Query 016888
Match_columns 381
No_of_seqs 157 out of 765
Neff 4.5
Searched_HMMs 29240
Date Mon Mar 25 05:27:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016888.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016888hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3v7d_A Suppressor of kinetocho 100.0 1.2E-44 4.1E-49 325.1 14.4 149 11-160 2-162 (169)
2 2p1m_A SKP1-like protein 1A; F 100.0 4.5E-42 1.6E-46 304.9 3.0 142 14-160 2-154 (160)
3 2ast_A S-phase kinase-associat 100.0 4.2E-40 1.5E-44 291.0 13.1 143 17-160 2-155 (159)
4 1fs1_B SKP1, cyclin A/CDK2-ass 100.0 8.4E-40 2.9E-44 285.0 11.5 129 17-151 3-141 (141)
5 1hv2_A Elongin C, ELC1; protei 99.9 9.8E-25 3.4E-29 180.3 4.8 96 13-116 1-99 (99)
6 2fnj_C Transcription elongatio 99.9 1.8E-24 6.3E-29 177.6 4.8 94 17-116 2-96 (96)
7 1vcb_B Protein (elongin C); tu 99.9 3.2E-24 1.1E-28 181.4 5.7 96 15-116 16-112 (112)
8 4ajy_C Transcription elongatio 99.8 1.2E-21 4.2E-26 160.1 5.7 94 17-116 3-97 (97)
9 2vkp_A BTB/POZ domain-containi 98.2 4.9E-06 1.7E-10 66.7 9.3 97 15-130 8-108 (109)
10 2yy9_A Zinc finger and BTB dom 98.1 2E-06 7E-11 72.6 5.3 99 16-137 26-125 (135)
11 3htm_A Speckle-type POZ protei 98.0 3.6E-05 1.2E-09 66.0 10.3 105 16-139 35-140 (172)
12 1buo_A POZ domain, protein (pr 98.0 3.1E-05 1.1E-09 63.7 9.2 92 16-131 29-121 (121)
13 2if5_A Zinc finger and BTB dom 97.9 6.1E-05 2.1E-09 61.5 10.4 94 15-127 25-119 (120)
14 1r29_A B-cell lymphoma 6 prote 97.9 7.3E-05 2.5E-09 61.7 10.3 94 15-128 29-124 (127)
15 2vpk_A Myoneurin; transcriptio 97.8 0.00012 4.2E-09 59.4 10.3 92 16-128 23-115 (116)
16 4eoz_A Speckle-type POZ protei 97.8 2.2E-05 7.6E-10 65.4 5.4 102 16-136 26-128 (145)
17 2q81_A MIZ-1 protein; BTB/POZ 97.8 0.00011 3.8E-09 60.3 9.2 89 16-128 28-117 (119)
18 2ppi_A Gigaxonin; BTB domain, 97.8 7E-05 2.4E-09 64.0 8.1 94 16-127 48-143 (144)
19 3b84_A Zinc finger and BTB dom 97.7 6.8E-05 2.3E-09 61.6 7.4 90 16-128 25-115 (119)
20 3ga1_A Nucleus accumbens-assoc 97.7 4.4E-05 1.5E-09 63.5 5.7 92 16-129 34-126 (129)
21 2z8h_A Transcription regulator 97.6 0.00011 3.9E-09 61.8 7.4 96 16-131 37-133 (138)
22 3hve_A Gigaxonin; ubiquitin, c 97.5 0.00017 6E-09 66.2 7.5 107 15-139 31-139 (256)
23 3hqi_A Speckle-type POZ protei 97.5 0.0004 1.4E-08 65.4 9.5 105 16-139 175-280 (312)
24 3i3n_A Kelch-like protein 11; 97.4 0.00016 5.5E-09 67.3 6.0 108 16-140 33-148 (279)
25 3ohu_A Transcription regulator 97.3 6.5E-05 2.2E-09 61.9 2.0 90 16-125 33-123 (125)
26 3m5b_A Zinc finger and BTB dom 97.3 0.00024 8.1E-09 59.1 4.9 86 16-129 31-117 (119)
27 2ihc_A Transcription regulator 97.1 0.00023 7.8E-09 58.9 2.7 92 16-127 30-122 (124)
28 3fkc_A Transcriptional regulat 97.0 0.0013 4.4E-08 54.0 7.0 83 16-121 32-115 (116)
29 3drz_A BTB/POZ domain-containi 80.5 4.5 0.00016 32.8 6.9 95 16-128 6-105 (107)
30 3drx_A BTB/POZ domain-containi 43.9 26 0.00089 32.2 4.9 102 11-130 7-113 (202)
31 1s1g_A Potassium voltage-gated 27.3 49 0.0017 27.7 3.6 90 17-126 14-107 (124)
32 2k9n_A MYB24; R2R3 domain, DNA 21.6 47 0.0016 26.5 2.3 36 124-159 24-66 (107)
No 1
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=100.00 E-value=1.2e-44 Score=325.13 Aligned_cols=149 Identities=26% Similarity=0.471 Sum_probs=129.8
Q ss_pred CCCCCccEEEEeCCCCEEEecHHHHHHcHHHHHHHhhcCCCC---CCCcccccCCCCCHHHHHHHHHHHHhcCCCCC---
Q 016888 11 PEMMKSYIWLQTADGSIQQVEQEVAMFCPLICQEVIQKGMGS---SKNYAISLPQRVNPAMLSLILDYCRFHQVPGS--- 84 (381)
Q Consensus 11 Pe~~s~~IkL~SsDG~iFeVs~eaA~qS~tIr~mL~d~g~~~---~e~~~IPLP~nVss~iLkkIIEYCehHk~~~~--- 84 (381)
|.|++++|+|+|+||++|.|+.++|++|++|++||.+.|... +...+|||| +|++.+|++|++||+||+.+++
T Consensus 2 ~~m~~~~i~L~SsDG~~F~V~~~vA~~S~tIk~ml~~~~~~~~~~~~~~~Iplp-nV~s~iL~kVieyc~~h~~~~~~~~ 80 (169)
T 3v7d_A 2 AHMVTSNVVLVSGEGERFTVDKKIAERSLLLKNYLNDMGDDDDEDDDEIVMPVP-NVRSSVLQKVIEWAEHHRDSNFPDE 80 (169)
T ss_dssp ----CCEEEEECTTCCEEEEEHHHHTTSHHHHHHHHC-----------CEEECT-TCCHHHHHHHHHHHHHTTTCCCCC-
T ss_pred CCCCCCeEEEEeCCCCEEEecHHHHHHhHHHHHHHHhcCcccccccCCCceeeC-CCCHHHHHHHHHHHHHcccCCCccc
Confidence 457778999999999999999999999999999998776421 123789999 8999999999999999998642
Q ss_pred ------CcccchhhhhhhccCChHHHHHHHhhcccCCCchHHHHHHHHHHHHHhCCCHHHHHhHcCCCCCCChHhhhccc
Q 016888 85 ------SNKERKSFDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIREIFHLPDDLTEEEKLEPL 158 (381)
Q Consensus 85 ------s~~ei~eWD~eFLkiD~~~LfeLI~AAnYLdIk~LldL~ck~VA~~IkGKTpEEIRe~FgI~nD~TpEEEeEi~ 158 (381)
....+++||++|+++|..+||+||.|||||+|++|+++||++||++|+||||+|||++|||++||||||+++++
T Consensus 81 ~~~~~~~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~Lldl~c~~vA~~ikgktpeeiR~~f~I~nd~t~eEe~~ir 160 (169)
T 3v7d_A 81 DDDDSRKSAPVDSWDREFLKVDQEMLYEIILAANYLNIKPLLDAGCKVVAEMIRGRSPEEIRRTFNIVNDFTPEEEAAIR 160 (169)
T ss_dssp -------CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCHHHHHHHHTCCCCCCHHHHHHHH
T ss_pred ccccccccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCCHHHHHHHH
Confidence 23568999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cc
Q 016888 159 KN 160 (381)
Q Consensus 159 k~ 160 (381)
++
T Consensus 161 ~e 162 (169)
T 3v7d_A 161 RE 162 (169)
T ss_dssp TT
T ss_pred Hh
Confidence 75
No 2
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=100.00 E-value=4.5e-42 Score=304.90 Aligned_cols=142 Identities=35% Similarity=0.572 Sum_probs=82.6
Q ss_pred CCccEEEEeCCCCEEEecHHHHHHcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhcCCCC----------
Q 016888 14 MKSYIWLQTADGSIQQVEQEVAMFCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPG---------- 83 (381)
Q Consensus 14 ~s~~IkL~SsDG~iFeVs~eaA~qS~tIr~mL~d~g~~~~e~~~IPLP~nVss~iLkkIIEYCehHk~~~---------- 83 (381)
.+++|+|+|+||+.|.|+..+|++|++|++|+.+.+ ...+|||| +|++.+|++|++||.||+.++
T Consensus 2 ~~~~v~L~SsDg~~f~v~~~vA~~S~~ik~ml~~~~----~~~~Ipl~-~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~ 76 (160)
T 2p1m_A 2 SAKKIVLKSSDGESFEVEEAVALESQTIAHMVEDDC----VDNGVPLP-NVTSKILAKVIEYCKRHVEAAASKAEAVEGA 76 (160)
T ss_dssp ------CCC---------CHHHHTCTTTC----------------CCT-TSCHHHHHHHHHC------------------
T ss_pred CCCEEEEEcCCCCEEEECHHHHHHhHHHHHHHHccC----CCCceeCC-cCcHHHHHHHHHHHHHcccCCCccccccccc
Confidence 356899999999999999999999999999997654 24589999 899999999999999999753
Q ss_pred -CCcccchhhhhhhccCChHHHHHHHhhcccCCCchHHHHHHHHHHHHHhCCCHHHHHhHcCCCCCCChHhhhccccc
Q 016888 84 -SSNKERKSFDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIREIFHLPDDLTEEEKLEPLKN 160 (381)
Q Consensus 84 -~s~~ei~eWD~eFLkiD~~~LfeLI~AAnYLdIk~LldL~ck~VA~~IkGKTpEEIRe~FgI~nD~TpEEEeEi~k~ 160 (381)
.....+++||++|++++..+||+||.||+||+|++|+++||++||++|+||||+|||++|||++||||||+++++++
T Consensus 77 ~~~~~~i~~wD~~Fl~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~eeir~~f~I~nd~t~eEe~~ir~e 154 (160)
T 2p1m_A 77 ATSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKNDFTPEEEEEVRRE 154 (160)
T ss_dssp ------------------------CHHHHHHTTCHHHHHHHHHHHHHTTTTCCHHHHHHHTTCCCCCCHHHHHHHHHH
T ss_pred ccccchhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCCHHHHHHHHHh
Confidence 13356889999999999999999999999999999999999999999999999999999999999999999998875
No 3
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=100.00 E-value=4.2e-40 Score=291.04 Aligned_cols=143 Identities=35% Similarity=0.571 Sum_probs=128.3
Q ss_pred cEEEEeCCCCEEEecHHHHHHcHHHHHHHhhcCCC-CCCCcccccCCCCCHHHHHHHHHHHHhcCCCCC----------C
Q 016888 17 YIWLQTADGSIQQVEQEVAMFCPLICQEVIQKGMG-SSKNYAISLPQRVNPAMLSLILDYCRFHQVPGS----------S 85 (381)
Q Consensus 17 ~IkL~SsDG~iFeVs~eaA~qS~tIr~mL~d~g~~-~~e~~~IPLP~nVss~iLkkIIEYCehHk~~~~----------s 85 (381)
.|+|+|+||+.|.|++.+|.+|++|++|+.+.|+. .+...+|||| +|++.+|++|++||.||+.+++ .
