Query 016885
Match_columns 381
No_of_seqs 450 out of 2096
Neff 10.1
Searched_HMMs 46136
Date Fri Mar 29 03:41:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016885.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016885hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK13604 luxD acyl transferase 100.0 2.8E-29 6E-34 220.2 24.6 235 35-272 7-252 (307)
2 PLN02385 hydrolase; alpha/beta 100.0 2.9E-27 6.2E-32 218.7 23.1 247 35-284 59-347 (349)
3 PLN02298 hydrolase, alpha/beta 100.0 1.5E-27 3.3E-32 219.1 20.8 250 36-289 31-324 (330)
4 PHA02857 monoglyceride lipase; 100.0 4.4E-27 9.4E-32 210.7 22.2 237 42-282 5-273 (276)
5 KOG1455 Lysophospholipase [Lip 100.0 2.3E-27 5.1E-32 202.1 17.7 242 39-282 29-312 (313)
6 KOG1552 Predicted alpha/beta h 100.0 1.1E-26 2.5E-31 194.2 18.7 218 36-285 34-255 (258)
7 PRK10749 lysophospholipase L2; 99.9 5E-25 1.1E-29 202.0 25.6 241 37-282 30-329 (330)
8 PRK05077 frsA fermentation/res 99.9 8.9E-25 1.9E-29 204.6 27.0 232 36-283 167-413 (414)
9 PLN02652 hydrolase; alpha/beta 99.9 4E-25 8.6E-30 205.3 22.7 244 37-284 110-389 (395)
10 COG1647 Esterase/lipase [Gener 99.9 4.7E-26 1E-30 184.8 13.9 213 65-280 14-242 (243)
11 TIGR02240 PHA_depoly_arom poly 99.9 1.4E-24 3.1E-29 194.4 21.0 226 45-282 9-266 (276)
12 PLN02511 hydrolase 99.9 6.9E-24 1.5E-28 197.8 25.4 270 15-287 42-370 (388)
13 PRK00870 haloalkane dehalogena 99.9 5.4E-24 1.2E-28 193.1 21.8 245 31-282 15-301 (302)
14 PRK10566 esterase; Provisional 99.9 1E-23 2.3E-28 185.9 22.3 220 49-283 11-249 (249)
15 KOG4391 Predicted alpha/beta h 99.9 1.1E-24 2.4E-29 175.5 14.2 231 31-285 48-285 (300)
16 COG2267 PldB Lysophospholipase 99.9 9.9E-24 2.2E-28 188.8 20.4 243 38-284 10-296 (298)
17 COG1506 DAP2 Dipeptidyl aminop 99.9 5.1E-24 1.1E-28 209.6 20.3 239 35-285 363-619 (620)
18 TIGR03343 biphenyl_bphD 2-hydr 99.9 4.4E-23 9.6E-28 185.3 23.8 211 65-280 29-281 (282)
19 PRK03592 haloalkane dehalogena 99.9 4.2E-23 9.1E-28 186.7 20.9 226 45-283 14-290 (295)
20 PRK10985 putative hydrolase; P 99.9 2.4E-22 5.1E-27 183.8 25.0 263 16-283 3-321 (324)
21 PLN02824 hydrolase, alpha/beta 99.9 1.8E-22 3.8E-27 182.6 23.5 228 46-282 16-294 (294)
22 TIGR03611 RutD pyrimidine util 99.9 1.2E-22 2.6E-27 179.4 19.9 211 64-280 11-256 (257)
23 PRK06489 hypothetical protein; 99.9 5.2E-22 1.1E-26 184.3 24.2 243 34-283 33-358 (360)
24 PLN02578 hydrolase 99.9 7.4E-22 1.6E-26 182.7 24.5 223 44-280 72-353 (354)
25 TIGR01607 PST-A Plasmodium sub 99.9 1.6E-22 3.4E-27 185.0 19.2 234 42-280 2-331 (332)
26 PRK10673 acyl-CoA esterase; Pr 99.9 1.6E-22 3.5E-27 178.9 18.3 212 63-281 13-254 (255)
27 PLN02965 Probable pheophorbida 99.9 4.5E-22 9.7E-27 176.1 21.0 209 68-281 5-252 (255)
28 TIGR03056 bchO_mg_che_rel puta 99.9 8.9E-22 1.9E-26 176.3 22.9 226 44-280 12-278 (278)
29 PLN03087 BODYGUARD 1 domain co 99.9 2.1E-21 4.6E-26 182.8 25.1 235 41-281 179-478 (481)
30 PLN02679 hydrolase, alpha/beta 99.9 3.3E-21 7.1E-26 178.7 24.8 210 65-281 87-356 (360)
31 PF05448 AXE1: Acetyl xylan es 99.9 2.1E-21 4.5E-26 174.7 22.2 238 35-282 54-320 (320)
32 TIGR03100 hydr1_PEP hydrolase, 99.9 1.2E-21 2.7E-26 174.6 20.4 237 38-280 3-273 (274)
33 PRK10349 carboxylesterase BioH 99.9 1E-21 2.3E-26 173.9 19.3 204 67-280 14-254 (256)
34 TIGR02427 protocat_pcaD 3-oxoa 99.9 1.5E-21 3.2E-26 171.4 18.8 210 65-279 12-250 (251)
35 TIGR01738 bioH putative pimelo 99.9 1.5E-21 3.3E-26 170.7 18.7 204 66-279 4-245 (245)
36 TIGR01250 pro_imino_pep_2 prol 99.9 1.2E-20 2.5E-25 169.4 24.7 228 45-280 9-288 (288)
37 PLN02211 methyl indole-3-aceta 99.9 6.5E-21 1.4E-25 169.8 22.3 216 63-281 15-269 (273)
38 PLN02894 hydrolase, alpha/beta 99.9 2.5E-20 5.4E-25 174.6 27.1 221 64-287 103-390 (402)
39 PRK07581 hypothetical protein; 99.9 1.3E-20 2.8E-25 173.8 24.2 235 46-284 24-338 (339)
40 KOG4409 Predicted hydrolase/ac 99.9 4.4E-21 9.5E-26 167.0 18.9 246 28-281 58-363 (365)
41 PRK03204 haloalkane dehalogena 99.9 1.5E-20 3.2E-25 169.0 23.1 223 45-279 21-285 (286)
42 PF12697 Abhydrolase_6: Alpha/ 99.9 1.7E-21 3.7E-26 168.1 15.6 202 69-273 1-227 (228)
43 TIGR01249 pro_imino_pep_1 prol 99.9 3.7E-20 8.1E-25 168.2 24.7 233 41-283 8-306 (306)
44 TIGR03695 menH_SHCHC 2-succiny 99.9 8E-21 1.7E-25 166.4 19.1 210 66-279 1-250 (251)
45 KOG4178 Soluble epoxide hydrol 99.9 2.4E-20 5.2E-25 162.0 21.4 231 42-282 26-320 (322)
46 PRK14875 acetoin dehydrogenase 99.9 9.4E-21 2E-25 177.1 20.0 210 64-281 129-370 (371)
47 PLN03084 alpha/beta hydrolase 99.9 5.7E-20 1.2E-24 169.9 24.5 227 44-280 111-382 (383)
48 PRK11126 2-succinyl-6-hydroxy- 99.9 1.1E-20 2.4E-25 165.8 18.8 203 66-281 2-241 (242)
49 PF12695 Abhydrolase_5: Alpha/ 99.9 5.6E-21 1.2E-25 153.9 14.5 143 68-264 1-145 (145)
50 COG3458 Acetyl esterase (deace 99.9 6.9E-21 1.5E-25 159.1 14.4 247 23-282 44-317 (321)
51 COG0429 Predicted hydrolase of 99.9 7.3E-20 1.6E-24 158.6 20.7 262 16-284 18-342 (345)
52 KOG1454 Predicted hydrolase/ac 99.9 6.9E-20 1.5E-24 165.6 20.8 217 64-282 56-324 (326)
53 PRK11071 esterase YqiA; Provis 99.9 3.1E-20 6.6E-25 155.9 16.7 181 67-280 2-189 (190)
54 TIGR01392 homoserO_Ac_trn homo 99.9 4E-20 8.6E-25 171.1 18.3 233 45-280 13-351 (351)
55 PF00326 Peptidase_S9: Prolyl 99.8 2.5E-20 5.3E-25 160.3 15.2 188 82-285 3-212 (213)
56 TIGR00976 /NonD putative hydro 99.8 1.3E-19 2.7E-24 177.0 20.4 129 43-174 2-136 (550)
57 PRK08775 homoserine O-acetyltr 99.8 1.1E-19 2.3E-24 167.8 18.9 228 42-282 40-339 (343)
58 KOG4667 Predicted esterase [Li 99.8 1.4E-19 3E-24 146.1 16.2 228 35-279 8-255 (269)
59 TIGR01836 PHA_synth_III_C poly 99.8 1.5E-19 3.3E-24 167.1 17.9 229 45-281 45-349 (350)
60 PF01738 DLH: Dienelactone hyd 99.8 3.4E-19 7.3E-24 153.8 17.9 190 50-283 1-218 (218)
61 PLN02872 triacylglycerol lipas 99.8 5.7E-19 1.2E-23 163.6 20.0 258 23-284 32-391 (395)
62 PRK00175 metX homoserine O-ace 99.8 8.4E-19 1.8E-23 163.6 21.2 235 46-283 31-375 (379)
63 PRK05855 short chain dehydroge 99.8 1.1E-18 2.4E-23 172.8 22.6 230 42-283 7-293 (582)
64 KOG1838 Alpha/beta hydrolase [ 99.8 3.9E-18 8.5E-23 153.3 23.4 268 15-285 64-391 (409)
65 PF06500 DUF1100: Alpha/beta h 99.8 3.5E-19 7.5E-24 161.4 16.4 235 30-283 160-410 (411)
66 PRK10115 protease 2; Provision 99.8 2E-18 4.4E-23 171.1 22.7 245 33-286 412-679 (686)
67 PLN02442 S-formylglutathione h 99.8 4.4E-18 9.6E-23 152.2 21.8 226 42-283 24-281 (283)
68 KOG2984 Predicted hydrolase [G 99.8 5.5E-19 1.2E-23 141.2 12.9 227 45-281 28-275 (277)
69 TIGR03101 hydr2_PEP hydrolase, 99.8 1.3E-18 2.8E-23 152.4 16.3 136 40-180 3-144 (266)
70 COG2945 Predicted hydrolase of 99.8 2.8E-18 6.1E-23 136.7 16.4 193 38-280 5-205 (210)
71 COG0412 Dienelactone hydrolase 99.8 8.2E-18 1.8E-22 145.4 20.9 200 39-284 4-235 (236)
72 TIGR02821 fghA_ester_D S-formy 99.8 1.6E-17 3.4E-22 148.3 23.3 221 44-283 21-275 (275)
73 PLN02980 2-oxoglutarate decarb 99.8 6.9E-18 1.5E-22 181.4 24.4 217 65-283 1370-1640(1655)
74 PF02129 Peptidase_S15: X-Pro 99.8 6.6E-18 1.4E-22 150.5 19.5 216 46-264 1-271 (272)
75 PRK11460 putative hydrolase; P 99.8 9E-18 1.9E-22 145.7 18.9 176 63-284 13-210 (232)
76 PLN00021 chlorophyllase 99.8 1.7E-17 3.7E-22 149.3 20.5 199 28-266 17-242 (313)
77 TIGR01840 esterase_phb esteras 99.8 1.3E-17 2.8E-22 143.1 16.3 180 53-251 2-195 (212)
78 PRK10162 acetyl esterase; Prov 99.8 8.1E-17 1.7E-21 146.5 22.0 235 35-284 55-317 (318)
79 PRK05371 x-prolyl-dipeptidyl a 99.8 2.9E-16 6.4E-21 156.8 27.6 204 84-287 270-524 (767)
80 TIGR01838 PHA_synth_I poly(R)- 99.7 3.2E-16 6.9E-21 149.3 19.0 214 49-265 173-456 (532)
81 PRK06765 homoserine O-acetyltr 99.7 1.1E-15 2.5E-20 141.7 20.6 230 48-281 41-387 (389)
82 KOG2382 Predicted alpha/beta h 99.7 7E-16 1.5E-20 134.4 16.1 232 48-282 36-313 (315)
83 PF12715 Abhydrolase_7: Abhydr 99.7 2.4E-16 5.2E-21 140.5 12.3 218 15-261 71-343 (390)
84 PF02273 Acyl_transf_2: Acyl t 99.7 4.9E-15 1.1E-19 122.6 18.1 223 39-268 4-241 (294)
85 PF02230 Abhydrolase_2: Phosph 99.7 2.8E-15 6.2E-20 128.9 17.0 181 62-283 10-216 (216)
86 PF06342 DUF1057: Alpha/beta h 99.7 2E-14 4.4E-19 122.4 21.4 214 35-252 4-240 (297)
87 PF00561 Abhydrolase_1: alpha/ 99.7 1E-15 2.2E-20 132.8 12.4 180 94-275 1-228 (230)
88 KOG2564 Predicted acetyltransf 99.7 5E-15 1.1E-19 124.7 15.6 128 36-169 49-181 (343)
89 PRK07868 acyl-CoA synthetase; 99.7 7.7E-15 1.7E-19 152.8 20.7 231 50-286 49-365 (994)
90 COG2936 Predicted acyl esteras 99.7 5.4E-15 1.2E-19 138.7 17.6 136 35-173 17-162 (563)
91 KOG2281 Dipeptidyl aminopeptid 99.7 4.3E-15 9.4E-20 137.8 16.2 230 38-281 614-866 (867)
92 KOG2100 Dipeptidyl aminopeptid 99.6 9.3E-15 2E-19 145.7 19.6 224 46-286 506-751 (755)
93 COG3208 GrsT Predicted thioest 99.6 4.1E-14 8.8E-19 118.3 17.1 208 63-279 4-233 (244)
94 COG4757 Predicted alpha/beta h 99.6 1.8E-14 3.9E-19 118.2 13.4 234 40-279 8-280 (281)
95 COG0400 Predicted esterase [Ge 99.6 8.4E-14 1.8E-18 116.6 17.0 177 62-283 14-206 (207)
96 PF05728 UPF0227: Uncharacteri 99.6 2.1E-13 4.5E-18 112.9 16.9 181 69-279 2-186 (187)
97 KOG1515 Arylacetamide deacetyl 99.6 3.9E-13 8.4E-18 120.7 19.0 234 38-281 64-334 (336)
98 COG0657 Aes Esterase/lipase [L 99.5 3.6E-13 7.8E-18 122.7 18.0 226 43-280 57-308 (312)
99 PF07859 Abhydrolase_3: alpha/ 99.5 1.1E-13 2.4E-18 118.7 13.7 188 69-265 1-209 (211)
100 COG4188 Predicted dienelactone 99.5 1.3E-14 2.8E-19 128.7 6.3 222 37-266 38-296 (365)
101 KOG3043 Predicted hydrolase re 99.5 2.2E-13 4.7E-18 111.6 12.7 173 67-283 40-241 (242)
102 TIGR01839 PHA_synth_II poly(R) 99.5 4.3E-13 9.2E-18 126.7 16.5 208 50-264 201-481 (560)
103 PF12740 Chlorophyllase2: Chlo 99.5 1.2E-12 2.5E-17 112.4 16.5 175 52-266 6-207 (259)
104 PF10503 Esterase_phd: Esteras 99.5 1E-12 2.3E-17 111.3 15.8 181 50-250 1-195 (220)
105 KOG2624 Triglyceride lipase-ch 99.5 1.8E-12 3.8E-17 118.8 18.4 133 34-170 45-199 (403)
106 COG0596 MhpC Predicted hydrola 99.5 3.1E-12 6.8E-17 112.3 19.7 209 66-279 21-279 (282)
107 COG4099 Predicted peptidase [G 99.5 8E-13 1.7E-17 112.4 12.7 216 16-281 143-384 (387)
108 KOG2551 Phospholipase/carboxyh 99.5 4.7E-12 1E-16 103.9 15.6 179 64-284 3-222 (230)
109 COG2021 MET2 Homoserine acetyl 99.4 1.8E-11 3.9E-16 108.6 19.3 232 47-281 35-367 (368)
110 KOG1553 Predicted alpha/beta h 99.4 9.6E-13 2.1E-17 114.0 10.0 183 39-241 216-400 (517)
111 PF12146 Hydrolase_4: Putative 99.4 1.1E-12 2.4E-17 92.5 7.6 63 47-113 1-63 (79)
112 PF08840 BAAT_C: BAAT / Acyl-C 99.4 6E-13 1.3E-17 113.6 5.0 164 120-284 4-212 (213)
113 PF03403 PAF-AH_p_II: Platelet 99.4 4.6E-12 9.9E-17 117.1 11.1 178 64-285 98-361 (379)
114 PF08538 DUF1749: Protein of u 99.3 6.6E-12 1.4E-16 109.7 10.6 209 65-279 32-302 (303)
115 PF06821 Ser_hydrolase: Serine 99.3 4E-11 8.7E-16 98.3 14.6 148 69-266 1-155 (171)
116 PF09752 DUF2048: Uncharacteri 99.3 1E-10 2.2E-15 103.9 17.9 221 51-280 78-347 (348)
117 COG3571 Predicted hydrolase of 99.3 7.7E-11 1.7E-15 91.3 14.9 165 63-265 11-182 (213)
118 PF07224 Chlorophyllase: Chlor 99.3 3.5E-11 7.7E-16 101.1 13.5 116 48-172 31-159 (307)
119 PF00975 Thioesterase: Thioest 99.3 4.7E-11 1E-15 103.8 14.8 207 67-281 1-227 (229)
120 TIGR03230 lipo_lipase lipoprot 99.3 1.3E-11 2.8E-16 114.8 11.6 108 64-171 39-155 (442)
121 cd00707 Pancreat_lipase_like P 99.3 5E-12 1.1E-16 112.4 7.9 109 63-171 33-148 (275)
122 TIGR01849 PHB_depoly_PhaZ poly 99.3 5.7E-10 1.2E-14 102.8 20.5 247 26-281 64-405 (406)
123 PF05677 DUF818: Chlamydia CHL 99.3 1.2E-09 2.5E-14 96.0 20.5 220 37-283 112-364 (365)
124 PF03959 FSH1: Serine hydrolas 99.3 6.6E-12 1.4E-16 107.4 6.5 171 65-273 3-210 (212)
125 TIGR03502 lipase_Pla1_cef extr 99.2 5.4E-11 1.2E-15 117.3 11.3 92 65-156 448-575 (792)
126 PRK10439 enterobactin/ferric e 99.2 1.7E-09 3.7E-14 101.2 19.1 191 45-266 189-393 (411)
127 COG1505 Serine proteases of th 99.2 2.2E-10 4.8E-15 106.9 12.0 233 33-283 390-647 (648)
128 KOG3847 Phospholipase A2 (plat 99.2 4.5E-10 9.7E-15 96.6 12.8 109 62-170 114-275 (399)
129 PF06057 VirJ: Bacterial virul 99.2 2E-10 4.2E-15 93.3 9.5 180 67-280 3-190 (192)
130 PF03583 LIP: Secretory lipase 99.2 4.9E-09 1.1E-13 93.8 19.3 200 84-288 17-287 (290)
131 PRK04940 hypothetical protein; 99.1 3.1E-09 6.6E-14 86.3 15.7 117 136-280 60-178 (180)
132 KOG3101 Esterase D [General fu 99.1 9.7E-10 2.1E-14 89.2 12.6 221 43-279 21-276 (283)
133 PF10230 DUF2305: Uncharacteri 99.1 1.1E-08 2.5E-13 90.3 20.6 105 66-170 2-122 (266)
134 KOG4627 Kynurenine formamidase 99.1 2.1E-10 4.6E-15 92.7 8.6 187 49-265 55-248 (270)
135 COG1770 PtrB Protease II [Amin 99.1 1.5E-09 3.3E-14 102.6 15.1 209 33-250 415-635 (682)
136 PF00756 Esterase: Putative es 99.1 1.8E-10 3.9E-15 101.6 8.4 126 47-172 5-152 (251)
137 KOG2237 Predicted serine prote 99.1 1.5E-09 3.2E-14 102.0 14.3 244 33-284 437-707 (712)
138 COG3243 PhaC Poly(3-hydroxyalk 99.1 9.7E-10 2.1E-14 99.0 12.5 196 65-264 106-370 (445)
139 PF06028 DUF915: Alpha/beta hy 99.1 2.4E-09 5.2E-14 93.0 13.0 201 64-279 9-252 (255)
140 PF03096 Ndr: Ndr family; Int 99.1 3.2E-08 6.9E-13 86.0 18.9 232 42-281 4-278 (283)
141 COG3509 LpqC Poly(3-hydroxybut 99.1 2.1E-09 4.5E-14 92.4 11.3 124 45-170 42-179 (312)
142 KOG2931 Differentiation-relate 99.0 3.5E-07 7.7E-12 78.6 21.3 233 41-281 26-305 (326)
143 KOG2112 Lysophospholipase [Lip 99.0 1.8E-08 4E-13 82.5 13.1 176 66-281 3-203 (206)
144 COG3545 Predicted esterase of 98.9 5E-08 1.1E-12 77.6 14.6 169 66-280 2-177 (181)
145 PRK10252 entF enterobactin syn 98.9 7.9E-08 1.7E-12 104.3 18.6 206 65-283 1067-1294(1296)
146 PF07819 PGAP1: PGAP1-like pro 98.9 1.9E-08 4.1E-13 86.5 11.0 103 65-170 3-123 (225)
147 PF10142 PhoPQ_related: PhoPQ- 98.9 4.1E-07 8.9E-12 82.8 19.1 155 134-289 170-327 (367)
148 COG4814 Uncharacterized protei 98.8 1.3E-07 2.8E-12 79.4 12.7 201 66-281 45-286 (288)
149 PF12048 DUF3530: Protein of u 98.8 1.4E-06 3.1E-11 78.6 19.8 201 40-282 65-309 (310)
150 KOG2565 Predicted hydrolases o 98.8 5.1E-07 1.1E-11 79.9 16.0 119 45-165 131-259 (469)
151 COG1073 Hydrolases of the alph 98.8 9.9E-08 2.2E-12 85.9 12.1 233 48-283 31-298 (299)
152 KOG3975 Uncharacterized conser 98.7 5.3E-06 1.2E-10 69.7 19.0 105 62-166 25-143 (301)
153 cd00312 Esterase_lipase Estera 98.6 1.1E-07 2.4E-12 92.4 8.4 119 49-170 78-213 (493)
154 PF10340 DUF2424: Protein of u 98.6 1.2E-06 2.6E-11 79.5 14.0 106 64-173 120-238 (374)
155 PF01674 Lipase_2: Lipase (cla 98.6 2.5E-08 5.5E-13 84.5 2.3 89 67-156 2-95 (219)
156 PLN02733 phosphatidylcholine-s 98.6 1.5E-07 3.3E-12 88.3 7.6 93 77-171 105-202 (440)
157 PF05990 DUF900: Alpha/beta hy 98.5 1.7E-06 3.8E-11 74.8 12.4 110 63-172 15-139 (233)
158 COG2272 PnbA Carboxylesterase 98.5 1.7E-07 3.7E-12 86.6 6.2 116 50-171 80-218 (491)
159 COG3150 Predicted esterase [Ge 98.5 3.5E-06 7.7E-11 66.3 12.1 182 69-280 2-187 (191)
160 KOG3253 Predicted alpha/beta h 98.5 8.3E-07 1.8E-11 83.1 9.7 161 64-266 174-347 (784)
161 PF00135 COesterase: Carboxyle 98.4 4E-07 8.6E-12 89.5 7.4 120 50-169 109-244 (535)
162 KOG4840 Predicted hydrolases o 98.4 2.9E-05 6.3E-10 64.2 16.4 104 64-173 34-147 (299)
163 COG2382 Fes Enterochelin ester 98.4 2.5E-06 5.4E-11 74.3 10.3 125 47-171 79-213 (299)
164 COG3319 Thioesterase domains o 98.4 1.1E-06 2.4E-11 76.2 8.0 100 67-171 1-104 (257)
165 smart00824 PKS_TE Thioesterase 98.4 1.1E-05 2.4E-10 68.6 13.9 92 71-168 2-100 (212)
166 PF05705 DUF829: Eukaryotic pr 98.4 2.2E-05 4.7E-10 68.7 15.9 203 67-279 1-240 (240)
167 PF00151 Lipase: Lipase; Inte 98.3 4.5E-07 9.7E-12 82.4 3.6 107 63-171 68-188 (331)
168 PTZ00472 serine carboxypeptida 98.3 1.2E-05 2.6E-10 76.8 12.8 125 46-173 59-219 (462)
169 COG0627 Predicted esterase [Ge 98.3 6.1E-06 1.3E-10 74.1 10.2 214 63-285 51-314 (316)
170 KOG1551 Uncharacterized conser 98.2 1.1E-05 2.4E-10 68.3 10.2 217 64-282 111-366 (371)
171 PF11339 DUF3141: Protein of u 98.2 0.00024 5.2E-09 66.4 17.8 96 64-169 67-174 (581)
172 COG4782 Uncharacterized protei 98.1 4.4E-05 9.5E-10 68.1 11.1 113 64-176 114-240 (377)
173 PF05057 DUF676: Putative seri 98.0 1.2E-05 2.6E-10 69.0 6.7 88 65-155 3-97 (217)
174 COG1075 LipA Predicted acetylt 97.9 3.9E-05 8.5E-10 70.3 7.6 104 65-173 58-167 (336)
175 PF11144 DUF2920: Protein of u 97.9 0.00017 3.7E-09 65.9 11.5 129 40-171 12-220 (403)
176 PF05577 Peptidase_S28: Serine 97.9 0.00012 2.7E-09 69.9 11.1 106 66-171 29-149 (434)
177 COG2819 Predicted hydrolase of 97.8 0.0034 7.4E-08 54.3 17.9 43 128-170 127-172 (264)
178 COG3946 VirJ Type IV secretory 97.8 0.00051 1.1E-08 62.1 13.2 91 64-158 258-348 (456)
179 PF04301 DUF452: Protein of un 97.7 0.00024 5.2E-09 59.8 9.4 78 66-169 11-89 (213)
180 KOG3967 Uncharacterized conser 97.6 0.0018 3.9E-08 53.4 12.2 106 63-168 98-225 (297)
181 PF07082 DUF1350: Protein of u 97.5 0.013 2.9E-07 50.1 16.1 100 64-167 15-122 (250)
182 KOG3724 Negative regulator of 97.4 0.00036 7.8E-09 68.1 7.1 96 65-167 88-217 (973)
183 PF00450 Peptidase_S10: Serine 97.3 0.008 1.7E-07 57.1 15.2 135 41-177 17-188 (415)
184 KOG1516 Carboxylesterase and r 97.2 0.0012 2.6E-08 65.1 8.6 116 50-169 97-231 (545)
185 COG4287 PqaA PhoPQ-activated p 97.2 0.0017 3.6E-08 58.1 8.3 148 134-282 232-387 (507)
186 PF08386 Abhydrolase_4: TAP-li 97.2 0.0016 3.5E-08 48.5 6.7 57 224-281 34-93 (103)
187 PF02450 LCAT: Lecithin:choles 97.1 0.0013 2.8E-08 61.6 7.4 83 81-171 66-161 (389)
188 PLN02606 palmitoyl-protein thi 97.1 0.0025 5.4E-08 56.3 8.3 99 66-169 26-131 (306)
189 KOG2183 Prolylcarboxypeptidase 97.0 0.0025 5.3E-08 58.0 7.5 101 67-167 81-199 (492)
190 PF04083 Abhydro_lipase: Parti 97.0 0.003 6.5E-08 42.1 6.0 49 34-82 9-59 (63)
191 KOG2541 Palmitoyl protein thio 97.0 0.0065 1.4E-07 52.2 9.1 98 67-169 24-127 (296)
192 TIGR03712 acc_sec_asp2 accesso 96.9 0.28 6.1E-06 46.2 20.1 109 61-176 284-396 (511)
193 PLN03016 sinapoylglucose-malat 96.9 0.012 2.6E-07 55.8 11.2 126 45-172 47-212 (433)
194 PF02089 Palm_thioest: Palmito 96.8 0.0014 3E-08 57.4 4.1 102 65-169 4-115 (279)
195 PLN02209 serine carboxypeptida 96.7 0.042 9E-07 52.2 13.5 132 40-173 44-215 (437)
196 PLN02633 palmitoyl protein thi 96.5 0.023 5E-07 50.4 9.3 99 66-169 25-130 (314)
197 PLN02517 phosphatidylcholine-s 96.4 0.0062 1.3E-07 58.6 5.9 86 81-170 157-263 (642)
198 cd00741 Lipase Lipase. Lipase 96.3 0.0066 1.4E-07 48.9 4.9 50 120-169 12-66 (153)
199 PF01764 Lipase_3: Lipase (cla 96.3 0.0072 1.6E-07 47.7 4.8 50 121-170 49-106 (140)
200 KOG2182 Hydrolytic enzymes of 96.2 0.035 7.5E-07 52.1 9.3 128 42-170 63-207 (514)
201 KOG4388 Hormone-sensitive lipa 96.2 0.02 4.2E-07 54.5 7.5 101 63-169 393-507 (880)
202 cd00519 Lipase_3 Lipase (class 96.0 0.019 4.2E-07 49.6 6.4 52 120-171 112-169 (229)
203 KOG2369 Lecithin:cholesterol a 95.9 0.013 2.7E-07 54.6 5.2 76 80-159 124-205 (473)
204 PF07519 Tannase: Tannase and 95.9 0.13 2.7E-06 49.6 12.2 129 42-177 7-157 (474)
205 COG4947 Uncharacterized protei 95.6 0.054 1.2E-06 43.4 6.7 58 120-177 85-143 (227)
206 KOG1282 Serine carboxypeptidas 95.5 0.19 4.1E-06 47.7 11.2 129 40-171 49-214 (454)
207 PLN02454 triacylglycerol lipas 95.5 0.047 1E-06 50.7 7.0 52 120-171 210-272 (414)
208 PF05576 Peptidase_S37: PS-10 95.5 0.029 6.2E-07 51.5 5.5 105 63-170 60-169 (448)
209 PF11288 DUF3089: Protein of u 95.4 0.022 4.8E-07 47.7 4.4 71 86-157 39-116 (207)
210 PF11187 DUF2974: Protein of u 95.1 0.045 9.7E-07 47.0 5.4 34 136-169 84-122 (224)
211 COG2830 Uncharacterized protei 94.1 0.038 8.2E-07 43.7 2.3 78 65-168 10-88 (214)
212 PLN00413 triacylglycerol lipas 94.0 0.07 1.5E-06 50.2 4.4 35 121-155 269-303 (479)
213 KOG4389 Acetylcholinesterase/B 94.0 0.1 2.2E-06 48.9 5.3 116 50-170 121-255 (601)
214 PLN02162 triacylglycerol lipas 93.9 0.081 1.8E-06 49.7 4.4 35 121-155 263-297 (475)
215 PF01083 Cutinase: Cutinase; 93.7 0.14 3E-06 42.4 5.2 77 93-170 39-122 (179)
216 PLN02934 triacylglycerol lipas 93.6 0.081 1.8E-06 50.2 4.1 35 121-155 306-340 (515)
217 PF06259 Abhydrolase_8: Alpha/ 93.6 0.22 4.8E-06 40.9 6.1 50 119-168 91-142 (177)
218 PLN02571 triacylglycerol lipas 93.3 0.11 2.3E-06 48.5 4.2 37 120-156 208-246 (413)
219 PLN02310 triacylglycerol lipas 93.2 0.1 2.3E-06 48.4 3.9 21 136-156 209-229 (405)
220 PLN02408 phospholipase A1 93.2 0.12 2.6E-06 47.4 4.3 36 121-156 183-220 (365)
221 COG2939 Carboxypeptidase C (ca 93.0 0.37 8E-06 45.7 7.2 94 62-156 97-218 (498)
222 KOG4372 Predicted alpha/beta h 93.0 0.2 4.3E-06 46.1 5.3 90 63-156 77-170 (405)
223 PLN03037 lipase class 3 family 92.8 0.12 2.6E-06 49.3 3.8 21 136-156 318-338 (525)
224 KOG2521 Uncharacterized conser 92.6 6.9 0.00015 35.9 14.6 223 64-288 36-296 (350)
225 KOG1202 Animal-type fatty acid 92.1 5.5 0.00012 42.2 14.3 96 63-170 2120-2219(2376)
226 PLN02324 triacylglycerol lipas 92.0 0.19 4.1E-06 46.8 4.1 36 120-155 197-234 (415)
227 PLN02802 triacylglycerol lipas 91.6 0.23 5E-06 47.3 4.2 36 121-156 313-350 (509)
228 KOG4540 Putative lipase essent 91.5 0.42 9.1E-06 41.7 5.3 49 120-169 260-308 (425)
229 COG5153 CVT17 Putative lipase 91.5 0.42 9.1E-06 41.7 5.3 49 120-169 260-308 (425)
230 PLN02719 triacylglycerol lipas 91.2 0.26 5.7E-06 46.9 4.1 36 120-155 277-317 (518)
231 PLN02761 lipase class 3 family 91.2 0.26 5.7E-06 47.0 4.1 36 120-155 272-313 (527)
232 PLN02753 triacylglycerol lipas 91.2 0.27 5.8E-06 47.0 4.1 36 120-155 291-331 (531)
233 PLN02847 triacylglycerol lipas 90.9 0.31 6.7E-06 47.2 4.4 31 126-156 241-271 (633)
234 PLN02213 sinapoylglucose-malat 90.1 1.2 2.6E-05 40.7 7.4 78 95-172 3-98 (319)
235 PF09994 DUF2235: Uncharacteri 89.7 2.3 4.9E-05 38.0 8.6 90 67-156 2-112 (277)
236 KOG4569 Predicted lipase [Lipi 89.5 0.42 9E-06 43.9 3.9 37 120-156 155-191 (336)
237 PF06441 EHN: Epoxide hydrolas 88.1 1.2 2.6E-05 33.6 4.8 37 45-85 75-111 (112)
238 COG3673 Uncharacterized conser 87.6 3.7 7.9E-05 36.8 8.1 94 63-156 28-142 (423)
239 PF07519 Tannase: Tannase and 85.4 1.7 3.6E-05 42.0 5.5 62 223-284 352-429 (474)
240 PF08237 PE-PPE: PE-PPE domain 85.3 3.4 7.3E-05 35.5 6.8 63 93-156 2-68 (225)
241 PF06850 PHB_depo_C: PHB de-po 85.0 1.5 3.2E-05 36.4 4.1 58 224-281 134-201 (202)
242 PF05277 DUF726: Protein of un 83.4 2.6 5.6E-05 38.7 5.5 39 134-172 218-262 (345)
243 COG0529 CysC Adenylylsulfate k 80.5 11 0.00025 30.8 7.5 39 63-101 19-59 (197)
244 COG4553 DepA Poly-beta-hydroxy 77.2 54 0.0012 29.3 12.2 102 63-171 100-210 (415)
245 KOG1283 Serine carboxypeptidas 77.0 35 0.00075 30.9 10.0 130 45-177 11-173 (414)
246 PF03283 PAE: Pectinacetyleste 75.8 24 0.00051 32.8 9.3 37 119-155 137-175 (361)
247 COG4822 CbiK Cobalamin biosynt 73.5 18 0.0004 30.4 7.0 63 63-141 135-199 (265)
248 PF06309 Torsin: Torsin; Inte 67.8 8.2 0.00018 29.7 3.7 31 63-93 49-81 (127)
249 PLN02213 sinapoylglucose-malat 62.4 25 0.00053 32.1 6.5 58 224-281 233-316 (319)
250 PF11713 Peptidase_C80: Peptid 58.9 5.4 0.00012 32.1 1.3 50 99-148 59-116 (157)
251 COG3727 Vsr DNA G:T-mismatch r 55.2 12 0.00025 28.8 2.5 69 18-99 22-114 (150)
252 PF12242 Eno-Rase_NADH_b: NAD( 52.8 27 0.00058 24.2 3.7 38 119-156 20-60 (78)
253 KOG2029 Uncharacterized conser 52.3 39 0.00084 33.3 6.0 34 122-155 510-545 (697)
254 PF10605 3HBOH: 3HB-oligomer h 52.0 31 0.00067 34.0 5.3 34 137-170 286-321 (690)
255 KOG2385 Uncharacterized conser 50.8 33 0.00071 33.1 5.2 40 134-173 445-490 (633)
256 TIGR03709 PPK2_rel_1 polyphosp 50.8 48 0.001 29.3 6.0 69 64-145 53-123 (264)
257 PF00450 Peptidase_S10: Serine 50.6 23 0.00049 33.5 4.4 57 224-280 330-414 (415)
258 PTZ00472 serine carboxypeptida 50.1 38 0.00083 32.7 5.8 58 224-281 364-458 (462)
259 COG3946 VirJ Type IV secretory 50.1 49 0.0011 31.0 6.0 105 63-167 45-154 (456)
260 PRK12467 peptide synthase; Pro 49.5 55 0.0012 41.0 8.1 88 64-156 3690-3777(3956)
261 PLN03016 sinapoylglucose-malat 49.3 54 0.0012 31.4 6.6 58 224-281 347-430 (433)
262 COG1087 GalE UDP-glucose 4-epi 48.5 67 0.0014 29.0 6.4 95 71-168 4-118 (329)
263 PF10081 Abhydrolase_9: Alpha/ 47.2 27 0.00058 31.0 3.8 49 122-170 93-147 (289)
264 TIGR03707 PPK2_P_aer polyphosp 46.9 64 0.0014 27.8 6.1 71 65-148 29-101 (230)
265 PLN02209 serine carboxypeptida 45.7 64 0.0014 30.9 6.5 57 224-280 351-433 (437)
266 TIGR00128 fabD malonyl CoA-acy 45.4 26 0.00057 31.2 3.7 30 127-156 74-103 (290)
267 PF06792 UPF0261: Uncharacteri 44.3 2.7E+02 0.0059 26.3 10.0 93 67-159 2-118 (403)
268 PF00698 Acyl_transf_1: Acyl t 44.2 20 0.00043 32.6 2.8 31 125-156 74-104 (318)
269 cd07198 Patatin Patatin-like p 43.9 37 0.00081 27.6 4.1 34 124-158 15-48 (172)
270 TIGR03249 KdgD 5-dehydro-4-deo 43.6 2.4E+02 0.0053 25.3 11.0 85 78-170 24-110 (296)
271 smart00827 PKS_AT Acyl transfe 43.4 29 0.00063 31.0 3.7 29 126-155 73-101 (298)
272 KOG1752 Glutaredoxin and relat 42.9 1.4E+02 0.003 22.2 6.6 79 64-157 12-90 (104)
273 PF01583 APS_kinase: Adenylyls 41.3 38 0.00083 27.2 3.6 36 66-101 1-38 (156)
274 cd07225 Pat_PNPLA6_PNPLA7 Pata 40.4 42 0.00091 30.4 4.2 63 81-158 3-65 (306)
275 PRK10279 hypothetical protein; 40.2 38 0.00082 30.6 3.8 34 123-157 21-54 (300)
276 PRK02399 hypothetical protein; 39.5 3.4E+02 0.0073 25.7 9.9 92 67-159 4-120 (406)
277 TIGR03131 malonate_mdcH malona 38.9 38 0.00083 30.3 3.8 29 127-156 68-96 (295)
278 cd07207 Pat_ExoU_VipD_like Exo 37.5 53 0.0011 27.2 4.2 35 123-158 15-49 (194)
279 PF03853 YjeF_N: YjeF-related 37.4 36 0.00077 27.7 3.0 36 64-99 23-58 (169)
280 COG0331 FabD (acyl-carrier-pro 36.7 41 0.00088 30.5 3.5 30 126-155 74-104 (310)
281 cd07210 Pat_hypo_W_succinogene 35.7 63 0.0014 27.6 4.4 34 124-158 17-50 (221)
282 cd00883 beta_CA_cladeA Carboni 35.1 44 0.00095 27.6 3.2 34 121-154 66-99 (182)
283 PF04084 ORC2: Origin recognit 35.0 2E+02 0.0044 26.3 7.7 96 70-165 57-174 (326)
284 PLN03006 carbonate dehydratase 34.8 40 0.00086 30.3 3.0 33 122-154 158-190 (301)
285 TIGR02873 spore_ylxY probable 34.5 39 0.00085 29.9 3.0 35 66-100 230-264 (268)
286 KOG1411 Aspartate aminotransfe 34.4 32 0.0007 31.4 2.4 131 4-151 138-277 (427)
287 PRK06398 aldose dehydrogenase; 33.9 1.4E+02 0.003 25.9 6.5 63 69-133 8-70 (258)
288 PF14253 AbiH: Bacteriophage a 33.9 30 0.00066 30.4 2.2 16 133-148 232-247 (270)
289 KOG1282 Serine carboxypeptidas 33.4 1.2E+02 0.0025 29.3 6.0 57 225-281 364-447 (454)
290 TIGR02764 spore_ybaN_pdaB poly 32.8 33 0.00072 28.4 2.2 34 67-100 152-188 (191)
291 cd00951 KDGDH 5-dehydro-4-deox 32.6 3.6E+02 0.0079 24.1 10.9 85 78-170 19-105 (289)
292 cd07227 Pat_Fungal_NTE1 Fungal 32.1 70 0.0015 28.4 4.2 34 123-157 26-59 (269)
293 PF00326 Peptidase_S9: Prolyl 31.7 88 0.0019 26.2 4.7 65 65-133 143-210 (213)
294 PLN00416 carbonate dehydratase 31.7 50 0.0011 29.0 3.1 34 121-154 125-158 (258)
295 COG3580 Uncharacterized protei 31.6 1.2E+02 0.0026 27.3 5.3 40 64-103 201-240 (351)
296 cd07209 Pat_hypo_Ecoli_Z1214_l 31.0 73 0.0016 27.0 4.0 34 124-158 15-48 (215)
297 PRK03620 5-dehydro-4-deoxygluc 30.9 4E+02 0.0087 24.0 10.8 85 78-170 26-112 (303)
298 cd07228 Pat_NTE_like_bacteria 30.7 91 0.002 25.4 4.4 34 124-158 17-50 (175)
299 PF00484 Pro_CA: Carbonic anhy 30.3 1.2E+02 0.0026 24.0 4.9 35 120-154 39-73 (153)
300 TIGR02884 spore_pdaA delta-lac 30.2 56 0.0012 28.0 3.2 35 66-100 186-221 (224)
301 COG1752 RssA Predicted esteras 29.6 74 0.0016 28.8 4.0 34 124-158 28-61 (306)
302 KOG2170 ATPase of the AAA+ sup 29.4 74 0.0016 28.7 3.7 32 62-93 105-138 (344)
303 cd07212 Pat_PNPLA9 Patatin-lik 29.1 80 0.0017 28.7 4.1 33 124-156 16-52 (312)
304 cd07205 Pat_PNPLA6_PNPLA7_NTE1 28.7 1E+02 0.0022 25.0 4.4 34 123-157 16-49 (175)
305 COG3494 Uncharacterized protei 28.5 1.4E+02 0.003 26.1 5.1 57 83-142 18-76 (279)
306 PRK15219 carbonic anhydrase; P 28.4 67 0.0014 28.0 3.3 34 121-154 128-161 (245)
307 cd00884 beta_CA_cladeB Carboni 28.4 64 0.0014 26.9 3.1 34 121-154 72-105 (190)
308 cd07224 Pat_like Patatin-like 28.4 88 0.0019 27.0 4.1 35 123-158 15-51 (233)
309 PF03976 PPK2: Polyphosphate k 28.2 37 0.00081 29.2 1.7 70 65-147 29-100 (228)
310 TIGR02816 pfaB_fam PfaB family 27.4 73 0.0016 31.4 3.7 28 131-158 260-287 (538)
311 PRK07577 short chain dehydroge 27.2 2.2E+02 0.0048 23.9 6.5 30 71-102 7-36 (234)
312 PLN03014 carbonic anhydrase 27.2 57 0.0012 29.9 2.7 34 121-154 205-238 (347)
313 TIGR00632 vsr DNA mismatch end 26.8 90 0.0019 23.7 3.3 14 86-99 100-113 (117)
314 TIGR03708 poly_P_AMP_trns poly 26.7 2E+02 0.0044 28.1 6.5 73 64-149 37-111 (493)
315 KOG1199 Short-chain alcohol de 26.7 2E+02 0.0043 23.6 5.4 79 66-148 8-94 (260)
316 PF09419 PGP_phosphatase: Mito 26.6 2.5E+02 0.0053 22.9 6.1 54 88-146 35-88 (168)
317 COG3933 Transcriptional antite 26.5 4.6E+02 0.0099 25.2 8.4 75 63-152 106-181 (470)
318 PLN02154 carbonic anhydrase 26.2 75 0.0016 28.4 3.2 34 121-154 151-184 (290)
319 PF01656 CbiA: CobQ/CobB/MinD/ 26.2 68 0.0015 26.2 3.0 33 70-102 2-36 (195)
320 cd00382 beta_CA Carbonic anhyd 26.0 82 0.0018 23.9 3.1 31 121-151 44-74 (119)
321 PLN03019 carbonic anhydrase 26.0 61 0.0013 29.5 2.7 34 121-154 200-233 (330)
322 PF05724 TPMT: Thiopurine S-me 25.7 1.1E+02 0.0023 26.2 4.1 31 67-102 38-68 (218)
323 PRK13256 thiopurine S-methyltr 25.5 62 0.0013 27.9 2.6 29 69-102 46-74 (226)
324 TIGR01118 lacA galactose-6-pho 24.7 2.1E+02 0.0046 22.6 5.2 72 83-168 16-87 (141)
325 COG0288 CynT Carbonic anhydras 24.5 72 0.0016 27.0 2.8 37 120-156 76-112 (207)
326 COG0218 Predicted GTPase [Gene 24.5 1.2E+02 0.0025 25.6 3.9 58 222-281 133-198 (200)
327 cd01523 RHOD_Lact_B Member of 24.1 1.1E+02 0.0023 21.9 3.4 34 64-103 60-93 (100)
328 cd07230 Pat_TGL4-5_like Triacy 24.0 83 0.0018 30.0 3.4 34 124-158 90-123 (421)
329 PRK10437 carbonic anhydrase; P 23.8 94 0.002 26.6 3.3 34 121-154 76-109 (220)
330 PRK06171 sorbitol-6-phosphate 23.4 3E+02 0.0066 23.7 6.8 74 69-146 11-86 (266)
331 COG0400 Predicted esterase [Ge 23.1 3E+02 0.0066 23.3 6.3 59 63-132 143-205 (207)
332 cd01521 RHOD_PspE2 Member of t 22.9 1.8E+02 0.0039 21.3 4.5 34 64-99 63-96 (110)
333 cd03818 GT1_ExpC_like This fam 22.8 1.4E+02 0.003 27.9 4.7 37 69-107 2-38 (396)
334 COG1506 DAP2 Dipeptidyl aminop 22.5 2.2E+02 0.0047 28.8 6.2 67 63-133 548-617 (620)
335 PLN03050 pyridoxine (pyridoxam 22.3 1.3E+02 0.0028 26.3 4.0 34 67-100 61-94 (246)
336 PF08484 Methyltransf_14: C-me 21.8 2.4E+02 0.0053 22.7 5.2 45 122-168 57-102 (160)
337 PF13207 AAA_17: AAA domain; P 21.6 71 0.0015 23.8 2.0 31 69-101 1-32 (121)
338 PRK07856 short chain dehydroge 21.5 2.8E+02 0.006 23.8 6.1 73 70-146 9-84 (252)
339 PRK06091 membrane protein FdrA 21.3 4.5E+02 0.0098 26.1 7.7 38 66-106 142-179 (555)
340 KOG0635 Adenosine 5'-phosphosu 20.8 1.8E+02 0.0038 23.4 4.0 38 64-101 28-67 (207)
341 PRK12613 galactose-6-phosphate 20.6 3.6E+02 0.0079 21.3 5.7 72 83-169 16-87 (141)
342 PRK08621 galactose-6-phosphate 20.6 3.4E+02 0.0074 21.4 5.6 72 83-168 16-87 (142)
343 PRK06523 short chain dehydroge 20.3 4.3E+02 0.0094 22.6 7.1 32 69-102 11-42 (260)
344 TIGR03708 poly_P_AMP_trns poly 20.1 3.3E+02 0.007 26.7 6.5 69 64-146 296-367 (493)
345 PRK06731 flhF flagellar biosyn 20.0 6.2E+02 0.013 22.4 7.9 63 93-165 154-218 (270)
346 cd07208 Pat_hypo_Ecoli_yjju_li 20.0 1.5E+02 0.0032 26.1 4.0 35 123-158 14-49 (266)
No 1
>PRK13604 luxD acyl transferase; Provisional
Probab=99.97 E-value=2.8e-29 Score=220.25 Aligned_cols=235 Identities=14% Similarity=0.123 Sum_probs=172.1
Q ss_pred eeeEEEEEEcCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCC-CCCCCCCcC
Q 016885 35 YKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGS-GLSDGDYVS 113 (381)
Q Consensus 35 ~~~~~v~~~~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~-G~S~~~~~~ 113 (381)
+...+..+...||..|.+++..|.. ....+.++||++||+++....+..+++.|+++||+|+.+|+||+ |.|+|....
T Consensus 7 ~~~~~~~~~~~dG~~L~Gwl~~P~~-~~~~~~~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~ 85 (307)
T PRK13604 7 FKTIDHVICLENGQSIRVWETLPKE-NSPKKNNTILIASGFARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDE 85 (307)
T ss_pred ccchhheEEcCCCCEEEEEEEcCcc-cCCCCCCEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCcccc
Confidence 3444556888999999999888853 23467799999999999887799999999999999999999988 999887644
Q ss_pred CCcc-hhhHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhhccCCCccEEEeccCccCHHHHHHHHHHHhhhhCCcccH
Q 016885 114 LGWH-EKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTV 192 (381)
Q Consensus 114 ~~~~-~~~d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~v~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (381)
.... ...|+.++++|++++ ..++|+|+||||||.+++.+|... +++++|+.||+.++.+.+..........+|....
T Consensus 86 ~t~s~g~~Dl~aaid~lk~~-~~~~I~LiG~SmGgava~~~A~~~-~v~~lI~~sp~~~l~d~l~~~~~~~~~~~p~~~l 163 (307)
T PRK13604 86 FTMSIGKNSLLTVVDWLNTR-GINNLGLIAASLSARIAYEVINEI-DLSFLITAVGVVNLRDTLERALGYDYLSLPIDEL 163 (307)
T ss_pred CcccccHHHHHHHHHHHHhc-CCCceEEEEECHHHHHHHHHhcCC-CCCEEEEcCCcccHHHHHHHhhhcccccCccccc
Confidence 3322 268999999999886 468899999999999998777644 4999999999999887766533320001111111
Q ss_pred HHH-----HHH-HHHHhhhhhhcccc-ccchhhcCCCCCCcEEEEeeCCCCccChHHHHHHHHHcC-CCceEEEeCC-CC
Q 016885 193 KMA-----VQY-MRRVIQKKAKFDIM-DLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA-GDKNIIKFDG-DH 263 (381)
Q Consensus 193 ~~~-----~~~-~~~~~~~~~~~~~~-~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~-~~~~~~~~~g-gH 263 (381)
... ... ...++.....+++. ..++.+.+.++++|+|+|||..|.+||++.++.+++.++ .++++++++| +|
T Consensus 164 p~~~d~~g~~l~~~~f~~~~~~~~~~~~~s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H 243 (307)
T PRK13604 164 PEDLDFEGHNLGSEVFVTDCFKHGWDTLDSTINKMKGLDIPFIAFTANNDSWVKQSEVIDLLDSIRSEQCKLYSLIGSSH 243 (307)
T ss_pred ccccccccccccHHHHHHHHHhcCccccccHHHHHhhcCCCEEEEEcCCCCccCHHHHHHHHHHhccCCcEEEEeCCCcc
Confidence 000 000 01222222222222 234456677788999999999999999999999999885 5789999998 99
Q ss_pred CCCChhhHH
Q 016885 264 NSSRPQFYY 272 (381)
Q Consensus 264 ~~~~~~~~~ 272 (381)
.+...-.+.
T Consensus 244 ~l~~~~~~~ 252 (307)
T PRK13604 244 DLGENLVVL 252 (307)
T ss_pred ccCcchHHH
Confidence 987554333
No 2
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.96 E-value=2.9e-27 Score=218.69 Aligned_cols=247 Identities=21% Similarity=0.335 Sum_probs=165.2
Q ss_pred eeeEEEEEEcCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhc-HHHHHHHhccCCcEEEEeCCCCCCCCCCCCcC
Q 016885 35 YKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD-ANEAAVILLPSNITLFTLDFSGSGLSDGDYVS 113 (381)
Q Consensus 35 ~~~~~v~~~~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~-~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~ 113 (381)
+..++..+.+.||.+|.+..|.|. .+.++++|||+||++++... |..++..|+++||.|+++|+||||.|++....
T Consensus 59 ~~~~~~~~~~~~g~~l~~~~~~p~---~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~ 135 (349)
T PLN02385 59 IKTEESYEVNSRGVEIFSKSWLPE---NSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHGY 135 (349)
T ss_pred cceeeeeEEcCCCCEEEEEEEecC---CCCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCC
Confidence 334455677789999999999985 23567999999999987664 56788899989999999999999999864321
Q ss_pred -CCcch-hhHHHHHHHHHHhcC--CCCcEEEEEEchhHHHHHHhhccCCC-ccEEEeccCccCHHH------HHHHHHHH
Q 016885 114 -LGWHE-KDDLKVVVSYLRGNK--QTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFD------LMLELVDV 182 (381)
Q Consensus 114 -~~~~~-~~d~~~~i~~l~~~~--~~~~i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~~~~------~~~~~~~~ 182 (381)
..+.. ++|+.+.++.+.... ...+++|+||||||.+++.++.++|+ ++++|+++|...... ........
T Consensus 136 ~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~~~~~~~~ 215 (349)
T PLN02385 136 IPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPLVLQILIL 215 (349)
T ss_pred cCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCchHHHHHHHH
Confidence 12222 567777777775432 23589999999999999999999998 999999998653211 11111111
Q ss_pred hhhhCCcc------c-HHH-HHHHHHHHhhhh--hhc----------ccc--ccchhhcCCCCCCcEEEEeeCCCCccCh
Q 016885 183 YKIRLPKF------T-VKM-AVQYMRRVIQKK--AKF----------DIM--DLNCLKLAPKTFIPALFGHASEDKFIRA 240 (381)
Q Consensus 183 ~~~~~~~~------~-~~~-~~~~~~~~~~~~--~~~----------~~~--~~~~~~~~~~i~~Pvlii~G~~D~~v~~ 240 (381)
.....|.. . ... ............ ..+ ... ..+....+.++++|+|+++|++|.++|+
T Consensus 216 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~P~Lii~G~~D~vv~~ 295 (349)
T PLN02385 216 LANLLPKAKLVPQKDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSLPLLILHGEADKVTDP 295 (349)
T ss_pred HHHHCCCceecCCCccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCCCCEEEEEeCCCCccCh
Confidence 11011100 0 000 000000000000 000 000 0122345678999999999999999999
Q ss_pred HHHHHHHHHcC-CCceEEEeCC-CCCCC--Chhh----HHHHHHHHHHhhcC
Q 016885 241 RHSDLIFNAYA-GDKNIIKFDG-DHNSS--RPQF----YYDSVSIFFYNVLH 284 (381)
Q Consensus 241 ~~~~~l~~~~~-~~~~~~~~~g-gH~~~--~~~~----~~~~i~~fl~~~l~ 284 (381)
+.++.+++.++ ..++++++++ ||... .+++ +.+.+.+||++++.
T Consensus 296 ~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~~ 347 (349)
T PLN02385 296 SVSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHST 347 (349)
T ss_pred HHHHHHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhcc
Confidence 99999999885 3568888987 89854 4544 77889999988764
No 3
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.96 E-value=1.5e-27 Score=219.13 Aligned_cols=250 Identities=20% Similarity=0.284 Sum_probs=167.7
Q ss_pred eeEEEEEEcCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChh-cHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcC-
Q 016885 36 KRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRA-DANEAAVILLPSNITLFTLDFSGSGLSDGDYVS- 113 (381)
Q Consensus 36 ~~~~v~~~~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~-~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~- 113 (381)
+.+...+...||.+|.+..|.|.+ ...++++|||+||++.+.. .+..++..|+++||+|+++|+||||.|.+....
T Consensus 31 ~~~~~~~~~~dg~~l~~~~~~~~~--~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~~~ 108 (330)
T PLN02298 31 KGSKSFFTSPRGLSLFTRSWLPSS--SSPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRAYV 108 (330)
T ss_pred ccccceEEcCCCCEEEEEEEecCC--CCCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCccccC
Confidence 334556788899999999998852 1246789999999986643 456677889999999999999999999753321
Q ss_pred CCcc-hhhHHHHHHHHHHhcC--CCCcEEEEEEchhHHHHHHhhccCCC-ccEEEeccCccCHHH------HHHHHHHHh
Q 016885 114 LGWH-EKDDLKVVVSYLRGNK--QTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFD------LMLELVDVY 183 (381)
Q Consensus 114 ~~~~-~~~d~~~~i~~l~~~~--~~~~i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~~~~------~~~~~~~~~ 183 (381)
.... .++|+.++++++.... ...+++|+||||||.+++.++.++|+ ++++|+++|...... .........
T Consensus 109 ~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 188 (330)
T PLN02298 109 PNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPPWPIPQILTFV 188 (330)
T ss_pred CCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCCchHHHHHHHHH
Confidence 1112 2788999999997642 23579999999999999999999997 999999988653211 011111111
Q ss_pred hhhCCcccH-------H-----HHHHHHHHHhhhhhhcc----------ccc--cchhhcCCCCCCcEEEEeeCCCCccC
Q 016885 184 KIRLPKFTV-------K-----MAVQYMRRVIQKKAKFD----------IMD--LNCLKLAPKTFIPALFGHASEDKFIR 239 (381)
Q Consensus 184 ~~~~~~~~~-------~-----~~~~~~~~~~~~~~~~~----------~~~--~~~~~~~~~i~~Pvlii~G~~D~~v~ 239 (381)
....+.... . .....+... ....+. ... ......+.++++|+|+++|++|.++|
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~ivp 266 (330)
T PLN02298 189 ARFLPTLAIVPTADLLEKSVKVPAKKIIAKR--NPMRYNGKPRLGTVVELLRVTDYLGKKLKDVSIPFIVLHGSADVVTD 266 (330)
T ss_pred HHHCCCCccccCCCcccccccCHHHHHHHHh--CccccCCCccHHHHHHHHHHHHHHHHhhhhcCCCEEEEecCCCCCCC
Confidence 111111000 0 000000000 000000 000 01234567889999999999999999
Q ss_pred hHHHHHHHHHcC-CCceEEEeCC-CCCCC--Ch----hhHHHHHHHHHHhhcCCCCCC
Q 016885 240 ARHSDLIFNAYA-GDKNIIKFDG-DHNSS--RP----QFYYDSVSIFFYNVLHPPQIP 289 (381)
Q Consensus 240 ~~~~~~l~~~~~-~~~~~~~~~g-gH~~~--~~----~~~~~~i~~fl~~~l~~~~~~ 289 (381)
++.++.+++.++ ..++++++++ +|... .+ +.+.+.+.+||.+++.....|
T Consensus 267 ~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~~~~~~~ 324 (330)
T PLN02298 267 PDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERCTGKATP 324 (330)
T ss_pred HHHHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhccCCCCC
Confidence 999999999885 3578889997 89854 34 357778899999988655444
No 4
>PHA02857 monoglyceride lipase; Provisional
Probab=99.96 E-value=4.4e-27 Score=210.74 Aligned_cols=237 Identities=18% Similarity=0.258 Sum_probs=163.7
Q ss_pred EEcCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCC-Ccc-hh
Q 016885 42 IRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSL-GWH-EK 119 (381)
Q Consensus 42 ~~~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~-~~~-~~ 119 (381)
+.+.||..|.+.+|.|. ..+.++|+++||++++...|..+++.|+++||.|+++|+||||.|.+..... .+. .+
T Consensus 5 ~~~~~g~~l~~~~~~~~----~~~~~~v~llHG~~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~ 80 (276)
T PHA02857 5 MFNLDNDYIYCKYWKPI----TYPKALVFISHGAGEHSGRYEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFGVYV 80 (276)
T ss_pred eecCCCCEEEEEeccCC----CCCCEEEEEeCCCccccchHHHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCHHHHH
Confidence 45579999999999884 3556888889999999999999999999999999999999999997643222 222 26
Q ss_pred hHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhhccCCC-ccEEEeccCccCHHH-----HHHHHHHH-h-hhh-CCcc
Q 016885 120 DDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFD-----LMLELVDV-Y-KIR-LPKF 190 (381)
Q Consensus 120 ~d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~~~~-----~~~~~~~~-~-~~~-~~~~ 190 (381)
+|+.+.+++++......+++++||||||.+++.+|.++|+ ++++|+++|...... .+...... . ... ...+
T Consensus 81 ~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (276)
T PHA02857 81 RDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEAVPRLNLLAAKLMGIFYPNKIVGKL 160 (276)
T ss_pred HHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccccccccHHHHHHHHHHHHhCCCCccCCC
Confidence 7777777777665555789999999999999999999998 899999998754211 00101000 0 000 0000
Q ss_pred cHHHHH----HHHHHHhhhhh-----h----ccc--cccchhhcCCCCCCcEEEEeeCCCCccChHHHHHHHHHcCCCce
Q 016885 191 TVKMAV----QYMRRVIQKKA-----K----FDI--MDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKN 255 (381)
Q Consensus 191 ~~~~~~----~~~~~~~~~~~-----~----~~~--~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~ 255 (381)
...... ........... . ... ........+.++++|+|+++|++|.++|++.+..+.+.+....+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~~~~ 240 (276)
T PHA02857 161 CPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTPILILQGTNNEISDVSGAYYFMQHANCNRE 240 (276)
T ss_pred CHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCCCEEEEecCCCCcCChHHHHHHHHHccCCce
Confidence 000000 00000000000 0 000 00012356778999999999999999999999999998865678
Q ss_pred EEEeCC-CCCCC-----ChhhHHHHHHHHHHhh
Q 016885 256 IIKFDG-DHNSS-----RPQFYYDSVSIFFYNV 282 (381)
Q Consensus 256 ~~~~~g-gH~~~-----~~~~~~~~i~~fl~~~ 282 (381)
+.++++ ||... ..+++.+.+.+||+++
T Consensus 241 ~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 241 IKIYEGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred EEEeCCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 888886 99854 2457888899999875
No 5
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.95 E-value=2.3e-27 Score=202.13 Aligned_cols=242 Identities=19% Similarity=0.325 Sum_probs=172.8
Q ss_pred EEEEEcCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCCh-hcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCc-
Q 016885 39 DLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCR-ADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGW- 116 (381)
Q Consensus 39 ~v~~~~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~-~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~- 116 (381)
.-.+.+.+|.+|.+..|.|.. ..+++.+|+++||+++.. ..|..++..|+..||.|+++|++|||.|+|......-
T Consensus 29 ~~~~~n~rG~~lft~~W~p~~--~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~yi~~~ 106 (313)
T KOG1455|consen 29 ESFFTNPRGAKLFTQSWLPLS--GTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHAYVPSF 106 (313)
T ss_pred eeeEEcCCCCEeEEEecccCC--CCCCceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcccCCcH
Confidence 445788999999999999963 347889999999999876 6788899999999999999999999999976443321
Q ss_pred -chhhHHHHHHHHHHhcCCC--CcEEEEEEchhHHHHHHhhccCCC-ccEEEeccCccCHHH------HHHHHHHHhhhh
Q 016885 117 -HEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFD------LMLELVDVYKIR 186 (381)
Q Consensus 117 -~~~~d~~~~i~~l~~~~~~--~~i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~~~~------~~~~~~~~~~~~ 186 (381)
..++|+..-++.++.+... .+.+++||||||.+++.++.++|+ ..|+|+++|.....+ ............
T Consensus 107 d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~v~~~l~~l~~l 186 (313)
T KOG1455|consen 107 DLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPPVISILTLLSKL 186 (313)
T ss_pred HHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcHHHHHHHHHHHh
Confidence 1267777777776665433 788999999999999999999998 899999988774332 122222222222
Q ss_pred CCcccH-------------HHHHHHHHHH-------hhhhhhcccc--ccchhhcCCCCCCcEEEEeeCCCCccChHHHH
Q 016885 187 LPKFTV-------------KMAVQYMRRV-------IQKKAKFDIM--DLNCLKLAPKTFIPALFGHASEDKFIRARHSD 244 (381)
Q Consensus 187 ~~~~~~-------------~~~~~~~~~~-------~~~~~~~~~~--~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~ 244 (381)
+|.+.. ...+...... .+-....++. ..+..+.+.++++|++++||++|.++.++.++
T Consensus 187 iP~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtvPflilHG~dD~VTDp~~Sk 266 (313)
T KOG1455|consen 187 IPTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTVPFLILHGTDDKVTDPKVSK 266 (313)
T ss_pred CCceeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccccccEEEEecCCCcccCcHHHH
Confidence 332210 0000000000 0000000000 12345678899999999999999999999999
Q ss_pred HHHHHc-CCCceEEEeCC-CCCCC------ChhhHHHHHHHHHHhh
Q 016885 245 LIFNAY-AGDKNIIKFDG-DHNSS------RPQFYYDSVSIFFYNV 282 (381)
Q Consensus 245 ~l~~~~-~~~~~~~~~~g-gH~~~------~~~~~~~~i~~fl~~~ 282 (381)
.+++.. ..++++.+||| -|... +.+.+...|++||+++
T Consensus 267 ~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 267 ELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred HHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 999988 46899999999 78733 3457888899999865
No 6
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.95 E-value=1.1e-26 Score=194.20 Aligned_cols=218 Identities=23% Similarity=0.342 Sum_probs=172.8
Q ss_pred eeEEEEEEcCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhcHHHHHHHhcc-CCcEEEEeCCCCCCCCCCCCcCC
Q 016885 36 KRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLP-SNITLFTLDFSGSGLSDGDYVSL 114 (381)
Q Consensus 36 ~~~~v~~~~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~-~G~~vi~~D~~G~G~S~~~~~~~ 114 (381)
..+.+..++.+|..+.+..+.|. ....++|+++||.......+..+...|.. -+++|+++|++|+|.|.|++...
T Consensus 34 ~v~v~~~~t~rgn~~~~~y~~~~----~~~~~~lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~ 109 (258)
T KOG1552|consen 34 FVEVFKVKTSRGNEIVCMYVRPP----EAAHPTLLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSER 109 (258)
T ss_pred ccceEEeecCCCCEEEEEEEcCc----cccceEEEEcCCcccchHHHHHHHHHHhhcccceEEEEecccccccCCCcccc
Confidence 34456678889999999888885 34679999999998777766666666655 38999999999999999998877
Q ss_pred CcchhhHHHHHHHHHHhcCC-CCcEEEEEEchhHHHHHHhhccCCCccEEEeccCccCHHHHHHHHHHHhhhhCCcccHH
Q 016885 115 GWHEKDDLKVVVSYLRGNKQ-TSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVK 193 (381)
Q Consensus 115 ~~~~~~d~~~~i~~l~~~~~-~~~i~l~G~S~GG~~a~~~a~~~p~v~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (381)
+ ..+|+.++.+||++..+ .++|+|+|+|+|...++.+|++.| ++++|+.+|+.+..+.+.......
T Consensus 110 n--~y~Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~-~~alVL~SPf~S~~rv~~~~~~~~---------- 176 (258)
T KOG1552|consen 110 N--LYADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP-LAAVVLHSPFTSGMRVAFPDTKTT---------- 176 (258)
T ss_pred c--chhhHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCC-cceEEEeccchhhhhhhccCcceE----------
Confidence 4 46999999999999984 699999999999999999999999 999999999988766543211100
Q ss_pred HHHHHHHHHhhhhhhccccccchhhcCCCCCCcEEEEeeCCCCccChHHHHHHHHHcCCCceE-EEeCCCCCCC-ChhhH
Q 016885 194 MAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNI-IKFDGDHNSS-RPQFY 271 (381)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~-~~~~ggH~~~-~~~~~ 271 (381)
..++. ....+..+.++||+|++||++|++++..+..+++++.+++.+- ++..+||+.. ...++
T Consensus 177 -------------~~~d~--f~~i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~~epl~v~g~gH~~~~~~~~y 241 (258)
T KOG1552|consen 177 -------------YCFDA--FPNIEKISKITCPVLIIHGTDDEVVDFSHGKALYERCKEKVEPLWVKGAGHNDIELYPEY 241 (258)
T ss_pred -------------Eeecc--ccccCcceeccCCEEEEecccCceecccccHHHHHhccccCCCcEEecCCCcccccCHHH
Confidence 01111 1124677788999999999999999999999999999876444 4444588865 55689
Q ss_pred HHHHHHHHHhhcCC
Q 016885 272 YDSVSIFFYNVLHP 285 (381)
Q Consensus 272 ~~~i~~fl~~~l~~ 285 (381)
.+.+..|+......
T Consensus 242 i~~l~~f~~~~~~~ 255 (258)
T KOG1552|consen 242 IEHLRRFISSVLPS 255 (258)
T ss_pred HHHHHHHHHHhccc
Confidence 99999999776543
No 7
>PRK10749 lysophospholipase L2; Provisional
Probab=99.94 E-value=5e-25 Score=202.00 Aligned_cols=241 Identities=16% Similarity=0.163 Sum_probs=162.2
Q ss_pred eEEEEEEcCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcC---
Q 016885 37 RQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVS--- 113 (381)
Q Consensus 37 ~~~v~~~~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~--- 113 (381)
++...+...+|.++.+..|.|. .+.++||++||++++...|..++..|+++||.|+++|+||||.|++....
T Consensus 30 ~~~~~~~~~~g~~l~~~~~~~~-----~~~~~vll~HG~~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~ 104 (330)
T PRK10749 30 REEAEFTGVDDIPIRFVRFRAP-----HHDRVVVICPGRIESYVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHR 104 (330)
T ss_pred ccceEEEcCCCCEEEEEEccCC-----CCCcEEEEECCccchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCc
Confidence 4456678889999999988652 34579999999999988899999999999999999999999999753221
Q ss_pred ---CCcch-hhHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhhccCCC-ccEEEeccCccCHH-----HHHHHHHHHh
Q 016885 114 ---LGWHE-KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLF-----DLMLELVDVY 183 (381)
Q Consensus 114 ---~~~~~-~~d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~~~-----~~~~~~~~~~ 183 (381)
..+.. ++|+.++++.+....+..+++++||||||.+++.++.++|+ ++++|+++|..... ..........
T Consensus 105 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~ 184 (330)
T PRK10749 105 GHVERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPLPSWMARRILNWA 184 (330)
T ss_pred CccccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCCCcHHHHHHHHHH
Confidence 12222 56777777776655556899999999999999999999998 99999998865321 1111111000
Q ss_pred hh----------------hCCcc------cHHHHHHHHHHHhhhhhh------c----cccc--cchhhcCCCCCCcEEE
Q 016885 184 KI----------------RLPKF------TVKMAVQYMRRVIQKKAK------F----DIMD--LNCLKLAPKTFIPALF 229 (381)
Q Consensus 184 ~~----------------~~~~~------~~~~~~~~~~~~~~~~~~------~----~~~~--~~~~~~~~~i~~Pvli 229 (381)
.. ..+.. .................. + .... ......+.++++|+|+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Li 264 (330)
T PRK10749 185 EGHPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGEQVLAGAGDITTPLLL 264 (330)
T ss_pred HHhcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHHHHHhhccCCCCCEEE
Confidence 00 00000 001111111111111000 0 0000 0123456788999999
Q ss_pred EeeCCCCccChHHHHHHHHHcC------CCceEEEeCC-CCCCC--C---hhhHHHHHHHHHHhh
Q 016885 230 GHASEDKFIRARHSDLIFNAYA------GDKNIIKFDG-DHNSS--R---PQFYYDSVSIFFYNV 282 (381)
Q Consensus 230 i~G~~D~~v~~~~~~~l~~~~~------~~~~~~~~~g-gH~~~--~---~~~~~~~i~~fl~~~ 282 (381)
++|++|.+++++.++.+++.++ ..++++++++ ||... . .+.+.+.+.+||+++
T Consensus 265 i~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 265 LQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNRH 329 (330)
T ss_pred EEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhhc
Confidence 9999999999999998988763 2347888987 99844 2 356788888998753
No 8
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.94 E-value=8.9e-25 Score=204.62 Aligned_cols=232 Identities=16% Similarity=0.191 Sum_probs=163.2
Q ss_pred eeEEEEEEcCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCCh-hcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCC
Q 016885 36 KRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCR-ADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSL 114 (381)
Q Consensus 36 ~~~~v~~~~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~-~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~ 114 (381)
..+.++++..+|..|.++++.|. .+++.|+||++||+++.. ..|..++..|+++||+|+++|+||+|.|.+.....
T Consensus 167 ~~e~v~i~~~~g~~l~g~l~~P~---~~~~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~~~ 243 (414)
T PRK05077 167 ELKELEFPIPGGGPITGFLHLPK---GDGPFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKLTQ 243 (414)
T ss_pred ceEEEEEEcCCCcEEEEEEEECC---CCCCccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCccc
Confidence 44578888888889999999996 346789999988888765 45667788999999999999999999997543211
Q ss_pred CcchhhHHHHHHHHHHhcCC--CCcEEEEEEchhHHHHHHhhccCCC-ccEEEeccCccCHHH----HHHH----HHHHh
Q 016885 115 GWHEKDDLKVVVSYLRGNKQ--TSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFD----LMLE----LVDVY 183 (381)
Q Consensus 115 ~~~~~~d~~~~i~~l~~~~~--~~~i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~~~~----~~~~----~~~~~ 183 (381)
.......++++++..... .++|+++||||||++++.+|..+|+ ++++|++++...... .... ..+..
T Consensus 244 --d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~~~~~~~~p~~~~~~l 321 (414)
T PRK05077 244 --DSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTDPKRQQQVPEMYLDVL 321 (414)
T ss_pred --cHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhcchhhhhhchHHHHHHH
Confidence 112334578899988753 4899999999999999999998885 999999988764211 0000 00000
Q ss_pred hh--hCCcccHHHHHHHHHHHhhhhhhccccccchhhc-CCCCCCcEEEEeeCCCCccChHHHHHHHHHcCCCceEEEeC
Q 016885 184 KI--RLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKL-APKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFD 260 (381)
Q Consensus 184 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~ 260 (381)
.. ..+..........+ ..+.. ..... ..++++|+|+++|++|+++|.+.++.+.+..++ .++++++
T Consensus 322 a~~lg~~~~~~~~l~~~l-------~~~sl---~~~~~l~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~~-~~l~~i~ 390 (414)
T PRK05077 322 ASRLGMHDASDEALRVEL-------NRYSL---KVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLIASSSAD-GKLLEIP 390 (414)
T ss_pred HHHhCCCCCChHHHHHHh-------hhccc---hhhhhhccCCCCcEEEEecCCCCCCCHHHHHHHHHhCCC-CeEEEcc
Confidence 00 00000101000000 01111 01111 256889999999999999999999988877755 4788888
Q ss_pred CCCCCCChhhHHHHHHHHHHhhc
Q 016885 261 GDHNSSRPQFYYDSVSIFFYNVL 283 (381)
Q Consensus 261 ggH~~~~~~~~~~~i~~fl~~~l 283 (381)
+.|....++++.+.+.+||+++|
T Consensus 391 ~~~~~e~~~~~~~~i~~wL~~~l 413 (414)
T PRK05077 391 FKPVYRNFDKALQEISDWLEDRL 413 (414)
T ss_pred CCCccCCHHHHHHHHHHHHHHHh
Confidence 87877889999999999998876
No 9
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.94 E-value=4e-25 Score=205.34 Aligned_cols=244 Identities=18% Similarity=0.251 Sum_probs=169.5
Q ss_pred eEEEEEEcCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCC-C
Q 016885 37 RQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSL-G 115 (381)
Q Consensus 37 ~~~v~~~~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~-~ 115 (381)
..+..+...++..+.+..|.|. .+.++++||++||++++...|..++..|+++||.|+++|+||||.|++..... .
T Consensus 110 ~~~~~~~~~~~~~l~~~~~~p~---~~~~~~~Vl~lHG~~~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~ 186 (395)
T PLN02652 110 WATSLFYGARRNALFCRSWAPA---AGEMRGILIIIHGLNEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGYVPS 186 (395)
T ss_pred EEEEEEECCCCCEEEEEEecCC---CCCCceEEEEECCchHHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCcC
Confidence 4566788899999999999885 24567899999999998888999999999999999999999999998753221 2
Q ss_pred cc-hhhHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhhccCC----CccEEEeccCccCHHH---HHHHHHHHhhhhC
Q 016885 116 WH-EKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDP----SIAGMVLDSAFSDLFD---LMLELVDVYKIRL 187 (381)
Q Consensus 116 ~~-~~~d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~p----~v~~vi~~~~~~~~~~---~~~~~~~~~~~~~ 187 (381)
+. ..+|+.++++++....+..+++++||||||.+++.++. +| .++++|+.+|...... .............
T Consensus 187 ~~~~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~~~~~~~~~l~~~~~ 265 (395)
T PLN02652 187 LDYVVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAHPIVGAVAPIFSLVA 265 (395)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccchHHHHHHHHHHHHhC
Confidence 22 26789999999987655568999999999999998765 44 3899999998754321 1100101111111
Q ss_pred CcccH--------------HHHHHHHHH-H-----hhhhhhcccccc--chhhcCCCCCCcEEEEeeCCCCccChHHHHH
Q 016885 188 PKFTV--------------KMAVQYMRR-V-----IQKKAKFDIMDL--NCLKLAPKTFIPALFGHASEDKFIRARHSDL 245 (381)
Q Consensus 188 ~~~~~--------------~~~~~~~~~-~-----~~~~~~~~~~~~--~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~ 245 (381)
|.+.. ......... . ............ .....+.++++|+|++||++|.++|++.++.
T Consensus 266 p~~~~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~vPvLIi~G~~D~vvp~~~a~~ 345 (395)
T PLN02652 266 PRFQFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVPFMVLHGTADRVTDPLASQD 345 (395)
T ss_pred CCCcccCcccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccCCCCEEEEEeCCCCCCCHHHHHH
Confidence 11100 000000000 0 000000000000 1234567889999999999999999999999
Q ss_pred HHHHcCC-CceEEEeCC-CCCCC---ChhhHHHHHHHHHHhhcC
Q 016885 246 IFNAYAG-DKNIIKFDG-DHNSS---RPQFYYDSVSIFFYNVLH 284 (381)
Q Consensus 246 l~~~~~~-~~~~~~~~g-gH~~~---~~~~~~~~i~~fl~~~l~ 284 (381)
+++.+.. .++++++++ +|... .++++.+.+.+||.+++.
T Consensus 346 l~~~~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~~~ 389 (395)
T PLN02652 346 LYNEAASRHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKRLD 389 (395)
T ss_pred HHHhcCCCCceEEEECCCeEEeccCCCHHHHHHHHHHHHHHHhh
Confidence 9998754 578889998 78742 578999999999998874
No 10
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.94 E-value=4.7e-26 Score=184.77 Aligned_cols=213 Identities=18% Similarity=0.217 Sum_probs=159.4
Q ss_pred CCcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcch-hhHHHHHHHHHHhcCCCCcEEEEEE
Q 016885 65 PLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE-KDDLKVVVSYLRGNKQTSRIGLWGR 143 (381)
Q Consensus 65 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~-~~d~~~~i~~l~~~~~~~~i~l~G~ 143 (381)
...+||++||+.|+....+.+++.|.++||.|.+|.+||||.....+...++.+ .+|+.+..++|.+. +.+.|.++|.
T Consensus 14 G~~AVLllHGFTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~-gy~eI~v~Gl 92 (243)
T COG1647 14 GNRAVLLLHGFTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEA-GYDEIAVVGL 92 (243)
T ss_pred CCEEEEEEeccCCCcHHHHHHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHc-CCCeEEEEee
Confidence 348999999999999999999999999999999999999999887666666554 68888899999866 6699999999
Q ss_pred chhHHHHHHhhccCCCccEEEeccCccCHHHH---HH---HHHHHhhhhCCcccHHHHHHHHHHHh----hhhhhccccc
Q 016885 144 SMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDL---ML---ELVDVYKIRLPKFTVKMAVQYMRRVI----QKKAKFDIMD 213 (381)
Q Consensus 144 S~GG~~a~~~a~~~p~v~~vi~~~~~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 213 (381)
||||.+++.+|..+| ++++|.+|+....... .. .+.+... .++..........+.... .....+.-.-
T Consensus 93 SmGGv~alkla~~~p-~K~iv~m~a~~~~k~~~~iie~~l~y~~~~k-k~e~k~~e~~~~e~~~~~~~~~~~~~~~~~~i 170 (243)
T COG1647 93 SMGGVFALKLAYHYP-PKKIVPMCAPVNVKSWRIIIEGLLEYFRNAK-KYEGKDQEQIDKEMKSYKDTPMTTTAQLKKLI 170 (243)
T ss_pred cchhHHHHHHHhhCC-ccceeeecCCcccccchhhhHHHHHHHHHhh-hccCCCHHHHHHHHHHhhcchHHHHHHHHHHH
Confidence 999999999999999 9999999988764321 11 1111111 112222222222222211 1111111111
Q ss_pred cchhhcCCCCCCcEEEEeeCCCCccChHHHHHHHHHc-CCCceEEEeCC-CCCCC---ChhhHHHHHHHHHH
Q 016885 214 LNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAY-AGDKNIIKFDG-DHNSS---RPQFYYDSVSIFFY 280 (381)
Q Consensus 214 ~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~-~~~~~~~~~~g-gH~~~---~~~~~~~~i~~fl~ 280 (381)
......+..|..|++++.|.+|+.+|.+.+..+++.. +.++++.++++ ||... ..+.+.+.+..||+
T Consensus 171 ~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D~Erd~v~e~V~~FL~ 242 (243)
T COG1647 171 KDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHVITLDKERDQVEEDVITFLE 242 (243)
T ss_pred HHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCceeecchhHHHHHHHHHHHhh
Confidence 1334667788999999999999999999999999998 56789999998 89855 66788999999986
No 11
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.93 E-value=1.4e-24 Score=194.38 Aligned_cols=226 Identities=13% Similarity=0.166 Sum_probs=149.2
Q ss_pred CCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcch-hhHHH
Q 016885 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE-KDDLK 123 (381)
Q Consensus 45 ~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~-~~d~~ 123 (381)
.+|.++++..+. ++...+.|||+||++++...|..+++.|.+ +|+|+++|+||||.|+.......+.. .+++.
T Consensus 9 ~~~~~~~~~~~~-----~~~~~~plvllHG~~~~~~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~ 82 (276)
T TIGR02240 9 LDGQSIRTAVRP-----GKEGLTPLLIFNGIGANLELVFPFIEALDP-DLEVIAFDVPGVGGSSTPRHPYRFPGLAKLAA 82 (276)
T ss_pred cCCcEEEEEEec-----CCCCCCcEEEEeCCCcchHHHHHHHHHhcc-CceEEEECCCCCCCCCCCCCcCcHHHHHHHHH
Confidence 577788765431 122347899999999999999999998876 69999999999999975433222222 34444
Q ss_pred HHHHHHHhcCCCCcEEEEEEchhHHHHHHhhccCCC-ccEEEeccCccCHH------HHHHHHHHHhhhhCCcc------
Q 016885 124 VVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLF------DLMLELVDVYKIRLPKF------ 190 (381)
Q Consensus 124 ~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~~~------~~~~~~~~~~~~~~~~~------ 190 (381)
++++.+ +.++++|+||||||.+++.+|.++|+ ++++|++++..... ..............+..
T Consensus 83 ~~i~~l----~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (276)
T TIGR02240 83 RMLDYL----DYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKVLMMMASPRRYIQPSHGIHIAP 158 (276)
T ss_pred HHHHHh----CcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCchhHHHHhcCchhhhccccccchhh
Confidence 444444 66899999999999999999999998 99999998765321 11000000000000000
Q ss_pred ---------cHHHHHHHHHHHhhhhhh-------ccccccchhhcCCCCCCcEEEEeeCCCCccChHHHHHHHHHcCCCc
Q 016885 191 ---------TVKMAVQYMRRVIQKKAK-------FDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDK 254 (381)
Q Consensus 191 ---------~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~ 254 (381)
........... ...... ...........+.++++|+|+++|++|++++++.++.+.+.++..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~~~~~~~- 236 (276)
T TIGR02240 159 DIYGGAFRRDPELAMAHASK-VRSGGKLGYYWQLFAGLGWTSIHWLHKIQQPTLVLAGDDDPIIPLINMRLLAWRIPNA- 236 (276)
T ss_pred hhccceeeccchhhhhhhhh-cccCCCchHHHHHHHHcCCchhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHHHhCCCC-
Confidence 00000000000 000000 000011122446789999999999999999999999999998764
Q ss_pred eEEEeCCCCCCC--ChhhHHHHHHHHHHhh
Q 016885 255 NIIKFDGDHNSS--RPQFYYDSVSIFFYNV 282 (381)
Q Consensus 255 ~~~~~~ggH~~~--~~~~~~~~i~~fl~~~ 282 (381)
+++++++||... .++++.+.+.+|+++.
T Consensus 237 ~~~~i~~gH~~~~e~p~~~~~~i~~fl~~~ 266 (276)
T TIGR02240 237 ELHIIDDGHLFLITRAEAVAPIIMKFLAEE 266 (276)
T ss_pred EEEEEcCCCchhhccHHHHHHHHHHHHHHh
Confidence 677778899844 7889999999999764
No 12
>PLN02511 hydrolase
Probab=99.93 E-value=6.9e-24 Score=197.84 Aligned_cols=270 Identities=16% Similarity=0.132 Sum_probs=170.1
Q ss_pred CCCCCcccccccccc---------ccCcceeeEEEEEEcCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhc-H-H
Q 016885 15 AEYNPDQYLWERDFM---------LAGRSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD-A-N 83 (381)
Q Consensus 15 ~~~~~~~~~~~~~~~---------~~~~~~~~~~v~~~~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~-~-~ 83 (381)
..|.|+.++.+..++ .....|+++ .+...||..+...++.+.........|+||++||++++... | .
T Consensus 42 ~~y~p~~wl~n~h~qT~~~~~~~~~~~~~~~re--~l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~ 119 (388)
T PLN02511 42 RPYDAFPLLGNRHVETIFASFFRSLPAVRYRRE--CLRTPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVR 119 (388)
T ss_pred CCccCCccCCCccHHHhhHHHhcCCCCCceeEE--EEECCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHH
Confidence 368888777777655 234456655 46678998888765543211123457899999999876644 4 4
Q ss_pred HHHHHhccCCcEEEEeCCCCCCCCCCCCcC-CCcchhhHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhhccCCC---
Q 016885 84 EAAVILLPSNITLFTLDFSGSGLSDGDYVS-LGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS--- 159 (381)
Q Consensus 84 ~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~-~~~~~~~d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~--- 159 (381)
.++..+.++||+|+++|+||||.|...... ......+|+.++++++....+..+++++||||||.+++.++.++++
T Consensus 120 ~~~~~~~~~g~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~ 199 (388)
T PLN02511 120 HMLLRARSKGWRVVVFNSRGCADSPVTTPQFYSASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENCP 199 (388)
T ss_pred HHHHHHHHCCCEEEEEecCCCCCCCCCCcCEEcCCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCCC
Confidence 567777788999999999999999753211 1112368999999999987766799999999999999999998875
Q ss_pred ccEEEeccCccCHHHHHHHHHH------------Hhh-------hhC---C-cccHHH------HHHHHHHHhhhhhhcc
Q 016885 160 IAGMVLDSAFSDLFDLMLELVD------------VYK-------IRL---P-KFTVKM------AVQYMRRVIQKKAKFD 210 (381)
Q Consensus 160 v~~vi~~~~~~~~~~~~~~~~~------------~~~-------~~~---~-~~~~~~------~~~~~~~~~~~~~~~~ 210 (381)
+.+++++++..++......+.. ... ..+ + .+.... ..++..........+.
T Consensus 200 v~~~v~is~p~~l~~~~~~~~~~~~~~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~ 279 (388)
T PLN02511 200 LSGAVSLCNPFDLVIADEDFHKGFNNVYDKALAKALRKIFAKHALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVSFGFK 279 (388)
T ss_pred ceEEEEECCCcCHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhcCCCC
Confidence 7788877766554211100000 000 000 0 000000 0001000000001111
Q ss_pred -----ccccchhhcCCCCCCcEEEEeeCCCCccChHHH-HHHHHHcCCCceEEEeCC-CCCCC--Chhh------HHHHH
Q 016885 211 -----IMDLNCLKLAPKTFIPALFGHASEDKFIRARHS-DLIFNAYAGDKNIIKFDG-DHNSS--RPQF------YYDSV 275 (381)
Q Consensus 211 -----~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~-~~l~~~~~~~~~~~~~~g-gH~~~--~~~~------~~~~i 275 (381)
+...+....+.++++|+|+|+|.+|+++|.+.. ..+.+..++ .+++++++ ||... .++. +.+.+
T Consensus 280 ~~~~yy~~~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~~p~-~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i 358 (388)
T PLN02511 280 SVDAYYSNSSSSDSIKHVRVPLLCIQAANDPIAPARGIPREDIKANPN-CLLIVTPSGGHLGWVAGPEAPFGAPWTDPVV 358 (388)
T ss_pred CHHHHHHHcCchhhhccCCCCeEEEEcCCCCcCCcccCcHhHHhcCCC-EEEEECCCcceeccccCCCCCCCCccHHHHH
Confidence 012234457788999999999999999997754 344444444 46777775 99844 3433 47888
Q ss_pred HHHHHhhcCCCC
Q 016885 276 SIFFYNVLHPPQ 287 (381)
Q Consensus 276 ~~fl~~~l~~~~ 287 (381)
.+||+.......
T Consensus 359 ~~Fl~~~~~~~~ 370 (388)
T PLN02511 359 MEFLEALEEGKS 370 (388)
T ss_pred HHHHHHHHHhcc
Confidence 899988765443
No 13
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.93 E-value=5.4e-24 Score=193.13 Aligned_cols=245 Identities=13% Similarity=0.120 Sum_probs=151.9
Q ss_pred cCcceeeEEEEEEcCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCC
Q 016885 31 AGRSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGD 110 (381)
Q Consensus 31 ~~~~~~~~~v~~~~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~ 110 (381)
.++++....+.+...+|.++... |... +.+..|+|||+||++++...|..++..|.+.||+|+++|+||||.|+..
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~i~-y~~~---G~~~~~~lvliHG~~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~ 90 (302)
T PRK00870 15 PDYPFAPHYVDVDDGDGGPLRMH-YVDE---GPADGPPVLLLHGEPSWSYLYRKMIPILAAAGHRVIAPDLIGFGRSDKP 90 (302)
T ss_pred cCCCCCceeEeecCCCCceEEEE-EEec---CCCCCCEEEEECCCCCchhhHHHHHHHHHhCCCEEEEECCCCCCCCCCC
Confidence 34466666677776566654432 2222 2234679999999999999999999999888999999999999999754
Q ss_pred CcCCCcchhhHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhhccCCC-ccEEEeccCccCHH-----HHHHHHHHHhh
Q 016885 111 YVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLF-----DLMLELVDVYK 184 (381)
Q Consensus 111 ~~~~~~~~~~d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~~~-----~~~~~~~~~~~ 184 (381)
.....+. .++..+.+..+.+..+.++++++||||||.+++.+|.++|+ +++++++++..... ........ ..
T Consensus 91 ~~~~~~~-~~~~a~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~-~~ 168 (302)
T PRK00870 91 TRREDYT-YARHVEWMRSWFEQLDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMPDAFWAWRA-FS 168 (302)
T ss_pred CCcccCC-HHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccchHHHhhhhc-cc
Confidence 3211111 23333333333333367899999999999999999999998 99999988642211 00000000 00
Q ss_pred hhCC--------------cccHHHHHHHHH--------HHhhhhhhc---cc------cccchhhcCCCCCCcEEEEeeC
Q 016885 185 IRLP--------------KFTVKMAVQYMR--------RVIQKKAKF---DI------MDLNCLKLAPKTFIPALFGHAS 233 (381)
Q Consensus 185 ~~~~--------------~~~~~~~~~~~~--------~~~~~~~~~---~~------~~~~~~~~~~~i~~Pvlii~G~ 233 (381)
...+ .........+.. ......... .. ........+.++++|+++++|+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~ 248 (302)
T PRK00870 169 QYSPVLPVGRLVNGGTVRDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLERWDKPFLTAFSD 248 (302)
T ss_pred ccCchhhHHHHhhccccccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcCCCceEEEecC
Confidence 0000 000000110000 000000000 00 0001123467899999999999
Q ss_pred CCCccChHHHHHHHHHcCCCc--eEEEeCC-CCCCC--ChhhHHHHHHHHHHhh
Q 016885 234 EDKFIRARHSDLIFNAYAGDK--NIIKFDG-DHNSS--RPQFYYDSVSIFFYNV 282 (381)
Q Consensus 234 ~D~~v~~~~~~~l~~~~~~~~--~~~~~~g-gH~~~--~~~~~~~~i~~fl~~~ 282 (381)
+|.++|... +.+.+.+++.. .++++++ ||... .++++.+.+.+||+++
T Consensus 249 ~D~~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 249 SDPITGGGD-AILQKRIPGAAGQPHPTIKGAGHFLQEDSGEELAEAVLEFIRAT 301 (302)
T ss_pred CCCcccCch-HHHHhhcccccccceeeecCCCccchhhChHHHHHHHHHHHhcC
Confidence 999999766 77888887542 3677776 99854 7889999999999754
No 14
>PRK10566 esterase; Provisional
Probab=99.92 E-value=1e-23 Score=185.92 Aligned_cols=220 Identities=20% Similarity=0.219 Sum_probs=144.8
Q ss_pred EEEEEEeecCCCCCCCCCcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCC---C-c----chhh
Q 016885 49 VLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSL---G-W----HEKD 120 (381)
Q Consensus 49 ~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~---~-~----~~~~ 120 (381)
.+...++.|.+ ..+++.|+||++||++++...+..+++.|+++||.|+++|+||+|.+....... . | ...+
T Consensus 11 ~~~~~~~~p~~-~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~ 89 (249)
T PRK10566 11 GIEVLHAFPAG-QRDTPLPTVFFYHGFTSSKLVYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQ 89 (249)
T ss_pred CcceEEEcCCC-CCCCCCCEEEEeCCCCcccchHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHH
Confidence 34455677753 123467999999999999888999999999999999999999999763221111 1 1 1256
Q ss_pred HHHHHHHHHHhcCC--CCcEEEEEEchhHHHHHHhhccCCCccEEEeccCccCHHHHHHHHHHHhhhhCCcccH--HHHH
Q 016885 121 DLKVVVSYLRGNKQ--TSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTV--KMAV 196 (381)
Q Consensus 121 d~~~~i~~l~~~~~--~~~i~l~G~S~GG~~a~~~a~~~p~v~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 196 (381)
|+.++++++.+... .++|+++||||||.+++.++.++|++.+.+.+.+........... .+.... ....
T Consensus 90 ~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ 162 (249)
T PRK10566 90 EFPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGYFTSLARTL-------FPPLIPETAAQQ 162 (249)
T ss_pred HHHHHHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHHHHHHHHHh-------cccccccccccH
Confidence 77788888887643 379999999999999999999998866555433321111111000 110000 0000
Q ss_pred HHHHHHhhhhhhccccccchhhcCCCC-CCcEEEEeeCCCCccChHHHHHHHHHcCC-----CceEEEeCC-CCCCCChh
Q 016885 197 QYMRRVIQKKAKFDIMDLNCLKLAPKT-FIPALFGHASEDKFIRARHSDLIFNAYAG-----DKNIIKFDG-DHNSSRPQ 269 (381)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~Pvlii~G~~D~~v~~~~~~~l~~~~~~-----~~~~~~~~g-gH~~~~~~ 269 (381)
........... ..+....+.++ ++|+|++||++|.++|++.++.+++.+.. ..+++.+++ ||... .
T Consensus 163 ~~~~~~~~~~~-----~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~~--~ 235 (249)
T PRK10566 163 AEFNNIVAPLA-----EWEVTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRHRIT--P 235 (249)
T ss_pred HHHHHHHHHHh-----hcChhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCccC--H
Confidence 01111111111 11222344555 69999999999999999999999988843 246667787 99865 4
Q ss_pred hHHHHHHHHHHhhc
Q 016885 270 FYYDSVSIFFYNVL 283 (381)
Q Consensus 270 ~~~~~i~~fl~~~l 283 (381)
...+.+.+||++++
T Consensus 236 ~~~~~~~~fl~~~~ 249 (249)
T PRK10566 236 EALDAGVAFFRQHL 249 (249)
T ss_pred HHHHHHHHHHHhhC
Confidence 57889999998764
No 15
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.92 E-value=1.1e-24 Score=175.47 Aligned_cols=231 Identities=18% Similarity=0.337 Sum_probs=178.5
Q ss_pred cCcceeeEEEEEEcCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhcHHHHHHH-hccCCcEEEEeCCCCCCCCCC
Q 016885 31 AGRSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVI-LLPSNITLFTLDFSGSGLSDG 109 (381)
Q Consensus 31 ~~~~~~~~~v~~~~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~-l~~~G~~vi~~D~~G~G~S~~ 109 (381)
.-..++.+++++.+.|..+|.+++... ..+.|+++++||..|+.......+.. +.+.+.+|+.+++||+|.|+|
T Consensus 48 ~~~n~pye~i~l~T~D~vtL~a~~~~~-----E~S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~G 122 (300)
T KOG4391|consen 48 KEFNMPYERIELRTRDKVTLDAYLMLS-----ESSRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEG 122 (300)
T ss_pred cccCCCceEEEEEcCcceeEeeeeecc-----cCCCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccCCC
Confidence 334566668899999999999887652 35899999999999999887777764 445589999999999999999
Q ss_pred CCcCCCcchhhHHHHHHHHHHhcCCC--CcEEEEEEchhHHHHHHhhccCCC-ccEEEeccCccCHHHHHHHHHHHhhhh
Q 016885 110 DYVSLGWHEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIR 186 (381)
Q Consensus 110 ~~~~~~~~~~~d~~~~i~~l~~~~~~--~~i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~~~~~~~~~~~~~~~~ 186 (381)
.+...+. ..|..++++|+..+... .+++++|.|+||.+|+.+|+++.+ +.++|+-+.+.+...........
T Consensus 123 spsE~GL--~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i~~v~p---- 196 (300)
T KOG4391|consen 123 SPSEEGL--KLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAIPLVFP---- 196 (300)
T ss_pred Cccccce--eccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhhhhheecc----
Confidence 9887765 47899999999998765 789999999999999999999887 99999999988775443322211
Q ss_pred CCcccHHHHHHHHHHHhhhhhhccccccchhhcCCCCCCcEEEEeeCCCCccChHHHHHHHHHcCC-CceEEEeCC-CCC
Q 016885 187 LPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAG-DKNIIKFDG-DHN 264 (381)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~-~~~~~~~~g-gH~ 264 (381)
+..+....+... ... .....+.+.+.|.|++.|.+|.+||+...+.+++..+. .+++..||+ .|+
T Consensus 197 ---~~~k~i~~lc~k----n~~------~S~~ki~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~gtHN 263 (300)
T KOG4391|consen 197 ---FPMKYIPLLCYK----NKW------LSYRKIGQCRMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEFPDGTHN 263 (300)
T ss_pred ---chhhHHHHHHHH----hhh------cchhhhccccCceEEeecCccccCCcHHHHHHHHhCchhhhhheeCCCCccC
Confidence 111111111111 000 11133445678999999999999999999999999965 578889986 798
Q ss_pred CC-ChhhHHHHHHHHHHhhcCC
Q 016885 265 SS-RPQFYYDSVSIFFYNVLHP 285 (381)
Q Consensus 265 ~~-~~~~~~~~i~~fl~~~l~~ 285 (381)
.. ..+.+++.|.+||.+....
T Consensus 264 DT~i~dGYfq~i~dFlaE~~~~ 285 (300)
T KOG4391|consen 264 DTWICDGYFQAIEDFLAEVVKS 285 (300)
T ss_pred ceEEeccHHHHHHHHHHHhccC
Confidence 66 5678999999999987654
No 16
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.92 E-value=9.9e-24 Score=188.75 Aligned_cols=243 Identities=22% Similarity=0.270 Sum_probs=170.3
Q ss_pred EEEEEEcCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCCC-CCCcCCC-
Q 016885 38 QDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSD-GDYVSLG- 115 (381)
Q Consensus 38 ~~v~~~~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~-~~~~~~~- 115 (381)
.+-.+...||..+.+..|.+. ..+..+||++||++.+...|..++..|..+||.|+++|+||||.|. +......
T Consensus 10 ~~~~~~~~d~~~~~~~~~~~~----~~~~g~Vvl~HG~~Eh~~ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~~ 85 (298)
T COG2267 10 TEGYFTGADGTRLRYRTWAAP----EPPKGVVVLVHGLGEHSGRYEELADDLAARGFDVYALDLRGHGRSPRGQRGHVDS 85 (298)
T ss_pred ccceeecCCCceEEEEeecCC----CCCCcEEEEecCchHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCchh
Confidence 345688899999999999774 2334899999999999999999999999999999999999999997 3332221
Q ss_pred cch-hhHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhhccCCC-ccEEEeccCccCHHH--HHHHHHH----HhhhhC
Q 016885 116 WHE-KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFD--LMLELVD----VYKIRL 187 (381)
Q Consensus 116 ~~~-~~d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~~~~--~~~~~~~----~~~~~~ 187 (381)
+.. ..|+...++.+.......+++++||||||.+++.++.+++. ++++|+.+|+..+.. ....... ......
T Consensus 86 f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~~~~~~~~~~~~~~~~~~ 165 (298)
T COG2267 86 FADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGGAILRLILARLALKLLGRIR 165 (298)
T ss_pred HHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCChhHHHHHHHHHhcccccccc
Confidence 222 67888888888776556899999999999999999999986 999999999987762 1111111 111112
Q ss_pred CcccHHH----------H---HHHHHHHhhhhh-hc------------cccccchhhcCCCCCCcEEEEeeCCCCccC-h
Q 016885 188 PKFTVKM----------A---VQYMRRVIQKKA-KF------------DIMDLNCLKLAPKTFIPALFGHASEDKFIR-A 240 (381)
Q Consensus 188 ~~~~~~~----------~---~~~~~~~~~~~~-~~------------~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~-~ 240 (381)
|.+.... . ............ .+ .............+++|+|+++|++|.+++ .
