BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016883
(381 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B2J1L2|DER_NOSP7 GTPase Der OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102)
GN=der PE=3 SV=1
Length = 456
Score = 179 bits (455), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/198 (49%), Positives = 124/198 (62%), Gaps = 32/198 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL G AIV DEPGVTRDR Y +FW EF++VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAGEQTAIVHDEPGVTRDRTYMPAFWNGREFLVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ D E +PL I +QA A+ E+C IF+VDG
Sbjct: 62 --------VFND-------DTEFLPL-------------IRQQAMTALAEACAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G T+AD+EIA+W+R+ + ++LAVNKCESP +G+MQ +EFW LG P PISAI G
Sbjct: 94 QTGPTSADQEIAEWMRQQRVP--VLLAVNKCESPDQGLMQAAEFWELGLGEPYPISAIHG 151
Query: 342 TGTGELLDLVCSELKKVE 359
+GTGELLD + + + VE
Sbjct: 152 SGTGELLDELVNHIPAVE 169
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 91/206 (44%), Gaps = 38/206 (18%)
Query: 155 IGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFM 214
+ ++PE +VAIVGRPNVGKS+L N VG RAIV G TRD + +
Sbjct: 168 VEDIPETNEIKVAIVGRPNVGKSSLLNAFVGEERAIVSPISGTTRDAIDTVIERDGQTYR 227
Query: 215 LVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESC 274
L+DT G+ + I T ++ R A AI +
Sbjct: 228 LIDTAGIRK-------------------KKHIEYGTEFFSINR--------AFKAIRRAD 260
Query: 275 VIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----L 329
V++ ++D G+T D+++A R + I+ VNK ++ K + ++ L
Sbjct: 261 VVLLVLDAVDGVTEQDQKLAG--RIIEEGRACIIVVNKWDAVEKDSYTIYDYEKTLQSRL 318
Query: 330 GFSPLP----ISAISGTGTGELLDLV 351
F+ +SA+SG ++L+LV
Sbjct: 319 HFTEWAETIFVSALSGQRVEKILELV 344
>sp|B8HQE1|DER_CYAP4 GTPase Der OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=der
PE=3 SV=1
Length = 453
Score = 174 bits (440), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 97/194 (50%), Positives = 120/194 (61%), Gaps = 32/194 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS L NRL G AIV D+PGVTRDR Y SFW + +F++VDTGG++
Sbjct: 3 LPVVAIVGRPNVGKSTLVNRLTGERVAIVHDQPGVTRDRTYRPSFWQDRDFLVVDTGGLV 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ E +PL I +Q A+ E+ V I +VDG
Sbjct: 63 FADDT----------------EFLPL-------------IRQQVVTALSEARVAILVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G+TAADEEIA WLR+ + +++AVNKCESP++G+ Q +EFW LG P PISAI G
Sbjct: 94 QQGITAADEEIAQWLRQQSLP--VLVAVNKCESPQQGLAQGAEFWELGLGEPFPISAIHG 151
Query: 342 TGTGELLDLVCSEL 355
GTGELLD V S L
Sbjct: 152 NGTGELLDQVVSYL 165
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 61/129 (47%), Gaps = 27/129 (20%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS+L N +VG RAIV G TRD + + L+DT G+
Sbjct: 180 VAIVGRPNVGKSSLLNAVVGEQRAIVSPISGTTRDAIDTLVERDGQRYRLIDTAGI---- 235
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+ Q N+ G E + +A AI+ + V++ ++D G
Sbjct: 236 RKQKNV--------DYGPEFFGI---------------NRAFKAIQRAEVVLLVLDALDG 272
Query: 286 LTAADEEIA 294
+T D+++A
Sbjct: 273 VTEQDQKLA 281
>sp|B7KHD2|DER_CYAP7 GTPase Der OS=Cyanothece sp. (strain PCC 7424) GN=der PE=3 SV=1
Length = 452
Score = 169 bits (428), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 97/198 (48%), Positives = 119/198 (60%), Gaps = 32/198 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL G +AIV DEPG+TRDR Y +FW + +F +VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAGDQQAIVHDEPGITRDRTYRPAFWQDRDFQVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I QA A+ E+ IF+VDG
Sbjct: 62 --------VFDD-------DTEFLPL-------------IREQAMTALAEAHAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G T ADEEIA+WLR + IILAVNKCES +G++Q SEFW LG P PIS+I G
Sbjct: 94 QTGPTPADEEIANWLRSQSVP--IILAVNKCESVEQGLIQASEFWQLGLGEPYPISSIHG 151
Query: 342 TGTGELLDLVCSELKKVE 359
+GTGELLD + L E
Sbjct: 152 SGTGELLDKLIIYLPTTE 169
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 92/196 (46%), Gaps = 38/196 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VAIVGRPNVGKS+L N L G NRAIV G TRD + E ++ L+DT G+
Sbjct: 178 KVAIVGRPNVGKSSLLNALTGENRAIVSPISGTTRDAIDMVVQRNEQQYRLIDTAGI--- 234
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + N+ G E + +A AI + V++F++D
Sbjct: 235 -RRKKNV--------EYGAEFFSI---------------NRAFKAIRRADVVLFVIDALD 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPLP--------- 335
G+T D ++A R + + +L +NK ++ K + E+ + S L
Sbjct: 271 GITDQDLKLAG--RISDEGRATVLVINKWDAVDKDSYTIYEYQKMLESRLYFMDWAEMIF 328
Query: 336 ISAISGTGTGELLDLV 351
+SA++G ++LDLV
Sbjct: 329 VSALTGKRVEKILDLV 344
>sp|Q3M929|DER_ANAVT GTPase Der OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937)
GN=der PE=3 SV=1
Length = 453
Score = 169 bits (428), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 97/194 (50%), Positives = 117/194 (60%), Gaps = 32/194 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL G AIV DEPGVTRDR Y ++W + EF +VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAGEQTAIVHDEPGVTRDRTYLPAYWSDREFQVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ D E +PL I +QA AA+ E+ IF+V+G
Sbjct: 62 --------VFND-------DTEFLPL-------------IRQQALAALHEASAAIFVVNG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G +ADEEIA+WLR+ + F LAVNKCESP +G +Q SEFW LG P PISAI G
Sbjct: 94 QTGPNSADEEIAEWLRQQPVPVF--LAVNKCESPDQGSIQASEFWELGLGEPYPISAIHG 151
Query: 342 TGTGELLDLVCSEL 355
GTGELLD + L
Sbjct: 152 NGTGELLDELIKHL 165
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 85/197 (43%), Gaps = 38/197 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS+L N G R IV G TRD + + L+DT G+
Sbjct: 178 KIAIIGRPNVGKSSLLNAFAGEERVIVSPISGTTRDAIDTFIERNGQNYRLIDTAGIRK- 236
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ I T ++ R A AI + V++ ++D
Sbjct: 237 ------------------KKSIDYGTEFFSINR--------AFKAIRRADVVLLVIDALD 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----LGFS----PLP 335
G+T D+++A + K ++ VNK ++ K + ++ L F+ +
Sbjct: 271 GVTEQDQKLAGRILDE--GKACVVVVNKWDAVEKDSYTIYDYEKNLEARLHFTEWADTIY 328
Query: 336 ISAISGTGTGELLDLVC 352
+SA++G ++L+LV
Sbjct: 329 VSAVTGQRVEKILELVT 345
>sp|B0JFL6|DER_MICAN GTPase Der OS=Microcystis aeruginosa (strain NIES-843) GN=der PE=3
SV=1
Length = 452
Score = 169 bits (428), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 94/194 (48%), Positives = 117/194 (60%), Gaps = 32/194 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NR+ G +AIV D+PG+TRDR Y +FW + +F +VDTGG++
Sbjct: 3 LPVVAIIGRPNVGKSTLVNRIAGDQQAIVFDQPGITRDRTYQPAFWCDRDFQIVDTGGLV 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
S E +PL I QA A+ E+ V IF+VDG
Sbjct: 63 FNDDS----------------EFLPL-------------IREQALIALAEASVAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G+TA D EIA WLR+ + I+LAVNKCES +GI+Q +EFW L P PISAI G
Sbjct: 94 QGGITAGDREIAAWLRQQNVP--ILLAVNKCESVEQGILQATEFWELAIGEPFPISAIHG 151
Query: 342 TGTGELLDLVCSEL 355
+GTGELLD V L
Sbjct: 152 SGTGELLDAVIKYL 165
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 93/206 (45%), Gaps = 44/206 (21%)
Query: 158 VPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVD 217
+PE+ +VAI+GRPNVGKS+L N L G RAIV G TRD + + L+D
Sbjct: 171 IPENEEIKVAIIGRPNVGKSSLLNALTGQQRAIVSPISGTTRDSIDTLIEREGQVYRLID 230
Query: 218 TGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVII 277
T G+ + + N+ G E + +A AI S V++
Sbjct: 231 TAGI----RRKKNV--------DYGAEFFSI---------------NRAFKAIRRSDVVL 263
Query: 278 FLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF----------- 326
F++D G+T D ++A R + ++L VNK ++ K ++ +
Sbjct: 264 FVIDVLDGVTEQDLKLAG--RIIEEGRAVVLVVNKWDAVEKDTYTINTYTKMLQDRLYFM 321
Query: 327 -WSLGFSPLPISAISGTGTGELLDLV 351
W+ + +SA++G ++L+LV
Sbjct: 322 DWA---EMIFVSAMTGQRVTKILELV 344
>sp|Q8YZH7|DER_NOSS1 GTPase Der OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=der PE=3
SV=1
Length = 453
Score = 169 bits (428), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 98/197 (49%), Positives = 118/197 (59%), Gaps = 32/197 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL G AIV DEPGVTRDR Y ++W + EF +VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAGEQTAIVHDEPGVTRDRTYLPAYWSDREFQVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ D E +PL I +QA AA+ E+ IF+V+G
Sbjct: 62 --------VFND-------DTEFLPL-------------IRQQALAALHEASAAIFVVNG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G +ADEEIA+WLR+ + F LAVNKCESP +G +Q SEFW LG P PISAI G
Sbjct: 94 QTGPNSADEEIAEWLRQQPVPVF--LAVNKCESPDQGSIQASEFWELGLGEPYPISAIHG 151
Query: 342 TGTGELLDLVCSELKKV 358
GTGELLD + L V
Sbjct: 152 NGTGELLDELIKHLPPV 168
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 85/197 (43%), Gaps = 38/197 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS+L N G R IV G TRD + + L+DT G+
Sbjct: 178 KIAIIGRPNVGKSSLLNAFAGEERVIVSPISGTTRDAIDTFIERDGQNYRLIDTAGIRK- 236
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ I T ++ R A AI + V++ ++D
Sbjct: 237 ------------------KKSIDYGTEFFSINR--------AFKAIRRADVVLLVIDALD 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----LGFS----PLP 335
G+T D+++A + K ++ VNK ++ K + ++ L F+ +
Sbjct: 271 GVTEQDQKLAGRILDE--GKACVVVVNKWDAVEKDSYTIYDYEKNLEARLHFTEWADTIY 328
Query: 336 ISAISGTGTGELLDLVC 352
+SA++G ++L+LV
Sbjct: 329 VSAVTGQRVEKILELVT 345
>sp|B1X0B0|DER_CYAA5 GTPase Der OS=Cyanothece sp. (strain ATCC 51142) GN=der PE=3 SV=1
Length = 452
Score = 166 bits (419), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 118/194 (60%), Gaps = 32/194 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL +AIV D+PG+TRDR Y +FW + +F +VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAKDRQAIVHDQPGITRDRTYRPAFWCDRDFQVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I QA AA+ E+ IF+VDG
