BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016890
(381 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224091513|ref|XP_002309277.1| predicted protein [Populus trichocarpa]
gi|222855253|gb|EEE92800.1| predicted protein [Populus trichocarpa]
Length = 410
Score = 545 bits (1403), Expect = e-152, Method: Compositional matrix adjust.
Identities = 268/374 (71%), Positives = 304/374 (81%), Gaps = 13/374 (3%)
Query: 1 MRPNIVSEAGLSTRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVIS 60
MRPNIV+EAGL TR QWWESIPF TSAVV+VCG IYL+CLL GYDSFYEICFLP+AV+S
Sbjct: 1 MRPNIVTEAGLQTRVGQWWESIPFLTSAVVVVCGVIYLVCLLIGYDSFYEICFLPTAVVS 60
Query: 61 RFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLL 120
FQVYR YTSI FHGSLLHVLFNMLALVPLGSELERIMGS+R+ Y+ ILLAT+NAI HL
Sbjct: 61 HFQVYRIYTSIFFHGSLLHVLFNMLALVPLGSELERIMGSIRLAYLIILLATTNAIFHLF 120
Query: 121 IALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLI 180
IALLVAH PF+ Q ++DECAIGFSG++FS+IVIETSLSG QSRSVFGLFN+PAKWY I
Sbjct: 121 IALLVAHNPFHPYQYLLDECAIGFSGILFSMIVIETSLSGVQSRSVFGLFNVPAKWYAFI 180
Query: 181 LLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKF 240
LLV FQ+LMTNVSLLGHLCGILSGFAYTYG FN LMPG S +SAIE+SS LS+C+R+PKF
Sbjct: 181 LLVAFQLLMTNVSLLGHLCGILSGFAYTYGLFNFLMPGASSFSAIEASSWLSSCVRRPKF 240
Query: 241 ILCTGGNPSGYIPTYSGQNTSSSGLFSGNIWSNLSSWMPQRETSSQPTQDSRFPGRGRTL 300
ILCTGG+P+ YIPT+SGQNT+SSGL SGNIW NLSSWMPQRETS+Q QD RFPG GR L
Sbjct: 241 ILCTGGSPTSYIPTHSGQNTTSSGLLSGNIWRNLSSWMPQRETSAQAGQDYRFPGSGRAL 300
Query: 301 SSSQSP----VHVDSNLQARLLDNSSPENRSHMIVTETGDRLSDERQPALGTAVAV---- 352
S QS V+ DSNLQARLLDNS+P SH+ VT T + D R+ + AV
Sbjct: 301 GSGQSETVPAVNSDSNLQARLLDNSNPNRSSHLGVTATREPPLDGRRSVVDNAVGATPVH 360
Query: 353 -----DRVPAGQQV 361
D P+ +Q+
Sbjct: 361 PALHQDSAPSEEQI 374
>gi|359481109|ref|XP_002267146.2| PREDICTED: uncharacterized protein At3g58460-like [Vitis vinifera]
gi|296089310|emb|CBI39082.3| unnamed protein product [Vitis vinifera]
Length = 406
Score = 533 bits (1373), Expect = e-149, Method: Compositional matrix adjust.
Identities = 262/362 (72%), Positives = 304/362 (83%), Gaps = 2/362 (0%)
Query: 1 MRPNIVSEAGLSTRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVIS 60
MRPNIVSEAGL TR QWW++IPF TSAVVI+C IYL+CLL GYDSF EICF PSA+IS
Sbjct: 1 MRPNIVSEAGLRTRFGQWWDNIPFLTSAVVIICSIIYLVCLLVGYDSFVEICFSPSAIIS 60
Query: 61 RFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLL 120
+FQVYR YT+I+FHGSLLHVLFNM+ALVPLGSELERIMGSVR+FY+ +LLATSNAI H+L
Sbjct: 61 QFQVYRIYTAIIFHGSLLHVLFNMMALVPLGSELERIMGSVRLFYMIVLLATSNAIFHVL 120
Query: 121 IALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLI 180
IA LVA+ PFY +M+ECAIGFSG++FS+IVIETSLSGAQ+RSVFGLFN+PAKWY I
Sbjct: 121 IASLVAYNPFYSYHYLMNECAIGFSGILFSMIVIETSLSGAQTRSVFGLFNVPAKWYAWI 180
Query: 181 LLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKF 240
LLV+FQ+LMTNVSLLGHLCGILSGFAYTYG FN L+PGTSFYSAIESSSLLS+C+R+PKF
Sbjct: 181 LLVVFQLLMTNVSLLGHLCGILSGFAYTYGLFNFLIPGTSFYSAIESSSLLSSCVRRPKF 240
Query: 241 ILCTGGNPSGYIPTYSGQNTSSSGLFSGNIWSNLSSWMPQRETSSQPTQD-SRFPGRGRT 299
ILCTGGNP YIPT+S NTS SGL SGNIW NLSSWMPQR S+Q TQ+ SRFPGRGRT
Sbjct: 241 ILCTGGNPQAYIPTHSSSNTSPSGLISGNIWRNLSSWMPQRGMSTQATQESSRFPGRGRT 300
Query: 300 LSSSQSPVH-VDSNLQARLLDNSSPENRSHMIVTETGDRLSDERQPALGTAVAVDRVPAG 358
LSSS+S DS L+ARLLDNS+ ++ + T ++ DER+ ++ +A AV R A
Sbjct: 301 LSSSRSQTTPSDSTLEARLLDNSNLDHSLDVAANTTQQQVLDERRSSVDSAAAVARGNAH 360
Query: 359 QQ 360
Q
Sbjct: 361 DQ 362
>gi|255581586|ref|XP_002531598.1| Rhomboid protein, putative [Ricinus communis]
gi|223528794|gb|EEF30801.1| Rhomboid protein, putative [Ricinus communis]
Length = 397
Score = 530 bits (1365), Expect = e-148, Method: Compositional matrix adjust.
Identities = 266/365 (72%), Positives = 307/365 (84%), Gaps = 10/365 (2%)
Query: 1 MRPNIVSEAGLSTRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVIS 60
MRPNIV+EAGL TR QWWESIPF TSA+VIVCGTIYL CLL GYDSF+EICFLPSA+IS
Sbjct: 1 MRPNIVTEAGLPTRVGQWWESIPFLTSAIVIVCGTIYLACLLIGYDSFFEICFLPSAIIS 60
Query: 61 RFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLL 120
FQVYR YTSI+FHGSLLHV FNM+ALVPLGSELERIMGSVR+ Y+TILLATSNAI HL
Sbjct: 61 HFQVYRIYTSILFHGSLLHVFFNMMALVPLGSELERIMGSVRLLYLTILLATSNAIFHLF 120
Query: 121 IALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLI 180
IA LVAH PF+ Q++++ECAIGFSG++FS+IVIETSLSG QSRSVFGLFN+PAKWY I
Sbjct: 121 IATLVAHNPFHSDQHLINECAIGFSGILFSMIVIETSLSGVQSRSVFGLFNVPAKWYAFI 180
Query: 181 LLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKF 240
LLV+FQ+LMTNVSLLGHLCGILSGFAYTYG FN LMPG+SFYS+IE+SS LS+C+R+PKF
Sbjct: 181 LLVVFQLLMTNVSLLGHLCGILSGFAYTYGLFNFLMPGSSFYSSIEASSWLSSCVRRPKF 240
Query: 241 ILCTGGNPSGYIPTYSGQNTSSSGLFSGNIWSNLSSWMPQRETSSQPTQDSRFPGRGRTL 300
I+CTGGNP+ YIPTYS QN ++ GLFSGNIW NLSSWMPQRETSSQ T+D+RFPGRGRTL
Sbjct: 241 IMCTGGNPTAYIPTYSSQNMNTGGLFSGNIWRNLSSWMPQRETSSQSTEDNRFPGRGRTL 300
Query: 301 SSSQS----PVHVDSNLQARLLDNSSPENRSHMIVTETGDRLSDERQPALGTAVAVDRVP 356
SS+ S V DSNLQARLLDNS+ S++ T T RL+D G+ D V
Sbjct: 301 SSTGSQTIPAVSSDSNLQARLLDNSNSNLSSNLAATGTPGRLTD------GSFQGEDSVA 354
Query: 357 AGQQV 361
+ +++
Sbjct: 355 SDEEI 359
>gi|21593075|gb|AAM65024.1| unknown [Arabidopsis thaliana]
Length = 403
Score = 516 bits (1330), Expect = e-144, Method: Compositional matrix adjust.
Identities = 244/368 (66%), Positives = 303/368 (82%), Gaps = 11/368 (2%)
Query: 1 MRPNIVSEAGLSTRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVIS 60
MRPNIV+EAG+ TR QWW +IPF TS+VV+VCG IYLICLL GYD+FYE+CFLPSA+IS
Sbjct: 1 MRPNIVTEAGVQTRVGQWWNAIPFLTSSVVVVCGVIYLICLLTGYDTFYEVCFLPSAIIS 60
Query: 61 RFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLL 120
RFQVYRFYT+I+FHGSLLHVLFNM+ALVP+GSELERIMGSVR+ Y+T+LLAT+NA+LHLL
Sbjct: 61 RFQVYRFYTAIIFHGSLLHVLFNMMALVPMGSELERIMGSVRLLYLTVLLATTNAVLHLL 120
Query: 121 IALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLI 180
IA L + PFY+ ++M+ECAIGFSG++FS+IVIETSLSG SRSVFGLFN+PAK YP I
Sbjct: 121 IASLAGYNPFYQYDHLMNECAIGFSGILFSMIVIETSLSGVTSRSVFGLFNVPAKLYPWI 180
Query: 181 LLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKF 240
LL++FQ+LMTNVSLLGHLCGILSGF+Y+YG FN LMPG+SF++ IES+S +S+ IRQPKF
Sbjct: 181 LLIVFQLLMTNVSLLGHLCGILSGFSYSYGLFNFLMPGSSFFTTIESASWMSSFIRQPKF 240
Query: 241 ILCTGGNPSGYIPTYSGQNTSSSGLFSGNIWSNLSSWMPQRETSSQPTQDSRFPGRGRTL 300
I+CTGGNPS YIPTYS QNT+SSG +GN W +LSSW+PQRE S+Q ++DSRFPGRGRTL
Sbjct: 241 IMCTGGNPSSYIPTYSAQNTTSSGFSTGNAWRSLSSWLPQREASNQSSEDSRFPGRGRTL 300
Query: 301 SSSQSPV----HVDSNLQARLLDNSSPENRSHMIVTETGDRLSDERQPALGTAVAV---- 352
S+++ P D NL ARLL++SS +R + T + ++D RQ + A +
Sbjct: 301 STARDPTAPAGETDPNLHARLLEDSSSPDR---LSDATVNTVADSRQAPIANAAVLPQSQ 357
Query: 353 DRVPAGQQ 360
RV A ++
Sbjct: 358 GRVAASEE 365
>gi|356505467|ref|XP_003521512.1| PREDICTED: uncharacterized protein At3g58460-like [Glycine max]
Length = 414
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 260/363 (71%), Positives = 299/363 (82%), Gaps = 4/363 (1%)
Query: 1 MRPNIVSEAGLSTRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVIS 60
MRPNIVSEAG TR +QWWESIPF TSAVV+VCG IYLICLL GYDSFYE+CFLPSAV+S
Sbjct: 7 MRPNIVSEAGFPTRMSQWWESIPFLTSAVVVVCGVIYLICLLVGYDSFYEVCFLPSAVVS 66
Query: 61 RFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLL 120
RFQVYR YTSI+FHGSLLHV+FNM+ALVPLGSELERIMGSVR+ Y+ IL+ATSNAI H+L
Sbjct: 67 RFQVYRIYTSILFHGSLLHVVFNMMALVPLGSELERIMGSVRLLYVIILVATSNAIFHVL 126
Query: 121 IALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLI 180
IALLVAH P +M+ECAIGFSGV+FS+IVIETSLSG QSRSVFGLFN+PAKWY
Sbjct: 127 IALLVAHNPLLTYDYLMNECAIGFSGVLFSMIVIETSLSGVQSRSVFGLFNVPAKWYAFF 186
Query: 181 LLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKF 240
LLV+FQ+LM NVSLLGHLCGILSGFAYTYG FN L+PGTSFYS+IESSS S+C+R+PKF
Sbjct: 187 LLVVFQLLMQNVSLLGHLCGILSGFAYTYGLFNFLIPGTSFYSSIESSSWFSSCVRRPKF 246
Query: 241 ILCTGGNPSGYIPTYSGQNTSSSGLFSGNIWSNLSSWMPQRETSSQPTQDSRFPGRGRTL 300
I+CTGGNPSGYIPT++ QN+++SGL SGN+W NLSS+MPQRE S+Q T+DSRFPGRGRTL
Sbjct: 247 IVCTGGNPSGYIPTHTSQNSTTSGLLSGNVWRNLSSFMPQREVSAQSTEDSRFPGRGRTL 306
Query: 301 SSSQ----SPVHVDSNLQARLLDNSSPENRSHMIVTETGDRLSDERQPALGTAVAVDRVP 356
+ Q S +H DSNLQARLL++SSP + RLS+ R A A VP
Sbjct: 307 GAVQGQTASHLHSDSNLQARLLEDSSPNSPLDSSTPSNPQRLSEGRHSVDNVATAAAGVP 366
Query: 357 AGQ 359
Q
Sbjct: 367 QNQ 369
>gi|18410961|ref|NP_567064.1| rhomboid-like protein 15 [Arabidopsis thaliana]
gi|73921121|sp|Q8LB17.2|Y3846_ARATH RecName: Full=Uncharacterized protein At3g58460
gi|22531096|gb|AAM97052.1| putative protein [Arabidopsis thaliana]
gi|23197956|gb|AAN15505.1| putative protein [Arabidopsis thaliana]
gi|332646263|gb|AEE79784.1| rhomboid-like protein 15 [Arabidopsis thaliana]
Length = 403
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 243/368 (66%), Positives = 303/368 (82%), Gaps = 11/368 (2%)
Query: 1 MRPNIVSEAGLSTRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVIS 60
MRPNIV+EAG+ TR QWW +IPF TS+VV+VCG IYLICLL GYD+FYE+CFLPSA+IS
Sbjct: 1 MRPNIVTEAGVQTRVGQWWNAIPFLTSSVVVVCGVIYLICLLTGYDTFYEVCFLPSAIIS 60
Query: 61 RFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLL 120
RFQVYRFYT+I+FHGSLLHVLFNM+ALVP+GSELERIMGSVR+ Y+T+LLAT+NA+LHLL
Sbjct: 61 RFQVYRFYTAIIFHGSLLHVLFNMMALVPMGSELERIMGSVRLLYLTVLLATTNAVLHLL 120
Query: 121 IALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLI 180
IA L + PFY+ ++M+ECAIGFSG++FS+IVIETSLSG SRSVFGLFN+PAK YP I
Sbjct: 121 IASLAGYNPFYQYDHLMNECAIGFSGILFSMIVIETSLSGVTSRSVFGLFNVPAKLYPWI 180
Query: 181 LLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKF 240
LL++FQ+LMTNVSLLGHLCGILSGF+Y+YG FN LMPG+SF++ IES+S +S+ IR+PKF
Sbjct: 181 LLIVFQLLMTNVSLLGHLCGILSGFSYSYGLFNFLMPGSSFFTTIESASWMSSFIRRPKF 240
Query: 241 ILCTGGNPSGYIPTYSGQNTSSSGLFSGNIWSNLSSWMPQRETSSQPTQDSRFPGRGRTL 300
I+CTGGNPS YIPTYS QNT+SSG +GN W +LSSW+PQRE S+Q ++DSRFPGRGRTL
Sbjct: 241 IMCTGGNPSSYIPTYSAQNTTSSGFSTGNAWRSLSSWLPQREASNQSSEDSRFPGRGRTL 300
Query: 301 SSSQSPV----HVDSNLQARLLDNSSPENRSHMIVTETGDRLSDERQPALGTAVAV---- 352
S+++ P D NL ARLL++SS +R + T + ++D RQ + A +
Sbjct: 301 STARDPTAPAGETDPNLHARLLEDSSSPDR---LSDATVNTVADSRQAPIANAAVLPQSQ 357
Query: 353 DRVPAGQQ 360
RV A ++
Sbjct: 358 GRVAASEE 365
>gi|297820678|ref|XP_002878222.1| rhomboid family protein [Arabidopsis lyrata subsp. lyrata]
gi|297324060|gb|EFH54481.1| rhomboid family protein [Arabidopsis lyrata subsp. lyrata]
Length = 403
Score = 513 bits (1321), Expect = e-143, Method: Compositional matrix adjust.
Identities = 240/356 (67%), Positives = 298/356 (83%), Gaps = 7/356 (1%)
Query: 1 MRPNIVSEAGLSTRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVIS 60
MRPNIV+EAG+ TR QWW +IPF TS+VV+VCG IYLICLL GYD+FYE+CFLPSA+IS
Sbjct: 1 MRPNIVTEAGVQTRVGQWWNAIPFLTSSVVVVCGVIYLICLLTGYDTFYEVCFLPSAIIS 60
Query: 61 RFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLL 120
RFQVYRFYT+I+FHGSLLHVLFNM+ALVP+GSELERIMGSVR+ Y+TILLAT+NAILHL+
Sbjct: 61 RFQVYRFYTAIIFHGSLLHVLFNMMALVPMGSELERIMGSVRLLYLTILLATTNAILHLI 120
Query: 121 IALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLI 180
IA L + PFY+ ++M+ECAIGFSG++FS+IVIETSLSG SRSVFGLFN+PAK YP I
Sbjct: 121 IASLAGYNPFYQYDHLMNECAIGFSGILFSMIVIETSLSGVTSRSVFGLFNVPAKLYPWI 180
Query: 181 LLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKF 240
LL++FQ+LMTNVSLLGHLCGILSGF+Y+YG FN LMPG+SF++ IES+S +S+ +R+PKF
Sbjct: 181 LLIVFQLLMTNVSLLGHLCGILSGFSYSYGLFNFLMPGSSFFTTIESASWMSSFVRRPKF 240
Query: 241 ILCTGGNPSGYIPTYSGQNTSSSGLFSGNIWSNLSSWMPQRETSSQPTQDSRFPGRGRTL 300
I+CTGGNPS YIPTYS QNT+SSG +GN W +LSSW+PQRE S+Q ++DSRFPGRGRTL
Sbjct: 241 IMCTGGNPSSYIPTYSAQNTTSSGFSTGNAWRSLSSWLPQREASNQSSEDSRFPGRGRTL 300
Query: 301 SSSQSPV----HVDSNLQARLLDNSSPENRSHMIVTETGDRLSDERQPALGTAVAV 352
S+++ P D NL ARLL++SS +R + T + ++D RQ + A +
Sbjct: 301 STARDPAAPAGETDPNLHARLLEDSSSPDR---LSDATVNTMADSRQVPIANAAVL 353
>gi|227204337|dbj|BAH57020.1| AT3G58460 [Arabidopsis thaliana]
Length = 362
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 243/368 (66%), Positives = 302/368 (82%), Gaps = 10/368 (2%)
Query: 1 MRPNIVSEAGLSTRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVIS 60
MRPNIV+EAG+ TR QWW +IPF TS+VV+VCG IYLICLL GYD+FYE+CFLPSA+IS
Sbjct: 1 MRPNIVTEAGVQTRVGQWWNAIPFLTSSVVVVCGVIYLICLLTGYDTFYEVCFLPSAIIS 60
Query: 61 RFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLL 120
RFQVYRFYT+I+FHGSLLHVLFNM+ALVP+GSELERIMGSVR+ Y+T+LLAT+NA+LHLL
Sbjct: 61 RFQVYRFYTAIIFHGSLLHVLFNMMALVPMGSELERIMGSVRLLYLTVLLATTNAVLHLL 120
Query: 121 IALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLI 180
IA L + PFY+ ++M+ECAIGFSG++FS+IVIETSLSG SRSVFGLFN+PAK YP I
Sbjct: 121 IASLAGYNPFYQYDHLMNECAIGFSGILFSMIVIETSLSGVTSRSVFGLFNVPAKLYPWI 180
Query: 181 LLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKF 240
LL++FQ+LMTNVSLLGHLCGILSGF+Y+YG FN LMPG+SF++ IES+S +S+ IR+PKF
Sbjct: 181 LLIVFQLLMTNVSLLGHLCGILSGFSYSYGLFNFLMPGSSFFTTIESASWMSSFIRRPKF 240
Query: 241 ILCTGGNPSGYIPTYSGQNTSSSGLFSGNIWSNLSSWMPQRETSSQPTQDSRFPGRGRTL 300
I+CTGGNPS YIPTYS QNT+SSG +GN W +LSSW+PQRE S+Q ++DSRFPGRGRTL
Sbjct: 241 IMCTGGNPSSYIPTYSAQNTTSSGFSTGNAWRSLSSWLPQREASNQSSEDSRFPGRGRTL 300
Query: 301 SSSQSPV----HVDSNLQARLLDNSSPENRSHMIVTETGDRLSDERQPALGTAVAVDRVP 356
S+++ P D NL ARLL++SS +R + T + ++D RQ + A +P
Sbjct: 301 STARDPTAPAGETDPNLHARLLEDSSSPDR---LSDATVNTVADSRQAPIANAAV---LP 354
Query: 357 AGQQVFFI 364
Q F +
Sbjct: 355 QSQVTFLL 362
>gi|358348102|ref|XP_003638088.1| hypothetical protein MTR_118s0012 [Medicago truncatula]
gi|355504023|gb|AES85226.1| hypothetical protein MTR_118s0012 [Medicago truncatula]
Length = 403
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 253/362 (69%), Positives = 296/362 (81%), Gaps = 13/362 (3%)
Query: 1 MRPNIVSEAGLSTRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVIS 60
MRPNIV+EAGL TR NQWWE+IPFFTSAVVIVCG IY +CLL GYDSF EICFLPSAV+S
Sbjct: 1 MRPNIVTEAGLPTRVNQWWENIPFFTSAVVIVCGAIYFVCLLVGYDSFSEICFLPSAVVS 60
Query: 61 RFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLL 120
RFQVYR YT+I+FHGSLLHVLFNM+ALVPLGSELERIMGSVR+ Y+TILLATSNAI+H+
Sbjct: 61 RFQVYRIYTAILFHGSLLHVLFNMMALVPLGSELERIMGSVRLLYVTILLATSNAIIHVF 120
Query: 121 IALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLI 180
IALLVA+ P +M+ECAIGFSGV+FS+IVIETSLSG QSRSVFGLFN+PAKWY
Sbjct: 121 IALLVAYNPILTNGYLMNECAIGFSGVLFSMIVIETSLSGVQSRSVFGLFNVPAKWYAFF 180
Query: 181 LLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKF 240
LLV+FQ+LM NVSLLGHL GI+SGFAYT+G FN L+PGTSFYS+IE+SS LS+C+R+PKF
Sbjct: 181 LLVVFQLLMQNVSLLGHLSGIVSGFAYTFGLFNFLIPGTSFYSSIEASSWLSSCVRRPKF 240
Query: 241 ILCTGGNPSGYIPTYSGQNTSSSGLFSGNIWSNLSSWMPQRETSSQP--TQDSRFPGRGR 298
I+CTGGNPSGYIPT + +++SG+FSGNIW NLSS MPQRE S+QP +DSRFPGRGR
Sbjct: 241 IVCTGGNPSGYIPTNTSSYSTTSGIFSGNIWRNLSSLMPQREVSTQPQSVEDSRFPGRGR 300
Query: 299 TLSSSQ----SPVHVDSNLQARLLDNSSPENRSHMIVTETGDRLSDERQPALGTAVAVDR 354
TL+++Q S H DSNLQARLL+++SP + S + T R P A
Sbjct: 301 TLAAAQGQNASGFHPDSNLQARLLEDNSPNHLSDPAILST-------RHPVDNVATTGAA 353
Query: 355 VP 356
VP
Sbjct: 354 VP 355
>gi|356570925|ref|XP_003553633.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
At3g58460-like [Glycine max]
Length = 415
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 254/346 (73%), Positives = 293/346 (84%), Gaps = 4/346 (1%)
Query: 1 MRPNIVSEAGLSTRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVIS 60
MRPNIVSEAGL TR +QWWESIPF TSAVV+VCG IYL+CLL GYDSF E+CFLPSAV+S
Sbjct: 7 MRPNIVSEAGLPTRMSQWWESIPFLTSAVVVVCGIIYLVCLLVGYDSFNEVCFLPSAVVS 66
Query: 61 RFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLL 120
RFQVYR YTSI+FHGSLLHV+FNM+ALVPLGSELERIMGSVR+ Y+ IL+ATSNAI H+L
Sbjct: 67 RFQVYRIYTSILFHGSLLHVVFNMMALVPLGSELERIMGSVRLLYVIILVATSNAIFHVL 126
Query: 121 IALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLI 180
IALLVAH P +M+ECAIGFSGV+FS+IVIETSLSG QSRSVFGLFN+PAKWY
Sbjct: 127 IALLVAHNPLLTYDYLMNECAIGFSGVLFSMIVIETSLSGVQSRSVFGLFNVPAKWYAFF 186
Query: 181 LLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKF 240
LLV+FQ+LM NVSLLGHLCGILSGFAYTYG FN L+PGTSFYS+IESSS LS+C+R+PKF
Sbjct: 187 LLVVFQLLMQNVSLLGHLCGILSGFAYTYGLFNFLIPGTSFYSSIESSSWLSSCVRRPKF 246
Query: 241 ILCTGGNPSGYIPTYSGQNTSSSGLFSGNIWSNLSSWMPQRETSSQPTQDSRFPGRGRTL 300
I+CTGGNPSGYIPT + QN+++SGL SGNIW NLSS+MPQRE S+Q T+D RFPGRGRTL
Sbjct: 247 IVCTGGNPSGYIPTQTSQNSTTSGLLSGNIWRNLSSFMPQREVSAQSTEDIRFPGRGRTL 306
Query: 301 SSSQ----SPVHVDSNLQARLLDNSSPENRSHMIVTETGDRLSDER 342
+ Q S +H DSNLQARLL++SSP + +LS+ R
Sbjct: 307 GAVQGQTASHLHSDSNLQARLLEDSSPNSPLDSSTPSNTQQLSEGR 352
>gi|334186083|ref|NP_001190126.1| rhomboid-like protein 15 [Arabidopsis thaliana]
gi|332646264|gb|AEE79785.1| rhomboid-like protein 15 [Arabidopsis thaliana]
Length = 426
Score = 500 bits (1287), Expect = e-139, Method: Compositional matrix adjust.
Identities = 236/360 (65%), Positives = 295/360 (81%), Gaps = 11/360 (3%)
Query: 9 AGLSTRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFY 68
AG+ TR QWW +IPF TS+VV+VCG IYLICLL GYD+FYE+CFLPSA+ISRFQVYRFY
Sbjct: 32 AGVQTRVGQWWNAIPFLTSSVVVVCGVIYLICLLTGYDTFYEVCFLPSAIISRFQVYRFY 91
Query: 69 TSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHI 128
T+I+FHGSLLHVLFNM+ALVP+GSELERIMGSVR+ Y+T+LLAT+NA+LHLLIA L +
Sbjct: 92 TAIIFHGSLLHVLFNMMALVPMGSELERIMGSVRLLYLTVLLATTNAVLHLLIASLAGYN 151
Query: 129 PFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVL 188
PFY+ ++M+ECAIGFSG++FS+IVIETSLSG SRSVFGLFN+PAK YP ILL++FQ+L
Sbjct: 152 PFYQYDHLMNECAIGFSGILFSMIVIETSLSGVTSRSVFGLFNVPAKLYPWILLIVFQLL 211
Query: 189 MTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFILCTGGNP 248
MTNVSLLGHLCGILSGF+Y+YG FN LMPG+SF++ IES+S +S+ IR+PKFI+CTGGNP
Sbjct: 212 MTNVSLLGHLCGILSGFSYSYGLFNFLMPGSSFFTTIESASWMSSFIRRPKFIMCTGGNP 271
Query: 249 SGYIPTYSGQNTSSSGLFSGNIWSNLSSWMPQRETSSQPTQDSRFPGRGRTLSSSQSPV- 307
S YIPTYS QNT+SSG +GN W +LSSW+PQRE S+Q ++DSRFPGRGRTLS+++ P
Sbjct: 272 SSYIPTYSAQNTTSSGFSTGNAWRSLSSWLPQREASNQSSEDSRFPGRGRTLSTARDPTA 331
Query: 308 ---HVDSNLQARLLDNSSPENRSHMIVTETGDRLSDERQPALGTAVAV----DRVPAGQQ 360
D NL ARLL++SS +R + T + ++D RQ + A + RV A ++
Sbjct: 332 PAGETDPNLHARLLEDSSSPDR---LSDATVNTVADSRQAPIANAAVLPQSQGRVAASEE 388
>gi|449459580|ref|XP_004147524.1| PREDICTED: uncharacterized protein At3g58460-like [Cucumis sativus]
Length = 397
Score = 496 bits (1278), Expect = e-138, Method: Compositional matrix adjust.
Identities = 244/365 (66%), Positives = 292/365 (80%), Gaps = 19/365 (5%)
Query: 1 MRPNIVSEAGLSTRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVIS 60
MR NIV+EAGL TR QWWE IPFFTS+++++CGTIYL+CLL GYDSF E+CFLP A++S
Sbjct: 1 MRSNIVTEAGLPTRMGQWWEGIPFFTSSIILICGTIYLVCLLVGYDSFVEVCFLPVAILS 60
Query: 61 RFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLL 120
FQVYR +TS++FHGSLLHVLFNMLALVPLGSELERIMGS+RM Y+TILLA SNAI+HL
Sbjct: 61 HFQVYRIFTSVLFHGSLLHVLFNMLALVPLGSELERIMGSIRMLYLTILLAISNAIIHLF 120
Query: 121 IALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLI 180
IA+++AH PF+ N+M+ECAIGFSG++FSLIVIETSLSG QSRSVFGLFN+PA+WY I
Sbjct: 121 IAVVMAHNPFHHYDNLMNECAIGFSGILFSLIVIETSLSGIQSRSVFGLFNVPAQWYVWI 180
Query: 181 LLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKF 240
LLV+FQ+LMTNVS LGHLCGI++GFAY YG N L+PGT+FYSA+ESSSLLS+C+R+PKF
Sbjct: 181 LLVVFQLLMTNVSFLGHLCGIITGFAYIYGLLNFLLPGTAFYSAMESSSLLSSCVRRPKF 240
Query: 241 ILCTGGNPSGYIPTYSGQNTSSSGLFSGNIWSNLSSWMPQRETSSQP-TQDSRFPGRGRT 299
ILCTGGNPS +PTYS QNT+S+ L N+W NLSSWMP+RET ++P QD+RFPGRGRT
Sbjct: 241 ILCTGGNPSAQLPTYSDQNTTSNSLSVPNVWRNLSSWMPRRETVTEPQQQDNRFPGRGRT 300
Query: 300 LSSS--QSPVHVDS--NLQARLLDNSSPENRSHMIVTETGDRLSDERQPALGTAVAVDRV 355
L S+ QS DS NLQ RLLD SS + +S SD RQ + VDR
Sbjct: 301 LGSAQNQSAPADDSEFNLQTRLLDRSSADRQS-----------SDGRQ---NDSAVVDRA 346
Query: 356 PAGQQ 360
Q
Sbjct: 347 TPMQN 351
>gi|449518911|ref|XP_004166479.1| PREDICTED: uncharacterized protein At3g58460-like [Cucumis sativus]
Length = 344
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 231/331 (69%), Positives = 280/331 (84%), Gaps = 5/331 (1%)
Query: 2 RPNIVSEAGLSTRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISR 61
R + + +AGL TR QWWE IPFFTS+++++CGTIYL+CLL GYDSF E+CFLP A++S
Sbjct: 10 RSDTILKAGLPTRMGQWWEGIPFFTSSIILICGTIYLVCLLVGYDSFVEVCFLPVAILSH 69
Query: 62 FQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLI 121
FQVYR +TS++FHGSLLHVLFNMLALVPLGSELERIMGS+RM Y+TILLA SNAI+HL I
Sbjct: 70 FQVYRIFTSVLFHGSLLHVLFNMLALVPLGSELERIMGSIRMLYLTILLAISNAIIHLFI 129
Query: 122 ALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLIL 181
A+++AH PF+ N+M+ECAIGFSG++FSLIVIETSLSG QSRSVFGLFN+PA+WY IL
Sbjct: 130 AVVMAHNPFHHYDNLMNECAIGFSGILFSLIVIETSLSGIQSRSVFGLFNVPAQWYVWIL 189
Query: 182 LVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFI 241
LV+FQ+LMTNVS LGHLCGI++GFAY YG N L+PGT+FYSA+ESSSLLS+C+R+PKFI
Sbjct: 190 LVVFQLLMTNVSFLGHLCGIITGFAYIYGLLNFLLPGTAFYSAMESSSLLSSCVRRPKFI 249
Query: 242 LCTGGNPSGYIPTYSGQNTSSSGLFSGNIWSNLSSWMPQRETSSQP-TQDSRFPGRGRTL 300
LCTGGNPS +PTYS QNT+S+ L N+W NLSSWMP+RET ++P QD+RFPGRGRTL
Sbjct: 250 LCTGGNPSAQLPTYSDQNTTSNSLSVPNVWRNLSSWMPRRETVTEPQQQDNRFPGRGRTL 309
Query: 301 SSS--QSPVHVDS--NLQARLLDNSSPENRS 327
S+ QS DS NLQ RLLD SS + +S
Sbjct: 310 GSAQNQSAPADDSEFNLQTRLLDRSSADRQS 340
>gi|242033515|ref|XP_002464152.1| hypothetical protein SORBIDRAFT_01g013170 [Sorghum bicolor]
gi|241918006|gb|EER91150.1| hypothetical protein SORBIDRAFT_01g013170 [Sorghum bicolor]
Length = 396
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 221/329 (67%), Positives = 264/329 (80%), Gaps = 4/329 (1%)
Query: 1 MRPNIVSEAGLSTRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVIS 60
MRPNI++EAG+ TR NQWW SIPF TS VV++CG IYL+CLL GYDS+ EICFLPSAV S
Sbjct: 1 MRPNIITEAGIPTRLNQWWSSIPFVTSGVVLICGVIYLLCLLIGYDSYAEICFLPSAVAS 60
Query: 61 RFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLL 120
FQVYRFYTS++FHGSLLHVLFNMLALVPLG+ELERIMGSVR+ ++ LLAT+NAILHL
Sbjct: 61 HFQVYRFYTSVLFHGSLLHVLFNMLALVPLGTELERIMGSVRLLFLMFLLATTNAILHLT 120
Query: 121 IALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLI 180
IA LVA+ P + + N+++EC+IGFSGVIFS+IVIETSLSG QSRSVFGLFN+PAKWY I
Sbjct: 121 IAFLVAYNPLFPVPNLVNECSIGFSGVIFSMIVIETSLSGVQSRSVFGLFNVPAKWYAWI 180
Query: 181 LLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKF 240
LLVLFQ L +NVSLLGHLCGILSGFAYTYG FN L+PG SFYS IE S LS C+R+P F
Sbjct: 181 LLVLFQFLASNVSLLGHLCGILSGFAYTYGLFNYLLPGPSFYSKIEGLSALSVCVRRPGF 240
Query: 241 ILCTGGNPSGYIPTYSGQNTSSSGLFSGNIWSNLSSWMPQRET-SSQPTQDSRFPGRGRT 299
I+CTGG G +PTYS + + S L +GN N+SSWMP R T ++Q +D RFPGR RT
Sbjct: 241 IMCTGGTTYGQLPTYSNTSAAPSALINGNFLRNISSWMPSRHTATAQEGEDPRFPGRART 300
Query: 300 LSSS---QSPVHVDSNLQARLLDNSSPEN 325
L S+ + ++L ARLLDN++P +
Sbjct: 301 LGSAGTEPTAREASAHLHARLLDNTTPSD 329
>gi|223942663|gb|ACN25415.1| unknown [Zea mays]
gi|414872103|tpg|DAA50660.1| TPA: rhomboid family protein [Zea mays]
Length = 396
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 230/363 (63%), Positives = 275/363 (75%), Gaps = 15/363 (4%)
Query: 1 MRPNIVSEAGLSTRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVIS 60
MRPNI++EAG+ TR NQWW SIPF TS V+++CG IYL+CLL GYDS+ EICFLPSAV S
Sbjct: 1 MRPNIITEAGIPTRLNQWWSSIPFVTSGVILICGVIYLLCLLIGYDSYVEICFLPSAVAS 60
Query: 61 RFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLL 120
FQVYRFYTS++FHGSLLHVLFNMLALVPLG+ELERIMGSVR+ ++ +LLAT+NAILHL
Sbjct: 61 HFQVYRFYTSVLFHGSLLHVLFNMLALVPLGTELERIMGSVRLLFLMLLLATTNAILHLT 120
Query: 121 IALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLI 180
IA LVA+ P Y + N+++EC+IGFSGVIFS+IVIETSLSG QSRSVFGLFN+PAKWY I
Sbjct: 121 IAFLVAYNPLYHVPNLVNECSIGFSGVIFSMIVIETSLSGVQSRSVFGLFNVPAKWYAWI 180
Query: 181 LLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKF 240
LLVLFQ L +NVSLLGHLCGILSGFAYTYG FN L+PG SFYS IE S LS C+R+P F
Sbjct: 181 LLVLFQFLASNVSLLGHLCGILSGFAYTYGLFNYLLPGPSFYSKIEGLSALSVCVRRPGF 240
Query: 241 ILCTGGNPSGYIPTYSGQNTSSSGLFSGNIWSNLSSWMPQRETSS-QPTQDSRFPGRGRT 299
I+CTGG G +PTYS + + S L +GN N+SSWMP R TS+ Q +D RFPGR RT
Sbjct: 241 IMCTGGTTYGQLPTYSNTSAAPSALINGNFLRNISSWMPSRHTSTAQEGEDPRFPGRART 300
Query: 300 LSS---SQSPVHVDSNLQARLLDNSSPENRSHMIVTETGDRLSDERQPALGTAVAVDRVP 356
L S + ++L ARLLDN++P D L++ + A+ T A V
Sbjct: 301 LGSVGTEPTAREASAHLHARLLDNTTPS-----------DPLTNTQHTAVNTVRADATVT 349
Query: 357 AGQ 359
A Q
Sbjct: 350 AEQ 352
>gi|195627118|gb|ACG35389.1| rhomboid family protein [Zea mays]
Length = 396
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 229/363 (63%), Positives = 275/363 (75%), Gaps = 15/363 (4%)
Query: 1 MRPNIVSEAGLSTRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVIS 60
MRPNI++EAG+ TR NQWW SIPF TS V+++CG IYL+CLL GYDS+ EICFLPSAV S
Sbjct: 1 MRPNIITEAGIPTRLNQWWSSIPFVTSGVILICGVIYLLCLLIGYDSYVEICFLPSAVAS 60
Query: 61 RFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLL 120
FQVYRFYTS++FHGSLLHVLFNMLALVPLG+ELERIMGSVR+ ++ +LLAT+NAILHL
Sbjct: 61 HFQVYRFYTSVLFHGSLLHVLFNMLALVPLGTELERIMGSVRLLFLMLLLATTNAILHLT 120
Query: 121 IALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLI 180
IA LVA+ P Y + N+++EC+IGFSGVIFS+IVIETSLSG QSRSVFGLFN+PAKWY I
Sbjct: 121 IAFLVAYNPLYHVPNLVNECSIGFSGVIFSMIVIETSLSGVQSRSVFGLFNVPAKWYAWI 180
Query: 181 LLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKF 240
LLVLFQ L +NVSLLGHLCGILSGFAYTYG FN L+PG SFYS IE S LS C+R+P F
Sbjct: 181 LLVLFQFLASNVSLLGHLCGILSGFAYTYGLFNYLLPGPSFYSKIEGLSALSVCVRRPGF 240
Query: 241 ILCTGGNPSGYIPTYSGQNTSSSGLFSGNIWSNLSSWMPQRETSS-QPTQDSRFPGRGRT 299
I+CTGG G +PTYS + + S L +GN N+SSWMP R S+ Q +D+RFPGR RT
Sbjct: 241 IMCTGGTTYGQLPTYSNTSAAPSALINGNFLRNISSWMPSRHISTAQEGEDTRFPGRART 300
Query: 300 LSS---SQSPVHVDSNLQARLLDNSSPENRSHMIVTETGDRLSDERQPALGTAVAVDRVP 356
L S + ++L ARLLDN++P D L++ + A+ T A V
Sbjct: 301 LGSVGTEPTAREASAHLHARLLDNTTPS-----------DPLTNTQHTAVNTVRADATVT 349
Query: 357 AGQ 359
A Q
Sbjct: 350 AEQ 352
>gi|414872102|tpg|DAA50659.1| TPA: hypothetical protein ZEAMMB73_465757 [Zea mays]
Length = 390
Score = 452 bits (1164), Expect = e-125, Method: Compositional matrix adjust.