T Consensus 166 p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~g~~D~vv~~~ 245 (298)
T COG2267 166 PKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQGGDDRVVDNV 245 (298)
T ss_pred cccccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhccccccCCEEEEecCCCccccCc
Confidence 2221111 0 000000000000 00 000011223456788999999999999999 7
Q ss_pred HHHHHHHHHcCCC-ceEEEeCC-CCCCC---Ch--hhHHHHHHHHHHhhcC
Q 016885 241 RHSDLIFNAYAGD-KNIIKFDG-DHNSS---RP--QFYYDSVSIFFYNVLH 284 (381)
Q Consensus 241 ~~~~~l~~~~~~~-~~~~~~~g-gH~~~---~~--~~~~~~i~~fl~~~l~ 284 (381)
+...+++++++.. +++++++| .|... .. +++.+.+.+|+.+...
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~~~ 296 (298)
T COG2267 246 EGLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEALP 296 (298)
T ss_pred HHHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhhcc
Confidence 8888888888643 68899998 78633 33 7888889999987654
No 17
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.92 E-value=5.1e-24 Score=209.64 Aligned_cols=239 Identities=19% Similarity=0.233 Sum_probs=176.1
Q ss_pred eeeEEEEEEcCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhc--HHHHHHHhccCCcEEEEeCCCCCCCCC----
Q 016885 35 YKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD--ANEAAVILLPSNITLFTLDFSGSGLSD---- 108 (381)
Q Consensus 35 ~~~~~v~~~~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~--~~~~~~~l~~~G~~vi~~D~~G~G~S~---- 108 (381)
.+.+.+++...||.++.++++.|.+....++.|+||++||+...... +....+.|+.+||.|+.+|+||.+.-.
T Consensus 363 ~~~e~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~ 442 (620)
T COG1506 363 AEPEPVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFA 442 (620)
T ss_pred CCceEEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHH
Confidence 46678899999999999999999875555567999999999854443 667788999999999999999875432
Q ss_pred -CCCcCCCcchhhHHHHHHHHHHhcCCC--CcEEEEEEchhHHHHHHhhccCCCccEEEeccCccCHHHHHHHHHHHhhh
Q 016885 109 -GDYVSLGWHEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKI 185 (381)
Q Consensus 109 -~~~~~~~~~~~~d~~~~i~~l~~~~~~--~~i~l~G~S~GG~~a~~~a~~~p~v~~vi~~~~~~~~~~~~~~~~~~~~~ 185 (381)
......+..+.+|+.++++++.+.... +|++|+|+|+||++++.++.+.+.+++.+...+..+...........+..
T Consensus 443 ~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~~f~a~~~~~~~~~~~~~~~~~~~~~~~ 522 (620)
T COG1506 443 DAIRGDWGGVDLEDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAATKTPRFKAAVAVAGGVDWLLYFGESTEGLRF 522 (620)
T ss_pred HhhhhccCCccHHHHHHHHHHHHhCCCcChHHeEEeccChHHHHHHHHHhcCchhheEEeccCcchhhhhccccchhhcC
Confidence 222233445689999999988877655 59999999999999999999999888877777655433322111110000
Q ss_pred hCCcccHHHHHHHHHHHhhhh--hhccccccchhhcCCCCCCcEEEEeeCCCCccChHHHHHHHHHc---CCCceEEEeC
Q 016885 186 RLPKFTVKMAVQYMRRVIQKK--AKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAY---AGDKNIIKFD 260 (381)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~---~~~~~~~~~~ 260 (381)
.. ....... ....+...++.....++++|+|+|||+.|..||.+++.++++++ +...++++++
T Consensus 523 ~~------------~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p 590 (620)
T COG1506 523 DP------------EENGGGPPEDREKYEDRSPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFP 590 (620)
T ss_pred CH------------HHhCCCcccChHHHHhcChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeC
Confidence 00 0000000 01112234666788899999999999999999999999999988 3467889998
Q ss_pred C-CCCCCCh---hhHHHHHHHHHHhhcCC
Q 016885 261 G-DHNSSRP---QFYYDSVSIFFYNVLHP 285 (381)
Q Consensus 261 g-gH~~~~~---~~~~~~i~~fl~~~l~~ 285 (381)
+ +|.+..+ ....+.+.+|++++++.
T Consensus 591 ~e~H~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (620)
T COG1506 591 DEGHGFSRPENRVKVLKEILDWFKRHLKQ 619 (620)
T ss_pred CCCcCCCCchhHHHHHHHHHHHHHHHhcC
Confidence 7 9997754 46778888999998864
No 18
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.92 E-value=4.4e-23 Score=185.33 Aligned_cols=211 Identities=16% Similarity=0.158 Sum_probs=135.5
Q ss_pred CCcEEEEeCCCCCChhcHHH---HHHHhccCCcEEEEeCCCCCCCCCCCCcCC--CcchhhHHHHHHHHHHhcCCCCcEE
Q 016885 65 PLPCVVYCHGNSGCRADANE---AAVILLPSNITLFTLDFSGSGLSDGDYVSL--GWHEKDDLKVVVSYLRGNKQTSRIG 139 (381)
Q Consensus 65 ~~p~vv~~HG~~~~~~~~~~---~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~--~~~~~~d~~~~i~~l~~~~~~~~i~ 139 (381)
..|.||++||++++...|.. .+..+++.||+|+++|+||||.|+...... .....+++.++++.+ +.++++
T Consensus 29 ~~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l----~~~~~~ 104 (282)
T TIGR03343 29 NGEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDAL----DIEKAH 104 (282)
T ss_pred CCCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccchhHHHHHHHHHHc----CCCCee
Confidence 45789999999987766653 345677779999999999999997543211 111234444444443 678999
Q ss_pred EEEEchhHHHHHHhhccCCC-ccEEEeccCccCHH--------HHHHHHHHHhh------------hh-C-Cc-ccHHHH
Q 016885 140 LWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLF--------DLMLELVDVYK------------IR-L-PK-FTVKMA 195 (381)
Q Consensus 140 l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~~~--------~~~~~~~~~~~------------~~-~-~~-~~~~~~ 195 (381)
++||||||.+++.++.++|+ ++++|++++..... .........+. .. . +. ......
T Consensus 105 lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (282)
T TIGR03343 105 LVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYETLKQMLNVFLFDQSLITEELL 184 (282)
T ss_pred EEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHHHhcCCCHHHHHHHHhhCccCcccCcHHHH
Confidence 99999999999999999997 99999988642100 00011110000 00 0 00 000000
Q ss_pred HHHHH----------HHhhhhhhccccccchhhcCCCCCCcEEEEeeCCCCccChHHHHHHHHHcCCCceEEEeCC-CCC
Q 016885 196 VQYMR----------RVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHN 264 (381)
Q Consensus 196 ~~~~~----------~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~g-gH~ 264 (381)
..... ..............+....++++++|+|+++|++|.+++++.++.+++.+++ .+++++++ ||.
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~~~~~~~~-~~~~~i~~agH~ 263 (282)
T TIGR03343 185 QGRWENIQRQPEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHGLKLLWNMPD-AQLHVFSRCGHW 263 (282)
T ss_pred HhHHHHhhcCHHHHHHHHHhccccccccchHHHHHhhCCCCEEEEEccCCCcCCchhHHHHHHhCCC-CEEEEeCCCCcC
Confidence 00000 0000000000111123345678999999999999999999999999998876 47777776 999
Q ss_pred CC--ChhhHHHHHHHHHH
Q 016885 265 SS--RPQFYYDSVSIFFY 280 (381)
Q Consensus 265 ~~--~~~~~~~~i~~fl~ 280 (381)
.. .++++.+.|.+||.
T Consensus 264 ~~~e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 264 AQWEHADAFNRLVIDFLR 281 (282)
T ss_pred CcccCHHHHHHHHHHHhh
Confidence 54 78899999999985
No 19
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.91 E-value=4.2e-23 Score=186.73 Aligned_cols=226 Identities=15% Similarity=0.173 Sum_probs=143.7
Q ss_pred CCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcch-hhHHH
Q 016885 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE-KDDLK 123 (381)
Q Consensus 45 ~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~-~~d~~ 123 (381)
.+|.++.+..+ +..|+|||+||++++...|..++..|++++ .|+++|+||||.|+.......... ++|+.
T Consensus 14 ~~g~~i~y~~~--------G~g~~vvllHG~~~~~~~w~~~~~~L~~~~-~via~D~~G~G~S~~~~~~~~~~~~a~dl~ 84 (295)
T PRK03592 14 VLGSRMAYIET--------GEGDPIVFLHGNPTSSYLWRNIIPHLAGLG-RCLAPDLIGMGASDKPDIDYTFADHARYLD 84 (295)
T ss_pred ECCEEEEEEEe--------CCCCEEEEECCCCCCHHHHHHHHHHHhhCC-EEEEEcCCCCCCCCCCCCCCCHHHHHHHHH
Confidence 47888876653 345899999999999999999999998875 999999999999986543222221 34444
Q ss_pred HHHHHHHhcCCCCcEEEEEEchhHHHHHHhhccCCC-ccEEEeccCccCHH------HHHHHHHHHhhhhC---------
Q 016885 124 VVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLF------DLMLELVDVYKIRL--------- 187 (381)
Q Consensus 124 ~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~~~------~~~~~~~~~~~~~~--------- 187 (381)
++++.+ +.++++++||||||.+++.++.++|+ |+++|++++..... ..............
T Consensus 85 ~ll~~l----~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (295)
T PRK03592 85 AWFDAL----GLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPAVRELFQALRSPGEGEEMVLEE 160 (295)
T ss_pred HHHHHh----CCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchhHHHHHHHHhCcccccccccch
Confidence 444443 66899999999999999999999998 99999998743211 00111111110000
Q ss_pred --------Cc-----ccHHHHHHHHHHHhhhh---------hhccc----cc-----cchhhcCCCCCCcEEEEeeCCCC
Q 016885 188 --------PK-----FTVKMAVQYMRRVIQKK---------AKFDI----MD-----LNCLKLAPKTFIPALFGHASEDK 236 (381)
Q Consensus 188 --------~~-----~~~~~~~~~~~~~~~~~---------~~~~~----~~-----~~~~~~~~~i~~Pvlii~G~~D~ 236 (381)
+. +.......+........ ..... .. ......+.++++|+|+|+|++|.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~ 240 (295)
T PRK03592 161 NVFIERVLPGSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDVPKLLINAEPGA 240 (295)
T ss_pred hhHHhhcccCcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCCCeEEEeccCCc
Confidence 00 00000000000000000 00000 00 01123456789999999999999
Q ss_pred ccChHHHHHHHHHcCCCceEEEeCC-CCCCC--ChhhHHHHHHHHHHhhc
Q 016885 237 FIRARHSDLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFYNVL 283 (381)
Q Consensus 237 ~v~~~~~~~l~~~~~~~~~~~~~~g-gH~~~--~~~~~~~~i~~fl~~~l 283 (381)
++++....++.....++.+++++++ ||... .|+++.+.+.+|+.+..
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~~~~ 290 (295)
T PRK03592 241 ILTTGAIRDWCRSWPNQLEITVFGAGLHFAQEDSPEEIGAAIAAWLRRLR 290 (295)
T ss_pred ccCcHHHHHHHHHhhhhcceeeccCcchhhhhcCHHHHHHHHHHHHHHhc
Confidence 9965555555544433456777765 99954 89999999999998654
No 20
>PRK10985 putative hydrolase; Provisional
Probab=99.91 E-value=2.4e-22 Score=183.76 Aligned_cols=263 Identities=14% Similarity=0.125 Sum_probs=159.9
Q ss_pred CCCCcccccccccc---------ccCcceeeEEEEEEcCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhc--HHH
Q 016885 16 EYNPDQYLWERDFM---------LAGRSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD--ANE 84 (381)
Q Consensus 16 ~~~~~~~~~~~~~~---------~~~~~~~~~~v~~~~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~--~~~ 84 (381)
.|.|+.++.+..++ ....++.++. +...||..+... |.+.. ......|+||++||++++... +..
T Consensus 3 ~~~p~~~~~~~h~qt~~~~~~~~~~~~~~~~~~--~~~~dg~~~~l~-w~~~~-~~~~~~p~vll~HG~~g~~~~~~~~~ 78 (324)
T PRK10985 3 EFTPMRGASNPHLQTLLPRLIRRKVLFTPYWQR--LELPDGDFVDLA-WSEDP-AQARHKPRLVLFHGLEGSFNSPYAHG 78 (324)
T ss_pred CCCCCcCCCCCcHHHhhHHHhcCCCCCCcceeE--EECCCCCEEEEe-cCCCC-ccCCCCCEEEEeCCCCCCCcCHHHHH
Confidence 46666666555554 1223444444 566788777654 33221 123457999999999887544 456
Q ss_pred HHHHhccCCcEEEEeCCCCCCCCCCCCc-CCCcchhhHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhhccCC-C--c
Q 016885 85 AAVILLPSNITLFTLDFSGSGLSDGDYV-SLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDP-S--I 160 (381)
Q Consensus 85 ~~~~l~~~G~~vi~~D~~G~G~S~~~~~-~~~~~~~~d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~p-~--v 160 (381)
++..|.++||+|+++|+||||.+..... .......+|+..+++++++..+..+++++||||||.+++.++++++ + +
T Consensus 79 ~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~ 158 (324)
T PRK10985 79 LLEAAQKRGWLGVVMHFRGCSGEPNRLHRIYHSGETEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPL 158 (324)
T ss_pred HHHHHHHCCCEEEEEeCCCCCCCccCCcceECCCchHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCc
Confidence 8889999999999999999997754321 1112236899999999998777789999999999998888777654 2 7
Q ss_pred cEEEeccCccCHHHHHHHHHHHh----hh---------------hCCcc---cHHHH------HHHHHHHhhhhhhcc--
Q 016885 161 AGMVLDSAFSDLFDLMLELVDVY----KI---------------RLPKF---TVKMA------VQYMRRVIQKKAKFD-- 210 (381)
Q Consensus 161 ~~vi~~~~~~~~~~~~~~~~~~~----~~---------------~~~~~---~~~~~------~~~~~~~~~~~~~~~-- 210 (381)
.++|++++..++........... .. ..+.. ..... ..+-.........+.
T Consensus 159 ~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~ 238 (324)
T PRK10985 159 DAAVIVSAPLMLEACSYRMEQGFSRVYQRYLLNLLKANAARKLAAYPGTLPINLAQLKSVRRLREFDDLITARIHGFADA 238 (324)
T ss_pred cEEEEEcCCCCHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhccccccCCHHHHhcCCcHHHHhhhheeccCCCCCH
Confidence 88888888776543211111100 00 00000 00000 000000000000000
Q ss_pred ---ccccchhhcCCCCCCcEEEEeeCCCCccChHHHHHHHHHcCCCceEEEeCC-CCCCC------Chh-hHHHHHHHHH
Q 016885 211 ---IMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS------RPQ-FYYDSVSIFF 279 (381)
Q Consensus 211 ---~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~g-gH~~~------~~~-~~~~~i~~fl 279 (381)
....+....+.++++|+++|+|++|++++.+....+.+..+ ...++++++ ||+.. .+. -.-+.+.+||
T Consensus 239 ~~~y~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~ 317 (324)
T PRK10985 239 IDYYRQCSALPLLNQIRKPTLIIHAKDDPFMTHEVIPKPESLPP-NVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWL 317 (324)
T ss_pred HHHHHHCChHHHHhCCCCCEEEEecCCCCCCChhhChHHHHhCC-CeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHH
Confidence 00123345678899999999999999999887776655544 446666665 99833 122 3334567788
Q ss_pred Hhhc
Q 016885 280 YNVL 283 (381)
Q Consensus 280 ~~~l 283 (381)
+..+
T Consensus 318 ~~~~ 321 (324)
T PRK10985 318 TTYL 321 (324)
T ss_pred HHhh
Confidence 6654
No 21
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.91 E-value=1.8e-22 Score=182.56 Aligned_cols=228 Identities=15% Similarity=0.177 Sum_probs=142.8
Q ss_pred CCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcC----CCcchhhH
Q 016885 46 RGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVS----LGWHEKDD 121 (381)
Q Consensus 46 dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~----~~~~~~~d 121 (381)
+|..+.+... +.+.|+|||+||++++...|..++..|+++ |+|+++|+||||.|+..... ......++
T Consensus 16 ~~~~i~y~~~-------G~~~~~vlllHG~~~~~~~w~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~ 87 (294)
T PLN02824 16 KGYNIRYQRA-------GTSGPALVLVHGFGGNADHWRKNTPVLAKS-HRVYAIDLLGYGYSDKPNPRSAPPNSFYTFET 87 (294)
T ss_pred cCeEEEEEEc-------CCCCCeEEEECCCCCChhHHHHHHHHHHhC-CeEEEEcCCCCCCCCCCccccccccccCCHHH
Confidence 5777765432 123489999999999999999999999876 79999999999999753211 00112333
Q ss_pred HHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhhccCCC-ccEEEeccCccCH---------HH-HHHHHHHHhhh-----
Q 016885 122 LKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDL---------FD-LMLELVDVYKI----- 185 (381)
Q Consensus 122 ~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~~---------~~-~~~~~~~~~~~----- 185 (381)
+.+.+..+.+..+.++++++||||||.+++.+|.++|+ |+++|++++.... .. ....+......
T Consensus 88 ~a~~l~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (294)
T PLN02824 88 WGEQLNDFCSDVVGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLRETAVGK 167 (294)
T ss_pred HHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHHHHHhchhHHH
Confidence 33333333333356899999999999999999999998 9999998874311 00 00000000000
Q ss_pred h-CCc-ccHHHHHHH---------------HHHHhhh---------hhhc-ccc-ccchhhcCCCCCCcEEEEeeCCCCc
Q 016885 186 R-LPK-FTVKMAVQY---------------MRRVIQK---------KAKF-DIM-DLNCLKLAPKTFIPALFGHASEDKF 237 (381)
Q Consensus 186 ~-~~~-~~~~~~~~~---------------~~~~~~~---------~~~~-~~~-~~~~~~~~~~i~~Pvlii~G~~D~~ 237 (381)
. ... ......... ....... ...+ ... .......+.++++|+|+|+|++|.+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~ 247 (294)
T PLN02824 168 AFFKSVATPETVKNILCQCYHDDSAVTDELVEAILRPGLEPGAVDVFLDFISYSGGPLPEELLPAVKCPVLIAWGEKDPW 247 (294)
T ss_pred HHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhccCCchHHHHHHHHhccccccchHHHHhhcCCCeEEEEecCCCC
Confidence 0 000 000000000 0000000 0000 000 0012244678899999999999999
Q ss_pred cChHHHHHHHHHcCCCceEEEeCC-CCCCC--ChhhHHHHHHHHHHhh
Q 016885 238 IRARHSDLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFYNV 282 (381)
Q Consensus 238 v~~~~~~~l~~~~~~~~~~~~~~g-gH~~~--~~~~~~~~i~~fl~~~ 282 (381)
++.+.++.+.+..+. .+++++++ ||... .++++.+.+.+|++++
T Consensus 248 ~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (294)
T PLN02824 248 EPVELGRAYANFDAV-EDFIVLPGVGHCPQDEAPELVNPLIESFVARH 294 (294)
T ss_pred CChHHHHHHHhcCCc-cceEEeCCCCCChhhhCHHHHHHHHHHHHhcC
Confidence 999988887665544 46777875 99854 8899999999999753
No 22
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.91 E-value=1.2e-22 Score=179.44 Aligned_cols=211 Identities=16% Similarity=0.202 Sum_probs=136.3
Q ss_pred CCCcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcC-CCcch-hhHHHHHHHHHHhcCCCCcEEEE
Q 016885 64 TPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVS-LGWHE-KDDLKVVVSYLRGNKQTSRIGLW 141 (381)
Q Consensus 64 ~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~-~~~~~-~~d~~~~i~~l~~~~~~~~i~l~ 141 (381)
.+.|+||++||++++...|...+..|.+ ||+|+++|+||||.|...... ....+ ++++.++++. .+.++++++
T Consensus 11 ~~~~~iv~lhG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~----~~~~~~~l~ 85 (257)
T TIGR03611 11 ADAPVVVLSSGLGGSGSYWAPQLDVLTQ-RFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDA----LNIERFHFV 85 (257)
T ss_pred CCCCEEEEEcCCCcchhHHHHHHHHHHh-ccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHH----hCCCcEEEE
Confidence 4578999999999999989888887765 799999999999999754321 12111 3344444433 356889999
Q ss_pred EEchhHHHHHHhhccCCC-ccEEEeccCccCHHHHHHH----HHHHhhh-hCCcc---------cHHHHHHHHH----HH
Q 016885 142 GRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLE----LVDVYKI-RLPKF---------TVKMAVQYMR----RV 202 (381)
Q Consensus 142 G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~~~~~~~~----~~~~~~~-~~~~~---------~~~~~~~~~~----~~ 202 (381)
||||||.+++.++.++|+ ++++|++++.......... ....... ....+ ...+...... ..
T Consensus 86 G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (257)
T TIGR03611 86 GHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTRRCFDVRIALLQHAGPEAYVHAQALFLYPADWISENAARLAADE 165 (257)
T ss_pred EechhHHHHHHHHHHChHHhHHheeecCCCCCChhHHHHHHHHHHHHhccCcchhhhhhhhhhccccHhhccchhhhhhh
Confidence 999999999999999987 9999998876543211110 0000000 00000 0000000000 00
Q ss_pred hhhhhhc-----------cccccchhhcCCCCCCcEEEEeeCCCCccChHHHHHHHHHcCCCceEEEeCC-CCCCC--Ch
Q 016885 203 IQKKAKF-----------DIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS--RP 268 (381)
Q Consensus 203 ~~~~~~~-----------~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~g-gH~~~--~~ 268 (381)
......+ .....+....+.++++|+++++|++|.++|++.+..+++.+++. +++.+++ ||... .+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~~ 244 (257)
T TIGR03611 166 AHALAHFPGKANVLRRINALEAFDVSARLDRIQHPVLLIANRDDMLVPYTQSLRLAAALPNA-QLKLLPYGGHASNVTDP 244 (257)
T ss_pred hhcccccCccHHHHHHHHHHHcCCcHHHhcccCccEEEEecCcCcccCHHHHHHHHHhcCCc-eEEEECCCCCCccccCH
Confidence 0000000 00111233456778999999999999999999999999988765 5666764 99844 78
Q ss_pred hhHHHHHHHHHH
Q 016885 269 QFYYDSVSIFFY 280 (381)
Q Consensus 269 ~~~~~~i~~fl~ 280 (381)
+++.+.+.+||+
T Consensus 245 ~~~~~~i~~fl~ 256 (257)
T TIGR03611 245 ETFNRALLDFLK 256 (257)
T ss_pred HHHHHHHHHHhc
Confidence 889999999985
No 23
>PRK06489 hypothetical protein; Provisional
Probab=99.90 E-value=5.2e-22 Score=184.26 Aligned_cols=243 Identities=14% Similarity=0.169 Sum_probs=148.4
Q ss_pred ceeeEEEEEEc---CCCeEEEEEEeecCCCCCCCC-------CcEEEEeCCCCCChhcHH--HHHHHh-------ccCCc
Q 016885 34 SYKRQDLEIRN---ARGHVLQCSHYMPSPFPEDTP-------LPCVVYCHGNSGCRADAN--EAAVIL-------LPSNI 94 (381)
Q Consensus 34 ~~~~~~v~~~~---~dg~~l~~~~~~P~~~~~~~~-------~p~vv~~HG~~~~~~~~~--~~~~~l-------~~~G~ 94 (381)
.|.-++.++.. .+|.++.+..+ +.+. .|+|||+||++++...|. .+...| ...+|
T Consensus 33 ~~~~~~~~~~~~~~~~g~~i~y~~~------G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~ 106 (360)
T PRK06489 33 DWVARDFTFHSGETLPELRLHYTTL------GTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKY 106 (360)
T ss_pred ceeccceeccCCCCcCCceEEEEec------CCCCcccccCCCCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCC
Confidence 34555555554 45666665543 1222 689999999999887765 444443 24579
Q ss_pred EEEEeCCCCCCCCCCCCcCC----CcchhhHHH-HHHHHHHhcCCCCcEE-EEEEchhHHHHHHhhccCCC-ccEEEecc
Q 016885 95 TLFTLDFSGSGLSDGDYVSL----GWHEKDDLK-VVVSYLRGNKQTSRIG-LWGRSMGAVTSLLYGAEDPS-IAGMVLDS 167 (381)
Q Consensus 95 ~vi~~D~~G~G~S~~~~~~~----~~~~~~d~~-~~i~~l~~~~~~~~i~-l~G~S~GG~~a~~~a~~~p~-v~~vi~~~ 167 (381)
+|+++|+||||.|+...... .....+++. .++..+.+..+.+++. ++||||||++++.+|.++|+ |+++|+++
T Consensus 107 ~Via~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~ 186 (360)
T PRK06489 107 FIILPDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMA 186 (360)
T ss_pred EEEEeCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeec
Confidence 99999999999997532211 011234443 3444455555778875 89999999999999999998 99999987
Q ss_pred CccCH---HHH-HHHH-HHHhhh-------hCCccc--HHH-------------------------HHHHHHHHhhhhh-
Q 016885 168 AFSDL---FDL-MLEL-VDVYKI-------RLPKFT--VKM-------------------------AVQYMRRVIQKKA- 207 (381)
Q Consensus 168 ~~~~~---~~~-~~~~-~~~~~~-------~~~~~~--~~~-------------------------~~~~~~~~~~~~~- 207 (381)
+.... ... .... ...... ...... ... ...++........
T Consensus 187 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (360)
T PRK06489 187 SQPTEMSGRNWMWRRMLIESIRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPVT 266 (360)
T ss_pred cCcccccHHHHHHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhhh
Confidence 64311 110 1000 000000 000000 000 0000000000000
Q ss_pred ----h----cc-ccccchhhcCCCCCCcEEEEeeCCCCccChHHH--HHHHHHcCCCceEEEeCC-----CCCCC-Chhh
Q 016885 208 ----K----FD-IMDLNCLKLAPKTFIPALFGHASEDKFIRARHS--DLIFNAYAGDKNIIKFDG-----DHNSS-RPQF 270 (381)
Q Consensus 208 ----~----~~-~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~--~~l~~~~~~~~~~~~~~g-----gH~~~-~~~~ 270 (381)
. +. ....+....+.++++|+|+|+|++|.++|++.+ +.+.+.+++. +++++++ ||... .|++
T Consensus 267 ~~~~~~~~~~~~~~~~d~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~a-~l~~i~~a~~~~GH~~~e~P~~ 345 (360)
T PRK06489 267 ADANDFLYQWDSSRDYNPSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRVKHG-RLVLIPASPETRGHGTTGSAKF 345 (360)
T ss_pred cCHHHHHHHHHHhhccChHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhCcCC-eEEEECCCCCCCCcccccCHHH
Confidence 0 00 011233456778999999999999999998865 7788888775 6777775 89854 7889
Q ss_pred HHHHHHHHHHhhc
Q 016885 271 YYDSVSIFFYNVL 283 (381)
Q Consensus 271 ~~~~i~~fl~~~l 283 (381)
+.+.|.+||+++-
T Consensus 346 ~~~~i~~FL~~~~ 358 (360)
T PRK06489 346 WKAYLAEFLAQVP 358 (360)
T ss_pred HHHHHHHHHHhcc
Confidence 9999999997653
No 24
>PLN02578 hydrolase
Probab=99.90 E-value=7.4e-22 Score=182.72 Aligned_cols=223 Identities=16% Similarity=0.175 Sum_probs=142.9
Q ss_pred cCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcch-hhHH
Q 016885 44 NARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE-KDDL 122 (381)
Q Consensus 44 ~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~-~~d~ 122 (381)
+.+|.++.+... ++.|.||++||++++...|...+..|++ +|.|+++|+||||.|++......... .+++
T Consensus 72 ~~~~~~i~Y~~~--------g~g~~vvliHG~~~~~~~w~~~~~~l~~-~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~l 142 (354)
T PLN02578 72 TWRGHKIHYVVQ--------GEGLPIVLIHGFGASAFHWRYNIPELAK-KYKVYALDLLGFGWSDKALIEYDAMVWRDQV 142 (354)
T ss_pred EECCEEEEEEEc--------CCCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCcccccCHHHHHHHH
Confidence 345666665431 2447799999999999989888888876 69999999999999987644332211 2344
Q ss_pred HHHHHHHHhcCCCCcEEEEEEchhHHHHHHhhccCCC-ccEEEeccCccCHHH--------------HHH-----H---H
Q 016885 123 KVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFD--------------LML-----E---L 179 (381)
Q Consensus 123 ~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~~~~--------------~~~-----~---~ 179 (381)
.+.++.+ ..++++++||||||.+++.+|.++|+ ++++|++++...... ... . .
T Consensus 143 ~~~i~~~----~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (354)
T PLN02578 143 ADFVKEV----VKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEW 218 (354)
T ss_pred HHHHHHh----ccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHHHhHHHHHH
Confidence 4444333 45789999999999999999999998 999999875421100 000 0 0
Q ss_pred HHHhhhh---CCcccHHHHHHHH--------------HHHh--------------hhhhhc--cccccchhhcCCCCCCc
Q 016885 180 VDVYKIR---LPKFTVKMAVQYM--------------RRVI--------------QKKAKF--DIMDLNCLKLAPKTFIP 226 (381)
Q Consensus 180 ~~~~~~~---~~~~~~~~~~~~~--------------~~~~--------------~~~~~~--~~~~~~~~~~~~~i~~P 226 (381)
....... ............. .... .....+ ........+.+.++++|
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 298 (354)
T PLN02578 219 FQRVVLGFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESITEPAADPNAGEVYYRLMSRFLFNQSRYTLDSLLSKLSCP 298 (354)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHHHhcccCCchHHHHHHHHHHHhcCCCCCCHHHHhhcCCCC
Confidence 0000000 0000000000000 0000 000000 00112233556789999
Q ss_pred EEEEeeCCCCccChHHHHHHHHHcCCCceEEEeCCCCCCC--ChhhHHHHHHHHHH
Q 016885 227 ALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDGDHNSS--RPQFYYDSVSIFFY 280 (381)
Q Consensus 227 vlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~ggH~~~--~~~~~~~~i~~fl~ 280 (381)
+++++|++|.+++.+.++.+.+.+++. +++++++||+.. .|+++.+.|.+|+.
T Consensus 299 vLiI~G~~D~~v~~~~~~~l~~~~p~a-~l~~i~~GH~~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 299 LLLLWGDLDPWVGPAKAEKIKAFYPDT-TLVNLQAGHCPHDEVPEQVNKALLEWLS 353 (354)
T ss_pred EEEEEeCCCCCCCHHHHHHHHHhCCCC-EEEEeCCCCCccccCHHHHHHHHHHHHh
Confidence 999999999999999999999988765 666678899844 88999999999985
No 25
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.90 E-value=1.6e-22 Score=185.00 Aligned_cols=234 Identities=17% Similarity=0.186 Sum_probs=151.6
Q ss_pred EEcCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhc-H-------------------------HHHHHHhccCCcE
Q 016885 42 IRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD-A-------------------------NEAAVILLPSNIT 95 (381)
Q Consensus 42 ~~~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~-~-------------------------~~~~~~l~~~G~~ 95 (381)
|.+.||..|.++.|.|. .++.+|+++||++++... + ..+++.|.++||.
T Consensus 2 ~~~~~g~~l~~~~~~~~-----~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~ 76 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVK-----NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYS 76 (332)
T ss_pred ccCCCCCeEEEeeeecc-----CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCc
Confidence 56789999999999874 467899999999988751 1 4678999999999
Q ss_pred EEEeCCCCCCCCCCCCcCC----Ccch-hhHHHHHHHHHHh-------------------cCC-CCcEEEEEEchhHHHH
Q 016885 96 LFTLDFSGSGLSDGDYVSL----GWHE-KDDLKVVVSYLRG-------------------NKQ-TSRIGLWGRSMGAVTS 150 (381)
Q Consensus 96 vi~~D~~G~G~S~~~~~~~----~~~~-~~d~~~~i~~l~~-------------------~~~-~~~i~l~G~S~GG~~a 150 (381)
|+++|+||||.|.+..... ++.. ++|+.+.++.+.+ ... ..+++|+||||||.++
T Consensus 77 V~~~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~ 156 (332)
T TIGR01607 77 VYGLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIA 156 (332)
T ss_pred EEEecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHH
Confidence 9999999999998642211 3333 5778888877754 122 4689999999999999
Q ss_pred HHhhccCC---------CccEEEeccCccCH-----------HHHHHHHHHHhhhhCCcccHH------HHHHHHHHHhh
Q 016885 151 LLYGAEDP---------SIAGMVLDSAFSDL-----------FDLMLELVDVYKIRLPKFTVK------MAVQYMRRVIQ 204 (381)
Q Consensus 151 ~~~a~~~p---------~v~~vi~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~ 204 (381)
+.++...+ .++|+|+.+|...+ ...............|.+... ...........
T Consensus 157 ~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 236 (332)
T TIGR01607 157 LRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFRISKKIRYEKSPYVNDIIKF 236 (332)
T ss_pred HHHHHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcccccCccccccChhhhhHHhc
Confidence 99886432 38899988876422 111111111111112221110 00000000000
Q ss_pred hhhhcc----------cccc--chhhcCCCC--CCcEEEEeeCCCCccChHHHHHHHHHcC-CCceEEEeCC-CCCCC--
Q 016885 205 KKAKFD----------IMDL--NCLKLAPKT--FIPALFGHASEDKFIRARHSDLIFNAYA-GDKNIIKFDG-DHNSS-- 266 (381)
Q Consensus 205 ~~~~~~----------~~~~--~~~~~~~~i--~~Pvlii~G~~D~~v~~~~~~~l~~~~~-~~~~~~~~~g-gH~~~-- 266 (381)
+...+. +... .....+.++ ++|+|+++|++|.+++++.++.+++++. ..++++++++ +|...
T Consensus 237 Dp~~~~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~~g~~H~i~~E 316 (332)
T TIGR01607 237 DKFRYDGGITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTLEDMDHVITIE 316 (332)
T ss_pred CccccCCcccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEEECCCCCCCccC
Confidence 000000 0000 011233344 6899999999999999999999988874 4578888988 88854
Q ss_pred -ChhhHHHHHHHHHH
Q 016885 267 -RPQFYYDSVSIFFY 280 (381)
Q Consensus 267 -~~~~~~~~i~~fl~ 280 (381)
..+++.+.+.+||+
T Consensus 317 ~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 317 PGNEEVLKKIIEWIS 331 (332)
T ss_pred CCHHHHHHHHHHHhh
Confidence 35788889999985
No 26
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.90 E-value=1.6e-22 Score=178.91 Aligned_cols=212 Identities=17% Similarity=0.223 Sum_probs=137.4
Q ss_pred CCCCcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcch-hhHHHHHHHHHHhcCCCCcEEEE
Q 016885 63 DTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE-KDDLKVVVSYLRGNKQTSRIGLW 141 (381)
Q Consensus 63 ~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~-~~d~~~~i~~l~~~~~~~~i~l~ 141 (381)
...+|+||++||++++...|..++..|++ +|.|+++|+||||.|..... ..+.+ ++|+.++++++ +.++++++
T Consensus 13 ~~~~~~iv~lhG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~s~~~~~-~~~~~~~~d~~~~l~~l----~~~~~~lv 86 (255)
T PRK10673 13 PHNNSPIVLVHGLFGSLDNLGVLARDLVN-DHDIIQVDMRNHGLSPRDPV-MNYPAMAQDLLDTLDAL----QIEKATFI 86 (255)
T ss_pred CCCCCCEEEECCCCCchhHHHHHHHHHhh-CCeEEEECCCCCCCCCCCCC-CCHHHHHHHHHHHHHHc----CCCceEEE
Confidence 45679999999999999999999998876 69999999999999975432 22222 45555555554 56789999
Q ss_pred EEchhHHHHHHhhccCCC-ccEEEeccCccCHH--HHHHHHHHHh----hhhCCccc--H---------HHHHHHHHHHh
Q 016885 142 GRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLF--DLMLELVDVY----KIRLPKFT--V---------KMAVQYMRRVI 203 (381)
Q Consensus 142 G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~~~--~~~~~~~~~~----~~~~~~~~--~---------~~~~~~~~~~~ 203 (381)
||||||.+++.+|.++|+ |+++|++++..... .......... ........ . .....+.....
T Consensus 87 GhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (255)
T PRK10673 87 GHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGATTRQQAAAIMRQHLNEEGVIQFLLKSF 166 (255)
T ss_pred EECHHHHHHHHHHHhCHhhcceEEEEecCCCCccchhhHHHHHHHHHhhhcccccHHHHHHHHHHhcCCHHHHHHHHhcC
Confidence 999999999999999997 99999875422110 0000000000 00000000 0 00000000000
Q ss_pred hhhh-hc-------cccccchhhcCCCCCCcEEEEeeCCCCccChHHHHHHHHHcCCCceEEEeCC-CCCCC--ChhhHH
Q 016885 204 QKKA-KF-------DIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS--RPQFYY 272 (381)
Q Consensus 204 ~~~~-~~-------~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~g-gH~~~--~~~~~~ 272 (381)
.... .+ ..........++.+++|+|+++|++|..++.+.++.+.+.+++. +++++++ ||... .++++.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~p~~~~ 245 (255)
T PRK10673 167 VDGEWRFNVPVLWDQYPHIVGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQFPQA-RAHVIAGAGHWVHAEKPDAVL 245 (255)
T ss_pred CcceeEeeHHHHHHhHHHHhCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhCCCc-EEEEeCCCCCeeeccCHHHHH
Confidence 0000 00 00000111345677899999999999999999999998888764 6666776 99844 788899
Q ss_pred HHHHHHHHh
Q 016885 273 DSVSIFFYN 281 (381)
Q Consensus 273 ~~i~~fl~~ 281 (381)
+.+.+||.+
T Consensus 246 ~~l~~fl~~ 254 (255)
T PRK10673 246 RAIRRYLND 254 (255)
T ss_pred HHHHHHHhc
Confidence 999999964
No 27
>PLN02965 Probable pheophorbidase
Probab=99.90 E-value=4.5e-22 Score=176.07 Aligned_cols=209 Identities=14% Similarity=0.177 Sum_probs=135.1
Q ss_pred EEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCc-CCCcch-hhHHHHHHHHHHhcCCC-CcEEEEEEc
Q 016885 68 CVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYV-SLGWHE-KDDLKVVVSYLRGNKQT-SRIGLWGRS 144 (381)
Q Consensus 68 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~-~~~~~~-~~d~~~~i~~l~~~~~~-~~i~l~G~S 144 (381)
+|||+||++.+...|..++..|.+.||.|+++|+||||.|+.... ...... ++|+.++++.+ +. ++++++|||
T Consensus 5 ~vvllHG~~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l----~~~~~~~lvGhS 80 (255)
T PLN02965 5 HFVFVHGASHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDL----PPDHKVILVGHS 80 (255)
T ss_pred EEEEECCCCCCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhc----CCCCCEEEEecC
Confidence 599999999999999999999988899999999999999975432 122111 33444444433 44 599999999
Q ss_pred hhHHHHHHhhccCCC-ccEEEeccCcc---CH--HHHHHHHHH----Hhhh------hCCc----ccHHHHHHHH-HHH-
Q 016885 145 MGAVTSLLYGAEDPS-IAGMVLDSAFS---DL--FDLMLELVD----VYKI------RLPK----FTVKMAVQYM-RRV- 202 (381)
Q Consensus 145 ~GG~~a~~~a~~~p~-v~~vi~~~~~~---~~--~~~~~~~~~----~~~~------~~~~----~~~~~~~~~~-~~~- 202 (381)
|||.+++.++.++|+ |+++|++++.. .. ......... .+.. ..+. .......... ...
T Consensus 81 mGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (255)
T PLN02965 81 IGGGSVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFGEGPDKPPTGIMMKPEFVRHYYYNQSP 160 (255)
T ss_pred cchHHHHHHHHhCchheeEEEEEccccCCCCCCccHHHHhhhhccccceeeeeccCCCCCcchhhcCHHHHHHHHhcCCC
Confidence 999999999999988 99999988652 11 111110000 0000 0000 0000100000 000
Q ss_pred ----hhhhhh-----cc-cccc-chhhcCCCCCCcEEEEeeCCCCccChHHHHHHHHHcCCCceEEEeCC-CCCCC--Ch
Q 016885 203 ----IQKKAK-----FD-IMDL-NCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS--RP 268 (381)
Q Consensus 203 ----~~~~~~-----~~-~~~~-~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~g-gH~~~--~~ 268 (381)
...... .. .... .....+.++++|+++++|++|..+|++.++.+.+.+++. +++++++ ||... .|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~~a-~~~~i~~~GH~~~~e~p 239 (255)
T PLN02965 161 LEDYTLSSKLLRPAPVRAFQDLDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWPPA-QTYVLEDSDHSAFFSVP 239 (255)
T ss_pred HHHHHHHHHhcCCCCCcchhhhhhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCCcc-eEEEecCCCCchhhcCH
Confidence 000000 00 0000 011234468999999999999999999999999999875 5666765 99844 89
Q ss_pred hhHHHHHHHHHHh
Q 016885 269 QFYYDSVSIFFYN 281 (381)
Q Consensus 269 ~~~~~~i~~fl~~ 281 (381)
+++.+.+.+|++.
T Consensus 240 ~~v~~~l~~~~~~ 252 (255)
T PLN02965 240 TTLFQYLLQAVSS 252 (255)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999865
No 28
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.90 E-value=8.9e-22 Score=176.29 Aligned_cols=226 Identities=16% Similarity=0.123 Sum_probs=144.1
Q ss_pred cCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCc-CCCcchhhHH
Q 016885 44 NARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYV-SLGWHEKDDL 122 (381)
Q Consensus 44 ~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~-~~~~~~~~d~ 122 (381)
..+|.++.+... +....|+||++||++++...|..+...|++ +|+|+++|+||||.|..... ... .+++
T Consensus 12 ~~~~~~~~~~~~------g~~~~~~vv~~hG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~---~~~~ 81 (278)
T TIGR03056 12 TVGPFHWHVQDM------GPTAGPLLLLLHGTGASTHSWRDLMPPLAR-SFRVVAPDLPGHGFTRAPFRFRFT---LPSM 81 (278)
T ss_pred eECCEEEEEEec------CCCCCCeEEEEcCCCCCHHHHHHHHHHHhh-CcEEEeecCCCCCCCCCccccCCC---HHHH
Confidence 347777775543 223458999999999999999999988876 69999999999999975443 222 2343
Q ss_pred HHHHHHHHhcCCCCcEEEEEEchhHHHHHHhhccCCC-ccEEEeccCccCHHH--------HHHHHHH----------Hh
Q 016885 123 KVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFD--------LMLELVD----------VY 183 (381)
Q Consensus 123 ~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~~~~--------~~~~~~~----------~~ 183 (381)
.+.+..+.+..+.++++|+||||||.+++.+|.++|+ +++++++++...... ....... ..
T Consensus 82 ~~~l~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (278)
T TIGR03056 82 AEDLSALCAAEGLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYMARVLACNPFTPPMMSRG 161 (278)
T ss_pred HHHHHHHHHHcCCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccchhhHhhhhcccchHHHHhh
Confidence 3334344444466889999999999999999999998 899998876432110 0000000 00
Q ss_pred hhhCCccc----------HHHHHHHHHHHhhhhh-------hc-cccccchhhcCCCCCCcEEEEeeCCCCccChHHHHH
Q 016885 184 KIRLPKFT----------VKMAVQYMRRVIQKKA-------KF-DIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDL 245 (381)
Q Consensus 184 ~~~~~~~~----------~~~~~~~~~~~~~~~~-------~~-~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~ 245 (381)
........ ......+......... .. ..........++++++|+++++|++|.++|.+.++.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g~~D~~vp~~~~~~ 241 (278)
T TIGR03056 162 AADQQRVERLIRDTGSLLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAGEEDKAVPPDESKR 241 (278)
T ss_pred cccCcchhHHhhccccccccchhhHHHHhhcCchhhhHHHHHhhcccccchhhhcccCCCCEEEEEeCCCcccCHHHHHH
Confidence 00000000 0000000000000000 00 000001224567789999999999999999999999
Q ss_pred HHHHcCCCceEEEeCC-CCCCC--ChhhHHHHHHHHHH
Q 016885 246 IFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFY 280 (381)
Q Consensus 246 l~~~~~~~~~~~~~~g-gH~~~--~~~~~~~~i~~fl~ 280 (381)
+.+.+++. +++++++ ||... .++++.+.|.+|++
T Consensus 242 ~~~~~~~~-~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 242 AATRVPTA-TLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred HHHhccCC-eEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 88887654 6777887 99855 78899999999973
No 29
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.90 E-value=2.1e-21 Score=182.80 Aligned_cols=235 Identities=13% Similarity=0.101 Sum_probs=148.3
Q ss_pred EEEcCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhcHHH-HHHHhc---cCCcEEEEeCCCCCCCCCCCCcCCCc
Q 016885 41 EIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANE-AAVILL---PSNITLFTLDFSGSGLSDGDYVSLGW 116 (381)
Q Consensus 41 ~~~~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~-~~~~l~---~~G~~vi~~D~~G~G~S~~~~~~~~~ 116 (381)
.+.+.+|.+|++....|.+ +..+|+|||+||++++...|.. +...|. +.+|.|+++|+||||.|+..... .
T Consensus 179 ~~~~~~~~~l~~~~~gp~~---~~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~-~- 253 (481)
T PLN03087 179 SWLSSSNESLFVHVQQPKD---NKAKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADS-L- 253 (481)
T ss_pred eeEeeCCeEEEEEEecCCC---CCCCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCC-c-
Confidence 3455667889988887752 3446899999999999888874 334454 46899999999999999754211 1
Q ss_pred chhhHHHHHH-HHHHhcCCCCcEEEEEEchhHHHHHHhhccCCC-ccEEEeccCccCHHHH----HHHHHHHhh--hhCC
Q 016885 117 HEKDDLKVVV-SYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDL----MLELVDVYK--IRLP 188 (381)
Q Consensus 117 ~~~~d~~~~i-~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~~~~~----~~~~~~~~~--~~~~ 188 (381)
...++..+.+ ..+.+..+.++++++||||||.+++.+|.++|+ |+++|++++....... ......... ...+
T Consensus 254 ytl~~~a~~l~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (481)
T PLN03087 254 YTLREHLEMIERSVLERYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGVQATQYVMRKVAPRRVWP 333 (481)
T ss_pred CCHHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccchhHHHHHHHHhcccccCC
Confidence 1233433344 244455577899999999999999999999998 9999998865421110 000000000 0000
Q ss_pred ccc-----HHH-----------------HHHHHHHHhhhh-----h-----------hc------ccc-----ccchhhc
Q 016885 189 KFT-----VKM-----------------AVQYMRRVIQKK-----A-----------KF------DIM-----DLNCLKL 219 (381)
Q Consensus 189 ~~~-----~~~-----------------~~~~~~~~~~~~-----~-----------~~------~~~-----~~~~~~~ 219 (381)
... ..+ ....+....... . .+ ... +......
T Consensus 334 ~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~l~~l 413 (481)
T PLN03087 334 PIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLDGYLDHV 413 (481)
T ss_pred ccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhhhhhHHHHH
Confidence 000 000 000000000000 0 00 000 0000112
Q ss_pred CCCCCCcEEEEeeCCCCccChHHHHHHHHHcCCCceEEEeCC-CCCC---CChhhHHHHHHHHHHh
Q 016885 220 APKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNS---SRPQFYYDSVSIFFYN 281 (381)
Q Consensus 220 ~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~g-gH~~---~~~~~~~~~i~~fl~~ 281 (381)
..++++|+|+++|++|.++|++.++.+.+.+++. +++++++ ||.. ..++++++.+.+|...
T Consensus 414 ~~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP~a-~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~~ 478 (481)
T PLN03087 414 RDQLKCDVAIFHGGDDELIPVECSYAVKAKVPRA-RVKVIDDKDHITIVVGRQKEFARELEEIWRR 478 (481)
T ss_pred HHhCCCCEEEEEECCCCCCCHHHHHHHHHhCCCC-EEEEeCCCCCcchhhcCHHHHHHHHHHHhhc
Confidence 2368999999999999999999999999999774 7888876 9983 3689999999999853
No 30
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.89 E-value=3.3e-21 Score=178.67 Aligned_cols=210 Identities=18% Similarity=0.250 Sum_probs=130.7
Q ss_pred CCcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCc-CCCcch-hhHHHHHHHHHHhcCCCCcEEEEE
Q 016885 65 PLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYV-SLGWHE-KDDLKVVVSYLRGNKQTSRIGLWG 142 (381)
Q Consensus 65 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~-~~~~~~-~~d~~~~i~~l~~~~~~~~i~l~G 142 (381)
..|+|||+||++++...|..++..|.+ +|.|+++|+||||.|+.... ...... ++++.++++. .+.++++|+|
T Consensus 87 ~gp~lvllHG~~~~~~~w~~~~~~L~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~~~l~~----l~~~~~~lvG 161 (360)
T PLN02679 87 SGPPVLLVHGFGASIPHWRRNIGVLAK-NYTVYAIDLLGFGASDKPPGFSYTMETWAELILDFLEE----VVQKPTVLIG 161 (360)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCCCccccHHHHHHHHHHHHHH----hcCCCeEEEE
Confidence 348999999999999999999998876 79999999999999975432 122111 3333333333 3568999999
Q ss_pred EchhHHHHHHhhcc-CCC-ccEEEeccCccCHH------HHHHH-------HHHHhhhhCCccc---------HHHHHHH
Q 016885 143 RSMGAVTSLLYGAE-DPS-IAGMVLDSAFSDLF------DLMLE-------LVDVYKIRLPKFT---------VKMAVQY 198 (381)
Q Consensus 143 ~S~GG~~a~~~a~~-~p~-v~~vi~~~~~~~~~------~~~~~-------~~~~~~~~~~~~~---------~~~~~~~ 198 (381)
|||||.+++.++.. +|+ |+++|++++..... ..... ..... ...+... ......+
T Consensus 162 hS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 240 (360)
T PLN02679 162 NSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFL-LKQRGIASALFNRVKQRDNLKNI 240 (360)
T ss_pred ECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHH-hhchhhHHHHHHHhcCHHHHHHH
Confidence 99999999988874 676 99999988653210 00000 00000 0000000 0000000
Q ss_pred HHHH--------------h----hhh---hh----cc-ccccchhhcCCCCCCcEEEEeeCCCCccChHHH-----HHHH
Q 016885 199 MRRV--------------I----QKK---AK----FD-IMDLNCLKLAPKTFIPALFGHASEDKFIRARHS-----DLIF 247 (381)
Q Consensus 199 ~~~~--------------~----~~~---~~----~~-~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~-----~~l~ 247 (381)
+... . ... .. .. ....+....+.++++|+|+++|++|.++|++.. ..+.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLii~G~~D~~~p~~~~~~~~~~~l~ 320 (360)
T PLN02679 241 LLSVYGNKEAVDDELVEIIRGPADDEGALDAFVSIVTGPPGPNPIKLIPRISLPILVLWGDQDPFTPLDGPVGKYFSSLP 320 (360)
T ss_pred HHHhccCcccCCHHHHHHHHhhccCCChHHHHHHHHhcCCCCCHHHHhhhcCCCEEEEEeCCCCCcCchhhHHHHHHhhh
Confidence 0000 0 000 00 00 001122345678899999999999999988632 2344
Q ss_pred HHcCCCceEEEeCC-CCCCC--ChhhHHHHHHHHHHh
Q 016885 248 NAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFYN 281 (381)
Q Consensus 248 ~~~~~~~~~~~~~g-gH~~~--~~~~~~~~i~~fl~~ 281 (381)
+.+++ .+++++++ ||... .|+++.+.|.+||.+
T Consensus 321 ~~ip~-~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~~ 356 (360)
T PLN02679 321 SQLPN-VTLYVLEGVGHCPHDDRPDLVHEKLLPWLAQ 356 (360)
T ss_pred ccCCc-eEEEEcCCCCCCccccCHHHHHHHHHHHHHh
Confidence 44554 57888887 99844 789999999999975
No 31
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.89 E-value=2.1e-21 Score=174.69 Aligned_cols=238 Identities=23% Similarity=0.294 Sum_probs=154.9
Q ss_pred eeeEEEEEEcCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCC---
Q 016885 35 YKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDY--- 111 (381)
Q Consensus 35 ~~~~~v~~~~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~--- 111 (381)
+...+|+|.+.+|..|.++++.|+. ..++.|+||.+||+++....+.... .++.+||.|+.+|.||+|......
T Consensus 54 ~~vy~v~f~s~~g~~V~g~l~~P~~--~~~~~Pavv~~hGyg~~~~~~~~~~-~~a~~G~~vl~~d~rGqg~~~~d~~~~ 130 (320)
T PF05448_consen 54 VEVYDVSFESFDGSRVYGWLYRPKN--AKGKLPAVVQFHGYGGRSGDPFDLL-PWAAAGYAVLAMDVRGQGGRSPDYRGS 130 (320)
T ss_dssp EEEEEEEEEEGGGEEEEEEEEEES---SSSSEEEEEEE--TT--GGGHHHHH-HHHHTT-EEEEE--TTTSSSS-B-SSB
T ss_pred EEEEEEEEEccCCCEEEEEEEecCC--CCCCcCEEEEecCCCCCCCCccccc-ccccCCeEEEEecCCCCCCCCCCcccc
Confidence 3445899999999999999999973 3578999999999999877766554 467889999999999998322110
Q ss_pred --------cCCCcc----------hhhHHHHHHHHHHhcCCC--CcEEEEEEchhHHHHHHhhccCCCccEEEeccCccC
Q 016885 112 --------VSLGWH----------EKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSD 171 (381)
Q Consensus 112 --------~~~~~~----------~~~d~~~~i~~l~~~~~~--~~i~l~G~S~GG~~a~~~a~~~p~v~~vi~~~~~~~ 171 (381)
...+.. ...|...+++++.+++.+ ++|++.|.|+||.+++.+|+.+++|+++++..|+..
T Consensus 131 ~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~rv~~~~~~vP~l~ 210 (320)
T PF05448_consen 131 SGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDPRVKAAAADVPFLC 210 (320)
T ss_dssp SSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSST-SEEEEESESSS
T ss_pred CCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCccccEEEecCCCcc
Confidence 000111 157889999999999876 899999999999999999999999999998888654
Q ss_pred HHHHHHHHHHHhhhhCCcccHHHHHHHHHHH---h-h-hhhhccccccchhhcCCCCCCcEEEEeeCCCCccChHHHHHH
Q 016885 172 LFDLMLELVDVYKIRLPKFTVKMAVQYMRRV---I-Q-KKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLI 246 (381)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~-~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l 246 (381)
-......... ...+......+++.. . . ....-.+.-++.....++|++|+++..|-.|+++|++.....
T Consensus 211 d~~~~~~~~~------~~~~y~~~~~~~~~~d~~~~~~~~v~~~L~Y~D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~ 284 (320)
T PF05448_consen 211 DFRRALELRA------DEGPYPEIRRYFRWRDPHHEREPEVFETLSYFDAVNFARRIKCPVLFSVGLQDPVCPPSTQFAA 284 (320)
T ss_dssp SHHHHHHHT--------STTTHHHHHHHHHHSCTHCHHHHHHHHHHTT-HHHHGGG--SEEEEEEETT-SSS-HHHHHHH
T ss_pred chhhhhhcCC------ccccHHHHHHHHhccCCCcccHHHHHHHHhhhhHHHHHHHcCCCEEEEEecCCCCCCchhHHHH
Confidence 3222211111 011112222222200 0 0 000001222345577888999999999999999999999999
Q ss_pred HHHcCCCceEEEeCC-CCCCCChhhHHHHHHHHHHhh
Q 016885 247 FNAYAGDKNIIKFDG-DHNSSRPQFYYDSVSIFFYNV 282 (381)
Q Consensus 247 ~~~~~~~~~~~~~~g-gH~~~~~~~~~~~i~~fl~~~ 282 (381)
+++++..|++.+++. ||... ++...+...+||.++
T Consensus 285 yN~i~~~K~l~vyp~~~He~~-~~~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 285 YNAIPGPKELVVYPEYGHEYG-PEFQEDKQLNFLKEH 320 (320)
T ss_dssp HCC--SSEEEEEETT--SSTT-HHHHHHHHHHHHHH-
T ss_pred HhccCCCeeEEeccCcCCCch-hhHHHHHHHHHHhcC
Confidence 999998899999998 66543 444478888999764
No 32
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.89 E-value=1.2e-21 Score=174.64 Aligned_cols=237 Identities=17% Similarity=0.196 Sum_probs=148.5
Q ss_pred EEEEEEcCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCC----ChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcC
Q 016885 38 QDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSG----CRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVS 113 (381)
Q Consensus 38 ~~v~~~~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~----~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~ 113 (381)
+.+.|. .+|..|.+.++.|.+ ...+.||++||+++ +...+..+++.|+++||.|+++|+||||.|.+....
T Consensus 3 ~~~~~~-~~~~~l~g~~~~p~~----~~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~~~ 77 (274)
T TIGR03100 3 RALTFS-CEGETLVGVLHIPGA----SHTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGENLG 77 (274)
T ss_pred eeEEEE-cCCcEEEEEEEcCCC----CCCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCC
Confidence 456666 567889999999852 23467777777653 333456778999999999999999999999765322
Q ss_pred CCcchhhHHHHHHHHHHhcC-CCCcEEEEEEchhHHHHHHhhccCCCccEEEeccCccCHHH-----HHHHHHHHh----
Q 016885 114 LGWHEKDDLKVVVSYLRGNK-QTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFD-----LMLELVDVY---- 183 (381)
Q Consensus 114 ~~~~~~~d~~~~i~~l~~~~-~~~~i~l~G~S~GG~~a~~~a~~~p~v~~vi~~~~~~~~~~-----~~~~~~~~~---- 183 (381)
.. ...+|+.++++++++.. +.++|+++||||||.+++.+|...+.++++|+++|+..... .........
T Consensus 78 ~~-~~~~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~~~~v~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~~ 156 (274)
T TIGR03100 78 FE-GIDADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPADLRVAGLVLLNPWVRTEAAQAASRIRHYYLGQLLSA 156 (274)
T ss_pred HH-HHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhhCCCccEEEEECCccCCcccchHHHHHHHHHHHHhCh
Confidence 11 22578999999998764 45889999999999999999876666999999998854221 111110000
Q ss_pred ---hhhCC-cccHHHHHHHHHHHhh-h--h---hhccccccchhhcCCCCCCcEEEEeeCCCCccChHH-----HHHHHH
Q 016885 184 ---KIRLP-KFTVKMAVQYMRRVIQ-K--K---AKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARH-----SDLIFN 248 (381)
Q Consensus 184 ---~~~~~-~~~~~~~~~~~~~~~~-~--~---~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~-----~~~l~~ 248 (381)
....+ .+........+..... . . .............+.++++|+++++|..|...+.-. +....+
T Consensus 157 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~ll~~g~~D~~~~~~~~~~~~~~~~~~ 236 (274)
T TIGR03100 157 DFWRKLLSGEVNLGSSLRGLGDALLKARQKGDEVAHGGLAERMKAGLERFQGPVLFILSGNDLTAQEFADSVLGEPAWRG 236 (274)
T ss_pred HHHHHhcCCCccHHHHHHHHHHHHHhhhhcCCCcccchHHHHHHHHHHhcCCcEEEEEcCcchhHHHHHHHhccChhhHH
Confidence 00000 0111101111111000 0 0 000001112234455678999999999998863211 133444
Q ss_pred HcC-CCceEEEeCC-CCCCC---ChhhHHHHHHHHHH
Q 016885 249 AYA-GDKNIIKFDG-DHNSS---RPQFYYDSVSIFFY 280 (381)
Q Consensus 249 ~~~-~~~~~~~~~g-gH~~~---~~~~~~~~i~~fl~ 280 (381)
.+. ..++++.+++ +|+.. .++++.+.|.+||+
T Consensus 237 ~l~~~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 237 ALEDPGIERVEIDGADHTFSDRVWREWVAARTTEWLR 273 (274)
T ss_pred HhhcCCeEEEecCCCCcccccHHHHHHHHHHHHHHHh
Confidence 443 4567888875 99864 45789999999985
No 33
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.89 E-value=1e-21 Score=173.89 Aligned_cols=204 Identities=13% Similarity=0.091 Sum_probs=132.9
Q ss_pred cEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchhhHHHHHHHHHHhcCCCCcEEEEEEchh
Q 016885 67 PCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMG 146 (381)
Q Consensus 67 p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~i~l~G~S~G 146 (381)
|.|||+||++++...|..++..|.+ .|.|+++|+||||.|.... . ...++ .++.+.+. ..++++++|||||
T Consensus 14 ~~ivllHG~~~~~~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~-~---~~~~~---~~~~l~~~-~~~~~~lvGhS~G 84 (256)
T PRK10349 14 VHLVLLHGWGLNAEVWRCIDEELSS-HFTLHLVDLPGFGRSRGFG-A---LSLAD---MAEAVLQQ-APDKAIWLGWSLG 84 (256)
T ss_pred CeEEEECCCCCChhHHHHHHHHHhc-CCEEEEecCCCCCCCCCCC-C---CCHHH---HHHHHHhc-CCCCeEEEEECHH
Confidence 5799999999999999999999976 5999999999999997532 1 11233 33333333 4589999999999
Q ss_pred HHHHHHhhccCCC-ccEEEeccCccCHH----------HHHHHHHHHhh--------hh-----CCcccHH-HHHHHHHH
Q 016885 147 AVTSLLYGAEDPS-IAGMVLDSAFSDLF----------DLMLELVDVYK--------IR-----LPKFTVK-MAVQYMRR 201 (381)
Q Consensus 147 G~~a~~~a~~~p~-v~~vi~~~~~~~~~----------~~~~~~~~~~~--------~~-----~~~~~~~-~~~~~~~~ 201 (381)
|.+++.+|.++|+ ++++|++++..... ........... .. ....... ....+...
T Consensus 85 g~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (256)
T PRK10349 85 GLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMGTETARQDARALKKT 164 (256)
T ss_pred HHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHHHHHccCchHHHHHHHHHHH
Confidence 9999999999998 99999987642210 00101100000 00 0000000 00000000
Q ss_pred Hhhhh--------hhc-cccccchhhcCCCCCCcEEEEeeCCCCccChHHHHHHHHHcCCCceEEEeCC-CCCCC--Chh
Q 016885 202 VIQKK--------AKF-DIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS--RPQ 269 (381)
Q Consensus 202 ~~~~~--------~~~-~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~g-gH~~~--~~~ 269 (381)
..... ... .....+....+.++++|+|+++|++|.++|.+.++.+.+.+++. +++++++ ||... .|+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i~~~-~~~~i~~~gH~~~~e~p~ 243 (256)
T PRK10349 165 VLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHS-ESYIFAKAAHAPFISHPA 243 (256)
T ss_pred hhccCCCcHHHHHHHHHHHHhCccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHHhCCCC-eEEEeCCCCCCccccCHH
Confidence 00000 000 00112344567789999999999999999999888888888765 6777876 99954 788
Q ss_pred hHHHHHHHHHH
Q 016885 270 FYYDSVSIFFY 280 (381)
Q Consensus 270 ~~~~~i~~fl~ 280 (381)
.+.+.+.+|-.
T Consensus 244 ~f~~~l~~~~~ 254 (256)
T PRK10349 244 EFCHLLVALKQ 254 (256)
T ss_pred HHHHHHHHHhc
Confidence 99999888753
No 34
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.88 E-value=1.5e-21 Score=171.39 Aligned_cols=210 Identities=17% Similarity=0.173 Sum_probs=134.5
Q ss_pred CCcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchhhHHHHHHHHHHhcCCCCcEEEEEEc
Q 016885 65 PLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRS 144 (381)
Q Consensus 65 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~i~l~G~S 144 (381)
..|+||++||++.+...|..+++.|. .||.|+++|+||||.|........ .+++.+.+..+.+..+.++++++|||
T Consensus 12 ~~~~li~~hg~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~---~~~~~~~~~~~i~~~~~~~v~liG~S 87 (251)
T TIGR02427 12 GAPVLVFINSLGTDLRMWDPVLPALT-PDFRVLRYDKRGHGLSDAPEGPYS---IEDLADDVLALLDHLGIERAVFCGLS 87 (251)
T ss_pred CCCeEEEEcCcccchhhHHHHHHHhh-cccEEEEecCCCCCCCCCCCCCCC---HHHHHHHHHHHHHHhCCCceEEEEeC
Confidence 57899999999999999988888886 489999999999999865433222 23333333333333356789999999
Q ss_pred hhHHHHHHhhccCCC-ccEEEeccCccCHHH--HHHHHH------------HH-hhh-hCCcc---cHHHHHHHHHHHhh
Q 016885 145 MGAVTSLLYGAEDPS-IAGMVLDSAFSDLFD--LMLELV------------DV-YKI-RLPKF---TVKMAVQYMRRVIQ 204 (381)
Q Consensus 145 ~GG~~a~~~a~~~p~-v~~vi~~~~~~~~~~--~~~~~~------------~~-~~~-~~~~~---~~~~~~~~~~~~~~ 204 (381)
|||.+++.+|.++|+ +++++++++...... ...... .. ... ....+ .......+......
T Consensus 88 ~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (251)
T TIGR02427 88 LGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADAVLERWFTPGFREAHPARLDLYRNMLVR 167 (251)
T ss_pred chHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHHHhhhhhccHHHHHHHHHHHHcccccccCChHHHHHHHHHHHh
Confidence 999999999999987 999998876432111 000000 00 000 00000 00000000000000
Q ss_pred hh-h-----hccccccchhhcCCCCCCcEEEEeeCCCCccChHHHHHHHHHcCCCceEEEeC-CCCCCC--ChhhHHHHH
Q 016885 205 KK-A-----KFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFD-GDHNSS--RPQFYYDSV 275 (381)
Q Consensus 205 ~~-~-----~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~-ggH~~~--~~~~~~~~i 275 (381)
.. . .......+....+.++++|+++++|++|.++|.+..+.+.+.+++. ++++++ +||... .++++.+.+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~p~~~~~~i 246 (251)
T TIGR02427 168 QPPDGYAGCCAAIRDADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLVPGA-RFAEIRGAGHIPCVEQPEAFNAAL 246 (251)
T ss_pred cCHHHHHHHHHHHhcccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhCCCc-eEEEECCCCCcccccChHHHHHHH
Confidence 00 0 0001122333556778999999999999999999888888888654 677777 599844 778888888
Q ss_pred HHHH
Q 016885 276 SIFF 279 (381)
Q Consensus 276 ~~fl 279 (381)
.+||
T Consensus 247 ~~fl 250 (251)
T TIGR02427 247 RDFL 250 (251)
T ss_pred HHHh
Confidence 8886
No 35
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.88 E-value=1.5e-21 Score=170.73 Aligned_cols=204 Identities=15% Similarity=0.105 Sum_probs=133.2
Q ss_pred CcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchhhHHHHHHHHHHhcCCCCcEEEEEEch
Q 016885 66 LPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSM 145 (381)
Q Consensus 66 ~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~i~l~G~S~ 145 (381)
.|.||++||++++...|..++..|.+ +|+|+++|+||+|.|..... .++.++++.+.+.. .++++++||||
T Consensus 4 ~~~iv~~HG~~~~~~~~~~~~~~l~~-~~~vi~~d~~G~G~s~~~~~-------~~~~~~~~~~~~~~-~~~~~lvG~S~ 74 (245)
T TIGR01738 4 NVHLVLIHGWGMNAEVFRCLDEELSA-HFTLHLVDLPGHGRSRGFGP-------LSLADAAEAIAAQA-PDPAIWLGWSL 74 (245)
T ss_pred CceEEEEcCCCCchhhHHHHHHhhcc-CeEEEEecCCcCccCCCCCC-------cCHHHHHHHHHHhC-CCCeEEEEEcH
Confidence 47899999999999999999998876 69999999999999865321 23334444444432 27899999999
Q ss_pred hHHHHHHhhccCCC-ccEEEeccCccCHH-----------HHHHHHHHHhhh------------h-CC-cccHHHHHHHH
Q 016885 146 GAVTSLLYGAEDPS-IAGMVLDSAFSDLF-----------DLMLELVDVYKI------------R-LP-KFTVKMAVQYM 199 (381)
Q Consensus 146 GG~~a~~~a~~~p~-v~~vi~~~~~~~~~-----------~~~~~~~~~~~~------------~-~~-~~~~~~~~~~~ 199 (381)
||.+++.++.++|+ ++++|++++..... .....+...... . .. .........+.
T Consensus 75 Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (245)
T TIGR01738 75 GGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTLGTPTARQDARALK 154 (245)
T ss_pred HHHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCccchHHHHHH
Confidence 99999999999998 99999887643211 001000000000 0 00 00000000000
Q ss_pred HHHhhhh--------hhc-cccccchhhcCCCCCCcEEEEeeCCCCccChHHHHHHHHHcCCCceEEEeCC-CCCCC--C
Q 016885 200 RRVIQKK--------AKF-DIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS--R 267 (381)
Q Consensus 200 ~~~~~~~--------~~~-~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~g-gH~~~--~ 267 (381)
....... ..+ .....+....+.++++|+++++|++|.++|.+..+.+.+.+++ .+++++++ ||... .
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~e~ 233 (245)
T TIGR01738 155 QTLLARPTPNVQVLQAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLAPH-SELYIFAKAAHAPFLSH 233 (245)
T ss_pred HHhhccCCCCHHHHHHHHHHhhcccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhCCC-CeEEEeCCCCCCccccC
Confidence 0000000 000 0111223345678999999999999999999988888888875 47778875 99844 7
Q ss_pred hhhHHHHHHHHH
Q 016885 268 PQFYYDSVSIFF 279 (381)
Q Consensus 268 ~~~~~~~i~~fl 279 (381)
++++.+.+.+|+
T Consensus 234 p~~~~~~i~~fi 245 (245)
T TIGR01738 234 AEAFCALLVAFK 245 (245)
T ss_pred HHHHHHHHHhhC
Confidence 889999998885
No 36
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.88 E-value=1.2e-20 Score=169.40 Aligned_cols=228 Identities=16% Similarity=0.204 Sum_probs=137.7
Q ss_pred CCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhcH-HHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchhhHHH
Q 016885 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADA-NEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLK 123 (381)
Q Consensus 45 ~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~-~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~ 123 (381)
.+|..+.+..+.+ .+..++||++||++++...+ ..+...+.+.||.|+++|+||+|.|............+++.
T Consensus 9 ~~~~~~~~~~~~~-----~~~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~ 83 (288)
T TIGR01250 9 VDGGYHLFTKTGG-----EGEKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFV 83 (288)
T ss_pred CCCCeEEEEeccC-----CCCCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHH
Confidence 4555555443321 23468899999987665554 44445555559999999999999997543221112234444
Q ss_pred HHHHHHHhcCCCCcEEEEEEchhHHHHHHhhccCCC-ccEEEeccCccCHHHHHHHHHHHhhhhCC--------------
Q 016885 124 VVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIRLP-------------- 188 (381)
Q Consensus 124 ~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~~~~~~~~~~~~~~~~~~-------------- 188 (381)
+.+..+.+..+.++++++||||||.+++.+|..+|+ ++++++.++............... ..++
T Consensus 84 ~~~~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 162 (288)
T TIGR01250 84 DELEEVREKLGLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSAPEYVKELNRLR-KELPPEVRAAIKRCEASG 162 (288)
T ss_pred HHHHHHHHHcCCCcEEEEEeehHHHHHHHHHHhCccccceeeEecccccchHHHHHHHHHH-hhcChhHHHHHHHHHhcc
Confidence 444445555566789999999999999999999998 999999887654322111100000 0000
Q ss_pred cccHHHHHHHHHHHh------------------hhh--hh---------c----cccccchhhcCCCCCCcEEEEeeCCC
Q 016885 189 KFTVKMAVQYMRRVI------------------QKK--AK---------F----DIMDLNCLKLAPKTFIPALFGHASED 235 (381)
Q Consensus 189 ~~~~~~~~~~~~~~~------------------~~~--~~---------~----~~~~~~~~~~~~~i~~Pvlii~G~~D 235 (381)
.+............. ... .. + .....+....+.++++|+++++|++|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D 242 (288)
T TIGR01250 163 DYDNPEYQEAVEVFYHHLLCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFTITGNLKDWDITDKLSEIKVPTLLTVGEFD 242 (288)
T ss_pred CcchHHHHHHHHHHHHHhhcccccchHHHHHHhhccCHHHHhcccCCccccccccccccCHHHHhhccCCCEEEEecCCC
Confidence 000000000000000 000 00 0 00111233456778999999999999
Q ss_pred CccChHHHHHHHHHcCCCceEEEeCC-CCCCC--ChhhHHHHHHHHHH
Q 016885 236 KFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFY 280 (381)
Q Consensus 236 ~~v~~~~~~~l~~~~~~~~~~~~~~g-gH~~~--~~~~~~~~i~~fl~ 280 (381)
.+ ++...+.+.+.+++. +++++++ ||+.. .++++.+.+.+||+
T Consensus 243 ~~-~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 243 TM-TPEAAREMQELIAGS-RLVVFPDGSHMTMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred cc-CHHHHHHHHHhccCC-eEEEeCCCCCCcccCCHHHHHHHHHHHhC
Confidence 85 567788888877654 6777775 99844 78899999999873
No 37
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.88 E-value=6.5e-21 Score=169.83 Aligned_cols=216 Identities=14% Similarity=0.185 Sum_probs=137.9
Q ss_pred CCCCcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcC-CCcchhhHHHHHHHHHHhcCCCCcEEEE
Q 016885 63 DTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVS-LGWHEKDDLKVVVSYLRGNKQTSRIGLW 141 (381)
Q Consensus 63 ~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~-~~~~~~~d~~~~i~~l~~~~~~~~i~l~ 141 (381)
++.+|.|||+||++++...|..++..|.++||.|+++|+||||.|...... .++. +....+.+++.+....++++|+
T Consensus 15 ~~~~p~vvliHG~~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~--~~~~~l~~~i~~l~~~~~v~lv 92 (273)
T PLN02211 15 NRQPPHFVLIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTTFD--EYNKPLIDFLSSLPENEKVILV 92 (273)
T ss_pred cCCCCeEEEECCCCCCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCCcccCCCHH--HHHHHHHHHHHhcCCCCCEEEE
Confidence 356789999999999999999999999888999999999999987543322 2221 3334445555544335899999
Q ss_pred EEchhHHHHHHhhccCCC-ccEEEeccCccC-----HHHHHHHHHH---Hhhh------hC-C----c---ccHHHHHHH
Q 016885 142 GRSMGAVTSLLYGAEDPS-IAGMVLDSAFSD-----LFDLMLELVD---VYKI------RL-P----K---FTVKMAVQY 198 (381)
Q Consensus 142 G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~-----~~~~~~~~~~---~~~~------~~-~----~---~~~~~~~~~ 198 (381)
||||||.+++.++..+|+ |+++|++++... .......... .... .. + . ........+
T Consensus 93 GhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (273)
T PLN02211 93 GHSAGGLSVTQAIHRFPKKICLAVYVAATMLKLGFQTDEDMKDGVPDLSEFGDVYELGFGLGPDQPPTSAIIKKEFRRKI 172 (273)
T ss_pred EECchHHHHHHHHHhChhheeEEEEeccccCCCCCCHHHHHhccccchhhhccceeeeeccCCCCCCceeeeCHHHHHHH
Confidence 999999999999998887 999999877532 1111100000 0000 00 0 0 000000100
Q ss_pred HHHHhhh-----------hhhcc-ccccchhhcCCCC-CCcEEEEeeCCCCccChHHHHHHHHHcCCCceEEEeCCCCCC
Q 016885 199 MRRVIQK-----------KAKFD-IMDLNCLKLAPKT-FIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDGDHNS 265 (381)
Q Consensus 199 ~~~~~~~-----------~~~~~-~~~~~~~~~~~~i-~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~ggH~~ 265 (381)
....... ..... ...........++ ++|+++|.|++|..+|++..+.+.+.+++. +++.+++||..
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~~~~~~m~~~~~~~-~~~~l~~gH~p 251 (273)
T PLN02211 173 LYQMSPQEDSTLAAMLLRPGPILALRSARFEEETGDIDKVPRVYIKTLHDHVVKPEQQEAMIKRWPPS-QVYELESDHSP 251 (273)
T ss_pred HhcCCCHHHHHHHHHhcCCcCccccccccccccccccCccceEEEEeCCCCCCCHHHHHHHHHhCCcc-EEEEECCCCCc
Confidence 0000000 00000 0011111122344 789999999999999999999999998765 67777899984
Q ss_pred --CChhhHHHHHHHHHHh
Q 016885 266 --SRPQFYYDSVSIFFYN 281 (381)
Q Consensus 266 --~~~~~~~~~i~~fl~~ 281 (381)
..|+++.+.|.+....
T Consensus 252 ~ls~P~~~~~~i~~~a~~ 269 (273)
T PLN02211 252 FFSTPFLLFGLLIKAAAS 269 (273)
T ss_pred cccCHHHHHHHHHHHHHH
Confidence 4888888888877644
No 38
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.88 E-value=2.5e-20 Score=174.64 Aligned_cols=221 Identities=16% Similarity=0.140 Sum_probs=138.3
Q ss_pred CCCcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCc-chhh-HHH-HHHHHHHhcCCCCcEEE
Q 016885 64 TPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGW-HEKD-DLK-VVVSYLRGNKQTSRIGL 140 (381)
Q Consensus 64 ~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~-~~~~-d~~-~~i~~l~~~~~~~~i~l 140 (381)
+..|+||++||++++...|...+..|++ +|.|+++|+||||.|+........ .... .+. .+.+++. ..+.+++++
T Consensus 103 ~~~p~vvllHG~~~~~~~~~~~~~~L~~-~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~-~l~~~~~~l 180 (402)
T PLN02894 103 EDAPTLVMVHGYGASQGFFFRNFDALAS-RFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRK-AKNLSNFIL 180 (402)
T ss_pred CCCCEEEEECCCCcchhHHHHHHHHHHh-CCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHH-HcCCCCeEE
Confidence 4679999999999988888888888876 599999999999999754322111 1111 122 2333433 336689999
Q ss_pred EEEchhHHHHHHhhccCCC-ccEEEeccCccCHH---HH---HHH----H----HHHh--hhhCC--------cccHHHH
Q 016885 141 WGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLF---DL---MLE----L----VDVY--KIRLP--------KFTVKMA 195 (381)
Q Consensus 141 ~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~~~---~~---~~~----~----~~~~--~~~~~--------~~~~~~~ 195 (381)
+||||||++++.+|.++|+ ++++|++++..... .. ... . .... ....| .+.....
T Consensus 181 vGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gp~~~~l~ 260 (402)
T PLN02894 181 LGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESNFTPQKIIRGLGPWGPNLV 260 (402)
T ss_pred EEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcCCCHHHHHHhccchhHHHH
Confidence 9999999999999999997 99999987653111 00 000 0 0000 00000 0000000
Q ss_pred HH-------------------------HHHHHhhh----------hhhc-cccccchhhcCCCCCCcEEEEeeCCCCccC
Q 016885 196 VQ-------------------------YMRRVIQK----------KAKF-DIMDLNCLKLAPKTFIPALFGHASEDKFIR 239 (381)
Q Consensus 196 ~~-------------------------~~~~~~~~----------~~~~-~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~ 239 (381)
.. ++...... .... .....+....+.++++|+++++|++|.+.+
T Consensus 261 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP~liI~G~~D~i~~ 340 (402)
T PLN02894 261 RRYTTARFGAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARKPLLESASEWKVPTTFIYGRHDWMNY 340 (402)
T ss_pred HHHHHHHhhhcccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhccCchhhcchHhhhcccCCCCEEEEEeCCCCCCc
Confidence 00 00000000 0000 011223335577889999999999998765
Q ss_pred hHHHHHHHHHcCCCceEEEeCC-CCCCC--ChhhHHHHHHHHHHhhcCCCC
Q 016885 240 ARHSDLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFYNVLHPPQ 287 (381)
Q Consensus 240 ~~~~~~l~~~~~~~~~~~~~~g-gH~~~--~~~~~~~~i~~fl~~~l~~~~ 287 (381)
.....+.+......+++++++ ||+.. .++++.+.+.+|++..+....
T Consensus 341 -~~~~~~~~~~~~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~~~~~~~~ 390 (402)
T PLN02894 341 -EGAVEARKRMKVPCEIIRVPQGGHFVFLDNPSGFHSAVLYACRKYLSPDR 390 (402)
T ss_pred -HHHHHHHHHcCCCCcEEEeCCCCCeeeccCHHHHHHHHHHHHHHhccCCc
Confidence 556666666654567888886 99843 789999999999999887644
No 39
>PRK07581 hypothetical protein; Validated
Probab=99.88 E-value=1.3e-20 Score=173.81 Aligned_cols=235 Identities=14% Similarity=0.095 Sum_probs=145.6
Q ss_pred CCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhcHHHHH---HHhccCCcEEEEeCCCCCCCCCCCCc---CCCcc--
Q 016885 46 RGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAA---VILLPSNITLFTLDFSGSGLSDGDYV---SLGWH-- 117 (381)
Q Consensus 46 dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~---~~l~~~G~~vi~~D~~G~G~S~~~~~---~~~~~-- 117 (381)
+|.++++..+-+ ...+..|+||++||++++...|..++ ..|...+|.|+++|+||||.|..... ..+..
T Consensus 24 ~~~~l~y~~~G~---~~~~~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 100 (339)
T PRK07581 24 PDARLAYKTYGT---LNAAKDNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARF 100 (339)
T ss_pred CCceEEEEecCc---cCCCCCCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCC
Confidence 455566554422 11134578888888887766665543 36666689999999999999974432 11111
Q ss_pred ----hhhHHHHHHHHHHhcCCCCc-EEEEEEchhHHHHHHhhccCCC-ccEEEeccCccCHHHHHH----HHHH------
Q 016885 118 ----EKDDLKVVVSYLRGNKQTSR-IGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLML----ELVD------ 181 (381)
Q Consensus 118 ----~~~d~~~~i~~l~~~~~~~~-i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~~~~~~~----~~~~------ 181 (381)
..+|+.+....+.+..+.++ ++|+||||||++|+.+|.++|+ |+++|++++......... ....
T Consensus 101 ~~~~~~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~~~~~~~~~~~~~l~~~~ 180 (339)
T PRK07581 101 PHVTIYDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTPHNFVFLEGLKAALTADP 180 (339)
T ss_pred CceeHHHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCHHHHHHHHHHHHHHHhCC
Confidence 24566655555666568888 5799999999999999999998 999999876543111000 0000
Q ss_pred --------------------Hhhh--------h---CCccc----HHHHHHHHHHHhhhhh------------hcccc--
Q 016885 182 --------------------VYKI--------R---LPKFT----VKMAVQYMRRVIQKKA------------KFDIM-- 212 (381)
Q Consensus 182 --------------------~~~~--------~---~~~~~----~~~~~~~~~~~~~~~~------------~~~~~-- 212 (381)
.... . ..... ................ .....
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 260 (339)
T PRK07581 181 AFNGGWYAEPPERGLRAHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDPNNLLAMLWTWQRGDISRN 260 (339)
T ss_pred CCCCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCcccHHHHHHHhhhcccccC
Confidence 0000 0 00000 0000000000000000 00000
Q ss_pred ---ccchhhcCCCCCCcEEEEeeCCCCccChHHHHHHHHHcCCCceEEEeCC--CCCCC--ChhhHHHHHHHHHHhhcC
Q 016885 213 ---DLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG--DHNSS--RPQFYYDSVSIFFYNVLH 284 (381)
Q Consensus 213 ---~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~g--gH~~~--~~~~~~~~i~~fl~~~l~ 284 (381)
..+....+.++++|+|+|+|++|.++|++.++.+.+.+++. +++++++ ||... .++.+...|.+||++.+.
T Consensus 261 ~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip~a-~l~~i~~~~GH~~~~~~~~~~~~~~~~~~~~~~~ 338 (339)
T PRK07581 261 PAYGGDLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALIPNA-ELRPIESIWGHLAGFGQNPADIAFIDAALKELLA 338 (339)
T ss_pred cccCCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCC-eEEEeCCCCCccccccCcHHHHHHHHHHHHHHHh
Confidence 01334567789999999999999999999999998888774 6777774 99744 788999999999998764
No 40
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.88 E-value=4.4e-21 Score=166.95 Aligned_cols=246 Identities=15% Similarity=0.093 Sum_probs=156.6
Q ss_pred ccccCcceeeEEEEEEcCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCC
Q 016885 28 FMLAGRSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLS 107 (381)
Q Consensus 28 ~~~~~~~~~~~~v~~~~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S 107 (381)
+....+++..+.+.+. ++..+......+ ....+..+|++||+|+....|..-...|++ .+.|+++|++|+|.|
T Consensus 58 l~~~~v~~~~~~v~i~--~~~~iw~~~~~~----~~~~~~plVliHGyGAg~g~f~~Nf~~La~-~~~vyaiDllG~G~S 130 (365)
T KOG4409|consen 58 LSSVPVPYSKKYVRIP--NGIEIWTITVSN----ESANKTPLVLIHGYGAGLGLFFRNFDDLAK-IRNVYAIDLLGFGRS 130 (365)
T ss_pred hhhcCCCcceeeeecC--CCceeEEEeecc----cccCCCcEEEEeccchhHHHHHHhhhhhhh-cCceEEecccCCCCC
Confidence 3345566766666555 555555444433 346788999999999999988888888888 799999999999999
Q ss_pred CCCCcCCCcch-hhHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhhccCCC-ccEEEeccCccCHHH-----------
Q 016885 108 DGDYVSLGWHE-KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFD----------- 174 (381)
Q Consensus 108 ~~~~~~~~~~~-~~d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~~~~----------- 174 (381)
+.......... ...+.+.++..+...+.++.+|+|||+||+++..+|.++|+ |+.+|+++|..-...
T Consensus 131 SRP~F~~d~~~~e~~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~ 210 (365)
T KOG4409|consen 131 SRPKFSIDPTTAEKEFVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPP 210 (365)
T ss_pred CCCCCCCCcccchHHHHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCC
Confidence 97665554332 34556666666666688999999999999999999999998 999999998652210
Q ss_pred --HHHHHHHHhhhh--------CCcccHHHHHHHHHHHhhhhh-------------------------------hccccc
Q 016885 175 --LMLELVDVYKIR--------LPKFTVKMAVQYMRRVIQKKA-------------------------------KFDIMD 213 (381)
Q Consensus 175 --~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~-------------------------------~~~~~~ 213 (381)
............ ...+..+....+..+...... ...+.+
T Consensus 211 ~~w~~~~~~~~~~~nPl~~LR~~Gp~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar 290 (365)
T KOG4409|consen 211 PEWYKALFLVATNFNPLALLRLMGPLGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWAR 290 (365)
T ss_pred hHHHhhhhhhhhcCCHHHHHHhccccchHHHhhhhHHHHHhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchhh
Confidence 000000000000 000000111111111100000 000111
Q ss_pred cchhhcCCCCC--CcEEEEeeCCCCccChHHHHHHHHHc-CCCceEEEeCC-CCC--CCChhhHHHHHHHHHHh
Q 016885 214 LNCLKLAPKTF--IPALFGHASEDKFIRARHSDLIFNAY-AGDKNIIKFDG-DHN--SSRPQFYYDSVSIFFYN 281 (381)
Q Consensus 214 ~~~~~~~~~i~--~Pvlii~G~~D~~v~~~~~~~l~~~~-~~~~~~~~~~g-gH~--~~~~~~~~~~i~~fl~~ 281 (381)
....+.+..++ ||+++|+|++|.+= .....++.+.+ ...++++++++ ||+ ..+|+.+.+.+..+++.
T Consensus 291 ~Pm~~r~~~l~~~~pv~fiyG~~dWmD-~~~g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~Fn~~v~~~~~~ 363 (365)
T KOG4409|consen 291 RPMIQRLRELKKDVPVTFIYGDRDWMD-KNAGLEVTKSLMKEYVEIIIVPGAGHHVYLDNPEFFNQIVLEECDK 363 (365)
T ss_pred hhHHHHHHhhccCCCEEEEecCccccc-chhHHHHHHHhhcccceEEEecCCCceeecCCHHHHHHHHHHHHhc
Confidence 12234444444 99999999999654 44555555543 44467888887 998 34899999999888864
No 41
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.88 E-value=1.5e-20 Score=168.95 Aligned_cols=223 Identities=15% Similarity=0.188 Sum_probs=138.8
Q ss_pred CCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchhhHHHH
Q 016885 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKV 124 (381)
Q Consensus 45 ~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~ 124 (381)
.+|.++++..+ +..|+|||+||++.+...|..++..|.+ +|+|+++|+||||.|+.... .. ...++..+
T Consensus 21 ~~~~~i~y~~~--------G~~~~iv~lHG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~-~~-~~~~~~~~ 89 (286)
T PRK03204 21 SSRGRIHYIDE--------GTGPPILLCHGNPTWSFLYRDIIVALRD-RFRCVAPDYLGFGLSERPSG-FG-YQIDEHAR 89 (286)
T ss_pred cCCcEEEEEEC--------CCCCEEEEECCCCccHHHHHHHHHHHhC-CcEEEEECCCCCCCCCCCCc-cc-cCHHHHHH
Confidence 36667764432 3458999999999888888888888876 69999999999999975332 11 22466666
Q ss_pred HHHHHHhcCCCCcEEEEEEchhHHHHHHhhccCCC-ccEEEeccCccCHH----H-HHHHHHHH------------h-hh
Q 016885 125 VVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLF----D-LMLELVDV------------Y-KI 185 (381)
Q Consensus 125 ~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~~~----~-~~~~~~~~------------~-~~ 185 (381)
.+..+.+..+.++++++||||||.+++.++..+|+ ++++|++++..... . ........ . ..
T Consensus 90 ~~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (286)
T PRK03204 90 VIGEFVDHLGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADTLAMKAFSRVMSSPPVQYAILRRNFFVER 169 (286)
T ss_pred HHHHHHHHhCCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccccCCCchhHHHHHHHhccccchhhhhhhhHHHHH
Confidence 66666666677899999999999999999999987 99999877643110 0 00000000 0 00
Q ss_pred hCC-----cccHHHHHHHHH--------HHh-hhhhhccccc---cchhhcCC--CCCCcEEEEeeCCCCccChH-HHHH
Q 016885 186 RLP-----KFTVKMAVQYMR--------RVI-QKKAKFDIMD---LNCLKLAP--KTFIPALFGHASEDKFIRAR-HSDL 245 (381)
Q Consensus 186 ~~~-----~~~~~~~~~~~~--------~~~-~~~~~~~~~~---~~~~~~~~--~i~~Pvlii~G~~D~~v~~~-~~~~ 245 (381)
..+ .........+.. ... .....+.... ......+. .+++|+++|+|++|.++++. ..+.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI~G~~D~~~~~~~~~~~ 249 (286)
T PRK03204 170 LIPAGTEHRPSSAVMAHYRAVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLVWGMKDVAFRPKTILPR 249 (286)
T ss_pred hccccccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEEecCCCcccCcHHHHHH
Confidence 000 000000000000 000 0000000000 00000111 12799999999999988655 5677
Q ss_pred HHHHcCCCceEEEeCC-CCCCC--ChhhHHHHHHHHH
Q 016885 246 IFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFF 279 (381)
Q Consensus 246 l~~~~~~~~~~~~~~g-gH~~~--~~~~~~~~i~~fl 279 (381)
+.+.+++. +++++++ ||... .|+++.+.+.+||
T Consensus 250 ~~~~ip~~-~~~~i~~aGH~~~~e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 250 LRATFPDH-VLVELPNAKHFIQEDAPDRIAAAIIERF 285 (286)
T ss_pred HHHhcCCC-eEEEcCCCcccccccCHHHHHHHHHHhc
Confidence 78888764 7777875 99954 8899999999987
No 42
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.87 E-value=1.7e-21 Score=168.14 Aligned_cols=202 Identities=20% Similarity=0.254 Sum_probs=129.0
Q ss_pred EEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchhhHHHHHHHHHHhcCCCCcEEEEEEchhHH
Q 016885 69 VVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAV 148 (381)
Q Consensus 69 vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~i~l~G~S~GG~ 148 (381)
|||+||++++...|..+++.|+ +||.|+++|+||+|.|........ ...++..+.+..+.+..+.++++++|||+||.
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~-~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~ 78 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALA-RGYRVIAFDLPGHGRSDPPPDYSP-YSIEDYAEDLAELLDALGIKKVILVGHSMGGM 78 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHH-TTSEEEEEECTTSTTSSSHSSGSG-GSHHHHHHHHHHHHHHTTTSSEEEEEETHHHH
T ss_pred eEEECCCCCCHHHHHHHHHHHh-CCCEEEEEecCCccccccccccCC-cchhhhhhhhhhcccccccccccccccccccc
Confidence 7999999999999999999995 799999999999999986543111 11222222232333333558999999999999
Q ss_pred HHHHhhccCCC-ccEEEeccCccCHHHHH---------HHHHHHhhhhCCc---------ccHHHHHHHHHHHhhhhhh-
Q 016885 149 TSLLYGAEDPS-IAGMVLDSAFSDLFDLM---------LELVDVYKIRLPK---------FTVKMAVQYMRRVIQKKAK- 208 (381)
Q Consensus 149 ~a~~~a~~~p~-v~~vi~~~~~~~~~~~~---------~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~- 208 (381)
+++.++.++|+ |+++|++++........ ............. ...................
T Consensus 79 ~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (228)
T PF12697_consen 79 IALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLASRFFYRWFDGDEPEDLIRSSRRALAEY 158 (228)
T ss_dssp HHHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccceeecccccccccccccccchhhhhhhhccccccccccccccccccccccccccccccccccccc
Confidence 99999999997 99999999988654321 1111100000000 0000001111110000000
Q ss_pred cc--ccccchhhcCCCCCCcEEEEeeCCCCccChHHHHHHHHHcCCCceEEEeCC-CCCCC--ChhhHHH
Q 016885 209 FD--IMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYD 273 (381)
Q Consensus 209 ~~--~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~g-gH~~~--~~~~~~~ 273 (381)
+. ....+....++++++|+++++|++|.+++.+..+.+.+.+++ .+++++++ ||... .|+++.+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~p~~~~~ 227 (228)
T PF12697_consen 159 LRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKLPN-AELVVIPGAGHFLFLEQPDEVAE 227 (228)
T ss_dssp HHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHSTT-EEEEEETTSSSTHHHHSHHHHHH
T ss_pred cccccccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHCCC-CEEEEECCCCCccHHHCHHHHhc
Confidence 00 011233355667789999999999999998899999888865 58888886 99843 5555543
No 43
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.87 E-value=3.7e-20 Score=168.16 Aligned_cols=233 Identities=17% Similarity=0.186 Sum_probs=143.6
Q ss_pred EEEcCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchhh
Q 016885 41 EIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKD 120 (381)
Q Consensus 41 ~~~~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~ 120 (381)
.+...+|.++.+..+ +....+.||++||+.++...+ .....+...+|+|+++|+||||.|........ ...+
T Consensus 8 ~~~~~~~~~l~y~~~------g~~~~~~lvllHG~~~~~~~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~-~~~~ 79 (306)
T TIGR01249 8 YLNVSDNHQLYYEQS------GNPDGKPVVFLHGGPGSGTDP-GCRRFFDPETYRIVLFDQRGCGKSTPHACLEE-NTTW 79 (306)
T ss_pred eEEcCCCcEEEEEEC------cCCCCCEEEEECCCCCCCCCH-HHHhccCccCCEEEEECCCCCCCCCCCCCccc-CCHH
Confidence 355567888887553 222356799999988765542 34445556689999999999999975432111 1234
Q ss_pred HHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhhccCCC-ccEEEeccCccCHHHHHH------------HHHHHhhhhC
Q 016885 121 DLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLML------------ELVDVYKIRL 187 (381)
Q Consensus 121 d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~~~~~~~------------~~~~~~~~~~ 187 (381)
++.+.+..+.+..+.++++++||||||.+++.++.++|+ ++++|++++......... .....+....
T Consensus 80 ~~~~dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (306)
T TIGR01249 80 DLVADIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLLREKEWSWFYEGGASMIYPDAWQRFMDSI 159 (306)
T ss_pred HHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccCCHHHHHHHHhcchhhhCHHHHHHHhhhC
Confidence 555555666655577899999999999999999999997 999999876543211000 0000000000
Q ss_pred Cccc--HHHHHHH--------------H----HHHhh-hhh--------------------hc--------ccc--ccch
Q 016885 188 PKFT--VKMAVQY--------------M----RRVIQ-KKA--------------------KF--------DIM--DLNC 216 (381)
Q Consensus 188 ~~~~--~~~~~~~--------------~----~~~~~-~~~--------------------~~--------~~~--~~~~ 216 (381)
+... ......+ . ..+.. ... .+ ... ....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (306)
T TIGR01249 160 PENERNEQLVNAYHDRLQSGDEETKLAAAKAWVDWESTTLLRPINEIVSTAEDFKFSLAFARLENHYFVNKGFLDVENFI 239 (306)
T ss_pred ChhhhhccHHHHHHHHccCCCHHHHHHHHHHHHHHhChhhcCCCCCccccccchHHHHHHHHHHHhHHHHhchhcCchHH
Confidence 0000 0000000 0 00000 000 00 000 0001
Q ss_pred hhcCCCC-CCcEEEEeeCCCCccChHHHHHHHHHcCCCceEEEeCC-CCCCCChhhHHHHHHHHHHhhc
Q 016885 217 LKLAPKT-FIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSSRPQFYYDSVSIFFYNVL 283 (381)
Q Consensus 217 ~~~~~~i-~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~g-gH~~~~~~~~~~~i~~fl~~~l 283 (381)
...+.++ ++|+|+++|.+|.++|.+.+..+++.+++ .+++++++ ||....+ +..+.+.+|+...|
T Consensus 240 ~~~~~~i~~~P~lii~g~~D~~~p~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~-~~~~~i~~~~~~~~ 306 (306)
T TIGR01249 240 LDNISKIRNIPTYIVHGRYDLCCPLQSAWALHKAFPE-AELKVTNNAGHSAFDP-NNLAALVHALETYL 306 (306)
T ss_pred HHhhhhccCCCeEEEecCCCCCCCHHHHHHHHHhCCC-CEEEEECCCCCCCCCh-HHHHHHHHHHHHhC
Confidence 2344566 59999999999999999999999999876 46777876 9997644 57788888887653
No 44
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.87 E-value=8e-21 Score=166.45 Aligned_cols=210 Identities=16% Similarity=0.207 Sum_probs=132.4
Q ss_pred CcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchhhHHHHH-HHHHHhcCCCCcEEEEEEc
Q 016885 66 LPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVV-VSYLRGNKQTSRIGLWGRS 144 (381)
Q Consensus 66 ~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~-i~~l~~~~~~~~i~l~G~S 144 (381)
+|+||++||++++...|..++..|+ .||.|+++|+||+|.|........ ...+++... +..+.+..+.++++++|||
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~G~S 78 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALIELLG-PHFRCLAIDLPGHGSSQSPDEIER-YDFEEAAQDILATLLDQLGIEPFFLVGYS 78 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHHHHhc-ccCeEEEEcCCCCCCCCCCCccCh-hhHHHHHHHHHHHHHHHcCCCeEEEEEec
Confidence 3789999999999999999999998 799999999999999975432111 122333333 5555555566899999999
Q ss_pred hhHHHHHHhhccCCC-ccEEEeccCccCHHHHHHHH---------HHHhhh-----------hCCc------ccHHHHHH
Q 016885 145 MGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLEL---------VDVYKI-----------RLPK------FTVKMAVQ 197 (381)
Q Consensus 145 ~GG~~a~~~a~~~p~-v~~vi~~~~~~~~~~~~~~~---------~~~~~~-----------~~~~------~~~~~~~~ 197 (381)
+||.+++.+|.++|+ +++++++++........... ...... ..+. ........
T Consensus 79 ~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (251)
T TIGR03695 79 MGGRIALYYALQYPERVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEAFLDDWYQQPLFASQKNLPPEQRQA 158 (251)
T ss_pred cHHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccHHHHHHhcCceeeecccCChHHhHH
Confidence 999999999999998 99999988754322110000 000000 0000 00000000
Q ss_pred HHHHHh--------hhhhhccc-cccchhhcCCCCCCcEEEEeeCCCCccChHHHHHHHHHcCCCceEEEeCC-CCCCC-
Q 016885 198 YMRRVI--------QKKAKFDI-MDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS- 266 (381)
Q Consensus 198 ~~~~~~--------~~~~~~~~-~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~g-gH~~~- 266 (381)
...... ........ ...+....+.++++|+++++|++|..++ +..+.+.+..++ .+++++++ ||...
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~~~-~~~~~~~~~gH~~~~ 236 (251)
T TIGR03695 159 LRAKRLANNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-QIAKEMQKLLPN-LTLVIIANAGHNIHL 236 (251)
T ss_pred HHHhcccccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHH-HHHHHHHhcCCC-CcEEEEcCCCCCcCc
Confidence 000000 00000000 0112224466789999999999998774 455566665544 57778886 99854
Q ss_pred -ChhhHHHHHHHHH
Q 016885 267 -RPQFYYDSVSIFF 279 (381)
Q Consensus 267 -~~~~~~~~i~~fl 279 (381)
.++++.+.+.+||
T Consensus 237 e~~~~~~~~i~~~l 250 (251)
T TIGR03695 237 ENPEAFAKILLAFL 250 (251)
T ss_pred cChHHHHHHHHHHh
Confidence 7788888888887
No 45
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.87 E-value=2.4e-20 Score=161.98 Aligned_cols=231 Identities=17% Similarity=0.164 Sum_probs=149.4
Q ss_pred EEcCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcch---
Q 016885 42 IRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE--- 118 (381)
Q Consensus 42 ~~~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~--- 118 (381)
+.+-+|..+++..- +.+..|+|+++||+.....+|+.....|+.+||+|+++|+||+|.|+.......+..
T Consensus 26 ~~~~~gI~~h~~e~------g~~~gP~illlHGfPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l 99 (322)
T KOG4178|consen 26 FVTYKGIRLHYVEG------GPGDGPIVLLLHGFPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTIDEL 99 (322)
T ss_pred eEEEccEEEEEEee------cCCCCCEEEEEccCCccchhhhhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeHHHH
Confidence 44455655443321 456789999999999999999999999999999999999999999986654333222
Q ss_pred hhHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhhccCCC-ccEEEeccCccC-----HHHHHH---------------
Q 016885 119 KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSD-----LFDLML--------------- 177 (381)
Q Consensus 119 ~~d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~-----~~~~~~--------------- 177 (381)
+.|+.++++.+ +.+++.++||+||+.+|..+|..+|+ |+++|+++.... ..+...