Sbjct: 62 --------VFDD-------DTEFLPL-------------IREQAMAALTEASAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G TA D EI+DWLR+ + ++LAVNKCESP G++Q +EFW LG P PIS I G
Sbjct: 94 QLGPTAGDREISDWLRRQKVP--VLLAVNKCESPEMGLIQAAEFWELGLGEPYPISGIHG 151
Query: 342 TGTGELLDLVCSEL 355
+GTGELLD + + L
Sbjct: 152 SGTGELLDQLITYL 165
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 29/161 (18%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
V+I+GRPNVGKS+L N +G RAIV G TRD + G++ + L+DT G+
Sbjct: 179 VSIIGRPNVGKSSLLNAFLGEQRAIVSPISGTTRDAIDTVVERGDNTYRLIDTAGI---- 234
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+ + N+ G E + +A AI + V++ ++D G
Sbjct: 235 RRKKNV--------NYGAEFFSI---------------NRAFKAIRRADVVLLVIDAIDG 271
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
+T D ++AD R + I+ VNK ++ K + ++
Sbjct: 272 VTDQDIKLAD--RIIDEGRAAIIVVNKWDAVEKDSYTIYDY 310
>sp|Q5N167|DER_SYNP6 GTPase Der OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 /
SAUG 1402/1) GN=der PE=3 SV=1
Length = 453
Score = 165 bits (418), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 102/202 (50%), Positives = 125/202 (61%), Gaps = 32/202 (15%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL G AIV DEPGVTRDR Y +FW + +F +VDTGG+
Sbjct: 3 LPIVAILGRPNVGKSTLVNRLAGSREAIVHDEPGVTRDRTYQEAFWCDRDFTVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I QA A+ E+ + + +VDG
Sbjct: 62 --------VFDD-------DTEFLPL-------------IREQAELALAEAALAVLVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
QAGLTAAD EIADWLR + ++ I++AVNKCESP KG Q +EFWSLGF PLPIS+I G
Sbjct: 94 QAGLTAADNEIADWLR--HQNRPIVVAVNKCESPDKGAAQAAEFWSLGFGEPLPISSIHG 151
Query: 342 TGTGELLDLVCSELKKVEVCIG 363
+GTGELLD V L + G
Sbjct: 152 SGTGELLDRVLELLPPADEAAG 173
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 95/212 (44%), Gaps = 40/212 (18%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS+L N +G RAIV G TRD + + + LVDT G+
Sbjct: 180 VAIVGRPNVGKSSLLNSFLGEQRAIVSPIAGTTRDAIDTVIERNDQRYRLVDTAGI---- 235
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIE-RQATAAIEESCVIIFLVDGQA 284
R+ V P ++ AI + V + ++D
Sbjct: 236 ------------------------RRKRGVDYGPEFFGINRSFKAIRRADVCLLVIDVLD 271
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSE--------FWSLGFSPLP- 335
G+T D+++A + ++ + ++ VNK ++ K + E + L ++P+
Sbjct: 272 GVTDQDQKLAGRIEED--GRACVIVVNKWDAHEKDSSTIYEVERQLRDRLYFLDWAPMIF 329
Query: 336 ISAISGTGTGELLDLVCSELKKVEVCIGFLLI 367
+SA++G ++LD V + +++ +G +I
Sbjct: 330 VSALTGQRVEKILDQVNTVVEQHRRRVGTSVI 361
>sp|Q31KP9|DER_SYNE7 GTPase Der OS=Synechococcus elongatus (strain PCC 7942) GN=der PE=3
SV=1
Length = 453
Score = 165 bits (418), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 102/202 (50%), Positives = 125/202 (61%), Gaps = 32/202 (15%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL G AIV DEPGVTRDR Y +FW + +F +VDTGG+
Sbjct: 3 LPIVAILGRPNVGKSTLVNRLAGSREAIVHDEPGVTRDRTYQEAFWCDRDFTVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I QA A+ E+ + + +VDG
Sbjct: 62 --------VFDD-------DTEFLPL-------------IREQAELALAEAALAVLVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
QAGLTAAD EIADWLR + ++ I++AVNKCESP KG Q +EFWSLGF PLPIS+I G
Sbjct: 94 QAGLTAADNEIADWLR--HQNRPIVVAVNKCESPDKGAAQAAEFWSLGFGEPLPISSIHG 151
Query: 342 TGTGELLDLVCSELKKVEVCIG 363
+GTGELLD V L + G
Sbjct: 152 SGTGELLDRVLELLPPADEAAG 173
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 95/212 (44%), Gaps = 40/212 (18%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VAIVGRPNVGKS+L N +G RAIV G TRD + + + LVDT G+
Sbjct: 180 VAIVGRPNVGKSSLLNSFLGEQRAIVSPIAGTTRDAIDTVIERNDQRYRLVDTAGI---- 235
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIE-RQATAAIEESCVIIFLVDGQA 284
R+ V P ++ AI + V + ++D
Sbjct: 236 ------------------------RRKRGVDYGPEFFGINRSFKAIRRADVCLLVIDVLD 271
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSE--------FWSLGFSPLP- 335
G+T D+++A + ++ + ++ VNK ++ K + E + L ++P+
Sbjct: 272 GVTDQDQKLAGRIEED--GRACVIVVNKWDAHEKDSSTIYEVERQLRDRLYFLDWAPMIF 329
Query: 336 ISAISGTGTGELLDLVCSELKKVEVCIGFLLI 367
+SA++G ++LD V + +++ +G +I
Sbjct: 330 VSALTGQRVEKILDQVNTVVEQHRRRVGTSVI 361
>sp|B7K1S0|DER_CYAP8 GTPase Der OS=Cyanothece sp. (strain PCC 8801) GN=der PE=3 SV=1
Length = 452
Score = 164 bits (415), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 116/194 (59%), Gaps = 32/194 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL G AIV DEPG+TRDR Y FW + +F +VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTLANRLAGDQHAIVHDEPGITRDRTYRPGFWQDRDFQIVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I Q+ AA+ E+ IF+VDG
Sbjct: 62 --------VFDD-------DTEFLPL-------------IREQSLAALNEASAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISG 341
Q G T D EIADWLR+ + ++LAVNKCESP G++Q ++FW LG +P PIS I G
Sbjct: 94 QTGPTTGDLEIADWLRQQPVP--VLLAVNKCESPELGLIQATQFWELGLGNPYPISGIHG 151
Query: 342 TGTGELLDLVCSEL 355
GTGELLD + + L
Sbjct: 152 NGTGELLDDLITYL 165
Score = 68.6 bits (166), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 95/198 (47%), Gaps = 38/198 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VAI+GRPNVGKS+L N L+G NRAIV G TRD + E + L+DT G+
Sbjct: 178 KVAIIGRPNVGKSSLLNALLGENRAIVSPISGTTRDAIDTVIQHNEQTYRLIDTAGI--- 234
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + N+ G E + +A AI V++F++D
Sbjct: 235 -RRKKNV--------EYGAEFFSI---------------NRAFKAIRRCDVVLFVIDAID 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL------PI-- 336
G+T D ++AD R + ++L +NK ++ K + E+ + FS L PI
Sbjct: 271 GVTDQDLKLAD--RIIEEGRSVVLVINKWDAVDKDSYTIYEYKTNIFSRLYFMEWAPIIF 328
Query: 337 -SAISGTGTGELLDLVCS 353
SA++G ++L+LV S
Sbjct: 329 VSAMTGQRVNKILELVNS 346
>sp|P74120|DER_SYNY3 GTPase Der OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=der
PE=3 SV=1
Length = 452
Score = 163 bits (413), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 91/196 (46%), Positives = 116/196 (59%), Gaps = 36/196 (18%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS NRL G +AIV D+PG+TRDR Y +FW + +F +VDTGG++
Sbjct: 3 LPIVAIIGRPNVGKSTFVNRLAGNQQAIVHDQPGITRDRTYRPAFWRDRDFQVVDTGGLV 62
Query: 223 NVSKSQ--PNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLV 280
S+ P I E QA A+ E+ IF+V
Sbjct: 63 FNDDSEFLPEIRE-------------------------------QANLALAEAKAAIFVV 91
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAI 339
DGQ G TA+DEEIA WLR+ + +ILAVNKCESP +G +Q +EFW LG P P+SAI
Sbjct: 92 DGQQGPTASDEEIAQWLRQQSVP--VILAVNKCESPDQGAIQAAEFWHLGLGEPYPMSAI 149
Query: 340 SGTGTGELLDLVCSEL 355
G+GTG+LLD + L
Sbjct: 150 HGSGTGDLLDALLEYL 165
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 78/167 (46%), Gaps = 29/167 (17%)
Query: 159 PEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDT 218
PE +VAIVGRPNVGKS+L N L G RAIV G TRD + ++ L+DT
Sbjct: 172 PEEDEIKVAIVGRPNVGKSSLLNALTGEQRAIVSPISGTTRDAIDMVVERNGQKYRLIDT 231
Query: 219 GGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIF 278
G+ + + N+ G E + +A AI + V++F
Sbjct: 232 AGI----RRKKNV--------DYGAEFFGI---------------NRAFKAIRRADVVLF 264
Query: 279 LVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSE 325
++D G+T D ++A + ++ + ++L +NK ++ K + E
Sbjct: 265 VLDVLDGVTEQDLKLAGRIIED--GRAVVLVINKWDAVEKDSYTIYE 309
>sp|Q119L7|DER_TRIEI GTPase Der OS=Trichodesmium erythraeum (strain IMS101) GN=der PE=3
SV=1
Length = 453
Score = 163 bits (413), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/194 (47%), Positives = 115/194 (59%), Gaps = 32/194 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS + NRL AIV DEPG+TRDR Y ++W + EF +VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTIVNRLAESKDAIVHDEPGITRDRTYRNAYWEDREFQVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I QA AA+ E+ V IF+VDG
Sbjct: 62 --------VFDD-------NTEFLPL-------------IREQAMAALVEASVAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q GLT DEEIA WLR+ + I+LAVNKCES +G+ Q + FW LG P PIS I G
Sbjct: 94 QTGLTGGDEEIAQWLRQQTIP--ILLAVNKCESITEGLTQAAMFWELGLGEPYPISGIHG 151
Query: 342 TGTGELLDLVCSEL 355
GTGELLD + + L
Sbjct: 152 NGTGELLDDLITYL 165
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 78/165 (47%), Gaps = 29/165 (17%)
Query: 154 TIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEF 213
T G + E ++AIVGRPNVGKS+L N +G RAIV G TRD + +
Sbjct: 167 TQGEITETNQTKIAIVGRPNVGKSSLLNSFIGEKRAIVSPISGTTRDAIDTVVERNGKTY 226
Query: 214 MLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEES 273
L+DT G+ + + N+ G E + +A AI +
Sbjct: 227 RLIDTAGI----RKKKNV--------EYGAEFFGI---------------NRAFKAIRRA 259
Query: 274 CVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
V++F++D G+T D+++A+ + ++ + ++ VNK ++ K
Sbjct: 260 EVVMFVIDALDGVTEQDQKLANRIIED--GRACVIVVNKWDAIEK 302
>sp|Q8DKI1|DER_THEEB GTPase Der OS=Thermosynechococcus elongatus (strain BP-1) GN=der
PE=3 SV=1
Length = 449
Score = 162 bits (411), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 93/194 (47%), Positives = 119/194 (61%), Gaps = 32/194 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VA+VGRPNVGKS NRL G AIV DEPGVTRDR Y +FW + EF++VDTGG++
Sbjct: 3 LPIVAVVGRPNVGKSTFVNRLAGERDAIVHDEPGVTRDRTYRPAFWQDREFLVVDTGGLV 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
S + +PL I +QA A++E+ IF+VDG
Sbjct: 63 FDDDS----------------DFLPL-------------IRQQAELALQEATAAIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
QAG TA D EIA WLR+ + +++AVNKCES + G +Q +EFWSLG P PIS+I G
Sbjct: 94 QAGPTALDYEIAAWLRQ--LSLPVLVAVNKCESRQMGQVQAAEFWSLGLGEPYPISSIHG 151
Query: 342 TGTGELLDLVCSEL 355
+GTGELLD + + L
Sbjct: 152 SGTGELLDQLITYL 165
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 70/160 (43%), Gaps = 31/160 (19%)