T Consensus 2 ~v~L~ssDg~~f~v~~~vA~~S~~i~~m~~~~~~~~e~~~~~Ipl~-~V~~~iL~kViey~~~h~~~~~~~~~~~~~~~~ 80 (159)
T 2ast_A 2 SIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLP-NVNAAILKKVIQWCTHHKDDPPPPEDDENKEKR 80 (159)
T ss_dssp EEEEECTTSCEEEEEHHHHHTCHHHHHHTTSSCSS------CEECT-TSCHHHHHHHHHHHHHTTTCCC-----------
T ss_pred eEEEEcCCCCEEEeCHHHHHHhHHHHHHHHhcCCcccccCCCcCCC-CccHHHHHHHHHHHHHcCcCCCCcccccccccc
Confidence 49999999999999999999999999998875554 3345789999 8999999999999999997542 2
Q ss_pred cccchhhhhhhccCChHHHHHHHhhcccCCCchHHHHHHHHHHHHHhCCCHHHHHhHcCCCCCCChHhhhccccc
Q 016888 86 NKERKSFDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIREIFHLPDDLTEEEKLEPLKN 160 (381)
Q Consensus 86 ~~ei~eWD~eFLkiD~~~LfeLI~AAnYLdIk~LldL~ck~VA~~IkGKTpEEIRe~FgI~nD~TpEEEeEi~k~ 160 (381)
...+++||++|++++...||+||.||+||+|++|+++||++||++|+||||+|||++|||++||||||+++++++
T Consensus 81 ~~~i~~wD~~F~~id~~~l~eLl~AAnyL~I~~Lld~~c~~va~~i~gkt~eeir~~f~I~~d~t~eEe~~ir~e 155 (159)
T 2ast_A 81 TDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKE 155 (159)
T ss_dssp CCCCCHHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSSCCHHHHHHHTTCCCCSCTTHHHHHHHH
T ss_pred hhhhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCCHHHHHHHHHh
Confidence 357899999999999999999999999999999999999999999999999999999999999999999998875
No 4
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=100.00 E-value=8.4e-40 Score=284.96 Aligned_cols=129 Identities=36% Similarity=0.584 Sum_probs=110.0
Q ss_pred cEEEEeCCCCEEEecHHHHHHcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCC----------Cc
Q 016888 17 YIWLQTADGSIQQVEQEVAMFCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGS----------SN 86 (381)
Q Consensus 17 ~IkL~SsDG~iFeVs~eaA~qS~tIr~mL~d~g~~~~e~~~IPLP~nVss~iLkkIIEYCehHk~~~~----------s~ 86 (381)
.|+|+|+||++|.|++.+|.+|++|++|+.+.| ..+|||| +|++.+|++|++||+||+.+++ ..
T Consensus 3 ~v~L~SsDg~~f~v~~~vA~~S~~ik~ml~~~~-----~~~Ipl~-~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~ 76 (141)
T 1fs1_B 3 SIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLG-----MDPVPLP-NVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT 76 (141)
T ss_dssp EEEEECTTSCEEEEEGGGGGTCHHHHHHHHHTC-----CSSEECT-TCCHHHHHHHHHHHHHHTTCC-------------
T ss_pred eEEEEeCCCCEEEecHHHHHHhHHHHHHHHhcC-----CCceecC-CcCHHHHHHHHHHHHHhccCCCccccccccccch
Confidence 599999999999999999999999999998764 4589999 8999999999999999997542 24
Q ss_pred ccchhhhhhhccCChHHHHHHHhhcccCCCchHHHHHHHHHHHHHhCCCHHHHHhHcCCCCCCCh
Q 016888 87 KERKSFDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIREIFHLPDDLTE 151 (381)
Q Consensus 87 ~ei~eWD~eFLkiD~~~LfeLI~AAnYLdIk~LldL~ck~VA~~IkGKTpEEIRe~FgI~nD~Tp 151 (381)
..+++||++|++++..+||+||.|||||+|++|+++||++||++|+||||+|||++|||++||||
T Consensus 77 ~~i~~wD~~F~~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~eeiR~~f~I~~d~tp 141 (141)
T 1fs1_B 77 DDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTE 141 (141)
T ss_dssp ----HHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCHHHHHHHTC-------
T ss_pred hhhhHHHHHHHhCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCCC
Confidence 56889999999999999999999999999999999999999999999999999999999999997
No 5
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=99.90 E-value=9.8e-25 Score=180.32 Aligned_cols=96 Identities=20% Similarity=0.296 Sum_probs=83.4
Q ss_pred CCCccEEEEeCCCCEEEecHHHHHHcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhcCCCC---CCcccc
Q 016888 13 MMKSYIWLQTADGSIQQVEQEVAMFCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPG---SSNKER 89 (381)
Q Consensus 13 ~~s~~IkL~SsDG~iFeVs~eaA~qS~tIr~mL~d~g~~~~e~~~IPLP~nVss~iLkkIIEYCehHk~~~---~s~~ei 89 (381)
|++++|+|+|+||++|.|++++|++|++|++|+.+ |+ .+...+|||| +|++.+|++|++||+||+.++ .....+
T Consensus 1 m~~~~v~L~SsDg~~f~V~~~vA~~S~~ik~ml~~-~~-e~~~~~Iplp-~V~~~iL~kVieyc~~h~~~~~~~~~~~~i 77 (99)
T 1hv2_A 1 MSQDFVTLVSKDDKEYEISRSAAMISPTLKAMIEG-PF-RESKGRIELK-QFDSHILEKAVEYLNYNLKYSGVSEDDDEI 77 (99)
T ss_dssp CCCSEEEEEETTTEEEEEEHHHHTTCHHHHHHHHS-ST-TTCTTEEEET-TSCHHHHHHHHHHHHHHHHHHHHCSSCSSC
T ss_pred CCCcEEEEEecCCCEEEECHHHHHHhHHHHHHHhc-cc-ccCCCceecC-CcCHHHHHHHHHHHHHhcccCCCccccccC
Confidence 45679999999999999999999999999999987 54 3345789999 899999999999999999643 223567
Q ss_pred hhhhhhhccCChHHHHHHHhhcccCCC
Q 016888 90 KSFDEKFIRMDTKRLCELTSAADSLQL 116 (381)
Q Consensus 90 ~eWD~eFLkiD~~~LfeLI~AAnYLdI 116 (381)
++| ++|+.+||+||.|||||+|
T Consensus 78 ~~w-----~vd~~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 78 PEF-----EIPTEMSLELLLAADYLSI 99 (99)
T ss_dssp CCC-----CCCHHHHHHHHHHHHHHCC
T ss_pred CCc-----cCCHHHHHHHHHHHHHhCc
Confidence 888 7999999999999999997
No 6
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=99.89 E-value=1.8e-24 Score=177.60 Aligned_cols=94 Identities=21% Similarity=0.240 Sum_probs=80.3
Q ss_pred cEEEEeCCCCEEEecHHHHHHcHHHHHHHhhcCC-CCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCcccchhhhhh
Q 016888 17 YIWLQTADGSIQQVEQEVAMFCPLICQEVIQKGM-GSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDEK 95 (381)
Q Consensus 17 ~IkL~SsDG~iFeVs~eaA~qS~tIr~mL~d~g~-~~~e~~~IPLP~nVss~iLkkIIEYCehHk~~~~s~~ei~eWD~e 95 (381)
+|+|+|+||++|.|++++|++|++|++|+.+.|. .++...+|||| +|++.+|++|++||+||+.++.+..++++|
T Consensus 2 ~v~L~SsDg~~f~V~~~~A~~S~~ik~ml~~~~~~~e~~~~~Ipl~-~V~~~iL~kVieyc~~h~~~~~~~~~i~~w--- 77 (96)
T 2fnj_C 2 YVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFR-EIPSHVLSKVCMYFTYKVRYTNSSTEIPEF--- 77 (96)
T ss_dssp EEEEECTTSCEEEEEHHHHTTSHHHHHHHHCC--------CEEECS-SCCHHHHHHHHHHHHHHHHHHSCCSCCCCC---
T ss_pred eEEEEecCCCEEEeCHHHHHHhHHHHHHHHccCCcccccCCceeCC-CCCHHHHHHHHHHHHHccccCCCcccCCCc---
Confidence 7999999999999999999999999999987654 23334689999 899999999999999999765445678888
Q ss_pred hccCChHHHHHHHhhcccCCC
Q 016888 96 FIRMDTKRLCELTSAADSLQL 116 (381)
Q Consensus 96 FLkiD~~~LfeLI~AAnYLdI 116 (381)
++|+.+||+||.|||||+|
T Consensus 78 --~vd~~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 78 --PIAPEIALELLMAANFLDC 96 (96)