T Consensus 100 ~~di~~lld~L----g~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ~~ 175 (322)
T KOG4178|consen 100 VGDIVALLDHL----GLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYICLFQEP 175 (322)
T ss_pred HHHHHHHHHHh----ccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccchhhhhccccCccceeEecccc
Confidence 44555555544 68999999999999999999999998 999998775543 000000
Q ss_pred -------------HHHHHh-hhhCC---------c----ccHHHHHHHHHHHhhhhh------hccccccc---hhhcCC
Q 016885 178 -------------ELVDVY-KIRLP---------K----FTVKMAVQYMRRVIQKKA------KFDIMDLN---CLKLAP 221 (381)
Q Consensus 178 -------------~~~~~~-~~~~~---------~----~~~~~~~~~~~~~~~~~~------~~~~~~~~---~~~~~~ 221 (381)
...... ....+ . +......++......... .+...+.+ ......
T Consensus 176 ~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyrn~~r~w~a~~~~~~ 255 (322)
T KOG4178|consen 176 GKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYRNFRRNWEAAPWALA 255 (322)
T ss_pred CcchhhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhccccccccccchhhHHHhhCchhcccccc
Confidence 000000 00000 0 000111111111100000 00011111 134567
Q ss_pred CCCCcEEEEeeCCCCccChH-HHHHHHHHcCCCceEEEeCC-CCCCC--ChhhHHHHHHHHHHhh
Q 016885 222 KTFIPALFGHASEDKFIRAR-HSDLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFYNV 282 (381)
Q Consensus 222 ~i~~Pvlii~G~~D~~v~~~-~~~~l~~~~~~~~~~~~~~g-gH~~~--~~~~~~~~i~~fl~~~ 282 (381)
++++|+++++|..|.+.+.. ....+.+.++...+.+++++ ||+.. .|+++.+.+..|+++.
T Consensus 256 ~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 256 KITIPVLFIWGDLDPVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEKPQEVNQAILGFINSF 320 (322)
T ss_pred ccccceEEEEecCcccccchhHHHHHHHhhccccceEEecCCcccccccCHHHHHHHHHHHHHhh
Confidence 78999999999999999877 34444444566556677776 99854 8999999999999764
No 46
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.87 E-value=9.4e-21 Score=177.08 Aligned_cols=210 Identities=19% Similarity=0.160 Sum_probs=135.5
Q ss_pred CCCcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchhhHHHHHHHHHHhcCCCCcEEEEEE
Q 016885 64 TPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGR 143 (381)
Q Consensus 64 ~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~i~l~G~ 143 (381)
+..|+|||+||++++...|..++..|.+ +|+|+++|+||||.|........ ..++.+.+..+.+..+..+++++||
T Consensus 129 ~~~~~vl~~HG~~~~~~~~~~~~~~l~~-~~~v~~~d~~g~G~s~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~lvG~ 204 (371)
T PRK14875 129 GDGTPVVLIHGFGGDLNNWLFNHAALAA-GRPVIALDLPGHGASSKAVGAGS---LDELAAAVLAFLDALGIERAHLVGH 204 (371)
T ss_pred CCCCeEEEECCCCCccchHHHHHHHHhc-CCEEEEEcCCCCCCCCCCCCCCC---HHHHHHHHHHHHHhcCCccEEEEee
Confidence 4568999999999999999999988876 59999999999999965433222 3455555555555556689999999
Q ss_pred chhHHHHHHhhccCCC-ccEEEeccCccCHHHHHHHHH-------------HHhhhh--CC-cccHHHHHHHHH------
Q 016885 144 SMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELV-------------DVYKIR--LP-KFTVKMAVQYMR------ 200 (381)
Q Consensus 144 S~GG~~a~~~a~~~p~-v~~vi~~~~~~~~~~~~~~~~-------------~~~~~~--~~-~~~~~~~~~~~~------ 200 (381)
|+||.+++.+|..+|. +++++++++..........+. ...... .+ ..........+.
T Consensus 205 S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (371)
T PRK14875 205 SMGGAVALRLAARAPQRVASLTLIAPAGLGPEINGDYIDGFVAAESRRELKPVLELLFADPALVTRQMVEDLLKYKRLDG 284 (371)
T ss_pred chHHHHHHHHHHhCchheeEEEEECcCCcCcccchhHHHHhhcccchhHHHHHHHHHhcChhhCCHHHHHHHHHHhcccc
Confidence 9999999999999886 999999887532111000000 000000 00 000000000000
Q ss_pred ------HHhhhhhhccccccchhhcCCCCCCcEEEEeeCCCCccChHHHHHHHHHcCCCceEEEeCC-CCCCC--ChhhH
Q 016885 201 ------RVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS--RPQFY 271 (381)
Q Consensus 201 ------~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~g-gH~~~--~~~~~ 271 (381)
..............+....+.++++|+|+++|++|.++|.+.++.+ .....+.++++ ||+.. .++++
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~~l----~~~~~~~~~~~~gH~~~~e~p~~~ 360 (371)
T PRK14875 285 VDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHAQGL----PDGVAVHVLPGAGHMPQMEAAADV 360 (371)
T ss_pred HHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccCHHHHhhc----cCCCeEEEeCCCCCChhhhCHHHH
Confidence 0000000000011223345667899999999999999998866543 34467888885 99854 78888
Q ss_pred HHHHHHHHHh
Q 016885 272 YDSVSIFFYN 281 (381)
Q Consensus 272 ~~~i~~fl~~ 281 (381)
.+.|.+||++
T Consensus 361 ~~~i~~fl~~ 370 (371)
T PRK14875 361 NRLLAEFLGK 370 (371)
T ss_pred HHHHHHHhcc
Confidence 8888888864
No 47
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.87 E-value=5.7e-20 Score=169.89 Aligned_cols=227 Identities=14% Similarity=0.139 Sum_probs=142.9
Q ss_pred cCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCC-cchhhHH
Q 016885 44 NARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLG-WHEKDDL 122 (381)
Q Consensus 44 ~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~-~~~~~d~ 122 (381)
..+|.++.+... +....|.|||+||++++...|..++..|++ +|+|+++|+||||.|+....... ....+++
T Consensus 111 ~~~~~~~~y~~~------G~~~~~~ivllHG~~~~~~~w~~~~~~L~~-~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~ 183 (383)
T PLN03084 111 SSDLFRWFCVES------GSNNNPPVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLGFGFSDKPQPGYGFNYTLDEY 183 (383)
T ss_pred cCCceEEEEEec------CCCCCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCcccccccCCHHHH
Confidence 467777765432 223468999999999999999999998876 79999999999999986543211 1123343
Q ss_pred HHHHHHHHhcCCCCcEEEEEEchhHHHHHHhhccCCC-ccEEEeccCccCH-----HHHHHHHHHHh-h---hh------
Q 016885 123 KVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDL-----FDLMLELVDVY-K---IR------ 186 (381)
Q Consensus 123 ~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~~-----~~~~~~~~~~~-~---~~------ 186 (381)
.+.+..+.+..+.+++.|+|||+||.+++.+|..+|+ |+++|++++.... ......+.... . ..
T Consensus 184 a~~l~~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p~~l~~~~~~l~~~~~~~~~~~~~ 263 (383)
T PLN03084 184 VSSLESLIDELKSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLPSTLSEFSNFLLGEIFSQDPLRAS 263 (383)
T ss_pred HHHHHHHHHHhCCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccccchHHHHHHHHHHhhhhhhcchHHHH
Confidence 3333333333466899999999999999999999998 9999999876431 11111000000 0 00
Q ss_pred ---C----Cc-ccHHHHHHHHHH-------------Hhhhhhhcccccc--chhh--cCCCCCCcEEEEeeCCCCccChH
Q 016885 187 ---L----PK-FTVKMAVQYMRR-------------VIQKKAKFDIMDL--NCLK--LAPKTFIPALFGHASEDKFIRAR 241 (381)
Q Consensus 187 ---~----~~-~~~~~~~~~~~~-------------~~~~~~~~~~~~~--~~~~--~~~~i~~Pvlii~G~~D~~v~~~ 241 (381)
+ +. ........+... ..... ....... .... ....+++|+++++|+.|.+++.+
T Consensus 264 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~-~~~l~~~~~~l~~~l~~~~i~vPvLiI~G~~D~~v~~~ 342 (383)
T PLN03084 264 DKALTSCGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSM-KKELKKYIEEMRSILTDKNWKTPITVCWGLRDRWLNYD 342 (383)
T ss_pred hhhhcccCccCCCHHHHHHHhccccCCcchHHHHHHHHHHh-hcccchhhHHHHhhhccccCCCCEEEEeeCCCCCcCHH
Confidence 0 00 000000000000 00000 0000000 0001 11357899999999999999999
Q ss_pred HHHHHHHHcCCCceEEEeCC-CCCCC--ChhhHHHHHHHHHH
Q 016885 242 HSDLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFY 280 (381)
Q Consensus 242 ~~~~l~~~~~~~~~~~~~~g-gH~~~--~~~~~~~~i~~fl~ 280 (381)
.++.+.+.. ..+++++++ ||... .|+++.+.|.+||.
T Consensus 343 ~~~~~a~~~--~a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~ 382 (383)
T PLN03084 343 GVEDFCKSS--QHKLIELPMAGHHVQEDCGEELGGIISGILS 382 (383)
T ss_pred HHHHHHHhc--CCeEEEECCCCCCcchhCHHHHHHHHHHHhh
Confidence 888888873 347788876 99855 78999999999985
No 48
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.87 E-value=1.1e-20 Score=165.78 Aligned_cols=203 Identities=16% Similarity=0.207 Sum_probs=125.3
Q ss_pred CcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchhhHHHHHHHHHHhcCCCCcEEEEEEch
Q 016885 66 LPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSM 145 (381)
Q Consensus 66 ~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~i~l~G~S~ 145 (381)
.|+|||+||++++...|..++..| + +|+|+++|+||||.|...... . .+++.+.+..+.+..+.++++++||||
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l-~-~~~vi~~D~~G~G~S~~~~~~-~---~~~~~~~l~~~l~~~~~~~~~lvG~S~ 75 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEAL-P-DYPRLYIDLPGHGGSAAISVD-G---FADVSRLLSQTLQSYNILPYWLVGYSL 75 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHc-C-CCCEEEecCCCCCCCCCcccc-C---HHHHHHHHHHHHHHcCCCCeEEEEECH
Confidence 478999999999999999999988 3 699999999999999754321 2 223222232222333678999999999
Q ss_pred hHHHHHHhhccCC-C-ccEEEeccCccCHHH---HHHHHH--HHhhhhCCccc-HHHHH-----------------HHHH
Q 016885 146 GAVTSLLYGAEDP-S-IAGMVLDSAFSDLFD---LMLELV--DVYKIRLPKFT-VKMAV-----------------QYMR 200 (381)
Q Consensus 146 GG~~a~~~a~~~p-~-v~~vi~~~~~~~~~~---~~~~~~--~~~~~~~~~~~-~~~~~-----------------~~~~ 200 (381)
||.+++.+|.+++ + ++++++.++...... ...... ..+...+.... ..... .+..
T Consensus 76 Gg~va~~~a~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (242)
T PRK11126 76 GGRIAMYYACQGLAGGLCGLIVEGGNPGLQNAEERQARWQNDRQWAQRFRQEPLEQVLADWYQQPVFASLNAEQRQQLVA 155 (242)
T ss_pred HHHHHHHHHHhCCcccccEEEEeCCCCCCCCHHHHHHHHhhhHHHHHHhccCcHHHHHHHHHhcchhhccCccHHHHHHH
Confidence 9999999999985 4 999999876543211 000000 00000000000 00000 0000
Q ss_pred HHhh----h-hhh---cc-ccccchhhcCCCCCCcEEEEeeCCCCccChHHHHHHHHHcCCCceEEEeCC-CCCCC--Ch
Q 016885 201 RVIQ----K-KAK---FD-IMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS--RP 268 (381)
Q Consensus 201 ~~~~----~-~~~---~~-~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~g-gH~~~--~~ 268 (381)
.... . ... .. ....+....+.++++|+++++|++|..+. .+.+.. ..+++++++ ||... .|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~~--~~~~~~i~~~gH~~~~e~p 228 (242)
T PRK11126 156 KRSNNNGAAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ-----ALAQQL--ALPLHVIPNAGHNAHRENP 228 (242)
T ss_pred hcccCCHHHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH-----HHHHHh--cCeEEEeCCCCCchhhhCh
Confidence 0000 0 000 00 01112335677899999999999998652 223332 457888886 99854 88
Q ss_pred hhHHHHHHHHHHh
Q 016885 269 QFYYDSVSIFFYN 281 (381)
Q Consensus 269 ~~~~~~i~~fl~~ 281 (381)
+++.+.|.+||..
T Consensus 229 ~~~~~~i~~fl~~ 241 (242)
T PRK11126 229 AAFAASLAQILRL 241 (242)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999999864
No 49
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.86 E-value=5.6e-21 Score=153.92 Aligned_cols=143 Identities=30% Similarity=0.462 Sum_probs=119.3
Q ss_pred EEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchhhHHHHHHHHHHh-cCCCCcEEEEEEchh
Q 016885 68 CVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRG-NKQTSRIGLWGRSMG 146 (381)
Q Consensus 68 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~i~~l~~-~~~~~~i~l~G~S~G 146 (381)
+||++||++++...|..+++.|+++||.|+.+|+||+|.+.+ ..++.++++++.. ..+.++|+++|||+|
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~i~l~G~S~G 71 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQGYAVVAFDYPGHGDSDG---------ADAVERVLADIRAGYPDPDRIILIGHSMG 71 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHTTEEEEEESCTTSTTSHH---------SHHHHHHHHHHHHHHCTCCEEEEEEETHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCCccch---------hHHHHHHHHHHHhhcCCCCcEEEEEEccC
Confidence 589999999999999999999999999999999999998732 2466777777633 235699999999999
Q ss_pred HHHHHHhhccCCCccEEEeccCccCHHHHHHHHHHHhhhhCCcccHHHHHHHHHHHhhhhhhccccccchhhcCCCCCCc
Q 016885 147 AVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIP 226 (381)
Q Consensus 147 G~~a~~~a~~~p~v~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P 226 (381)
|.+++.++.++++++++|+++++.. ...+.+.++|
T Consensus 72 g~~a~~~~~~~~~v~~~v~~~~~~~---------------------------------------------~~~~~~~~~p 106 (145)
T PF12695_consen 72 GAIAANLAARNPRVKAVVLLSPYPD---------------------------------------------SEDLAKIRIP 106 (145)
T ss_dssp HHHHHHHHHHSTTESEEEEESESSG---------------------------------------------CHHHTTTTSE
T ss_pred cHHHHHHhhhccceeEEEEecCccc---------------------------------------------hhhhhccCCc
Confidence 9999999998888999999998311 0233456689
Q ss_pred EEEEeeCCCCccChHHHHHHHHHcCCCceEEEeCC-CCC
Q 016885 227 ALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHN 264 (381)
Q Consensus 227 vlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~g-gH~ 264 (381)
+++++|++|..++.+..++++++++.+++++++++ +|+
T Consensus 107 v~~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 107 VLFIHGENDPLVPPEQVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp EEEEEETT-SSSHHHHHHHHHHHHCSSEEEEEETTS-TT
T ss_pred EEEEEECCCCcCCHHHHHHHHHHcCCCcEEEEeCCCcCc
Confidence 99999999999999999999999998789999998 885
No 50
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.86 E-value=6.9e-21 Score=159.12 Aligned_cols=247 Identities=23% Similarity=0.261 Sum_probs=174.4
Q ss_pred cccccccccCcceeeEEEEEEcCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCC
Q 016885 23 LWERDFMLAGRSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFS 102 (381)
Q Consensus 23 ~~~~~~~~~~~~~~~~~v~~~~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~ 102 (381)
+.+..+++...+.- +++|+..+|.+|.+++.+|.. .+++.|+||-.||+++....|..+.. ++..||.|+.+|.|
T Consensus 44 l~~~d~~~~~ve~y--dvTf~g~~g~rI~gwlvlP~~--~~~~~P~vV~fhGY~g~~g~~~~~l~-wa~~Gyavf~MdvR 118 (321)
T COG3458 44 LERSDFTLPRVEVY--DVTFTGYGGARIKGWLVLPRH--EKGKLPAVVQFHGYGGRGGEWHDMLH-WAVAGYAVFVMDVR 118 (321)
T ss_pred EEeccccCCceEEE--EEEEeccCCceEEEEEEeecc--cCCccceEEEEeeccCCCCCcccccc-ccccceeEEEEecc
Confidence 44445566655544 899999999999999999973 44889999999999999887765554 55569999999999
Q ss_pred CCCCCCC----CCc---CCCc---------------chhhHHHHHHHHHHhcCCC--CcEEEEEEchhHHHHHHhhccCC
Q 016885 103 GSGLSDG----DYV---SLGW---------------HEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDP 158 (381)
Q Consensus 103 G~G~S~~----~~~---~~~~---------------~~~~d~~~~i~~l~~~~~~--~~i~l~G~S~GG~~a~~~a~~~p 158 (381)
|.|.|.. .+. ..++ ....|+..+++.+.+...+ +||++.|.|.||.+++.+++..|
T Consensus 119 GQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~ 198 (321)
T COG3458 119 GQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP 198 (321)
T ss_pred cCCCccccCCCCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh
Confidence 9987732 111 1111 1257888999999888766 89999999999999999999999
Q ss_pred CccEEEeccCccCHHHHHHHHHHHhhhhCCcccHHHHHHHHHHHhhh--hhhccccccchhhcCCCCCCcEEEEeeCCCC
Q 016885 159 SIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQK--KAKFDIMDLNCLKLAPKTFIPALFGHASEDK 236 (381)
Q Consensus 159 ~v~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~ 236 (381)
++++++++-|+.+-......+. ..-+......+++..-.. .....+.-.+....+.++++|+|+..|-.|+
T Consensus 199 rik~~~~~~Pfl~df~r~i~~~-------~~~~ydei~~y~k~h~~~e~~v~~TL~yfD~~n~A~RiK~pvL~svgL~D~ 271 (321)
T COG3458 199 RIKAVVADYPFLSDFPRAIELA-------TEGPYDEIQTYFKRHDPKEAEVFETLSYFDIVNLAARIKVPVLMSVGLMDP 271 (321)
T ss_pred hhhcccccccccccchhheeec-------ccCcHHHHHHHHHhcCchHHHHHHHHhhhhhhhHHHhhccceEEeecccCC
Confidence 9999999998865332211110 000111111121111100 0000111224446677899999999999999
Q ss_pred ccChHHHHHHHHHcCCCceEEEeCC-CCCCCChhhHHHHHHHHHHhh
Q 016885 237 FIRARHSDLIFNAYAGDKNIIKFDG-DHNSSRPQFYYDSVSIFFYNV 282 (381)
Q Consensus 237 ~v~~~~~~~l~~~~~~~~~~~~~~g-gH~~~~~~~~~~~i~~fl~~~ 282 (381)
++|+...-.+++++...+++.+++- +|... +....+.+..|+...
T Consensus 272 vcpPstqFA~yN~l~~~K~i~iy~~~aHe~~-p~~~~~~~~~~l~~l 317 (321)
T COG3458 272 VCPPSTQFAAYNALTTSKTIEIYPYFAHEGG-PGFQSRQQVHFLKIL 317 (321)
T ss_pred CCCChhhHHHhhcccCCceEEEeeccccccC-cchhHHHHHHHHHhh
Confidence 9999999999999999999999986 77743 334455577787654
No 51
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.86 E-value=7.3e-20 Score=158.58 Aligned_cols=262 Identities=19% Similarity=0.238 Sum_probs=163.4
Q ss_pred CCCC-cccccccccc-----------ccCcceeeEEEEEEcCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhc--
Q 016885 16 EYNP-DQYLWERDFM-----------LAGRSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD-- 81 (381)
Q Consensus 16 ~~~~-~~~~~~~~~~-----------~~~~~~~~~~v~~~~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~-- 81 (381)
.|+| +.++.+..++ .....+.++. +...||..+...+..+ +.....|.||++||+.|+..+
T Consensus 18 ~f~p~~~~L~ng~lqTl~~~~~~frr~~~~~~~re~--v~~pdg~~~~ldw~~~---p~~~~~P~vVl~HGL~G~s~s~y 92 (345)
T COG0429 18 PFDPLPWGLFNGHLQTLYPSLRLFRRKPKVAYTRER--LETPDGGFIDLDWSED---PRAAKKPLVVLFHGLEGSSNSPY 92 (345)
T ss_pred cCCCCcccccCcchhhhhhhHHHhhcccccccceEE--EEcCCCCEEEEeeccC---ccccCCceEEEEeccCCCCcCHH
Confidence 3455 5566665544 2234455554 5566777777666554 245677999999999877654
Q ss_pred HHHHHHHhccCCcEEEEeCCCCCCCCCC-CCcCCCcchhhHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhhcc-CCC
Q 016885 82 ANEAAVILLPSNITLFTLDFSGSGLSDG-DYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAE-DPS 159 (381)
Q Consensus 82 ~~~~~~~l~~~G~~vi~~D~~G~G~S~~-~~~~~~~~~~~d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~-~p~ 159 (381)
...+++.+.++||.|+++++|||+.+.. .+.-...-..+|+..++++++......++..+|+|+||.+...+..+ ..+
T Consensus 93 ~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh~G~t~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgeeg~d 172 (345)
T COG0429 93 ARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLYHSGETEDIRFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGEEGDD 172 (345)
T ss_pred HHHHHHHHHhcCCeEEEEecccccCCcccCcceecccchhHHHHHHHHHHHhCCCCceEEEEecccHHHHHHHHHhhccC
Confidence 4567888999999999999999988753 22222112259999999999998888999999999999555444444 333
Q ss_pred --ccEEEeccCccCHHHHHHHHHHHhh-----------------h---hC-CcccHHHHHHHHHHHhhhhhhcc------
Q 016885 160 --IAGMVLDSAFSDLFDLMLELVDVYK-----------------I---RL-PKFTVKMAVQYMRRVIQKKAKFD------ 210 (381)
Q Consensus 160 --v~~vi~~~~~~~~~~~~~~~~~~~~-----------------~---~~-~~~~~~~~~~~~~~~~~~~~~~~------ 210 (381)
+.+.+.+|.+.++......+...+. . .+ +..+... ...++++ .....|+
T Consensus 173 ~~~~aa~~vs~P~Dl~~~~~~l~~~~s~~ly~r~l~~~L~~~~~~kl~~l~~~~p~~~-~~~ik~~-~ti~eFD~~~Tap 250 (345)
T COG0429 173 LPLDAAVAVSAPFDLEACAYRLDSGFSLRLYSRYLLRNLKRNAARKLKELEPSLPGTV-LAAIKRC-RTIREFDDLLTAP 250 (345)
T ss_pred cccceeeeeeCHHHHHHHHHHhcCchhhhhhHHHHHHHHHHHHHHHHHhcCcccCcHH-HHHHHhh-chHHhccceeeec
Confidence 6777777766655332221111111 0 00 1111110 1111100 1111111
Q ss_pred ----------ccccchhhcCCCCCCcEEEEeeCCCCccChHHHHHHHHHcCCCceEEEeC-CCCCCC------Chh-hHH
Q 016885 211 ----------IMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFD-GDHNSS------RPQ-FYY 272 (381)
Q Consensus 211 ----------~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~-ggH~~~------~~~-~~~ 272 (381)
+...+..+.+++|.+|+||||+.+|++++++..-......++...+.+.+ |||... .+. -..
T Consensus 251 ~~Gf~da~dYYr~aSs~~~L~~Ir~PtLii~A~DDP~~~~~~iP~~~~~~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~ 330 (345)
T COG0429 251 LHGFADAEDYYRQASSLPLLPKIRKPTLIINAKDDPFMPPEVIPKLQEMLNPNVLLQLTEHGGHVGFLGGKLLHPQMWLE 330 (345)
T ss_pred ccCCCcHHHHHHhccccccccccccceEEEecCCCCCCChhhCCcchhcCCCceEEEeecCCceEEeccCccccchhhHH
Confidence 11235667889999999999999999999876666555455666666666 699832 222 345
Q ss_pred HHHHHHHHhhcC
Q 016885 273 DSVSIFFYNVLH 284 (381)
Q Consensus 273 ~~i~~fl~~~l~ 284 (381)
+.+.+||+..+.
T Consensus 331 ~ri~~~l~~~~~ 342 (345)
T COG0429 331 QRILDWLDPFLE 342 (345)
T ss_pred HHHHHHHHHHHh
Confidence 667888877654
No 52
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.86 E-value=6.9e-20 Score=165.64 Aligned_cols=217 Identities=16% Similarity=0.257 Sum_probs=144.1
Q ss_pred CCCcEEEEeCCCCCChhcHHHHHHHhccC-CcEEEEeCCCCCCCCCCCCcCCCcchhhHHHHHHHHHHhcCCCCcEEEEE
Q 016885 64 TPLPCVVYCHGNSGCRADANEAAVILLPS-NITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWG 142 (381)
Q Consensus 64 ~~~p~vv~~HG~~~~~~~~~~~~~~l~~~-G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~i~l~G 142 (381)
...|.||++||++++...|......|.+. |+.|+++|++|+|.++..+....++ ..+....+..+-......++.++|
T Consensus 56 ~~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~-~~~~v~~i~~~~~~~~~~~~~lvg 134 (326)
T KOG1454|consen 56 KDKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYT-LRELVELIRRFVKEVFVEPVSLVG 134 (326)
T ss_pred CCCCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCCCCCCcee-hhHHHHHHHHHHHhhcCcceEEEE
Confidence 57899999999999999999999888876 5999999999999655433333333 445555555444444667799999
Q ss_pred EchhHHHHHHhhccCCC-ccEEE---eccCccCHHH----HHHH----HHHHhhhhCCcc---cHH-----H--------
Q 016885 143 RSMGAVTSLLYGAEDPS-IAGMV---LDSAFSDLFD----LMLE----LVDVYKIRLPKF---TVK-----M-------- 194 (381)
Q Consensus 143 ~S~GG~~a~~~a~~~p~-v~~vi---~~~~~~~~~~----~~~~----~~~~~~~~~~~~---~~~-----~-------- 194 (381)
||+||.+|+.+|+.+|+ |++++ ++++.....+ .... .........|.. +.. .
T Consensus 135 hS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 214 (326)
T KOG1454|consen 135 HSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSALELLIPLSLTEPVRLVSEGLLRCLKVVY 214 (326)
T ss_pred eCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhhhhhccHhhhcCccccccchhheeHhhhcceeeec
Confidence 99999999999999999 99999 6555543211 1111 111111111100 000 0
Q ss_pred -----HHHHHHHHhhh--------hhhcccc------ccchhhcCCCCC-CcEEEEeeCCCCccChHHHHHHHHHcCCCc
Q 016885 195 -----AVQYMRRVIQK--------KAKFDIM------DLNCLKLAPKTF-IPALFGHASEDKFIRARHSDLIFNAYAGDK 254 (381)
Q Consensus 195 -----~~~~~~~~~~~--------~~~~~~~------~~~~~~~~~~i~-~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~ 254 (381)
........... .....+. +......++++. ||+|+++|+.|+++|.+.+..+.+.+ ...
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~~~~~~~~-pn~ 293 (326)
T KOG1454|consen 215 TDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPLELAEELKKKL-PNA 293 (326)
T ss_pred cccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhccccCCceEEEEcCcCCccCHHHHHHHHhhC-CCc
Confidence 00000000000 0000000 123334556666 99999999999999999999999988 455
Q ss_pred eEEEeCC-CCCCC--ChhhHHHHHHHHHHhh
Q 016885 255 NIIKFDG-DHNSS--RPQFYYDSVSIFFYNV 282 (381)
Q Consensus 255 ~~~~~~g-gH~~~--~~~~~~~~i~~fl~~~ 282 (381)
+++++++ ||... .|++++..|..|+.+.
T Consensus 294 ~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 294 ELVEIPGAGHLPHLERPEEVAALLRSFIARL 324 (326)
T ss_pred eEEEeCCCCcccccCCHHHHHHHHHHHHHHh
Confidence 8888885 99844 8999999999999765
No 53
>PRK11071 esterase YqiA; Provisional
Probab=99.85 E-value=3.1e-20 Score=155.86 Aligned_cols=181 Identities=13% Similarity=0.147 Sum_probs=123.4
Q ss_pred cEEEEeCCCCCChhcHHH--HHHHhcc--CCcEEEEeCCCCCCCCCCCCcCCCcchhhHHHHHHHHHHhcCCCCcEEEEE
Q 016885 67 PCVVYCHGNSGCRADANE--AAVILLP--SNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWG 142 (381)
Q Consensus 67 p~vv~~HG~~~~~~~~~~--~~~~l~~--~G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~i~l~G 142 (381)
|+||++||++++...|.. +...+.+ .+|.|+++|+||+| +++.+.+..+.+..+.++++++|
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~--------------~~~~~~l~~l~~~~~~~~~~lvG 67 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP--------------ADAAELLESLVLEHGGDPLGLVG 67 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH--------------HHHHHHHHHHHHHcCCCCeEEEE
Confidence 689999999999998873 3455554 37999999999985 23444555555555678999999
Q ss_pred EchhHHHHHHhhccCCCccEEEeccCccCHHHHHHHHHHHhhhhC-C-cccHHHHHHHHHHHhhhhhhccccccchhhcC
Q 016885 143 RSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRL-P-KFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLA 220 (381)
Q Consensus 143 ~S~GG~~a~~~a~~~p~v~~vi~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (381)
|||||.+++.+|.++| . .+|+++|..+..+.+........... + .+.. ...++... . ..+. ..+
T Consensus 68 ~S~Gg~~a~~~a~~~~-~-~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~d~----~-----~~~~-~~i 133 (190)
T PRK11071 68 SSLGGYYATWLSQCFM-L-PAVVVNPAVRPFELLTDYLGENENPYTGQQYVL--ESRHIYDL----K-----VMQI-DPL 133 (190)
T ss_pred ECHHHHHHHHHHHHcC-C-CEEEECCCCCHHHHHHHhcCCcccccCCCcEEE--cHHHHHHH----H-----hcCC-ccC
Confidence 9999999999999988 3 45778887775444443322111000 0 0110 01111111 0 1111 122
Q ss_pred CCCCCcEEEEeeCCCCccChHHHHHHHHHcCCCceEEEeCC-CCCCCChhhHHHHHHHHHH
Q 016885 221 PKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSSRPQFYYDSVSIFFY 280 (381)
Q Consensus 221 ~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~g-gH~~~~~~~~~~~i~~fl~ 280 (381)
. ..+|++++||.+|++||++.+.++++.. ..++++| +|.+...+++.+.+.+|+.
T Consensus 134 ~-~~~~v~iihg~~De~V~~~~a~~~~~~~----~~~~~~ggdH~f~~~~~~~~~i~~fl~ 189 (190)
T PRK11071 134 E-SPDLIWLLQQTGDEVLDYRQAVAYYAAC----RQTVEEGGNHAFVGFERYFNQIVDFLG 189 (190)
T ss_pred C-ChhhEEEEEeCCCCcCCHHHHHHHHHhc----ceEEECCCCcchhhHHHhHHHHHHHhc
Confidence 2 6688999999999999999999999853 4445676 9999888899999999974
No 54
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.85 E-value=4e-20 Score=171.15 Aligned_cols=233 Identities=12% Similarity=0.094 Sum_probs=142.9
Q ss_pred CCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhc-----------HHHHH---HHhccCCcEEEEeCCCC--CCCCC
Q 016885 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD-----------ANEAA---VILLPSNITLFTLDFSG--SGLSD 108 (381)
Q Consensus 45 ~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~-----------~~~~~---~~l~~~G~~vi~~D~~G--~G~S~ 108 (381)
.+|.+|.+..|-+. .....|+||++||++++... |..++ ..|...+|.|+++|+|| +|.|.
T Consensus 13 ~~~~~~~y~~~g~~---~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~ 89 (351)
T TIGR01392 13 LSDVRVAYETYGTL---NAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTG 89 (351)
T ss_pred cCCceEEEEecccc---CCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCC
Confidence 35677887777542 12345799999999997632 44443 36667799999999999 55553
Q ss_pred CC---CcC------CCcchhhHHHHHHHHHHhcCCCCc-EEEEEEchhHHHHHHhhccCCC-ccEEEeccCccCHHHH--
Q 016885 109 GD---YVS------LGWHEKDDLKVVVSYLRGNKQTSR-IGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDL-- 175 (381)
Q Consensus 109 ~~---~~~------~~~~~~~d~~~~i~~l~~~~~~~~-i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~~~~~-- 175 (381)
.. +.. .....++|+.+.+..+.+..+.++ ++++||||||.+++.+|.++|+ ++++|++++.......
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 169 (351)
T TIGR01392 90 PSSINPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARHSAWCI 169 (351)
T ss_pred CCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcCCHHHH
Confidence 21 110 001224566555555555557788 9999999999999999999998 9999998876532211
Q ss_pred -HHH-HHHHhhh-------hC-----CcccHHH--------------------------------------HHHHHH---
Q 016885 176 -MLE-LVDVYKI-------RL-----PKFTVKM--------------------------------------AVQYMR--- 200 (381)
Q Consensus 176 -~~~-~~~~~~~-------~~-----~~~~~~~--------------------------------------~~~~~~--- 200 (381)
... ....... .+ |...... ...+..
T Consensus 170 ~~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (351)
T TIGR01392 170 AFNEVQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDTRFQVESYLRYQG 249 (351)
T ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCccchHHHHHHHHH
Confidence 000 0000000 00 0000000 000000
Q ss_pred -HHhh------------hhhhccccc--cchhhcCCCCCCcEEEEeeCCCCccChHHHHHHHHHcCCCceEE----EeCC
Q 016885 201 -RVIQ------------KKAKFDIMD--LNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNII----KFDG 261 (381)
Q Consensus 201 -~~~~------------~~~~~~~~~--~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~----~~~g 261 (381)
.... ....++... .+....+.++++|+|+|+|++|.++|++.++.+.+.+++....+ ++++
T Consensus 250 ~~~~~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~~~~v~~~~i~~~ 329 (351)
T TIGR01392 250 DKFVDRFDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAESRELAKALPAAGLRVTYVEIESP 329 (351)
T ss_pred HHHHhhcCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHHhhcCCceEEEEeCCC
Confidence 0000 000000000 12245677899999999999999999999999999997653222 4554
Q ss_pred -CCCCC--ChhhHHHHHHHHHH
Q 016885 262 -DHNSS--RPQFYYDSVSIFFY 280 (381)
Q Consensus 262 -gH~~~--~~~~~~~~i~~fl~ 280 (381)
||... .++++.+.|.+||+
T Consensus 330 ~GH~~~le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 330 YGHDAFLVETDQVEELIRGFLR 351 (351)
T ss_pred CCcchhhcCHHHHHHHHHHHhC
Confidence 99844 78899999999973
No 55
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.85 E-value=2.5e-20 Score=160.33 Aligned_cols=188 Identities=23% Similarity=0.312 Sum_probs=130.5
Q ss_pred HHHHHHHhccCCcEEEEeCCCCCCCCCCC-----CcCCCcchhhHHHHHHHHHHhcCCC--CcEEEEEEchhHHHHHHhh
Q 016885 82 ANEAAVILLPSNITLFTLDFSGSGLSDGD-----YVSLGWHEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYG 154 (381)
Q Consensus 82 ~~~~~~~l~~~G~~vi~~D~~G~G~S~~~-----~~~~~~~~~~d~~~~i~~l~~~~~~--~~i~l~G~S~GG~~a~~~a 154 (381)
|......|+++||.|+.+|+||.+..... ....+...++|+.++++++.++... ++|+++|+|+||++++.++
T Consensus 3 f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~ 82 (213)
T PF00326_consen 3 FNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAA 82 (213)
T ss_dssp -SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHH
T ss_pred eeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhh
Confidence 44667889999999999999998754321 2222334589999999999988644 8999999999999999999
Q ss_pred ccCCC-ccEEEeccCccCHHHHHHH---HHH--HhhhhCCcccHHHHHHHHHHHhhhhhhccccccchhhcCCC--CCCc
Q 016885 155 AEDPS-IAGMVLDSAFSDLFDLMLE---LVD--VYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPK--TFIP 226 (381)
Q Consensus 155 ~~~p~-v~~vi~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--i~~P 226 (381)
..+|+ +++++..+|..++...... +.. ......+..... ... ..++...+.+ +++|
T Consensus 83 ~~~~~~f~a~v~~~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---------------~~s~~~~~~~~~~~~P 146 (213)
T PF00326_consen 83 TQHPDRFKAAVAGAGVSDLFSYYGTTDIYTKAEYLEYGDPWDNPE-FYR---------------ELSPISPADNVQIKPP 146 (213)
T ss_dssp HHTCCGSSEEEEESE-SSTTCSBHHTCCHHHGHHHHHSSTTTSHH-HHH---------------HHHHGGGGGGCGGGSE
T ss_pred cccceeeeeeeccceecchhcccccccccccccccccCccchhhh-hhh---------------hhccccccccccCCCC
Confidence 98888 8999999988765432211 111 000001100000 000 1112233333 7899
Q ss_pred EEEEeeCCCCccChHHHHHHHHHc---CCCceEEEeCC-CCCCC---ChhhHHHHHHHHHHhhcCC
Q 016885 227 ALFGHASEDKFIRARHSDLIFNAY---AGDKNIIKFDG-DHNSS---RPQFYYDSVSIFFYNVLHP 285 (381)
Q Consensus 227 vlii~G~~D~~v~~~~~~~l~~~~---~~~~~~~~~~g-gH~~~---~~~~~~~~i~~fl~~~l~~ 285 (381)
+|++||++|..||++++..+++++ +.+.+++++++ ||.+. ...++.+.+.+||+++|+.
T Consensus 147 ~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~~~~~~~~f~~~~l~~ 212 (213)
T PF00326_consen 147 VLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRRDWYERILDFFDKYLKK 212 (213)
T ss_dssp EEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHHHHHHHHHHHHHHHTT-
T ss_pred EEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHHHHHHHHHHHHHHHcCC
Confidence 999999999999999999999888 34578899988 99765 3347888899999999864
No 56
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.84 E-value=1.3e-19 Score=176.96 Aligned_cols=129 Identities=21% Similarity=0.304 Sum_probs=107.1
Q ss_pred EcCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChh----cHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcch
Q 016885 43 RNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRA----DANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE 118 (381)
Q Consensus 43 ~~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~----~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~ 118 (381)
++.||.+|.+.+|.|. +.++.|+||++||++.... .....+..|+++||.|+++|+||+|.|.+.....+..+
T Consensus 2 ~~~DG~~L~~~~~~P~---~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~~~~~ 78 (550)
T TIGR00976 2 PMRDGTRLAIDVYRPA---GGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLLGSDE 78 (550)
T ss_pred cCCCCCEEEEEEEecC---CCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEecCccc
Confidence 4679999999999996 3457899999999997653 12234567889999999999999999998765544456
Q ss_pred hhHHHHHHHHHHhcCCC-CcEEEEEEchhHHHHHHhhccCCC-ccEEEeccCccCHHH
Q 016885 119 KDDLKVVVSYLRGNKQT-SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFD 174 (381)
Q Consensus 119 ~~d~~~~i~~l~~~~~~-~~i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~~~~ 174 (381)
.+|+.++++|+..+... .+|+++|+|+||.+++.+|..+|. +++++..++..+...
T Consensus 79 ~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d~~~ 136 (550)
T TIGR00976 79 AADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWDLYR 136 (550)
T ss_pred chHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccchhH
Confidence 89999999999887533 799999999999999999998876 999999888876554
No 57
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.84 E-value=1.1e-19 Score=167.78 Aligned_cols=228 Identities=14% Similarity=0.109 Sum_probs=133.4
Q ss_pred EEcCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChh------------cHHHHHH---HhccCCcEEEEeCCCCCCC
Q 016885 42 IRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRA------------DANEAAV---ILLPSNITLFTLDFSGSGL 106 (381)
Q Consensus 42 ~~~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~------------~~~~~~~---~l~~~G~~vi~~D~~G~G~ 106 (381)
+...+|..+.+..+ +.+..| +|++||+.++.. .|..++. .|...+|+|+++|+||||.
T Consensus 40 ~~~~~~~~l~y~~~------G~~~~p-~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~ 112 (343)
T PRK08775 40 HAGLEDLRLRYELI------GPAGAP-VVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADG 112 (343)
T ss_pred CCCCCCceEEEEEe------ccCCCC-EEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCC
Confidence 33446777776654 222335 555555544443 4666665 4644579999999999998
Q ss_pred CCCCCcCCCcc-hhhHHHHHHHHHHhcCCCCc-EEEEEEchhHHHHHHhhccCCC-ccEEEeccCccCHHH---HHHHHH
Q 016885 107 SDGDYVSLGWH-EKDDLKVVVSYLRGNKQTSR-IGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFD---LMLELV 180 (381)
Q Consensus 107 S~~~~~~~~~~-~~~d~~~~i~~l~~~~~~~~-i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~~~~---~~~~~~ 180 (381)
|... ..... .++|+.++++ ..+.++ ++++||||||++++.+|.++|+ |+++|++++...... ......
T Consensus 113 s~~~--~~~~~~~a~dl~~ll~----~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~~~~~~~~~~~ 186 (343)
T PRK08775 113 SLDV--PIDTADQADAIALLLD----ALGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAHPYAAAWRALQ 186 (343)
T ss_pred CCCC--CCCHHHHHHHHHHHHH----HcCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCCHHHHHHHHHH
Confidence 7532 11111 1334433333 336656 5799999999999999999998 999999987543211 011000
Q ss_pred HHhhhhC-----C--------------cccHH-------------------HHHHHHHHHh-hhhhhc------ccc-cc
Q 016885 181 DVYKIRL-----P--------------KFTVK-------------------MAVQYMRRVI-QKKAKF------DIM-DL 214 (381)
Q Consensus 181 ~~~~~~~-----~--------------~~~~~-------------------~~~~~~~~~~-~~~~~~------~~~-~~ 214 (381)
....... . ..... ....++.... ...... ... ..
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 266 (343)
T PRK08775 187 RRAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVARTPVNAYLRLSESI 266 (343)
T ss_pred HHHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhcChhHHHHHHHHH
Confidence 0000000 0 00000 0000000000 000000 000 00
Q ss_pred ch-hhcCCCCCCcEEEEeeCCCCccChHHHHHHHHHcCCCceEEEeC--CCCCCC--ChhhHHHHHHHHHHhh
Q 016885 215 NC-LKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFD--GDHNSS--RPQFYYDSVSIFFYNV 282 (381)
Q Consensus 215 ~~-~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~--ggH~~~--~~~~~~~~i~~fl~~~ 282 (381)
.. ...+.++++|+|+++|++|.++|++.+..+.+.+.+..++++++ +||... .|+++.+.+.+||.+.
T Consensus 267 ~~~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a~l~~i~~~aGH~~~lE~Pe~~~~~l~~FL~~~ 339 (343)
T PRK08775 267 DLHRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGPRGSLRVLRSPYGHDAFLKETDRIDAILTTALRST 339 (343)
T ss_pred hhcCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCCCeEEEEeCCccHHHHhcCHHHHHHHHHHHHHhc
Confidence 00 12356889999999999999999999999999885445777785 499844 8999999999999754
No 58
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.84 E-value=1.4e-19 Score=146.11 Aligned_cols=228 Identities=22% Similarity=0.278 Sum_probs=159.3
Q ss_pred eeeEEEEEEcCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhc--HHHHHHHhccCCcEEEEeCCCCCCCCCCCCc
Q 016885 35 YKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD--ANEAAVILLPSNITLFTLDFSGSGLSDGDYV 112 (381)
Q Consensus 35 ~~~~~v~~~~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~--~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~ 112 (381)
.+.+.+.+++..+.++.+.+. ..+...+||++||+-+++.. +..+|..|.+.||.++.+|++|.|+|++.+.
T Consensus 8 ~~~~~ivi~n~~ne~lvg~lh------~tgs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~ 81 (269)
T KOG4667|consen 8 QIAQKIVIPNSRNEKLVGLLH------ETGSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFY 81 (269)
T ss_pred eeeeEEEeccCCCchhhccee------ccCCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccc
Confidence 455677788888888887554 34678899999999987754 5677889999999999999999999998765
Q ss_pred CCCc-chhhHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhhccCCCccEEEeccCccCHHHHHHHHH-----HH---h
Q 016885 113 SLGW-HEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELV-----DV---Y 183 (381)
Q Consensus 113 ~~~~-~~~~d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~v~~vi~~~~~~~~~~~~~~~~-----~~---~ 183 (381)
.-.+ .+++|+..+++++.... ..--+++|||-||.+++.++.+++++.-+|.+++-.+......+.. .+ .
T Consensus 82 ~Gn~~~eadDL~sV~q~~s~~n-r~v~vi~gHSkGg~Vvl~ya~K~~d~~~viNcsGRydl~~~I~eRlg~~~l~~ike~ 160 (269)
T KOG4667|consen 82 YGNYNTEADDLHSVIQYFSNSN-RVVPVILGHSKGGDVVLLYASKYHDIRNVINCSGRYDLKNGINERLGEDYLERIKEQ 160 (269)
T ss_pred cCcccchHHHHHHHHHHhccCc-eEEEEEEeecCccHHHHHHHHhhcCchheEEcccccchhcchhhhhcccHHHHHHhC
Confidence 5433 34899999999997642 1223689999999999999999999999999888877655442110 00 0
Q ss_pred h-hhCCc----ccHHHHHHHHHHHhhhhhhccccccchhhcCCC--CCCcEEEEeeCCCCccChHHHHHHHHHcCCCceE
Q 016885 184 K-IRLPK----FTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPK--TFIPALFGHASEDKFIRARHSDLIFNAYAGDKNI 256 (381)
Q Consensus 184 ~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~ 256 (381)
+ +..+. +...+....+... ...+..+...+ .+||||-+||..|.+||.+.+.++++.+++ ..+
T Consensus 161 Gfid~~~rkG~y~~rvt~eSlmdr---------Lntd~h~aclkId~~C~VLTvhGs~D~IVPve~AkefAk~i~n-H~L 230 (269)
T KOG4667|consen 161 GFIDVGPRKGKYGYRVTEESLMDR---------LNTDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKIIPN-HKL 230 (269)
T ss_pred CceecCcccCCcCceecHHHHHHH---------HhchhhhhhcCcCccCceEEEeccCCceeechhHHHHHHhccC-Cce
Confidence 0 01111 1111110000000 01122233333 469999999999999999999999999988 688
Q ss_pred EEeCC-CCCCCCh-hhHHHHHHHHH
Q 016885 257 IKFDG-DHNSSRP-QFYYDSVSIFF 279 (381)
Q Consensus 257 ~~~~g-gH~~~~~-~~~~~~i~~fl 279 (381)
.+++| +|.+..- .+.......|.
T Consensus 231 ~iIEgADHnyt~~q~~l~~lgl~f~ 255 (269)
T KOG4667|consen 231 EIIEGADHNYTGHQSQLVSLGLEFI 255 (269)
T ss_pred EEecCCCcCccchhhhHhhhcceeE
Confidence 88888 9998733 33333333443
No 59
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.83 E-value=1.5e-19 Score=167.12 Aligned_cols=229 Identities=16% Similarity=0.156 Sum_probs=147.7
Q ss_pred CCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhc-----HHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcch-
Q 016885 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD-----ANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE- 118 (381)
Q Consensus 45 ~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~-----~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~- 118 (381)
.++..|. .|.|.. +....+.||++||...+... +..+++.|+++||.|+++|++|+|.+.... +..+
T Consensus 45 ~~~~~l~--~~~~~~--~~~~~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~~---~~~d~ 117 (350)
T TIGR01836 45 EDKVVLY--RYTPVK--DNTHKTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRYL---TLDDY 117 (350)
T ss_pred cCcEEEE--EecCCC--CcCCCCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhcC---CHHHH
Confidence 4444454 566642 12334569999997644333 257899999999999999999999875432 2222
Q ss_pred -hhHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhhccCCC-ccEEEeccCccCHHHH---HHH---------HHHH--
Q 016885 119 -KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDL---MLE---------LVDV-- 182 (381)
Q Consensus 119 -~~d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~~~~~---~~~---------~~~~-- 182 (381)
.+++.++++++++..+.++++++||||||.+++.+++.+|+ ++++|++++..+.... ... ....
T Consensus 118 ~~~~~~~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (350)
T TIGR01836 118 INGYIDKCVDYICRTSKLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFETPGNMLSNWARHVDIDLAVDTMG 197 (350)
T ss_pred HHHHHHHHHHHHHHHhCCCcccEEEECHHHHHHHHHHHhCchheeeEEEeccccccCCCCchhhhhccccCHHHHHHhcC
Confidence 24588899999988888999999999999999999999887 9999998886653210 000 0000
Q ss_pred ----------hhhhCCc-----------------------------------ccHHHHHHHHHHHhhhhhhcccccc---
Q 016885 183 ----------YKIRLPK-----------------------------------FTVKMAVQYMRRVIQKKAKFDIMDL--- 214 (381)
Q Consensus 183 ----------~~~~~~~-----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~--- 214 (381)
+....|. .......+++........ +.....
T Consensus 198 ~~p~~~~~~~f~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~~~n~-l~~g~~~~~ 276 (350)
T TIGR01836 198 NIPGELLNLTFLMLKPFSLGYQKYVNLVDILEDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFYQQNG-LINGEVEIG 276 (350)
T ss_pred CCCHHHHHHHHHhcCcchhhhHHHHHHHHhcCChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHHhcCc-ccCCeeEEC
Confidence 0000010 000000000000000000 000000
Q ss_pred chhhcCCCCCCcEEEEeeCCCCccChHHHHHHHHHcCC-CceEEEeCCCCCCC-----ChhhHHHHHHHHHHh
Q 016885 215 NCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAG-DKNIIKFDGDHNSS-----RPQFYYDSVSIFFYN 281 (381)
Q Consensus 215 ~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~-~~~~~~~~ggH~~~-----~~~~~~~~i~~fl~~ 281 (381)
.....+.++++|+++++|++|.++|++.+..+++.++. .++++++++||+.. .++++++.+.+||.+
T Consensus 277 ~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 277 GRKVDLKNIKMPILNIYAERDHLVPPDASKALNDLVSSEDYTELSFPGGHIGIYVSGKAQKEVPPAIGKWLQA 349 (350)
T ss_pred CEEccHHhCCCCeEEEecCCCCcCCHHHHHHHHHHcCCCCeEEEEcCCCCEEEEECchhHhhhhHHHHHHHHh
Confidence 01123557899999999999999999999999999864 46778889999843 357889999999965
No 60
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.83 E-value=3.4e-19 Score=153.76 Aligned_cols=190 Identities=23% Similarity=0.267 Sum_probs=132.9
Q ss_pred EEEEEeecCCCCCCCCCcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCC-CCCCCcCC----------Cc-c
Q 016885 50 LQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGL-SDGDYVSL----------GW-H 117 (381)
Q Consensus 50 l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~-S~~~~~~~----------~~-~ 117 (381)
+.+++..|.+ .++.|.||++|+..|-......+++.|+++||.|+++|+-+... ........ .. .
T Consensus 1 ~~ay~~~P~~---~~~~~~Vvv~~d~~G~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (218)
T PF01738_consen 1 IDAYVARPEG---GGPRPAVVVIHDIFGLNPNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQ 77 (218)
T ss_dssp EEEEEEEETT---SSSEEEEEEE-BTTBS-HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHH
T ss_pred CeEEEEeCCC---CCCCCEEEEEcCCCCCchHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHH
Confidence 4577888863 36899999999999988888889999999999999999865433 11111000 00 1
Q ss_pred hhhHHHHHHHHHHhcCCC--CcEEEEEEchhHHHHHHhhccCCCccEEEeccCccCHHHHHHHHHHHhhhhCCcccHHHH
Q 016885 118 EKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMA 195 (381)
Q Consensus 118 ~~~d~~~~i~~l~~~~~~--~~i~l~G~S~GG~~a~~~a~~~p~v~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (381)
...++.+++++++++... ++|+++|+|+||.+++.++...+.+++++...|.....
T Consensus 78 ~~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~~~~~a~v~~yg~~~~~---------------------- 135 (218)
T PF01738_consen 78 VAADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARDPRVDAAVSFYGGSPPP---------------------- 135 (218)
T ss_dssp HHHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCTTTSSEEEEES-SSSGG----------------------
T ss_pred HHHHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhccccceEEEEcCCCCCC----------------------
Confidence 146778889999998733 89999999999999999999987799999887711100
Q ss_pred HHHHHHHhhhhhhccccccchhhcCCCCCCcEEEEeeCCCCccChHHHHHHHHHc---CCCceEEEeCC-CCCCCC----
Q 016885 196 VQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAY---AGDKNIIKFDG-DHNSSR---- 267 (381)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~---~~~~~~~~~~g-gH~~~~---- 267 (381)
.......++++|+++++|++|+.++.+....+.+.+ +...++++|+| +|.+..
T Consensus 136 -------------------~~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~ 196 (218)
T PF01738_consen 136 -------------------PPLEDAPKIKAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANPSRP 196 (218)
T ss_dssp -------------------GHHHHGGG--S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTSTTST
T ss_pred -------------------cchhhhcccCCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccCCCCc
Confidence 011234467799999999999999999888888777 55678999998 898662
Q ss_pred ------hhhHHHHHHHHHHhhc
Q 016885 268 ------PQFYYDSVSIFFYNVL 283 (381)
Q Consensus 268 ------~~~~~~~i~~fl~~~l 283 (381)
.++.++.+.+||+++|
T Consensus 197 ~~~~~aa~~a~~~~~~ff~~~L 218 (218)
T PF01738_consen 197 PYDPAAAEDAWQRTLAFFKRHL 218 (218)
T ss_dssp T--HHHHHHHHHHHHHHHCC--
T ss_pred ccCHHHHHHHHHHHHHHHHhcC
Confidence 2467778889998765
No 61
>PLN02872 triacylglycerol lipase
Probab=99.83 E-value=5.7e-19 Score=163.56 Aligned_cols=258 Identities=18% Similarity=0.193 Sum_probs=160.4
Q ss_pred cccccccccCcceeeEEEEEEcCCCeEEEEEEeecCCC-CCCCCCcEEEEeCCCCCChhcH------HHHHHHhccCCcE
Q 016885 23 LWERDFMLAGRSYKRQDLEIRNARGHVLQCSHYMPSPF-PEDTPLPCVVYCHGNSGCRADA------NEAAVILLPSNIT 95 (381)
Q Consensus 23 ~~~~~~~~~~~~~~~~~v~~~~~dg~~l~~~~~~P~~~-~~~~~~p~vv~~HG~~~~~~~~------~~~~~~l~~~G~~ 95 (381)
++.+-++..|.+.+ +..+++.||..|....+.+... ....++|+|+++||++++...| ..++..|+++||.
T Consensus 32 ~~~~~i~~~gy~~e--~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~Gyd 109 (395)
T PLN02872 32 LCAQLIHPAGYSCT--EHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFD 109 (395)
T ss_pred hHHHHHHHcCCCce--EEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCC
Confidence 33444445555554 6677889999998765432211 1123468999999998877765 3466678999999
Q ss_pred EEEeCCCCCCCCCCC---------CcCCCcch--hhHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhhccCCC----c
Q 016885 96 LFTLDFSGSGLSDGD---------YVSLGWHE--KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS----I 160 (381)
Q Consensus 96 vi~~D~~G~G~S~~~---------~~~~~~~~--~~d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~----v 160 (381)
|+++|.||++.+.+. +....|.+ ..|+.++++++.+... ++++++||||||.+++.++ .+|+ |
T Consensus 110 V~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~-~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v 187 (395)
T PLN02872 110 VWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITN-SKIFIVGHSQGTIMSLAAL-TQPNVVEMV 187 (395)
T ss_pred cccccccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccC-CceEEEEECHHHHHHHHHh-hChHHHHHH
Confidence 999999998765331 11234444 3699999999986543 7999999999999998555 5664 7
Q ss_pred cEEEeccCccCHHH----HH---H-----HHHHHhhh--hCCccc-HHH-------------------------------
Q 016885 161 AGMVLDSAFSDLFD----LM---L-----ELVDVYKI--RLPKFT-VKM------------------------------- 194 (381)
Q Consensus 161 ~~vi~~~~~~~~~~----~~---~-----~~~~~~~~--~~~~~~-~~~------------------------------- 194 (381)
+++++++|...+.. .. . ......+. ..|.-. ...
T Consensus 188 ~~~~~l~P~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~~~~n~~~~ 267 (395)
T PLN02872 188 EAAALLCPISYLDHVTAPLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSITGTNCCFNASRI 267 (395)
T ss_pred HHHHHhcchhhhccCCCHHHHHHHHHhHHHHHHHhcCceecCCcHHHHHHHHHHccCchhHHHHHHHHhCCCcccchhhh
Confidence 77777777642210 00 0 00000000 001000 000
Q ss_pred ---------------HHHHHHHHhh-hhhhcccccc---------c-hhhcCCCC--CCcEEEEeeCCCCccChHHHHHH
Q 016885 195 ---------------AVQYMRRVIQ-KKAKFDIMDL---------N-CLKLAPKT--FIPALFGHASEDKFIRARHSDLI 246 (381)
Q Consensus 195 ---------------~~~~~~~~~~-~~~~~~~~~~---------~-~~~~~~~i--~~Pvlii~G~~D~~v~~~~~~~l 246 (381)
..-+..-... ....|+.... . +.-.+.++ ++|+++++|++|.+++++.+..+
T Consensus 268 ~~~~~~~pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l 347 (395)
T PLN02872 268 DYYLEYEPHPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEHT 347 (395)
T ss_pred hHHHhcCCCcchHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHHH
Confidence 0000000000 0001111100 0 11134556 57999999999999999999999
Q ss_pred HHHcCCCceEEEeCC-CCC--C---CChhhHHHHHHHHHHhhcC
Q 016885 247 FNAYAGDKNIIKFDG-DHN--S---SRPQFYYDSVSIFFYNVLH 284 (381)
Q Consensus 247 ~~~~~~~~~~~~~~g-gH~--~---~~~~~~~~~i~~fl~~~l~ 284 (381)
.+.++...+++.+++ +|. . ..++++.+.|++|+++...
T Consensus 348 ~~~Lp~~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~~~ 391 (395)
T PLN02872 348 LAELPSKPELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSLGK 391 (395)
T ss_pred HHHCCCccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHhhh
Confidence 999987557777887 996 2 3578899999999986544
No 62
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.83 E-value=8.4e-19 Score=163.63 Aligned_cols=235 Identities=14% Similarity=0.115 Sum_probs=141.0
Q ss_pred CCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhc-------------HHHHH---HHhccCCcEEEEeCCCCC-CCCC
Q 016885 46 RGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD-------------ANEAA---VILLPSNITLFTLDFSGS-GLSD 108 (381)
Q Consensus 46 dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~-------------~~~~~---~~l~~~G~~vi~~D~~G~-G~S~ 108 (381)
+|.++.|..+-. +.....|+||++||++++... |..++ ..|...+|.|+++|++|+ |.|.
T Consensus 31 ~~~~~~y~~~G~---~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~ 107 (379)
T PRK00175 31 PPVELAYETYGT---LNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGST 107 (379)
T ss_pred CCceEEEEeccc---cCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCC
Confidence 344556555521 112336899999999998874 44443 244456899999999983 5443
Q ss_pred CCCc-------CC----CcchhhHHHHHHHHHHhcCCCCc-EEEEEEchhHHHHHHhhccCCC-ccEEEeccCccCHHHH
Q 016885 109 GDYV-------SL----GWHEKDDLKVVVSYLRGNKQTSR-IGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDL 175 (381)
Q Consensus 109 ~~~~-------~~----~~~~~~d~~~~i~~l~~~~~~~~-i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~~~~~ 175 (381)
+... .. .....+++.+.+..+.+..+.++ ++++||||||.+++.+|.++|+ |+++|++++.......
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~ 187 (379)
T PRK00175 108 GPSSINPDTGKPYGSDFPVITIRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARLSAQ 187 (379)
T ss_pred CCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcccCHH
Confidence 2110 00 01224555555555555557788 5899999999999999999998 9999998865432111
Q ss_pred ---H----HHHHHHhh------------------------------------hhCCc-c---------cH-HHHHHHHH-
Q 016885 176 ---M----LELVDVYK------------------------------------IRLPK-F---------TV-KMAVQYMR- 200 (381)
Q Consensus 176 ---~----~~~~~~~~------------------------------------~~~~~-~---------~~-~~~~~~~~- 200 (381)
+ ........ ..+.. . .. .....+..
T Consensus 188 ~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~ 267 (379)
T PRK00175 188 NIAFNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQVESYLRY 267 (379)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchHHHHHHH
Confidence 0 00000000 00000 0 00 00000000
Q ss_pred ---HHhh------------hhhhccccc---cchhhcCCCCCCcEEEEeeCCCCccChHHHHHHHHHcCCC---ceEEEe
Q 016885 201 ---RVIQ------------KKAKFDIMD---LNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGD---KNIIKF 259 (381)
Q Consensus 201 ---~~~~------------~~~~~~~~~---~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~---~~~~~~ 259 (381)
.... ....++... .+....+.+|++|+|+|+|++|.++|++.++.+.+.+++. .+++++
T Consensus 268 ~~~~~~~~~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~l~~i 347 (379)
T PRK00175 268 QGDKFVERFDANSYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPARSREIVDALLAAGADVSYAEI 347 (379)
T ss_pred HHHHHhhccCchHHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHHHHHHHHHHhcCCCeEEEEe
Confidence 0000 000000000 1234567889999999999999999999999999999664 255555
Q ss_pred C--CCCCCC--ChhhHHHHHHHHHHhhc
Q 016885 260 D--GDHNSS--RPQFYYDSVSIFFYNVL 283 (381)
Q Consensus 260 ~--ggH~~~--~~~~~~~~i~~fl~~~l 283 (381)
+ .||... .++++.+.|.+||.+.-
T Consensus 348 ~~~~GH~~~le~p~~~~~~L~~FL~~~~ 375 (379)
T PRK00175 348 DSPYGHDAFLLDDPRYGRLVRAFLERAA 375 (379)
T ss_pred CCCCCchhHhcCHHHHHHHHHHHHHhhh
Confidence 3 499844 78899999999998753
No 63
>PRK05855 short chain dehydrogenase; Validated
Probab=99.82 E-value=1.1e-18 Score=172.84 Aligned_cols=230 Identities=17% Similarity=0.156 Sum_probs=138.5
Q ss_pred EEcCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCC--cc-h
Q 016885 42 IRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLG--WH-E 118 (381)
Q Consensus 42 ~~~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~--~~-~ 118 (381)
+...+|..|.+..+- +...|+|||+||++++...|..++..| ..||.|+++|+||||.|........ .. .
T Consensus 7 ~~~~~g~~l~~~~~g------~~~~~~ivllHG~~~~~~~w~~~~~~L-~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~ 79 (582)
T PRK05855 7 VVSSDGVRLAVYEWG------DPDRPTVVLVHGYPDNHEVWDGVAPLL-ADRFRVVAYDVRGAGRSSAPKRTAAYTLARL 79 (582)
T ss_pred EEeeCCEEEEEEEcC------CCCCCeEEEEcCCCchHHHHHHHHHHh-hcceEEEEecCCCCCCCCCCCcccccCHHHH
Confidence 344688999877652 234689999999999999999999988 5589999999999999975432222 11 2
Q ss_pred hhHHHHHHHHHHhcCCC-CcEEEEEEchhHHHHHHhhccCC--C-ccEEEeccCccC-HH-HH----------------H
Q 016885 119 KDDLKVVVSYLRGNKQT-SRIGLWGRSMGAVTSLLYGAEDP--S-IAGMVLDSAFSD-LF-DL----------------M 176 (381)
Q Consensus 119 ~~d~~~~i~~l~~~~~~-~~i~l~G~S~GG~~a~~~a~~~p--~-v~~vi~~~~~~~-~~-~~----------------~ 176 (381)
++|+..+++.+ +. .+++|+||||||.+++.++.... . +..++..++... .. .. .
T Consensus 80 a~dl~~~i~~l----~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (582)
T PRK05855 80 ADDFAAVIDAV----SPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDHVGFWLRSGLRRPTPRRLARAL 155 (582)
T ss_pred HHHHHHHHHHh----CCCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchHHHHHHHhhcccccchhhhhHHH
Confidence 45555555554 33 45999999999999988876632 2 333333332211 00 00 0
Q ss_pred HHHHHHh---hhhCCcccHHHHH----HHHHHHhhhhhh------------------cc-----ccccchhhcCCCCCCc
Q 016885 177 LELVDVY---KIRLPKFTVKMAV----QYMRRVIQKKAK------------------FD-----IMDLNCLKLAPKTFIP 226 (381)
Q Consensus 177 ~~~~~~~---~~~~~~~~~~~~~----~~~~~~~~~~~~------------------~~-----~~~~~~~~~~~~i~~P 226 (381)
....... ....+........ ..+......... .. ............+++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 235 (582)
T PRK05855 156 GQLLRSWYIYLFHLPVLPELLWRLGLGRAWPRLLRRVEGTPVDPIPTQTTLSDGAHGVKLYRANMIRSLSRPRERYTDVP 235 (582)
T ss_pred HHHhhhHHHHHHhCCCCcHHHhccchhhHHHHhhhhccCCCcchhhhhhhhccccchHHHHHhhhhhhhccCccCCccCc
Confidence 0000000 0000000000000 000000000000 00 0000011123458899
Q ss_pred EEEEeeCCCCccChHHHHHHHHHcCCCceEEEeCCCCCCC--ChhhHHHHHHHHHHhhc
Q 016885 227 ALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDGDHNSS--RPQFYYDSVSIFFYNVL 283 (381)
Q Consensus 227 vlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~ggH~~~--~~~~~~~~i~~fl~~~l 283 (381)
+|+++|++|.+++.+....+.+.++. ..++++++||+.. .++++.+.+.+|+...-
T Consensus 236 ~lii~G~~D~~v~~~~~~~~~~~~~~-~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~ 293 (582)
T PRK05855 236 VQLIVPTGDPYVRPALYDDLSRWVPR-LWRREIKAGHWLPMSHPQVLAAAVAEFVDAVE 293 (582)
T ss_pred eEEEEeCCCcccCHHHhccccccCCc-ceEEEccCCCcchhhChhHHHHHHHHHHHhcc
Confidence 99999999999999988888777654 4677778899854 78899999999998743
No 64
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.82 E-value=3.9e-18 Score=153.34 Aligned_cols=268 Identities=16% Similarity=0.172 Sum_probs=163.4
Q ss_pred CCCCCcccccccccc---------ccCcceeeEEEEEEcCCCeEEEEEEeecCCCC---CCCCCcEEEEeCCCCCChhc-
Q 016885 15 AEYNPDQYLWERDFM---------LAGRSYKRQDLEIRNARGHVLQCSHYMPSPFP---EDTPLPCVVYCHGNSGCRAD- 81 (381)
Q Consensus 15 ~~~~~~~~~~~~~~~---------~~~~~~~~~~v~~~~~dg~~l~~~~~~P~~~~---~~~~~p~vv~~HG~~~~~~~- 81 (381)
..|.|..+.++..++ .....|+|+- ++..||..+...+..+.... +.+..|+||++||..+++..
T Consensus 64 ~~y~p~~w~~~ghlQT~~~~~~~~~p~~~y~Rei--i~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~ 141 (409)
T KOG1838|consen 64 EKYLPTLWLFSGHLQTLLLSFFGSKPPVEYTREI--IKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHES 141 (409)
T ss_pred cccccceeecCCeeeeeehhhcCCCCCCcceeEE--EEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhH
Confidence 456665555555544 3445566554 56679999999988665431 23577999999999876543
Q ss_pred -HHHHHHHhccCCcEEEEeCCCCCCCCCCC-CcCCCcchhhHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhhccCCC
Q 016885 82 -ANEAAVILLPSNITLFTLDFSGSGLSDGD-YVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS 159 (381)
Q Consensus 82 -~~~~~~~l~~~G~~vi~~D~~G~G~S~~~-~~~~~~~~~~d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~ 159 (381)
...++..+.++||+|++++.||+|.+.-. +..+.....+|+.+++++++++++..++..+|+||||.+...+.++..+
T Consensus 142 YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtTpr~f~ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~ 221 (409)
T KOG1838|consen 142 YVRHLVHEAQRKGYRVVVFNHRGLGGSKLTTPRLFTAGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGD 221 (409)
T ss_pred HHHHHHHHHHhCCcEEEEECCCCCCCCccCCCceeecCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccC
Confidence 35677788889999999999999888622 2222222369999999999999999999999999999999999987654
Q ss_pred ----ccEEEeccCccCH--HHHHHH-----HHHH-hhhhCCcc-------------------cHHHHHHHHHHHhhhhhh
Q 016885 160 ----IAGMVLDSAFSDL--FDLMLE-----LVDV-YKIRLPKF-------------------TVKMAVQYMRRVIQKKAK 208 (381)
Q Consensus 160 ----v~~vi~~~~~~~~--~~~~~~-----~~~~-~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~ 208 (381)
+.|+++.+|+..+ ...+.. .... ....+... ..+..+++-.........
T Consensus 222 ~~~l~~a~~v~~Pwd~~~~~~~~~~~~~~~~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~g 301 (409)
T KOG1838|consen 222 NTPLIAAVAVCNPWDLLAASRSIETPLYRRFYNRALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFG 301 (409)
T ss_pred CCCceeEEEEeccchhhhhhhHHhcccchHHHHHHHHHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcC
Confidence 4556655565432 111100 0000 00000000 000111111111111111
Q ss_pred cc-----ccccchhhcCCCCCCcEEEEeeCCCCccChHHHHHHHHHcCC-CceEEEe-CCCCCCC------ChhhHHHH-
Q 016885 209 FD-----IMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAG-DKNIIKF-DGDHNSS------RPQFYYDS- 274 (381)
Q Consensus 209 ~~-----~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~-~~~~~~~-~ggH~~~------~~~~~~~~- 274 (381)
+. +.+.+....+.+|++|+|+|++.+|+++|.+. ....+...+ ..-+++- .|||... ....+.+.
T Consensus 302 f~~~deYY~~aSs~~~v~~I~VP~L~ina~DDPv~p~~~-ip~~~~~~np~v~l~~T~~GGHlgfleg~~p~~~~w~~~~ 380 (409)
T KOG1838|consen 302 FKSVDEYYKKASSSNYVDKIKVPLLCINAADDPVVPEEA-IPIDDIKSNPNVLLVITSHGGHLGFLEGLWPSARTWMDKL 380 (409)
T ss_pred CCcHHHHHhhcchhhhcccccccEEEEecCCCCCCCccc-CCHHHHhcCCcEEEEEeCCCceeeeeccCCCccchhHHHH
Confidence 11 11235667888999999999999999999862 222222222 3333333 3699732 34456666
Q ss_pred HHHHHHhhcCC
Q 016885 275 VSIFFYNVLHP 285 (381)
Q Consensus 275 i~~fl~~~l~~ 285 (381)
+.+|+......
T Consensus 381 l~ef~~~~~~~ 391 (409)
T KOG1838|consen 381 LVEFLGNAIFQ 391 (409)
T ss_pred HHHHHHHHHhh
Confidence 77888765543
No 65
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.82 E-value=3.5e-19 Score=161.36 Aligned_cols=235 Identities=20% Similarity=0.301 Sum_probs=142.3
Q ss_pred ccCcceeeEEEEEEcCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhcHHHHH-HHhccCCcEEEEeCCCCCCCCC
Q 016885 30 LAGRSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAA-VILLPSNITLFTLDFSGSGLSD 108 (381)
Q Consensus 30 ~~~~~~~~~~v~~~~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~-~~l~~~G~~vi~~D~~G~G~S~ 108 (381)
+.+.+++ ++.|+- .|..|.++++.|. ++++.|+||++.|..+.+..+..+. +.|+.+|++++++|.||.|.|.
T Consensus 160 l~~~~i~--~v~iP~-eg~~I~g~LhlP~---~~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~ 233 (411)
T PF06500_consen 160 LSDYPIE--EVEIPF-EGKTIPGYLHLPS---GEKPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESP 233 (411)
T ss_dssp HSSSEEE--EEEEEE-TTCEEEEEEEESS---SSS-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGT
T ss_pred hCCCCcE--EEEEee-CCcEEEEEEEcCC---CCCCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccc
Confidence 4555555 444443 3489999999997 5688999999999999998876665 5688999999999999999987
Q ss_pred CCCcCCCcchhhHHHHHHHHHHhcCCC--CcEEEEEEchhHHHHHHhhccC-CCccEEEeccCccC-HHHHHHHHHHHhh
Q 016885 109 GDYVSLGWHEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAED-PSIAGMVLDSAFSD-LFDLMLELVDVYK 184 (381)
Q Consensus 109 ~~~~~~~~~~~~d~~~~i~~l~~~~~~--~~i~l~G~S~GG~~a~~~a~~~-p~v~~vi~~~~~~~-~~~~~~~~~~~~~ 184 (381)
..+...... .-..++++|+.+.+.+ .+|+++|.|+||+.|+++|... ++++++|..++.+. +..... ..
T Consensus 234 ~~~l~~D~~--~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft~~~-----~~ 306 (411)
T PF06500_consen 234 KWPLTQDSS--RLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFTDPE-----WQ 306 (411)
T ss_dssp TT-S-S-CC--HHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH-HH-----HH
T ss_pred cCCCCcCHH--HHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhhhccHH-----HH
Confidence 544333222 3467889999998765 6999999999999999999755 56999999988643 221111 11
Q ss_pred hhCCcccHHHHHHHHH-------HHhhhhhhccccccchhhcC--CCCCCcEEEEeeCCCCccChHHHHHHHHHcCCCce
Q 016885 185 IRLPKFTVKMAVQYMR-------RVIQKKAKFDIMDLNCLKLA--PKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKN 255 (381)
Q Consensus 185 ~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~--~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~ 255 (381)
...|......+...+. ........|.+.. ...+ ++..+|+|.+.|++|+++|.+..+.++..-... +
T Consensus 307 ~~~P~my~d~LA~rlG~~~~~~~~l~~el~~~SLk~---qGlL~~rr~~~plL~i~~~~D~v~P~eD~~lia~~s~~g-k 382 (411)
T PF06500_consen 307 QRVPDMYLDVLASRLGMAAVSDESLRGELNKFSLKT---QGLLSGRRCPTPLLAINGEDDPVSPIEDSRLIAESSTDG-K 382 (411)
T ss_dssp TTS-HHHHHHHHHHCT-SCE-HHHHHHHGGGGSTTT---TTTTTSS-BSS-EEEEEETT-SSS-HHHHHHHHHTBTT--E
T ss_pred hcCCHHHHHHHHHHhCCccCCHHHHHHHHHhcCcch---hccccCCCCCcceEEeecCCCCCCCHHHHHHHHhcCCCC-c
Confidence 1233221111111100 0001111222221 1223 677899999999999999999888877765444 4
Q ss_pred EEEeCC-C-CCCCChhhHHHHHHHHHHhhc
Q 016885 256 IIKFDG-D-HNSSRPQFYYDSVSIFFYNVL 283 (381)
Q Consensus 256 ~~~~~g-g-H~~~~~~~~~~~i~~fl~~~l 283 (381)
...++. . |.. -+.....+.+||++.|
T Consensus 383 ~~~~~~~~~~~g--y~~al~~~~~Wl~~~l 410 (411)
T PF06500_consen 383 ALRIPSKPLHMG--YPQALDEIYKWLEDKL 410 (411)
T ss_dssp EEEE-SSSHHHH--HHHHHHHHHHHHHHHH
T ss_pred eeecCCCccccc--hHHHHHHHHHHHHHhc
Confidence 555554 3 432 2467788899998875
No 66
>PRK10115 protease 2; Provisional
Probab=99.82 E-value=2e-18 Score=171.14 Aligned_cols=245 Identities=15% Similarity=0.128 Sum_probs=168.9
Q ss_pred cceeeEEEEEEcCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChh--cHHHHHHHhccCCcEEEEeCCCCCCCCCCC
Q 016885 33 RSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRA--DANEAAVILLPSNITLFTLDFSGSGLSDGD 110 (381)
Q Consensus 33 ~~~~~~~v~~~~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~--~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~ 110 (381)
..+..+.+++++.||.+|.+++.+++.....++.|+||++||+.+... .|......|+++||.|+.++.||.|.-...
T Consensus 412 ~~~~~e~v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~ 491 (686)
T PRK10115 412 ANYRSEHLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQ 491 (686)
T ss_pred cccEEEEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHH
Confidence 357788999999999999986655443223466799999999887653 366667789999999999999998765432
Q ss_pred CcCC-----CcchhhHHHHHHHHHHhcCCC--CcEEEEEEchhHHHHHHhhccCCC-ccEEEeccCccCHHHHHHHHHHH
Q 016885 111 YVSL-----GWHEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDV 182 (381)
Q Consensus 111 ~~~~-----~~~~~~d~~~~i~~l~~~~~~--~~i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~~~~~~~~~~~~ 182 (381)
+... .....+|+.+++++|.++.-. +++++.|.|.||+++..++.++|+ ++++|+..|+.++...+...
T Consensus 492 w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~~~~~~~~--- 568 (686)
T PRK10115 492 WYEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVTTMLDE--- 568 (686)
T ss_pred HHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhHhhhcccC---
Confidence 2211 224479999999999988533 899999999999999999999998 99999999998876543110
Q ss_pred hhhhCCcccHHHHHHHHHHHhhhhhhccc-cccchhhcCCCCCCc-EEEEeeCCCCccChHHHHHHHHHcC---CCceEE
Q 016885 183 YKIRLPKFTVKMAVQYMRRVIQKKAKFDI-MDLNCLKLAPKTFIP-ALFGHASEDKFIRARHSDLIFNAYA---GDKNII 257 (381)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~P-vlii~G~~D~~v~~~~~~~l~~~~~---~~~~~~ 257 (381)
.+|... .....+... .....+.. ...++...+.+++.| +|+++|.+|..||+.++.+++.++. .+..++
T Consensus 569 ---~~p~~~-~~~~e~G~p--~~~~~~~~l~~~SP~~~v~~~~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~~~~v 642 (686)
T PRK10115 569 ---SIPLTT-GEFEEWGNP--QDPQYYEYMKSYSPYDNVTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLL 642 (686)
T ss_pred ---CCCCCh-hHHHHhCCC--CCHHHHHHHHHcCchhccCccCCCceeEEecCCCCCcCchHHHHHHHHHHhcCCCCceE
Confidence 011110 011111000 00111111 234666778888899 6677999999999999999998883 344555
Q ss_pred Ee---C-CCCCCC-ChhhHH---HHHHHHHHhhcCCC
Q 016885 258 KF---D-GDHNSS-RPQFYY---DSVSIFFYNVLHPP 286 (381)
Q Consensus 258 ~~---~-ggH~~~-~~~~~~---~~i~~fl~~~l~~~ 286 (381)
++ + +||... ...... .....|+...+...
T Consensus 643 l~~~~~~~GHg~~~~r~~~~~~~A~~~aFl~~~~~~~ 679 (686)
T PRK10115 643 LLCTDMDSGHGGKSGRFKSYEGVAMEYAFLIALAQGT 679 (686)
T ss_pred EEEecCCCCCCCCcCHHHHHHHHHHHHHHHHHHhCCc
Confidence 55 4 499854 222222 33456887777654
No 67
>PLN02442 S-formylglutathione hydrolase
Probab=99.81 E-value=4.4e-18 Score=152.18 Aligned_cols=226 Identities=18% Similarity=0.204 Sum_probs=138.0
Q ss_pred EEcCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhcHHH---HHHHhccCCcEEEEeCCCCCCC-----CCC----
Q 016885 42 IRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANE---AAVILLPSNITLFTLDFSGSGL-----SDG---- 109 (381)
Q Consensus 42 ~~~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~---~~~~l~~~G~~vi~~D~~G~G~-----S~~---- 109 (381)
+...-|..+.+.+|+|... .+.+.|+|+++||++++...|.. +.+.+...|+.|+++|..++|. +..
T Consensus 24 ~s~~l~~~~~~~vy~P~~~-~~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~ 102 (283)
T PLN02442 24 FSSTLGCSMTFSVYFPPAS-DSGKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFG 102 (283)
T ss_pred eccccCCceEEEEEcCCcc-cCCCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccC
Confidence 4446788999999999732 34678999999999988776543 3456677799999999887662 110
Q ss_pred --C--C---cCCC---cc----hhhHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhhccCCC-ccEEEeccCccCHHH
Q 016885 110 --D--Y---VSLG---WH----EKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFD 174 (381)
Q Consensus 110 --~--~---~~~~---~~----~~~d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~~~~ 174 (381)
. + .... +. ..+++...++......+.++++|+||||||++++.++.++|+ ++++++.++..++..
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~ 182 (283)
T PLN02442 103 VGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIANPIN 182 (283)
T ss_pred CCcceeeccccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccCccc
Confidence 0 0 0000 01 123343344433333355889999999999999999999998 899999888865321
Q ss_pred HHHHHHHHhhhhCCcccHHHHHHHHHHHhhhhhhccccccchhhcCCCCCCcEEEEeeCCCCccChH-HHHHHHHHc---
Q 016885 175 LMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRAR-HSDLIFNAY--- 250 (381)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~-~~~~l~~~~--- 250 (381)
.... . .....++... ..........+....+...++|+++++|++|.+++.. .++.+++.+
T Consensus 183 ~~~~-~------------~~~~~~~g~~--~~~~~~~d~~~~~~~~~~~~~pvli~~G~~D~~v~~~~~s~~~~~~l~~~ 247 (283)
T PLN02442 183 CPWG-Q------------KAFTNYLGSD--KADWEEYDATELVSKFNDVSATILIDQGEADKFLKEQLLPENFEEACKEA 247 (283)
T ss_pred Cchh-h------------HHHHHHcCCC--hhhHHHcChhhhhhhccccCCCEEEEECCCCccccccccHHHHHHHHHHc
Confidence 0000 0 0000000000 0000001122233445567899999999999999863 345555444
Q ss_pred CCCceEEEeCC-CCCCCChhhHHHHHHHHHHhhc
Q 016885 251 AGDKNIIKFDG-DHNSSRPQFYYDSVSIFFYNVL 283 (381)
Q Consensus 251 ~~~~~~~~~~g-gH~~~~~~~~~~~i~~fl~~~l 283 (381)
+.+.++.++++ +|.......+.+..+.|..+.+
T Consensus 248 g~~~~~~~~pg~~H~~~~~~~~i~~~~~~~~~~~ 281 (283)
T PLN02442 248 GAPVTLRLQPGYDHSYFFIATFIDDHINHHAQAL 281 (283)
T ss_pred CCCeEEEEeCCCCccHHHHHHHHHHHHHHHHHHh
Confidence 55678889998 9986544444444444544443
No 68
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.81 E-value=5.5e-19 Score=141.19 Aligned_cols=227 Identities=17% Similarity=0.188 Sum_probs=150.7
Q ss_pred CCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCCh-hcHHHHHHHhccC-CcEEEEeCCCCCCCCCCCCcCCCcch-hhH
Q 016885 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCR-ADANEAAVILLPS-NITLFTLDFSGSGLSDGDYVSLGWHE-KDD 121 (381)
Q Consensus 45 ~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~-~~~~~~~~~l~~~-G~~vi~~D~~G~G~S~~~~~~~~~~~-~~d 121 (381)
.+|++|.+.-| +.....|+++.|.-|+. ..|......+-+. .+.|+++|.||+|.|......+..+. .+|
T Consensus 28 vng~ql~y~~~-------G~G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~D 100 (277)
T KOG2984|consen 28 VNGTQLGYCKY-------GHGPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMKD 100 (277)
T ss_pred ecCceeeeeec-------CCCCceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHHHHh
Confidence 36788887654 23345677777766554 4566666555443 49999999999999976655554332 578
Q ss_pred HHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhhccCCC-ccEEEeccCccCHHH---HH----HHHHHHhh-hhCC---c
Q 016885 122 LKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFD---LM----LELVDVYK-IRLP---K 189 (381)
Q Consensus 122 ~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~~~~---~~----~~~~~~~~-~~~~---~ 189 (381)
...+++.++.. ..+++.++|+|-||.+|+.+|+++++ |..+|.+++..-... .. +....+.. .+-| .
T Consensus 101 a~~avdLM~aL-k~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~kgiRdv~kWs~r~R~P~e~~ 179 (277)
T KOG2984|consen 101 AEYAVDLMEAL-KLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAFKGIRDVNKWSARGRQPYEDH 179 (277)
T ss_pred HHHHHHHHHHh-CCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHHhchHHHhhhhhhhcchHHHh
Confidence 88888877665 67999999999999999999999998 999888876553221 11 11111110 0111 1
Q ss_pred ccHHHHHHHHHHHhhhhhh---ccccccchhhcCCCCCCcEEEEeeCCCCccChHHHHHHHHHcCCCceEEEeC-CCCCC
Q 016885 190 FTVKMAVQYMRRVIQKKAK---FDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFD-GDHNS 265 (381)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~-ggH~~ 265 (381)
+........+..+...... +--.+. +...+++++||+||+||+.|++++..++--+....+.. ++.+++ |+|++
T Consensus 180 Yg~e~f~~~wa~wvD~v~qf~~~~dG~f-Cr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~~~a-~~~~~peGkHn~ 257 (277)
T KOG2984|consen 180 YGPETFRTQWAAWVDVVDQFHSFCDGRF-CRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLKSLA-KVEIHPEGKHNF 257 (277)
T ss_pred cCHHHHHHHHHHHHHHHHHHhhcCCCch-HhhhcccccCCeeEeeCCcCCCCCCCCccchhhhcccc-eEEEccCCCcce
Confidence 1112222222222221111 111122 44678899999999999999999988888887777665 555555 68986
Q ss_pred C--ChhhHHHHHHHHHHh
Q 016885 266 S--RPQFYYDSVSIFFYN 281 (381)
Q Consensus 266 ~--~~~~~~~~i~~fl~~ 281 (381)
. +++++...+.+||+.
T Consensus 258 hLrya~eFnklv~dFl~~ 275 (277)
T KOG2984|consen 258 HLRYAKEFNKLVLDFLKS 275 (277)
T ss_pred eeechHHHHHHHHHHHhc
Confidence 5 889999999999975
No 69
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.80 E-value=1.3e-18 Score=152.38 Aligned_cols=136 Identities=18% Similarity=0.267 Sum_probs=107.0
Q ss_pred EEEEcCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCCh----hcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCC
Q 016885 40 LEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCR----ADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLG 115 (381)
Q Consensus 40 v~~~~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~----~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~ 115 (381)
+.+.+..|. +.+.++.|. +.+++|+||++||+++.. ..|..+++.|+++||.|+++|+||||.|.+......
T Consensus 3 ~~l~~~~g~-~~~~~~~p~---~~~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~~~ 78 (266)
T TIGR03101 3 FFLDAPHGF-RFCLYHPPV---AVGPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAAAR 78 (266)
T ss_pred EEecCCCCc-EEEEEecCC---CCCCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccccCC
Confidence 445555554 556666664 234578999999998643 345667889999999999999999999987655444
Q ss_pred cch-hhHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhhccCCC-ccEEEeccCccCHHHHHHHHH
Q 016885 116 WHE-KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELV 180 (381)
Q Consensus 116 ~~~-~~d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~~~~~~~~~~ 180 (381)
+.. .+|+.++++++++. +..+++++||||||.+++.++.++|+ ++++|+++|..+....+..+.
T Consensus 79 ~~~~~~Dv~~ai~~L~~~-~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~g~~~l~~~l 144 (266)
T TIGR03101 79 WDVWKEDVAAAYRWLIEQ-GHPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVSGKQQLQQFL 144 (266)
T ss_pred HHHHHHHHHHHHHHHHhc-CCCCEEEEEECHHHHHHHHHHHhCccccceEEEeccccchHHHHHHHH
Confidence 433 68899999999876 56899999999999999999999887 999999999988776666543
No 70
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.80 E-value=2.8e-18 Score=136.68 Aligned_cols=193 Identities=20% Similarity=0.294 Sum_probs=145.6
Q ss_pred EEEEEEcCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCC---CCh--hcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCc
Q 016885 38 QDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNS---GCR--ADANEAAVILLPSNITLFTLDFSGSGLSDGDYV 112 (381)
Q Consensus 38 ~~v~~~~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~---~~~--~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~ 112 (381)
.++.+....|. +.+ .|.|. +....|+.|++|.-. |+. .....++..|.++||.++.+|+||-|.|.|.+.
T Consensus 5 ~~v~i~Gp~G~-le~-~~~~~---~~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD 79 (210)
T COG2945 5 PTVIINGPAGR-LEG-RYEPA---KTPAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFD 79 (210)
T ss_pred CcEEecCCccc-cee-ccCCC---CCCCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCccc
Confidence 35666666553 443 45554 356789999999754 333 234577889999999999999999999999875
Q ss_pred CCCcchhhHHHHHHHHHHhcCCCCcE-EEEEEchhHHHHHHhhccCCCccEEEeccCccCHHHHHHHHHHHhhhhCCccc
Q 016885 113 SLGWHEKDDLKVVVSYLRGNKQTSRI-GLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFT 191 (381)
Q Consensus 113 ~~~~~~~~d~~~~i~~l~~~~~~~~i-~l~G~S~GG~~a~~~a~~~p~v~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (381)
. +.-+.+|+.++++|++++.+..+. .+.|+|+|+++++.+|.+.|+....+...|..+.++.
T Consensus 80 ~-GiGE~~Da~aaldW~~~~hp~s~~~~l~GfSFGa~Ia~~la~r~~e~~~~is~~p~~~~~df---------------- 142 (210)
T COG2945 80 N-GIGELEDAAAALDWLQARHPDSASCWLAGFSFGAYIAMQLAMRRPEILVFISILPPINAYDF---------------- 142 (210)
T ss_pred C-CcchHHHHHHHHHHHHhhCCCchhhhhcccchHHHHHHHHHHhcccccceeeccCCCCchhh----------------
Confidence 4 456789999999999999877655 7899999999999999999988888877777652110
Q ss_pred HHHHHHHHHHHhhhhhhccccccchhhcCCCCCCcEEEEeeCCCCccChHHHHHHHHHcCCCceEEEeCC-CCCCC-Chh
Q 016885 192 VKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS-RPQ 269 (381)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~g-gH~~~-~~~ 269 (381)
..+.-..+|.++|+|+.|.+++.....+.++.. ..+++++++ +|++. ...
T Consensus 143 --------------------------s~l~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~~--~~~~i~i~~a~HFF~gKl~ 194 (210)
T COG2945 143 --------------------------SFLAPCPSPGLVIQGDADDVVDLVAVLKWQESI--KITVITIPGADHFFHGKLI 194 (210)
T ss_pred --------------------------hhccCCCCCceeEecChhhhhcHHHHHHhhcCC--CCceEEecCCCceecccHH
Confidence 122234579999999999999988777777662 234555555 99987 566
Q ss_pred hHHHHHHHHHH
Q 016885 270 FYYDSVSIFFY 280 (381)
Q Consensus 270 ~~~~~i~~fl~ 280 (381)
.+.+.+.+|+.
T Consensus 195 ~l~~~i~~~l~ 205 (210)
T COG2945 195 ELRDTIADFLE 205 (210)
T ss_pred HHHHHHHHHhh
Confidence 78888888884
No 71
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.80 E-value=8.2e-18 Score=145.35 Aligned_cols=200 Identities=23% Similarity=0.244 Sum_probs=155.1
Q ss_pred EEEEEcCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCC-CCCCCCC------
Q 016885 39 DLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGS-GLSDGDY------ 111 (381)
Q Consensus 39 ~v~~~~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~-G~S~~~~------ 111 (381)
.+++...+ ..+.+++..|.+ .++.|.||++|+..|-.......++.|+++||.|+++|+-+. |.+....
T Consensus 4 ~v~~~~~~-~~~~~~~a~P~~---~~~~P~VIv~hei~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~ 79 (236)
T COG0412 4 DVTIPAPD-GELPAYLARPAG---AGGFPGVIVLHEIFGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAEL 79 (236)
T ss_pred ceEeeCCC-ceEeEEEecCCc---CCCCCEEEEEecccCCchHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHH
Confidence 55677666 899999999973 445599999999999999999999999999999999998774 3222111
Q ss_pred c-----CCCc-chhhHHHHHHHHHHhcCCC--CcEEEEEEchhHHHHHHhhccCCCccEEEeccCccCHHHHHHHHHHHh
Q 016885 112 V-----SLGW-HEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVY 183 (381)
Q Consensus 112 ~-----~~~~-~~~~d~~~~i~~l~~~~~~--~~i~l~G~S~GG~~a~~~a~~~p~v~~vi~~~~~~~~~~~~~~~~~~~ 183 (381)
. ...+ ....|+.++++||..+... ++|+++|+||||.+++.++...|++++.+...|.....
T Consensus 80 ~~~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~~v~a~v~fyg~~~~~---------- 149 (236)
T COG0412 80 ETGLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAPEVKAAVAFYGGLIAD---------- 149 (236)
T ss_pred hhhhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccCCccEEEEecCCCCCC----------
Confidence 0 0111 2378999999999988733 78999999999999999999998999999877653210
Q ss_pred hhhCCcccHHHHHHHHHHHhhhhhhccccccchhhcCCCCCCcEEEEeeCCCCccChHHHHHHHHHcCC---CceEEEeC
Q 016885 184 KIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAG---DKNIIKFD 260 (381)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~---~~~~~~~~ 260 (381)
......++++|+|+.+|+.|..+|......+.+.+.. ...+.+++
T Consensus 150 --------------------------------~~~~~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ 197 (236)
T COG0412 150 --------------------------------DTADAPKIKVPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYP 197 (236)
T ss_pred --------------------------------cccccccccCcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeC
Confidence 0022457889999999999999999988888888743 46788888
Q ss_pred C-CCCCCCh-------------hhHHHHHHHHHHhhcC
Q 016885 261 G-DHNSSRP-------------QFYYDSVSIFFYNVLH 284 (381)
Q Consensus 261 g-gH~~~~~-------------~~~~~~i~~fl~~~l~ 284 (381)
+ .|.+..+ +..++++.+||++.+.
T Consensus 198 ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~~ 235 (236)
T COG0412 198 GAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLLG 235 (236)
T ss_pred CCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhcc
Confidence 8 5876532 3677888899988764
No 72
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.80 E-value=1.6e-17 Score=148.33 Aligned_cols=221 Identities=15% Similarity=0.213 Sum_probs=138.3
Q ss_pred cCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhcHHHH--HHHh-ccCCcEEEEeCC--CCCCCCCCC--------
Q 016885 44 NARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEA--AVIL-LPSNITLFTLDF--SGSGLSDGD-------- 110 (381)
Q Consensus 44 ~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~--~~~l-~~~G~~vi~~D~--~G~G~S~~~-------- 110 (381)
..-+..+.+.+|+|++.. .++.|+|+++||++++...|... +..+ .+.|+.|+++|. +|+|.+...
T Consensus 21 ~~~~~~~~~~v~~P~~~~-~~~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~ 99 (275)
T TIGR02821 21 ETCGVPMTFGVFLPPQAA-AGPVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKG 99 (275)
T ss_pred cccCCceEEEEEcCCCcc-CCCCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCC
Confidence 346778889999997532 34679999999999888777532 3344 456999999998 555533210
Q ss_pred ---CcCC-------CcchhhHH-HHHHHHHHhcC--CCCcEEEEEEchhHHHHHHhhccCCC-ccEEEeccCccCHHHHH
Q 016885 111 ---YVSL-------GWHEKDDL-KVVVSYLRGNK--QTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLM 176 (381)
Q Consensus 111 ---~~~~-------~~~~~~d~-~~~i~~l~~~~--~~~~i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~~~~~~ 176 (381)
+.+. .+.....+ .++...+.+.. +.++++++||||||++++.++.++|+ ++++++++|..+....
T Consensus 100 ~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~~- 178 (275)
T TIGR02821 100 AGFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIVAPSRC- 178 (275)
T ss_pred ccccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCccCcccC-
Confidence 0000 01111222 23333344432 34789999999999999999999998 8999998888653210
Q ss_pred HHHHHHhhhhCCcccHHHHHHHHHHHhhhhhhccccccchhhcCC--CCCCcEEEEeeCCCCccCh-HHHHHHHHHc---
Q 016885 177 LELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAP--KTFIPALFGHASEDKFIRA-RHSDLIFNAY--- 250 (381)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~i~~Pvlii~G~~D~~v~~-~~~~~l~~~~--- 250 (381)
.........++.. ... .....++..... ....|+++++|+.|+.++. .++..+.+.+
T Consensus 179 ------------~~~~~~~~~~l~~----~~~-~~~~~~~~~~~~~~~~~~plli~~G~~D~~v~~~~~~~~~~~~l~~~ 241 (275)
T TIGR02821 179 ------------PWGQKAFSAYLGA----DEA-AWRSYDASLLVADGGRHSTILIDQGTADQFLDEQLRPDAFEQACRAA 241 (275)
T ss_pred ------------cchHHHHHHHhcc----ccc-chhhcchHHHHhhcccCCCeeEeecCCCcccCccccHHHHHHHHHHc
Confidence 0000000111100 000 000011111111 2457999999999999998 4555555555
Q ss_pred CCCceEEEeCC-CCCCCChhhHHHHHHHHHHhhc
Q 016885 251 AGDKNIIKFDG-DHNSSRPQFYYDSVSIFFYNVL 283 (381)
Q Consensus 251 ~~~~~~~~~~g-gH~~~~~~~~~~~i~~fl~~~l 283 (381)
+...++.+++| +|.+.....+....++|+.+++
T Consensus 242 g~~v~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~ 275 (275)
T TIGR02821 242 GQALTLRRQAGYDHSYYFIASFIADHLRHHAERL 275 (275)
T ss_pred CCCeEEEEeCCCCccchhHHHhHHHHHHHHHhhC
Confidence 44568888898 9999888888888888887653
No 73
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.80 E-value=6.9e-18 Score=181.35 Aligned_cols=217 Identities=14% Similarity=0.112 Sum_probs=138.4
Q ss_pred CCcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcC-----CCcchhhHHHHHHHHHHhcCCCCcEE
Q 016885 65 PLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVS-----LGWHEKDDLKVVVSYLRGNKQTSRIG 139 (381)
Q Consensus 65 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~-----~~~~~~~d~~~~i~~l~~~~~~~~i~ 139 (381)
..|+|||+||++++...|..++..|.+ +|+|+++|+||||.|...... ......+++.+.+..+.+..+.++++
T Consensus 1370 ~~~~vVllHG~~~s~~~w~~~~~~L~~-~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l~~~~v~ 1448 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGEDWIPIMKAISG-SARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHITPGKVT 1448 (1655)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHhC-CCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 468999999999999999999998876 599999999999998743210 01112344444444444444678999
Q ss_pred EEEEchhHHHHHHhhccCCC-ccEEEeccCccCHHHHH-HHH--------HHH--------h-hhhCCcc------cHHH
Q 016885 140 LWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLM-LEL--------VDV--------Y-KIRLPKF------TVKM 194 (381)
Q Consensus 140 l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~~~~~~-~~~--------~~~--------~-~~~~~~~------~~~~ 194 (381)
|+||||||.+++.++.++|+ ++++|++++........ ... ... + ....... ....
T Consensus 1449 LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 1528 (1655)
T PLN02980 1449 LVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVARKIRSAKDDSRARMLIDHGLEIFLENWYSGELWKSLRNHPH 1528 (1655)
T ss_pred EEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHHHHHHhhhhhHHHHHHHhhhHHHHHHHhccHHHhhhhccCHH
Confidence 99999999999999999998 99999887643221100 000 000 0 0000000 0000
Q ss_pred HHHHHHHHhhh---------hhhcc-ccccchhhcCCCCCCcEEEEeeCCCCccChHHHHHHHHHcCCC-----------
Q 016885 195 AVQYMRRVIQK---------KAKFD-IMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGD----------- 253 (381)
Q Consensus 195 ~~~~~~~~~~~---------~~~~~-~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~----------- 253 (381)
........... ...+. ....+....+.++++|+|+++|++|..++ +.+.++.+.+++.
T Consensus 1529 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~~~~~~ 1607 (1655)
T PLN02980 1529 FNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLLLVVGEKDVKFK-QIAQKMYREIGKSKESGNDKGKEI 1607 (1655)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhhCCCCEEEEEECCCCccH-HHHHHHHHHccccccccccccccc
Confidence 00000000000 00000 01112335678899999999999999875 6677777777542
Q ss_pred ceEEEeCC-CCCCC--ChhhHHHHHHHHHHhhc
Q 016885 254 KNIIKFDG-DHNSS--RPQFYYDSVSIFFYNVL 283 (381)
Q Consensus 254 ~~~~~~~g-gH~~~--~~~~~~~~i~~fl~~~l 283 (381)
.+++++++ ||... .|+++.+.|.+||.+.-
T Consensus 1608 a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~~~~ 1640 (1655)
T PLN02980 1608 IEIVEIPNCGHAVHLENPLPVIRALRKFLTRLH 1640 (1655)
T ss_pred eEEEEECCCCCchHHHCHHHHHHHHHHHHHhcc
Confidence 36888887 99854 88999999999998643
No 74
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.80 E-value=6.6e-18 Score=150.54 Aligned_cols=216 Identities=17% Similarity=0.189 Sum_probs=137.2
Q ss_pred CCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhcHHHH----H------HHhccCCcEEEEeCCCCCCCCCCCCcCCC
Q 016885 46 RGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEA----A------VILLPSNITLFTLDFSGSGLSDGDYVSLG 115 (381)
Q Consensus 46 dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~----~------~~l~~~G~~vi~~D~~G~G~S~~~~~~~~ 115 (381)
||++|.+.+|+| +....++.|+||..|+++......... . ..|+++||.|+.+|.||+|.|.|.+....
T Consensus 1 DGv~L~adv~~P-~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~~ 79 (272)
T PF02129_consen 1 DGVRLAADVYRP-GADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPMS 79 (272)
T ss_dssp TS-EEEEEEEEE---TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TTS
T ss_pred CCCEEEEEEEec-CCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccCC
Confidence 799999999999 334678999999999999654222111 1 12899999999999999999999987766
Q ss_pred cchhhHHHHHHHHHHhcCCC-CcEEEEEEchhHHHHHHhhccCCC-ccEEEeccCccCHHH---------------HH--
Q 016885 116 WHEKDDLKVVVSYLRGNKQT-SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFD---------------LM-- 176 (381)
Q Consensus 116 ~~~~~d~~~~i~~l~~~~~~-~~i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~~~~---------------~~-- 176 (381)
..+.+|..++|+|+..+... .+|+++|.|++|.+++.+|+..|. +++++...+..++.. ..