Query: 157 NVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLV 216
+PE +VAI GRPNVGKS+L N L+G +RAIV G TRD + G ++ +
Sbjct: 170 TLPEAPEIQVAIAGRPNVGKSSLLNALIGSDRAIVSPISGTTRDAIDTVIEHGGTQYRFI 229
Query: 217 DTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIE-RQATAAIEESCV 275
DT G+ + VA P M +A AI S V
Sbjct: 230 DTAGI----------------------------RKRTHVAYGPEMFSVHRAFKAIHRSDV 261
Query: 276 IIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCES 315
++ ++D +T D+ +A + + +L VNK ++
Sbjct: 262 VLLVLDALEEITEQDQRLAGHIADQ--GRACVLIVNKWDA 299
>sp|A5GR60|DER_SYNR3 GTPase Der OS=Synechococcus sp. (strain RCC307) GN=der PE=3 SV=1
Length = 452
Score = 162 bits (410), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 93/192 (48%), Positives = 112/192 (58%), Gaps = 36/192 (18%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL AIV DEPGVTRDR Y FWG F +VDTGG++
Sbjct: 3 LPVVAIIGRPNVGKSTLVNRLCRSRDAIVHDEPGVTRDRTYQEGFWGGRTFRVVDTGGLV 62
Query: 223 --NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLV 280
+ S+ P I E QA+ A+ E+CV + +V
Sbjct: 63 FDDDSEFLPEIRE-------------------------------QASLAMAEACVALVIV 91
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAI 339
DGQ GLTAADE IA WLR+ ++L VNKCESP +G+ +EFW+LG P PISAI
Sbjct: 92 DGQQGLTAADEAIAAWLRQQKCP--VLLGVNKCESPEQGLAMAAEFWALGLGEPKPISAI 149
Query: 340 SGTGTGELLDLV 351
G GTG+LLD V
Sbjct: 150 HGAGTGDLLDQV 161
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 82/187 (43%), Gaps = 40/187 (21%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVGRPNVGKS+L N + G NRAIV G TRD + + L+DT G+
Sbjct: 178 QMAIVGRPNVGKSSLLNTVCGENRAIVSPIRGTTRDTIDTSIEREGQSWKLLDTAGI--- 234
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIE-RQATAAIEESCVIIFLVDGQ 283
R +V P ++ AIE S V + ++D +
Sbjct: 235 -------------------------RRRRSVNYGPEFFGINRSFKAIERSDVCVLVIDAE 269
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQV--------SEFWSLGFSP-L 334
G+T D+ +A R + ++ VNK + K + S+ + L ++P L
Sbjct: 270 EGVTEQDQRLAG--RIEEEGRACLVVVNKWDLVEKDSHTMPAMEKELRSKLYFLEWAPML 327
Query: 335 PISAISG 341
ISA++G
Sbjct: 328 FISALTG 334
>sp|Q3AI13|DER_SYNSC GTPase Der OS=Synechococcus sp. (strain CC9605) GN=der PE=3 SV=1
Length = 455
Score = 159 bits (403), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/195 (48%), Positives = 113/195 (57%), Gaps = 36/195 (18%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAI+GRPNVGKS L NRL AIV D+PGVTRDR Y +WG+ EF +VDTGG++
Sbjct: 4 PVVAIIGRPNVGKSTLVNRLCRSREAIVHDQPGVTRDRTYQDGYWGDREFKVVDTGGLVF 63
Query: 224 VSKSQ--PNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
S+ P I E QA A+EE+ V + +VD
Sbjct: 64 DDDSEFLPEIRE-------------------------------QAALALEEASVALVIVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
GQ GLTAADE IA++LR + +LAVNKCESP +G+ EFWSLG P PISAI
Sbjct: 93 GQQGLTAADESIAEFLRSHRCP--TLLAVNKCESPEQGLAMAGEFWSLGLGEPHPISAIH 150
Query: 341 GTGTGELLDLVCSEL 355
G GTGELLD V + L
Sbjct: 151 GAGTGELLDQVLTFL 165
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 68/155 (43%), Gaps = 31/155 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS+L N + G RAIV G TRD + + LVDT G+
Sbjct: 179 QMAIIGRPNVGKSSLLNAICGEQRAIVSPIRGTTRDTIDTSIIRENRPWRLVDTAGI--- 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIE-RQATAAIEESCVIIFLVDGQ 283
R +V P ++ AIE S V + ++D
Sbjct: 236 -------------------------RRRRSVNYGPEFFGINRSFKAIERSDVCVLVIDAL 270
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+T D+ +A + ++ + ++ VNK ++ K
Sbjct: 271 DGVTEQDQRLAGRIEED--GRACVVVVNKWDALEK 303
>sp|B1XLH8|DER_SYNP2 GTPase Der OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 /
PR-6) GN=der PE=3 SV=1
Length = 453
Score = 159 bits (403), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 118/194 (60%), Gaps = 32/194 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +A++GRPNVGKS L NR+ G +AIV D+PG+TRDR Y FW + F +VDTGG+
Sbjct: 3 LPIIAVIGRPNVGKSTLVNRIAGDQQAIVHDQPGITRDRTYRPGFWQDRNFQIVDTGGI- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +PL I QA A+ E+ V +F+VDG
Sbjct: 62 --------VFDDHE-------EFLPL-------------IREQAAIALAEAAVALFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISG 341
QAGL AAD+EIADWLR+ + ++LAVNKCES +G Q +EFW LG P PISAI G
Sbjct: 94 QAGLNAADQEIADWLRQQNVP--VVLAVNKCESLEQGYTQAAEFWELGMEEPFPISAIHG 151
Query: 342 TGTGELLDLVCSEL 355
+GTG+LLD V L
Sbjct: 152 SGTGDLLDKVIEYL 165
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 44/210 (20%)
Query: 154 TIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEF 213
TI +V E VAI+GRPNVGKS+L N L G RAIV G TRD + ++
Sbjct: 167 TITDVEEDTTINVAIIGRPNVGKSSLLNALTGEQRAIVSPISGTTRDAIDTIIERNGQQY 226
Query: 214 MLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEES 273
L+DT G+ + + N+ G E + +A AI +
Sbjct: 227 RLIDTAGI----RRKKNV--------DYGAEFFSI---------------NRAFKAIRRA 259
Query: 274 CVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF------- 326
V++F++D G+T D ++A R + +I+ NK ++ K ++++
Sbjct: 260 DVVLFVIDVLDGVTEQDLKLAG--RIIDEGRAVIIVANKWDAVEKDTYTINQYRKELQAR 317
Query: 327 -----WSLGFSPLPISAISGTGTGELLDLV 351
W+ L ISA +G ++LDLV
Sbjct: 318 LFFMEWA---EMLFISAQTGQRVNKILDLV 344
>sp|B0C1P2|DER_ACAM1 GTPase Der OS=Acaryochloris marina (strain MBIC 11017) GN=der PE=3
SV=1
Length = 453
Score = 159 bits (401), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 91/191 (47%), Positives = 111/191 (58%), Gaps = 32/191 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS L NRL G AIV D PGVTRDR Y + W +F LVDTGG+
Sbjct: 3 LPIVAIVGRPNVGKSTLVNRLTGMMDAIVHDSPGVTRDRTYRPALWNGRDFSLVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ +D E +P I +Q A+ E+ V++ +VDG
Sbjct: 62 --------VFDDQT-------EFLPF-------------IRQQVMIALAEATVVVMVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISG 341
QAG T AD EIA WLR+ D ++LAVNKCESP +GI Q ++FW L PLP+S I G
Sbjct: 94 QAGPTPADHEIAHWLRQQ--DTPVLLAVNKCESPEQGITQAAQFWELSLDEPLPVSGIHG 151
Query: 342 TGTGELLDLVC 352
GTG+LLD V
Sbjct: 152 NGTGDLLDQVV 162
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 40/205 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VA+VGRPNVGKS+L N VG NR+IV G TRD + GE + +DT G+
Sbjct: 178 KVALVGRPNVGKSSLLNAFVGENRSIVSPISGTTRDTIDMVVRRGEQTYRFIDTAGI--- 234
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIE-RQATAAIEESCVIIFLVDGQ 283
R+ V+ P +A AI S V++F++D
Sbjct: 235 -------------------------RRKKNVSYGPEFFGINRAFKAIRRSQVVLFVIDAL 269
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-----LGFSPLP--- 335
G+T D+++A + + + +L VNK ++ K ++EF L F
Sbjct: 270 DGVTEQDQKLAGRIIDD--GRACVLVVNKWDAVTKDTYTINEFSKQIRSRLNFMEWAEMI 327
Query: 336 -ISAISGTGTGELLDLVCSELKKVE 359
+SA +G ++L+LV + ++ E
Sbjct: 328 FVSAQTGQRVEKILNLVDTAARQFE 352
>sp|Q0ICK8|DER_SYNS3 GTPase Der OS=Synechococcus sp. (strain CC9311) GN=der PE=3 SV=1
Length = 455
Score = 158 bits (399), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 92/195 (47%), Positives = 111/195 (56%), Gaps = 36/195 (18%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAI+GRPNVGKS L NRL AIV D+PGVTRDR Y +WG+ EF +VDTGG++
Sbjct: 4 PVVAIIGRPNVGKSTLVNRLCRSREAIVHDQPGVTRDRTYQDGYWGDREFKVVDTGGLVF 63
Query: 224 VSKSQ--PNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
S+ P I E QA+ A+ E+ V + +VD
Sbjct: 64 DDDSEFLPEIRE-------------------------------QASLALAEASVALVIVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
GQ GLTAADE IA+WLR +LAVNKCESP +G+ +EFW LG P PISAI
Sbjct: 93 GQQGLTAADESIAEWLRTQNCK--TLLAVNKCESPEQGLGMAAEFWRLGLGEPHPISAIH 150
Query: 341 GTGTGELLDLVCSEL 355
G GT ELLD V + L
Sbjct: 151 GAGTAELLDQVLTFL 165
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 69/155 (44%), Gaps = 31/155 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+++I+GRPNVGKS+L N + G RAIV G TRD + R + L+DT G+
Sbjct: 179 QLSIIGRPNVGKSSLLNSICGETRAIVSPIRGTTRDTIDTRIERENRRWRLIDTAGI--- 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIE-RQATAAIEESCVIIFLVDGQ 283
R +V P ++ AIE S V + ++D
Sbjct: 236 -------------------------RRRRSVNYGPEFFGINRSFKAIERSDVCVLVIDAL 270
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+T D+ +A + ++ + ++ VNK ++ K
Sbjct: 271 DGVTEQDQRLAGRIEED--GRACVVVVNKWDAVEK 303
>sp|A2BV51|DER_PROM5 GTPase Der OS=Prochlorococcus marinus (strain MIT 9515) GN=der PE=3
SV=1
Length = 458
Score = 158 bits (399), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 93/196 (47%), Positives = 113/196 (57%), Gaps = 32/196 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AI+GRPNVGKS L NRL N AIV D+PGVTRDR Y + WG EF +VDTGG+
Sbjct: 3 LPSIAIIGRPNVGKSTLVNRLCQSNDAIVFDKPGVTRDRTYQNASWGGKEFQVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ ED + E +P I Q A+EE+ + +F+VDG
Sbjct: 62 --------VFEDDS-------EFLP-------------EIRTQVFLALEEASIALFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
G+T D IA WLR + D I+AVNKCES GI SEFW LG P P+SAI G
Sbjct: 94 NQGVTTGDLSIAKWLRNS--DCKTIVAVNKCESLSLGISMASEFWKLGLGEPYPVSAIHG 151
Query: 342 TGTGELLDLVCSELKK 357
+GTG+LLDLV EL K
Sbjct: 152 SGTGDLLDLVIDELPK 167
Score = 52.0 bits (123), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 83/185 (44%), Gaps = 38/185 (20%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
++I+GRPNVGKS+L N + G RAIV D G T D + H + +VDT G+
Sbjct: 180 MSIIGRPNVGKSSLLNAICGEKRAIVSDISGTTTDSIDTLIKKNSHLWKIVDTAGI---- 235
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+ + N + T + R A +I+ S V + ++D G
Sbjct: 236 RRKKN---------------VKYGTEFFGINR--------AFKSIDRSDVCVLVIDAIDG 272
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQV-----SEFWSLGFSPLP-I 336
+T D+++A R + ++ VNK E I QV S+ + L +S + I
Sbjct: 273 VTDQDQKLAG--RIEEQGRACVIVVNKWDLVEKNNSTIYQVEKELRSKLYFLHWSKMIFI 330
Query: 337 SAISG 341
SA++G
Sbjct: 331 SALTG 335
