + + +F S I
Sbjct: 274 DISDQDAHIAGFVVEQ--GRALVIGVNKWDGLDDHARDHAKADLTRKLKFLDFAKSHF-I 330
Query: 337 SAISGTGTGELL 348
SA TG G L+
Sbjct: 331 SAAKKTGIGALM 342
>gi|416938396|ref|ZP_11934270.1| GTP-binding protein Der [Burkholderia sp. TJI49]
gi|325524779|gb|EGD02753.1| GTP-binding protein Der [Burkholderia sp. TJI49]
Length = 445
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 101/189 (53%), Gaps = 33/189 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+ P +A+VGRPNVGKS LFNRL A+V D PG+TRDR YG GE +++VDTGG
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPYLVVDTGGF 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
V+K I+ ++A RQ A+EE+ V++F+VD
Sbjct: 61 EPVAKD--GILHEMA---------------------------RQTRQAVEEADVVVFIVD 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ GL D+ IAD+LRK + I L VNK E K ++F+ LG P ISA
Sbjct: 92 GRNGLAPQDKTIADYLRKT--GRPIFLVVNKAEG-MKYTAVATDFYELGLGDPRAISAAH 148
Query: 341 GTGTGELLD 349
G G ++++
Sbjct: 149 GDGVTDMIN 157
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 85/192 (44%), Gaps = 38/192 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVGRPNVGKS L N L+G +R I D PG TRD +Y ++ L+DT G+
Sbjct: 181 KIAIVGRPNVGKSTLVNALIGEDRVIAFDMPGTTRDSIYVDFERNGKKYTLIDTAGLRRR 240
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K I E ++ T+ +I ++ V+I L+D Q
Sbjct: 241 GKVFEAI-EKFSVVKTL--------------------------QSISDANVVILLLDAQQ 273
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKC--------ESPRKGIMQVSEFWSLGFSPLPI 336
++ D IA ++ + + +++ VNK E + + + +F S I
Sbjct: 274 DISDQDAHIAGFVVEQ--GRALVIGVNKWDGLDEHARERAKADLTRKLKFLDFAKSHF-I 330
Query: 337 SAISGTGTGELL 348
SA TG G L+
Sbjct: 331 SAAKKTGIGALM 342
>gi|107029013|ref|YP_626108.1| GTP-binding protein EngA [Burkholderia cenocepacia AU 1054]
gi|116689829|ref|YP_835452.1| GTP-binding protein EngA [Burkholderia cenocepacia HI2424]
gi|170733168|ref|YP_001765115.1| GTP-binding protein EngA [Burkholderia cenocepacia MC0-3]
gi|123370031|sp|Q1BGX0.1|DER_BURCA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|166224312|sp|A0K7T2.1|DER_BURCH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|238688579|sp|B1JT88.1|DER_BURCC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|105898177|gb|ABF81135.1| Small GTP-binding protein domain protein [Burkholderia cenocepacia
AU 1054]
gi|116647918|gb|ABK08559.1| small GTP-binding protein [Burkholderia cenocepacia HI2424]
gi|169816410|gb|ACA90993.1| small GTP-binding protein [Burkholderia cenocepacia MC0-3]
Length = 445
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 101/189 (53%), Gaps = 33/189 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+ P +A+VGRPNVGKS LFNRL A+V D PG+TRDR YG GE +++VDTGG
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPYLVVDTGGF 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
V+K I+ ++A RQ A+EE+ V++F+VD
Sbjct: 61 EPVAKD--GILHEMA---------------------------RQTRQAVEEADVVVFIVD 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ GL D+ IAD+LRK + I L VNK E K ++F+ LG P ISA
Sbjct: 92 GRNGLAPQDKSIADYLRKT--GRPIFLVVNKAEG-MKYTAVATDFYELGLGDPRAISAAH 148
Query: 341 GTGTGELLD 349
G G ++++
Sbjct: 149 GDGVTDMIN 157
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 85/192 (44%), Gaps = 38/192 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVGRPNVGKS L N L+G +R I D PG TRD +Y ++ L+DT G+
Sbjct: 181 KIAIVGRPNVGKSTLVNALIGEDRVIAFDMPGTTRDSIYVDFERNGKKYTLIDTAGLRRR 240
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K I E ++ T+ +I ++ V+I L+D Q
Sbjct: 241 GKVFEAI-EKFSVVKTL--------------------------QSISDANVVILLLDAQQ 273
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCES--------PRKGIMQVSEFWSLGFSPLPI 336
++ D IA ++ + + +++ VNK + + + + +F S I
Sbjct: 274 DISDQDAHIAGFVVEQ--GRALVIGVNKWDGLDDHARDRAKADLTRKLKFLDFAKSHF-I 330
Query: 337 SAISGTGTGELL 348
SA TG G L+
Sbjct: 331 SAAKKTGIGALM 342
>gi|119944927|ref|YP_942607.1| GTP-binding protein EngA [Psychromonas ingrahamii 37]
gi|166225845|sp|A1SU43.1|DER_PSYIN RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|119863531|gb|ABM03008.1| small GTP-binding protein [Psychromonas ingrahamii 37]
Length = 489
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 107/190 (56%), Gaps = 34/190 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VA+VGRPNVGKS LFNRL A+V D PG+TRDR YG++ EHEF+++DTGG+
Sbjct: 1 MLPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKIDEHEFIVIDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
T EGI +++ Q+ AI+E+ ++FLVD
Sbjct: 61 ------------------TGDEEGI------------DALMAGQSLLAIDEADAVLFLVD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAIS 340
+AG+T ADE IAD LRK DK + + NK + + +EF++LG + I+A
Sbjct: 91 ARAGMTIADEAIADHLRKQ--DKKVFVVANKTDGVDADSV-CAEFYALGLGEVYHIAAAQ 147
Query: 341 GTGTGELLDL 350
G G +++++
Sbjct: 148 GKGVRQMIEI 157
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 90/194 (46%), Gaps = 36/194 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++A++GRPNVGKS L NR++G R +V D PG TRD +Y + E++L+DT GV
Sbjct: 202 KLALIGRPNVGKSTLTNRILGEERVLVYDLPGTTRDSIYIPMSRDDREYILIDTAGVRKR 261
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K + E ++ T+ AIE+ V++ ++D +
Sbjct: 262 KKVNETV-EKFSVIKTL--------------------------QAIEDCNVVLLIIDARD 294
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPR---KGIMQVSEFWSLGFSPLP----IS 337
G++ D + + + +++AVNK + K ++ LGF IS
Sbjct: 295 GISDQDLSLLGFTLN--AGRSLVIAVNKWDGMTEYDKERVKSELDRRLGFIDFAKIHFIS 352
Query: 338 AISGTGTGELLDLV 351
A+ GTG G L + V
Sbjct: 353 ALHGTGVGHLYESV 366
>gi|404451046|ref|ZP_11016020.1| ribosome-associated GTPase EngA [Indibacter alkaliphilus LW1]
gi|403763339|gb|EJZ24307.1| ribosome-associated GTPase EngA [Indibacter alkaliphilus LW1]
Length = 437
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 104/193 (53%), Gaps = 35/193 (18%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS FNRLV +AI + GVTRDR YG + WG F ++DTGG +
Sbjct: 5 VAIVGRPNVGKSTFFNRLVEERKAIEDNVSGVTRDRHYGHATWGGKFFSVIDTGGYV--- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+G E + A I +Q A+EE+ VI+F+VD G
Sbjct: 62 ---------------MGSEDVYEAE-----------IRKQVKLALEEANVILFVVDCHDG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP---LPISAISGT 342
LT D++ A+ LR + +K + + NK ++P K + +EF+++G PI+A SG+
Sbjct: 96 LTDMDKDFANVLRTS--EKPVFIVANKADTPEKS-LAAAEFYAMGIGENEVFPIAAASGS 152
Query: 343 GTGELLDLVCSEL 355
GTG+LLD V
Sbjct: 153 GTGDLLDEVIKHF 165
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 79/156 (50%), Gaps = 29/156 (18%)
Query: 159 PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDT 218
PE +P++AI+GRPNVGKS+ N L+G R+IV +E G TRD ++ R +F++ DT
Sbjct: 173 PEDGIPKIAILGRPNVGKSSFLNALLGKERSIVTNEAGTTRDAIHTRYKLYGQDFIITDT 232
Query: 219 GGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIF 278
G+ + + + ED+ + + ++ +EES V+I
Sbjct: 233 AGI----RKKAKVKEDIEFYSVM-----------------------RSLRTLEESDVLIV 265
Query: 279 LVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
+VD GL + D + KN +K I++ VNK +
Sbjct: 266 MVDASRGLESQDMNLISLGIKN--NKGIMIMVNKWD 299
>gi|433656890|ref|YP_007274269.1| GTP-binding protein EngA [Vibrio parahaemolyticus BB22OP]
gi|432507578|gb|AGB09095.1| GTP-binding protein EngA [Vibrio parahaemolyticus BB22OP]
Length = 498
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/213 (39%), Positives = 117/213 (54%), Gaps = 50/213 (23%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWG-EHEFMLVDTGG 220
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YG++ EHEF+++DTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQARLDEEHEFIVIDTGG 60
Query: 221 VLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLV 280
+ +G T E +M Q+ AAI+E+ V++FLV
Sbjct: 61 I----------------------DG----TEEGVETKMAE----QSLAAIDEADVVLFLV 90
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSPL-PI 336
DG+AGLT+ADE IA LRK ++K +L VNK + GI ++FW LG + I
Sbjct: 91 DGRAGLTSADEAIAAHLRK--IEKPAMLVVNKID----GIDADAACADFWQLGVDDMYQI 144
Query: 337 SAISGTGTGELL---------DLVCSELKKVEV 360
+A G G LL DL+ SE ++ E+
Sbjct: 145 AAAHGRGVTALLERALAPFFDDLLTSESEEGEI 177
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 40/220 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS L NR++G R +V D PG TRD +Y E++++DT GV
Sbjct: 211 KLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVIIDTAGVRRR 270
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + E ++ T+ A+E++ V++ ++D +
Sbjct: 271 GRINETV-EKFSVVKTL--------------------------KAVEDANVVLLVIDARE 303
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSEFWSLGFSPLP----IS 337
++ D + + + I+LAVNK ++ K ++ LGF IS
Sbjct: 304 NISDQDLSLLGFALN--AGRSIVLAVNKWDGLDNEVKENVKKELDRRLGFVDFARIHFIS 361
Query: 338 AISGTGTGELLDLVCSELKKVEVCIGFLLICNAITKIFHI 377
A+ GTG G L + + K +G + +T+I +
Sbjct: 362 ALHGTGVGHLFESIQEAYKSATTRVG----TSVLTRIMKM 397
>gi|399018047|ref|ZP_10720233.1| ribosome-associated GTPase EngA [Herbaspirillum sp. CF444]
gi|398102012|gb|EJL92204.1| ribosome-associated GTPase EngA [Herbaspirillum sp. CF444]
Length = 447
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 101/187 (54%), Gaps = 33/187 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +A+VGRPNVGKS LFNRL A+V D PG+TRDR YG GE F+++DTGG
Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPFLVIDTGGFEP 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
V+K IM ++A +Q A+ E+ V++F+VDG+
Sbjct: 63 VAKE--GIMYEMA---------------------------KQTKQAVVEADVVVFIVDGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT D+ I D+LRK+ + ++L VNK E K ++F+ LG P ISA G
Sbjct: 94 QGLTPHDKTITDFLRKS--GRSVMLVVNKAEG-MKYTSVTADFYELGLGDPYVISAAHGD 150
Query: 343 GTGELLD 349
G +L+D
Sbjct: 151 GVADLVD 157