T Consensus 80 ~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~~~~~~~~gG~~~~~~~~~w~~ 159 (272)
T PF02129_consen 80 PNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDLYRDSIYPGGAFRLGFFAGWED 159 (272)
T ss_dssp HHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBTCCTSSEETTEEBCCHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcccccchhcCCcccccchhHHHH
Confidence 67799999999999999543 799999999999999999995554 999999776654332 11
Q ss_pred -HHHHHHhhhhCCcccHHHHH----------HHHHH----------Hhhhh-hhccccccchhhcCCCCCCcEEEEeeCC
Q 016885 177 -LELVDVYKIRLPKFTVKMAV----------QYMRR----------VIQKK-AKFDIMDLNCLKLAPKTFIPALFGHASE 234 (381)
Q Consensus 177 -~~~~~~~~~~~~~~~~~~~~----------~~~~~----------~~~~~-~~~~~~~~~~~~~~~~i~~Pvlii~G~~ 234 (381)
........ ........... ..... ..... ....+...+....+.++++|+|++.|..
T Consensus 160 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~i~vP~l~v~Gw~ 238 (272)
T PF02129_consen 160 LQSQQEDPQ-SRPAPDRDYLRERARYEALGDSPLGRLPRDPPYWDEWLDHPPYDPFWQERSPSERLDKIDVPVLIVGGWY 238 (272)
T ss_dssp HHHHHHHHT-CCCCSSSHHHHHHHHHHCHHHHHHHHCHGGTHHHHHHHHT-SSSHHHHTTBHHHHHGG--SEEEEEEETT
T ss_pred HHHHhhccc-CCCchhhhhhhhhhhhhhhhhHHHhhhccccHHHHHHHhCCCcCHHHHhCChHHHHhhCCCCEEEecccC
Confidence 00111111 11111000000 00110 00000 0001112233345688999999999999
Q ss_pred CCccChHHHHHHHHHcCCCc----eEEEeCCCCC
Q 016885 235 DKFIRARHSDLIFNAYAGDK----NIIKFDGDHN 264 (381)
Q Consensus 235 D~~v~~~~~~~l~~~~~~~~----~~~~~~ggH~ 264 (381)
|..+. ..+.+.++++.... ++++-+++|.
T Consensus 239 D~~~~-~~~~~~~~~l~~~~~~~~~Liigpw~H~ 271 (272)
T PF02129_consen 239 DTLFL-RGALRAYEALRAPGSKPQRLIIGPWTHG 271 (272)
T ss_dssp CSSTS-HHHHHHHHHHCTTSTC-EEEEEESESTT
T ss_pred Ccccc-hHHHHHHHHhhcCCCCCCEEEEeCCCCC
Confidence 97666 77888888885543 7788788996
No 75
>PRK11460 putative hydrolase; Provisional
Probab=99.79 E-value=9e-18 Score=145.71 Aligned_cols=176 Identities=17% Similarity=0.156 Sum_probs=123.4
Q ss_pred CCCCcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCCC---CC--Cc--CCCc-ch-------hhHHHHHHH
Q 016885 63 DTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSD---GD--YV--SLGW-HE-------KDDLKVVVS 127 (381)
Q Consensus 63 ~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~---~~--~~--~~~~-~~-------~~d~~~~i~ 127 (381)
..+.|+||++||+|++...|..++..|.+.++.+..+..+|..... +. +. .... .. ...+.+.++
T Consensus 13 ~~~~~~vIlLHG~G~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~ 92 (232)
T PRK11460 13 KPAQQLLLLFHGVGDNPVAMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVR 92 (232)
T ss_pred CCCCcEEEEEeCCCCChHHHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHH
Confidence 4567999999999999999999999998776655566666643221 10 00 0000 00 223444556
Q ss_pred HHHhcCCC--CcEEEEEEchhHHHHHHhhccCCC-ccEEEeccCccCHHHHHHHHHHHhhhhCCcccHHHHHHHHHHHhh
Q 016885 128 YLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQ 204 (381)
Q Consensus 128 ~l~~~~~~--~~i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (381)
++.++.+. ++|+++|||+||.+++.++..+|+ +.+++..++.... .+
T Consensus 93 ~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~~--------------~~---------------- 142 (232)
T PRK11460 93 YWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYAS--------------LP---------------- 142 (232)
T ss_pred HHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEecccccc--------------cc----------------
Confidence 66555444 689999999999999999988888 5667766553210 00
Q ss_pred hhhhccccccchhhcCCCCCCcEEEEeeCCCCccChHHHHHHHHHcC---CCceEEEeCC-CCCCCChhhHHHHHHHHHH
Q 016885 205 KKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA---GDKNIIKFDG-DHNSSRPQFYYDSVSIFFY 280 (381)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~---~~~~~~~~~g-gH~~~~~~~~~~~i~~fl~ 280 (381)
.....++|++++||++|+++|.+.++++.+.+. ...+++++++ ||... .+..+.+.+||.
T Consensus 143 --------------~~~~~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~--~~~~~~~~~~l~ 206 (232)
T PRK11460 143 --------------ETAPTATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAID--PRLMQFALDRLR 206 (232)
T ss_pred --------------ccccCCCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCC--HHHHHHHHHHHH
Confidence 001235899999999999999999998888773 3457777786 99975 567788889998
Q ss_pred hhcC
Q 016885 281 NVLH 284 (381)
Q Consensus 281 ~~l~ 284 (381)
+.+.
T Consensus 207 ~~l~ 210 (232)
T PRK11460 207 YTVP 210 (232)
T ss_pred HHcc
Confidence 8874
No 76
>PLN00021 chlorophyllase
Probab=99.79 E-value=1.7e-17 Score=149.27 Aligned_cols=199 Identities=14% Similarity=0.100 Sum_probs=135.7
Q ss_pred ccccCcceeeEEEEEEcCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCC
Q 016885 28 FMLAGRSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLS 107 (381)
Q Consensus 28 ~~~~~~~~~~~~v~~~~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S 107 (381)
|..........++.+.+.....+.+.+|.|. ..+..|+||++||++++...|..+++.|+++||.|+++|++|++..
T Consensus 17 ~~~g~~~~~~~~~~~~~~~~~~~p~~v~~P~---~~g~~PvVv~lHG~~~~~~~y~~l~~~Las~G~~VvapD~~g~~~~ 93 (313)
T PLN00021 17 FETGKFPVELITVDESSRPSPPKPLLVATPS---EAGTYPVLLFLHGYLLYNSFYSQLLQHIASHGFIVVAPQLYTLAGP 93 (313)
T ss_pred cccCCceeEEEEecCCCcCCCCceEEEEeCC---CCCCCCEEEEECCCCCCcccHHHHHHHHHhCCCEEEEecCCCcCCC
Confidence 3333344454555554444467788899996 3567899999999999988899999999999999999999986432
Q ss_pred CCCCcCCCcchhhHHHHHHHHHHhc----------CCCCcEEEEEEchhHHHHHHhhccCC------CccEEEeccCccC
Q 016885 108 DGDYVSLGWHEKDDLKVVVSYLRGN----------KQTSRIGLWGRSMGAVTSLLYGAEDP------SIAGMVLDSAFSD 171 (381)
Q Consensus 108 ~~~~~~~~~~~~~d~~~~i~~l~~~----------~~~~~i~l~G~S~GG~~a~~~a~~~p------~v~~vi~~~~~~~ 171 (381)
.. ....++..++++|+.+. .+.++++++||||||.+++.+|..++ .++++|++.|...
T Consensus 94 ~~------~~~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g 167 (313)
T PLN00021 94 DG------TDEIKDAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDG 167 (313)
T ss_pred Cc------hhhHHHHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeeccccc
Confidence 11 12346677778887753 12378999999999999999998876 3788898888654
Q ss_pred HHHHHHHHHHHhhhhCCcccHHHHHHHHHHHhhhhhhccccccchhhcCCCCCCcEEEEeeCCCC-----c----cChH-
Q 016885 172 LFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDK-----F----IRAR- 241 (381)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~-----~----v~~~- 241 (381)
.... ....|.. . ........+.+|+|++++..|. . .|..
T Consensus 168 ~~~~--------~~~~p~i------------------l-----~~~~~s~~~~~P~liig~g~~~~~~~~~~p~~ap~~~ 216 (313)
T PLN00021 168 TSKG--------KQTPPPV------------------L-----TYAPHSFNLDIPVLVIGTGLGGEPRNPLFPPCAPDGV 216 (313)
T ss_pred cccc--------cCCCCcc------------------c-----ccCcccccCCCCeEEEecCCCcccccccccccCCCCC
Confidence 2110 0001100 0 0001222367999999999763 2 3344
Q ss_pred HHHHHHHHcCCCceEEEeCC-CCCCC
Q 016885 242 HSDLIFNAYAGDKNIIKFDG-DHNSS 266 (381)
Q Consensus 242 ~~~~l~~~~~~~~~~~~~~g-gH~~~ 266 (381)
+..++++.++..+.+.+.++ ||+..
T Consensus 217 ~~~~f~~~~~~~~~~~~~~~~gH~~~ 242 (313)
T PLN00021 217 NHAEFFNECKAPAVHFVAKDYGHMDM 242 (313)
T ss_pred CHHHHHHhcCCCeeeeeecCCCccee
Confidence 45788888877766766665 99843
No 77
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.77 E-value=1.3e-17 Score=143.11 Aligned_cols=180 Identities=15% Similarity=0.105 Sum_probs=116.4
Q ss_pred EEeecCCCCCCCCCcEEEEeCCCCCChhcHH---HHHHHhccCCcEEEEeCCCCCCCCCCCCc-------CCCcchhhHH
Q 016885 53 SHYMPSPFPEDTPLPCVVYCHGNSGCRADAN---EAAVILLPSNITLFTLDFSGSGLSDGDYV-------SLGWHEKDDL 122 (381)
Q Consensus 53 ~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~---~~~~~l~~~G~~vi~~D~~G~G~S~~~~~-------~~~~~~~~d~ 122 (381)
++|+|++. .++.|+||++||++++...+. .+...+.+.||.|+++|++|++.+...+. .....+..++
T Consensus 2 ~ly~P~~~--~~~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (212)
T TIGR01840 2 YVYVPAGL--TGPRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESL 79 (212)
T ss_pred EEEcCCCC--CCCCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHH
Confidence 57888752 467899999999998877654 34455556799999999999875432110 0111236788
Q ss_pred HHHHHHHHhcCCC--CcEEEEEEchhHHHHHHhhccCCC-ccEEEeccCccCHHH-HHHHHHHHhhhhCCcccHHHHHHH
Q 016885 123 KVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFD-LMLELVDVYKIRLPKFTVKMAVQY 198 (381)
Q Consensus 123 ~~~i~~l~~~~~~--~~i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 198 (381)
..+++++.+.... ++|+|+|||+||.+++.++..+|+ +.+++.+++...... ......... .+........+.
T Consensus 80 ~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 156 (212)
T TIGR01840 80 HQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPYGEASSSISATPQM---CTAATAASVCRL 156 (212)
T ss_pred HHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcccccccchhhHhhc---CCCCCHHHHHHH
Confidence 8999999887655 699999999999999999999998 888887776542111 000000000 000001111111
Q ss_pred HHHHhhhhhhccccccchhhcCCCCCCcEEEEeeCCCCccChHHHHHHHHHcC
Q 016885 199 MRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA 251 (381)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~ 251 (381)
.... .........|++++||.+|.+||++.++.+.+.+.
T Consensus 157 ~~~~--------------~~~~~~~~p~~~i~hG~~D~vVp~~~~~~~~~~l~ 195 (212)
T TIGR01840 157 VRGM--------------QSEYNGPTPIMSVVHGDADYTVLPGNADEIRDAML 195 (212)
T ss_pred Hhcc--------------CCcccCCCCeEEEEEcCCCceeCcchHHHHHHHHH
Confidence 1100 01122233457899999999999999998888773
No 78
>PRK10162 acetyl esterase; Provisional
Probab=99.77 E-value=8.1e-17 Score=146.52 Aligned_cols=235 Identities=17% Similarity=0.203 Sum_probs=149.2
Q ss_pred eeeEEEEEEcCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCC---CChhcHHHHHHHhcc-CCcEEEEeCCCCCCCCCCC
Q 016885 35 YKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNS---GCRADANEAAVILLP-SNITLFTLDFSGSGLSDGD 110 (381)
Q Consensus 35 ~~~~~v~~~~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~---~~~~~~~~~~~~l~~-~G~~vi~~D~~G~G~S~~~ 110 (381)
...+++.+...+| .+.+.+|.|. ....|+||++||+| ++...+..+++.|+. .|+.|+.+|||.....
T Consensus 55 ~~~~~~~i~~~~g-~i~~~~y~P~----~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~--- 126 (318)
T PRK10162 55 MATRAYMVPTPYG-QVETRLYYPQ----PDSQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEA--- 126 (318)
T ss_pred ceEEEEEEecCCC-ceEEEEECCC----CCCCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCC---
Confidence 4566788887777 5888999985 23469999999988 555667777888887 4999999999965432
Q ss_pred CcCCCcchhhHHHHHHHHHHhc---CC--CCcEEEEEEchhHHHHHHhhccC-------CCccEEEeccCccCHHHHHHH
Q 016885 111 YVSLGWHEKDDLKVVVSYLRGN---KQ--TSRIGLWGRSMGAVTSLLYGAED-------PSIAGMVLDSAFSDLFDLMLE 178 (381)
Q Consensus 111 ~~~~~~~~~~d~~~~i~~l~~~---~~--~~~i~l~G~S~GG~~a~~~a~~~-------p~v~~vi~~~~~~~~~~~~~~ 178 (381)
... ...+|+.++++|+.+. .+ .++|+|+|+|+||.+++.++... +.++++++++|..+.....
T Consensus 127 ~~p---~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~-- 201 (318)
T PRK10162 127 RFP---QAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLRDSV-- 201 (318)
T ss_pred CCC---CcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCCCCCh--
Confidence 111 2368899999998764 23 37999999999999999888642 2488999999887643210
Q ss_pred HHHHhhhhCCcccHHHHHHHHHHHhhhhhhccccccchh-hcCCCCCCcEEEEeeCCCCccChHHHHHHHHHc---CCCc
Q 016885 179 LVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCL-KLAPKTFIPALFGHASEDKFIRARHSDLIFNAY---AGDK 254 (381)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~---~~~~ 254 (381)
...........+.......+.............-..++. ..+.+.-.|+++++|+.|++.+ ++..+++++ +...
T Consensus 202 s~~~~~~~~~~l~~~~~~~~~~~y~~~~~~~~~p~~~p~~~~l~~~lPp~~i~~g~~D~L~d--e~~~~~~~L~~aGv~v 279 (318)
T PRK10162 202 SRRLLGGVWDGLTQQDLQMYEEAYLSNDADRESPYYCLFNNDLTRDVPPCFIAGAEFDPLLD--DSRLLYQTLAAHQQPC 279 (318)
T ss_pred hHHHhCCCccccCHHHHHHHHHHhCCCccccCCcccCcchhhhhcCCCCeEEEecCCCcCcC--hHHHHHHHHHHcCCCE
Confidence 011111111112222222222222211110000000110 1121223699999999999874 566777666 4467
Q ss_pred eEEEeCC-CCCCC-------ChhhHHHHHHHHHHhhcC
Q 016885 255 NIIKFDG-DHNSS-------RPQFYYDSVSIFFYNVLH 284 (381)
Q Consensus 255 ~~~~~~g-gH~~~-------~~~~~~~~i~~fl~~~l~ 284 (381)
++++++| .|.+. ...+..+.+.+||++.++
T Consensus 280 ~~~~~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~~~ 317 (318)
T PRK10162 280 EFKLYPGTLHAFLHYSRMMDTADDALRDGAQFFTAQLK 317 (318)
T ss_pred EEEEECCCceehhhccCchHHHHHHHHHHHHHHHHHhc
Confidence 8899998 89754 134667778889988764
No 79
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.77 E-value=2.9e-16 Score=156.76 Aligned_cols=204 Identities=18% Similarity=0.223 Sum_probs=142.7
Q ss_pred HHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchhhHHHHHHHHHHhcC--------------C--CCcEEEEEEchhH
Q 016885 84 EAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNK--------------Q--TSRIGLWGRSMGA 147 (381)
Q Consensus 84 ~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~i~~l~~~~--------------~--~~~i~l~G~S~GG 147 (381)
.+.+.|+++||+|+.+|.||+|.|+|.....+..+.+|..++|+|+..+. . .++|+++|.|+||
T Consensus 270 ~~~~~~~~rGYaVV~~D~RGtg~SeG~~~~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G 349 (767)
T PRK05371 270 SLNDYFLPRGFAVVYVSGIGTRGSDGCPTTGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLG 349 (767)
T ss_pred hHHHHHHhCCeEEEEEcCCCCCCCCCcCccCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHH
Confidence 45678999999999999999999999887776778999999999998532 1 2799999999999
Q ss_pred HHHHHhhccCCC-ccEEEeccCccCHHHHHHHH-----------------HHHhhhh--CCcc---cHHHHHHHHH---H
Q 016885 148 VTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLEL-----------------VDVYKIR--LPKF---TVKMAVQYMR---R 201 (381)
Q Consensus 148 ~~a~~~a~~~p~-v~~vi~~~~~~~~~~~~~~~-----------------~~~~~~~--~~~~---~~~~~~~~~~---~ 201 (381)
++++.+|+..+. ++++|..++..+..+..... ......+ .+.. ........+. .
T Consensus 350 ~~~~~aAa~~pp~LkAIVp~a~is~~yd~yr~~G~~~~~~g~~ged~d~l~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 429 (767)
T PRK05371 350 TLPNAVATTGVEGLETIIPEAAISSWYDYYRENGLVRAPGGYQGEDLDVLAELTYSRNLLAGDYLRHNEACEKLLAELTA 429 (767)
T ss_pred HHHHHHHhhCCCcceEEEeeCCCCcHHHHhhcCCceeccCCcCCcchhhHHHHhhhcccCcchhhcchHHHHHHHhhhhh
Confidence 999999887765 99999999888765533220 0000000 0000 0000000000 0
Q ss_pred Hhhhh-hhc--cccccchhhcCCCCCCcEEEEeeCCCCccChHHHHHHHHHcC---CCceEEEeCCCCCCC---ChhhHH
Q 016885 202 VIQKK-AKF--DIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA---GDKNIIKFDGDHNSS---RPQFYY 272 (381)
Q Consensus 202 ~~~~~-~~~--~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~---~~~~~~~~~ggH~~~---~~~~~~ 272 (381)
..... ..+ .+...+....+.++++|+|++||..|..+++.++.++++++. ..+++++.+++|... ...++.
T Consensus 430 ~~~~~~~~y~~fW~~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~~g~H~~~~~~~~~d~~ 509 (767)
T PRK05371 430 AQDRKTGDYNDFWDDRNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLHQGGHVYPNNWQSIDFR 509 (767)
T ss_pred hhhhcCCCccHHHHhCCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEeCCCccCCCchhHHHHH
Confidence 00000 000 112234556778899999999999999999999989888873 356788888899754 345778
Q ss_pred HHHHHHHHhhcCCCC
Q 016885 273 DSVSIFFYNVLHPPQ 287 (381)
Q Consensus 273 ~~i~~fl~~~l~~~~ 287 (381)
+.+.+||.++|....
T Consensus 510 e~~~~Wfd~~LkG~~ 524 (767)
T PRK05371 510 DTMNAWFTHKLLGID 524 (767)
T ss_pred HHHHHHHHhccccCC
Confidence 889999999998654
No 80
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.72 E-value=3.2e-16 Score=149.33 Aligned_cols=214 Identities=14% Similarity=0.078 Sum_probs=135.6
Q ss_pred EEEEEEeecCCCCCCCCCcEEEEeCCCCCChhcH-----HHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchhhHHH
Q 016885 49 VLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADA-----NEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLK 123 (381)
Q Consensus 49 ~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~-----~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~ 123 (381)
.+....|.|.. .....+.||++||+......+ ..+++.|+++||.|+++|++|+|.+........ ...+++.
T Consensus 173 ~~eLi~Y~P~t--~~~~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~dd-Y~~~~i~ 249 (532)
T TIGR01838 173 LFQLIQYEPTT--ETVHKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKTFDD-YIRDGVI 249 (532)
T ss_pred cEEEEEeCCCC--CcCCCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCChhh-hHHHHHH
Confidence 34555777752 234678999999997655544 378999999999999999999998865432111 2245688
Q ss_pred HHHHHHHhcCCCCcEEEEEEchhHHHHH----HhhccC-CC-ccEEEeccCccCHHH--------------HHHHHHHHh
Q 016885 124 VVVSYLRGNKQTSRIGLWGRSMGAVTSL----LYGAED-PS-IAGMVLDSAFSDLFD--------------LMLELVDVY 183 (381)
Q Consensus 124 ~~i~~l~~~~~~~~i~l~G~S~GG~~a~----~~a~~~-p~-v~~vi~~~~~~~~~~--------------~~~~~~~~~ 183 (381)
++++++++..+.++++++||||||.++. .+++.. ++ +++++++++..++.. .+.......
T Consensus 250 ~al~~v~~~~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~~~~ 329 (532)
T TIGR01838 250 AALEVVEAITGEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEEIVAGIERQNGGG 329 (532)
T ss_pred HHHHHHHHhcCCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCchhHHHHHHHHHhc
Confidence 8999998887889999999999999852 244444 54 899998877554321 011111100
Q ss_pred h------------hh-------------------------------CCcccHHHHHHHHHHHhhhhhhc--cccccchhh
Q 016885 184 K------------IR-------------------------------LPKFTVKMAVQYMRRVIQKKAKF--DIMDLNCLK 218 (381)
Q Consensus 184 ~------------~~-------------------------------~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 218 (381)
+ .. .+.++.....++++......... .+.-.....
T Consensus 330 G~lpg~~m~~~F~~lrp~~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~~G~~~v~g~~~ 409 (532)
T TIGR01838 330 GYLDGRQMAVTFSLLRENDLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNLPGKMHNFYLRNLYLQNALTTGGLEVCGVRL 409 (532)
T ss_pred CCCCHHHHHHHHHhcChhhHHHHHHHHHHhcCCCccchhHHHHhccCccchHHHHHHHHHHHHhcCCCcCCeeEECCEec
Confidence 0 00 01111122222222221111100 000012234
Q ss_pred cCCCCCCcEEEEeeCCCCccChHHHHHHHHHcCCCceEEEeCCCCCC
Q 016885 219 LAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDGDHNS 265 (381)
Q Consensus 219 ~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~ggH~~ 265 (381)
.+.++++|+|+++|++|.++|.+.+..+.+.+++.+.+++.++||..
T Consensus 410 dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i~~~~~~vL~~sGHi~ 456 (532)
T TIGR01838 410 DLSKVKVPVYIIATREDHIAPWQSAYRGAALLGGPKTFVLGESGHIA 456 (532)
T ss_pred chhhCCCCEEEEeeCCCCcCCHHHHHHHHHHCCCCEEEEECCCCCch
Confidence 67789999999999999999999999999998876555444459983
No 81
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.71 E-value=1.1e-15 Score=141.67 Aligned_cols=230 Identities=10% Similarity=0.068 Sum_probs=142.5
Q ss_pred eEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhc-------------HHHHH---HHhccCCcEEEEeCCCCCCCCC---
Q 016885 48 HVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD-------------ANEAA---VILLPSNITLFTLDFSGSGLSD--- 108 (381)
Q Consensus 48 ~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~-------------~~~~~---~~l~~~G~~vi~~D~~G~G~S~--- 108 (381)
.+|.|..|-.. ...+.++||++|+++++... |..++ +.|-..-|-|+++|..|.|.|.
T Consensus 41 ~~~~Y~t~G~l---n~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~ 117 (389)
T PRK06765 41 VQMGYETYGTL---NRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPN 117 (389)
T ss_pred ceEEEEecccc---CCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCC
Confidence 56667666432 23456999999999986421 33332 2344456999999999976531
Q ss_pred ----C---------CCc--CCCcchhhHHHHHHHHHHhcCCCCcEE-EEEEchhHHHHHHhhccCCC-ccEEEeccCccC
Q 016885 109 ----G---------DYV--SLGWHEKDDLKVVVSYLRGNKQTSRIG-LWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSD 171 (381)
Q Consensus 109 ----~---------~~~--~~~~~~~~d~~~~i~~l~~~~~~~~i~-l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~ 171 (381)
+ ... .+....+.|+.+.+..+.+..+++++. ++||||||++++.+|.++|+ ++++|++++...
T Consensus 118 ~g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~~ 197 (389)
T PRK06765 118 VITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNPQ 197 (389)
T ss_pred CCCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEecCCC
Confidence 1 100 011123677777766666777888886 99999999999999999998 999999876543
Q ss_pred HHHH-----HHHHHHHhhhhCCcc----------c---HHHH--------------------------------------
Q 016885 172 LFDL-----MLELVDVYKIRLPKF----------T---VKMA-------------------------------------- 195 (381)
Q Consensus 172 ~~~~-----~~~~~~~~~~~~~~~----------~---~~~~-------------------------------------- 195 (381)
.... ......... ..|.+ + ....
T Consensus 198 ~~~~~~~~~~~~~~~ai~-~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~~~~~ 276 (389)
T PRK06765 198 NDAWTSVNVLQNWAEAIR-LDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVSTLTSF 276 (389)
T ss_pred CChhHHHHHHHHHHHHHH-hCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccccchhhH
Confidence 2111 110100000 00000 0 0000
Q ss_pred HHHHHHHhh----------------hhhhccccc--cchhhcCCCCCCcEEEEeeCCCCccChHHHHHHHHHcCC---Cc
Q 016885 196 VQYMRRVIQ----------------KKAKFDIMD--LNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAG---DK 254 (381)
Q Consensus 196 ~~~~~~~~~----------------~~~~~~~~~--~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~---~~ 254 (381)
..++..... ....++... -+....+.++++|+|+|+|+.|.++|++.++.+.+.++. ..
T Consensus 277 e~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~a 356 (389)
T PRK06765 277 EKEINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQGKYA 356 (389)
T ss_pred HHHHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCe
Confidence 001100000 000000000 023456778999999999999999999999999998863 46
Q ss_pred eEEEeCC--CCCCC--ChhhHHHHHHHHHHh
Q 016885 255 NIIKFDG--DHNSS--RPQFYYDSVSIFFYN 281 (381)
Q Consensus 255 ~~~~~~g--gH~~~--~~~~~~~~i~~fl~~ 281 (381)
+++++++ ||... .++++.+.|.+||++
T Consensus 357 ~l~~I~s~~GH~~~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 357 EVYEIESINGHMAGVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred EEEEECCCCCcchhhcCHHHHHHHHHHHHcc
Confidence 7888863 89844 788999999999864
No 82
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.70 E-value=7e-16 Score=134.41 Aligned_cols=232 Identities=18% Similarity=0.202 Sum_probs=146.2
Q ss_pred eEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhcHHHHHHHhccC-CcEEEEeCCCCCCCCCCCCcCCCcchhhHHHHHH
Q 016885 48 HVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPS-NITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVV 126 (381)
Q Consensus 48 ~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~-G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~i 126 (381)
..|.+..++-. ......|.++++||+.|+...|..+...|++. |-.|+++|.|.||.|+..........++|+...+
T Consensus 36 ~~l~y~~~~~~--~~~~~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h~~~~ma~dv~~Fi 113 (315)
T KOG2382|consen 36 VRLAYDSVYSS--ENLERAPPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKITVHNYEAMAEDVKLFI 113 (315)
T ss_pred cccceeeeecc--cccCCCCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCccccccCHHHHHHHHHHHH
Confidence 44555554211 23467899999999999999999999999885 7899999999999998543332222367777777
Q ss_pred HHHHhcCCCCcEEEEEEchhH-HHHHHhhccCCC-ccEEEe-ccCccCH---HHHHHHHHHHhhhhC------Ccc--c-
Q 016885 127 SYLRGNKQTSRIGLWGRSMGA-VTSLLYGAEDPS-IAGMVL-DSAFSDL---FDLMLELVDVYKIRL------PKF--T- 191 (381)
Q Consensus 127 ~~l~~~~~~~~i~l~G~S~GG-~~a~~~a~~~p~-v~~vi~-~~~~~~~---~~~~~~~~~~~~~~~------~~~--~- 191 (381)
+.........++.++|||||| .+++..+...|. +..+|+ ..++... .....+......... +.. .
T Consensus 114 ~~v~~~~~~~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~ 193 (315)
T KOG2382|consen 114 DGVGGSTRLDPVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRKEAL 193 (315)
T ss_pred HHcccccccCCceecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHHHHH
Confidence 777655556899999999999 777777788887 555444 3322110 111111111100000 000 0
Q ss_pred --------HHHHHHHHHHHhhh--hhh-ccc--------------cccchhhcC--CCCCCcEEEEeeCCCCccChHHHH
Q 016885 192 --------VKMAVQYMRRVIQK--KAK-FDI--------------MDLNCLKLA--PKTFIPALFGHASEDKFIRARHSD 244 (381)
Q Consensus 192 --------~~~~~~~~~~~~~~--~~~-~~~--------------~~~~~~~~~--~~i~~Pvlii~G~~D~~v~~~~~~ 244 (381)
.....+++...+.. ... +.+ ...+....+ .....|+|+++|.++.+++.++-.
T Consensus 194 ~~l~~~~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~S~fv~~~~~~ 273 (315)
T KOG2382|consen 194 KSLIEVGFDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGLQSKFVPDEHYP 273 (315)
T ss_pred HHHHHHhcchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecCCCCCcChhHHH
Confidence 01111222222210 000 000 001111112 456789999999999999998888
Q ss_pred HHHHHcCCCceEEEeC-CCCCC--CChhhHHHHHHHHHHhh
Q 016885 245 LIFNAYAGDKNIIKFD-GDHNS--SRPQFYYDSVSIFFYNV 282 (381)
Q Consensus 245 ~l~~~~~~~~~~~~~~-ggH~~--~~~~~~~~~i~~fl~~~ 282 (381)
++.+.++. .+++.++ +||+. ..|+++.+.|.+|+.++
T Consensus 274 ~~~~~fp~-~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 274 RMEKIFPN-VEVHELDEAGHWVHLEKPEEFIESISEFLEEP 313 (315)
T ss_pred HHHHhccc-hheeecccCCceeecCCHHHHHHHHHHHhccc
Confidence 88777766 5888888 69994 48999999999998654
No 83
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.69 E-value=2.4e-16 Score=140.50 Aligned_cols=218 Identities=19% Similarity=0.244 Sum_probs=120.4
Q ss_pred CCCCCccccccccccccCcceeeEEEEEEcCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhcH------------
Q 016885 15 AEYNPDQYLWERDFMLAGRSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADA------------ 82 (381)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~------------ 82 (381)
..+.|...-++ ..-.|+.+.+.|...++..+.+++.+|.+. +++.|+||++||-++..+..
T Consensus 71 ~~~~p~~l~~e-----qrdGY~~EKv~f~~~p~~~vpaylLvPd~~--~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~ 143 (390)
T PF12715_consen 71 KDPEPEVLETE-----QRDGYTREKVEFNTTPGSRVPAYLLVPDGA--KGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKD 143 (390)
T ss_dssp -----EEEEEE-----EETTEEEEEEEE--STTB-EEEEEEEETT----S-EEEEEEE--TT--HHHHCT---SSGCG--
T ss_pred CCCCCeEEEEE-----ecCCeEEEEEEEEccCCeeEEEEEEecCCC--CCCCCEEEEeCCCCCCcccccCCcccccccch
Confidence 34566553222 233478889999999999999999999742 68899999999988665331
Q ss_pred ------HHHHHHhccCCcEEEEeCCCCCCCCCCCCcCC-----------------Ccc----hhhHHHHHHHHHHhcCCC
Q 016885 83 ------NEAAVILLPSNITLFTLDFSGSGLSDGDYVSL-----------------GWH----EKDDLKVVVSYLRGNKQT 135 (381)
Q Consensus 83 ------~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~-----------------~~~----~~~d~~~~i~~l~~~~~~ 135 (381)
...+..|+++||.|+++|.+|+|+........ ++. ...|...+++||.++..+
T Consensus 144 ~~~~~~~~~g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeV 223 (390)
T PF12715_consen 144 DYDDPKQDYGDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEV 223 (390)
T ss_dssp STTSTTT-HHHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTE
T ss_pred hhccccccHHHHHHhCCCEEEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCccc
Confidence 13578899999999999999999875321110 111 123556689999999876
Q ss_pred --CcEEEEEEchhHHHHHHhhccCCCccEEEeccCccCHHHHHHHHH--H---------HhhhhCCcccHHHHHHHHHHH
Q 016885 136 --SRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELV--D---------VYKIRLPKFTVKMAVQYMRRV 202 (381)
Q Consensus 136 --~~i~l~G~S~GG~~a~~~a~~~p~v~~vi~~~~~~~~~~~~~~~~--~---------~~~~~~~~~~~~~~~~~~~~~ 202 (381)
++|+++|+||||..++.+++..++|++.|..+......+....+. . .....+|.+...
T Consensus 224 D~~RIG~~GfSmGg~~a~~LaALDdRIka~v~~~~l~~~~~~~~~mt~~~~~~~~~~~~~~~~~iPgl~r~--------- 294 (390)
T PF12715_consen 224 DPDRIGCMGFSMGGYRAWWLAALDDRIKATVANGYLCTTQERALLMTMPNNNGLRGFPNCICNYIPGLWRY--------- 294 (390)
T ss_dssp EEEEEEEEEEGGGHHHHHHHHHH-TT--EEEEES-B--HHHHHHHB----TTS----SS-GGG--TTCCCC---------
T ss_pred CccceEEEeecccHHHHHHHHHcchhhHhHhhhhhhhccchhhHhhccccccccCcCcchhhhhCccHHhh---------
Confidence 899999999999999999999999999888776654433211100 0 000112221100
Q ss_pred hhhhhhccccccchhhcCC-CCCCcEEEEeeCCCCccChHHHHHHHHHcCC--CceEEEeCC
Q 016885 203 IQKKAKFDIMDLNCLKLAP-KTFIPALFGHASEDKFIRARHSDLIFNAYAG--DKNIIKFDG 261 (381)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~-~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~--~~~~~~~~g 261 (381)
+ +..+.+. --..|+|++.|..|..+|. ++..++.++. +.+++.+++
T Consensus 295 ------~-----D~PdIasliAPRPll~~nG~~Dklf~i--V~~AY~~~~~p~n~~~~~~p~ 343 (390)
T PF12715_consen 295 ------F-----DFPDIASLIAPRPLLFENGGKDKLFPI--VRRAYAIMGAPDNFQIHHYPK 343 (390)
T ss_dssp -------------HHHHHHTTTTS-EEESS-B-HHHHHH--HHHHHHHTT-GGGEEE---GG
T ss_pred ------C-----ccHHHHHHhCCCcchhhcCCcccccHH--HHHHHHhcCCCcceEEeeccc
Confidence 0 0001111 1136999999999998865 6777777754 445555554
No 84
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.68 E-value=4.9e-15 Score=122.56 Aligned_cols=223 Identities=17% Similarity=0.212 Sum_probs=130.7
Q ss_pred EEEEEcCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCC-CCCCCCCcCCCcc
Q 016885 39 DLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGS-GLSDGDYVSLGWH 117 (381)
Q Consensus 39 ~v~~~~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~-G~S~~~~~~~~~~ 117 (381)
+..+...+|.+|..+.-.|+.. .....++||+..|++.....+..++.+|+..||.|+.+|.-.| |.|+|....+...
T Consensus 4 dhvi~~~~~~~I~vwet~P~~~-~~~~~~tiliA~Gf~rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSsG~I~eftms 82 (294)
T PF02273_consen 4 DHVIRLEDGRQIRVWETRPKNN-EPKRNNTILIAPGFARRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSSGDINEFTMS 82 (294)
T ss_dssp EEEEEETTTEEEEEEEE---TT-S---S-EEEEE-TT-GGGGGGHHHHHHHHTTT--EEEE---B-------------HH
T ss_pred cceeEcCCCCEEEEeccCCCCC-CcccCCeEEEecchhHHHHHHHHHHHHHhhCCeEEEeccccccccCCCCChhhcchH
Confidence 4456778999999988888742 3355699999999999999999999999999999999999988 9999987777654
Q ss_pred h-hhHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhhccCCCccEEEeccCccCHHHHHHHHHHHhhhhCCcccHH---
Q 016885 118 E-KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVK--- 193 (381)
Q Consensus 118 ~-~~d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~v~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 193 (381)
. ..++..+++|+... +..+++|+.-|+.|-+|+..|++- ++.-+|..-+..++...+......--...|.-...
T Consensus 83 ~g~~sL~~V~dwl~~~-g~~~~GLIAaSLSaRIAy~Va~~i-~lsfLitaVGVVnlr~TLe~al~~Dyl~~~i~~lp~dl 160 (294)
T PF02273_consen 83 IGKASLLTVIDWLATR-GIRRIGLIAASLSARIAYEVAADI-NLSFLITAVGVVNLRDTLEKALGYDYLQLPIEQLPEDL 160 (294)
T ss_dssp HHHHHHHHHHHHHHHT-T---EEEEEETTHHHHHHHHTTTS---SEEEEES--S-HHHHHHHHHSS-GGGS-GGG--SEE
T ss_pred HhHHHHHHHHHHHHhc-CCCcchhhhhhhhHHHHHHHhhcc-CcceEEEEeeeeeHHHHHHHHhccchhhcchhhCCCcc
Confidence 3 78999999999955 778999999999999999999854 68888888899998877665443322111110000
Q ss_pred -------HHHHHHHHHhhhhhhcccccc-chhhcCCCCCCcEEEEeeCCCCccChHHHHHHHHHcC-CCceEEEeCC-CC
Q 016885 194 -------MAVQYMRRVIQKKAKFDIMDL-NCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA-GDKNIIKFDG-DH 263 (381)
Q Consensus 194 -------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~-~~~~~~~~~g-gH 263 (381)
....|...++. ..+... +....++++++|++.+++.+|..|.......+...+. +.++++.++| .|
T Consensus 161 dfeGh~l~~~vFv~dc~e----~~w~~l~ST~~~~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~H 236 (294)
T PF02273_consen 161 DFEGHNLGAEVFVTDCFE----HGWDDLDSTINDMKRLSIPFIAFTANDDDWVKQSEVEELLDNINSNKCKLYSLPGSSH 236 (294)
T ss_dssp EETTEEEEHHHHHHHHHH----TT-SSHHHHHHHHTT--S-EEEEEETT-TTS-HHHHHHHHTT-TT--EEEEEETT-SS
T ss_pred cccccccchHHHHHHHHH----cCCccchhHHHHHhhCCCCEEEEEeCCCccccHHHHHHHHHhcCCCceeEEEecCccc
Confidence 01112333221 111111 2335677789999999999999999999999888774 4466777787 89
Q ss_pred CCCCh
Q 016885 264 NSSRP 268 (381)
Q Consensus 264 ~~~~~ 268 (381)
.....
T Consensus 237 dL~en 241 (294)
T PF02273_consen 237 DLGEN 241 (294)
T ss_dssp -TTSS
T ss_pred hhhhC
Confidence 86533
No 85
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.67 E-value=2.8e-15 Score=128.93 Aligned_cols=181 Identities=19% Similarity=0.174 Sum_probs=108.8
Q ss_pred CCCCCcEEEEeCCCCCChhcHHHHHH-HhccCCcEEEEeCCCC------CCC---CCCC---CcCCCcch-------hhH
Q 016885 62 EDTPLPCVVYCHGNSGCRADANEAAV-ILLPSNITLFTLDFSG------SGL---SDGD---YVSLGWHE-------KDD 121 (381)
Q Consensus 62 ~~~~~p~vv~~HG~~~~~~~~~~~~~-~l~~~G~~vi~~D~~G------~G~---S~~~---~~~~~~~~-------~~d 121 (381)
.+...++||++||+|++...+..... .+......++.++-|. .|. +=.+ ........ .+.
T Consensus 10 ~~~~~~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~ 89 (216)
T PF02230_consen 10 KGKAKPLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAER 89 (216)
T ss_dssp SST-SEEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHH
T ss_pred CCCCceEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHH
Confidence 46788999999999999876666555 3344567777776552 122 1000 00001011 223
Q ss_pred HHHHHHHHHhcC-CCCcEEEEEEchhHHHHHHhhccCCC-ccEEEeccCccCHHHHHHHHHHHhhhhCCcccHHHHHHHH
Q 016885 122 LKVVVSYLRGNK-QTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYM 199 (381)
Q Consensus 122 ~~~~i~~l~~~~-~~~~i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (381)
+.++++...+.. +.++|++.|+|+||.+++.++.++|. +.++|.+++........ .
T Consensus 90 l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~~-----------~----------- 147 (216)
T PF02230_consen 90 LDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESEL-----------E----------- 147 (216)
T ss_dssp HHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCCC-----------H-----------
T ss_pred HHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccccccc-----------c-----------
Confidence 334444333322 33899999999999999999999998 99999999875321000 0
Q ss_pred HHHhhhhhhccccccchhhcCCCCCCcEEEEeeCCCCccChHHHHHHHHHcC---CCceEEEeCC-CCCCCChhhHHHHH
Q 016885 200 RRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA---GDKNIIKFDG-DHNSSRPQFYYDSV 275 (381)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~---~~~~~~~~~g-gH~~~~~~~~~~~i 275 (381)
...... -++|++++||..|+++|.+.++...+.+. .+.++..+++ ||... .+..+.+
T Consensus 148 ---------------~~~~~~--~~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i~--~~~~~~~ 208 (216)
T PF02230_consen 148 ---------------DRPEAL--AKTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEIS--PEELRDL 208 (216)
T ss_dssp ---------------CCHCCC--CTS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS----HHHHHHH
T ss_pred ---------------cccccc--CCCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCCC--HHHHHHH
Confidence 000111 16899999999999999998888888773 3568889995 99875 5677889
Q ss_pred HHHHHhhc
Q 016885 276 SIFFYNVL 283 (381)
Q Consensus 276 ~~fl~~~l 283 (381)
.+||++++
T Consensus 209 ~~~l~~~~ 216 (216)
T PF02230_consen 209 REFLEKHI 216 (216)
T ss_dssp HHHHHHH-
T ss_pred HHHHhhhC
Confidence 99998763
No 86
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.67 E-value=2e-14 Score=122.44 Aligned_cols=214 Identities=20% Similarity=0.306 Sum_probs=140.0
Q ss_pred eeeEEEEEEcCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCC
Q 016885 35 YKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSL 114 (381)
Q Consensus 35 ~~~~~v~~~~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~ 114 (381)
..+..+.+...+|..+...--+-...+.+.+..+||-+||.+|+..++..+...|.+.|++++.+++||+|.+++.+...
T Consensus 4 ~~~~~~k~~~~~~~~~~~~a~y~D~~~~gs~~gTVv~~hGsPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~ 83 (297)
T PF06342_consen 4 LVRKLVKFQAENGKIVTVQAVYEDSLPSGSPLGTVVAFHGSPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQ 83 (297)
T ss_pred eEEEEEEcccccCceEEEEEEEEecCCCCCCceeEEEecCCCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccc
Confidence 45567778888887666554443333455667799999999999999999999999999999999999999998754432
Q ss_pred CcchhhHHHHHHHHHHhcCCC-CcEEEEEEchhHHHHHHhhccCCCccEEEeccCcc-------CHHHHHHHHHHHhhhh
Q 016885 115 GWHEKDDLKVVVSYLRGNKQT-SRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFS-------DLFDLMLELVDVYKIR 186 (381)
Q Consensus 115 ~~~~~~d~~~~i~~l~~~~~~-~~i~l~G~S~GG~~a~~~a~~~p~v~~vi~~~~~~-------~~~~~~~~~~~~~~~~ 186 (381)
+. -.+-...++.+.+..+. ++++++|||.||-.|+.++..+| ..++++++|.. .+...+......+. .
T Consensus 84 -~~-n~er~~~~~~ll~~l~i~~~~i~~gHSrGcenal~la~~~~-~~g~~lin~~G~r~HkgIrp~~r~~~i~~l~~-~ 159 (297)
T PF06342_consen 84 -YT-NEERQNFVNALLDELGIKGKLIFLGHSRGCENALQLAVTHP-LHGLVLINPPGLRPHKGIRPLSRMETINYLYD-L 159 (297)
T ss_pred -cC-hHHHHHHHHHHHHHcCCCCceEEEEeccchHHHHHHHhcCc-cceEEEecCCccccccCcCHHHHHHHHHHHHH-H
Confidence 11 23444555555555566 88999999999999999999997 66888887754 11111111111111 1
Q ss_pred CCcccHHHHHHHHHHHhhhh--------------hhcccc-ccchhhcCCCCCCcEEEEeeCCCCccChHHHHHHHHHcC
Q 016885 187 LPKFTVKMAVQYMRRVIQKK--------------AKFDIM-DLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA 251 (381)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~--------------~~~~~~-~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~ 251 (381)
+|.+........+-+.+.-+ ..+++. .....+.+.+-++|+|+++|.+|.++..+.+.++...+.
T Consensus 160 lp~~~~~~i~~~~y~~iG~KV~~GeeA~na~r~m~~~df~~q~~~I~~ln~~~ikvli~ygg~DhLIEeeI~~E~a~~f~ 239 (297)
T PF06342_consen 160 LPRFIINAIMYFYYRMIGFKVSDGEEAINAMRSMQNCDFEEQKEYIDKLNKKPIKVLIAYGGKDHLIEEEISFEFAMKFK 239 (297)
T ss_pred hhHHHHHHHHHHHHHHhCeeecChHHHHHHHHHHHhcCHHHHHHHHHHhccCCCcEEEEEcCcchhhHHHHHHHHHHHhC
Confidence 23222222211111111000 011111 113345566667999999999999998888888877764
Q ss_pred C
Q 016885 252 G 252 (381)
Q Consensus 252 ~ 252 (381)
+
T Consensus 240 ~ 240 (297)
T PF06342_consen 240 G 240 (297)
T ss_pred C
Confidence 4
No 87
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.66 E-value=1e-15 Score=132.82 Aligned_cols=180 Identities=19% Similarity=0.225 Sum_probs=114.7
Q ss_pred cEEEEeCCCCCCCCCCC--CcCCCcchhhHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhhccCCC-ccEEEeccCcc
Q 016885 94 ITLFTLDFSGSGLSDGD--YVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFS 170 (381)
Q Consensus 94 ~~vi~~D~~G~G~S~~~--~~~~~~~~~~d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~ 170 (381)
|.|+++|.||+|.|++. ..... ...+|+.+.++.+++..+.+++.++||||||.+++.+|+.+|+ |+++|++++..
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~~ 79 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPD-YTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERVKKLVLISPPP 79 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCT-HCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESS
T ss_pred CEEEEEeCCCCCCCCCCccCCccc-ccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEeeec
Confidence 78999999999999841 22222 3368888888888888888889999999999999999999999 99999998851
Q ss_pred C----H-----HH-HHHHHH-H---H-hhhhCCcccHHH---------------HHHHH-HHHhh--------hh---hh
Q 016885 171 D----L-----FD-LMLELV-D---V-YKIRLPKFTVKM---------------AVQYM-RRVIQ--------KK---AK 208 (381)
Q Consensus 171 ~----~-----~~-~~~~~~-~---~-~~~~~~~~~~~~---------------~~~~~-~~~~~--------~~---~~ 208 (381)
. . .. ...... . . ............ ..+.. ..... .. ..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (230)
T PF00561_consen 80 DLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFAETDAFDNMFWNAL 159 (230)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred cchhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccchhhhhHHHHHHHHhhhccccc
Confidence 0 0 00 000000 0 0 000000000000 00000 00000 00 00
Q ss_pred ccccccchhhcCCCCCCcEEEEeeCCCCccChHHHHHHHHHcCCCceEEEeCC-CCCCC--ChhhHHHHH
Q 016885 209 FDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSV 275 (381)
Q Consensus 209 ~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~g-gH~~~--~~~~~~~~i 275 (381)
......+....+..+++|+++++|++|.++|++.+..+.+.+++ .+++++++ ||... .++++.+.|
T Consensus 160 ~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~~-~~~~~~~~~GH~~~~~~~~~~~~~i 228 (230)
T PF00561_consen 160 GYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIPN-SQLVLIEGSGHFAFLEGPDEFNEII 228 (230)
T ss_dssp HHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHSTT-EEEEEETTCCSTHHHHSHHHHHHHH
T ss_pred cccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcCC-CEEEECCCCChHHHhcCHHhhhhhh
Confidence 00111133456677999999999999999999999998888877 57888887 99843 566665554
No 88
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.65 E-value=5e-15 Score=124.72 Aligned_cols=128 Identities=24% Similarity=0.316 Sum_probs=92.9
Q ss_pred eeEEEEEEcCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhcHHHHHHHhccC-CcEEEEeCCCCCCCCCCCCcC-
Q 016885 36 KRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPS-NITLFTLDFSGSGLSDGDYVS- 113 (381)
Q Consensus 36 ~~~~v~~~~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~-G~~vi~~D~~G~G~S~~~~~~- 113 (381)
+++++.+...++ ++..++-.|. ....|++++.||+|.+.-.|..++..+..+ ..+|+++|+||||++.-+...
T Consensus 49 ekedv~i~~~~~-t~n~Y~t~~~----~t~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~d 123 (343)
T KOG2564|consen 49 EKEDVSIDGSDL-TFNVYLTLPS----ATEGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKVENEDD 123 (343)
T ss_pred cccccccCCCcc-eEEEEEecCC----CCCccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCccccCChhh
Confidence 455666665554 5665555553 567899999999999999999999887764 567899999999998744322
Q ss_pred CCcc-hhhHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhhcc--CCCccEEEeccCc
Q 016885 114 LGWH-EKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAE--DPSIAGMVLDSAF 169 (381)
Q Consensus 114 ~~~~-~~~d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~--~p~v~~vi~~~~~ 169 (381)
.... ...|+.++++++-.. ...+|+|+||||||.+|.+.|.. -|.+.|++.+.-.
T Consensus 124 lS~eT~~KD~~~~i~~~fge-~~~~iilVGHSmGGaIav~~a~~k~lpsl~Gl~viDVV 181 (343)
T KOG2564|consen 124 LSLETMSKDFGAVIKELFGE-LPPQIILVGHSMGGAIAVHTAASKTLPSLAGLVVIDVV 181 (343)
T ss_pred cCHHHHHHHHHHHHHHHhcc-CCCceEEEeccccchhhhhhhhhhhchhhhceEEEEEe
Confidence 2222 167777777777543 23789999999999999887765 3557888776543
No 89
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.65 E-value=7.7e-15 Score=152.81 Aligned_cols=231 Identities=15% Similarity=0.131 Sum_probs=136.3
Q ss_pred EEEEEeecCCCCC--CCCCcEEEEeCCCCCChhcHHH-----HHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchhh--
Q 016885 50 LQCSHYMPSPFPE--DTPLPCVVYCHGNSGCRADANE-----AAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKD-- 120 (381)
Q Consensus 50 l~~~~~~P~~~~~--~~~~p~vv~~HG~~~~~~~~~~-----~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~-- 120 (381)
+..+.|.|..... ....++||++||++.+...|.. ++..|.++||.|+++|+ |.++.......+...+
T Consensus 49 ~~l~~y~~~~~~~~~~~~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~~~~~~~l~~~i 125 (994)
T PRK07868 49 YRLRRYFPPDNRPGQPPVGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVIDF---GSPDKVEGGMERNLADHV 125 (994)
T ss_pred EEEEEeCCCCccccccCCCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEcC---CCCChhHcCccCCHHHHH
Confidence 4444677753211 2356899999999988887764 37889999999999995 4444321111112123
Q ss_pred -HHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhhccC-CC-ccEEEeccCccCHH-----H---HH-H--------HHH
Q 016885 121 -DLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAED-PS-IAGMVLDSAFSDLF-----D---LM-L--------ELV 180 (381)
Q Consensus 121 -d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~-p~-v~~vi~~~~~~~~~-----~---~~-~--------~~~ 180 (381)
.+.++++.+++.. .+++.++||||||.+++.+++.+ ++ |++++++++..++. . .. . .+.
T Consensus 126 ~~l~~~l~~v~~~~-~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (994)
T PRK07868 126 VALSEAIDTVKDVT-GRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVF 204 (994)
T ss_pred HHHHHHHHHHHHhh-CCceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccccchhhhh
Confidence 3344444444342 46899999999999999888754 43 99998865543211 0 00 0 000
Q ss_pred HHhhhhCCcc-------------cHHHH-------------------HHHH-------------HHHhhhhhhcc-ccc-
Q 016885 181 DVYKIRLPKF-------------TVKMA-------------------VQYM-------------RRVIQKKAKFD-IMD- 213 (381)
Q Consensus 181 ~~~~~~~~~~-------------~~~~~-------------------~~~~-------------~~~~~~~~~~~-~~~- 213 (381)
.. ..+|.. ..... ..+. ..........+ ...
T Consensus 205 ~~--~~~p~~~~~~~~~~l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~~~~n~~~~g 282 (994)
T PRK07868 205 NR--LDIPGWMARTGFQMLDPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMTG 282 (994)
T ss_pred hc--CCCCHHHHHHHHHhcChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhccccchHHHHHHHHHHHHhCcccCc
Confidence 00 000000 00000 0000 00000000000 000
Q ss_pred -cch---hhcCCCCCCcEEEEeeCCCCccChHHHHHHHHHcCCCceEEE-eCCCCCCC-----ChhhHHHHHHHHHHhhc
Q 016885 214 -LNC---LKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIK-FDGDHNSS-----RPQFYYDSVSIFFYNVL 283 (381)
Q Consensus 214 -~~~---~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~-~~ggH~~~-----~~~~~~~~i~~fl~~~l 283 (381)
... ...+.++++|+|+++|++|.++|++.++.+.+.+++.....+ .++||... .+++++..+.+||.++-
T Consensus 283 ~~~~~~~~~~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i~~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~~ 362 (994)
T PRK07868 283 GFAINGQMVTLADITCPVLAFVGEVDDIGQPASVRGIRRAAPNAEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWLE 362 (994)
T ss_pred eEEECCEEcchhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHhc
Confidence 001 124678999999999999999999999999999876543234 45599843 57789999999999876
Q ss_pred CCC
Q 016885 284 HPP 286 (381)
Q Consensus 284 ~~~ 286 (381)
...
T Consensus 363 ~~~ 365 (994)
T PRK07868 363 GDG 365 (994)
T ss_pred cCC
Confidence 543
No 90
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=99.65 E-value=5.4e-15 Score=138.68 Aligned_cols=136 Identities=19% Similarity=0.255 Sum_probs=114.2
Q ss_pred eeeEEEEEEcCCCeEEEEEEeecCCCCCCCCCcEEEEeC--CCCCC---hhcHHHHHH---HhccCCcEEEEeCCCCCCC
Q 016885 35 YKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCH--GNSGC---RADANEAAV---ILLPSNITLFTLDFSGSGL 106 (381)
Q Consensus 35 ~~~~~v~~~~~dg~~l~~~~~~P~~~~~~~~~p~vv~~H--G~~~~---~~~~~~~~~---~l~~~G~~vi~~D~~G~G~ 106 (381)
|...++.++..||++|...+|+|+ +.++.|+++..+ .+... ......... .++.+||.|+..|.||.|.
T Consensus 17 ~~~~~v~V~MRDGvrL~~dIy~Pa---~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~ 93 (563)
T COG2936 17 YIERDVMVPMRDGVRLAADIYRPA---GAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGG 93 (563)
T ss_pred eeeeeeeEEecCCeEEEEEEEccC---CCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEeccccccc
Confidence 667788999999999999999997 458899999999 55433 222233334 6889999999999999999
Q ss_pred CCCCCcCCCcchhhHHHHHHHHHHhcCCC-CcEEEEEEchhHHHHHHhhccCCC-ccEEEeccCccCHH
Q 016885 107 SDGDYVSLGWHEKDDLKVVVSYLRGNKQT-SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLF 173 (381)
Q Consensus 107 S~~~~~~~~~~~~~d~~~~i~~l~~~~~~-~~i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~~~ 173 (381)
|+|.+......+++|-.++|+|+.++... .+|+.+|.|++|+..+.+|+..|. +++++..++..+..
T Consensus 94 SeG~~~~~~~~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D~y 162 (563)
T COG2936 94 SEGVFDPESSREAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVDRY 162 (563)
T ss_pred CCcccceeccccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeecccccccccc
Confidence 99998877656789999999999998755 899999999999999999998876 99999888777643
No 91
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.65 E-value=4.3e-15 Score=137.77 Aligned_cols=230 Identities=18% Similarity=0.196 Sum_probs=155.7
Q ss_pred EEEEEEcCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhc---HH----HHHHHhccCCcEEEEeCCCCCCCCCCC
Q 016885 38 QDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD---AN----EAAVILLPSNITLFTLDFSGSGLSDGD 110 (381)
Q Consensus 38 ~~v~~~~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~---~~----~~~~~l~~~G~~vi~~D~~G~G~S~~~ 110 (381)
+-+.|.+..|..+.+.+|.|.+...+++.|+|+++-|+.+-.-. |. --...|+..||.|+.+|-||.-...-.
T Consensus 614 eif~fqs~tg~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlk 693 (867)
T KOG2281|consen 614 EIFSFQSKTGLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLK 693 (867)
T ss_pred hheeeecCCCcEEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchh
Confidence 34678888999999999999987777889999999999864422 21 124578899999999999997544322
Q ss_pred C-----cCCCcchhhHHHHHHHHHHhcCCC---CcEEEEEEchhHHHHHHhhccCCC-ccEEEeccCccCHHHHHHHHHH
Q 016885 111 Y-----VSLGWHEKDDLKVVVSYLRGNKQT---SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVD 181 (381)
Q Consensus 111 ~-----~~~~~~~~~d~~~~i~~l~~~~~~---~~i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~~~~~~~~~~~ 181 (381)
+ ...+..+++|-.+.+++|.++.+. ++|+|-|+|+||++++....++|+ +++.|.-+|..+.. .......
T Consensus 694 FE~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT~W~-~YDTgYT 772 (867)
T KOG2281|consen 694 FESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVTDWR-LYDTGYT 772 (867)
T ss_pred hHHHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcceeeEEeccCcceeee-eecccch
Confidence 2 233555688999999999998754 999999999999999999999999 56666655554321 1000000
Q ss_pred HhhhhCCcccHHHHHHHHHHHhhhhhhccccccchhhcCCCCCCcEEEEeeCCCCccChHHHHHHHHHc---CCCceEEE
Q 016885 182 VYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAY---AGDKNIIK 258 (381)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~---~~~~~~~~ 258 (381)
..-..+|.... ..+....+ ......++.-...+|++||--|+.|...+...+...+ ++..++.+
T Consensus 773 ERYMg~P~~nE---~gY~agSV----------~~~VeklpdepnRLlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~I 839 (867)
T KOG2281|consen 773 ERYMGYPDNNE---HGYGAGSV----------AGHVEKLPDEPNRLLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQI 839 (867)
T ss_pred hhhcCCCccch---hcccchhH----------HHHHhhCCCCCceEEEEecccccchhhhhHHHHHHHHHhCCCceEEEE
Confidence 00011221100 00000000 0011334444456899999999999998888888776 45678999
Q ss_pred eCC-CCCCCCh---hhHHHHHHHHHHh
Q 016885 259 FDG-DHNSSRP---QFYYDSVSIFFYN 281 (381)
Q Consensus 259 ~~g-gH~~~~~---~~~~~~i~~fl~~ 281 (381)
||. -|..-.+ ..+-..+..|+++
T Consensus 840 fP~ERHsiR~~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 840 FPNERHSIRNPESGIYYEARLLHFLQE 866 (867)
T ss_pred ccccccccCCCccchhHHHHHHHHHhh
Confidence 998 8885533 3455567777754
No 92
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.65 E-value=9.3e-15 Score=145.65 Aligned_cols=224 Identities=20% Similarity=0.250 Sum_probs=162.4
Q ss_pred CCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhc-----HHHHHHHhccCCcEEEEeCCCCCCCCCCC-----CcCCC
Q 016885 46 RGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD-----ANEAAVILLPSNITLFTLDFSGSGLSDGD-----YVSLG 115 (381)
Q Consensus 46 dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~-----~~~~~~~l~~~G~~vi~~D~~G~G~S~~~-----~~~~~ 115 (381)
+|....+.+.+|++....++.|+||.+||+.++... ..+....+...|+.|+.+|.||.|..... ....+
T Consensus 506 ~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG 585 (755)
T KOG2100|consen 506 DGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYGWDFRSALPRNLG 585 (755)
T ss_pred ccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcchhHHHHhhhhcC
Confidence 899999999999887777899999999999974322 22333356778999999999999776543 23345
Q ss_pred cchhhHHHHHHHHHHhcCCC--CcEEEEEEchhHHHHHHhhccCCC--ccEEEeccCccCHHHHHHHHHHHhhhhCCccc
Q 016885 116 WHEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS--IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFT 191 (381)
Q Consensus 116 ~~~~~d~~~~i~~l~~~~~~--~~i~l~G~S~GG~~a~~~a~~~p~--v~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (381)
..+++|...+++++.+..-. ++|+|+|+|+||++++.++..++. +++.+.++|..++. .............|...
T Consensus 586 ~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~-~yds~~terymg~p~~~ 664 (755)
T KOG2100|consen 586 DVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWL-YYDSTYTERYMGLPSEN 664 (755)
T ss_pred CcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeee-eecccccHhhcCCCccc
Confidence 56689999999999888743 899999999999999999999984 78889999998764 21111111001112111
Q ss_pred HHHHHHHHHHHhhhhhhccccccchhhcCCCCCCcE-EEEeeCCCCccChHHHHHHHHHcC---CCceEEEeCC-CCCCC
Q 016885 192 VKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPA-LFGHASEDKFIRARHSDLIFNAYA---GDKNIIKFDG-DHNSS 266 (381)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pv-lii~G~~D~~v~~~~~~~l~~~~~---~~~~~~~~~g-gH~~~ 266 (381)
... ..+......+..++.|. |++||+.|..|+.+++..+++++. -..++.++++ +|...
T Consensus 665 ~~~----------------y~e~~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is 728 (755)
T KOG2100|consen 665 DKG----------------YEESSVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGIS 728 (755)
T ss_pred cch----------------hhhccccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccc
Confidence 100 11223334555566666 999999999999999999998883 3467888887 99977
Q ss_pred Ch---hhHHHHHHHHHHhhcCCC
Q 016885 267 RP---QFYYDSVSIFFYNVLHPP 286 (381)
Q Consensus 267 ~~---~~~~~~i~~fl~~~l~~~ 286 (381)
.. ..+...+..||..++..+
T Consensus 729 ~~~~~~~~~~~~~~~~~~~~~~~ 751 (755)
T KOG2100|consen 729 YVEVISHLYEKLDRFLRDCFGSP 751 (755)
T ss_pred cccchHHHHHHHHHHHHHHcCcc
Confidence 43 577888999999776543
No 93
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.62 E-value=4.1e-14 Score=118.35 Aligned_cols=208 Identities=13% Similarity=0.121 Sum_probs=130.9
Q ss_pred CCCCcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchhhHHHHHHHHHHhcCC----CCcE
Q 016885 63 DTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQ----TSRI 138 (381)
Q Consensus 63 ~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~i~~l~~~~~----~~~i 138 (381)
....+.++++|-.||+...|..+...|.. .+.++++.+||+|..-+.+.. .|+.++++.+..... ..++
T Consensus 4 ~~~~~~L~cfP~AGGsa~~fr~W~~~lp~-~iel~avqlPGR~~r~~ep~~------~di~~Lad~la~el~~~~~d~P~ 76 (244)
T COG3208 4 PGARLRLFCFPHAGGSASLFRSWSRRLPA-DIELLAVQLPGRGDRFGEPLL------TDIESLADELANELLPPLLDAPF 76 (244)
T ss_pred CCCCceEEEecCCCCCHHHHHHHHhhCCc-hhheeeecCCCcccccCCccc------ccHHHHHHHHHHHhccccCCCCe
Confidence 45678899999999999999998887766 599999999999876544332 344444444443332 3789
Q ss_pred EEEEEchhHHHHHHhhccCCC----ccEEEeccCccCH------------HHHHHHHHHHhhhhCCcccHHHHHHHHHHH
Q 016885 139 GLWGRSMGAVTSLLYGAEDPS----IAGMVLDSAFSDL------------FDLMLELVDVYKIRLPKFTVKMAVQYMRRV 202 (381)
Q Consensus 139 ~l~G~S~GG~~a~~~a~~~p~----v~~vi~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (381)
.++||||||++|..+|.+..+ +.++.+.+..... .+++..+.+..+.....+.......++-..
T Consensus 77 alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~l~~lgG~p~e~led~El~~l~LPi 156 (244)
T COG3208 77 ALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHLDDADFLADLVDLGGTPPELLEDPELMALFLPI 156 (244)
T ss_pred eecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCCCHHHHHHHHHHhCCCChHHhcCHHHHHHHHHH
Confidence 999999999999999876432 5566554432210 112333333222111111112223333222
Q ss_pred hhhhhhccccccchhhcCCCCCCcEEEEeeCCCCccChHHHHHHHHHcCCCceEEEeCCCCCCCC--hhhHHHHHHHHH
Q 016885 203 IQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDGDHNSSR--PQFYYDSVSIFF 279 (381)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~ggH~~~~--~~~~~~~i~~fl 279 (381)
++.. +..........-..+.||+.++.|++|..+..+....+.+..++..++.+++|||++.. .+++...+.+.+
T Consensus 157 lRAD--~~~~e~Y~~~~~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~~f~l~~fdGgHFfl~~~~~~v~~~i~~~l 233 (244)
T COG3208 157 LRAD--FRALESYRYPPPAPLACPIHAFGGEKDHEVSRDELGAWREHTKGDFTLRVFDGGHFFLNQQREEVLARLEQHL 233 (244)
T ss_pred HHHH--HHHhcccccCCCCCcCcceEEeccCcchhccHHHHHHHHHhhcCCceEEEecCcceehhhhHHHHHHHHHHHh
Confidence 2221 11111011112256789999999999999999998888888888899999999999773 334444444444
No 94
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.60 E-value=1.8e-14 Score=118.16 Aligned_cols=234 Identities=16% Similarity=0.197 Sum_probs=148.4
Q ss_pred EEEEcCCCeEEEEEEeecCCCCCCCCCc-EEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcC---CC
Q 016885 40 LEIRNARGHVLQCSHYMPSPFPEDTPLP-CVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVS---LG 115 (381)
Q Consensus 40 v~~~~~dg~~l~~~~~~P~~~~~~~~~p-~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~---~~ 115 (381)
+.+...||..+.+.+|-. .++.+ .|++-.+.|-....+..++..++++||.|+++|+||.|.|...-.. ..
T Consensus 8 ~~l~~~DG~~l~~~~~pA-----~~~~~g~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~ 82 (281)
T COG4757 8 AHLPAPDGYSLPGQRFPA-----DGKASGRLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWR 82 (281)
T ss_pred cccccCCCccCccccccC-----CCCCCCcEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccccCccc
Confidence 567888999999988732 34444 6666666666677788999999999999999999999999754322 22
Q ss_pred cch--hhHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhhccCCCccEEEeccCccCHHHHHHH---------------
Q 016885 116 WHE--KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLE--------------- 178 (381)
Q Consensus 116 ~~~--~~d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~v~~vi~~~~~~~~~~~~~~--------------- 178 (381)
+.+ ..|+.++++++++..+.-+...+|||+||.+.-.+.. +++..+....+........+..
T Consensus 83 ~~DwA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~~-~~k~~a~~vfG~gagwsg~m~~~~~l~~~~l~~lv~p 161 (281)
T COG4757 83 YLDWARLDFPAALAALKKALPGHPLYFVGHSFGGQALGLLGQ-HPKYAAFAVFGSGAGWSGWMGLRERLGAVLLWNLVGP 161 (281)
T ss_pred hhhhhhcchHHHHHHHHhhCCCCceEEeeccccceeeccccc-CcccceeeEeccccccccchhhhhcccceeecccccc
Confidence 222 5789999999998777788999999999987765444 3442222221111111100000
Q ss_pred HHHHhh-------hhCC-cccHHHHHHHHHHHhhhhhhcccccc-chhhcCCCCCCcEEEEeeCCCCccChHHHHHHHHH
Q 016885 179 LVDVYK-------IRLP-KFTVKMAVQYMRRVIQKKAKFDIMDL-NCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNA 249 (381)
Q Consensus 179 ~~~~~~-------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~ 249 (381)
.+..+. ..++ ..+....++|.+........++.-.. +..+...++++|++++...+|+.+|+...+.+..-
T Consensus 162 ~lt~w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~fddp~~~~~~q~yaaVrtPi~~~~~~DD~w~P~As~d~f~~~ 241 (281)
T COG4757 162 PLTFWKGYMPKDLLGLGSDLPGTVMRDWARWCRHPRYYFDDPAMRNYRQVYAAVRTPITFSRALDDPWAPPASRDAFASF 241 (281)
T ss_pred chhhccccCcHhhcCCCccCcchHHHHHHHHhcCccccccChhHhHHHHHHHHhcCceeeeccCCCCcCCHHHHHHHHHh
Confidence 000011 1111 23334445554444333333332222 24466778899999999999999999999998888
Q ss_pred cCCC-ceEEEeC---C--CCCCC--Ch-hhHHHHHHHHH
Q 016885 250 YAGD-KNIIKFD---G--DHNSS--RP-QFYYDSVSIFF 279 (381)
Q Consensus 250 ~~~~-~~~~~~~---g--gH~~~--~~-~~~~~~i~~fl 279 (381)
+.+. -+...++ + ||+.. .+ +..+++++.|+
T Consensus 242 y~nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 242 YRNAPLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred hhcCcccceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 7553 2233332 2 89844 33 67777777776
No 95
>COG0400 Predicted esterase [General function prediction only]
Probab=99.59 E-value=8.4e-14 Score=116.61 Aligned_cols=177 Identities=24% Similarity=0.266 Sum_probs=123.3
Q ss_pred CCCCCcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCC--CCC-------CCCCcCCC-cchhhHHHHHHHHHHh
Q 016885 62 EDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGS--GLS-------DGDYVSLG-WHEKDDLKVVVSYLRG 131 (381)
Q Consensus 62 ~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~--G~S-------~~~~~~~~-~~~~~d~~~~i~~l~~ 131 (381)
.+...|+||++||.|++...+..+.+.+..+ +.++.+.-+-. |.- .+.+.... ......+.+.++.+.+
T Consensus 14 ~~p~~~~iilLHG~Ggde~~~~~~~~~~~P~-~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~ 92 (207)
T COG0400 14 GDPAAPLLILLHGLGGDELDLVPLPELILPN-ATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAE 92 (207)
T ss_pred CCCCCcEEEEEecCCCChhhhhhhhhhcCCC-CeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHH
Confidence 4567789999999999998888877777664 55554432211 100 01111000 0113445566666666
Q ss_pred cCCC--CcEEEEEEchhHHHHHHhhccCCC-ccEEEeccCccCHHHHHHHHHHHhhhhCCcccHHHHHHHHHHHhhhhhh
Q 016885 132 NKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAK 208 (381)
Q Consensus 132 ~~~~--~~i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (381)
..+. ++++++|+|.||.+++.+..++|. ++++++.+|...+...
T Consensus 93 ~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~--------------------------------- 139 (207)
T COG0400 93 EYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPE--------------------------------- 139 (207)
T ss_pred HhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCc---------------------------------
Confidence 6666 899999999999999999999998 8999998887543110
Q ss_pred ccccccchhhcCCCCCCcEEEEeeCCCCccChHHHHHHHHHc---CCCceEEEeCCCCCCCChhhHHHHHHHHHHhhc
Q 016885 209 FDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAY---AGDKNIIKFDGDHNSSRPQFYYDSVSIFFYNVL 283 (381)
Q Consensus 209 ~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~---~~~~~~~~~~ggH~~~~~~~~~~~i~~fl~~~l 283 (381)
.....-.+|++++||..|++||...+.++.+.+ +..+....+++||... .+..+.+.+|+.+.+
T Consensus 140 ---------~~~~~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~~GH~i~--~e~~~~~~~wl~~~~ 206 (207)
T COG0400 140 ---------LLPDLAGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHEGGHEIP--PEELEAARSWLANTL 206 (207)
T ss_pred ---------cccccCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEecCCCcCC--HHHHHHHHHHHHhcc
Confidence 001122489999999999999998888877766 4567888889999875 456777888987653
No 96
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.57 E-value=2.1e-13 Score=112.90 Aligned_cols=181 Identities=14% Similarity=0.177 Sum_probs=113.4
Q ss_pred EEEeCCCCCChhcHH--HHHHHhccCC--cEEEEeCCCCCCCCCCCCcCCCcchhhHHHHHHHHHHhcCCCCcEEEEEEc
Q 016885 69 VVYCHGNSGCRADAN--EAAVILLPSN--ITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRS 144 (381)
Q Consensus 69 vv~~HG~~~~~~~~~--~~~~~l~~~G--~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~i~l~G~S 144 (381)
|+++||+.++..+.. .+.+.+.+.+ ..+.++|++.+ ...+.+.+..+.+....+.+.|+|.|
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~~~--------------p~~a~~~l~~~i~~~~~~~~~liGSS 67 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLPPF--------------PEEAIAQLEQLIEELKPENVVLIGSS 67 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCCcC--------------HHHHHHHHHHHHHhCCCCCeEEEEEC
Confidence 799999998887654 3455666654 46677777621 13333444444444344569999999
Q ss_pred hhHHHHHHhhccCCCccEEEeccCccCHHHHHHHHHHHhhhhCCcccHHHHHHHHHHHhhhhhhccccccchhhcCCCCC
Q 016885 145 MGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTF 224 (381)
Q Consensus 145 ~GG~~a~~~a~~~p~v~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 224 (381)
|||+.|..+|.++. +++ |+++|...+...+.............-........+ .....+. .....-.
T Consensus 68 lGG~~A~~La~~~~-~~a-vLiNPav~p~~~l~~~iG~~~~~~~~e~~~~~~~~~----~~l~~l~-------~~~~~~~ 134 (187)
T PF05728_consen 68 LGGFYATYLAERYG-LPA-VLINPAVRPYELLQDYIGEQTNPYTGESYELTEEHI----EELKALE-------VPYPTNP 134 (187)
T ss_pred hHHHHHHHHHHHhC-CCE-EEEcCCCCHHHHHHHhhCccccCCCCccceechHhh----hhcceEe-------ccccCCC
Confidence 99999999998775 555 778999888777665444321111000000000000 0000000 0012234
Q ss_pred CcEEEEeeCCCCccChHHHHHHHHHcCCCceEEEeCCCCCCCChhhHHHHHHHHH
Q 016885 225 IPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDGDHNSSRPQFYYDSVSIFF 279 (381)
Q Consensus 225 ~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~ggH~~~~~~~~~~~i~~fl 279 (381)
.++++++++.|++++.+.+. +.+.+.+.++..+|+|.+..-+++...|.+|+
T Consensus 135 ~~~lvll~~~DEvLd~~~a~---~~~~~~~~~i~~ggdH~f~~f~~~l~~i~~f~ 186 (187)
T PF05728_consen 135 ERYLVLLQTGDEVLDYREAV---AKYRGCAQIIEEGGDHSFQDFEEYLPQIIAFL 186 (187)
T ss_pred ccEEEEEecCCcccCHHHHH---HHhcCceEEEEeCCCCCCccHHHHHHHHHHhh
Confidence 68999999999999986554 34445566777677999998889999999987
No 97
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.56 E-value=3.9e-13 Score=120.67 Aligned_cols=234 Identities=18% Similarity=0.198 Sum_probs=143.7
Q ss_pred EEEEEEcCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCC---C--hhcHHHHHHHhcc-CCcEEEEeCCCCCCCCCCCC
Q 016885 38 QDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSG---C--RADANEAAVILLP-SNITLFTLDFSGSGLSDGDY 111 (381)
Q Consensus 38 ~~v~~~~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~---~--~~~~~~~~~~l~~-~G~~vi~~D~~G~G~S~~~~ 111 (381)
.++++. ....+..++|.|.........|+|||+||+|. + ...+..+...++. .+..|+.+||| ..+..+
T Consensus 64 ~dv~~~--~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYR---LAPEh~ 138 (336)
T KOG1515|consen 64 KDVTID--PFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYR---LAPEHP 138 (336)
T ss_pred eeeEec--CCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcc---cCCCCC
Confidence 354444 45567777999986544468899999999993 2 3446677777644 58999999999 555555
Q ss_pred cCCCcchhhHHHHHHHHHHhc------CCCCcEEEEEEchhHHHHHHhhccC-------CCccEEEeccCccCHHHHHHH
Q 016885 112 VSLGWHEKDDLKVVVSYLRGN------KQTSRIGLWGRSMGAVTSLLYGAED-------PSIAGMVLDSAFSDLFDLMLE 178 (381)
Q Consensus 112 ~~~~~~~~~d~~~~i~~l~~~------~~~~~i~l~G~S~GG~~a~~~a~~~-------p~v~~vi~~~~~~~~~~~~~~ 178 (381)
.+..+ +|...++.|+.++ .+.++|+|+|-|.||.+|..+|.+. +.+++.|++.|+.........
T Consensus 139 ~Pa~y---~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~~~ 215 (336)
T KOG1515|consen 139 FPAAY---DDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRTES 215 (336)
T ss_pred CCccc---hHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCCCH
Confidence 55443 6777777777764 3448999999999999998776542 349999999998865443322
Q ss_pred HHHHhhhhCCcccHHHHHHHHHHHhhhhh-hccccccchhh-----cCCCCCC-cEEEEeeCCCCccChHHHHHHHHHc-
Q 016885 179 LVDVYKIRLPKFTVKMAVQYMRRVIQKKA-KFDIMDLNCLK-----LAPKTFI-PALFGHASEDKFIRARHSDLIFNAY- 250 (381)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-----~~~~i~~-Pvlii~G~~D~~v~~~~~~~l~~~~- 250 (381)
-.+......+.........++........ ..+.--.++.. ......+ |+|++.++.|.+. ......++++
T Consensus 216 e~~~~~~~~~~~~~~~~~~~w~~~lP~~~~~~~~p~~np~~~~~~~d~~~~~lp~tlv~~ag~D~L~--D~~~~Y~~~Lk 293 (336)
T KOG1515|consen 216 EKQQNLNGSPELARPKIDKWWRLLLPNGKTDLDHPFINPVGNSLAKDLSGLGLPPTLVVVAGYDVLR--DEGLAYAEKLK 293 (336)
T ss_pred HHHHhhcCCcchhHHHHHHHHHHhCCCCCCCcCCccccccccccccCccccCCCceEEEEeCchhhh--hhhHHHHHHHH
Confidence 22211111222222233333332222222 11111112211 1222334 5999999999887 4555556655
Q ss_pred --CCCceEEEeCC-CCCCC-------ChhhHHHHHHHHHHh
Q 016885 251 --AGDKNIIKFDG-DHNSS-------RPQFYYDSVSIFFYN 281 (381)
Q Consensus 251 --~~~~~~~~~~g-gH~~~-------~~~~~~~~i~~fl~~ 281 (381)
+...++..+++ .|.+. ...+..+.+.+|+.+
T Consensus 294 k~Gv~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~ 334 (336)
T KOG1515|consen 294 KAGVEVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKS 334 (336)
T ss_pred HcCCeEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhh
Confidence 33445556665 78733 234667777788765
No 98
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.55 E-value=3.6e-13 Score=122.71 Aligned_cols=226 Identities=16% Similarity=0.177 Sum_probs=137.8
Q ss_pred EcCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCC---CChhcH-HHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcch
Q 016885 43 RNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNS---GCRADA-NEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE 118 (381)
Q Consensus 43 ~~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~---~~~~~~-~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~ 118 (381)
....+..+.+.+|.| ........|+||++||++ ++.... ..+...+...|+.|+.+|||-. +..... ..
T Consensus 57 ~~~~~~~~~~~~y~p-~~~~~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrla---Pe~~~p---~~ 129 (312)
T COG0657 57 AGPSGDGVPVRVYRP-DRKAAATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLA---PEHPFP---AA 129 (312)
T ss_pred cCCCCCceeEEEECC-CCCCCCCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCC---CCCCCC---ch
Confidence 344555577889998 222445789999999998 444444 4455566678999999999943 222221 33
Q ss_pred hhHHHHHHHHHHhcCC-----CCcEEEEEEchhHHHHHHhhccCC-----CccEEEeccCccCHHHHHHHHHHHhhhhCC
Q 016885 119 KDDLKVVVSYLRGNKQ-----TSRIGLWGRSMGAVTSLLYGAEDP-----SIAGMVLDSAFSDLFDLMLELVDVYKIRLP 188 (381)
Q Consensus 119 ~~d~~~~i~~l~~~~~-----~~~i~l~G~S~GG~~a~~~a~~~p-----~v~~vi~~~~~~~~~~~~~~~~~~~~~~~~ 188 (381)
++|+.+++.|+.++.. .++|+++|+|.||.+++.++.... ...+.++++|..+... .......+. ...
T Consensus 130 ~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~-~~~~~~~~~-~~~ 207 (312)
T COG0657 130 LEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTS-SAASLPGYG-EAD 207 (312)
T ss_pred HHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcc-cccchhhcC-Ccc
Confidence 6899999999998742 489999999999999998876533 4789999999887654 111111111 111
Q ss_pred cccHHHHH-HHHHHHhhhhhhccccccchh--hcCCCCCCcEEEEeeCCCCccChHHHHHHHHHc---CCCceEEEeCC-
Q 016885 189 KFTVKMAV-QYMRRVIQKKAKFDIMDLNCL--KLAPKTFIPALFGHASEDKFIRARHSDLIFNAY---AGDKNIIKFDG- 261 (381)
Q Consensus 189 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~---~~~~~~~~~~g- 261 (381)
.+...... .+.............-...+. ..+.. -.|+++++|+.|.+.+ ++..+.+++ +...++..+++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~p~~spl~~~~~~~-lPP~~i~~a~~D~l~~--~~~~~a~~L~~agv~~~~~~~~g~ 284 (312)
T COG0657 208 LLDAAAILAWFADLYLGAAPDREDPEASPLASDDLSG-LPPTLIQTAEFDPLRD--EGEAYAERLRAAGVPVELRVYPGM 284 (312)
T ss_pred ccCHHHHHHHHHHHhCcCccccCCCccCccccccccC-CCCEEEEecCCCcchh--HHHHHHHHHHHcCCeEEEEEeCCc
Confidence 12222222 222222221111110011111 11233 4689999999999997 566666666 44568888898
Q ss_pred CCCCC--C---hhhHHHHHHHHHH
Q 016885 262 DHNSS--R---PQFYYDSVSIFFY 280 (381)
Q Consensus 262 gH~~~--~---~~~~~~~i~~fl~ 280 (381)
.|.+. . .......+.+|+.
T Consensus 285 ~H~f~~~~~~~a~~~~~~~~~~l~ 308 (312)
T COG0657 285 IHGFDLLTGPEARSALRQIAAFLR 308 (312)
T ss_pred ceeccccCcHHHHHHHHHHHHHHH
Confidence 88763 2 1223345555554
No 99
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.54 E-value=1.1e-13 Score=118.74 Aligned_cols=188 Identities=21% Similarity=0.194 Sum_probs=113.7
Q ss_pred EEEeCCCC---CChhcHHHHHHHhcc-CCcEEEEeCCCCCCCCCCCCcCCCcchhhHHHHHHHHHHhc-----CCCCcEE
Q 016885 69 VVYCHGNS---GCRADANEAAVILLP-SNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGN-----KQTSRIG 139 (381)
Q Consensus 69 vv~~HG~~---~~~~~~~~~~~~l~~-~G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~i~~l~~~-----~~~~~i~ 139 (381)
||++||++ ++......++..+++ .|+.|+.+|||=. +... ....++|+.++++|+.++ .+.++|+
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~---p~~~---~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~ 74 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLA---PEAP---FPAALEDVKAAYRWLLKNADKLGIDPERIV 74 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---T---TTSS---TTHHHHHHHHHHHHHHHTHHHHTEEEEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeecccc---cccc---ccccccccccceeeeccccccccccccceE
Confidence 79999998 444555667777775 8999999999943 2111 124479999999999998 4458999
Q ss_pred EEEEchhHHHHHHhhccC-----CCccEEEeccCccCH-HHHHHHHHHHhh-hhCCcccHHHHHHHHHHHhhhhhhcccc
Q 016885 140 LWGRSMGAVTSLLYGAED-----PSIAGMVLDSAFSDL-FDLMLELVDVYK-IRLPKFTVKMAVQYMRRVIQKKAKFDIM 212 (381)
Q Consensus 140 l~G~S~GG~~a~~~a~~~-----p~v~~vi~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (381)
|+|+|.||.+++.++... +.++++++++|..++ ............ ...+.+.......+...... ....+..
T Consensus 75 l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 153 (211)
T PF07859_consen 75 LIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDLQDFDGPSYDDSNENKDDPFLPAPKIDWFWKLYLP-GSDRDDP 153 (211)
T ss_dssp EEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSSTSTSSCHHHHHHHHHSTTSSSBHHHHHHHHHHHHS-TGGTTST
T ss_pred Eeecccccchhhhhhhhhhhhcccchhhhhcccccccchhcccccccccccccccccccccccccccccccc-ccccccc
Confidence 999999999999888742 238999999998766 110011110000 11222333333333333222 1111111
Q ss_pred ccchhhc-CCCCCCcEEEEeeCCCCccChHHHHHHHHHc---CCCceEEEeCC-CCCC
Q 016885 213 DLNCLKL-APKTFIPALFGHASEDKFIRARHSDLIFNAY---AGDKNIIKFDG-DHNS 265 (381)
Q Consensus 213 ~~~~~~~-~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~---~~~~~~~~~~g-gH~~ 265 (381)
..++... -.+--.|+++++|+.|.++ .++..+++++ +.+.+++++++ +|.+
T Consensus 154 ~~sp~~~~~~~~~Pp~~i~~g~~D~l~--~~~~~~~~~L~~~gv~v~~~~~~g~~H~f 209 (211)
T PF07859_consen 154 LASPLNASDLKGLPPTLIIHGEDDVLV--DDSLRFAEKLKKAGVDVELHVYPGMPHGF 209 (211)
T ss_dssp TTSGGGSSCCTTCHEEEEEEETTSTTH--HHHHHHHHHHHHTT-EEEEEEETTEETTG
T ss_pred ccccccccccccCCCeeeeccccccch--HHHHHHHHHHHHCCCCEEEEEECCCeEEe
Confidence 1222222 1112359999999999876 4667777777 34568888998 8864
No 100
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=99.52 E-value=1.3e-14 Score=128.66 Aligned_cols=222 Identities=18% Similarity=0.168 Sum_probs=138.1
Q ss_pred eEEEEEEcC-CCeEEEEEEeecCCCCC---CCCCcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCC--CCCCCC
Q 016885 37 RQDLEIRNA-RGHVLQCSHYMPSPFPE---DTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGS--GLSDGD 110 (381)
Q Consensus 37 ~~~v~~~~~-dg~~l~~~~~~P~~~~~---~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~--G~S~~~ 110 (381)
...+++... ++.++...+|.|....+ ....|+||+.||.|+....+.++++.|++.||.|.+++++|. |..+..
T Consensus 38 ~~~i~~~~~~r~~~~~v~~~~p~~~~~~~~~~~~PlvvlshG~Gs~~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~ 117 (365)
T COG4188 38 FVTITLNDPQRDRERPVDLRLPQGGTGTVALYLLPLVVLSHGSGSYVTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAA 117 (365)
T ss_pred EEEEeccCcccCCccccceeccCCCccccccCcCCeEEecCCCCCCccchhhhHHHHhhCceEEEeccCCCcccccCChh
Confidence 445555544 37788888999975321 137899999999999999999999999999999999999995 443322
Q ss_pred CcC-------CCcchhhHHHHHHHHHHhc---C------CCCcEEEEEEchhHHHHHHhhccCCCccEEEeccC------
Q 016885 111 YVS-------LGWHEKDDLKVVVSYLRGN---K------QTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSA------ 168 (381)
Q Consensus 111 ~~~-------~~~~~~~d~~~~i~~l~~~---~------~~~~i~l~G~S~GG~~a~~~a~~~p~v~~vi~~~~------ 168 (381)
... ..|....|+..++++|.+. + +..+|+++|||+||++++.++....+...+.-.|.
T Consensus 118 ~~~~~~~~p~~~~erp~dis~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~~~~~~~~C~~~~~~~ 197 (365)
T COG4188 118 YAGPGSYAPAEWWERPLDISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELDAEALLQHCESASRIC 197 (365)
T ss_pred hcCCcccchhhhhcccccHHHHHHHHHHhhcCcccccccCccceEEEecccccHHHHHhccccccHHHHHHHhhhhhhcc
Confidence 111 2245588999999999887 3 22799999999999999999887654211111111
Q ss_pred ----ccCHHHHHHHHHHHhhhhCCcccHHHHHHHHHHHhhhhhhccccc--cchhhcCCCCCCcEEEEeeCCCCccChH-
Q 016885 169 ----FSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMD--LNCLKLAPKTFIPALFGHASEDKFIRAR- 241 (381)
Q Consensus 169 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~Pvlii~G~~D~~v~~~- 241 (381)
..+..... .......+ ....++-+..++......... .--...+.++++|++++.|..|.+.|+.
T Consensus 198 ~~~~~~~~~~l~----q~~av~~~----~~~~~~rDpriravvA~~p~~~~~Fg~tgl~~v~~P~~~~a~s~D~~aP~~~ 269 (365)
T COG4188 198 LDPPGLNGRLLN----QCAAVWLP----RQAYDLRDPRIRAVVAINPALGMIFGTTGLVKVTDPVLLAAGSADGFAPPVT 269 (365)
T ss_pred cCCCCcChhhhc----cccccccc----hhhhccccccceeeeeccCCcccccccccceeeecceeeecccccccCCccc
Confidence 01111100 00000111 000011111111100000000 0012456788999999999999988776
Q ss_pred HHHHHHHHcCCC-ceEEEeCC-CCCCC
Q 016885 242 HSDLIFNAYAGD-KNIIKFDG-DHNSS 266 (381)
Q Consensus 242 ~~~~l~~~~~~~-~~~~~~~g-gH~~~ 266 (381)
.....+..+++. +.+.+.++ .|...
T Consensus 270 ~~~~~f~~l~g~~k~~~~vp~a~h~sf 296 (365)
T COG4188 270 EQIRPFGYLPGALKYLRLVPGATHFSF 296 (365)
T ss_pred ccccccccCCcchhheeecCCCccccc
Confidence 566667777665 55666666 88843
No 101
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.52 E-value=2.2e-13 Score=111.59 Aligned_cols=173 Identities=18% Similarity=0.166 Sum_probs=126.4
Q ss_pred cEEEEeCCCCCChhc-HHHHHHHhccCCcEEEEeCCCCC-CCCCC-CCcC-------CCcc-hhhHHHHHHHHHHhcCCC
Q 016885 67 PCVVYCHGNSGCRAD-ANEAAVILLPSNITLFTLDFSGS-GLSDG-DYVS-------LGWH-EKDDLKVVVSYLRGNKQT 135 (381)
Q Consensus 67 p~vv~~HG~~~~~~~-~~~~~~~l~~~G~~vi~~D~~G~-G~S~~-~~~~-------~~~~-~~~d~~~~i~~l~~~~~~ 135 (381)
.+||++.-.-|.... .+..+..++..||.|++||+-.- -.+.. .... .++. ...++..+++|++.+...
T Consensus 40 ~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g~~ 119 (242)
T KOG3043|consen 40 KVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHGDS 119 (242)
T ss_pred eEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcCCc
Confidence 466666665554444 67889999999999999997532 11111 1000 0111 157899999999987667
Q ss_pred CcEEEEEEchhHHHHHHhhccCCCccEEEeccCccCHHHHHHHHHHHhhhhCCcccHHHHHHHHHHHhhhhhhccccccc
Q 016885 136 SRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLN 215 (381)
Q Consensus 136 ~~i~l~G~S~GG~~a~~~a~~~p~v~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (381)
.+|+++|++|||-++..+....+.+.+++...|...-
T Consensus 120 kkIGv~GfCwGak~vv~~~~~~~~f~a~v~~hps~~d------------------------------------------- 156 (242)
T KOG3043|consen 120 KKIGVVGFCWGAKVVVTLSAKDPEFDAGVSFHPSFVD------------------------------------------- 156 (242)
T ss_pred ceeeEEEEeecceEEEEeeccchhheeeeEecCCcCC-------------------------------------------
Confidence 9999999999999999999998888777766554210
Q ss_pred hhhcCCCCCCcEEEEeeCCCCccChHHHHHHHHHcCCC----ceEEEeCC-CCCCCC-------------hhhHHHHHHH
Q 016885 216 CLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGD----KNIIKFDG-DHNSSR-------------PQFYYDSVSI 277 (381)
Q Consensus 216 ~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~----~~~~~~~g-gH~~~~-------------~~~~~~~i~~ 277 (381)
...+..+++|+|++.|+.|.++|++....+-+.+... .++.+|+| +|.+.. .++..+.++.
T Consensus 157 -~~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~ 235 (242)
T KOG3043|consen 157 -SADIANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFIS 235 (242)
T ss_pred -hhHHhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHH
Confidence 1334467799999999999999999988888888543 25888998 887551 2567777888
Q ss_pred HHHhhc
Q 016885 278 FFYNVL 283 (381)
Q Consensus 278 fl~~~l 283 (381)
||++++
T Consensus 236 Wf~~y~ 241 (242)
T KOG3043|consen 236 WFKHYL 241 (242)
T ss_pred HHHHhh
Confidence 998775
No 102
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.52 E-value=4.3e-13 Score=126.69 Aligned_cols=208 Identities=12% Similarity=0.068 Sum_probs=135.6
Q ss_pred EEEEEeecCCCCCCCCCcEEEEeCCCCCChhcH-----HHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcch-hhHHH
Q 016885 50 LQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADA-----NEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE-KDDLK 123 (381)
Q Consensus 50 l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~-----~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~-~~d~~ 123 (381)
+....|.|.. +......||+++++-.....+ ..++++|.++||.|+++|+++-+..... .++.+ ++.+.
T Consensus 201 ~eLiqY~P~t--e~v~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~r~---~~ldDYv~~i~ 275 (560)
T TIGR01839 201 LELIQYKPIT--EQQHARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAHRE---WGLSTYVDALK 275 (560)
T ss_pred eEEEEeCCCC--CCcCCCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhhcC---CCHHHHHHHHH
Confidence 4445677752 235567888888886433222 5789999999999999999987665433 22222 56888
Q ss_pred HHHHHHHhcCCCCcEEEEEEchhHHHHHH----hhccCCC--ccEEEeccCccCHHH------H-----H---HHHHHHh
Q 016885 124 VVVSYLRGNKQTSRIGLWGRSMGAVTSLL----YGAEDPS--IAGMVLDSAFSDLFD------L-----M---LELVDVY 183 (381)
Q Consensus 124 ~~i~~l~~~~~~~~i~l~G~S~GG~~a~~----~a~~~p~--v~~vi~~~~~~~~~~------~-----~---~~~~~~~ 183 (381)
++++.+++..+.++|.++|+||||.+++. +++++++ |+.++++....++.. . + .......
T Consensus 276 ~Ald~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~~~g~l~~f~~e~~~~~~e~~~~~~ 355 (560)
T TIGR01839 276 EAVDAVRAITGSRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDSTMESPAALFADEQTLEAAKRRSYQA 355 (560)
T ss_pred HHHHHHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccCCCCcchhccChHHHHHHHHHHHhc
Confidence 99999999888899999999999999986 7777763 999998776554321 0 0 0000000
Q ss_pred hhhCC--------------------------------------------cccHHHHHHHHHHHhhhhhhcccccc---ch
Q 016885 184 KIRLP--------------------------------------------KFTVKMAVQYMRRVIQKKAKFDIMDL---NC 216 (381)
Q Consensus 184 ~~~~~--------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 216 (381)
+ .+| .++.....+++. +...........+ ..
T Consensus 356 G-~lpg~~ma~~F~~LrP~dliw~y~v~~yllg~~p~~fdll~Wn~D~t~lPg~~~~e~l~-ly~~N~L~~pG~l~v~G~ 433 (560)
T TIGR01839 356 G-VLDGSEMAKVFAWMRPNDLIWNYWVNNYLLGNEPPAFDILYWNNDTTRLPAAFHGDLLD-MFKSNPLTRPDALEVCGT 433 (560)
T ss_pred C-CcCHHHHHHHHHhcCchhhhHHHHHHHhhcCCCcchhhHHHHhCcCccchHHHHHHHHH-HHhcCCCCCCCCEEECCE
Confidence 0 001 111111111111 1100000000000 11
Q ss_pred hhcCCCCCCcEEEEeeCCCCccChHHHHHHHHHcCCCceEEEeCCCCC
Q 016885 217 LKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDGDHN 264 (381)
Q Consensus 217 ~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~ggH~ 264 (381)
.-.+.+|+||+|++.|..|.++|++.+..+.+.++.+++++..++||.
T Consensus 434 ~idL~~I~~Pvl~va~~~DHIvPw~s~~~~~~l~gs~~~fvl~~gGHI 481 (560)
T TIGR01839 434 PIDLKKVKCDSFSVAGTNDHITPWDAVYRSALLLGGKRRFVLSNSGHI 481 (560)
T ss_pred EechhcCCCCeEEEecCcCCcCCHHHHHHHHHHcCCCeEEEecCCCcc
Confidence 124678999999999999999999999999999988889999999998
No 103
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.50 E-value=1.2e-12 Score=112.35 Aligned_cols=175 Identities=15% Similarity=0.125 Sum_probs=122.8
Q ss_pred EEEeecCCCCCCCCCcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchhhHHHHHHHHHHh
Q 016885 52 CSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRG 131 (381)
Q Consensus 52 ~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~i~~l~~ 131 (381)
..++.|. ..+..|+|||+||+.-....|..+.+.++++||.|+++|+...+... ...+.+++.++++|+.+
T Consensus 6 l~v~~P~---~~g~yPVv~f~~G~~~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~~------~~~~~~~~~~vi~Wl~~ 76 (259)
T PF12740_consen 6 LLVYYPS---SAGTYPVVLFLHGFLLINSWYSQLLEHVASHGYIVVAPDLYSIGGPD------DTDEVASAAEVIDWLAK 76 (259)
T ss_pred eEEEecC---CCCCcCEEEEeCCcCCCHHHHHHHHHHHHhCceEEEEecccccCCCC------cchhHHHHHHHHHHHHh
Confidence 3467886 46789999999999977777889999999999999999976533211 11346888999999877
Q ss_pred cC----------CCCcEEEEEEchhHHHHHHhhccC-----C-CccEEEeccCccCHHHHHHHHHHHhhhhCCcccHHHH
Q 016885 132 NK----------QTSRIGLWGRSMGAVTSLLYGAED-----P-SIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMA 195 (381)
Q Consensus 132 ~~----------~~~~i~l~G~S~GG~~a~~~a~~~-----p-~v~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (381)
.. +..+++|.|||.||-++..++..+ . ++++++++.|....... ....|..
T Consensus 77 ~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG~~~~--------~~~~P~v----- 143 (259)
T PF12740_consen 77 GLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDGMSKG--------SQTEPPV----- 143 (259)
T ss_pred cchhhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccccccccc--------cCCCCcc-----
Confidence 42 237999999999999999888876 2 39999999998632210 0001110
Q ss_pred HHHHHHHhhhhhhccccccchhhcCCCCCCcEEEEeeCCCC---------ccChH-HHHHHHHHcCCCceEEEeCC-CCC
Q 016885 196 VQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDK---------FIRAR-HSDLIFNAYAGDKNIIKFDG-DHN 264 (381)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~---------~v~~~-~~~~l~~~~~~~~~~~~~~g-gH~ 264 (381)
.......-+..+|+++|..+-+. ..|.. .-+++++.+......++..+ ||.
T Consensus 144 ------------------~~~~p~s~~~~~P~lviGtGLg~~~~~~~~~~CaP~g~n~~~Ff~~~~~p~~~~v~~~~GH~ 205 (259)
T PF12740_consen 144 ------------------LTYTPQSFDFSMPALVIGTGLGGEPRNPLFPPCAPAGVNYREFFDECKPPSWHFVAKDYGHM 205 (259)
T ss_pred ------------------ccCcccccCCCCCeEEEecccCcccccccCCCCCCCCCCHHHHHHhcCCCEEEEEeCCCCch
Confidence 00011222345999999888774 34443 67788888877655555665 998
Q ss_pred CC
Q 016885 265 SS 266 (381)
Q Consensus 265 ~~ 266 (381)
..
T Consensus 206 d~ 207 (259)
T PF12740_consen 206 DF 207 (259)
T ss_pred Hh
Confidence 43
No 104
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.50 E-value=1e-12 Score=111.27 Aligned_cols=181 Identities=17% Similarity=0.165 Sum_probs=112.4
Q ss_pred EEEEEeecCCCCCCCCCcEEEEeCCCCCChhcHHHH--HHHhcc-CCcEEEEeCCCCCCCCCCC------CcCCCcchhh
Q 016885 50 LQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEA--AVILLP-SNITLFTLDFSGSGLSDGD------YVSLGWHEKD 120 (381)
Q Consensus 50 l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~--~~~l~~-~G~~vi~~D~~G~G~S~~~------~~~~~~~~~~ 120 (381)
|.|.+|+|++.+ .++.|+||++||.+++...+... ...+++ +||.|+.++........+. ....+..+..
T Consensus 1 l~Y~lYvP~~~~-~~~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~ 79 (220)
T PF10503_consen 1 LSYRLYVPPGAP-RGPVPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVA 79 (220)
T ss_pred CcEEEecCCCCC-CCCCCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchh
Confidence 467899998543 34689999999999998776432 234554 5999999986532211111 1111223456
Q ss_pred HHHHHHHHHHhcCCC--CcEEEEEEchhHHHHHHhhccCCC-ccEEEeccCccCHH--HHHHHHHHHhhhhCCcccHHHH
Q 016885 121 DLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLF--DLMLELVDVYKIRLPKFTVKMA 195 (381)
Q Consensus 121 d~~~~i~~l~~~~~~--~~i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 195 (381)
.+.++++++..+..+ +||.+.|+|.||+++..++..+|+ +.++...++..... ..... ...........+ ...