>sp|Q7U8G2|DER_SYNPX GTPase Der OS=Synechococcus sp. (strain WH8102) GN=der PE=3 SV=1
Length = 455
Score = 158 bits (399), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 93/195 (47%), Positives = 113/195 (57%), Gaps = 36/195 (18%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAI+GRPNVGKS L NRL AIV DEPGVTRDR Y +WG+ EF +VDTGG++
Sbjct: 4 PVVAIIGRPNVGKSTLVNRLCRSREAIVHDEPGVTRDRTYQDGYWGDREFKVVDTGGLVF 63
Query: 224 VSKSQ--PNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
S+ P I E QA A+EE+ V + +VD
Sbjct: 64 DDDSEFLPEIRE-------------------------------QAALAMEEASVAVVIVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
GQ G+TAADE IA++LR +LAVNKCESP +G+ +EFWSLG P PISAI
Sbjct: 93 GQQGITAADESIAEFLRSRPCP--TLLAVNKCESPEQGLAMAAEFWSLGLGEPHPISAIH 150
Query: 341 GTGTGELLDLVCSEL 355
G GTG+LLD V + L
Sbjct: 151 GVGTGDLLDQVLTFL 165
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 68/155 (43%), Gaps = 31/155 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS+L N + G RAIV G TRD + + LVDT G+
Sbjct: 179 QMAIIGRPNVGKSSLLNAICGEQRAIVSPIRGTTRDTIDTNIVRENRPWRLVDTAGI--- 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIE-RQATAAIEESCVIIFLVDGQ 283
R +V P ++ AI+ S V + ++D
Sbjct: 236 -------------------------RRRRSVNYGPEYFGINRSFKAIDRSDVCVLVIDAL 270
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+T D+ +A + ++ + ++ VNK ++ K
Sbjct: 271 DGVTEQDQRLAGRIEED--GRACVVVVNKWDAVEK 303
>sp|Q7V8X0|DER_PROMM GTPase Der OS=Prochlorococcus marinus (strain MIT 9313) GN=der PE=3
SV=1
Length = 455
Score = 157 bits (396), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/195 (47%), Positives = 111/195 (56%), Gaps = 36/195 (18%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL- 222
P VAI+GRPNVGKS L NRL AIV D+PGVTRDR Y FWG+ EF +VDTGG++
Sbjct: 4 PIVAIIGRPNVGKSTLVNRLCRSREAIVDDKPGVTRDRTYQDGFWGDREFKVVDTGGLVF 63
Query: 223 -NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ S+ P I E QA A+ E+ V + +VD
Sbjct: 64 DDDSEFLPEIRE-------------------------------QANLALAEASVALVIVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
GQ G+TAADE IA+WLR + AVNKCESP +G+ +EFW LG P PISAI
Sbjct: 93 GQQGVTAADESIAEWLRTQPCPTLV--AVNKCESPDQGLAMAAEFWRLGLGEPFPISAIH 150
Query: 341 GTGTGELLDLVCSEL 355
G GTG+LLD V S L
Sbjct: 151 GAGTGDLLDRVLSLL 165
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 73/167 (43%), Gaps = 37/167 (22%)
Query: 159 PEHLLP------RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHE 212
P+H P ++AI+GRPNVGKS+L N + G RAIV G TRD + R H
Sbjct: 167 PKHEEPEEDEPIQMAIIGRPNVGKSSLLNAICGEPRAIVSPIRGTTRDTIDTRLEREGHP 226
Query: 213 FMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIE-RQATAAIE 271
+ L+DT G+ R +V P ++ AIE
Sbjct: 227 WRLIDTAGI----------------------------RRRRSVNYGPEFFGINRSFKAIE 258
Query: 272 ESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
S V + ++D G+T D+ +A + + + +L VNK ++ K
Sbjct: 259 RSDVCVLVIDALDGVTEQDQRLAGRIEDD--GRACVLVVNKWDAVEK 303
>sp|Q7VDI8|DER_PROMA GTPase Der OS=Prochlorococcus marinus (strain SARG / CCMP1375 /
SS120) GN=der PE=3 SV=1
Length = 456
Score = 157 bits (396), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/195 (47%), Positives = 111/195 (56%), Gaps = 36/195 (18%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAI+GRPNVGKS L NRL AIV D+PGVTRDR Y FWG+ EF LVDTGG++
Sbjct: 4 PIVAIIGRPNVGKSTLVNRLCQSREAIVHDQPGVTRDRSYQDGFWGDREFKLVDTGGLVF 63
Query: 224 VSKSQ--PNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+++ P I E QA A+ E+ + + +VD
Sbjct: 64 DDETEFLPEIRE-------------------------------QANLALSEASIALLIVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
GQ GLTAADE IA WLR + + I+LAVNKCES G+ EFW LG P P+SAI
Sbjct: 93 GQQGLTAADEVIAAWLRHSKCE--ILLAVNKCESVELGLSMAGEFWRLGLGEPYPVSAIH 150
Query: 341 GTGTGELLDLVCSEL 355
G GTGELLD + S L
Sbjct: 151 GAGTGELLDRLISIL 165
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 66/155 (42%), Gaps = 31/155 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VAIVGRPNVGKS+L N + G RAIV G TRD + + L+DT G+
Sbjct: 179 QVAIVGRPNVGKSSLLNAICGEKRAIVSAIRGTTRDTIDTSIVREGKLWKLIDTAGI--- 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIE-RQATAAIEESCVIIFLVDGQ 283
R +V P ++ AIE S V + ++D
Sbjct: 236 -------------------------RRRKSVNYGPEFFGINRSFKAIERSDVCVLVIDAL 270
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+T D+ +A R + ++ VNK ++ K
Sbjct: 271 DGVTEQDQRLAG--RIEEEGRACLVVVNKWDAVEK 303
>sp|A5GJ79|DER_SYNPW GTPase Der OS=Synechococcus sp. (strain WH7803) GN=der PE=3 SV=1
Length = 455
Score = 155 bits (393), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 91/195 (46%), Positives = 112/195 (57%), Gaps = 36/195 (18%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAI+GRPNVGKS L NRL AIV DEPGVTRDR Y +WG+ +F +VDTGG++
Sbjct: 4 PVVAIIGRPNVGKSTLVNRLCHSREAIVHDEPGVTRDRTYQDGYWGDRDFKVVDTGGLVF 63
Query: 224 VSKSQ--PNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
S+ P I E QA A+EE+ V + +VD
Sbjct: 64 DDDSEFLPEIRE-------------------------------QAALALEEASVALVIVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
GQ G+TA+DE IA++LR +LAVNKCESP +G+ +EFWSLG P PISAI
Sbjct: 93 GQQGVTASDEAIAEFLRGQRCPA--LLAVNKCESPEQGLAMAAEFWSLGLGEPYPISAIH 150
Query: 341 GTGTGELLDLVCSEL 355
G GT ELLD V + L
Sbjct: 151 GAGTAELLDQVLTYL 165
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 68/155 (43%), Gaps = 31/155 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AI+GRPNVGKS+L N + G RAIV G TRD + + LVDT G+
Sbjct: 179 QLAIIGRPNVGKSSLLNAICGEQRAIVSPIRGTTRDTIDTSLVRENRPWRLVDTAGI--- 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIE-RQATAAIEESCVIIFLVDGQ 283
R +V P ++ AIE S V + ++D
Sbjct: 236 -------------------------RRRRSVNYGPEFFGINRSFKAIERSDVCVLVIDAL 270
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+T D+ +A + ++ + ++ VNK ++ K
Sbjct: 271 DGVTEQDQRLAGRIEED--GRACVVVVNKWDAVEK 303
>sp|Q31CE7|DER_PROM9 GTPase Der OS=Prochlorococcus marinus (strain MIT 9312) GN=der PE=3
SV=1
Length = 457
Score = 151 bits (382), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 89/195 (45%), Positives = 111/195 (56%), Gaps = 32/195 (16%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP +AI+GRPNVGKS L NRL N AIV D+PGVTRDR Y + WG EF +VDTGG+
Sbjct: 2 ILPTIAIIGRPNVGKSTLVNRLCQSNDAIVFDKPGVTRDRTYQNASWGGKEFQIVDTGGL 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ +D + E +P I Q A+EE+ + + +VD
Sbjct: 62 ---------VFDDDS-------EFLP-------------EIRAQVFLALEEASLALLVVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G G+T D IA WLR + I+AVNKCES GI SEFW LG P P+SAI
Sbjct: 93 GNQGVTDGDLSIAKWLRNSSCK--TIIAVNKCESTTLGISLASEFWKLGLGEPYPVSAIH 150
Query: 341 GTGTGELLDLVCSEL 355
G+GTG+LLDLV EL
Sbjct: 151 GSGTGDLLDLVIGEL 165
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 44/202 (21%)
Query: 155 IGNVPEHLLPR------VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFW 208
IG +PE+ + ++I+GRPNVGKS+L N + G RAIV D G T D +
Sbjct: 162 IGELPENNIQEEEEKIMMSIIGRPNVGKSSLLNSISGEKRAIVSDISGTTTDSIDTLIKK 221
Query: 209 GEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATA 268
G+ ++ +VDT G+ + + N + T + R A
Sbjct: 222 GDTQWKIVDTAGI----RRKKN---------------VKYGTEFFGINR--------AFK 254
Query: 269 AIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKG---IMQV-- 323
+I+ S V + ++D G+T D+++A R + I+ +NK + K I QV
Sbjct: 255 SIDRSDVCVLVIDAIDGVTDQDQKLAG--RIEEQGRACIIVINKWDLVEKNSSTIYQVEK 312
Query: 324 ---SEFWSLGFSPLP-ISAISG 341
S+ + L +S + ISA++G
Sbjct: 313 ELRSKLYFLHWSKMIFISALTG 334
>sp|Q3AZ65|DER_SYNS9 GTPase Der OS=Synechococcus sp. (strain CC9902) GN=der PE=3 SV=1
Length = 455
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/195 (45%), Positives = 112/195 (57%), Gaps = 36/195 (18%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAI+GRPNVGKS L NRL AIV D+PGVTRDR Y +WG+ EF +VDTGG++
Sbjct: 4 PVVAIIGRPNVGKSTLVNRLCRSREAIVHDQPGVTRDRTYQDGYWGDREFKVVDTGGLVF 63
Query: 224 VSKSQ--PNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
S+ P I E QA A++E+ V + +VD
Sbjct: 64 DDDSEFLPEIRE-------------------------------QAALALDEASVALVIVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ GLTAADE IA++LR+ +LAVNKCES +G+ +EFWSLG P PISAI
Sbjct: 93 GKQGLTAADESIAEFLRQQRCP--TLLAVNKCESVEQGLAMAAEFWSLGLGEPYPISAIH 150
Query: 341 GTGTGELLDLVCSEL 355
G GT E+LD V + L
Sbjct: 151 GAGTAEVLDQVLTFL 165
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 68/155 (43%), Gaps = 31/155 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+++I+GRPNVGKS+L N + G RAIV G TRD + + LVDT G+
Sbjct: 179 QMSIIGRPNVGKSSLLNAICGEQRAIVSPIRGTTRDTIDTNIVRENRPWRLVDTAGI--- 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIE-RQATAAIEESCVIIFLVDGQ 283
R +V P ++ AIE S V + ++D
Sbjct: 236 -------------------------RRRRSVNYGPEYFGINRSFKAIERSDVCVLVIDAL 270
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
G+T D+ +A + ++ + ++ VNK ++ K
Sbjct: 271 DGVTEQDQRLAGRIEED--GRACVVVVNKWDAVEK 303
>sp|A2BPL9|DER_PROMS GTPase Der OS=Prochlorococcus marinus (strain AS9601) GN=der PE=3
SV=1
Length = 457
Score = 150 bits (380), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/195 (45%), Positives = 110/195 (56%), Gaps = 32/195 (16%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP +AI+GRPNVGKS L NRL N AIV D+PGVTRDR Y + WG EF +VDTGG+
Sbjct: 2 ILPTIAIIGRPNVGKSTLVNRLCQSNDAIVFDKPGVTRDRTYQNASWGGKEFQIVDTGGL 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ +S E +P I Q A+EE+ + + +VD
Sbjct: 62 VFDDES----------------EFLP-------------EIRTQVFLALEEASLALLVVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G G+T D IA WLR + I+AVNKCES GI SEFW LG P P+SAI
Sbjct: 93 GNQGVTDGDLSIAKWLRNSSCK--TIVAVNKCESTTLGISLASEFWKLGLGEPNPVSAIH 150
Query: 341 GTGTGELLDLVCSEL 355
G+GTG+LLDLV EL