Identities = 230/363 (63%), Positives = 275/363 (75%), Gaps = 15/363 (4%)
Query: 1 MRPNIVSEAGLSTRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVIS 60
MRPNI++EAG+ TR NQWW SIPF TS V+++CG IYL+CLL GYDS+ EICFLPSAV S
Sbjct: 1 MRPNIITEAGIPTRLNQWWSSIPFVTSGVILICGVIYLLCLLIGYDSYVEICFLPSAVAS 60
Query: 61 RFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLL 120
FQVYRFYTS++FHGSLLHVLFNMLALVPLG+ELERIMGSVR+ ++ +LLAT+NAILHL
Sbjct: 61 HFQVYRFYTSVLFHGSLLHVLFNMLALVPLGTELERIMGSVRLLFLMLLLATTNAILHLT 120
Query: 121 IALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLI 180
IA LVA+ P Y + N+++EC+IGFSGVIFS+IVIETSLSG QSRSVFGLFN+PAKWY I
Sbjct: 121 IAFLVAYNPLYHVPNLVNECSIGFSGVIFSMIVIETSLSGVQSRSVFGLFNVPAKWYAWI 180
Query: 181 LLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKF 240
LLVLFQ L +NVSLLGHLCGILSGFAYTYG FN L+PG SFYS IE S LS C+R+P F
Sbjct: 181 LLVLFQFLASNVSLLGHLCGILSGFAYTYGLFNYLLPGPSFYSKIEGLSALSVCVRRPGF 240
Query: 241 ILCTGGNPSGYIPTYSGQNTSSSGLFSGNIWSNLSSWMPQRETSS-QPTQDSRFPGRGRT 299
I+CTGG G +PTYS + + S L +GN N+SSWMP R TS+ Q +D RFPGR RT
Sbjct: 241 IMCTGGTTYGQLPTYSNTSAAPSALINGNFLRNISSWMPSRHTSTAQEGEDPRFPGRART 300
Query: 300 LSS---SQSPVHVDSNLQARLLDNSSPENRSHMIVTETGDRLSDERQPALGTAVAVDRVP 356
L S + ++L ARLLDN++P D L++ + A+ T A V
Sbjct: 301 LGSVGTEPTAREASAHLHARLLDNTTPS-----------DPLTNTQHTAVNTVRADATVT 349
Query: 357 AGQ 359
A Q
Sbjct: 350 AEQ 352
>gi|326500926|dbj|BAJ95129.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 401
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 227/372 (61%), Positives = 270/372 (72%), Gaps = 20/372 (5%)
Query: 1 MRPNIVSEAGLSTRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVIS 60
MRPNIV+EAG+STR NQWW S PF TS V I+C IYL+CLL GYDS+ EICFLPSAV S
Sbjct: 1 MRPNIVTEAGISTRLNQWWSSTPFITSGVTIICAAIYLVCLLIGYDSYAEICFLPSAVAS 60
Query: 61 RFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLL 120
FQVYRFYTS++FHGSLLHVLFNML VPLG+ELERIMGSVR+ ++ LLAT+NAI HL+
Sbjct: 61 HFQVYRFYTSVLFHGSLLHVLFNMLTFVPLGTELERIMGSVRLLFLMFLLATTNAIFHLI 120
Query: 121 IALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLI 180
+A LV + P Y + ++DEC+IGFSGVIFS+IVIETSLSG Q RSVFGLFN+PAKWY I
Sbjct: 121 VAFLVDYNPLYHVSYLVDECSIGFSGVIFSMIVIETSLSGVQYRSVFGLFNVPAKWYAWI 180
Query: 181 LLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKF 240
LL+LFQ L +NVSLLGHL GILSGFAYTYG FN L+PG SFYS+IE S+LS C+R+P F
Sbjct: 181 LLILFQFLASNVSLLGHLSGILSGFAYTYGLFNYLLPGPSFYSSIEGLSMLSVCVRRPGF 240
Query: 241 ILCTGGNPSGYIPTYSGQNTSSSGLFSGNIWSNLSSWMPQRETSS------QPTQDSRFP 294
ILCTGG G +PT+S +T S L + N N+SSWMP R TS+ Q +D RFP
Sbjct: 241 ILCTGGTTHGQLPTHSNMSTPPSSLINANFLRNISSWMPSRRTSTVQTSTNQEQEDPRFP 300
Query: 295 GRGRTLSSS---QSPVHVDSNLQARLLDNSSPENRSHMIVTETGDRLSDERQPALGTAVA 351
GRGRTL+S+ + +NL ARLLDNS+P D L++ + A T A
Sbjct: 301 GRGRTLASTGTEPTAREASANLHARLLDNSTPS-----------DLLTNSQHAAANTVRA 349
Query: 352 VDRVPAGQQVFF 363
V A Q F
Sbjct: 350 DATVTADQTDTF 361
>gi|357119970|ref|XP_003561705.1| PREDICTED: uncharacterized protein At3g58460-like [Brachypodium
distachyon]
Length = 403
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 218/336 (64%), Positives = 269/336 (80%), Gaps = 11/336 (3%)
Query: 1 MRPNIVSEAGLSTRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVIS 60
MRPNI++EAG++TR NQWW S PF TS V+++CG IYL+CLL GYDS+ EICFLPSAV S
Sbjct: 1 MRPNIITEAGITTRFNQWWSSTPFITSGVILICGAIYLVCLLIGYDSYREICFLPSAVAS 60
Query: 61 RFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLL 120
FQVYRFYTS++FHGSLLHVLFNML L PLG+ELERIMGSVR+ ++ LLAT+NA+LHL+
Sbjct: 61 HFQVYRFYTSVLFHGSLLHVLFNMLTLAPLGTELERIMGSVRLLFLMFLLATTNAVLHLI 120
Query: 121 IALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLI 180
+A LVA+ P Y + +++DEC+IGFSGV+FS+IVIETSLSG QSRSVFGLFNIPAKWY I
Sbjct: 121 VAFLVAYNPLYPVPSLVDECSIGFSGVLFSMIVIETSLSGVQSRSVFGLFNIPAKWYAWI 180
Query: 181 LLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKF 240
LL+LFQ L +NVSLLGHL GILSGFAYTYG FN L+PG SFYS+IE SLLS C+R+P F
Sbjct: 181 LLILFQFLASNVSLLGHLSGILSGFAYTYGLFNYLLPGPSFYSSIEGLSLLSICVRRPGF 240
Query: 241 ILCTGGNPSGYIPTYSGQNTSS--SGLFSGNIWSNLSSWMPQRETS------SQPTQDSR 292
ILCTGG G +PT+ +TS+ S L +GN+ N+SSW+P R+TS +Q +D R
Sbjct: 241 ILCTGGTTYGQLPTHYNMSTSTAPSSLINGNLLRNISSWIPSRQTSTTEASPTQEQEDPR 300
Query: 293 FPGRGRTLSSS---QSPVHVDSNLQARLLDNSSPEN 325
FPGRGRTL+S+ + +NL ARLLDN++P +
Sbjct: 301 FPGRGRTLASTGTEPTAREASANLHARLLDNTTPSD 336
>gi|108710127|gb|ABF97922.1| expressed protein [Oryza sativa Japonica Group]
Length = 379
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 228/368 (61%), Positives = 272/368 (73%), Gaps = 19/368 (5%)
Query: 1 MRPNIVSEAGLSTRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVIS 60
MRPN+++EAG+STR NQWW SIPF TS V+++CG IYL+CLL GYDSF EICFLPS V S
Sbjct: 1 MRPNVITEAGISTRLNQWWGSIPFITSGVILICGAIYLVCLLTGYDSFAEICFLPSVVAS 60
Query: 61 RFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLL 120
RFQVYRFYTS+VFHGSLLHVLFNMLALVPLG+ELERIMGSVR+ ++ LLAT+NAI HL+
Sbjct: 61 RFQVYRFYTSVVFHGSLLHVLFNMLALVPLGTELERIMGSVRLLFLMFLLATTNAIFHLI 120
Query: 121 IALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLI 180
IA L A+ P Y L ++DEC+IGFSGVIFS+IVIETSLSG Q+RSVFGLFN+PA WY I
Sbjct: 121 IAFLAAYNPLYPLHFLVDECSIGFSGVIFSMIVIETSLSGVQTRSVFGLFNVPANWYAWI 180
Query: 181 LLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKF 240
LLVLFQ L +NVSLLGHLCGILSGFAYTYG FN L+PG SFYS+IE S+LS C+R+P F
Sbjct: 181 LLVLFQFLASNVSLLGHLCGILSGFAYTYGLFNYLLPGPSFYSSIEGLSVLSVCVRRPGF 240
Query: 241 ILCTGGNPSGYIPTYSGQNTSSSGLFSGNIWSNLSSWMPQR----ETSSQPTQDSRFPGR 296
ILCTGG G +PT+S +T+ S L + N N+SSW+P R + QD RFPGR
Sbjct: 241 ILCTGGTTYGQLPTFSNTSTAPSALINANFLRNISSWIPSRQTTTTQGNTQEQDPRFPGR 300
Query: 297 GRTLSSS---QSPVHVDSNLQARLLDNSSPENRSHMIVTETGDRLSDERQPALGTAVAVD 353
RTLSS+ + +NL A LLD+++P D L+ + PA T V D
Sbjct: 301 ARTLSSAGTEPTAREASANLHASLLDSTTPS-----------DPLTSSQHPAANT-VRAD 348
Query: 354 RVPAGQQV 361
A QV
Sbjct: 349 ATVAADQV 356
>gi|31712095|gb|AAP68399.1| unknown protein [Oryza sativa Japonica Group]
gi|108710126|gb|ABF97921.1| expressed protein [Oryza sativa Japonica Group]
gi|218193411|gb|EEC75838.1| hypothetical protein OsI_12827 [Oryza sativa Indica Group]
gi|222625474|gb|EEE59606.1| hypothetical protein OsJ_11927 [Oryza sativa Japonica Group]
Length = 399
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 228/368 (61%), Positives = 272/368 (73%), Gaps = 19/368 (5%)
Query: 1 MRPNIVSEAGLSTRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVIS 60
MRPN+++EAG+STR NQWW SIPF TS V+++CG IYL+CLL GYDSF EICFLPS V S
Sbjct: 1 MRPNVITEAGISTRLNQWWGSIPFITSGVILICGAIYLVCLLTGYDSFAEICFLPSVVAS 60
Query: 61 RFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLL 120
RFQVYRFYTS+VFHGSLLHVLFNMLALVPLG+ELERIMGSVR+ ++ LLAT+NAI HL+
Sbjct: 61 RFQVYRFYTSVVFHGSLLHVLFNMLALVPLGTELERIMGSVRLLFLMFLLATTNAIFHLI 120
Query: 121 IALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLI 180
IA L A+ P Y L ++DEC+IGFSGVIFS+IVIETSLSG Q+RSVFGLFN+PA WY I
Sbjct: 121 IAFLAAYNPLYPLHFLVDECSIGFSGVIFSMIVIETSLSGVQTRSVFGLFNVPANWYAWI 180
Query: 181 LLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKF 240
LLVLFQ L +NVSLLGHLCGILSGFAYTYG FN L+PG SFYS+IE S+LS C+R+P F
Sbjct: 181 LLVLFQFLASNVSLLGHLCGILSGFAYTYGLFNYLLPGPSFYSSIEGLSVLSVCVRRPGF 240
Query: 241 ILCTGGNPSGYIPTYSGQNTSSSGLFSGNIWSNLSSWMPQR----ETSSQPTQDSRFPGR 296
ILCTGG G +PT+S +T+ S L + N N+SSW+P R + QD RFPGR
Sbjct: 241 ILCTGGTTYGQLPTFSNTSTAPSALINANFLRNISSWIPSRQTTTTQGNTQEQDPRFPGR 300
Query: 297 GRTLSSS---QSPVHVDSNLQARLLDNSSPENRSHMIVTETGDRLSDERQPALGTAVAVD 353
RTLSS+ + +NL A LLD+++P D L+ + PA T V D
Sbjct: 301 ARTLSSAGTEPTAREASANLHASLLDSTTPS-----------DPLTSSQHPAANT-VRAD 348
Query: 354 RVPAGQQV 361
A QV
Sbjct: 349 ATVAADQV 356
>gi|6735363|emb|CAB68184.1| putative protein [Arabidopsis thaliana]
Length = 411
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 224/383 (58%), Positives = 287/383 (74%), Gaps = 33/383 (8%)
Query: 1 MRPNIVSEAGLSTRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVIS 60
MRPNIV+EAG+ TR QWW +IPF TS+VV+VCG IYLICLL GYD+FYE+CFLPSA+IS
Sbjct: 1 MRPNIVTEAGVQTRVGQWWNAIPFLTSSVVVVCGVIYLICLLTGYDTFYEVCFLPSAIIS 60
Query: 61 RFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLL 120
RFQVYRFYT+I+FHGSLLHVLFNM+ALVP+GSELERIMGSVR+ Y+T+LLAT+NA+LHLL
Sbjct: 61 RFQVYRFYTAIIFHGSLLHVLFNMMALVPMGSELERIMGSVRLLYLTVLLATTNAVLHLL 120
Query: 121 IALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLI 180
IA L + PFY+ ++M+ECAIGFSG++FS+IVIETSLSG SRSVFGLFN+PAK YP I
Sbjct: 121 IASLAGYNPFYQYDHLMNECAIGFSGILFSMIVIETSLSGVTSRSVFGLFNVPAKLYPWI 180
Query: 181 LLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSS---LLSTCIRQ 237
LL++FQ+LMTNVSLLGHLCGILSGF+Y+YG FN LMPG+SF++ IES+S +++ +
Sbjct: 181 LLIVFQLLMTNVSLLGHLCGILSGFSYSYGLFNFLMPGSSFFTTIESASWMLIVTHPVSM 240
Query: 238 PKFILCTGGNPS------GYIPT------YSGQNTSSSGLFSGNIWSNLSSWMPQRETSS 285
L + G+PS G +P + Q+ GN W +LSSW+PQRE S+
Sbjct: 241 SSSSLASLGDPSSLCVLAGILPAIFPLILHKTQH-------PGNAWRSLSSWLPQREASN 293
Query: 286 QPTQDSRFPGRGRTLSSSQSPV----HVDSNLQARLLDNSSPENRSHMIVTETGDRLSDE 341
Q ++DSRFPGRGRTLS+++ P D NL ARLL++SS +R + T + ++D
Sbjct: 294 QSSEDSRFPGRGRTLSTARDPTAPAGETDPNLHARLLEDSSSPDR---LSDATVNTVADS 350
Query: 342 RQPALGTAVAV----DRVPAGQQ 360
RQ + A + RV A ++
Sbjct: 351 RQAPIANAAVLPQSQGRVAASEE 373
>gi|414872101|tpg|DAA50658.1| TPA: hypothetical protein ZEAMMB73_465757 [Zea mays]
Length = 381
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 222/350 (63%), Positives = 266/350 (76%), Gaps = 3/350 (0%)
Query: 1 MRPNIVSEAGLSTRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVIS 60
MRPNI++EAG+ TR NQWW SIPF TS V+++CG IYL+CLL GYDS+ EICFLPSAV S
Sbjct: 1 MRPNIITEAGIPTRLNQWWSSIPFVTSGVILICGVIYLLCLLIGYDSYVEICFLPSAVAS 60
Query: 61 RFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLL 120
FQVYRFYTS++FHGSLLHVLFNMLALVPLG+ELERIMGSVR+ ++ +LLAT+NAILHL
Sbjct: 61 HFQVYRFYTSVLFHGSLLHVLFNMLALVPLGTELERIMGSVRLLFLMLLLATTNAILHLT 120
Query: 121 IALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLI 180
IA LVA+ P Y + N+++EC+IGFSGVIFS+IVIETSLSG QSRSVFGLFN+PAKWY I
Sbjct: 121 IAFLVAYNPLYHVPNLVNECSIGFSGVIFSMIVIETSLSGVQSRSVFGLFNVPAKWYAWI 180
Query: 181 LLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKF 240
LLVLFQ L +NVSLLGHLCGILSGFAYTYG FN L+PG SFYS IE S LS C+R+P F
Sbjct: 181 LLVLFQFLASNVSLLGHLCGILSGFAYTYGLFNYLLPGPSFYSKIEGLSALSVCVRRPGF 240
Query: 241 ILCTGGNPSGYIPTYSGQNTSSSGLFSGNIWSNLSSWMPQRETSS-QPTQDSRFPGRGRT 299
I+CTGG G +PTYS + + S L +GN N+SSWMP R TS+ Q +D RFPGR RT
Sbjct: 241 IMCTGGTTYGQLPTYSNTSAAPSALINGNFLRNISSWMPSRHTSTAQEGEDPRFPGRART 300
Query: 300 LSS-SQSPVHVDSNLQARLLDNSSPENRSHMIVT-ETGDRLSDERQPALG 347
L S P +++ + R+ VT E D +E + +G
Sbjct: 301 LGSVGTEPTAREASAHLHARHTAVNTVRADATVTAEQVDTFDEELKKLVG 350
>gi|62733420|gb|AAX95537.1| Putative Rhomboid family protein [Oryza sativa Japonica Group]
Length = 393
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 223/361 (61%), Positives = 265/361 (73%), Gaps = 19/361 (5%)
Query: 8 EAGLSTRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRF 67
+AG+STR NQWW SIPF TS V+++CG IYL+CLL GYDSF EICFLPS V SRFQVYRF
Sbjct: 2 QAGISTRLNQWWGSIPFITSGVILICGAIYLVCLLTGYDSFAEICFLPSVVASRFQVYRF 61
Query: 68 YTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAH 127
YTS+VFHGSLLHVLFNMLALVPLG+ELERIMGSVR+ ++ LLAT+NAI HL+IA L A+
Sbjct: 62 YTSVVFHGSLLHVLFNMLALVPLGTELERIMGSVRLLFLMFLLATTNAIFHLIIAFLAAY 121
Query: 128 IPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQV 187
P Y L ++DEC+IGFSGVIFS+IVIETSLSG Q+RSVFGLFN+PA WY ILLVLFQ
Sbjct: 122 NPLYPLHFLVDECSIGFSGVIFSMIVIETSLSGVQTRSVFGLFNVPANWYAWILLVLFQF 181
Query: 188 LMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFILCTGGN 247
L +NVSLLGHLCGILSGFAYTYG FN L+PG SFYS+IE S+LS C+R+P FILCTGG
Sbjct: 182 LASNVSLLGHLCGILSGFAYTYGLFNYLLPGPSFYSSIEGLSVLSVCVRRPGFILCTGGT 241
Query: 248 PSGYIPTYSGQNTSSSGLFSGNIWSNLSSWMPQR----ETSSQPTQDSRFPGRGRTLSSS 303
G +PT+S +T+ S L + N N+SSW+P R + QD RFPGR RTLSS+
Sbjct: 242 TYGQLPTFSNTSTAPSALINANFLRNISSWIPSRQTTTTQGNTQEQDPRFPGRARTLSSA 301
Query: 304 ---QSPVHVDSNLQARLLDNSSPENRSHMIVTETGDRLSDERQPALGTAVAVDRVPAGQQ 360
+ +NL A LLD+++P D L+ + PA T V D A Q
Sbjct: 302 GTEPTAREASANLHASLLDSTTPS-----------DPLTSSQHPAANT-VRADATVAADQ 349
Query: 361 V 361
V
Sbjct: 350 V 350
>gi|212722872|ref|NP_001131556.1| uncharacterized protein LOC100192896 [Zea mays]
gi|194691838|gb|ACF80003.1| unknown [Zea mays]
gi|414872100|tpg|DAA50657.1| TPA: hypothetical protein ZEAMMB73_465757 [Zea mays]
Length = 321
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 214/303 (70%), Positives = 250/303 (82%), Gaps = 1/303 (0%)
Query: 1 MRPNIVSEAGLSTRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVIS 60
MRPNI++EAG+ TR NQWW SIPF TS V+++CG IYL+CLL GYDS+ EICFLPSAV S
Sbjct: 1 MRPNIITEAGIPTRLNQWWSSIPFVTSGVILICGVIYLLCLLIGYDSYVEICFLPSAVAS 60
Query: 61 RFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLL 120
FQVYRFYTS++FHGSLLHVLFNMLALVPLG+ELERIMGSVR+ ++ +LLAT+NAILHL
Sbjct: 61 HFQVYRFYTSVLFHGSLLHVLFNMLALVPLGTELERIMGSVRLLFLMLLLATTNAILHLT 120
Query: 121 IALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLI 180
IA LVA+ P Y + N+++EC+IGFSGVIFS+IVIETSLSG QSRSVFGLFN+PAKWY I
Sbjct: 121 IAFLVAYNPLYHVPNLVNECSIGFSGVIFSMIVIETSLSGVQSRSVFGLFNVPAKWYAWI 180
Query: 181 LLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKF 240
LLVLFQ L +NVSLLGHLCGILSGFAYTYG FN L+PG SFYS IE S LS C+R+P F
Sbjct: 181 LLVLFQFLASNVSLLGHLCGILSGFAYTYGLFNYLLPGPSFYSKIEGLSALSVCVRRPGF 240
Query: 241 ILCTGGNPSGYIPTYSGQNTSSSGLFSGNIWSNLSSWMPQRETSS-QPTQDSRFPGRGRT 299
I+CTGG G +PTYS + + S L +GN N+SSWMP R TS+ Q +D RFPGR RT
Sbjct: 241 IMCTGGTTYGQLPTYSNTSAAPSALINGNFLRNISSWMPSRHTSTAQEGEDPRFPGRART 300
Query: 300 LSS 302
L S
Sbjct: 301 LGS 303
>gi|294460477|gb|ADE75816.1| unknown [Picea sitchensis]
Length = 410
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/342 (61%), Positives = 252/342 (73%), Gaps = 6/342 (1%)
Query: 1 MRPNIVSEAGLSTRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVIS 60
MR NIVSEA STR QWW +PF TS +V VCG IYL+CLL GYDSFY ICF P+ +I
Sbjct: 1 MRSNIVSEASWSTRVGQWWAGVPFITSGLVAVCGIIYLVCLLVGYDSFYAICFWPAQLIL 60
Query: 61 RFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLL 120
R QVYR YTS+VFHGS+LHV+FNM+ALVP+GS LERIMGSVR ++T+LLAT NA+LHLL
Sbjct: 61 RLQVYRIYTSVVFHGSVLHVMFNMMALVPIGSGLERIMGSVRYLHVTLLLATCNAVLHLL 120
Query: 121 IALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLI 180
IA L AH P + MDEC IGFSG+IF++IV+ETSL+G QSRSVFGLFN+P KWY I
Sbjct: 121 IAYLAAHNPVHPYPFFMDECTIGFSGIIFAMIVMETSLNGNQSRSVFGLFNVPGKWYASI 180
Query: 181 LLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKF 240
LL+LFQ+LM NVSLLGHLCGILSGFAYTYG FN + G + Y+AIESS++L+ C+R+P F
Sbjct: 181 LLILFQLLMPNVSLLGHLCGILSGFAYTYGLFNYFLLGLASYTAIESSAMLACCVRRPGF 240
Query: 241 ILCTGGNPSGYIPTYSGQNTSSSGLFSGNIWSNLSSWMPQRET-SSQPTQDSRFPGRGRT 299
I+ + S +T+SSG GN+W + S MPQRET +Q QD RFPGRGRT
Sbjct: 241 IIGGASGAAATGSLPSFPSTASSGAGLGNVWRSARSLMPQRETLPNQSLQDPRFPGRGRT 300
Query: 300 LSSSQ----SPVHVDSNLQARLLDNSS-PENRSHMIVTETGD 336
L SSQ S V ++ LQ RLL+ SS PE S M+ T +
Sbjct: 301 LGSSQIQSTSRVGSETELQTRLLERSSQPEAPSQMMPISTRE 342
>gi|302776366|ref|XP_002971354.1| hypothetical protein SELMODRAFT_147697 [Selaginella moellendorffii]
gi|300161336|gb|EFJ27952.1| hypothetical protein SELMODRAFT_147697 [Selaginella moellendorffii]
Length = 413
Score = 352 bits (902), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 181/333 (54%), Positives = 242/333 (72%), Gaps = 16/333 (4%)
Query: 1 MRPNIVSEAGLSTRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVIS 60
M PN+VSEA LSTRA+QWW SIP T +I+C IY++ LL GYD+F ++CF +VI
Sbjct: 1 MPPNVVSEASLSTRASQWWASIPAITGGTLILCVAIYIVDLLIGYDNFQQVCFSTDSVIG 60
Query: 61 RFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLL 120
FQVYR T+++FH SLLHVLFNMLALVP+GS LERIMGSVR ++ +LLA SNA++H+L
Sbjct: 61 NFQVYRAITAVLFHASLLHVLFNMLALVPIGSSLERIMGSVRYLHVILLLAVSNAVIHIL 120
Query: 121 IALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLI 180
IA +VA+ P Y ++V+ EC IGFSG++F++IVIE SL Q+RS+FGLFN+PAKWYP +
Sbjct: 121 IAYIVAYNPIYVHKSVLMECQIGFSGILFAMIVIEGSLYTGQNRSIFGLFNVPAKWYPWV 180
Query: 181 LLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKF 240
LL++FQ++M VSLLGHL GILSGFAY+YG FN+LM + Y+ IESSSLL++C+R+P F
Sbjct: 181 LLIIFQMIMPRVSLLGHLSGILSGFAYSYGLFNVLMLSQATYTKIESSSLLASCMRRPGF 240
Query: 241 ILCTGGNPSGYIPTYSGQNTSSSGLFSGNIWSNL-SSWMPQRETSSQPTQDSRFPGRGRT 299
I+ GG+ + +PT+S +SS+ L G+ WS L SS PQR+ D RFPG GRT
Sbjct: 241 IVG-GGSANATLPTFS--TSSSNTLNFGDTWSRLRSSLTPQRDVPI----DERFPGTGRT 293
Query: 300 L-------SSSQSPVHVD-SNLQARLLDNSSPE 324
L + P + ++L+ARLL++ E
Sbjct: 294 LGGVSRLQQQTTPPATANATDLEARLLEDDDLE 326
>gi|302756069|ref|XP_002961458.1| hypothetical protein SELMODRAFT_140420 [Selaginella moellendorffii]
gi|300170117|gb|EFJ36718.1| hypothetical protein SELMODRAFT_140420 [Selaginella moellendorffii]
Length = 413
Score = 350 bits (897), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 179/333 (53%), Positives = 241/333 (72%), Gaps = 16/333 (4%)
Query: 1 MRPNIVSEAGLSTRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVIS 60
M PN+VSEA LSTRA+QWW SIP T +I+C IY++ LL GYD+F ++CF VI
Sbjct: 1 MPPNVVSEASLSTRASQWWASIPAITGGTLILCVAIYIVDLLIGYDTFQQVCFSTDTVIG 60
Query: 61 RFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLL 120
FQVYR T+++FH SLLHVLFNMLALVP+GS LER+MGSVR ++ +LLA SNA++H+L
Sbjct: 61 NFQVYRAITAVLFHASLLHVLFNMLALVPIGSSLERVMGSVRYLHVILLLAVSNAVIHIL 120
Query: 121 IALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLI 180
IA +VA+ P Y ++V+ EC IGFSG++F++IVIE SL Q+RS+FGLFN+PAKWYP +
Sbjct: 121 IAYIVAYNPIYVHKSVLMECQIGFSGILFAMIVIEGSLYTGQNRSIFGLFNVPAKWYPWV 180
Query: 181 LLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKF 240
LL++FQ++M VSLLGHL GILSGF+Y+YG FN+LM + Y+ IESSSLL++C+R+P F
Sbjct: 181 LLIIFQMIMPRVSLLGHLSGILSGFSYSYGLFNVLMLSQATYTKIESSSLLASCMRRPGF 240
Query: 241 ILCTGGNPSGYIPTYSGQNTSSSGLFSGNIWSNL-SSWMPQRETSSQPTQDSRFPGRGRT 299
I+ GG+ + +PT+S +SS+ L G+ WS L SS PQR+ D RFPG GRT
Sbjct: 241 IVG-GGSANATLPTFS--TSSSNTLNFGDTWSRLRSSLTPQRDVPI----DERFPGTGRT 293
Query: 300 L-------SSSQSPVHVD-SNLQARLLDNSSPE 324
L + P + ++L+ARLL++ E
Sbjct: 294 LGGVSRLQQQTTPPATANATDLEARLLEDDDLE 326
>gi|115454379|ref|NP_001050790.1| Os03g0651100 [Oryza sativa Japonica Group]
gi|62733419|gb|AAX95536.1| Putative Rhomboid family protein [Oryza sativa Japonica Group]
gi|113549261|dbj|BAF12704.1| Os03g0651100 [Oryza sativa Japonica Group]
Length = 222
Score = 323 bits (829), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 155/208 (74%), Positives = 180/208 (86%)
Query: 1 MRPNIVSEAGLSTRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVIS 60
MRPN+++EAG+STR NQWW SIPF TS V+++CG IYL+CLL GYDSF EICFLPS V S
Sbjct: 1 MRPNVITEAGISTRLNQWWGSIPFITSGVILICGAIYLVCLLTGYDSFAEICFLPSVVAS 60
Query: 61 RFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLL 120
RFQVYRFYTS+VFHGSLLHVLFNMLALVPLG+ELERIMGSVR+ ++ LLAT+NAI HL+
Sbjct: 61 RFQVYRFYTSVVFHGSLLHVLFNMLALVPLGTELERIMGSVRLLFLMFLLATTNAIFHLI 120
Query: 121 IALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLI 180
IA L A+ P Y L ++DEC+IGFSGVIFS+IVIETSLSG Q+RSVFGLFN+PA WY I
Sbjct: 121 IAFLAAYNPLYPLHFLVDECSIGFSGVIFSMIVIETSLSGVQTRSVFGLFNVPANWYAWI 180
Query: 181 LLVLFQVLMTNVSLLGHLCGILSGFAYT 208
LLVLFQ L +NVSLLGHLCGILSG+ +
Sbjct: 181 LLVLFQFLASNVSLLGHLCGILSGYLWA 208
>gi|147773437|emb|CAN73436.1| hypothetical protein VITISV_006399 [Vitis vinifera]
Length = 353
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 168/312 (53%), Positives = 201/312 (64%), Gaps = 56/312 (17%)
Query: 85 LALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGF 144
+ALVPLGSELERIMGSVR+FY+ +LLATSNAI H+LIA LVA+ PFY +M+ECAIGF
Sbjct: 1 MALVPLGSELERIMGSVRLFYMIVLLATSNAIFHVLIASLVAYNPFYSYHYLMNECAIGF 60
Query: 145 SGVIFSLIVIETSLSGAQSRSVFGLFNIPAK----------W------------------ 176
SG++FS+IVIETSLSGAQ+R +F I A W
Sbjct: 61 SGILFSMIVIETSLSGAQTRRIFAETVISANVVNSLVSADAWELRICNLSVESCAPARLD 120
Query: 177 ---YPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLST 233
Y ILLV+FQ+LMTNVSLLGHLCGILSGFAYTYG FN L+PGTSFYSAIESSSLL+
Sbjct: 121 VHMYAWILLVVFQLLMTNVSLLGHLCGILSGFAYTYGLFNFLIPGTSFYSAIESSSLLAN 180
Query: 234 C---IRQPKFILCTGGNPSGYIPTYSGQNTSSSGLFSGNIWSNLSSWMPQRETSSQPTQD 290
+ K+ SGL SGNIW NLSSWMPQR S+Q TQ+
Sbjct: 181 IRFYVVDVKYF--------------------XSGLISGNIWRNLSSWMPQRGMSTQATQE 220
Query: 291 -SRFPGRGRTLSSSQSPVH-VDSNLQARLLDNSSPENRSHMIVTETGDRLSDERQPALGT 348
SRFPGRGRTLSSS+S DS L+ARLLDNS+ ++ + T ++ DER+ ++ +
Sbjct: 221 SSRFPGRGRTLSSSRSQTTPSDSTLEARLLDNSNLDHSLDVAANTTQQQVLDERRSSVDS 280
Query: 349 AVAVDRVPAGQQ 360
A AV R A Q
Sbjct: 281 AAAVARGNAHBQ 292
>gi|168022284|ref|XP_001763670.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685163|gb|EDQ71560.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 214
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 129/206 (62%), Positives = 163/206 (79%)
Query: 1 MRPNIVSEAGLSTRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVIS 60
MR N+V+EA LSTRANQWW ++P T+ VV +C IY+ICLLFGYDSF ++C LP ++
Sbjct: 1 MRGNVVTEASLSTRANQWWAAVPCVTAGVVFLCTAIYVICLLFGYDSFIQVCLLPKYIVD 60
Query: 61 RFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLL 120
R QVYR YTSIVFH S+LH++FNMLAL P+GS LERI+GSVR ++ ++ATSNA++ ++
Sbjct: 61 RVQVYRPYTSIVFHASILHLVFNMLALAPIGSGLERILGSVRYLHVLFIMATSNALIEVV 120
Query: 121 IALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLI 180
IA L A+ P + +M EC IGFSGVIFS+IV+ETSL+ Q+RSVFG F++PAKWYP
Sbjct: 121 IAYLAAYNPVHPYPGLMYECGIGFSGVIFSMIVMETSLNPVQTRSVFGFFSVPAKWYPWA 180
Query: 181 LLVLFQVLMTNVSLLGHLCGILSGFA 206
LLVLFQ+LM SLLGHL GILSGFA
Sbjct: 181 LLVLFQLLMPRASLLGHLAGILSGFA 206
>gi|384252274|gb|EIE25750.1| rhomboid-domain-containing protein, partial [Coccomyxa
subellipsoidea C-169]
Length = 286
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 107/262 (40%), Positives = 159/262 (60%), Gaps = 5/262 (1%)
Query: 8 EAGLSTRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRF 67
+A +STR W+++IP T +V+++C +Y+ LL G+D +C P ++ RFQV+R
Sbjct: 5 QASISTRVKIWFDAIPLVTRSVLVLCVGVYIFGLLTGFDDHAAVCLNPHILVERFQVFRL 64
Query: 68 YTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAH 127
+TS FH LLH+ FNMLA VP+ LER +GS++ ++ ++L I ++ + L +
Sbjct: 65 FTSAFFHAGLLHIGFNMLAFVPVAMSLERQLGSLQTLHLLLMLILVGDIFYISASYLASF 124
Query: 128 IPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQV 187
+ ++ + CAIG SG IF LIV++ + SGAQ+RS+FG+F + AKWYP LLV +Q+
Sbjct: 125 V-LADARSYLASCAIGLSGAIFGLIVVDNACSGAQTRSIFGMFTVSAKWYPWALLVFWQL 183
Query: 188 LMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFILCTGGN 247
LM VS LGHL G+L+G AY +G+ LM TS Y A E L C R +I TG
Sbjct: 184 LMPGVSFLGHLGGVLAGQAYVWGWLRWLMLSTSAYQAAEGWRGLDWCRRWDCYIAHTGAG 243
Query: 248 ---PSGYIPT-YSGQNTSSSGL 265
P+ +PT Y+ + SGL
Sbjct: 244 AHPPAMQLPTSYNASVQADSGL 265
>gi|255080710|ref|XP_002503928.1| predicted protein [Micromonas sp. RCC299]
gi|226519195|gb|ACO65186.1| predicted protein [Micromonas sp. RCC299]
Length = 232
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 100/236 (42%), Positives = 147/236 (62%), Gaps = 4/236 (1%)
Query: 6 VSEAGLSTRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVY 65
+ E+ L TR ++ S+P T V + C +Y+ +L G+D F +IC PS V+ QVY
Sbjct: 1 MQESSLQTRGRDFYGSLPLGTRGVFVTCVALYVTGVLLGFDDFAQICMAPSWVLRDGQVY 60
Query: 66 RFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLV 125
R +TS++FHGS+LH+ FNM+A VP+ S LER++G+V+ YI +L +I H+ +A +
Sbjct: 61 RMFTSVLFHGSVLHLAFNMMAFVPMASSLERLLGTVQFTYILVLFTLLASIFHVGLAFIG 120
Query: 126 AHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLF 185
+ + M ECAIGFSGVIF +IV++T LS RS+FG F +P++WYPL LL+
Sbjct: 121 GTLGY----PSMHECAIGFSGVIFGVIVVDTHLSSVAQRSIFGFFTVPSQWYPLSLLIFL 176
Query: 186 QVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFI 241
QVLM +VS +GHL G+L+G Y G N L+ S + IE + + +R FI
Sbjct: 177 QVLMPSVSFVGHLSGLLAGLTYVRGHLNPLLLRPSTTAWIEQHAWAAPAVRHGAFI 232
>gi|159464026|ref|XP_001690243.1| rhomboid-like protease [Chlamydomonas reinhardtii]
gi|158284231|gb|EDP09981.1| rhomboid-like protease [Chlamydomonas reinhardtii]
Length = 394
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 92/239 (38%), Positives = 141/239 (58%), Gaps = 6/239 (2%)
Query: 11 LSTRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTS 70
L W+ +P T +V ++ IYL L+ GYD+ Y +C P + ++VYR TS
Sbjct: 9 LVNSVQNWFNGLPICTKSVFVLISGIYLFQLVTGYDNIYGVCLSPYETVVHYEVYRLLTS 68
Query: 71 IVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLV--AHI 128
++ HG LLHV FNMLA VP+ LER++G+V+ Y+ +L+ ++ + L+ +H+
Sbjct: 69 VLVHGGLLHVTFNMLAFVPMACSLERLVGTVQFTYLLLLMTVLAGLVFTATSFLLFFSHV 128
Query: 129 PFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVL 188
L M +CAIGFSGVIF LIV++ + S + RS+FGLF +PA +YP LL+ +Q+L
Sbjct: 129 ----LPAAMRQCAIGFSGVIFGLIVVDNAQSASSHRSIFGLFTVPAAYYPWALLLFWQLL 184
Query: 189 MTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFILCTGGN 247
M +VS +GHL G+L G A+ G+ L +E + LS+C+R P F++ G
Sbjct: 185 MPSVSFIGHLAGVLVGAAWVGGYLRPLALSRPATVWLEGWAGLSSCVRLPSFMMMPGAT 243
>gi|303271301|ref|XP_003055012.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462986|gb|EEH60264.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 231
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 91/230 (39%), Positives = 131/230 (56%), Gaps = 3/230 (1%)
Query: 12 STRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSI 71
RA W+ S+PF T V +C Y++C+L G+D F C P V++ +VYR T+
Sbjct: 5 GARAGDWYSSLPFGTRGVFTICVASYVLCVLVGFDDFARACVAPRHVLATGEVYRALTAP 64
Query: 72 VFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFY 131
FHGSLLH+ NM A V S LER +G+ + I +L A A H+ +A A + F
Sbjct: 65 FFHGSLLHLALNMTAFVGTASGLERSLGTTQFALIVLLFALVAAAYHVALATAAALVGF- 123
Query: 132 RLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTN 191
ECAIG SG+IF LIV++T LS + RSVFG F++P+ WYPL LL+ QV+
Sbjct: 124 --TGAPMECAIGLSGIIFGLIVVDTHLSAIERRSVFGFFDVPSGWYPLGLLLFIQVIAPA 181
Query: 192 VSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFI 241
VS LGH G+L+G Y G+ N ++P + + E+ ++ R+ F+
Sbjct: 182 VSFLGHAAGLLAGLTYVRGYLNPVLPSPAAIESFEAWPAMAAATRRRGFV 231
>gi|440800861|gb|ELR21891.1| peptidase, S54 (rhomboid) subfamily protein [Acanthamoeba
castellanii str. Neff]
Length = 342
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/225 (37%), Positives = 128/225 (56%), Gaps = 3/225 (1%)
Query: 7 SEAGLSTRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYR 66
S + TR W +P T ++ +C IY++ L+FG + F +C P VI +FQVYR
Sbjct: 5 SHPSVGTRLQDWLLHLPLATRSITALCCGIYIVGLIFGQNDF-SVCIFPPNVIEQFQVYR 63
Query: 67 FYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVA 126
T+ FH LHV+ NMLA L LER MGS Y+ +L +++++ ++L++
Sbjct: 64 LLTAGFFHVGFLHVVMNMLAFQALAPSLERAMGSFTFSYLVVLFQVVSSLMNTFLSLVLY 123
Query: 127 HIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQ 186
Y + ++C IG S V+FS +V+ + L + + S+FG ++PA+WYP +LLVLFQ
Sbjct: 124 KTGAY--PDAWNQCTIGLSSVLFSFLVLRSHLHQSHNMSLFGFVSVPAQWYPWVLLVLFQ 181
Query: 187 VLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLL 231
LM VS LGHL GIL + + +G L + + IESSS L
Sbjct: 182 FLMPEVSFLGHLTGILVAYLHVWGKLELFKLPSETINKIESSSYL 226
>gi|308806321|ref|XP_003080472.1| Rhomboid family proteins (ISS) [Ostreococcus tauri]
gi|116058932|emb|CAL54639.1| Rhomboid family proteins (ISS) [Ostreococcus tauri]
Length = 350
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 103/335 (30%), Positives = 154/335 (45%), Gaps = 27/335 (8%)
Query: 23 PFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLF 82
P T+ +V+V + G + F +C +P YR YTSI HG+L HV+F
Sbjct: 15 PLATTTIVVVMFVALASRVAIGANDFVGVCAVPKIAFHWTAYYRVYTSIFTHGNLPHVIF 74
Query: 83 NMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFY--RLQNVMDEC 140
N LA V G LER +G+ F+ L T + + A L + F Q ++ C
Sbjct: 75 NALAFVSTGGNLERSVGT---FHFAWLFVTFAHVAYFASAALAWGLYFGLGYTQGIL-TC 130
Query: 141 AIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCG 200
A+G SGVIF+LIV ET+ + RSVFGLF++ ++WYPL LLVL Q+++ VS LGH G
Sbjct: 131 AVGMSGVIFALIVCETNYTDVGRRSVFGLFDVASEWYPLALLVLIQLMIPGVSFLGHAGG 190
Query: 201 ILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFILCTGGNPSGYIPTYSGQNT 260
++ G+ Y G+ N L+ + +E+S++L+ F+ + G
Sbjct: 191 VVCGWMYVKGYLNFLLLRDAHAERLEASAILAPVRALSSFV--SANAERGARSNRDATAR 248
Query: 261 SSSGLFSGNIWSNLSSWMPQRETSSQPTQDSRFPGRGRTLSSSQSP-------VHVDSNL 313
+ G S W +P + + F G+GR L S V VD
Sbjct: 249 AFPGFTSPRTWE-----LPVHRSGTGTETHGAFTGKGRKLGGDGSTTGEMAALVKVDQRA 303
Query: 314 QARLLDNSSPENRS-HMIVTETGDR------LSDE 341
L+ PE+ + + GD+ LSDE
Sbjct: 304 LDTLVQMGFPEHAATRALQAADGDKARAIEILSDE 338
>gi|302853316|ref|XP_002958174.1| hypothetical protein VOLCADRAFT_99376 [Volvox carteri f.