T Consensus 80 ~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~~~a~~~~~a-~~~m~~g~~~~p-~~~ 157 (220)
T PF10503_consen 80 FIAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPYGCAASGASA-LSAMRSGPRPAP-AAA 157 (220)
T ss_pred hHHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccccccccCcccH-HHHhhCCCCCCh-HHH
Confidence 788889999888765 799999999999999999999999 78877766543211 00000 000000000000 000
Q ss_pred HHHHHHHhhhhhhccccccchhhcCCCCCCcEEEEeeCCCCccChHHHHHHHHHc
Q 016885 196 VQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAY 250 (381)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~ 250 (381)
. .... .....+ ..|++++||..|..|.+....++.+.+
T Consensus 158 ~---~a~~------------~~g~~~--~~P~~v~hG~~D~tV~~~n~~~~~~q~ 195 (220)
T PF10503_consen 158 W---GARS------------DAGAYP--GYPRIVFHGTADTTVNPQNADQLVAQW 195 (220)
T ss_pred H---Hhhh------------hccCCC--CCCEEEEecCCCCccCcchHHHHHHHH
Confidence 0 0000 000111 259999999999999998888877765
No 105
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.50 E-value=1.8e-12 Score=118.85 Aligned_cols=133 Identities=20% Similarity=0.362 Sum_probs=108.0
Q ss_pred ceeeEEEEEEcCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhcHH------HHHHHhccCCcEEEEeCCCCCCCC
Q 016885 34 SYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADAN------EAAVILLPSNITLFTLDFSGSGLS 107 (381)
Q Consensus 34 ~~~~~~v~~~~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~------~~~~~l~~~G~~vi~~D~~G~G~S 107 (381)
.|.-|+..+.+.||..|. ..-.|.. .+++|+|++.||+-.++..|. .++-.|+++||.|..-+.||...|
T Consensus 45 gy~~E~h~V~T~DgYiL~-lhRIp~~---~~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~yS 120 (403)
T KOG2624|consen 45 GYPVEEHEVTTEDGYILT-LHRIPRG---KKKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYS 120 (403)
T ss_pred CCceEEEEEEccCCeEEE-EeeecCC---CCCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccc
Confidence 345557778899999555 4556653 288999999999998888773 567789999999999999997555
Q ss_pred C----------CCCcCCCcch--hhHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhhccCCC----ccEEEeccCcc
Q 016885 108 D----------GDYVSLGWHE--KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS----IAGMVLDSAFS 170 (381)
Q Consensus 108 ~----------~~~~~~~~~~--~~d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~----v~~vi~~~~~~ 170 (381)
. .++..++|++ ..|+.++|+++.+..+.+++..+|||.|+.+...++..+|+ |+..++++|..
T Consensus 121 r~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~ 199 (403)
T KOG2624|consen 121 RKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAA 199 (403)
T ss_pred hhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchh
Confidence 3 2244455665 68999999999999888999999999999999999998875 88999988877
No 106
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.50 E-value=3.1e-12 Score=112.31 Aligned_cols=209 Identities=19% Similarity=0.255 Sum_probs=120.1
Q ss_pred CcEEEEeCCCCCChhcHHHHHHHhccC--CcEEEEeCCCCCCCCCCCCcCCCcchhhHHHHHHHHHHhcCCCCcEEEEEE
Q 016885 66 LPCVVYCHGNSGCRADANEAAVILLPS--NITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGR 143 (381)
Q Consensus 66 ~p~vv~~HG~~~~~~~~~~~~~~l~~~--G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~i~l~G~ 143 (381)
.|.|+++||++++...|......+... .|.|+.+|+||||.|. .. . .........+..+.+..+..++.++||
T Consensus 21 ~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~~---~-~~~~~~~~~~~~~~~~~~~~~~~l~G~ 95 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSD-PA---G-YSLSAYADDLAALLDALGLEKVVLVGH 95 (282)
T ss_pred CCeEEEeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCCC-cc---c-ccHHHHHHHHHHHHHHhCCCceEEEEe
Confidence 569999999999888887733333332 1999999999999997 11 0 111112333333333446667999999
Q ss_pred chhHHHHHHhhccCCC-ccEEEeccCccC-----------HH-HHHHHHHHHhhhh-----------C---Cccc-----
Q 016885 144 SMGAVTSLLYGAEDPS-IAGMVLDSAFSD-----------LF-DLMLELVDVYKIR-----------L---PKFT----- 191 (381)
Q Consensus 144 S~GG~~a~~~a~~~p~-v~~vi~~~~~~~-----------~~-~~~~~~~~~~~~~-----------~---~~~~----- 191 (381)
|+||.+++.++.++|+ +++++++++... .. ............. . ....
T Consensus 96 S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (282)
T COG0596 96 SMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLGLDAAAFAALLAALGLLAALAAAARA 175 (282)
T ss_pred cccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccchhhhhhhhhccchhhhhhhhhcccccccccccchh
Confidence 9999999999999998 999999886543 00 0000000000000 0 0000
Q ss_pred --H---H-HHHHHHHHHhhhhhh--cc-----ccccchhhcCCCCCCcEEEEeeCCCCccChHHHHHHHHHcCCCceEEE
Q 016885 192 --V---K-MAVQYMRRVIQKKAK--FD-----IMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIK 258 (381)
Q Consensus 192 --~---~-~~~~~~~~~~~~~~~--~~-----~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~ 258 (381)
. . ............... .. ............+++|+++++|.+|.+.+......+.+.++....+++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~d~~~~~~~~~~~~~~~~~~~~~~~ 255 (282)
T COG0596 176 GLAEALRAPLLGAAAAAFARAARADLAAALLALLDRDLRAALARITVPTLIIHGEDDPVVPAELARRLAAALPNDARLVV 255 (282)
T ss_pred ccccccccccchhHhhhhhhhcccccchhhhcccccccchhhccCCCCeEEEecCCCCcCCHHHHHHHHhhCCCCceEEE
Confidence 0 0 000000000000000 00 000012234566789999999999977776665666666654346777
Q ss_pred eCC-CCCCC--ChhhHHHHHHHHH
Q 016885 259 FDG-DHNSS--RPQFYYDSVSIFF 279 (381)
Q Consensus 259 ~~g-gH~~~--~~~~~~~~i~~fl 279 (381)
+++ ||... .++.+.+.+.+|+
T Consensus 256 ~~~~gH~~~~~~p~~~~~~i~~~~ 279 (282)
T COG0596 256 IPGAGHFPHLEAPEAFAAALLAFL 279 (282)
T ss_pred eCCCCCcchhhcHHHHHHHHHHHH
Confidence 776 99855 6677777776643
No 107
>COG4099 Predicted peptidase [General function prediction only]
Probab=99.47 E-value=8e-13 Score=112.40 Aligned_cols=216 Identities=17% Similarity=0.245 Sum_probs=129.9
Q ss_pred CCCCccccccccccccCcceeeEEEEEEcCCCeEEEEEEeecCCCCCCCCC-cEEEEeCCCCCChhcH-HHHH-------
Q 016885 16 EYNPDQYLWERDFMLAGRSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPL-PCVVYCHGNSGCRADA-NEAA------- 86 (381)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dg~~l~~~~~~P~~~~~~~~~-p~vv~~HG~~~~~~~~-~~~~------- 86 (381)
.+++.+......+.+.+ +...++ +...-|.+|.+.+|.|+....+++. |+|||+||.|.....- ..+.
T Consensus 143 p~~~Ka~~~~enla~dd--F~a~~f-~d~~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaia 219 (387)
T COG4099 143 PFDPKAANYAENLALDD--FQAVEF-YDESTGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIA 219 (387)
T ss_pred CCCccccchhhceeeec--hhheEe-eccccCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhhhhcCcccee
Confidence 45555543333333333 443333 3446789999999999876555555 9999999999655432 2221
Q ss_pred HHhccCCcEEEEeCCCC-CCCCCCCCcCCCcchhhHHHHHH-HHHHhcCCC--CcEEEEEEchhHHHHHHhhccCCC-cc
Q 016885 87 VILLPSNITLFTLDFSG-SGLSDGDYVSLGWHEKDDLKVVV-SYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IA 161 (381)
Q Consensus 87 ~~l~~~G~~vi~~D~~G-~G~S~~~~~~~~~~~~~d~~~~i-~~l~~~~~~--~~i~l~G~S~GG~~a~~~a~~~p~-v~ 161 (381)
...-+.++-|+++.+-- +-.++.... .......+++ +-+.+++++ .||.++|.|+||+.++.++.++|+ ++
T Consensus 220 wa~pedqcfVlAPQy~~if~d~e~~t~----~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFA 295 (387)
T COG4099 220 WAGPEDQCFVLAPQYNPIFADSEEKTL----LYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFA 295 (387)
T ss_pred eecccCceEEEcccccccccccccccc----hhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhh
Confidence 11222244555555321 111211110 1112222333 356666665 899999999999999999999999 89
Q ss_pred EEEeccCccCHHHHHHHHHHHhhhhCCcccHHHHHHHHHHHhhhhhhccccccchhhcCCCCCCcEEEEeeCCCCccChH
Q 016885 162 GMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRAR 241 (381)
Q Consensus 162 ~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~ 241 (381)
+.+++|+..+-.... ..+ -++|+.++|+.+|+++|.+
T Consensus 296 aa~~iaG~~d~v~lv-----------------------------------------~~l--k~~piWvfhs~dDkv~Pv~ 332 (387)
T COG4099 296 AAVPIAGGGDRVYLV-----------------------------------------RTL--KKAPIWVFHSSDDKVIPVS 332 (387)
T ss_pred eeeeecCCCchhhhh-----------------------------------------hhh--ccCceEEEEecCCCccccC
Confidence 999998875421100 111 1489999999999999999
Q ss_pred HHHHHHHHcCC---CceEE-------EeCC-CCCCC-ChhhHHHHHHHHHHh
Q 016885 242 HSDLIFNAYAG---DKNII-------KFDG-DHNSS-RPQFYYDSVSIFFYN 281 (381)
Q Consensus 242 ~~~~l~~~~~~---~~~~~-------~~~g-gH~~~-~~~~~~~~i~~fl~~ 281 (381)
.++-+++.+.. ...+. +.+| .|... .+..-...+.+||-+
T Consensus 333 nSrv~y~~lk~~~~kv~Ytaf~~g~~~~eG~d~~g~w~atyn~~eaieWLl~ 384 (387)
T COG4099 333 NSRVLYERLKALDRKVNYTAFLEGTTVLEGVDHSGVWWATYNDAEAIEWLLK 384 (387)
T ss_pred cceeehHHHHhhccccchhhhhhccccccccCCCCcceeecCCHHHHHHHHh
Confidence 98888877742 22222 2344 45533 333334556778754
No 108
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=99.45 E-value=4.7e-12 Score=103.95 Aligned_cols=179 Identities=18% Similarity=0.235 Sum_probs=124.9
Q ss_pred CCCcEEEEeCCCCCChhcHH----HHHHHhccCCcEEEEeCCCCC----CCC--CC-----CC----c-CCCcchh----
Q 016885 64 TPLPCVVYCHGNSGCRADAN----EAAVILLPSNITLFTLDFSGS----GLS--DG-----DY----V-SLGWHEK---- 119 (381)
Q Consensus 64 ~~~p~vv~~HG~~~~~~~~~----~~~~~l~~~G~~vi~~D~~G~----G~S--~~-----~~----~-~~~~~~~---- 119 (381)
..++-|||+||+-.+...+. .+.+.|.+. +..+-+|-|-- +.+ .+ .+ . ..+|...
T Consensus 3 ~~k~rvLcLHGfrQsg~~F~~Ktg~~rK~l~k~-~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~ 81 (230)
T KOG2551|consen 3 QKKLRVLCLHGFRQSGKVFSEKTGSLRKLLKKL-AELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEAS 81 (230)
T ss_pred CCCceEEEecchhhccHHHHHHhhhHHHHHHhh-heEEecCCCccCCcccCCcccccccccCCcccccchhhhhcccccc
Confidence 35689999999998877664 233444444 66666666521 111 11 00 0 1223211
Q ss_pred --------hHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhhcc---------CCCccEEEeccCccCHHHHHHHHHHH
Q 016885 120 --------DDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAE---------DPSIAGMVLDSAFSDLFDLMLELVDV 182 (381)
Q Consensus 120 --------~d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~---------~p~v~~vi~~~~~~~~~~~~~~~~~~ 182 (381)
+.+..+.+|++++.+.+ +|+|+|.|+.++..+++. .|.++-+|+++++.......
T Consensus 82 ~~~~~~~eesl~yl~~~i~enGPFD--GllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~~~~------ 153 (230)
T KOG2551|consen 82 FTEYFGFEESLEYLEDYIKENGPFD--GLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPSKKL------ 153 (230)
T ss_pred cccccChHHHHHHHHHHHHHhCCCc--cccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCcchh------
Confidence 23666677777765444 789999999999988872 23478888888875432100
Q ss_pred hhhhCCcccHHHHHHHHHHHhhhhhhccccccchhhcCCCCCCcEEEEeeCCCCccChHHHHHHHHHcCCCceEEEeCCC
Q 016885 183 YKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDGD 262 (381)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~gg 262 (381)
......+.+++|.|.|.|+.|.+++...+..|++.+.++ .++..+||
T Consensus 154 --------------------------------~~~~~~~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a-~vl~Hpgg 200 (230)
T KOG2551|consen 154 --------------------------------DESAYKRPLSTPSLHIFGETDTIVPSERSEQLAESFKDA-TVLEHPGG 200 (230)
T ss_pred --------------------------------hhhhhccCCCCCeeEEecccceeecchHHHHHHHhcCCC-eEEecCCC
Confidence 001334568899999999999999999999999999887 77788999
Q ss_pred CCCCChhhHHHHHHHHHHhhcC
Q 016885 263 HNSSRPQFYYDSVSIFFYNVLH 284 (381)
Q Consensus 263 H~~~~~~~~~~~i~~fl~~~l~ 284 (381)
|..+....+.+.+.+|+...+.
T Consensus 201 H~VP~~~~~~~~i~~fi~~~~~ 222 (230)
T KOG2551|consen 201 HIVPNKAKYKEKIADFIQSFLQ 222 (230)
T ss_pred ccCCCchHHHHHHHHHHHHHHH
Confidence 9999999999999999987664
No 109
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.44 E-value=1.8e-11 Score=108.62 Aligned_cols=232 Identities=13% Similarity=0.091 Sum_probs=142.2
Q ss_pred CeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhcHH-------HHHHH-------hccCCcEEEEeCCCCCC-CCCCC-
Q 016885 47 GHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADAN-------EAAVI-------LLPSNITLFTLDFSGSG-LSDGD- 110 (381)
Q Consensus 47 g~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~-------~~~~~-------l~~~G~~vi~~D~~G~G-~S~~~- 110 (381)
+..|.+..|--. ......+||++||+.|+..... .+.+. +--..|-|++.|..|.. .|.+.
T Consensus 35 ~~~vay~T~Gtl---n~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~ 111 (368)
T COG2021 35 DARVAYETYGTL---NAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPS 111 (368)
T ss_pred CcEEEEEecccc---cccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCC
Confidence 456666666332 2355789999999998654332 12222 33345899999999874 33321
Q ss_pred ---Cc------CCCcchhhHHHHHHHHHHhcCCCCcEE-EEEEchhHHHHHHhhccCCC-ccEEEeccCccCHHHHH---
Q 016885 111 ---YV------SLGWHEKDDLKVVVSYLRGNKQTSRIG-LWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLM--- 176 (381)
Q Consensus 111 ---~~------~~~~~~~~d~~~~i~~l~~~~~~~~i~-l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~~~~~~--- 176 (381)
+. .+....+.|+..+-..+.+..+++++. ++|-||||+.++.++..+|+ |+.+|.++.........
T Consensus 112 s~~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~~ia~ 191 (368)
T COG2021 112 SINPGGKPYGSDFPVITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQNIAF 191 (368)
T ss_pred CcCCCCCccccCCCcccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHHHHHH
Confidence 11 011123678888778888888998876 99999999999999999998 87777766544322111
Q ss_pred HHHHHHhhhhCCcc-------------cHH------------------------------------HHHHHHHHH----h
Q 016885 177 LELVDVYKIRLPKF-------------TVK------------------------------------MAVQYMRRV----I 203 (381)
Q Consensus 177 ~~~~~~~~~~~~~~-------------~~~------------------------------------~~~~~~~~~----~ 203 (381)
....+..-...|.+ .++ ....++... +
T Consensus 192 ~~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f~vESYL~~qg~kf~ 271 (368)
T COG2021 192 NEVQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRGGGVRFAVESYLDYQGDKFV 271 (368)
T ss_pred HHHHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCCCchhHHHHHHHHHHHHHHH
Confidence 11111100111111 000 000111000 0
Q ss_pred ------------hhhhhcccc--ccchhhcCCCCCCcEEEEeeCCCCccChHHHHHHHHHcCCCceEEEeCC--CCCCC-
Q 016885 204 ------------QKKAKFDIM--DLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG--DHNSS- 266 (381)
Q Consensus 204 ------------~~~~~~~~~--~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~g--gH~~~- 266 (381)
.....++.. .-+....+.++++|+|++.-+.|..+|++..+.+.+.++....+++++. ||...
T Consensus 272 ~rfDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~~~~i~S~~GHDaFL 351 (368)
T COG2021 272 ARFDANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALAEALPAAGALREIDSPYGHDAFL 351 (368)
T ss_pred hccCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHHHhccccCceEEecCCCCchhhh
Confidence 000001111 1133455788999999999999999999999999999987655777775 88732
Q ss_pred -ChhhHHHHHHHHHHh
Q 016885 267 -RPQFYYDSVSIFFYN 281 (381)
Q Consensus 267 -~~~~~~~~i~~fl~~ 281 (381)
..+.+...|..||+.
T Consensus 352 ~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 352 VESEAVGPLIRKFLAL 367 (368)
T ss_pred cchhhhhHHHHHHhhc
Confidence 555666778888753
No 110
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=99.42 E-value=9.6e-13 Score=114.02 Aligned_cols=183 Identities=21% Similarity=0.274 Sum_probs=128.2
Q ss_pred EEEEEcCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcch
Q 016885 39 DLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE 118 (381)
Q Consensus 39 ~v~~~~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~ 118 (381)
+..+.+.||.+|...+..-.+...+....+||++-|..|--+. .....=++.||.|+.+++||++.|.|.+... .+
T Consensus 216 R~kiks~dgneiDtmF~d~r~n~~~ngq~LvIC~EGNAGFYEv--G~m~tP~~lgYsvLGwNhPGFagSTG~P~p~--n~ 291 (517)
T KOG1553|consen 216 RLKIKSSDGNEIDTMFLDGRPNQSGNGQDLVICFEGNAGFYEV--GVMNTPAQLGYSVLGWNHPGFAGSTGLPYPV--NT 291 (517)
T ss_pred EEEEeecCCcchhheeecCCCCCCCCCceEEEEecCCccceEe--eeecChHHhCceeeccCCCCccccCCCCCcc--cc
Confidence 4557888999888765532222334557789999998764432 2233344669999999999999999987655 34
Q ss_pred hhHHHHHHHHHHhcCCC--CcEEEEEEchhHHHHHHhhccCCCccEEEeccCccCHHHHHHHHHHHhhhhCCcccHHHHH
Q 016885 119 KDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAV 196 (381)
Q Consensus 119 ~~d~~~~i~~l~~~~~~--~~i~l~G~S~GG~~a~~~a~~~p~v~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (381)
...+.+++++.....+. +.|+++|+|.||+.++.+|..+|+|+++|+.+.+.++...... .+|.+...
T Consensus 292 ~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPdVkavvLDAtFDDllpLAl~-------rMP~~~~g--- 361 (517)
T KOG1553|consen 292 LNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPDVKAVVLDATFDDLLPLALF-------RMPTFFSG--- 361 (517)
T ss_pred hHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCCceEEEeecchhhhhhHHhh-------hchHHHHH---
Confidence 56677888888887765 8899999999999999999999999999999988776543221 22222111
Q ss_pred HHHHHHhhhhhhccccccchhhcCCCCCCcEEEEeeCCCCccChH
Q 016885 197 QYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRAR 241 (381)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~ 241 (381)
.....++ ...+++..+.+.+.+.|+.+|.-.+|+++...
T Consensus 362 -iV~~aiR-----nh~NLnnaell~ry~GPi~lIRRt~dEIitt~ 400 (517)
T KOG1553|consen 362 -IVEHAIR-----NHMNLNNAELLARYKGPIRLIRRTQDEIITTA 400 (517)
T ss_pred -HHHHHHH-----HhcccchHHHHHhhcCchhHhhhhhHhhhhcc
Confidence 1111111 12233444667778899999999999987544
No 111
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.40 E-value=1.1e-12 Score=92.47 Aligned_cols=63 Identities=25% Similarity=0.359 Sum_probs=56.5
Q ss_pred CeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcC
Q 016885 47 GHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVS 113 (381)
Q Consensus 47 g~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~ 113 (381)
|.+|.+..|.|+. +++.+|+++||++.+...|..+++.|+++||.|+++|+||||.|.+....
T Consensus 1 G~~L~~~~w~p~~----~~k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~ 63 (79)
T PF12146_consen 1 GTKLFYRRWKPEN----PPKAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRGH 63 (79)
T ss_pred CcEEEEEEecCCC----CCCEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCCCcccc
Confidence 6789999999862 37899999999999999999999999999999999999999999975543
No 112
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.36 E-value=6e-13 Score=113.60 Aligned_cols=164 Identities=18% Similarity=0.234 Sum_probs=88.3
Q ss_pred hHHHHHHHHHHhcCCC--CcEEEEEEchhHHHHHHhhccCCCccEEEeccCccCHHHHHHHHHHHhhhhCCcccHHHHHH
Q 016885 120 DDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQ 197 (381)
Q Consensus 120 ~d~~~~i~~l~~~~~~--~~i~l~G~S~GG~~a~~~a~~~p~v~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (381)
+-+..+++||+++..+ ++|+|+|.|.||-+|+.+|..+|+|+++|+++|..-........... ...+|..+......
T Consensus 4 Eyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~~i~avVa~~ps~~~~~~~~~~~~~-~~~lp~~~~~~~~~ 82 (213)
T PF08840_consen 4 EYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFPQISAVVAISPSSVVFQGIGFYRDS-SKPLPYLPFDISKF 82 (213)
T ss_dssp HHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSSSEEEEEEES--SB--SSEEEETTE---EE----B-GGG-
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCCCccEEEEeCCceeEecchhcccCC-CccCCcCCcChhhc
Confidence 5678999999999876 69999999999999999999999999999988865332100000000 00111111100000
Q ss_pred --HHHHHhhhhhhccccccch----hhcCCCCCCcEEEEeeCCCCccChH-HHHHHHHHcCC-----CceEEEeCC-CCC
Q 016885 198 --YMRRVIQKKAKFDIMDLNC----LKLAPKTFIPALFGHASEDKFIRAR-HSDLIFNAYAG-----DKNIIKFDG-DHN 264 (381)
Q Consensus 198 --~~~~~~~~~~~~~~~~~~~----~~~~~~i~~Pvlii~G~~D~~v~~~-~~~~l~~~~~~-----~~~~~~~~g-gH~ 264 (381)
...........+....... .-.+.++++|+|++.|++|.+.|.. .++.+.+++.. ..+++.|++ ||.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~a~IpvE~i~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~~~~~l~Y~~aGH~ 162 (213)
T PF08840_consen 83 SWNEPGLLRSRYAFELADDKAVEEARIPVEKIKGPILLISGEDDQIWPSSEMAEQIEERLKAAGFPHNVEHLSYPGAGHL 162 (213)
T ss_dssp EE-TTS-EE-TT-B--TTTGGGCCCB--GGG--SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----EEEEETTB-S-
T ss_pred eecCCcceehhhhhhcccccccccccccHHHcCCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCCCcceEEEcCCCCce
Confidence 0000000000011111011 1134568999999999999999876 45555565521 356777887 998
Q ss_pred CCC------------------------------hhhHHHHHHHHHHhhcC
Q 016885 265 SSR------------------------------PQFYYDSVSIFFYNVLH 284 (381)
Q Consensus 265 ~~~------------------------------~~~~~~~i~~fl~~~l~ 284 (381)
... .++.+..+++||+++|.
T Consensus 163 i~~Py~P~~~~~~~~~~~~~~~~GG~~~~~a~A~~dsW~~~l~Fl~~~L~ 212 (213)
T PF08840_consen 163 IEPPYFPHCRASYHKFIGTPLAWGGEPEAHAKAQEDSWKKILEFLRKHLG 212 (213)
T ss_dssp --STT-----EEEETTTTEEEE--B-HHHHHHHHHHHHHHHHHHHHHH--
T ss_pred ecCCCCCCcccccccccCCcccCCCChHHHHHHHHHHHHHHHHHHHHHhC
Confidence 431 14678889999999885
No 113
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=99.36 E-value=4.6e-12 Score=117.07 Aligned_cols=178 Identities=20% Similarity=0.294 Sum_probs=98.6
Q ss_pred CCCcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCC-CCC-----CC-----C-----CcC-----CC-------
Q 016885 64 TPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGS-GLS-----DG-----D-----YVS-----LG------- 115 (381)
Q Consensus 64 ~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~-G~S-----~~-----~-----~~~-----~~------- 115 (381)
++.|+|||.||+++++..+..++..||++||.|+++|+|.. +-. ++ . ... ..
T Consensus 98 ~~~PvvIFSHGlgg~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEE 177 (379)
T ss_dssp S-EEEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGH
T ss_pred CCCCEEEEeCCCCcchhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhH
Confidence 67999999999999999999999999999999999999953 110 00 0 000 00
Q ss_pred c--------chhhHHHHHHHHHHhc----------------------CCCCcEEEEEEchhHHHHHHhhccCCCccEEEe
Q 016885 116 W--------HEKDDLKVVVSYLRGN----------------------KQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVL 165 (381)
Q Consensus 116 ~--------~~~~d~~~~i~~l~~~----------------------~~~~~i~l~G~S~GG~~a~~~a~~~p~v~~vi~ 165 (381)
+ ..+.++..+++.+++. .+.++|+++|||+||.+++.++....++++.|+
T Consensus 178 ~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d~r~~~~I~ 257 (379)
T PF03403_consen 178 FELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQDTRFKAGIL 257 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH-TT--EEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhccCcceEEE
Confidence 0 0134566666666531 112689999999999999999998888999998
Q ss_pred ccCccCHHHHHHHHHHHhhhhCCcccHHHHHHHHHHHhhhhhhccccccchhhcCCCCCCcEEEEeeCCCCccChHHHHH
Q 016885 166 DSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDL 245 (381)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~ 245 (381)
+.|+.-+.. . +....++.|+|+|+.+. +.-......
T Consensus 258 LD~W~~Pl~--------------~----------------------------~~~~~i~~P~L~InSe~--f~~~~~~~~ 293 (379)
T PF03403_consen 258 LDPWMFPLG--------------D----------------------------EIYSKIPQPLLFINSES--FQWWENIFR 293 (379)
T ss_dssp ES---TTS---------------G----------------------------GGGGG--S-EEEEEETT--T--HHHHHH
T ss_pred eCCcccCCC--------------c----------------------------ccccCCCCCEEEEECcc--cCChhhHHH
Confidence 887642100 0 11234578999998875 222233333
Q ss_pred HHHHc--CCCceEEEeCC-CCCCC------Ch-------------------hhHHHHHHHHHHhhcCC
Q 016885 246 IFNAY--AGDKNIIKFDG-DHNSS------RP-------------------QFYYDSVSIFFYNVLHP 285 (381)
Q Consensus 246 l~~~~--~~~~~~~~~~g-gH~~~------~~-------------------~~~~~~i~~fl~~~l~~ 285 (381)
+.+.. .....++.+.| +|... .| +...+.+++||+++|.-
T Consensus 294 ~~~~~~~~~~~~~~ti~gt~H~s~sD~~ll~P~~l~~~~~~~g~~dp~~a~~i~~~~~l~FL~~~L~~ 361 (379)
T PF03403_consen 294 MKKVISNNKESRMLTIKGTAHLSFSDFPLLSPWLLGKFLGLKGSIDPERALRINNRASLAFLRRHLGL 361 (379)
T ss_dssp HHTT--TTS-EEEEEETT--GGGGSGGGGTS-HHHHHHTTSS-SS-HHHHHHHHHHHHHHHHHHHHT-
T ss_pred HHHHhccCCCcEEEEECCCcCCCcchhhhhhHHHHHHHhccccCcCHHHHHHHHHHHHHHHHHHhcCC
Confidence 33322 23456677777 89721 11 23455677888888764
No 114
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.34 E-value=6.6e-12 Score=109.73 Aligned_cols=209 Identities=22% Similarity=0.288 Sum_probs=87.6
Q ss_pred CCcEEEEeCCCCCCh---hcHHHHHHHhccCCcEEEEeCCC----CCCCCCCCCcCCCcchhhHHHHHHHHHHhcC----
Q 016885 65 PLPCVVYCHGNSGCR---ADANEAAVILLPSNITLFTLDFS----GSGLSDGDYVSLGWHEKDDLKVVVSYLRGNK---- 133 (381)
Q Consensus 65 ~~p~vv~~HG~~~~~---~~~~~~~~~l~~~G~~vi~~D~~----G~G~S~~~~~~~~~~~~~d~~~~i~~l~~~~---- 133 (381)
+..+|||+.|.+... .....+++.|.+.||.|+-+.++ |+|.++- -.+++|+.++++|++...
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~SL------~~D~~eI~~~v~ylr~~~~g~~ 105 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTSSL------DRDVEEIAQLVEYLRSEKGGHF 105 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S--H------HHHHHHHHHHHHHHHHHS----
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcchh------hhHHHHHHHHHHHHHHhhcccc
Confidence 667999999998543 44678889998889999999865 4443321 144899999999999984
Q ss_pred CCCcEEEEEEchhHHHHHHhhccC------CCccEEEeccCccCHHH---------HHHHHHHHhh---------hhCCc
Q 016885 134 QTSRIGLWGRSMGAVTSLLYGAED------PSIAGMVLDSAFSDLFD---------LMLELVDVYK---------IRLPK 189 (381)
Q Consensus 134 ~~~~i~l~G~S~GG~~a~~~a~~~------p~v~~vi~~~~~~~~~~---------~~~~~~~~~~---------~~~~~ 189 (381)
..++|+|+|||-|+.-++.|+... +.|+++|+-+|.++... .......... ..+|.
T Consensus 106 ~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~~~~~~~~~~v~~A~~~i~~g~~~~~lp~ 185 (303)
T PF08538_consen 106 GREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFLGEREAYEELVALAKELIAEGKGDEILPR 185 (303)
T ss_dssp --S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSHHH---HHHHHHHHHHHHHCT-TT-GG--
T ss_pred CCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhcccchHHHHHHHHHHHHHHHcCCCCceeec
Confidence 458999999999999999998764 23999999998774221 1111111110 00110
Q ss_pred cc-------H-HHHHHHHHHHh----hhhhhccccccchhhcCCCCCCcEEEEeeCCCCccChH-HHHHHHHHcCCC---
Q 016885 190 FT-------V-KMAVQYMRRVI----QKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRAR-HSDLIFNAYAGD--- 253 (381)
Q Consensus 190 ~~-------~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~-~~~~l~~~~~~~--- 253 (381)
-. . -...+|+.-.. .+.+..++.+-...+.+.++.+|+|++.+++|+.||.. ....+.+++...
T Consensus 186 ~~~~~~~~~~PiTA~Rf~SL~s~~gdDD~FSSDL~de~l~~tfG~v~~plLvl~Sg~DEyvP~~vdk~~Ll~rw~~a~~~ 265 (303)
T PF08538_consen 186 EFTPLVFYDTPITAYRFLSLASPGGDDDYFSSDLSDERLKKTFGKVSKPLLVLYSGKDEYVPPWVDKEALLERWKAATNP 265 (303)
T ss_dssp --GGTTT-SS---HHHHHT-S-SSHHHHTHHHHHTT-HHHHTGGG--S-EEEEEE--TT---------------------
T ss_pred cccccccCCCcccHHHHHhccCCCCcccccCCCCCHHHHHHHhccCCCceEEEecCCCceeccccccccccccccccccc
Confidence 00 0 00111111000 01111122222344567778899999999999999876 445566665321
Q ss_pred ----ceEEEeCC-CCCCCCh------hhHHHHHHHHH
Q 016885 254 ----KNIIKFDG-DHNSSRP------QFYYDSVSIFF 279 (381)
Q Consensus 254 ----~~~~~~~g-gH~~~~~------~~~~~~i~~fl 279 (381)
..-.+++| +|....+ +.+.+.+..||
T Consensus 266 ~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl 302 (303)
T PF08538_consen 266 KIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFL 302 (303)
T ss_dssp -------------------------------------
T ss_pred ccccccccccccccccccccccccccccccccccccC
Confidence 12346676 8886532 24566666665
No 115
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.34 E-value=4e-11 Score=98.25 Aligned_cols=148 Identities=18% Similarity=0.193 Sum_probs=91.8
Q ss_pred EEEeCCCCCChh-cH-HHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchhhHHHHHHHHHHhcCC--CCcEEEEEEc
Q 016885 69 VVYCHGNSGCRA-DA-NEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQ--TSRIGLWGRS 144 (381)
Q Consensus 69 vv~~HG~~~~~~-~~-~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~i~~l~~~~~--~~~i~l~G~S 144 (381)
|+++||++++.. .| .++.+.|... +.|-.+++- .-++.+.+..+.+... .++++++|||
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~~----------------~P~~~~W~~~l~~~i~~~~~~~ilVaHS 63 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDWD----------------NPDLDEWVQALDQAIDAIDEPTILVAHS 63 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC--T----------------S--HHHHHHHHHHCCHC-TTTEEEEEET
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEeccccC----------------CCCHHHHHHHHHHHHhhcCCCeEEEEeC
Confidence 689999998754 34 4556677665 777776661 0244555555555432 2679999999
Q ss_pred hhHHHHHHhh-ccCCC-ccEEEeccCccCHHHHHHHHHHHhhhhCCcccHHHHHHHHHHHhhhhhhccccccchhhcCCC
Q 016885 145 MGAVTSLLYG-AEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPK 222 (381)
Q Consensus 145 ~GG~~a~~~a-~~~p~-v~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (381)
+|+.+++.++ ..... |+|+++++|+...... ...+. ...+.. .....
T Consensus 64 LGc~~~l~~l~~~~~~~v~g~lLVAp~~~~~~~---------~~~~~----------------~~~f~~------~p~~~ 112 (171)
T PF06821_consen 64 LGCLTALRWLAEQSQKKVAGALLVAPFDPDDPE---------PFPPE----------------LDGFTP------LPRDP 112 (171)
T ss_dssp HHHHHHHHHHHHTCCSSEEEEEEES--SCGCHH---------CCTCG----------------GCCCTT------SHCCH
T ss_pred HHHHHHHHHHhhcccccccEEEEEcCCCccccc---------chhhh----------------cccccc------Ccccc
Confidence 9999999999 44444 9999999998642000 00000 000100 11122
Q ss_pred CCCcEEEEeeCCCCccChHHHHHHHHHcCCCceEEEeCC-CCCCC
Q 016885 223 TFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS 266 (381)
Q Consensus 223 i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~g-gH~~~ 266 (381)
+.+|.+++.+++|+++|.+.++++++.++. +++.+++ ||+..
T Consensus 113 l~~~~~viaS~nDp~vp~~~a~~~A~~l~a--~~~~~~~~GHf~~ 155 (171)
T PF06821_consen 113 LPFPSIVIASDNDPYVPFERAQRLAQRLGA--ELIILGGGGHFNA 155 (171)
T ss_dssp HHCCEEEEEETTBSSS-HHHHHHHHHHHT---EEEEETS-TTSSG
T ss_pred cCCCeEEEEcCCCCccCHHHHHHHHHHcCC--CeEECCCCCCccc
Confidence 346779999999999999999999999955 5777775 99954
No 116
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.34 E-value=1e-10 Score=103.88 Aligned_cols=221 Identities=16% Similarity=0.182 Sum_probs=133.8
Q ss_pred EEEEeecCCCCCCCCCcEEEEeCCCCCChhcHH-HH-HHHhccCCcEEEEeCCCCCCCCCCCCcCCC------------c
Q 016885 51 QCSHYMPSPFPEDTPLPCVVYCHGNSGCRADAN-EA-AVILLPSNITLFTLDFSGSGLSDGDYVSLG------------W 116 (381)
Q Consensus 51 ~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~-~~-~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~------------~ 116 (381)
+..+..|..- ....+|++|.+.|.|....... .+ +..|++.|+..+.+..|-||.......... .
T Consensus 78 ~~~~~~P~~~-~~~~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~ 156 (348)
T PF09752_consen 78 RFQLLLPKRW-DSPYRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGR 156 (348)
T ss_pred EEEEEECCcc-ccCCCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHh
Confidence 3344556532 2356899999999987544322 33 788888999999999999987653221111 1
Q ss_pred chhhHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhhccCCC-ccEEEeccCccCHHHHH----------HHHHHHhh-
Q 016885 117 HEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLM----------LELVDVYK- 184 (381)
Q Consensus 117 ~~~~d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~~~~~~----------~~~~~~~~- 184 (381)
..+.+...+++|++++ +..++++.|.||||.+|..+|+..|. +..+-++++.+.-.-+. ..+...+.
T Consensus 157 ~~i~E~~~Ll~Wl~~~-G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vFt~Gvls~~i~W~~L~~q~~~ 235 (348)
T PF09752_consen 157 ATILESRALLHWLERE-GYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVFTEGVLSNSINWDALEKQFED 235 (348)
T ss_pred HHHHHHHHHHHHHHhc-CCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcchhhhhhhcCCCHHHHHHHhcc
Confidence 2256677889999998 78899999999999999999999998 44444444332110000 00000000
Q ss_pred -------hhCCc-------------ccHHHHHHHHHHHhhhhhhccccccchhhcCCCCCCcEEEEeeCCCCccChHHHH
Q 016885 185 -------IRLPK-------------FTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSD 244 (381)
Q Consensus 185 -------~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~ 244 (381)
...+. ........++......... ..++ ..+.-.-.+.++.+++|.+||.....
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ea~~~m~~~md~~T~--l~nf----~~P~dp~~ii~V~A~~DaYVPr~~v~ 309 (348)
T PF09752_consen 236 TVYEEEISDIPAQNKSLPLDSMEERRRDREALRFMRGVMDSFTH--LTNF----PVPVDPSAIIFVAAKNDAYVPRHGVL 309 (348)
T ss_pred cchhhhhcccccCcccccchhhccccchHHHHHHHHHHHHhhcc--cccc----CCCCCCCcEEEEEecCceEechhhcc
Confidence 00000 0001111111111111000 0000 01111235789999999999999999
Q ss_pred HHHHHcCCCceEEEeCCCCCCC---ChhhHHHHHHHHHH
Q 016885 245 LIFNAYAGDKNIIKFDGDHNSS---RPQFYYDSVSIFFY 280 (381)
Q Consensus 245 ~l~~~~~~~~~~~~~~ggH~~~---~~~~~~~~i~~fl~ 280 (381)
.+.+.+++. ++..++|||... +.+.+.+.|.+=|+
T Consensus 310 ~Lq~~WPGs-EvR~l~gGHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 310 SLQEIWPGS-EVRYLPGGHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred hHHHhCCCC-eEEEecCCcEEEeeechHHHHHHHHHHhh
Confidence 998888775 888899999844 56677777766543
No 117
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.34 E-value=7.7e-11 Score=91.31 Aligned_cols=165 Identities=15% Similarity=0.137 Sum_probs=111.0
Q ss_pred CCCCcEEEEeCCCCCChhc--HHHHHHHhccCCcEEEEeCCCCCCCCC-C--CCcCCCcchhhHHHHHHHHHHhcCCCCc
Q 016885 63 DTPLPCVVYCHGNSGCRAD--ANEAAVILLPSNITLFTLDFSGSGLSD-G--DYVSLGWHEKDDLKVVVSYLRGNKQTSR 137 (381)
Q Consensus 63 ~~~~p~vv~~HG~~~~~~~--~~~~~~~l~~~G~~vi~~D~~G~G~S~-~--~~~~~~~~~~~d~~~~i~~l~~~~~~~~ 137 (381)
+...-+||+.||.|++.++ +...+..|+.+|+.|..++++..-... + .+.+..-.--.....++..++......+
T Consensus 11 g~~~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~~gp 90 (213)
T COG3571 11 GPAPVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLAEGP 90 (213)
T ss_pred CCCCEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcccCCc
Confidence 3456689999999987665 567788999999999999998753221 1 1111111112344555666777666679
Q ss_pred EEEEEEchhHHHHHHhhccCC-CccEEEeccCccCHHHHHHHHHHHhhhhCCcccHHHHHHHHHHHhhhhhhccccccch
Q 016885 138 IGLWGRSMGAVTSLLYGAEDP-SIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNC 216 (381)
Q Consensus 138 i~l~G~S~GG~~a~~~a~~~p-~v~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (381)
+++-|+||||-++-+++.... .|.++++.+-++.. |..+.+ -.
T Consensus 91 Li~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhp---------------pGKPe~---------------------~R 134 (213)
T COG3571 91 LIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFHP---------------PGKPEQ---------------------LR 134 (213)
T ss_pred eeeccccccchHHHHHHHhhcCCcceEEEecCccCC---------------CCCccc---------------------ch
Confidence 999999999999988876644 38899987644321 111110 11
Q ss_pred hhcCCCCCCcEEEEeeCCCCccChHHHHHHHHHcCCCceEEEeCC-CCCC
Q 016885 217 LKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNS 265 (381)
Q Consensus 217 ~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~g-gH~~ 265 (381)
.+++..+++|+||.+|+.|++-..+.+. .-.+....+++.+++ +|..
T Consensus 135 t~HL~gl~tPtli~qGtrD~fGtr~~Va--~y~ls~~iev~wl~~adHDL 182 (213)
T COG3571 135 TEHLTGLKTPTLITQGTRDEFGTRDEVA--GYALSDPIEVVWLEDADHDL 182 (213)
T ss_pred hhhccCCCCCeEEeecccccccCHHHHH--hhhcCCceEEEEeccCcccc
Confidence 2567788999999999999998766552 223355667877776 7763
No 118
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.33 E-value=3.5e-11 Score=101.06 Aligned_cols=116 Identities=15% Similarity=0.135 Sum_probs=93.5
Q ss_pred eEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchhhHHHHHHH
Q 016885 48 HVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVS 127 (381)
Q Consensus 48 ~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~i~ 127 (381)
......++.|. ..+..|+|+|+||+.-....|..+...++++||.|+++++-..- . ..+..++++..++++
T Consensus 31 pPkpLlI~tP~---~~G~yPVilF~HG~~l~ns~Ys~lL~HIASHGfIVVAPQl~~~~--~----p~~~~Ei~~aa~V~~ 101 (307)
T PF07224_consen 31 PPKPLLIVTPS---EAGTYPVILFLHGFNLYNSFYSQLLAHIASHGFIVVAPQLYTLF--P----PDGQDEIKSAASVIN 101 (307)
T ss_pred CCCCeEEecCC---cCCCccEEEEeechhhhhHHHHHHHHHHhhcCeEEEechhhccc--C----CCchHHHHHHHHHHH
Confidence 34555677786 57889999999999988888999999999999999999986421 1 223456889999999
Q ss_pred HHHhcC----------CCCcEEEEEEchhHHHHHHhhccCC-C--ccEEEeccCccCH
Q 016885 128 YLRGNK----------QTSRIGLWGRSMGAVTSLLYGAEDP-S--IAGMVLDSAFSDL 172 (381)
Q Consensus 128 ~l~~~~----------~~~~i~l~G~S~GG~~a~~~a~~~p-~--v~~vi~~~~~~~~ 172 (381)
|+.+.. +..+++++|||.||-+|..+|..+. + +.++|.+.|....
T Consensus 102 WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~ 159 (307)
T PF07224_consen 102 WLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGT 159 (307)
T ss_pred HHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccCCC
Confidence 998763 2278999999999999999998774 3 8899988887654
No 119
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.32 E-value=4.7e-11 Score=103.75 Aligned_cols=207 Identities=12% Similarity=0.118 Sum_probs=117.5
Q ss_pred cEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchhhHHHHHHHHHHhcCCCCcEEEEEEchh
Q 016885 67 PCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMG 146 (381)
Q Consensus 67 p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~i~l~G~S~G 146 (381)
++|+++||.+|+...|..+++.|...++.|++++++|.+... ....+. -+-+...++.++.....+++.|+|||+|
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~~~~~~v~~i~~~~~~~~~--~~~~si--~~la~~y~~~I~~~~~~gp~~L~G~S~G 76 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALPDDVIGVYGIEYPGRGDDE--PPPDSI--EELASRYAEAIRARQPEGPYVLAGWSFG 76 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHTTTEEEEEEECSTTSCTTS--HEESSH--HHHHHHHHHHHHHHTSSSSEEEEEETHH
T ss_pred CeEEEEcCCccCHHHHHHHHHhCCCCeEEEEEEecCCCCCCC--CCCCCH--HHHHHHHHHHhhhhCCCCCeeehccCcc
Confidence 479999999999999999999998755899999999987222 111111 1233445566666555569999999999
Q ss_pred HHHHHHhhccC----CCccEEEeccCccCH-H---HH-------HHHHHHHhhhhCCc-ccHH-HHHHHHHHHhhhhhhc
Q 016885 147 AVTSLLYGAED----PSIAGMVLDSAFSDL-F---DL-------MLELVDVYKIRLPK-FTVK-MAVQYMRRVIQKKAKF 209 (381)
Q Consensus 147 G~~a~~~a~~~----p~v~~vi~~~~~~~~-~---~~-------~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~ 209 (381)
|.+|..+|.+. ..+..++++.+.... . .. .............. .... .....+..........
T Consensus 77 g~lA~E~A~~Le~~G~~v~~l~liD~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (229)
T PF00975_consen 77 GILAFEMARQLEEAGEEVSRLILIDSPPPSIKERPRSREPSDEQFIEELRRIGGTPDASLEDEELLARLLRALRDDFQAL 156 (229)
T ss_dssp HHHHHHHHHHHHHTT-SESEEEEESCSSTTCHSCHHHHHCHHHHHHHHHHHHCHHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhccCceEEecCCCCCcccchhhhhhhHHHHHHHHHHhcCCchhhhcCHHHHHHHHHHHHHHHHHH
Confidence 99999988753 238889888744321 1 00 00001100000000 0000 0111111111111110
Q ss_pred cccccchhhcCCCCCCcEEEEeeCCCCccChH---HHHHHHHHcCCCceEEEeCCCCCCCChhhHHHHHHHHHHh
Q 016885 210 DIMDLNCLKLAPKTFIPALFGHASEDKFIRAR---HSDLIFNAYAGDKNIIKFDGDHNSSRPQFYYDSVSIFFYN 281 (381)
Q Consensus 210 ~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~---~~~~l~~~~~~~~~~~~~~ggH~~~~~~~~~~~i~~fl~~ 281 (381)
... . ......-.+|.++.....|+..... ....+.+...+...++.++|+|+.... .....+.+.+.+
T Consensus 157 ~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~v~G~H~~~l~-~~~~~i~~~I~~ 227 (229)
T PF00975_consen 157 ENY--S-IRPIDKQKVPITLFYALDDPLVSMDRLEEADRWWDYTSGDVEVHDVPGDHFSMLK-PHVAEIAEKIAE 227 (229)
T ss_dssp HTC--S--TTSSSESSEEEEEEECSSSSSSHHCGGHHCHHHGCBSSSEEEEEESSETTGHHS-TTHHHHHHHHHH
T ss_pred hhc--c-CCccccCCCcEEEEecCCCccccchhhhhHHHHHHhcCCCcEEEEEcCCCcEecc-hHHHHHHHHHhc
Confidence 000 0 0111111467899999999888766 222344555667789999999996633 334555555544
No 120
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.32 E-value=1.3e-11 Score=114.78 Aligned_cols=108 Identities=11% Similarity=0.063 Sum_probs=79.5
Q ss_pred CCCcEEEEeCCCCCCh--hcHHH-HHHHhcc--CCcEEEEeCCCCCCCCCCCCcCCCc-chhhHHHHHHHHHHhcC--CC
Q 016885 64 TPLPCVVYCHGNSGCR--ADANE-AAVILLP--SNITLFTLDFSGSGLSDGDYVSLGW-HEKDDLKVVVSYLRGNK--QT 135 (381)
Q Consensus 64 ~~~p~vv~~HG~~~~~--~~~~~-~~~~l~~--~G~~vi~~D~~G~G~S~~~~~~~~~-~~~~d~~~~i~~l~~~~--~~ 135 (381)
...|++|++||++++. ..|.. ++..|.. ..|+|+++|++|+|.+......... ...+++.+++++|.+.. +.
T Consensus 39 ~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~gl~l 118 (442)
T TIGR03230 39 HETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFNYPW 118 (442)
T ss_pred CCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhCCCC
Confidence 4679999999998654 33543 5555542 3699999999999987533211111 12456788888886544 35
Q ss_pred CcEEEEEEchhHHHHHHhhccCCC-ccEEEeccCccC
Q 016885 136 SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSD 171 (381)
Q Consensus 136 ~~i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~ 171 (381)
++++|+||||||.+|..++...+. |.+++++.|...
T Consensus 119 ~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP 155 (442)
T TIGR03230 119 DNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGP 155 (442)
T ss_pred CcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCC
Confidence 899999999999999999988886 999999888643
No 121
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.31 E-value=5e-12 Score=112.35 Aligned_cols=109 Identities=13% Similarity=0.132 Sum_probs=78.3
Q ss_pred CCCCcEEEEeCCCCCCh-hcHH-HHHHHhc-cCCcEEEEeCCCCCCCCCCCCcCCCcc-hhhHHHHHHHHHHhcC--CCC
Q 016885 63 DTPLPCVVYCHGNSGCR-ADAN-EAAVILL-PSNITLFTLDFSGSGLSDGDYVSLGWH-EKDDLKVVVSYLRGNK--QTS 136 (381)
Q Consensus 63 ~~~~p~vv~~HG~~~~~-~~~~-~~~~~l~-~~G~~vi~~D~~G~G~S~~~~~~~~~~-~~~d~~~~i~~l~~~~--~~~ 136 (381)
+..+|++|++||++++. ..|. .++..+. ..+|+|+++|+++++...-........ ..+++..+++++.+.. +.+
T Consensus 33 ~~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a~~~~~~v~~~la~~l~~L~~~~g~~~~ 112 (275)
T cd00707 33 NPSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQAVNNTRVVGAELAKFLDFLVDNTGLSLE 112 (275)
T ss_pred CCCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHHHHHhHHHHHHHHHHHHHHHHHhcCCChH
Confidence 35678999999999887 4554 3455444 458999999999873321100000001 1357778888887763 348
Q ss_pred cEEEEEEchhHHHHHHhhccCCC-ccEEEeccCccC
Q 016885 137 RIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSD 171 (381)
Q Consensus 137 ~i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~ 171 (381)
+++++||||||.+|..++...++ +++++++.|...
T Consensus 113 ~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p 148 (275)
T cd00707 113 NVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGP 148 (275)
T ss_pred HEEEEEecHHHHHHHHHHHHhcCccceeEEecCCcc
Confidence 99999999999999999999886 999999887653
No 122
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.29 E-value=5.7e-10 Score=102.75 Aligned_cols=247 Identities=16% Similarity=0.131 Sum_probs=137.3
Q ss_pred ccccccCcceeeE-EEEEEcCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhcH-HHHHHHhccCCcEEEEeCCCC
Q 016885 26 RDFMLAGRSYKRQ-DLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADA-NEAAVILLPSNITLFTLDFSG 103 (381)
Q Consensus 26 ~~~~~~~~~~~~~-~v~~~~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~-~~~~~~l~~~G~~vi~~D~~G 103 (381)
.+....|..+.-. ++.+. .+-.+|. .|.|.........|.||++....+....+ +.+++.|.+ |+.|+..|+..
T Consensus 64 ~~~~~~~~~~~v~e~vV~~-~~~~~L~--~y~~~~~~~~~~~~pvLiV~Pl~g~~~~L~RS~V~~Ll~-g~dVYl~DW~~ 139 (406)
T TIGR01849 64 DEVEVDGKDVPIRERVVWD-KPFCRLI--HFKRQGFRAELPGPAVLIVAPMSGHYATLLRSTVEALLP-DHDVYITDWVN 139 (406)
T ss_pred ceEEECCEEeeeEEEEEEE-CCCeEEE--EECCCCcccccCCCcEEEEcCCchHHHHHHHHHHHHHhC-CCcEEEEeCCC
Confidence 3445566554332 33333 3433443 56664211112247888888888665543 578899999 99999999987
Q ss_pred CCCCCCCCcCCCcch-hhHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhhccC-----CC-ccEEEeccCccCHHHH-
Q 016885 104 SGLSDGDYVSLGWHE-KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAED-----PS-IAGMVLDSAFSDLFDL- 175 (381)
Q Consensus 104 ~G~S~~~~~~~~~~~-~~d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~-----p~-v~~vi~~~~~~~~~~~- 175 (381)
-+..+.....++..+ ++-+.++++.+ +.+ +.++|+|+||..++.+++.. |. ++.++++.++.+....
T Consensus 140 p~~vp~~~~~f~ldDYi~~l~~~i~~~----G~~-v~l~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~p 214 (406)
T TIGR01849 140 ARMVPLSAGKFDLEDYIDYLIEFIRFL----GPD-IHVIAVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARASP 214 (406)
T ss_pred CCCCchhcCCCCHHHHHHHHHHHHHHh----CCC-CcEEEEchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCCCC
Confidence 664432222223222 22233333222 445 99999999999976555543 43 8999988876653220
Q ss_pred --HHH---------HHHHh-----------h-hhCCcccH-------------HHHHHHHHHHhhhh-------h---h-
Q 016885 176 --MLE---------LVDVY-----------K-IRLPKFTV-------------KMAVQYMRRVIQKK-------A---K- 208 (381)
Q Consensus 176 --~~~---------~~~~~-----------~-~~~~~~~~-------------~~~~~~~~~~~~~~-------~---~- 208 (381)
... +.... + ..+|.+.. ....+++....... . .
T Consensus 215 ~~v~~~a~~~~i~~~~~~~i~~vp~~~~g~gr~v~PG~~~~~~F~~mnp~r~~~~~~~~~~~l~~gd~~~~~~~~~f~~~ 294 (406)
T TIGR01849 215 TVVNELAREKPIEWFQHNVIMRVPFPYPGAGRLVYPGFLQLAGFISMNLDRHTKAHSDFFLHLVKGDGQEADKHRIFYDE 294 (406)
T ss_pred chHHHHhhcccHHHHHHHhhhccCccccCCCCcccCHHHHHHHHHHcCcchHHHHHHHHHHHHhcCCcchHHHHHHHHHH
Confidence 000 01000 0 01221111 01111111111000 0 0
Q ss_pred -cccccc--------------------------chhhcCCCCC-CcEEEEeeCCCCccChHHHHHHHHHc---CC-CceE
Q 016885 209 -FDIMDL--------------------------NCLKLAPKTF-IPALFGHASEDKFIRARHSDLIFNAY---AG-DKNI 256 (381)
Q Consensus 209 -~~~~~~--------------------------~~~~~~~~i~-~Pvlii~G~~D~~v~~~~~~~l~~~~---~~-~~~~ 256 (381)
.+..++ ...-.+.+|+ +|+|.+.|+.|.++++.++..+.+.+ +. ++..
T Consensus 295 y~d~~dlpge~y~~~v~~vf~~n~L~~G~l~v~G~~Vdl~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~ 374 (406)
T TIGR01849 295 YLAVMDMTAEFYLQTIDVVFQQFLLPQGKFIVEGKRVDPGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRH 374 (406)
T ss_pred hhhccCCcHHHHHHHHHHHHHhCCccCCcEEECCEEecHHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceE
Confidence 000000 0112345688 99999999999999999999999885 43 4545
Q ss_pred EEe-CCCCCCC-----ChhhHHHHHHHHHHh
Q 016885 257 IKF-DGDHNSS-----RPQFYYDSVSIFFYN 281 (381)
Q Consensus 257 ~~~-~ggH~~~-----~~~~~~~~i~~fl~~ 281 (381)
++. ++||... ..++++..|.+||.+
T Consensus 375 ~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~ 405 (406)
T TIGR01849 375 HLQPGVGHYGVFSGSRFREEIYPLVREFIRR 405 (406)
T ss_pred eecCCCCeEEEeeChhhhhhhchHHHHHHHh
Confidence 555 5699833 567888999999975
No 123
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=99.27 E-value=1.2e-09 Score=96.00 Aligned_cols=220 Identities=18% Similarity=0.236 Sum_probs=133.6
Q ss_pred eEEEEEEcCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhcH-------HHHHHHhccCCcEEEEeCCCCCCCCCC
Q 016885 37 RQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADA-------NEAAVILLPSNITLFTLDFSGSGLSDG 109 (381)
Q Consensus 37 ~~~v~~~~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~-------~~~~~~l~~~G~~vi~~D~~G~G~S~~ 109 (381)
.+++.+. .|+..|.+.... .+...+...||++-|.++.-+.. ..+.+...+.|.+|+.++|||.|.|.|
T Consensus 112 ~kRv~Iq-~D~~~IDt~~I~---~~~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G 187 (365)
T PF05677_consen 112 VKRVPIQ-YDGVKIDTMAIH---QPEAKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTG 187 (365)
T ss_pred eeeEEEe-eCCEEEEEEEee---CCCCCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCC
Confidence 3455555 489888876542 12346788999999999876651 233333444589999999999999998
Q ss_pred CCcCCCcchhhHHHHHHHHHHhcCC---CCcEEEEEEchhHHHHHHhhccCC----C-ccE-EEeccCccCHHHHHHHHH
Q 016885 110 DYVSLGWHEKDDLKVVVSYLRGNKQ---TSRIGLWGRSMGAVTSLLYGAEDP----S-IAG-MVLDSAFSDLFDLMLELV 180 (381)
Q Consensus 110 ~~~~~~~~~~~d~~~~i~~l~~~~~---~~~i~l~G~S~GG~~a~~~a~~~p----~-v~~-vi~~~~~~~~~~~~~~~~ 180 (381)
.... ..-+.|..++++|++++.. .++|++.|||+||.++..++.... + ++- +|-.-++.++......+.
T Consensus 188 ~~s~--~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~~~~~dgi~~~~ikDRsfssl~~vas~~~ 265 (365)
T PF05677_consen 188 PPSR--KDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKEVLKGSDGIRWFLIKDRSFSSLAAVASQFF 265 (365)
T ss_pred CCCH--HHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhcccccCCCeeEEEEecCCcchHHHHHHHHH
Confidence 8753 2337899999999997542 289999999999999988665542 1 443 333456666554443222
Q ss_pred HHhhhhCCcccHHHHHHHHHHHhhhhhhccccccchhhcCCCCCCcEEEEeeCC-------CCccChHHHHHHHHHcC--
Q 016885 181 DVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASE-------DKFIRARHSDLIFNAYA-- 251 (381)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~-------D~~v~~~~~~~l~~~~~-- 251 (381)
... ..++. ...++++ +..+...++.||-+++++.+ |..++.+.+ ++..+-
T Consensus 266 ~~~------------~~~l~----~l~gWni---dS~K~s~~l~cpeIii~~~d~~~~~i~Dgl~~~~~~--lA~~~l~~ 324 (365)
T PF05677_consen 266 GPI------------GKLLI----KLLGWNI---DSAKNSEKLQCPEIIIYGVDSRSQLIGDGLFEPENC--LAAAFLDP 324 (365)
T ss_pred HHH------------HHHHH----HHhccCC---CchhhhccCCCCeEEEeccccchhhcccccCCcchh--hHHHhcCC
Confidence 111 11111 1223333 34466677889999999874 444444421 222221
Q ss_pred -------CCceEEEeCC-CCCCCChhhHHHHHHHHHHhhc
Q 016885 252 -------GDKNIIKFDG-DHNSSRPQFYYDSVSIFFYNVL 283 (381)
Q Consensus 252 -------~~~~~~~~~g-gH~~~~~~~~~~~i~~fl~~~l 283 (381)
..+..+.-.. .|..+-.+...+.+..-+.+++
T Consensus 325 ~~~~~~~~~Ki~i~~~~l~H~~~L~~~~~~~la~~I~~~~ 364 (365)
T PF05677_consen 325 PTAEKLSGKKIPIGERLLLHNEPLDDETIQALAEHILDHF 364 (365)
T ss_pred cccccccccceecccccccccccCChHHHHHHHHHHHhhc
Confidence 1222222222 6776655566666665555443
No 124
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=99.27 E-value=6.6e-12 Score=107.38 Aligned_cols=171 Identities=22% Similarity=0.236 Sum_probs=88.7
Q ss_pred CCcEEEEeCCCCCChhcHHHH----HHHhccCCcEEEEeCCCCC-----CCCC----------CCCcCCCcc-------h
Q 016885 65 PLPCVVYCHGNSGCRADANEA----AVILLPSNITLFTLDFSGS-----GLSD----------GDYVSLGWH-------E 118 (381)
Q Consensus 65 ~~p~vv~~HG~~~~~~~~~~~----~~~l~~~G~~vi~~D~~G~-----G~S~----------~~~~~~~~~-------~ 118 (381)
+++-||++||++.+...+... .+.|.+.++..+-+|-|-- |... .......|. .
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 82 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHE 82 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGG
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCccc
Confidence 578999999999999887644 3444443788888875532 1110 000011111 1
Q ss_pred hhHHHHHHHHHHhcCCC-C-cEEEEEEchhHHHHHHhhcc---------CCCccEEEeccCccCHHHHHHHHHHHhhhhC
Q 016885 119 KDDLKVVVSYLRGNKQT-S-RIGLWGRSMGAVTSLLYGAE---------DPSIAGMVLDSAFSDLFDLMLELVDVYKIRL 187 (381)
Q Consensus 119 ~~d~~~~i~~l~~~~~~-~-~i~l~G~S~GG~~a~~~a~~---------~p~v~~vi~~~~~~~~~~~~~~~~~~~~~~~ 187 (381)
..++.+.++++.+.... . =.+|+|+|+||.+|..++.. .+.++.+|++|++......
T Consensus 83 ~~~~~~sl~~l~~~i~~~GPfdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~------------ 150 (212)
T PF03959_consen 83 YEGLDESLDYLRDYIEENGPFDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD------------ 150 (212)
T ss_dssp G---HHHHHHHHHHHHHH---SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE-------------
T ss_pred ccCHHHHHHHHHHHHHhcCCeEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh------------
Confidence 34455555555443221 2 36899999999999887753 2348999999887532110
Q ss_pred CcccHHHHHHHHHHHhhhhhhccccccchhhcCCCCCCcEEEEeeCCCCccChHHHHHHHHHcCCCceEEEeCCCCCCCC
Q 016885 188 PKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDGDHNSSR 267 (381)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~ggH~~~~ 267 (381)
.. .. -...++++|+|.++|.+|.+++.+.++.+++.+.+...++..++||..+.
T Consensus 151 -----------------------~~--~~-~~~~~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~~~v~~h~gGH~vP~ 204 (212)
T PF03959_consen 151 -----------------------YQ--EL-YDEPKISIPTLHVIGENDPVVPPERSEALAEMFDPDARVIEHDGGHHVPR 204 (212)
T ss_dssp -----------------------GT--TT-T--TT---EEEEEEETT-SSS-HHHHHHHHHHHHHHEEEEEESSSSS---
T ss_pred -----------------------hh--hh-hccccCCCCeEEEEeCCCCCcchHHHHHHHHhccCCcEEEEECCCCcCcC
Confidence 00 00 12346789999999999999999999999998855368888999999886
Q ss_pred hhhHHH
Q 016885 268 PQFYYD 273 (381)
Q Consensus 268 ~~~~~~ 273 (381)
.....+
T Consensus 205 ~~~~~~ 210 (212)
T PF03959_consen 205 KKEDVD 210 (212)
T ss_dssp -HHHHH
T ss_pred Chhhcc
Confidence 554443
No 125
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.23 E-value=5.4e-11 Score=117.31 Aligned_cols=92 Identities=23% Similarity=0.278 Sum_probs=72.4
Q ss_pred CCcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCC----------CcCC-------------Ccc-hhh
Q 016885 65 PLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGD----------YVSL-------------GWH-EKD 120 (381)
Q Consensus 65 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~----------~~~~-------------~~~-~~~ 120 (381)
..|+||++||++++...|..+++.|+++||.|+++|+||||.|... .... .+. .+.
T Consensus 448 g~P~VVllHG~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~ 527 (792)
T TIGR03502 448 GWPVVIYQHGITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSIL 527 (792)
T ss_pred CCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHHH
Confidence 4689999999999999999999999999999999999999998432 0111 111 256
Q ss_pred HHHHHHHHHH------hc------CCCCcEEEEEEchhHHHHHHhhcc
Q 016885 121 DLKVVVSYLR------GN------KQTSRIGLWGRSMGAVTSLLYGAE 156 (381)
Q Consensus 121 d~~~~i~~l~------~~------~~~~~i~l~G~S~GG~~a~~~a~~ 156 (381)
|+..+...+. .. .+..+++++||||||.+++.++..
T Consensus 528 Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 528 DLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred HHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 7777777776 22 234799999999999999998875
No 126
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=99.20 E-value=1.7e-09 Score=101.16 Aligned_cols=191 Identities=12% Similarity=0.077 Sum_probs=111.7
Q ss_pred CCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCCh-hcHHHHHHHhccCC----cEEEEeCCCCCCCCCCCCcCCCcchh
Q 016885 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCR-ADANEAAVILLPSN----ITLFTLDFSGSGLSDGDYVSLGWHEK 119 (381)
Q Consensus 45 ~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~-~~~~~~~~~l~~~G----~~vi~~D~~G~G~S~~~~~~~~~~~~ 119 (381)
.-|....+++|.|.+.. .++.|+|+++||..... ......+..|.+.| ..++.+|..+.......... .....
T Consensus 189 ~Lg~~r~v~VY~P~~y~-~~~~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~~-~~~f~ 266 (411)
T PRK10439 189 RLGNSRRVWIYTTGDAA-PEERPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQELPC-NADFW 266 (411)
T ss_pred ccCCceEEEEEECCCCC-CCCCCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcccccccCCc-hHHHH
Confidence 34667788899997643 46789999999965221 12334455666555 34677775322111111111 10111
Q ss_pred hH-HHHHHHHHHhcCCC----CcEEEEEEchhHHHHHHhhccCCC-ccEEEeccCccCHHHHHHHHHHHhhhhCCcccHH
Q 016885 120 DD-LKVVVSYLRGNKQT----SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVK 193 (381)
Q Consensus 120 ~d-~~~~i~~l~~~~~~----~~i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (381)
.. ..+++-++.+++.. ++.+|+|+||||..|+.++.++|+ +.+++..+|..-... .... ...
T Consensus 267 ~~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ww~~-----------~~~~-~~~ 334 (411)
T PRK10439 267 LAVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSFWWPH-----------RGGQ-QEG 334 (411)
T ss_pred HHHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccceecCC-----------ccCC-chh
Confidence 12 24556677666443 678999999999999999999999 899999998641100 0000 000
Q ss_pred HHHHHHHHHhhhhhhccccccchhhcCCCCCCcEEEEeeCCCCccChHHHHHHHHHc---CCCceEEEeCCCCCCC
Q 016885 194 MAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAY---AGDKNIIKFDGDHNSS 266 (381)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~---~~~~~~~~~~ggH~~~ 266 (381)
.. .... .. .........+++-+|..|..+ ....+.+++.+ +-...+.+++|||...
T Consensus 335 ~l---~~~l-~~------------~~~~~~~lr~~i~~G~~E~~~-~~~~~~l~~~L~~~G~~~~~~~~~GGHd~~ 393 (411)
T PRK10439 335 VL---LEQL-KA------------GEVSARGLRIVLEAGRREPMI-MRANQALYAQLHPAGHSVFWRQVDGGHDAL 393 (411)
T ss_pred HH---HHHH-Hh------------cccCCCCceEEEeCCCCCchH-HHHHHHHHHHHHHCCCcEEEEECCCCcCHH
Confidence 00 0000 00 001112345888899888654 34566777666 3456788899999855
No 127
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=99.18 E-value=2.2e-10 Score=106.86 Aligned_cols=233 Identities=15% Similarity=0.206 Sum_probs=153.1
Q ss_pred cceeeEEEEEEcCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCCh--hcHHHHHHHhccCCcEEEEeCCCCCCCCCCC
Q 016885 33 RSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCR--ADANEAAVILLPSNITLFTLDFSGSGLSDGD 110 (381)
Q Consensus 33 ~~~~~~~v~~~~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~--~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~ 110 (381)
-+|..+....++.||++|.+.+.. ++.+.+ +.|++|+--|+-.-. ..|......+.++|...+..+.||-|+-...
T Consensus 390 ~~~~veQ~~atSkDGT~IPYFiv~-K~~~~d-~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~ 467 (648)
T COG1505 390 DNYEVEQFFATSKDGTRIPYFIVR-KGAKKD-ENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPE 467 (648)
T ss_pred cCceEEEEEEEcCCCccccEEEEe-cCCcCC-CCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHH
Confidence 356667777889999999999887 543344 788888766654322 2344555778889999999999998865432
Q ss_pred CcCCC-----cchhhHHHHHHHHHHhcCCC--CcEEEEEEchhHHHHHHhhccCCC-ccEEEeccCccCHHHHHHH----
Q 016885 111 YVSLG-----WHEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLE---- 178 (381)
Q Consensus 111 ~~~~~-----~~~~~d~~~~i~~l~~~~~~--~~i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~~~~~~~~---- 178 (381)
....+ ....+|+.++.+.|.++.-. +++++.|-|-||.++-.+..++|+ +.++++-.|..++.+.-.-
T Consensus 468 WH~Aa~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPllDMlRYh~l~aG~ 547 (648)
T COG1505 468 WHQAGMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLLDMLRYHLLTAGS 547 (648)
T ss_pred HHHHHhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccchhhhhhhcccccch
Confidence 22111 12268999999999887422 799999999999999999999999 8888887777665432110
Q ss_pred -HHHHhhhhCCcccHHHHHHHHHHHhhhhhhccccccchhhcCCC--CCCcEEEEeeCCCCccChHHHHHHHHHcCC--C
Q 016885 179 -LVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPK--TFIPALFGHASEDKFIRARHSDLIFNAYAG--D 253 (381)
Q Consensus 179 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~--~ 253 (381)
+...+ ..|..+.... + +..+++.+.++. .-.|+||..+.+|..|.+.+++.++.++.. .
T Consensus 548 sW~~EY--G~Pd~P~d~~--~------------l~~YSPy~nl~~g~kYP~~LITTs~~DDRVHPaHarKfaa~L~e~~~ 611 (648)
T COG1505 548 SWIAEY--GNPDDPEDRA--F------------LLAYSPYHNLKPGQKYPPTLITTSLHDDRVHPAHARKFAAKLQEVGA 611 (648)
T ss_pred hhHhhc--CCCCCHHHHH--H------------HHhcCchhcCCccccCCCeEEEcccccccccchHHHHHHHHHHhcCC
Confidence 11111 1222221111 1 112234444433 236999999999999999999999988832 2
Q ss_pred ceEEEe--CCCCCCCCh----hhHHHHHHHHHHhhc
Q 016885 254 KNIIKF--DGDHNSSRP----QFYYDSVSIFFYNVL 283 (381)
Q Consensus 254 ~~~~~~--~ggH~~~~~----~~~~~~i~~fl~~~l 283 (381)
..+... +|||....+ ......+..||.+.|
T Consensus 612 pv~~~e~t~gGH~g~~~~~~~A~~~a~~~afl~r~L 647 (648)
T COG1505 612 PVLLREETKGGHGGAAPTAEIARELADLLAFLLRTL 647 (648)
T ss_pred ceEEEeecCCcccCCCChHHHHHHHHHHHHHHHHhh
Confidence 233322 369985522 234445667887765
No 128
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=99.18 E-value=4.5e-10 Score=96.56 Aligned_cols=109 Identities=17% Similarity=0.258 Sum_probs=77.7
Q ss_pred CCCCCcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCCC------C---CCcCCCc----------------
Q 016885 62 EDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSD------G---DYVSLGW---------------- 116 (381)
Q Consensus 62 ~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~------~---~~~~~~~---------------- 116 (381)
++.+.|+|||.||+|+++..|..+.-.||++||.|.++++|.+-.+- . ......|
T Consensus 114 k~~k~PvvvFSHGLggsRt~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~ir 193 (399)
T KOG3847|consen 114 KNDKYPVVVFSHGLGGSRTLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIR 193 (399)
T ss_pred CCCCccEEEEecccccchhhHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEee
Confidence 36789999999999999999999999999999999999999753221 0 0000000
Q ss_pred -----chhhHHHHHHHHHHhc-----------------------CCCCcEEEEEEchhHHHHHHhhccCCCccEEEeccC
Q 016885 117 -----HEKDDLKVVVSYLRGN-----------------------KQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSA 168 (381)
Q Consensus 117 -----~~~~d~~~~i~~l~~~-----------------------~~~~~i~l~G~S~GG~~a~~~a~~~p~v~~vi~~~~ 168 (381)
..+.....+++-+++. ....++.++|||+||.+++...+.+.++++.|+..+
T Consensus 194 Neqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t~FrcaI~lD~ 273 (399)
T KOG3847|consen 194 NEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHTDFRCAIALDA 273 (399)
T ss_pred CHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccccceeeeeeeee
Confidence 0123334444444332 112578999999999999999988888888887766
Q ss_pred cc
Q 016885 169 FS 170 (381)
Q Consensus 169 ~~ 170 (381)
+.
T Consensus 274 WM 275 (399)
T KOG3847|consen 274 WM 275 (399)
T ss_pred ee
Confidence 53
No 129
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=99.16 E-value=2e-10 Score=93.32 Aligned_cols=180 Identities=15% Similarity=0.082 Sum_probs=120.3
Q ss_pred cEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchhhHHHHHHHHHHhcCCCCcEEEEEEchh
Q 016885 67 PCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMG 146 (381)
Q Consensus 67 p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~i~l~G~S~G 146 (381)
-.+|++-|-||-...-..+++.|+++|+.|+.+|-+-+-.+...+. +...|+.+++++..++-+.++++|+|+|+|
T Consensus 3 t~~v~~SGDgGw~~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~rtP~----~~a~Dl~~~i~~y~~~w~~~~vvLiGYSFG 78 (192)
T PF06057_consen 3 TLAVFFSGDGGWRDLDKQIAEALAKQGVPVVGVDSLRYFWSERTPE----QTAADLARIIRHYRARWGRKRVVLIGYSFG 78 (192)
T ss_pred EEEEEEeCCCCchhhhHHHHHHHHHCCCeEEEechHHHHhhhCCHH----HHHHHHHHHHHHHHHHhCCceEEEEeecCC
Confidence 3688889988877666789999999999999999876655544432 336899999999998878899999999999
Q ss_pred HHHHHHhhccCCC-----ccEEEeccCccCHHHHHHHHHHHhhhhCCcccHHHHHHHHHHHhhhhhhccccccchhhcCC
Q 016885 147 AVTSLLYGAEDPS-----IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAP 221 (381)
Q Consensus 147 G~~a~~~a~~~p~-----v~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (381)
+-+......+.|. |+.++++++.....-.. ....+....-+. ........+.
T Consensus 79 ADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~~dFei-hv~~wlg~~~~~----------------------~~~~~~pei~ 135 (192)
T PF06057_consen 79 ADVLPFIYNRLPAALRARVAQVVLLSPSTTADFEI-HVSGWLGMGGDD----------------------AAYPVIPEIA 135 (192)
T ss_pred chhHHHHHhhCCHHHHhheeEEEEeccCCcceEEE-EhhhhcCCCCCc----------------------ccCCchHHHH
Confidence 9888888877763 89999988865321000 000000000000 0012223444
Q ss_pred CCC-CcEEEEeeCCCCccChHHHHHHHHHc-CCCceEEEeCCCCCCC-ChhhHHHHHHHHHH
Q 016885 222 KTF-IPALFGHASEDKFIRARHSDLIFNAY-AGDKNIIKFDGDHNSS-RPQFYYDSVSIFFY 280 (381)
Q Consensus 222 ~i~-~Pvlii~G~~D~~v~~~~~~~l~~~~-~~~~~~~~~~ggH~~~-~~~~~~~~i~~fl~ 280 (381)
++. .|+++|+|.++.-.... .+ ....+.+..+|||++. .-+.+.+.|++-++
T Consensus 136 ~l~~~~v~CiyG~~E~d~~cp-------~l~~~~~~~i~lpGgHHfd~dy~~La~~Il~~l~ 190 (192)
T PF06057_consen 136 KLPPAPVQCIYGEDEDDSLCP-------SLRQPGVEVIALPGGHHFDGDYDALAKRILDALK 190 (192)
T ss_pred hCCCCeEEEEEcCCCCCCcCc-------cccCCCcEEEEcCCCcCCCCCHHHHHHHHHHHHh
Confidence 444 59999999987643211 12 2345788889999876 44566666665553
No 130
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=99.16 E-value=4.9e-09 Score=93.82 Aligned_cols=200 Identities=17% Similarity=0.226 Sum_probs=114.2
Q ss_pred HHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchhhHHHHHHHHHHhcCC------CCcEEEEEEchhHHHHHHhhccC
Q 016885 84 EAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQ------TSRIGLWGRSMGAVTSLLYGAED 157 (381)
Q Consensus 84 ~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~i~~l~~~~~------~~~i~l~G~S~GG~~a~~~a~~~ 157 (381)
.++..++++||.|+++||.|.|.. ...+......+.+.++..++... ..+++++|||.||..++.++...
T Consensus 17 ~~l~~~L~~GyaVv~pDY~Glg~~----y~~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l~ 92 (290)
T PF03583_consen 17 PFLAAWLARGYAVVAPDYEGLGTP----YLNGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAELA 92 (290)
T ss_pred HHHHHHHHCCCEEEecCCCCCCCc----ccCcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHHh
Confidence 455677788999999999999871 11222333344444444443322 26899999999999998766442
Q ss_pred ----CC----ccEEEeccCccCHHHHHHH------------HHHHhhhhCCccc--HHH-----HHHHH----HHHhhh-
Q 016885 158 ----PS----IAGMVLDSAFSDLFDLMLE------------LVDVYKIRLPKFT--VKM-----AVQYM----RRVIQK- 205 (381)
Q Consensus 158 ----p~----v~~vi~~~~~~~~~~~~~~------------~~~~~~~~~~~~~--~~~-----~~~~~----~~~~~~- 205 (381)
|+ +.+.++.++..++...+.. .........|.+. ... ....+ ..+...
T Consensus 93 ~~YApeL~~~l~Gaa~gg~~~dl~~~~~~~~~~~~~g~~~~~l~gl~~~yP~l~~~~~~~l~~~g~~~~~~~~~~c~~~~ 172 (290)
T PF03583_consen 93 PSYAPELNRDLVGAAAGGPPADLAALLRALNGGPFAGLVPYALLGLAAAYPELDELLDSYLTPEGRALLDDARTRCLADI 172 (290)
T ss_pred HHhCcccccceeEEeccCCccCHHHHHhccCCCccHhHHHHHHHHHHHhCccHHHHHHHHhhHHHHHHHHHHHhhhHHHH
Confidence 32 5677777777766554321 1111112233322 100 00000 000000
Q ss_pred ---hhhcc-------c--cccc---------hh--hc-----CCCCCCcEEEEeeCCCCccChHHHHHHHHHc---C-CC
Q 016885 206 ---KAKFD-------I--MDLN---------CL--KL-----APKTFIPALFGHASEDKFIRARHSDLIFNAY---A-GD 253 (381)
Q Consensus 206 ---~~~~~-------~--~~~~---------~~--~~-----~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~---~-~~ 253 (381)
..... . ...+ .+ .. -...+.|+++.||..|.++|+.....+.+.+ + ..
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~ 252 (290)
T PF03583_consen 173 VAEYAFQDLFTGDTRYFKPGADLLADPAFRRALAENSLGMGGDWTPTVPVLIYQGTADEVVPPADTDALVAKWCAAGGAD 252 (290)
T ss_pred HHHhhhccccccchhccCChhhhhhhHHHHHHHHHhhccccCCCCCCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCC
Confidence 00000 0 0000 00 11 1223689999999999999999999998877 4 35
Q ss_pred ceEEEeCC-CCCCCChhhHHHHHHHHHHhhcCCCCC
Q 016885 254 KNIIKFDG-DHNSSRPQFYYDSVSIFFYNVLHPPQI 288 (381)
Q Consensus 254 ~~~~~~~g-gH~~~~~~~~~~~i~~fl~~~l~~~~~ 288 (381)
.+++.+++ +|..... .-......||..++.....
T Consensus 253 V~~~~~~~~~H~~~~~-~~~~~a~~Wl~~rf~G~~~ 287 (290)
T PF03583_consen 253 VEYVRYPGGGHLGAAF-ASAPDALAWLDDRFAGKPA 287 (290)
T ss_pred EEEEecCCCChhhhhh-cCcHHHHHHHHHHHCCCCC
Confidence 67777776 8885422 2345667999999886553
No 131
>PRK04940 hypothetical protein; Provisional
Probab=99.15 E-value=3.1e-09 Score=86.26 Aligned_cols=117 Identities=12% Similarity=-0.013 Sum_probs=77.2
Q ss_pred CcEEEEEEchhHHHHHHhhccCCCccEEEeccCccCHHHHHHHHHHHhhhhCCcccHHHHHHHHHHHhhhhhhccccccc
Q 016885 136 SRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLN 215 (381)
Q Consensus 136 ~~i~l~G~S~GG~~a~~~a~~~p~v~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (381)
+++.|+|.|+||+.|..++.++. + ..|+++|...+...+......... .. .+....+.
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g-~-~aVLiNPAv~P~~~L~~~ig~~~~-y~--------~~~~~h~~----------- 117 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCG-I-RQVIFNPNLFPEENMEGKIDRPEE-YA--------DIATKCVT----------- 117 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHC-C-CEEEECCCCChHHHHHHHhCCCcc-hh--------hhhHHHHH-----------
Confidence 57999999999999999999876 4 455568888776655544321100 11 11111111
Q ss_pred hhhcCC-CCCCcEEEEeeCCCCccChHHHHHHHHHcCCCceEEEeCC-CCCCCChhhHHHHHHHHHH
Q 016885 216 CLKLAP-KTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSSRPQFYYDSVSIFFY 280 (381)
Q Consensus 216 ~~~~~~-~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~g-gH~~~~~~~~~~~i~~fl~ 280 (381)
.++ +-.-..+++..+.|++.+...+.+.+.. ...+.+.+| +|.+..-+++...|.+|+.
T Consensus 118 ---eL~~~~p~r~~vllq~gDEvLDyr~a~~~y~~---~y~~~v~~GGdH~f~~fe~~l~~I~~F~~ 178 (180)
T PRK04940 118 ---NFREKNRDRCLVILSRNDEVLDSQRTAEELHP---YYEIVWDEEQTHKFKNISPHLQRIKAFKT 178 (180)
T ss_pred ---HhhhcCcccEEEEEeCCCcccCHHHHHHHhcc---CceEEEECCCCCCCCCHHHHHHHHHHHHh
Confidence 111 1122459999999999998877655533 324666666 7888888999999999984
No 132
>KOG3101 consensus Esterase D [General function prediction only]
Probab=99.15 E-value=9.7e-10 Score=89.23 Aligned_cols=221 Identities=16% Similarity=0.177 Sum_probs=122.3
Q ss_pred EcCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhcHH---HHHHHhccCCcEEEEeCCC--CC---CCCCCCCcCC
Q 016885 43 RNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADAN---EAAVILLPSNITLFTLDFS--GS---GLSDGDYVSL 114 (381)
Q Consensus 43 ~~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~---~~~~~l~~~G~~vi~~D~~--G~---G~S~~~~~~~ 114 (381)
...-+..+...+|+|...+.+++.|++.++.|+..+.+.+. .+-+...++|+.|+.+|-. |. |+.+......
T Consensus 21 S~tl~c~Mtf~vylPp~a~~~k~~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~ 100 (283)
T KOG3101|consen 21 SNTLKCSMTFGVYLPPDAPRGKRCPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQ 100 (283)
T ss_pred ccccccceEEEEecCCCcccCCcCceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccC
Confidence 33445778888999988777778999999999998877663 2334556679999999954 43 2222100000
Q ss_pred -----------Ccch-hhHHHHHHHHHHhcC-------CCCcEEEEEEchhHHHHHHhhccCCC-ccEEEeccCccCHHH
Q 016885 115 -----------GWHE-KDDLKVVVSYLRGNK-------QTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFD 174 (381)
Q Consensus 115 -----------~~~~-~~d~~~~i~~l~~~~-------~~~~i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~~~~ 174 (381)
.|.. .....-+++.|.+.. +..+++|.||||||.-|+..+.+++. .+.+-..+|..++..
T Consensus 101 GAGFYvnAt~epw~~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP~~ 180 (283)
T KOG3101|consen 101 GAGFYVNATQEPWAKHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNPIN 180 (283)
T ss_pred CceeEEecccchHhhhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCccc
Confidence 0110 111111222222211 22679999999999999999999987 677766666655432
Q ss_pred HHHHHHHHhhhhCCcccHHHHHHHHHHHhhhhhhccccc-cchhhcCCCCCCcEEEEeeCCCCccChH-HHHHHHHHcC-
Q 016885 175 LMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMD-LNCLKLAPKTFIPALFGHASEDKFIRAR-HSDLIFNAYA- 251 (381)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~Pvlii~G~~D~~v~~~-~~~~l~~~~~- 251 (381)
.. +.. +....++.. ....+...+ .......+....-+||=.|..|.+..-. --+.+.++..
T Consensus 181 cp-WGq------------KAf~gYLG~---~ka~W~~yDat~lik~y~~~~~~ilIdqG~~D~Fl~~qLlPe~l~~a~~~ 244 (283)
T KOG3101|consen 181 CP-WGQ------------KAFTGYLGD---NKAQWEAYDATHLIKNYRGVGDDILIDQGAADNFLAEQLLPENLLEACKA 244 (283)
T ss_pred Cc-chH------------HHhhcccCC---ChHHHhhcchHHHHHhcCCCCccEEEecCccchhhhhhcChHHHHHHhhc
Confidence 10 000 000001100 000111111 1123445555667899999999988622 2233334332
Q ss_pred ---CCceEEEeCC-CCCCCChhhHHHHHHHHH
Q 016885 252 ---GDKNIIKFDG-DHNSSRPQFYYDSVSIFF 279 (381)
Q Consensus 252 ---~~~~~~~~~g-gH~~~~~~~~~~~i~~fl 279 (381)
....+...+| +|..-.-..+...-+++-
T Consensus 245 ~~~~~v~~r~~~gyDHSYyfIaTFv~dHi~hH 276 (283)
T KOG3101|consen 245 TWQAPVVFRLQEGYDHSYYFIATFVADHIEHH 276 (283)
T ss_pred cccccEEEEeecCCCcceeeehhhhHHHHHHH
Confidence 2334555577 888654444444433433
No 133
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.14 E-value=1.1e-08 Score=90.31 Aligned_cols=105 Identities=18% Similarity=0.234 Sum_probs=77.0
Q ss_pred CcEEEEeCCCCCChhcHHHHHHHhccC---CcEEEEeCCCCCCCCCCCC----cCCCcchhhHHHHHHHHH---HhcC--
Q 016885 66 LPCVVYCHGNSGCRADANEAAVILLPS---NITLFTLDFSGSGLSDGDY----VSLGWHEKDDLKVVVSYL---RGNK-- 133 (381)
Q Consensus 66 ~p~vv~~HG~~~~~~~~~~~~~~l~~~---G~~vi~~D~~G~G~S~~~~----~~~~~~~~~d~~~~i~~l---~~~~-- 133 (381)
+..+|+++|+.|-.+.|..+++.|.++ .+.|+++.+.||-.+.... ....+.-.+.+...++++ ....
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~ 81 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNK 81 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcC
Confidence 578999999999999999888777744 7999999999996655431 111111123344344444 3332
Q ss_pred CCCcEEEEEEchhHHHHHHhhccCC----CccEEEeccCcc
Q 016885 134 QTSRIGLWGRSMGAVTSLLYGAEDP----SIAGMVLDSAFS 170 (381)
Q Consensus 134 ~~~~i~l~G~S~GG~~a~~~a~~~p----~v~~vi~~~~~~ 170 (381)
...+++++|||.|+++++.++.+.+ +|.+++++.|..
T Consensus 82 ~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi 122 (266)
T PF10230_consen 82 PNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTI 122 (266)
T ss_pred CCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcc
Confidence 3478999999999999999999998 388888887764
No 134
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.14 E-value=2.1e-10 Score=92.68 Aligned_cols=187 Identities=13% Similarity=0.053 Sum_probs=126.9
Q ss_pred EEEEEEeecCCCCCCCCCcEEEEeCCCC---CChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchhhHHHHH
Q 016885 49 VLQCSHYMPSPFPEDTPLPCVVYCHGNS---GCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVV 125 (381)
Q Consensus 49 ~l~~~~~~P~~~~~~~~~p~vv~~HG~~---~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~ 125 (381)
.-...+|.| ....++.||+||+- |+.......+..+.++||+|..+++- .+.....- .+.+.++...
T Consensus 55 ~q~VDIwg~-----~~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY~---l~~q~htL--~qt~~~~~~g 124 (270)
T KOG4627|consen 55 RQLVDIWGS-----TNQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGYN---LCPQVHTL--EQTMTQFTHG 124 (270)
T ss_pred ceEEEEecC-----CCCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEeccC---cCcccccH--HHHHHHHHHH
Confidence 444568876 35679999999986 45555556777888899999988763 33322110 1236788888
Q ss_pred HHHHHhcCCC-CcEEEEEEchhHHHHHHhhcc--CCCccEEEeccCccCHHHHHHHHHHHhhhhCCcccHHHHHHHHHHH
Q 016885 126 VSYLRGNKQT-SRIGLWGRSMGAVTSLLYGAE--DPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRV 202 (381)
Q Consensus 126 i~~l~~~~~~-~~i~l~G~S~GG~~a~~~a~~--~p~v~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (381)
++|+.+.... +.+.+-|||.|+.+++.+..+ .|+|.|+++.|+...+.++...-.. ..-.+..... .
T Consensus 125 v~filk~~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~EL~~te~g----~dlgLt~~~a----e-- 194 (270)
T KOG4627|consen 125 VNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLRELSNTESG----NDLGLTERNA----E-- 194 (270)
T ss_pred HHHHHHhcccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHHHHhCCccc----cccCcccchh----h--
Confidence 8999887765 778888999999999988876 4559999999998876554321000 0000000000 0
Q ss_pred hhhhhhccccccchhhcCCCCCCcEEEEeeCCCCccChHHHHHHHHHcCCCceEEEeCC-CCCC
Q 016885 203 IQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNS 265 (381)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~g-gH~~ 265 (381)
. ...-...+..++.|+|++.|.+|.---.++.+.+...++.. .+..|++ +|+.
T Consensus 195 --------~-~Scdl~~~~~v~~~ilVv~~~~espklieQnrdf~~q~~~a-~~~~f~n~~hy~ 248 (270)
T KOG4627|consen 195 --------S-VSCDLWEYTDVTVWILVVAAEHESPKLIEQNRDFADQLRKA-SFTLFKNYDHYD 248 (270)
T ss_pred --------h-cCccHHHhcCceeeeeEeeecccCcHHHHhhhhHHHHhhhc-ceeecCCcchhh
Confidence 0 00112345567899999999999877778889998888664 7888888 9984
No 135
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=99.13 E-value=1.5e-09 Score=102.61 Aligned_cols=209 Identities=16% Similarity=0.152 Sum_probs=140.2
Q ss_pred cceeeEEEEEEcCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChh--cHHHHHHHhccCCcEEEEeCCCCCCCCCCC
Q 016885 33 RSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRA--DANEAAVILLPSNITLFTLDFSGSGLSDGD 110 (381)
Q Consensus 33 ~~~~~~~v~~~~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~--~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~ 110 (381)
.+|..+.+..+..||.++...+.+-+.....++.|++|+.-|.-|..- .|....-.|.++||.-.....||-|.-...
T Consensus 415 ~~Y~s~riwa~a~dgv~VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~ 494 (682)
T COG1770 415 EDYVSRRIWATADDGVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRA 494 (682)
T ss_pred hHeEEEEEEEEcCCCcEeeEEEEEecccCCCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChH
Confidence 568888998888999999999988765556788999999888766443 344445578899998888889998766532
Q ss_pred CcCC-----CcchhhHHHHHHHHHHhcCCC--CcEEEEEEchhHHHHHHhhccCCC-ccEEEeccCccCHHHHHHHHHHH
Q 016885 111 YVSL-----GWHEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDV 182 (381)
Q Consensus 111 ~~~~-----~~~~~~d~~~~i~~l~~~~~~--~~i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~~~~~~~~~~~~ 182 (381)
.... .+....|+.++.++|.+..-. ++|+++|-|.||++...++...|+ ++++|+..|+++....+..-
T Consensus 495 WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDvltTMlD~--- 571 (682)
T COG1770 495 WYEDGKLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDVLTTMLDP--- 571 (682)
T ss_pred HHHhhhhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccchhhhhcCC---
Confidence 2211 123468999999999987543 789999999999999999999999 99999999999876544311
Q ss_pred hhhhCCcccHHHHHHHHHHHhhhhhhcc-ccccchhhcCCC-CCCcEEEEeeCCCCccChHHHHHHHHHc
Q 016885 183 YKIRLPKFTVKMAVQYMRRVIQKKAKFD-IMDLNCLKLAPK-TFIPALFGHASEDKFIRARHSDLIFNAY 250 (381)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-i~~Pvlii~G~~D~~v~~~~~~~l~~~~ 250 (381)
.+|.-. ....+|.... ....++ +...++...+.. --.|+|++.|.+|+.|..-...+...++
T Consensus 572 ---slPLT~-~E~~EWGNP~--d~e~y~yikSYSPYdNV~a~~YP~ilv~~Gl~D~rV~YwEpAKWvAkL 635 (682)
T COG1770 572 ---SLPLTV-TEWDEWGNPL--DPEYYDYIKSYSPYDNVEAQPYPAILVTTGLNDPRVQYWEPAKWVAKL 635 (682)
T ss_pred ---CCCCCc-cchhhhCCcC--CHHHHHHHhhcCchhccccCCCCceEEEccccCCccccchHHHHHHHH
Confidence 111110 0111111111 000000 111223233322 2368899999999999766555555544
No 136
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=99.12 E-value=1.8e-10 Score=101.61 Aligned_cols=126 Identities=19% Similarity=0.271 Sum_probs=81.4
Q ss_pred CeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhcH--HHHHHHhccCC----cEEEEeCCCCCCCCCCC---------C
Q 016885 47 GHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADA--NEAAVILLPSN----ITLFTLDFSGSGLSDGD---------Y 111 (381)
Q Consensus 47 g~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~--~~~~~~l~~~G----~~vi~~D~~G~G~S~~~---------~ 111 (381)
|......+|+|.+....++.|+|+++||.......+ ...+..+.+.| ..+++++..+.+..... .
T Consensus 5 g~~~~~~VylP~~y~~~~~~PvlylldG~~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~ 84 (251)
T PF00756_consen 5 GRDRRVWVYLPPGYDPSKPYPVLYLLDGQSGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRR 84 (251)
T ss_dssp TEEEEEEEEECTTGGTTTTEEEEEEESHTTHHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCB
T ss_pred CCeEEEEEEECCCCCCCCCCEEEEEccCCccccccchHHHHHHHHHHhCCCCceEEEEEecccccccccccccccccccc
Confidence 567778899998765678899999999972222211 22333344433 45666666554411100 0
Q ss_pred -cCCCcc-hhh--HHHHHHHHHHhcCCC--CcEEEEEEchhHHHHHHhhccCCC-ccEEEeccCccCH
Q 016885 112 -VSLGWH-EKD--DLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDL 172 (381)
Q Consensus 112 -~~~~~~-~~~--d~~~~i~~l~~~~~~--~~i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~~ 172 (381)
...+.. ... -..+++.++.++... ++.+|+|+||||+.|+.++.++|+ +.++++.+|....
T Consensus 85 ~~~~~~~~~~~~~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~ 152 (251)
T PF00756_consen 85 ADDSGGGDAYETFLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDP 152 (251)
T ss_dssp CTSTTTHHHHHHHHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESET
T ss_pred cccCCCCcccceehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCccccc
Confidence 001111 111 234677788887765 338999999999999999999999 9999999988554
No 137
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=99.12 E-value=1.5e-09 Score=101.95 Aligned_cols=244 Identities=17% Similarity=0.176 Sum_probs=152.4
Q ss_pred cceeeEEEEEEcCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhc--HHHHHHHhccCCcEEEEeCCCCCCCCCCC
Q 016885 33 RSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD--ANEAAVILLPSNITLFTLDFSGSGLSDGD 110 (381)
Q Consensus 33 ~~~~~~~v~~~~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~--~~~~~~~l~~~G~~vi~~D~~G~G~S~~~ 110 (381)
..|..+.+.+++.||+.+...+.+-+.....+++|++|+.+|.-+-.-. |..-...|.++|+.....|.||-|.-...
T Consensus 437 s~y~~~r~~~~SkDGt~VPM~Iv~kk~~k~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~ 516 (712)
T KOG2237|consen 437 SDYVVERIEVSSKDGTKVPMFIVYKKDIKLDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQ 516 (712)
T ss_pred cceEEEEEEEecCCCCccceEEEEechhhhcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccc
Confidence 3477888999999999999988875544456789999999887754332 33333457779999999999998866533
Q ss_pred CcCCC-----cchhhHHHHHHHHHHhcCCC--CcEEEEEEchhHHHHHHhhccCCC-ccEEEeccCccCHHHHHHHHHHH
Q 016885 111 YVSLG-----WHEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDV 182 (381)
Q Consensus 111 ~~~~~-----~~~~~d~~~~i~~l~~~~~~--~~i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~~~~~~~~~~~~ 182 (381)
+...+ ....+|+.+..+||.++.-. .+..+.|.|.||.++..+...+|+ +.++|+-.|+.+....+...
T Consensus 517 WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmDvL~t~~~t--- 593 (712)
T KOG2237|consen 517 WHKDGRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMDVLNTHKDT--- 593 (712)
T ss_pred hhhccchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCcceehhhhhccC---
Confidence 32222 13379999999999998543 889999999999999999999999 89999988988765433210
Q ss_pred hhhhCCcccHHHHHHHHHHHhhhhhhccccccchhhcCCCC--CCcEEEEeeCCCCccChHHHHHHHHHcC---------
Q 016885 183 YKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKT--FIPALFGHASEDKFIRARHSDLIFNAYA--------- 251 (381)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~Pvlii~G~~D~~v~~~~~~~l~~~~~--------- 251 (381)
..|...... ..+-... .......+..+.+.+...+- -.-+|+..+.+|..|.+.++..+.+++.
T Consensus 594 ---ilplt~sd~-ee~g~p~-~~~~~~~i~~y~pv~~i~~q~~YPS~lvtta~hD~RV~~~~~~K~vAklre~~~~~~~q 668 (712)
T KOG2237|consen 594 ---ILPLTTSDY-EEWGNPE-DFEDLIKISPYSPVDNIKKQVQYPSMLVTTADHDDRVGPLESLKWVAKLREATCDSLKQ 668 (712)
T ss_pred ---ccccchhhh-cccCChh-hhhhhheecccCccCCCchhccCcceEEeeccCCCcccccchHHHHHHHHHHhhcchhc
Confidence 011100000 0000000 00001112222222222211 1357889999988887766666555541
Q ss_pred -CCceEEEeC-CCCCCCChh----hHHHHHHHHHHhhcC
Q 016885 252 -GDKNIIKFD-GDHNSSRPQ----FYYDSVSIFFYNVLH 284 (381)
Q Consensus 252 -~~~~~~~~~-ggH~~~~~~----~~~~~i~~fl~~~l~ 284 (381)
++..+.+.. +||....+. +-.....+||.+.+.
T Consensus 669 ~~pvll~i~~~agH~~~~~~~k~~~E~a~~yaFl~K~~~ 707 (712)
T KOG2237|consen 669 TNPVLLRIETKAGHGAEKPRFKQIEEAAFRYAFLAKMLN 707 (712)
T ss_pred CCCEEEEEecCCccccCCchHHHHHHHHHHHHHHHHHhc
Confidence 122233333 599965331 222334567776654
No 138
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=99.11 E-value=9.7e-10 Score=98.96 Aligned_cols=196 Identities=14% Similarity=0.057 Sum_probs=126.5
Q ss_pred CCcEEEEeCCCCCChhc-----HHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcch--hhHHHHHHHHHHhcCCCCc
Q 016885 65 PLPCVVYCHGNSGCRAD-----ANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE--KDDLKVVVSYLRGNKQTSR 137 (381)
Q Consensus 65 ~~p~vv~~HG~~~~~~~-----~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~--~~d~~~~i~~l~~~~~~~~ 137 (381)
..+.++++|.+-..-.. -..++..|.++|..|+.+++++-..+.+ ..++.+ .+.+..+++.+++..+.++
T Consensus 106 ~~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~---~~~~edYi~e~l~~aid~v~~itg~~~ 182 (445)
T COG3243 106 LKRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLA---AKNLEDYILEGLSEAIDTVKDITGQKD 182 (445)
T ss_pred CCCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhh---hccHHHHHHHHHHHHHHHHHHHhCccc
Confidence 46778888887643322 2478899999999999999997665554 223332 4788899999999888899
Q ss_pred EEEEEEchhHHHHHHhhccCCC--ccEEEeccCccCHHH-----------HHHHHHHHh--hhhCCccc-----------
Q 016885 138 IGLWGRSMGAVTSLLYGAEDPS--IAGMVLDSAFSDLFD-----------LMLELVDVY--KIRLPKFT----------- 191 (381)
Q Consensus 138 i~l~G~S~GG~~a~~~a~~~p~--v~~vi~~~~~~~~~~-----------~~~~~~~~~--~~~~~~~~----------- 191 (381)
|.++|+|.||.++..+++..+. |+.+.+.....++.. .+....... ...+|...
T Consensus 183 InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~~g~l~if~n~~~~~~~~~~i~~~g~lpg~~ma~~F~mLrpn 262 (445)
T COG3243 183 INLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSHAGDLGIFANEATIEALDADIVQKGILPGWYMAIVFFLLRPN 262 (445)
T ss_pred cceeeEecchHHHHHHHHhhhhcccccceeeecchhhccccccccccCHHHHHHHHhhhhhccCCChHHHHHHHHhcCcc
Confidence 9999999999999988887764 777776554443221 001000000 00111111
Q ss_pred ---------------------------------HHHHHHHHHHHhhhhhhcccccc---chhhcCCCCCCcEEEEeeCCC
Q 016885 192 ---------------------------------VKMAVQYMRRVIQKKAKFDIMDL---NCLKLAPKTFIPALFGHASED 235 (381)
Q Consensus 192 ---------------------------------~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~~Pvlii~G~~D 235 (381)
.....++++.......... ..+ ...-.+.+|+||++++.|+.|
T Consensus 263 dliw~~fV~nyl~ge~pl~fdllyWn~dst~~~~~~~~~~Lrn~y~~N~l~~-g~~~v~G~~VdL~~It~pvy~~a~~~D 341 (445)
T COG3243 263 DLIWNYFVNNYLDGEQPLPFDLLYWNADSTRLPGAAHSEYLRNFYLENRLIR-GGLEVSGTMVDLGDITCPVYNLAAEED 341 (445)
T ss_pred ccchHHHHHHhcCCCCCCchhHHHhhCCCccCchHHHHHHHHHHHHhChhhc-cceEECCEEechhhcccceEEEeeccc
Confidence 1111111111111110000 000 111345679999999999999
Q ss_pred CccChHHHHHHHHHcCCCceEEEeCCCCC
Q 016885 236 KFIRARHSDLIFNAYAGDKNIIKFDGDHN 264 (381)
Q Consensus 236 ~~v~~~~~~~l~~~~~~~~~~~~~~ggH~ 264 (381)
.++|.+......+.+++.++++..++||.