Sbjct: 151 GSGTGDLLDLVIGEL 165
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 44/202 (21%)
Query: 155 IGNVPEHLLP------RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFW 208
IG +PE+ + ++I+GRPNVGKS+L N + G RAIV D G T D +
Sbjct: 162 IGELPENNIQDDEEKIMMSIIGRPNVGKSSLLNSICGEKRAIVSDISGTTTDSIDTLIKK 221
Query: 209 GEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATA 268
G++ + ++DT G+ + + N + T + R A
Sbjct: 222 GDNNWKIIDTAGI----RRKKN---------------VKYGTEFFGINR--------AFK 254
Query: 269 AIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKG---IMQV-- 323
+I+ S V + ++D G+T D+++A R + I+ VNK + K I QV
Sbjct: 255 SIDRSDVCVLVIDAVDGVTDQDQKLAG--RIEEQGRACIIVVNKWDLIEKNSSTIYQVEK 312
Query: 324 ---SEFWSLGFSPLP-ISAISG 341
S+ + L +S + ISA++G
Sbjct: 313 ELRSKLYFLHWSKMIFISALTG 334
>sp|B9LBT6|DER_CHLSY GTPase Der OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637
/ Y-400-fl) GN=der PE=3 SV=1
Length = 449
Score = 150 bits (379), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/193 (46%), Positives = 114/193 (59%), Gaps = 27/193 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS FNRL+G RAIV D PG TRDR+YG +FW EF +VDT GVL
Sbjct: 4 PIVAIVGRPNVGKSTFFNRLIGERRAIVEDLPGTTRDRLYGDTFWNGREFTVVDTAGVL- 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
PN+ EA +AR QA AI E+ IIF+VDG+
Sbjct: 63 FGGEDPNLP-------------------EAEIARRTRA---QAEHAIAEADAIIFIVDGR 100
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLTAAD ++AD LR K ++LAVNKC+S + ++ EF++L P+P+SA G
Sbjct: 101 DGLTAADSDVADVLRTT--SKPVVLAVNKCDSQER-MLDAVEFYALNLGEPIPMSAFHGL 157
Query: 343 GTGELLDLVCSEL 355
GTG++LD + L
Sbjct: 158 GTGDVLDRLTEYL 170
Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 94/207 (45%), Gaps = 40/207 (19%)
Query: 152 KTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEH 211
KT HL R+AIVGRPNVGKS+L NRL+G R++V PG TRD + +
Sbjct: 173 KTFTQEEERHL--RIAIVGRPNVGKSSLLNRLLGQERSVVSSIPGTTRDPIDTTITYHGE 230
Query: 212 EFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIE 271
L+DT G+ K + I E ++ T+ AIE
Sbjct: 231 PITLIDTAGIRRAGKIERGI-EKYSVLRTL--------------------------RAIE 263
Query: 272 ESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIM-------QVS 324
V + L+D G+TA D IA + + K +IL VNK ++ K QV
Sbjct: 264 RCDVALLLIDATEGVTAQDTHIAGMVVE--AKKGLILVVNKWDAIEKDSHTYYAFQDQVR 321
Query: 325 E-FWSLGFSPLP-ISAISGTGTGELLD 349
E F + ++P+ +SA++G LLD
Sbjct: 322 EAFKFVDYAPIVFVSALTGQRVSHLLD 348
>sp|A9WHH9|DER_CHLAA GTPase Der OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635
/ J-10-fl) GN=der PE=3 SV=1
Length = 449
Score = 150 bits (379), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/193 (46%), Positives = 114/193 (59%), Gaps = 27/193 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS FNRL+G RAIV D PG TRDR+YG +FW EF +VDT GVL
Sbjct: 4 PIVAIVGRPNVGKSTFFNRLIGERRAIVEDLPGTTRDRLYGDTFWNGREFTVVDTAGVL- 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
PN+ EA +AR QA AI E+ IIF+VDG+
Sbjct: 63 FGGEDPNLP-------------------EAEIARRTRA---QAEHAIAEADAIIFIVDGR 100
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLTAAD ++AD LR K ++LAVNKC+S + ++ EF++L P+P+SA G
Sbjct: 101 DGLTAADSDVADVLRTT--SKPVVLAVNKCDSQER-MLDAVEFYALNLGEPIPMSAFHGL 157
Query: 343 GTGELLDLVCSEL 355
GTG++LD + L
Sbjct: 158 GTGDVLDRLTEYL 170
Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 94/207 (45%), Gaps = 40/207 (19%)
Query: 152 KTTIGNVPEHLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEH 211
KT HL R+AIVGRPNVGKS+L NRL+G R++V PG TRD + +
Sbjct: 173 KTFTQEEERHL--RIAIVGRPNVGKSSLLNRLLGQERSVVSSIPGTTRDPIDTTITYHGE 230
Query: 212 EFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIE 271
L+DT G+ K + I E ++ T+ AIE
Sbjct: 231 PITLIDTAGIRRAGKIERGI-EKYSVLRTL--------------------------RAIE 263
Query: 272 ESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIM-------QVS 324
V + L+D G+TA D IA + + K +IL VNK ++ K QV
Sbjct: 264 RCDVALLLIDATEGVTAQDTHIAGMVVE--AKKGLILVVNKWDAIEKDSHTYYAFQDQVR 321
Query: 325 E-FWSLGFSPLP-ISAISGTGTGELLD 349
E F + ++P+ +SA++G LLD
Sbjct: 322 EAFKFVDYAPIVFVSALTGQRVSHLLD 348
>sp|A3PBA9|DER_PROM0 GTPase Der OS=Prochlorococcus marinus (strain MIT 9301) GN=der PE=3
SV=1
Length = 457
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/195 (45%), Positives = 111/195 (56%), Gaps = 32/195 (16%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP +AI+GRPNVGKS L NRL N AIV D+PGVTRDR Y + WG EF +VDTGG+
Sbjct: 2 ILPTIAIIGRPNVGKSTLVNRLCQSNDAIVFDKPGVTRDRTYQNASWGGKEFQIVDTGGL 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ +D + E +P I Q A+EE+ + + +VD
Sbjct: 62 ---------VFDDDS-------EFLP-------------EIRTQVFLALEEASLALLVVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G G+T D IA WLR + I+AVNKCES GI SEFW LG P P+SAI
Sbjct: 93 GNQGVTDGDLSIAKWLRNSSCK--TIVAVNKCESTTLGISLASEFWKLGLGEPNPVSAIH 150
Query: 341 GTGTGELLDLVCSEL 355
G+GTG+LLDLV EL
Sbjct: 151 GSGTGDLLDLVIGEL 165
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 44/202 (21%)
Query: 155 IGNVPEHLLP------RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFW 208
IG +PE+ + ++I+GRPNVGKS+L N + G RAIV D G T D +
Sbjct: 162 IGELPENNIQDDEEKIMMSIIGRPNVGKSSLLNSICGEKRAIVSDISGTTTDSIDTLIKK 221
Query: 209 GEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATA 268
G++ + ++DT G+ + + N + T + R A
Sbjct: 222 GDNHWKIIDTAGI----RRKKN---------------VKYGTEFFGINR--------AFK 254
Query: 269 AIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKG---IMQV-- 323
+I+ S V + ++D G+T D+++A R + I+ VNK + K I QV
Sbjct: 255 SIDRSDVCVLVIDAIDGVTDQDQKLAG--RIEEQGRACIIVVNKWDLVEKNSSTIYQVEK 312
Query: 324 ---SEFWSLGFSPLP-ISAISG 341
S+ + L +S + ISA++G
Sbjct: 313 ELRSKLYFLHWSKMIFISALTG 334
>sp|A8G3A3|DER_PROM2 GTPase Der OS=Prochlorococcus marinus (strain MIT 9215) GN=der PE=3
SV=1
Length = 457
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/195 (45%), Positives = 111/195 (56%), Gaps = 32/195 (16%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+LP +AI+GRPNVGKS L NRL N AIV D+PGVTRDR Y + WG EF +VDTGG+
Sbjct: 2 ILPTIAIIGRPNVGKSTLVNRLCQSNDAIVFDKPGVTRDRTYQNASWGGKEFQIVDTGGL 61
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
+ +D + E +P I Q A+EE+ + + +VD
Sbjct: 62 ---------VFDDDS-------EFLP-------------EIRTQVFLALEEASLALLVVD 92
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G G+T D IA WLR + I+AVNKCES GI SEFW LG P P+SAI
Sbjct: 93 GNQGVTDGDLSIAKWLRNSSCK--TIVAVNKCESTTLGISLASEFWKLGLGEPNPVSAIH 150
Query: 341 GTGTGELLDLVCSEL 355
G+GTG+LLDLV EL
Sbjct: 151 GSGTGDLLDLVIGEL 165
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 44/202 (21%)
Query: 155 IGNVPEHLLP------RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFW 208
IG +PE+ + ++I+GRPNVGKS+L N + G RAIV D G T D +
Sbjct: 162 IGELPENNIRDDEEKIMMSIIGRPNVGKSSLLNSICGEKRAIVSDISGTTTDSIDTLIKK 221
Query: 209 GEHEFMLVDTGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATA 268
G++ + ++DT G+ + + N + T + R A
Sbjct: 222 GDNYWKIIDTAGI----RRKKN---------------VKYGTEFFGINR--------AFK 254
Query: 269 AIEESCVIIFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKG---IMQV-- 323
+I+ S V + ++D G+T D+++A R + I+ VNK + K I QV
Sbjct: 255 SIDRSDVCVLVIDAVDGVTDQDQKLAG--RIEEQGRACIIVVNKWDLVEKNSSTIYQVEK 312
Query: 324 ---SEFWSLGFSPLP-ISAISG 341
S+ + L +S + ISA++G
Sbjct: 313 ELRSKLYFLHWSKMIFISALTG 334
>sp|Q7V2S6|DER_PROMP GTPase Der OS=Prochlorococcus marinus subsp. pastoris (strain
CCMP1986 / MED4) GN=der PE=3 SV=1
Length = 458
Score = 149 bits (375), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 87/190 (45%), Positives = 108/190 (56%), Gaps = 32/190 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP +AI+GRPNVGKS L NRL N AIV D+PGVTRDR Y + W EF +VDTGG+
Sbjct: 3 LPSIAIIGRPNVGKSTLVNRLCQSNDAIVFDKPGVTRDRTYQNASWAGREFQVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ ED + E +P I Q A+EE+ + +F+VDG
Sbjct: 62 --------VFEDDS-------EFLP-------------EIRTQVFLALEEASLALFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
G+T D IA WLR + I+AVNKCES G+ SEFW LG P P+SAI G
Sbjct: 94 NQGVTDGDLSIAKWLRNSACK--TIVAVNKCESTSLGVSLASEFWKLGLGEPYPVSAIHG 151
Query: 342 TGTGELLDLV 351
+GTG+LLDLV
Sbjct: 152 SGTGDLLDLV 161
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 83/185 (44%), Gaps = 38/185 (20%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
++I+GRPNVGKS+L N + G RAIV D G T D + H + +VDT G+
Sbjct: 180 MSIIGRPNVGKSSLLNAICGEKRAIVSDISGTTTDSIDTLIKKDSHLWKIVDTAGI---- 235
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+ + N + T + R A +I+ S V + ++D G
Sbjct: 236 RRKKN---------------VKYGTEFFGINR--------AFKSIDRSDVCVLVIDAIDG 272
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNK---CESPRKGIMQV-----SEFWSLGFSPLP-I 336
+T D+++A R + ++ VNK E I QV S+ + L +S + I
Sbjct: 273 VTDQDQKLAG--RIEEQGRACVIVVNKWDLVEKNNSTIYQVEKELRSKLYFLHWSKMIFI 330
Query: 337 SAISG 341
SA++G
Sbjct: 331 SALTG 335
>sp|B8GAY7|DER_CHLAD GTPase Der OS=Chloroflexus aggregans (strain MD-66 / DSM 9485)
GN=der PE=3 SV=1
Length = 449
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/187 (46%), Positives = 111/187 (59%), Gaps = 27/187 (14%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS FNRL+G RAIV D PG TRDR+YG +FW EF +VDT G+L
Sbjct: 4 PIVAIVGRPNVGKSTFFNRLIGERRAIVEDIPGTTRDRLYGDTFWNGREFTVVDTAGLL- 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
G E L E +AR + QA AI E+ IIF+VDG+
Sbjct: 63 -----------------FGDEDPSLP--EVEIARRTRV---QAEHAIAEADAIIFMVDGR 100
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT AD ++AD LR K ++LAVNKC+S + ++ EF++L P+P+SA G
Sbjct: 101 DGLTTADADVADILRTT--AKPVVLAVNKCDSQER-MLDAVEFYALNLGDPIPMSAFHGL 157
Query: 343 GTGELLD 349
GTG++LD
Sbjct: 158 GTGDVLD 164