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 89/196 (45%), Gaps = 36/196 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVGRPNVGKS L N L+G R I D PG TRD + ++ L+DT G+
Sbjct: 181 KIAIVGRPNVGKSTLVNTLLGEERVIAFDMPGTTRDSIEIPFERDGKQYTLIDTAGIRRR 240
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K I E ++ T+ +I E+ V++ L+D Q
Sbjct: 241 GKVFEAI-EKFSVVKTL--------------------------QSISETNVVLLLLDAQQ 273
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSEFWSLGFSPLP----IS 337
++ D IA ++ ++ + +++ VNK +S R+ +++ L F IS
Sbjct: 274 DISEQDAHIAGFVLES--GRALVVGVNKWDGLQSDRRDEIKMDLERKLSFLSFAKFHFIS 331
Query: 338 AISGTGTGELLDLVCS 353
A+ TG G L+ + S
Sbjct: 332 ALKSTGIGPLMKSIDS 347
>gi|206560243|ref|YP_002231007.1| GTP-binding protein EngA [Burkholderia cenocepacia J2315]
gi|238693091|sp|B4EAW5.1|DER_BURCJ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|198036284|emb|CAR52180.1| GTP-binding protein EngA [Burkholderia cenocepacia J2315]
Length = 445
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 101/189 (53%), Gaps = 33/189 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+ P +A+VGRPNVGKS LFNRL A+V D PG+TRDR YG GE +++VDTGG
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPYLVVDTGGF 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
V+K I+ ++A RQ A+EE+ V++F+VD
Sbjct: 61 EPVAKD--GILHEMA---------------------------RQTRQAVEEADVVVFIVD 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ GL D+ IAD+LRK + I L VNK E K ++F+ LG P ISA
Sbjct: 92 GRNGLAPQDKSIADYLRKT--GRPIFLVVNKAEG-MKYTAVATDFYELGLGDPRAISAAH 148
Query: 341 GTGTGELLD 349
G G ++++
Sbjct: 149 GDGVTDMIN 157
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 85/192 (44%), Gaps = 38/192 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVGRPNVGKS L N L+G +R I D PG TRD +Y ++ L+DT G+
Sbjct: 181 KIAIVGRPNVGKSTLVNALIGEDRVIAFDMPGTTRDSIYVDFERNGKKYTLIDTAGLRRR 240
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K I E ++ T+ +I ++ V+I L+D Q
Sbjct: 241 GKVFEAI-EKFSVVKTL--------------------------QSISDANVVILLLDAQQ 273
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCES--------PRKGIMQVSEFWSLGFSPLPI 336
++ D IA ++ + + +++ VNK + + + + +F S I
Sbjct: 274 DISDQDAHIAGFVVEQ--GRALVIGVNKWDGFDDHARDRAKADLTRKLKFLDFAKSHF-I 330
Query: 337 SAISGTGTGELL 348
SA TG G L+
Sbjct: 331 SAAKKTGIGALM 342
>gi|404497169|ref|YP_006721275.1| GTP-binding protein Der [Geobacter metallireducens GS-15]
gi|418066669|ref|ZP_12704029.1| ribosome-associated GTPase EngA [Geobacter metallireducens RCH3]
gi|123571482|sp|Q39T85.1|DER_GEOMG RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|78194772|gb|ABB32539.1| GTPase EngA [Geobacter metallireducens GS-15]
gi|373560162|gb|EHP86434.1| ribosome-associated GTPase EngA [Geobacter metallireducens RCH3]
Length = 439
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 80/197 (40%), Positives = 108/197 (54%), Gaps = 33/197 (16%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P VAIVGRPNVGKS LFNRLVG +AIV D PGVTRDR Y E F+L+DTGG
Sbjct: 1 MMPLVAIVGRPNVGKSTLFNRLVGRRKAIVDDMPGVTRDRNYETVTRFEAPFILIDTGGF 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
VS ED R+ + Q+ A+EE+ VIIFL+D
Sbjct: 61 EPVS-------ED----------------------RLLQQMREQSQLAMEEADVIIFLMD 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAIS 340
G+AGLT +D E+ + LR+ + K + VNK + K + ++F++LG L ISA
Sbjct: 92 GRAGLTPSDVEVVEMLRR--VKKPVFFVVNKVDG-EKIENEAADFYTLGIGTLHTISAEH 148
Query: 341 GTGTGELLDLVCSELKK 357
G +L++ V + L K
Sbjct: 149 NRGVNDLMEEVVAALPK 165
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 96/204 (47%), Gaps = 40/204 (19%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
+ R+A+VGRPNVGKS+L NRL+G R + PG TRD + + ++L+DT G+
Sbjct: 175 ITRIAVVGRPNVGKSSLVNRLLGFERVVANPTPGTTRDSVDTLFACNKKRYLLIDTAGIR 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K+ +E ++ ++ +IE + V++ +++
Sbjct: 235 RKGKTTQK-LEKYSVVDSL--------------------------RSIERADVVLIIINA 267
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKG-------IMQV-SEFWSLGFSPL 334
+ G+T DE IA + + K I VNK ++ K + Q+ +EF L F+P+
Sbjct: 268 EEGVTEQDERIAGYAFE--AGKACIFVVNKWDTLAKDNSTLGKFVDQIKTEFKYLSFAPI 325
Query: 335 PISAISGTGTGELLDLVCSELKKV 358
+G+ ++ V E+++V
Sbjct: 326 ---VFVSAKSGQRINRVMEEVERV 346
>gi|152981185|ref|YP_001353813.1| GTP-binding protein EngA [Janthinobacterium sp. Marseille]
gi|166198722|sp|A6SZW6.1|DER_JANMA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|151281262|gb|ABR89672.1| GTP-binding protein EngA [Janthinobacterium sp. Marseille]
Length = 447
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 101/187 (54%), Gaps = 33/187 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +A++GRPNVGKS LFNRL A+V D PG+TRDR YG GE F+++DTGG
Sbjct: 3 PVIALIGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPFLVIDTGGFEP 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
V+K IM ++A +Q A+ E+ V+IF+VDG+
Sbjct: 63 VAKE--GIMHEMA---------------------------KQTKQAVAEADVVIFIVDGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT D+ I D+LRK+ + ++L VNK E K ++F+ LG P ISA G
Sbjct: 94 QGLTPHDKTITDFLRKS--GRSVMLVVNKAEG-MKYTTVTADFYELGMGDPYVISAAHGD 150
Query: 343 GTGELLD 349
G +L++
Sbjct: 151 GVNDLVE 157
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 92/197 (46%), Gaps = 42/197 (21%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRM---YGRSFWGEHEFMLVDTGGV 221
++AIVGRPNVGKS L N L+G R I D PG TRD + + R G+H + L+DT G+
Sbjct: 182 KLAIVGRPNVGKSTLVNTLLGEERVIAFDLPGTTRDSIEIPFERD--GKH-YTLIDTAGI 238
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
K I E ++ T+ +I E+ V++ L+D
Sbjct: 239 RRRGKVFEAI-EKFSVVKTL--------------------------QSISEANVVLLLLD 271
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCE---SPRKGIMQVSEFWSLGFSPLP--- 335
Q ++ D IA ++ ++ + +++ VNK + S R+ +++ L F
Sbjct: 272 AQQDISEQDAHIAGFILES--GRALVVGVNKWDGLTSDRRDEIKMDLERKLSFLSFAKTH 329
Query: 336 -ISAISGTGTGELLDLV 351
+SA+ +G G ++ V
Sbjct: 330 FVSALKSSGIGPMMKSV 346
>gi|255037605|ref|YP_003088226.1| small GTP-binding protein [Dyadobacter fermentans DSM 18053]
gi|254950361|gb|ACT95061.1| small GTP-binding protein [Dyadobacter fermentans DSM 18053]
Length = 436
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 99/193 (51%), Gaps = 34/193 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
++IVGRPNVGKS LFNRL +AI+ ++ GVTRDR YG W + F ++DTGG +
Sbjct: 5 ISIVGRPNVGKSTLFNRLTESRKAIMDNQSGVTRDRHYGYGEWTDQYFTVIDTGGYV--- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+G E I I Q AIEES V++F+VD G
Sbjct: 62 ---------------VGSEDI-----------FEGAIRDQVELAIEESTVVLFMVDTMTG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP--LPISAISGTG 343
LT D++ A+ LR+ +K + L NK E+ + EF+ LG ISA +G G
Sbjct: 96 LTDLDKDFANVLRR--FNKPVYLVANKAETTER-YQSAGEFYELGLGDEIFAISAQTGFG 152
Query: 344 TGELLDLVCSELK 356
TGELLD V + +
Sbjct: 153 TGELLDKVVTHFE 165
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 74/156 (47%), Gaps = 29/156 (18%)
Query: 159 PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDT 218
PE +PR+AI+GRPNVGKS+ N L G +R+IV D G TRD ++ F+L DT
Sbjct: 172 PEEGIPRIAIMGRPNVGKSSFLNVLTGTDRSIVTDIAGTTRDAIHTHYNAFGMNFILTDT 231
Query: 219 GGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIF 278
G+ + + + ED+ +T+ ++ A+EES V I
Sbjct: 232 AGI----RRKSRVKEDIEFYSTL-----------------------RSVKAMEESDVCIV 264
Query: 279 LVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
L+D GL D I K K I++ VNK +
Sbjct: 265 LLDATLGLEGQDMNIIGQADK--AKKGIVIMVNKWD 298
>gi|259046866|ref|ZP_05737267.1| ribosome-associated GTPase EngA [Granulicatella adiacens ATCC
49175]
gi|259036489|gb|EEW37744.1| ribosome-associated GTPase EngA [Granulicatella adiacens ATCC
49175]
Length = 437
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 103/187 (55%), Gaps = 34/187 (18%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +A+VGRPNVGKS +FNR+VG +IV D GVTRDR+Y W H F ++DTGG+
Sbjct: 4 PVIAVVGRPNVGKSTIFNRIVGERISIVEDIAGVTRDRIYSEGEWLGHSFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+I ++ P S I QA A+EE+ VIIFL +
Sbjct: 62 ------DITDE------------PFM----------SNIRMQAEIAMEEADVIIFLTSVK 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T DE IA L + +K ++LAVNK ++P ++ +F++LGF P PIS G
Sbjct: 94 EGVTTTDEHIAKLLYRT--NKPVLLAVNKVDNPELR-SEIFDFYALGFGEPFPISGSHGL 150
Query: 343 GTGELLD 349
G G+LLD
Sbjct: 151 GLGDLLD 157
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 32/164 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHE--FMLVDTGGVL 222
+ + +GRPNVGKS+L N ++G R IV + G TRD + +F E F ++DT G+
Sbjct: 177 KFSFIGRPNVGKSSLVNAMLGEERVIVSNVAGTTRDAI-DTTFEDEEGTVFKMIDTAGI- 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + + E +T + +V R A AIE S ++ +++
Sbjct: 235 ---RKKGRVFE---------------STEKYSVLR--------ALRAIERSDIVCVVLNA 268
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
+ G+ D++IA + + K +++ VNK ++ K EF
Sbjct: 269 EEGIQEQDKKIAGYAHE--AGKGVVILVNKWDTLEKDNSTYKEF 310
>gi|294140150|ref|YP_003556128.1| GTP-binding protein EngA [Shewanella violacea DSS12]
gi|293326619|dbj|BAJ01350.1| GTP-binding protein EngA [Shewanella violacea DSS12]
Length = 490
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 104/196 (53%), Gaps = 40/196 (20%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YGR+ +EF++VDTGG+
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRASLSGYEFIVVDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
EGI + E Q+ AAIEE+ V++FL D
Sbjct: 61 DGTE------------------EGIEVHMAE------------QSLAAIEEADVVLFLTD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSPL-PIS 337
+AGLTAAD IAD LR+ DK + NK + GI +EFW+LG + ++
Sbjct: 91 ARAGLTAADHAIADHLRRR--DKTTFVVANKVD----GIDADSACAEFWALGLGEVYQMA 144