nagariensis]
gi|300256535|gb|EFJ40799.1| hypothetical protein VOLCADRAFT_99376 [Volvox carteri f.
nagariensis]
Length = 373
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 85/233 (36%), Positives = 140/233 (60%), Gaps = 9/233 (3%)
Query: 16 NQWWESIPFFTSAVVIVCGTIYLICLLFGY--DSFYEICFLPSAVISRFQVYRFYTSIVF 73
W+ +P T A + I+++ LL G+ + +P AV+ +QVYRF+T+++
Sbjct: 36 QNWYNGLPLCTKATFSLIMGIFIVQLLTGWYGSQSTAVSLVPHAVLYDYQVYRFFTAVLV 95
Query: 74 HGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRL 133
HG LLHV FNMLA VP+G+ LER G+ ++ + +L +++ +++ L+A +
Sbjct: 96 HGGLLHVTFNMLAFVPIGASLERAAGTWQLLHFMLLSCFLEGVIYAVVSGLLAASGL--V 153
Query: 134 QNVMDECAIGFSGVIFSLIVIETSL----SGAQSRSVFGLFNIPAKWYPLILLVLFQVLM 189
+ A+GFSGVIF L+V +++L S + RS+FGLF++PA WYP +LL+L Q+++
Sbjct: 154 HGALFHGAVGFSGVIFGLLVWDSALLSSSSSSSHRSIFGLFHVPAPWYPWVLLLLCQLML 213
Query: 190 TNVSLLGHLCGILSGFAYTYGFFN-LLMPGTSFYSAIESSSLLSTCIRQPKFI 241
SLLGHL G+L G + +G+ L +P ++ +SS L S C+R P F+
Sbjct: 214 PEASLLGHLAGLLVGQLWVWGYLRPLALPRSAVLWLEQSSPLASRCVRLPSFV 266
>gi|219112025|ref|XP_002177764.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410649|gb|EEC50578.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 304
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/228 (34%), Positives = 127/228 (55%), Gaps = 2/228 (0%)
Query: 13 TRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIV 72
+R N+ + P T+ ++ +C ++++ + + P VI R ++YR TS +
Sbjct: 2 SRFNELLQRTPQTTTGIIALCVILHVVTKVLLDLNLRIFTLCPQLVIYRLEIYRIATSAL 61
Query: 73 FHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYR 132
FHG+++H+ NM+ + +GS LE+ G+ R+ I + IL++ IAL +A I +
Sbjct: 62 FHGNIMHLAMNMMTTLAIGSLLEKRFGTFRLLLIILWSILLTGILYIGIALFLAII--IQ 119
Query: 133 LQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNV 192
+M + ++GFSGVIF L V+E++L QSRSVFG F++P+ YP +LLV Q+ M +
Sbjct: 120 KNQLMRQHSVGFSGVIFHLSVLESNLGTHQSRSVFGFFDVPSYLYPWVLLVGLQIFMPGL 179
Query: 193 SLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKF 240
S GHL GIL G YG N ++ G +++ S L RQ F
Sbjct: 180 SFTGHLVGILVGTLQLYGGLNWILWGEERLKRVDNWSRLDFLTRQHNF 227
>gi|224028831|gb|ACN33491.1| unknown [Zea mays]
gi|414872104|tpg|DAA50661.1| TPA: hypothetical protein ZEAMMB73_465757 [Zea mays]
Length = 195
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/122 (51%), Positives = 80/122 (65%), Gaps = 4/122 (3%)
Query: 208 TYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFILCTGGNPSGYIPTYSGQNTSSSGLFS 267
TYG FN L+PG SFYS IE S LS C+R+P FI+CTGG G +PTYS + + S L +
Sbjct: 7 TYGLFNYLLPGPSFYSKIEGLSALSVCVRRPGFIMCTGGTTYGQLPTYSNTSAAPSALIN 66
Query: 268 GNIWSNLSSWMPQRETSS-QPTQDSRFPGRGRTLSS---SQSPVHVDSNLQARLLDNSSP 323
GN N+SSWMP R TS+ Q +D RFPGR RTL S + ++L ARLLDN++P
Sbjct: 67 GNFLRNISSWMPSRHTSTAQEGEDPRFPGRARTLGSVGTEPTAREASAHLHARLLDNTTP 126
Query: 324 EN 325
+
Sbjct: 127 SD 128
>gi|299473184|emb|CBN78760.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 317
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 115/210 (54%), Gaps = 10/210 (4%)
Query: 22 IPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVL 81
+P T A +C I C+ + +PS +I + YR T + HG L+H++
Sbjct: 13 VPLCTLAFATLC-IILQGCVFVFNTNIGNYVLIPSRIIYLGEYYRVITGALLHGGLMHIV 71
Query: 82 FNMLALVPLGSELERIMGSVRMFYITILLATSNAILHL----LIALLVAHIPFYRLQNVM 137
FNM++ + +GS LE G++ + + + ++H ++ + V H P Y +
Sbjct: 72 FNMMSFLSIGSSLEVAFGTLSLLFTILWSMILAGVVHCGAEWVMTVWVTHDPTY-----V 126
Query: 138 DECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGH 197
++ ++GFSGVIF+L ++E+ S +RSVFG+ +P + YP +LLVL V M ++S +GH
Sbjct: 127 NQPSVGFSGVIFTLALMESYRSTQPTRSVFGMMRVPTRMYPWVLLVLLSVFMRDISFVGH 186
Query: 198 LCGILSGFAYTYGFFNLLMPGTSFYSAIES 227
L GIL G + YG LMP +FY +ES
Sbjct: 187 LSGILVGVMHVYGLTKPLMPSPAFYIEMES 216
>gi|145348648|ref|XP_001418758.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578988|gb|ABO97051.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 351
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/309 (30%), Positives = 145/309 (46%), Gaps = 22/309 (7%)
Query: 20 ESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISR--FQVYRFYTSIVFHGSL 77
+ P T+AVVI + + L D F +C P +R +TS HGS
Sbjct: 14 DGAPLATTAVVIAVAISFALALAANGD-FARVCASPRLAFEHPLSSYHRVWTSTFSHGSF 72
Query: 78 LHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVM 137
H L N LA VP+ S LER +G+ ++ A + L A + YR
Sbjct: 73 PHALLNCLAFVPMASALERSIGTTHFAWLFATFAHAAYALSASAATALWMALGYRAS--Y 130
Query: 138 DECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGH 197
+ CAIG SGV+F+LIV ET+++ + RSVFGLF + +++YP+ LL+ Q+LM VS +GH
Sbjct: 131 ESCAIGMSGVVFALIVCETNVNDVERRSVFGLFTVSSEYYPIALLLFIQLLMPGVSFIGH 190
Query: 198 LCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFILCTGGNPSGYIPTYSG 257
GI +G+ Y G+ N L+ + +E L+ C P L + ++P+ +
Sbjct: 191 AGGIAAGWLYVRGYLNFLLLKETHVEYLEK---LAIC--APARALAS------FVPSNAD 239
Query: 258 QNTSSSGLFSGNIWSNLSSWMPQRETSSQPTQDS---RFPGRGRTLSSSQSPVHVDSNL- 313
+ + S + S+ S+ T+++ FPG+GR L S +NL
Sbjct: 240 RGARPNAEASSTAFPAFSTVRAIPTRMSEVTRNAFAGNFPGQGRKLGGDGSTTGEMANLV 299
Query: 314 --QARLLDN 320
R LD
Sbjct: 300 RVDPRALDT 308
>gi|224001444|ref|XP_002290394.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973816|gb|EED92146.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 331
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 130/229 (56%), Gaps = 4/229 (1%)
Query: 13 TRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIV 72
+RA++ SIP T +++ +C +YL L F + + P V+ + YR TS +
Sbjct: 2 SRASETLASIPLATLSIMALCCFVYLYQLAFD-PTLHNFTMCPRLVLYMNEYYRIITSSL 60
Query: 73 FHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYR 132
FHGSL+H+ NM++ + +G+ LE+ G+ M + +++++ + L+ ++ F
Sbjct: 61 FHGSLMHIGMNMMSTMAIGTSLEKRFGTFTMALTVLWGVLLTSVIYMTTSWLL-YVGF-G 118
Query: 133 LQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNV 192
+ +M + ++GFSGVIF L V+E +L+ +SRSVFG+ + +K YP LLV+ Q +M +
Sbjct: 119 YEKMMYQHSLGFSGVIFQLSVLEANLTPNRSRSVFGMIQVSSKMYPWCLLVVLQFIMPQI 178
Query: 193 SLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFI 241
S LGHL GIL G +G + + P ++ +E+ S L +P F+
Sbjct: 179 SFLGHLSGILLGTLQLHG-ADKIFPSDAYLQDLETWSALEAITTKPGFV 226
>gi|412991448|emb|CCO16293.1| predicted protein [Bathycoccus prasinos]
Length = 388
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 139/306 (45%), Gaps = 26/306 (8%)
Query: 19 WESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRF---QVYRFYTSIVFHG 75
++ +P T V + +L + S+ +C +P+ + Q YR +TS HG
Sbjct: 18 YQQLPMTTRCVFTINVFAFLFNAILRLFSYSTLCLIPALMRGGDFLGQFYRIFTSAFTHG 77
Query: 76 SLLHVLFNMLALVPLGS-ELERIMGSVR----MFYITILLATSNAILHLLIALLVAHIPF 130
S H+L NM A + +G+ LE +GSV +F TIL T++ +L + L+
Sbjct: 78 SFFHLLVNMCAFIQIGAYGLEMKLGSVNFALLVFLFTILCGTTHVLLASGMWYLLG---- 133
Query: 131 YRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMT 190
+ +ECA+GFSGVIFSL+V++T+ S + R VFGLF + A YP L+ + Q+L
Sbjct: 134 --MSGYQNECAVGFSGVIFSLVVLDTAFSNIRQRDVFGLFVVNAYMYPFALIAIVQLLAP 191
Query: 191 NVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFILCTGGNPSG 250
N S LGHL G++ G Y G+ N L+P IE+ L I + + + +
Sbjct: 192 NSSFLGHLSGVVVGSLYVKGYLNKLIPSERAVDRIENLILSGISIERLEGFVQNTSKSAR 251
Query: 251 YI-----PTYSGQNTSSSGLFSGNIWSNLSSW-------MPQRETSSQPTQDSRFPGRGR 298
+ SGQ S G + L W M E+ T G GR
Sbjct: 252 RVRREEGDVESGQQFISPGGTARTTTRKLKWWEVPVVARMESGESQKSSTSTPTIKGVGR 311
Query: 299 TLSSSQ 304
L +
Sbjct: 312 KLGKGK 317
>gi|428171532|gb|EKX40448.1| hypothetical protein GUITHDRAFT_75573, partial [Guillardia theta
CCMP2712]
Length = 186
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 106/189 (56%), Gaps = 6/189 (3%)
Query: 52 CFLPSAV-ISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILL 110
C +P + I Q YR TS HG LH+ FNM V G LE++MG+VR + ++
Sbjct: 1 CMMPHVIWIDHRQCYRIVTSAFVHGGFLHLGFNMYNFVFAGGRLEQMMGTVRFVNLIVVW 60
Query: 111 ATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSR-SVFGL 169
IL+ +IA + A + R N ECA+GFSGV+F+++ +++ + ++ S+FG
Sbjct: 61 VLVLGILYFVIAFVGALFQYARFWN---ECAVGFSGVLFAILTVDSFAAPLGTQFSMFG- 116
Query: 170 FNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSS 229
+ IPA+WYP +L+ QVLM NVS +GHL GIL F +++G + M +E +
Sbjct: 117 WQIPARWYPWAMLIFTQVLMPNVSFIGHLVGILGAFVFSHGLLDCFMLPPFVVLFLEKRA 176
Query: 230 LLSTCIRQP 238
+ +R P
Sbjct: 177 IKLALLRLP 185
>gi|154421477|ref|XP_001583752.1| Clan S-, family S54, Rhomboid-like serine peptidase [Trichomonas
vaginalis G3]
gi|121917995|gb|EAY22766.1| Clan S-, family S54, Rhomboid-like serine peptidase [Trichomonas
vaginalis G3]
Length = 289
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 136/278 (48%), Gaps = 22/278 (7%)
Query: 18 WWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFL-PSAVISRFQVYRFYTSIVFHGS 76
W + +PF T ++I +++ + F + +L P VI + + +R +TS H
Sbjct: 4 WLDELPFGTKYLLIFMILLHIAKITLMPPLFMQKLYLNPFLVIKQNEYWRIFTSQYVHAD 63
Query: 77 LLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNV 136
++H+ NM+ LG+ ER +G++ FY + + +L LIA +A R ++
Sbjct: 64 IIHLAMNMMTFYQLGNFFERSVGTIAFFYYIFIFGVLSNLLDCLIAWFMAWGG--RPEHF 121
Query: 137 MDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
+ A+GFSGV+FSL VI++++S RSV GLF +P +YP LL+ +++ + SLLG
Sbjct: 122 IGS-AVGFSGVLFSLTVIDSAVSPGSQRSVMGLFLVPKDFYPWALLLFMSIIIPSASLLG 180
Query: 197 HLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFILCTGGNPSGYIPTYS 256
H G++ G+ Y +G L+P +S IE + C N +GY Y+
Sbjct: 181 HATGMVMGYLYIFGLLKWLVPSKETFSKIERK------------LCCCALNHNGY---YA 225
Query: 257 GQNTSSSGLFSGNIWSNLSSWMPQRETSSQPTQDSRFP 294
+N ++ +++NL+ E D P
Sbjct: 226 AENNGANQYQPYALFNNLAG---NTENDDAAADDPENP 260
>gi|452824142|gb|EME31147.1| rhomboid domain-containing protein 1 [Galdieria sulphuraria]
Length = 337
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 145/315 (46%), Gaps = 36/315 (11%)
Query: 36 IYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELE 95
+YL+ + DSF+ C V ++VY + + + H S H+LFN++AL+ +G +E
Sbjct: 32 LYLLQTITKTDSFF-YCVSLEQVFFSYRVYLLFIAPLLHSSFWHLLFNVIALLGIGPVVE 90
Query: 96 RIMGSVRMFYITILLATSNA----ILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSL 151
GS + +LL + I LLI L ++ F+ + C +GFSG++F+L
Sbjct: 91 SRKGSTLYGLLCLLLLLVSESLFLIFELLIYLQSRYLFFFPISQ---SCVVGFSGLLFAL 147
Query: 152 IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGF 211
VI+ ++ +FG + + W P I L+L Q ++ VS LGHL GI +G+ Y G
Sbjct: 148 FVIDCIQVSVRTVQLFGRIPVRSNWIPWIFLLLIQAILPGVSFLGHLSGIFAGYIYILGG 207
Query: 212 FNLLMPGTSFYSAIES----SSLLSTCIRQPKFILCTGGNPSGYIPTYSGQNTSSSGLFS 267
F+ ++P + ++L S + I C+ PSG + + +
Sbjct: 208 FDWILPSCERLHQCDDRIWFANLNSFVLHND--ICCSAAQPSGRVSNFFSYQSLCP---- 261
Query: 268 GNIWSNLSSWMPQRETSSQPTQDSRFPGRGRTLSSSQSPVHVDSNLQARLLDNSSPENRS 327
SN+ +W + SS +D RFPG+G L S RL+ E +
Sbjct: 262 ----SNIRNWFSWKTDSS---EDIRFPGKGHRLGDDSS---------VRLISAQVTEQK- 304
Query: 328 HMIVTETGDRLSDER 342
+ E+G + DER
Sbjct: 305 -LSGKESGMKDVDER 318
>gi|330801370|ref|XP_003288701.1| hypothetical protein DICPUDRAFT_98105 [Dictyostelium purpureum]
gi|325081264|gb|EGC34786.1| hypothetical protein DICPUDRAFT_98105 [Dictyostelium purpureum]
Length = 382
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 127/235 (54%), Gaps = 10/235 (4%)
Query: 11 LSTRANQWWESIPFFTSAVVIVCGTIYLI-CLLFGYDSFYEICFLPSAVISR--FQVYRF 67
+S++ NQ+ +I T ++C +++++ C F +++C P ++S Y
Sbjct: 25 ISSKVNQYLSTIALTTRFFFLLCVSLFILEC--FNIIKAWQVCLSPYYLLSHPLSNAYTI 82
Query: 68 YTSIVFHGSLLHVLFNMLALVPLGSELER-IMGSVRMFYITILLATSNAILHLLIALLVA 126
TS FH ++LH+LFNMLA +PLGS LE+ G+++ FY+ +L + ++ +++++
Sbjct: 83 ITSNYFHINILHILFNMLAFIPLGSRLEKSKFGTLQFFYLIVLFSILIPLMTTVLSVIGL 142
Query: 127 HIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQ 186
+ R C++GFSG++FSL+ IE + S++G+ NIP+K YP +L +
Sbjct: 143 YTNITRFG--YYSCSVGFSGIVFSLLEIE--FFEDRLVSLYGITNIPSKLYPFAILFITY 198
Query: 187 VLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFI 241
++ + S LGHL GI G + G + L Y IE+S L+ I +I
Sbjct: 199 LIFPSSSFLGHLSGIFVGLLFVKGNLSFLFLSPEKYVQIETSEKLNRVISLQGYI 253
>gi|320168488|gb|EFW45387.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 327
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 152/330 (46%), Gaps = 38/330 (11%)
Query: 3 PNIVSEAG--LSTRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVIS 60
PN S A LSTR + W ++P T AV++VC ++++ + +I +A
Sbjct: 2 PNSASPANVSLSTRFHTWLSAVPLATRAVLLVCTAVFVLA---ATGAVPQIVQHGAAAPY 58
Query: 61 R--FQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILH 118
R Q +R +T ++ H L H++ NM+ VPL + ER GS+ + + + L+ ++H
Sbjct: 59 RDLTQPWRLFTHMLIHEQLWHIVLNMMTFVPLAAASERAHGSIALVLLLLELSLLGELVH 118
Query: 119 LLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIE-----TSLSGAQSRSVFGLFNIP 173
+ IA L+ +IG SGVIFSL+VI + + + RS+ +F +P
Sbjct: 119 VAIAALLL---AAGFPAAYYTTSIGMSGVIFSLLVISIHRTANASAANEQRSLCAIFTVP 175
Query: 174 AKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSL--- 230
+ YP LL++ Q + +VS LGHL GIL G+ + G F+L++ S S +E S L
Sbjct: 176 SSVYPWALLLVIQAFIPSVSFLGHLSGILVGYLFCLGLFDLIVTPQSIVSRLEGSVLSQR 235
Query: 231 ----------LSTCIRQPKFILCTGGNP--------SGYIPTYSGQNTSSSGLFSGNIWS 272
S P IL N G + + SS G +S
Sbjct: 236 GGFVASSSSIASVPRSSPSSILHAFRNGLSETWASFRGGLQHLRNRLFGSSPHAHGPAYS 295
Query: 273 NLSSWMPQR--ETSSQPTQDSRFPGRGRTL 300
NL S P+ E + + D RFPG G L
Sbjct: 296 NLPSNAPEPDVEAGASESGDKRFPGTGHRL 325
>gi|324513372|gb|ADY45497.1| Rhomboid domain-containing protein 1 [Ascaris suum]
Length = 331
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 90/161 (55%)
Query: 50 EICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITIL 109
E+C LPS +I + R S+V HG +H+ +NM++L+ G LER +GS R I ++
Sbjct: 55 EMCLLPSRIIGHREWIRMLASVVMHGDDMHLYYNMISLLWKGRRLERRLGSWRFLLILLV 114
Query: 110 LATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGL 169
A +++ + +++L + +M +CA+GFSGV+F+L V+ T+ + + G
Sbjct: 115 FAVASSCGIVALSVLATDVFHLHYLALMHQCAVGFSGVLFALKVLHTTYFPYEDSMLLGW 174
Query: 170 FNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYG 210
IP+++ L+L Q L S +GHL GIL G YT G
Sbjct: 175 MPIPSRYACWAELLLIQFLAPEASFIGHLSGILVGLLYTKG 215
>gi|393907597|gb|EJD74708.1| hypothetical protein LOAG_18018 [Loa loa]
Length = 314
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 112/218 (51%), Gaps = 5/218 (2%)
Query: 21 SIPFFTSAVVIVCGTIYLICL-LFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLH 79
+IP T AV+I I+L L L G +C LPS ++ R + R S V H +H
Sbjct: 27 NIPPITLAVIIFQMAIFLGYLPLLGQHRTEAMCLLPSRILYRSEWLRMLASTVMHVDDMH 86
Query: 80 VLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDE 139
+ FNM++L+ G LE +GS R + A + + + ++ L + + M++
Sbjct: 87 LYFNMISLLWKGRRLEPWLGSRRFLLLLATFALATSSTMVGLSYLADEVFTFNGGGYMNQ 146
Query: 140 CAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLC 199
CA+GFSGV+F+L V+ T+ ++FG IP+++ L+L Q+L N S +GHL
Sbjct: 147 CAVGFSGVLFALKVLHTTHFPYSDHNLFGWLPIPSQFACWAELILLQMLTPNASFIGHLS 206
Query: 200 GILSGFAYTYG----FFNLLMPGTSFYSAIESSSLLST 233
GI+ G AYT G ++L S I S SLL T
Sbjct: 207 GIIVGLAYTMGPLKTVVDILESIISLLFGIISGSLLQT 244
>gi|115620361|ref|XP_780455.2| PREDICTED: rhomboid domain-containing protein 1-like
[Strongylocentrotus purpuratus]
Length = 349
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 122/258 (47%), Gaps = 13/258 (5%)
Query: 20 ESIPFFTSAVVIVCGTIYL------ICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVF 73
+ IP T A ++ IYL I + S IC + V + R + + F
Sbjct: 30 DRIPPVTLATIVANVLIYLRVLNPYIKTVIRSPSIQNICVSSAHVWYKGDWPRLFLAAWF 89
Query: 74 HGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLA-TSNAILHLLIALLVAHIPFYR 132
H H+ FNM++ V G LER GS Y+ ++ +N LL+AL V
Sbjct: 90 HLDDFHLYFNMVSFVWKGISLERKFGSPYFAYLIVVFCFLTNG---LLVALNVGLAELLE 146
Query: 133 LQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNV 192
+ + CA GFSGV+F+L V+ T+ + QS+ + GLF++P++W + LVL Q+++
Sbjct: 147 DSSHIVSCAAGFSGVLFALKVLTTTYTPVQSQRIMGLFSVPSRWACWVELVLIQLIVPRA 206
Query: 193 SLLGHLCGILSGFAYTYGFFNLLMPGT-SFYSAIESSSLLSTCIRQPKFILCTGGNPSGY 251
S GHL GIL G AY G LLM + ++ + S + QP+ T G G
Sbjct: 207 SFTGHLAGILVGLAYVKGPLKLLMDALWNLFTTVLSGNPAQGARYQPR--ADTTGFREGG 264
Query: 252 IPTYSGQNTSSSGLFSGN 269
P + Q + G +G+
Sbjct: 265 PPPRTNQAYAGRGYATGS 282
>gi|290999042|ref|XP_002682089.1| rhomboid domain-containing protein [Naegleria gruberi]
gi|284095715|gb|EFC49345.1| rhomboid domain-containing protein [Naegleria gruberi]
Length = 368
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 109/207 (52%), Gaps = 14/207 (6%)
Query: 8 EAGLSTRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRF 67
E + + W+ P ++ V VC +Y++ +F +IC+ S I +V++
Sbjct: 68 EDPIHIKVKNWFLYFPLCSNIVFCVCIILYIVQGVFNEPKSSDICYRYSTTILTTKVWQL 127
Query: 68 YTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLAT-SNAILHLLIALLVA 126
+T FHGS+ H+LFNMLAL G+ +E +G++ F+I++ + +A+ + AL +
Sbjct: 128 FTFPFFHGSITHILFNMLALYQFGNRIESTLGTIYFFFISLFMIIFGSAVWVAIDALFIQ 187
Query: 127 HIPFYR-LQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLF-------NIPAKWYP 178
+ L ++D C +G+SGV+F +V Q R +F + K P
Sbjct: 188 GFGAGQTLSFLLDRCTVGYSGVLFGYLVFT-----VQYRPLFEQLYPGANADDFAPKLIP 242
Query: 179 LILLVLFQVLMTNVSLLGHLCGILSGF 205
++L++ +LM NVSL+GHL G++SG+
Sbjct: 243 WLMLIVTSLLMPNVSLMGHLTGMISGY 269
>gi|397569632|gb|EJK46866.1| hypothetical protein THAOC_34449 [Thalassiosira oceanica]
Length = 246
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 92/155 (59%), Gaps = 8/155 (5%)
Query: 90 LGSELERIMGSVRM---FYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSG 146
+GS LER +G++ M + ILL + AI + LL A + L+ +M + A GFSG
Sbjct: 3 IGSSLERQIGTIMMALTIFFGILL--TGAIYISISWLLFA---VFGLEKMMLQHAAGFSG 57
Query: 147 VIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFA 206
VIF L V+E++LS ++RSVFG+F + ++ YP LLV Q++M ++S LGHL GIL G
Sbjct: 58 VIFQLSVLESNLSPNRTRSVFGVFTVSSRMYPWALLVAIQLVMPHISFLGHLSGILIGSL 117
Query: 207 YTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFI 241
+G N+L P + E+S LS QP ++
Sbjct: 118 QYHGALNVLFPREEYLQECETSERLSVLRAQPSYV 152
>gi|300120076|emb|CBK19630.2| unnamed protein product [Blastocystis hominis]
Length = 152
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 74/115 (64%), Gaps = 4/115 (3%)
Query: 103 MFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQ 162
MFY+ L N +L++LI L++ I + + A GFSGVIFSL+++ T +
Sbjct: 1 MFYVIFLFTIINGLLYVLIYKLLSLIN----SSFLYVAAAGFSGVIFSLLLVMTYVIDVD 56
Query: 163 SRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMP 217
+ S+FGLF++P KWY +I L+L VL+ VS +GHLCGILSG+ + +G+ N +P
Sbjct: 57 TLSIFGLFSVPRKWYAIIYLILMSVLIPGVSFIGHLCGILSGYLFVFGYLNWAIP 111
>gi|66813132|ref|XP_640745.1| hypothetical protein DDB_G0281359 [Dictyostelium discoideum AX4]
gi|60468764|gb|EAL66765.1| hypothetical protein DDB_G0281359 [Dictyostelium discoideum AX4]
Length = 343
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 132/259 (50%), Gaps = 34/259 (13%)
Query: 20 ESIPFFTSAVVIVCGTIYLICL----LFGYDSFYEICFLPSAVISRF--QVYRFYTSIVF 73
+ IP T + I+C ++ + L +FG Y+ C ++ + F +YR S
Sbjct: 34 KKIPLATKVISIICSILFALSLVAPSMFGS---YKTCLSIESLTNSFLDNLYRIILSNFA 90
Query: 74 HGSLLHVLFNMLALVPLGSELERI-MGSVRMFYITILLATSNAILHLLIALLVAHIPFYR 132
H S+ H+++NM+ + L ++LER+ G+++ FY+ L ++ L+ I F
Sbjct: 91 HLSIYHIVYNMITFLDL-AKLERLTFGTLKYFYLLFLFG-------IITNLICLFIYFIG 142
Query: 133 LQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFN---IPAKWYPLILLVLFQVLM 189
NV C +GFSGV+F+LI IE++ SG R VF LFN IP+K YP +L+L V +
Sbjct: 143 RNNV---CHLGFSGVLFALIYIESNSSG---RDVF-LFNAVKIPSKLYPWAMLILAHVFV 195
Query: 190 TNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKF--ILCTGGN 247
S +GH GI+ G + G+ ++ + S IESS L++ + + I+ GG+
Sbjct: 196 PRSSFIGHFSGIVVGILFIKGYLDIFILSNQKLSEIESSQLMNIFTTKNSYFPIIKFGGS 255
Query: 248 PSGYIPTYSGQNTSSSGLF 266
+Y+ S GLF
Sbjct: 256 RR----SYNTDRKSLDGLF 270
>gi|321459244|gb|EFX70299.1| hypothetical protein DAPPUDRAFT_300486 [Daphnia pulex]
Length = 312
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 104/206 (50%), Gaps = 22/206 (10%)
Query: 20 ESIPFFTSAVVIVCGTIYLICLLFG-----YDSFYEICFLPSAVISRFQVYRFYTSIVFH 74
E+ P T +++V G + CL G +D+ +C AV+ + R S + H
Sbjct: 25 ETFPPVT--ILVVAGQV---CLFMGLIPVSWDAG-GVCLSAQAVLKWREYERLVLSALEH 78
Query: 75 GSLLHVLFNMLALVPLGSELERIMGSVRMFYI----TILLATSNAILHLLIALLVAHIPF 130
LH+ +NML+ + G LER GS Y+ T+L + + L +L++ L+
Sbjct: 79 ADDLHLYYNMLSFLSKGRSLERHFGSPYFAYLLSVFTVLTSVTYVGLEVLLSELLHDKQH 138
Query: 131 YRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMT 190
Y+ CAIGFSGVIF+L V+ TS + R FG+ + K+ + L+ Q+++
Sbjct: 139 YK------TCAIGFSGVIFALKVLTTSYWESGYRRYFGI-RVSGKYAVWVELIAIQLMVP 191
Query: 191 NVSLLGHLCGILSGFAYTYGFFNLLM 216
N S +GHL GIL G AYT G +M
Sbjct: 192 NTSFVGHLAGILVGVAYTQGPLKFIM 217
>gi|281204487|gb|EFA78682.1| methionyl-tRNA synthetase beta subunit [Polysphondylium pallidum
PN500]
Length = 400
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 104/222 (46%), Gaps = 25/222 (11%)
Query: 14 RANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVF 73
+ W SIP T ++C ++ + G +C P+ ++ + S
Sbjct: 51 KTKHWLASIPLSTRFYFLLCMLVFALTST-GRIYLNTLCSSPTNILDL--NFSKLASAFT 107
Query: 74 HGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLL---IALLVAHIPF 130
H +LH+LFNM + + L S L ++N ++ L+ IA L+++ P
Sbjct: 108 HSGILHILFNMSSFIQLKS-----------------LESTNVLVSLMSFAIAFLISYPPL 150
Query: 131 YRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMT 190
N + C++G SGVIF+L+ I+ S ++F IP K YP L+L Q LM
Sbjct: 151 -NYMNSLYTCSVGLSGVIFALLEIQC-YGSIHSTNLFAQIQIPLKLYPWAALLLAQFLMP 208
Query: 191 NVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLS 232
NVS +GHL GI+ GF Y G + L+P + IE S +S
Sbjct: 209 NVSFIGHLSGIIIGFLYAIGLLDALIPSNATLIKIELSDAMS 250
>gi|242015304|ref|XP_002428304.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212512889|gb|EEB15566.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 287
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 89/167 (53%), Gaps = 3/167 (1%)
Query: 50 EICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITIL 109
E+C +++I+ R + S V HG +H+ FNM + + G LE GS I
Sbjct: 56 EVCISGNSIINDKDWKRLFLSAVEHGDDMHLYFNMASFLIKGRSLEARYGSKNFAIILTF 115
Query: 110 LATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGL 169
L +++++++A +++++ + MD CAIGFSGVIF+L V+ T + G+
Sbjct: 116 LTIVTSLMYVILAFIMSNV--MEATSYMDSCAIGFSGVIFALKVLTTHEEPYIRAMLLGV 173
Query: 170 FNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLM 216
+IP K+ + L++ +L+ N S +GH GILSG Y F L +
Sbjct: 174 -DIPGKYAAWVELIIIHMLVPNSSFMGHFAGILSGVIYCKSFIGLFL 219
>gi|198416524|ref|XP_002119628.1| PREDICTED: similar to rhomboid domain containing 1 [Ciona
intestinalis]
Length = 333
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 86/167 (51%), Gaps = 2/167 (1%)
Query: 50 EICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITIL 109
++C + V R +R + HG H+ +NM++ + G LER +GS R Y+ +
Sbjct: 65 QVCAGVAQVWKRRDYWRIVEATFHHGGDWHLYYNMISFLWKGRSLERKIGSKRFLYMIAV 124
Query: 110 LATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGL 169
+ + L + A++ +R + +++CAIGFSGV+F++ V+ T L + + G
Sbjct: 125 FSVLVNYVMLWLNYGAANV--FRDGSYINQCAIGFSGVVFAVKVVTTQLMEPGTVLLLGF 182
Query: 170 FNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLM 216
+ ++ L+L QVL+ N S GHL GIL G AY G +M
Sbjct: 183 IPVNSRLSCWFELILIQVLVPNASFTGHLAGILVGLAYVKGPLKRIM 229
>gi|427785133|gb|JAA58018.1| Hypothetical protein [Rhipicephalus pulchellus]
Length = 450
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 97/196 (49%), Gaps = 12/196 (6%)
Query: 20 ESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLH 79
E+IP T +V+ +L + C +AVI + Q R + + HG LH
Sbjct: 26 EAIPPVTLFIVLAQACTFLQLFEVPWRDISGACISVNAVIFKKQWLRIFYGAIEHGDSLH 85
Query: 80 VLFNMLALVPLGSELERIMGSVRMFYITILLATSNAI----LHLLIALLVAHIPFYRLQN 135
+ +NM++ + G LE ++G + YI +L I L+ L+ V +Y
Sbjct: 86 LYYNMVSFIWKGMLLEPVLGGAQFAYIIVLFTALCGIVLLGLNYLLGTFVDSAFYY---- 141
Query: 136 VMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGL-FNIPAKWYPLILLVLFQVLMTNVSL 194
+CA+GFSGVIF+L V+ +SR G+ ++PA + LVL Q++ N SL
Sbjct: 142 ---QCAVGFSGVIFALKVLNNYYFPGRSRRFLGIDIDLPAGQVVWLELVLIQLVTPNASL 198
Query: 195 LGHLCGILSGFAYTYG 210
+GHL GIL G AY YG
Sbjct: 199 VGHLAGILVGLAYVYG 214
>gi|260796227|ref|XP_002593106.1| hypothetical protein BRAFLDRAFT_120182 [Branchiostoma floridae]
gi|229278330|gb|EEN49117.1| hypothetical protein BRAFLDRAFT_120182 [Branchiostoma floridae]
Length = 297
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 78/152 (51%), Gaps = 4/152 (2%)
Query: 66 RFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILH-LLIALL 124
R + FH H+ +NM + + G LER MGSVR Y+ LA H LL+ L
Sbjct: 64 RLIYAAFFHADEWHLYYNMASFMWKGITLERRMGSVRFLYV---LAVFTVCTHSLLLGLN 120
Query: 125 VAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVL 184
+ F+ + + +CA+GFSGVIF+L V+ T V G F +P + + LV+
Sbjct: 121 YSMDHFFHQSSYLADCAVGFSGVIFALKVLTTHYLPPGMTYVMGWFPVPRRIACWVELVV 180
Query: 185 FQVLMTNVSLLGHLCGILSGFAYTYGFFNLLM 216
Q+L+ S +GHL GIL G YT G +M
Sbjct: 181 IQILIPRASFMGHLSGILVGLLYTSGPLKAIM 212
>gi|428179463|gb|EKX48334.1| hypothetical protein GUITHDRAFT_136846 [Guillardia theta CCMP2712]
Length = 331
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 91/166 (54%), Gaps = 4/166 (2%)
Query: 64 VYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIAL 123
++R++TS + VL L +GS+ ER+ G++ Y+ +++ S IL AL
Sbjct: 45 LWRWFTSPFVEQGIFGVLIGCLVFGGIGSQFERMFGTLAFGYLFMVINVSANILFTFAAL 104
Query: 124 LVAHI-PFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILL 182
A I P L + ++ CA G + + +VI T S S +GL NIP K+YP LL
Sbjct: 105 FFAPILPEMHLLSPLN-CANGLWVSVLAFLVIHTQRSPHPFMSFWGLCNIPTKFYPWFLL 163
Query: 183 VLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESS 228
+LF +L S+L +LCGIL G+A+ +G+ +MP +S+ E+S
Sbjct: 164 ILFALL--GASVLENLCGILVGYAFQFGYLERVMPSEQKFSSWETS 207
>gi|291235069|ref|XP_002737468.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 414
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 96/191 (50%), Gaps = 4/191 (2%)
Query: 20 ESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLH 79
++IP T A ++ IYL L S +C V + + R + FH S +H
Sbjct: 33 DNIPPVTLASLVANTVIYLRILQV--PSIQTVCVSAVKVWHQHEWSRLLLASWFHTSDMH 90
Query: 80 VLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDE 139
+ FNM + + G LER +GS Y+ + + + L + + +L + + + + +
Sbjct: 91 LYFNMASFLWKGMSLERKLGSKYFAYMIAVFSVLTSSLLVCLDILASEV--FGDASYLYS 148
Query: 140 CAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLC 199
CA+GFS VIFS+ ++ T ++ + GL + ++ + LVL QVL+ NVS GHL
Sbjct: 149 CAVGFSAVIFSIKMVTTYSMAPGTQWIMGLIPVHSRIACWVELVLIQVLVPNVSFTGHLA 208
Query: 200 GILSGFAYTYG 210
GIL G AY G
Sbjct: 209 GILVGLAYVKG 219
>gi|449015371|dbj|BAM78773.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 425
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 103/212 (48%), Gaps = 17/212 (8%)
Query: 16 NQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHG 75
N S+PF +V C T+ +C +C P IS YR +T+ FH
Sbjct: 22 NAAIPSMPFGNLLLVGSC-TLLFLCQQALQIPLSAVCIDPELQISS-NTYRLFTAPFFHV 79
Query: 76 SLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIAL--LVAHIPFYR- 132
+L+H+ NM+ L+ +G LER +GS +I L+ + + ++A+ VA PF
Sbjct: 80 NLVHIFANMIVLLDIGPPLERRLGSFLFLFIVFLMICVSGVFRAILAMSVRVALTPFEMS 139
Query: 133 -----------LQNVMDECAIGFSGVIFSLIVIET-SLSGAQSRSVFGLFNIPAKWYPLI 180
++ CA+GFSGV+F+ +VI + G+ P+++YPL
Sbjct: 140 TRAPLLPLLSYIRRQTHACAVGFSGVLFAFLVIHVHQFVATDILWILGVVPCPSRFYPLA 199
Query: 181 LLVLFQVLMTNVSLLGHLCGILSGFAYTYGFF 212
LLVL Q+++ V L GHL G+L G+ Y G+
Sbjct: 200 LLVLLQLMVPAVDLCGHLAGMLVGYTYVRGWL 231
>gi|242006593|ref|XP_002424134.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212507451|gb|EEB11396.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 236
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 92/176 (52%), Gaps = 4/176 (2%)
Query: 50 EICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITIL 109
++C + ++ R + S + HG +H+ +NM + + G LE+ GS I I
Sbjct: 56 DVCLSGNGILKLKDWKRLFLSALEHGDDMHLYYNMASFLIKGRSLEKRYGSKCFAIILIF 115
Query: 110 LATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGL 169
L + +++L+A ++ + + + M CAIGFSGVIF+L V+ T + ++ G+
Sbjct: 116 LTILTSGIYVLLAQAMSEV--FENDSYMKSCAIGFSGVIFALKVLTTHEEPSLRATLVGV 173
Query: 170 FNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFF-NLLMPGTSFYSA 224
IP K+ I L+L +L+ N S +GHL GIL+G Y F N+L SF +
Sbjct: 174 -QIPGKYAAWIELILIHLLVPNSSFMGHLAGILAGVIYCNTIFGNVLDKSISFLTG 228
>gi|325180697|emb|CCA15102.1| serine protease family S54 putative [Albugo laibachii Nc14]
Length = 295
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 91/162 (56%), Gaps = 12/162 (7%)
Query: 49 YEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITI 108
Y +C P+ ++ R + R S FHG +H+ NM++ + G +LE MGS ++
Sbjct: 63 YMLC--PNLIVRRHEWERLIGSAFFHGDDIHLYHNMVSFLWKGYQLESKMGS---YHFAC 117
Query: 109 LLATSNAILHLLIALLVAHIPFYRLQN---VMDECAIGFSGVIFSLIVIETSLSGAQSRS 165
LL + H LI L A ++LQ+ +C++GFS V+F L V+ S S S +
Sbjct: 118 LLIYLLLVSHGLIVL--ASYLIFKLQHNPHAWTQCSLGFSAVLFGLKVVLNSKSPNTS-N 174
Query: 166 VFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAY 207
++G F +P K+ + LVL VL+ + S LGHLCGI++G+++
Sbjct: 175 IYG-FQVPTKYAAWLELVLIHVLVPDASFLGHLCGIVAGYSW 215
>gi|327267037|ref|XP_003218309.1| PREDICTED: rhomboid domain-containing protein 1-like [Anolis
carolinensis]
Length = 317
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 87/173 (50%), Gaps = 7/173 (4%)
Query: 50 EICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITIL 109
E+C S R +R Y S H H+ FNM++L+ G +LER +GS+ YI L
Sbjct: 54 EVCISVSEGFYRRDWHRLYLSAFHHADDWHLYFNMVSLLWKGIKLERRLGSMWFGYIITL 113
Query: 110 LATSNAILHLLIALLVAHIPFYRLQN--VMDECAIGFSGVIFSLIVIETSLSGAQSRSVF 167
+ I+++++ +A + L+N + CA+GFSGV+F+L V+ S S+
Sbjct: 114 FSVLVGIVYMILEFTLAEL----LENPSFIQSCAVGFSGVLFALKVLNNYYHPGGSSSLM 169
Query: 168 GLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTS 220
G++ + K+ + L+ +L S GHL GIL G YT G +M +
Sbjct: 170 GIY-VSNKYACWVELIAIHLLSPGSSFAGHLAGILVGLMYTMGPLKTIMKACA 221
>gi|299471888|emb|CBN77058.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 418
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 92/173 (53%), Gaps = 16/173 (9%)
Query: 44 GYDSFYEICFLPSAVISRFQ------VYRFYTSIVFHGSLLHVLFNMLALVPLGSELERI 97
G+D +C LP++++ ++ + R S HG +H+ +NM + + G LE
Sbjct: 92 GFDHIRNVCLLPASILDTYERTGEVEIRRLLMSPFVHGDDMHLYYNMASFLLKGVSLELT 151
Query: 98 MGS---VRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVI 154
MG+ + ++L + + +L + L+V +P + M CA+GFSGV+F+L +
Sbjct: 152 MGTQAFAGLLSFSLLASQTLMMLSAWVLLVVFDVP-----SPMHACAVGFSGVLFALKYV 206
Query: 155 ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAY 207
+ S + SV G F++ ++ + LVL V++ N S LGHLCGIL+G Y
Sbjct: 207 LSRRSPGVT-SVMG-FSVHTRYATWLELVLISVMVPNASFLGHLCGILAGVLY 257
>gi|196000606|ref|XP_002110171.1| hypothetical protein TRIADDRAFT_53891 [Trichoplax adhaerens]
gi|190588295|gb|EDV28337.1| hypothetical protein TRIADDRAFT_53891 [Trichoplax adhaerens]
Length = 348
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 91/190 (47%), Gaps = 5/190 (2%)
Query: 20 ESIPFFTSAVVIVCGTIYLICLLFGYD--SFYEICFLPSAVISRFQVYRFYTSIVFHGSL 77
+ IP T A I +I + LL Y E+C +V + R FH S
Sbjct: 25 DRIPPITLAT-IGLNSILFMNLLPDYRLPHLSEVCISVKSVWYMNEWQRLILGAFFHASD 83
Query: 78 LHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVM 137
+H+ +NM++ + G LE+ GS+ + I + + I+ + H +
Sbjct: 84 MHLYYNMVSFLWKGIHLEKKYGSLHFLSMIISFTALTNVTLVAISYAIGH--HTDKLHYF 141
Query: 138 DECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGH 197