Score = 75.1 bits (183), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 92/195 (47%), Gaps = 40/195 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRM-YGRSFWGEHEFMLVDTGGVLN 223
RVAIVGRPNVGKS+L NRL+G R++V PG TRD + +++GE L+DT G+
Sbjct: 184 RVAIVGRPNVGKSSLLNRLLGKERSVVSPIPGTTRDPIDTTITYYGE-PITLIDTAGIRR 242
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K + I E ++ T+ AIE V + LVD
Sbjct: 243 AGKIERGI-EKYSVLRTL--------------------------RAIERCDVAMLLVDAT 275
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS--------LGFSPLP 335
G+TA D IA + + K +IL VNK ++ K EF + ++P+
Sbjct: 276 EGVTAQDTHIAGMVIE--AKKGLILVVNKWDAITKDSQTYYEFEHRVREAFKFVDYAPIV 333
Query: 336 -ISAISGTGTGELLD 349
ISA++G LLD
Sbjct: 334 FISALTGQRVSHLLD 348
>sp|Q7NGF9|DER_GLOVI GTPase Der OS=Gloeobacter violaceus (strain PCC 7421) GN=der PE=3
SV=1
Length = 455
Score = 142 bits (358), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 81/196 (41%), Positives = 111/196 (56%), Gaps = 32/196 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAI+GRPNVGKS L NRL GG+ AIV D+PGVTRDR+Y + W + F +VDTGG+
Sbjct: 3 LPIVAIIGRPNVGKSTLLNRLAGGSEAIVYDQPGVTRDRLYLPAEWCGYRFEVVDTGGL- 61
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
+ ED + +PL I Q A+ E+ ++F+VDG
Sbjct: 62 --------VFEDSEVF-------LPL-------------IREQVEIALAEAAAVLFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
Q G+T D E+ADWLR +++ NK E P + +EF++LG P +SAI G
Sbjct: 94 QQGITGGDREVADWLRGR--KPPVLIVANKLEEPSTALSLAAEFYALGLGEPYAVSAIHG 151
Query: 342 TGTGELLDLVCSELKK 357
+GTG+LLD + + L K
Sbjct: 152 SGTGDLLDALVAVLPK 167
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 160 EHLLP--RVAIVGRPNVGKSALFNRLVGGN--RAIVVDEPGVTRDRMYGRSFWGEHEFML 215
E LP RV+IVGRPNVGKS+L N LVGG R++V + G TRD + GE + L
Sbjct: 172 EQELPELRVSIVGRPNVGKSSLLNALVGGEHPRSMVSEVAGTTRDAIDTLVEHGERRYRL 231
Query: 216 VDTGGVLNVSK 226
+DT G+ S+
Sbjct: 232 IDTAGIRRKSR 242
>sp|A9B567|DER_HERA2 GTPase Der OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM
785) GN=der PE=3 SV=1
Length = 455
Score = 139 bits (351), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/193 (43%), Positives = 113/193 (58%), Gaps = 27/193 (13%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L+G RAI+ DE G TRDR YG + W F +VDT G+L
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLIGERRAIIADEAGTTRDRQYGETIWNGRVFTIVDTAGLL- 62
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
V PN +PL A + +QA AI+E+ VI+F+VD +
Sbjct: 63 VGDDDPN---------------LPL-------AEIVRRTHQQAQLAIDEADVIVFMVDVR 100
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GL AADEE+A LR++ K ++L VNK ++ + V EF++LG P+ +SA GT
Sbjct: 101 EGLIAADEEVAALLRRS--SKPVVLGVNKADTEDRRQNAV-EFYNLGLGDPIALSAYHGT 157
Query: 343 GTGELLDLVCSEL 355
G+G+LLD + L
Sbjct: 158 GSGDLLDEIVRHL 170
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 89/197 (45%), Gaps = 42/197 (21%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++AIVGRPNVGKS+L N+LVG R +V + PG TRD + + + L+DT G+
Sbjct: 184 KIAIVGRPNVGKSSLLNKLVGEERVVVSNIPGTTRDSIDTKLTYKGIPITLIDTAGIRRR 243
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ I E ++ T+ AIE + + LVD Q
Sbjct: 244 GSIEQGI-ERYSVLRTM--------------------------KAIERCHIALILVDAQE 276
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNK----------CESPRKGIMQVSEFWSLGFSPL 334
G TA D +A + + +K + + VNK E + + QV F ++P+
Sbjct: 277 GPTAQDTHVAGMVLE--ANKGLAIIVNKWDLIDKAKFSYEDAKTTMSQVFHFAP--YAPI 332
Query: 335 P-ISAISGTGTGELLDL 350
ISA +G ++LD+
Sbjct: 333 EFISAKTGQRATKVLDI 349
>sp|A4XHX9|DER_CALS8 GTPase Der OS=Caldicellulosiruptor saccharolyticus (strain ATCC
43494 / DSM 8903) GN=der PE=3 SV=2
Length = 439
Score = 139 bits (350), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/200 (43%), Positives = 117/200 (58%), Gaps = 33/200 (16%)
Query: 162 LLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGV 221
+ P VAIVGRPNVGKS LFNRL+G RAIV D PG+TRDR+ G + W F ++DTGG+
Sbjct: 1 MKPTVAIVGRPNVGKSTLFNRLIGERRAIVDDTPGITRDRIVGETEWRGITFNVIDTGGI 60
Query: 222 LNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVD 281
S ED+ + + RQA AI+ S VIIF+VD
Sbjct: 61 EPYS-------EDIIL----------------------KQMRRQAQFAIDMSDVIIFMVD 91
Query: 282 GQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAIS 340
G+ GLT AD E+A+ LR + K I+LAVNK ++ + + + EF+ LG S P+P+SA
Sbjct: 92 GKTGLTDADREVANMLRVS--KKPIVLAVNKIDNISEQPI-IYEFYELGLSDPIPMSAEH 148
Query: 341 GTGTGELLDLVCSELKKVEV 360
G+G G++LD V S KV +
Sbjct: 149 GSGVGDVLDAVVSYFDKVGI 168
Score = 65.5 bits (158), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 90/205 (43%), Gaps = 54/205 (26%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+VAI+G+PN GKS+L N ++G R IV D PG TRD
Sbjct: 177 KVAIIGKPNTGKSSLVNYILGEERVIVSDIPGTTRD------------------------ 212
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSM----IER----QATAAIEESCVI 276
AI + + EGIPL + A R S IER + +AIE S +
Sbjct: 213 -----------AIDSYVEFEGIPLTLIDTAGLRRKSKIYDNIERYSMLRTISAIERSDIC 261
Query: 277 IFLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS-------- 328
+ L+DG ++ D +IA + + K I+AVNK ++ K E+
Sbjct: 262 VILLDGTEPVSEQDAKIAGYAYE--AGKGCIIAVNKWDAVEKDEKTADEYKKQIEEKLSF 319
Query: 329 LGFSP-LPISAISGTGTGELLDLVC 352
L F+P L ISA +G +LL+ V
Sbjct: 320 LKFAPVLFISAKTGFRVKKLLETVL 344
>sp|Q2JM09|DER_SYNJB GTPase Der OS=Synechococcus sp. (strain JA-2-3B'a(2-13)) GN=der
PE=3 SV=1
Length = 459
Score = 139 bits (349), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 88/197 (44%), Positives = 112/197 (56%), Gaps = 32/197 (16%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS L NR+ G AIV DEPGVTRDR+Y W +VDTGG++
Sbjct: 3 LPLVAIVGRPNVGKSTLVNRMAGVRSAIVHDEPGVTRDRLYQEVEWNGRRLRVVDTGGLV 62
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
S E +P I +QA AA+ E+ +IF+VDG
Sbjct: 63 FGDDS----------------EFLP-------------HIRQQAMAAMAEAQAVIFVVDG 93
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ GLT AD E+ADWLRK + +++AVNKCES + G+ Q + FW LG P+P S I G
Sbjct: 94 REGLTPADVEVADWLRKQPLP--VVVAVNKCESGQMGLAQAAAFWELGLGDPIPCSGIHG 151
Query: 342 TGTGELLDLVCSELKKV 358
G ELL+ V + L +V
Sbjct: 152 NGVAELLEAVLAHLPEV 168
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 43/211 (20%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
V+IVGRPNVGKS+L NRLVG RAIV G TRD + W + L+DT G+ +
Sbjct: 181 VSIVGRPNVGKSSLLNRLVGSERAIVSPISGTTRDAIDTVVTWEGQPYRLIDTAGIRKKN 240
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+ Q I E +I +A AI+ S ++ ++D G
Sbjct: 241 RVQYGI-EFFSIN--------------------------RAFKAIQRSDAVLLVIDALEG 273
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCES-PRKGIMQVSEF--------WSLGFSPLP- 335
+T D+ +A R + ++ VNK ++ K ++EF + + ++PL
Sbjct: 274 VTEQDQRLAG--RIEEEGRACVVVVNKWDAVENKDTHTINEFTREIRDRLYFIEWAPLLF 331
Query: 336 ISAISGTGTGELLD----LVCSELKKVEVCI 362
+SA++G T ++ + +V + K+V +
Sbjct: 332 VSALTGQRTHKIFEQVNTVVAAHRKRVPTAV 362
>sp|A5N7W7|DER_CLOK5 GTPase Der OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 /
NCIMB 10680) GN=der PE=3 SV=1
Length = 438
Score = 136 bits (342), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/194 (41%), Positives = 113/194 (58%), Gaps = 33/194 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L G +IV D PGVTRDR+Y ++ W + F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAGKRISIVEDTPGVTRDRVYAQAEWLNYNFTIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P + +++M RQA AIE + VIIF+VDG+
Sbjct: 62 ----EPE-------------------NNDVIISKM----RRQAQVAIETANVIIFIVDGR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLTAAD+E+A LRK+ K I+L VNK ++ ++ + EF++LG P+ ISA G
Sbjct: 95 EGLTAADKEVAQMLRKS--KKPIVLVVNKIDNMKQE-NYIYEFYNLGIGEPISISASQGL 151
Query: 343 GTGELLDLVCSELK 356
G G++LD + K
Sbjct: 152 GLGDMLDKLVENFK 165
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 45/208 (21%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++A +G+PNVGKS+L N+L+G R IV D PG TRD + E +F+L+DT GV
Sbjct: 178 KIAFIGKPNVGKSSLINKLLGEERVIVSDIPGTTRDAIDSYLETDEGKFLLIDTAGVRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK + I + I T A+E + V I ++D
Sbjct: 238 SKVKEEIEKYSVIRT---------------------------YTAVERADVCILMLDATH 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS--------LGFSP-LP 335
++ DE+I + + ++K I++ +NK + K V+++ + + ++P L
Sbjct: 271 DISEQDEKIIGYAHE--LNKAIMVVINKWDLVDKDTKTVNKYKTSIGSSLSFMSYAPYLF 328
Query: 336 ISAISGTGTGELLDLV-------CSELK 356
ISA +G + +V C ++K
Sbjct: 329 ISAKTGQRVNRIFKMVRECYDNYCKQIK 356
>sp|B9E1C8|DER_CLOK1 GTPase Der OS=Clostridium kluyveri (strain NBRC 12016) GN=der PE=3
SV=1
Length = 438
Score = 136 bits (342), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/194 (41%), Positives = 113/194 (58%), Gaps = 33/194 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L G +IV D PGVTRDR+Y ++ W + F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAGKRISIVEDTPGVTRDRVYAQAEWLNYNFTIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P + +++M RQA AIE + VIIF+VDG+
Sbjct: 62 ----EPE-------------------NNDVIISKM----RRQAQVAIETANVIIFIVDGR 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLTAAD+E+A LRK+ K I+L VNK ++ ++ + EF++LG P+ ISA G
Sbjct: 95 EGLTAADKEVAQMLRKS--KKPIVLVVNKIDNMKQE-NYIYEFYNLGIGEPISISASQGL 151
Query: 343 GTGELLDLVCSELK 356
G G++LD + K
Sbjct: 152 GLGDMLDKLVENFK 165
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 45/208 (21%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++A +G+PNVGKS+L N+L+G R IV D PG TRD + E +F+L+DT GV
Sbjct: 178 KIAFIGKPNVGKSSLINKLLGEERVIVSDIPGTTRDAIDSYLETDEGKFLLIDTAGVRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK + I + I T A+E + V I ++D
Sbjct: 238 SKVKEEIEKYSVIRT---------------------------YTAVERADVCILMLDATH 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS--------LGFSP-LP 335