Query: 338 AISGTGTGELLDLVCS 353
A G G +++ +
Sbjct: 145 ASQGRGVTNMIEYALA 160
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 92/197 (46%), Gaps = 37/197 (18%)
Query: 163 LP-RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
LP ++AI+G+PNVGKS L NR++G R +V D PG TRD +Y E++L+DT GV
Sbjct: 198 LPIKLAIIGKPNVGKSTLINRILGEERVVVYDSPGTTRDSIYIPMEREGREYVLIDTAGV 257
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
SK + E ++ T+ AIE+ V++ ++D
Sbjct: 258 RRRSKVHETV-EKFSVIKTL--------------------------KAIEDCNVVLLIID 290
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQ--VSEF-WSLGFSPLP--- 335
+ G+ D + + + +++AVNK + + I SE LGF
Sbjct: 291 AREGIAEQDLGLLGFALN--AGRALVIAVNKWDGINQEIKDRVKSELDRRLGFIDFARIH 348
Query: 336 -ISAISGTGTGELLDLV 351
ISA+ GTG G L + V
Sbjct: 349 FISALHGTGVGHLYESV 365
>gi|253996245|ref|YP_003048309.1| GTP-binding protein EngA [Methylotenera mobilis JLW8]
gi|253982924|gb|ACT47782.1| small GTP-binding protein [Methylotenera mobilis JLW8]
Length = 484
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 108/199 (54%), Gaps = 33/199 (16%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P + +VGRPNVGKS LFNRL A+V D PG+TRDR YGR +++VDTGG
Sbjct: 1 MIPTIVLVGRPNVGKSTLFNRLTKTRDALVADLPGLTRDRHYGRGIGASQPYLVVDTGGF 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ S I++ +A +Q AI+E+ IIFLVD
Sbjct: 61 EPHTDS--GILKAMA---------------------------KQTLQAIDEADAIIFLVD 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G++ D EIA+ LR++ ++LAVNK E +K ++ ++F LG PL IS+
Sbjct: 92 GRQGVSPQDMEIANRLRRSKCP--VLLAVNKTEGMQKAVVS-ADFHELGLGYPLSISSAH 148
Query: 341 GTGTGELLDLVCSELKKVE 359
G G ++++L K+VE
Sbjct: 149 GEGVRDIVELALENFKEVE 167
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 76/155 (49%), Gaps = 33/155 (21%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
+P+VAIVGRPNVGKS L N L+G R I DEPG TRD ++ + L+DT GV
Sbjct: 179 IPKVAIVGRPNVGKSTLVNALLGEERVIAYDEPGTTRDSIHIDLEKNGKHYTLIDTAGVR 238
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ I E ++ TI AIEE+ V+I +VD
Sbjct: 239 KRGRVFEAI-EKFSVIKTI--------------------------QAIEEANVVILVVDA 271
Query: 283 QAGLTAADEEIADWLRKNYMD--KFIILAVNKCES 315
Q G+T D +A ++ +D + +++A+NK +
Sbjct: 272 QEGITEQDAHVAAYI----LDAGRALVVAINKWDG 302
>gi|385809957|ref|YP_005846353.1| GTPase [Ignavibacterium album JCM 16511]
gi|383802005|gb|AFH49085.1| Putative GTPase [Ignavibacterium album JCM 16511]
Length = 441
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 79/198 (39%), Positives = 108/198 (54%), Gaps = 33/198 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS LFNRL+G AIV D GVTRDR YG S W +F L+DTGG +
Sbjct: 3 LPLVAIVGRPNVGKSTLFNRLLGKRDAIVDDVSGVTRDRNYGESDWSGKKFRLIDTGGYV 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
S DL S I Q AI+E+ IIFL+D
Sbjct: 63 PES-------SDL----------------------FESAIREQVETAIDEADSIIFLLDF 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISG 341
+AGL D+ IA+ LR++ F++ +NK ++ + +SEF+ +G + ISA+SG
Sbjct: 94 KAGLNPIDKIIANMLRQSGKKYFVV--INKVDNEIQK-QALSEFYEIGVDKIYNISALSG 150
Query: 342 TGTGELLDLVCSELKKVE 359
G+LLD + S+ +++
Sbjct: 151 RQLGDLLDDITSDFPEID 168
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 102/206 (49%), Gaps = 43/206 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYG-RSFWGEHEFMLVDTGGVLN 223
++AIVGRPNVGKS+L N L+G R+IV D PG TRD + ++GE E +L+DT G+
Sbjct: 177 KIAIVGRPNVGKSSLANALLGQERSIVTDIPGTTRDSIDSILKYYGE-EIILIDTAGLRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
SK Q E + + I + AI E V I ++D +
Sbjct: 236 KSKVQ----ESIEFFSNI-----------------------RTYKAIGECDVAIVMIDAK 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQV-----SEFWSLGFSPLP 335
G + D++I D + + K +I+AVNK E + +Q ++ + F+P+
Sbjct: 269 LGFESQDQKIIDEVIR--WRKGLIIAVNKWDLIEKDQNTALQFERAIRNKLGTADFAPII 326
Query: 336 -ISAISGTGTGELLDL---VCSELKK 357
ISA++ +L++L V SE KK
Sbjct: 327 FISALTKQRIFKLIELSKQVESERKK 352
>gi|237745515|ref|ZP_04575995.1| GTP-binding protein engA [Oxalobacter formigenes HOxBLS]
gi|229376866|gb|EEO26957.1| GTP-binding protein engA [Oxalobacter formigenes HOxBLS]
Length = 445
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 101/187 (54%), Gaps = 33/187 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +A+VGRPNVGKS LFNRL A+V D PG+TRDR YG G+ F+++DTGG
Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRAALVADYPGLTRDRHYGEGRMGDRPFLVIDTGGFEP 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
V K +++++A +Q A+ ES V++F+VDG+
Sbjct: 63 VVKE--GVLQEMA---------------------------KQTKQAVAESDVVVFMVDGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+T D+ I D+LRK + +IL VNK E K V++F+ LG PL IS+ G
Sbjct: 94 QGITPHDKAITDYLRK--CGRPVILVVNKAEG-MKYTAVVADFYELGLGDPLVISSAHGD 150
Query: 343 GTGELLD 349
G LL+
Sbjct: 151 GVHTLLE 157
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 90/194 (46%), Gaps = 42/194 (21%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRM---YGRSFWGEHEFMLVDTGGV 221
R+A+VGRPNVGKS + N L+G R I D PG TRD + + R G+H + LVDT G+
Sbjct: 182 RLAVVGRPNVGKSTMINALLGEERVIAFDLPGTTRDAIEIPFERD--GKH-YTLVDTAGL 238
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
K I E ++ T+ AI E+ V++ L+D
Sbjct: 239 RKRGKVFQAI-EKFSVVKTL--------------------------QAISEANVVLLLLD 271
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCES----PRKGIMQVSE--FWSLGFSPLP 335
Q ++ D IA ++ ++ + +++ +NK + R+ + E L F+
Sbjct: 272 AQQDISEQDAHIAGFVLES--GRALVVGINKWDGLPPDKRREVKAEVERKLHFLSFAKFH 329
Query: 336 -ISAISGTGTGELL 348
+SA+ TG G L+
Sbjct: 330 YVSALKATGIGALM 343
>gi|373455601|ref|ZP_09547430.1| ribosome-associated GTPase EngA [Dialister succinatiphilus YIT
11850]
gi|371934694|gb|EHO62474.1| ribosome-associated GTPase EngA [Dialister succinatiphilus YIT
11850]
Length = 442
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 80/191 (41%), Positives = 104/191 (54%), Gaps = 34/191 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV-L 222
P VAIVGRPNVGKS L N L +IV D PGVTRDR+Y W + EF L+DTGG+
Sbjct: 4 PLVAIVGRPNVGKSTLINGLAQRRVSIVEDIPGVTRDRIYCDVKWLDKEFTLIDTGGIEF 63
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
K Q + S I +QA A+EE+ VI+F+VD
Sbjct: 64 RNEKDQ-----------------------------ISSGIRQQAELAMEEADVILFVVDA 94
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T+ DE IA LRK K ++LAVNK +S + M V EF+SLG P+ ISA++
Sbjct: 95 RTGMTSDDEIIAGLLRKT--GKPVVLAVNKVDSDNQE-MDVYEFYSLGLGDPIGISAVNR 151
Query: 342 TGTGELLDLVC 352
G+LLD +
Sbjct: 152 LNFGDLLDRIT 162
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 79/162 (48%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R AIVGRPNVGKS L N L+G R++V DE G TRD + + F+LVDT G+
Sbjct: 178 RTAIVGRPNVGKSTLINSLLGYERSLVADEMGTTRDAVDSLWTYKGKTFILVDTAGMRKK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK I E L + I ++ AI+ V IF++D +
Sbjct: 238 SK----IDEPLEKYSVI-----------------------RSIRAIDNCDVAIFVIDAED 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
LT D++I ++ + K +IL VNK +S K ++EF
Sbjct: 271 KLTEQDKKIIGYIHE--AGKGLILFVNKWDSIAKDEHTINEF 310
>gi|393778490|ref|ZP_10366763.1| EngA protein [Ralstonia sp. PBA]
gi|392714528|gb|EIZ02129.1| EngA protein [Ralstonia sp. PBA]
Length = 447
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 100/187 (53%), Gaps = 33/187 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +A+VGRPNVGKS LFNRL A+V D PG+TRDR YG GE F+++DTGG
Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRIGERPFIVIDTGGFEP 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
V+K IM ++A +Q A+ E+ ++F+VDG+
Sbjct: 63 VAKD--GIMAEMA---------------------------KQTRQAVVEADTVVFIVDGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL D IAD+LRK + ++L VNK E + + ++F+ LG PL ISA G
Sbjct: 94 LGLAPQDRVIADYLRKT--GRQVMLVVNKAEGMKYSSV-TADFYELGLGDPLVISAAHGD 150
Query: 343 GTGELLD 349
G EL+D
Sbjct: 151 GVAELVD 157
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 48/197 (24%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVGRPNVGKS L N L+G +R I D PG TRD +Y G + L+DT G+
Sbjct: 182 KIAIVGRPNVGKSTLVNALIGEDRVIAFDMPGTTRDAIYVPFERGGKPYTLIDTAGLRKR 241
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K I E ++ T+ +I ++ V++ L+D +
Sbjct: 242 GKVFEAI-EKFSVVKTL--------------------------QSIADANVVVLLLDARQ 274
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVN-------------KCESPRKGIMQVSEFWSLGF 331
++ D IA ++ ++ + +++ VN K + RK ++ F + F
Sbjct: 275 DVSEQDAHIAGFIVES--GRALVVGVNKWDGLDGHTRDRIKADMERK--LKFLSFANFHF 330
Query: 332 SPLPISAISGTGTGELL 348
ISA+ TG G L+
Sbjct: 331 ----ISAVERTGIGPLM 343
>gi|299067270|emb|CBJ38467.1| GTPase involved in ribosome synthesis and maintenance [Ralstonia
solanacearum CMR15]
Length = 447
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 101/189 (53%), Gaps = 33/189 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+ P +A+VGRPNVGKS LFNRL A+V D PG+TRDR YG GE F+ +DTGG
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPFIAIDTGGF 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
V+K EGI VA M +Q A+ E+ V+IF+VD
Sbjct: 61 EPVAK-----------------EGI--------VAEMA----KQTRQAVVEADVVIFIVD 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ GL D IAD+LRK + I+LAVNK E K ++F+ LG P IS+
Sbjct: 92 GRLGLAPQDRVIADYLRKT--GRRILLAVNKAEG-MKYTAVATDFYELGLGDPRAISSAH 148
Query: 341 GTGTGELLD 349
G G EL+D
Sbjct: 149 GDGVRELVD 157
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 70/151 (46%), Gaps = 29/151 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R+AIVGRPNVGKS L N L+G R I D PG TRD +Y + L+DT G+
Sbjct: 182 RIAIVGRPNVGKSTLVNALIGEERVIAFDMPGTTRDAIYVDFERNGKPYTLIDTAGLRKR 241
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K I E ++ T+ +I ++ V++ L+D Q
Sbjct: 242 GKVFEAI-EKFSVVKTL--------------------------QSIADANVVVLLLDAQQ 274