+CA+GFSGVIF+L V+ T +S + + L I +++ LVL QVL+ N S LGH
Sbjct: 142 TDCAVGFSGVIFALKVVATYVSPPSTNYIMNLIPISSRYACWAELVLIQVLVPNSSFLGH 201
Query: 198 LCGILSGFAY 207
L GIL G AY
Sbjct: 202 LAGILVGLAY 211
>gi|62858293|ref|NP_001016449.1| rhomboid domain containing 1 [Xenopus (Silurana) tropicalis]
gi|89272850|emb|CAJ82135.1| novel protein containing rhomboid domain [Xenopus (Silurana)
tropicalis]
Length = 308
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 88/167 (52%), Gaps = 9/167 (5%)
Query: 66 RFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLV 125
RF S H H+ FNM++L+ G++LER +GS I I+ + ++++++ +
Sbjct: 67 RFLLSPFHHADDWHLYFNMVSLLWKGAKLERKLGSGLFATIIIVFSQLIGVVYVILEYGL 126
Query: 126 AHI---PFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILL 182
A P Y++Q CA+GFSGV+F+L V+ S +VFG+ IP K+ L
Sbjct: 127 AEFTGDPSYKMQ-----CAVGFSGVLFALKVLNNYYHPGGSSNVFGIL-IPNKYACWAEL 180
Query: 183 VLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSS 229
V +L S +GHL GIL G YT G ++ T+ +S SS+
Sbjct: 181 VAIHLLSPGTSFVGHLSGILVGLLYTQGPLKKILISTASFSNGPSST 227
>gi|443690109|gb|ELT92325.1| hypothetical protein CAPTEDRAFT_180450 [Capitella teleta]
Length = 356
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 4/198 (2%)
Query: 20 ESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLH 79
+ +P T + I+L + + +E+C V R R + + +H H
Sbjct: 24 DRVPPVTLGAIAAQVAIFLRLVKLPFGDIHEVCVSSLNVWYRGDWKRLFLASFYHLDEWH 83
Query: 80 VLFNMLALVPLGSELERIMGSVRMFYITILLAT-SNAILHLLIALLVAHIPFYRLQNVMD 138
+ FNM++++ G LER +GS Y+ ++ + +NAIL + L V + +
Sbjct: 84 LYFNMVSMLWKGVNLERRLGSAYFAYMVLVFSVLTNAIL---VGLGVIAEEILHDHSYIS 140
Query: 139 ECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHL 198
CA GFSGV+F+L V+ LS ++ V + + ++ L+L +L+ N S +GHL
Sbjct: 141 TCAAGFSGVLFALKVVAAHLSPPTTQYVMNIIPVNSRLACWAELLLIHILVPNSSFVGHL 200
Query: 199 CGILSGFAYTYGFFNLLM 216
GIL G Y G +M
Sbjct: 201 AGILVGLLYIKGPLKYIM 218
>gi|328870427|gb|EGG18801.1| methionyl-tRNA synthetase beta subunit [Dictyostelium fasciculatum]
Length = 277
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 111/228 (48%), Gaps = 36/228 (15%)
Query: 18 WWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAV----ISRFQVYRFYTSIVF 73
W ++IPF T ++ C T++L+ DS + F P+ + + ++ +R TS +F
Sbjct: 24 WIKNIPFITRIILYTCVTLFLL------DS--VLSFFPTVLCYLSFNIYESWRLITSTLF 75
Query: 74 HGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRL 133
H +LLH+LFNM+A +P + LE GSV Y+ ++ +++++ ++I+ + I
Sbjct: 76 HINLLHLLFNMMAFIPFSTLLENSCGSVLYGYLMLVFMITSSLMAVIISNTIYWID---P 132
Query: 134 QNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVS 193
+ C IG SGV+F L+ + RS +L S
Sbjct: 133 TAISYSCTIGLSGVVFLLVTVNCHWV-TTPRSF--------------------ILFPQSS 171
Query: 194 LLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFI 241
+GHL GI++ + Y Y + +++MP +I+SS+ L + + FI
Sbjct: 172 FIGHLGGIVAAYIYLYRYLDIIMPSDHLIISIQSSNHLQSIVNLNYFI 219
>gi|395528133|ref|XP_003766186.1| PREDICTED: rhomboid domain-containing protein 1 [Sarcophilus
harrisii]
Length = 344
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 90/192 (46%), Gaps = 3/192 (1%)
Query: 29 VVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALV 88
V + C + + L Y +C + + R S H H+ FNM++++
Sbjct: 30 VTLACIALNIWLFLNPLKPIYWLCLSVESCYEKKDWQRLLLSPFHHADDWHLYFNMVSML 89
Query: 89 PLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVI 148
G LER +GS YI + + +++L + VA + R V CAIGFSGV+
Sbjct: 90 WKGLTLERRLGSFWFAYIIAVFSLLTGVVYLALEYTVAELLDQREFKVY--CAIGFSGVL 147
Query: 149 FSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYT 208
F+L V+ + + ++ G++ IP K+ + LV+ +L S GHL GI+ G YT
Sbjct: 148 FALKVLSNNYNPGGHTNIMGMY-IPNKYACWVELVMIHLLSPRTSFAGHLAGIIVGLMYT 206
Query: 209 YGFFNLLMPGTS 220
G ++M +
Sbjct: 207 LGPLKMIMEACA 218
>gi|50752018|ref|XP_422616.1| PREDICTED: rhomboid domain-containing protein 1 [Gallus gallus]
Length = 317
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 96/204 (47%), Gaps = 13/204 (6%)
Query: 20 ESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLH 79
++IP T AV+I+ +L + +E C R R S V H H
Sbjct: 25 QNIPSVTLAVLILNVFFFLNPM----RPLHEACISVKEAFYRQNWQRLLLSPVHHVDDWH 80
Query: 80 VLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHI---PFYRLQNV 136
+ +NM++++ G LER +GS+ YI + + I+++L+ ++ I P Y +
Sbjct: 81 LYYNMVSMLWKGITLERKLGSMWFAYIIAVFSVLTGIVYVLLEFMLVKILNDPSYEMS-- 138
Query: 137 MDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
CA+GFSGV+F+L V+ + + SV GL I +K+ + LV + S G
Sbjct: 139 ---CAVGFSGVLFALKVLNNHYNPGRVSSVLGL-QISSKYACWVELVAIHFIAPRTSFAG 194
Query: 197 HLCGILSGFAYTYGFFNLLMPGTS 220
HL GIL G YT G +M +
Sbjct: 195 HLAGILVGLMYTMGPLKKIMKACA 218
>gi|326925844|ref|XP_003209118.1| PREDICTED: rhomboid domain-containing protein 1-like [Meleagris
gallopavo]
Length = 317
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 97/204 (47%), Gaps = 13/204 (6%)
Query: 20 ESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLH 79
++IP T AV+++ +L + +E C R R S V H H
Sbjct: 25 QNIPSVTLAVLVLNVFFFLNPV----RPLHEACISVREAFYRQNWQRLLLSPVHHVDDWH 80
Query: 80 VLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHI---PFYRLQNV 136
+ +NM++++ G LER +GSV YI + + I+++L+ L++ I P Y +
Sbjct: 81 LYYNMISMLWKGIMLERRVGSVWFAYIIAVFSVLTGIVYVLLELMLVKILNDPSYEM--- 137
Query: 137 MDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
CA+GFSGV+F+L V+ + + SV GL I +K+ + LV + S G
Sbjct: 138 --SCAVGFSGVLFALKVLNNHYNPGRVSSVLGL-QISSKYACWVELVAIHFISPGTSFAG 194
Query: 197 HLCGILSGFAYTYGFFNLLMPGTS 220
HL GIL G YT G +M +
Sbjct: 195 HLAGILVGLMYTMGPLKKIMKACA 218
>gi|340370436|ref|XP_003383752.1| PREDICTED: rhomboid domain-containing protein 1-like [Amphimedon
queenslandica]
Length = 335
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 85/174 (48%), Gaps = 4/174 (2%)
Query: 43 FGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVR 102
F + S E C V Q R + + H H+ +NM++ + LE+ GS+
Sbjct: 68 FHWPSVSESCISAKNVWYYGQWERLFLAPFIHADSWHLYYNMISFMWKARTLEKRYGSLY 127
Query: 103 MFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQ 162
Y+ + + ++L++ + H+ Y + + CA+GFSGVIF++ V+ T L
Sbjct: 128 FAYMIAMFTLLTSGVYLILNV---HLAEYFDWSYYNRCAVGFSGVIFAVKVLTTHLQPNH 184
Query: 163 SRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLM 216
VFG+ IP+K L+L VL N S +GHL GIL G A+ G ++M
Sbjct: 185 MSYVFGI-GIPSKLAVWAELLLISVLNPNASFIGHLAGILVGLAFVSGPLKMIM 237
>gi|168027437|ref|XP_001766236.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682450|gb|EDQ68868.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 330
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 91/163 (55%), Gaps = 13/163 (7%)
Query: 50 EICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVR-MFYITI 108
E+C P V+ + R + S ++H H+++NM++L G +LE MGS + +
Sbjct: 49 EVCLNPYFVVKNRDLKRLWLSALYHVDETHLVYNMISLTWKGIQLENSMGSQNYAAMVAV 108
Query: 109 LLATSNAILHLLIALL--VAHIP--FYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSR 164
LL S++++ + L +A P FY EC++GFSGV+F+L V+ S +
Sbjct: 109 LLGLSSSLVVASSSFLAFIADSPTSFY------SECSVGFSGVLFALKVVLNYNSPTHT- 161
Query: 165 SVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAY 207
+V+G+ +P+++ + L++ Q+ + S LGHLCGIL+G Y
Sbjct: 162 NVYGIL-VPSRYAAWVELLVIQMFVPGTSFLGHLCGILAGLIY 203
>gi|440796367|gb|ELR17476.1| peptidase, S54 (rhomboid) subfamily protein [Acanthamoeba
castellanii str. Neff]
Length = 293
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 90/175 (51%), Gaps = 3/175 (1%)
Query: 47 SFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYI 106
S Y++C V R + R + FH +H+ +NM++L+ G +LE MGS R +
Sbjct: 48 SIYDVCIGAGMVWHRLDLRRLLLASFFHLDDMHLYYNMVSLLWKGRDLEPRMGSKRFATL 107
Query: 107 TILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSV 166
+L A + +L ++ ++L+ F + + CA+GFS V+F+L V+ T S +
Sbjct: 108 VVLFALVSNMLMVVGSVLLDR--FADMPGPYNSCAVGFSAVLFALKVVTTHYSTSPYSHF 165
Query: 167 FGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSF 221
G+ +P ++ LVL +L+ S GHLCGIL+G Y G F ++ F
Sbjct: 166 MGML-VPTQYLYWFELVLIHLLVPGSSFFGHLCGILTGILYVKGVFRPILELVDF 219
>gi|391331176|ref|XP_003740026.1| PREDICTED: rhomboid domain-containing protein 1-like [Metaseiulus
occidentalis]
Length = 471
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 110/240 (45%), Gaps = 24/240 (10%)
Query: 31 IVCGTIYL-ICLLFG-----YDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
+ GTI L +CL G + S E C +I R + R ++S + H H+ +NM
Sbjct: 30 VTLGTIGLQVCLFLGLIKVPWRSIEECCISAYTLIERREFMRIFSSALEHSDSYHLYYNM 89
Query: 85 LALVPLGSELERIMGSVRMFYI----TILLATSNAILHLLIALLVAHIPFYRLQNVMDEC 140
+ V G LE +MG+ Y+ TIL+A + ++ +A+L + F M C
Sbjct: 90 ASFVWKGIILESVMGAPFFAYLLVVFTILVALVSVSINYALAILFSSFDF------MSSC 143
Query: 141 AIGFSGVIFSLIVIETSLSGAQSRSVFGLFN--IPAKWYPLILLVLFQVLMTNVSLLGHL 198
AIGFSGVIF+L V+ + V G +N +P Y + L L + + S +GHL
Sbjct: 144 AIGFSGVIFALKVVVNKVY-PDVHPVIGGYNLRVPGGMYVWLELALISLFVPRASFVGHL 202
Query: 199 CGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIR--QPKFILCTGGNPSGYIPTYS 256
GIL G AY+ GF L P + A+ + R QP+ GY PTY
Sbjct: 203 AGILVGTAYSVGF---LHPIFDIFGAVAGYNPHRQWTRGAQPRSYGYRRPQQPGYNPTYE 259
>gi|168008302|ref|XP_001756846.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692084|gb|EDQ78443.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 354
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 104/192 (54%), Gaps = 15/192 (7%)
Query: 23 PFFTSAVVIVCGTIYLI--CLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHV 80
P T+A++ V I+L L + E+C P VI + + R + S +H H+
Sbjct: 32 PPVTAALIAVQTLIHLRPGKLDDALPTLSEVCLNPYFVIKDWDLKRLFLSAFYHVDETHL 91
Query: 81 LFNMLALVPLGSELERIMGSVR---MFYITILLATSNAILHLLIALLVAHIP--FYRLQN 135
++NM++L+ G +LE MGS + + + + L++S + + +A P FY
Sbjct: 92 VYNMISLMWKGVQLEGSMGSQKFAGLLAVLLGLSSSLVVASSSLLAFLADSPTSFY---- 147
Query: 136 VMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLL 195
ECA+GFSGV+F+L V+ S + + +V+G+ +P+++ + L++ Q+ + S L
Sbjct: 148 --SECAVGFSGVLFALKVVLNYNSPSHT-NVYGIL-VPSRYAAWVELLVIQMFVPGTSFL 203
Query: 196 GHLCGILSGFAY 207
GHLCGIL+G Y
Sbjct: 204 GHLCGILAGVIY 215
>gi|449670102|ref|XP_002160201.2| PREDICTED: rhomboid-related protein 4-like [Hydra magnipapillata]
Length = 369
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 103/198 (52%), Gaps = 19/198 (9%)
Query: 20 ESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVY------RFYTSIVF 73
+ IP T A +++ ++L LF + S E A S F V+ R S +
Sbjct: 26 DQIPPITLATLVLNVAVFL--QLFPFMSTVE-----KACTSNFNVFHKGEWPRLIYSSFY 78
Query: 74 HGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRL 133
H +H+ FNM++ + G LER M R Y+ +LLA + + +++ LL + + F
Sbjct: 79 HLDDMHLYFNMVSFIWKGRNLERRMK--RSQYL-VLLALFSVLTQVVMLLLNSILSFIFT 135
Query: 134 QNV-MDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNV 192
+V + CA GFS VIF+L V+ T+ + +V G+ +P+++ LVL Q+++ NV
Sbjct: 136 NDVYLHSCAAGFSAVIFALKVL-TTHNSIDYETVMGIV-VPSRYACWAELVLIQIMVPNV 193
Query: 193 SLLGHLCGILSGFAYTYG 210
S GHL GIL G Y +G
Sbjct: 194 SFTGHLAGILVGLMYIFG 211
>gi|148237462|ref|NP_001087563.1| rhomboid domain containing 1 [Xenopus laevis]
gi|51258484|gb|AAH80107.1| MGC84665 protein [Xenopus laevis]
Length = 306
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 80/148 (54%), Gaps = 9/148 (6%)
Query: 66 RFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLV 125
RF S H H+ FNM++L+ G++LER +G+ I ++ + ++++++ ++
Sbjct: 67 RFLLSPFHHADDWHLYFNMVSLLWKGAKLERRLGTGLFASIILVFSQLIGVVYVILEYVL 126
Query: 126 AHI---PFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILL 182
A P +++Q CA+GFSGV+F+L V+ S +VFG+ IP K+ L
Sbjct: 127 AEFTGDPSFKMQ-----CAVGFSGVLFALKVLNNHYHPGGSSNVFGIL-IPNKYACWAEL 180
Query: 183 VLFQVLMTNVSLLGHLCGILSGFAYTYG 210
V +L S +GHL GIL G YT G
Sbjct: 181 VAIHLLSPGTSFVGHLSGILVGLLYTQG 208
>gi|219126331|ref|XP_002183413.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405169|gb|EEC45113.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 687
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 86/179 (48%), Gaps = 25/179 (13%)
Query: 56 SAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNA 115
S ++ +++R + H H+ FNM AL LGSELE GS + +T + T++
Sbjct: 266 SKMMHDGEIWRGLSGATAHFETWHLFFNMQALYSLGSELESNDGSTKYSSVTFFMYTASL 325
Query: 116 ILHLLIALLVAHIPFYRLQNVM------DECAIGFSGVIFSLIVIETSLSGAQSRSVFGL 169
+L I L+ R ++ M D +GFSGV+F+ +V+ SL +Q+ V L
Sbjct: 326 VLWTTIFWLLLETLKRRFESAMSPVASGDSPTVGFSGVLFAWMVV-ASLEQSQTCPVHFL 384
Query: 170 --------------FNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNL 214
FN PL+ L + QVL+ VSL GHL GILSG A +G L
Sbjct: 385 PSLCFVTHEFVGFRFNFA----PLVQLGIAQVLLPRVSLTGHLAGILSGLALHWGLLPL 439
>gi|115436016|ref|NP_001042766.1| Os01g0283500 [Oryza sativa Japonica Group]
gi|13486724|dbj|BAB39959.1| OSJNBa0004B13.13 [Oryza sativa Japonica Group]
gi|13486740|dbj|BAB39974.1| unknown protein [Oryza sativa Japonica Group]
gi|15408827|dbj|BAB64219.1| unknown protein [Oryza sativa Japonica Group]
gi|113532297|dbj|BAF04680.1| Os01g0283500 [Oryza sativa Japonica Group]
gi|222618217|gb|EEE54349.1| hypothetical protein OsJ_01336 [Oryza sativa Japonica Group]
Length = 350
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 78/234 (33%), Positives = 106/234 (45%), Gaps = 23/234 (9%)
Query: 47 SFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMF-Y 105
S + F P +I + RF+ S +H S H FNM +L+ G +LE MGSV
Sbjct: 74 SLNRVAFNPHLIIHYCDLTRFFLSAFYHLSETHFFFNMSSLLWKGIQLETSMGSVEFASM 133
Query: 106 ITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRS 165
+ LL S I LL L+ F + D+ A+GFSGV+F + V+ L+
Sbjct: 134 VAALLGMSQGITLLLSKGLLL---FGNDEAYYDQYAVGFSGVLFGMKVV---LNAWSDDY 187
Query: 166 VF--GLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYS 223
VF G+ IPAK+ L+L Q + SL+GHL GIL+G AY L SF
Sbjct: 188 VFLHGVV-IPAKYAAWAELLLIQAFIPGTSLIGHLGGILAGLAY-------LWLKRSFSG 239
Query: 224 AIESSSLLS---TCIRQP-KFI--LCTGGNPSGYIPTYSGQNTSSSGLFSGNIW 271
S L+S +R P F+ L G P GY P+ S+ IW
Sbjct: 240 PDPLSLLISGIGKAVRWPVGFVQKLFRSGRPQGYTPSRGRVGRGSARENGRGIW 293
>gi|218187998|gb|EEC70425.1| hypothetical protein OsI_01431 [Oryza sativa Indica Group]
Length = 348
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 78/234 (33%), Positives = 106/234 (45%), Gaps = 23/234 (9%)
Query: 47 SFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMF-Y 105
S + F P +I + RF+ S +H S H FNM +L+ G +LE MGSV
Sbjct: 72 SLNRVAFNPHLIIHYCDLTRFFLSAFYHLSETHFFFNMSSLLWKGIQLETSMGSVEFASM 131
Query: 106 ITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRS 165
+ LL S I LL L+ F + D+ A+GFSGV+F + V+ L+
Sbjct: 132 VAALLGMSQGITLLLSKGLLL---FGNDEAYYDQYAVGFSGVLFGMKVV---LNAWSDDY 185
Query: 166 VF--GLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYS 223
VF G+ IPAK+ L+L Q + SL+GHL GIL+G AY L SF
Sbjct: 186 VFLHGVV-IPAKYAAWAELLLIQAFIPGTSLIGHLGGILAGLAY-------LWLKRSFSG 237
Query: 224 AIESSSLLS---TCIRQP-KFI--LCTGGNPSGYIPTYSGQNTSSSGLFSGNIW 271
S L+S +R P F+ L G P GY P+ S+ IW
Sbjct: 238 PDPLSLLISGIGKAVRWPVGFVQKLFRSGRPQGYTPSRGRVGRGSARENGRGIW 291
>gi|358248954|ref|NP_001240224.1| uncharacterized protein LOC100816495 [Glycine max]
gi|255640981|gb|ACU20770.1| unknown [Glycine max]
Length = 322
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 98/188 (52%), Gaps = 7/188 (3%)
Query: 23 PFFTSAVVIVCGTIYLICLLFG--YDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHV 80
P FT+A++ IYL ++ F P ++ + RF S +H H+
Sbjct: 32 PPFTAALIAANTLIYLRPSFLDPLIPPIEQVWFNPHLILKNKDLKRFLLSPFYHIGEPHL 91
Query: 81 LFNMLALVPLGSELERIMGSVRMFYITI-LLATSNAILHLLIALLVAHIPFYRLQNVMDE 139
++NML+L+ G +LE MGSV I LL S + +L L+ + R + E
Sbjct: 92 VYNMLSLLWKGFQLETSMGSVDFASIVASLLVLSQGVTLMLSKSLLLFFDYER--SYYSE 149
Query: 140 CAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLC 199
++GFSGV+F++ V+ S S + SV+G+ +P+++ LVL Q+L+ VS LGHL
Sbjct: 150 YSVGFSGVLFAMKVVLNSQSENYT-SVYGII-VPSRYAAWAELVLAQLLVPGVSFLGHLG 207
Query: 200 GILSGFAY 207
GIL+G Y
Sbjct: 208 GILAGLLY 215
>gi|290978551|ref|XP_002671999.1| predicted protein [Naegleria gruberi]
gi|284085572|gb|EFC39255.1| predicted protein [Naegleria gruberi]
Length = 230
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 75/143 (52%), Gaps = 28/143 (19%)
Query: 93 ELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFY-------------------RL 133
E R S ++ TI++ +IL +IA L+++I Y +
Sbjct: 11 ETGRFNSSTKLIVCTIIVVFLESILEAIIAFLISNISHYGFGYNVRLSKFEHKGKGSASI 70
Query: 134 QNVMD---------ECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVL 184
+MD EC+IGFSGVIFS + I ++ + + S+FG+ ++P+K+YP ILL++
Sbjct: 71 SGIMDGLAQFFGLHECSIGFSGVIFSYLTIASTDTSQTTNSLFGMISVPSKYYPWILLLV 130
Query: 185 FQVLMTNVSLLGHLCGILSGFAY 207
L + S +GHL GI+SG+ +
Sbjct: 131 TSFLFPSSSFVGHLFGIISGYIF 153
>gi|148670186|gb|EDL02133.1| rhomboid domain containing 1, isoform CRA_b [Mus musculus]
Length = 296
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 90/221 (40%), Gaps = 17/221 (7%)
Query: 45 YDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMF 104
+ Y C + R S + HG H+ FNM++++ G +LER +GS
Sbjct: 46 WKPLYHSCISVEKCYQQKDWQRLLLSPLHHGDDWHLYFNMVSMLWKGVKLERRLGSRWFA 105
Query: 105 YITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSR 164
Y+ + +++LL+ VA + + CA+GFSGV+F+L V+
Sbjct: 106 YVIATFSLLTGVVYLLLQFTVAEL--LNQPDFKRNCAVGFSGVLFALKVLSNHYCPGGFV 163
Query: 165 SVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSA 224
++ G F +P ++ LV S GHL GIL G YT G +M + S
Sbjct: 164 NILG-FPVPNRFACWAELVAIHFCTPGTSFAGHLAGILVGLMYTQGPLKKIMDTCAGPSG 222
Query: 225 IESSSLLSTCIRQPKFILCTGGNPSGYIPTYSGQNTSSSGL 265
++ G P Y TY + ++GL
Sbjct: 223 YQNHY--------------ADGRPVTYDATYRNYDVYTAGL 249
>gi|403374294|gb|EJY87090.1| hypothetical protein OXYTRI_06350 [Oxytricha trifallax]
Length = 256
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 86/182 (47%), Gaps = 8/182 (4%)
Query: 51 ICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILL 110
IC P V+ Q YR TS HG++ H+ FNM L+ G E+E+ G++ I L
Sbjct: 10 ICLAP--VLDYQQFYRIVTSEFSHGNVAHIFFNMCGLLVFGVEVEKTYGTLYYAMINFWL 67
Query: 111 ATSNAILHLLIALLVAHI--PFYR--LQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSV 166
+ IL L +L+A + YR QN C +G+S ++F L +I + G ++
Sbjct: 68 MMISNILSLAFFMLMAFVIPEEYRGGTQNFF-YCGVGYSNILFGLSII-FAYKGDTQQNF 125
Query: 167 FGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIE 226
GL K+ P ++L + N S +GH G+++G +G +L P + A +
Sbjct: 126 MGLCKFEKKYVPWFYMILIFFTIENSSFIGHFLGMITGLLIKFGGLYVLFPRYEWLRAFD 185
Query: 227 SS 228
Sbjct: 186 DK 187
>gi|9294149|dbj|BAB02051.1| unnamed protein product [Arabidopsis thaliana]
Length = 506
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 85/159 (53%), Gaps = 5/159 (3%)
Query: 50 EICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYIT-I 108
E+ F P + + R + S +H + H+++NM++L+ G +LE MGS +
Sbjct: 234 EVWFNPHLIFKHKDLKRLFLSAFYHVNEPHLVYNMMSLLWKGIKLETSMGSSEFASMVFT 293
Query: 109 LLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFG 168
L+ S + LL L+ + R +E A+GFSGV+F++ V+ S + S SV+G
Sbjct: 294 LIGMSQGVTLLLAKSLLLLFDYDRA--YYNEYAVGFSGVLFAMKVVLNSQAEDYS-SVYG 350
Query: 169 LFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAY 207
+ +P K+ L+L Q+ + N S LGHL GIL+G Y
Sbjct: 351 IL-VPTKYAAWAELILVQMFVPNASFLGHLGGILAGIIY 388
>gi|388508086|gb|AFK42109.1| unknown [Medicago truncatula]
Length = 335
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 89/160 (55%), Gaps = 8/160 (5%)
Query: 50 EICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMF-YITI 108
E+ F ++ + RF+ S +H H++FNM++L+ G LE +GS++ I
Sbjct: 61 EVLFNSHLILKNKDLKRFFLSAFYHLGEPHLVFNMISLLWKGIHLESSIGSLQFASMIAS 120
Query: 109 LLATSNAI-LHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVF 167
LLA S +I L L +L V F+ E A GFSGV+F++ ++ S S + +V+
Sbjct: 121 LLALSQSINLVLSKSLFV----FFDYDRYYYEYAAGFSGVLFAMKIVLNSQSDDYT-NVY 175
Query: 168 GLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAY 207
G+ IP+++ L+L Q+ + NVS LGHL GIL+G Y
Sbjct: 176 GVL-IPSRYAAWAELILIQMFVPNVSFLGHLSGILAGLVY 214
>gi|242057069|ref|XP_002457680.1| hypothetical protein SORBIDRAFT_03g011560 [Sorghum bicolor]
gi|241929655|gb|EES02800.1| hypothetical protein SORBIDRAFT_03g011560 [Sorghum bicolor]
Length = 342
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 81/164 (49%), Gaps = 16/164 (9%)
Query: 61 RFQVYR-FYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHL 119
+F+ ++ F+ S H + +H+ NM L+ G ELE MG+ +L S L
Sbjct: 60 KFRDWKTFFLSPWCHTNEVHLFSNMTTLLWTGVELETSMGTAWPVTGCAILLLSKGCL-- 117
Query: 120 LIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVF---GLFNIPAKW 176
+L+ P+Y DE IGFSGV+F + + S A+S G+ IPAK+
Sbjct: 118 --SLVGNGAPYY------DEFCIGFSGVLFGIKAVSMSAHAAESGDFLHLAGMVVIPAKY 169
Query: 177 YPLILLVLFQVLMTNVSLLGHLCGILSGFAYTY--GFFNLLMPG 218
L+L Q LM N S +GHL GIL+G Y + G FN PG
Sbjct: 170 AVWAELLLVQALMPNTSFVGHLGGILAGHVYLWLKGLFNRPDPG 213
>gi|356565565|ref|XP_003551010.1| PREDICTED: uncharacterized protein At3g17611-like [Glycine max]
Length = 332
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 88/159 (55%), Gaps = 5/159 (3%)
Query: 50 EICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRM-FYITI 108
++ F P ++ + RF S +H H+++NML+L+ G +LE MGSV +
Sbjct: 72 QVWFNPHLILKNKDLKRFLLSPFYHIGEPHLVYNMLSLLWKGFQLETSMGSVNFSSMVAS 131
Query: 109 LLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFG 168
LL S + +L L+ + R + E ++GFSGV+F++ V+ S S + SV+G
Sbjct: 132 LLVLSQGVTLMLSKSLLLFFDYER--SYYSEYSVGFSGVLFAMKVVLNSQSENYT-SVYG 188
Query: 169 LFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAY 207
+ +P+++ LVL Q+L+ VS LGHL GIL+G Y
Sbjct: 189 VI-VPSRYAAWAELVLAQLLVPGVSFLGHLGGILAGLLY 226
>gi|149711182|ref|XP_001496461.1| PREDICTED: rhomboid domain-containing protein 1-like [Equus
caballus]
Length = 316
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 74/171 (43%), Gaps = 3/171 (1%)
Query: 46 DSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFY 105
S Y C + R S H H+ FNM +++ G LER +GS Y
Sbjct: 47 KSLYNSCLSVEKCYQQKDWQRLLLSPFHHADDWHLYFNMASMLWKGINLERRLGSKWFAY 106
Query: 106 ITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRS 165
I I + +++L + +A F + CA+GFSGV+F+L V+ +
Sbjct: 107 IIITFSLLTGVVYLFLEFALAE--FMDEPDFRRNCAVGFSGVLFALKVLNNHYCPGGFVN 164
Query: 166 VFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLM 216
V G F +P K+ LV + S GHL GIL G YT+G +M
Sbjct: 165 VLG-FPVPNKFACWAELVAIHFISPGTSFAGHLAGILVGLMYTHGPLKKIM 214
>gi|332251234|ref|XP_003274752.1| PREDICTED: uncharacterized protein LOC100579431 isoform 1 [Nomascus
leucogenys]
gi|332251236|ref|XP_003274753.1| PREDICTED: uncharacterized protein LOC100579431 isoform 2 [Nomascus
leucogenys]
Length = 316
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 75/168 (44%), Gaps = 3/168 (1%)
Query: 49 YEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITI 108
Y C + R S + H H+ FNM +++ G LER +GS Y+
Sbjct: 50 YSSCLSVEKCYQQKDWQRLLLSPLHHADDWHLYFNMASMLWKGINLERRLGSRWFAYVIS 109
Query: 109 LLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFG 168
+ +++LL+ VA F + CA+GFSGV+F+L V+ ++ G
Sbjct: 110 TFSVLTGVVYLLLQFAVAE--FMDEPDFKRSCAVGFSGVLFALKVLNNHYCPGGFVNILG 167
Query: 169 LFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLM 216
F +P ++ + LV +L S GHL GIL G YT G +M
Sbjct: 168 -FPVPNRFACWVELVAIHLLSPGTSFAGHLAGILVGLMYTQGPLKTIM 214
>gi|326489153|dbj|BAK01560.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 342
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 97/199 (48%), Gaps = 22/199 (11%)
Query: 21 SIPFFTSAVVIVCGTIYLICLLFGYDSFY----EICFLPSAVISRFQVYRFYTSIVFHGS 76
S P T+A++ +YL D+F + F P +I + RF+ S +H S
Sbjct: 43 SRPPVTAALIAANALVYLRPGAL--DAFLPPLSRVAFNPHLIIQYGDLTRFFLSAFYHLS 100
Query: 77 LLHVLFNMLALVPLGSELERIMGSVRMF-YITILLATSNAILHLLIALLVA---HIPFYR 132
H +NM +L+ G +LE MGSV +T LL S LL L+ +P+Y
Sbjct: 101 ETHFFYNMTSLLWKGIQLETSMGSVEFASMVTALLGLSQGFTLLLSKGLLLLGNEVPYY- 159
Query: 133 LQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVF--GLFNIPAKWYPLILLVLFQVLMT 190
D+ A+GFSGV+F + ++ L+ VF G+ IPAK+ L+L Q +
Sbjct: 160 -----DQYAVGFSGVLFGMKIV---LNAWSDDYVFLHGMV-IPAKYAAWAELLLIQAFIP 210
Query: 191 NVSLLGHLCGILSGFAYTY 209
S +GHL GIL+G AY +
Sbjct: 211 GTSFIGHLSGILAGLAYLW 229
>gi|13529623|gb|AAH05518.1| Rhomboid domain containing 1 [Mus musculus]
Length = 315
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 76/172 (44%), Gaps = 3/172 (1%)
Query: 45 YDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMF 104
+ Y C + R S + HG H+ FNM++++ G +LER +GS
Sbjct: 46 WKPLYHSCISVEKCYQQKDWQRLLLSPLHHGDDWHLYFNMVSMLWKGVKLERRLGSRWFA 105
Query: 105 YITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSR 164
Y+ + +++LL+ VA + + CA+GFSGV+F+L V+
Sbjct: 106 YVIATFSLLTGVVYLLLQFTVAEL--MNQPDFKRNCAVGFSGVLFALKVLSNHYCPGGFV 163
Query: 165 SVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLM 216
++ G F +P ++ LV S GHL GIL G YT G +M
Sbjct: 164 NILG-FPVPNRFACWAELVAIHFCTPGTSFAGHLAGILVGLMYTQGPLKKIM 214
>gi|170014730|ref|NP_084053.3| rhomboid-related protein 4 [Mus musculus]
gi|170014732|ref|NP_001116157.1| rhomboid-related protein 4 [Mus musculus]
gi|81896101|sp|Q8BHC7.1|RHBL4_MOUSE RecName: Full=Rhomboid-related protein 4; Short=RRP4; AltName:
Full=Rhomboid domain-containing protein 1;
Short=mRHBDD1; AltName: Full=Rhomboid-like protein 4
gi|26325686|dbj|BAC26597.1| unnamed protein product [Mus musculus]
gi|26345628|dbj|BAC36465.1| unnamed protein product [Mus musculus]
gi|26347997|dbj|BAC37647.1| unnamed protein product [Mus musculus]
gi|64213941|gb|AAY41235.1| MSD-50 [Mus musculus]
gi|74209284|dbj|BAE25005.1| unnamed protein product [Mus musculus]
gi|148670185|gb|EDL02132.1| rhomboid domain containing 1, isoform CRA_a [Mus musculus]
gi|148670187|gb|EDL02134.1| rhomboid domain containing 1, isoform CRA_a [Mus musculus]
Length = 315
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 76/172 (44%), Gaps = 3/172 (1%)
Query: 45 YDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMF 104
+ Y C + R S + HG H+ FNM++++ G +LER +GS
Sbjct: 46 WKPLYHSCISVEKCYQQKDWQRLLLSPLHHGDDWHLYFNMVSMLWKGVKLERRLGSRWFA 105
Query: 105 YITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSR 164
Y+ + +++LL+ VA + + CA+GFSGV+F+L V+
Sbjct: 106 YVIATFSLLTGVVYLLLQFTVAEL--LNQPDFKRNCAVGFSGVLFALKVLSNHYCPGGFV 163
Query: 165 SVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLM 216
++ G F +P ++ LV S GHL GIL G YT G +M
Sbjct: 164 NILG-FPVPNRFACWAELVAIHFCTPGTSFAGHLAGILVGLMYTQGPLKKIM 214
>gi|12853402|dbj|BAB29735.1| unnamed protein product [Mus musculus]
Length = 315
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 76/172 (44%), Gaps = 3/172 (1%)
Query: 45 YDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMF 104
+ Y C + R S + HG H+ FNM++++ G +LER +GS
Sbjct: 46 WKPLYHSCISVEKCYQQKDWQRLLLSPLHHGDDWHLYFNMVSMLWKGVKLERRLGSRWFA 105
Query: 105 YITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSR 164
Y+ + +++LL+ VA + + CA+GFSGV+F+L V+
Sbjct: 106 YVIATFSLLTGVVYLLLQFTVAEL--LNQPDFKRNCAVGFSGVLFALKVLSNHYCPGGFV 163
Query: 165 SVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLM 216
++ G F +P ++ LV S GHL GIL G YT G +M
Sbjct: 164 NILG-FPVPNRFACWAELVAIHFCTPGTSFAGHLAGILVGLMYTQGPLKKIM 214
>gi|348676100|gb|EGZ15918.1| hypothetical protein PHYSODRAFT_507191 [Phytophthora sojae]
Length = 326
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 86/159 (54%), Gaps = 5/159 (3%)
Query: 49 YEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITI 108
Y +C P V+S + R S + H H+ NM++ + G LE +GSVR F +T+
Sbjct: 68 YSLC--PDRVLSNWDWERIVASGLIHVDDWHLYHNMISFLWKGYNLEYKLGSVR-FLLTV 124
Query: 109 LLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFG 168
+ +++ LV F ++ + +C++GFSGV+F+L V+ S A SV+G
Sbjct: 125 GYLLVLCHVLVVVVALVLATGF-QMPAPLHQCSVGFSGVLFALKVLLNHNSPAFFSSVYG 183
Query: 169 LFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAY 207
F +P K+ + LV+ L+ S +GH+CGIL+G+ +
Sbjct: 184 -FQVPTKYTAWLELVVIHFLVPRSSFMGHMCGILAGYIF 221
>gi|426338762|ref|XP_004033341.1| PREDICTED: rhomboid-related protein 4 [Gorilla gorilla gorilla]
Length = 315
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 3/168 (1%)
Query: 49 YEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITI 108
Y C + R S + H H+ FNM +++ G LER +GS Y+
Sbjct: 50 YSSCLSVEKCYQQKDWQRLLLSPLHHADDWHLYFNMASMLWKGINLERRLGSRWFAYVIT 109
Query: 109 LLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFG 168
+ +++LL+ VA F + CA+GFSGV+F+L V+ ++ G
Sbjct: 110 TFSVLTGVVYLLLQFAVAE--FMDEPDFKRSCAVGFSGVLFALKVLNNHYCPGGFVNILG 167
Query: 169 LFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLM 216
F +P ++ + LV + S GHL GIL G YT G +M
Sbjct: 168 -FPVPNRFACWVELVAIHLFSPGTSFAGHLAGILVGLMYTQGPLKKIM 214
>gi|410036272|ref|XP_003950028.1| PREDICTED: rhomboid-related protein 4 [Pan troglodytes]
gi|410211256|gb|JAA02847.1| rhomboid domain containing 1 [Pan troglodytes]
gi|410266108|gb|JAA21020.1| rhomboid domain containing 1 [Pan troglodytes]
gi|410301220|gb|JAA29210.1| rhomboid domain containing 1 [Pan troglodytes]
gi|410339123|gb|JAA38508.1| rhomboid domain containing 1 [Pan troglodytes]
Length = 315
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 3/168 (1%)
Query: 49 YEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITI 108
Y C + R S + H H+ FNM +++ G LER +GS Y+
Sbjct: 50 YSSCLSVEKCYQQKDWQRLLLSPLHHADDWHLYFNMASMLWKGINLERRLGSRWFAYVIT 109
Query: 109 LLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFG 168
+ +++LL+ VA F + CA+GFSGV+F+L V+ ++ G
Sbjct: 110 TFSVLTGVVYLLLQFAVAE--FMDEPDFKRSCAVGFSGVLFALKVLNNHYCPGGFVNILG 167
Query: 169 LFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLM 216
F +P ++ + LV + S GHL GIL G YT G +M
Sbjct: 168 -FPVPNRFACWVELVAIHLFSPGTSFAGHLAGILVGLMYTQGPLKKIM 214
>gi|33300639|ref|NP_115652.2| rhomboid-related protein 4 [Homo sapiens]
gi|263190666|ref|NP_001161080.1| rhomboid-related protein 4 [Homo sapiens]
gi|74723955|sp|Q8TEB9.1|RHBL4_HUMAN RecName: Full=Rhomboid-related protein 4; Short=RRP4; AltName:
Full=Rhomboid domain-containing protein 1; AltName:
Full=Rhomboid-like protein 4
gi|18676811|dbj|BAB85031.1| unnamed protein product [Homo sapiens]
gi|51947534|gb|AAU14246.1| HSD-50 [Homo sapiens]
gi|71680537|gb|AAI01265.1| Rhomboid domain containing 1 [Homo sapiens]
gi|71682034|gb|AAI01264.1| Rhomboid domain containing 1 [Homo sapiens]
gi|71682037|gb|AAI01266.1| Rhomboid domain containing 1 [Homo sapiens]
gi|83405869|gb|AAI11057.1| Rhomboid domain containing 1 [Homo sapiens]
gi|119591247|gb|EAW70841.1| rhomboid domain containing 1, isoform CRA_a [Homo sapiens]
gi|119591248|gb|EAW70842.1| rhomboid domain containing 1, isoform CRA_a [Homo sapiens]
Length = 315
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 3/168 (1%)
Query: 49 YEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITI 108
Y C + R S + H H+ FNM +++ G LER +GS Y+
Sbjct: 50 YSSCLSVEKCYQQKDWQRLLLSPLHHADDWHLYFNMASMLWKGINLERRLGSRWFAYVIT 109
Query: 109 LLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFG 168
+ +++LL+ VA F + CA+GFSGV+F+L V+ ++ G
Sbjct: 110 AFSVLTGVVYLLLQFAVAE--FMDEPDFKRSCAVGFSGVLFALKVLNNHYCPGGFVNILG 167
Query: 169 LFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLM 216
F +P ++ + LV + S GHL GIL G YT G +M
Sbjct: 168 -FPVPNRFACWVELVAIHLFSPGTSFAGHLAGILVGLMYTQGPLKKIM 214
>gi|297830378|ref|XP_002883071.1| hypothetical protein ARALYDRAFT_898103 [Arabidopsis lyrata subsp.