T ss_dssp --CCCTTTHHHHHHHHHHHTC
T ss_pred --ccCHHHHHHHHHHHHHhCc
Confidence 7899999999999999997
No 7
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=99.89 E-value=3.2e-24 Score=181.43 Aligned_cols=96 Identities=21% Similarity=0.228 Sum_probs=81.6
Q ss_pred CccEEEEeCCCCEEEecHHHHHHcHHHHHHHhhcCC-CCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCcccchhhh
Q 016888 15 KSYIWLQTADGSIQQVEQEVAMFCPLICQEVIQKGM-GSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFD 93 (381)
Q Consensus 15 s~~IkL~SsDG~iFeVs~eaA~qS~tIr~mL~d~g~-~~~e~~~IPLP~nVss~iLkkIIEYCehHk~~~~s~~ei~eWD 93 (381)
+++|+|+|+||++|.|++++|++|+||++||.+.+. .+....+|||| +|++.+|++|++||+||+.++.+..++++|
T Consensus 16 ~~~v~L~SsDG~~F~V~~~~A~~S~tIk~ml~~~~~~~e~~~~~Iplp-nV~s~iL~kVieyc~~h~~~~~~~~~i~~w- 93 (112)
T 1vcb_B 16 AMYVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFR-EIPSHVLSKVCMYFTYKVRYTNSSTEIPEF- 93 (112)
T ss_dssp -CEEEEECTTSCEEEEEHHHHHTSHHHHHHSSCC--------CEEECS-SCCHHHHHHHHHHHHHHHHHSSCSSCCCCC-
T ss_pred CCEEEEEcCCCCEEEECHHHHHHhHHHHHHHHhcCCcccccCCceeCC-CCCHHHHHHHHHHHHHhhhccCCcCCCCCc-
Confidence 568999999999999999999999999999987654 22234689999 899999999999999999765555678889
Q ss_pred hhhccCChHHHHHHHhhcccCCC
Q 016888 94 EKFIRMDTKRLCELTSAADSLQL 116 (381)
Q Consensus 94 ~eFLkiD~~~LfeLI~AAnYLdI 116 (381)
++|+.+||+||.|||||+|
T Consensus 94 ----~vd~~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 94 ----PIAPEIALELLMAANFLDC 112 (112)
T ss_dssp ----CCCHHHHHHHHHHHHHHTC
T ss_pred ----ccCHHHHHHHHHHHHHhCc
Confidence 7999999999999999997
No 8
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=99.84 E-value=1.2e-21 Score=160.13 Aligned_cols=94 Identities=21% Similarity=0.240 Sum_probs=80.0
Q ss_pred cEEEEeCCCCEEEecHHHHHHcHHHHHHHhhcCC-CCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCcccchhhhhh
Q 016888 17 YIWLQTADGSIQQVEQEVAMFCPLICQEVIQKGM-GSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDEK 95 (381)
Q Consensus 17 ~IkL~SsDG~iFeVs~eaA~qS~tIr~mL~d~g~-~~~e~~~IPLP~nVss~iLkkIIEYCehHk~~~~s~~ei~eWD~e 95 (381)
+|+|+|+||++|.|++.+|.+|++|++|+.+.|. .++...+|||| +|++.+|++|++||.||+.++.+..++++|
T Consensus 3 ~v~L~SsDg~~F~v~r~vA~~S~~ik~m~~~~~~~~E~~~~~I~l~-~V~~~iL~kViey~~~h~~~~~~~~~i~~~--- 78 (97)
T 4ajy_C 3 YVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFR-EIPSHVLSKVCMYFTYKVRYTNSSTEIPEF--- 78 (97)
T ss_dssp EEEEECTTCCEEEEEHHHHTTSHHHHHHHCCC--------CEEECT-TSCHHHHHHHHHHHHHHHHHTTCCSCCCCC---
T ss_pred EEEEEecCCcEEEecHHHHHHhHHHHHHHHhCCCccccCCCceECC-CCCHHHHHHHHHHHHHhcccCCCcCCCCcC---
Confidence 7999999999999999999999999999986542 22346789999 899999999999999999876555678999
Q ss_pred hccCChHHHHHHHhhcccCCC
Q 016888 96 FIRMDTKRLCELTSAADSLQL 116 (381)
Q Consensus 96 FLkiD~~~LfeLI~AAnYLdI 116 (381)
+++.+.||+||.||+||+.
T Consensus 79 --~i~~~~l~eLl~AAnyL~~ 97 (97)
T 4ajy_C 79 --PIAPEIALELLMAANFLDC 97 (97)
T ss_dssp --CCCGGGHHHHHHHHHHHTC
T ss_pred --cCCHHHHHHHHHHHhhhCC
Confidence 5899999999999999984
No 9
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=98.24 E-value=4.9e-06 Score=66.68 Aligned_cols=97 Identities=13% Similarity=0.166 Sum_probs=77.2
Q ss_pred CccEEEEeCCC---CEEEecHHHHH-HcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCcccch
Q 016888 15 KSYIWLQTADG---SIQQVEQEVAM-FCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERK 90 (381)
Q Consensus 15 s~~IkL~SsDG---~iFeVs~eaA~-qS~tIr~mL~d~g~~~~e~~~IPLP~nVss~iLkkIIEYCehHk~~~~s~~ei~ 90 (381)
-+.|+|+..+| +.|.+.+.++. .|+.++.|+... ..++. ..|.|| ++++.++..+++|+..-...
T Consensus 8 ~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~-~~e~~-~~i~l~-~~~~~~f~~~l~~iYt~~~~-------- 76 (109)
T 2vkp_A 8 MADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGD-LAEVK-SEIHIP-DVEPAAFLILLKYMYSDEID-------- 76 (109)
T ss_dssp TCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC-------C-CEEEET-TSCHHHHHHHHHHHHHCCCC--------
T ss_pred cccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCC-cccCC-CeEEeC-CCCHHHHHHHHHHHcCCCcc--------
Confidence 45789998886 99999999985 799999987643 22223 779998 79999999999999875421
Q ss_pred hhhhhhccCChHHHHHHHhhcccCCCchHHHHHHHHHHHH
Q 016888 91 SFDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARI 130 (381)
Q Consensus 91 eWD~eFLkiD~~~LfeLI~AAnYLdIk~LldL~ck~VA~~ 130 (381)
++.+.+.+|+.||++|+|+.|.+.|+..+...
T Consensus 77 --------~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~ 108 (109)
T 2vkp_A 77 --------LEADTVLATLYAAKKYIVPALAKACVNFLETS 108 (109)
T ss_dssp --------CCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred --------CCHHHHHHHHHHHHHhCcHHHHHHHHHHHHhh
Confidence 34467889999999999999999999998654
No 10
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=98.14 E-value=2e-06 Score=72.58 Aligned_cols=99 Identities=14% Similarity=0.142 Sum_probs=72.9
Q ss_pred ccEEEEeCCCCEEEecHHHHH-HcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCcccchhhhh
Q 016888 16 SYIWLQTADGSIQQVEQEVAM-FCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDE 94 (381)
Q Consensus 16 ~~IkL~SsDG~iFeVs~eaA~-qS~tIr~mL~d~g~~~~e~~~IPLP~nVss~iLkkIIEYCehHk~~~~s~~ei~eWD~ 94 (381)
+.|+|+. +|+.|.+.+.++. .|++++.|+.... ...|.|+ +|+..+|+.|++||.....
T Consensus 26 ~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~mf~~~~-----~~~i~l~-~~~~~~f~~lL~fiYtg~~------------- 85 (135)
T 2yy9_A 26 CDATLDV-GGLVFKAHWSVLACCSHFFQRIYGDGT-----GGSVVLP-AGFAEIFGLLLDFFYTGHL------------- 85 (135)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHCHHHHHTCC---------CCEEEC-GGGHHHHHHHHHHHHHSCC-------------
T ss_pred cceEEEE-CCEEEehHHHHHHHhCHHHHHHHcCCC-----CCeEEeC-CCCHHHHHHHHHHHhCCCC-------------
Confidence 4677775 6899999999765 6999999865332 4568998 7999999999999987542
Q ss_pred hhccCChHHHHHHHhhcccCCCchHHHHHHHHHHHHHhCCCHH
Q 016888 95 KFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPE 137 (381)
Q Consensus 95 eFLkiD~~~LfeLI~AAnYLdIk~LldL~ck~VA~~IkGKTpE 137 (381)
.++.+.+.+|+.||++|+|+.|.++|++.+...+.|+++.