++ DE+I + + ++K I++ +NK + K V+++ + + ++P L
Sbjct: 271 DISEQDEKIIGYAHE--LNKAIMVVINKWDLVDKDTKTVNKYKTSIGSSLSFMSYAPYLF 328
Query: 336 ISAISGTGTGELLDLV-------CSELK 356
ISA +G + +V C ++K
Sbjct: 329 ISAKTGQRVNRIFKMVRECYDNYCKQIK 356
>sp|Q49XS9|DER_STAS1 GTPase Der OS=Staphylococcus saprophyticus subsp. saprophyticus
(strain ATCC 15305 / DSM 20229) GN=der PE=3 SV=1
Length = 436
Score = 135 bits (341), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 82/197 (41%), Positives = 109/197 (55%), Gaps = 34/197 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y W H+F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTIFNRVVGERVSIVEDTPGVTRDRIYSSGEWLTHDFNIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I QA AI+E+ VIIF+V+ +
Sbjct: 62 ----------------------------EIGDAPFQTQIRAQAEVAIDEADVIIFMVNVR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT +DE +A L K+ K ++LAVNK ++P ++ +F+SLGF P PIS G
Sbjct: 94 EGLTQSDEMVAQMLYKS--KKPVVLAVNKVDNPEMR-NEIYDFYSLGFGDPYPISGSHGL 150
Query: 343 GTGELLDLVCSELKKVE 359
G G+LLD V K+ E
Sbjct: 151 GLGDLLDAVVKHFKEEE 167
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R++I+GRPNVGKS+L N ++G +R IV + G TRD + + + +++L+DT G+
Sbjct: 177 RLSIIGRPNVGKSSLVNAILGEDRVIVSNVAGTTRDAVDTEYSYDDQDYVLIDTAGMRKK 236
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K N T + +V R A AIE S VI+ ++D +
Sbjct: 237 GKVYEN-------------------TEKYSVLR--------ALKAIERSNVILIVIDAEQ 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ +A + + K I++ VNK ++ K + +F
Sbjct: 270 GIIEQDKRVAGYAHEE--GKAIVIVVNKWDTVDKETNTMKKF 309
>sp|Q03SA1|DER_LACBA GTPase Der OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170)
GN=der PE=3 SV=1
Length = 435
Score = 135 bits (339), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 85/195 (43%), Positives = 110/195 (56%), Gaps = 38/195 (19%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNR+ G +IV D PGVTRDR+Y R+ W EF ++DTGG
Sbjct: 4 PVVAIVGRPNVGKSTLFNRIAGERISIVEDTPGVTRDRIYSRAEWLGTEFRMIDTGG--- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
I M P T+ I +QA AI+E+ VI+F+V
Sbjct: 61 -----------------IDMGDEPFLTQ----------ITQQAEIAIDEADVIVFIVSAP 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESP--RKGIMQVSEFWSLGFS-PLPISAIS 340
G+T ADE++A L + DK +ILAVNK ++P R+ I +F+SLGF P P+S +
Sbjct: 94 EGITDADEKVAKILYR--ADKPVILAVNKADNPEVRESIY---DFYSLGFGDPYPVSGVH 148
Query: 341 GTGTGELLDLVCSEL 355
G G G+LLD V E
Sbjct: 149 GLGLGDLLDAVVKEF 163
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 96/200 (48%), Gaps = 36/200 (18%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R +++GRPNVGKS+L N ++G R IV + G TRD + + + +F +VDT G+
Sbjct: 176 RFSLIGRPNVGKSSLVNAMLGEERVIVSNIAGTTRDAIDTKFVADDTKFTMVDTAGIRKR 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K N T +V R A AI++S V++ +++ +
Sbjct: 236 GKVYEN-------------------TERYSVMR--------AMRAIDDSDVVLVVLNAEE 268
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSL------GFSPLPISA 338
G+ D+ +A + + + II+ VNK ++ +K +++F +L S PI
Sbjct: 269 GIREQDKRVAGYAHE--AGRGIIILVNKWDTLKKDNHTLTDFQNLIRIEFQYLSYAPIIF 326
Query: 339 ISGTGTGELLDLVCSELKKV 358
+S TG+ L+ + +K+V
Sbjct: 327 VSAK-TGQRLEQLPEMIKRV 345
>sp|Q3JCW1|DER_NITOC GTPase Der OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB
11848) GN=der PE=3 SV=1
Length = 464
Score = 135 bits (339), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 82/182 (45%), Positives = 103/182 (56%), Gaps = 34/182 (18%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VA+VGRPNVGKS LFNRL A+VVD+PGVTRDR YG + +GE F +VDTGGV+
Sbjct: 5 VALVGRPNVGKSTLFNRLTRSRDALVVDQPGVTRDRKYGLAHYGEQSFFVVDTGGVME-- 62
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+E+ + R ++ QA AIEE+ VI FLVDG+ G
Sbjct: 63 -------------------------QESGIGR---LMRAQAQLAIEEADVIFFLVDGREG 94
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGTGT 344
L++ DEEIA WLR K + L +NK E R G + SEF+ LG P+ ISA G G
Sbjct: 95 LSSLDEEIAAWLR--CAQKPLKLVINKAEG-RDGDLVASEFYRLGLGEPIIISAQQGQGV 151
Query: 345 GE 346
G
Sbjct: 152 GR 153
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 89/199 (44%), Gaps = 56/199 (28%)
Query: 167 AIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRD------RMYGRSFWGEHEFMLVDTGG 220
A++GRPNVGKS L NR++G R + + PG TRD R +G+ ++ LVDT G
Sbjct: 180 AVIGRPNVGKSTLVNRILGEERVLSSEIPGTTRDSISIPFRHHGK------DYTLVDTAG 233
Query: 221 VLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLV 280
+ + + I++ + + I Q+ +I + V+I ++
Sbjct: 234 I----RRRSRILDKVEKFSVI-----------------------QSLQSIAIAQVVILVI 266
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCES-PRKGIMQVSE----------FWSL 329
D + D +A + ++ K +++AVNK + P + +V F +
Sbjct: 267 DAHDSVVEQDLHLAGVILES--GKGVVIAVNKWDGLPLEQRQRVKTDLDRRLPFLVFARI 324
Query: 330 GFSPLPISAISGTGTGELL 348
F ISA+ G+G G+L
Sbjct: 325 HF----ISALHGSGVGDLF 339
>sp|B9DNV9|DER_STACT GTPase Der OS=Staphylococcus carnosus (strain TM300) GN=der PE=3
SV=1
Length = 436
Score = 134 bits (338), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 81/194 (41%), Positives = 106/194 (54%), Gaps = 34/194 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS +FNR+VG +IV D PGVTRDR+Y W H+F ++DTGG+
Sbjct: 4 PVVAIVGRPNVGKSTIFNRIVGERVSIVEDTPGVTRDRIYSSGEWLTHDFNVIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
E A + I QA AI+E+ VIIF+V+ +
Sbjct: 62 ----------------------------ELTDAPFQTQIRAQAEIAIDEADVIIFMVNQR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT DE IA L K +K ++LAVNK ++P + +F++LGF P PIS G
Sbjct: 94 EGLTQTDEMIAQMLYKT--NKPVVLAVNKVDNPEMR-TDIYDFYALGFGEPFPISGSHGL 150
Query: 343 GTGELLDLVCSELK 356
G G+LLD V + K
Sbjct: 151 GLGDLLDEVANNFK 164
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 83/162 (51%), Gaps = 29/162 (17%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
+++++GRPNVGKS+L N ++G +R IV + G TRD + + + +++L+DT G+
Sbjct: 177 KLSLIGRPNVGKSSLVNAILGEDRVIVSNIAGTTRDAIDTEYSYEDQDYVLIDTAGM--- 233
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
+ + + E +T + +V R A AIE S V++ ++D +
Sbjct: 234 -RKKGKVYE---------------STEKYSVLR--------ALKAIERSNVVLVVLDAEE 269
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF 326
G+ D+ +A + + K +++ VNK ++ K + +F
Sbjct: 270 GIIEQDKRVAGYAHEE--GKAVVIVVNKWDTLDKDSKTMKKF 309
>sp|Q67NS9|DER_SYMTH GTPase Der OS=Symbiobacterium thermophilum (strain T / IAM 14863)
GN=der PE=3 SV=1
Length = 471
Score = 134 bits (336), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/193 (46%), Positives = 109/193 (56%), Gaps = 32/193 (16%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNRL AIV D+PGVTRDR+Y + W LVDTGG+
Sbjct: 3 PIVAIVGRPNVGKSTLFNRLTQSRHAIVEDQPGVTRDRLYADTEWNGRTLTLVDTGGI-- 60
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ EG T EA V RQA AI E+ VIIF+VD
Sbjct: 61 ----------------QLDKEG---DTIEAHVT-------RQAELAIREADVIIFVVDVT 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSPL-PISAISGT 342
G+TA D E+AD LR+ K +I+AVNK E+ ++ + EFW+LG PL +SA G
Sbjct: 95 DGVTAPDLEVADLLRRQR--KPVIVAVNKVENLKRE-DEALEFWALGLEPLINVSAEHGL 151
Query: 343 GTGELLDLVCSEL 355
GTG+LLD V + L
Sbjct: 152 GTGDLLDAVVAAL 164
Score = 79.0 bits (193), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 80/157 (50%), Gaps = 30/157 (19%)
Query: 159 PEHLLP-RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVD 217
PE P RVA++GRPNVGKS+L N ++G R IV D PG TRD + GE +F+L+D
Sbjct: 172 PEEGGPVRVAVIGRPNVGKSSLVNAILGEERVIVSDVPGTTRDAIDVLVERGEDKFLLID 231
Query: 218 TGGVLNVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVII 277
T G+ ++ E AV R M +A A+E + V++
Sbjct: 232 TAGMRRKARV------------------------EEAVERYSVM---RALRAVERAQVVL 264
Query: 278 FLVDGQAGLTAADEEIADWLRKNYMDKFIILAVNKCE 314
++D Q G+T D+ IA + +N K I+ VNK +
Sbjct: 265 IVIDAQDGVTEQDQRIAGYAHEN--GKACIVVVNKWD 299
>sp|A0Q125|DER_CLONN GTPase Der OS=Clostridium novyi (strain NT) GN=der PE=3 SV=1
Length = 438
Score = 134 bits (336), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/193 (44%), Positives = 110/193 (56%), Gaps = 33/193 (17%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFN+L G AIV D PGVTRDR+Y + W + F ++DTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAGKRIAIVDDMPGVTRDRIYAEAEWLNNNFTIIDTGGI-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+P + VA+M RQA AIE + V++F+VDG+
Sbjct: 62 ----EPE-------------------NDDIIVAQM----RRQAQLAIEMADVVLFIVDGK 94
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLT AD E+A LRK K I+LAVNK + R+ + EF++LG P+PISA G
Sbjct: 95 QGLTDADREVAHMLRK--ASKSIVLAVNKIDR-RQLDDNIYEFYNLGLGDPMPISASQGL 151
Query: 343 GTGELLDLVCSEL 355
G G+LLD V +
Sbjct: 152 GLGDLLDEVIEKF 164
Score = 65.1 bits (157), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 91/195 (46%), Gaps = 38/195 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R+A++GRPNVGKS+L N+++G + IV + PG TRD + E +F+L+DT G+
Sbjct: 178 RIAMIGRPNVGKSSLINKILGEEKHIVSNIPGTTRDAVDSYVETEEGKFVLIDTAGLRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
SK + + R +AV + A+IE + V I ++D
Sbjct: 238 SKIKEQV------------------ERYSAV---------RTLASIENADVCILMIDATE 270
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEF-----WSLGFSP----LP 335
+ DE I + + ++K I++ VNK + K + F L F P L
Sbjct: 271 DIAEQDERIIGYAHE--INKAILVIVNKWDLIEKDDKTMKNFKDKLRTKLSFLPYASFLF 328
Query: 336 ISAISGTGTGELLDL 350
ISA +G ++L +
Sbjct: 329 ISAKTGQRVHKVLGM 343
>sp|Q9CHH6|DER_LACLA GTPase Der OS=Lactococcus lactis subsp. lactis (strain IL1403)
GN=der PE=3 SV=1
Length = 436
Score = 134 bits (336), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 109/194 (56%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y W +F ++DTGG