T Consensus 342 hI~P~~Sv~~g~~l~~g~~~f~l~~sGHI 370 (445)
T COG3243 342 HIAPWSSVYLGARLLGGEVTFVLSRSGHI 370 (445)
T ss_pred ccCCHHHHHHHHHhcCCceEEEEecCceE
Confidence 99999999999999988888888899998
No 139
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=99.07 E-value=2.4e-09 Score=93.03 Aligned_cols=201 Identities=17% Similarity=0.135 Sum_probs=117.4
Q ss_pred CCCcEEEEeCCCCCChhcHHHHHHHhc-cCCc----EEEEeCCCCC----CCCCCC------------CcCCC-cchhhH
Q 016885 64 TPLPCVVYCHGNSGCRADANEAAVILL-PSNI----TLFTLDFSGS----GLSDGD------------YVSLG-WHEKDD 121 (381)
Q Consensus 64 ~~~p~vv~~HG~~~~~~~~~~~~~~l~-~~G~----~vi~~D~~G~----G~S~~~------------~~~~~-~~~~~d 121 (381)
...-+.||+||++|+...+..++..+. +.|. .++.++--|+ |.-... ..... .....-
T Consensus 9 ~~~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~w 88 (255)
T PF06028_consen 9 QSTTPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKW 88 (255)
T ss_dssp -S-EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHH
T ss_pred cCCCcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHH
Confidence 445688999999999999999999997 6553 3455555554 321111 00000 123677
Q ss_pred HHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhhccC------CCccEEEeccCccCHHHHHHHHH--HHhhhhCCcccHH
Q 016885 122 LKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAED------PSIAGMVLDSAFSDLFDLMLELV--DVYKIRLPKFTVK 193 (381)
Q Consensus 122 ~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~------p~v~~vi~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 193 (381)
+..++.+|.++++..++-++||||||..++.++..+ |.+..+|.++++++......... ......-|.....
T Consensus 89 l~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~~~~~~~~~gp~~~~~ 168 (255)
T PF06028_consen 89 LKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQNQNDLNKNGPKSMTP 168 (255)
T ss_dssp HHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-TTTT-CSTT-BSS--H
T ss_pred HHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccchhhhhcccCCcccCH
Confidence 889999999999999999999999999999988764 45788888887665321100000 0000000211111
Q ss_pred HHHHHHHHHhhhhhhccccccchhhcCCCCCCcEEEEeeC------CCCccChHHHHHHHHHcCC---CceEEEeCC---
Q 016885 194 MAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHAS------EDKFIRARHSDLIFNAYAG---DKNIIKFDG--- 261 (381)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~------~D~~v~~~~~~~l~~~~~~---~~~~~~~~g--- 261 (381)
....++... + ..++ -++.+|-|.|. .|-.||...+..+.-.+.+ ..+..++.|
T Consensus 169 ~y~~l~~~~---~-----------~~~p-~~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~~~~Y~e~~v~G~~a 233 (255)
T PF06028_consen 169 MYQDLLKNR---R-----------KNFP-KNIQVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNRAKSYQEKTVTGKDA 233 (255)
T ss_dssp HHHHHHHTH---G-----------GGST-TT-EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTTSSEEEEEEEESGGG
T ss_pred HHHHHHHHH---H-----------hhCC-CCeEEEEEecccCCCCCCCeEEeHHHHHHHHHHhhcccCceEEEEEECCCC
Confidence 122111110 0 1111 24789999998 8999999998888888854 223344444
Q ss_pred CCCCC-ChhhHHHHHHHHH
Q 016885 262 DHNSS-RPQFYYDSVSIFF 279 (381)
Q Consensus 262 gH~~~-~~~~~~~~i~~fl 279 (381)
.|... +..++.+.|.+||
T Consensus 234 ~HS~LheN~~V~~~I~~FL 252 (255)
T PF06028_consen 234 QHSQLHENPQVDKLIIQFL 252 (255)
T ss_dssp SCCGGGCCHHHHHHHHHHH
T ss_pred ccccCCCCHHHHHHHHHHh
Confidence 57733 5668888888887
No 140
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.05 E-value=3.2e-08 Score=86.01 Aligned_cols=232 Identities=11% Similarity=0.114 Sum_probs=123.8
Q ss_pred EEcCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhc-HHHH-----HHHhccCCcEEEEeCCCCCCCCCCC-CcCC
Q 016885 42 IRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD-ANEA-----AVILLPSNITLFTLDFSGSGLSDGD-YVSL 114 (381)
Q Consensus 42 ~~~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~-~~~~-----~~~l~~~G~~vi~~D~~G~G~S~~~-~~~~ 114 (381)
+.+.-| .+.+.++-.. ++.+|++|-.|-.|-+... |..+ .+.+.+ .|.++-+|.||+..-... +...
T Consensus 4 v~t~~G-~v~V~v~G~~----~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~-~f~i~Hi~aPGqe~ga~~~p~~y 77 (283)
T PF03096_consen 4 VETPYG-SVHVTVQGDP----KGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQ-NFCIYHIDAPGQEEGAATLPEGY 77 (283)
T ss_dssp EEETTE-EEEEEEESS------TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHT-TSEEEEEE-TTTSTT-----TT-
T ss_pred eccCce-EEEEEEEecC----CCCCceEEEeccccccchHHHHHHhcchhHHHHhh-ceEEEEEeCCCCCCCcccccccc
Confidence 344444 5666666321 2369999999999977665 4443 344555 599999999999653321 2222
Q ss_pred CcchhhHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhhccCCC-ccEEEeccCccCHHHHHHHHHHHhhh------hC
Q 016885 115 GWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKI------RL 187 (381)
Q Consensus 115 ~~~~~~d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~~~~~~~~~~~~~~~------~~ 187 (381)
.+-.++++.+.+..+.+..+.+.++-+|--.|+++-.++|..+|+ |.|+|++++......+..+....... .+
T Consensus 78 ~yPsmd~LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~gw~Ew~~~K~~~~~L~~~gm 157 (283)
T PF03096_consen 78 QYPSMDQLAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAGWMEWFYQKLSSWLLYSYGM 157 (283)
T ss_dssp ----HHHHHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---HHHHHHHHHH-------CT
T ss_pred cccCHHHHHHHHHHHHHhCCccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCccHHHHHHHHHhccccccccc
Confidence 222345555555555555588999999999999999999999998 99999999887655554443333221 11
Q ss_pred CcccHHH----------------HHHHHHHHhhhhhh-cc--------ccccchhhcCCCCCCcEEEEeeCCCCccChHH
Q 016885 188 PKFTVKM----------------AVQYMRRVIQKKAK-FD--------IMDLNCLKLAPKTFIPALFGHASEDKFIRARH 242 (381)
Q Consensus 188 ~~~~~~~----------------~~~~~~~~~~~~~~-~~--------~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~ 242 (381)
....... ..+..+..+..... .+ ..+.+.....+...||+|++.|...+.. +.
T Consensus 158 t~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvvG~~Sp~~--~~ 235 (283)
T PF03096_consen 158 TSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSLGCPVLLVVGDNSPHV--DD 235 (283)
T ss_dssp TS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTCCS-EEEEEETTSTTH--HH
T ss_pred ccchHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCCCCCeEEEEecCCcch--hh
Confidence 1111110 01111111111000 00 1112333445566799999999998876 67
Q ss_pred HHHHHHHcCC-CceEEEeCC-CCC--CCChhhHHHHHHHHHHh
Q 016885 243 SDLIFNAYAG-DKNIIKFDG-DHN--SSRPQFYYDSVSIFFYN 281 (381)
Q Consensus 243 ~~~l~~~~~~-~~~~~~~~g-gH~--~~~~~~~~~~i~~fl~~ 281 (381)
+..+..++.+ ..+++.+++ |=. ...|..+.+.+.=|++.
T Consensus 236 vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~lFlQG 278 (283)
T PF03096_consen 236 VVEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQG 278 (283)
T ss_dssp HHHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHHHHHHH
T ss_pred HHHHHhhcCcccceEEEecccCCcccccCcHHHHHHHHHHHcc
Confidence 7888888844 456666664 444 23788888888888754
No 141
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.05 E-value=2.1e-09 Score=92.45 Aligned_cols=124 Identities=21% Similarity=0.195 Sum_probs=93.6
Q ss_pred CCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhcHHHHH--HHhcc-CCcEEEEeCCC-CC------CCCCCCCc-C
Q 016885 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAA--VILLP-SNITLFTLDFS-GS------GLSDGDYV-S 113 (381)
Q Consensus 45 ~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~--~~l~~-~G~~vi~~D~~-G~------G~S~~~~~-~ 113 (381)
.+|....+.+|.|...+ .+.|+||++||.+++...+.... ..|++ .||.|+.+|-- ++ +.+.+... .
T Consensus 42 ~~g~~r~y~l~vP~g~~--~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~ 119 (312)
T COG3509 42 VNGLKRSYRLYVPPGLP--SGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPADRR 119 (312)
T ss_pred cCCCccceEEEcCCCCC--CCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCccccccCCCcccccCCccccc
Confidence 67888999999998643 44599999999999988766554 45555 59999999532 22 22221111 2
Q ss_pred CCcchhhHHHHHHHHHHhcCCC--CcEEEEEEchhHHHHHHhhccCCC-ccEEEeccCcc
Q 016885 114 LGWHEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFS 170 (381)
Q Consensus 114 ~~~~~~~d~~~~i~~l~~~~~~--~~i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~ 170 (381)
.+..++..+.+++..+..+.++ .+|.+.|.|-||.++..++..+|+ +.++..+++..
T Consensus 120 ~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 120 RGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred CCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 3445678899999999998887 599999999999999999999998 67777666554
No 142
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=98.96 E-value=3.5e-07 Score=78.56 Aligned_cols=233 Identities=12% Similarity=0.073 Sum_probs=139.3
Q ss_pred EEEcCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhc-HHHH-----HHHhccCCcEEEEeCCCCCCCCCC-CCcC
Q 016885 41 EIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD-ANEA-----AVILLPSNITLFTLDFSGSGLSDG-DYVS 113 (381)
Q Consensus 41 ~~~~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~-~~~~-----~~~l~~~G~~vi~~D~~G~G~S~~-~~~~ 113 (381)
.+.+.-| .+++.++--. ++++|++|-.|..|-+... |..+ +..+.++ |.|+-+|.||+-.-.. -+..
T Consensus 26 ~V~T~~G-~v~V~V~Gd~----~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~gAp~~p~~ 99 (326)
T KOG2931|consen 26 DVETAHG-VVHVTVYGDP----KGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPGQEDGAPSFPEG 99 (326)
T ss_pred eeccccc-cEEEEEecCC----CCCCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCccccCCccCCCC
Confidence 3444454 4666666321 2368899999999976655 5433 4556666 9999999999843322 2222
Q ss_pred CCcchhhHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhhccCCC-ccEEEeccCccCHHHHHHHHHHHhhh------h
Q 016885 114 LGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKI------R 186 (381)
Q Consensus 114 ~~~~~~~d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~~~~~~~~~~~~~~~------~ 186 (381)
+.+-..+++.+.+-.+.+..+.+.|+-+|--.|+++-.++|..+|+ |.|+|++++......+..+....+.. .
T Consensus 100 y~yPsmd~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~gwiew~~~K~~s~~l~~~G 179 (326)
T KOG2931|consen 100 YPYPSMDDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKGWIEWAYNKVSSNLLYYYG 179 (326)
T ss_pred CCCCCHHHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCchHHHHHHHHHHHHHHHhhc
Confidence 2233467777777777777789999999999999999999999998 99999998876544443332222110 0
Q ss_pred CCcccH----------------HHHHHHHHHHhhhhhhc-c--------ccccchhhc----CCCCCCcEEEEeeCCCCc
Q 016885 187 LPKFTV----------------KMAVQYMRRVIQKKAKF-D--------IMDLNCLKL----APKTFIPALFGHASEDKF 237 (381)
Q Consensus 187 ~~~~~~----------------~~~~~~~~~~~~~~~~~-~--------~~~~~~~~~----~~~i~~Pvlii~G~~D~~ 237 (381)
+..... ....+..+..+....+. + ..+.+..-. ...++||+|++.|..-+.
T Consensus 180 mt~~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~~r~~~~~tlkc~vllvvGd~Sp~ 259 (326)
T KOG2931|consen 180 MTQGVKDYLLAHHFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDLSIERPKLGTTLKCPVLLVVGDNSPH 259 (326)
T ss_pred hhhhHHHHHHHHHhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCccccCCCcCccccccEEEEecCCCch
Confidence 000000 00111111111111100 0 000011111 125679999999999888
Q ss_pred cChHHHHHHHHHcC-CCceEEEeCC-CCC-CC-ChhhHHHHHHHHHHh
Q 016885 238 IRARHSDLIFNAYA-GDKNIIKFDG-DHN-SS-RPQFYYDSVSIFFYN 281 (381)
Q Consensus 238 v~~~~~~~l~~~~~-~~~~~~~~~g-gH~-~~-~~~~~~~~i~~fl~~ 281 (381)
+ +.+..+..++. ....++.... |-. .. .|..+.+.+.=|+..
T Consensus 260 ~--~~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~~FlqG 305 (326)
T KOG2931|consen 260 V--SAVVECNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFKYFLQG 305 (326)
T ss_pred h--hhhhhhhcccCcccceEEEEcccCCcccccCchHHHHHHHHHHcc
Confidence 7 45666777773 3445555554 444 33 788888888777743
No 143
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=98.96 E-value=1.8e-08 Score=82.49 Aligned_cols=176 Identities=18% Similarity=0.236 Sum_probs=110.9
Q ss_pred CcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCCC--C-----CC-----cCCCcch-------hhHHHHHH
Q 016885 66 LPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSD--G-----DY-----VSLGWHE-------KDDLKVVV 126 (381)
Q Consensus 66 ~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~--~-----~~-----~~~~~~~-------~~d~~~~i 126 (381)
..+||++||.|.+...|..+++.|.-.+..-++|..|-.-.+. + .+ ....+.+ .+.+..++
T Consensus 3 ~atIi~LHglGDsg~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~Li 82 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGSGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANLI 82 (206)
T ss_pred eEEEEEEecCCCCCccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHHH
Confidence 4589999999999999988888777777777877655321110 0 00 0001111 11222223
Q ss_pred HHHHhcC-CCCcEEEEEEchhHHHHHHhhccCCC-ccEEEeccCccCHHHHHHHHHHHhhhhCCcccHHHHHHHHHHHhh
Q 016885 127 SYLRGNK-QTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQ 204 (381)
Q Consensus 127 ~~l~~~~-~~~~i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (381)
++-.+.. ...+|++-|+||||.+++..+..++. +.+++..+++...... .++...
T Consensus 83 ~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~~~----------~~~~~~------------- 139 (206)
T KOG2112|consen 83 DNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRASI----------GLPGWL------------- 139 (206)
T ss_pred HHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccccchh----------hccCCc-------------
Confidence 2222221 23789999999999999999999876 7777766665431110 011100
Q ss_pred hhhhccccccchhhcCCCCCCcEEEEeeCCCCccChHHHHHHHHHc---CCCceEEEeCC-CCCCCChhhHHHHHHHHHH
Q 016885 205 KKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAY---AGDKNIIKFDG-DHNSSRPQFYYDSVSIFFY 280 (381)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~---~~~~~~~~~~g-gH~~~~~~~~~~~i~~fl~ 280 (381)
...+ ..|++..||+.|++||........+.+ ...+++..++| +|... .+-.+.+..|+.
T Consensus 140 -------------~~~~--~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g~~h~~~--~~e~~~~~~~~~ 202 (206)
T KOG2112|consen 140 -------------PGVN--YTPILLCHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPYPGLGHSTS--PQELDDLKSWIK 202 (206)
T ss_pred -------------cccC--cchhheecccCCceeehHHHHHHHHHHHHcCCceeeeecCCcccccc--HHHHHHHHHHHH
Confidence 0111 689999999999999987655555544 34477888888 89865 233567778887
Q ss_pred h
Q 016885 281 N 281 (381)
Q Consensus 281 ~ 281 (381)
+
T Consensus 203 ~ 203 (206)
T KOG2112|consen 203 T 203 (206)
T ss_pred H
Confidence 6
No 144
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.95 E-value=5e-08 Score=77.62 Aligned_cols=169 Identities=14% Similarity=0.091 Sum_probs=98.3
Q ss_pred CcEEEEeCCCCCChhc-HHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchhhHHHHHHHHHHhcCCCCcEEEEEEc
Q 016885 66 LPCVVYCHGNSGCRAD-ANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRS 144 (381)
Q Consensus 66 ~p~vv~~HG~~~~~~~-~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~i~l~G~S 144 (381)
.+.+|++||++++... |....+ .+. -.+-.+++.. + ..-..+|..+.++.-.... .++++|++||
T Consensus 2 ~~~~lIVpG~~~Sg~~HWq~~we--~~l-~~a~rveq~~-------w---~~P~~~dWi~~l~~~v~a~-~~~~vlVAHS 67 (181)
T COG3545 2 MTDVLIVPGYGGSGPNHWQSRWE--SAL-PNARRVEQDD-------W---EAPVLDDWIARLEKEVNAA-EGPVVLVAHS 67 (181)
T ss_pred CceEEEecCCCCCChhHHHHHHH--hhC-ccchhcccCC-------C---CCCCHHHHHHHHHHHHhcc-CCCeEEEEec
Confidence 3578999999987643 332222 111 1122333320 0 0011344444443333322 3569999999
Q ss_pred hhHHHHHHhhccCCC-ccEEEeccCccCHHHHHHHHHHHhhhhCCcccHHHHHHHHHHHhhhhhhccccccchhhcCCCC
Q 016885 145 MGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKT 223 (381)
Q Consensus 145 ~GG~~a~~~a~~~p~-v~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 223 (381)
+|+.++++++..... |+|+++++|+.--..... + .. ...| .. ....+.
T Consensus 68 LGc~~v~h~~~~~~~~V~GalLVAppd~~~~~~~----------~----~~-----------~~tf-----~~-~p~~~l 116 (181)
T COG3545 68 LGCATVAHWAEHIQRQVAGALLVAPPDVSRPEIR----------P----KH-----------LMTF-----DP-IPREPL 116 (181)
T ss_pred ccHHHHHHHHHhhhhccceEEEecCCCccccccc----------h----hh-----------cccc-----CC-CccccC
Confidence 999999999987655 999999998752211000 0 00 0001 11 112233
Q ss_pred CCcEEEEeeCCCCccChHHHHHHHHHcCCCceEEEeCCCCCCC-----ChhhHHHHHHHHHH
Q 016885 224 FIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDGDHNSS-----RPQFYYDSVSIFFY 280 (381)
Q Consensus 224 ~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~ggH~~~-----~~~~~~~~i~~fl~ 280 (381)
.-|.+++++.+|++++++.++.+++.++.. .+.+-++||... ...+....+.+|+.
T Consensus 117 pfps~vvaSrnDp~~~~~~a~~~a~~wgs~-lv~~g~~GHiN~~sG~g~wpeg~~~l~~~~s 177 (181)
T COG3545 117 PFPSVVVASRNDPYVSYEHAEDLANAWGSA-LVDVGEGGHINAESGFGPWPEGYALLAQLLS 177 (181)
T ss_pred CCceeEEEecCCCCCCHHHHHHHHHhccHh-heecccccccchhhcCCCcHHHHHHHHHHhh
Confidence 469999999999999999999999999774 344445699843 22344445555543
No 145
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=98.88 E-value=7.9e-08 Score=104.31 Aligned_cols=206 Identities=11% Similarity=0.033 Sum_probs=115.6
Q ss_pred CCcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchhhHHHH-HHHHHHhcCCCCcEEEEEE
Q 016885 65 PLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKV-VVSYLRGNKQTSRIGLWGR 143 (381)
Q Consensus 65 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~-~i~~l~~~~~~~~i~l~G~ 143 (381)
..+.++++||++++...|..++..|.. ++.|++++.+|+|...... .. .+++.+ .++.+.......++.++||
T Consensus 1067 ~~~~l~~lh~~~g~~~~~~~l~~~l~~-~~~v~~~~~~g~~~~~~~~--~~---l~~la~~~~~~i~~~~~~~p~~l~G~ 1140 (1296)
T PRK10252 1067 DGPTLFCFHPASGFAWQFSVLSRYLDP-QWSIYGIQSPRPDGPMQTA--TS---LDEVCEAHLATLLEQQPHGPYHLLGY 1140 (1296)
T ss_pred CCCCeEEecCCCCchHHHHHHHHhcCC-CCcEEEEECCCCCCCCCCC--CC---HHHHHHHHHHHHHhhCCCCCEEEEEe
Confidence 347899999999999999999998866 6999999999998653211 11 232222 2333433323468999999
Q ss_pred chhHHHHHHhhcc---CCC-ccEEEeccCccCHHH-------------HHHHHH---HH-hhhhCCcccHHHHHHHHHHH
Q 016885 144 SMGAVTSLLYGAE---DPS-IAGMVLDSAFSDLFD-------------LMLELV---DV-YKIRLPKFTVKMAVQYMRRV 202 (381)
Q Consensus 144 S~GG~~a~~~a~~---~p~-v~~vi~~~~~~~~~~-------------~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~ 202 (381)
||||.++..+|.+ .+. +..++++.+...... ...... .. ............ ...+...
T Consensus 1141 S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 1219 (1296)
T PRK10252 1141 SLGGTLAQGIAARLRARGEEVAFLGLLDTWPPETQNWREKEANGLDPEVLAEIDREREAFLAAQQGSLSTEL-FTTIEGN 1219 (1296)
T ss_pred chhhHHHHHHHHHHHHcCCceeEEEEecCCCcccccccccccccCChhhhhhhhhhHHHHHHhhhccccHHH-HHHHHHH
Confidence 9999999999885 344 788887765322100 000000 00 000000000000 0000000
Q ss_pred hhhhhhccccccchhhcCCCCCCcEEEEeeCCCCccChHHHHHHHHHcCCCceEEEeCCCCCCCChhhHHHHHHHHHHhh
Q 016885 203 IQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDGDHNSSRPQFYYDSVSIFFYNV 282 (381)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~ggH~~~~~~~~~~~i~~fl~~~ 282 (381)
...... .........+.+|++++.+..|..........+.+.. +...+..++|+|...........+.+++.+.
T Consensus 1220 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~-~~~~~~~v~g~H~~~~~~~~~~~~~~~l~~~ 1293 (1296)
T PRK10252 1220 YADAVR-----LLTTAHSVPFDGKATLFVAERTLQEGMSPEQAWSPWI-AELDVYRQDCAHVDIISPEAFEKIGPILRAT 1293 (1296)
T ss_pred HHHHHH-----HHHhccCCcccCceEEEEcCCCCcccCCcccchhhhc-CCCEEEECCCCHHHHCCcHHHHHHHHHHHHH
Confidence 000000 0000123456789999999988765544333333333 5567778899998664444456676777655
Q ss_pred c
Q 016885 283 L 283 (381)
Q Consensus 283 l 283 (381)
+
T Consensus 1294 l 1294 (1296)
T PRK10252 1294 L 1294 (1296)
T ss_pred h
Confidence 4
No 146
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.88 E-value=1.9e-08 Score=86.53 Aligned_cols=103 Identities=19% Similarity=0.204 Sum_probs=71.8
Q ss_pred CCcEEEEeCCCCCChhcHHHHHHHhc--------cCCcEEEEeCCCCCCCCC-CCCcCCCcchhhHHHHHHHHHHhcC--
Q 016885 65 PLPCVVYCHGNSGCRADANEAAVILL--------PSNITLFTLDFSGSGLSD-GDYVSLGWHEKDDLKVVVSYLRGNK-- 133 (381)
Q Consensus 65 ~~p~vv~~HG~~~~~~~~~~~~~~l~--------~~G~~vi~~D~~G~G~S~-~~~~~~~~~~~~d~~~~i~~l~~~~-- 133 (381)
.+..|||+||.+|+...+..++..+. ...+.++++|+......- +... ....+.+..+++.+.+..
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~~l---~~q~~~~~~~i~~i~~~~~~ 79 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHGRTL---QRQAEFLAEAIKYILELYKS 79 (225)
T ss_pred CCCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCccccccccccH---HHHHHHHHHHHHHHHHhhhh
Confidence 46799999999999888877776552 125889999987642111 1110 122455666777776655
Q ss_pred ---CCCcEEEEEEchhHHHHHHhhccCC---C-ccEEEeccCcc
Q 016885 134 ---QTSRIGLWGRSMGAVTSLLYGAEDP---S-IAGMVLDSAFS 170 (381)
Q Consensus 134 ---~~~~i~l~G~S~GG~~a~~~a~~~p---~-v~~vi~~~~~~ 170 (381)
+.++|+++||||||.++-.++.... + ++.+|.++.+.
T Consensus 80 ~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh 123 (225)
T PF07819_consen 80 NRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPH 123 (225)
T ss_pred ccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCC
Confidence 4489999999999999988776544 2 88988877654
No 147
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=98.85 E-value=4.1e-07 Score=82.83 Aligned_cols=155 Identities=13% Similarity=0.137 Sum_probs=111.4
Q ss_pred CCCcEEEEEEchhHHHHHHhhccCCCccEEEecc-CccCHHHHHHHHHHHhhhhCCcccHHHHHHHHHHHhhhhh-hccc
Q 016885 134 QTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDS-AFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKA-KFDI 211 (381)
Q Consensus 134 ~~~~i~l~G~S~GG~~a~~~a~~~p~v~~vi~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 211 (381)
.+++++|.|.|==|.+++..|+.+++|++++.+. ...++...+....+.++...+........+-+...+.... ..-.
T Consensus 170 ~i~~FvV~GaSKRGWTtWltaa~D~RV~aivP~Vid~LN~~~~l~h~y~~yG~~ws~a~~dY~~~gi~~~l~tp~f~~L~ 249 (367)
T PF10142_consen 170 NIEKFVVTGASKRGWTTWLTAAVDPRVKAIVPIVIDVLNMKANLEHQYRSYGGNWSFAFQDYYNEGITQQLDTPEFDKLM 249 (367)
T ss_pred CccEEEEeCCchHhHHHHHhhccCcceeEEeeEEEccCCcHHHHHHHHHHhCCCCccchhhhhHhCchhhcCCHHHHHHH
Confidence 3489999999999999999999899999988654 5567777777777776622222111111111111111111 1111
Q ss_pred cccchhhcCCCCCCcEEEEeeCCCCccChHHHHHHHHHcCCCceEEEeCC-CCCCCChhhHHHHHHHHHHhhcCCCCCC
Q 016885 212 MDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSSRPQFYYDSVSIFFYNVLHPPQIP 289 (381)
Q Consensus 212 ~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~g-gH~~~~~~~~~~~i~~fl~~~l~~~~~~ 289 (381)
.-.++.....++++|.++|.|..|++..+..+.-++..+++.+.+..+|. +|.... ....+.+..|+...+.....|
T Consensus 250 ~ivDP~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr~vPN~~H~~~~-~~~~~~l~~f~~~~~~~~~lP 327 (367)
T PF10142_consen 250 QIVDPYSYRDRLTMPKYIINATGDEFFVPDSSNFYYDKLPGEKYLRYVPNAGHSLIG-SDVVQSLRAFYNRIQNGRPLP 327 (367)
T ss_pred HhcCHHHHHHhcCccEEEEecCCCceeccCchHHHHhhCCCCeeEEeCCCCCcccch-HHHHHHHHHHHHHHHcCCCCC
Confidence 12355556677899999999999999999999999999999999999987 999776 788888999999887765554
No 148
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.79 E-value=1.3e-07 Score=79.41 Aligned_cols=201 Identities=21% Similarity=0.239 Sum_probs=120.8
Q ss_pred CcEEEEeCCCCCChhcHHHHHHHhccCC-----cEEEEeCCCCC----CCCCCCCcC------------CCcchhhHHHH
Q 016885 66 LPCVVYCHGNSGCRADANEAAVILLPSN-----ITLFTLDFSGS----GLSDGDYVS------------LGWHEKDDLKV 124 (381)
Q Consensus 66 ~p~vv~~HG~~~~~~~~~~~~~~l~~~G-----~~vi~~D~~G~----G~S~~~~~~------------~~~~~~~d~~~ 124 (381)
.=+.||+||++|+..++..++..|.+.+ --++.+|--|. |.-+..... .......-+..
T Consensus 45 ~iPTIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~ 124 (288)
T COG4814 45 AIPTIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKK 124 (288)
T ss_pred ccceEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHH
Confidence 3467899999999999999998888764 35777777763 211111000 01112456888
Q ss_pred HHHHHHhcCCCCcEEEEEEchhHHHHHHhhccC------CCccEEEeccCccCHHHHH-HHHHHHhhhhCCcccHHHHHH
Q 016885 125 VVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAED------PSIAGMVLDSAFSDLFDLM-LELVDVYKIRLPKFTVKMAVQ 197 (381)
Q Consensus 125 ~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~------p~v~~vi~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 197 (381)
++.+|.++++..++-++||||||.....++..+ |.+..+|.+++.++..... .+.....-..-|...-....+
T Consensus 125 ~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN~~~l~~de~v~~v~~~~~~~~~t~y~~ 204 (288)
T COG4814 125 AMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFNVGNLVPDETVTDVLKDGPGLIKTPYYD 204 (288)
T ss_pred HHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEecccccccccCCCcchheeeccCccccCcHHHH
Confidence 999999999999999999999999999998874 4488888887766511100 000000000011000000011
Q ss_pred HHHHHhhhhhhccccccchhhcCCCCCCcEEEEeeCCC------CccChHHHHHHHHHcCCC-ceEE--EeCC---CCCC
Q 016885 198 YMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASED------KFIRARHSDLIFNAYAGD-KNII--KFDG---DHNS 265 (381)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D------~~v~~~~~~~l~~~~~~~-~~~~--~~~g---gH~~ 265 (381)
++... . ... .-++-+|+|.|+-| -.||...+..++..+++. +.++ +++| .|..
T Consensus 205 y~~~n-------------~-k~v-~~~~evl~IaGDl~dg~~tDG~Vp~assls~~~lf~~~~ksy~e~~~~Gk~a~Hs~ 269 (288)
T COG4814 205 YIAKN-------------Y-KKV-SPNTEVLLIAGDLDDGKQTDGAVPWASSLSIYHLFKKNGKSYIESLYKGKDARHSK 269 (288)
T ss_pred HHHhc-------------c-eeC-CCCcEEEEEecccccCCcCCCceechHhHHHHHHhccCcceeEEEeeeCCcchhhc
Confidence 11000 0 111 12467899999855 467777777777777543 3332 3444 5764
Q ss_pred C-ChhhHHHHHHHHHHh
Q 016885 266 S-RPQFYYDSVSIFFYN 281 (381)
Q Consensus 266 ~-~~~~~~~~i~~fl~~ 281 (381)
. +...+...+..||-+
T Consensus 270 lhen~~v~~yv~~FLw~ 286 (288)
T COG4814 270 LHENPTVAKYVKNFLWE 286 (288)
T ss_pred cCCChhHHHHHHHHhhc
Confidence 3 556788888888853
No 149
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.77 E-value=1.4e-06 Score=78.57 Aligned_cols=201 Identities=14% Similarity=0.091 Sum_probs=125.1
Q ss_pred EEEEcCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChh---cHHHHHHHhccCCcEEEEeCCCCC--CCCC------
Q 016885 40 LEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRA---DANEAAVILLPSNITLFTLDFSGS--GLSD------ 108 (381)
Q Consensus 40 v~~~~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~---~~~~~~~~l~~~G~~vi~~D~~G~--G~S~------ 108 (381)
+.+. .++.+.- .+|.|.. .+....+||++||.+.+.. ....+.+.|.+.|+.++++.+|.- ....
T Consensus 65 ~~L~-~~~~~fl-aL~~~~~--~~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~ 140 (310)
T PF12048_consen 65 QWLQ-AGEERFL-ALWRPAN--SAKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEA 140 (310)
T ss_pred EEee-cCCEEEE-EEEeccc--CCCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCC
Confidence 3344 3444444 4788863 5567889999999998764 356777889999999999998871 1000
Q ss_pred ------C--CCcCC----------------Cc--chhhHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhhccCCC--c
Q 016885 109 ------G--DYVSL----------------GW--HEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS--I 160 (381)
Q Consensus 109 ------~--~~~~~----------------~~--~~~~d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~--v 160 (381)
+ ..... .. .....+.+++.++.++ +..+|+|+||+.|+..++.+....+. +
T Consensus 141 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~-~~~~ivlIg~G~gA~~~~~~la~~~~~~~ 219 (310)
T PF12048_consen 141 EEVPSAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQ-GGKNIVLIGHGTGAGWAARYLAEKPPPMP 219 (310)
T ss_pred CCCCCCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhc-CCceEEEEEeChhHHHHHHHHhcCCCccc
Confidence 0 00000 00 0134566777777665 44679999999999999999998876 8
Q ss_pred cEEEeccCccCHHHHHHHHHHHhhhhCCcccHHHHHHHHHHHhhhhhhccccccchhhcCCCCCCcEEEEeeCCCCccCh
Q 016885 161 AGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRA 240 (381)
Q Consensus 161 ~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~ 240 (381)
.++|++++.......-. ...+.+.++++|+|=|++.+...+-.
T Consensus 220 daLV~I~a~~p~~~~n~-------------------------------------~l~~~la~l~iPvLDi~~~~~~~~~~ 262 (310)
T PF12048_consen 220 DALVLINAYWPQPDRNP-------------------------------------ALAEQLAQLKIPVLDIYSADNPASQQ 262 (310)
T ss_pred CeEEEEeCCCCcchhhh-------------------------------------hHHHHhhccCCCEEEEecCCChHHHH
Confidence 99999998765332111 11144566789999988877333221
Q ss_pred HH-H-HHHHHHcC-CCceEEEeCC-CCCCCChh-hHHHHHHHHHHhh
Q 016885 241 RH-S-DLIFNAYA-GDKNIIKFDG-DHNSSRPQ-FYYDSVSIFFYNV 282 (381)
Q Consensus 241 ~~-~-~~l~~~~~-~~~~~~~~~g-gH~~~~~~-~~~~~i~~fl~~~ 282 (381)
.. . +...++.. ...+-+.+.+ .|.....+ .+.+.|..||+++
T Consensus 263 ~a~~R~~~a~r~~~~~YrQ~~L~~~~~~~~~~~~~l~~rIrGWL~~~ 309 (310)
T PF12048_consen 263 TAKQRKQAAKRNKKPDYRQIQLPGLPDNPSGWQEQLLRRIRGWLKRH 309 (310)
T ss_pred HHHHHHHHHHhccCCCceeEecCCCCCChhhHHHHHHHHHHHHHHhh
Confidence 11 1 11222222 1223334444 55544333 4889999999764
No 150
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.76 E-value=5.1e-07 Score=79.93 Aligned_cols=119 Identities=16% Similarity=0.215 Sum_probs=93.4
Q ss_pred CCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhcHHHHHHHhccC---------CcEEEEeCCCCCCCCCCCCcCCC
Q 016885 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPS---------NITLFTLDFSGSGLSDGDYVSLG 115 (381)
Q Consensus 45 ~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~---------G~~vi~~D~~G~G~S~~~~~~~~ 115 (381)
..|.+++..+..|...+.....-.++++||+.|+...+..++..|.+. -|.|+++.+||+|-|++.... +
T Consensus 131 IeGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~-G 209 (469)
T KOG2565|consen 131 IEGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKT-G 209 (469)
T ss_pred hcceeEEEEEecCCccccCCcccceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCccC-C
Confidence 478899988887765444555678899999999999988888777654 378999999999999865332 3
Q ss_pred cchhhHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhhccCCC-ccEEEe
Q 016885 116 WHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVL 165 (381)
Q Consensus 116 ~~~~~d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~-v~~vi~ 165 (381)
+. ....+.++.-|.-+.+.++..|-|--+|..++..+|..+|+ |.|+=+
T Consensus 210 Fn-~~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPenV~GlHl 259 (469)
T KOG2565|consen 210 FN-AAATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPENVLGLHL 259 (469)
T ss_pred cc-HHHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcchhhhHhhh
Confidence 33 34556666666666688999999999999999999999998 766554
No 151
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=98.75 E-value=9.9e-08 Score=85.90 Aligned_cols=233 Identities=21% Similarity=0.167 Sum_probs=125.0
Q ss_pred eEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcC----CC-----c--
Q 016885 48 HVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVS----LG-----W-- 116 (381)
Q Consensus 48 ~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~----~~-----~-- 116 (381)
..+.+.++.|.......+.|.+++.||+++........+..++..++.++..+...+|.+...... .. +
T Consensus 31 ~~~~~~l~~p~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 110 (299)
T COG1073 31 IALAAVLHLPPSGNEEKKLPAVVFLHGFGSSKEQSLGYAVLLAEKGYRVLAGDASLFGESGGDPRGLADSEGYAEDFSAA 110 (299)
T ss_pred ceeeeEEEecCCCCccccCceEEeccCccccccCcchHHHHhhhceeEEeeeccccccccccccccccCccccccccchh
Confidence 667888888864322267899999999999888766678888888898888876333322211100 00 0
Q ss_pred chhhHHHHHH--HHHHhcCCCCcEEEEEEchhHHHHHHhhccCC---CccEEEeccCccC----HH------HHHHHHHH
Q 016885 117 HEKDDLKVVV--SYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDP---SIAGMVLDSAFSD----LF------DLMLELVD 181 (381)
Q Consensus 117 ~~~~d~~~~i--~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~p---~v~~vi~~~~~~~----~~------~~~~~~~~ 181 (381)
........++ ++.......++....|+++|+..+..++...+ ....++....... +. ........
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~g~~~~~~~~~~~~~~~~~~~~ 190 (299)
T COG1073 111 VLLLLSEGVLDKDYRLLGASLGPRILAGLSLGGPSAGALLAWGPTRLDASRIVVWGESLGGALALLLLGANPELARELID 190 (299)
T ss_pred heeeeccccccHHHHHHhhhcCcceEEEEEeeccchHHHhhcchhHHHhhcccceeeccCceeeccccccchHHHHhhhh
Confidence 0000000000 00111001267788888888888877777665 1222222211111 00 01111111
Q ss_pred HhhhhCCcccH-HHHHHHHHHHhhhhhhccccccchhhcCCCCC-CcEEEEeeCCCCccChHHHHHHHHHcCC-CceEEE
Q 016885 182 VYKIRLPKFTV-KMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTF-IPALFGHASEDKFIRARHSDLIFNAYAG-DKNIIK 258 (381)
Q Consensus 182 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~Pvlii~G~~D~~v~~~~~~~l~~~~~~-~~~~~~ 258 (381)
........... .....+.... .. .......+....+.++. +|+|+++|.+|.++|...+..+++.... .+....
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~d~~~~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~ 267 (299)
T COG1073 191 YLITPGGFAPLPAPEAPLDTLP--LR-AVLLLLLDPFDDAEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLF 267 (299)
T ss_pred hhccCCCCCCCCcccccccccc--cc-hhhhccCcchhhHhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEE
Confidence 11100000000 0000000000 00 00112223334445555 7999999999999999999999998866 556666
Q ss_pred eCC-CCCCCC---h--hhHHHHHHHHHHhhc
Q 016885 259 FDG-DHNSSR---P--QFYYDSVSIFFYNVL 283 (381)
Q Consensus 259 ~~g-gH~~~~---~--~~~~~~i~~fl~~~l 283 (381)
+++ +|.... + .+..+.+.+||.+.+
T Consensus 268 ~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~l 298 (299)
T COG1073 268 VPGGGHIDLYDNPPAVEQALDKLAEFLERHL 298 (299)
T ss_pred ecCCccccccCccHHHHHHHHHHHHHHHHhc
Confidence 654 888652 2 278888999998765
No 152
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.69 E-value=5.3e-06 Score=69.67 Aligned_cols=105 Identities=20% Similarity=0.228 Sum_probs=73.4
Q ss_pred CCCCCcEEEEeCCCCCChhcHHHHHHHhccC---CcEEEEeCCCCCCCCC---CCCcCC----CcchhhHHHHHHHHHHh
Q 016885 62 EDTPLPCVVYCHGNSGCRADANEAAVILLPS---NITLFTLDFSGSGLSD---GDYVSL----GWHEKDDLKVVVSYLRG 131 (381)
Q Consensus 62 ~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~---G~~vi~~D~~G~G~S~---~~~~~~----~~~~~~d~~~~i~~l~~ 131 (381)
....++.++++.|..|....|..+++.|... -+.+.++-..||-.-+ ...... .+.-.+.+..-++++++
T Consensus 25 ~~~~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~ 104 (301)
T KOG3975|consen 25 SGEDKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKE 104 (301)
T ss_pred CCCCceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHH
Confidence 3577899999999999999998888776553 2558888888885443 111111 11113556677778877
Q ss_pred cCCC-CcEEEEEEchhHHHHHHhhccCC-C--ccEEEec
Q 016885 132 NKQT-SRIGLWGRSMGAVTSLLYGAEDP-S--IAGMVLD 166 (381)
Q Consensus 132 ~~~~-~~i~l~G~S~GG~~a~~~a~~~p-~--v~~vi~~ 166 (381)
..+. .+++++|||.|+++.+.+..... . |..++++
T Consensus 105 ~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~L 143 (301)
T KOG3975|consen 105 YVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLL 143 (301)
T ss_pred hCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEe
Confidence 6544 89999999999999999887432 2 5555553
No 153
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.61 E-value=1.1e-07 Score=92.36 Aligned_cols=119 Identities=17% Similarity=0.256 Sum_probs=78.1
Q ss_pred EEEEEEeecCCCCCCCCCcEEEEeCCCC---CChhcHHHHHHHhccC--CcEEEEeCCC-CC---CCCCCCCcCCCcchh
Q 016885 49 VLQCSHYMPSPFPEDTPLPCVVYCHGNS---GCRADANEAAVILLPS--NITLFTLDFS-GS---GLSDGDYVSLGWHEK 119 (381)
Q Consensus 49 ~l~~~~~~P~~~~~~~~~p~vv~~HG~~---~~~~~~~~~~~~l~~~--G~~vi~~D~~-G~---G~S~~~~~~~~~~~~ 119 (381)
-|...+|.|.......+.|+||++||++ ++...+ ....|+.. |+.|+++++| |. ...... ...+-.-.
T Consensus 78 cl~l~i~~p~~~~~~~~~pv~v~ihGG~~~~g~~~~~--~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~-~~~~n~g~ 154 (493)
T cd00312 78 CLYLNVYTPKNTKPGNSLPVMVWIHGGGFMFGSGSLY--PGDGLAREGDNVIVVSINYRLGVLGFLSTGDI-ELPGNYGL 154 (493)
T ss_pred CCeEEEEeCCCCCCCCCCCEEEEEcCCccccCCCCCC--ChHHHHhcCCCEEEEEecccccccccccCCCC-CCCcchhH
Confidence 3556688886432346789999999986 222221 12333333 4999999999 43 222111 11111125
Q ss_pred hHHHHHHHHHHhcC-----CCCcEEEEEEchhHHHHHHhhccCC--C-ccEEEeccCcc
Q 016885 120 DDLKVVVSYLRGNK-----QTSRIGLWGRSMGAVTSLLYGAEDP--S-IAGMVLDSAFS 170 (381)
Q Consensus 120 ~d~~~~i~~l~~~~-----~~~~i~l~G~S~GG~~a~~~a~~~p--~-v~~vi~~~~~~ 170 (381)
.|...+++|+++.. +.++|.|+|+|.||..+..++.... . ++++|+.++..
T Consensus 155 ~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~ 213 (493)
T cd00312 155 KDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSA 213 (493)
T ss_pred HHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCc
Confidence 89999999998863 2389999999999999988777632 2 78888887654
No 154
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.60 E-value=1.2e-06 Score=79.45 Aligned_cols=106 Identities=20% Similarity=0.219 Sum_probs=72.3
Q ss_pred CCCcEEEEeCCCCCChhc----H---HHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchhhHHHHHHHHHHhcCCCC
Q 016885 64 TPLPCVVYCHGNSGCRAD----A---NEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTS 136 (381)
Q Consensus 64 ~~~p~vv~~HG~~~~~~~----~---~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~i~~l~~~~~~~ 136 (381)
...|+||++||+|-.... + ..+...| + ...++++||.-... ......-.....++.++.++|.+..+.+
T Consensus 120 k~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l-~-~~SILvLDYsLt~~--~~~~~~yPtQL~qlv~~Y~~Lv~~~G~~ 195 (374)
T PF10340_consen 120 KSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLL-P-EVSILVLDYSLTSS--DEHGHKYPTQLRQLVATYDYLVESEGNK 195 (374)
T ss_pred CCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHc-C-CCeEEEEecccccc--ccCCCcCchHHHHHHHHHHHHHhccCCC
Confidence 346999999999833222 2 2222333 3 45899999875430 0011111134678888999999666789
Q ss_pred cEEEEEEchhHHHHHHhhccC----C--CccEEEeccCccCHH
Q 016885 137 RIGLWGRSMGAVTSLLYGAED----P--SIAGMVLDSAFSDLF 173 (381)
Q Consensus 137 ~i~l~G~S~GG~~a~~~a~~~----p--~v~~vi~~~~~~~~~ 173 (381)
+|.|+|-|.||.+++.++... + -.+++|+++|+.++.
T Consensus 196 nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 196 NIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred eEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 999999999999998766532 1 179999999998775
No 155
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.57 E-value=2.5e-08 Score=84.54 Aligned_cols=89 Identities=17% Similarity=0.272 Sum_probs=57.2
Q ss_pred cEEEEeCCCCC-ChhcHHHHHHHhccCCcE---EEEeCCCCCCCCCCCC-cCCCcchhhHHHHHHHHHHhcCCCCcEEEE
Q 016885 67 PCVVYCHGNSG-CRADANEAAVILLPSNIT---LFTLDFSGSGLSDGDY-VSLGWHEKDDLKVVVSYLRGNKQTSRIGLW 141 (381)
Q Consensus 67 p~vv~~HG~~~-~~~~~~~~~~~l~~~G~~---vi~~D~~G~G~S~~~~-~~~~~~~~~d~~~~i~~l~~~~~~~~i~l~ 141 (381)
.+|||+||.++ ....|..++..|.++||. |+++++-......... .......+..+.+.|+.+++..+. +|-|+
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa-kVDIV 80 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA-KVDIV 80 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT---EEEE
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC-EEEEE
Confidence 47999999998 557789999999999999 7999995433211000 000112256788888888887787 99999
Q ss_pred EEchhHHHHHHhhcc
Q 016885 142 GRSMGAVTSLLYGAE 156 (381)
Q Consensus 142 G~S~GG~~a~~~a~~ 156 (381)
||||||.++-.+...
T Consensus 81 gHS~G~~iaR~yi~~ 95 (219)
T PF01674_consen 81 GHSMGGTIARYYIKG 95 (219)
T ss_dssp EETCHHHHHHHHHHH
T ss_pred EcCCcCHHHHHHHHH
Confidence 999999999887753
No 156
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.56 E-value=1.5e-07 Score=88.33 Aligned_cols=93 Identities=11% Similarity=-0.011 Sum_probs=73.6
Q ss_pred CChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchhhHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhhcc
Q 016885 77 GCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAE 156 (381)
Q Consensus 77 ~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~ 156 (381)
.....|..+++.|.+.||.+ ..|++|+|.+-+.... .....+++.+.++.+.+..+..++.|+||||||.++..++..
T Consensus 105 ~~~~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~~~-~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~ 182 (440)
T PLN02733 105 DEVYYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQSNR-LPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSL 182 (440)
T ss_pred chHHHHHHHHHHHHHcCCcc-CCCcccCCCCcccccc-HHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHH
Confidence 44567889999999999865 8999999987654211 112367888888888877777899999999999999999988
Q ss_pred CCC-----ccEEEeccCccC
Q 016885 157 DPS-----IAGMVLDSAFSD 171 (381)
Q Consensus 157 ~p~-----v~~vi~~~~~~~ 171 (381)
+++ |+.+|++++...
T Consensus 183 ~p~~~~k~I~~~I~la~P~~ 202 (440)
T PLN02733 183 HSDVFEKYVNSWIAIAAPFQ 202 (440)
T ss_pred CCHhHHhHhccEEEECCCCC
Confidence 774 788888877654
No 157
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.52 E-value=1.7e-06 Score=74.79 Aligned_cols=110 Identities=18% Similarity=0.202 Sum_probs=73.8
Q ss_pred CCCCcEEEEeCCCCCChhcH-HHHHHHhccCCc--EEEEeCCCCCCCCCCCCcCC--CcchhhHHHHHHHHHHhcCCCCc
Q 016885 63 DTPLPCVVYCHGNSGCRADA-NEAAVILLPSNI--TLFTLDFSGSGLSDGDYVSL--GWHEKDDLKVVVSYLRGNKQTSR 137 (381)
Q Consensus 63 ~~~~p~vv~~HG~~~~~~~~-~~~~~~l~~~G~--~vi~~D~~G~G~S~~~~~~~--~~~~~~d~~~~i~~l~~~~~~~~ 137 (381)
...+.++||+||+..+.+.. ...++.....|+ .++.+.+|+.|.-.+-.... .......+...+..+.+..+..+
T Consensus 15 ~~~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~~ 94 (233)
T PF05990_consen 15 SPDKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGIKR 94 (233)
T ss_pred CCCCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCce
Confidence 35678999999999876553 233332222233 79999999887532211111 11125667778888877767799
Q ss_pred EEEEEEchhHHHHHHhhcc----C--C----CccEEEeccCccCH
Q 016885 138 IGLWGRSMGAVTSLLYGAE----D--P----SIAGMVLDSAFSDL 172 (381)
Q Consensus 138 i~l~G~S~GG~~a~~~a~~----~--p----~v~~vi~~~~~~~~ 172 (381)
|.|++||||+.+.+.+... . | .+..+++.+|-.+.
T Consensus 95 I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~ 139 (233)
T PF05990_consen 95 IHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDN 139 (233)
T ss_pred EEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCH
Confidence 9999999999999876543 1 1 26788888887665
No 158
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=98.51 E-value=1.7e-07 Score=86.64 Aligned_cols=116 Identities=23% Similarity=0.356 Sum_probs=80.5
Q ss_pred EEEEEeecCCCCCCCCCcEEEEeCCCC---CChhcHHHHHHHhccCC-cEEEEeCCCCC--CCC--------CCCCcCCC
Q 016885 50 LQCSHYMPSPFPEDTPLPCVVYCHGNS---GCRADANEAAVILLPSN-ITLFTLDFSGS--GLS--------DGDYVSLG 115 (381)
Q Consensus 50 l~~~~~~P~~~~~~~~~p~vv~~HG~~---~~~~~~~~~~~~l~~~G-~~vi~~D~~G~--G~S--------~~~~~~~~ 115 (381)
|...+|.|+ ....+.|++|++||++ |+......-...|+++| +.|++++||=- |.- +....+.+
T Consensus 80 L~LNIwaP~--~~a~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~G 157 (491)
T COG2272 80 LYLNIWAPE--VPAEKLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLG 157 (491)
T ss_pred eeEEeeccC--CCCCCCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCcccccceeeehhhcccccccccccc
Confidence 455588887 2346689999999997 33333333356788888 99999999821 211 11111112
Q ss_pred cchhhHHHHHHHHHHhcC-----CCCcEEEEEEchhHHHHHHhhccCCC----ccEEEeccCccC
Q 016885 116 WHEKDDLKVVVSYLRGNK-----QTSRIGLWGRSMGAVTSLLYGAEDPS----IAGMVLDSAFSD 171 (381)
Q Consensus 116 ~~~~~d~~~~i~~l~~~~-----~~~~i~l~G~S~GG~~a~~~a~~~p~----v~~vi~~~~~~~ 171 (381)
..|...+++|++++. +.++|.|+|.|.||+.++.+++. |. ++++|+.|+...
T Consensus 158 ---l~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 158 ---LLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAV-PSAKGLFHRAIALSGAAS 218 (491)
T ss_pred ---HHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhCCCCC
Confidence 589999999999874 22899999999999988877664 43 677777777664
No 159
>COG3150 Predicted esterase [General function prediction only]
Probab=98.49 E-value=3.5e-06 Score=66.32 Aligned_cols=182 Identities=12% Similarity=0.074 Sum_probs=97.4
Q ss_pred EEEeCCCCCChhcHHHH--HHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchhhHHHHHHHHHHhcCCCCcEEEEEEchh
Q 016885 69 VVYCHGNSGCRADANEA--AVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMG 146 (381)
Q Consensus 69 vv~~HG~~~~~~~~~~~--~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~i~l~G~S~G 146 (381)
||++||+.++..+.... .+.+.+. .|-.+.+..... .....+.+-++.+....+...++|+|-|+|
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~~--------~~~i~y~~p~l~----h~p~~a~~ele~~i~~~~~~~p~ivGssLG 69 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDED--------VRDIEYSTPHLP----HDPQQALKELEKAVQELGDESPLIVGSSLG 69 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhcc--------ccceeeecCCCC----CCHHHHHHHHHHHHHHcCCCCceEEeecch
Confidence 89999999987766432 2334332 222222221111 222444444555545445566999999999
Q ss_pred HHHHHHhhccCCCccEEEeccCccCHHHHHHHHHHHhhhhCCcccHHHHHHHHHHHhhhhhhccccccchhhcCCCCCCc
Q 016885 147 AVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIP 226 (381)
Q Consensus 147 G~~a~~~a~~~p~v~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P 226 (381)
|+.|.+++.+.. +++++ ++|...+.+.+.............-.......-+ .. .....++.++.|
T Consensus 70 GY~At~l~~~~G-irav~-~NPav~P~e~l~gylg~~en~ytg~~y~le~~hI------------~~-l~~~~~~~l~~p 134 (191)
T COG3150 70 GYYATWLGFLCG-IRAVV-FNPAVRPYELLTGYLGRPENPYTGQEYVLESRHI------------AT-LCVLQFRELNRP 134 (191)
T ss_pred HHHHHHHHHHhC-Chhhh-cCCCcCchhhhhhhcCCCCCCCCcceEEeehhhH------------HH-HHHhhccccCCC
Confidence 999999987765 55555 4676666655544333221111100000000000 00 011122333333
Q ss_pred -EEEEeeCC-CCccChHHHHHHHHHcCCCceEEEeCCCCCCCChhhHHHHHHHHHH
Q 016885 227 -ALFGHASE-DKFIRARHSDLIFNAYAGDKNIIKFDGDHNSSRPQFYYDSVSIFFY 280 (381)
Q Consensus 227 -vlii~G~~-D~~v~~~~~~~l~~~~~~~~~~~~~~ggH~~~~~~~~~~~i~~fl~ 280 (381)
.+++.... |++.+...+...+ ....+.++-+|+|.+..-+.+.+.|..|..
T Consensus 135 ~~~~lL~qtgDEvLDyr~a~a~y---~~~~~~V~dgg~H~F~~f~~~l~~i~aF~g 187 (191)
T COG3150 135 RCLVLLSQTGDEVLDYRQAVAYY---HPCYEIVWDGGDHKFKGFSRHLQRIKAFKG 187 (191)
T ss_pred cEEEeecccccHHHHHHHHHHHh---hhhhheeecCCCccccchHHhHHHHHHHhc
Confidence 34555555 9888766554444 333344444458999888889999999873
No 160
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.48 E-value=8.3e-07 Score=83.15 Aligned_cols=161 Identities=17% Similarity=0.155 Sum_probs=100.0
Q ss_pred CCCcEEEEeCCCC--CChhcHH-HHHHHhcc--CCcEEEEeCCCCC-CCCCCCCcCCCcchhhHHHHHHH----HHHhcC
Q 016885 64 TPLPCVVYCHGNS--GCRADAN-EAAVILLP--SNITLFTLDFSGS-GLSDGDYVSLGWHEKDDLKVVVS----YLRGNK 133 (381)
Q Consensus 64 ~~~p~vv~~HG~~--~~~~~~~-~~~~~l~~--~G~~vi~~D~~G~-G~S~~~~~~~~~~~~~d~~~~i~----~l~~~~ 133 (381)
...|+++++||.+ ....++. .+-..|.- +-..|.++|++.- |. ... .+.++.+..+.+ .+...+
T Consensus 174 ~~spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~igG---~nI---~h~ae~~vSf~r~kvlei~gef 247 (784)
T KOG3253|consen 174 PASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPIGG---ANI---KHAAEYSVSFDRYKVLEITGEF 247 (784)
T ss_pred cCCceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCCCC---cch---HHHHHHHHHHhhhhhhhhhccC
Confidence 3468999999988 1222222 22222222 2245667776632 21 100 011222333333 222233
Q ss_pred CCCcEEEEEEchhHHHHHHhhccCCC--ccEEEeccCccCHHHHHHHHHHHhhhhCCcccHHHHHHHHHHHhhhhhhccc
Q 016885 134 QTSRIGLWGRSMGAVTSLLYGAEDPS--IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDI 211 (381)
Q Consensus 134 ~~~~i~l~G~S~GG~~a~~~a~~~p~--v~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (381)
...+|+|+|+|||+.++.++...+.+ |.++|+++-..+..+- +. .
T Consensus 248 pha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdg------------pr--------------------g- 294 (784)
T KOG3253|consen 248 PHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDG------------PR--------------------G- 294 (784)
T ss_pred CCCceEEEecccCceeeEEeccccCCceEEEEEEecccccCCCc------------cc--------------------C-
Confidence 45899999999999888888877765 8899887654332110 00 0
Q ss_pred cccchhhcCCCCCCcEEEEeeCCCCccChHHHHHHHHHcCCCceEEEeCC-CCCCC
Q 016885 212 MDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS 266 (381)
Q Consensus 212 ~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~g-gH~~~ 266 (381)
..-+.+-.++.|+||+.|.+|..+++...+.+.+++....+++++++ +|..-
T Consensus 295 ---irDE~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA~~elhVI~~adhsma 347 (784)
T KOG3253|consen 295 ---IRDEALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQAEVELHVIGGADHSMA 347 (784)
T ss_pred ---CcchhhHhcCCceEEEecCCcccCCHHHHHHHHHHhhccceEEEecCCCcccc
Confidence 00033445679999999999999999999999999988888999987 88843
No 161
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=98.45 E-value=4e-07 Score=89.49 Aligned_cols=120 Identities=20% Similarity=0.313 Sum_probs=74.7
Q ss_pred EEEEEeecCCCCCCCCCcEEEEeCCCC---CChh-cHHHHHHHhccCCcEEEEeCCC----CCCCCCCCCcCCCcchhhH
Q 016885 50 LQCSHYMPSPFPEDTPLPCVVYCHGNS---GCRA-DANEAAVILLPSNITLFTLDFS----GSGLSDGDYVSLGWHEKDD 121 (381)
Q Consensus 50 l~~~~~~P~~~~~~~~~p~vv~~HG~~---~~~~-~~~~~~~~l~~~G~~vi~~D~~----G~G~S~~~~~~~~~~~~~d 121 (381)
|...+|.|.......+.|++|++||++ |+.. ........++.+++.|++++|| |+-.+.......+-.-..|
T Consensus 109 L~LnI~~P~~~~~~~~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~D 188 (535)
T PF00135_consen 109 LYLNIYTPSNASSNSKLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGLLD 188 (535)
T ss_dssp -EEEEEEETSSSSTTSEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHHHHH
T ss_pred HHHhhhhccccccccccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccCchhhhhhh
Confidence 666699998654444789999999988 3331 1223334556779999999999 3322211111101122689
Q ss_pred HHHHHHHHHhcCCC-----CcEEEEEEchhHHHHHHhhccCC--C-ccEEEeccCc
Q 016885 122 LKVVVSYLRGNKQT-----SRIGLWGRSMGAVTSLLYGAEDP--S-IAGMVLDSAF 169 (381)
Q Consensus 122 ~~~~i~~l~~~~~~-----~~i~l~G~S~GG~~a~~~a~~~p--~-v~~vi~~~~~ 169 (381)
...+++|+++.... ++|.|+|+|.||..+...+.... . ++++|+.++.
T Consensus 189 q~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs 244 (535)
T PF00135_consen 189 QRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGS 244 (535)
T ss_dssp HHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--
T ss_pred hHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeeccccccccccccccccc
Confidence 99999999987532 89999999999998876665422 2 8999998873
No 162
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.43 E-value=2.9e-05 Score=64.16 Aligned_cols=104 Identities=18% Similarity=0.161 Sum_probs=76.8
Q ss_pred CCCcEEEEeCCCCCChh---cHHHHHHHhccCCcEEEEeCCCCC----CCCCCCCcCCCcchhhHHHHHHHHHHhcCCCC
Q 016885 64 TPLPCVVYCHGNSGCRA---DANEAAVILLPSNITLFTLDFSGS----GLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTS 136 (381)
Q Consensus 64 ~~~p~vv~~HG~~~~~~---~~~~~~~~l~~~G~~vi~~D~~G~----G~S~~~~~~~~~~~~~d~~~~i~~l~~~~~~~ 136 (381)
...-.|||+.|++..-- ....++..|.+.+|..+-+-++.+ |.+.-+ .+++|+..+++++.......
T Consensus 34 v~~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~slk------~D~edl~~l~~Hi~~~~fSt 107 (299)
T KOG4840|consen 34 VESVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNGYGTFSLK------DDVEDLKCLLEHIQLCGFST 107 (299)
T ss_pred ceEEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeecccccccccccccc------ccHHHHHHHHHHhhccCccc
Confidence 34578999999985432 345778899999999998887643 333211 44789999999886654447
Q ss_pred cEEEEEEchhHHHHHHhhcc--CCC-ccEEEeccCccCHH
Q 016885 137 RIGLWGRSMGAVTSLLYGAE--DPS-IAGMVLDSAFSDLF 173 (381)
Q Consensus 137 ~i~l~G~S~GG~~a~~~a~~--~p~-v~~vi~~~~~~~~~ 173 (381)
.|+++|||-|+.-.+.+... .++ +.+.|+.+|..+..
T Consensus 108 ~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 108 DVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDRE 147 (299)
T ss_pred ceEEEecCccchHHHHHHHhccchHHHHHHHHhCccchhh
Confidence 99999999999999988843 233 88888888887644
No 163
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=98.41 E-value=2.5e-06 Score=74.26 Aligned_cols=125 Identities=15% Similarity=0.121 Sum_probs=77.5
Q ss_pred CeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChh-cHHHHHHHhccC----CcEEEEeCCCCCCCCCCCCcCCCcchhhH
Q 016885 47 GHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRA-DANEAAVILLPS----NITLFTLDFSGSGLSDGDYVSLGWHEKDD 121 (381)
Q Consensus 47 g~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~-~~~~~~~~l~~~----G~~vi~~D~~G~G~S~~~~~~~~~~~~~d 121 (381)
..+....+|+|.+.....+.|++++.||-..... ....+.+.|... .-.++.+|.--.-...............-
T Consensus 79 ~~~~~~vv~lppgy~~~~k~pvl~~~DG~~~~~~g~i~~~~dsli~~g~i~pai~vgid~~d~~~R~~~~~~n~~~~~~L 158 (299)
T COG2382 79 LSERRRVVYLPPGYNPLEKYPVLYLQDGQDWFRSGRIPRILDSLIAAGEIPPAILVGIDYIDVKKRREELHCNEAYWRFL 158 (299)
T ss_pred ccceeEEEEeCCCCCccccccEEEEeccHHHHhcCChHHHHHHHHHcCCCCCceEEecCCCCHHHHHHHhcccHHHHHHH
Confidence 3556666788887777788999999998652211 122334444433 35677777643110000110000000122
Q ss_pred HHHHHHHHHhcCCC----CcEEEEEEchhHHHHHHhhccCCC-ccEEEeccCccC
Q 016885 122 LKVVVSYLRGNKQT----SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSD 171 (381)
Q Consensus 122 ~~~~i~~l~~~~~~----~~i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~ 171 (381)
..+++=++++.+.. +.-+|+|.|+||.+++..+..+|+ +..|+..||.+.
T Consensus 159 ~~eLlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~ 213 (299)
T COG2382 159 AQELLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFW 213 (299)
T ss_pred HHHhhhhhhccCcccccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCccc
Confidence 34556677777654 556899999999999999999999 888888888653
No 164
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.39 E-value=1.1e-06 Score=76.24 Aligned_cols=100 Identities=20% Similarity=0.231 Sum_probs=77.6
Q ss_pred cEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchhhHHHHHHHHHHhcCCCCcEEEEEEchh
Q 016885 67 PCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMG 146 (381)
Q Consensus 67 p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~i~l~G~S~G 146 (381)
|+|.++||.+|....|..++..|... ..|+..+.||.|.-..... .. -+-+...++.+++..+..++.|+|||+|
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~-~~v~~l~a~g~~~~~~~~~--~l--~~~a~~yv~~Ir~~QP~GPy~L~G~S~G 75 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPL-LPVYGLQAPGYGAGEQPFA--SL--DDMAAAYVAAIRRVQPEGPYVLLGWSLG 75 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccC-ceeeccccCcccccccccC--CH--HHHHHHHHHHHHHhCCCCCEEEEeeccc
Confidence 57899999999999999999999887 8999999999975322221 11 1344555677777767799999999999
Q ss_pred HHHHHHhhccCC----CccEEEeccCccC
Q 016885 147 AVTSLLYGAEDP----SIAGMVLDSAFSD 171 (381)
Q Consensus 147 G~~a~~~a~~~p----~v~~vi~~~~~~~ 171 (381)
|.+|..+|.+.- .|..++++.+...
T Consensus 76 G~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 76 GAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred cHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 999998887632 3888888776655
No 165
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.38 E-value=1.1e-05 Score=68.57 Aligned_cols=92 Identities=15% Similarity=0.061 Sum_probs=61.3
Q ss_pred EeCCCC--CChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchhhH-HHHHHHHHHhcCCCCcEEEEEEchhH
Q 016885 71 YCHGNS--GCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDD-LKVVVSYLRGNKQTSRIGLWGRSMGA 147 (381)
Q Consensus 71 ~~HG~~--~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~d-~~~~i~~l~~~~~~~~i~l~G~S~GG 147 (381)
++|+.+ ++...|..++..|.. ++.|++++.+|++.+..... . .++ .....+.+.......++.++|||+||
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~~-~~~v~~~~~~g~~~~~~~~~--~---~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg 75 (212)
T smart00824 2 CFPSTAAPSGPHEYARLAAALRG-RRDVSALPLPGFGPGEPLPA--S---ADALVEAQAEAVLRAAGGRPFVLVGHSSGG 75 (212)
T ss_pred ccCCCCCCCcHHHHHHHHHhcCC-CccEEEecCCCCCCCCCCCC--C---HHHHHHHHHHHHHHhcCCCCeEEEEECHHH
Confidence 344433 566678888888876 58999999999986543321 1 122 22334444444445789999999999
Q ss_pred HHHHHhhccC---CC-ccEEEeccC
Q 016885 148 VTSLLYGAED---PS-IAGMVLDSA 168 (381)
Q Consensus 148 ~~a~~~a~~~---p~-v~~vi~~~~ 168 (381)
.++...+... +. +.+++++.+
T Consensus 76 ~~a~~~a~~l~~~~~~~~~l~~~~~ 100 (212)
T smart00824 76 LLAHAVAARLEARGIPPAAVVLLDT 100 (212)
T ss_pred HHHHHHHHHHHhCCCCCcEEEEEcc
Confidence 9998877752 22 777776654
No 166
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.38 E-value=2.2e-05 Score=68.66 Aligned_cols=203 Identities=17% Similarity=0.123 Sum_probs=109.9
Q ss_pred cEEEEeCCCCCC-hhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchhhHHHHHHHHHHhcCCC--CcEEEEEE
Q 016885 67 PCVVYCHGNSGC-RADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQT--SRIGLWGR 143 (381)
Q Consensus 67 p~vv~~HG~~~~-~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~i~~l~~~~~~--~~i~l~G~ 143 (381)
|+||+ =|+.+. .......++...+.|+.++.+-.+........ . ....-+..+++.+.+.... .+|.+=.+
T Consensus 1 plvvl-~gW~gA~~~hl~KY~~~Y~~~g~~il~~~~~~~~~~~~~---~--~~~~~~~~l~~~l~~~~~~~~~~il~H~F 74 (240)
T PF05705_consen 1 PLVVL-LGWMGAKPKHLAKYSDLYQDPGFDILLVTSPPADFFWPS---K--RLAPAADKLLELLSDSQSASPPPILFHSF 74 (240)
T ss_pred CEEEE-EeCCCCCHHHHHHHHHHHHhcCCeEEEEeCCHHHHeeec---c--chHHHHHHHHHHhhhhccCCCCCEEEEEE
Confidence 34444 455544 44455666666678999999877643211111 0 1123344455555554333 38999999
Q ss_pred chhHHHHHHhhcc-----------CCCccEEEeccCccCHHH--HHHHHHHHhhhhCCccc------H-HHHHHHHHHHh
Q 016885 144 SMGAVTSLLYGAE-----------DPSIAGMVLDSAFSDLFD--LMLELVDVYKIRLPKFT------V-KMAVQYMRRVI 203 (381)
Q Consensus 144 S~GG~~a~~~a~~-----------~p~v~~vi~~~~~~~~~~--~~~~~~~~~~~~~~~~~------~-~~~~~~~~~~~ 203 (381)
|.||...+..... .|+++|+|+.|++..... ....+.. .+|... . ......+....
T Consensus 75 SnGG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (240)
T PF05705_consen 75 SNGGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIPTYSSSARAFSA----ALPKSSPRWFVPLWPLLQFLLRLSI 150 (240)
T ss_pred ECchHHHHHHHHHHHHhcccccccccccceeEEeCCCCccccccHHHHHHH----HcCccchhhHHHHHHHHHHHHHHHH
Confidence 9988877654331 223899999887754322 1111111 122210 0 00011111100
Q ss_pred hhhhhcc-------ccccchhhcCCCCCCcEEEEeeCCCCccChHHHHHHHHHc---CCCceEEEeCC-CCC---CCChh
Q 016885 204 QKKAKFD-------IMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAY---AGDKNIIKFDG-DHN---SSRPQ 269 (381)
Q Consensus 204 ~~~~~~~-------~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~---~~~~~~~~~~g-gH~---~~~~~ 269 (381)
....... ..............+|-|++++..|.+++.+..+++.+.. +.......+++ .|. -..++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~ 230 (240)
T PF05705_consen 151 ISYFIFGYPDVQEYYRRALNDFANSPSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPD 230 (240)
T ss_pred HHHHHhcCCcHHHHHHHHHhhhhcCCCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHH
Confidence 0000000 0000000122334589999999999999999888887765 33456666665 665 44899
Q ss_pred hHHHHHHHHH
Q 016885 270 FYYDSVSIFF 279 (381)
Q Consensus 270 ~~~~~i~~fl 279 (381)
+|++.+.+|+
T Consensus 231 ~Y~~~v~~fw 240 (240)
T PF05705_consen 231 RYWRAVDEFW 240 (240)
T ss_pred HHHHHHHhhC
Confidence 9999998874
No 167
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.30 E-value=4.5e-07 Score=82.37 Aligned_cols=107 Identities=20% Similarity=0.211 Sum_probs=64.0
Q ss_pred CCCCcEEEEeCCCCCCh--hcH-HHHHHHh-cc--CCcEEEEeCCCCCCCCCCCCcCCCc---chhhHHHHHHHHHHhcC
Q 016885 63 DTPLPCVVYCHGNSGCR--ADA-NEAAVIL-LP--SNITLFTLDFSGSGLSDGDYVSLGW---HEKDDLKVVVSYLRGNK 133 (381)
Q Consensus 63 ~~~~p~vv~~HG~~~~~--~~~-~~~~~~l-~~--~G~~vi~~D~~G~G~S~~~~~~~~~---~~~~d~~~~i~~l~~~~ 133 (381)
+..+|++|++||+.++. ..| ..+.+.+ .. .+++|+++|+...-. ..+..... .....+...+..|.+..
T Consensus 68 n~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~--~~Y~~a~~n~~~vg~~la~~l~~L~~~~ 145 (331)
T PF00151_consen 68 NPSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGAS--NNYPQAVANTRLVGRQLAKFLSFLINNF 145 (331)
T ss_dssp -TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHS--S-HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhcc--ccccchhhhHHHHHHHHHHHHHHHHhhc
Confidence 46789999999999877 233 4555544 44 489999999964321 11100000 01234556666666433
Q ss_pred C--CCcEEEEEEchhHHHHHHhhccCCC---ccEEEeccCccC
Q 016885 134 Q--TSRIGLWGRSMGAVTSLLYGAEDPS---IAGMVLDSAFSD 171 (381)
Q Consensus 134 ~--~~~i~l~G~S~GG~~a~~~a~~~p~---v~~vi~~~~~~~ 171 (381)
+ .++|+|+|||+||.+|-.++..... +..+..+.|...
T Consensus 146 g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP 188 (331)
T PF00151_consen 146 GVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGP 188 (331)
T ss_dssp ---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-T
T ss_pred CCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccc
Confidence 3 4899999999999999988876544 888888777643
No 168
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=98.28 E-value=1.2e-05 Score=76.83 Aligned_cols=125 Identities=15% Similarity=0.211 Sum_probs=83.5
Q ss_pred CCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhcHHHHHH-----------H-------hccCCcEEEEeCCC-CCCC
Q 016885 46 RGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAV-----------I-------LLPSNITLFTLDFS-GSGL 106 (381)
Q Consensus 46 dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~-----------~-------l~~~G~~vi~~D~~-G~G~ 106 (381)
.+..+.++++.... .....|+||+++|+.|+...+..+.+ . +.+ -.+++.+|.| |+|.
T Consensus 59 ~~~~lFyw~~~s~~--~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~-~~~~l~iDqP~G~G~ 135 (462)
T PTZ00472 59 TDKHYFYWAFGPRN--GNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNN-EAYVIYVDQPAGVGF 135 (462)
T ss_pred CCceEEEEEEEcCC--CCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCccccc-ccCeEEEeCCCCcCc
Confidence 36778887776553 34568999999999998765422210 1 112 2578888965 8888
Q ss_pred CCCCCcCCC---cchhhHHHHHHHHHHhcCC---CCcEEEEEEchhHHHHHHhhccC---------CC--ccEEEeccCc
Q 016885 107 SDGDYVSLG---WHEKDDLKVVVSYLRGNKQ---TSRIGLWGRSMGAVTSLLYGAED---------PS--IAGMVLDSAF 169 (381)
Q Consensus 107 S~~~~~~~~---~~~~~d~~~~i~~l~~~~~---~~~i~l~G~S~GG~~a~~~a~~~---------p~--v~~vi~~~~~ 169 (381)
|........ ...++|+..+++.+.+..+ ..++.|+|+|+||..+..+|.+- .. ++++++.+|+
T Consensus 136 S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~ 215 (462)
T PTZ00472 136 SYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGL 215 (462)
T ss_pred ccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEeccc
Confidence 865432221 1236777777765554433 38999999999999887776541 12 7899998887
Q ss_pred cCHH
Q 016885 170 SDLF 173 (381)
Q Consensus 170 ~~~~ 173 (381)
.+..
T Consensus 216 ~dp~ 219 (462)
T PTZ00472 216 TDPY 219 (462)
T ss_pred cChh
Confidence 7654
No 169
>COG0627 Predicted esterase [General function prediction only]
Probab=98.28 E-value=6.1e-06 Score=74.12 Aligned_cols=214 Identities=14% Similarity=0.048 Sum_probs=113.5
Q ss_pred CCCCcEEEEeCCCCCChhcH---HHHHHHhccCCcEEEEeCCC--------------CCCCCC-----CCCc---CCCcc
Q 016885 63 DTPLPCVVYCHGNSGCRADA---NEAAVILLPSNITLFTLDFS--------------GSGLSD-----GDYV---SLGWH 117 (381)
Q Consensus 63 ~~~~p~vv~~HG~~~~~~~~---~~~~~~l~~~G~~vi~~D~~--------------G~G~S~-----~~~~---~~~~~ 117 (381)
+.+.|+++++||..++...+ ..+-+.....|+.++++|-. |.+.|- ..+. ...|+
T Consensus 51 ~~~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~ 130 (316)
T COG0627 51 GRDIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWE 130 (316)
T ss_pred CCCCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchh
Confidence 46789999999999875332 23334455668888887432 221110 0000 01111
Q ss_pred hhhHHHHHHHHHHhcCCC----CcEEEEEEchhHHHHHHhhccCCC-ccEEEeccCccCHHHHHHHHHHHhhhhCCcccH
Q 016885 118 EKDDLKVVVSYLRGNKQT----SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTV 192 (381)
Q Consensus 118 ~~~d~~~~i~~l~~~~~~----~~i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (381)
. --..++-..+.+.... ++..++||||||+-|+.+|+++|+ ++.+...+|..+......... ....+.-.
T Consensus 131 t-fl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s~~~~~~~---~~~~~~g~- 205 (316)
T COG0627 131 T-FLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPSSPWGPTL---AMGDPWGG- 205 (316)
T ss_pred H-HHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceeccccccccccccccccc---cccccccC-
Confidence 1 0011222122222221 278999999999999999999987 888888888876552211110 00000000
Q ss_pred HHHHHHHHHHhhhhhhccccccchhhcCC--------------CCCCcEEEEeeCCCCccC-h-HHHHHHHHHc---CCC
Q 016885 193 KMAVQYMRRVIQKKAKFDIMDLNCLKLAP--------------KTFIPALFGHASEDKFIR-A-RHSDLIFNAY---AGD 253 (381)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~i~~Pvlii~G~~D~~v~-~-~~~~~l~~~~---~~~ 253 (381)
.. ...++...........++...+. ....++++-+|..|.+.. . ...+.+.+++ +.+
T Consensus 206 ~~----~~~~~G~~~~~~w~~~D~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~g~ad~~~~~~~~~~~~~~~a~~~~g~~ 281 (316)
T COG0627 206 KA----FNAMLGPDSDPAWQENDPLSLIEKLVANANTRIWVYGGSPPELLIDNGPADFFLAANNLSTRAFAEALRAAGIP 281 (316)
T ss_pred cc----HHHhcCCCccccccccCchhHHHHhhhcccccceecccCCCccccccccchhhhhhcccCHHHHHHHHHhcCCC
Confidence 00 00001001010111111111110 034577788899998775 2 2355555555 345
Q ss_pred ceEEEeC-CCCCCCChhhHHHHHHHHHHhhcCC
Q 016885 254 KNIIKFD-GDHNSSRPQFYYDSVSIFFYNVLHP 285 (381)
Q Consensus 254 ~~~~~~~-ggH~~~~~~~~~~~i~~fl~~~l~~ 285 (381)
..+...+ |+|.........+....|+...+..
T Consensus 282 ~~~~~~~~G~Hsw~~w~~~l~~~~~~~a~~l~~ 314 (316)
T COG0627 282 NGVRDQPGGDHSWYFWASQLADHLPWLAGALGL 314 (316)
T ss_pred ceeeeCCCCCcCHHHHHHHHHHHHHHHHHHhcc
Confidence 5666664 5898777778888888888877653
No 170
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.24 E-value=1.1e-05 Score=68.34 Aligned_cols=217 Identities=13% Similarity=0.108 Sum_probs=113.8
Q ss_pred CCCcEEEEeCCCCCChhcHH-HHHHHhccCCcEEEEeCCCCCCCCCCCCcCCC-cchhhHH----HHHHHHHHhc-----
Q 016885 64 TPLPCVVYCHGNSGCRADAN-EAAVILLPSNITLFTLDFSGSGLSDGDYVSLG-WHEKDDL----KVVVSYLRGN----- 132 (381)
Q Consensus 64 ~~~p~vv~~HG~~~~~~~~~-~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~-~~~~~d~----~~~i~~l~~~----- 132 (381)
+..++-+.+-|-|.+...-. .+...+..+|...+.+.-|-+|.......-.. ...+.|+ .+.|+.....
T Consensus 111 K~~~KOG~~a~tgdh~y~rr~~L~~p~~k~~i~tmvle~pfYgqr~p~~q~~~~Le~vtDlf~mG~A~I~E~~~lf~Ws~ 190 (371)
T KOG1551|consen 111 KMADLCLSWALTGDHVYTRRLVLSKPINKREIATMVLEKPFYGQRVPEEQIIHMLEYVTDLFKMGRATIQEFVKLFTWSS 190 (371)
T ss_pred CcCCeeEEEeecCCceeEeeeeecCchhhhcchheeeecccccccCCHHHHHHHHHHHHHHHHhhHHHHHHHHHhccccc
Confidence 44566666666655433222 35567788899999999998887643211000 0112222 1223333322
Q ss_pred -CCCCcEEEEEEchhHHHHHHhhccCCC-ccEEEeccCccCHHHHHHHH-------HHH---------hhhhCCcccHHH
Q 016885 133 -KQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLEL-------VDV---------YKIRLPKFTVKM 194 (381)
Q Consensus 133 -~~~~~i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~~~~~~~~~-------~~~---------~~~~~~~~~~~~ 194 (381)
.+..+..++|.||||.+|..+...++. |.-+-+.++........... ... +..+.|.-....
T Consensus 191 ~~g~g~~~~~g~Smgg~~a~~vgS~~q~Pva~~p~l~~~~asvs~teg~l~~~~s~~~~~~~~t~~~~~~~r~p~Q~~~~ 270 (371)
T KOG1551|consen 191 ADGLGNLNLVGRSMGGDIANQVGSLHQKPVATAPCLNSSKASVSATEGLLLQDTSKMKRFNQTTNKSGYTSRNPAQSYHL 270 (371)
T ss_pred ccCcccceeeeeecccHHHHhhcccCCCCccccccccccccchhhhhhhhhhhhHHHHhhccCcchhhhhhhCchhhHHH
Confidence 245899999999999999999987776 43333323221111111100 000 011122111100
Q ss_pred HHHHHHHHhhhhhhccccc--cchhhcCCCCCCc-----EEEEeeCCCCccChHHHHHHHHHcCCCceEEEeCCCCCCC-
Q 016885 195 AVQYMRRVIQKKAKFDIMD--LNCLKLAPKTFIP-----ALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDGDHNSS- 266 (381)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~P-----vlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~ggH~~~- 266 (381)
....-.+ ..+......++ .+-...+....+| +.++.+.+|..+|......+.+.+++. ++...+|||...
T Consensus 271 ~~~~~sr-n~~~E~~~~Mr~vmd~~T~v~~fp~Pvdpsl~ivv~A~~D~Yipr~gv~~lQ~~WPg~-eVr~~egGHVsay 348 (371)
T KOG1551|consen 271 LSKEQSR-NSRKESLIFMRGVMDECTHVANFPVPVDPSLIIVVQAKEDAYIPRTGVRSLQEIWPGC-EVRYLEGGHVSAY 348 (371)
T ss_pred HHHHhhh-cchHHHHHHHHHHHHhhchhhcCCCCCCCCeEEEEEecCCccccccCcHHHHHhCCCC-EEEEeecCceeee
Confidence 0000000 00000000000 0101122222232 578889999999998888888888775 788888999854
Q ss_pred --ChhhHHHHHHHHHHhh
Q 016885 267 --RPQFYYDSVSIFFYNV 282 (381)
Q Consensus 267 --~~~~~~~~i~~fl~~~ 282 (381)
..+.+.+.|.+-|++.
T Consensus 349 l~k~dlfRR~I~d~L~R~ 366 (371)
T KOG1551|consen 349 LFKQDLFRRAIVDGLDRL 366 (371)
T ss_pred ehhchHHHHHHHHHHHhh
Confidence 5678888888888654
No 171
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.15 E-value=0.00024 Score=66.40 Aligned_cols=96 Identities=22% Similarity=0.310 Sum_probs=56.6
Q ss_pred CCCcEEEEe----CCC--CCChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchhhHHHH----HHHHHHhcC
Q 016885 64 TPLPCVVYC----HGN--SGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKV----VVSYLRGNK 133 (381)
Q Consensus 64 ~~~p~vv~~----HG~--~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~----~i~~l~~~~ 133 (381)
.+.|.||+- ||- ||-+. -..+...|.. |+.|+-+.+.-. ..+. +..+|+.. .++.+....
T Consensus 67 ~krP~vViDPRAGHGpGIGGFK~-dSevG~AL~~-GHPvYFV~F~p~----P~pg----QTl~DV~~ae~~Fv~~V~~~h 136 (581)
T PF11339_consen 67 TKRPFVVIDPRAGHGPGIGGFKP-DSEVGVALRA-GHPVYFVGFFPE----PEPG----QTLEDVMRAEAAFVEEVAERH 136 (581)
T ss_pred CCCCeEEeCCCCCCCCCccCCCc-ccHHHHHHHc-CCCeEEEEecCC----CCCC----CcHHHHHHHHHHHHHHHHHhC
Confidence 445666654 332 33333 1344445544 888887776521 1111 22455443 334444443
Q ss_pred CC-CcEEEEEEchhHHHHHHhhccCCC-ccEEEeccCc
Q 016885 134 QT-SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAF 169 (381)
Q Consensus 134 ~~-~~i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~ 169 (381)
+. .+..|+|-|.||+.++.+|+.+|+ +.-+|+.+++
T Consensus 137 p~~~kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaGaP 174 (581)
T PF11339_consen 137 PDAPKPNLIGNCQGGWAAMMLAALRPDLVGPLVLAGAP 174 (581)
T ss_pred CCCCCceEEeccHHHHHHHHHHhcCcCccCceeecCCC
Confidence 33 599999999999999999999999 5555654433
No 172
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.08 E-value=4.4e-05 Score=68.14 Aligned_cols=113 Identities=19% Similarity=0.182 Sum_probs=77.3
Q ss_pred CCCcEEEEeCCCCCChhc-HHHHHHHhccCC--cEEEEeCCCCCCCCCCCCcCC--CcchhhHHHHHHHHHHhcCCCCcE
Q 016885 64 TPLPCVVYCHGNSGCRAD-ANEAAVILLPSN--ITLFTLDFSGSGLSDGDYVSL--GWHEKDDLKVVVSYLRGNKQTSRI 138 (381)
Q Consensus 64 ~~~p~vv~~HG~~~~~~~-~~~~~~~l~~~G--~~vi~~D~~G~G~S~~~~~~~--~~~~~~d~~~~i~~l~~~~~~~~i 138 (381)
..+.++||+||++.+-.. -...++.....| ...+.+.+|..|.--+-..+. .-+...+++.++.+|.+..+.++|
T Consensus 114 ~~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~I 193 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKRI 193 (377)
T ss_pred CCCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCceE
Confidence 457899999999866543 334455444443 467788888665432211111 011257899999999999888999
Q ss_pred EEEEEchhHHHHHHhhcc----CC-----CccEEEeccCccCHHHHH
Q 016885 139 GLWGRSMGAVTSLLYGAE----DP-----SIAGMVLDSAFSDLFDLM 176 (381)
Q Consensus 139 ~l~G~S~GG~~a~~~a~~----~p-----~v~~vi~~~~~~~~~~~~ 176 (381)
.|++||||.++++....+ .. +++-+|+.+|-.+..-+.
T Consensus 194 ~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~DVF~ 240 (377)
T COG4782 194 YLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDVDVFS 240 (377)
T ss_pred EEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCChhhHH
Confidence 999999999999875543 21 278888888877665433
No 173
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.04 E-value=1.2e-05 Score=68.98 Aligned_cols=88 Identities=17% Similarity=0.128 Sum_probs=47.0
Q ss_pred CCcEEEEeCCCCCChhcHHHHHHHhccC--CcEEEEeCCCCCCCCCCCCcCCCcchhhHHHHHHHHHHhcC---CC--Cc
Q 016885 65 PLPCVVYCHGNSGCRADANEAAVILLPS--NITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNK---QT--SR 137 (381)
Q Consensus 65 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~--G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~i~~l~~~~---~~--~~ 137 (381)
+.-+||++||+.|+...|..+...+... .+.-..+.+.++...... ...+.. .-...+++++.+.. .. .+
T Consensus 3 ~~hLvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~~~-T~~gI~--~~g~rL~~eI~~~~~~~~~~~~~ 79 (217)
T PF05057_consen 3 PVHLVVFVHGLWGNPADMRYLKNHLEKIPEDLPNARIVVLGYSNNEFK-TFDGID--VCGERLAEEILEHIKDYESKIRK 79 (217)
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHHHHHhhhhcchhhhhhhcccccccc-cchhhH--HHHHHHHHHHHHhcccccccccc
Confidence 4568999999999999888776666551 121112222222111100 001111 11122233333322 22 58
Q ss_pred EEEEEEchhHHHHHHhhc
Q 016885 138 IGLWGRSMGAVTSLLYGA 155 (381)
Q Consensus 138 i~l~G~S~GG~~a~~~a~ 155 (381)
|.++||||||.++-.+..
T Consensus 80 IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 80 ISFIGHSLGGLIARYALG 97 (217)
T ss_pred ceEEEecccHHHHHHHHH
Confidence 999999999999865554
No 174
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=97.89 E-value=3.9e-05 Score=70.26 Aligned_cols=104 Identities=17% Similarity=0.120 Sum_probs=77.0
Q ss_pred CCcEEEEeCCCCCChhcHHHHHHHhccCCcE---EEEeCCCCCCCCCCCCcCCCcchhhHHHHHHHHHHhcCCCCcEEEE
Q 016885 65 PLPCVVYCHGNSGCRADANEAAVILLPSNIT---LFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLW 141 (381)
Q Consensus 65 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~---vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~i~l~ 141 (381)
..-.+|++||+++....+..+...+...|+. +..+++++. ..... .....+.+.+.++.+....+..++.++
T Consensus 58 ~~~pivlVhG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~----~~~~~~ql~~~V~~~l~~~ga~~v~Li 132 (336)
T COG1075 58 AKEPIVLVHGLGGGYGNFLPLDYRLAILGWLTNGVYAFELSGG-DGTYS----LAVRGEQLFAYVDEVLAKTGAKKVNLI 132 (336)
T ss_pred CCceEEEEccCcCCcchhhhhhhhhcchHHHhccccccccccc-CCCcc----ccccHHHHHHHHHHHHhhcCCCceEEE
Confidence 3458999999988888888888888888888 888888865 11111 112234555555555555566899999
Q ss_pred EEchhHHHHHHhhccCC--C-ccEEEeccCccCHH
Q 016885 142 GRSMGAVTSLLYGAEDP--S-IAGMVLDSAFSDLF 173 (381)
Q Consensus 142 G~S~GG~~a~~~a~~~p--~-v~~vi~~~~~~~~~ 173 (381)
||||||.++..++...+ . |+.++.++++-...
T Consensus 133 gHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~Gt 167 (336)
T COG1075 133 GHSMGGLDSRYYLGVLGGANRVASVVTLGTPHHGT 167 (336)
T ss_pred eecccchhhHHHHhhcCccceEEEEEEeccCCCCc
Confidence 99999999999999888 3 89999888765443
No 175
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=97.88 E-value=0.00017 Score=65.95 Aligned_cols=129 Identities=13% Similarity=0.081 Sum_probs=84.9
Q ss_pred EEEEcCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhc--HHHHHHHhccC-CcEEEEeCCCCCCCCCCC------
Q 016885 40 LEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD--ANEAAVILLPS-NITLFTLDFSGSGLSDGD------ 110 (381)
Q Consensus 40 v~~~~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~--~~~~~~~l~~~-G~~vi~~D~~G~G~S~~~------ 110 (381)
|++--.+..+|.+.+.+.. .......|+++.|+|++... +..+.+.+|+. +.+|+.+++-|.|..+..
T Consensus 12 vELgikR~sKLEyri~ydd---~Ke~kaIvfiI~GfG~dan~~~~d~~r~~iA~~fnvv~I~V~YHCf~~R~q~~A~~~~ 88 (403)
T PF11144_consen 12 VELGIKRESKLEYRISYDD---EKEIKAIVFIIPGFGADANSNYLDFMREYIAKKFNVVVISVNYHCFCNRPQYGAKFYF 88 (403)
T ss_pred eeecccccceeeEEeecCC---CCCceEEEEEeCCcCCCcchHHHHHHHHHHHHhCCEEEEEeeeeheeeccccCchhcC
Confidence 3444456678888886653 45677899999999998874 34556667764 455566677766533210
Q ss_pred ----------------C-----cC---------------------------------------------CCcchhhHHHH
Q 016885 111 ----------------Y-----VS---------------------------------------------LGWHEKDDLKV 124 (381)
Q Consensus 111 ----------------~-----~~---------------------------------------------~~~~~~~d~~~ 124 (381)
. .. +|.-.+-|...
T Consensus 89 ~~~D~~iLk~~L~~i~i~~~~i~~~~~~~~~~~~L~~~I~~lK~~~~L~~d~kl~ls~tl~P~n~EYQN~GIMqAiD~IN 168 (403)
T PF11144_consen 89 DDIDKEILKKSLEKINIDSESINTYDNAEQIYELLNQNITELKEQGILPQDYKLNLSCTLIPPNGEYQNFGIMQAIDIIN 168 (403)
T ss_pred CHHHHHHHHHHHHHcCccccccccchhHHHHHHHHHHHHHHHHhcCCCCCCcEEeEEEEecCCchhhhhhHHHHHHHHHH
Confidence 0 00 00011335555
Q ss_pred HHHHHHhcCCC--C--cEEEEEEchhHHHHHHhhccCCC-ccEEEeccCccC
Q 016885 125 VVSYLRGNKQT--S--RIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSD 171 (381)
Q Consensus 125 ~i~~l~~~~~~--~--~i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~ 171 (381)
++.++...... . +++++|+|.||++|...|.-.|. +.+++=.+++..
T Consensus 169 Al~~l~k~~~~~~~~lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~ 220 (403)
T PF11144_consen 169 ALLDLKKIFPKNGGGLPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYAL 220 (403)
T ss_pred HHHHHHHhhhcccCCCcEEEEecCcHHHHHHHHHhhCccceeEEEecCcccc
Confidence 66666555432 3 89999999999999999999998 888887776654
No 176
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.87 E-value=0.00012 Score=69.86 Aligned_cols=106 Identities=19% Similarity=0.162 Sum_probs=67.0
Q ss_pred CcEEEEeCCCCCChhcH--HHHHHHhccC-CcEEEEeCCCCCCCCCCCCcC----CCc----chhhHHHHHHHHHHhcCC
Q 016885 66 LPCVVYCHGNSGCRADA--NEAAVILLPS-NITLFTLDFSGSGLSDGDYVS----LGW----HEKDDLKVVVSYLRGNKQ 134 (381)
Q Consensus 66 ~p~vv~~HG~~~~~~~~--~~~~~~l~~~-G~~vi~~D~~G~G~S~~~~~~----~~~----~~~~d~~~~i~~l~~~~~ 134 (381)
.|++|++.|-+.-...+ ..+...||++ |-.++++++|-+|.|...... ..+ +.++|+...+++++.+..
T Consensus 29 gpifl~~ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~ 108 (434)
T PF05577_consen 29 GPIFLYIGGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYN 108 (434)
T ss_dssp SEEEEEE--SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEECCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhc
Confidence 78888886665322221 2234445553 889999999999999732111 111 237899999999986542
Q ss_pred ---CCcEEEEEEchhHHHHHHhhccCCC-ccEEEeccCccC
Q 016885 135 ---TSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSD 171 (381)
Q Consensus 135 ---~~~i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~ 171 (381)
..+++++|-|+||.+|..+-.++|+ +.|.+..+++..
T Consensus 109 ~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 109 TAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQ 149 (434)
T ss_dssp TGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CC
T ss_pred CCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceee
Confidence 2689999999999999999999999 888888777653
No 177
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=97.83 E-value=0.0034 Score=54.27 Aligned_cols=43 Identities=21% Similarity=0.257 Sum_probs=35.2
Q ss_pred HHHhcCCC--CcEEEEEEchhHHHHHHhhccCCC-ccEEEeccCcc
Q 016885 128 YLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFS 170 (381)
Q Consensus 128 ~l~~~~~~--~~i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~ 170 (381)
|+.+.... ++.+++|||+||.+++.....+|+ +.+.++++|..
T Consensus 127 ~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSl 172 (264)
T COG2819 127 FIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSL 172 (264)
T ss_pred HHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecchh
Confidence 44443433 779999999999999999999998 89999888864
No 178
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=97.82 E-value=0.00051 Score=62.13 Aligned_cols=91 Identities=20% Similarity=0.173 Sum_probs=70.8
Q ss_pred CCCcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchhhHHHHHHHHHHhcCCCCcEEEEEE
Q 016885 64 TPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGR 143 (381)
Q Consensus 64 ~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~i~l~G~ 143 (381)
.+.-.-||..|-||-+.--...+..|.++|+.|+.+|-.-+--+.+.+. ....|+..++++...+-+..++.|+|+
T Consensus 258 ~sd~~av~~SGDGGWr~lDk~v~~~l~~~gvpVvGvdsLRYfW~~rtPe----~~a~Dl~r~i~~y~~~w~~~~~~liGy 333 (456)
T COG3946 258 NSDTVAVFYSGDGGWRDLDKEVAEALQKQGVPVVGVDSLRYFWSERTPE----QIAADLSRLIRFYARRWGAKRVLLIGY 333 (456)
T ss_pred CcceEEEEEecCCchhhhhHHHHHHHHHCCCceeeeehhhhhhccCCHH----HHHHHHHHHHHHHHHhhCcceEEEEee
Confidence 3456778888888877777889999999999999999665555554443 226899999999988767799999999
Q ss_pred chhHHHHHHhhccCC
Q 016885 144 SMGAVTSLLYGAEDP 158 (381)
Q Consensus 144 S~GG~~a~~~a~~~p 158 (381)
|+|+=+--..-.+.|
T Consensus 334 SfGADvlP~~~n~L~ 348 (456)
T COG3946 334 SFGADVLPFAYNRLP 348 (456)
T ss_pred cccchhhHHHHHhCC
Confidence 999887765544443
No 179
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=97.74 E-value=0.00024 Score=59.77 Aligned_cols=78 Identities=18% Similarity=0.129 Sum_probs=51.1
Q ss_pred CcEEEEeCCCCCChhcHHHHHHHhccCCcE-EEEeCCCCCCCCCCCCcCCCcchhhHHHHHHHHHHhcCCCCcEEEEEEc
Q 016885 66 LPCVVYCHGNSGCRADANEAAVILLPSNIT-LFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRS 144 (381)
Q Consensus 66 ~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~-vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~i~l~G~S 144 (381)
..+|||..|+|.+...+.++. ...++. ++++|||.-- -|. + + ...++|.|+|+|
T Consensus 11 ~~LilfF~GWg~d~~~f~hL~---~~~~~D~l~~yDYr~l~--------------~d~----~-~---~~y~~i~lvAWS 65 (213)
T PF04301_consen 11 KELILFFAGWGMDPSPFSHLI---LPENYDVLICYDYRDLD--------------FDF----D-L---SGYREIYLVAWS 65 (213)
T ss_pred CeEEEEEecCCCChHHhhhcc---CCCCccEEEEecCcccc--------------ccc----c-c---ccCceEEEEEEe
Confidence 579999999999877665442 123444 4578887311 011 1 1 145899999999
Q ss_pred hhHHHHHHhhccCCCccEEEeccCc
Q 016885 145 MGAVTSLLYGAEDPSIAGMVLDSAF 169 (381)
Q Consensus 145 ~GG~~a~~~a~~~p~v~~vi~~~~~ 169 (381)
||-.+|..+....+ ++..+++++.
T Consensus 66 mGVw~A~~~l~~~~-~~~aiAINGT 89 (213)
T PF04301_consen 66 MGVWAANRVLQGIP-FKRAIAINGT 89 (213)
T ss_pred HHHHHHHHHhccCC-cceeEEEECC
Confidence 99999988766544 5555555543
No 180
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.61 E-value=0.0018 Score=53.41 Aligned_cols=106 Identities=12% Similarity=0.059 Sum_probs=66.8
Q ss_pred CCCCcEEEEeCCCCCCh-hcHH---------------HHHHHhccCCcEEEEeCCCCC---CCCCCCCcCCCcchhhHHH
Q 016885 63 DTPLPCVVYCHGNSGCR-ADAN---------------EAAVILLPSNITLFTLDFSGS---GLSDGDYVSLGWHEKDDLK 123 (381)
Q Consensus 63 ~~~~p~vv~~HG~~~~~-~~~~---------------~~~~~l~~~G~~vi~~D~~G~---G~S~~~~~~~~~~~~~d~~ 123 (381)
..+..++|++||.|--+ ..|. +.++...+.||.|++.+.--. -.+...+.......++.+.
T Consensus 98 t~~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~ 177 (297)
T KOG3967|consen 98 TNPQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAK 177 (297)
T ss_pred cCccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHH
Confidence 35667999999998322 1221 334555667999998875421 1111122111112245555
Q ss_pred HHHHHHHhcCCCCcEEEEEEchhHHHHHHhhccCCC---ccEEEeccC
Q 016885 124 VVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS---IAGMVLDSA 168 (381)
Q Consensus 124 ~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~---v~~vi~~~~ 168 (381)
-+...+........+.++.||+||...+.+..+.++ |.++.+-..
T Consensus 178 yvw~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs 225 (297)
T KOG3967|consen 178 YVWKNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDS 225 (297)
T ss_pred HHHHHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeecc
Confidence 555666555455899999999999999999999886 666665433
No 181
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=97.46 E-value=0.013 Score=50.12 Aligned_cols=100 Identities=15% Similarity=0.120 Sum_probs=63.3
Q ss_pred CCCcEEEEeCCCC-CC--hhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchhhHHHHHHHHHHhcCCC----C
Q 016885 64 TPLPCVVYCHGNS-GC--RADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQT----S 136 (381)
Q Consensus 64 ~~~p~vv~~HG~~-~~--~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~i~~l~~~~~~----~ 136 (381)
.+..+|=|+.|.. |. .-.|..+.+.|+++||.|++.-+.- |... ..........+..+++.+.+..+. -
T Consensus 15 ~P~gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~-tfDH---~~~A~~~~~~f~~~~~~L~~~~~~~~~~l 90 (250)
T PF07082_consen 15 RPKGVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVV-TFDH---QAIAREVWERFERCLRALQKRGGLDPAYL 90 (250)
T ss_pred CCCEEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCC-CCcH---HHHHHHHHHHHHHHHHHHHHhcCCCcccC
Confidence 4666777777765 22 2357889999999999999987742 1100 000001133455566666655332 3
Q ss_pred cEEEEEEchhHHHHHHhhccCCC-ccEEEecc
Q 016885 137 RIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDS 167 (381)
Q Consensus 137 ~i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~ 167 (381)
++.=+|||||+-+-+.+....+. -++-++++
T Consensus 91 P~~~vGHSlGcklhlLi~s~~~~~r~gniliS 122 (250)
T PF07082_consen 91 PVYGVGHSLGCKLHLLIGSLFDVERAGNILIS 122 (250)
T ss_pred CeeeeecccchHHHHHHhhhccCcccceEEEe
Confidence 67889999999999988876643 45555554
No 182
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.43 E-value=0.00036 Score=68.06 Aligned_cols=96 Identities=17% Similarity=0.217 Sum_probs=60.5
Q ss_pred CCcEEEEeCCCCCChhcHHHHHHHhcc----------------CCcEEEEeCCCC-----CCCCCCCCcCCCcchhhHHH
Q 016885 65 PLPCVVYCHGNSGCRADANEAAVILLP----------------SNITLFTLDFSG-----SGLSDGDYVSLGWHEKDDLK 123 (381)
Q Consensus 65 ~~p~vv~~HG~~~~~~~~~~~~~~l~~----------------~G~~vi~~D~~G-----~G~S~~~~~~~~~~~~~d~~ 123 (381)
..=.|+|++|..|+-.+.+.++..... ..|..+++|+-+ ||.+- ....+-+.