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCES 315
++ D IA ++ ++ + +++ VNK +
Sbjct: 275 DISDQDAHIAGFIVES--GRALVIGVNKWDG 303
>gi|187924514|ref|YP_001896156.1| GTP-binding protein EngA [Burkholderia phytofirmans PsJN]
gi|238689579|sp|B2SXS6.1|DER_BURPP RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|187715708|gb|ACD16932.1| small GTP-binding protein [Burkholderia phytofirmans PsJN]
Length = 445
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 103/189 (54%), Gaps = 33/189 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+ P +A+VGRPNVGKS LFNRL A+V D PG+TRDR YG G+ +++VDTGG
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRTRDALVADLPGLTRDRHYGEGRAGDRPYLVVDTGGF 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
V+K I+ ++A RQ A+EES +++F+VD
Sbjct: 61 EPVAKD--GILHEMA---------------------------RQTRQAVEESDIVVFIVD 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ GL D+ IAD+LRK + + I L VNK E + + ++F+ LG P ISA
Sbjct: 92 GRNGLAPQDKSIADYLRK--VGRPIFLVVNKAEGMKYSNV-AADFYELGLGDPRAISAAH 148
Query: 341 GTGTGELLD 349
G G E+++
Sbjct: 149 GDGVTEMIN 157
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 70/151 (46%), Gaps = 29/151 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVGRPNVGKS L N LVG R I D PG TRD +Y G + L+DT G+
Sbjct: 181 KIAIVGRPNVGKSTLINALVGEERVIAFDMPGTTRDSIYVDFERGGKPYTLIDTAGLRRR 240
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K I E ++ T+ +I ++ V+I L+D +
Sbjct: 241 GKVFEAI-EKFSVVKTL--------------------------QSISDANVVILLLDARQ 273
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCES 315
++ D IA ++ + + +++ VNK +
Sbjct: 274 DISEQDAHIAGFVVEQ--GRALVVGVNKWDG 302
>gi|194290002|ref|YP_002005909.1| gtp-binding protein enga [Cupriavidus taiwanensis LMG 19424]
gi|238692737|sp|B3R1J8.1|DER_CUPTR RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|193223837|emb|CAQ69846.1| Ribosome-Associated GTP-binding protein protein [Cupriavidus
taiwanensis LMG 19424]
Length = 447
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 100/189 (52%), Gaps = 33/189 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+ P +A+VGRPNVGKS LFNR+ A+V D PG+TRDR YG GE F+ +DTGG
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRMTRSRDALVADLPGLTRDRHYGEGRIGERPFIAIDTGGF 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
V K EGI VA M +Q A+ E+ V+IF+VD
Sbjct: 61 EPVVK-----------------EGI--------VAEMA----KQTKQAVVEADVVIFIVD 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ GL D IAD+LRK + I+LAVNK E K ++F+ LG P ISA
Sbjct: 92 GRLGLAPQDRAIADYLRKT--GRRIMLAVNKAEG-MKYTSVAADFYELGMGDPYAISAAH 148
Query: 341 GTGTGELLD 349
G G EL+D
Sbjct: 149 GDGVRELVD 157
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 71/151 (47%), Gaps = 29/151 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVGRPNVGKS L N L+G R I D PG TRD +Y G + L+DT G+
Sbjct: 182 KIAIVGRPNVGKSTLVNTLIGEERVIAFDMPGTTRDAIYVEFERGGKPYTLIDTAGLRRR 241
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K I E ++ T+ +I ++ V+I L+D Q
Sbjct: 242 GKVFEAI-EKFSVVKTL--------------------------QSIADANVVILLLDAQQ 274
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCES 315
++ D IA ++ ++ + +++ VNK +
Sbjct: 275 DISDQDAHIAGFIVES--GRALVVGVNKWDG 303
>gi|417320643|ref|ZP_12107186.1| GTP-binding protein Der [Vibrio parahaemolyticus 10329]
gi|328472592|gb|EGF43455.1| GTP-binding protein Der [Vibrio parahaemolyticus 10329]
Length = 498
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 115/213 (53%), Gaps = 50/213 (23%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWG-EHEFMLVDTGG 220
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YG++ EHEF+++DTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQARLDEEHEFIVIDTGG 60
Query: 221 VLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLV 280
+ T E +M Q+ AAI+E+ V++FLV
Sbjct: 61 I--------------------------DGTEEGVETKMAE----QSLAAIDEADVVLFLV 90
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSPL-PI 336
DG+AGLT+ADE IA LRK ++K +L VNK + GI ++FW LG + I
Sbjct: 91 DGRAGLTSADEAIAAHLRK--IEKPAMLVVNKID----GIDADAACADFWQLGVDDMYQI 144
Query: 337 SAISGTGTGELL---------DLVCSELKKVEV 360
+A G G LL DL+ SE ++ E+
Sbjct: 145 AAAHGRGVTALLERALAPFFDDLLTSESEEGEI 177
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 40/220 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS L NR++G R +V D PG TRD +Y E++++DT GV
Sbjct: 211 KLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVIIDTAGVRRR 270
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + E ++ T+ A+E++ V++ ++D +
Sbjct: 271 GRINETV-EKFSVVKTL--------------------------KAVEDANVVLLVIDARE 303
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQVSEFWSLGFSPLP----IS 337
++ D + + + I+LAVNK ++ K ++ LGF IS
Sbjct: 304 NISDQDLSLLGFALN--AGRSIVLAVNKWDGLDNEVKENVKKELDRRLGFVDFARIHFIS 361
Query: 338 AISGTGTGELLDLVCSELKKVEVCIGFLLICNAITKIFHI 377
A+ GTG G L + + K +G + +T+I +
Sbjct: 362 ALHGTGVGHLFESIQEAYKSATTRVG----TSVLTRIMKM 397
>gi|406936113|gb|EKD69916.1| hypothetical protein ACD_46C00700G0003 [uncultured bacterium]
Length = 438
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 105/200 (52%), Gaps = 34/200 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP +AIVGRPNVGKS LFNRL A++ D PG TRDR YG E F+++DTGG+
Sbjct: 1 MLPVLAIVGRPNVGKSTLFNRLTRSRDALISDFPGTTRDRQYGEVNLHERHFIIIDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
T E + + +I +QA AIE++ I+FLVD
Sbjct: 61 ----------------------------TEE--IDDVGKLITQQALQAIEDADKILFLVD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAIS 340
QAG+T D+ IAD LRK K LAVNK + I ++ + LG +PLPISA
Sbjct: 91 AQAGITPEDKMIADSLRK--AGKPFFLAVNKTDGTDPNI-STADAYELGLGTPLPISAAH 147
Query: 341 GTGTGELLDLVCSELKKVEV 360
GTG L+ + E ++ +
Sbjct: 148 GTGVMTLVQTLFPEPTEISI 167
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 93/195 (47%), Gaps = 38/195 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVGRPNVGKS L NR++G R IV D PG TRD ++ E + L+DT GV
Sbjct: 176 KLAIVGRPNVGKSTLTNRMLGEERVIVHDSPGTTRDSIFIPLERYEKHYTLIDTAGVRK- 234
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K ++ E ++ T+ AIE + V+++++D +
Sbjct: 235 RKKVADVPEKFSVVKTL--------------------------QAIESAHVVLYIIDARI 268
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKC--------ESPRKGIMQVSEFWSLGFSPLPI 336
G++ D ++ ++ + K +++A+NK E + I + +F S I
Sbjct: 269 GVSEQDLKLLGFILE--CGKALVIAINKWDGMTEEAREHAKATIDRQLDFVSFAKIHF-I 325
Query: 337 SAISGTGTGELLDLV 351
SA+ G+G G L + V
Sbjct: 326 SALHGSGVGNLFESV 340
>gi|115351797|ref|YP_773636.1| GTP-binding protein EngA [Burkholderia ambifaria AMMD]
gi|170702835|ref|ZP_02893684.1| small GTP-binding protein [Burkholderia ambifaria IOP40-10]
gi|171321331|ref|ZP_02910290.1| small GTP-binding protein [Burkholderia ambifaria MEX-5]
gi|122323095|sp|Q0BEX1.1|DER_BURCM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|115281785|gb|ABI87302.1| small GTP-binding protein [Burkholderia ambifaria AMMD]
gi|170132253|gb|EDT00732.1| small GTP-binding protein [Burkholderia ambifaria IOP40-10]
gi|171093388|gb|EDT38576.1| small GTP-binding protein [Burkholderia ambifaria MEX-5]
Length = 445
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 100/189 (52%), Gaps = 33/189 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+ P +A+VGRPNVGKS LFNRL A+V D PG+TRDR YG GE +++VDTGG
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPYLVVDTGGF 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
V+K I+ +A RQ A+EE+ V++F+VD
Sbjct: 61 EPVAKD--GILHQMA---------------------------RQTRQAVEEADVVVFIVD 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ GL D+ IAD+LRK + I L VNK E K ++F+ LG P ISA
Sbjct: 92 GRNGLAPQDKSIADYLRKT--GRPIFLVVNKAEG-MKYTAVATDFYELGLGDPRAISAAH 148
Query: 341 GTGTGELLD 349
G G ++++
Sbjct: 149 GDGVTDMIN 157
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 85/192 (44%), Gaps = 38/192 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVGRPNVGKS L N L+G +R I D PG TRD +Y ++ L+DT G+
Sbjct: 181 KIAIVGRPNVGKSTLVNALIGEDRVIAFDMPGTTRDSIYVDFERNGKKYTLIDTAGLRRR 240
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K I E ++ T+ +I ++ V+I L+D Q
Sbjct: 241 GKVFEAI-EKFSVVKTL--------------------------QSISDANVVILLLDAQQ 273
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCES--------PRKGIMQVSEFWSLGFSPLPI 336
++ D IA ++ + + +++ VNK + + + + +F S I
Sbjct: 274 DISDQDAHIAGFVVEQ--GRALVIGVNKWDGLDDHARDRAKADLTRKLKFLDFAKSHY-I 330
Query: 337 SAISGTGTGELL 348
SA TG G L+
Sbjct: 331 SAAKKTGIGALM 342
>gi|412338299|ref|YP_006967054.1| GTP-binding protein [Bordetella bronchiseptica 253]
gi|408768133|emb|CCJ52892.1| putative GTP-binding protein [Bordetella bronchiseptica 253]
Length = 451
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 103/193 (53%), Gaps = 32/193 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFNRL A+V D G+TRDR YG G+ F+++DTGG
Sbjct: 5 PVVALVGRPNVGKSTLFNRLTRSRAALVADFSGLTRDRHYGEGRVGDTPFLVIDTGGFEP 64
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
V+K I+ ++A RQ AI E+ V++FLVD +
Sbjct: 65 VAKD--GILAEMA---------------------------RQTRQAIAEADVVVFLVDAR 95
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
AG+ A D EIA LRK+ + ++LAVNK E G S+F LG P PISA G
Sbjct: 96 AGVNAHDHEIARLLRKSGQQR-VLLAVNKAEGMGVG-NATSDFHELGLGEPHPISAAHGD 153
Query: 343 GTGELLDLVCSEL 355
G +L+++ S L
Sbjct: 154 GIVDLIEVALSGL 166
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 90/196 (45%), Gaps = 40/196 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVGRPNVGKS L N L+G R I D PG TRD + ++ L+DT G+
Sbjct: 187 KLAIVGRPNVGKSTLINTLLGEERVIAFDMPGTTRDAIEIDFERDGRKYTLIDTAGLRKR 246
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K I E ++ T+ AIE S V++ ++D QA