lyrata]
gi|297328911|gb|EFH59330.1| hypothetical protein ARALYDRAFT_898103 [Arabidopsis lyrata subsp.
lyrata]
Length = 335
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 85/159 (53%), Gaps = 5/159 (3%)
Query: 50 EICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITI- 108
E+ F P + + R + S +H + H+++NM++L+ G +LE MGS +
Sbjct: 63 EVWFNPHLIFKHKDLKRLFLSAFYHVNEPHLVYNMMSLLWKGIKLETSMGSSEFASMVFT 122
Query: 109 LLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFG 168
L+ S + LL L+ + R +E A+GFSGV+F+L V+ S + S SV+G
Sbjct: 123 LIGMSQGVTLLLAKSLLVLFDYDR--AYYNEYAVGFSGVLFALKVVLNSQAEDYS-SVYG 179
Query: 169 LFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAY 207
+ +P K+ L+L Q+ + N S LGHL GIL+G Y
Sbjct: 180 IL-VPTKYAAWAELILVQMFVPNASFLGHLGGILAGIIY 217
>gi|71682851|gb|AAI01263.1| Rhomboid domain containing 1 [Homo sapiens]
Length = 315
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 3/168 (1%)
Query: 49 YEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITI 108
Y C + R S + H H+ FNM +++ G LER +GS Y+
Sbjct: 50 YSSCLSVEKCYQQKDWQRLLLSPLHHADDWHLYFNMASMLWKGINLERRLGSRWFAYVIT 109
Query: 109 LLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFG 168
+ +++LL+ VA F + CA+GFSGV+F+L V+ ++ G
Sbjct: 110 AFSVLTGVVYLLLQFAVAE--FMDEPDFKRSCAVGFSGVLFALKVLNNHYCPGGFVNILG 167
Query: 169 LFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLM 216
F +P ++ + LV + S GHL GIL G YT G +M
Sbjct: 168 -FPVPNRFACWVELVAIHLFSPGTSFAGHLAGILVGLMYTQGPLKKIM 214
>gi|73994096|ref|XP_543275.2| PREDICTED: rhomboid domain-containing protein 1 [Canis lupus
familiaris]
Length = 316
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 3/168 (1%)
Query: 49 YEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITI 108
YE C + R S + H H+ FNM +++ G LER +GS YI +
Sbjct: 50 YESCLSVEKCYQQKDWQRLLLSPLHHADDWHLYFNMASMLWKGINLERRLGSRWFAYIIV 109
Query: 109 LLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFG 168
+ +++L + +A F CA+GFSGV+F+L V+ ++ G
Sbjct: 110 TFSLLTGVVYLFLEFALAE--FTDEPGFRRNCAVGFSGVLFALKVLNNHYCPGGFANILG 167
Query: 169 LFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLM 216
F +P ++ LV + S GHL GIL G YT+G +M
Sbjct: 168 -FPVPNRFACWAELVAIHFISPGTSFAGHLAGILVGLMYTHGPLKKIM 214
>gi|334347379|ref|XP_001373833.2| PREDICTED: rhomboid domain-containing protein 1-like [Monodelphis
domestica]
Length = 336
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 12/202 (5%)
Query: 29 VVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALV 88
V + C + + L F+ +C + + R S H H+ FNM +L+
Sbjct: 30 VTLACLALNVWLFLSPLKPFHWVCLSVESCYEKKDWQRLLLSPFHHVDDWHLYFNMASLL 89
Query: 89 PLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHI---PFYRLQNVMDECAIGFS 145
G LER +GS Y+ + + +++L + +A + P Y++ C IGFS
Sbjct: 90 WKGLTLERRLGSFWFAYVISVFSILIGVIYLALEYSLAELLDQPEYKMH-----CTIGFS 144
Query: 146 GVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGF 205
GV+F+L V+ + + ++ GL+ IP K+ + L++ +L S GHL GI+ G
Sbjct: 145 GVLFALKVLNNNYNPGGHTNIMGLY-IPNKYACWMELLMIHLLTPKTSFAGHLAGIIVGL 203
Query: 206 AYTYGFFNLLMP---GTSFYSA 224
Y G +M G F+ A
Sbjct: 204 LYVLGPLKRIMKAGAGIFFFDA 225
>gi|397502459|ref|XP_003821875.1| PREDICTED: rhomboid domain-containing protein 1 [Pan paniscus]
Length = 315
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 3/168 (1%)
Query: 49 YEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITI 108
Y C + R S + H H+ FNM +++ G LER +GS Y+
Sbjct: 50 YSSCLSVEKCYQQKDWQRLLLSPLHHADDWHLYFNMASMLWKGINLERRLGSRWFAYVIT 109
Query: 109 LLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFG 168
+ +++LL+ VA F + CA+GFSGV+F+L V+ ++ G
Sbjct: 110 TFSVLTGVVYLLLQFAVAE--FMDEPDFKRSCAVGFSGVLFALKVLNNHYCPGGFVNILG 167
Query: 169 LFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLM 216
F +P ++ + LV + S GHL GIL G YT G +M
Sbjct: 168 -FPVPNRFACWVELVAIHLFSPGTSFAGHLAGILVGLMYTQGPVKKIM 214
>gi|30684602|ref|NP_850606.1| rhomboid-like protein 14 [Arabidopsis thaliana]
gi|75247670|sp|Q8RXW0.1|Y3761_ARATH RecName: Full=Uncharacterized protein At3g17611
gi|19310562|gb|AAL85014.1| unknown protein [Arabidopsis thaliana]
gi|21436261|gb|AAM51269.1| unknown protein [Arabidopsis thaliana]
gi|332642458|gb|AEE75979.1| rhomboid-like protein 14 [Arabidopsis thaliana]
Length = 334
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 85/159 (53%), Gaps = 5/159 (3%)
Query: 50 EICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITI- 108
E+ F P + + R + S +H + H+++NM++L+ G +LE MGS +
Sbjct: 62 EVWFNPHLIFKHKDLKRLFLSAFYHVNEPHLVYNMMSLLWKGIKLETSMGSSEFASMVFT 121
Query: 109 LLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFG 168
L+ S + LL L+ + R +E A+GFSGV+F++ V+ S + S SV+G
Sbjct: 122 LIGMSQGVTLLLAKSLLLLFDYDRA--YYNEYAVGFSGVLFAMKVVLNSQAEDYS-SVYG 178
Query: 169 LFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAY 207
+ +P K+ L+L Q+ + N S LGHL GIL+G Y
Sbjct: 179 IL-VPTKYAAWAELILVQMFVPNASFLGHLGGILAGIIY 216
>gi|444730882|gb|ELW71255.1| Rhomboid domain-containing protein 1 [Tupaia chinensis]
Length = 278
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 75/165 (45%), Gaps = 9/165 (5%)
Query: 66 RFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLV 125
R S + H H+ FNM +++ G LER +GS R Y+ + +++LL+ V
Sbjct: 67 RLLLSPLHHADDWHLYFNMASMLWKGVHLERRLGSRRFAYVISTFSLLTGVVYLLLQFAV 126
Query: 126 AHI---PFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILL 182
A P YR CA+GFSGV+F+L V+ +V G F +P K+ L
Sbjct: 127 AEFMDEPDYR-----KSCAVGFSGVLFALKVLNNHYFPGGFVNVLG-FPVPNKFACWAEL 180
Query: 183 VLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIES 227
V S GHL GIL G YT G ++ + +S +
Sbjct: 181 VAIHFFSPGTSFAGHLAGILVGLMYTQGPLKKILEACAGHSGYQD 225
>gi|387018080|gb|AFJ51158.1| Rhomboid domain-containing protein 1-like [Crotalus adamanteus]
Length = 310
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 9/170 (5%)
Query: 50 EICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITIL 109
+ C + + + +R Y S H H+ FNM++L+ G +LE +G++ YI L
Sbjct: 51 KACISVNYCLYKKDWHRLYLSAFHHADDWHLYFNMVSLLWKGIKLESRLGTMWFGYIIAL 110
Query: 110 LATSNAILHLLIALLVAHI---PFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSV 166
+ +++ + ++A + P Y CA+GFSGV+F+L V+ S ++
Sbjct: 111 FSLLVGAVYIFLEAVLAELLGNPSYE-----HHCAVGFSGVLFALKVLNNYYHPGGSTNI 165
Query: 167 FGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLM 216
GL N+ K+ + L+ +L S GHL GIL G YT G + M
Sbjct: 166 MGL-NVSNKYSCWLELLAIHLLNPQSSFAGHLAGILVGLMYTMGPLKMFM 214
>gi|255645151|gb|ACU23074.1| unknown [Glycine max]
Length = 234
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 98/188 (52%), Gaps = 7/188 (3%)
Query: 23 PFFTSAVVIVCGTIYLICLLFG--YDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHV 80
P FT+A++ IYL ++ F P ++ + RF S +H H+
Sbjct: 32 PPFTAALITANTLIYLRPSFLDPLIPPIEQVWFNPHLILKNKDLKRFLLSPFYHIGEPHL 91
Query: 81 LFNMLALVPLGSELERIMGSVRMFYITI-LLATSNAILHLLIALLVAHIPFYRLQNVMDE 139
++NML+L+ G +LE MGSV I LL S + +L L+ + R + E
Sbjct: 92 VYNMLSLLWKGFQLETSMGSVDFASIVASLLVLSQGVTLMLSKSLLLFFDYER--SYYSE 149
Query: 140 CAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLC 199
++GFSGV+F++ V+ S S + SV+G+ +P+++ LVL Q+L+ VS LGHL
Sbjct: 150 YSVGFSGVLFAMKVVLNSQSENYT-SVYGII-VPSRYAAWAELVLAQLLVPGVSFLGHLG 207
Query: 200 GILSGFAY 207
GIL+G Y
Sbjct: 208 GILAGLLY 215
>gi|255556632|ref|XP_002519350.1| conserved hypothetical protein [Ricinus communis]
gi|223541665|gb|EEF43214.1| conserved hypothetical protein [Ricinus communis]
Length = 325
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%), Gaps = 13/166 (7%)
Query: 47 SFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMF-Y 105
S +++ F P ++ + RF+ S +H H+++NM++L+ G +LE MGSV
Sbjct: 57 SIHDVWFNPYLILKDGDLKRFFLSAFYHVGESHLVYNMMSLLWKGIQLETSMGSVEFASM 116
Query: 106 ITILLATSNAILHLLIALLVAHI----PFYRLQNVMDECAIGFSGVIFSLIVIETSLSGA 161
+ LL S I LL L+ PFY E A+GFSGV+F++ V+ S S
Sbjct: 117 VAALLTMSQGITLLLAKSLLLFFDYGRPFY------SEYAVGFSGVLFAMKVVLNSQSDN 170
Query: 162 QSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAY 207
+ V GL +PA+ L+L Q+ + VS LGHL GIL+G Y
Sbjct: 171 YTH-VHGLV-VPARHAAWAELILIQMFVPGVSFLGHLGGILAGILY 214
>gi|225560885|gb|EEH09166.1| rhomboid protein [Ajellomyces capsulatus G186AR]
Length = 895
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 103/223 (46%), Gaps = 16/223 (7%)
Query: 22 IPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVL 81
+P FT V+ V +++ + +D +PS +YR T H L H +
Sbjct: 22 LPLFTRVVIFVIAVFWVLGIQSLWDVVQWGALIPSET-GFGSLYRLNTYPFIHNGLFHTI 80
Query: 82 FNMLALVPLGSELERIMGSVRMFYITI-LLATSNAILHLLIALLVAHIPFYRLQNVMDEC 140
+N+LAL PL E G++ + I L+T A L+LL F ++ +
Sbjct: 81 WNVLALTPLLERFEAEHGTLTSVALFIGPLSTLPAGLYLL---------FEKVILRGNTT 131
Query: 141 AIGFSGVIFSLIVIETSLSGAQSRS--VFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHL 198
A+G S IF L+ IE ++ Q+ V G++ IP PL L++L L+ N SLLGHL
Sbjct: 132 ALGSSVWIFLLLGIE-AIKTFQTNPHFVIGIYRIPTWTTPLFLIILVFALIPNTSLLGHL 190
Query: 199 CGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFI 241
G+ G+ + G+ L+P IE L+ R P ++
Sbjct: 191 SGLAVGYIFGLGYLKFLVPPEKILRWIERK--LNLLARLPHYV 231
>gi|255076269|ref|XP_002501809.1| predicted protein [Micromonas sp. RCC299]
gi|226517073|gb|ACO63067.1| predicted protein [Micromonas sp. RCC299]
Length = 399
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 105/221 (47%), Gaps = 14/221 (6%)
Query: 35 TIYLICLL---FGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLG 91
+ +++CLL FG D + P +I + Q++R TSI + L++ L L LG
Sbjct: 25 STWIVCLLNPIFGVDDL--LVASPYDIIRKGQLWRLVTSIAYVPGLINALIMSFVLYRLG 82
Query: 92 SELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSL 151
S E+ GS+R+ +L + + ++A+LVA + +VM + G++ +
Sbjct: 83 SAWEQERGSIRILCYFLLAIVATNVGVCVLAILVAPLA----PSVMSPAFLCGPGILSAF 138
Query: 152 IVIETSLS---GAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYT 208
+V+ T S S S+ GLF +P ++PL+LLV F + N L + G+A+
Sbjct: 139 LVLITRSSQGYAGASVSILGLFTMPTLYFPLLLLVFFAMFGANP--LESAASVGVGYAWA 196
Query: 209 YGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFILCTGGNPS 249
G+ + ++P +A+E + +R ++ P+
Sbjct: 197 RGYLDPVVPSDETLAAMEQWPAAAGLVRARGYVSVAAAGPT 237
>gi|301768701|ref|XP_002919769.1| PREDICTED: rhomboid domain-containing protein 1-like [Ailuropoda
melanoleuca]
Length = 316
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 82/185 (44%), Gaps = 12/185 (6%)
Query: 49 YEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITI 108
+E C + R S + H H+ FNM +++ G LER +GS YI +
Sbjct: 50 FESCLSVEKCYQQKDWQRLLLSPLHHADDWHLYFNMASMLWKGINLERRLGSRWFAYIIV 109
Query: 109 LLATSNAILHLLIALLVAH---IPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRS 165
+ +++L + +A P +R CA+GFSGV+F+L V+ +
Sbjct: 110 TFSVLTGVVYLFLEFALAESMGEPGFR-----RNCAVGFSGVLFALKVLNNHYCPGGFAN 164
Query: 166 VFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAI 225
V G F +P ++ LV + S GHL GIL G YT+G +M + I
Sbjct: 165 VLG-FPVPNRFACWAELVAIHFISPGTSFAGHLAGILVGLMYTHGPLKKIMEKC---AGI 220
Query: 226 ESSSL 230
SSS+
Sbjct: 221 SSSSM 225
>gi|67846060|ref|NP_001020062.1| rhomboid-related protein 4 [Rattus norvegicus]
gi|81908697|sp|Q4V8F3.1|RHBL4_RAT RecName: Full=Rhomboid-related protein 4; Short=RRP4; AltName:
Full=Rhomboid domain-containing protein 1;
Short=rRHBDD1; AltName: Full=Rhomboid-like protein 4
gi|66910605|gb|AAH97416.1| Rhomboid domain containing 1 [Rattus norvegicus]
Length = 316
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 93/229 (40%), Gaps = 14/229 (6%)
Query: 45 YDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMF 104
+ Y C + R S V HG H+ FNM++++ G +LE+ +GS
Sbjct: 46 WKPLYHSCISVEKCYQQNDWQRLLLSPVHHGDDWHLYFNMVSMLWKGVKLEKRLGSRWFA 105
Query: 105 YITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSR 164
YI + +++LL+ A + + CA+GFSGV+F+L V+
Sbjct: 106 YIIATFSLLTGVVYLLLQFASAEL--MNQPDFKRNCAVGFSGVLFALKVLSNHYCPGGFV 163
Query: 165 SVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTS--FY 222
++ G F +P ++ L S GHL GIL G YT G +M + F
Sbjct: 164 NILG-FPVPNRFACWAELAAIHFCTPGTSFAGHLAGILVGLMYTQGPLKKIMDACAGIFI 222
Query: 223 SAIESSSL------LSTCIRQPKFILCTGGNPSGYIPTYSGQNTSSSGL 265
S SS Q ++ T G P Y TY + ++GL
Sbjct: 223 SNAGSSGQQYHFNNAGPSGYQNRY---TDGRPVNYEATYRNYDIYTAGL 268
>gi|358394263|gb|EHK43656.1| hypothetical protein TRIATDRAFT_300138 [Trichoderma atroviride IMI
206040]
Length = 263
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 100/221 (45%), Gaps = 13/221 (5%)
Query: 10 GLST-RANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFY 68
G ST RA + +P FT A+++ +L L +D +P IS YR
Sbjct: 6 GFSTQRARSYLFRLPLFTRAILLSIACFWLATLPGLWDVRVWGSLIPDK-ISFASGYRLN 64
Query: 69 TSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITI-LLATSNAILHLLIALLVAH 127
T + H + +H L N +AL PL E G++ + L T A+L+LLI +LV
Sbjct: 65 TFPLIHLNFIHALLNAIALTPLMERFESEYGTLTTLALFFGPLTTIPAVLYLLIEILVLR 124
Query: 128 IPFYRLQNVMDECAIGFSGVIFSLIVIETSLS-GAQSRSVFGLFNIPAKWYPLILLVLFQ 186
+ +G S +F L+ +E + V G + +P PL+++V+
Sbjct: 125 ---------ANNAVMGASMWVFLLLGMEAIRTYKTNPYLVIGTYQLPTWTTPLLMIVVVA 175
Query: 187 VLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIES 227
LM + SLLGHLCG+ G+ G+ LL P +ES
Sbjct: 176 ALMPSTSLLGHLCGVGVGYIAGLGYVKLLAPPEWALRWVES 216
>gi|291392324|ref|XP_002712556.1| PREDICTED: rhomboid domain containing 1 [Oryctolagus cuniculus]
Length = 316
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 70/151 (46%), Gaps = 3/151 (1%)
Query: 66 RFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLV 125
R S V H H+ FNM++++ G LER +GS YI + +++LL+ +
Sbjct: 67 RLLLSPVHHADDWHLYFNMVSMLWKGVNLERRLGSKWFAYIIATFSLLTGVVYLLLQFVF 126
Query: 126 AHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLF 185
A F + CA+GFSGV+F+L V+ ++ G F +P ++ LV
Sbjct: 127 AE--FMNEPDYRRNCAVGFSGVLFALKVLNNHYCPGGFVNILG-FPVPNRFACWAELVAI 183
Query: 186 QVLMTNVSLLGHLCGILSGFAYTYGFFNLLM 216
S GHL GIL G YT G +M
Sbjct: 184 HFFTPGSSFSGHLAGILVGLMYTQGPLKKMM 214
>gi|342885334|gb|EGU85375.1| hypothetical protein FOXB_04086 [Fusarium oxysporum Fo5176]
Length = 267
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 104/221 (47%), Gaps = 18/221 (8%)
Query: 1 MRPNIVSEAGLSTRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVIS 60
MRP + + L RA + +P FT +++ + + L ++ +P IS
Sbjct: 1 MRPRLQNFNAL--RARSYLTRLPLFTRLIIVAIVALSIASLQSVWNLREWGALIPEE-IS 57
Query: 61 RFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMG---SVRMFYITILLATSNAIL 117
YR T + H +++H + N+ AL PL E G S+ +F+ L + A++
Sbjct: 58 ITNAYRLSTFPLIHLNIIHAILNLAALTPLMERFENEHGTLTSLALFFGP--LTSIPAVM 115
Query: 118 HLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLS-GAQSRSVFGLFNIPAKW 176
++LI V H+ + +G S +F+L+ +E+ + V G +IP
Sbjct: 116 YVLIERYVFHV---------NHGVLGASMWVFTLLAMESIQTYKTNPHFVVGTVHIPTWT 166
Query: 177 YPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMP 217
PLI+ ++ + L+ SLLGHLCGI G+ +G+ LL P
Sbjct: 167 TPLIMCMVVRALVPGTSLLGHLCGIAIGYVAGFGYAKLLAP 207
>gi|402889541|ref|XP_003908071.1| PREDICTED: rhomboid domain-containing protein 1, partial [Papio
anubis]
Length = 285
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 75/168 (44%), Gaps = 3/168 (1%)
Query: 49 YEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITI 108
Y C + R S + H + H+ FNM +++ G LER +GS ++
Sbjct: 50 YSSCLSVEKCCQQKDWQRLLLSPLHHANDWHLYFNMASMLWKGIHLERRLGSRWFAFVIT 109
Query: 109 LLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFG 168
+ +++LL+ VA F + CA+GFSGV+F+L V+ ++ G
Sbjct: 110 TFSVLTGVVYLLLQFAVAE--FMDEPDFKRSCAVGFSGVLFALKVLNNHYCPGGFVNILG 167
Query: 169 LFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLM 216
F +P ++ + LV + S GHL GIL G YT G +M
Sbjct: 168 -FPVPNRFACWVELVAIHLFSPGTSFAGHLAGILVGLMYTQGPLKKMM 214
>gi|226528725|ref|NP_001140801.1| uncharacterized protein LOC100272876 [Zea mays]
gi|194701136|gb|ACF84652.1| unknown [Zea mays]
gi|195636066|gb|ACG37501.1| rhomboid domain containing 1 [Zea mays]
gi|413946850|gb|AFW79499.1| Rhomboid domain containing 1 [Zea mays]
Length = 344
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 81/164 (49%), Gaps = 6/164 (3%)
Query: 47 SFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMF-Y 105
S + F P ++ + RF+ S +H S H+ +NM +L+ G +LE MGSV
Sbjct: 67 SVTRVSFNPRLIVENGDLVRFFLSPFYHLSESHLFYNMTSLLWKGIQLETSMGSVEFASM 126
Query: 106 ITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRS 165
+ LL S I LL L+ + D+ A+GFSGV+F++ V+ + S +
Sbjct: 127 VAALLGLSQGIALLLSKGLLLLGDY---TAYYDQYAVGFSGVLFAMKVVLNAWS--EDFV 181
Query: 166 VFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTY 209
IPAK+ L+L QV + S LGHL GIL+G Y +
Sbjct: 182 YLHGMVIPAKYAAWAELILIQVFIPGTSFLGHLSGILAGLVYLW 225
>gi|281342330|gb|EFB17914.1| hypothetical protein PANDA_008422 [Ailuropoda melanoleuca]
Length = 286
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 82/185 (44%), Gaps = 12/185 (6%)
Query: 49 YEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITI 108
+E C + R S + H H+ FNM +++ G LER +GS YI +
Sbjct: 50 FESCLSVEKCYQQKDWQRLLLSPLHHADDWHLYFNMASMLWKGINLERRLGSRWFAYIIV 109
Query: 109 LLATSNAILHLLIALLVAH---IPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRS 165
+ +++L + +A P +R CA+GFSGV+F+L V+ +
Sbjct: 110 TFSVLTGVVYLFLEFALAESMGEPGFR-----RNCAVGFSGVLFALKVLNNHYCPGGFAN 164
Query: 166 VFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAI 225
V G F +P ++ LV + S GHL GIL G YT+G +M + I
Sbjct: 165 VLG-FPVPNRFACWAELVAIHFISPGTSFAGHLAGILVGLMYTHGPLKKIMEKC---AGI 220
Query: 226 ESSSL 230
SSS+
Sbjct: 221 SSSSM 225
>gi|325089170|gb|EGC42480.1| rhomboid protein [Ajellomyces capsulatus H88]
Length = 853
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 103/223 (46%), Gaps = 16/223 (7%)
Query: 22 IPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVL 81
+P F+ V+ V +++ + +D +PS +YR T H L H +
Sbjct: 22 LPLFSRVVIFVIAVFWVLGIQSLWDVVQWGALIPSET-GFGSLYRLNTYPFIHNGLFHTI 80
Query: 82 FNMLALVPLGSELERIMGSVRMFYITI-LLATSNAILHLLIALLVAHIPFYRLQNVMDEC 140
+N+LAL PL E G++ + I L+T A L+LL F ++ +
Sbjct: 81 WNVLALTPLLERFEAEHGTLTSVALFIGPLSTLPAGLYLL---------FEKVILRGNTT 131
Query: 141 AIGFSGVIFSLIVIETSLSGAQSRS--VFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHL 198
A+G S IF L+ IE ++ Q+ V G++ IP PL L++L L+ N SLLGHL
Sbjct: 132 ALGSSVWIFLLLGIE-AIKTFQTNPHFVIGIYRIPTWTTPLFLIILVFALIPNTSLLGHL 190
Query: 199 CGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFI 241
G+ G+ + G+ L+P IE L+ R P ++
Sbjct: 191 SGLAVGYIFGLGYLKFLVPPEKILRWIERK--LNLLARLPHYV 231
>gi|403266722|ref|XP_003925512.1| PREDICTED: rhomboid domain-containing protein 1 [Saimiri
boliviensis boliviensis]
Length = 315
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 74/171 (43%), Gaps = 3/171 (1%)
Query: 46 DSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFY 105
S Y C + R S V H H+ FNM +++ G LE+ +GS
Sbjct: 47 KSLYSSCLSVERCYQQNDWQRLLLSPVHHADDWHLYFNMASMLWKGIHLEKRLGSRWFAC 106
Query: 106 ITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRS 165
+ + +++LL+ VA F + CA+GFSGV+F+L V+ +
Sbjct: 107 VITTFSVLTGVVYLLLQFAVAE--FMDEPDFKRSCAVGFSGVLFALKVLNNHYCPGGFVN 164
Query: 166 VFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLM 216
V G F +P ++ + LV + S GHL GIL G YT G +M
Sbjct: 165 VLG-FPVPNRFACWVELVAIHLCSPGTSFAGHLAGILVGLMYTQGPLKKIM 214
>gi|242057071|ref|XP_002457681.1| hypothetical protein SORBIDRAFT_03g011570 [Sorghum bicolor]
gi|241929656|gb|EES02801.1| hypothetical protein SORBIDRAFT_03g011570 [Sorghum bicolor]
Length = 344
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 83/164 (50%), Gaps = 6/164 (3%)
Query: 47 SFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMF-Y 105
S + F P +I + RF+ S +H S H+ +NM +L+ G +LE MGSV
Sbjct: 67 SLTRVSFNPWLIIEYGDLVRFFLSPFYHLSESHLFYNMTSLLWKGIQLETSMGSVEFASM 126
Query: 106 ITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRS 165
+ LL S I LL L+ + N + A+GFSGV+F++ V+ + S
Sbjct: 127 VAALLGLSQGITLLLSKGLLLLGDYTAYYN---QYAVGFSGVLFAMKVVLNAWS-EDFVY 182
Query: 166 VFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTY 209
+ G+ IPAK+ L+L QV + S LGHL GIL+G Y +
Sbjct: 183 LHGMV-IPAKYAAWAELILIQVFIPGTSFLGHLSGILAGLVYLW 225
>gi|355565238|gb|EHH21727.1| hypothetical protein EGK_04857 [Macaca mulatta]
Length = 316
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 74/168 (44%), Gaps = 3/168 (1%)
Query: 49 YEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITI 108
Y C + R S + H + H+ FNM +++ G LER +GS +
Sbjct: 50 YSSCLSVEKCCQQKDWQRLLLSPLHHANDWHLYFNMASMLWKGIHLERRLGSRWFALVIT 109
Query: 109 LLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFG 168
+ +++LL+ VA F + CA+GFSGV+F+L V+ ++ G
Sbjct: 110 TFSILTGVVYLLLQFAVAE--FMDEPDFKRSCAVGFSGVLFALKVLNNHYCPGGFVNILG 167
Query: 169 LFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLM 216
F +P ++ + LV + S GHL GIL G YT G +M
Sbjct: 168 -FPVPNRFACWVELVAIHLFSPGTSFAGHLAGILVGLMYTQGPLKKMM 214
>gi|242001818|ref|XP_002435552.1| hypothetical protein IscW_ISCW006085 [Ixodes scapularis]
gi|215498888|gb|EEC08382.1| hypothetical protein IscW_ISCW006085 [Ixodes scapularis]
Length = 453
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 90/193 (46%), Gaps = 8/193 (4%)
Query: 20 ESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLH 79
+ IP T A+V+ +L + + S E C V+ R Q +R + HG H
Sbjct: 26 DVIPPVTLAIVVAQACTFLGLVDLPWRSPAEACISVDKVVFRGQWWRILFAAFEHGDSFH 85
Query: 80 VLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHI--PFYRLQNVM 137
+ +NM++ + G +E +GS YI L + + ++ L P + Q
Sbjct: 86 LYYNMVSFIWKGIRMETELGSAYFLYIVCLFTGLTGVTLVGLSYLCGMFVNPSFNYQ--- 142
Query: 138 DECAIGFSGVIFSLIVIETSLSGAQSRSVFGL-FNIPAKWYPLILLVLFQVLMTNVSLLG 196
CA+GFS VIF+L V+ S ++ G+ ++P+ LVL Q++ N S LG
Sbjct: 143 --CAVGFSAVIFALKVLNNHYWPGISPTIMGMSVSMPSGLIVWAELVLIQLVTPNASFLG 200
Query: 197 HLCGILSGFAYTY 209
HL GIL G AY +
Sbjct: 201 HLAGILVGLAYVH 213
>gi|109101279|ref|XP_001110165.1| PREDICTED: rhomboid domain-containing protein 1-like isoform 4
[Macaca mulatta]
gi|297265038|ref|XP_001110119.2| PREDICTED: rhomboid domain-containing protein 1-like isoform 3
[Macaca mulatta]
Length = 316
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 74/168 (44%), Gaps = 3/168 (1%)
Query: 49 YEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITI 108
Y C + R S + H + H+ FNM +++ G LER +GS +
Sbjct: 50 YSSCLSVEKCCQQKDWQRLLLSPLHHANDWHLYFNMASMLWKGIHLERRLGSRWFALVIT 109
Query: 109 LLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFG 168
+ +++LL+ VA F + CA+GFSGV+F+L V+ ++ G
Sbjct: 110 TFSILTGVVYLLLQFAVAE--FMDEPDFKRSCAVGFSGVLFALKVLNNHYCPGGFVNILG 167
Query: 169 LFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLM 216
F +P ++ + LV + S GHL GIL G YT G +M
Sbjct: 168 -FPVPNRFACWVELVAIHLFSPGTSFAGHLAGILVGLMYTQGPLKKMM 214
>gi|355750890|gb|EHH55217.1| hypothetical protein EGM_04375 [Macaca fascicularis]
Length = 316
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 74/168 (44%), Gaps = 3/168 (1%)
Query: 49 YEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITI 108
Y C + R S + H + H+ FNM +++ G LER +GS +
Sbjct: 50 YSSCLSVEKCCQQKDWQRLLLSPLHHANDWHLYFNMASMLWKGIHLERRLGSRWFALVIT 109
Query: 109 LLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFG 168
+ +++LL+ VA F + CA+GFSGV+F+L V+ ++ G
Sbjct: 110 TFSILTGVVYLLLQFAVAE--FMDEPDFKRSCAVGFSGVLFALKVLNNHYCPGGFVNILG 167
Query: 169 LFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLM 216
F +P ++ + LV + S GHL GIL G YT G +M
Sbjct: 168 -FPVPNRFACWVELVAIHLFSPGTSFAGHLAGILVGLMYTQGPLKKMM 214
>gi|225432236|ref|XP_002270713.1| PREDICTED: uncharacterized protein At3g17611 [Vitis vinifera]
gi|147864086|emb|CAN81122.1| hypothetical protein VITISV_038478 [Vitis vinifera]
gi|297736839|emb|CBI26040.3| unnamed protein product [Vitis vinifera]
Length = 328
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 82/159 (51%), Gaps = 5/159 (3%)
Query: 50 EICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMF-YITI 108
++ F P ++ + RF S +H H+++NM++L+ G +LE MGS +
Sbjct: 60 KVWFNPHLILKHKDLKRFLLSPFYHMDEAHLVYNMMSLLWKGIQLETSMGSAEFASMVAT 119
Query: 109 LLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFG 168
LL S I LL L+ + R + A+GFSGV+F++ V+ S S A V G
Sbjct: 120 LLGMSQGITLLLAKSLLLFFDYER--AYYSQFAVGFSGVLFAMKVVLNSQS-ADYTYVHG 176
Query: 169 LFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAY 207
L +P + + L+L Q+ + VS LGHL GIL+G Y
Sbjct: 177 LI-VPTRHAAWVELILIQMFVPGVSFLGHLGGILAGILY 214
>gi|380817122|gb|AFE80435.1| rhomboid domain-containing protein 1 [Macaca mulatta]
gi|380817124|gb|AFE80436.1| rhomboid domain-containing protein 1 [Macaca mulatta]
gi|383422139|gb|AFH34283.1| rhomboid domain-containing protein 1 [Macaca mulatta]
gi|383422141|gb|AFH34284.1| rhomboid domain-containing protein 1 [Macaca mulatta]
gi|384949790|gb|AFI38500.1| rhomboid domain-containing protein 1 [Macaca mulatta]
gi|384949792|gb|AFI38501.1| rhomboid domain-containing protein 1 [Macaca mulatta]
Length = 316
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 74/168 (44%), Gaps = 3/168 (1%)
Query: 49 YEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITI 108
Y C + R S + H + H+ FNM +++ G LER +GS +
Sbjct: 50 YSSCLSVEKCCQQKDWQRLLLSPLHHANDWHLYFNMASMLWKGIHLERRLGSRWFALVIT 109
Query: 109 LLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFG 168
+ +++LL+ VA F + CA+GFSGV+F+L V+ ++ G
Sbjct: 110 TFSILTGVVYLLLQFAVAE--FMDEPDFKRSCAVGFSGVLFALKVLNNHYCPGGFVNILG 167
Query: 169 LFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLM 216
F +P ++ + LV + S GHL GIL G YT G +M
Sbjct: 168 -FPVPNRFACWVELVAIHLFSPGTSFAGHLAGILVGLMYTQGPLKKMM 214
>gi|302843800|ref|XP_002953441.1| hypothetical protein VOLCADRAFT_94253 [Volvox carteri f.