Sbjct: 3 LPTVAIVGRPNVGKSTIFNRIAGERISIVEDIPGVTRDRIYATGEWLTRKFNIIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I + P T I QA A+ E+ VII +VDG
Sbjct: 61 ------------------IELSDEPFMTE----------IRAQAEIAMTEADVIIAVVDG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A+ L + DK +IL VNK ++P + M++ +F+SLG P P+SA+ G
Sbjct: 93 ETGITDADEAVANILYRT--DKPVILVVNKVDNPERR-MEIFDFYSLGLGDPYPVSAVHG 149
Query: 342 TGTGELLDLVCSEL 355
GTG++LD + L
Sbjct: 150 IGTGDVLDAIVQNL 163
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 91/197 (46%), Gaps = 39/197 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + E EF+++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPIAGTTRDAIDTHFVDSEDQEFVMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S +++ +++ +
Sbjct: 236 SGKIYEN-------------------TEKYSVMR--------AMRAIDRSDIVLMVINAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKG--------IMQVSEFWSLGFSPLP 335
G+ D IA + + K I++ VNK ++ K + ++F L ++P+
Sbjct: 269 EGIREYDMRIAGFAHE--AGKGILIVVNKWDTLEKDNDTMKNFELEIRTKFKFLDYAPIV 326
Query: 336 -ISAISGTGTGELLDLV 351
+SA +G +L D++
Sbjct: 327 YVSAKTGQRLNKLPDMI 343
>sp|Q030L6|DER_LACLS GTPase Der OS=Lactococcus lactis subsp. cremoris (strain SK11)
GN=der PE=3 SV=1
Length = 436
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 109/194 (56%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y W +F ++DTGG
Sbjct: 3 LPTVAIVGRPNVGKSTIFNRIAGERISIVEDIPGVTRDRIYATGEWLTRKFNIIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I + P T I QA A+ E+ VII +VDG
Sbjct: 61 ------------------IELSDEPFMTE----------IRAQAEIAMTEADVIIAVVDG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A+ L + DK +IL VNK ++P + M++ +F+SLG P P+SA+ G
Sbjct: 93 ETGITDADEAVANILYRT--DKPVILIVNKVDNPERR-MEIFDFYSLGLGDPYPVSAVHG 149
Query: 342 TGTGELLDLVCSEL 355
GTG++LD + L
Sbjct: 150 IGTGDVLDAIVQNL 163
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 94/197 (47%), Gaps = 39/197 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + E EF+++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPIAGTTRDAIDTHFVDSEDQEFVMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S +++ +++ +
Sbjct: 236 SGKIYEN-------------------TEKYSVMR--------AMRAIDRSDIVLMVINAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKC-------ESPRKGIMQV-SEFWSLGFSPLP 335
G+ D IA + + K I++ VNK ++ +K +++ ++F L ++P+
Sbjct: 269 EGIREYDMRIAGFAHE--AGKGILIVVNKWDTLEKDNDTMKKFELEIRTKFKFLDYAPIV 326
Query: 336 -ISAISGTGTGELLDLV 351
+SA +G +L D++
Sbjct: 327 YVSAKTGQRLNKLPDMI 343
>sp|A2RM49|DER_LACLM GTPase Der OS=Lactococcus lactis subsp. cremoris (strain MG1363)
GN=der PE=3 SV=1
Length = 436
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 109/194 (56%), Gaps = 34/194 (17%)
Query: 163 LPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVL 222
LP VAIVGRPNVGKS +FNR+ G +IV D PGVTRDR+Y W +F ++DTGG
Sbjct: 3 LPTVAIVGRPNVGKSTIFNRIAGERISIVEDIPGVTRDRIYATGEWLTRKFNIIDTGG-- 60
Query: 223 NVSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDG 282
I + P T I QA A+ E+ VII +VDG
Sbjct: 61 ------------------IELSDEPFMTE----------IRAQAEIAMTEADVIIAVVDG 92
Query: 283 QAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISG 341
+ G+T ADE +A+ L + DK +IL VNK ++P + M++ +F+SLG P P+SA+ G
Sbjct: 93 ETGITDADEAVANILYRT--DKPVILIVNKVDNPERR-MEIFDFYSLGLGDPYPVSAVHG 149
Query: 342 TGTGELLDLVCSEL 355
GTG++LD + L
Sbjct: 150 IGTGDVLDAIVQNL 163
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 94/197 (47%), Gaps = 39/197 (19%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGE-HEFMLVDTGGVLN 223
+ +++GRPNVGKS+L N ++G +R I G TRD + E EF+++DT G+
Sbjct: 176 KFSLIGRPNVGKSSLINAILGEDRVIASPIAGTTRDAIDTHFVDSEDQEFVMIDTAGMRK 235
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
K N T + +V R A AI+ S +++ +++ +
Sbjct: 236 SGKIYEN-------------------TEKYSVMR--------AMRAIDRSDIVLMVINAE 268
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKC-------ESPRKGIMQV-SEFWSLGFSPLP 335
G+ D IA + + K I++ VNK ++ +K +++ ++F L ++P+
Sbjct: 269 EGIREYDMRIAGFAHE--AGKGILIVVNKWDTLEKDNDTMKKFELEIRTKFKFLDYAPIV 326
Query: 336 -ISAISGTGTGELLDLV 351
+SA +G +L D++
Sbjct: 327 YVSAKTGQRLNKLPDMI 343
>sp|B0K3E4|DER_THEPX GTPase Der OS=Thermoanaerobacter sp. (strain X514) GN=der PE=3 SV=1
Length = 439
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 116/196 (59%), Gaps = 32/196 (16%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
V+IVGRPNVGKS LFN+++G +IV D+PGVTRDR+YG + W + +F+LVDTGG+
Sbjct: 6 VSIVGRPNVGKSTLFNKIMGKRISIVEDKPGVTRDRIYGNAEWLDKKFILVDTGGL---- 61
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
PN ED+ + S + Q AAI+ S VI+FLVD + G
Sbjct: 62 --DPN-AEDI----------------------LFSKVRLQVEAAIDTSDVILFLVDAKEG 96
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGF-SPLPISAISGTGT 344
L DEEIA+ LR+ K +IL NK +S ++ +F+SLG +P+PISA +G G
Sbjct: 97 LMPEDEEIANILRR--AKKEVILVCNKVDSFKEMPPTYYDFFSLGLGNPIPISASNGLGI 154
Query: 345 GELLDLVCSELKKVEV 360
GELLD V L + E+
Sbjct: 155 GELLDEVVKRLPQEEL 170
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 104/228 (45%), Gaps = 46/228 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
++A++G+PNVGKS+L N+++G R IV + PG TRD + ++L+DT G+
Sbjct: 178 KIAVIGKPNVGKSSLVNKILGEERVIVSNIPGTTRDAIDTPFSKDGKNYVLIDTAGIRRK 237
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIER----QATAAIEESCVIIFLV 280
S R+ IER +A AAIE S + + ++
Sbjct: 238 S-------------------------------RISESIERYSVLRALAAIERSDICLLMI 266
Query: 281 DGQAGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSL--------GFS 332
D G T D +IA + +N K II+ VNK ++ +K V+E+ + F+
Sbjct: 267 DATEGPTEQDTKIAGYAFEN--GKGIIIVVNKWDAIKKDNNTVNEYTKMVREKLSFISFA 324
Query: 333 P-LPISAISGTGTGELLDLVCSELKKVEVCIGFLLICNAITKIFHIIP 379
P L ISA +G +L+ V ++ I L+ N + + + P
Sbjct: 325 PILFISAKTGQRVHRVLETVDKVWEEYNKRITTGLLNNVLNEAILMFP 372
>sp|B2A4M9|DER_NATTJ GTPase Der OS=Natranaerobius thermophilus (strain ATCC BAA-1301 /
DSM 18059 / JW/NM-WN-LF) GN=der PE=3 SV=1
Length = 440
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/195 (42%), Positives = 111/195 (56%), Gaps = 35/195 (17%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
VA+VGRPNVGKSALFNR+VG +IV D PGVTRDR+ G+ W H F L+DTGG+ +
Sbjct: 7 VALVGRPNVGKSALFNRIVGQRISIVDDTPGVTRDRIDGKGEWSGHSFNLIDTGGIFD-- 64
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
+ +I++ + I QA AI+E+ VI+F+ DG+ G
Sbjct: 65 -EEDDILKQVVI---------------------------QAEVAIDEADVIVFVTDGRDG 96
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFSP-LPISAISGTGT 344
+T ADEE+A LRK K +++AVNK E EF+ LGF + ISA+ GT T
Sbjct: 97 ITPADEEVAATLRKT--KKPVLVAVNKSEGNYD--QYAMEFYQLGFEQVISISALHGTNT 152
Query: 345 GELLDLVCSELKKVE 359
G+LLD + L + E
Sbjct: 153 GQLLDEIVELLPEQE 167
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 70/153 (45%), Gaps = 29/153 (18%)
Query: 166 VAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNVS 225
++++GRPNVGKS+L N+++ R IV + PG TRD + + +++ +DT G+ S
Sbjct: 180 LSVIGRPNVGKSSLINKILNKERLIVSNMPGTTRDAIDTVIEREDQKYVFIDTAGLRKKS 239
Query: 226 KSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQAG 285
K + + I + GM E S + + L+D G
Sbjct: 240 KIDERLEKYSVIRSIKGM---------------------------ERSNIALLLIDVTKG 272
Query: 286 LTAADEEIADWLRKNYMDKFIILAVNKCESPRK 318
+ D++IA + K +I+ +NK ++ K
Sbjct: 273 ILEQDKKIAGLAEEK--GKGLIILLNKWDAIEK 303
>sp|A4J3P1|DER_DESRM GTPase Der OS=Desulfotomaculum reducens (strain MI-1) GN=der PE=3
SV=1
Length = 439
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 107/193 (55%), Gaps = 35/193 (18%)
Query: 164 PRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLN 223
P VAIVGRPNVGKS LFNR+VG AIV D PGVTRDR+Y + W EF LVDTGG+
Sbjct: 4 PIVAIVGRPNVGKSTLFNRIVGARIAIVEDMPGVTRDRLYQDAEWQGREFTLVDTGGL-- 61
Query: 224 VSKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQ 283
+ ED+ + + I +QA AI E+ +I+F+VD +
Sbjct: 62 ------DFAEDI----------------------ITAQIRKQAELAIYEADIILFVVDAR 93
Query: 284 AGLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWSLGFS-PLPISAISGT 342
GLTA DEE+ LR+ DK +IL NK E K + +F+ LG P+P+SA G
Sbjct: 94 EGLTAIDEEVGRTLRR--ADKPVILVANKVEHFDK--IPYYDFYQLGLGDPVPVSAAEGL 149
Query: 343 GTGELLDLVCSEL 355
TG+LLD + L
Sbjct: 150 NTGDLLDELVKNL 162
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 87/205 (42%), Gaps = 41/205 (20%)
Query: 165 RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRMYGRSFWGEHEFMLVDTGGVLNV 224
R+A++GRPNVGKS+L N ++G R IV + PG TRD + ++LVDT G+
Sbjct: 176 RIAVIGRPNVGKSSLVNTILGEERVIVSNIPGTTRDAIDSSFEKNGKNYVLVDTAGMRRR 235
Query: 225 SKSQPNIMEDLAITTTIGMEGIPLATREAAVARMPSMIERQATAAIEESCVIIFLVDGQA 284
K I L T +V R A A++ V + + D
Sbjct: 236 KK-------------------IDLPTERYSVVR--------ALRAVDRCDVALMVFDATE 268
Query: 285 GLTAADEEIADWLRKNYMDKFIILAVNKCESPRKGIMQVSEFWS--------LGFSP-LP 335
G+ D+ I + + K IIL +NK + K ++ F L + P L
Sbjct: 269 GIAEQDKRIVGYAHEK--GKAIILIINKWDLIEKDDKTMNRFEKKIREELAFLDYVPTLY 326
Query: 336 ISAISGTGTGELL---DLVCSELKK 357
ISA++ ++L D V E K
Sbjct: 327 ISALTKQRVPKVLETVDFVAEEASK 351
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.134 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 140,954,248
Number of Sequences: 539616
Number of extensions: 6293021
Number of successful extensions: 45073
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1907
Number of HSP's successfully gapped in prelim test: 626
Number of HSP's that attempted gapping in prelim test: 36258
Number of HSP's gapped (non-prelim): 6047
length of query: 381
length of database: 191,569,459
effective HSP length: 119
effective length of query: 262
effective length of database: 127,355,155
effective search space: 33367050610
effective search space used: 33367050610
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)