T Consensus 88 sGIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe~tAm~G~~l-------~dQtEYV~ 160 (973)
T KOG3724|consen 88 SGIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEEFTAMHGHIL-------LDQTEYVN 160 (973)
T ss_pred CCceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccchhhhhccHhH-------HHHHHHHH
Confidence 456899999999998877766654431 235667777643 12110 11245666
Q ss_pred HHHHHHHhcCCC---------CcEEEEEEchhHHHHHHhhccCCC----ccEEEecc
Q 016885 124 VVVSYLRGNKQT---------SRIGLWGRSMGAVTSLLYGAEDPS----IAGMVLDS 167 (381)
Q Consensus 124 ~~i~~l~~~~~~---------~~i~l~G~S~GG~~a~~~a~~~p~----v~~vi~~~ 167 (381)
++|.++.+.+.. ..|+++||||||.+|...+..-.. |.-++..+
T Consensus 161 dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITls 217 (973)
T KOG3724|consen 161 DAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLS 217 (973)
T ss_pred HHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhc
Confidence 777777665422 349999999999999876654211 55555444
No 183
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=97.33 E-value=0.008 Score=57.06 Aligned_cols=135 Identities=16% Similarity=0.217 Sum_probs=80.9
Q ss_pred EEEcCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhcHHHHHHH----hc--------c------CCcEEEEeCCC
Q 016885 41 EIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVI----LL--------P------SNITLFTLDFS 102 (381)
Q Consensus 41 ~~~~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~----l~--------~------~G~~vi~~D~~ 102 (381)
.+....+..+.+++|.... .....|+||++.|+.|++..+..+.+. +. . +-.+++-+|.|
T Consensus 17 ~~~~~~~~~lfyw~~~s~~--~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~an~l~iD~P 94 (415)
T PF00450_consen 17 PVNDNENAHLFYWFFESRN--DPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNKFANLLFIDQP 94 (415)
T ss_dssp EECTTTTEEEEEEEEE-SS--GGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGGTSEEEEE--S
T ss_pred ecCCCCCcEEEEEEEEeCC--CCCCccEEEEecCCceeccccccccccCceEEeecccccccccccccccccceEEEeec
Confidence 3444477889987775543 346789999999999988766433210 11 1 12589999955
Q ss_pred -CCCCCCCCCcCC-Ccch---hhHHHHHHHHHHhcCC-C--CcEEEEEEchhHHHHHHhhcc----C-----CC--ccEE
Q 016885 103 -GSGLSDGDYVSL-GWHE---KDDLKVVVSYLRGNKQ-T--SRIGLWGRSMGAVTSLLYGAE----D-----PS--IAGM 163 (381)
Q Consensus 103 -G~G~S~~~~~~~-~~~~---~~d~~~~i~~l~~~~~-~--~~i~l~G~S~GG~~a~~~a~~----~-----p~--v~~v 163 (381)
|.|.|....... .+.. ++|+..++..+....+ . .++.|+|-|+||..+..+|.. . +. ++|+
T Consensus 95 vGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi 174 (415)
T PF00450_consen 95 VGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGI 174 (415)
T ss_dssp TTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEE
T ss_pred CceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccc
Confidence 899987544332 2222 4555555543333332 2 589999999999987666543 2 13 8999
Q ss_pred EeccCccCHHHHHH
Q 016885 164 VLDSAFSDLFDLML 177 (381)
Q Consensus 164 i~~~~~~~~~~~~~ 177 (381)
++.+|..+......
T Consensus 175 ~IGng~~dp~~~~~ 188 (415)
T PF00450_consen 175 AIGNGWIDPRIQYN 188 (415)
T ss_dssp EEESE-SBHHHHHH
T ss_pred eecCccccccccce
Confidence 99999998765443
No 184
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=97.23 E-value=0.0012 Score=65.10 Aligned_cols=116 Identities=22% Similarity=0.320 Sum_probs=72.5
Q ss_pred EEEEEeecCCCCCCCCCcEEEEeCCCCC---ChhcH--HHHHHHhccCCcEEEEeCCC----CCCCCC--CCCcCCCcch
Q 016885 50 LQCSHYMPSPFPEDTPLPCVVYCHGNSG---CRADA--NEAAVILLPSNITLFTLDFS----GSGLSD--GDYVSLGWHE 118 (381)
Q Consensus 50 l~~~~~~P~~~~~~~~~p~vv~~HG~~~---~~~~~--~~~~~~l~~~G~~vi~~D~~----G~G~S~--~~~~~~~~~~ 118 (381)
|...+|.|......+ .|++|++||++- +...+ ......+..+...|+++.+| |+.... ..+...+
T Consensus 97 LylNV~tp~~~~~~~-~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~g--- 172 (545)
T KOG1516|consen 97 LYLNVYTPQGCSESK-LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLG--- 172 (545)
T ss_pred ceEEEeccCCCccCC-CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCccc---
Confidence 444578886422212 899999999983 32222 22233455557889999988 221111 1122222
Q ss_pred hhHHHHHHHHHHhcC-----CCCcEEEEEEchhHHHHHHhhccCC--C-ccEEEeccCc
Q 016885 119 KDDLKVVVSYLRGNK-----QTSRIGLWGRSMGAVTSLLYGAEDP--S-IAGMVLDSAF 169 (381)
Q Consensus 119 ~~d~~~~i~~l~~~~-----~~~~i~l~G~S~GG~~a~~~a~~~p--~-v~~vi~~~~~ 169 (381)
..|...+++|+++.. +.++|.|+|||.||..+..+...-. . +..+|..++.
T Consensus 173 l~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~ 231 (545)
T KOG1516|consen 173 LFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGN 231 (545)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccc
Confidence 468899999998864 2289999999999999876655321 1 5555655544
No 185
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=97.23 E-value=0.0017 Score=58.07 Aligned_cols=148 Identities=17% Similarity=0.206 Sum_probs=96.7
Q ss_pred CCCcEEEEEEchhHHHHHHhhccCCCccEEEecc-CccCHHHHHHHHHHHhhhhCCcccHHHHHHHHHHHhhhhhh----
Q 016885 134 QTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDS-AFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAK---- 208 (381)
Q Consensus 134 ~~~~i~l~G~S~GG~~a~~~a~~~p~v~~vi~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 208 (381)
.++.+.+-|.|--|+.++..|..+|++.++|... -..+....+....+.++...|........+-+...+.....
T Consensus 232 ~Ik~F~VTGaSKRgWttwLTAIaDprv~aIvp~v~D~Lni~a~L~hiyrsYGgnwpi~l~pyyaegi~erl~tp~fkqL~ 311 (507)
T COG4287 232 EIKGFMVTGASKRGWTTWLTAIADPRVFAIVPFVYDNLNIEAQLLHIYRSYGGNWPIKLAPYYAEGIDERLETPLFKQLL 311 (507)
T ss_pred eeeeEEEeccccchHHHHHHHhcCcchhhhhhhHHhhcccHHHHHHHHHhhCCCCCcccchhHhhhHHHhhcCHHHHHHH
Confidence 4488999999999999999999999988887533 33455666666666666555433222222222221111110
Q ss_pred --ccccccchhhcCCCCCCcEEEEeeCCCCccChHHHHHHHHHcCCCceEEEeCC-CCCCCChhhHHHHHHHHHHhh
Q 016885 209 --FDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSSRPQFYYDSVSIFFYNV 282 (381)
Q Consensus 209 --~~~~~~~~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~g-gH~~~~~~~~~~~i~~fl~~~ 282 (381)
.+...+.......++.+|-.++.|..|.+..+..+.-.++.+++.+.+.+++. .|.... ....+.+..|+.+.
T Consensus 312 ~IiDPlay~~try~~RLalpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~~n-~~i~esl~~flnrf 387 (507)
T COG4287 312 EIIDPLAYRNTRYQLRLALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNLIN-QFIKESLEPFLNRF 387 (507)
T ss_pred HhhcHHHHhhhhhhhhccccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchhhH-HHHHHHHHHHHHHH
Confidence 11111111123367889999999999999999999999999999989999988 887652 23444455555443
No 186
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=97.17 E-value=0.0016 Score=48.53 Aligned_cols=57 Identities=14% Similarity=0.196 Sum_probs=45.6
Q ss_pred CCcEEEEeeCCCCccChHHHHHHHHHcCCCceEEEeCC-CCCCC-Ch-hhHHHHHHHHHHh
Q 016885 224 FIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS-RP-QFYYDSVSIFFYN 281 (381)
Q Consensus 224 ~~Pvlii~G~~D~~v~~~~~~~l~~~~~~~~~~~~~~g-gH~~~-~~-~~~~~~i~~fl~~ 281 (381)
..|+|++.++.|+++|.+.++.+.+.+++. .++..++ ||... .. .-..+.+.+||..
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~s-~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPGS-RLVTVDGAGHGVYAGGSPCVDKAVDDYLLD 93 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCCc-eEEEEeccCcceecCCChHHHHHHHHHHHc
Confidence 589999999999999999999999999884 7777777 99865 33 3445556678753
No 187
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.14 E-value=0.0013 Score=61.63 Aligned_cols=83 Identities=13% Similarity=-0.003 Sum_probs=60.1
Q ss_pred cHHHHHHHhccCCcE-----EEE-eCCCCCCCCCCCCcCCCcchhhHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhh
Q 016885 81 DANEAAVILLPSNIT-----LFT-LDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYG 154 (381)
Q Consensus 81 ~~~~~~~~l~~~G~~-----vi~-~D~~G~G~S~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a 154 (381)
.|..+++.|.+.||. ..+ +|+|- +.. ........+...|+.+.+.. .++|.|+||||||.++..+.
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~---~~~----~~~~~~~~lk~~ie~~~~~~-~~kv~li~HSmGgl~~~~fl 137 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRL---SPA----ERDEYFTKLKQLIEEAYKKN-GKKVVLIAHSMGGLVARYFL 137 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhh---chh----hHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCchHHHHHH
Confidence 688999999988773 223 78873 221 00022467888888877765 68999999999999999888
Q ss_pred ccCC-------CccEEEeccCccC
Q 016885 155 AEDP-------SIAGMVLDSAFSD 171 (381)
Q Consensus 155 ~~~p-------~v~~vi~~~~~~~ 171 (381)
...+ .|+++|.++++..
T Consensus 138 ~~~~~~~W~~~~i~~~i~i~~p~~ 161 (389)
T PF02450_consen 138 QWMPQEEWKDKYIKRFISIGTPFG 161 (389)
T ss_pred HhccchhhHHhhhhEEEEeCCCCC
Confidence 7653 2899998887653
No 188
>PLN02606 palmitoyl-protein thioesterase
Probab=97.11 E-value=0.0025 Score=56.31 Aligned_cols=99 Identities=11% Similarity=0.092 Sum_probs=59.5
Q ss_pred CcEEEEeCCCC--CChhcHHHHHHHhccC-CcEEEEeCCCCCCCCCCCCcCCCcchhhHHHHHHHHHHhcCCC-CcEEEE
Q 016885 66 LPCVVYCHGNS--GCRADANEAAVILLPS-NITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQT-SRIGLW 141 (381)
Q Consensus 66 ~p~vv~~HG~~--~~~~~~~~~~~~l~~~-G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~i~~l~~~~~~-~~i~l~ 141 (381)
..+||+.||.| .+...+..+.+.+.+. |+.+..+. .|-+...+-+. ...+.+..+.+.+.+.... +-+.++
T Consensus 26 ~~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~~~s~~~----~~~~Qv~~vce~l~~~~~L~~G~naI 100 (306)
T PLN02606 26 SVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGVQDSLFM----PLRQQASIACEKIKQMKELSEGYNIV 100 (306)
T ss_pred CCCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCccccccc----CHHHHHHHHHHHHhcchhhcCceEEE
Confidence 45678889999 4555667777766422 55544444 23222111111 1123444444444443222 569999
Q ss_pred EEchhHHHHHHhhccCCC---ccEEEeccCc
Q 016885 142 GRSMGAVTSLLYGAEDPS---IAGMVLDSAF 169 (381)
Q Consensus 142 G~S~GG~~a~~~a~~~p~---v~~vi~~~~~ 169 (381)
|+|.||.++-.++.+.++ |+-+|.+++.
T Consensus 101 GfSQGglflRa~ierc~~~p~V~nlISlggp 131 (306)
T PLN02606 101 AESQGNLVARGLIEFCDNAPPVINYVSLGGP 131 (306)
T ss_pred EEcchhHHHHHHHHHCCCCCCcceEEEecCC
Confidence 999999999999888644 8888886653
No 189
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.02 E-value=0.0025 Score=57.99 Aligned_cols=101 Identities=19% Similarity=0.231 Sum_probs=71.0
Q ss_pred cEEEEeCCCCCChhcHHH---HHHHhcc-CCcEEEEeCCCCCCCCCC--CC-----cCCCc----chhhHHHHHHHHHHh
Q 016885 67 PCVVYCHGNSGCRADANE---AAVILLP-SNITLFTLDFSGSGLSDG--DY-----VSLGW----HEKDDLKVVVSYLRG 131 (381)
Q Consensus 67 p~vv~~HG~~~~~~~~~~---~~~~l~~-~G~~vi~~D~~G~G~S~~--~~-----~~~~~----~~~~d~~~~i~~l~~ 131 (381)
..|++--|.-|+.+.+.. +...++. .+..++-.++|-+|+|.. .. ...++ +...|....+.+++.
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~ 160 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKR 160 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhh
Confidence 667777888877765532 2223333 367788999999999862 11 11111 226788999999988
Q ss_pred cCCC--CcEEEEEEchhHHHHHHhhccCCC-ccEEEecc
Q 016885 132 NKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDS 167 (381)
Q Consensus 132 ~~~~--~~i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~ 167 (381)
.... .+|+++|-|+||+++..+=.++|. +.|....+
T Consensus 161 ~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaS 199 (492)
T KOG2183|consen 161 DLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAAS 199 (492)
T ss_pred ccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhcc
Confidence 7543 799999999999999999999998 45544433
No 190
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=97.01 E-value=0.003 Score=42.06 Aligned_cols=49 Identities=20% Similarity=0.283 Sum_probs=27.7
Q ss_pred ceeeEEEEEEcCCCeEEEEEEeecCC--CCCCCCCcEEEEeCCCCCChhcH
Q 016885 34 SYKRQDLEIRNARGHVLQCSHYMPSP--FPEDTPLPCVVYCHGNSGCRADA 82 (381)
Q Consensus 34 ~~~~~~v~~~~~dg~~l~~~~~~P~~--~~~~~~~p~vv~~HG~~~~~~~~ 82 (381)
.|.-++..+.+.||..|......+.. .....++|+|++.||+.+++..|
T Consensus 9 GY~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~w 59 (63)
T PF04083_consen 9 GYPCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDW 59 (63)
T ss_dssp T---EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGG
T ss_pred CCCcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHH
Confidence 34555778899999999976544332 12346789999999999988876
No 191
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=96.96 E-value=0.0065 Score=52.18 Aligned_cols=98 Identities=12% Similarity=0.136 Sum_probs=62.4
Q ss_pred cEEEEeCCCCCChhc--HHHHHHHhccC-CcEEEEeCCCCCCCCCCCCcCCCcchhhHHHHHHHHHHhcCCC-CcEEEEE
Q 016885 67 PCVVYCHGNSGCRAD--ANEAAVILLPS-NITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQT-SRIGLWG 142 (381)
Q Consensus 67 p~vv~~HG~~~~~~~--~~~~~~~l~~~-G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~i~~l~~~~~~-~~i~l~G 142 (381)
-.+|++||.+.+... +..+.+.+.+. |..|++.|. |-|.-.... ..- .+.+..+.+.+...... +-+.++|
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g~~~s~l-~pl---~~Qv~~~ce~v~~m~~lsqGynivg 98 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDGIKDSSL-MPL---WEQVDVACEKVKQMPELSQGYNIVG 98 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCCcchhhh-ccH---HHHHHHHHHHHhcchhccCceEEEE
Confidence 567788999976655 55666655554 888999987 444111111 111 23444444555433333 6789999
Q ss_pred EchhHHHHHHhhccCCC--ccEEEeccCc
Q 016885 143 RSMGAVTSLLYGAEDPS--IAGMVLDSAF 169 (381)
Q Consensus 143 ~S~GG~~a~~~a~~~p~--v~~vi~~~~~ 169 (381)
.|.||.++-.++..-++ ++..|.+++.
T Consensus 99 ~SQGglv~Raliq~cd~ppV~n~ISL~gP 127 (296)
T KOG2541|consen 99 YSQGGLVARALIQFCDNPPVKNFISLGGP 127 (296)
T ss_pred EccccHHHHHHHHhCCCCCcceeEeccCC
Confidence 99999999888876554 8888876543
No 192
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=96.93 E-value=0.28 Score=46.20 Aligned_cols=109 Identities=20% Similarity=0.188 Sum_probs=69.1
Q ss_pred CCCCCCcEEEEeCCCCCChhcHHHHHHHhccCCcEEE-EeCCCCCCCCCCCCcCCCcch-hhHHHHHHHHHHhcCCC--C
Q 016885 61 PEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLF-TLDFSGSGLSDGDYVSLGWHE-KDDLKVVVSYLRGNKQT--S 136 (381)
Q Consensus 61 ~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi-~~D~~G~G~S~~~~~~~~~~~-~~d~~~~i~~l~~~~~~--~ 136 (381)
|++-+.|+.|+.-|+-. .+.+.... .+.+.|...+ .-|.|=-|.+= ..+..+ -..+.++|+...+..+. +
T Consensus 284 PGD~KPPL~VYFSGyR~-aEGFEgy~-MMk~Lg~PfLL~~DpRleGGaF----YlGs~eyE~~I~~~I~~~L~~LgF~~~ 357 (511)
T TIGR03712 284 PGDFKPPLNVYFSGYRP-AEGFEGYF-MMKRLGAPFLLIGDPRLEGGAF----YLGSDEYEQGIINVIQEKLDYLGFDHD 357 (511)
T ss_pred CcCCCCCeEEeeccCcc-cCcchhHH-HHHhcCCCeEEeecccccccee----eeCcHHHHHHHHHHHHHHHHHhCCCHH
Confidence 46778899999999975 44443221 2223344444 44666554431 111111 23455555544444455 7
Q ss_pred cEEEEEEchhHHHHHHhhccCCCccEEEeccCccCHHHHH
Q 016885 137 RIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLM 176 (381)
Q Consensus 137 ~i~l~G~S~GG~~a~~~a~~~p~v~~vi~~~~~~~~~~~~ 176 (381)
.++|-|.|||.+-|+.+++... ..++|+.-|..++-...
T Consensus 358 qLILSGlSMGTfgAlYYga~l~-P~AIiVgKPL~NLGtiA 396 (511)
T TIGR03712 358 QLILSGLSMGTFGALYYGAKLS-PHAIIVGKPLVNLGTIA 396 (511)
T ss_pred HeeeccccccchhhhhhcccCC-CceEEEcCcccchhhhh
Confidence 8999999999999999998754 58999888888776543
No 193
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=96.87 E-value=0.012 Score=55.83 Aligned_cols=126 Identities=16% Similarity=0.197 Sum_probs=75.2
Q ss_pred CCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhcHHHHH---H-------------HhccC------CcEEEEeC-C
Q 016885 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAA---V-------------ILLPS------NITLFTLD-F 101 (381)
Q Consensus 45 ~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~---~-------------~l~~~------G~~vi~~D-~ 101 (381)
..+..+.++++.... .....|+|+++-|+.|++.....+. . .+..+ -.+++-+| .
T Consensus 47 ~~~~~lfy~f~es~~--~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqP 124 (433)
T PLN03016 47 DENVQFFYYFIKSEN--NPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMANIIFLDQP 124 (433)
T ss_pred CCCeEEEEEEEecCC--CcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhcCcEEEecCC
Confidence 345677776665432 3456899999999998876432111 1 11111 25788899 5
Q ss_pred CCCCCCCCCCcCCCcc---hhhHHHHHHH-HHHhcCC--CCcEEEEEEchhHHHHHHhhcc----C-----C--CccEEE
Q 016885 102 SGSGLSDGDYVSLGWH---EKDDLKVVVS-YLRGNKQ--TSRIGLWGRSMGAVTSLLYGAE----D-----P--SIAGMV 164 (381)
Q Consensus 102 ~G~G~S~~~~~~~~~~---~~~d~~~~i~-~l~~~~~--~~~i~l~G~S~GG~~a~~~a~~----~-----p--~v~~vi 164 (381)
-|.|.|.......... .++++...+. |+...+. ..++.|.|.|+||..+..+|.. + + +++|++
T Consensus 125 vGtGfSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~ 204 (433)
T PLN03016 125 VGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYM 204 (433)
T ss_pred CCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeE
Confidence 5889886432211111 1334444443 3333332 2789999999999866655442 2 2 288999
Q ss_pred eccCccCH
Q 016885 165 LDSAFSDL 172 (381)
Q Consensus 165 ~~~~~~~~ 172 (381)
+-+|..+.
T Consensus 205 iGNg~t~~ 212 (433)
T PLN03016 205 LGNPVTYM 212 (433)
T ss_pred ecCCCcCc
Confidence 98887654
No 194
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=96.81 E-value=0.0014 Score=57.41 Aligned_cols=102 Identities=14% Similarity=0.125 Sum_probs=49.0
Q ss_pred CCcEEEEeCCCCCCh---hcHHHH---HHHhccCCcEEEEeCCCCCCCCCCCCcCCCcch-hhHHHHHHHHHHhcCCC-C
Q 016885 65 PLPCVVYCHGNSGCR---ADANEA---AVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE-KDDLKVVVSYLRGNKQT-S 136 (381)
Q Consensus 65 ~~p~vv~~HG~~~~~---~~~~~~---~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~-~~d~~~~i~~l~~~~~~-~ 136 (381)
+..+||+.||.|.+. ..+..+ ++.... |..|..++.- -+.+....... +.. -+.+..+.+.+.+.... +
T Consensus 4 ~~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~P-G~yV~si~ig-~~~~~D~~~s~-f~~v~~Qv~~vc~~l~~~p~L~~ 80 (279)
T PF02089_consen 4 SPLPVVIWHGMGDSCCNPSSMGSIKELIEEQHP-GTYVHSIEIG-NDPSEDVENSF-FGNVNDQVEQVCEQLANDPELAN 80 (279)
T ss_dssp SS--EEEE--TT--S--TTTHHHHHHHHHHHST-T--EEE--SS-SSHHHHHHHHH-HSHHHHHHHHHHHHHHH-GGGTT
T ss_pred CCCcEEEEEcCccccCChhHHHHHHHHHHHhCC-CceEEEEEEC-CCcchhhhhhH-HHHHHHHHHHHHHHHhhChhhhc
Confidence 345788889999643 234433 333333 7778888773 22111000000 011 12233334444443322 5
Q ss_pred cEEEEEEchhHHHHHHhhccCCC--ccEEEeccCc
Q 016885 137 RIGLWGRSMGAVTSLLYGAEDPS--IAGMVLDSAF 169 (381)
Q Consensus 137 ~i~l~G~S~GG~~a~~~a~~~p~--v~~vi~~~~~ 169 (381)
-+.++|+|.||.+.-.++.+.+. |+-+|.+++.
T Consensus 81 G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggp 115 (279)
T PF02089_consen 81 GFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGP 115 (279)
T ss_dssp -EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--
T ss_pred ceeeeeeccccHHHHHHHHHCCCCCceeEEEecCc
Confidence 79999999999999999998765 8888886653
No 195
>PLN02209 serine carboxypeptidase
Probab=96.70 E-value=0.042 Score=52.24 Aligned_cols=132 Identities=16% Similarity=0.186 Sum_probs=77.7
Q ss_pred EEEEcCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhcHHHHHH----------------HhccC------CcEEE
Q 016885 40 LEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAV----------------ILLPS------NITLF 97 (381)
Q Consensus 40 v~~~~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~----------------~l~~~------G~~vi 97 (381)
+.+....+..+.++++... ......|+|+++-|+.|++..+..+.+ .+..+ -.+++
T Consensus 44 ~~v~~~~~~~lf~~f~es~--~~~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anll 121 (437)
T PLN02209 44 IGIGEEENVQFFYYFIKSD--KNPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTANII 121 (437)
T ss_pred EEecCCCCeEEEEEEEecC--CCCCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhhcCcEE
Confidence 3344344667776655443 234568999999999988765422211 11111 25788
Q ss_pred EeC-CCCCCCCCCCCc-CCC--cchhhHHHHHHHHHHhcC-CC--CcEEEEEEchhHHHHHHhhcc----C-----CC--
Q 016885 98 TLD-FSGSGLSDGDYV-SLG--WHEKDDLKVVVSYLRGNK-QT--SRIGLWGRSMGAVTSLLYGAE----D-----PS-- 159 (381)
Q Consensus 98 ~~D-~~G~G~S~~~~~-~~~--~~~~~d~~~~i~~l~~~~-~~--~~i~l~G~S~GG~~a~~~a~~----~-----p~-- 159 (381)
-+| ..|.|.|..... ... ...++|+..++..+.+.. .. .++.|+|.|+||..+..+|.. + +.
T Consensus 122 fiDqPvGtGfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~in 201 (437)
T PLN02209 122 FLDQPVGSGFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPIN 201 (437)
T ss_pred EecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCcee
Confidence 889 558888853321 111 112445544444333332 22 689999999999866555532 2 22
Q ss_pred ccEEEeccCccCHH
Q 016885 160 IAGMVLDSAFSDLF 173 (381)
Q Consensus 160 v~~vi~~~~~~~~~ 173 (381)
++|+++.++..+..
T Consensus 202 l~Gi~igng~td~~ 215 (437)
T PLN02209 202 LQGYVLGNPITHIE 215 (437)
T ss_pred eeeEEecCcccChh
Confidence 78999999887653
No 196
>PLN02633 palmitoyl protein thioesterase family protein
Probab=96.46 E-value=0.023 Score=50.44 Aligned_cols=99 Identities=13% Similarity=0.070 Sum_probs=57.6
Q ss_pred CcEEEEeCCCCCChh--cHHHHHHHhccC-CcEEEEeCCCCCCCCCCCCcCCCcchhhHHHHHHHHHHhcCCC-CcEEEE
Q 016885 66 LPCVVYCHGNSGCRA--DANEAAVILLPS-NITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQT-SRIGLW 141 (381)
Q Consensus 66 ~p~vv~~HG~~~~~~--~~~~~~~~l~~~-G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~i~~l~~~~~~-~~i~l~ 141 (381)
.-++|+.||.|.+.. .+..+.+.+.+. |..+.++.. |-+.. ..+-....+.+..+.+.+...... +-+.++
T Consensus 25 ~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i-g~~~~----~s~~~~~~~Qve~vce~l~~~~~l~~G~naI 99 (314)
T PLN02633 25 SVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI-GNGVG----DSWLMPLTQQAEIACEKVKQMKELSQGYNIV 99 (314)
T ss_pred CCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE-CCCcc----ccceeCHHHHHHHHHHHHhhchhhhCcEEEE
Confidence 346777899996543 345555555332 566666544 32211 111101123344444444442222 469999
Q ss_pred EEchhHHHHHHhhccCCC---ccEEEeccCc
Q 016885 142 GRSMGAVTSLLYGAEDPS---IAGMVLDSAF 169 (381)
Q Consensus 142 G~S~GG~~a~~~a~~~p~---v~~vi~~~~~ 169 (381)
|+|.||.++-.++.+.++ |+.+|.+++.
T Consensus 100 GfSQGGlflRa~ierc~~~p~V~nlISlggp 130 (314)
T PLN02633 100 GRSQGNLVARGLIEFCDGGPPVYNYISLAGP 130 (314)
T ss_pred EEccchHHHHHHHHHCCCCCCcceEEEecCC
Confidence 999999999988887653 8888886643
No 197
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=96.42 E-value=0.0062 Score=58.55 Aligned_cols=86 Identities=14% Similarity=0.020 Sum_probs=57.3
Q ss_pred cHHHHHHHhccCCcE-----EEEeCCCCCCCCCCCCcCCCcchhhHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhhc
Q 016885 81 DANEAAVILLPSNIT-----LFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGA 155 (381)
Q Consensus 81 ~~~~~~~~l~~~G~~-----vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~ 155 (381)
.|..+++.|++.||. ...+|+| .+...... .-.....+...|+.+.+..+.++|+|+||||||.+++.+..
T Consensus 157 vw~kLIe~L~~iGY~~~nL~gAPYDWR---ls~~~le~-rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~ 232 (642)
T PLN02517 157 VWAVLIANLARIGYEEKNMYMAAYDWR---LSFQNTEV-RDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMK 232 (642)
T ss_pred eHHHHHHHHHHcCCCCCceeecccccc---cCccchhh-hhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHH
Confidence 457889999999985 3344444 12111100 01124678888888877656689999999999999998765
Q ss_pred cC-----------CC-----ccEEEeccCcc
Q 016885 156 ED-----------PS-----IAGMVLDSAFS 170 (381)
Q Consensus 156 ~~-----------p~-----v~~vi~~~~~~ 170 (381)
.. ++ |++.|.+++..
T Consensus 233 wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~ 263 (642)
T PLN02517 233 WVEAPAPMGGGGGPGWCAKHIKAVMNIGGPF 263 (642)
T ss_pred hccccccccCCcchHHHHHHHHHheeccccc
Confidence 32 11 78888887654
No 198
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.32 E-value=0.0066 Score=48.89 Aligned_cols=50 Identities=12% Similarity=0.057 Sum_probs=33.2
Q ss_pred hHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhhccCC-----CccEEEeccCc
Q 016885 120 DDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDP-----SIAGMVLDSAF 169 (381)
Q Consensus 120 ~d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~p-----~v~~vi~~~~~ 169 (381)
..+...++......+..+|.++|||+||.+|..++.... ....++..+++
T Consensus 12 ~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p 66 (153)
T cd00741 12 NLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPP 66 (153)
T ss_pred HHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCC
Confidence 344445555544446689999999999999998887653 23445554444
No 199
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=96.27 E-value=0.0072 Score=47.72 Aligned_cols=50 Identities=14% Similarity=0.117 Sum_probs=32.3
Q ss_pred HHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhhccC--------CCccEEEeccCcc
Q 016885 121 DLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAED--------PSIAGMVLDSAFS 170 (381)
Q Consensus 121 d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~--------p~v~~vi~~~~~~ 170 (381)
.+.+.+..+.+.....+|.+.|||+||.+|..++... ..+..+..-+|..
T Consensus 49 ~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l~~~~~~~~~~~~~~~fg~P~~ 106 (140)
T PF01764_consen 49 QILDALKELVEKYPDYSIVITGHSLGGALASLAAADLASHGPSSSSNVKCYTFGAPRV 106 (140)
T ss_dssp HHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHHHHCTTTSTTTEEEEEES-S--
T ss_pred HHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhhhhcccccccceeeeecCCccc
Confidence 4445555555555558999999999999998877652 1256666655554
No 200
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=96.20 E-value=0.035 Score=52.11 Aligned_cols=128 Identities=16% Similarity=0.090 Sum_probs=85.6
Q ss_pred EEcCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhcH-----HHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCC-
Q 016885 42 IRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADA-----NEAAVILLPSNITLFTLDFSGSGLSDGDYVSLG- 115 (381)
Q Consensus 42 ~~~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~-----~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~- 115 (381)
|.+.++....=+.|.+... .....|..|+|.|=|.....| ..+.....+.|-.|+..++|-+|.|........
T Consensus 63 F~~~~~~~~Qq~~y~n~~~-~~~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~ 141 (514)
T KOG2182|consen 63 FDSSNGKFFQQRFYNNNQW-AKPGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTS 141 (514)
T ss_pred hhcchhhhhhhheeecccc-ccCCCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCccc
Confidence 4444443333334444321 145679999999988655333 133444455689999999999998853221111
Q ss_pred -------cchhhHHHHHHHHHHhcCCC---CcEEEEEEchhHHHHHHhhccCCC-ccEEEeccCcc
Q 016885 116 -------WHEKDDLKVVVSYLRGNKQT---SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFS 170 (381)
Q Consensus 116 -------~~~~~d~~~~i~~l~~~~~~---~~i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~ 170 (381)
.+...|+...|+.+..+.+. .+.+.+|-|+-|.++..+=.++|+ +.|.|..+++.
T Consensus 142 nlk~LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv 207 (514)
T KOG2182|consen 142 NLKYLSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPV 207 (514)
T ss_pred chhhhhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccce
Confidence 12367888888888777644 389999999999999999999999 66666666544
No 201
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=96.16 E-value=0.02 Score=54.50 Aligned_cols=101 Identities=15% Similarity=0.128 Sum_probs=63.8
Q ss_pred CCCCcEEEEeCCCCC---ChhcHHHHHH-HhccCCcEEEEeCCCCCCCCCCCCcCCCcchhhHHHHHHHHHHhcC---CC
Q 016885 63 DTPLPCVVYCHGNSG---CRADANEAAV-ILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNK---QT 135 (381)
Q Consensus 63 ~~~~p~vv~~HG~~~---~~~~~~~~~~-~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~i~~l~~~~---~~ 135 (381)
..++-+|+.+||+|- +........+ +....|..|+.+||.= .+..+.+. ..+.+.-+.-|+.++. +.
T Consensus 393 p~S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdYSL---APEaPFPR---aleEv~fAYcW~inn~allG~ 466 (880)
T KOG4388|consen 393 PRSRSLIVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDYSL---APEAPFPR---ALEEVFFAYCWAINNCALLGS 466 (880)
T ss_pred CCCceEEEEecCCceeeeccccccHHHHHHHHHhCCCeEEeeecc---CCCCCCCc---HHHHHHHHHHHHhcCHHHhCc
Confidence 456779999999982 2222233333 3333589999999862 23333322 2466666777887764 22
Q ss_pred --CcEEEEEEchhHHHHHHhhc----cCCC-ccEEEeccCc
Q 016885 136 --SRIGLWGRSMGAVTSLLYGA----EDPS-IAGMVLDSAF 169 (381)
Q Consensus 136 --~~i~l~G~S~GG~~a~~~a~----~~p~-v~~vi~~~~~ 169 (381)
++|+++|-|.||.+.+..+. ..-+ .+|+++..+.
T Consensus 467 TgEriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~p 507 (880)
T KOG4388|consen 467 TGERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPP 507 (880)
T ss_pred ccceEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecCh
Confidence 89999999999986654443 3334 5788775543
No 202
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=95.97 E-value=0.019 Score=49.62 Aligned_cols=52 Identities=10% Similarity=0.068 Sum_probs=35.6
Q ss_pred hHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhhccC------CCccEEEeccCccC
Q 016885 120 DDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAED------PSIAGMVLDSAFSD 171 (381)
Q Consensus 120 ~d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~------p~v~~vi~~~~~~~ 171 (381)
.++...+..++++.+..+|.+.|||+||.+|..++... ..+.++..-+|...
T Consensus 112 ~~~~~~~~~~~~~~p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~vg 169 (229)
T cd00519 112 NQVLPELKSALKQYPDYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPRVG 169 (229)
T ss_pred HHHHHHHHHHHhhCCCceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCCCC
Confidence 34445555555555568999999999999998877642 22666666666553
No 203
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=95.93 E-value=0.013 Score=54.63 Aligned_cols=76 Identities=14% Similarity=-0.039 Sum_probs=53.1
Q ss_pred hcHHHHHHHhccCCcE------EEEeCCCCCCCCCCCCcCCCcchhhHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHh
Q 016885 80 ADANEAAVILLPSNIT------LFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLY 153 (381)
Q Consensus 80 ~~~~~~~~~l~~~G~~------vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~ 153 (381)
..|..+++.|+.-||. -..+|+|- |....... -.....++..++...+..+.++|+|++|||||.+.+.+
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga~YDwRl---s~~~~e~r-d~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyF 199 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGAPYDWRL---SYHNSEER-DQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYF 199 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeeccccchhh---ccCChhHH-HHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHH
Confidence 3567788888887875 44667772 21111100 02256778888888777777999999999999999998
Q ss_pred hccCCC
Q 016885 154 GAEDPS 159 (381)
Q Consensus 154 a~~~p~ 159 (381)
....+.
T Consensus 200 l~w~~~ 205 (473)
T KOG2369|consen 200 LKWVEA 205 (473)
T ss_pred Hhcccc
Confidence 877654
No 204
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=95.92 E-value=0.13 Score=49.64 Aligned_cols=129 Identities=17% Similarity=0.132 Sum_probs=76.2
Q ss_pred EEcCCCe--EEEEEEeecCCCCCCCCCcEEEEeCCCCCChhcHHH-H----HHHhccCCcEEEEeCCCCCCCCCCC-CcC
Q 016885 42 IRNARGH--VLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANE-A----AVILLPSNITLFTLDFSGSGLSDGD-YVS 113 (381)
Q Consensus 42 ~~~~dg~--~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~-~----~~~l~~~G~~vi~~D~~G~G~S~~~-~~~ 113 (381)
+...++. .|...+|+|.. =..-++.+-|+| ....... . ...-+.+||.++.=|- ||..+... ...
T Consensus 7 ~~~~~~~~~~i~fev~LP~~-----WNgR~~~~GgGG-~~G~i~~~~~~~~~~~~~~~G~A~~~TD~-Gh~~~~~~~~~~ 79 (474)
T PF07519_consen 7 IHPSDGSAPNIRFEVWLPDN-----WNGRFLQVGGGG-FAGGINYADGKASMATALARGYATASTDS-GHQGSAGSDDAS 79 (474)
T ss_pred EecCCCCcceEEEEEECChh-----hccCeEEECCCe-eeCcccccccccccchhhhcCeEEEEecC-CCCCCccccccc
Confidence 3344444 88888999951 112344444433 2221111 1 2233456999999997 77544321 111
Q ss_pred --CCc--------chhhHHHHHHHHHHhcC---CCCcEEEEEEchhHHHHHHhhccCCC-ccEEEeccCccCHHHHHH
Q 016885 114 --LGW--------HEKDDLKVVVSYLRGNK---QTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLML 177 (381)
Q Consensus 114 --~~~--------~~~~d~~~~i~~l~~~~---~~~~i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~~~~~~~ 177 (381)
... ..+.+...+-+.+.+.+ ..++-...|.|-||..++..|.++|+ +.|++..+|..+......
T Consensus 80 ~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQryP~dfDGIlAgaPA~~~~~~~~ 157 (474)
T PF07519_consen 80 FGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQRYPEDFDGILAGAPAINWTHLQL 157 (474)
T ss_pred ccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHHhChhhcCeEEeCCchHHHHHHHH
Confidence 111 11222233333333322 23678999999999999999999998 999999999988766543
No 205
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.58 E-value=0.054 Score=43.37 Aligned_cols=58 Identities=17% Similarity=0.159 Sum_probs=44.9
Q ss_pred hHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhhccCCC-ccEEEeccCccCHHHHHH
Q 016885 120 DDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLML 177 (381)
Q Consensus 120 ~d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~~~~~~~~ 177 (381)
+.-.+.-.|+++..=.....+-|.||||+.|+.+.-++|+ +.++|..++..+..+...
T Consensus 85 ~rH~AyerYv~eEalpgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYdardffg 143 (227)
T COG4947 85 ERHRAYERYVIEEALPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYDARDFFG 143 (227)
T ss_pred HHHHHHHHHHHHhhcCCCccccccchhhhhhhhhheeChhHhhhheeecceeeHHHhcc
Confidence 3344555677665433667889999999999999999999 899999999888765443
No 206
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=95.47 E-value=0.19 Score=47.68 Aligned_cols=129 Identities=16% Similarity=0.243 Sum_probs=79.4
Q ss_pred EEEEcCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhcHHHHHHHh------------cc------CCcEEEEeCC
Q 016885 40 LEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVIL------------LP------SNITLFTLDF 101 (381)
Q Consensus 40 v~~~~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l------------~~------~G~~vi~~D~ 101 (381)
+.+....+..|.++++.... .....|+||++-|+.|++... .+...+ .. +-.+++-+|.
T Consensus 49 v~v~~~~~~~LFYwf~eS~~--~P~~dPlvLWLnGGPGCSSl~-G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfLd~ 125 (454)
T KOG1282|consen 49 VTVNESEGRQLFYWFFESEN--NPETDPLVLWLNGGPGCSSLG-GLFEENGPFRVKYNGKTLYLNPYSWNKEANILFLDQ 125 (454)
T ss_pred EECCCCCCceEEEEEEEccC--CCCCCCEEEEeCCCCCccchh-hhhhhcCCeEEcCCCCcceeCCccccccccEEEEec
Confidence 34444568999988765542 345689999999999987654 222211 11 0136777776
Q ss_pred C-CCCCCCCCCcC---CC-cchhhHHH-HHHHHHHhcCCC--CcEEEEEEchhHHHHHHhhcc----C-----C--CccE
Q 016885 102 S-GSGLSDGDYVS---LG-WHEKDDLK-VVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAE----D-----P--SIAG 162 (381)
Q Consensus 102 ~-G~G~S~~~~~~---~~-~~~~~d~~-~~i~~l~~~~~~--~~i~l~G~S~GG~~a~~~a~~----~-----p--~v~~ 162 (381)
| |.|.|-..... .+ ...+.|.. .+.+|+.+.++. .++.|.|-|++|..+-.+|.. + + +++|
T Consensus 126 PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG 205 (454)
T KOG1282|consen 126 PVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKG 205 (454)
T ss_pred CCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceE
Confidence 6 66766422211 11 11244544 445677666544 789999999999766555542 2 2 2899
Q ss_pred EEeccCccC
Q 016885 163 MVLDSAFSD 171 (381)
Q Consensus 163 vi~~~~~~~ 171 (381)
+++-+|..+
T Consensus 206 ~~IGNg~td 214 (454)
T KOG1282|consen 206 YAIGNGLTD 214 (454)
T ss_pred EEecCcccC
Confidence 999887764
No 207
>PLN02454 triacylglycerol lipase
Probab=95.46 E-value=0.047 Score=50.71 Aligned_cols=52 Identities=21% Similarity=0.199 Sum_probs=35.1
Q ss_pred hHHHHHHHHHHhcCCCC--cEEEEEEchhHHHHHHhhccC---------CCccEEEeccCccC
Q 016885 120 DDLKVVVSYLRGNKQTS--RIGLWGRSMGAVTSLLYGAED---------PSIAGMVLDSAFSD 171 (381)
Q Consensus 120 ~d~~~~i~~l~~~~~~~--~i~l~G~S~GG~~a~~~a~~~---------p~v~~vi~~~~~~~ 171 (381)
+++...++.+.+.+... +|.+.|||+||.+|+.+|... +.|..+..-+|-..
T Consensus 210 ~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~di~~~g~~~~~~~V~~~TFGsPRVG 272 (414)
T PLN02454 210 SQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFDIVENGVSGADIPVTAIVFGSPQVG 272 (414)
T ss_pred HHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHHHHHhcccccCCceEEEEeCCCccc
Confidence 45566666666665544 499999999999999887531 12556666666544
No 208
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=95.46 E-value=0.029 Score=51.53 Aligned_cols=105 Identities=20% Similarity=0.232 Sum_probs=79.1
Q ss_pred CCCCcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCC----cchhhHHHHHHHHHHhcCCCCcE
Q 016885 63 DTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLG----WHEKDDLKVVVSYLRGNKQTSRI 138 (381)
Q Consensus 63 ~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~----~~~~~d~~~~i~~l~~~~~~~~i 138 (381)
+..+|+|++.-|++-.......-...|.+ -+-+.+++|-+|.|...+.+.. |+.+.|...+++.++..+. ++.
T Consensus 60 ~~drPtV~~T~GY~~~~~p~r~Ept~Lld--~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY~-~kW 136 (448)
T PF05576_consen 60 DFDRPTVLYTEGYNVSTSPRRSEPTQLLD--GNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIYP-GKW 136 (448)
T ss_pred CCCCCeEEEecCcccccCccccchhHhhc--cceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhcc-CCc
Confidence 45789999999998654322222223443 3578999999999987765543 3447889999999987653 689
Q ss_pred EEEEEchhHHHHHHhhccCCC-ccEEEeccCcc
Q 016885 139 GLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFS 170 (381)
Q Consensus 139 ~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~~~ 170 (381)
+--|-|-||++++.+=.-+|+ |.+.|...++.
T Consensus 137 ISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP~ 169 (448)
T PF05576_consen 137 ISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAPN 169 (448)
T ss_pred eecCcCCCceeEEEEeeeCCCCCCeeeeeeccc
Confidence 999999999999999888998 99988765554
No 209
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=95.42 E-value=0.022 Score=47.73 Aligned_cols=71 Identities=18% Similarity=0.129 Sum_probs=45.6
Q ss_pred HHHhccCCcEEEEeCCCCCCCCC------CCCcCCCcchhhHHHHHHHHHHhcCCC-CcEEEEEEchhHHHHHHhhccC
Q 016885 86 AVILLPSNITLFTLDFSGSGLSD------GDYVSLGWHEKDDLKVVVSYLRGNKQT-SRIGLWGRSMGAVTSLLYGAED 157 (381)
Q Consensus 86 ~~~l~~~G~~vi~~D~~G~G~S~------~~~~~~~~~~~~d~~~~i~~l~~~~~~-~~i~l~G~S~GG~~a~~~a~~~ 157 (381)
+..|... .+|++|-||-..... ............|+.++.++..++.+. .+++|+|||.|+.+...++.+.
T Consensus 39 as~F~~~-~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 39 ASAFNGV-CNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hhhhhcC-CccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 3344443 588998888432111 110000001157899998877776644 7999999999999999988764
No 210
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=95.09 E-value=0.045 Score=47.00 Aligned_cols=34 Identities=18% Similarity=0.052 Sum_probs=26.1
Q ss_pred CcEEEEEEchhHHHHHHhhccCC-----CccEEEeccCc
Q 016885 136 SRIGLWGRSMGAVTSLLYGAEDP-----SIAGMVLDSAF 169 (381)
Q Consensus 136 ~~i~l~G~S~GG~~a~~~a~~~p-----~v~~vi~~~~~ 169 (381)
++|.+.|||.||.+|..++...+ +|..+....++
T Consensus 84 ~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgP 122 (224)
T PF11187_consen 84 GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGP 122 (224)
T ss_pred CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCC
Confidence 46999999999999999888733 36677655443
No 211
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=94.09 E-value=0.038 Score=43.66 Aligned_cols=78 Identities=21% Similarity=0.149 Sum_probs=48.5
Q ss_pred CCcEEEEeCCCCCChhcHHHHHHHhccCCc-EEEEeCCCCCCCCCCCCcCCCcchhhHHHHHHHHHHhcCCCCcEEEEEE
Q 016885 65 PLPCVVYCHGNSGCRADANEAAVILLPSNI-TLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGR 143 (381)
Q Consensus 65 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~-~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~i~l~G~ 143 (381)
+..+||+.-|+|........+. + ..++ .++++|++..... -|+. ..+.|-++.+
T Consensus 10 gd~LIvyFaGwgtpps~v~HLi--l-peN~dl~lcYDY~dl~ld------------fDfs----------Ay~hirlvAw 64 (214)
T COG2830 10 GDHLIVYFAGWGTPPSAVNHLI--L-PENHDLLLCYDYQDLNLD------------FDFS----------AYRHIRLVAW 64 (214)
T ss_pred CCEEEEEEecCCCCHHHHhhcc--C-CCCCcEEEEeehhhcCcc------------cchh----------hhhhhhhhhh
Confidence 3349999999998776555443 2 3344 5678898743211 1111 1245678999
Q ss_pred chhHHHHHHhhccCCCccEEEeccC
Q 016885 144 SMGAVTSLLYGAEDPSIAGMVLDSA 168 (381)
Q Consensus 144 S~GG~~a~~~a~~~p~v~~vi~~~~ 168 (381)
|||-.+|-++....+ ++..+.+++
T Consensus 65 SMGVwvAeR~lqg~~-lksatAiNG 88 (214)
T COG2830 65 SMGVWVAERVLQGIR-LKSATAING 88 (214)
T ss_pred hHHHHHHHHHHhhcc-ccceeeecC
Confidence 999999998876655 444444443
No 212
>PLN00413 triacylglycerol lipase
Probab=94.01 E-value=0.07 Score=50.23 Aligned_cols=35 Identities=23% Similarity=0.324 Sum_probs=27.0
Q ss_pred HHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhhc
Q 016885 121 DLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGA 155 (381)
Q Consensus 121 d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~ 155 (381)
.+...++.+.+..+..++.+.|||+||.+|..+|.
T Consensus 269 ~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 269 TILRHLKEIFDQNPTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHH
Confidence 44555555555556678999999999999998874
No 213
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=93.99 E-value=0.1 Score=48.90 Aligned_cols=116 Identities=17% Similarity=0.240 Sum_probs=68.0
Q ss_pred EEEEEeecCCCCCCCCCcEEEEeCCCC---CChhcHHHHHHHhccC-CcEEEEeCCCC----C---CCCCCCCcCCCcch
Q 016885 50 LQCSHYMPSPFPEDTPLPCVVYCHGNS---GCRADANEAAVILLPS-NITLFTLDFSG----S---GLSDGDYVSLGWHE 118 (381)
Q Consensus 50 l~~~~~~P~~~~~~~~~p~vv~~HG~~---~~~~~~~~~~~~l~~~-G~~vi~~D~~G----~---G~S~~~~~~~~~~~ 118 (381)
|...+|.|.. .....-++|++-|+| |+...-..-.+.|+.. .-.|+.+++|= + +..+..+...+
T Consensus 121 LYlNVW~P~~--~p~n~tVlVWiyGGGF~sGt~SLdvYdGk~la~~envIvVs~NYRvG~FGFL~l~~~~eaPGNmG--- 195 (601)
T KOG4389|consen 121 LYLNVWAPAA--DPYNLTVLVWIYGGGFYSGTPSLDVYDGKFLAAVENVIVVSMNYRVGAFGFLYLPGHPEAPGNMG--- 195 (601)
T ss_pred eEEEEeccCC--CCCCceEEEEEEcCccccCCcceeeeccceeeeeccEEEEEeeeeeccceEEecCCCCCCCCccc---
Confidence 4556888852 233445888898887 3322212224556554 45566777762 1 23333344444
Q ss_pred hhHHHHHHHHHHhcCC-----CCcEEEEEEchhHHHHH-HhhccCCC--ccEEEeccCcc
Q 016885 119 KDDLKVVVSYLRGNKQ-----TSRIGLWGRSMGAVTSL-LYGAEDPS--IAGMVLDSAFS 170 (381)
Q Consensus 119 ~~d~~~~i~~l~~~~~-----~~~i~l~G~S~GG~~a~-~~a~~~p~--v~~vi~~~~~~ 170 (381)
.-|-.-++.|++++.. .++|.|+|-|.|+.-+. ++.+-..+ ++..|+-++..
T Consensus 196 l~DQqLAl~WV~~Ni~aFGGnp~~vTLFGESAGaASv~aHLlsP~S~glF~raIlQSGS~ 255 (601)
T KOG4389|consen 196 LLDQQLALQWVQENIAAFGGNPSRVTLFGESAGAASVVAHLLSPGSRGLFHRAILQSGSL 255 (601)
T ss_pred hHHHHHHHHHHHHhHHHhCCCcceEEEeccccchhhhhheecCCCchhhHHHHHhhcCCC
Confidence 3566778889988742 28999999999987543 33332222 66777655543
No 214
>PLN02162 triacylglycerol lipase
Probab=93.86 E-value=0.081 Score=49.71 Aligned_cols=35 Identities=17% Similarity=0.264 Sum_probs=25.6
Q ss_pred HHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhhc
Q 016885 121 DLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGA 155 (381)
Q Consensus 121 d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~ 155 (381)
.+.+.++.+..+.+..++.+.|||+||.+|..+|.
T Consensus 263 ~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 263 TIRQMLRDKLARNKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHH
Confidence 44455554444445578999999999999988754
No 215
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=93.73 E-value=0.14 Score=42.43 Aligned_cols=77 Identities=18% Similarity=0.097 Sum_probs=44.2
Q ss_pred CcEEEEeCCCCCCCCCCCCcCCCcchhhHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhhcc--CC-----CccEEEe
Q 016885 93 NITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAE--DP-----SIAGMVL 165 (381)
Q Consensus 93 G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~--~p-----~v~~vi~ 165 (381)
...+..++||-..... .+......-+.++...++.....-+..+|+|+|+|+|+.++..++.. .+ +|.++++
T Consensus 39 ~~~~~~V~YpA~~~~~-~y~~S~~~G~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvl 117 (179)
T PF01083_consen 39 SVAVQGVEYPASLGPN-SYGDSVAAGVANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVL 117 (179)
T ss_dssp EEEEEE--S---SCGG-SCHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEE
T ss_pred eeEEEecCCCCCCCcc-cccccHHHHHHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEE
Confidence 4566667787432211 00000001145666666666566566899999999999999998877 22 1888888
Q ss_pred ccCcc
Q 016885 166 DSAFS 170 (381)
Q Consensus 166 ~~~~~ 170 (381)
++-+.
T Consensus 118 fGdP~ 122 (179)
T PF01083_consen 118 FGDPR 122 (179)
T ss_dssp ES-TT
T ss_pred ecCCc
Confidence 76543
No 216
>PLN02934 triacylglycerol lipase
Probab=93.64 E-value=0.081 Score=50.23 Aligned_cols=35 Identities=14% Similarity=0.340 Sum_probs=28.0
Q ss_pred HHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhhc
Q 016885 121 DLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGA 155 (381)
Q Consensus 121 d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~ 155 (381)
.+...++.+.+..+..++.+.|||+||.+|..++.
T Consensus 306 ~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 306 AVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 45666666666666689999999999999998874
No 217
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=93.62 E-value=0.22 Score=40.89 Aligned_cols=50 Identities=18% Similarity=0.238 Sum_probs=36.8
Q ss_pred hhHHHHHHHHHHhcC-CCCcEEEEEEchhHHHHHHhhccCC-CccEEEeccC
Q 016885 119 KDDLKVVVSYLRGNK-QTSRIGLWGRSMGAVTSLLYGAEDP-SIAGMVLDSA 168 (381)
Q Consensus 119 ~~d~~~~i~~l~~~~-~~~~i~l~G~S~GG~~a~~~a~~~p-~v~~vi~~~~ 168 (381)
..++...++-|+... +..++.++|||+|+.++-.++...+ .+..++++..
T Consensus 91 a~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GS 142 (177)
T PF06259_consen 91 APRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGS 142 (177)
T ss_pred HHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECC
Confidence 456666666666655 4479999999999999998887733 3777777654
No 218
>PLN02571 triacylglycerol lipase
Probab=93.30 E-value=0.11 Score=48.49 Aligned_cols=37 Identities=24% Similarity=0.299 Sum_probs=25.5
Q ss_pred hHHHHHHHHHHhcCCC--CcEEEEEEchhHHHHHHhhcc
Q 016885 120 DDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAE 156 (381)
Q Consensus 120 ~d~~~~i~~l~~~~~~--~~i~l~G~S~GG~~a~~~a~~ 156 (381)
+++.+.+..+.+.... -+|.+.|||+||.+|...|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 3444445555444433 369999999999999987764
No 219
>PLN02310 triacylglycerol lipase
Probab=93.15 E-value=0.1 Score=48.40 Aligned_cols=21 Identities=29% Similarity=0.422 Sum_probs=18.4
Q ss_pred CcEEEEEEchhHHHHHHhhcc
Q 016885 136 SRIGLWGRSMGAVTSLLYGAE 156 (381)
Q Consensus 136 ~~i~l~G~S~GG~~a~~~a~~ 156 (381)
.+|.+.|||+||.+|+.+|..
T Consensus 209 ~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 209 VSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred ceEEEEcccHHHHHHHHHHHH
Confidence 589999999999999987743
No 220
>PLN02408 phospholipase A1
Probab=93.15 E-value=0.12 Score=47.41 Aligned_cols=36 Identities=17% Similarity=0.190 Sum_probs=25.3
Q ss_pred HHHHHHHHHHhcCCC--CcEEEEEEchhHHHHHHhhcc
Q 016885 121 DLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAE 156 (381)
Q Consensus 121 d~~~~i~~l~~~~~~--~~i~l~G~S~GG~~a~~~a~~ 156 (381)
.+.+.+..+.+..+. .+|.+.|||+||.+|..+|..
T Consensus 183 qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 183 MVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 344445555554443 369999999999999987764
No 221
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=92.99 E-value=0.37 Score=45.68 Aligned_cols=94 Identities=19% Similarity=0.232 Sum_probs=60.1
Q ss_pred CCCCCcEEEEeCCCCCChhcHHHHHHH-------------------hccCCcEEEEeC-CCCCCCCCC--CCcCCC-cch
Q 016885 62 EDTPLPCVVYCHGNSGCRADANEAAVI-------------------LLPSNITLFTLD-FSGSGLSDG--DYVSLG-WHE 118 (381)
Q Consensus 62 ~~~~~p~vv~~HG~~~~~~~~~~~~~~-------------------l~~~G~~vi~~D-~~G~G~S~~--~~~~~~-~~~ 118 (381)
...++|+++++.|+.|++..+..+.+. +.+ .-.++-+| .-|.|.|.. +..... +..
T Consensus 97 dp~~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~-~adLvFiDqPvGTGfS~a~~~e~~~d~~~~ 175 (498)
T COG2939 97 DPANRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLD-FADLVFIDQPVGTGFSRALGDEKKKDFEGA 175 (498)
T ss_pred CCCCCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCcccccc-CCceEEEecCcccCcccccccccccchhcc
Confidence 345789999999999998876544221 111 13577888 568888863 221111 112
Q ss_pred hhHHHHHHHHHHhcC----CC-CcEEEEEEchhHHHHHHhhcc
Q 016885 119 KDDLKVVVSYLRGNK----QT-SRIGLWGRSMGAVTSLLYGAE 156 (381)
Q Consensus 119 ~~d~~~~i~~l~~~~----~~-~~i~l~G~S~GG~~a~~~a~~ 156 (381)
-.|+..+.+.+.+.. .. .+.+|+|-|+||.-+..+|..
T Consensus 176 ~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~ 218 (498)
T COG2939 176 GKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHE 218 (498)
T ss_pred chhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHH
Confidence 356666655554433 22 689999999999988777754
No 222
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=92.97 E-value=0.2 Score=46.08 Aligned_cols=90 Identities=18% Similarity=0.105 Sum_probs=48.7
Q ss_pred CCCCcEEEEeCCCCC-ChhcHHHHHHHhccC--CcEEEEeCCCCCCCCCCC-CcCCCcchhhHHHHHHHHHHhcCCCCcE
Q 016885 63 DTPLPCVVYCHGNSG-CRADANEAAVILLPS--NITLFTLDFSGSGLSDGD-YVSLGWHEKDDLKVVVSYLRGNKQTSRI 138 (381)
Q Consensus 63 ~~~~p~vv~~HG~~~-~~~~~~~~~~~l~~~--G~~vi~~D~~G~G~S~~~-~~~~~~~~~~d~~~~i~~l~~~~~~~~i 138 (381)
.++.-+||+.||.-+ +...|...+...... +..++...+.+.-....+ -...++...++ +++.+... .+++|
T Consensus 77 ~k~~HLvVlthGi~~~~~~~~~~~~~~~~kk~p~~~iv~~g~~~~~~~T~~Gv~~lG~Rla~~---~~e~~~~~-si~kI 152 (405)
T KOG4372|consen 77 TKPKHLVVLTHGLHGADMEYWKEKIEQMTKKMPDKLIVVRGKMNNMCQTFDGVDVLGERLAEE---VKETLYDY-SIEKI 152 (405)
T ss_pred cCCceEEEeccccccccHHHHHHHHHhhhcCCCcceEeeeccccchhhccccceeeecccHHH---Hhhhhhcc-cccee
Confidence 355679999999988 455555555555443 343333333322111111 11123222222 23222221 25899
Q ss_pred EEEEEchhHHHHHHhhcc
Q 016885 139 GLWGRSMGAVTSLLYGAE 156 (381)
Q Consensus 139 ~l~G~S~GG~~a~~~a~~ 156 (381)
-++|||+||.++-.+.+.
T Consensus 153 SfvghSLGGLvar~AIgy 170 (405)
T KOG4372|consen 153 SFVGHSLGGLVARYAIGY 170 (405)
T ss_pred eeeeeecCCeeeeEEEEe
Confidence 999999999988765544
No 223
>PLN03037 lipase class 3 family protein; Provisional
Probab=92.76 E-value=0.12 Score=49.27 Aligned_cols=21 Identities=29% Similarity=0.438 Sum_probs=18.3
Q ss_pred CcEEEEEEchhHHHHHHhhcc
Q 016885 136 SRIGLWGRSMGAVTSLLYGAE 156 (381)
Q Consensus 136 ~~i~l~G~S~GG~~a~~~a~~ 156 (381)
.+|.|.|||+||.+|+..|..
T Consensus 318 ~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 318 VSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred ceEEEeccCHHHHHHHHHHHH
Confidence 579999999999999987743
No 224
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=92.56 E-value=6.9 Score=35.89 Aligned_cols=223 Identities=13% Similarity=0.069 Sum_probs=108.1
Q ss_pred CCC-cEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchhhHHHHHHHHHHhcCC--CCcEEE
Q 016885 64 TPL-PCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQ--TSRIGL 140 (381)
Q Consensus 64 ~~~-p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~i~~l~~~~~--~~~i~l 140 (381)
... |+|+++.+.|..............+.||.++.+-.|-+-..-.... ..-....+...+..+.+... ..++.+
T Consensus 36 ~s~k~Iv~~~gWag~~~r~l~ky~~~Yq~~g~~~~~~tap~~~~~~~~s~--~~~sl~~~~~~l~~L~~~~~~~~~pi~f 113 (350)
T KOG2521|consen 36 ESEKPIVVLLGWAGAIDRNLMKYSKIYQDKGYIVVRITAPCPSVFLSASR--RILSLSLASTRLSELLSDYNSDPCPIIF 113 (350)
T ss_pred CccccEEEEeeeccccchhHHHHHHHHhcCCceEEEecCccccccccccc--ccchhhHHHHHHHHHhhhccCCcCceEE
Confidence 344 5555555444443444556677778899999988886532211111 11112333344444444433 367888
Q ss_pred EEEchhHHHHHHhh---c-cC-CC----ccEEEeccCccCHHHHH-----------HHHHHHhh---hhCCcc--cHHH-
Q 016885 141 WGRSMGAVTSLLYG---A-ED-PS----IAGMVLDSAFSDLFDLM-----------LELVDVYK---IRLPKF--TVKM- 194 (381)
Q Consensus 141 ~G~S~GG~~a~~~a---~-~~-p~----v~~vi~~~~~~~~~~~~-----------~~~~~~~~---~~~~~~--~~~~- 194 (381)
--+|+||...+... . +. |. ..+++..+......... ......+. .....+ ....
T Consensus 114 h~FS~ng~~~~~si~~~~~~~~~~~~~~~~~~~fdS~p~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 193 (350)
T KOG2521|consen 114 HVFSGNGVRLMYSISLQLIKHEPKAAQLSGGIIFDSAPARSSPVQLGWAVSFSSPPDDYVARWARLNYHITLLTMAGNEG 193 (350)
T ss_pred EEecCCceeehHHHHHHHhhcCchhHhhcCCceEeccccccchhhhcceeccccCchhhHHHHHhcCeEEEEEEeeeccc
Confidence 89999998765433 1 12 32 45566655443211100 00000000 000000 0000
Q ss_pred HHHHHHHHh-hhhhhccccccc-hhhcCCCCCCcEEEEeeCCCCccChHHHHHHHHHcC---CCceEEEe-CCC---CCC
Q 016885 195 AVQYMRRVI-QKKAKFDIMDLN-CLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA---GDKNIIKF-DGD---HNS 265 (381)
Q Consensus 195 ~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~i~~Pvlii~G~~D~~v~~~~~~~l~~~~~---~~~~~~~~-~gg---H~~ 265 (381)
....+.... .........-.+ ..........+.+.+.+..|.++|....+++.+... .....+-+ ++- |.-
T Consensus 194 ~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r 273 (350)
T KOG2521|consen 194 GAYLLGPLAEKISMSRKYHFLDRYEEQRNELPWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFR 273 (350)
T ss_pred chhhhhhhhhccccccchHHHHHHHhhhhcccccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeec
Confidence 000000000 000000000000 001111224677888899999999999888866552 22222223 334 555
Q ss_pred CChhhHHHHHHHHHHhhcCCCCC
Q 016885 266 SRPQFYYDSVSIFFYNVLHPPQI 288 (381)
Q Consensus 266 ~~~~~~~~~i~~fl~~~l~~~~~ 288 (381)
.+|..+.+...+|++........
T Consensus 274 ~~p~~y~~~~~~Fl~~~~~~~~~ 296 (350)
T KOG2521|consen 274 SFPKTYLKKCSEFLRSVISSYNL 296 (350)
T ss_pred cCcHHHHHHHHHHHHhcccccCC
Confidence 68999999999999988765443
No 225
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=92.05 E-value=5.5 Score=42.17 Aligned_cols=96 Identities=19% Similarity=0.221 Sum_probs=60.3
Q ss_pred CCCCcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchhhHHHH-HHHHHHhcCCCCcEEEE
Q 016885 63 DTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKV-VVSYLRGNKQTSRIGLW 141 (381)
Q Consensus 63 ~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~-~i~~l~~~~~~~~i~l~ 141 (381)
....|.+.|+|..-|....+..++..| ..|.+|.-.-...+. ..++++.+ .++.+++..+..+..++
T Consensus 2120 ~se~~~~Ffv~pIEG~tt~l~~la~rl----------e~PaYglQ~T~~vP~--dSies~A~~yirqirkvQP~GPYrl~ 2187 (2376)
T KOG1202|consen 2120 QSEEPPLFFVHPIEGFTTALESLASRL----------EIPAYGLQCTEAVPL--DSIESLAAYYIRQIRKVQPEGPYRLA 2187 (2376)
T ss_pred cccCCceEEEeccccchHHHHHHHhhc----------CCcchhhhccccCCc--chHHHHHHHHHHHHHhcCCCCCeeee
Confidence 456799999999988766666555544 234444332222221 12344332 34556555556899999
Q ss_pred EEchhHHHHHHhhccCCC---ccEEEeccCcc
Q 016885 142 GRSMGAVTSLLYGAEDPS---IAGMVLDSAFS 170 (381)
Q Consensus 142 G~S~GG~~a~~~a~~~p~---v~~vi~~~~~~ 170 (381)
|+|+|+.++..+|....+ ...+|+..+..
T Consensus 2188 GYSyG~~l~f~ma~~Lqe~~~~~~lillDGsp 2219 (2376)
T KOG1202|consen 2188 GYSYGACLAFEMASQLQEQQSPAPLILLDGSP 2219 (2376)
T ss_pred ccchhHHHHHHHHHHHHhhcCCCcEEEecCch
Confidence 999999999888765432 56678766554
No 226
>PLN02324 triacylglycerol lipase
Probab=92.05 E-value=0.19 Score=46.77 Aligned_cols=36 Identities=28% Similarity=0.299 Sum_probs=25.9
Q ss_pred hHHHHHHHHHHhcCCC--CcEEEEEEchhHHHHHHhhc
Q 016885 120 DDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGA 155 (381)
Q Consensus 120 ~d~~~~i~~l~~~~~~--~~i~l~G~S~GG~~a~~~a~ 155 (381)
+.+.+.+..+.+.+.. -+|.+.|||+||.+|+..|.
T Consensus 197 eqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~ 234 (415)
T PLN02324 197 EQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAA 234 (415)
T ss_pred HHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHH
Confidence 3445555555555443 47999999999999998875
No 227
>PLN02802 triacylglycerol lipase
Probab=91.62 E-value=0.23 Score=47.26 Aligned_cols=36 Identities=28% Similarity=0.262 Sum_probs=25.2
Q ss_pred HHHHHHHHHHhcCCC--CcEEEEEEchhHHHHHHhhcc
Q 016885 121 DLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAE 156 (381)
Q Consensus 121 d~~~~i~~l~~~~~~--~~i~l~G~S~GG~~a~~~a~~ 156 (381)
++.+.+..+.+.+.. .+|.+.|||+||.+|..+|..
T Consensus 313 qVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 313 SVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 444445555554433 479999999999999987764
No 228
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=91.50 E-value=0.42 Score=41.69 Aligned_cols=49 Identities=20% Similarity=0.201 Sum_probs=36.3
Q ss_pred hHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhhccCCCccEEEeccCc
Q 016885 120 DDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAF 169 (381)
Q Consensus 120 ~d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~v~~vi~~~~~ 169 (381)
.+..+++..+++.++..+|.+.|||+||.+|..+..+.. +-.+..-+|.
T Consensus 260 Sa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg-lP~VaFesPG 308 (425)
T KOG4540|consen 260 SAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG-LPVVAFESPG 308 (425)
T ss_pred HHHHHHHHHHHHhCCCceEEEeccccchHHHHHhccccC-CceEEecCch
Confidence 345566667777777899999999999999998876654 4555555554
No 229
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=91.50 E-value=0.42 Score=41.69 Aligned_cols=49 Identities=20% Similarity=0.201 Sum_probs=36.3
Q ss_pred hHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhhccCCCccEEEeccCc
Q 016885 120 DDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAF 169 (381)
Q Consensus 120 ~d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~v~~vi~~~~~ 169 (381)
.+..+++..+++.++..+|.+.|||+||.+|..+..+.. +-.+..-+|.
T Consensus 260 Sa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg-lP~VaFesPG 308 (425)
T COG5153 260 SAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG-LPVVAFESPG 308 (425)
T ss_pred HHHHHHHHHHHHhCCCceEEEeccccchHHHHHhccccC-CceEEecCch
Confidence 345566667777777899999999999999998876654 4555555554
No 230
>PLN02719 triacylglycerol lipase
Probab=91.20 E-value=0.26 Score=46.94 Aligned_cols=36 Identities=19% Similarity=0.204 Sum_probs=25.4
Q ss_pred hHHHHHHHHHHhcCCC-----CcEEEEEEchhHHHHHHhhc
Q 016885 120 DDLKVVVSYLRGNKQT-----SRIGLWGRSMGAVTSLLYGA 155 (381)
Q Consensus 120 ~d~~~~i~~l~~~~~~-----~~i~l~G~S~GG~~a~~~a~ 155 (381)
+++.+.+..+.+.+.. .+|.+.|||+||.+|..+|.
T Consensus 277 eQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~ 317 (518)
T PLN02719 277 EQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAY 317 (518)
T ss_pred HHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHH
Confidence 3455555555554332 48999999999999998774
No 231
>PLN02761 lipase class 3 family protein
Probab=91.18 E-value=0.26 Score=47.03 Aligned_cols=36 Identities=22% Similarity=0.219 Sum_probs=25.6
Q ss_pred hHHHHHHHHHHhcC------CCCcEEEEEEchhHHHHHHhhc
Q 016885 120 DDLKVVVSYLRGNK------QTSRIGLWGRSMGAVTSLLYGA 155 (381)
Q Consensus 120 ~d~~~~i~~l~~~~------~~~~i~l~G~S~GG~~a~~~a~ 155 (381)
+++.+.+..+.+.+ ..-+|.+.|||+||.+|...|.
T Consensus 272 ~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 272 EQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 44555555555544 1257999999999999998774
No 232
>PLN02753 triacylglycerol lipase
Probab=91.15 E-value=0.27 Score=47.05 Aligned_cols=36 Identities=19% Similarity=0.253 Sum_probs=25.8
Q ss_pred hHHHHHHHHHHhcCC-----CCcEEEEEEchhHHHHHHhhc
Q 016885 120 DDLKVVVSYLRGNKQ-----TSRIGLWGRSMGAVTSLLYGA 155 (381)
Q Consensus 120 ~d~~~~i~~l~~~~~-----~~~i~l~G~S~GG~~a~~~a~ 155 (381)
+.+.+.+..+.+.+. .-+|.+.|||+||.+|..+|.
T Consensus 291 eQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 291 EQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred HHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHH
Confidence 445555555555432 358999999999999998874
No 233
>PLN02847 triacylglycerol lipase
Probab=90.93 E-value=0.31 Score=47.25 Aligned_cols=31 Identities=19% Similarity=0.134 Sum_probs=22.6
Q ss_pred HHHHHhcCCCCcEEEEEEchhHHHHHHhhcc
Q 016885 126 VSYLRGNKQTSRIGLWGRSMGAVTSLLYGAE 156 (381)
Q Consensus 126 i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~ 156 (381)
+..+....+.-++.++|||+||.+|..++..
T Consensus 241 L~kal~~~PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 241 LLKALDEYPDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred HHHHHHHCCCCeEEEeccChHHHHHHHHHHH
Confidence 3333344455689999999999999887654
No 234
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=90.13 E-value=1.2 Score=40.68 Aligned_cols=78 Identities=18% Similarity=0.199 Sum_probs=49.3
Q ss_pred EEEEeCCC-CCCCCCCCCcCCCc---chhhHHHHHHHHHHhcC-C--CCcEEEEEEchhHHHHHHhhcc----C-----C
Q 016885 95 TLFTLDFS-GSGLSDGDYVSLGW---HEKDDLKVVVSYLRGNK-Q--TSRIGLWGRSMGAVTSLLYGAE----D-----P 158 (381)
Q Consensus 95 ~vi~~D~~-G~G~S~~~~~~~~~---~~~~d~~~~i~~l~~~~-~--~~~i~l~G~S~GG~~a~~~a~~----~-----p 158 (381)
+++-+|.| |.|.|-........ ..++|+..++..+-+.. . ..++.|.|-|+||..+-.+|.. + +
T Consensus 3 NvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~~ 82 (319)
T PLN02213 3 NIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEP 82 (319)
T ss_pred cEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccCC
Confidence 68889988 88888643221111 12455555554333333 2 2789999999999876655542 2 2
Q ss_pred --CccEEEeccCccCH
Q 016885 159 --SIAGMVLDSAFSDL 172 (381)
Q Consensus 159 --~v~~vi~~~~~~~~ 172 (381)
+++|+++-+|+.+.
T Consensus 83 ~inLkGi~IGNg~t~~ 98 (319)
T PLN02213 83 PINLQGYMLGNPVTYM 98 (319)
T ss_pred ceeeeEEEeCCCCCCc
Confidence 28899998886643
No 235
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=89.71 E-value=2.3 Score=37.96 Aligned_cols=90 Identities=19% Similarity=0.241 Sum_probs=53.0
Q ss_pred cEEEEeCCCCCChhc------HHHHHHHh-ccCCcEEEEeCCCCCCCC--------CCC-----CcCCCcchhhHHHHHH
Q 016885 67 PCVVYCHGNSGCRAD------ANEAAVIL-LPSNITLFTLDFSGSGLS--------DGD-----YVSLGWHEKDDLKVVV 126 (381)
Q Consensus 67 p~vv~~HG~~~~~~~------~~~~~~~l-~~~G~~vi~~D~~G~G~S--------~~~-----~~~~~~~~~~d~~~~i 126 (381)
.+|||+=|.+.+... ...+.+.+ ...+-..+++=.+|-|.. ... ....++.....+..+.
T Consensus 2 ~iv~~fDGT~n~~~~~~~~TNV~rL~~~~~~~~~~~q~~~Y~~GvGt~~~~~~~~~~~~~~~~~~~a~g~g~~~~I~~ay 81 (277)
T PF09994_consen 2 RIVVFFDGTGNNPDNDPPPTNVARLYDAYKDRDGERQIVYYIPGVGTEFGSEFGESGRALDRLLGGAFGWGIEARIRDAY 81 (277)
T ss_pred cEEEEecCCCCCCCCCccccHHHHHHHHhhccCCCceeEEEecccccccccccccccchhhhccCchhhcchHHHHHHHH
Confidence 467777777643321 23455555 222323444455666651 110 0111222246777788
Q ss_pred HHHHhcCCC-CcEEEEEEchhHHHHHHhhcc
Q 016885 127 SYLRGNKQT-SRIGLWGRSMGAVTSLLYGAE 156 (381)
Q Consensus 127 ~~l~~~~~~-~~i~l~G~S~GG~~a~~~a~~ 156 (381)
.++.+.... ++|.++|+|-|+++|-.++..
T Consensus 82 ~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 82 RFLSKNYEPGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred HHHHhccCCcceEEEEecCccHHHHHHHHHH
Confidence 888666543 889999999999999888754
No 236
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=89.52 E-value=0.42 Score=43.92 Aligned_cols=37 Identities=19% Similarity=0.148 Sum_probs=30.8
Q ss_pred hHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhhcc
Q 016885 120 DDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAE 156 (381)
Q Consensus 120 ~d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~ 156 (381)
..+.+.++.+.+..+.-+|.+.|||+||.+|..+|..
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHH
Confidence 5667777777777777899999999999999887764
No 237
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=88.07 E-value=1.2 Score=33.60 Aligned_cols=37 Identities=14% Similarity=0.095 Sum_probs=22.2
Q ss_pred CCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhcHHHH
Q 016885 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEA 85 (381)
Q Consensus 45 ~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~ 85 (381)
.+|..|+..+..++ +.....||++||+.|+--.+..+
T Consensus 75 I~g~~iHFih~rs~----~~~aiPLll~HGWPgSf~Ef~~v 111 (112)
T PF06441_consen 75 IDGLDIHFIHVRSK----RPNAIPLLLLHGWPGSFLEFLKV 111 (112)
T ss_dssp ETTEEEEEEEE--S-----TT-EEEEEE--SS--GGGGHHH
T ss_pred EeeEEEEEEEeeCC----CCCCeEEEEECCCCccHHhHHhh
Confidence 46999998776553 45677999999999988766543
No 238
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=87.59 E-value=3.7 Score=36.77 Aligned_cols=94 Identities=17% Similarity=0.113 Sum_probs=62.8
Q ss_pred CCCCcEEEEeCCCCCC---h--hcHHHHHHHhcc-CCcEEEEeCCCCCCCCCCCC--------------cCCCcchhhHH
Q 016885 63 DTPLPCVVYCHGNSGC---R--ADANEAAVILLP-SNITLFTLDFSGSGLSDGDY--------------VSLGWHEKDDL 122 (381)
Q Consensus 63 ~~~~p~vv~~HG~~~~---~--~~~~~~~~~l~~-~G~~vi~~D~~G~G~S~~~~--------------~~~~~~~~~d~ 122 (381)
+..+.+|+++-|.... . .....+...|.. .+-.++++=-+|-|.-.-+. ..+++.-...+
T Consensus 28 ds~k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI 107 (423)
T COG3673 28 DSMKRLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNI 107 (423)
T ss_pred cCcceEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHH
Confidence 4556788888876521 1 223344555554 47788888778877542110 11233336778
Q ss_pred HHHHHHHHhcCCC-CcEEEEEEchhHHHHHHhhcc
Q 016885 123 KVVVSYLRGNKQT-SRIGLWGRSMGAVTSLLYGAE 156 (381)
Q Consensus 123 ~~~i~~l~~~~~~-~~i~l~G~S~GG~~a~~~a~~ 156 (381)
..+..+|...+.. ++|.++|+|-|++.|-.+|+.
T Consensus 108 ~~AYrFL~~~yepGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 108 REAYRFLIFNYEPGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHHHHHhcCCCCeEEEeeccchhHHHHHHHHH
Confidence 8899999888765 899999999999999777754
No 239
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=85.41 E-value=1.7 Score=42.04 Aligned_cols=62 Identities=13% Similarity=0.046 Sum_probs=47.1
Q ss_pred CCCcEEEEeeCCCCccChHHHHHHHHHc----CC-------CceEEEeCC-CCCCC----ChhhHHHHHHHHHHhhcC
Q 016885 223 TFIPALFGHASEDKFIRARHSDLIFNAY----AG-------DKNIIKFDG-DHNSS----RPQFYYDSVSIFFYNVLH 284 (381)
Q Consensus 223 i~~Pvlii~G~~D~~v~~~~~~~l~~~~----~~-------~~~~~~~~g-gH~~~----~~~~~~~~i~~fl~~~l~ 284 (381)
---.+++.||..|.+|++..+.+.++++ +. -.++..+|| +|+.. .+-.....+.+|+++-..
T Consensus 352 ~GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~G~A 429 (474)
T PF07519_consen 352 RGGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVENGKA 429 (474)
T ss_pred cCCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhCCCC
Confidence 3467999999999999999888888776 22 135666788 99944 455788889999986433
No 240
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=85.32 E-value=3.4 Score=35.55 Aligned_cols=63 Identities=17% Similarity=0.196 Sum_probs=34.0
Q ss_pred CcEEEEeCCCCC-CCCCCCCcCCCcch--hhHHHHHHHHHHhcC-CCCcEEEEEEchhHHHHHHhhcc
Q 016885 93 NITLFTLDFSGS-GLSDGDYVSLGWHE--KDDLKVVVSYLRGNK-QTSRIGLWGRSMGAVTSLLYGAE 156 (381)
Q Consensus 93 G~~vi~~D~~G~-G~S~~~~~~~~~~~--~~d~~~~i~~l~~~~-~~~~i~l~G~S~GG~~a~~~a~~ 156 (381)
|+.+..+++|.. +--.+ .....+.+ .+-...+.+.+.+.. ..+++.++|+|+|+.++...+.+
T Consensus 2 ~~~~~~V~YPa~f~P~~g-~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~ 68 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTG-IGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRR 68 (225)
T ss_pred CcceEEecCCchhcCcCC-CCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHH
Confidence 577788888862 11111 01111111 222233333333322 34889999999999999776654
No 241
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=85.01 E-value=1.5 Score=36.37 Aligned_cols=58 Identities=12% Similarity=0.055 Sum_probs=42.5
Q ss_pred CCcEEEEeeCCCCccChHHHHHHHHHc---CC-CceEEEeCC-CCCCC-----ChhhHHHHHHHHHHh
Q 016885 224 FIPALFGHASEDKFIRARHSDLIFNAY---AG-DKNIIKFDG-DHNSS-----RPQFYYDSVSIFFYN 281 (381)
Q Consensus 224 ~~Pvlii~G~~D~~v~~~~~~~l~~~~---~~-~~~~~~~~g-gH~~~-----~~~~~~~~i~~fl~~ 281 (381)
++++|-|-|+.|.+..+.+.....+.+ +. .+..++.+| ||... +.+++...|.+|+.+
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQ 201 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHh
Confidence 478888999999999888766666665 33 345566677 99843 456778888888865
No 242
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=83.37 E-value=2.6 Score=38.65 Aligned_cols=39 Identities=23% Similarity=0.152 Sum_probs=28.5
Q ss_pred CCCcEEEEEEchhHHHHHHhhccCC-----C-ccEEEeccCccCH
Q 016885 134 QTSRIGLWGRSMGAVTSLLYGAEDP-----S-IAGMVLDSAFSDL 172 (381)
Q Consensus 134 ~~~~i~l~G~S~GG~~a~~~a~~~p-----~-v~~vi~~~~~~~~ 172 (381)
+..+|.|+|||+|+.+...++.... . |.-+++++++...
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~ 262 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPS 262 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCC
Confidence 3468999999999999876554322 1 7888888876543
No 243
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=80.50 E-value=11 Score=30.82 Aligned_cols=39 Identities=21% Similarity=0.268 Sum_probs=31.6
Q ss_pred CCCCcEEEEeCCCCCChhcH--HHHHHHhccCCcEEEEeCC
Q 016885 63 DTPLPCVVYCHGNSGCRADA--NEAAVILLPSNITLFTLDF 101 (381)
Q Consensus 63 ~~~~p~vv~~HG~~~~~~~~--~~~~~~l~~~G~~vi~~D~ 101 (381)
.+..|.+|++-|+.|+..+. ..+.+.|.++|++++..|-
T Consensus 19 ~~~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LDG 59 (197)
T COG0529 19 KGQKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLDG 59 (197)
T ss_pred hCCCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEecC
Confidence 35678999999999887653 4556788889999999984
No 244
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=77.24 E-value=54 Score=29.30 Aligned_cols=102 Identities=22% Similarity=0.227 Sum_probs=57.1
Q ss_pred CCCCcEEEEeCCCCCChhc-HHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchhhHHHHHHHHHHhcCCC--CcEE
Q 016885 63 DTPLPCVVYCHGNSGCRAD-ANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQT--SRIG 139 (381)
Q Consensus 63 ~~~~p~vv~~HG~~~~~~~-~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~i~~l~~~~~~--~~i~ 139 (381)
..+.|.|+++-...|+... .+..++.|... ..|+.-|+-.-..-+ ...+. -|+.+-|+|+.+-... ..++
T Consensus 100 r~pdPkvLivapmsGH~aTLLR~TV~alLp~-~~vyitDW~dAr~Vp---~~~G~---FdldDYIdyvie~~~~~Gp~~h 172 (415)
T COG4553 100 RKPDPKVLIVAPMSGHYATLLRGTVEALLPY-HDVYITDWVDARMVP---LEAGH---FDLDDYIDYVIEMINFLGPDAH 172 (415)
T ss_pred cCCCCeEEEEecccccHHHHHHHHHHHhccc-cceeEeeccccceee---cccCC---ccHHHHHHHHHHHHHHhCCCCc
Confidence 4557888888888877655 45667777764 567777776332211 11121 1333334444332211 3467
Q ss_pred EEEEchhHH-----HHHHhhccCCC-ccEEEeccCccC
Q 016885 140 LWGRSMGAV-----TSLLYGAEDPS-IAGMVLDSAFSD 171 (381)
Q Consensus 140 l~G~S~GG~-----~a~~~a~~~p~-v~~vi~~~~~~~ 171 (381)
+++-+.-+. +++..+...|. ...+++++++.+
T Consensus 173 v~aVCQP~vPvLAAisLM~~~~~p~~PssMtlmGgPID 210 (415)
T COG4553 173 VMAVCQPTVPVLAAISLMEEDGDPNVPSSMTLMGGPID 210 (415)
T ss_pred EEEEecCCchHHHHHHHHHhcCCCCCCceeeeecCccc
Confidence 777776554 33344444565 688888877664
No 245
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=77.05 E-value=35 Score=30.88 Aligned_cols=130 Identities=18% Similarity=0.246 Sum_probs=77.8
Q ss_pred CCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCCChhc----HHHHH-----------HHhccCCcEEEEeCCC-CCCCCC
Q 016885 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD----ANEAA-----------VILLPSNITLFTLDFS-GSGLSD 108 (381)
Q Consensus 45 ~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~----~~~~~-----------~~l~~~G~~vi~~D~~-G~G~S~ 108 (381)
.++..+.+++|+.... ....+|..+.+.|..|.+.. |..+. .+|.. ..++-+|-| |.|.|-
T Consensus 11 r~~a~~F~wly~~~~~-~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~--adllfvDnPVGaGfSy 87 (414)
T KOG1283|consen 11 RTGAHMFWWLYYATAN-VKSERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKD--ADLLFVDNPVGAGFSY 87 (414)
T ss_pred ecCceEEEEEeeeccc-cccCCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhh--ccEEEecCCCcCceee
Confidence 3567778888865432 23568999999998865432 33221 12222 345555554 777664
Q ss_pred --CC--CcCCCcchhhHHHHHHHHHHhcCC---CCcEEEEEEchhHHHHHHhhccC------C----CccEEEeccCccC
Q 016885 109 --GD--YVSLGWHEKDDLKVVVSYLRGNKQ---TSRIGLWGRSMGAVTSLLYGAED------P----SIAGMVLDSAFSD 171 (381)
Q Consensus 109 --~~--~~~~~~~~~~d~~~~i~~l~~~~~---~~~i~l~G~S~GG~~a~~~a~~~------p----~v~~vi~~~~~~~ 171 (381)
+. +.....+...|+.++++-+-...+ ..++.|+.-|+||-+|..++... . ++.+|++-.++.+
T Consensus 88 Vdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWIS 167 (414)
T KOG1283|consen 88 VDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWIS 167 (414)
T ss_pred ecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCcccC
Confidence 21 111111225566666654444322 27899999999999998877642 2 2678888778777
Q ss_pred HHHHHH
Q 016885 172 LFDLML 177 (381)
Q Consensus 172 ~~~~~~ 177 (381)
+.+...
T Consensus 168 P~D~V~ 173 (414)
T KOG1283|consen 168 PEDFVF 173 (414)
T ss_pred hhHhhh
Confidence 766543
No 246
>PF03283 PAE: Pectinacetylesterase
Probab=75.79 E-value=24 Score=32.84 Aligned_cols=37 Identities=24% Similarity=0.256 Sum_probs=30.1
Q ss_pred hhHHHHHHHHHHhc-CC-CCcEEEEEEchhHHHHHHhhc
Q 016885 119 KDDLKVVVSYLRGN-KQ-TSRIGLWGRSMGAVTSLLYGA 155 (381)
Q Consensus 119 ~~d~~~~i~~l~~~-~~-~~~i~l~G~S~GG~~a~~~a~ 155 (381)
...+.+++++|... .+ .++|+|.|.|.||.-++..+.
T Consensus 137 ~~i~~avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~d 175 (361)
T PF03283_consen 137 YRILRAVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHAD 175 (361)
T ss_pred HHHHHHHHHHHHHhcCcccceEEEeccChHHHHHHHHHH
Confidence 56788999999887 33 389999999999999986443
No 247
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=73.52 E-value=18 Score=30.40 Aligned_cols=63 Identities=21% Similarity=0.247 Sum_probs=42.5
Q ss_pred CCCCcEEEEeCCCCCChhcHHHHHH-HhccCCc-EEEEeCCCCCCCCCCCCcCCCcchhhHHHHHHHHHHhcCCCCcEEE
Q 016885 63 DTPLPCVVYCHGNSGCRADANEAAV-ILLPSNI-TLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGL 140 (381)
Q Consensus 63 ~~~~p~vv~~HG~~~~~~~~~~~~~-~l~~~G~-~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~i~l 140 (381)
+...-+|+++||...+........+ .|.+.|| +|++...-|+ -++..++++++.. +...+.|
T Consensus 135 ~k~e~~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~ve~y---------------P~~d~vi~~l~~~-~~~~v~L 198 (265)
T COG4822 135 NKDEILVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAVEGY---------------PLVDTVIEYLRKN-GIKEVHL 198 (265)
T ss_pred CcCeEEEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEecCC---------------CcHHHHHHHHHHc-CCceEEE
Confidence 4566799999999877765544444 5666788 6666555433 3567789999887 4555555
Q ss_pred E
Q 016885 141 W 141 (381)
Q Consensus 141 ~ 141 (381)
+
T Consensus 199 ~ 199 (265)
T COG4822 199 I 199 (265)
T ss_pred e
Confidence 4
No 248
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=67.80 E-value=8.2 Score=29.70 Aligned_cols=31 Identities=26% Similarity=0.233 Sum_probs=23.4
Q ss_pred CCCCcEEEEeCCCCCChhcHH--HHHHHhccCC
Q 016885 63 DTPLPCVVYCHGNSGCRADAN--EAAVILLPSN 93 (381)
Q Consensus 63 ~~~~p~vv~~HG~~~~~~~~~--~~~~~l~~~G 93 (381)
...+|+|+-+||+.|+...+. -+++.|-..|
T Consensus 49 ~p~KpLVlSfHG~tGtGKn~v~~liA~~ly~~G 81 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTGKNFVSRLIAEHLYKSG 81 (127)
T ss_pred CCCCCEEEEeecCCCCcHHHHHHHHHHHHHhcc
Confidence 567899999999999988763 3556655554
No 249
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=62.38 E-value=25 Score=32.10 Aligned_cols=58 Identities=10% Similarity=0.120 Sum_probs=41.4
Q ss_pred CCcEEEEeeCCCCccChHHHHHHHHHcC------------C-----------C-ceEEEe-CCCCCCC-ChhhHHHHHHH
Q 016885 224 FIPALFGHASEDKFIRARHSDLIFNAYA------------G-----------D-KNIIKF-DGDHNSS-RPQFYYDSVSI 277 (381)
Q Consensus 224 ~~Pvlii~G~~D~~v~~~~~~~l~~~~~------------~-----------~-~~~~~~-~ggH~~~-~~~~~~~~i~~ 277 (381)
.+++|+..|..|.+|+.-..+.+.+.+. + . -.++.+ ++||..+ .|+...+.+..
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~~qP~~al~m~~~ 312 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAEYRPNETFIMFQR 312 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCCcCHHHHHHHHHH
Confidence 4899999999999999988888877763 0 0 222333 3499855 67777777777
Q ss_pred HHHh
Q 016885 278 FFYN 281 (381)
Q Consensus 278 fl~~ 281 (381)
|+..
T Consensus 313 fi~~ 316 (319)
T PLN02213 313 WISG 316 (319)
T ss_pred HHcC
Confidence 8743
No 250
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=58.86 E-value=5.4 Score=32.11 Aligned_cols=50 Identities=20% Similarity=0.240 Sum_probs=28.4
Q ss_pred eCCCCCCCCCCCCcCCCcchhhHHHHHH----HHHHhcCC----CCcEEEEEEchhHH
Q 016885 99 LDFSGSGLSDGDYVSLGWHEKDDLKVVV----SYLRGNKQ----TSRIGLWGRSMGAV 148 (381)
Q Consensus 99 ~D~~G~G~S~~~~~~~~~~~~~d~~~~i----~~l~~~~~----~~~i~l~G~S~GG~ 148 (381)
+-+-|||........++...+..+...+ +.+.+... .++|.|+|.|++..
T Consensus 59 w~lVGHG~~~~~~~~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 59 WQLVGHGRDEFNNQTLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EEEE--EESSTSSSEETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred EEEEEeCCCcCCCceeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 3344677663333333334466777777 66665542 27999999999877
No 251
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=55.22 E-value=12 Score=28.79 Aligned_cols=69 Identities=14% Similarity=0.123 Sum_probs=39.6
Q ss_pred CCccccccccccccCcceeeEEEEEEcCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCC-------------ChhcHH-
Q 016885 18 NPDQYLWERDFMLAGRSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSG-------------CRADAN- 83 (381)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~-------------~~~~~~- 83 (381)
+-++.....-++-+|..|..++-.++...+.-+ ....+|||+||-.- +.+.|.
T Consensus 22 TkpE~~lr~~L~~~G~rfR~~~~~lpGkPDiVl-------------~~y~~viFvHGCFWh~H~c~~a~vPksnt~fWle 88 (150)
T COG3727 22 TKPEKRLRSLLTGQGLRFRVQDKDLPGKPDIVL-------------PKYRCVIFVHGCFWHGHHCYLAKVPKSNTEFWLE 88 (150)
T ss_pred ccHHHHHHHHHhhcceEEEecCCCCCCCCCEee-------------cCceEEEEEeeeeccCCccccccCCCcchHHHHH
Confidence 334445555566677777655554443333211 34679999999642 112221
Q ss_pred ----------HHHHHhccCCcEEEEe
Q 016885 84 ----------EAAVILLPSNITLFTL 99 (381)
Q Consensus 84 ----------~~~~~l~~~G~~vi~~ 99 (381)
..+..|.+.|+.|+++
T Consensus 89 Ki~kNveRD~r~~~~L~~~GwrvlvV 114 (150)
T COG3727 89 KIGKNVERDERDIKRLQQLGWRVLVV 114 (150)
T ss_pred HHhhhhhhhHHHHHHHHHcCCeEEEE
Confidence 2356688889998765
No 252
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=52.82 E-value=27 Score=24.17 Aligned_cols=38 Identities=13% Similarity=0.223 Sum_probs=28.3
Q ss_pred hhHHHHHHHHHHhcCCC---CcEEEEEEchhHHHHHHhhcc
Q 016885 119 KDDLKVVVSYLRGNKQT---SRIGLWGRSMGAVTSLLYGAE 156 (381)
Q Consensus 119 ~~d~~~~i~~l~~~~~~---~~i~l~G~S~GG~~a~~~a~~ 156 (381)
...+...++|++++... +++.++|-|-|=.+|.++++.
T Consensus 20 ~~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAsRIa~a 60 (78)
T PF12242_consen 20 ARNVENQIEYVKSQGKINGPKKVLVIGASTGYGLASRIAAA 60 (78)
T ss_dssp HHHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHHHHHHH
Confidence 57788899999987543 789999999998888766654
No 253
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=52.32 E-value=39 Score=33.26 Aligned_cols=34 Identities=18% Similarity=0.122 Sum_probs=22.7
Q ss_pred HHHHHHHHHhcC-C-CCcEEEEEEchhHHHHHHhhc
Q 016885 122 LKVVVSYLRGNK-Q-TSRIGLWGRSMGAVTSLLYGA 155 (381)
Q Consensus 122 ~~~~i~~l~~~~-~-~~~i~l~G~S~GG~~a~~~a~ 155 (381)
...+++.+.... + ..+|.-+||||||.++=.++.
T Consensus 510 s~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLl 545 (697)
T KOG2029|consen 510 SNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLL 545 (697)
T ss_pred HHHHHHHHHHhccCCCCceEEEecccchHHHHHHHH
Confidence 345555555442 2 378999999999998855443
No 254
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=52.04 E-value=31 Score=34.01 Aligned_cols=34 Identities=21% Similarity=0.175 Sum_probs=27.7
Q ss_pred cEEEEEEchhHHHHHHhhccCCC--ccEEEeccCcc
Q 016885 137 RIGLWGRSMGAVTSLLYGAEDPS--IAGMVLDSAFS 170 (381)
Q Consensus 137 ~i~l~G~S~GG~~a~~~a~~~p~--v~~vi~~~~~~ 170 (381)
-|+.-+.|-||..++.+|.++.+ |.+|+...|..
T Consensus 286 ~VIAssvSNGGgAal~AAEqD~~glIdgVvv~EP~v 321 (690)
T PF10605_consen 286 LVIASSVSNGGGAALAAAEQDTQGLIDGVVVSEPNV 321 (690)
T ss_pred EEEEEeecCccHHHHhHhhcccCCceeeEEecCCcc
Confidence 36777899999999999998877 89999855543
No 255
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=50.84 E-value=33 Score=33.07 Aligned_cols=40 Identities=23% Similarity=0.115 Sum_probs=29.8
Q ss_pred CCCcEEEEEEchhHHHHHHhhcc---CCC---ccEEEeccCccCHH
Q 016885 134 QTSRIGLWGRSMGAVTSLLYGAE---DPS---IAGMVLDSAFSDLF 173 (381)
Q Consensus 134 ~~~~i~l~G~S~GG~~a~~~a~~---~p~---v~~vi~~~~~~~~~ 173 (381)
+..+|.|+|+|+|+-+....... ..+ |..|++.+++....
T Consensus 445 G~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~k 490 (633)
T KOG2385|consen 445 GNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPTK 490 (633)
T ss_pred CCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccCC
Confidence 45899999999999998755442 222 88899988776543
No 256
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=50.82 E-value=48 Score=29.27 Aligned_cols=69 Identities=9% Similarity=0.076 Sum_probs=48.4
Q ss_pred CCCcEEEEeCCCCCChh--cHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchhhHHHHHHHHHHhcCCCCcEEEE
Q 016885 64 TPLPCVVYCHGNSGCRA--DANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLW 141 (381)
Q Consensus 64 ~~~p~vv~~HG~~~~~~--~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~i~l~ 141 (381)
+..|+||++.|+.++.. ....+...|-.+|+.|.++..|.--. ..-.-+-.+.+..+..++|+|+
T Consensus 53 ~~~~vlIv~eG~DaAGKG~~I~~l~~~lDPRg~~V~s~~~Pt~eE-------------~~~p~lWRfw~~lP~~G~i~IF 119 (264)
T TIGR03709 53 GRRSLLLVLQAMDAAGKDGTIRHVMSGVNPQGCQVTSFKAPSAEE-------------LDHDFLWRIHKALPERGEIGIF 119 (264)
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHhcCCCeeEEEeCCCCCHHH-------------HcCchHHHHHHhCCCCCeEEEE
Confidence 45699999999986654 45778889999999999997652100 0001133566666677899999
Q ss_pred EEch
Q 016885 142 GRSM 145 (381)
Q Consensus 142 G~S~ 145 (381)
=.|+
T Consensus 120 ~RSW 123 (264)
T TIGR03709 120 NRSH 123 (264)
T ss_pred cCcc
Confidence 8776
No 257
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=50.56 E-value=23 Score=33.47 Aligned_cols=57 Identities=12% Similarity=0.138 Sum_probs=39.8
Q ss_pred CCcEEEEeeCCCCccChHHHHHHHHHcC--------------C-----------CceEEEeCC-CCCCC--ChhhHHHHH
Q 016885 224 FIPALFGHASEDKFIRARHSDLIFNAYA--------------G-----------DKNIIKFDG-DHNSS--RPQFYYDSV 275 (381)
Q Consensus 224 ~~Pvlii~G~~D~~v~~~~~~~l~~~~~--------------~-----------~~~~~~~~g-gH~~~--~~~~~~~~i 275 (381)
.++||+.+|..|.+++.-..+...+.+. . .-.++.+.+ ||..+ .|+...+.+
T Consensus 330 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGHmvP~dqP~~a~~m~ 409 (415)
T PF00450_consen 330 GIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGHMVPQDQPEAALQMF 409 (415)
T ss_dssp T-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--SSHHHHSHHHHHHHH
T ss_pred cceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEeccEEEEEEcCCcccChhhCHHHHHHHH
Confidence 4899999999999999999999888862 0 112444555 99965 788888888
Q ss_pred HHHHH
Q 016885 276 SIFFY 280 (381)
Q Consensus 276 ~~fl~ 280 (381)
.+|+.