nagariensis]
gi|300261200|gb|EFJ45414.1| hypothetical protein VOLCADRAFT_94253 [Volvox carteri f.
nagariensis]
Length = 412
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 82/164 (50%), Gaps = 5/164 (3%)
Query: 48 FYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYIT 107
E+C P VI R +V R +T+ + H L H++ N+ +L+P + LER GS
Sbjct: 138 LREVCLSPYCVIDRNEVGRLWTASLTHLDLPHLMSNLASLLPDAAVLERQEGSALFIADV 197
Query: 108 ILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVF 167
LL+T ++ L + A+L + R A+G S + F+L V+ R
Sbjct: 198 ALLSTLSSGLFVGWAVLEKQV-LQRTGTYYAVGAVGLSSLAFALQVVADETRAGGERRCL 256
Query: 168 GLFNIPAKWYPLILLVLFQVLMT--NVSLLGHLCGILSGFAYTY 209
GL +P + + +L + F L++ + S GH+CG+L+G A+ Y
Sbjct: 257 GL-PLPGR-FSWVLSLGFTHLVSAPDTSFAGHMCGVLAGIAHVY 298
>gi|410969603|ref|XP_003991284.1| PREDICTED: rhomboid-related protein 4 [Felis catus]
Length = 316
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 69/151 (45%), Gaps = 3/151 (1%)
Query: 66 RFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLV 125
R S H H+ FNM +++ G LER +GS Y+ + + +++LL+ +
Sbjct: 67 RLLLSPFHHADDWHLYFNMASMLWKGINLERRLGSKWFAYVIVTFSLLTGVVYLLLEFAL 126
Query: 126 AHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLF 185
A F CA+GFSGV+F+L V+ +V G F +P ++ LV
Sbjct: 127 AE--FMNEPGFRRNCAVGFSGVLFALKVLNNHYCPGGFANVLG-FPVPNRFACWAELVAI 183
Query: 186 QVLMTNVSLLGHLCGILSGFAYTYGFFNLLM 216
+ S GHL GIL G YT G +M
Sbjct: 184 HFISPGASFAGHLAGILVGLMYTLGPLKKIM 214
>gi|224107010|ref|XP_002314342.1| predicted protein [Populus trichocarpa]
gi|222863382|gb|EEF00513.1| predicted protein [Populus trichocarpa]
Length = 328
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 89/166 (53%), Gaps = 13/166 (7%)
Query: 47 SFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMF-Y 105
S ++ F P ++ + RF S +H S H+++NM++L+ G +LE +GSV
Sbjct: 56 SIDQVWFNPHLILKYRDLKRFLLSPFYHVSDSHLVYNMMSLLWKGIQLETSVGSVEFASM 115
Query: 106 ITILLATSNAILHLLIALLVA----HIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGA 161
+ LLA S I LL L+ PFY E + GFSGV+F++ V+ S S +
Sbjct: 116 LAALLAMSQGITLLLARSLLLFFDYDKPFY------SEYSAGFSGVLFAMKVVLNSQSES 169
Query: 162 QSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAY 207
+ +V+GL IPA+ L+L Q+ + VS LGHL GIL+G Y
Sbjct: 170 LT-NVYGLV-IPARHAAWAELILIQMFVPGVSFLGHLGGILAGILY 213
>gi|326508430|dbj|BAJ99482.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 269
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 78/150 (52%), Gaps = 16/150 (10%)
Query: 66 RFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMF-YITILLATSNAILHLLIALL 124
RF+ S +H S H +NM +L+ G +LE MGSV +T LL S LL L
Sbjct: 17 RFFLSAFYHLSETHFFYNMTSLLWKGIQLETSMGSVEFASMVTALLGLSQGFTLLLSKGL 76
Query: 125 VA---HIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVF--GLFNIPAKWYPL 179
+ +P+Y D+ A+GFSGV+F + ++ L+ VF G+ IPAK+
Sbjct: 77 LLLGNEVPYY------DQYAVGFSGVLFGMKIV---LNAWSDDYVFLHGMV-IPAKYAAW 126
Query: 180 ILLVLFQVLMTNVSLLGHLCGILSGFAYTY 209
L+L Q + S +GHL GIL+G AY +
Sbjct: 127 AELLLIQAFIPGTSFIGHLSGILAGLAYLW 156
>gi|307213224|gb|EFN88719.1| Rhomboid domain-containing protein 1 [Harpegnathos saltator]
Length = 247
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 88/163 (53%), Gaps = 5/163 (3%)
Query: 50 EICFLPSAVISRFQVYR-FYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITI 108
E+C + + I +++ +R F+ S HGS +H+ +NM++ + GS LE I G++ +
Sbjct: 57 EVC-ISAVKIFKYKNWRSFFFSNFEHGSDMHLYYNMISFILKGSYLEPIYGTMNFVLLLF 115
Query: 109 LLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFG 168
+L+T + +++ + ++ + CAIGFS +F+L VI + ++ G
Sbjct: 116 ILSTGCSAMYVSLGYILMQLT--GDYGYYTTCAIGFSATLFALKVIALCEERDRLHNING 173
Query: 169 LFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGF 211
F + +K + L+L +L+ N S +GHL GIL G Y+Y F
Sbjct: 174 -FQVQSKLAVWVELILIHLLVPNASFVGHLGGILVGCLYSYTF 215
>gi|296205750|ref|XP_002749971.1| PREDICTED: rhomboid domain-containing protein 1 [Callithrix
jacchus]
Length = 316
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 73/171 (42%), Gaps = 3/171 (1%)
Query: 46 DSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFY 105
S Y C + R S H H+ FNM +++ G LE+ +GS
Sbjct: 47 KSLYSSCLSVEKCYQQNDWQRLLLSPFHHADDWHLYFNMASMLWKGINLEKRLGSRWFVC 106
Query: 106 ITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRS 165
+ + +++LL+ VA F + CA+GFSGV+F+L V+ +
Sbjct: 107 VITTFSILTGVVYLLLQFAVAE--FMDEPDFKRSCAVGFSGVLFALKVLNNHYCPGGFVN 164
Query: 166 VFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLM 216
V G F +P ++ + LV + S GHL GIL G YT G +M
Sbjct: 165 VLG-FPVPNRFACWVELVAIHLCSPGTSFAGHLAGILVGLMYTQGPLKKIM 214
>gi|403333494|gb|EJY65848.1| Rab GTPase 2b [Oxytricha trifallax]
Length = 604
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 110/254 (43%), Gaps = 18/254 (7%)
Query: 7 SEAGLSTRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYR 66
S + T+ WE++P F ++I +IYL +F + + P +I Q++R
Sbjct: 13 SSPDMQTQVKNMWENVPTFCRFILISTCSIYLSSFIFAKIPAF-LVTQPLMIIYSLQIWR 71
Query: 67 FYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRM----FYITILLATSNAILHLLIA 122
+T H LL +LF +++ +P + E++ G+V+M F +L+ T + L A
Sbjct: 72 IFTGPFVHVQLLQLLFGLMSYIPTAMQQEKLDGTVKMAFRFFLNAVLIETLFVVACFLFA 131
Query: 123 LLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGL-FNIPAKWYPLIL 181
+ V P + + +IG ++F I IE + S +R + L I +K+YP L
Sbjct: 132 MFVN--PQFMMM-----FSIGLWPILFCDITIECNKSPDLARGLCCLPIQIKSKYYPWAL 184
Query: 182 LVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFI 241
L +F + L G+ G+ + Y + T ES +P F+
Sbjct: 185 LAIFTMFFG--LQLDLFVGLAVGYMHIYKALDKFELSTHKAKLWESKLPFKKYAPEPHFV 242
Query: 242 LCTGGNPSGYIPTY 255
G S +PT+
Sbjct: 243 AADG---SAGLPTF 253
>gi|426221661|ref|XP_004005027.1| PREDICTED: rhomboid-related protein 4 [Ovis aries]
Length = 322
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 71/151 (47%), Gaps = 3/151 (1%)
Query: 66 RFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLV 125
R S + H H+ FNM +++ G LER +GS YI + + +++L + +
Sbjct: 67 RLLLSPIHHADDWHLYFNMASMLWKGIHLERRLGSRWFAYIIVTFSLLTGVVYLFLEFAL 126
Query: 126 AHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLF 185
A F + CAIGFSGV+F+L V+ +V G F + ++ + L+
Sbjct: 127 AE--FLNEPDFKRNCAIGFSGVLFALKVLNNHCCPGGFVNVLG-FPVSNRFACWVELLAI 183
Query: 186 QVLMTNVSLLGHLCGILSGFAYTYGFFNLLM 216
+ S GHL GIL G YT+G +M
Sbjct: 184 HFISPGTSFAGHLAGILVGLMYTHGPLKKIM 214
>gi|345307084|ref|XP_001505522.2| PREDICTED: rhomboid domain-containing protein 1-like
[Ornithorhynchus anatinus]
Length = 318
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 79/169 (46%), Gaps = 11/169 (6%)
Query: 46 DSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFY 105
S + C + R S H H+ FNM++++ G +LE+ +GS +
Sbjct: 47 KSLRKTCISVEECFEQGDWQRLLLSPFHHADDWHLYFNMVSMLWKGMKLEKRLGSGKFAI 106
Query: 106 I----TILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGA 161
I ++L+ IL +A +A P Y++Q CA+GFSGV+F+L V+
Sbjct: 107 IIASFSVLIGIVYMILEFALAEFLAE-PAYKMQ-----CAVGFSGVLFALKVLNNHYHPG 160
Query: 162 QSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYG 210
S ++ G F + ++ + LV +L S GHL GIL G YT G
Sbjct: 161 GSINLMG-FPVSNRYSCWVELVAIHLLSPGTSFAGHLAGILVGLMYTLG 208
>gi|413934803|gb|AFW69354.1| hypothetical protein ZEAMMB73_186009 [Zea mays]
Length = 345
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 83/166 (50%), Gaps = 10/166 (6%)
Query: 47 SFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMF-Y 105
S + F P +I + RF+ S +H S H+ +NM +L+ G LE MGS
Sbjct: 67 SLARVSFNPQLIIEYGDLTRFFLSPFYHLSESHLFYNMTSLLWKGIHLETSMGSAEFASM 126
Query: 106 ITILLATSNAILHLLIALLVAHIPFYRLQNVM--DECAIGFSGVIFSLIVIETSLSGAQS 163
+ +LL S I LL L+ + M D+ A+GFSGV+F++ V+ + S
Sbjct: 127 VAVLLGLSQGITLLLSRGLLLLG-----DDTMYYDQHAVGFSGVLFAMKVVLNAWSD-DF 180
Query: 164 RSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTY 209
+ G+ IPAK+ L+L QV + S LGHL GIL+G Y +
Sbjct: 181 VYLHGMV-IPAKYAAWAELILIQVFIPGTSFLGHLGGILAGLVYLW 225
>gi|351715240|gb|EHB18159.1| Rhomboid domain-containing protein 1 [Heterocephalus glaber]
Length = 315
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 83/197 (42%), Gaps = 7/197 (3%)
Query: 20 ESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLH 79
+IP T A + V ++L L Y C + R S + H H
Sbjct: 25 NNIPPVTLATLAVNIWLFLTPL----KPLYHSCLSVEKCYQQKDWQRLLLSPLHHADDWH 80
Query: 80 VLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDE 139
+ FNM +++ G LER +GS Y+ + +++LL L VA F +
Sbjct: 81 LYFNMASMLWKGINLERRLGSRWFAYVLTTFSLLTGVVYLL--LQVACAEFMDEPDFRRN 138
Query: 140 CAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLC 199
CA+GFSGV+F+L V+ +V G F +P + L+ S GHL
Sbjct: 139 CAVGFSGVLFALKVLSNHYCPGGFVNVLG-FPVPNRLACWAELLAIHFFSPGTSFAGHLA 197
Query: 200 GILSGFAYTYGFFNLLM 216
GIL G YT+G +M
Sbjct: 198 GILVGLMYTHGPLKKIM 214
>gi|197097614|ref|NP_001125444.1| rhomboid-related protein 4 [Pongo abelii]
gi|75042072|sp|Q5RBS4.1|RHBL4_PONAB RecName: Full=Rhomboid-related protein 4; Short=RRP4; AltName:
Full=Rhomboid domain-containing protein 1; AltName:
Full=Rhomboid-like protein 4
gi|55728068|emb|CAH90786.1| hypothetical protein [Pongo abelii]
Length = 318
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 75/180 (41%), Gaps = 3/180 (1%)
Query: 49 YEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITI 108
Y C + R S + H H+ FN +++ G LER +GS Y+
Sbjct: 50 YSSCLSVEKCYQQRDWQRLLLSPLHHADDWHLYFNTASVLWKGINLERRLGSRWFAYVIT 109
Query: 109 LLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFG 168
+ +++LL+ VA F + CA+GFSGV+F+L V+ ++ G
Sbjct: 110 TFSVLTGVVYLLLQFAVAE--FMDEPDFKRSCAVGFSGVLFALKVLNNHYCPGGFVNILG 167
Query: 169 LFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESS 228
F +P ++ + LV + S GH GIL G YT G +M + SS
Sbjct: 168 -FPVPNRFACWVELVAIHLFSPGTSFAGHQAGILVGLMYTQGPLKKIMEACAGLGGFSSS 226
>gi|440910625|gb|ELR60400.1| Rhomboid domain-containing protein 1 [Bos grunniens mutus]
Length = 322
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 72/151 (47%), Gaps = 3/151 (1%)
Query: 66 RFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLV 125
R S + H H+ FNM++++ G LER +GS YI + + +++L + +
Sbjct: 67 RLLLSPLHHADDWHLYFNMVSMLWKGIHLERRLGSRWFAYIIVTFSLLTGVVYLFLEFAL 126
Query: 126 AHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLF 185
A F + CA+GFSGV+F+L V+ +V G F + ++ + L+
Sbjct: 127 AE--FLNEPDFKRNCAVGFSGVLFALKVLNNHCCPGGFVNVLG-FPVSNRFACWVELLAI 183
Query: 186 QVLMTNVSLLGHLCGILSGFAYTYGFFNLLM 216
+ S GHL GIL G YT+G +M
Sbjct: 184 HFISPGTSFAGHLAGILVGLMYTHGPLKKIM 214
>gi|384251613|gb|EIE25090.1| rhomboid-domain-containing protein, partial [Coccomyxa
subellipsoidea C-169]
Length = 260
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 79/163 (48%), Gaps = 10/163 (6%)
Query: 59 ISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLG----SELERIMGSVRMFYITILLATSN 114
+ + +++R T+ V H LLH+LFN+ L LG S G R + T L+
Sbjct: 43 VQKLELWRVLTAQVSHVELLHLLFNLSTLWSLGVIEESNGNGAKGGTRYYLQTSLVLL-- 100
Query: 115 AILHLLIALLVAHI--PFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNI 172
I L+ LL H+ R + +G+S VIF + I S +G S SVFGL NI
Sbjct: 101 -IFSGLVCLLFYHVLGVVLRREQYHTVTTVGYSAVIFGWMTI-LSRTGVASFSVFGLANI 158
Query: 173 PAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLL 215
P P LVL +++ S LGHL GI+ GF G F+ L
Sbjct: 159 PMWLTPFASLVLTSIIIPRASFLGHLSGIVVGFMVASGVFDWL 201
>gi|417414315|gb|JAA53453.1| Putative rhomboid domain-containing protein 1, partial [Desmodus
rotundus]
Length = 287
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 72/151 (47%), Gaps = 3/151 (1%)
Query: 66 RFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLV 125
R S H H+ FNM++++ G +LER +GS Y+ + +++L++ +
Sbjct: 67 RLLLSPFHHADDWHLYFNMVSMLWKGIQLERRLGSRWFAYVITTFSLLTGVVYLVLESAL 126
Query: 126 AHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLF 185
A F CA+GFSGV+F+L V+ +V G F +P ++ LV
Sbjct: 127 AE--FMEEPGFKMNCAVGFSGVLFALKVLSNHYCPGGFVNVLG-FPVPNRFACWAELVAI 183
Query: 186 QVLMTNVSLLGHLCGILSGFAYTYGFFNLLM 216
++ S GHL GIL G YT+G LM
Sbjct: 184 HLISPGTSFAGHLAGILVGLMYTHGPLKKLM 214
>gi|146231840|gb|ABQ12995.1| rhomboid domain containing 1 [Bos taurus]
Length = 322
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 72/151 (47%), Gaps = 3/151 (1%)
Query: 66 RFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLV 125
R S + H H+ FNM++++ G LER +GS YI + + +++L + +
Sbjct: 67 RLLLSPLHHADDWHLYFNMVSMLWKGIHLERRLGSRWFAYIIVTFSLLTGVVYLFLEFAL 126
Query: 126 AHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLF 185
A F + CA+GFSGV+F+L V+ +V G F + ++ + L+
Sbjct: 127 AE--FLNEPDFKRNCAVGFSGVLFALKVLNNHCCPGGFVNVLG-FPVSNRFACWVELLAI 183
Query: 186 QVLMTNVSLLGHLCGILSGFAYTYGFFNLLM 216
+ S GHL GIL G YT+G +M
Sbjct: 184 HFISPGTSFAGHLAGILVGLMYTHGPLKKIM 214
>gi|408387854|gb|EKJ67557.1| hypothetical protein FPSE_12265 [Fusarium pseudograminearum CS3096]
Length = 267
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 105/221 (47%), Gaps = 18/221 (8%)
Query: 1 MRPNIVSEAGLSTRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVIS 60
MRP + + L RA + +P FT +V+ + + L ++ +P IS
Sbjct: 1 MRPRLQNFNAL--RARSYLTRLPLFTRLIVLAIIALSIASLQSVWNLREWGALIPEE-IS 57
Query: 61 RFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMG---SVRMFYITILLATSNAIL 117
YR T + H +++H + N+LAL PL E G S+ +F+ L + A++
Sbjct: 58 ITNAYRLSTFPLIHLNVIHAILNLLALTPLMERFETEHGTLTSLALFFGP--LTSIPAVV 115
Query: 118 HLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLS-GAQSRSVFGLFNIPAKW 176
++LI + +R + +G S +F+L+ +E+ + + V G NIP
Sbjct: 116 YVLIERCI-----FR----ANHGVLGASMWVFTLLAMESIQTYKSNPHFVIGSVNIPTWT 166
Query: 177 YPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMP 217
PLI+ ++ L+ SLLGHLCGI G+ +G+ LL P
Sbjct: 167 TPLIMSLVVAALIPGTSLLGHLCGIAIGYVAGFGYAKLLAP 207
>gi|449278548|gb|EMC86359.1| Rhomboid domain-containing protein 1 [Columba livia]
Length = 220
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 83/172 (48%), Gaps = 9/172 (5%)
Query: 48 FYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYIT 107
+E+C + + R S V H H+ +NM++++ G LE+ + SV YI
Sbjct: 49 LHEVCISVNEGFYKRNWQRLLLSPVHHADDWHLYYNMVSMLWKGIMLEKKLKSVWFAYII 108
Query: 108 ILLATSNAILHLLIALLVAHI---PFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSR 164
+ + ++++++ ++ I P Y + CA+GFSGV+F+L V+ + +
Sbjct: 109 AVFSVLIGVVYMMLEFMLVEILDDPSYEMN-----CAVGFSGVLFALKVLNNHYNPGRVS 163
Query: 165 SVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLM 216
SV GL I +K+ + LV + S GHL GIL G YT G +M
Sbjct: 164 SVLGL-PIASKYACWVELVAIHFISPGTSFAGHLAGILVGLMYTMGPLKKIM 214
>gi|156351056|ref|XP_001622342.1| predicted protein [Nematostella vectensis]
gi|156208856|gb|EDO30242.1| predicted protein [Nematostella vectensis]
Length = 321
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 74/145 (51%), Gaps = 2/145 (1%)
Query: 66 RFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLV 125
R + FH H+ +NM + + G LE +GS Y+ + + +++ + + + +
Sbjct: 69 RLALAPFFHLDDWHLYYNMASFLWKGKSLETKLGSGMFLYLLAVFSVLTSVVLVGLDIFL 128
Query: 126 AHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLF 185
A++ + + CA GFSGVIF+L V+ T + V G+F IP ++ L+L
Sbjct: 129 ANVT--GDSSYLYSCAAGFSGVIFALKVLTTYELPSGVSMVMGMFPIPVRYACWAELILI 186
Query: 186 QVLMTNVSLLGHLCGILSGFAYTYG 210
Q+++ N S GHL GI+ G Y G
Sbjct: 187 QLMVPNASFTGHLAGIIVGLLYVKG 211
>gi|62955205|ref|NP_001017614.1| rhomboid domain-containing protein 1 [Danio rerio]
gi|62204835|gb|AAH92835.1| Zgc:110266 [Danio rerio]
Length = 335
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 89/200 (44%), Gaps = 13/200 (6%)
Query: 20 ESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLH 79
++IP T A + + +YL LF + E C R S H +H
Sbjct: 25 DNIPPVTLATLGL--NVYL--FLFPFKPLLETCLSVREAYWYRDWSRLLLSPFHHVDDMH 80
Query: 80 VLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPF---YRLQNV 136
+ FNM L+ G LE+ +G Y+ + + ++LL+ + H+ Y LQ
Sbjct: 81 LYFNMALLLWKGIRLEKKLGGPWFAYLLSVFSLLTGFVYLLLETGLTHMTEDSSYSLQ-- 138
Query: 137 MDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
CA+GFSGV+F L V+ + ++ GL I ++ + LVL ++ S +G
Sbjct: 139 ---CAVGFSGVLFGLKVVNNHYHPGGATNIMGL-PIANRYACWVELVLIHIMNPGTSFVG 194
Query: 197 HLCGILSGFAYTYGFFNLLM 216
HL GIL G YT G LM
Sbjct: 195 HLSGILVGLLYTTGPLKRLM 214
>gi|290980876|ref|XP_002673157.1| rhomboid domain-containing protein [Naegleria gruberi]
gi|284086739|gb|EFC40413.1| rhomboid domain-containing protein [Naegleria gruberi]
Length = 296
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 15/203 (7%)
Query: 20 ESIPFF-TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLL 78
E I +F S +++ TI L FG + + +I QV+R TS H S++
Sbjct: 6 EQISYFPLSFTIVLINTIVFFILSFGRIPSEFVSYNYDKIIGEKQVWRIVTSTFSHFSII 65
Query: 79 HVLFNMLALVPLGS-EL--ERIMGS------VRMFYITILLATSNAILHLLIALLVAHIP 129
H+LFN+ +L + EL + +GS + F IT LL + + + +
Sbjct: 66 HILFNLGSLWGMRQVELIGQETLGSHSFHSVMEYFKITFLLLVFSTLF--ITVTYFCLVK 123
Query: 130 FYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSR--SVFGLFNIPAKWYPLILLVLFQV 187
F + +N +G+SGV+F ++ + +G S+ S+FGL N+P P + L+L Q+
Sbjct: 124 FMKWENYRQVNIVGYSGVLFGMMTMSILQNGISSKGSSMFGL-NLPNILMPFMSLILTQM 182
Query: 188 LMTNVSLLGHLCGILSGFAYTYG 210
L+ S +GHL GI+ F YG
Sbjct: 183 LIPQASFVGHLGGIVGAFITYYG 205
>gi|348544033|ref|XP_003459486.1| PREDICTED: rhomboid domain-containing protein 1-like [Oreochromis
niloticus]
Length = 323
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 129/292 (44%), Gaps = 19/292 (6%)
Query: 20 ESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLH 79
+IP T AV+ + +YL LF ++ C R S + H H
Sbjct: 25 NNIPPITLAVLAL--NVYLY--LFPAAPLFQACVSVQQAYWLKDWRRLLLSPLHHADDWH 80
Query: 80 VLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDE 139
+ FNM++ + G LE+ +G Y+ + + +++L++ L+ + + Q+
Sbjct: 81 LYFNMVSFLWKGRRLEQRLGGPWFLYLLSVFSLLTGLVYLVLEALLTEL--MQDQSYSMA 138
Query: 140 CAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLC 199
CA+GFSGV+F+L V+ V GL + +++ + LVL + S +GHL
Sbjct: 139 CAVGFSGVLFALKVLNNHYYPGSVTYVMGL-PVSSRYASWVELVLIHITSPGTSFVGHLS 197
Query: 200 GILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFILCTGGNPSGYIPT---YS 256
GIL G YT G +M + + + S+ S QP + G PSGY T +S
Sbjct: 198 GILVGLLYTTGPLKKIMKKCAGF--VTSNGYNS----QPGAYYRSSG-PSGYTGTGRGFS 250
Query: 257 GQNTSSSGLFSGNIWSNLSSWMPQRETSSQPTQDSRFPGRGRTLSSSQSPVH 308
G + G ++ + ++ + + + E + ++S RG+T P +
Sbjct: 251 GNYQYAPG-YTADYTASYTGGLTEEEQLEEAIRNS-LNDRGQTRQRGAPPAY 300
>gi|197304727|ref|NP_001127873.1| rhomboid domain containing 1 [Nasonia vitripennis]
Length = 246
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 80/166 (48%), Gaps = 11/166 (6%)
Query: 50 EICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITIL 109
++C ++ F S HGS +H+ +NM++ + GS LE + G+ + L
Sbjct: 57 DVCISTLKILKHKDWRSFVVSNFEHGSDMHLYYNMVSFLLKGSYLEPMYGTANFALLIGL 116
Query: 110 LATSNAILHLLIALLVAHI----PFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRS 165
L+ + +++ + + I +Y CAIGFS V+F+L VI +
Sbjct: 117 LSLGCSSMYVFLGYALTQITTDYAYY------TSCAIGFSAVLFALKVIVVCEEHDRPTD 170
Query: 166 VFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGF 211
V G F +P+K+ LVL +L+ N S +GHL GIL G Y Y F
Sbjct: 171 VGG-FRVPSKFAVWAELVLIHLLVPNSSFIGHLGGILVGCLYCYTF 215
>gi|406861146|gb|EKD14201.1| rhomboid protein 2 [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 266
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 102/233 (43%), Gaps = 16/233 (6%)
Query: 12 STRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSI 71
+TR + IP FT V+I +++ + +D +P I +YR T
Sbjct: 10 ATRLRSYIFRIPLFTRCVIIAITGLWIASIQSVWDVQQWGALIPGE-IGLSTMYRTNTFP 68
Query: 72 VFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITI-LLATSNAILHLLIALLVAHIPF 130
+ H H N L+L PL E G++ + + L+T A+L+ I + H
Sbjct: 69 LVHVGFFHAFLNTLSLTPLLERFEAEYGTLTTLALFMGPLSTIPALLYTFIERGIFH--- 125
Query: 131 YRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVF--GLFNIPAKWYPLILLVLFQVL 188
M+ +G S +F+LI +E ++ +S F G IP P+++++ VL
Sbjct: 126 ------MNTTILGASIWVFTLIAME-AVKTYKSNPYFMLGTTQIPTWITPIVMVLFVSVL 178
Query: 189 MTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFI 241
+ N S LGHLCG+ G+ + G+ L P IE L+ R P ++
Sbjct: 179 IPNTSFLGHLCGLAFGYGWALGYLKFLAPPERVLRWIEGK--LNLLGRLPHYV 229
>gi|397573927|gb|EJK48937.1| hypothetical protein THAOC_32226 [Thalassiosira oceanica]
Length = 713
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 97/225 (43%), Gaps = 47/225 (20%)
Query: 58 VISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELE-RIMGSVRMFYITILLATSNAI 116
++ + +R T H LLHV FNM+++ LG E+E ++ S+ L I
Sbjct: 281 IVHEHEWWRGITGATAHFDLLHVGFNMVSMDNLGREIEGTLLNSIEFLMWNFALVVYTTI 340
Query: 117 LHLLIALLVAHIPFYRLQNVMDEC--------------------AIGFSGVIFSLIVIET 156
+ +IA++ A I + LQ +D C ++G+S V+F+ +V+ T
Sbjct: 341 I--MIAMVYARIRY--LQRKIDACGNAEIRATYEMKQDKLRSTSSVGYSAVLFAWMVVST 396
Query: 157 SLSGAQSRSV-------FGLFNIPA------KWYPLILLVLFQVLMTNVSLLGHLCGILS 203
+ + F + +P W P++ L+ Q++ VS +GHL GI+
Sbjct: 397 MERKMPTCPIPFAKDVCFATYEVPGLSWLRFNWSPIVSLIFCQIIFPRVSFIGHLAGIIC 456
Query: 204 GFAYTYGFF--------NLLMPGTSF-YSAIESSSLLSTCIRQPK 239
GF +G N+L+ G + Y A+E I+Q +
Sbjct: 457 GFLLHWGLLPPLELSSVNVLIGGRNKQYVAVEGDDESQQSIKQRR 501
>gi|332024419|gb|EGI64617.1| Rhomboid domain-containing protein 1 [Acromyrmex echinatior]
Length = 246
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 83/162 (51%), Gaps = 3/162 (1%)
Query: 50 EICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITIL 109
++C +I F+ S HGS +H+ +NML+ + GS LE I G++ + +
Sbjct: 56 DVCISAIKIIKYKNWRSFFLSNFEHGSDMHLYYNMLSFILKGSYLEPIYGTMNFVLLLGV 115
Query: 110 LATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGL 169
L+ + +++ + ++ + CAIGFS +F+L VI + +++ GL
Sbjct: 116 LSIGCSAMYVFLGYILMQLT--GDYGYFTACAIGFSATLFALKVIALCEERDKLQNINGL 173
Query: 170 FNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGF 211
+P+K + L+L +L+ N S +GHL GIL G Y+Y F
Sbjct: 174 I-VPSKIAVWLELILIHLLVPNSSFIGHLGGILVGCLYSYSF 214
>gi|46127153|ref|XP_388130.1| hypothetical protein FG07954.1 [Gibberella zeae PH-1]
gi|83288432|sp|Q4I4A4.1|RBD2_GIBZE RecName: Full=Rhomboid protein 2
Length = 267
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 12/218 (5%)
Query: 1 MRPNIVSEAGLSTRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVIS 60
MRP + + L RA + +P FT +V+ + + L ++ +P IS
Sbjct: 1 MRPRLQNFNAL--RARSYLTRLPLFTRLIVLAIIALSIASLQSVWNLREWGALIPEE-IS 57
Query: 61 RFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLL 120
YR T + H +++H + N+LAL PL E G++ + TS
Sbjct: 58 ITNAYRLSTFPLIHLNVIHAILNLLALTPLMERFETEHGTLTSLALFFGPLTSIPA---- 113
Query: 121 IALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLS-GAQSRSVFGLFNIPAKWYPL 179
VA++ R + +G S +F+L+ +E+ + + V G NIP PL
Sbjct: 114 ----VAYVLIERCIFRANHGVLGASMWVFTLLAMESIQTYKSNPHFVIGSVNIPTWTTPL 169
Query: 180 ILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMP 217
I+ ++ L+ SLLGHLCGI G+ +G+ LL P
Sbjct: 170 IMSLVVAALIPGTSLLGHLCGIAIGYVAGFGYAKLLAP 207
>gi|16041108|dbj|BAB69721.1| hypothetical protein [Macaca fascicularis]
Length = 261
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 75/172 (43%), Gaps = 3/172 (1%)
Query: 49 YEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITI 108
Y C + R S + H + H+ FNM +++ G LER +GS +
Sbjct: 50 YSSCLSVEKCCQQKDWQRLLLSPLHHANDWHLYFNMASMLWKGIHLERRLGSRWFALVIT 109
Query: 109 LLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFG 168
+ +++LL+ VA F + CA+GFSGV+F+L V+ ++ G
Sbjct: 110 TFSILTGVVYLLLQFAVAE--FMDEPDFKRSCAVGFSGVLFALKVLNNHYCPGGFVNILG 167
Query: 169 LFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTS 220
F +P ++ + LV + S GHL GIL G YT G +M +
Sbjct: 168 -FPVPNRFACWVELVAIHLFSPGTSFAGHLAGILVGLMYTQGPLKKMMEACA 218
>gi|320039359|gb|EFW21293.1| rhomboid protein 2 [Coccidioides posadasii str. Silveira]
Length = 268
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 95/220 (43%), Gaps = 16/220 (7%)
Query: 13 TRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIV 72
TR + +P FT V+I T+ L+ L + PS V S ++R T +
Sbjct: 13 TRLRSYILRLPLFTRTVLIAIVTLCLLDLQPAWSVARWGALKPSEV-SLMSMHRLNTYPI 71
Query: 73 FHGSLLHVLFNMLALVPLGSELERIMG---SVRMFYITILLATSNAILHLLIALLVAHIP 129
H +H N+LAL PL E G S+ MF+ L+T L++L+ +
Sbjct: 72 VHQGFIHAFLNILALTPLLERFEAEYGTLTSLAMFFGP--LSTFPGGLYILVEKCI---- 125
Query: 130 FYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSV-FGLFNIPAKWYPLILLVLFQVL 188
+R D +G S +F L+ E + A + G + IP PLI + L
Sbjct: 126 -FR----QDTAILGSSIWVFLLLASEAMKTYASNPHFSLGTYKIPTWATPLIGTIFVSAL 180
Query: 189 MTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESS 228
+ N S +GHLCGI G+A G+ +L P +ES
Sbjct: 181 IPNTSFVGHLCGIAVGYALGLGYLKILFPPEKILRWVESK 220
>gi|307103357|gb|EFN51618.1| hypothetical protein CHLNCDRAFT_55006 [Chlorella variabilis]
Length = 326
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 87/181 (48%), Gaps = 29/181 (16%)
Query: 47 SFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVP-------------LGSE 93
S + C LP +++S Q R S H LH+ +NM +L+ GS+
Sbjct: 88 SIRQGCLLPRSILSG-QWGRLLWSPFLHADNLHLYYNMTSLLWKASQQLGAGRCCFWGSQ 146
Query: 94 LERIMGSVRMFYITILLA-TSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLI 152
LE +GS + LA SNA+ L ALL H P ++M CA+GFSGV+F +
Sbjct: 147 LEPRLGSAAYGALVAELALVSNALYMGLAALLARHAPALGW-SLMHACAVGFSGVLFGMK 205
Query: 153 VIETSLSGAQSRSVFGLFNIPAK--------WYPLILLVLFQVLMTNVSLLGHLCGILSG 204
V+ S S ++G+ +P K W L+++ Q+L+ S GHLCGIL+G
Sbjct: 206 VVLNHNSPGWSE-IYGI-ALPTKASASMYACWAELLVM---QLLVPEASFWGHLCGILAG 260
Query: 205 F 205
Sbjct: 261 L 261
>gi|357131656|ref|XP_003567452.1| PREDICTED: uncharacterized protein At3g17611-like [Brachypodium
distachyon]
Length = 345
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 81/163 (49%), Gaps = 10/163 (6%)
Query: 50 EICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMF-YITI 108
+ F P +I + RF+ S +H S H +NM +L+ G +LE +GSV +
Sbjct: 74 RVAFNPYLIIQYGDLTRFFLSAFYHLSETHFFYNMTSLLWKGIQLETSVGSVEFASMVAA 133
Query: 109 LLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVF- 167
LLA S I LL L+ F D+ A+GFSGV+F + ++ L+ VF
Sbjct: 134 LLALSQGITLLLSKGLLL---FGNETAYYDQYAVGFSGVLFGMKIV---LNAWSDDYVFL 187
Query: 168 -GLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTY 209
G+ IPAK+ L+L Q + S +GHL GIL+G Y +
Sbjct: 188 HGMV-IPAKYAAWAELLLIQAFIPGTSFIGHLGGILAGLTYLW 229
>gi|119194665|ref|XP_001247936.1| hypothetical protein CIMG_01707 [Coccidioides immitis RS]
gi|392862824|gb|EAS36506.2| rhomboid protein 2 [Coccidioides immitis RS]
Length = 268
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 95/220 (43%), Gaps = 16/220 (7%)
Query: 13 TRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIV 72
TR + +P FT V+I T+ L+ L + PS V S ++R T +
Sbjct: 13 TRLRSYILRLPLFTRTVLIAIVTLCLLDLQPAWSVARWGALKPSEV-SLMSMHRLNTYPI 71
Query: 73 FHGSLLHVLFNMLALVPLGSELERIMG---SVRMFYITILLATSNAILHLLIALLVAHIP 129
H +H N+LAL PL E G S+ MF+ L+T L++L+ +
Sbjct: 72 VHQGFIHAFLNILALTPLLERFEAEYGTLTSLAMFFGP--LSTFPGGLYILVEKCI---- 125
Query: 130 FYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSV-FGLFNIPAKWYPLILLVLFQVL 188
+R D +G S +F L+ E + A + G + IP PLI + L
Sbjct: 126 -FR----QDTAILGSSIWVFLLLASEAMKTYASNPHFSLGTYKIPTWATPLIGTIFVSAL 180
Query: 189 MTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESS 228
+ N S +GHLCGI G+A G+ +L P +ES
Sbjct: 181 IPNTSFVGHLCGIAVGYALGLGYLKILFPPEKILRWVESK 220
>gi|348577789|ref|XP_003474666.1| PREDICTED: rhomboid domain-containing protein 1-like [Cavia
porcellus]
Length = 309
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 91/212 (42%), Gaps = 14/212 (6%)
Query: 66 RFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLV 125
R S + H H+ FNM++++ G LER +GS Y+ +++LL L V
Sbjct: 67 RLLLSPLHHADDWHLYFNMVSMLWKGINLERRLGSRWFAYVLATFVLFTGVVYLL--LQV 124
Query: 126 AHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLF 185
A F + CA+GFSGV+F+L V+ ++ G +P K L+
Sbjct: 125 ACAEFMDEPDFRRNCAVGFSGVLFALKVLNNHYCPGGFVNILGC-PVPNKLACWAELLAI 183
Query: 186 QVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFILCTG 245
L S GHL GIL G YT G +M + + S++ S RQP +
Sbjct: 184 HFLSPGTSFAGHLAGILVGLMYTRGPLKKIMETCA--DTVCSTTGYS---RQPYYF---- 234
Query: 246 GNPSGYIPTYSGQNTSSSGLFSGNIWSNLSSW 277
N SGY Y + S ++G N ++
Sbjct: 235 -NSSGY-SGYQDHHLYGSPRYNGEALRNYDAY 264
>gi|118151086|ref|NP_001071463.1| rhomboid domain-containing protein 1 [Bos taurus]
gi|115304921|gb|AAI23778.1| Rhomboid domain containing 1 [Bos taurus]
Length = 267
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 80/176 (45%), Gaps = 16/176 (9%)
Query: 66 RFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLV 125
R S + H H+ FNM++++ G LER +GS YI + + +++L + +
Sbjct: 67 RLLLSPLHHADDWHLYFNMVSMLWKGIHLERRLGSRWFAYIIVTFSLLTGVVYLFLEFAL 126
Query: 126 AHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLF 185
A F + CA+GFSGV+F+L V+ +V G F + ++ + L+
Sbjct: 127 AE--FLNEPDFKRNCAVGFSGVLFALKVLNNHCCPGGFVNVLG-FPVSNRFACWVELLAI 183
Query: 186 QVLMTNVSLLGHLCGILSGFAYTYGFFNLLM-------------PGTSFYSAIESS 228
+ S GHL GIL G YT+G +M PG +Y ++++
Sbjct: 184 HFISPGTSFAGHLAGILVGLMYTHGPLKKIMELCTGIFPSNIDYPGQQYYFIVQAT 239
>gi|429239375|ref|NP_588499.2| rhomboid family protease [Schizosaccharomyces pombe 972h-]
gi|395398460|sp|O74926.2|RBD2_SCHPO RecName: Full=Rhomboid protein 2
gi|347834486|emb|CAA21293.2| rhomboid family protease [Schizosaccharomyces pombe]
Length = 251
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 78/151 (51%), Gaps = 11/151 (7%)
Query: 57 AVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATS-NA 115
++ + Q+Y T + H S+LH++FN ++L+P S+ E+ G++ +T++ T
Sbjct: 49 GLLQKRQLYEIITYVTLHLSMLHIVFNFVSLLPAMSQFEKKQGTLACILVTVIPYTLFPG 108
Query: 116 ILHLLIALLVAHIPFYRLQNVMDECAI-GFSGVIFSLIVIETSLSGAQSRSVFGLFNIPA 174
I+HL++ Y D +I G SG F+ I S + S F LF+IPA
Sbjct: 109 IMHLIV---------YHFFLRKDYVSIAGLSGWAFAFISASCVHSPQRLISFFNLFSIPA 159
Query: 175 KWYPLILLVLFQVLMTNVSLLGHLCGILSGF 205
+P+I L++ +L+ S +GH G + G+
Sbjct: 160 YCFPIIYLIMTTILVPKASFIGHASGAVMGY 190
>gi|344292440|ref|XP_003417935.1| PREDICTED: rhomboid domain-containing protein 1-like [Loxodonta
africana]
Length = 315
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 69/151 (45%), Gaps = 3/151 (1%)
Query: 66 RFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLV 125
R S H H+ FNM +++ G LER +GS YI + +++LL+ +
Sbjct: 67 RLLLSPFHHADDWHLYFNMASMLWKGINLERRLGSRWFAYIIATFSLLTGVVYLLLESSL 126
Query: 126 AHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLF 185
A F + CA+GFSGV+F+L V+ ++ GL +P ++ + LV
Sbjct: 127 A--AFLDEPDFRRTCAVGFSGVLFALKVLNNHYCPGCFVNILGL-PVPNRYACWVELVAI 183
Query: 186 QVLMTNVSLLGHLCGILSGFAYTYGFFNLLM 216
S GHL GIL G YT G +M
Sbjct: 184 HFFTPGTSFAGHLAGILVGLMYTQGPLKKIM 214
>gi|322802448|gb|EFZ22798.1| hypothetical protein SINV_10941 [Solenopsis invicta]
Length = 247
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 90/166 (54%), Gaps = 11/166 (6%)
Query: 50 EICFLPSAVISRFQVYR-FYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITI 108
E+C + + I +++ +R F+ S HGS +H+ +NM++ + GS LE + G+ +
Sbjct: 57 EVC-ISAVKIIKYKDWRSFFLSNFEHGSDMHLYYNMISFILKGSYLEPLYGTTNFVLLLA 115
Query: 109 LLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFG 168
+L+ +++++ + ++ + CAIGFS +F+L V+ + ++ G
Sbjct: 116 ILSFGCSVMYVSLGYILMQLT--GDYGYFTACAIGFSATLFALKVVALCEERDKLHNISG 173
Query: 169 LFNIPAK---WYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGF 211
F +P+K W+ LIL+ +L+ N S +GHL GIL G Y+Y F
Sbjct: 174 -FIVPSKLAVWFELILI---HLLVPNSSFIGHLGGILVGCLYSYTF 215
>gi|320168465|gb|EFW45364.1| hypothetical protein CAOG_03370 [Capsaspora owczarzaki ATCC 30864]
Length = 451
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 84/174 (48%), Gaps = 7/174 (4%)
Query: 47 SFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYI 106
F ++ F +AV R Q+ R T+ FH SL+H+L NM A V S E G++
Sbjct: 106 DFEQVTFSYAAVYERQQLSRIITAPFFHASLVHLLMNMSA-VWTCSFFEEERGTLEYMRA 164
Query: 107 TILLATSNAILHL-LIALLVAHIPFYRLQNVMDE----CAIGFSGVIFSLIVIETSLSGA 161
T LL +A +HL L LV H + L D ++G+SGV F L + L+
Sbjct: 165 TALLIGLSAFVHLALTHCLVLHANWRGLVERRDSYRTCLSVGYSGVAFGLATL-LGLAHP 223
Query: 162 QSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLL 215
F N PA PL L+L Q L+ SLL H+ GI++G +G +++
Sbjct: 224 MYPVPFLFANFPAWSAPLFNLILTQFLVRRASLLAHVSGIIAGVFLHFGGLDVV 277
>gi|213512430|ref|NP_001133781.1| Rhomboid domain-containing protein 1 [Salmo salar]
gi|209155312|gb|ACI33888.1| Rhomboid domain-containing protein 1 [Salmo salar]
gi|209734730|gb|ACI68234.1| Rhomboid domain-containing protein 1 [Salmo salar]
Length = 313
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 20 ESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLH 79
E+IP T AV+ + ++L+ L + C R R S + H H
Sbjct: 26 ENIPPVTLAVLGLNVYLFLVPNL----PLLQACISVQQAYWRGDWRRLVLSPLHHLDDWH 81
Query: 80 VLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHI---PFYRLQNV 136
+ FNM + + G +LE +GS ++ + + +++LL+ ++++ I P Y +Q
Sbjct: 82 LYFNMASFLWKGVKLEPRLGSSFYAWLLAVFSLLTGVIYLLLEMVLSEITQDPSYSMQ-- 139
Query: 137 MDECAIGFSGVIFSLIVIETSLSGAQSRSVFGL--FNIPAKWYPLILLVLFQVLMTNVSL 194
CA+GFSGV+F+L V+ V G+ N A W + LVL + S
Sbjct: 140 ---CAVGFSGVLFALKVLSNHYHPGGVSYVMGVPVANRYASW---VELVLIHLTSPGTSF 193
Query: 195 LGHLCGILSGFAYTYGFFNLLM 216
+GHL GIL G YT G ++M
Sbjct: 194 VGHLAGILVGLLYTAGPLKIIM 215
>gi|410910522|ref|XP_003968739.1| PREDICTED: rhomboid-related protein 4-like [Takifugu rubripes]
Length = 321
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 77/152 (50%), Gaps = 3/152 (1%)
Query: 65 YRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALL 124
+R S + H H+ FNM++ + G LER +G Y+ + + +++L + L
Sbjct: 66 HRLLLSPLHHADDFHLYFNMVSFLWKGVRLERRLGGAWFLYLLSVFSLLTGVVYLALETL 125
Query: 125 VAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVL 184
+A + + Q+ +CA+GFSGV+F+L VI + V GL I ++ + LVL
Sbjct: 126 LAEL--TQDQSYNMQCAVGFSGVLFALKVINNHYYPGGTTYVMGL-PISNRYASWVELVL 182
Query: 185 FQVLMTNVSLLGHLCGILSGFAYTYGFFNLLM 216
+ SL+GHL GI+ G YT G +M
Sbjct: 183 IHITAPGTSLIGHLSGIVVGLLYTVGPLKTIM 214
>gi|355716387|gb|AES05595.1| rhomboid domain containing 1 [Mustela putorius furo]
Length = 294
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 74/174 (42%), Gaps = 8/174 (4%)
Query: 49 YEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITI 108
+E C + R S + H H+ FNM +++ G LER +GS Y+ +
Sbjct: 50 FESCLSVEKCYQQKDWQRLLLSPLHHADDWHLYFNMASMLWKGIHLERRLGSRWFAYVIV 109
Query: 109 LLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFG 168
+ +L+L + +A F + CA+GFSGV+F+L V+ ++ G
Sbjct: 110 TFSLLTGVLYLFLEFALAE--FLDEPDFRRNCAVGFSGVLFALKVLNNHYCPGGFANILG 167
Query: 169 ------LFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLM 216
L +P + L+ L S GHL GIL G YT+G +M
Sbjct: 168 FPVPNRLACVPNRLACWAELLAIHFLSPGTSFAGHLAGILVGLMYTHGPLKKIM 221
>gi|296490188|tpg|DAA32301.1| TPA: rhomboid domain-containing protein 1 [Bos taurus]
Length = 268
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 72/151 (47%), Gaps = 3/151 (1%)
Query: 66 RFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLV 125
R S + H H+ FNM++++ G LER +GS YI + + +++L + +
Sbjct: 67 RLLLSPLHHADDWHLYFNMVSMLWKGIHLERRLGSRWFAYIIVTFSLLTGVVYLFLEFAL 126
Query: 126 AHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLF 185
A F + CA+GFSGV+F+L V+ +V G F + ++ + L+
Sbjct: 127 AE--FLNEPDFKRNCAVGFSGVLFALKVLNNHCCPGGFVNVLG-FPVSNRFACWVELLAI 183
Query: 186 QVLMTNVSLLGHLCGILSGFAYTYGFFNLLM 216
+ S GHL GIL G YT+G +M
Sbjct: 184 HFISPGTSFAGHLAGILVGLMYTHGPLKKIM 214
>gi|405975233|gb|EKC39814.1| Serine/threonine-protein kinase RIO2 [Crassostrea gigas]
Length = 670
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 6/89 (6%)
Query: 134 QNVMDE------CAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQV 187
+ +MD+ CA+GFSGVIF+L V+ T S + ++ + G +P+K+ LV Q+
Sbjct: 492 KKIMDDGSYRLTCAVGFSGVIFALKVLVTHYSPSGTQYLMGFIPVPSKYIFWAELVFIQM 551
Query: 188 LMTNVSLLGHLCGILSGFAYTYGFFNLLM 216
+ NVS +GHL GIL G YT G M
Sbjct: 552 ITPNVSFVGHLAGILVGLLYTKGPLKAFM 580
>gi|388519203|gb|AFK47663.1| unknown [Lotus japonicus]
Length = 119
Score = 65.1 bits (157), Expect = 6e-08, Method: Composition-based stats.