Sbjct: 247 GKVFEAI-EKFSVIKTL--------------------------QAIEASNVVLLMIDAQA 279
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCES----PRKGIMQVSEFWS----LGFSPL-P 335
++ D IA ++ + + +++A+NK + R+ I + EF L F+ +
Sbjct: 280 EVSEQDAHIAGFVLET--GRAVVVAINKWDGLDSDQRERIER--EFQRKLRFLSFARMHT 335
Query: 336 ISAISGTGTGELLDLV 351
ISA+ G G LL V
Sbjct: 336 ISALKGQGVKPLLKSV 351
>gi|126663301|ref|ZP_01734299.1| GTP-binding protein EngA [Flavobacteria bacterium BAL38]
gi|126624959|gb|EAZ95649.1| GTP-binding protein EngA [Flavobacteria bacterium BAL38]
Length = 436
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 104/191 (54%), Gaps = 33/191 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS FNRL+ AIV GVTRDR YG+S W EF ++DTGG +
Sbjct: 5 VAIVGRPNVGKSTFFNRLIQRREAIVDSVSGVTRDRNYGKSEWNGKEFSVIDTGGYI--- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
K +I E + I +Q AI+E+ IIF+VD + G
Sbjct: 62 KGSDDIFE--------------------------AEIRKQVELAIDEADAIIFVVDVEEG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP-LPISAISGTGT 344
+T D+E+A LRK + K ++L +NK ++ + V EF++LG IS +SG+GT
Sbjct: 96 ITPMDDEVAKLLRK--VKKPVLLVINKVDNAMREKDAV-EFYNLGLGEYFTISGMSGSGT 152
Query: 345 GELLDLVCSEL 355
GELLD + L
Sbjct: 153 GELLDKLVEVL 163
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 82/192 (42%), Gaps = 35/192 (18%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LPR +VGRPN GKS+ N L+G +R +V D G TRD + R EF LVDT G+
Sbjct: 176 LPRFCVVGRPNAGKSSFINALIGEDRFVVTDIAGTTRDAIDTRYNRFGFEFNLVDTAGI- 234
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ + + EDL + + ++ AIE S V + ++D
Sbjct: 235 ---RRKAKVKEDLEFYSVM-----------------------RSVRAIEHSDVCLLVIDA 268
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS------LGFSPLPI 336
G D+ I KN K +++ VNK + K M ++ F+ +PI
Sbjct: 269 TRGFEGQDQSIFWLAEKN--RKGVVILVNKWDLVEKDTMTTRDYERKIREELQPFTDVPI 326
Query: 337 SAISGTGTGELL 348
IS LL
Sbjct: 327 LFISALTKQRLL 338
>gi|375264590|ref|YP_005022033.1| GTP-binding protein Der [Vibrio sp. EJY3]
gi|369839914|gb|AEX21058.1| GTP-binding protein Der [Vibrio sp. EJY3]
Length = 498
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 109/193 (56%), Gaps = 41/193 (21%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWG-EHEFMLVDTGG 220
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YG++ G EHEF+++DTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEEHEFIVIDTGG 60
Query: 221 VLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLV 280
+ +G T E +M Q+ AAI+E+ V++FLV
Sbjct: 61 I----------------------DG----TEEGVETKMAE----QSLAAIDEADVVLFLV 90
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSPL-PI 336
DG+AGLT +DE IA LRK ++K +L VNK + GI ++FW LG + I
Sbjct: 91 DGRAGLTPSDEAIAAHLRK--IEKPAMLVVNKID----GIDADAACADFWQLGVDDMYQI 144
Query: 337 SAISGTGTGELLD 349
+A G G LL+
Sbjct: 145 AAAHGRGVTALLE 157
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 92/206 (44%), Gaps = 36/206 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS L NR++G R +V D PG TRD +Y E++L+DT GV
Sbjct: 211 KLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRRR 270
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + E ++ T+ A+E++ V++ ++D +
Sbjct: 271 GRINETV-EKFSVVKTL--------------------------KAVEDANVVLLVIDARE 303
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF---WSLGFSPLP----IS 337
++ D + + + I+LAVNK + + + + LGF IS
Sbjct: 304 NISDQDLSLLGFALN--AGRSIVLAVNKWDGLDNDVKENVKKELDRRLGFVDFARIHFIS 361
Query: 338 AISGTGTGELLDLVCSELKKVEVCIG 363
A+ GTG G L + + K +G
Sbjct: 362 ALHGTGVGHLFESIQEAYKSATTRVG 387
>gi|157374575|ref|YP_001473175.1| GTP-binding protein EngA [Shewanella sediminis HAW-EB3]
gi|189037163|sp|A8FT74.1|DER_SHESH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|157316949|gb|ABV36047.1| small GTP-binding protein [Shewanella sediminis HAW-EB3]
Length = 488
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 104/196 (53%), Gaps = 40/196 (20%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YGR+F +EF++VDTGG+
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAFLSGYEFIVVDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
EGI E Q+ AAIEE+ V++FL D
Sbjct: 61 DGTE------------------EGIETHMAE------------QSLAAIEEADVVLFLTD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSPL-PIS 337
+AGLTAAD+ I + LR+ F++ NK + GI +EFW+LG + ++
Sbjct: 91 ARAGLTAADQAICEHLRRREKTTFVV--ANKVD----GIDADSACAEFWALGLGEVYQMA 144
Query: 338 AISGTGTGELLDLVCS 353
A G G +++ +
Sbjct: 145 AAQGRGVTNMIEYALA 160
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 92/197 (46%), Gaps = 37/197 (18%)
Query: 163 LP-RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
LP ++AI+G+PNVGKS L NR++G R +V D PG TRD +Y E++++DT GV
Sbjct: 198 LPIKMAIIGKPNVGKSTLTNRILGEERVVVYDSPGTTRDSIYIPMERDGREYVMIDTAGV 257
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
SK + E ++ T+ A+E+ V++ ++D
Sbjct: 258 RRRSKVHETV-EKFSVIKTL--------------------------KAVEDCNVVLLIID 290
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQ--VSEF-WSLGFSPLP--- 335
+ G+ D + + + +++AVNK + + I SE LGF
Sbjct: 291 AREGIAEQDLGLLGFALN--AGRALVIAVNKWDGIDQDIKDRVKSELDRRLGFIDFARIH 348
Query: 336 -ISAISGTGTGELLDLV 351
ISA+ GTG G L + V
Sbjct: 349 FISALHGTGVGHLFESV 365
>gi|294102070|ref|YP_003553928.1| ribosome-associated GTPase EngA [Aminobacterium colombiense DSM
12261]
gi|293617050|gb|ADE57204.1| ribosome-associated GTPase EngA [Aminobacterium colombiense DSM
12261]
Length = 436
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 80/196 (40%), Positives = 110/196 (56%), Gaps = 37/196 (18%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
+P +AIVGRPNVGKS+LFNR++G AIV D PGVTRDR+YG + W +F +VDTGG+L
Sbjct: 1 MPIIAIVGRPNVGKSSLFNRILGRREAIVDDMPGVTRDRIYGETEWKGRQFYIVDTGGLL 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
V P + EG I +QAT AIEES VI+F++DG
Sbjct: 61 -VRDEHPLV------------EG----------------IRKQATLAIEESHVILFVIDG 91
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQ--VSEFWSLGFSP-LPISAI 339
G DE++A LR++ K +I+ NK + GI + V + +SLGF + ISA+
Sbjct: 92 FNGPNWMDEDVAHILRRS--GKPVIVVANKLDD---GIHEDRVYDAYSLGFEHVVGISAL 146
Query: 340 SGTGTGELLDLVCSEL 355
+L+D+ S L
Sbjct: 147 HKRYIDDLMDMAVSLL 162
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 76/149 (51%), Gaps = 8/149 (5%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
RV+IVGRPNVGKS+L N L G +R +V D PG TRD E +F +DT G+
Sbjct: 176 RVSIVGRPNVGKSSLVNALAGSDRVLVSDIPGTTRDATDTVIEMKEGKFRFIDTAGLRKK 235
Query: 225 SKSQPNIMEDLAITT--TIGMEGIPLATREAAVARMPSMIERQATAA--IEESCVIIFLV 280
S+ +I + T + + L +A+ P+ + + AA IE+ +I L+
Sbjct: 236 SRIDSDIEYYSFVRTLQAVDRSDVALLVMDAS---EPTTDQDKKMAAQVIEKGKGLILLI 292
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILA 309
+ L AAD ++ D +RK D+ L+
Sbjct: 293 NKWDTLEAAD-KLGDEMRKRVRDEMPFLS 320
>gi|254179556|ref|ZP_04886155.1| GTP-binding protein EngA [Burkholderia pseudomallei 1655]
gi|184210096|gb|EDU07139.1| GTP-binding protein EngA [Burkholderia pseudomallei 1655]
Length = 445
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 100/189 (52%), Gaps = 33/189 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+ P +A+VGRPNVGKS LFNRL A+V D PG+TRDR YG G +++VDTGG
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGARPYLVVDTGGF 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
V+K I+ ++A RQ A+EE+ V++F+VD
Sbjct: 61 EPVAKD--GILHEMA---------------------------RQTRQAVEEADVVVFIVD 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ GL D+ IAD+LRK + I L VNK E K S+F+ LG P ISA
Sbjct: 92 GRNGLAPQDKSIADYLRKT--GRPIFLVVNKAEG-MKYTAVASDFYELGLGDPRAISATH 148
Query: 341 GTGTGELLD 349
G G ++++
Sbjct: 149 GDGVNDMIN 157
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 91/211 (43%), Gaps = 52/211 (24%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVGRPNVGKS L N L+G +R I D PG TRD +Y + L+DT G+
Sbjct: 181 KIAIVGRPNVGKSTLVNTLIGEDRVIAFDMPGTTRDSIYVDFERNGKHYTLIDTAGLRRR 240
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K I E ++ T+ +I ++ V+I L+D +
Sbjct: 241 GKVFEAI-EKFSVVKTL--------------------------QSISDANVVILLLDARQ 273
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCES-------------PRKGIMQVSEFWSLGF 331
++ D IA ++ + + +++ VNK + RK ++ EF F
Sbjct: 274 DISDQDAHIAGFVVEQ--GRALVVGVNKWDGLDPHVRERTKADLARK--LKFLEFAKFHF 329
Query: 332 SPLPISAISGTGTGELL----DLVCSELKKV 358
ISA TG G L+ D + +KK+
Sbjct: 330 ----ISAAEKTGIGALMRSVDDAYAAAMKKL 356
>gi|172060768|ref|YP_001808420.1| GTP-binding protein EngA [Burkholderia ambifaria MC40-6]
gi|238689149|sp|B1YR40.1|DER_BURA4 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|171993285|gb|ACB64204.1| small GTP-binding protein [Burkholderia ambifaria MC40-6]
Length = 445
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 100/189 (52%), Gaps = 33/189 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+ P +A+VGRPNVGKS LFNRL A+V D PG+TRDR YG GE +++VDTGG
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPYLVVDTGGF 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
V+K I+ +A RQ A+EE+ V++F+VD
Sbjct: 61 EPVAKD--GILHQMA---------------------------RQTRQAVEEADVVVFIVD 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ GL D+ IAD+LRK + I L VNK E K ++F+ LG P ISA
Sbjct: 92 GRNGLAPQDKSIADYLRKT--GRPIFLVVNKAEG-MKYTAVATDFYELGLGDPRAISAAH 148
Query: 341 GTGTGELLD 349
G G ++++
Sbjct: 149 GDGVTDMIN 157
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 85/192 (44%), Gaps = 38/192 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVGRPNVGKS L N L+G +R I D PG TRD +Y ++ L+DT G+
Sbjct: 181 KIAIVGRPNVGKSTLVNALIGEDRVIAFDMPGTTRDSIYVDFERNGKKYTLIDTAGLRRR 240
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K I E ++ T+ +I ++ V+I L+D Q