T Consensus 410 ~~fl~ 414 (415)
T PF00450_consen 410 RRFLK 414 (415)
T ss_dssp HHHHC
T ss_pred HHHhc
Confidence 88874
No 258
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=50.12 E-value=38 Score=32.73 Aligned_cols=58 Identities=12% Similarity=0.081 Sum_probs=40.9
Q ss_pred CCcEEEEeeCCCCccChHHHHHHHHHcC--C--------------------------------CceEEEeC-CCCCCC--
Q 016885 224 FIPALFGHASEDKFIRARHSDLIFNAYA--G--------------------------------DKNIIKFD-GDHNSS-- 266 (381)
Q Consensus 224 ~~Pvlii~G~~D~~v~~~~~~~l~~~~~--~--------------------------------~~~~~~~~-ggH~~~-- 266 (381)
.++||+.+|..|.+++.-..+++.+.+. . ...++.+. +||..+
T Consensus 364 gikVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~~~w~~~~~~v~G~vk~~~~~~~~~l~~~~V~~AGH~vp~d 443 (462)
T PTZ00472 364 GVRVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPDVPFSAVDGRWAGLVRSAASNTSSGFSFVQVYNAGHMVPMD 443 (462)
T ss_pred CceEEEEECCcCeecCcHhHHHHHHhCCCCCccchhhcCccccEecCCEeceEEEEEecccCCCeEEEEECCCCccChhh
Confidence 5899999999999999887777776652 0 11222333 488865
Q ss_pred ChhhHHHHHHHHHHh
Q 016885 267 RPQFYYDSVSIFFYN 281 (381)
Q Consensus 267 ~~~~~~~~i~~fl~~ 281 (381)
.|+...+.+..|+..
T Consensus 444 ~P~~~~~~i~~fl~~ 458 (462)
T PTZ00472 444 QPAVALTMINRFLRN 458 (462)
T ss_pred HHHHHHHHHHHHHcC
Confidence 677888888888743
No 259
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=50.11 E-value=49 Score=31.00 Aligned_cols=105 Identities=16% Similarity=0.108 Sum_probs=65.7
Q ss_pred CCCCcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchhhHHHHHHHHHHhcCCC---CcEE
Q 016885 63 DTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQT---SRIG 139 (381)
Q Consensus 63 ~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~i~~l~~~~~~---~~i~ 139 (381)
.....+|+++---.|..+.-...++.+.+.|+.|+-.|..++=.--+......-..+.|+.+..+++...... ..-+
T Consensus 45 g~~~~~villSd~~G~~d~~~s~a~al~~~~Alv~~vd~~~ylaaL~~dd~ecvylisd~Ealsr~~Qr~a~~g~yr~PV 124 (456)
T COG3946 45 GDPQGLVILLSDEAGIGDQERSRADALLARGALVAPVDLGAYLAALGADDNECVYLISDFEALSREAQRAADLGVYRLPV 124 (456)
T ss_pred CCcceeeEEEEcccChhhhhcchhHHHhhcCCeeeccccchhhhccccCCCcceEEehhHHHHhHHHHHHhhccCcccce
Confidence 3445566666554555555566788888999999999988763222222221212245666666655544322 4456
Q ss_pred EEEEchhHHHHHHhhccCCC--ccEEEecc
Q 016885 140 LWGRSMGAVTSLLYGAEDPS--IAGMVLDS 167 (381)
Q Consensus 140 l~G~S~GG~~a~~~a~~~p~--v~~vi~~~ 167 (381)
|.|---||.++...+++.|. +.+.+...
T Consensus 125 l~g~g~Gg~~A~asaaqSp~atlag~Vsld 154 (456)
T COG3946 125 LTGPGQGGTLAYASAAQSPDATLAGAVSLD 154 (456)
T ss_pred EeecCCCcHHHHHHHhhChhhhhcCccCCC
Confidence 78899999999998888775 55555433
No 260
>PRK12467 peptide synthase; Provisional
Probab=49.54 E-value=55 Score=41.02 Aligned_cols=88 Identities=20% Similarity=0.164 Sum_probs=55.5
Q ss_pred CCCcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchhhHHHHHHHHHHhcCCCCcEEEEEE
Q 016885 64 TPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGR 143 (381)
Q Consensus 64 ~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~i~l~G~ 143 (381)
...+.|++.|+..++...+..+...+.. +..++.+..++.-.. +. ....+. .-.....++++......+..+.|+
T Consensus 3690 ~~~~~l~~~h~~~r~~~~~~~l~~~l~~-~~~~~~l~~~~~~~d-~~-~~~~~~--~~~~~y~~~~~~~~~~~p~~l~g~ 3764 (3956)
T PRK12467 3690 TGFPALFCRHEGLGTVFDYEPLAVILEG-DRHVLGLTCRHLLDD-GW-QDTSLQ--AMAVQYADYILWQQAKGPYGLLGW 3764 (3956)
T ss_pred hcccceeeechhhcchhhhHHHHHHhCC-CCcEEEEeccccccc-cC-CccchH--HHHHHHHHHHHHhccCCCeeeeee
Confidence 3457799999999888777777777755 467777776654211 11 111111 122233444444434567899999
Q ss_pred chhHHHHHHhhcc
Q 016885 144 SMGAVTSLLYGAE 156 (381)
Q Consensus 144 S~GG~~a~~~a~~ 156 (381)
|+||.++..++..
T Consensus 3765 s~g~~~a~~~~~~ 3777 (3956)
T PRK12467 3765 SLGGTLARLVAEL 3777 (3956)
T ss_pred ecchHHHHHHHHH
Confidence 9999999877654
No 261
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=49.27 E-value=54 Score=31.39 Aligned_cols=58 Identities=10% Similarity=0.120 Sum_probs=41.9
Q ss_pred CCcEEEEeeCCCCccChHHHHHHHHHcC------------C-----------C-ceEEEe-CCCCCCC-ChhhHHHHHHH
Q 016885 224 FIPALFGHASEDKFIRARHSDLIFNAYA------------G-----------D-KNIIKF-DGDHNSS-RPQFYYDSVSI 277 (381)
Q Consensus 224 ~~Pvlii~G~~D~~v~~~~~~~l~~~~~------------~-----------~-~~~~~~-~ggH~~~-~~~~~~~~i~~ 277 (381)
.+++|+..|..|.+|+.-..+.+.+.+. + . -.++.+ ++||..+ .|+...+.+..
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp~qP~~al~m~~~ 426 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAEYRPNETFIMFQR 426 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCCCCHHHHHHHHHH
Confidence 4799999999999999988888887762 0 0 122333 3599865 67777777777
Q ss_pred HHHh
Q 016885 278 FFYN 281 (381)
Q Consensus 278 fl~~ 281 (381)
|+..
T Consensus 427 Fi~~ 430 (433)
T PLN03016 427 WISG 430 (433)
T ss_pred HHcC
Confidence 8743
No 262
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=48.47 E-value=67 Score=28.96 Aligned_cols=95 Identities=14% Similarity=0.112 Sum_probs=51.5
Q ss_pred EeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCc---CCCcchhhHHHHHHHHHHhcCCCC------cEEEE
Q 016885 71 YCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYV---SLGWHEKDDLKVVVSYLRGNKQTS------RIGLW 141 (381)
Q Consensus 71 ~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~---~~~~~~~~d~~~~i~~l~~~~~~~------~i~l~ 141 (381)
++-|+.|-.. ...+..|.+.||.|+++|--..|....... .+-.-++.|-..+-+.+.+. ..+ -...+
T Consensus 4 LVtGGAGYIG--SHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~-~idaViHFAa~~~V 80 (329)
T COG1087 4 LVTGGAGYIG--SHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAVFEEN-KIDAVVHFAASISV 80 (329)
T ss_pred EEecCcchhH--HHHHHHHHHCCCeEEEEecCCCCCHHHhhhccCceEEeccccHHHHHHHHHhc-CCCEEEECcccccc
Confidence 3344444333 355677888999999999876665432211 11111233433333333333 332 22345
Q ss_pred EEc-----------hhHHHHHHhhccCCCccEEEeccC
Q 016885 142 GRS-----------MGAVTSLLYGAEDPSIAGMVLDSA 168 (381)
Q Consensus 142 G~S-----------~GG~~a~~~a~~~p~v~~vi~~~~ 168 (381)
|-| .+|.+.+.-+.+...|+.+|..+.
T Consensus 81 gESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSSt 118 (329)
T COG1087 81 GESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSST 118 (329)
T ss_pred chhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecc
Confidence 555 366666666666666888887554
No 263
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=47.19 E-value=27 Score=30.96 Aligned_cols=49 Identities=14% Similarity=0.096 Sum_probs=32.6
Q ss_pred HHHHHHHHHhcCCC--CcEEEEEEchhHHHHHHhhccCC----CccEEEeccCcc
Q 016885 122 LKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDP----SIAGMVLDSAFS 170 (381)
Q Consensus 122 ~~~~i~~l~~~~~~--~~i~l~G~S~GG~~a~~~a~~~p----~v~~vi~~~~~~ 170 (381)
+.++.+++.+.+.. -++.|+|-|+|++-+...-.... .+.+++..++..
T Consensus 93 ~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~ 147 (289)
T PF10081_consen 93 FEAVYARWSTLPEDRRPKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPF 147 (289)
T ss_pred HHHHHHHHHhCCcccCCeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCC
Confidence 34444555555444 67999999999988765443322 288888877654
No 264
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=46.89 E-value=64 Score=27.83 Aligned_cols=71 Identities=14% Similarity=0.093 Sum_probs=49.8
Q ss_pred CCcEEEEeCCCCCChh--cHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchhhHHHHHHHHHHhcCCCCcEEEEE
Q 016885 65 PLPCVVYCHGNSGCRA--DANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWG 142 (381)
Q Consensus 65 ~~p~vv~~HG~~~~~~--~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~i~l~G 142 (381)
+.|+||++.|+.++.. ....+...|-.+|+.|.++..|-.-. ..-.-+-.+....+..++|+|+=
T Consensus 29 ~~~vlIv~eG~DaAGKg~~I~~l~~~lDPRg~~v~~~~~pt~eE-------------~~~p~lwRfw~~lP~~G~i~IF~ 95 (230)
T TIGR03707 29 GARVVIVFEGRDAAGKGGTIKRITEHLNPRGARVVALPKPSDRE-------------RTQWYFQRYVQHLPAAGEIVLFD 95 (230)
T ss_pred CCCEEEEEeCCCCCCchHHHHHHHHhcCCCeeEEEeCCCCCHHH-------------HcChHHHHHHHhCCCCCeEEEEe
Confidence 4699999999986654 35678889999999999988762110 01111345666677779999998
Q ss_pred EchhHH
Q 016885 143 RSMGAV 148 (381)
Q Consensus 143 ~S~GG~ 148 (381)
.|+=+-
T Consensus 96 rSwY~~ 101 (230)
T TIGR03707 96 RSWYNR 101 (230)
T ss_pred Cchhhh
Confidence 886443
No 265
>PLN02209 serine carboxypeptidase
Probab=45.70 E-value=64 Score=30.91 Aligned_cols=57 Identities=9% Similarity=0.056 Sum_probs=41.8
Q ss_pred CCcEEEEeeCCCCccChHHHHHHHHHcC-----------------------CC-ceEEEe-CCCCCCC-ChhhHHHHHHH
Q 016885 224 FIPALFGHASEDKFIRARHSDLIFNAYA-----------------------GD-KNIIKF-DGDHNSS-RPQFYYDSVSI 277 (381)
Q Consensus 224 ~~Pvlii~G~~D~~v~~~~~~~l~~~~~-----------------------~~-~~~~~~-~ggH~~~-~~~~~~~~i~~ 277 (381)
.+++|+..|..|-+|+.-..+.+.+.+. +. -.++.+ ++||..+ .|++..+.+.+
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp~qP~~al~m~~~ 430 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAEYLPEESSIMFQR 430 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcCcCHHHHHHHHHH
Confidence 4799999999999999988888887762 01 223333 4599865 67777777878
Q ss_pred HHH
Q 016885 278 FFY 280 (381)
Q Consensus 278 fl~ 280 (381)
|+.
T Consensus 431 fi~ 433 (437)
T PLN02209 431 WIS 433 (437)
T ss_pred HHc
Confidence 874
No 266
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=45.42 E-value=26 Score=31.19 Aligned_cols=30 Identities=17% Similarity=0.106 Sum_probs=22.2
Q ss_pred HHHHhcCCCCcEEEEEEchhHHHHHHhhcc
Q 016885 127 SYLRGNKQTSRIGLWGRSMGAVTSLLYGAE 156 (381)
Q Consensus 127 ~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~ 156 (381)
+.+++..+..+-.++|||+|=+.|+.++..
T Consensus 74 ~~l~~~g~i~p~~v~GhS~GE~aAa~~aG~ 103 (290)
T TIGR00128 74 LKLKEQGGLKPDFAAGHSLGEYSALVAAGA 103 (290)
T ss_pred HHHHHcCCCCCCEEeecCHHHHHHHHHhCC
Confidence 344444337888999999999999887654
No 267
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=44.29 E-value=2.7e+02 Score=26.33 Aligned_cols=93 Identities=6% Similarity=-0.091 Sum_probs=54.4
Q ss_pred cEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCc----------CCCcch----------hh-HHHHH
Q 016885 67 PCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYV----------SLGWHE----------KD-DLKVV 125 (381)
Q Consensus 67 p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~----------~~~~~~----------~~-d~~~~ 125 (381)
|.|+++--+..-...+..+.+.+.+.|..|+.+|.-=.|....... ..++.. ++ -...+
T Consensus 2 ~tI~iigT~DTK~~E~~yl~~~i~~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ga 81 (403)
T PF06792_consen 2 KTIAIIGTLDTKGEELLYLRDQIEAQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARGA 81 (403)
T ss_pred CEEEEEEccCCCHHHHHHHHHHHHHCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHHH
Confidence 4455554444444556777788888999999999854444332110 001100 11 11222
Q ss_pred HHHHHhcC---CCCcEEEEEEchhHHHHHHhhccCCC
Q 016885 126 VSYLRGNK---QTSRIGLWGRSMGAVTSLLYGAEDPS 159 (381)
Q Consensus 126 i~~l~~~~---~~~~i~l~G~S~GG~~a~~~a~~~p~ 159 (381)
..++.+.. .++-|+-+|-|.|..++..+....|-
T Consensus 82 ~~~v~~l~~~g~i~Gvi~~GGs~GT~lat~aMr~LPi 118 (403)
T PF06792_consen 82 ARFVSDLYDEGKIDGVIGIGGSGGTALATAAMRALPI 118 (403)
T ss_pred HHHHHHHHhcCCccEEEEecCCccHHHHHHHHHhCCC
Confidence 33333333 34778889999999999988877764
No 268
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=44.18 E-value=20 Score=32.65 Aligned_cols=31 Identities=19% Similarity=0.276 Sum_probs=23.1
Q ss_pred HHHHHHhcCCCCcEEEEEEchhHHHHHHhhcc
Q 016885 125 VVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAE 156 (381)
Q Consensus 125 ~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~ 156 (381)
+.+.+++. +..+-.++|||+|=+.|+.++..
T Consensus 74 l~~~l~~~-Gi~P~~v~GhSlGE~aA~~aaG~ 104 (318)
T PF00698_consen 74 LARLLRSW-GIKPDAVIGHSLGEYAALVAAGA 104 (318)
T ss_dssp HHHHHHHT-THCESEEEESTTHHHHHHHHTTS
T ss_pred hhhhhccc-ccccceeeccchhhHHHHHHCCc
Confidence 34555444 67888999999999998877653
No 269
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=43.90 E-value=37 Score=27.58 Aligned_cols=34 Identities=24% Similarity=0.154 Sum_probs=26.1
Q ss_pred HHHHHHHhcCCCCcEEEEEEchhHHHHHHhhccCC
Q 016885 124 VVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDP 158 (381)
Q Consensus 124 ~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~p 158 (381)
-+++.|.++ +...-.+.|-|+|+.++..++...+
T Consensus 15 Gvl~aL~e~-gi~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 15 GVAKALRER-GPLIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHHHHc-CCCCCEEEEECHHHHHHHHHHcCCC
Confidence 456666665 4556789999999999999988654
No 270
>TIGR03249 KdgD 5-dehydro-4-deoxyglucarate dehydratase. 5-dehydro-4-deoxyglucarate dehydratase not only catalyzes the dehydration of the substrate (diol to ketone + water), but causes the decarboxylation of the intermediate product to yield 2-oxoglutarate semialdehyde (2,5-dioxopentanoate). The gene for the enzyme is usually observed in the vicinity of transporters and dehydratases handling D-galactarate and D-gluconate as well as aldehyde dehydrogenases which convert the product to alpha-ketoglutarate.
Probab=43.57 E-value=2.4e+02 Score=25.26 Aligned_cols=85 Identities=14% Similarity=0.061 Sum_probs=46.5
Q ss_pred ChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchhhHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhhccC
Q 016885 78 CRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAED 157 (381)
Q Consensus 78 ~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~ 157 (381)
+...+..+++.+.+.|..-+.+- .|.|+....+.. +-.++++.+.+....+-.+++|-+..-.-++.++...
T Consensus 24 D~~~l~~li~~l~~~Gv~gi~v~-----GstGE~~~Lt~e---Er~~v~~~~~~~~~g~~pvi~gv~~~t~~ai~~a~~a 95 (296)
T TIGR03249 24 DEAAYRENIEWLLGYGLEALFAA-----GGTGEFFSLTPA---EYEQVVEIAVSTAKGKVPVYTGVGGNTSDAIEIARLA 95 (296)
T ss_pred CHHHHHHHHHHHHhcCCCEEEEC-----CCCcCcccCCHH---HHHHHHHHHHHHhCCCCcEEEecCccHHHHHHHHHHH
Confidence 44557788899998887766543 334555555443 3344444444332323334555543333344444333
Q ss_pred CC--ccEEEeccCcc
Q 016885 158 PS--IAGMVLDSAFS 170 (381)
Q Consensus 158 p~--v~~vi~~~~~~ 170 (381)
.+ +++++++.|+.
T Consensus 96 ~~~Gadav~~~pP~y 110 (296)
T TIGR03249 96 EKAGADGYLLLPPYL 110 (296)
T ss_pred HHhCCCEEEECCCCC
Confidence 32 78888888865
No 271
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=43.43 E-value=29 Score=31.05 Aligned_cols=29 Identities=14% Similarity=0.196 Sum_probs=21.8
Q ss_pred HHHHHhcCCCCcEEEEEEchhHHHHHHhhc
Q 016885 126 VSYLRGNKQTSRIGLWGRSMGAVTSLLYGA 155 (381)
Q Consensus 126 i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~ 155 (381)
.+.+++ .+..+-.++|||+|-+.|+.++.
T Consensus 73 ~~~l~~-~Gi~p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 73 ARLWRS-WGVRPDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred HHHHHH-cCCcccEEEecCHHHHHHHHHhC
Confidence 344443 36788899999999999987764
No 272
>KOG1752 consensus Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=42.86 E-value=1.4e+02 Score=22.16 Aligned_cols=79 Identities=18% Similarity=0.279 Sum_probs=47.3
Q ss_pred CCCcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchhhHHHHHHHHHHhcCCCCcEEEEEE
Q 016885 64 TPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGR 143 (381)
Q Consensus 64 ~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~i~l~G~ 143 (381)
...|+|||.--+.........+...+ .-.+.|+-+|-..+| .++...+..+........|+|-|.
T Consensus 12 ~~~~VVifSKs~C~~c~~~k~ll~~~-~v~~~vvELD~~~~g--------------~eiq~~l~~~tg~~tvP~vFI~Gk 76 (104)
T KOG1752|consen 12 SENPVVIFSKSSCPYCHRAKELLSDL-GVNPKVVELDEDEDG--------------SEIQKALKKLTGQRTVPNVFIGGK 76 (104)
T ss_pred hcCCEEEEECCcCchHHHHHHHHHhC-CCCCEEEEccCCCCc--------------HHHHHHHHHhcCCCCCCEEEECCE
Confidence 35688888774433222223333332 124677777765333 345556665554445688999999
Q ss_pred chhHHHHHHhhccC
Q 016885 144 SMGAVTSLLYGAED 157 (381)
Q Consensus 144 S~GG~~a~~~a~~~ 157 (381)
+.||.--+..+...
T Consensus 77 ~iGG~~dl~~lh~~ 90 (104)
T KOG1752|consen 77 FIGGASDLMALHKS 90 (104)
T ss_pred EEcCHHHHHHHHHc
Confidence 99998777655443
No 273
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=41.31 E-value=38 Score=27.22 Aligned_cols=36 Identities=22% Similarity=0.283 Sum_probs=26.8
Q ss_pred CcEEEEeCCCCCChhcH--HHHHHHhccCCcEEEEeCC
Q 016885 66 LPCVVYCHGNSGCRADA--NEAAVILLPSNITLFTLDF 101 (381)
Q Consensus 66 ~p~vv~~HG~~~~~~~~--~~~~~~l~~~G~~vi~~D~ 101 (381)
+|.||++-|..|+.... ..+.+.|.+.|+.|+.+|-
T Consensus 1 ~g~vIwltGlsGsGKtTlA~~L~~~L~~~g~~~~~LDg 38 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKTTLARALERRLFARGIKVYLLDG 38 (156)
T ss_dssp S-EEEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEecC
Confidence 47899999999887653 3556778888999999984
No 274
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=40.42 E-value=42 Score=30.42 Aligned_cols=63 Identities=27% Similarity=0.288 Sum_probs=40.2
Q ss_pred cHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchhhHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhhccCC
Q 016885 81 DANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDP 158 (381)
Q Consensus 81 ~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~p 158 (381)
.+..+++.|..... .++++ |-|- .| ---.-+++.|.+. +...-.++|-|+|+.++..++...+
T Consensus 3 d~~rl~r~l~~~~~-gLvL~--GGG~-RG----------~ahiGvL~aLee~-gi~~d~v~GtSaGAi~ga~ya~g~~ 65 (306)
T cd07225 3 DFSRLARVLTGNSI-ALVLG--GGGA-RG----------CAHIGVIKALEEA-GIPVDMVGGTSIGAFIGALYAEERN 65 (306)
T ss_pred hHHHHHHHhcCCCE-EEEEC--ChHH-HH----------HHHHHHHHHHHHc-CCCCCEEEEECHHHHHHHHHHcCCC
Confidence 46778888887642 33333 3221 11 1224456677666 5566689999999999999998653
No 275
>PRK10279 hypothetical protein; Provisional
Probab=40.25 E-value=38 Score=30.61 Aligned_cols=34 Identities=18% Similarity=0.170 Sum_probs=26.3
Q ss_pred HHHHHHHHhcCCCCcEEEEEEchhHHHHHHhhccC
Q 016885 123 KVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAED 157 (381)
Q Consensus 123 ~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~ 157 (381)
.-+++.|.+. +...-.+.|.|+|+.++..+|...
T Consensus 21 iGVL~aL~E~-gi~~d~i~GtS~GAlvga~yA~g~ 54 (300)
T PRK10279 21 IGVINALKKV-GIEIDIVAGCSIGSLVGAAYACDR 54 (300)
T ss_pred HHHHHHHHHc-CCCcCEEEEEcHHHHHHHHHHcCC
Confidence 3456666664 566778999999999999998754
No 276
>PRK02399 hypothetical protein; Provisional
Probab=39.52 E-value=3.4e+02 Score=25.71 Aligned_cols=92 Identities=12% Similarity=0.103 Sum_probs=51.1
Q ss_pred cEEEEeCCCCCCh-hcHHHHHHHhccCCcEEEEeCCCCCCCCCCCC----------cCCCc-------ch---hhHH-HH
Q 016885 67 PCVVYCHGNSGCR-ADANEAAVILLPSNITLFTLDFSGSGLSDGDY----------VSLGW-------HE---KDDL-KV 124 (381)
Q Consensus 67 p~vv~~HG~~~~~-~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~----------~~~~~-------~~---~~d~-~~ 124 (381)
+.|+++ |...++ ..+..+.+.+.++|..|+.+|.-..|...... ....+ .. ++-+ ..
T Consensus 4 ~~I~ii-gT~DTK~~E~~yl~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~g 82 (406)
T PRK02399 4 KRIYIA-GTLDTKGEELAYVKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEG 82 (406)
T ss_pred CEEEEE-eccCCcHHHHHHHHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHH
Confidence 344444 444444 44556666777789999999984443211100 00000 00 1111 12
Q ss_pred HHHHH---HhcCCCCcEEEEEEchhHHHHHHhhccCCC
Q 016885 125 VVSYL---RGNKQTSRIGLWGRSMGAVTSLLYGAEDPS 159 (381)
Q Consensus 125 ~i~~l---~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~ 159 (381)
+..++ .+....+-|+-+|-|+|..++..+....|-
T Consensus 83 a~~~v~~L~~~g~i~gviglGGs~GT~lat~aMr~LPi 120 (406)
T PRK02399 83 AAAFVRELYERGDVAGVIGLGGSGGTALATPAMRALPI 120 (406)
T ss_pred HHHHHHHHHhcCCccEEEEecCcchHHHHHHHHHhCCC
Confidence 22233 334445788999999999999988877764
No 277
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=38.95 E-value=38 Score=30.31 Aligned_cols=29 Identities=14% Similarity=0.067 Sum_probs=21.6
Q ss_pred HHHHhcCCCCcEEEEEEchhHHHHHHhhcc
Q 016885 127 SYLRGNKQTSRIGLWGRSMGAVTSLLYGAE 156 (381)
Q Consensus 127 ~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~ 156 (381)
+.+++. +..+..++|||+|=+.|+.++..
T Consensus 68 ~~l~~~-g~~P~~v~GhS~GE~aAa~~aG~ 96 (295)
T TIGR03131 68 RALLAL-LPRPSAVAGYSVGEYAAAVVAGV 96 (295)
T ss_pred HHHHhc-CCCCcEEeecCHHHHHHHHHhCC
Confidence 334333 56888999999999999877653
No 278
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=37.47 E-value=53 Score=27.15 Aligned_cols=35 Identities=20% Similarity=0.138 Sum_probs=25.8
Q ss_pred HHHHHHHHhcCCCCcEEEEEEchhHHHHHHhhccCC
Q 016885 123 KVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDP 158 (381)
Q Consensus 123 ~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~p 158 (381)
..+++.+.+. +...=.+.|-|.||.++..++....
T Consensus 15 ~Gvl~~L~e~-~~~~d~i~GtSaGai~aa~~a~g~~ 49 (194)
T cd07207 15 IGALKALEEA-GILKKRVAGTSAGAITAALLALGYS 49 (194)
T ss_pred HHHHHHHHHc-CCCcceEEEECHHHHHHHHHHcCCC
Confidence 3456666654 4455689999999999999987543
No 279
>PF03853 YjeF_N: YjeF-related protein N-terminus; InterPro: IPR004443 The YjeF N-terminal domains occur either as single proteins or fusions with other domains and are commonly associated with enzymes. In bacteria and archaea, YjeF N-terminal domains are often fused to a YjeF C-terminal domain with high structural homology to the members of a ribokinase-like superfamily (see PDOC00806 from PROSITEDOC)and/or belong to operons that encode enzymes of diverse functions: pyridoxal phosphate biosynthetic protein PdxJ; phosphopanteine-protein transferase; ATP/GTP hydrolase; and pyruvate-formate lyase 1-activating enzyme. In plants, the YjeF N-terminal domain is fused to a C-terminal putative pyridoxamine 5'-phosphate oxidase. In eukaryotes, proteins that consist of (Sm)-FDF-YjeF N-terminal domains may be involved in RNA processing [, ]. The YjeF N-terminal domains represent a novel version of the Rossmann fold, one of the most common protein folds in nature observed in numerous enzyme families, that has acquired a set of catalytic residues and structural features that distinguish them from the conventional dehydrogenases. The YjeF N-terminal domain is comprised of a three-layer alpha-beta-alpha sandwich with a central beta-sheet surrounded by helices. The conservation of the acidic residues in the predicted active site of the YjeF N-terminal domains is reminiscent of the presence of such residues in the active sites of diverse hydrolases [, ].; PDB: 3K5W_A 2O8N_A 2DG2_F 3RNO_A 1JZT_B 3D3K_A 3D3J_A 3RSG_A 3RT9_A 3RRF_A ....
Probab=37.44 E-value=36 Score=27.73 Aligned_cols=36 Identities=19% Similarity=0.084 Sum_probs=27.8
Q ss_pred CCCcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEe
Q 016885 64 TPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTL 99 (381)
Q Consensus 64 ~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~ 99 (381)
...+.|+++-|.|.+...-...++.|+++|+.|.++
T Consensus 23 ~~~~~v~il~G~GnNGgDgl~~AR~L~~~G~~V~v~ 58 (169)
T PF03853_consen 23 PKGPRVLILCGPGNNGGDGLVAARHLANRGYNVTVY 58 (169)
T ss_dssp CTT-EEEEEE-SSHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred cCCCeEEEEECCCCChHHHHHHHHHHHHCCCeEEEE
Confidence 456788888888877777778899999999998883
No 280
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=36.74 E-value=41 Score=30.55 Aligned_cols=30 Identities=17% Similarity=0.103 Sum_probs=22.7
Q ss_pred HHHHHhcC-CCCcEEEEEEchhHHHHHHhhc
Q 016885 126 VSYLRGNK-QTSRIGLWGRSMGAVTSLLYGA 155 (381)
Q Consensus 126 i~~l~~~~-~~~~i~l~G~S~GG~~a~~~a~ 155 (381)
.+.+.++. +..+..+.|||+|=+.|+.++.
T Consensus 74 ~~~l~~~~~~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 74 YRVLAEQGLGVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred HHHHHHhcCCCCCceeecccHhHHHHHHHcc
Confidence 34444444 5688899999999999998765
No 281
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=35.72 E-value=63 Score=27.63 Aligned_cols=34 Identities=18% Similarity=0.127 Sum_probs=24.9
Q ss_pred HHHHHHHhcCCCCcEEEEEEchhHHHHHHhhccCC
Q 016885 124 VVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDP 158 (381)
Q Consensus 124 ~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~p 158 (381)
-+++.+.+. +...-.+.|-|.|+.++..++...+
T Consensus 17 GvL~aL~e~-gi~~~~i~GtSaGAi~aa~~a~g~~ 50 (221)
T cd07210 17 GFLAALLEM-GLEPSAISGTSAGALVGGLFASGIS 50 (221)
T ss_pred HHHHHHHHc-CCCceEEEEeCHHHHHHHHHHcCCC
Confidence 455666554 4455579999999999999987543
No 282
>cd00883 beta_CA_cladeA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=35.12 E-value=44 Score=27.65 Aligned_cols=34 Identities=12% Similarity=-0.002 Sum_probs=27.4
Q ss_pred HHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhh
Q 016885 121 DLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYG 154 (381)
Q Consensus 121 d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a 154 (381)
+..+.++|.....+.+.|+|+|||--|.+...+.
T Consensus 66 ~~~asleyAv~~L~v~~IvV~GHs~CGav~a~~~ 99 (182)
T cd00883 66 NCLSVLQYAVDVLKVKHIIVCGHYGCGGVKAALT 99 (182)
T ss_pred chhhhHHHHHHhcCCCEEEEecCCCchHHHHHHc
Confidence 3567788888877899999999998887776554
No 283
>PF04084 ORC2: Origin recognition complex subunit 2 ; InterPro: IPR007220 The Origin Recognition Complex (ORC) is a six-subunit ATP-dependent DNA-binding complex encoded in yeast by ORC1-6 []. ORC is a central component for eukaryotic DNA replication, and binds chromatin at replication origins throughout the cell cycle []. ORC directs DNA replication throughout the genome and is required for its initiation [, , ]. ORC bound at replication origins serves as the foundation for assembly of the pre-replicative complex (pre-RC), which includes Cdc6, Tah11 (aka Cdt1), and the Mcm2-7 complex [, , ]. Pre-RC assembly during G1 is required for replication licensing of chromosomes prior to DNA synthesis during S phase [, , ]. Cell cycle-regulated phosphorylation of Orc2, Orc6, Cdc6, and MCM by the cyclin-dependent protein kinase Cdc28 regulates initiation of DNA replication, including blocking reinitiation in G2/M phase [, , , ]. In yeast, ORC also plays a role in the establishment of silencing at the mating-type loci Hidden MAT Left (HML) and Hidden MAT Right (HMR) [, , ]. ORC participates in the assembly of transcriptionally silent chromatin at HML and HMR by recruiting the Sir1 silencing protein to the HML and HMR silencers [, , ]. Both Orc1 and Orc5 bind ATP, though only Orc1 has ATPase activity []. The binding of ATP by Orc1 is required for ORC binding to DNA and is essential for cell viability []. The ATPase activity of Orc1 is involved in formation of the pre-RC [, , ]. ATP binding by Orc5 is crucial for the stability of ORC as a whole. Only the Orc1-5 subunits are required for origin binding; Orc6 is essential for maintenance of pre-RCs once formed []. Interactions within ORC suggest that Orc2-3-6 may form a core complex []. ORC homologues have been found in various eukaryotes, including fission yeast, insects, amphibians, and humans []. This entry represents subunit 2, which binds the origin of replication. It plays a role in chromosome replication and mating type transcriptional silencing.; GO: 0006260 DNA replication, 0000808 origin recognition complex, 0005634 nucleus
Probab=35.02 E-value=2e+02 Score=26.34 Aligned_cols=96 Identities=17% Similarity=0.060 Sum_probs=53.8
Q ss_pred EEeCCCCCChhcHHHHHHHhccCC--cEEEEeCCCCCCCCC------------CCCcCCCcchhhHHHHHHHHHHhcCCC
Q 016885 70 VYCHGNSGCRADANEAAVILLPSN--ITLFTLDFSGSGLSD------------GDYVSLGWHEKDDLKVVVSYLRGNKQT 135 (381)
Q Consensus 70 v~~HG~~~~~~~~~~~~~~l~~~G--~~vi~~D~~G~G~S~------------~~~~~~~~~~~~d~~~~i~~l~~~~~~ 135 (381)
|+++|+|+-+.-...+++.+.... +.|++++----+.+- .......-...+.+..+++++......
T Consensus 57 lL~YG~GSKr~lL~~Fa~~~l~~~~~~~~vvvnGy~p~~~~k~il~~I~~~l~~~~~~~~~~~~~~~~~i~~~l~~~~~~ 136 (326)
T PF04084_consen 57 LLFYGYGSKRKLLNDFAEKYLSDWGDGPVVVVNGYFPSLSIKDILNTIEEALLPEPSKKPKSPSEQLDFIISYLESRPSP 136 (326)
T ss_pred EEEEecChHHHHHHHHHHHHhhccCCCcEEEEEccCCCCcHHHHHHHHHHHHhhhcccccCCHHHHHHHHHHHHhccCCC
Confidence 677888877777777777666652 566666621111110 010111112234555666677666446
Q ss_pred CcEEEEEEchhHHH--------HHHhhccCCCccEEEe
Q 016885 136 SRIGLWGRSMGAVT--------SLLYGAEDPSIAGMVL 165 (381)
Q Consensus 136 ~~i~l~G~S~GG~~--------a~~~a~~~p~v~~vi~ 165 (381)
.+++|+=|++=|.. ++...+..|+|.-+..
T Consensus 137 ~~l~lvIHnIDg~~LR~~~~Q~~La~LA~~p~I~lIAS 174 (326)
T PF04084_consen 137 PPLYLVIHNIDGPSLRNEKAQSLLAQLASIPNIHLIAS 174 (326)
T ss_pred CceEEEEECCCChhhcChHHHHHHHHHHcCCCeEEEEe
Confidence 78999999987665 3344445566544443
No 284
>PLN03006 carbonate dehydratase
Probab=34.79 E-value=40 Score=30.28 Aligned_cols=33 Identities=15% Similarity=0.090 Sum_probs=27.2
Q ss_pred HHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhh
Q 016885 122 LKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYG 154 (381)
Q Consensus 122 ~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a 154 (381)
+.++++|.....+.+.|+|+|||--|.+...+.
T Consensus 158 ~~aSLEYAV~~L~V~~IVV~GHs~CGaV~Aal~ 190 (301)
T PLN03006 158 TKAALEFSVNTLNVENILVIGHSRCGGIQALMK 190 (301)
T ss_pred hhhhHHHHHHHhCCCEEEEecCCCchHHHHHhh
Confidence 567889998888999999999998777765443
No 285
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=34.53 E-value=39 Score=29.94 Aligned_cols=35 Identities=14% Similarity=0.153 Sum_probs=28.3
Q ss_pred CcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeC
Q 016885 66 LPCVVYCHGNSGCRADANEAAVILLPSNITLFTLD 100 (381)
Q Consensus 66 ~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D 100 (381)
...||++|....+......++..|.++||.++.++
T Consensus 230 ~G~IILmHd~~~T~~aL~~iI~~Lk~kGy~fvtl~ 264 (268)
T TIGR02873 230 PGAMVLMHPTASSTEGLEEMITIIKEKGYKIGTIT 264 (268)
T ss_pred CCcEEEEcCCccHHHHHHHHHHHHHHCCCEEEeHH
Confidence 35788999877666677788899999999998774
No 286
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=34.41 E-value=32 Score=31.39 Aligned_cols=131 Identities=18% Similarity=0.174 Sum_probs=65.2
Q ss_pred hhhccccCCCCCCC--CCccccccccccccCcceeeEEEEEEcCCCeEEEEEEeecCCCCCCCCCcEEEEeCCCCC----
Q 016885 4 QFINFVIRPPRAEY--NPDQYLWERDFMLAGRSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSG---- 77 (381)
Q Consensus 4 ~~~~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~dg~~l~~~~~~P~~~~~~~~~p~vv~~HG~~~---- 77 (381)
.|++.++. -+.-| +|.+-+-.+.|+..|..++.-+.......|..+.+.+.-- +..+...+|++|+-..
T Consensus 138 ~Fl~~f~~-~~~I~ip~PTWgNh~~if~~ag~~~~~yrYyd~~t~gld~~g~ledl----~~~p~gs~ilLhaCaHNPTG 212 (427)
T KOG1411|consen 138 EFLARFYP-SRDIYIPDPTWGNHKNIFKDAGLPVKFYRYYDPKTRGLDFKGMLEDL----GEAPEGSIILLHACAHNPTG 212 (427)
T ss_pred HHHHhhcc-ccceeecCCcccccCccccccCcceeeeeeccccccccchHHHHHHH----hcCCCCcEEEeehhhcCCCC
Confidence 45555544 33334 4444333444555555554333333333444444332211 2234557899997654
Q ss_pred ---ChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchhhHHHHHHHHHHhcCCCCcEEEEEEchhHHHHH
Q 016885 78 ---CRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSL 151 (381)
Q Consensus 78 ---~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~ 151 (381)
+.+.|..+.+.+.+++ .+-.+|+-..|..+|+.. .|..++--++ +. ..=+++..|+.-.+.+
T Consensus 213 vDPt~eqw~ki~~~~~~k~-~~pffDmAYQGfaSG~~d-------~DA~avR~F~-~~---g~~~~laQSyAKNMGL 277 (427)
T KOG1411|consen 213 VDPTKEQWEKISDLIKEKN-LLPFFDMAYQGFASGDLD-------KDAQAVRLFV-ED---GHEILLAQSYAKNMGL 277 (427)
T ss_pred CCccHHHHHHHHHHhhhcc-ccchhhhhhcccccCCch-------hhHHHHHHHH-Hc---CCceEeehhhhhhcch
Confidence 3457777777776654 234567766666665532 4444443344 32 2224555565444443
No 287
>PRK06398 aldose dehydrogenase; Validated
Probab=33.89 E-value=1.4e+02 Score=25.92 Aligned_cols=63 Identities=16% Similarity=0.221 Sum_probs=33.2
Q ss_pred EEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchhhHHHHHHHHHHhcC
Q 016885 69 VVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNK 133 (381)
Q Consensus 69 vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~i~~l~~~~ 133 (381)
.+++-|..+... ..+++.|+++|+.|+..+........-........+.+++.++++.+.+..
T Consensus 8 ~vlItGas~gIG--~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 70 (258)
T PRK06398 8 VAIVTGGSQGIG--KAVVNRLKEEGSNVINFDIKEPSYNDVDYFKVDVSNKEQVIKGIDYVISKY 70 (258)
T ss_pred EEEEECCCchHH--HHHHHHHHHCCCeEEEEeCCccccCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 344444433333 567888999999999887542111000011111222456677777776543
No 288
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=33.87 E-value=30 Score=30.43 Aligned_cols=16 Identities=31% Similarity=0.623 Sum_probs=13.3
Q ss_pred CCCCcEEEEEEchhHH
Q 016885 133 KQTSRIGLWGRSMGAV 148 (381)
Q Consensus 133 ~~~~~i~l~G~S~GG~ 148 (381)
.....|.++|||+|..
T Consensus 232 ~~i~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 232 SDIDEIIIYGHSLGEV 247 (270)
T ss_pred cCCCEEEEEeCCCchh
Confidence 3458999999999975
No 289
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=33.37 E-value=1.2e+02 Score=29.32 Aligned_cols=57 Identities=11% Similarity=0.084 Sum_probs=40.4
Q ss_pred CcEEEEeeCCCCccChHHHHHHHHHcCC-----------C-------------ceEEEeCC-CCCCC--ChhhHHHHHHH
Q 016885 225 IPALFGHASEDKFIRARHSDLIFNAYAG-----------D-------------KNIIKFDG-DHNSS--RPQFYYDSVSI 277 (381)
Q Consensus 225 ~Pvlii~G~~D~~v~~~~~~~l~~~~~~-----------~-------------~~~~~~~g-gH~~~--~~~~~~~~i~~ 277 (381)
.+++|..|+.|.+||.-..+...+.+.- . ..+..+.| ||..+ .|+.....+..
T Consensus 364 ~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~~p~~al~m~~~ 443 (454)
T KOG1282|consen 364 YRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYDKPESALIMFQR 443 (454)
T ss_pred eEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCCCcHHHHHHHHH
Confidence 7999999999999999888877666410 0 12233444 99865 66677777888
Q ss_pred HHHh
Q 016885 278 FFYN 281 (381)
Q Consensus 278 fl~~ 281 (381)
|+..
T Consensus 444 fl~g 447 (454)
T KOG1282|consen 444 FLNG 447 (454)
T ss_pred HHcC
Confidence 8854
No 290
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=32.84 E-value=33 Score=28.41 Aligned_cols=34 Identities=9% Similarity=0.051 Sum_probs=24.2
Q ss_pred cEEEEeCCCC---CChhcHHHHHHHhccCCcEEEEeC
Q 016885 67 PCVVYCHGNS---GCRADANEAAVILLPSNITLFTLD 100 (381)
Q Consensus 67 p~vv~~HG~~---~~~~~~~~~~~~l~~~G~~vi~~D 100 (381)
..||++|... .+......++..|.++||.++.++
T Consensus 152 g~Iil~Hd~~~~~~t~~~l~~~i~~l~~~Gy~~vtl~ 188 (191)
T TIGR02764 152 GDIILLHASDSAKQTVKALPTIIKKLKEKGYEFVTIS 188 (191)
T ss_pred CCEEEEeCCCCcHhHHHHHHHHHHHHHHCCCEEEEHH
Confidence 4689999432 234455677888989999988764
No 291
>cd00951 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase (KDGDH), which is member of dihydrodipicolinate synthase (DHDPS) family that comprises several pyruvate-dependent class I aldolases. The enzyme is involved in glucarate metabolism, and its mechanism presumbly involves a Schiff-base intermediate similar to members of DHDPS family. While in the case of Pseudomonas sp. 5-dehydro-4-deoxy-D-glucarate is degraded by KDGDH to 2,5-dioxopentanoate, in certain species of Enterobacteriaceae it is degraded instead to pyruvate and glycerate.
Probab=32.65 E-value=3.6e+02 Score=24.06 Aligned_cols=85 Identities=18% Similarity=0.167 Sum_probs=45.7
Q ss_pred ChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchhhHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhhccC
Q 016885 78 CRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAED 157 (381)
Q Consensus 78 ~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~ 157 (381)
+.+.+..+++++.+.|..-+.+- .|.|+...... ++-.++++.+.+....+-.+++|-+.+..-++.++...
T Consensus 19 D~~~l~~l~~~l~~~Gv~gi~v~-----GstGE~~~Ls~---eEr~~l~~~~~~~~~~~~pvi~gv~~~t~~~i~~a~~a 90 (289)
T cd00951 19 DEDAYRAHVEWLLSYGAAALFAA-----GGTGEFFSLTP---DEYAQVVRAAVEETAGRVPVLAGAGYGTATAIAYAQAA 90 (289)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEC-----cCCcCcccCCH---HHHHHHHHHHHHHhCCCCCEEEecCCCHHHHHHHHHHH
Confidence 34456778888888887766543 23444444443 33344444444332222223445444444555544433
Q ss_pred CC--ccEEEeccCcc
Q 016885 158 PS--IAGMVLDSAFS 170 (381)
Q Consensus 158 p~--v~~vi~~~~~~ 170 (381)
.+ ++++++..|..
T Consensus 91 ~~~Gad~v~~~pP~y 105 (289)
T cd00951 91 EKAGADGILLLPPYL 105 (289)
T ss_pred HHhCCCEEEECCCCC
Confidence 33 88988888765
No 292
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=32.11 E-value=70 Score=28.35 Aligned_cols=34 Identities=21% Similarity=0.223 Sum_probs=25.7
Q ss_pred HHHHHHHHhcCCCCcEEEEEEchhHHHHHHhhccC
Q 016885 123 KVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAED 157 (381)
Q Consensus 123 ~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~ 157 (381)
.-+++.+.+. +..-=.+.|-|+|+.++..+|...
T Consensus 26 iGVL~aLeE~-gi~~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 26 IGILQALEEA-GIPIDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHHHHHHHc-CCCccEEEEECHHHHHHHHHHcCC
Confidence 3456666554 555567999999999999999764
No 293
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=31.73 E-value=88 Score=26.17 Aligned_cols=65 Identities=18% Similarity=0.207 Sum_probs=39.2
Q ss_pred CCcEEEEeCCCCCCh---hcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchhhHHHHHHHHHHhcC
Q 016885 65 PLPCVVYCHGNSGCR---ADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNK 133 (381)
Q Consensus 65 ~~p~vv~~HG~~~~~---~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~i~~l~~~~ 133 (381)
..+.++++||..... ..-..+.+.|.+.|..+...-+++.|-.-.... ...+-...+++|+.+..
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~----~~~~~~~~~~~f~~~~l 210 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPE----NRRDWYERILDFFDKYL 210 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHH----HHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCch----hHHHHHHHHHHHHHHHc
Confidence 578999999987543 334567778888887666666665443111110 11345666777776654
No 294
>PLN00416 carbonate dehydratase
Probab=31.66 E-value=50 Score=29.04 Aligned_cols=34 Identities=18% Similarity=0.096 Sum_probs=27.4
Q ss_pred HHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhh
Q 016885 121 DLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYG 154 (381)
Q Consensus 121 d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a 154 (381)
.+.+.++|.....+.+.|+|+|||--|.+...+.
T Consensus 125 ~~~asLEyAv~~L~V~~IVV~GHs~CGaV~Aa~~ 158 (258)
T PLN00416 125 GVGAAVEYAVVHLKVENILVIGHSCCGGIKGLMS 158 (258)
T ss_pred cchhHHHHHHHHhCCCEEEEecCCCchHHHHHHh
Confidence 4567788888888999999999998777766554
No 295
>COG3580 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=31.59 E-value=1.2e+02 Score=27.35 Aligned_cols=40 Identities=10% Similarity=-0.138 Sum_probs=30.6
Q ss_pred CCCcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCC
Q 016885 64 TPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSG 103 (381)
Q Consensus 64 ~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G 103 (381)
+...+||.-|.+--+.+.-..+.+.+.++|+.|++.|---
T Consensus 201 ~~~gVvLaGrPYh~DpeiNhgI~e~i~~~g~~IlTedsI~ 240 (351)
T COG3580 201 GEKGVVLAGRPYHFDPEINHGIPEKINSRGIPILTEDSIP 240 (351)
T ss_pred CceeEEEeCCccccCcccccchHHHHhhcCCeeeecccch
Confidence 4466777778875555555678889999999999998765
No 296
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=31.03 E-value=73 Score=27.04 Aligned_cols=34 Identities=26% Similarity=0.293 Sum_probs=25.5
Q ss_pred HHHHHHHhcCCCCcEEEEEEchhHHHHHHhhccCC
Q 016885 124 VVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDP 158 (381)
Q Consensus 124 ~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~p 158 (381)
-+++.+.+. +..--.+.|.|.|+.+++.++...+
T Consensus 15 Gvl~aL~e~-g~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 15 GVLKALAEA-GIEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHHHc-CCCCCEEEEECHHHHHHHHHHcCCc
Confidence 355666655 3445579999999999999998665
No 297
>PRK03620 5-dehydro-4-deoxyglucarate dehydratase; Provisional
Probab=30.90 E-value=4e+02 Score=24.00 Aligned_cols=85 Identities=16% Similarity=0.146 Sum_probs=45.8
Q ss_pred ChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchhhHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhhccC
Q 016885 78 CRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAED 157 (381)
Q Consensus 78 ~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~ 157 (381)
+...+..+++.+.+.|..-+.+. .|.|+....... .-.++++.+.+....+--+++|-+.+-.-++.++...
T Consensus 26 D~~~l~~li~~l~~~Gv~Gi~~~-----GstGE~~~Lt~e---Er~~~~~~~~~~~~~~~pvi~gv~~~t~~~i~~~~~a 97 (303)
T PRK03620 26 DEAAYREHLEWLAPYGAAALFAA-----GGTGEFFSLTPD---EYSQVVRAAVETTAGRVPVIAGAGGGTAQAIEYAQAA 97 (303)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEC-----cCCcCcccCCHH---HHHHHHHHHHHHhCCCCcEEEecCCCHHHHHHHHHHH
Confidence 34456778888988887766543 334555554443 3334444443332322223445543334444444433
Q ss_pred C--CccEEEeccCcc
Q 016885 158 P--SIAGMVLDSAFS 170 (381)
Q Consensus 158 p--~v~~vi~~~~~~ 170 (381)
. .++++++..|..
T Consensus 98 ~~~Gadav~~~pP~y 112 (303)
T PRK03620 98 ERAGADGILLLPPYL 112 (303)
T ss_pred HHhCCCEEEECCCCC
Confidence 3 388998888764
No 298
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=30.66 E-value=91 Score=25.35 Aligned_cols=34 Identities=26% Similarity=0.239 Sum_probs=25.1
Q ss_pred HHHHHHHhcCCCCcEEEEEEchhHHHHHHhhccCC
Q 016885 124 VVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDP 158 (381)
Q Consensus 124 ~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~p 158 (381)
-+++.+.+. +...=.+.|-|.|+.++..++....
T Consensus 17 Gvl~~L~e~-g~~~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 17 GVLRALEEE-GIEIDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred HHHHHHHHC-CCCeeEEEEeCHHHHHHHHHHcCCC
Confidence 345666554 4455689999999999999887654
No 299
>PF00484 Pro_CA: Carbonic anhydrase; InterPro: IPR001765 Carbonic anhydrases (4.2.1.1 from EC) (CA) are zinc metalloenzymes which catalyze the reversible hydration of carbon dioxide. In Escherichia coli, CA (gene cynT) is involved in recycling carbon dioxide formed in the bicarbonate-dependent decomposition of cyanate by cyanase (gene cynS). By this action, it prevents the depletion of cellular bicarbonate []. In photosynthetic bacteria and plant chloroplast, CA is essential to inorganic carbon fixation []. Prokaryotic and plant chloroplast CA are structurally and evolutionary related and form a family distinct from the one which groups the many different forms of eukaryotic CA's (see IPR001148 from INTERPRO). Hypothetical proteins yadF from Escherichia coli and HI1301 from Haemophilus influenzae also belong to this family. This family also includes, YbcF and related proteins, which are inactive homologues of bacterial carbonic anhydrase.; GO: 0004089 carbonate dehydratase activity, 0008270 zinc ion binding; PDB: 1DDZ_B 3LAS_A 2W3N_A 2W3Q_A 1G5C_F 3E2A_A 3E2X_B 2A8C_A 2A8D_D 3E3F_A ....
Probab=30.30 E-value=1.2e+02 Score=24.02 Aligned_cols=35 Identities=11% Similarity=0.041 Sum_probs=27.6
Q ss_pred hHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhh
Q 016885 120 DDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYG 154 (381)
Q Consensus 120 ~d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a 154 (381)
.++.+.++|.....+.+.|+|+||+--|.+...+.
T Consensus 39 ~~~~~sle~av~~l~v~~IiV~gHt~CGa~~~~~~ 73 (153)
T PF00484_consen 39 DSALASLEYAVYHLGVKEIIVCGHTDCGAIKAALD 73 (153)
T ss_dssp HHHHHHHHHHHHTST-SEEEEEEETT-HHHHHHHH
T ss_pred cchhhheeeeeecCCCCEEEEEcCCCchHHHHHHh
Confidence 67788899999988999999999998888775443
No 300
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=30.20 E-value=56 Score=28.01 Aligned_cols=35 Identities=17% Similarity=0.114 Sum_probs=26.9
Q ss_pred CcEEEEeCCCC-CChhcHHHHHHHhccCCcEEEEeC
Q 016885 66 LPCVVYCHGNS-GCRADANEAAVILLPSNITLFTLD 100 (381)
Q Consensus 66 ~p~vv~~HG~~-~~~~~~~~~~~~l~~~G~~vi~~D 100 (381)
...||++|... .+.+....++..|.++||.++.++
T Consensus 186 ~g~IiLlHd~~~~t~~aL~~ii~~lk~~Gy~fvtl~ 221 (224)
T TIGR02884 186 PGAILLLHAVSKDNAEALDKIIKDLKEQGYTFKSLD 221 (224)
T ss_pred CCcEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEhH
Confidence 45799999753 445566788899999999998775
No 301
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=29.58 E-value=74 Score=28.77 Aligned_cols=34 Identities=26% Similarity=0.215 Sum_probs=26.0
Q ss_pred HHHHHHHhcCCCCcEEEEEEchhHHHHHHhhccCC
Q 016885 124 VVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDP 158 (381)
Q Consensus 124 ~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~p 158 (381)
-+++.|.+. +...-.|.|.|+|+.++..+|....
T Consensus 28 GVl~aL~e~-gi~~~~iaGtS~GAiva~l~A~g~~ 61 (306)
T COG1752 28 GVLKALEEA-GIPIDVIAGTSAGAIVAALYAAGMD 61 (306)
T ss_pred HHHHHHHHc-CCCccEEEecCHHHHHHHHHHcCCC
Confidence 345555554 5677889999999999999998643
No 302
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=29.35 E-value=74 Score=28.69 Aligned_cols=32 Identities=22% Similarity=0.195 Sum_probs=22.7
Q ss_pred CCCCCcEEEEeCCCCCChhcHH--HHHHHhccCC
Q 016885 62 EDTPLPCVVYCHGNSGCRADAN--EAAVILLPSN 93 (381)
Q Consensus 62 ~~~~~p~vv~~HG~~~~~~~~~--~~~~~l~~~G 93 (381)
....+|+++=+||+.|+...|. -+++.+-..|
T Consensus 105 ~~p~KPLvLSfHG~tGTGKN~Va~iiA~n~~~~G 138 (344)
T KOG2170|consen 105 PNPRKPLVLSFHGWTGTGKNYVAEIIAENLYRGG 138 (344)
T ss_pred CCCCCCeEEEecCCCCCchhHHHHHHHHHHHhcc
Confidence 3577999999999999988763 2344444433
No 303
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=29.12 E-value=80 Score=28.69 Aligned_cols=33 Identities=12% Similarity=-0.001 Sum_probs=22.2
Q ss_pred HHHHHHHhcCCC---C-cEEEEEEchhHHHHHHhhcc
Q 016885 124 VVVSYLRGNKQT---S-RIGLWGRSMGAVTSLLYGAE 156 (381)
Q Consensus 124 ~~i~~l~~~~~~---~-~i~l~G~S~GG~~a~~~a~~ 156 (381)
.+++.+.+..+. + -=.+.|.|+||.+|+.++..
T Consensus 16 ~vL~~le~~~g~~i~~~fD~i~GTStGgiIA~~la~g 52 (312)
T cd07212 16 QMLIAIEKALGRPIRELFDWIAGTSTGGILALALLHG 52 (312)
T ss_pred HHHHHHHHHhCCCchhhccEEEeeChHHHHHHHHHcC
Confidence 345555554332 1 12589999999999999863
No 304
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=28.74 E-value=1e+02 Score=24.97 Aligned_cols=34 Identities=26% Similarity=0.177 Sum_probs=24.6
Q ss_pred HHHHHHHHhcCCCCcEEEEEEchhHHHHHHhhccC
Q 016885 123 KVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAED 157 (381)
Q Consensus 123 ~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~ 157 (381)
..++++|.+. +...-.+.|-|.|+.++..++...
T Consensus 16 ~Gvl~~L~~~-~~~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 16 IGVLKALEEA-GIPIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHHHHHHHc-CCCeeEEEEECHHHHHHHHHHcCC
Confidence 3455666554 344557999999999999988654
No 305
>COG3494 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=28.49 E-value=1.4e+02 Score=26.13 Aligned_cols=57 Identities=14% Similarity=0.216 Sum_probs=41.4
Q ss_pred HHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcc--hhhHHHHHHHHHHhcCCCCcEEEEE
Q 016885 83 NEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWH--EKDDLKVVVSYLRGNKQTSRIGLWG 142 (381)
Q Consensus 83 ~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~--~~~d~~~~i~~l~~~~~~~~i~l~G 142 (381)
..++....++|+.++.+-++|.-.-. ...+.+. .+-++..++.+++.+ +.++|++.|
T Consensus 18 ~~va~~a~~~G~~~~ii~l~~eaD~~--~~~~e~~~~~iG~vg~lik~l~~~-~v~~vVl~G 76 (279)
T COG3494 18 LEVAENARNQGYAPFIIGLRGEADPE--LKEFEYKEVSIGEVGKLIKLLKTE-GVDRVVLAG 76 (279)
T ss_pred HHHHHHHHhCCCCcEEEEecCccchh--hhcCCCeEEeHHHHHHHHHHHHHc-CCcEEEEec
Confidence 45677888899999999998754432 2222222 267889999999887 678888887
No 306
>PRK15219 carbonic anhydrase; Provisional
Probab=28.42 E-value=67 Score=28.04 Aligned_cols=34 Identities=9% Similarity=0.016 Sum_probs=27.7
Q ss_pred HHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhh
Q 016885 121 DLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYG 154 (381)
Q Consensus 121 d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a 154 (381)
++...++|.....+.+.|+|+|||--|.+...+.
T Consensus 128 ~~~~slEyAv~~L~v~~IvVlGHt~CGav~Aa~~ 161 (245)
T PRK15219 128 DLLGSMEFACAVAGAKVVLVMGHTACGAVKGAID 161 (245)
T ss_pred chhhHHHHHHHHcCCCEEEEecCCcchHHHHHHh
Confidence 4567888988888999999999998777766554
No 307
>cd00884 beta_CA_cladeB Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=28.39 E-value=64 Score=26.92 Aligned_cols=34 Identities=15% Similarity=0.110 Sum_probs=27.4
Q ss_pred HHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhh
Q 016885 121 DLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYG 154 (381)
Q Consensus 121 d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a 154 (381)
...+.++|.....+.+.|+++|||--|.+...+.
T Consensus 72 ~~~asleyav~~l~v~~ivV~GH~~Cgav~Aa~~ 105 (190)
T cd00884 72 GTSAAIEYAVAVLKVEHIVVCGHSDCGGIRALLS 105 (190)
T ss_pred chhhhHHHHHHHhCCCEEEEeCCCcchHHHHHhc
Confidence 3667888888888899999999998777776554
No 308
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=28.37 E-value=88 Score=27.01 Aligned_cols=35 Identities=20% Similarity=0.088 Sum_probs=25.9
Q ss_pred HHHHHHHHhcCCCC--cEEEEEEchhHHHHHHhhccCC
Q 016885 123 KVVVSYLRGNKQTS--RIGLWGRSMGAVTSLLYGAEDP 158 (381)
Q Consensus 123 ~~~i~~l~~~~~~~--~i~l~G~S~GG~~a~~~a~~~p 158 (381)
.-++++|.++ +.. .-.+.|-|.|+.++..++...+
T Consensus 15 ~GVl~~L~e~-gi~~~~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 15 LGVLSLLIEA-GVINETTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred HHHHHHHHHc-CCCCCCCEEEEEcHHHHHHHHHHcCCC
Confidence 3466777765 342 4479999999999999987643
No 309
>PF03976 PPK2: Polyphosphate kinase 2 (PPK2); InterPro: IPR022488 This presumed domain is found in one or two copies per protein. The domain is about 230 amino acids in length and has many conserved motifs, it has polyphosphate kinase activity [, ].; PDB: 3CZP_A 3RHF_D 3CZQ_B.
Probab=28.24 E-value=37 Score=29.24 Aligned_cols=70 Identities=14% Similarity=0.199 Sum_probs=42.4
Q ss_pred CCcEEEEeCCCCCChhc--HHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchhhHHHHHHHHHHhcCCCCcEEEEE
Q 016885 65 PLPCVVYCHGNSGCRAD--ANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWG 142 (381)
Q Consensus 65 ~~p~vv~~HG~~~~~~~--~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~i~l~G 142 (381)
..|+||++.|+.++... ...+...|-.+|+.|.++.-|.--.... .-+-.|....+..++|+|+=
T Consensus 29 ~~~vlIl~eG~d~sGKg~~I~~l~~~lDPR~~~v~~~~~pt~eE~~~-------------p~lwRfw~~lP~~G~I~if~ 95 (228)
T PF03976_consen 29 GIPVLILFEGWDASGKGGTINRLIEWLDPRGFRVHAFGKPTDEELRR-------------PFLWRFWRALPARGQIGIFD 95 (228)
T ss_dssp HHEEEEEEEESTTSSHHHHHHHHHCCS-GGGEEEEE-SS--HHHHTS--------------TTHHHHTTS--TT-EEEEE
T ss_pred CCcEEEEEeccccCCchHHHHHHHHhCCCCeeEEEeCCCCChhHcCC-------------CcHHHHHHhCCCCCEEEEEe
Confidence 35799999999877653 4667778888999999998772211100 01246666776678999998
Q ss_pred EchhH
Q 016885 143 RSMGA 147 (381)
Q Consensus 143 ~S~GG 147 (381)
.|+=+
T Consensus 96 rSWY~ 100 (228)
T PF03976_consen 96 RSWYE 100 (228)
T ss_dssp S-GGG
T ss_pred cchhh
Confidence 88643
No 310
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=27.39 E-value=73 Score=31.42 Aligned_cols=28 Identities=11% Similarity=-0.209 Sum_probs=23.0
Q ss_pred hcCCCCcEEEEEEchhHHHHHHhhccCC
Q 016885 131 GNKQTSRIGLWGRSMGAVTSLLYGAEDP 158 (381)
Q Consensus 131 ~~~~~~~i~l~G~S~GG~~a~~~a~~~p 158 (381)
+..++.+-.++|||+|=+.|+.+|.-..
T Consensus 260 ~~~GI~Pdav~GHSlGE~aAa~aAGvls 287 (538)
T TIGR02816 260 DEFAIKPDFALGYSKGEASMWASLGVWK 287 (538)
T ss_pred HhcCCCCCEEeecCHHHHHHHHHhCCCC
Confidence 4457788899999999999998887553
No 311
>PRK07577 short chain dehydrogenase; Provisional
Probab=27.19 E-value=2.2e+02 Score=23.90 Aligned_cols=30 Identities=10% Similarity=0.003 Sum_probs=20.6
Q ss_pred EeCCCCCChhcHHHHHHHhccCCcEEEEeCCC
Q 016885 71 YCHGNSGCRADANEAAVILLPSNITLFTLDFS 102 (381)
Q Consensus 71 ~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~ 102 (381)
++-|..+... ..+++.|+++|+.|+..+..
T Consensus 7 lItG~s~~iG--~~ia~~l~~~G~~v~~~~r~ 36 (234)
T PRK07577 7 LVTGATKGIG--LALSLRLANLGHQVIGIARS 36 (234)
T ss_pred EEECCCCcHH--HHHHHHHHHCCCEEEEEeCC
Confidence 3445444333 46788899999999988754
No 312
>PLN03014 carbonic anhydrase
Probab=27.18 E-value=57 Score=29.90 Aligned_cols=34 Identities=15% Similarity=0.095 Sum_probs=27.2
Q ss_pred HHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhh
Q 016885 121 DLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYG 154 (381)
Q Consensus 121 d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a 154 (381)
++.+.++|.....+.+.|+|+|||--|.+...+.
T Consensus 205 ~v~asLEYAV~~L~V~~IVV~GHs~CGaV~Aa~~ 238 (347)
T PLN03014 205 GVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMS 238 (347)
T ss_pred cchhHHHHHHHHhCCCEEEEeCCCCchHHHHHHh
Confidence 3667889988888999999999997776665443
No 313
>TIGR00632 vsr DNA mismatch endonuclease Vsr. All proteins in this family for which functions are known are G:T mismatch endonucleases that function in a specialized mismatch repair process used usually to repair G:T mismatches in specific sections of the genome. This family was based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). Members of this family typically are found near to a DNA cytosine methyltransferase.
Probab=26.77 E-value=90 Score=23.71 Aligned_cols=14 Identities=7% Similarity=0.000 Sum_probs=11.2
Q ss_pred HHHhccCCcEEEEe
Q 016885 86 AVILLPSNITLFTL 99 (381)
Q Consensus 86 ~~~l~~~G~~vi~~ 99 (381)
...|.+.|+.|+.+
T Consensus 100 ~~~L~~~Gw~Vlr~ 113 (117)
T TIGR00632 100 NSRLQELGWRVLRV 113 (117)
T ss_pred HHHHHHCcCEEEEE
Confidence 45688889999876
No 314
>TIGR03708 poly_P_AMP_trns polyphosphate:AMP phosphotransferase. Members of this protein family contain a domain duplication. The characterized member from Acinetobacter johnsonii is polyphosphate:AMP phosphotransferase (PAP), which can transfer the terminal phosphate from poly(P) to AMP, yielding ADP. In the opposite direction, this enzyme can synthesize poly(P). Each domain of this protein family is homologous to polyphosphate kinase, an enzyme that can run in the forward direction to extend a polyphosphate chain with a new terminal phosphate from ATP, or in reverse to make ATP (or GTP) from ADP (or GDP).
Probab=26.73 E-value=2e+02 Score=28.06 Aligned_cols=73 Identities=14% Similarity=0.173 Sum_probs=50.1
Q ss_pred CCCcEEEEeCCCCCChh--cHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchhhHHHHHHHHHHhcCCCCcEEEE
Q 016885 64 TPLPCVVYCHGNSGCRA--DANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLW 141 (381)
Q Consensus 64 ~~~p~vv~~HG~~~~~~--~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~i~l~ 141 (381)
...|+||++.|+.++.. ....+...|-.+|+.|.++..|..-... . .-+-.+....+..+.|+|+
T Consensus 37 ~~~~vlIv~eG~DaaGKg~~I~~l~~~ldprg~~v~~~~~P~~eE~~-----------~--~flwRfw~~lP~~G~I~IF 103 (493)
T TIGR03708 37 AGFPVIILIEGWDGAGKGETINLLNEWMDPRGIETHAFGRPSDEERE-----------R--PPMWRFWRRLPPKGKIGIF 103 (493)
T ss_pred cCCeEEEEEeCCCCCChHHHHHHHHHHhCcCccEEEeCCCCCHHHhc-----------C--cHHHHHHHhCCCCCeEEEE
Confidence 46799999999987654 3577888999999999999887421111 0 0123455555666888888
Q ss_pred EEchhHHH
Q 016885 142 GRSMGAVT 149 (381)
Q Consensus 142 G~S~GG~~ 149 (381)
=.|+=+-+
T Consensus 104 dRSWY~~v 111 (493)
T TIGR03708 104 FGSWYTRP 111 (493)
T ss_pred cCcccchh
Confidence 88864433
No 315
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=26.66 E-value=2e+02 Score=23.57 Aligned_cols=79 Identities=15% Similarity=0.191 Sum_probs=47.2
Q ss_pred CcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCCC-----CC---CcCCCcchhhHHHHHHHHHHhcCCCCc
Q 016885 66 LPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSD-----GD---YVSLGWHEKDDLKVVVSYLRGNKQTSR 137 (381)
Q Consensus 66 ~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~-----~~---~~~~~~~~~~d~~~~i~~l~~~~~~~~ 137 (381)
+.+|-++.|+.+... ...++.|+.+|..|+..|+|..+..+ +. +.+..-..-+|+.+++...+..+ .+
T Consensus 8 kglvalvtggasglg--~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kf--gr 83 (260)
T KOG1199|consen 8 KGLVALVTGGASGLG--KATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKF--GR 83 (260)
T ss_pred cCeeEEeecCccccc--HHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhc--cc
Confidence 445666666544322 45688999999999999999765433 11 11112222478888887776654 34
Q ss_pred EEEEEEchhHH
Q 016885 138 IGLWGRSMGAV 148 (381)
Q Consensus 138 i~l~G~S~GG~ 148 (381)
+-+.=.+.|-.
T Consensus 84 ld~~vncagia 94 (260)
T KOG1199|consen 84 LDALVNCAGIA 94 (260)
T ss_pred eeeeeecccee
Confidence 44444444433
No 316
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=26.65 E-value=2.5e+02 Score=22.94 Aligned_cols=54 Identities=13% Similarity=0.057 Sum_probs=38.6
Q ss_pred HhccCCcEEEEeCCCCCCCCCCCCcCCCcchhhHHHHHHHHHHhcCCCCcEEEEEEchh
Q 016885 88 ILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMG 146 (381)
Q Consensus 88 ~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~i~l~G~S~G 146 (381)
.|.+.|+..+.+|.-.+=...... .-..++.+.++.+++..+.++|.|+--|.|
T Consensus 35 ~Lk~~Gik~li~DkDNTL~~~~~~-----~i~~~~~~~~~~l~~~~~~~~v~IvSNsaG 88 (168)
T PF09419_consen 35 HLKKKGIKALIFDKDNTLTPPYED-----EIPPEYAEWLNELKKQFGKDRVLIVSNSAG 88 (168)
T ss_pred hhhhcCceEEEEcCCCCCCCCCcC-----cCCHHHHHHHHHHHHHCCCCeEEEEECCCC
Confidence 478889999999997552111111 113678888888888866678999999886
No 317
>COG3933 Transcriptional antiterminator [Transcription]
Probab=26.48 E-value=4.6e+02 Score=25.18 Aligned_cols=75 Identities=21% Similarity=0.267 Sum_probs=47.8
Q ss_pred CCCCcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchhhHH-HHHHHHHHhcCCCCcEEEE
Q 016885 63 DTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDL-KVVVSYLRGNKQTSRIGLW 141 (381)
Q Consensus 63 ~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~-~~~i~~l~~~~~~~~i~l~ 141 (381)
.+...+||..||... ..++...+..|...+ .+.++|+|= + ....|+ .++.+++++.. ..+=.++
T Consensus 106 ~~~v~vIiiAHG~sT-ASSmaevanrLL~~~-~~~aiDMPL---------d---vsp~~vle~l~e~~k~~~-~~~Glll 170 (470)
T COG3933 106 NPRVKVIIIAHGYST-ASSMAEVANRLLGEE-IFIAIDMPL---------D---VSPSDVLEKLKEYLKERD-YRSGLLL 170 (470)
T ss_pred CCceeEEEEecCcch-HHHHHHHHHHHhhcc-ceeeecCCC---------c---CCHHHHHHHHHHHHHhcC-ccCceEE
Confidence 355679999999954 566788888888875 478999982 1 112444 44556666653 3331223
Q ss_pred EEchhHHHHHH
Q 016885 142 GRSMGAVTSLL 152 (381)
Q Consensus 142 G~S~GG~~a~~ 152 (381)
=-.||...+..
T Consensus 171 LVDMGSL~~f~ 181 (470)
T COG3933 171 LVDMGSLTSFG 181 (470)
T ss_pred EEecchHHHHH
Confidence 34788877654
No 318
>PLN02154 carbonic anhydrase
Probab=26.21 E-value=75 Score=28.40 Aligned_cols=34 Identities=15% Similarity=0.119 Sum_probs=27.2
Q ss_pred HHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhh
Q 016885 121 DLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYG 154 (381)
Q Consensus 121 d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a 154 (381)
...+.++|.....+.+.|+|+|||--|.+...+.
T Consensus 151 ~~~aslEyAv~~L~v~~IvV~GHs~CGAV~Aal~ 184 (290)
T PLN02154 151 ETNSALEFAVTTLQVENIIVMGHSNCGGIAALMS 184 (290)
T ss_pred chhhHHHHHHHHhCCCEEEEecCCCchHHHHHHh
Confidence 3567888888888999999999997777666554
No 319
>PF01656 CbiA: CobQ/CobB/MinD/ParA nucleotide binding domain; InterPro: IPR002586 This entry consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from Salmonella typhimurium []., and CobQ from Rhodobacter capsulatus []. These amidases catalyse amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria [].; PDB: 3K9G_A 3K9H_B 3EZ9_B 3EZF_A 3EZ2_B 3EZ6_A 3EZ7_A 1G3Q_A 1G3R_A 1DTS_A ....
Probab=26.17 E-value=68 Score=26.25 Aligned_cols=33 Identities=18% Similarity=0.265 Sum_probs=22.0
Q ss_pred EEeCCCCCChhc--HHHHHHHhccCCcEEEEeCCC
Q 016885 70 VYCHGNSGCRAD--ANEAAVILLPSNITLFTLDFS 102 (381)
Q Consensus 70 v~~HG~~~~~~~--~~~~~~~l~~~G~~vi~~D~~ 102 (381)
.+.++-||.... ...++..|+++|+.|+.+|.-
T Consensus 2 ~v~~~kGG~GKTt~a~~la~~la~~g~~VlliD~D 36 (195)
T PF01656_consen 2 AVTSGKGGVGKTTIAANLAQALARKGKKVLLIDLD 36 (195)
T ss_dssp EEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEES
T ss_pred EEEcCCCCccHHHHHHHHHhccccccccccccccC
Confidence 334444444433 356788999999999999984
No 320
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=26.03 E-value=82 Score=23.91 Aligned_cols=31 Identities=13% Similarity=0.090 Sum_probs=24.7
Q ss_pred HHHHHHHHHHhcCCCCcEEEEEEchhHHHHH
Q 016885 121 DLKVVVSYLRGNKQTSRIGLWGRSMGAVTSL 151 (381)
Q Consensus 121 d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~ 151 (381)
+....++|.....+.+.|.++||+--|.+..
T Consensus 44 ~~~~sl~~av~~l~v~~ivV~gHt~CG~v~a 74 (119)
T cd00382 44 DVLASLEYAVEVLGVKHIIVCGHTDCGAVKA 74 (119)
T ss_pred cHHHHHHHHHHhhCCCEEEEEccCCCcHHHH
Confidence 5677788888877889999999987666554
No 321
>PLN03019 carbonic anhydrase
Probab=25.99 E-value=61 Score=29.51 Aligned_cols=34 Identities=15% Similarity=0.095 Sum_probs=26.9
Q ss_pred HHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhh
Q 016885 121 DLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYG 154 (381)
Q Consensus 121 d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a 154 (381)
.+.+.++|.....+...|+|+|||--|.+...+.
T Consensus 200 ~v~aSIEYAV~~L~V~~IVV~GHs~CGaVkAal~ 233 (330)
T PLN03019 200 GVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMS 233 (330)
T ss_pred ccchhHHHHHHHhCCCEEEEecCCCchHHHHHHh
Confidence 3567888888888999999999997776665543
No 322
>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes. Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.
Probab=25.68 E-value=1.1e+02 Score=26.22 Aligned_cols=31 Identities=16% Similarity=0.090 Sum_probs=22.2
Q ss_pred cEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCC
Q 016885 67 PCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFS 102 (381)
Q Consensus 67 p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~ 102 (381)
+.=|++.|-|.+.+ +..|+++||.|+.+|+-
T Consensus 38 ~~rvLvPgCG~g~D-----~~~La~~G~~VvGvDls 68 (218)
T PF05724_consen 38 GGRVLVPGCGKGYD-----MLWLAEQGHDVVGVDLS 68 (218)
T ss_dssp SEEEEETTTTTSCH-----HHHHHHTTEEEEEEES-
T ss_pred CCeEEEeCCCChHH-----HHHHHHCCCeEEEEecC
Confidence 44566777766544 55688899999999984
No 323
>PRK13256 thiopurine S-methyltransferase; Reviewed
Probab=25.50 E-value=62 Score=27.87 Aligned_cols=29 Identities=10% Similarity=0.178 Sum_probs=19.8
Q ss_pred EEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCC
Q 016885 69 VVYCHGNSGCRADANEAAVILLPSNITLFTLDFS 102 (381)
Q Consensus 69 vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~ 102 (381)
=|++.|-|.+.+ +.+|+++||.|+++|+-
T Consensus 46 rvLvPgCGkg~D-----~~~LA~~G~~V~GvDlS 74 (226)
T PRK13256 46 VCLIPMCGCSID-----MLFFLSKGVKVIGIELS 74 (226)
T ss_pred eEEEeCCCChHH-----HHHHHhCCCcEEEEecC
Confidence 344555544332 55788899999999985
No 324
>TIGR01118 lacA galactose-6-phosphate isomerase, LacA subunit. This family contains members from low GC gram-positive bacteria. Galactose-6-phosphate isomerase is involved in lactose catabolism by the tagatose-6-phosphate pathway.
Probab=24.74 E-value=2.1e+02 Score=22.56 Aligned_cols=72 Identities=13% Similarity=0.123 Sum_probs=39.4
Q ss_pred HHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchhhHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhhccCCCccE
Q 016885 83 NEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAG 162 (381)
Q Consensus 83 ~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~v~~ 162 (381)
..+..+|.++||.|+ |+ |.+.+ ..+ .+-...+.+.+.+.....-|.+.|.-.|-.+ +|.+.+.|++
T Consensus 16 ~~i~~~L~~~G~eV~--D~-G~~~~------~dY--pd~a~~va~~V~~~e~~~GIliCGtGiG~si---aANK~~GIRA 81 (141)
T TIGR01118 16 DVIKNFLVDNGFEVI--DV-TEGDG------QDF--VDVTLAVASEVQKDEQNLGIVIDAYGAGSFM---VATKIKGMIA 81 (141)
T ss_pred HHHHHHHHHCCCEEE--Ec-CCCCC------CCc--HHHHHHHHHHHHcCCCceEEEEcCCCHhHhh---hhhcCCCeEE
Confidence 356778888999875 44 32111 111 2333444455554433345667766665444 3566777777
Q ss_pred EEeccC
Q 016885 163 MVLDSA 168 (381)
Q Consensus 163 vi~~~~ 168 (381)
.....+
T Consensus 82 A~~~d~ 87 (141)
T TIGR01118 82 AEVSDE 87 (141)
T ss_pred EEECCH
Confidence 776544
No 325
>COG0288 CynT Carbonic anhydrase [Inorganic ion transport and metabolism]
Probab=24.54 E-value=72 Score=27.03 Aligned_cols=37 Identities=8% Similarity=-0.007 Sum_probs=29.6
Q ss_pred hHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhhcc
Q 016885 120 DDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAE 156 (381)
Q Consensus 120 ~d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~ 156 (381)
.++...++|.....+.+.|+|+||+--|++...+...
T Consensus 76 ~~~l~sleyAv~~L~v~~IiV~GH~~CGav~aa~~~~ 112 (207)
T COG0288 76 GSVLRSLEYAVYVLGVKEIIVCGHTDCGAVKAALDDQ 112 (207)
T ss_pred cchhHHHHHHHHHcCCCEEEEecCCCcHHHHhccccc
Confidence 4677788888888899999999999888877655543
No 326
>COG0218 Predicted GTPase [General function prediction only]
Probab=24.46 E-value=1.2e+02 Score=25.55 Aligned_cols=58 Identities=10% Similarity=0.173 Sum_probs=33.9
Q ss_pred CCCCcEEEEeeCCCCccChHHH---HHHHHHcC---C-CceEEEeCC-CCCCCChhhHHHHHHHHHHh
Q 016885 222 KTFIPALFGHASEDKFIRARHS---DLIFNAYA---G-DKNIIKFDG-DHNSSRPQFYYDSVSIFFYN 281 (381)
Q Consensus 222 ~i~~Pvlii~G~~D~~v~~~~~---~~l~~~~~---~-~~~~~~~~g-gH~~~~~~~~~~~i~~fl~~ 281 (381)
...+|++++.-..|.+-..+.. ..+.+.+. . ...++.+.. .... -++....|..|+..
T Consensus 133 ~~~i~~~vv~tK~DKi~~~~~~k~l~~v~~~l~~~~~~~~~~~~~ss~~k~G--i~~l~~~i~~~~~~ 198 (200)
T COG0218 133 ELGIPVIVVLTKADKLKKSERNKQLNKVAEELKKPPPDDQWVVLFSSLKKKG--IDELKAKILEWLKE 198 (200)
T ss_pred HcCCCeEEEEEccccCChhHHHHHHHHHHHHhcCCCCccceEEEEecccccC--HHHHHHHHHHHhhc
Confidence 4468999999999998765543 34444442 1 112444443 2221 46677777777643
No 327
>cd01523 RHOD_Lact_B Member of the Rhodanese Homology Domain superfamily. This CD includes predicted proteins with rhodanese-like domains found N-terminal of the metallo-beta-lactamase domain.
Probab=24.14 E-value=1.1e+02 Score=21.95 Aligned_cols=34 Identities=15% Similarity=0.161 Sum_probs=21.4
Q ss_pred CCCcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCC
Q 016885 64 TPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSG 103 (381)
Q Consensus 64 ~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G 103 (381)
...++||+|+.+..+ ...+..|.+.||. +.++.|
T Consensus 60 ~~~~ivv~C~~G~rs----~~aa~~L~~~G~~--~~~l~G 93 (100)
T cd01523 60 DDQEVTVICAKEGSS----QFVAELLAERGYD--VDYLAG 93 (100)
T ss_pred CCCeEEEEcCCCCcH----HHHHHHHHHcCce--eEEeCC
Confidence 346788888755432 3456677888998 344443
No 328
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=24.02 E-value=83 Score=30.02 Aligned_cols=34 Identities=15% Similarity=0.083 Sum_probs=25.2
Q ss_pred HHHHHHHhcCCCCcEEEEEEchhHHHHHHhhccCC
Q 016885 124 VVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDP 158 (381)
Q Consensus 124 ~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~p 158 (381)
-+++.+.++ +..+=++.|-|.|+.+|..++...+
T Consensus 90 GVLkaL~E~-gl~p~vIsGTSaGAivAal~as~~~ 123 (421)
T cd07230 90 GVLKALFEA-NLLPRIISGSSAGSIVAAILCTHTD 123 (421)
T ss_pred HHHHHHHHc-CCCCCEEEEECHHHHHHHHHHcCCH
Confidence 456666554 4444479999999999999988654
No 329
>PRK10437 carbonic anhydrase; Provisional
Probab=23.76 E-value=94 Score=26.61 Aligned_cols=34 Identities=15% Similarity=0.019 Sum_probs=27.2
Q ss_pred HHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhh
Q 016885 121 DLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYG 154 (381)
Q Consensus 121 d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a 154 (381)
+....++|.....+.+.|+|+||+--|.+...+.
T Consensus 76 ~~~~~leyAV~~L~v~~IvV~GHt~CG~V~Aal~ 109 (220)
T PRK10437 76 NCLSVVQYAVDVLEVEHIIICGHYGCGGVQAAVE 109 (220)
T ss_pred chHHHHHHHHHHcCCCEEEEeCCCCchHHHHHHc
Confidence 4577788888777899999999998777776554
No 330
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=23.37 E-value=3e+02 Score=23.75 Aligned_cols=74 Identities=15% Similarity=0.180 Sum_probs=40.3
Q ss_pred EEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCC--CcCCCcchhhHHHHHHHHHHhcCCCCcEEEEEEchh
Q 016885 69 VVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGD--YVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMG 146 (381)
Q Consensus 69 vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~--~~~~~~~~~~d~~~~i~~l~~~~~~~~i~l~G~S~G 146 (381)
++++-|.++... ..+++.|+++|+.|+..+.......... .......+.+++.++++.+.+..+ ++-++=|..|
T Consensus 11 ~vlItG~s~gIG--~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g--~id~li~~Ag 86 (266)
T PRK06171 11 IIIVTGGSSGIG--LAIVKELLANGANVVNADIHGGDGQHENYQFVPTDVSSAEEVNHTVAEIIEKFG--RIDGLVNNAG 86 (266)
T ss_pred EEEEeCCCChHH--HHHHHHHHHCCCEEEEEeCCccccccCceEEEEccCCCHHHHHHHHHHHHHHcC--CCCEEEECCc
Confidence 345556554333 5678889999999999886543211110 011122234567777777765432 3434444444
No 331
>COG0400 Predicted esterase [General function prediction only]
Probab=23.10 E-value=3e+02 Score=23.27 Aligned_cols=59 Identities=20% Similarity=0.188 Sum_probs=41.6
Q ss_pred CCCCcEEEEeCCCCCCh---hcHHHHHHHhccCCcEEEEeCCC-CCCCCCCCCcCCCcchhhHHHHHHHHHHhc
Q 016885 63 DTPLPCVVYCHGNSGCR---ADANEAAVILLPSNITLFTLDFS-GSGLSDGDYVSLGWHEKDDLKVVVSYLRGN 132 (381)
Q Consensus 63 ~~~~p~vv~~HG~~~~~---~~~~~~~~~l~~~G~~vi~~D~~-G~G~S~~~~~~~~~~~~~d~~~~i~~l~~~ 132 (381)
..+...|+++||.-... .....+.+.|.+.|..|-.-++. ||.-. .+++.++.+|+.+.
T Consensus 143 ~~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~~GH~i~-----------~e~~~~~~~wl~~~ 205 (207)
T COG0400 143 DLAGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHEGGHEIP-----------PEELEAARSWLANT 205 (207)
T ss_pred ccCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEecCCCcCC-----------HHHHHHHHHHHHhc
Confidence 45678999999998653 33456778888899999988886 44322 26677777777653
No 332
>cd01521 RHOD_PspE2 Member of the Rhodanese Homology Domain superfamily. This CD includes the putative rhodanese-like protein, Psp2, of Yersinia pestis biovar Medievalis and other similar uncharacterized proteins.
Probab=22.89 E-value=1.8e+02 Score=21.29 Aligned_cols=34 Identities=26% Similarity=0.343 Sum_probs=21.1
Q ss_pred CCCcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEe
Q 016885 64 TPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTL 99 (381)
Q Consensus 64 ~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~ 99 (381)
...++||++.+.... .....+..|...||.|..+
T Consensus 63 ~~~~vvvyc~~g~~~--~s~~~a~~l~~~G~~v~~l 96 (110)
T cd01521 63 KEKLFVVYCDGPGCN--GATKAALKLAELGFPVKEM 96 (110)
T ss_pred CCCeEEEEECCCCCc--hHHHHHHHHHHcCCeEEEe
Confidence 456888888765321 1234556677789986544
No 333
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=22.80 E-value=1.4e+02 Score=27.87 Aligned_cols=37 Identities=14% Similarity=0.133 Sum_probs=28.5
Q ss_pred EEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCC
Q 016885 69 VVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLS 107 (381)
Q Consensus 69 vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S 107 (381)
|||+|+..- ..|..+++.|+++|+.|..+-..+.+..
T Consensus 2 il~~~~~~p--~~~~~la~~L~~~G~~v~~~~~~~~~~~ 38 (396)
T cd03818 2 ILFVHQNFP--GQFRHLAPALAAQGHEVVFLTEPNAAPP 38 (396)
T ss_pred EEEECCCCc--hhHHHHHHHHHHCCCEEEEEecCCCCCC
Confidence 788887754 3478899999999999988877665443
No 334
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=22.46 E-value=2.2e+02 Score=28.81 Aligned_cols=67 Identities=15% Similarity=0.151 Sum_probs=42.9
Q ss_pred CCCCcEEEEeCCCCCCh---hcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchhhHHHHHHHHHHhcC
Q 016885 63 DTPLPCVVYCHGNSGCR---ADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNK 133 (381)
Q Consensus 63 ~~~~p~vv~~HG~~~~~---~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~i~~l~~~~ 133 (381)
..-+..++++||..... ++...+...|..+|..|-..-+|+.|..-..+. ....-+..+++|+.+..
T Consensus 548 ~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~~----~~~~~~~~~~~~~~~~~ 617 (620)
T COG1506 548 DNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRPE----NRVKVLKEILDWFKRHL 617 (620)
T ss_pred cccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCch----hHHHHHHHHHHHHHHHh
Confidence 34567889999998543 334566778888888877777775443322211 22456777888887653
No 335
>PLN03050 pyridoxine (pyridoxamine) 5'-phosphate oxidase; Provisional
Probab=22.30 E-value=1.3e+02 Score=26.31 Aligned_cols=34 Identities=21% Similarity=0.083 Sum_probs=26.5
Q ss_pred cEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeC
Q 016885 67 PCVVYCHGNSGCRADANEAAVILLPSNITLFTLD 100 (381)
Q Consensus 67 p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D 100 (381)
..|+++-|-|.+..+-.-.++.|.++||.|.++-
T Consensus 61 ~~V~VlcG~GNNGGDGlv~AR~L~~~G~~V~v~~ 94 (246)
T PLN03050 61 PRVLLVCGPGNNGGDGLVAARHLAHFGYEVTVCY 94 (246)
T ss_pred CeEEEEECCCCCchhHHHHHHHHHHCCCeEEEEE
Confidence 3566777777777776778899999999988765
No 336
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=21.76 E-value=2.4e+02 Score=22.69 Aligned_cols=45 Identities=27% Similarity=0.276 Sum_probs=23.9
Q ss_pred HHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhhccCCC-ccEEEeccC
Q 016885 122 LKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSA 168 (381)
Q Consensus 122 ~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~-v~~vi~~~~ 168 (381)
+.+.++.++. ...+|+++|-|..|.+-+.++...++ +..++=.+|
T Consensus 57 l~~~L~~~~~--~gk~I~~yGA~~kg~tlln~~g~~~~~I~~vvD~np 102 (160)
T PF08484_consen 57 LREFLEKLKA--EGKRIAGYGAGAKGNTLLNYFGLDNDLIDYVVDDNP 102 (160)
T ss_dssp HHHHHHHHHH--TT--EEEE---SHHHHHHHHHT--TTTS--EEES-G
T ss_pred HHHHHHHHHH--cCCEEEEECcchHHHHHHHHhCCCcceeEEEEeCCh
Confidence 3334443433 23789999999999999999887666 777775554
No 337
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=21.56 E-value=71 Score=23.78 Aligned_cols=31 Identities=19% Similarity=0.260 Sum_probs=23.6
Q ss_pred EEEeCCCCCChhcHHHHHHHhccC-CcEEEEeCC
Q 016885 69 VVYCHGNSGCRADANEAAVILLPS-NITLFTLDF 101 (381)
Q Consensus 69 vv~~HG~~~~~~~~~~~~~~l~~~-G~~vi~~D~ 101 (381)
||++.|..|+..+ .+++.|+++ |+.++..|-
T Consensus 1 vI~I~G~~gsGKS--T~a~~La~~~~~~~i~~d~ 32 (121)
T PF13207_consen 1 VIIISGPPGSGKS--TLAKELAERLGFPVISMDD 32 (121)
T ss_dssp EEEEEESTTSSHH--HHHHHHHHHHTCEEEEEHH
T ss_pred CEEEECCCCCCHH--HHHHHHHHHHCCeEEEecc
Confidence 5778888887763 456677775 999998887
No 338
>PRK07856 short chain dehydrogenase; Provisional
Probab=21.52 E-value=2.8e+02 Score=23.80 Aligned_cols=73 Identities=15% Similarity=0.218 Sum_probs=37.3
Q ss_pred EEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCCCCCC---CcCCCcchhhHHHHHHHHHHhcCCCCcEEEEEEchh
Q 016885 70 VYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGD---YVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMG 146 (381)
Q Consensus 70 v~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~---~~~~~~~~~~d~~~~i~~l~~~~~~~~i~l~G~S~G 146 (381)
+++-|.++... ..+++.|+++|+.|+..+...-....+. .......+.+++.++++.+.+.. .++-++=|+.|
T Consensus 9 ~lItGas~gIG--~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~~id~vi~~ag 84 (252)
T PRK07856 9 VLVTGGTRGIG--AGIARAFLAAGATVVVCGRRAPETVDGRPAEFHAADVRDPDQVAALVDAIVERH--GRLDVLVNNAG 84 (252)
T ss_pred EEEeCCCchHH--HHHHHHHHHCCCEEEEEeCChhhhhcCCceEEEEccCCCHHHHHHHHHHHHHHc--CCCCEEEECCC
Confidence 44455544333 5678888899999998876431100010 11111222455666666665543 23444445544
No 339
>PRK06091 membrane protein FdrA; Validated
Probab=21.30 E-value=4.5e+02 Score=26.09 Aligned_cols=38 Identities=11% Similarity=0.187 Sum_probs=27.3
Q ss_pred CcEEEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCCCCCC
Q 016885 66 LPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGL 106 (381)
Q Consensus 66 ~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~G~G~ 106 (381)
..++|+..|++ ...-..+.+...+.|..++.||. |.+.
T Consensus 142 ~~viI~S~gfg--~~~E~~L~e~Ar~~GlrvmGPNC-G~~~ 179 (555)
T PRK06091 142 LNVMMFSDNVT--LEDEIRLKTRAREKGLLVMGPDC-GTAM 179 (555)
T ss_pred CeEEEEcCCCC--HHHHHHHHHHHHHcCCEEECCCC-hhhh
Confidence 56888888884 33335566666678999999999 6554
No 340
>KOG0635 consensus Adenosine 5'-phosphosulfate kinase [Inorganic ion transport and metabolism]
Probab=20.76 E-value=1.8e+02 Score=23.38 Aligned_cols=38 Identities=24% Similarity=0.319 Sum_probs=29.2
Q ss_pred CCCcEEEEeCCCCCChhcH--HHHHHHhccCCcEEEEeCC
Q 016885 64 TPLPCVVYCHGNSGCRADA--NEAAVILLPSNITLFTLDF 101 (381)
Q Consensus 64 ~~~p~vv~~HG~~~~~~~~--~~~~~~l~~~G~~vi~~D~ 101 (381)
+.+.++|++-|+.++..+. ..+-+.|.++|-..+..|-
T Consensus 28 ~qkGcviWiTGLSgSGKStlACaL~q~L~qrgkl~Y~LDG 67 (207)
T KOG0635|consen 28 KQKGCVIWITGLSGSGKSTLACALSQALLQRGKLTYILDG 67 (207)
T ss_pred cCCCcEEEEeccCCCCchhHHHHHHHHHHhcCceEEEecC
Confidence 4568999999999887654 3456788899987777763
No 341
>PRK12613 galactose-6-phosphate isomerase subunit LacA; Provisional
Probab=20.60 E-value=3.6e+02 Score=21.25 Aligned_cols=72 Identities=8% Similarity=0.058 Sum_probs=38.8
Q ss_pred HHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchhhHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhhccCCCccE
Q 016885 83 NEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAG 162 (381)
Q Consensus 83 ~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~v~~ 162 (381)
..+..+|.+.||.|+ |+ |. .+ ..+ .+-...+.+.+.+.....-|.+.|.-.|-.++ |.+.+.|++
T Consensus 16 ~~l~~~L~~~g~eV~--D~-G~-~~------~dy--pd~a~~va~~V~~~e~~~GIliCGtGiG~sia---ANKv~GIRa 80 (141)
T PRK12613 16 ELIKSFLQEEGYDII--DV-TD-IN------SDF--IDNTLAVAKAVNEAEGRLGIMVDAYGAGPFMV---ATKLKGMVA 80 (141)
T ss_pred HHHHHHHHHCCCEEE--Ec-CC-CC------CCh--HHHHHHHHHHHHcCCCceEEEEcCCCHhHhhh---hhcCCCeEE
Confidence 356778888999875 43 32 11 111 22233444455443322456677766664443 566677777
Q ss_pred EEeccCc
Q 016885 163 MVLDSAF 169 (381)
Q Consensus 163 vi~~~~~ 169 (381)
.....+.
T Consensus 81 A~~~d~~ 87 (141)
T PRK12613 81 AEVSDER 87 (141)
T ss_pred EEECCHH
Confidence 7765443
No 342
>PRK08621 galactose-6-phosphate isomerase subunit LacA; Reviewed
Probab=20.55 E-value=3.4e+02 Score=21.44 Aligned_cols=72 Identities=8% Similarity=0.016 Sum_probs=39.3
Q ss_pred HHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchhhHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhhccCCCccE
Q 016885 83 NEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAG 162 (381)
Q Consensus 83 ~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~v~~ 162 (381)
..+.++|.+.||.|+ |+ |... . ..+ .+-...+.+.+.+.....-|.+.|.-.|-.++ |.+.+.|++
T Consensus 16 ~~l~~~L~~~G~eV~--D~-G~~~----~--~dY--pd~a~~va~~V~~~~~~~GIliCGTGiG~sia---ANK~~GIRA 81 (142)
T PRK08621 16 EVVKDYLEDNKYEVV--DV-TEEG----A--EDF--VDSTLAVAKEVNKSEDNLGIVIDAYGAGSFMV---ATKIKGMVA 81 (142)
T ss_pred HHHHHHHHHCCCEEE--EC-CCCC----C--CCc--HHHHHHHHHHHHcCCCceEEEEcCCChhhhhh---hhcCCCeEE
Confidence 356778888999886 54 3211 1 112 12334444555444333456677666664443 566677777
Q ss_pred EEeccC
Q 016885 163 MVLDSA 168 (381)
Q Consensus 163 vi~~~~ 168 (381)
....+.
T Consensus 82 A~~~d~ 87 (142)
T PRK08621 82 AEVSDE 87 (142)
T ss_pred EEECCH
Confidence 776443
No 343
>PRK06523 short chain dehydrogenase; Provisional
Probab=20.26 E-value=4.3e+02 Score=22.61 Aligned_cols=32 Identities=16% Similarity=0.098 Sum_probs=22.6
Q ss_pred EEEeCCCCCChhcHHHHHHHhccCCcEEEEeCCC
Q 016885 69 VVYCHGNSGCRADANEAAVILLPSNITLFTLDFS 102 (381)
Q Consensus 69 vv~~HG~~~~~~~~~~~~~~l~~~G~~vi~~D~~ 102 (381)
.+++.|..+... ..+++.|+++|+.|+..+..
T Consensus 11 ~vlItGas~gIG--~~ia~~l~~~G~~v~~~~r~ 42 (260)
T PRK06523 11 RALVTGGTKGIG--AATVARLLEAGARVVTTARS 42 (260)
T ss_pred EEEEECCCCchh--HHHHHHHHHCCCEEEEEeCC
Confidence 455556554333 56788899999999988764
No 344
>TIGR03708 poly_P_AMP_trns polyphosphate:AMP phosphotransferase. Members of this protein family contain a domain duplication. The characterized member from Acinetobacter johnsonii is polyphosphate:AMP phosphotransferase (PAP), which can transfer the terminal phosphate from poly(P) to AMP, yielding ADP. In the opposite direction, this enzyme can synthesize poly(P). Each domain of this protein family is homologous to polyphosphate kinase, an enzyme that can run in the forward direction to extend a polyphosphate chain with a new terminal phosphate from ATP, or in reverse to make ATP (or GTP) from ADP (or GDP).
Probab=20.13 E-value=3.3e+02 Score=26.68 Aligned_cols=69 Identities=12% Similarity=0.122 Sum_probs=49.5
Q ss_pred CCCcEEEEeCCCCCCh--hcHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchhhHH-HHHHHHHHhcCCCCcEEE
Q 016885 64 TPLPCVVYCHGNSGCR--ADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDL-KVVVSYLRGNKQTSRIGL 140 (381)
Q Consensus 64 ~~~p~vv~~HG~~~~~--~~~~~~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~-~~~i~~l~~~~~~~~i~l 140 (381)
...|+||++.|+.+.. .....+...|-.+||.|.++--|.-- +.. .-+-.+....+..+.|+|
T Consensus 296 ~~~~vlivfeG~DaAGKgg~I~rl~~~ldPrg~~v~~~~~Pt~~--------------E~~~~~lwRf~~~lP~~G~i~i 361 (493)
T TIGR03708 296 RKRSLVLVFEGWDAAGKGGAIRRVTEALDARQYRVVPIAAPTDE--------------EKAQHYLWRFWRHIPRRGRITI 361 (493)
T ss_pred CCCCEEEEEEcccCCCCcHHHHHHHhhcCCCeeEEEeCCCcCHH--------------HHcCcHHHHHHHhCCCCCeEEE
Confidence 5679999999998554 34678888999999999998877210 111 113456666666799999
Q ss_pred EEEchh
Q 016885 141 WGRSMG 146 (381)
Q Consensus 141 ~G~S~G 146 (381)
+=.|+=
T Consensus 362 FdRSwY 367 (493)
T TIGR03708 362 FDRSWY 367 (493)
T ss_pred EcCCcc
Confidence 988863
No 345
>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=20.04 E-value=6.2e+02 Score=22.45 Aligned_cols=63 Identities=11% Similarity=0.129 Sum_probs=35.8
Q ss_pred CcEEEEeCCCCCCCCCCCCcCCCcchhhHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHhhccCCC--ccEEEe
Q 016885 93 NITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS--IAGMVL 165 (381)
Q Consensus 93 G~~vi~~D~~G~G~S~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~--v~~vi~ 165 (381)
++.++.+|.+|..... ...+.++.+.+........+.++.-++++.-+...+..+.. +.++|+
T Consensus 154 ~~D~ViIDt~Gr~~~~----------~~~l~el~~~~~~~~~~~~~LVl~a~~~~~d~~~~~~~f~~~~~~~~I~ 218 (270)
T PRK06731 154 RVDYILIDTAGKNYRA----------SETVEEMIETMGQVEPDYICLTLSASMKSKDMIEIITNFKDIHIDGIVF 218 (270)
T ss_pred CCCEEEEECCCCCcCC----------HHHHHHHHHHHhhhCCCeEEEEEcCccCHHHHHHHHHHhCCCCCCEEEE
Confidence 6888888888764321 13334444433322222334445556777777776666554 788886
No 346
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=20.03 E-value=1.5e+02 Score=26.09 Aligned_cols=35 Identities=17% Similarity=0.042 Sum_probs=24.9
Q ss_pred HHHHHHHHhcCCCC-cEEEEEEchhHHHHHHhhccCC
Q 016885 123 KVVVSYLRGNKQTS-RIGLWGRSMGAVTSLLYGAEDP 158 (381)
Q Consensus 123 ~~~i~~l~~~~~~~-~i~l~G~S~GG~~a~~~a~~~p 158 (381)
.-+++.+.+. +.. -=.++|.|.|+.++..++....
T Consensus 14 ~Gvl~al~e~-~~~~fd~i~GtSaGAi~a~~~~~g~~ 49 (266)
T cd07208 14 AGVLDAFLEA-GIRPFDLVIGVSAGALNAASYLSGQR 49 (266)
T ss_pred HHHHHHHHHc-CCCCCCEEEEECHHHHhHHHHHhCCc
Confidence 3455666655 233 3379999999999999887654
Done!