T Consensus 86 ---~i~~~~v~~ll~~A~~l~i~~L~~~C~~~l~~~l~~~~~~ 125 (135)
T 2yy9_A 86 ---ALTSGNRDQVLLAAKELRVPEAVELCQSFQPQTSVGQAQS 125 (135)
T ss_dssp ---CCCTTTHHHHHHHHHHTTCHHHHHHHHHCCC---------
T ss_pred ---CCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhccCCCCC
Confidence 2344568999999999999999999999999888887654
No 11
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=97.99 E-value=3.6e-05 Score=65.97 Aligned_cols=105 Identities=20% Similarity=0.229 Sum_probs=82.0
Q ss_pred ccEEEEeCCCCEEEecHHHH-HHcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCcccchhhhh
Q 016888 16 SYIWLQTADGSIQQVEQEVA-MFCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDE 94 (381)
Q Consensus 16 ~~IkL~SsDG~iFeVs~eaA-~qS~tIr~mL~d~g~~~~e~~~IPLP~nVss~iLkkIIEYCehHk~~~~s~~ei~eWD~ 94 (381)
+.|+|.. +|+.|.+.+.++ ..|+.++.|+... ........|.|| ++++.++..+++|+......
T Consensus 35 ~Dv~l~v-~~~~~~~Hk~iL~~~S~~F~~~f~~~-~~e~~~~~i~l~-~~~~~~f~~~l~~~Yt~~~~------------ 99 (172)
T 3htm_A 35 TDCCLCV-AGQEFQAHKAILAARSPVFSAMFEHE-MEESKKNRVEIN-DVEPEVFKEMMCFIYTGKAP------------ 99 (172)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHSC-CCGGGTTEEEEC-SSCHHHHHHHHHHHHHSCCT------------
T ss_pred cceEEEE-CCEEEEeeHHHHHHcCHHHHHHHccC-ccccCCCeEEec-CCCHHHHHHHHHHHhCCCCC------------
Confidence 3578877 689999999987 4699999988743 222234679998 79999999999999765421
Q ss_pred hhccCChHHHHHHHhhcccCCCchHHHHHHHHHHHHHhCCCHHHH
Q 016888 95 KFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEI 139 (381)
Q Consensus 95 eFLkiD~~~LfeLI~AAnYLdIk~LldL~ck~VA~~IkGKTpEEI 139 (381)
++...+.+|+.||++|+|+.|.+.|+..+...+...+.-++
T Consensus 100 ----~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~ 140 (172)
T 3htm_A 100 ----NLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEI 140 (172)
T ss_dssp ----TGGGTHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTTHHHH
T ss_pred ----CcHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhCCHHHHHHH
Confidence 23456889999999999999999999999876655555444
No 12
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=97.98 E-value=3.1e-05 Score=63.74 Aligned_cols=92 Identities=16% Similarity=0.179 Sum_probs=75.5
Q ss_pred ccEEEEeCCCCEEEecHHHH-HHcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCcccchhhhh
Q 016888 16 SYIWLQTADGSIQQVEQEVA-MFCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDE 94 (381)
Q Consensus 16 ~~IkL~SsDG~iFeVs~eaA-~qS~tIr~mL~d~g~~~~e~~~IPLP~nVss~iLkkIIEYCehHk~~~~s~~ei~eWD~ 94 (381)
+.|+|.. +|+.|.+.+.++ ..|+.++.|+.. ....|.|+ ++++.+++.+++|+..-...
T Consensus 29 ~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~------~~~~i~l~-~~~~~~f~~ll~~~Ytg~~~------------ 88 (121)
T 1buo_A 29 CDVVIMV-DSQEFHAHRTVLACTSKMFEILFHR------NSQHYTLD-FLSPKTFQQILEYAYTATLQ------------ 88 (121)
T ss_dssp CCEEEEE-SSCEEEECHHHHHHHCHHHHHHTTS------CCSEEEEC-SSCHHHHHHHHHHHHHSCCC------------
T ss_pred CCEEEEE-CCEEEehhHHHHhhcCHHHHHHHcC------CCcEEEeC-CCCHHHHHHHHHhhcCCCcC------------
Confidence 4678876 589999999987 579999998753 24578898 79999999999999865421
Q ss_pred hhccCChHHHHHHHhhcccCCCchHHHHHHHHHHHHH
Q 016888 95 KFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARII 131 (381)
Q Consensus 95 eFLkiD~~~LfeLI~AAnYLdIk~LldL~ck~VA~~I 131 (381)
++.+.+.+|+.||++|+|+.|.+.|+..+..+|
T Consensus 89 ----~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~I 121 (121)
T 1buo_A 89 ----AKAEDLDDLLYAAEILEIEYLEEQCLKMLETIQ 121 (121)
T ss_dssp ----CCGGGHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred ----CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHhC
Confidence 234568999999999999999999999987654
No 13
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=97.95 E-value=6.1e-05 Score=61.48 Aligned_cols=94 Identities=12% Similarity=0.151 Sum_probs=73.6
Q ss_pred CccEEEEeCCCCEEEecHHHHH-HcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCcccchhhh
Q 016888 15 KSYIWLQTADGSIQQVEQEVAM-FCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFD 93 (381)
Q Consensus 15 s~~IkL~SsDG~iFeVs~eaA~-qS~tIr~mL~d~g~~~~e~~~IPLP~nVss~iLkkIIEYCehHk~~~~s~~ei~eWD 93 (381)
.+.|+|.. +|+.|.+.+.++. .|+.++.|+... ...+....|.|+ ++++.++..+++|+......
T Consensus 25 ~~Dv~l~v-~~~~~~aHk~vLaa~S~~F~~~f~~~-~~e~~~~~i~l~-~~~~~~f~~ll~~~Yt~~~~----------- 90 (120)
T 2if5_A 25 LCDVVILV-EGREFPTHRSVLAACSQYFKKLFTSG-AVVDQQNVYEID-FVSAEALTALMDFAYTATLT----------- 90 (120)
T ss_dssp SCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHC------CCSEEECC-SSCHHHHHHHHHHHHHSCCC-----------
T ss_pred CCCeEEEE-CCEEEeHHHHHHHHhCHHHHHHhcCC-ccccCCceEEeC-CCCHHHHHHHHHHHcCCCCc-----------
Confidence 35678876 5899999999986 599999987633 222345678998 79999999999999865421
Q ss_pred hhhccCChHHHHHHHhhcccCCCchHHHHHHHHH
Q 016888 94 EKFIRMDTKRLCELTSAADSLQLKPLVDLTSRAL 127 (381)
Q Consensus 94 ~eFLkiD~~~LfeLI~AAnYLdIk~LldL~ck~V 127 (381)
++.+.+.+|+.||++|+|++|.++|++.+
T Consensus 91 -----~~~~~~~~ll~~A~~~~i~~L~~~C~~~L 119 (120)
T 2if5_A 91 -----VSTANVGDILSAARLLEIPAVSHVCADLL 119 (120)
T ss_dssp -----CCGGGHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred -----cCHHHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 34567899999999999999999999865
No 14
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=97.91 E-value=7.3e-05 Score=61.75 Aligned_cols=94 Identities=15% Similarity=0.221 Sum_probs=75.1
Q ss_pred CccEEEEeCCCCEEEecHHHH-HHcHHHHHHHhhcCCCCCCCccccc-CCCCCHHHHHHHHHHHHhcCCCCCCcccchhh
Q 016888 15 KSYIWLQTADGSIQQVEQEVA-MFCPLICQEVIQKGMGSSKNYAISL-PQRVNPAMLSLILDYCRFHQVPGSSNKERKSF 92 (381)
Q Consensus 15 s~~IkL~SsDG~iFeVs~eaA-~qS~tIr~mL~d~g~~~~e~~~IPL-P~nVss~iLkkIIEYCehHk~~~~s~~ei~eW 92 (381)
-+.|+|.. +|+.|.+.+.++ ..|+.++.|+..... + ....|.| + ++++.++..+++|+..-...
T Consensus 29 ~~Dv~l~v-~~~~~~aHk~iLaa~S~~F~~~f~~~~~-e-~~~~i~l~~-~~~~~~f~~ll~~~Ytg~~~---------- 94 (127)
T 1r29_A 29 LTDVVIVV-SREQFRAHKTVLMACSGLFYSIFTDQLK-R-NLSVINLDP-EINPEGFNILLDFMYTSRLN---------- 94 (127)
T ss_dssp SCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHTSTTT-T-TCSEEECCT-TSCHHHHHHHHHHHHHSCCC----------
T ss_pred CCCEEEEE-CCEEEehHHHHHHHhCHHHHHHhcCCcc-C-CCCEEEeCC-CCCHHHHHHHHHHHcCCCcC----------
Confidence 34678876 588999999988 479999998764322 2 3567889 6 79999999999999764321
Q ss_pred hhhhccCChHHHHHHHhhcccCCCchHHHHHHHHHH
Q 016888 93 DEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALA 128 (381)
Q Consensus 93 D~eFLkiD~~~LfeLI~AAnYLdIk~LldL~ck~VA 128 (381)
++.+.+.+|+.||++|+|+.|.+.|+..+.
T Consensus 95 ------~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~ 124 (127)
T 1r29_A 95 ------LREGNIMAVMATAMYLQMEHVVDTCRKFIK 124 (127)
T ss_dssp ------CCTTTHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred ------cCHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 345678999999999999999999998875
No 15
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=97.83 E-value=0.00012 Score=59.45 Aligned_cols=92 Identities=13% Similarity=0.128 Sum_probs=71.4
Q ss_pred ccEEEEeCCCCEEEecHHHH-HHcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCcccchhhhh
Q 016888 16 SYIWLQTADGSIQQVEQEVA-MFCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDE 94 (381)
Q Consensus 16 ~~IkL~SsDG~iFeVs~eaA-~qS~tIr~mL~d~g~~~~e~~~IPLP~nVss~iLkkIIEYCehHk~~~~s~~ei~eWD~ 94 (381)
+.|+|+. +|+.|.+.+.++ ..|+.++.|+.... ...-.|++| ++++.+++.+++|+..-...