Sbjct: 241 GKVFEAI-EKFSVVKTL--------------------------QSISDANVVILLLDAQQ 273
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCES--------PRKGIMQVSEFWSLGFSPLPI 336
++ D IA ++ + + +++ VNK + + + + +F S I
Sbjct: 274 DISDQDAHIAGFVVEQ--GRALVIGVNKWDGLDDHARDRAKADLTRKLKFLDFAKSHY-I 330
Query: 337 SAISGTGTGELL 348
SA TG G L+
Sbjct: 331 SAAKKTGIGALM 342
>gi|121598397|ref|YP_993149.1| GTP-binding protein EngA [Burkholderia mallei SAVP1]
gi|217421388|ref|ZP_03452892.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei 576]
gi|237812544|ref|YP_002896995.1| GTP-binding protein EngA [Burkholderia pseudomallei MSHR346]
gi|238563546|ref|ZP_00438709.2| ribosome-associated GTPase EngA [Burkholderia mallei GB8 horse 4]
gi|242314802|ref|ZP_04813818.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei 1106b]
gi|251767656|ref|ZP_02268028.2| ribosome-associated GTPase EngA [Burkholderia mallei PRL-20]
gi|254197870|ref|ZP_04904292.1| GTP-binding protein EngA [Burkholderia pseudomallei S13]
gi|254199946|ref|ZP_04906312.1| GTP-binding protein EngA [Burkholderia mallei FMH]
gi|254206279|ref|ZP_04912631.1| GTP-binding protein EngA [Burkholderia mallei JHU]
gi|52426961|gb|AAU47554.1| GTPase family protein [Burkholderia mallei ATCC 23344]
gi|76581515|gb|ABA50990.1| GTPase family protein [Burkholderia pseudomallei 1710b]
gi|121227207|gb|ABM49725.1| GTPase family protein [Burkholderia mallei SAVP1]
gi|147749542|gb|EDK56616.1| GTP-binding protein EngA [Burkholderia mallei FMH]
gi|147753722|gb|EDK60787.1| GTP-binding protein EngA [Burkholderia mallei JHU]
gi|169654611|gb|EDS87304.1| GTP-binding protein EngA [Burkholderia pseudomallei S13]
gi|217395130|gb|EEC35148.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei 576]
gi|237503777|gb|ACQ96095.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei MSHR346]
gi|238520490|gb|EEP83949.1| ribosome-associated GTPase EngA [Burkholderia mallei GB8 horse 4]
gi|242138041|gb|EES24443.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei 1106b]
gi|243062055|gb|EES44241.1| ribosome-associated GTPase EngA [Burkholderia mallei PRL-20]
Length = 460
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 100/191 (52%), Gaps = 33/191 (17%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
+ P +A+VGRPNVGKS LFNRL A+V D PG+TRDR YG G +++VDTG
Sbjct: 14 HQMKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGARPYLVVDTG 73
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G V+K I+ ++A RQ A+EE+ V++F+
Sbjct: 74 GFEPVAKD--GILHEMA---------------------------RQTRQAVEEADVVVFI 104
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISA 338
VDG+ GL D+ IAD+LRK + I L VNK E K S+F+ LG P ISA
Sbjct: 105 VDGRNGLAPQDKSIADYLRKT--GRPIFLVVNKAEG-MKYTAVASDFYELGLGDPRAISA 161
Query: 339 ISGTGTGELLD 349
G G ++++
Sbjct: 162 AHGDGVNDMIN 172
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 91/211 (43%), Gaps = 52/211 (24%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVGRPNVGKS L N L+G +R I D PG TRD +Y + L+DT G+
Sbjct: 196 KIAIVGRPNVGKSTLVNTLIGEDRVIAFDMPGTTRDSIYVDFERNGKHYTLIDTAGLRRR 255
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K I E ++ T+ +I ++ V+I L+D +
Sbjct: 256 GKVFEAI-EKFSVVKTL--------------------------QSISDANVVILLLDARQ 288
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCES-------------PRKGIMQVSEFWSLGF 331
++ D IA ++ + + +++ VNK + RK ++ EF F
Sbjct: 289 DISDQDAHIAGFVVEQ--GRALVVGVNKWDGLDPHVRERTKADLARK--LKFLEFAKFHF 344
Query: 332 SPLPISAISGTGTGELL----DLVCSELKKV 358
ISA TG G L+ D + +KK+
Sbjct: 345 ----ISAAEKTGIGALMRSVDDAYAAAMKKL 371
>gi|149277444|ref|ZP_01883585.1| GTP-binding protein EngA [Pedobacter sp. BAL39]
gi|149231677|gb|EDM37055.1| GTP-binding protein EngA [Pedobacter sp. BAL39]
Length = 433
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 109/196 (55%), Gaps = 37/196 (18%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+AIVGRPNVGKS LFNRL +AIV D GVTRDR YG + W + +F ++DTGG + S
Sbjct: 5 IAIVGRPNVGKSTLFNRLTESRKAIVDDFSGVTRDRHYGSAEWTDKQFTVIDTGGYVANS 64
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
ED+ EAA I Q AIEE+ V++F+VD G
Sbjct: 65 -------EDVF---------------EAA-------IREQVVIAIEEATVLLFMVDVVTG 95
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQ--VSEFWSLGFSPL-PISAISGT 342
+T D++IA LR++ FI+ VNK ++ + +Q S F+ G + PIS+++G+
Sbjct: 96 ITDLDDDIAQLLRRSKKPVFIV--VNKVDNTQ---LQNDASVFYGFGLGEIYPISSMTGS 150
Query: 343 GTGELLDLVCSELKKV 358
GTG+LLD V + +
Sbjct: 151 GTGDLLDEVIKHFEDI 166
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 76/155 (49%), Gaps = 29/155 (18%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
E+ LP++ IVGRPNVGKS+L N L+G R IV G TRD ++ HEFM +DT
Sbjct: 170 ENALPKITIVGRPNVGKSSLINALIGKERNIVTPIAGTTRDSIHIHYNQFGHEFMFIDTA 229
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
G+ +K + NI E ++ TI A+EE+ V++ +
Sbjct: 230 GLRKKTKVKENI-EFYSVMRTI--------------------------KALEEADVVVLM 262
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
+D GL + D I KN K I++ VNK +
Sbjct: 263 IDAMEGLESQDVNIFHLAEKN--KKGIVILVNKWD 295
>gi|399527100|ref|ZP_10766827.1| ribosome-associated GTPase EngA [Actinomyces sp. ICM39]
gi|398362351|gb|EJN46053.1| ribosome-associated GTPase EngA [Actinomyces sp. ICM39]
Length = 517
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 101/194 (52%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +A+VGRPNVGKS L NR++G A+V D PGVTRDR+ + W +F LVDTGG
Sbjct: 81 LPVLAVVGRPNVGKSTLVNRILGRREAVVQDTPGVTRDRVSYPAEWAGRDFTLVDTGGW- 139
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
E V + + QA A++ + ++ ++D
Sbjct: 140 -----------------------------EIDVKGLDRSVAEQAEIAVDLADAVVLVLDA 170
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
G+TA+DE I + LR K IILA NK +SP + + WSLG P PISA+ G
Sbjct: 171 TVGVTASDERIVEMLRAK--KKPIILAANKVDSPLQE-ADAAYLWSLGLGEPYPISALHG 227
Query: 342 TGTGELLDLVCSEL 355
GTG+LLD+V L
Sbjct: 228 RGTGDLLDVVMEVL 241
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 38/63 (60%), Gaps = 12/63 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRD------RMYGRSFWGEHEFMLVDT 218
RVA+VGRPNVGKS+L N L GG R +V + G TRD + GRS+W VDT
Sbjct: 258 RVALVGRPNVGKSSLLNALAGGERVVVNELAGTTRDPVDELIELDGRSWW------FVDT 311
Query: 219 GGV 221
G+
Sbjct: 312 AGI 314
>gi|94986558|ref|YP_594491.1| GTP-binding protein EngA [Lawsonia intracellularis PHE/MN1-00]
gi|442555372|ref|YP_007365197.1| GTP-binding protein EngA [Lawsonia intracellularis N343]
gi|166225821|sp|Q1MS56.1|DER_LAWIP RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|94730807|emb|CAJ54169.1| predicted GTPases [Lawsonia intracellularis PHE/MN1-00]
gi|441492819|gb|AGC49513.1| GTP-binding protein EngA [Lawsonia intracellularis N343]
Length = 453
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/188 (42%), Positives = 103/188 (54%), Gaps = 24/188 (12%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGR-SFWGEHEFMLVDTGG 220
+LP++A+VGRPNVGKS LFNRL+ NRAI D PGVTRDRM G G F+L+DTGG
Sbjct: 1 MLPKIALVGRPNVGKSTLFNRLIRKNRAITHDRPGVTRDRMEGLVQSIGHPSFILIDTGG 60
Query: 221 V-LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
V L+ S NI+++L G E I +Q AIEES I +
Sbjct: 61 VILDSHYSTINIIDELH-----GFE---------------KDIFQQVQLAIEESQAICLI 100
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLPISAI 339
V+ + GL DE +A +LRK K I+LAVNK + K V+EF LG + +SA
Sbjct: 101 VNARDGLLPFDEHLALFLRKT--GKPILLAVNKVDGIEKEDQIVAEFHILGLPMIAVSAE 158
Query: 340 SGTGTGEL 347
G +L
Sbjct: 159 HGHNIRQL 166
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 94/194 (48%), Gaps = 38/194 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPN GKS++ N ++G N+ IV + G TRD + + + +++ VDT G+
Sbjct: 191 KLAIIGRPNAGKSSIINAIIGKNKLIVSNIAGTTRDSIDIPFIFNKTQYLFVDTAGIRRR 250
Query: 225 SK-SQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+K + P +E ++ +I + AT A + ++++D
Sbjct: 251 TKITDP--VERFSVNASI----------------------KSATKA----NITLYVIDAT 282
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCE---SPRKGIMQVSEFWSLGFSP----LPI 336
G+TA D+ + D L + IL +NK + +K ++ S L F P L +
Sbjct: 283 EGITAQDKRLLDLLDTRKIP--FILLINKTDLIAKKQKTLLSKSFKEELQFCPHIPILMV 340
Query: 337 SAISGTGTGELLDL 350
SA++ +G +++ +
Sbjct: 341 SAVTSSGLDQIIAM 354
>gi|53719151|ref|YP_108137.1| GTP-binding protein EngA [Burkholderia pseudomallei K96243]
gi|124383522|ref|YP_001026075.1| GTP-binding protein EngA [Burkholderia mallei NCTC 10229]
gi|126439512|ref|YP_001059220.1| GTP-binding protein EngA [Burkholderia pseudomallei 668]
gi|126449445|ref|YP_001080656.1| GTP-binding protein EngA [Burkholderia mallei NCTC 10247]
gi|126454834|ref|YP_001066487.1| GTP-binding protein EngA [Burkholderia pseudomallei 1106a]
gi|161579520|ref|YP_103001.2| GTP-binding protein EngA [Burkholderia mallei ATCC 23344]
gi|162210023|ref|YP_333745.2| GTP-binding protein EngA [Burkholderia pseudomallei 1710b]
gi|167719273|ref|ZP_02402509.1| GTP-binding protein EngA [Burkholderia pseudomallei DM98]
gi|167738270|ref|ZP_02411044.1| GTP-binding protein EngA [Burkholderia pseudomallei 14]
gi|167815459|ref|ZP_02447139.1| GTP-binding protein EngA [Burkholderia pseudomallei 91]
gi|167823871|ref|ZP_02455342.1| GTP-binding protein EngA [Burkholderia pseudomallei 9]
gi|167845410|ref|ZP_02470918.1| GTP-binding protein EngA [Burkholderia pseudomallei B7210]
gi|167902402|ref|ZP_02489607.1| GTP-binding protein EngA [Burkholderia pseudomallei NCTC 13177]
gi|167910644|ref|ZP_02497735.1| GTP-binding protein EngA [Burkholderia pseudomallei 112]
gi|167918673|ref|ZP_02505764.1| GTP-binding protein EngA [Burkholderia pseudomallei BCC215]
gi|254177966|ref|ZP_04884621.1| GTPase family protein [Burkholderia mallei ATCC 10399]