Identities = 32/54 (59%), Positives = 38/54 (70%), Gaps = 4/54 (7%)
Query: 278 MPQRETSSQPTQDSRFPGRGRTLSSSQ----SPVHVDSNLQARLLDNSSPENRS 327
MPQRE S+Q +DSRFPG GRTL SSQ S + +SNLQAR L++SSP S
Sbjct: 1 MPQREVSAQSAEDSRFPGAGRTLGSSQGQMASGIQSNSNLQARPLEDSSPNQPS 54
>gi|320587469|gb|EFW99949.1| GPI transamidase component [Grosmannia clavigera kw1407]
Length = 921
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 102/227 (44%), Gaps = 25/227 (11%)
Query: 22 IPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVL 81
+P FT A+V + +YL L +D +P +YR T H H+L
Sbjct: 42 LPLFTRAIVALIVVVYLAGLQTVWDVRSWGALIPDKT-GITTLYRTNTFPFVHLGFFHML 100
Query: 82 FNMLALVPLGSELERIMG------SVRMFYITILLATSNAILHLLIALLVAHIPFYRLQN 135
FN++AL PL LER G SV +F+ L+T A+L+++I ++
Sbjct: 101 FNVVALTPL---LERFEGEHGTLTSVALFFGP--LSTLPAVLYVIIERVLH--------- 146
Query: 136 VMDECAIGFSGVIFSLIVIET-SLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSL 194
++ +G S +F L+ +E + G ++P PL L+ + L+ + SL
Sbjct: 147 -LNTTIMGSSIWVFLLLGVEAVRMCRTHPSFAVGTVHVPTWTTPLALVFVTSALVPHASL 205
Query: 195 LGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFI 241
LGHLCG+ G+ G+ L P S IE L+ R P+++
Sbjct: 206 LGHLCGLAVGYLCGLGYLKFLAPPESVLRWIEGR--LNLLGRLPRYV 250
>gi|156042502|ref|XP_001587808.1| hypothetical protein SS1G_11048 [Sclerotinia sclerotiorum 1980]
gi|154695435|gb|EDN95173.1| hypothetical protein SS1G_11048 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 269
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 102/232 (43%), Gaps = 14/232 (6%)
Query: 12 STRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSI 71
+TR + +P FT +V + ++L+ L +D P+ I +YR T
Sbjct: 10 ATRLRSYILRLPLFTRCIVAIIFILWLVSLQSAWDLQKWGGLYPNE-IGLQTMYRTNTFP 68
Query: 72 VFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITI-LLATSNAILHLLIALLVAHIPF 130
+ H +H++ N++AL PL E G++ + + L+T A+++ + + H
Sbjct: 69 LIHMGFIHMIMNIIALTPLLERFEAEYGTLTTLALFMGPLSTIPALIYTFVERGIFH--- 125
Query: 131 YRLQNVMDECAIGFSGVIFSLIVIET-SLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLM 189
M+ +G S +F+L+ +E V G IP P+IL + L+
Sbjct: 126 ------MNTGVMGASIWVFTLLAMEAIKTYKTNPNFVLGTVQIPTWTTPIILTLFISFLV 179
Query: 190 TNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFI 241
+ S LGHLCG++ G+ + G+ L P IE ++ R P ++
Sbjct: 180 PHTSFLGHLCGLVFGYGWGLGYLKFLAPPEKILRWIEGK--MNLLGRLPHYV 229
>gi|425768476|gb|EKV06997.1| Rhomboid protein 2 [Penicillium digitatum PHI26]
gi|425775813|gb|EKV14064.1| Rhomboid protein 2 [Penicillium digitatum Pd1]
Length = 1222
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 130/323 (40%), Gaps = 42/323 (13%)
Query: 22 IPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVL 81
+P FT V++V +L+ + +P I+ +YR T + H H
Sbjct: 24 LPLFTRLVLLVILAFWLLEFQTIWSVVQWGALIPEE-INLGTMYRLNTYPIIHTGFFHAF 82
Query: 82 FNMLALVPLGSELERIMGSVRMFYITI-LLATSNAILHLLIALLVAHIPFYRLQNVMDEC 140
FN +A+ PL E G++ + I L+T A L++L+ V H +
Sbjct: 83 FNAVAVTPLLERFEAEHGTLTAIALFIGPLSTVPAGLYILVEKFVLH---------RNTS 133
Query: 141 AIGFSGVIFSLIVIETSLSGAQSRSVF--GLFNIPAKWYPLILLVLFQVLMTNVSLLGHL 198
+G S F L+ E ++ +S F G + IP PL V+ +L++NVS LGHL
Sbjct: 134 VVGASIWAFLLLGSE-AIKTYKSHPNFSLGPYKIPTWTSPLFGCVVVSILISNVSFLGHL 192
Query: 199 CGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFILCTGGNPS--GYIPTY- 255
C IL G+ G+ + +P IE L+ R P ++ G +PT
Sbjct: 193 CAILVGYLLGLGYLKVFVPPEKVLRWIEGK--LNLLGRLPHYVSVDQKTYGRYGVLPTTN 250
Query: 256 -SGQNTSSSGLFSGNIWSNLSSWMPQRETSSQPTQDSRFPGRGRTLSSSQSPVHVDSNLQ 314
+G N + + + S P R+ P+ D + + + PV
Sbjct: 251 PAGANGNQTPMTS-----------PSRQ--GNPSPDGHYSMALKCEQAGMPPV------- 290
Query: 315 ARLLDNSSPENRSHMIVTETGDR 337
L D+S+P N+ + G+
Sbjct: 291 --LPDSSTPTNKMQAAIRNLGNN 311
>gi|255083188|ref|XP_002504580.1| predicted protein [Micromonas sp. RCC299]
gi|226519848|gb|ACO65838.1| predicted protein [Micromonas sp. RCC299]
Length = 381
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 88/166 (53%), Gaps = 12/166 (7%)
Query: 47 SFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYI 106
S E+C A++ Q YR TS + +G +H+++N+ + + G+ LE MGS + +
Sbjct: 91 SAAEMCLSAGAIVEAGQFYRILTSFLSYGDEMHLIYNLSSFLWKGANLEIKMGSEKFTKL 150
Query: 107 TI-LLATSNAILHLLIALLVAHIPF---YRLQNVMDECAIGFSGVIFSLIVIETSLSGAQ 162
I LL +NA+ ++ + A++ YR + C +G +GV F+L I + A
Sbjct: 151 LIGLLVCTNAMAVGVMYAMAAYLGMPEAYR-----NSCVMGNNGVNFALKTILFA-DEAS 204
Query: 163 SRSVFGLFNIPAKWYPLILLVLFQVLMTNVS-LLGHLCGILSGFAY 207
+ S+ G+ +P+KW L L ++ + + L+ H+CGIL G AY
Sbjct: 205 NTSMLGI-TMPSKWASWAELGLMYLMYPHTAGLVVHVCGILVGLAY 249
>gi|50547373|ref|XP_501156.1| YALI0B20878p [Yarrowia lipolytica]
gi|74635233|sp|Q6CDV6.1|RBD2_YARLI RecName: Full=Rhomboid protein 2
gi|49647022|emb|CAG83409.1| YALI0B20878p [Yarrowia lipolytica CLIB122]
Length = 297
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 122/265 (46%), Gaps = 31/265 (11%)
Query: 54 LPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATS 113
L S ++ F++ R + H + H+L N++AL P+ S+ ER+ G+VR + +LA
Sbjct: 47 LRSTALTNFELNRISFYPLVHATWFHLLLNLVALQPIVSQFERVNGTVRTGIVLNILAVV 106
Query: 114 NAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLI---VIETSLSGAQSRSVFGLF 170
AI L++ I F+ DE +G S IFS + I S ++ L
Sbjct: 107 TAIPWCLLS-----IGFFP-----DEAVLGSSAWIFSFMGYWAIRESSKQPTTQLAPNLV 156
Query: 171 NIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLM-PGTSFYSAIESSS 229
+P P+I LV+ +++ + S +GHL G+++G+ G+ ++L+ P + IE+
Sbjct: 157 -VPTWLLPIIYLVVIAIVIPSSSFIGHLLGLIAGWMMALGYLDVLIEPSSKVVLWIENK- 214
Query: 230 LLSTCIRQPKFILCTGGNPSGYIPTYSGQNTSSS-----------GLFSGNIWSNLSSWM 278
+S I + T G + T + ++ G + + ++L +
Sbjct: 215 -ISRVIDLIPSSIVTFYREEGALDTRAAARADTNRSLSVSGGNFLGFQANSSQADLEAGT 273
Query: 279 PQRETSS-QPTQDSRFPGRGRTLSS 302
R SS PT + FPG G+TL +
Sbjct: 274 RSRGNSSVDPT--TSFPGTGQTLGT 296
>gi|400593503|gb|EJP61446.1| rhomboid family protein [Beauveria bassiana ARSEF 2860]
Length = 264
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 103/213 (48%), Gaps = 17/213 (7%)
Query: 10 GLST-RANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFY 68
G ST +A + +P FT A++++ L+ L +D +PS IS F +R
Sbjct: 6 GFSTVKARSYIYRLPLFTRAIILIIFVFSLLSLPGIWDVQAWGSLIPSE-ISLFAAHRIN 64
Query: 69 TSIVFHGSLLHVLFNMLALVPLGSELERIMG---SVRMFYITILLATSNAILHLLIALLV 125
T + H ++LH + N++AL PL E G S+ +F+ L T A+L+L+I +
Sbjct: 65 TFPLIHLNILHAILNIVALTPLMERFENEYGTLTSLALFFGP--LTTVPALLYLVIESGI 122
Query: 126 AHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLS-GAQSRSVFGLFNIPAKWYPLILLVL 184
RL N + +G S +F L+ +E + + V G +IP PL+L +
Sbjct: 123 -----LRLNNAI----MGASIWVFLLLGMEAIRTYRSNPHLVIGTHHIPTWTIPLLLTFV 173
Query: 185 FQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMP 217
L+ N SLLGHLCG+ G+ G+ + P
Sbjct: 174 IAALVPNSSLLGHLCGLAVGYIAGLGYVKYIAP 206
>gi|307109842|gb|EFN58079.1| hypothetical protein CHLNCDRAFT_142374 [Chlorella variabilis]
Length = 727
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 97/199 (48%), Gaps = 26/199 (13%)
Query: 58 VISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILL-----AT 112
V+ +++R S + H L+H+ FN+ AL +G +ER +G++ T LL A
Sbjct: 491 VVVHRELWRTAASQLAHIDLVHLAFNLSALWSIGL-VERTLGTLHYLQHTALLFLLSPAI 549
Query: 113 SNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLI-VIETSLSGAQSR-SVFGLF 170
I HLLI +V YR + A+G+S V+F + ++ TS G + VFGL
Sbjct: 550 CILIYHLLI--VVGQREQYR-----EVTAVGYSCVLFGWMSLMATSKPGGITMLPVFGLA 602
Query: 171 NIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSF--------- 221
+IP P L++ +L+ S +GHL G+L+G+A G F+ L P S
Sbjct: 603 SIPLWATPWASLLITSLLIPRASFVGHLAGMLAGYAVALGAFSWLNPWWSLSLLAWAAMG 662
Query: 222 --YSAIESSSLLSTCIRQP 238
Y+A S L+ IR P
Sbjct: 663 LSYAAARSRQLVILYIRLP 681
>gi|297817250|ref|XP_002876508.1| rhomboid family protein [Arabidopsis lyrata subsp. lyrata]
gi|297322346|gb|EFH52767.1| rhomboid family protein [Arabidopsis lyrata subsp. lyrata]
Length = 269
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 99/198 (50%), Gaps = 27/198 (13%)
Query: 26 TSAVVIVCGTIYLICLL--FGYDSF---YEICFLPSAVISRFQVYRFYTSIVFHGSLLHV 80
TS +V +C I+ + GY YE +A+ + +R TS + H S+LH+
Sbjct: 15 TSCIVTICSVIWFVIQKKSIGYSQVGLSYE-----TAIEGHY--WRMITSALSHISVLHL 67
Query: 81 LFNMLALVPLG--SELERI-MGSVRMFYITILLATSNAIL-----HLLIALLVAHIPFYR 132
+FNM AL LG +L + +G+ + T++L + +L HLLIA I ++R
Sbjct: 68 VFNMSALWSLGVVEQLGHVGLGTAYYLHYTLVLVVFSGVLVIGIYHLLIARF--KIDYFR 125
Query: 133 LQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNV 192
A+G+S V+F + I + + +FGL ++P + P L+ +++
Sbjct: 126 -----RVTAVGYSCVVFGWMTILSMKQPSSKLDLFGLLSLPISFAPFESLIFTSIIVPQA 180
Query: 193 SLLGHLCGILSGFAYTYG 210
S LGHL GIL G+A ++G
Sbjct: 181 SFLGHLSGILVGYAISWG 198
>gi|261203681|ref|XP_002629054.1| rhomboid protein 2 [Ajellomyces dermatitidis SLH14081]
gi|239586839|gb|EEQ69482.1| rhomboid protein 2 [Ajellomyces dermatitidis SLH14081]
gi|239608127|gb|EEQ85114.1| rhomboid protein 2 [Ajellomyces dermatitidis ER-3]
Length = 270
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 14/218 (6%)
Query: 14 RANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVF 73
R + +P FT V ++ ++ + +D +PS I +YR T +
Sbjct: 14 RLRSYILRLPLFTRVVTLLIAVFGVLGIQSLWDVVQWGALIPSE-IGLASLYRLNTYPII 72
Query: 74 HGSLLHVLFNMLALVPLGSELERIMGSVRMFYITI-LLATSNAILHLLIALLVAHIPFYR 132
H L H +N++AL PL E G++ + + L+T A L+LL F +
Sbjct: 73 HNGLFHTFWNIVALTPLLERFEAEHGTLTSVALFVGPLSTLPAGLYLL---------FEK 123
Query: 133 LQNVMDECAIGFSGVIFSLIVIETSLSGAQSRS--VFGLFNIPAKWYPLILLVLFQVLMT 190
+ + +G S IF L+ IE ++ Q+ V G + IP PL+L++L L+
Sbjct: 124 VILRGNTAVLGSSVWIFLLLGIE-AIKTFQTNPHFVIGTYRIPTWTTPLLLVILVFALVP 182
Query: 191 NVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESS 228
N SLLGHL G+ G+ + G+ L+P IE
Sbjct: 183 NTSLLGHLSGLAVGYVFGLGYLKFLVPPEKILRWIEGK 220
>gi|357128028|ref|XP_003565678.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
At3g17611-like [Brachypodium distachyon]
Length = 312
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 73/148 (49%), Gaps = 18/148 (12%)
Query: 63 QVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGS---VRMFYITILLATSNAILHL 119
+ RF++S +H S LH+L NM +L+ G ELE MGS M + L+ IL
Sbjct: 80 DLRRFFSSAFYHVSELHLLMNMTSLLSAGDELETSMGSFEFASMVAFLLGLSKGFTILLS 139
Query: 120 LIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPL 179
LL+ + Y Q+ + GFSGV+F + V+ L+G P K+
Sbjct: 140 KSLLLLGNNSAYYHQH-----SAGFSGVLFGMDVVLNDLAGEG----------PEKYAVC 184
Query: 180 ILLVLFQVLMTNVSLLGHLCGILSGFAY 207
L+L QVL+ S +GHL GIL+G Y
Sbjct: 185 ARLLLTQVLIPEASFIGHLGGILAGLTY 212
>gi|383847955|ref|XP_003699618.1| PREDICTED: rhomboid domain-containing protein 1-like [Megachile
rotundata]
Length = 247
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 84/166 (50%), Gaps = 11/166 (6%)
Query: 50 EICFLPSAVISRFQVYRFYTSIVF----HGSLLHVLFNMLALVPLGSELERIMGSVRMFY 105
E+C + I F+ YR + S + HGS +H+ +NM++L+ GS LE + G+ M +
Sbjct: 57 EVCI---STIKIFK-YRDWKSFIISNFEHGSDMHLYYNMVSLILKGSYLEPMYGT--MNF 110
Query: 106 ITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRS 165
+ +L S + +L A + +CAIGFS V+F+L VI +
Sbjct: 111 VILLAVLSFGCSAMYTSLGYALMQLTGDYGYYTQCAIGFSAVLFALKVIVVCEEQDRIHD 170
Query: 166 VFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGF 211
V GL +P+K + L+L +L+ S +GHL GIL G Y Y F
Sbjct: 171 VGGL-RVPSKIAVWVELILIHLLVPQSSFVGHLGGILVGCLYCYTF 215
>gi|15231701|ref|NP_191511.1| RHOMBOID-like protein 13 [Arabidopsis thaliana]
gi|6996288|emb|CAB75449.1| putative protein [Arabidopsis thaliana]
gi|332646414|gb|AEE79935.1| RHOMBOID-like protein 13 [Arabidopsis thaliana]
Length = 269
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 83/154 (53%), Gaps = 15/154 (9%)
Query: 65 YRFYTSIVFHGSLLHVLFNMLALVPLG--SELERI-MGSVRMFYITILLATSNAIL---- 117
+R TS + H S+LH++FNM AL LG +L + +G+ + T++L + +L
Sbjct: 52 WRMITSALSHISVLHLVFNMSALWSLGVVEQLGHVGLGTAYYLHYTLVLVVFSGVLVIGI 111
Query: 118 -HLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKW 176
HLLIA I ++R A+G+S V+F + I + + ++FGL ++P +
Sbjct: 112 YHLLIARF--KIDYFR-----RVTAVGYSCVVFGWMTILSVKQPSSKLNLFGLLSLPISF 164
Query: 177 YPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYG 210
P L+ +++ S LGHL GIL G+A ++G
Sbjct: 165 APFESLIFTSIIVPQASFLGHLSGILVGYAISWG 198
>gi|168005315|ref|XP_001755356.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693484|gb|EDQ79836.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 272
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 83/162 (51%), Gaps = 15/162 (9%)
Query: 57 AVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLG---SELERIMGSVRMF-YITILLAT 112
+VIS+ Q +RF TS H S LH++FNM AL LG S + +G+ Y TIL+
Sbjct: 45 SVISQGQYWRFITSAFSHISFLHLVFNMSALWSLGVVESFNDYNLGTAYYIQYTTILVLL 104
Query: 113 SNAIL----HLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFG 168
S ++ H+LI A + +YR A+G+S V+F + I + ++FG
Sbjct: 105 SGLMVLGMYHVLITR--AKLEYYR-----RVTAVGYSCVVFGWMTILAVRQPSLKLNLFG 157
Query: 169 LFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYG 210
L ++P P L+ +++ S LGHL GIL G+ +G
Sbjct: 158 LLSLPISLAPFESLIFTSIIVPQASFLGHLAGILVGYLIGWG 199
>gi|358385628|gb|EHK23224.1| hypothetical protein TRIVIDRAFT_168887 [Trichoderma virens Gv29-8]
Length = 260
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 112/255 (43%), Gaps = 22/255 (8%)
Query: 12 STRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSI 71
+ RA + +P FT A+++ +L L +D +P IS YR T
Sbjct: 9 TLRARSYIFRLPLFTRAILLGIACFWLASLPGYWDVRLWGSLIPDK-ISFATGYRLNTFP 67
Query: 72 VFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITI-LLATSNAILHLLIALLVAHIPF 130
+ H + LH + N +AL PL E G++ + L T A+L+L I + +
Sbjct: 68 LIHLNFLHAILNAVALTPLMERFESEYGTLTTLALFFGPLTTIPAVLYLFIEIAILR--- 124
Query: 131 YRLQNVMDECAIGFSGVIFSLIVIETSLS-GAQSRSVFGLFNIPAKWYPLILLVLFQVLM 189
+ +G S +F L+ +E + + V G +++P PL+++V+ L+
Sbjct: 125 ------ANHAVMGASIWVFLLLGMEAIRTYKSNPYLVIGTYHLPTWTTPLLMIVVVAALL 178
Query: 190 TNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESS-SLLS-----TCIRQPKF--- 240
+ SLLGHLCG+ G+ G+ LL P IES +LL+ + Q +
Sbjct: 179 PSTSLLGHLCGVGVGYIAGLGYVKLLAPPEWALRWIESRLNLLAILPHYVSVDQKTYGRF 238
Query: 241 -ILCTGGNPSGYIPT 254
+L T P G PT
Sbjct: 239 GVLPTTNRPVGSAPT 253
>gi|302883646|ref|XP_003040722.1| hypothetical protein NECHADRAFT_99865 [Nectria haematococca mpVI
77-13-4]
gi|256721612|gb|EEU35009.1| hypothetical protein NECHADRAFT_99865 [Nectria haematococca mpVI
77-13-4]
Length = 212
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 80/157 (50%), Gaps = 15/157 (9%)
Query: 65 YRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMG---SVRMFYITILLATSNAILHLLI 121
YR T + H + +H++ N+LAL PL E G SV +F+ L + A+++++I
Sbjct: 7 YRLSTFPLIHLNFIHMILNVLALTPLMERFENEHGTLISVALFFGP--LTSIPAVVYVII 64
Query: 122 ALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLS-GAQSRSVFGLFNIPAKWYPLI 180
+ +R N + +G S +F+L+ IE+ + A V G NIP PLI
Sbjct: 65 ERCI-----FRANNSI----LGASMWVFTLLAIESIRTYKANPHFVIGTVNIPTWTTPLI 115
Query: 181 LLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMP 217
+ ++ L+ SLLGHLCG+ G+ +G+ L P
Sbjct: 116 MCLVVAALVPRTSLLGHLCGVGIGYVAGFGYIKFLAP 152
>gi|302408283|ref|XP_003001976.1| rhomboid protein [Verticillium albo-atrum VaMs.102]
gi|261358897|gb|EEY21325.1| rhomboid protein [Verticillium albo-atrum VaMs.102]
Length = 266
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 109/256 (42%), Gaps = 26/256 (10%)
Query: 12 STRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSI 71
+ RA + + +P FT V+++ + + L +D +P +S YR T
Sbjct: 11 TARARTFVQRLPLFTRLVILIIFLAWAVGLQSTWDIRQWGSLVPDQ-LSFTSAYRINTFP 69
Query: 72 VFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITI-LLATSNAILHLLIALLVAHIPF 130
H +L+H + N+LAL PL E G++ + I L T A+ + +I LL+
Sbjct: 70 FIHVNLIHTILNILALTPLMDRFESEFGTLTSISLFIGPLTTIPAVAYTIIELLILR--- 126
Query: 131 YRLQNVMDECAIGFSGVIFSLIVIETSLS-GAQSRSVFGLFNIPAKWYPLILLVLFQVLM 189
+ +G S +F L+ +E + G + IP PLI+ V+ L+
Sbjct: 127 ------RNTPVMGASIWVFLLLGVEAIRTYKTNPYLTIGTWKIPTWTIPLIVAVVVSALV 180
Query: 190 TNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFI-------- 241
SLLGHLC + G+ + G+ L P +ES L+ R P ++
Sbjct: 181 PGTSLLGHLCSLGVGYLFGLGYLKFLAPPEWALRWVESK--LNLLGRLPHYVSVDQKTYG 238
Query: 242 ----LCTGGNPSGYIP 253
L +GG+ S +P
Sbjct: 239 RFGLLPSGGHASNNVP 254
>gi|432103473|gb|ELK30578.1| Rhomboid domain-containing protein 1 [Myotis davidii]
Length = 313
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 67/151 (44%), Gaps = 3/151 (1%)
Query: 66 RFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLV 125
R S H H+ FNM++++ G LER +GS Y+ + +++L +
Sbjct: 67 RLLLSPFHHADDWHLYFNMVSMLWKGIHLERRLGSRWFAYVITTFSLLTGVVYLFLEFAF 126
Query: 126 AHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLF 185
A + CA+GFSGV+F L V+ +V G F +P K+ LV
Sbjct: 127 AEC--MGEPDFKRSCAVGFSGVLFGLKVLNNHYFPGGFVNVLG-FPVPHKFSCWAELVAI 183
Query: 186 QVLMTNVSLLGHLCGILSGFAYTYGFFNLLM 216
++ S GHL GIL G Y +G +M
Sbjct: 184 HLITPGTSFAGHLAGILVGLMYIHGPLKKIM 214
>gi|449480819|ref|XP_004156004.1| PREDICTED: uncharacterized protein At3g17611-like [Cucumis sativus]
Length = 314
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 85/162 (52%), Gaps = 5/162 (3%)
Query: 47 SFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMF-Y 105
S E+ F + + RF S +H H+++NM++L+ G++LE MGS+
Sbjct: 45 SIDEVWFNAHLIFKHKDLKRFLLSPFYHVGDPHLVYNMISLLWKGTQLETSMGSIEFASM 104
Query: 106 ITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRS 165
+ LL S I LLI L+ + R E ++GFSGV+F++ V+ S + + +
Sbjct: 105 VGALLIMSQGITLLLIKSLLIFFNYGR--PYYYEYSVGFSGVLFAMKVVLGSETDSYTY- 161
Query: 166 VFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAY 207
V GL +P+ + L+L Q++ VS LGHL GIL+G +
Sbjct: 162 VHGL-RVPSSHAAWLELILIQMVSPGVSFLGHLGGILAGLLF 202
>gi|449457305|ref|XP_004146389.1| PREDICTED: uncharacterized protein At3g17611-like [Cucumis sativus]
Length = 314
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 85/162 (52%), Gaps = 5/162 (3%)
Query: 47 SFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMF-Y 105
S E+ F + + RF S +H H+++NM++L+ G++LE MGS+
Sbjct: 45 SIDEVWFNAHLIFKHKDLKRFLLSPFYHVGDPHLVYNMISLLWKGTQLETSMGSIEFASM 104
Query: 106 ITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRS 165
+ LL S I LLI L+ + R E ++GFSGV+F++ V+ S + + +
Sbjct: 105 VGALLIMSQGITLLLIKSLLIFFNYGR--PYYYEYSVGFSGVLFAMKVVLGSETDSYTY- 161
Query: 166 VFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAY 207
V GL +P+ + L+L Q++ VS LGHL GIL+G +
Sbjct: 162 VHGL-RVPSSHAAWLELILIQMVSPGVSFLGHLGGILAGLLF 202
>gi|344257225|gb|EGW13329.1| Rhomboid domain-containing protein 1 [Cricetulus griseus]
Length = 298
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 23/203 (11%)
Query: 66 RFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLV 125
R S + H H+ FNM++++ G +LER +G+ Y+ + +++L++ +
Sbjct: 67 RLLLSPLHHADDWHLYFNMVSMLWKGIKLERRLGTRWFAYLLTTFSLLTGVVYLVLQFTL 126
Query: 126 AHI---PFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILL 182
A + P +R CA+GFSGV+F+L V+ +V G F +P + L
Sbjct: 127 AELMNQPDFR-----RNCAVGFSGVLFALKVLSNHYFPGGFVNVLG-FLVPNRLACWAEL 180
Query: 183 VLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFIL 242
V S GHL GIL G YT G +M + S ++
Sbjct: 181 VAIHFCTPGTSFAGHLAGILVGLMYTQGPLKKIMETCAGPSGYQNHY------------- 227
Query: 243 CTGGNPSGYIPTYSGQNTSSSGL 265
G P Y T+ + ++GL
Sbjct: 228 -PDGRPRAYEDTHRNYDVYTAGL 249
>gi|449509605|ref|XP_002194576.2| PREDICTED: rhomboid-related protein 4 [Taeniopygia guttata]
Length = 314
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 86/181 (47%), Gaps = 13/181 (7%)
Query: 50 EICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITIL 109
E C + + R R + H H+ +NM++++ G LER + S+ YI +
Sbjct: 51 EACLSVNEAVYRKNWQRLLLAPFHHADDWHLYYNMISMLWKGIMLERKLKSIWFAYIIAV 110
Query: 110 LATSNAILHLLIALLVAHI---PFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSV 166
+ I+++++ LL+ I P Y + C +GFSGV+F+L V+ + + SV
Sbjct: 111 FSVLIGIVYMVLELLLVIILDDPSYEMN-----CGVGFSGVLFALKVLNNHYNPGRVSSV 165
Query: 167 FGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLM----PGTSFY 222
GL I +K+ + L+ + S GHL GIL G YT G +M G SF+
Sbjct: 166 LGL-PISSKYACWVELLAIHFISPGTSFAGHLSGILVGLMYTMGPLKKIMQACAAGISFF 224
Query: 223 S 223
+
Sbjct: 225 T 225
>gi|340725934|ref|XP_003401319.1| PREDICTED: rhomboid domain-containing protein 1-like [Bombus
terrestris]
Length = 247
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 82/167 (49%), Gaps = 13/167 (7%)
Query: 50 EICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITIL 109
E+C V F S HGS +H+ +NM++L+ GS LE + G++ IL
Sbjct: 57 EVCISAIKVFKYRDWNSFLISNFEHGSDMHLYYNMVSLILKGSYLEPMYGTINF---VIL 113
Query: 110 LATSNAILHLLIALLVAHIPFYRLQNVMD-----ECAIGFSGVIFSLIVIETSLSGAQSR 164
L AIL + + A + + +Q D +CAIGFS ++F+L VI + +
Sbjct: 114 L----AILSFGCSTMYAGLGYALMQLTGDYGYYTQCAIGFSAILFALKVIVVCEEYDRIQ 169
Query: 165 SVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGF 211
V G F + +K + L+L +L+ S +GHL GIL G Y Y F
Sbjct: 170 DVGG-FRVSSKIAVWVELILIHLLVPQSSFIGHLGGILVGCLYCYTF 215
>gi|212534322|ref|XP_002147317.1| rhomboid family protein, putative [Talaromyces marneffei ATCC
18224]
gi|210069716|gb|EEA23806.1| rhomboid family protein, putative [Talaromyces marneffei ATCC
18224]
Length = 273
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 105/223 (47%), Gaps = 16/223 (7%)
Query: 22 IPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVL 81
+P FT AV+++ +L+ L +D +P+ IS +YR T V H H+L
Sbjct: 27 LPLFTRAVLLIIFAFWLLELQSVWDVVQWGALIPNE-ISIATLYRTNTYPVIHNGFFHML 85
Query: 82 FNMLALVPLGSELERIMGSVRMFYITI-LLATSNAILHLLIALLVAHIPFYRLQNVMDEC 140
N++AL+PL E G++ + + L+T A L++L+ Y L + +
Sbjct: 86 LNVVALMPLLERFEAEHGTLTALLLFVGPLSTFPAALYILVEK-------YILSS--NTA 136
Query: 141 AIGFSGVIFSLIVIETSLSGAQSRSVF--GLFNIPAKWYPLILLVLFQVLMTNVSLLGHL 198
+G S +F L+ E ++ ++ F G +P PL + + VL++N S LGH+
Sbjct: 137 VVGASVWVFLLLASE-AIKTFRTNPYFQVGTLKVPTWTTPLFVSFVVAVLLSNTSFLGHI 195
Query: 199 CGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFI 241
CG++ G+ G+ + +P IE L+ R P ++
Sbjct: 196 CGMIFGYLLGLGYLKVFVPPEKILRFIEGK--LNLLGRLPHYV 236
>gi|242094106|ref|XP_002437543.1| hypothetical protein SORBIDRAFT_10g029120 [Sorghum bicolor]
gi|241915766|gb|EER88910.1| hypothetical protein SORBIDRAFT_10g029120 [Sorghum bicolor]
Length = 344
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 95/195 (48%), Gaps = 14/195 (7%)
Query: 21 SIPFFTSAVVIVCGTIYLI--CLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLL 78
S P T+A++ IYL L S + F P ++ + RF+ S +H S
Sbjct: 39 SRPPVTAALLAANSLIYLRPGALDGVLPSLSRVSFNPQLIVEYGDLVRFFLSPFYHLSES 98
Query: 79 HVLFNMLALVPLGSELERIMGSVRMFYIT-ILLATSNAILHLLIALLVA---HIPFYRLQ 134
H+ +NM +L+ G +LE MGS ++ +LL S I LL L+ +Y
Sbjct: 99 HLFYNMTSLLWKGIQLETSMGSTEFASMSAVLLGLSQGITLLLSRGLLLLGDDTAYY--- 155
Query: 135 NVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSL 194
D+ A+GFSG++F++ V+ + S + G+ +P+K+ L+L QV + S
Sbjct: 156 ---DQHAVGFSGILFAMKVVLNAWSD-DFVYLHGMI-LPSKYAAWAELILIQVFIPGTSF 210
Query: 195 LGHLCGILSGFAYTY 209
LG L GIL+G Y +
Sbjct: 211 LGQLGGILAGLVYLW 225
>gi|350397339|ref|XP_003484847.1| PREDICTED: rhomboid domain-containing protein 1-like [Bombus
impatiens]
Length = 247
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 13/167 (7%)
Query: 50 EICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITIL 109
E+C V F S HGS +H+ +NM++L+ GS LE + G++ ++ +L
Sbjct: 57 EVCISAIKVFKYHDWNSFLISNFEHGSDMHLYYNMVSLILKGSYLEPMYGTIN--FVMLL 114
Query: 110 LATSNAILHLLIALLVAHIPFYRLQNVMD-----ECAIGFSGVIFSLIVIETSLSGAQSR 164
AIL + + A + + +Q D +CAIGFS ++F+L VI + +
Sbjct: 115 -----AILSFGCSTMYAGLGYALMQLTGDYGYYTQCAIGFSAILFALKVIVVCEEYDRIQ 169
Query: 165 SVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGF 211
V G F + +K + L+L +L+ S +GHL GIL G Y Y F
Sbjct: 170 DVGG-FRVSSKIAVWVELILIHLLVPQSSFIGHLGGILVGCLYCYTF 215
>gi|395823332|ref|XP_003784941.1| PREDICTED: rhomboid domain-containing protein 1 [Otolemur
garnettii]
Length = 316
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 70/151 (46%), Gaps = 3/151 (1%)
Query: 66 RFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLV 125
R S + H H+ FNM++++ G LER +GS ++ ++ S + + L
Sbjct: 67 RLLLSPLHHADDWHLYFNMVSMLWKGINLERRLGS--RWFACVIATFSLLTGLVYLLLQF 124
Query: 126 AHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLF 185
A F R + CA+GFSGV+F+L V+ +V G F +P ++ LV
Sbjct: 125 ALAEFMREPELRRSCAVGFSGVLFALKVLNNHYFPGGFVNVLG-FPVPNRFACWAELVAI 183
Query: 186 QVLMTNVSLLGHLCGILSGFAYTYGFFNLLM 216
+ S GHL GIL G YT G +M
Sbjct: 184 HLFSPGTSFAGHLAGILVGLMYTQGPLKKIM 214
>gi|298713038|emb|CBJ48813.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 379
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 91/191 (47%), Gaps = 11/191 (5%)
Query: 55 PSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYI--TILLAT 112
P + F+VYR T++ G LL V+ ++ +G LER +GS + + T+ + T
Sbjct: 25 PFRTVESFEVYRVVTTVFCSGGLLAVILGLMNFNTVGPNLERSLGSTGLLALMATLTVVT 84
Query: 113 SNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGL-FN 171
+ A + L L++ Y + + G ++ +LI +E + R F L ++
Sbjct: 85 NLAFIALCYVLVILGEKKYAFYS-----SSGIWNLLVALIAVECMATPDVPRRFFILPWD 139
Query: 172 IPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLL 231
IP K+YPL L +F + + + C + G+AY G + L P S ++ ES L
Sbjct: 140 IPGKYYPLFLACIFGFMRG--AWMDLFCAVGIGYAYADGRLDRLKPSRSRLASWESGC-L 196
Query: 232 STCIRQPKFIL 242