T Consensus 23 ~Dv~l~v-~~~~~~aHk~vLaa~S~yF~~~f~~~~---~~~i~l~~~-~~~~~~f~~ll~~~Yt~~~~------------ 85 (116)
T 2vpk_A 23 CDCTIVI-GEFQFKAHRNVLASFSEYFGAIYRSTS---ENNVFLDQS-QVKADGFQKLLEFIYTGTLN------------ 85 (116)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHCHHHHHHHTTCC---CSCEECCTT-TCCHHHHHHHHHHHHHSCCC------------
T ss_pred CcEEEEE-CCEEEeccHHHHhhcCHHHHHHHcCCC---CCeEEeecC-CCCHHHHHHHHHHHcCCCcc------------
Confidence 4677776 589999999997 57999999876441 122335555 69999999999999764321
Q ss_pred hhccCChHHHHHHHhhcccCCCchHHHHHHHHHH
Q 016888 95 KFIRMDTKRLCELTSAADSLQLKPLVDLTSRALA 128 (381)
Q Consensus 95 eFLkiD~~~LfeLI~AAnYLdIk~LldL~ck~VA 128 (381)
++.+.+.+|+.||++|+|+.|.+.|+..+.
T Consensus 86 ----~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 86 ----LDSWNVKEIHQAADYLKVEEVVTKCKIKME 115 (116)
T ss_dssp ----CCTTTHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred ----cCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 234568999999999999999999998763
No 16
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=97.80 E-value=2.2e-05 Score=65.44 Aligned_cols=102 Identities=19% Similarity=0.211 Sum_probs=73.1
Q ss_pred ccEEEEeCCCCEEEecHHHH-HHcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCcccchhhhh
Q 016888 16 SYIWLQTADGSIQQVEQEVA-MFCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDE 94 (381)
Q Consensus 16 ~~IkL~SsDG~iFeVs~eaA-~qS~tIr~mL~d~g~~~~e~~~IPLP~nVss~iLkkIIEYCehHk~~~~s~~ei~eWD~ 94 (381)
+.|+|.. +|+.|.+.+.++ ..|+.++.|+... ...+....|.|| ++++.+++.+++|+......
T Consensus 26 ~Dv~l~v-~~~~~~~Hk~iL~~~S~~F~~~f~~~-~~e~~~~~i~l~-~~~~~~~~~~l~~~Y~~~~~------------ 90 (145)
T 4eoz_A 26 TDCCLCV-AGQEFQAHKAILAARSPVFSAMFEHE-MEESKKNRVEIN-DVEPEVFKEMMCFIYTGKAP------------ 90 (145)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHSS-SHHHHHTEEEEC-SSCHHHHHHHHHHHHHSCCT------------
T ss_pred cceEEEE-CCEEEEeehHHHHHcCHHHHHHHcCC-CcCCCCceEEec-CCCHHHHHHHHHhhccCccC------------
Confidence 4678876 688999999998 4699999987633 211123578998 79999999999999875431
Q ss_pred hhccCChHHHHHHHhhcccCCCchHHHHHHHHHHHHHhCCCH
Q 016888 95 KFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTP 136 (381)
Q Consensus 95 eFLkiD~~~LfeLI~AAnYLdIk~LldL~ck~VA~~IkGKTp 136 (381)
++.+.+.+|+.||++|+|+.|.+.|+..+...+...+.
T Consensus 91 ----~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~ 128 (145)
T 4eoz_A 91 ----NLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENA 128 (145)
T ss_dssp ----TGGGTHHHHHHHHHHTTCHHHHHHHHCC----------
T ss_pred ----CcHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCHHHH
Confidence 23356789999999999999999999998776654443
No 17
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=97.77 E-value=0.00011 Score=60.32 Aligned_cols=89 Identities=12% Similarity=0.154 Sum_probs=72.9
Q ss_pred ccEEEEeCCCCEEEecHHHHH-HcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCcccchhhhh
Q 016888 16 SYIWLQTADGSIQQVEQEVAM-FCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDE 94 (381)
Q Consensus 16 ~~IkL~SsDG~iFeVs~eaA~-qS~tIr~mL~d~g~~~~e~~~IPLP~nVss~iLkkIIEYCehHk~~~~s~~ei~eWD~ 94 (381)
+.|+|.. +|+.|.+.+.++. .|+.++.|+... ...|.++ .+++.+++.+++|+..-..
T Consensus 28 ~Dv~l~v-~~~~~~aHk~vLaa~S~yF~~~f~~~------~~~i~l~-~~~~~~f~~ll~~~Ytg~~------------- 86 (119)
T 2q81_A 28 CDCTFVV-DGVHFKAHKAVLAACSEYFKMLFVDQ------KDVVHLD-ISNAAGLGQVLEFMYTAKL------------- 86 (119)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHHC------CSGGGGG-GCCHHHHHHHHHHHHHSCC-------------
T ss_pred cceEEEE-CCEEEehhHHHHHHcCHHHHHHHcCC------CCEEEeC-CCCHHHHHHHHHHHcCCCC-------------
Confidence 4678875 6899999999875 699999998742 4468888 7999999999999976542
Q ss_pred hhccCChHHHHHHHhhcccCCCchHHHHHHHHHH
Q 016888 95 KFIRMDTKRLCELTSAADSLQLKPLVDLTSRALA 128 (381)
Q Consensus 95 eFLkiD~~~LfeLI~AAnYLdIk~LldL~ck~VA 128 (381)
.++.+.+.+|+.||++|+|+.|.+.|+..++
T Consensus 87 ---~i~~~~~~~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 87 ---SLSPENVDDVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp ---CCCTTTHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred ---ccCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 1344568999999999999999999998874
No 18
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=97.76 E-value=7e-05 Score=64.01 Aligned_cols=94 Identities=24% Similarity=0.307 Sum_probs=73.1
Q ss_pred ccEEEEeCCCCEEEecHHHHH-HcHHHHHHHhhcCCC-CCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCcccchhhh
Q 016888 16 SYIWLQTADGSIQQVEQEVAM-FCPLICQEVIQKGMG-SSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFD 93 (381)
Q Consensus 16 ~~IkL~SsDG~iFeVs~eaA~-qS~tIr~mL~d~g~~-~~e~~~IPLP~nVss~iLkkIIEYCehHk~~~~s~~ei~eWD 93 (381)
+.|+|+. +|+.|.+.+.++. .|+.++.|+...... .+....|.|+ +|++.+++.+++|+..-..
T Consensus 48 ~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~mf~~~~~e~e~~~~~I~l~-~v~~~~f~~lL~fiYtg~~------------ 113 (144)
T 2ppi_A 48 CDAHLVL-DGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELE-GISVMVMREILDYIFSGQI------------ 113 (144)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHHCC-----CCCEEECC-SSCHHHHHHHHHHHTTSCC------------
T ss_pred cceEEEE-CCEEEehHHHHHHHcCHHHHHHHcCCCccccCCCcEEEeC-CCCHHHHHHHHHHHhCCCC------------
Confidence 4677776 6899999999886 699999998754221 1235679998 7999999999999864321
Q ss_pred hhhccCChHHHHHHHhhcccCCCchHHHHHHHHH
Q 016888 94 EKFIRMDTKRLCELTSAADSLQLKPLVDLTSRAL 127 (381)
Q Consensus 94 ~eFLkiD~~~LfeLI~AAnYLdIk~LldL~ck~V 127 (381)
.++.+.+.+|+.||++|+|+.|.++|++.+
T Consensus 114 ----~i~~~~v~~ll~~A~~l~i~~L~~~C~~~L 143 (144)
T 2ppi_A 114 ----RLNEDTIQDVVQAADLLLLTDLKTLCCEFL 143 (144)
T ss_dssp ----CCCTTTHHHHHHHHHHTTCHHHHHHHHTTC
T ss_pred ----CCCHHHHHHHHHHHHHhCcHHHHHHHHHHh
Confidence 134567899999999999999999998754
No 19
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=97.74 E-value=6.8e-05 Score=61.61 Aligned_cols=90 Identities=14% Similarity=0.133 Sum_probs=72.4
Q ss_pred ccEEEEeCCCCEEEecHHHHH-HcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCcccchhhhh
Q 016888 16 SYIWLQTADGSIQQVEQEVAM-FCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDE 94 (381)
Q Consensus 16 ~~IkL~SsDG~iFeVs~eaA~-qS~tIr~mL~d~g~~~~e~~~IPLP~nVss~iLkkIIEYCehHk~~~~s~~ei~eWD~ 94 (381)
+.|+|.. +|+.|.+.+.++. .|+.++.|+.... ...|.|| ++++.+++.+++|+..-...
T Consensus 25 ~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~~~-----~~~i~l~-~~~~~~f~~ll~~iYtg~~~------------ 85 (119)
T 3b84_A 25 CDATLDV-GGLVFKAHWSVLACCSHFFQSLYGDGS-----GGSVVLP-AGFAEIFGLLLDFFYTGHLA------------ 85 (119)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHCHHHHHHHTTTT-----CCCEEEC-GGGHHHHHHHHHHHHHSCCC------------
T ss_pred cceEEEE-CCEEEEeeHHHHhhcCHHHHHHHCCCC-----CCeEEeC-CCCHHHHHHHHHHHcCCCCc------------
Confidence 4677775 6899999999875 6999999876432 4578998 79999999999999764421
Q ss_pred hhccCChHHHHHHHhhcccCCCchHHHHHHHHHH
Q 016888 95 KFIRMDTKRLCELTSAADSLQLKPLVDLTSRALA 128 (381)
Q Consensus 95 eFLkiD~~~LfeLI~AAnYLdIk~LldL~ck~VA 128 (381)
++.+.+.+|+.||++|+|+.|.+.|+..+.