gi|254189054|ref|ZP_04895565.1| GTP-binding protein EngA [Burkholderia pseudomallei Pasteur 52237]
gi|254259698|ref|ZP_04950752.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei 1710a]
gi|254297432|ref|ZP_04964885.1| GTP-binding protein EngA [Burkholderia pseudomallei 406e]
gi|254358306|ref|ZP_04974579.1| GTP-binding protein EngA [Burkholderia mallei 2002721280]
gi|81824774|sp|Q63US9.1|DER_BURPS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|166224313|sp|A3MK70.1|DER_BURM7 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|166224314|sp|A2S2A6.1|DER_BURM9 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|166224315|sp|A3NVW6.1|DER_BURP0 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|166224316|sp|A3NA49.1|DER_BURP6 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|52209565|emb|CAH35518.1| putative GTPase [Burkholderia pseudomallei K96243]
gi|124291542|gb|ABN00811.1| ribosome-associated GTPase EngA [Burkholderia mallei NCTC 10229]
gi|126219005|gb|ABN82511.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei 668]
gi|126228476|gb|ABN92016.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei 1106a]
gi|126242315|gb|ABO05408.1| ribosome-associated GTPase EngA [Burkholderia mallei NCTC 10247]
gi|148027433|gb|EDK85454.1| GTP-binding protein EngA [Burkholderia mallei 2002721280]
gi|157808014|gb|EDO85184.1| GTP-binding protein EngA [Burkholderia pseudomallei 406e]
gi|157936733|gb|EDO92403.1| GTP-binding protein EngA [Burkholderia pseudomallei Pasteur 52237]
gi|160699005|gb|EDP88975.1| GTPase family protein [Burkholderia mallei ATCC 10399]
gi|254218387|gb|EET07771.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei 1710a]
Length = 445
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 100/189 (52%), Gaps = 33/189 (17%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+ P +A+VGRPNVGKS LFNRL A+V D PG+TRDR YG G +++VDTGG
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGARPYLVVDTGGF 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
V+K I+ ++A RQ A+EE+ V++F+VD
Sbjct: 61 EPVAKD--GILHEMA---------------------------RQTRQAVEEADVVVFIVD 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ GL D+ IAD+LRK + I L VNK E K S+F+ LG P ISA
Sbjct: 92 GRNGLAPQDKSIADYLRKT--GRPIFLVVNKAEG-MKYTAVASDFYELGLGDPRAISAAH 148
Query: 341 GTGTGELLD 349
G G ++++
Sbjct: 149 GDGVNDMIN 157
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 91/211 (43%), Gaps = 52/211 (24%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVGRPNVGKS L N L+G +R I D PG TRD +Y + L+DT G+
Sbjct: 181 KIAIVGRPNVGKSTLVNTLIGEDRVIAFDMPGTTRDSIYVDFERNGKHYTLIDTAGLRRR 240
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K I E ++ T+ +I ++ V+I L+D +
Sbjct: 241 GKVFEAI-EKFSVVKTL--------------------------QSISDANVVILLLDARQ 273
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCES-------------PRKGIMQVSEFWSLGF 331
++ D IA ++ + + +++ VNK + RK ++ EF F
Sbjct: 274 DISDQDAHIAGFVVEQ--GRALVVGVNKWDGLDPHVRERTKADLARK--LKFLEFAKFHF 329
Query: 332 SPLPISAISGTGTGELL----DLVCSELKKV 358
ISA TG G L+ D + +KK+
Sbjct: 330 ----ISAAEKTGIGALMRSVDDAYAAAMKKL 356
>gi|149926362|ref|ZP_01914623.1| GTP-binding protein EngA [Limnobacter sp. MED105]
gi|149824725|gb|EDM83939.1| GTP-binding protein EngA [Limnobacter sp. MED105]
Length = 441
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 105/195 (53%), Gaps = 33/195 (16%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+ P +A+VGRPNVGKS LFNRL A+V ++PG+TRDR YG G E+++VDTGG+
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRTRDALVANQPGLTRDRHYGVGRIGPREYLVVDTGGL 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
V+K I ++A +Q+ AI ES +++FLVD
Sbjct: 61 EPVAKD--GIYAEMA---------------------------KQSRQAIVESDLVLFLVD 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ G+T D IA LRK + +IL VNK E M ++F+ LG P ISA
Sbjct: 92 GRQGVTPHDHVIAAELRK--AKREVILVVNKTEGYTHS-MAAADFFELGLGEPETISASH 148
Query: 341 GTGTGELLDLVCSEL 355
G G +L+D+ C +L
Sbjct: 149 GDGVRQLMDIACEKL 163
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 73/151 (48%), Gaps = 29/151 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VAI GRPNVGKS + N L+G R I D PG TRD +Y + + L+DT G+
Sbjct: 177 KVAIAGRPNVGKSTMVNTLLGEERVIAFDLPGTTRDSIYIDFERNDKPYTLIDTAGLRKR 236
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K ++ E ++ T+ AIE++ V+I ++D Q
Sbjct: 237 GKVFESV-EKFSVIKTL--------------------------QAIEDANVVILMLDAQQ 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCES 315
++ D IA ++ + + ++LAVNK +S
Sbjct: 270 DISDQDASIAGFIVE--AGRSLVLAVNKWDS 298
>gi|118594978|ref|ZP_01552325.1| GTP-binding protein EngA [Methylophilales bacterium HTCC2181]
gi|118440756|gb|EAV47383.1| GTP-binding protein EngA [Methylophilales bacterium HTCC2181]
Length = 474
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/188 (41%), Positives = 105/188 (55%), Gaps = 33/188 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS+LFNRL A+V D PG+TRDR YG+ + +F+LVDTGG
Sbjct: 4 VAIVGRPNVGKSSLFNRLTKSRDALVADLPGLTRDRHYGKITIEDAQFILVDTGGF--EP 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
K + I + +A+ T + AI+E VI+F+VDG+ G
Sbjct: 62 KKKIGIAKKMALQTLL---------------------------AIDECDVILFVVDGREG 94
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP-LPISAISGTGT 344
L D+ IAD +RKN DK IL +NK E + I+ ++F+SLGF L IS+ G G
Sbjct: 95 LHPIDQHIADVIRKN--DKEKILLINKTEGMQHEIVG-ADFYSLGFKNILSISSAHGEGV 151
Query: 345 GELLDLVC 352
G L +L+
Sbjct: 152 GLLKELLV 159
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 71/152 (46%), Gaps = 29/152 (19%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P++ IVGRPNVGKS L N LVG R IV D+ G TRD + + F+L DT G+
Sbjct: 176 PKITIVGRPNVGKSTLVNALVGEERFIVFDQAGTTRDAVSVDFDFNGDRFVLTDTAGIRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K + E ++ T+ AA+E S VII ++D
Sbjct: 236 KGKVFETV-EKFSVLKTL--------------------------AAVESSDVIILVIDSS 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCES 315
G+ D + ++ + K I++A+NK +S
Sbjct: 269 GGIATQDMHLIGFILET--GKSIVIAINKWDS 298
>gi|387127022|ref|YP_006295627.1| GTP-binding protein EngA [Methylophaga sp. JAM1]
gi|386274084|gb|AFI83982.1| GTP-binding protein EngA [Methylophaga sp. JAM1]
Length = 469
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/199 (37%), Positives = 107/199 (53%), Gaps = 34/199 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P +A+VGRPNVGKS LFNRL A+V D G+TRDR+YG + E EF+L+DTGG+
Sbjct: 3 PVIALVGRPNVGKSTLFNRLTKTRNALVADHAGLTRDRIYGNARHDEAEFILIDTGGL-- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
Q + M DL + +QA AI E+ +I+F+VDG+
Sbjct: 61 --TVQGDDMSDL--------------------------MRKQAELAIVEADLILFVVDGK 92
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+ ADE IA LR + K ++L +NK ES +K + ++F+ LG P ISA G
Sbjct: 93 TGVVPADELIAKQLRN--VGKPVLLVINKTESEQKE-LAAADFYRLGLGEPEVISATQGR 149
Query: 343 GTGELLDLVCSELKKVEVC 361
G L++ + +L + +
Sbjct: 150 GISNLMNTLMRDLPAIRIV 168
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 90/194 (46%), Gaps = 38/194 (19%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+A+VGRPNVGKS L NRL+G +R + DEPG TRD +Y ++L+DT GV S
Sbjct: 185 LAVVGRPNVGKSTLVNRLLGEDRVVAFDEPGTTRDSIYIPFEKDGTNYILIDTAGVRRRS 244
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
K +E +I T+ AIE + V++ ++D G
Sbjct: 245 KVS-EALEKFSIVKTL--------------------------QAIEAANVVLLVLDAHQG 277
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRK--------GIMQVSEFWSLGFSPLPIS 337
+ D +A + ++ + +++AVNK + K I + F S + IS
Sbjct: 278 VVDQDLHLAGLIIES--GRAVVIAVNKWDGLEKQEREWVATNIERRLPFLSFAKTHF-IS 334
Query: 338 AISGTGTGELLDLV 351
A+ G+G G LL V
Sbjct: 335 ALHGSGVGLLLKSV 348
>gi|114562298|ref|YP_749811.1| GTP-binding protein EngA [Shewanella frigidimarina NCIMB 400]
gi|122300418|sp|Q085U2.1|DER_SHEFN RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|114333591|gb|ABI70973.1| small GTP-binding protein [Shewanella frigidimarina NCIMB 400]
Length = 488
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 102/196 (52%), Gaps = 40/196 (20%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YGR+F +EF++VDTGG
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAFLAGYEFIVVDTGG- 59
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ S+ I +A Q+ AAIEE+ V++F+ D
Sbjct: 60 --IDGSEEGIETKMA---------------------------EQSLAAIEEADVVLFMTD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSPL-PIS 337
+AG+TAAD IA LR DK + NK + GI EFWSLG + ++
Sbjct: 91 ARAGMTAADLAIAQHLRSR--DKVTFVVANKVD----GIDADSACGEFWSLGLGEVYQMA 144
Query: 338 AISGTGTGELLDLVCS 353
A G G ++D +
Sbjct: 145 AAQGRGVTNMIDYALT 160
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 95/197 (48%), Gaps = 36/197 (18%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTG 219
++L ++AI+G+PNVGKS L NR++G R +V DEPG TRD +Y E++L+DT
Sbjct: 196 QNLPIKLAIIGKPNVGKSTLINRILGEERVVVYDEPGTTRDSIYIPMSREGREYVLIDTA 255
Query: 220 GVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFL 279
GV SK ++E ++ T+ A+E++ V++ +
Sbjct: 256 GVRRRSKVN-EVIEKFSVIKTL--------------------------KAVEDANVVLLV 288
Query: 280 VDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQ--VSEF-WSLGFSPLP- 335
+D + G+ D + + + +++A+NK + + + SE LGF
Sbjct: 289 IDAREGIAEQDLGLLGFTLN--AGRALVIAINKWDGIDQKVKDRVKSELDRRLGFIDFAR 346
Query: 336 ---ISAISGTGTGELLD 349
ISA+ GTG G L +
Sbjct: 347 IHFISALHGTGVGHLYE 363
>gi|290968707|ref|ZP_06560245.1| ribosome-associated GTPase EngA [Megasphaera genomosp. type_1 str.
28L]
gi|335049710|ref|ZP_08542697.1| ribosome biogenesis GTPase Der [Megasphaera sp. UPII 199-6]
gi|290781360|gb|EFD93950.1| ribosome-associated GTPase EngA [Megasphaera genomosp. type_1 str.