T Consensus 86 ----~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (119)
T 3b84_A 86 ----LTSGNRDQVLLAARELRVPEAVELCQSFKP 115 (119)
T ss_dssp ----CCTTTHHHHHHHHHHTTCHHHHHHHHHCC-
T ss_pred ----cCHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 234558899999999999999999998764
No 20
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=97.70 E-value=4.4e-05 Score=63.47 Aligned_cols=92 Identities=15% Similarity=0.235 Sum_probs=69.5
Q ss_pred ccEEEEeCCCCEEEecHHHHH-HcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCcccchhhhh
Q 016888 16 SYIWLQTADGSIQQVEQEVAM-FCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDE 94 (381)
Q Consensus 16 ~~IkL~SsDG~iFeVs~eaA~-qS~tIr~mL~d~g~~~~e~~~IPLP~nVss~iLkkIIEYCehHk~~~~s~~ei~eWD~ 94 (381)
+.|+|.. +|+.|.+.+.++. .|+.++.|+... ....|.||.++++.+++.+++|+.....
T Consensus 34 ~Dv~l~v-~~~~~~~Hk~vLaa~S~~F~~~f~~~-----~~~~i~l~~~~~~~~f~~ll~~iYtg~~------------- 94 (129)
T 3ga1_A 34 CDVSVVV-KGHAFKAHRAVLAASSSYFRDLFNNS-----RSAVVELPAAVQPQSFQQILSFCYTGRL------------- 94 (129)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHBHHHHHHHHHC-----CCSEEECCTTCCHHHHHHHHHHHHHSEE-------------
T ss_pred cceEEEE-CCEEEEehHHHHHHcCHHHHHHHcCC-----CCCEEEECCCCCHHHHHHHHHHHhCCcc-------------
Confidence 4677776 7999999999886 699999988754 2557888746999999999999876431
Q ss_pred hhccCChHHHHHHHhhcccCCCchHHHHHHHHHHH
Q 016888 95 KFIRMDTKRLCELTSAADSLQLKPLVDLTSRALAR 129 (381)
Q Consensus 95 eFLkiD~~~LfeLI~AAnYLdIk~LldL~ck~VA~ 129 (381)
.++.+.+.+|+.||++|+|+.|.+.|+..+..
T Consensus 95 ---~i~~~~~~~ll~~A~~~~i~~l~~~C~~~L~~ 126 (129)
T 3ga1_A 95 ---SMNVGDQDLLMYTAGFLQIQEIMEKGTEFFLK 126 (129)
T ss_dssp ---ECCTTTHHHHHHHHHHTTBTTSSCC-------
T ss_pred ---ccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 23455689999999999999999999988754
No 21
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=97.64 E-value=0.00011 Score=61.75 Aligned_cols=96 Identities=8% Similarity=0.170 Sum_probs=75.8
Q ss_pred ccEEEEeCCCCEEEecHHHHH-HcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCcccchhhhh
Q 016888 16 SYIWLQTADGSIQQVEQEVAM-FCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDE 94 (381)
Q Consensus 16 ~~IkL~SsDG~iFeVs~eaA~-qS~tIr~mL~d~g~~~~e~~~IPLP~nVss~iLkkIIEYCehHk~~~~s~~ei~eWD~ 94 (381)
+.|+|+. +|+.|.+.+.++. .|+.++.|+.... . +...|.+|..|+...++.|++|+..-...
T Consensus 37 ~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~~~-~--e~~~i~l~~~v~~~~~~~lL~~~Ytg~~~------------ 100 (138)
T 2z8h_A 37 CDVTVLV-EGQRFRAHRSVLAACSSYFHSRIVGQT-D--AELTVTLPEEVTVKGFEPLIQFAYTAKLI------------ 100 (138)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHCHHHHHHHTTCC-C--TTEEEECCTTSCHHHHHHHHHHHHHSCCC------------
T ss_pred cCeEEEE-CCEEEechHHHHHHcCHHHHHHHhcCC-C--CCceEEeCCCCCHHHHHHHHHHhcCCCcc------------
Confidence 4678876 5899999999985 6999999876432 1 24568886479999999999999765421
Q ss_pred hhccCChHHHHHHHhhcccCCCchHHHHHHHHHHHHH
Q 016888 95 KFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARII 131 (381)
Q Consensus 95 eFLkiD~~~LfeLI~AAnYLdIk~LldL~ck~VA~~I 131 (381)
++.+.+.+|+.||++|+|+.|.+.|++.+...+
T Consensus 101 ----i~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~~l 133 (138)
T 2z8h_A 101 ----LSKDNVDEVCRCVEFLSVHNIEESCFQFLKFKF 133 (138)
T ss_dssp ----CCTTTHHHHHHHHHHHTCGGGHHHHHHHTTCCC
T ss_pred ----cCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhc
Confidence 344568999999999999999999999886543
No 22
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=97.52 E-value=0.00017 Score=66.15 Aligned_cols=107 Identities=22% Similarity=0.251 Sum_probs=78.1
Q ss_pred CccEEEEeCCCCEEEecHHHHH-HcHHHHHHHhhcCC-CCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCcccchhh
Q 016888 15 KSYIWLQTADGSIQQVEQEVAM-FCPLICQEVIQKGM-GSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSF 92 (381)
Q Consensus 15 s~~IkL~SsDG~iFeVs~eaA~-qS~tIr~mL~d~g~-~~~e~~~IPLP~nVss~iLkkIIEYCehHk~~~~s~~ei~eW 92 (381)
-+.|+|.. +|+.|.+.+.++. .|+.++.|+..... ..+....|.|+ +|++.++..+++|+..-...
T Consensus 31 ~~Dv~l~v-~~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~~~~~i~l~-~v~~~~f~~ll~~~Yt~~~~---------- 98 (256)
T 3hve_A 31 FCDAHLVL-DGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELE-GISVMVMREILDYIFSGQIR---------- 98 (256)
T ss_dssp CCCEEEEE-TTEEEEECHHHHHTTCHHHHHTC-----------CEEECS-SCCHHHHHHHHHHHHHSCCC----------
T ss_pred CcceEEEE-CCEEEechHHHHHHcCHHHHHHhCCCCCcccCCCCeEEeC-CCCHHHHHHHHhhccCCCCc----------
Confidence 34677776 6899999999986 58999998754321 12235679998 79999999999999865421
Q ss_pred hhhhccCChHHHHHHHhhcccCCCchHHHHHHHHHHHHHhCCCHHHH
Q 016888 93 DEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEI 139 (381)
Q Consensus 93 D~eFLkiD~~~LfeLI~AAnYLdIk~LldL~ck~VA~~IkGKTpEEI 139 (381)
++.+.+.+|+.||++|+|+.|.+.|+..+...+.-.+.-.|
T Consensus 99 ------i~~~~v~~ll~~A~~l~i~~l~~~c~~~L~~~l~~~n~~~i 139 (256)
T 3hve_A 99 ------LNEDTIQDVVQAADLLLLTDLKTLCCEFLEGCIAAENCIGI 139 (256)
T ss_dssp ------CC-CCHHHHHHHHHHHTCHHHHHHHHHHHHHTCCSSTTHHH
T ss_pred ------ccHhHHHHHHHHHHHHChHHHHHHHHHHHHhhCCHhhHHHH
Confidence 34456899999999999999999999999876655444444
No 23
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=97.47 E-value=0.0004 Score=65.40 Aligned_cols=105 Identities=20% Similarity=0.229 Sum_probs=79.4
Q ss_pred ccEEEEeCCCCEEEecHHHH-HHcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCcccchhhhh
Q 016888 16 SYIWLQTADGSIQQVEQEVA-MFCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDE 94 (381)
Q Consensus 16 ~~IkL~SsDG~iFeVs~eaA-~qS~tIr~mL~d~g~~~~e~~~IPLP~nVss~iLkkIIEYCehHk~~~~s~~ei~eWD~ 94 (381)
+.|+|.. +|+.|.+.+.++ ..|+.++.|+... ..+.....|.|+ ++++.+++.+++|+.....+
T Consensus 175 ~Dv~l~v-~~~~f~~Hk~vLaa~S~~F~~~f~~~-~~e~~~~~i~l~-~~~~~~f~~~L~~iYt~~~~------------ 239 (312)
T 3hqi_A 175 TDCCLCV-AGQEFQAHKAILAARSPVFSAMFEHE-MEESKKNRVEIN-DVEPEVFKEMMCFIYTGKAP------------ 239 (312)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHCHHHHHHTTC------CCSEEEEC-SSCHHHHHHHHHHHHHSCCT------------
T ss_pred CceEEEE-CCEEEeHHHHHHHHcCHHHHHHhccC-ccccCCceEEec-CCCHHHHHHHHHhhcCCCCC------------
Confidence 4678877 689999999988 5699999987532 223345679998 79999999999999765421
Q ss_pred hhccCChHHHHHHHhhcccCCCchHHHHHHHHHHHHHhCCCHHHH
Q 016888 95 KFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEI 139 (381)
Q Consensus 95 eFLkiD~~~LfeLI~AAnYLdIk~LldL~ck~VA~~IkGKTpEEI 139 (381)
+....+.+|+.||++|+++.|..+|...+...+.-.+.-++
T Consensus 240 ----~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~~~~~n~~~~ 280 (312)
T 3hqi_A 240 ----NLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEI 280 (312)
T ss_dssp ----THHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCTTTHHHH
T ss_pred ----ChHHHHHHHHHHHHHhCHHHHHHHHHHHHHccCCHHHHHHH
Confidence 12367899999999999999999999998765554454443
No 24
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=97.41 E-value=0.00016 Score=67.34 Aligned_cols=108 Identities=15% Similarity=0.179 Sum_probs=78.5
Q ss_pred ccEEEEeC--CCCEEEecHHHHH-HcHHHHHHHhhcCCCCCCCcccccCC-----CCCHHHHHHHHHHHHhcCCCCCCcc
Q 016888 16 SYIWLQTA--DGSIQQVEQEVAM-FCPLICQEVIQKGMGSSKNYAISLPQ-----RVNPAMLSLILDYCRFHQVPGSSNK 87 (381)
Q Consensus 16 ~~IkL~Ss--DG~iFeVs~eaA~-qS~tIr~mL~d~g~~~~e~~~IPLP~-----nVss~iLkkIIEYCehHk~~~~s~~ 87 (381)
+.|+|... ||+.|.+.+.++. .|+.++.|+... ..++....|.|+. +|++.++..+++|+.....
T Consensus 33 ~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~~-~~e~~~~~i~l~~~~~~~~v~~~~f~~ll~~~Ytg~~------ 105 (279)
T 3i3n_A 33 CDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQ-FSESRSGRVEMRKWSSEPGPEPDTVEAVIEYMYTGRI------ 105 (279)
T ss_dssp CCEEEECC----CEEEECHHHHHHHCTTSGGGCCC---------EEECCCCSSTTCSCHHHHHHHHHHHHHSEE------
T ss_pred CCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcCC-CccccCCeEEeccccccCCCCHHHHHHHHHhhCcCCc------
Confidence 46888876 7999999999987 589999876432 2222345677752 5999999999999976432
Q ss_pred cchhhhhhhccCChHHHHHHHhhcccCCCchHHHHHHHHHHHHHhCCCHHHHH
Q 016888 88 ERKSFDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIR 140 (381)
Q Consensus 88 ei~eWD~eFLkiD~~~LfeLI~AAnYLdIk~LldL~ck~VA~~IkGKTpEEIR 140 (381)
.++.+.+.+|+.||++|+|+.|.+.|+..+...+...+.-.|.
T Consensus 106 ----------~i~~~~v~~ll~~A~~l~i~~L~~~c~~~L~~~l~~~n~~~i~ 148 (279)
T 3i3n_A 106 ----------RVSTGSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIH 148 (279)
T ss_dssp ----------EEETTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTTTHHHHH
T ss_pred ----------ccCHHHHHHHHHHHHHHCcHHHHHHHHHHHHHcCCcchHHHHH
Confidence 1234568999999999999999999999998877666655553
No 25
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=97.33 E-value=6.5e-05 Score=61.89 Aligned_cols=90 Identities=14% Similarity=0.219 Sum_probs=70.6
Q ss_pred ccEEEEeCCCCEEEecHHHHH-HcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCcccchhhhh
Q 016888 16 SYIWLQTADGSIQQVEQEVAM-FCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDE 94 (381)
Q Consensus 16 ~~IkL~SsDG~iFeVs~eaA~-qS~tIr~mL~d~g~~~~e~~~IPLP~nVss~iLkkIIEYCehHk~~~~s~~ei~eWD~ 94 (381)
+.|+|+. +|+.|.+.+.++. .|+.++.|+..... +...|.+|..++..+++.+++|+..-..
T Consensus 33 ~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~~~~---e~~~i~l~~~~~~~~f~~~l~~iYtg~~------------- 95 (125)
T 3ohu_A 33 CDVTLIV-ERKEFRAHRAVLAACSEYFWQALVGQTK---NDLVVSLPEEVTARGFGPLLQFAYTAKL------------- 95 (125)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHBHHHHHHHTTCCC---SSCEEECCTTCCHHHHHHHHHHHTTSEE-------------
T ss_pred cceEEEE-CCEEEechHHHHHHcCHHHHHHhcCCCC---CCcEEEeCCCCCHHHHHHHHHhHcCCce-------------
Confidence 4678875 6899999999886 59999998764321 3567889833999999999999864321
Q ss_pred hhccCChHHHHHHHhhcccCCCchHHHHHHH
Q 016888 95 KFIRMDTKRLCELTSAADSLQLKPLVDLTSR 125 (381)
Q Consensus 95 eFLkiD~~~LfeLI~AAnYLdIk~LldL~ck 125 (381)
.++.+.+.+|+.||++|+|+.|.+.|++
T Consensus 96 ---~~~~~~v~~ll~~A~~l~i~~L~~~C~~ 123 (125)
T 3ohu_A 96 ---LLSRENIREVIRCAEFLRMHNLEDSCFS 123 (125)
T ss_dssp ---EECTTTHHHHHHHHHHHTBSSCTTSSCC
T ss_pred ---EECHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 2345668999999999999999998874
No 26
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=97.28 E-value=0.00024 Score=59.10 Aligned_cols=86 Identities=14% Similarity=0.113 Sum_probs=67.8
Q ss_pred ccEEEEeCCCCEEEecHHHHHH-cHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCcccchhhhh
Q 016888 16 SYIWLQTADGSIQQVEQEVAMF-CPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDE 94 (381)
Q Consensus 16 ~~IkL~SsDG~iFeVs~eaA~q-S~tIr~mL~d~g~~~~e~~~IPLP~nVss~iLkkIIEYCehHk~~~~s~~ei~eWD~ 94 (381)
+.|+|.. +|+.|.+.+.++.. |+.++. ....|.|+ +|++.+|+.+++||..-..
T Consensus 31 ~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~----------~~~~i~l~-~v~~~~f~~ll~fiYtg~~------------- 85 (119)
T 3m5b_A 31 CDTLITV-GSQEFPAHSLVLAGVSQQLGR----------RGQWALGE-GISPSTFAQLLNFVYGESV------------- 85 (119)
T ss_dssp CCEEEEE-TTEEEEECHHHHHTTCGGGCC----------CEEEECCS-SCCHHHHHHHHHHHTTCCE-------------
T ss_pred cceEEEE-CCEEEeeEHHHHHHcCHHHhc----------CCCEEEeC-CCCHHHHHHHHHHHcCCCc-------------
Confidence 4678876 69999999998865 676652 24568898 7999999999999864321
Q ss_pred hhccCChHHHHHHHhhcccCCCchHHHHHHHHHHH
Q 016888 95 KFIRMDTKRLCELTSAADSLQLKPLVDLTSRALAR 129 (381)
Q Consensus 95 eFLkiD~~~LfeLI~AAnYLdIk~LldL~ck~VA~ 129 (381)
.++.+.+.+|+.||++|+|+.|.+.|++++.+
T Consensus 86 ---~i~~~~v~~ll~aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 86 ---ELQPGELRPLQEAARALGVQSLEEACWRARGD 117 (119)
T ss_dssp ---EECGGGHHHHHHHHHHTTCHHHHHHHHHHC--
T ss_pred ---CcCHHHHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 24566789999999999999999999998754
No 27
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=97.08 E-value=0.00023 Score=58.87 Aligned_cols=92 Identities=10% Similarity=0.202 Sum_probs=71.3
Q ss_pred ccEEEEeCCCCEEEecHHHHH-HcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCcccchhhhh
Q 016888 16 SYIWLQTADGSIQQVEQEVAM-FCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDE 94 (381)
Q Consensus 16 ~~IkL~SsDG~iFeVs~eaA~-qS~tIr~mL~d~g~~~~e~~~IPLP~nVss~iLkkIIEYCehHk~~~~s~~ei~eWD~ 94 (381)
+.|+|.. +|+.|.+.+.++. .|+.++.|+.... . +...|.+|.+|+...++.+++|+..-..
T Consensus 30 ~Dv~l~v-~~~~~~aHk~vLaa~S~yF~~mf~~~~-~--e~~~i~l~~~v~~~~f~~lL~~iYtg~~------------- 92 (124)
T 2ihc_A 30 CDVTIFV-EGQRFRAHRSVLAACSSYFHSRIVGQA-D--GELNITLPEEVTVKGFEPLIQFAYTAKL------------- 92 (124)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHBHHHHHHHTTC------CEEEECCTTSCHHHHHHHHHHHHHSEE-------------
T ss_pred cCEEEEE-CCEEEecHHHHHHHcCHHHHHHHcCCC-C--CCceEeecCCcCHHHHHHHHHHhcCCCc-------------
Confidence 4677776 5899999999886 6999999876432 1 2356888657999999999999876431
Q ss_pred hhccCChHHHHHHHhhcccCCCchHHHHHHHHH
Q 016888 95 KFIRMDTKRLCELTSAADSLQLKPLVDLTSRAL 127 (381)
Q Consensus 95 eFLkiD~~~LfeLI~AAnYLdIk~LldL~ck~V 127 (381)
.++.+.+.+|+.||++|+|+.|.+.|++.+
T Consensus 93 ---~i~~~~v~~ll~~A~~~~~~~L~~~C~~~l 122 (124)
T 2ihc_A 93 ---ILSKENVDEVCKCVEFLSVHNIEESCFQFL 122 (124)
T ss_dssp ---EEETTTHHHHHHHHHHHTBSSCCGGGGGTC
T ss_pred ---ccCHHHHHHHHHHHHHHCCHHHHHHHHHHH
Confidence 123456899999999999999999998754
No 28
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=97.04 E-value=0.0013 Score=53.98 Aligned_cols=83 Identities=13% Similarity=0.160 Sum_probs=66.3
Q ss_pred ccEEEEeCCCCEEEecHHHH-HHcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCcccchhhhh
Q 016888 16 SYIWLQTADGSIQQVEQEVA-MFCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDE 94 (381)
Q Consensus 16 ~~IkL~SsDG~iFeVs~eaA-~qS~tIr~mL~d~g~~~~e~~~IPLP~nVss~iLkkIIEYCehHk~~~~s~~ei~eWD~ 94 (381)
+.|+|.. +|+.|.+.+.++ ..|+.++.|+... ...|.|+ ++++.+++.+++|+..-...