28L]
gi|333762445|gb|EGL39943.1| ribosome biogenesis GTPase Der [Megasphaera sp. UPII 199-6]
Length = 443
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 107/196 (54%), Gaps = 32/196 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VA+VGRPNVGKS LFN +V AIV D PGVTRDR+Y + W EF ++DTGG+
Sbjct: 4 PLVAVVGRPNVGKSTLFNAIVKKRIAIVEDIPGVTRDRIYFDAEWLGREFTMIDTGGIEF 63
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
V A R+ + + QA AI E+ VI+F+VDG+
Sbjct: 64 VD----------------------------AADRIFTDMRYQAELAIREADVILFVVDGK 95
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
G+ DEE+A+ LR K ++L VNK +S + M + EF++LG P+ +SA++
Sbjct: 96 TGMQPQDEEVANILRT--CGKPVLLVVNKIDSVEQE-MNMYEFYALGMGDPIGVSAVNLM 152
Query: 343 GTGELLDLVCSELKKV 358
G+LLD V ++ +
Sbjct: 153 NLGDLLDSVLQHIQHL 168
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 74/149 (49%), Gaps = 29/149 (19%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
+A+VGRPNVGKS++ N L+G R IV + PG TRD + + + F+L+DT G+ +
Sbjct: 180 IALVGRPNVGKSSMTNALLGQERVIVSNVPGTTRDSIDTYWTYNDTSFVLIDTAGMRRKA 239
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
K + + +V R A A++ S V + ++D Q G
Sbjct: 240 K-------------------VDIPVERYSVVR--------ALRAVDRSDVAVLVLDAQDG 272
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCE 314
+T D++IA ++ + K I+ VNK +
Sbjct: 273 VTEQDKKIAGYIHE--AGKGCIIVVNKWD 299
>gi|407700806|ref|YP_006825593.1| GTP-binding protein Der [Alteromonas macleodii str. 'Black Sea 11']
gi|407249953|gb|AFT79138.1| GTP-binding protein Der [Alteromonas macleodii str. 'Black Sea 11']
Length = 481
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 109/188 (57%), Gaps = 34/188 (18%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP VA+VGRPNVGKS LFNRL A+V D PG+TRDR YG++ + + +F++VDTGG+
Sbjct: 1 MLPVVALVGRPNVGKSTLFNRLTNTRDALVADYPGLTRDRKYGQAKFEKRQFIVVDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
T EGI +A +A +Q+ AIEE+ V++FLVD
Sbjct: 61 ------------------TGDEEGI-----DAEMA-------QQSLLAIEEADVVLFLVD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLP-ISAIS 340
+AG+ AD+ IAD LR+ ++K + + NK + G + +EF+SLG + I+A
Sbjct: 91 ARAGMLPADQGIADHLRR--INKKVFVVANKVDGI-DGDSESAEFYSLGLGDIKQIAAAH 147
Query: 341 GTGTGELL 348
G G +LL
Sbjct: 148 GRGVSQLL 155
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 94/194 (48%), Gaps = 36/194 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVG+PNVGKS L NR++G R +V D PG TRD +Y E E++L+DT GV
Sbjct: 195 KLAIVGKPNVGKSTLTNRILGEERVVVFDMPGTTRDSVYIPMERDEREYILIDTAGVRKR 254
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K + E +I T+ AIEE+ V++ ++D +
Sbjct: 255 KKISEAV-EKFSIVKTL--------------------------QAIEEANVVLLVIDARE 287
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCE---SPRKGIMQVSEFWSLGFSPLP----IS 337
G+T D + ++ + + +++AVNK + + K ++ LGF IS
Sbjct: 288 GITDQDLSLLGFVLNS--GRSLVVAVNKWDGLSTDVKDDIKREMDRRLGFIDFARIHFIS 345
Query: 338 AISGTGTGELLDLV 351
A+ G+G G L + V
Sbjct: 346 ALHGSGVGNLFESV 359
>gi|401400113|ref|XP_003880715.1| hypothetical protein NCLIV_011480 [Neospora caninum Liverpool]
gi|325115126|emb|CBZ50682.1| hypothetical protein NCLIV_011480 [Neospora caninum Liverpool]
Length = 631
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/195 (38%), Positives = 97/195 (49%), Gaps = 32/195 (16%)
Query: 160 EHLLPRVAIVGRPNVGKSALFNRLVG----GNRAIVVDEPGVTRDRMYGRSFWGEHEFML 215
E PR+ ++GRPNVGKS+LFN+L AIV DE G TRDR Y S W F++
Sbjct: 162 EGQFPRICLLGRPNVGKSSLFNKLKDKEDLAADAIVRDEDGTTRDRHYAFSVWRGCPFVV 221
Query: 216 VDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCV 275
VDTGG++ ED A A I Q A+ E+
Sbjct: 222 VDTGGLI--------FEED-----------------RYAAALYAEEIRTQVQFALAEATC 256
Query: 276 IIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPL 334
IF+VDG+ GL DE IAD+LR+ +++ VNK E+ + G EFW LG P
Sbjct: 257 AIFVVDGRHGLAGEDEVIADFLRRAGTP--VVVCVNKTENYQSGHASAQEFWKLGLGQPF 314
Query: 335 PISAISGTGTGELLD 349
P SAI G G +LLD
Sbjct: 315 PCSAIEGVGLADLLD 329
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 36/56 (64%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
VAIVGRPNVGKS L NRL+G +R++V E G TRD + + LVDT G+
Sbjct: 396 VAIVGRPNVGKSQLLNRLLGVSRSLVSPEAGTTRDAVDELVERDSVVYRLVDTAGI 451
>gi|119897222|ref|YP_932435.1| GTP-binding protein EngA [Azoarcus sp. BH72]
gi|166224303|sp|A1K3Z3.1|DER_AZOSB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|119669635|emb|CAL93548.1| probable GTP-binding protein [Azoarcus sp. BH72]
Length = 442
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 106/191 (55%), Gaps = 33/191 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P + +VGRPNVGKS LFNRL A+V D+PG+TRDR YG G+ ++++VDT G
Sbjct: 3 PTIVLVGRPNVGKSTLFNRLTKTRDALVADQPGLTRDRHYGVGRVGDRDYLVVDTAGFDP 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
V+K IM ++A RQA AI E+ V++FLVDG+
Sbjct: 63 VAKD--GIMHEMA---------------------------RQAEQAIAEADVLLFLVDGR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGT 342
AG T D++IA LR+ + +++ VNK E + + ++F +LG +PL +SA G
Sbjct: 94 AGRTPHDDQIAAHLRR--AGRPVVVVVNKAEGLDRATV-AADFHALGLGAPLAVSAAHGD 150
Query: 343 GTGELLDLVCS 353
G L++LV +
Sbjct: 151 GVKALVELVLA 161
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 86/195 (44%), Gaps = 36/195 (18%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
PRVAIVGRPNVGKS L N L+G R I D PG TRD + G ++ L+DT G+
Sbjct: 177 PRVAIVGRPNVGKSTLVNTLLGEERVIAFDMPGTTRDAIAIPFERGGKQYTLIDTAGLRR 236
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K + E ++ T+ AI+E+ V++ ++D
Sbjct: 237 RGKVFEAV-EKFSVIKTL--------------------------QAIQEANVVVLVLDAA 269
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESP---RKGIMQVSEFWSLGFSPLP----I 336
++ D IA ++ + +++A+NK ++ R+ ++ L F I
Sbjct: 270 QDISDQDAHIAGFVLDT--GRALVVAINKWDAVDDYRRARLKEDMARKLAFLSFARFHQI 327
Query: 337 SAISGTGTGELLDLV 351
SA+ G LL V
Sbjct: 328 SALRAEGIAALLKSV 342
>gi|113969576|ref|YP_733369.1| GTP-binding protein EngA [Shewanella sp. MR-4]
gi|117919682|ref|YP_868874.1| GTP-binding protein EngA [Shewanella sp. ANA-3]
gi|123029832|sp|Q0HKV5.1|DER_SHESM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|166225858|sp|A0KUJ9.1|DER_SHESA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|113884260|gb|ABI38312.1| small GTP-binding protein [Shewanella sp. MR-4]
gi|117612014|gb|ABK47468.1| small GTP-binding protein [Shewanella sp. ANA-3]
Length = 488
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 102/196 (52%), Gaps = 40/196 (20%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YGR+F +EF++VDTGG+
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAFLSGYEFIVVDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
EGI E Q+ AAIEE+ V++F+ D
Sbjct: 61 DGTE------------------EGIETKMAE------------QSLAAIEEADVVLFMTD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSPL-PIS 337
+AGLTAAD IA LR F++ NK + GI +EFWSLG + ++
Sbjct: 91 ARAGLTAADLSIAQHLRSRQKTTFVV--ANKID----GIDADSACAEFWSLGLGEVYQMA 144
Query: 338 AISGTGTGELLDLVCS 353
A G G +++ +
Sbjct: 145 AAQGRGVTNMIEYALT 160
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 109/222 (49%), Gaps = 40/222 (18%)
Query: 135 QDETDDRKDSGKKQKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDE 194
++E D+R+ + ++ + + + ++P ++AI+G+PNVGKS L NR++G R +V DE
Sbjct: 174 EEEVDERQYTEEEAEAEQKRLQDLP----IKLAIIGKPNVGKSTLTNRILGEERVVVYDE 229
Query: 195 PGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAA 254
PG TRD +Y E++++DT GV SK ++E ++ T+
Sbjct: 230 PGTTRDSIYIPMERDGREYVIIDTAGVRRRSKVH-EVIEKFSVIKTL------------- 275
Query: 255 VARMPSMIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
A+E++ V++ ++D + G+ D + + + +++AVNK +
Sbjct: 276 -------------KAVEDANVVLLIIDAREGIAEQDLGLLGFALN--AGRALVIAVNKWD 320
Query: 315 SPRKGIMQ--VSEF-WSLGFSPLP----ISAISGTGTGELLD 349
+GI SE LGF ISA+ GTG G L +
Sbjct: 321 GIDQGIKDRVKSELDRRLGFIDFARIHFISALHGTGVGHLFE 362
>gi|114046809|ref|YP_737359.1| GTP-binding protein EngA [Shewanella sp. MR-7]
gi|123131595|sp|Q0HX53.1|DER_SHESR RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|113888251|gb|ABI42302.1| small GTP-binding protein [Shewanella sp. MR-7]
Length = 488
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 102/196 (52%), Gaps = 40/196 (20%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
++P VA+VGRPNVGKS LFNRL A+V D PG+TRDR YGR+F +EF++VDTGG+
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAFLSGYEFIVVDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
EGI E Q+ AAIEE+ V++F+ D
Sbjct: 61 DGTE------------------EGIETKMAE------------QSLAAIEEADVVLFMTD 90
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGI---MQVSEFWSLGFSPL-PIS 337
+AGLTAAD IA LR F++ NK + GI +EFWSLG + ++
Sbjct: 91 ARAGLTAADLSIAQHLRSRQKTTFVV--ANKID----GIDADSACAEFWSLGLGEVYQMA 144
Query: 338 AISGTGTGELLDLVCS 353
A G G +++ +
Sbjct: 145 AAQGRGVTNMIEYALT 160
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 109/222 (49%), Gaps = 40/222 (18%)
Query: 135 QDETDDRKDSGKKQKKRKTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDE 194
++E D+R+ + ++ + + + ++P ++AI+G+PNVGKS L NR++G R +V DE
Sbjct: 174 EEEVDERQYTEEEAEAEQKRLQDLP----IKLAIIGKPNVGKSTLTNRILGEERVVVYDE 229
Query: 195 PGVTRDRMYGRSFWGEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAA 254
PG TRD +Y E++++DT GV SK ++E ++ T+
Sbjct: 230 PGTTRDSIYIPMERDGREYVIIDTAGVRRRSKVH-EVIEKFSVIKTL------------- 275
Query: 255 VARMPSMIERQATAAIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
A+E++ V++ ++D + G+ D + + + +++AVNK +
Sbjct: 276 -------------KAVEDANVVLLIIDAREGVAEQDLGLLGFALN--AGRALVIAVNKWD 320
Query: 315 SPRKGIMQ--VSEF-WSLGFSPLP----ISAISGTGTGELLD 349
+GI SE LGF ISA+ GTG G L +
Sbjct: 321 GIDQGIKDRVKSELDRRLGFIDFARIHFISALHGTGVGHLFE 362
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.134 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,934,803,756
Number of Sequences: 23463169
Number of extensions: 263789676
Number of successful extensions: 1641305
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 13285
Number of HSP's successfully gapped in prelim test: 5424
Number of HSP's that attempted gapping in prelim test: 1583083
Number of HSP's gapped (non-prelim): 42883
length of query: 381
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 237
effective length of database: 8,980,499,031
effective search space: 2128378270347
effective search space used: 2128378270347
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 78 (34.7 bits)