T Consensus 32 ~Dv~l~v-~~~~f~aHk~vLaa~S~~F~~~f~~~------~~~i~l~-~~~~~~f~~~l~~~Ytg~~~------------ 91 (116)
T 3fkc_A 32 CDVTVIV-EDRKFRAHKNILSASSTYFHQLFSVA------GQVVELS-FIRAEIFAEILNYIYSSKIV------------ 91 (116)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHCHHHHHHTTSC------CSEEEEC-SSCHHHHHHHHHHHTTSCCC------------
T ss_pred eeEEEEE-CCEEEehhHHHHHHcCHHHHHHHcCC------CCEEEeC-CCCHHHHHHHHHhhcCCCcC------------
Confidence 4677776 689999999988 4699999987532 4578898 79999999999998653321
Q ss_pred hhccCChHHHHHHHhhcccCCCchHHH
Q 016888 95 KFIRMDTKRLCELTSAADSLQLKPLVD 121 (381)
Q Consensus 95 eFLkiD~~~LfeLI~AAnYLdIk~Lld 121 (381)
.++.+.+.+|+.||++|+|++|.+
T Consensus 92 ---~~~~~~~~~ll~~A~~l~i~~L~~ 115 (116)
T 3fkc_A 92 ---RVRSDLLDELIKSGQLLGVKFIAA 115 (116)
T ss_dssp ---SCCHHHHHHHHHHHHHHTCHHHHT
T ss_pred ---CCCHHHHHHHHHHHHHhCccccCc
Confidence 245677899999999999999975
No 29
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=80.46 E-value=4.5 Score=32.79 Aligned_cols=95 Identities=11% Similarity=0.197 Sum_probs=64.4
Q ss_pred ccEEEEeCCCCEEEecHHHHHHc--HHHHHHHhhcC-CC--CCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCcccch
Q 016888 16 SYIWLQTADGSIQQVEQEVAMFC--PLICQEVIQKG-MG--SSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERK 90 (381)
Q Consensus 16 ~~IkL~SsDG~iFeVs~eaA~qS--~tIr~mL~d~g-~~--~~e~~~IPLP~nVss~iLkkIIEYCehHk~~~~s~~ei~ 90 (381)
..|+|.= .|+.|.++...+... ..+..|+.... .. .+....+=+ .-++.+++.|+.|++.-+-.-+. +
T Consensus 6 ~~v~LNV-GG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~~fi--DRdp~~F~~IL~~lr~g~l~~p~--~-- 78 (107)
T 3drz_A 6 KWVRLNV-GGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI--DRDPTYFGPVLNYLRHGKLVINK--D-- 78 (107)
T ss_dssp CEEEEEE-TTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSCEEE--CSCHHHHHHHHHHHHHSCCCCCT--T--
T ss_pred CEEEEEE-CCEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCceEEe--cCChHHHHHHHHHhCCCeeCCCC--C--
Confidence 3455544 499999999999764 36777754221 11 112344555 58999999999999986543221 1
Q ss_pred hhhhhhccCChHHHHHHHhhcccCCCchHHHHHHHHHH
Q 016888 91 SFDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALA 128 (381)
Q Consensus 91 eWD~eFLkiD~~~LfeLI~AAnYLdIk~LldL~ck~VA 128 (381)
+. ...|...|.|.+|.+|+++|-..|.
T Consensus 79 --------~~---~~~l~~Ea~fy~l~~L~~~l~~~i~ 105 (107)
T 3drz_A 79 --------LA---EEGVLEEAEFYNITSLIKLVKDKIR 105 (107)
T ss_dssp --------SC---HHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred --------CC---HHHHHHHHHHCCCHHHHHHHHHHHh
Confidence 11 2457889999999999999987764
No 30
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=43.87 E-value=26 Score=32.16 Aligned_cols=102 Identities=12% Similarity=0.230 Sum_probs=67.1
Q ss_pred CCCCCccEEEEeCCCCEEEecHHHHHHcH--HHHHHHhhc-CCC--CCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCC
Q 016888 11 PEMMKSYIWLQTADGSIQQVEQEVAMFCP--LICQEVIQK-GMG--SSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSS 85 (381)
Q Consensus 11 Pe~~s~~IkL~SsDG~iFeVs~eaA~qS~--tIr~mL~d~-g~~--~~e~~~IPLP~nVss~iLkkIIEYCehHk~~~~s 85 (381)
|...+..|+|-= .|..|.+....+..-+ .+..|+... .+. .+....+=+ +-++.++..|+.|++.-+-.-+.
T Consensus 7 ~g~~~~~V~LNV-GG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~geyFI--DRDP~~F~~ILnyLRtG~L~lP~ 83 (202)
T 3drx_A 7 PGSVSKWVRLNV-GGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI--DRDPTYFGPVLNYLRHGKLVINK 83 (202)
T ss_dssp SSCCCCEEEEEE-TTEEEEEETTGGGSCTTSSTHHHHSCCCC----BCTTCCEEE--CSCSTTHHHHHHHHHHSCCCCCT
T ss_pred CCCCCCEEEEEE-CCEEEEEeHHHHhCCCcchHHHHhcCccccCcccCCCccEEe--cCChHHHHHHHHHhcCCccCCCC
Confidence 333355666654 4999999988887643 566664322 111 112344555 58999999999999986533221
Q ss_pred cccchhhhhhhccCChHHHHHHHhhcccCCCchHHHHHHHHHHHH
Q 016888 86 NKERKSFDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARI 130 (381)
Q Consensus 86 ~~ei~eWD~eFLkiD~~~LfeLI~AAnYLdIk~LldL~ck~VA~~ 130 (381)
. +. ...|...|.|.+|.+|+.+|-..+...
T Consensus 84 --~----------~~---~~~l~eEA~FygL~~Lv~~l~~~i~er 113 (202)
T 3drx_A 84 --D----------LA---EEGVLEEAEFYNITSLIKLVKDKIRER 113 (202)
T ss_dssp --T----------SC---HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred --C----------CC---HHHHHHHHHHCCcHHHHHHHHHHHHHH
Confidence 1 11 135788999999999999999888653
No 31
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=27.30 E-value=49 Score=27.69 Aligned_cols=90 Identities=9% Similarity=0.023 Sum_probs=57.0
Q ss_pred cEEEEeCCCCEEEecHHHHHHcHHHHHHHhhcC---CCCCCCcccccCCCCCHHHHHHHHHHHHhcCCCCCCcccchhhh
Q 016888 17 YIWLQTADGSIQQVEQEVAMFCPLICQEVIQKG---MGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFD 93 (381)
Q Consensus 17 ~IkL~SsDG~iFeVs~eaA~qS~tIr~mL~d~g---~~~~e~~~IPLP~nVss~iLkkIIEYCehHk~~~~s~~ei~eWD 93 (381)
.|+ .--.|..|.++...+..-+- .+|...+ ........+=+ .-++..++.|+.|++.-+-.-+.+
T Consensus 14 ~V~-LNVGG~~F~t~~~TL~~~p~--S~L~~~~~~~~~~~~~g~~Fi--DRdp~~F~~ILnflR~G~l~~p~~------- 81 (124)
T 1s1g_A 14 LIV-LNVSGRRFQTWRTTLERYPD--TLLGSTEKEFFFNEDTKEYFF--DRDPEVFRCVLNFYRTGKLHYPRY------- 81 (124)
T ss_dssp EEE-EEETTEEEEEEHHHHTTSTT--SSTTSSGGGGTBCSSSCSEEE--CSCHHHHHHHHHHHHHSCBCCCTT-------
T ss_pred EEE-EEeCCEEEEEeHHHHhcCCC--ceecccCCcccccCCCCcEEE--cCChHHHHHHHHHHhcCCCCCCCC-------
Confidence 444 44569999999988865321 0111111 01112345556 579999999999999854321110
Q ss_pred hhhccCChHHHHHHHhhcccCCCchH-HHHHHHH
Q 016888 94 EKFIRMDTKRLCELTSAADSLQLKPL-VDLTSRA 126 (381)
Q Consensus 94 ~eFLkiD~~~LfeLI~AAnYLdIk~L-ldL~ck~ 126 (381)
+ .+-.|...|.|.+|.+| ++.||..
T Consensus 82 -----~---~~~~l~~Ea~fy~i~~l~l~~cC~~ 107 (124)
T 1s1g_A 82 -----E---CISAYDDELAFYGILPEIIGDCCYE 107 (124)
T ss_dssp -----S---CHHHHHHHHHHTTCCGGGBCHHHHH
T ss_pred -----c---CHHHHHHHHHHcCCChHHHHHHHHH
Confidence 1 25678899999999998 4788754
No 32
>2k9n_A MYB24; R2R3 domain, DNA-binding, nucleus, DNA binding protein; NMR {Trichomonas vaginalis} PDB: 2kdz_A
Probab=21.58 E-value=47 Score=26.53 Aligned_cols=36 Identities=19% Similarity=0.311 Sum_probs=27.2
Q ss_pred HHHHHHHHhCCCHHHHHhHcC------CC-CCCChHhhhcccc
Q 016888 124 SRALARIIEGKTPEEIREIFH------LP-DDLTEEEKLEPLK 159 (381)
Q Consensus 124 ck~VA~~IkGKTpEEIRe~Fg------I~-nD~TpEEEeEi~k 159 (381)
-..||..+.|+|+.++|+.+. |. ..+|+||...++.
T Consensus 24 W~~Ia~~~~~Rt~~qcr~Rw~~~L~p~i~~~~WT~eEd~~L~~ 66 (107)
T 2k9n_A 24 WIRISQLMITRNPRQCRERWNNYINPALRTDPWSPEEDMLLDQ 66 (107)
T ss_dssp HHHHHHHTTTSCHHHHHHHHHHHSSSCCTTCCCCHHHHHHHHH
T ss_pred HHHHhhhcCCCCHHHHHHHHHHHHcccccccccCHHHHHHHHH
Confidence 456888888999999999653 32 4799998876553
Done!