+ + +P +I+
Sbjct: 197 ANFVERPGYIV 207
>gi|385809854|ref|YP_005846250.1| hypothetical protein IALB_1272 [Ignavibacterium album JCM 16511]
gi|383801902|gb|AFH48982.1| Hypothetical protein IALB_1272 [Ignavibacterium album JCM 16511]
Length = 267
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 72/152 (47%), Gaps = 17/152 (11%)
Query: 62 FQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLI 121
FQV++ T HG H+ FNM AL G+E+E I+GS + + + +LHL I
Sbjct: 32 FQVWQLITYQFMHGGFGHIFFNMFALWMFGAEVEYILGSKKFLIFYLFSGITAGLLHLFI 91
Query: 122 ALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLI- 180
+ L+ P IG SG +F ++ L R +F F IP K LI
Sbjct: 92 SPLLGS-PL--------AVTIGASGAVFGVMTAFAML--FPDRYIFLYFLIPVKAKYLIG 140
Query: 181 LLVLFQVL-----MTNVSLLGHLCGILSGFAY 207
L++F+ L +NV+ L HL G L GF +
Sbjct: 141 FLIVFEFLAIDSAASNVAHLAHLGGALFGFLF 172
>gi|310795033|gb|EFQ30494.1| rhomboid family protein [Glomerella graminicola M1.001]
Length = 266
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 107/245 (43%), Gaps = 20/245 (8%)
Query: 1 MRPNIVSEAGLSTRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVIS 60
M P++ S + L RA + +P FT V+++ + + +D +P +S
Sbjct: 1 MAPSVTSFSTL--RARTYVLRLPLFTRIVLLIIVVASIAGVQSAWDMRQWGALIPDQ-LS 57
Query: 61 RFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITI-LLATSNAILHL 119
YR T H + +H + N+LAL PL E G++ + I L T AIL++
Sbjct: 58 FTSSYRMNTFPFIHKNFIHAIMNILALAPLMERFEAEFGTLTSISLFIGPLTTIPAILYV 117
Query: 120 LIALLVAHIPFYRLQNVMDECAIGFSGVIFSLI---VIETSLSGAQSRSVFGLFNIPAKW 176
LI R + +G S +F L+ I T + Q ++IP
Sbjct: 118 LIE---------RFLFKGNVGVMGASIWVFLLLGREAIRTYKTNPQL--TIATYSIPTWT 166
Query: 177 YPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIR 236
PLIL+++ L+ SLLGHLCG+ G+ + G+ L P +ES L+ R
Sbjct: 167 TPLILILVVTALVPGTSLLGHLCGVFVGYLFGLGYLKFLSPPEKALRWVESK--LNLLGR 224
Query: 237 QPKFI 241
P ++
Sbjct: 225 LPHYV 229
>gi|238487390|ref|XP_002374933.1| rhomboid family protein, putative [Aspergillus flavus NRRL3357]
gi|317143610|ref|XP_001819579.2| rhomboid protein 2 [Aspergillus oryzae RIB40]
gi|220699812|gb|EED56151.1| rhomboid family protein, putative [Aspergillus flavus NRRL3357]
Length = 270
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 97/231 (41%), Gaps = 16/231 (6%)
Query: 14 RANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVF 73
R + +P FT VV+ +L+ L + P I +YR T
Sbjct: 16 RVRSYLLRLPLFTRLVVLAIIVFWLLELQTVWSVVQWGALAPDE-IGFGSMYRLNTYPFI 74
Query: 74 HGSLLHVLFNMLALVPLGSELERIMGSVRMFYITI-LLATSNAILHLLIALLVAHIPFYR 132
H H N++AL PL E G++ + + L+T A L+LL+ + H
Sbjct: 75 HNGFFHAFLNLVALTPLVERFEAEHGTLTAVALFLGPLSTFPAGLYLLVEKFLLH----- 129
Query: 133 LQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGL--FNIPAKWYPLILLVLFQVLMT 190
+ +G S +F L+ E ++ +S F L + IP PL ++ +LM+
Sbjct: 130 ----RNTAVLGASVWVFLLLGTE-AIKTFKSHPYFSLGNYKIPTWTSPLFACIVVSILMS 184
Query: 191 NVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFI 241
N S LGHLC IL G+ + G+ + +P IE L+ R P ++
Sbjct: 185 NTSFLGHLCAILIGYLFGLGYLKVFVPPEKVLRWIEGK--LNLLGRLPHYV 233
>gi|154422081|ref|XP_001584053.1| Clan S-, family S54, Rhomboid-like serine peptidase [Trichomonas
vaginalis G3]
gi|121918298|gb|EAY23067.1| Clan S-, family S54, Rhomboid-like serine peptidase [Trichomonas
vaginalis G3]
Length = 256
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 79/163 (48%), Gaps = 4/163 (2%)
Query: 45 YDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMF 104
Y +++ +P + R ++ +TS H S H+ N++ + S +E+ G +F
Sbjct: 36 YREYWKYALIPYEIEIR-NFWKLFTSPFVHSSFPHLFLNIVFIWQRFSHIEKRAGMAFLF 94
Query: 105 YITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSR 164
L + + + I +L + + L + IG + ++ +L VIE+ LS
Sbjct: 95 MHVFLFSVLIGLTYSGIIILFSVAGCFGLYY---KPVIGMTSILLALNVIESQLSSNPYS 151
Query: 165 SVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAY 207
S+ GL ++P +W P+ + + + + ++NVS H+C + G+ Y
Sbjct: 152 SLLGLIHVPTRWLPIAISITYHIALSNVSTFAHICALTVGYTY 194
>gi|354501643|ref|XP_003512899.1| PREDICTED: rhomboid domain-containing protein 1-like [Cricetulus
griseus]
Length = 307
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 72/154 (46%), Gaps = 9/154 (5%)
Query: 66 RFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLV 125
R S + H H+ FNM++++ G +LER +G+ Y+ + +++L++ +
Sbjct: 67 RLLLSPLHHADDWHLYFNMVSMLWKGIKLERRLGTRWFAYLLTTFSLLTGVVYLVLQFTL 126
Query: 126 AHI---PFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILL 182
A + P +R CA+GFSGV+F+L V+ +V G F +P + L
Sbjct: 127 AELMNQPDFR-----RNCAVGFSGVLFALKVLSNHYFPGGFVNVLG-FLVPNRLACWAEL 180
Query: 183 VLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLM 216
V S GHL GIL G YT G +M
Sbjct: 181 VAIHFCTPGTSFAGHLAGILVGLMYTQGPLKKIM 214
>gi|385303446|gb|EIF47519.1| rbd2p [Dekkera bruxellensis AWRI1499]
Length = 298
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 89/186 (47%), Gaps = 12/186 (6%)
Query: 29 VVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALV 88
+V VC + LF + ++ P ++ ++ R + + H H+ FN+L+L
Sbjct: 33 IVCVCIIVVYXASLFNGNIXSDMALKPDSLFHISELPRLSSYVWXHSGFFHLFFNVLSLW 92
Query: 89 PLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVI 148
+E ER G+ + +LAT+ AI + L+ L F+ + +G SG +
Sbjct: 93 APLAEFERTNGTFHTALVLSILATAVAIPYCLLGXL-----FFP-----NTVVLGASGWV 142
Query: 149 FSLIVIETSLSGAQSRSV--FGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFA 206
FSLI + ++ R+V F + +P P I ++ +++ N SL+GH GI++GF
Sbjct: 143 FSLISYFSYVNSLSHRTVKLFNSWEVPTLSIPFIFMLTVFLMVPNSSLIGHFLGIVTGFL 202
Query: 207 YTYGFF 212
G+F
Sbjct: 203 LAKGWF 208
>gi|123438806|ref|XP_001310181.1| Clan S-, family S54, Rhomboid-like serine peptidase [Trichomonas
vaginalis G3]
gi|121891940|gb|EAX97251.1| Clan S-, family S54, Rhomboid-like serine peptidase [Trichomonas
vaginalis G3]
Length = 250
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 94/196 (47%), Gaps = 13/196 (6%)
Query: 23 PF-FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVL 81
PF + +++I+CG ++ +PS ++ +FQ++R T F+ S++H+L
Sbjct: 7 PFIYAISILILCGCFLAKEFYIPVPVMWKFAMIPSKIL-KFQIWRLLTYHFFNTSIVHLL 65
Query: 82 FNMLALVPLGSELERIMGS----VRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVM 137
+ +G++LE +G + +F ++IL+ + ALL I ++ N
Sbjct: 66 ICVAIFFHIGNDLENKVGHFGFVIHLFILSILIGACYTVG----ALLTISIDSFKTFNYP 121
Query: 138 DECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGH 197
G + ++ I+ ++ + +SVFG+ ++P K YPL++L L+ + + L
Sbjct: 122 ---IFGTFSLSMAISAIDVYITDHRYKSVFGIIHVPTKLYPLVMLCLYHIALPEACYLSS 178
Query: 198 LCGILSGFAYTYGFFN 213
G+L G Y +F
Sbjct: 179 FAGLLVGILYAITYFQ 194
>gi|66819575|ref|XP_643447.1| hypothetical protein DDB_G0275611 [Dictyostelium discoideum AX4]
gi|60471600|gb|EAL69556.1| hypothetical protein DDB_G0275611 [Dictyostelium discoideum AX4]
Length = 458
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 67/135 (49%), Gaps = 9/135 (6%)
Query: 107 TILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSV 166
++L++ N IL L+ L +Y C++GFSG IF+L+ I S+
Sbjct: 231 SVLISMMNFILSLVAYYLDIGYSYY-------SCSVGFSGCIFALLTIHCF--NDNLVSL 281
Query: 167 FGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIE 226
+G+ IP+K YP +L++ ++ S +GHL GIL G Y G+ N + + IE
Sbjct: 282 YGITRIPSKLYPWAILIITNFILPMTSFVGHLSGILIGTLYMNGYLNCFILSERRFCEIE 341
Query: 227 SSSLLSTCIRQPKFI 241
S+ L+ Q FI
Sbjct: 342 LSNNLNFITNQRGFI 356
>gi|167523737|ref|XP_001746205.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775476|gb|EDQ89100.1| predicted protein [Monosiga brevicollis MX1]
Length = 280
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Query: 52 CFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLA 111
C LP+A++ R + ++ H S H+ +NM++L+ G +LE +G+ RM +T L
Sbjct: 122 CLLPAAIVEGQAWLRLFWPVILHTSSYHLYYNMVSLLYKGRKLEPRLGTERMLMLTALFG 181
Query: 112 TSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSL 151
+LH +A L+ FY + C++GFSGV+F+L
Sbjct: 182 VGGNMLHTGLAYLLHLAGFY---DSYVSCSVGFSGVLFAL 218
>gi|344233876|gb|EGV65746.1| hypothetical protein CANTEDRAFT_112606 [Candida tenuis ATCC 10573]
Length = 284
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 76/174 (43%), Gaps = 16/174 (9%)
Query: 61 RFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLL 120
RF + R +++H H L N+LA+ ER G+V LLA + + + L
Sbjct: 58 RFDLNRVSFYVLYHTGFTHYLVNILAIAAPMCHFERAHGTVHTGITLNLLAVTAGLQYCL 117
Query: 121 IALLVAHIPFYRLQNVMDECAIGFSGVIFSLI----VIETSLSGAQSRSVFGLFNI--PA 174
+ + P R+ IG SG+IFS + V E R +I P
Sbjct: 118 LGSFL--YPNTRV--------IGLSGIIFSFVTYFAVKEHEFQPVSFRFPLNGTDISLPT 167
Query: 175 KWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESS 228
K+ P + L + V+ S GHL GI SG+ YG N+L P +S AIE+
Sbjct: 168 KYSPFVSLAIVTVIFPGSSFFGHLAGISSGYLLAYGKLNILYPPSSIIVAIENK 221
>gi|302837730|ref|XP_002950424.1| hypothetical protein VOLCADRAFT_117545 [Volvox carteri f.
nagariensis]
gi|300264429|gb|EFJ48625.1| hypothetical protein VOLCADRAFT_117545 [Volvox carteri f.
nagariensis]
Length = 353
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 76/144 (52%), Gaps = 7/144 (4%)
Query: 63 QVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITI--LLATSNAILHLL 120
Q +R TS H H+ FNM +LV G LER G ++F + + +L S+ L++L
Sbjct: 81 QWWRLITSGFLHMDEWHLYFNMSSLVWKGIHLERRYGH-KLFALLVAEMLLLSHG-LYVL 138
Query: 121 IALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLI 180
+ LL+ + +R + A+GFS V+F L I + +FG+ +P K+
Sbjct: 139 VTLLLCSVSEHR-HIYYHQHAVGFSAVLFGLKTILMYNTPGYD-EIFGV-RVPTKYACWA 195
Query: 181 LLVLFQVLMTNVSLLGHLCGILSG 204
LVL VL+ S +GHLCGIL+G
Sbjct: 196 ELVLIWVLVPKSSFIGHLCGILAG 219
>gi|225683990|gb|EEH22274.1| rhomboid protein [Paracoccidioides brasiliensis Pb03]
Length = 250
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 85/181 (46%), Gaps = 15/181 (8%)
Query: 64 VYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITI-LLATSNAILHLLIA 122
+YR T + H L H +N+LAL PL E G++ + I +T A L+LL+
Sbjct: 43 MYRLNTYPIIHNGLFHTFWNILALTPLLERFEAEHGTLTSVALFIGPFSTLPAGLYLLVE 102
Query: 123 LLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRS--VFGLFNIPAKWYPLI 180
++ + +G S IF L+ +E ++ Q+ V G + IP PL+
Sbjct: 103 KVILR---------GNTPVLGSSVWIFLLLGVE-AIKTFQTNPHFVLGSYRIPTWTTPLL 152
Query: 181 LLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKF 240
++++ L+ N S LGHLCG+ G+ + G+ L+P IE L+ R P +
Sbjct: 153 IVLVVFALIPNTSFLGHLCGVAIGYLFGLGYLKFLVPPEKILRWIEGK--LNLLGRLPHY 210
Query: 241 I 241
+
Sbjct: 211 V 211
>gi|326432288|gb|EGD77858.1| hypothetical protein PTSG_09492 [Salpingoeca sp. ATCC 50818]
Length = 433
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 93/199 (46%), Gaps = 12/199 (6%)
Query: 51 ICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILL 110
+C P+ I FQ++R +T V H +L+H + NM+ L+ + S LE MGSVR ++ + +
Sbjct: 40 LCLQPATAIMYFQLHRLFTYAVIHRNLIHFVLNMIGLLMVSSRLETSMGSVRYAHMFLAM 99
Query: 111 ATSNAILHLL---IALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSR--S 165
A+ + + +A L+ I F + + C IG + + ++ VI S S
Sbjct: 100 TAVVAVTYCMGAALAYLIVGINF----SFWNICTIGLTSPLLTMAVIYVYCFSTSSSVIS 155
Query: 166 VFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMP-GTSFYSA 224
V+GL +P P ++L+ L T S + G++ G+ Y G M S
Sbjct: 156 VYGL-QMPPTILPPLMLICTHFLPTT-SFWCNFTGLVMGYMYVQGVVQQRMQLSRSAVLT 213
Query: 225 IESSSLLSTCIRQPKFILC 243
+ESS+L F+ C
Sbjct: 214 LESSTLGQRLSTWNTFVRC 232
>gi|242789902|ref|XP_002481457.1| rhomboid family protein, putative [Talaromyces stipitatus ATCC
10500]
gi|218718045|gb|EED17465.1| rhomboid family protein, putative [Talaromyces stipitatus ATCC
10500]
Length = 272
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 97/224 (43%), Gaps = 18/224 (8%)
Query: 22 IPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQ-VYRFYTSIVFHGSLLHV 80
+P FT AV++ +L+ L +D +P S F +YR T V H H
Sbjct: 26 LPLFTRAVLLFIVAFWLLELQSVWDVVTWGAIIPDE--SNFAALYRLNTYPVIHRGFFHA 83
Query: 81 LFNMLALVPLGSELERIMGSVRMFYITI-LLATSNAILHLLIALLVAHIPFYRLQNVMDE 139
L N AL PL E G++ + + L+T L++++ + H +
Sbjct: 84 LLNAAALTPLLERFEAEHGTLTALLLFVGPLSTFPGALYIIVEKFILH---------NNT 134
Query: 140 CAIGFSGVIFSLIVIETSLSGAQSRSVF--GLFNIPAKWYPLILLVLFQVLMTNVSLLGH 197
+G S +F L+ E S+ ++ F G +P PL + + VL++N S LGH
Sbjct: 135 AVVGASVWVFLLLASE-SIKTFRTNPYFQVGTLKVPTWTTPLFVSFVVAVLLSNTSFLGH 193
Query: 198 LCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFI 241
+CGI+ G+ G+ + +P IE L+ R P ++
Sbjct: 194 VCGIIFGYLLGLGYLKIFVPPEKILRFIEGK--LNLLGRLPHYV 235
>gi|429849740|gb|ELA25087.1| rhomboid protein 2 [Colletotrichum gloeosporioides Nara gc5]
Length = 266
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 105/243 (43%), Gaps = 16/243 (6%)
Query: 1 MRPNIVSEAGLSTRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVIS 60
M N+ S + L RA + +P FT V++ + L +D +P +S
Sbjct: 1 MASNVTSFSTL--RARSYIFRLPLFTRIVLLAIVAAWAASLQPAWDVKQWGALIPDQ-LS 57
Query: 61 RFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITI-LLATSNAILHL 119
YR T H + +HV+ N+ AL PL E G++ + I L+T A++++
Sbjct: 58 FTSSYRMNTYPFVHVNFIHVILNLAALTPLLERFEAEFGTLTSIALFIGPLSTIPAVVYV 117
Query: 120 LIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLS-GAQSRSVFGLFNIPAKWYP 178
LI R + +G S +F L+ +E + +IP P
Sbjct: 118 LIE---------RFLFKGNVSVMGASVWVFLLLGMEAIRTYKTNPYLTIATHSIPTWTTP 168
Query: 179 LILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQP 238
LIL+++ L+ SLLGHLCG+L G+ + G+ L P +ES L+ R P
Sbjct: 169 LILVLVVTALVPGTSLLGHLCGVLVGYLFGLGYLKFLSPPEKALRWVESK--LNLLGRLP 226
Query: 239 KFI 241
++
Sbjct: 227 HYV 229
>gi|451855577|gb|EMD68869.1| hypothetical protein COCSADRAFT_33724 [Cochliobolus sativus ND90Pr]
gi|452005023|gb|EMD97479.1| hypothetical protein COCHEDRAFT_1125049 [Cochliobolus
heterostrophus C5]
Length = 262
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 100/223 (44%), Gaps = 17/223 (7%)
Query: 22 IPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVL 81
+PF T VV +++ + F + ++ L A + Q++R V H + +H++
Sbjct: 21 LPFCTKVVVAAIVGLWIATIPFPW--IRDVGRLEPAKMDFTQMHRLNLFPVLHWNFIHMI 78
Query: 82 FNMLALVPLGSELERIMGS-VRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDEC 140
FN+ A+ PL E G+ V + T T ++ L+ V +
Sbjct: 79 FNLFAVTPLIERFESEYGTLVTLALFTGPFGTIPGGVYTLLEKFVLR---------SNTA 129
Query: 141 AIGFSGVIFSLIVIETSLSGAQSRSVF--GLFNIPAKWYPLILLVLFQVLMTNVSLLGHL 198
+G S +F L+ E + ++ F G + IP PLIL+V+ +L+ VSL+GHL
Sbjct: 130 VMGASVWVFLLLSAEV-MKTQKTNPFFSVGPYKIPTWTTPLILIVITSILVPYVSLVGHL 188
Query: 199 CGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFI 241
CG G+ + G+ L+P IE+ L+ R P ++
Sbjct: 189 CGAGLGYLWATGYIKFLVPHEKILRWIETK--LNLLGRLPHYV 229
>gi|327349312|gb|EGE78169.1| rhomboid protein 2 [Ajellomyces dermatitidis ATCC 18188]
Length = 275
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 98/223 (43%), Gaps = 19/223 (8%)
Query: 14 RANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVF 73
R + +P FT V ++ ++ + +D +PS I +YR T +
Sbjct: 14 RLRSYILRLPLFTRVVTLLIAVFGVLGIQSLWDVVQWGALIPSE-IGLASLYRLNTYPII 72
Query: 74 HGSLLHVLFNMLALVPLGSELERIMGSVRMFYITI-LLATSNAILHLLIALLVAHIPFYR 132
H L H +N++AL PL E G++ + + L+T A L+LL F +
Sbjct: 73 HNGLFHTFWNIVALTPLLERFEAEHGTLTSVALFVGPLSTLPAGLYLL---------FEK 123
Query: 133 LQNVMDECAIGFSGVIFSLIVIETSLSGAQSRS--VFGLFNIPAKWYPLILLVLFQVLMT 190
+ + +G S IF L+ IE ++ Q+ V G + IP PL+L++L L+
Sbjct: 124 VILRGNTAVLGSSVWIFLLLGIE-AIKTFQTNPHFVIGTYRIPTWTTPLLLVILVFALVP 182
Query: 191 NVSLLGHLCGILSGFAYT-----YGFFNLLMPGTSFYSAIESS 228
N SLLGHL G+ G+ Y G+ L+P IE
Sbjct: 183 NTSLLGHLSGLAVGYVYMKNEVGLGYLKFLVPPEKILRWIEGK 225
>gi|340518817|gb|EGR49057.1| predicted protein [Trichoderma reesei QM6a]
Length = 281
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 90/196 (45%), Gaps = 12/196 (6%)
Query: 12 STRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSI 71
+ RA + +P FT A+++ +L+ L +D +P IS YR T
Sbjct: 9 TLRARSYVLRLPLFTRAILLSIAAFWLLSLPGYWDVRLWGSLIPDK-ISFATGYRLNTFP 67
Query: 72 VFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITI-LLATSNAILHLLIALLVAHIPF 130
+ H + H + N +AL PL E G++ + L T A+L+L I + +
Sbjct: 68 LVHLNFFHAVLNAVALAPLMERFESEYGTLTTLALFFGPLTTIPAVLYLFIEIAILR--- 124
Query: 131 YRLQNVMDECAIGFSGVIFSLIVIETSLS-GAQSRSVFGLFNIPAKWYPLILLVLFQVLM 189
+ +G S +F L+ +E + + V G +++P PL+++V+ L+
Sbjct: 125 ------ANHAVMGASMWVFLLLGMEAIRTYKSNPYLVIGTYHLPTWTTPLLMIVVVAALV 178
Query: 190 TNVSLLGHLCGILSGF 205
N SLLGHLCG+ G+
Sbjct: 179 PNTSLLGHLCGVAVGY 194
>gi|224095662|ref|XP_002310428.1| predicted protein [Populus trichocarpa]
gi|222853331|gb|EEE90878.1| predicted protein [Populus trichocarpa]
Length = 269
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 112/248 (45%), Gaps = 41/248 (16%)
Query: 65 YRFYTSIVFHGSLLHVLFNMLALVPLG--SELERIMGSVRMF--YITILLATSNAILHLL 120
+R TS H S++H++FNM AL LG +L I V + + +L+ S A++ +
Sbjct: 52 WRIITSAFSHISVIHLVFNMSALWSLGVVEQLGHIGLGVAYYLHHTLVLVVLSGALVLGM 111
Query: 121 IALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLI 180
LL+ ++++ A+G+S V+F + I + + +FG ++P + P
Sbjct: 112 YHLLIQR---FKIEYFRSVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFE 168
Query: 181 LLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKF 240
L+ +++ S LGHL GI+ G+A +G L+ G + Y AI S+L
Sbjct: 169 SLIFTSIIVPQASFLGHLSGIVVGYAIAWG----LIHGMNNYWAI---SML--------- 212
Query: 241 ILCTGGNPSGYIPTYSGQNTSSSGLFSGNIWSNLSSWMPQRETSSQPTQDS-RFPGRGRT 299
G+I + SG + + + E+ + P+ S RF G GRT
Sbjct: 213 ---------GWIVLVFVVSLKRSGAYDFD--------FLEIESVTDPSLPSVRFLGSGRT 255
Query: 300 LSSSQSPV 307
L S PV
Sbjct: 256 LQESSLPV 263
>gi|420152492|ref|ZP_14659536.1| peptidase, S54 family [Actinomyces massiliensis F0489]
gi|394764617|gb|EJF46356.1| peptidase, S54 family [Actinomyces massiliensis F0489]
Length = 279
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 24/207 (11%)
Query: 2 RPNIVSEAGLSTRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISR 61
R N S G+S+ + T ++I C TIYL+ + + F+P+ ++
Sbjct: 52 RRNASSRRGVSSLLGGRAITDALVTKGLIIACVTIYLVQMALPSLG-AQFAFVPA--VAS 108
Query: 62 FQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLI 121
Q +RF T+ H SL+H+ FNM AL LGS LE I+G R + L A + + +
Sbjct: 109 SQPWRFMTTAFLHASLMHLAFNMWALWVLGSALEPILGRWRFAALCALSALGGSTMIYWL 168
Query: 122 ALLVAHIPFYRLQNVMDECAIGFSGVIF----SLIVIETSLSGAQSRSVFGLFNIPAKWY 177
A A P L + +G SG +F +L +I+ G + ++ GL
Sbjct: 169 ASPTA--PASWLTST-----VGASGAVFGLFAALFIIQRRF-GRDTSAIVGL-------- 212
Query: 178 PLILLVLFQVLMTNVSLLGHLCGILSG 204
L+L + + N+S GHL G+++G
Sbjct: 213 -LVLNLAISFIGANISWQGHLGGLVTG 238
>gi|240280564|gb|EER44068.1| rhomboid protein [Ajellomyces capsulatus H143]
Length = 831
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 22 IPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVL 81
+P F+ V+ V +++ + +D +PS +YR T H L H +
Sbjct: 22 LPLFSRVVIFVIAVFWVLGIQSLWDVVQWGALIPSET-GFGSLYRLNTYPFIHNGLFHTI 80
Query: 82 FNMLALVPLGSELERIMGSVRMFYITI-LLATSNAILHLLIALLVAHIPFYRLQNVMDEC 140
+N+LAL PL E G++ + I L+T A L+LL F ++ +
Sbjct: 81 WNVLALTPLLERFEAEHGTLTSVALFIGPLSTLPAGLYLL---------FEKVILRGNTT 131
Query: 141 AIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCG 200
A+G S G++ IP PL L++L L+ N SLLGHL G
Sbjct: 132 ALG---------------------SSIGIYRIPTWTTPLFLIILVFALIPNTSLLGHLSG 170
Query: 201 ILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFI 241
+ G+ + G+ L+P IE L+ R P ++
Sbjct: 171 LAVGYIFGLGYLKFLVPPEKILRWIERK--LNLLARLPHYV 209
>gi|440638426|gb|ELR08345.1| hypothetical protein GMDG_03140 [Geomyces destructans 20631-21]
Length = 269
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 104/233 (44%), Gaps = 20/233 (8%)
Query: 14 RANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVF 73
R + +P FT ++++ +++ + +D +P +YR T +
Sbjct: 15 RTRSYVFRLPLFTRLIIVLIVGFWVVSIQSVWDVRAWGSLIPQET-GVATLYRTNTFPLI 73
Query: 74 HGSLLHVLFNMLALVPLGSELERIMG---SVRMFYITILLATSNAILHLLIALLVAHIPF 130
H L H L N++ALVPL E G S+ +F+ L+T AI+++++ V
Sbjct: 74 HAGLFHALLNVIALVPLLERFETEHGTLTSLLLFFGP--LSTIPAIIYVVLERGVLR--- 128
Query: 131 YRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVF--GLFNIPAKWYPLILLVLFQVL 188
+ +G S +F L+ +E ++ ++ F G N+P PL+L V VL
Sbjct: 129 ------GNTAVLGASLWVFLLLGME-AIKTYRTNPHFKVGTVNVPTWTTPLVLAVFISVL 181
Query: 189 MTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFI 241
+ + S LGHLCG+ G+ + G+ L P +E ++ R P ++
Sbjct: 182 VKHTSFLGHLCGLAVGYLFGLGYLKFLAPPEKILRWVEGK--MNLLGRLPHYV 232
>gi|170576544|ref|XP_001893672.1| MGC84665 protein [Brugia malayi]
gi|158600200|gb|EDP37503.1| MGC84665 protein, putative [Brugia malayi]
Length = 169
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%)
Query: 51 ICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILL 110
+C LPS ++ R + R S + H +H+ FNM++L+ G LE +GS R + +
Sbjct: 1 MCLLPSRILYRCEWLRMLASTIMHVDDMHLYFNMISLLWKGRRLEPWLGSNRFLLLLAVF 60
Query: 111 ATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVI 148
A + + + ++ L + + M++CAIGFSG I
Sbjct: 61 AVATSSTMVGLSYLADEVFSFNGGGYMNQCAIGFSGSI 98
>gi|219363065|ref|NP_001136563.1| putative Rhomboid family protein [Zea mays]
gi|194696188|gb|ACF82178.1| unknown [Zea mays]
gi|195635987|gb|ACG37462.1| rhomboid family protein [Zea mays]
gi|413951669|gb|AFW84318.1| putative Rhomboid family protein [Zea mays]
Length = 275
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 100/202 (49%), Gaps = 8/202 (3%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
+S+V+ +C I+ + G + ++ A + Q +R TS H S++H++FNM
Sbjct: 15 SSSVIGICSLIWWLIQKRGI-GYADVGLSYEAAVDSGQYWRVITSAFSHVSVVHLVFNMS 73
Query: 86 ALVPLGS--ELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIG 143
AL LG+ +L +I V +Y+ L L++ I ++++ A+G
Sbjct: 74 ALWSLGAVEQLGQIGLGVE-YYLHYTLVLVVLSGLLVLGFYHVMIQRFKVEYFRRVTAVG 132
Query: 144 FSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILS 203
+S V+F + I + + ++FG+ ++P + P L+ +++ S +GHL GI+
Sbjct: 133 YSCVVFGWMTILAAKQPSSKLNIFGVLSLPISFAPFESLIFTSIMVPQASFIGHLSGIIV 192
Query: 204 GFAYTYGFFNLLMPGTSFYSAI 225
G++ +G L+ G + Y A+
Sbjct: 193 GYSIAWG----LVHGMNNYWAV 210
>gi|389818133|ref|ZP_10208574.1| hypothetical protein A1A1_11051 [Planococcus antarcticus DSM 14505]
gi|388464065|gb|EIM06401.1| hypothetical protein A1A1_11051 [Planococcus antarcticus DSM 14505]
Length = 202
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 74/147 (50%), Gaps = 15/147 (10%)
Query: 59 ISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILH 118
I+ Q +RF+T I HG L+H+LFNM +L G ELER+ G VR + TI L+
Sbjct: 52 IAEGQWWRFFTPIFLHGGLMHLLFNMFSLFLFGPELERLTGKVR--FTTIYLSAG----- 104
Query: 119 LLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYP 178
L A Y LQ +D +G SG IF + +L R++ L I
Sbjct: 105 -----LFASAATYFLQP-LDYAHVGASGAIFGVFGAFGALVYYGGRALPQLKQIILPIIV 158
Query: 179 LILLVLFQVLMTNVSLLGHLCGILSGF 205
+ +++ F L NV++ H+ G+++GF
Sbjct: 159 ISIVMTF--LTPNVNVTAHIAGMITGF 183
>gi|380484641|emb|CCF39867.1| rhomboid protein 2 [Colletotrichum higginsianum]
Length = 203
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 80/170 (47%), Gaps = 13/170 (7%)
Query: 74 HGSLLHVLFNMLALVPLGSELERIMGSVRMFYITI-LLATSNAILHLLIALLVAHIPFYR 132
H + +H + N+LAL PL E G++ + I L+T A+L++LI R
Sbjct: 8 HKNFIHAIMNLLALTPLMERFEAEFGTLTSIALFIGPLSTIPAVLYVLIE---------R 58
Query: 133 LQNVMDECAIGFSGVIFSLIVIET-SLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTN 191
+ +G S +F L+ +E S + ++IP PLIL+++ L+
Sbjct: 59 FLFKGNVGVMGASVWVFLLLGMEAIRTSKTNPQLTIATYSIPMWTTPLILILVVTALVPG 118
Query: 192 VSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFI 241
SLLGHLCG+L G+ + G+ L P +ES L+ R P ++
Sbjct: 119 TSLLGHLCGVLVGYLFGLGYLKFLSPPEKALRWVESK--LNLLGRLPHYV 166
>gi|346326943|gb|EGX96539.1| Peptidase S54, rhomboid [Cordyceps militaris CM01]
Length = 264
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 16/210 (7%)
Query: 12 STRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSI 71
+ +A + +P FT A+V + + L+ L +D +PS V S F +R T
Sbjct: 9 TVKAKGYLLRLPLFTRAIVFIIFFLSLLSLPGFWDVQAWGSLVPSKV-SLFAAHRINTFP 67
Query: 72 VFHGSLLHVLFNMLALVPLGSELERIMG---SVRMFYITILLATSNAILHLLIALLVAHI 128
+ H +LLH + N+ AL PL E G S+ +F+ L T A+L+L+I +
Sbjct: 68 LIHLNLLHAIVNIFALTPLMERFENEYGTLTSLALFFGP--LTTVPAVLYLVIESAILQ- 124
Query: 129 PFYRLQNVMDECAIGFSGVIFSLIVIETSLS-GAQSRSVFGLFNIPAKWYPLILLVLFQV 187
++ +G S +F L+ +E + + + G +IP PL+L +
Sbjct: 125 --------LNNAIMGASIWVFLLLGMEAIRTYRSNPHLIIGTHHIPTWTTPLLLAFVVAA 176
Query: 188 LMTNVSLLGHLCGILSGFAYTYGFFNLLMP 217
L+ + SLLGH+CG+ G+ G+ + P
Sbjct: 177 LVPSSSLLGHICGLGVGYIAGLGYVKYIAP 206
>gi|116621336|ref|YP_823492.1| rhomboid family protein [Candidatus Solibacter usitatus Ellin6076]
gi|116224498|gb|ABJ83207.1| Rhomboid family protein [Candidatus Solibacter usitatus Ellin6076]
Length = 246
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 90/203 (44%), Gaps = 16/203 (7%)
Query: 12 STRANQWWESIPFFTSAVVIVCGTIYLICLLFGY---DSFYEICFLPSAVISRFQVYRFY 68
+ R + ++ S P ++IV ++LI LF D F + P AV+ F +++
Sbjct: 7 TYRRSSFFGSFPPGVKWLLIVNTVVFLITSLFARQFGDDFRLLALAPVAVVQHFAIWQLV 66
Query: 69 TSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHI 128
T + HG + H+LFNMLAL G+ LE G+ + + + + + ++ +
Sbjct: 67 TYLFLHGGITHLLFNMLALWMFGTPLESDWGTRQFLKYYFICGIGAGVCDVAMNAMMGN- 125
Query: 129 PFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKW----YPLILLVL 184
IG SG I+ L++ Q+ + LF I AK+ Y I L L
Sbjct: 126 --------WVTSTIGASGAIYGLLLAYGVCYPDQTVLMGFLFPIKAKYMVMIYAAIELYL 177
Query: 185 FQVLMTNVSLLGHLCGILSGFAY 207
+ +S + HL G++ GF Y
Sbjct: 178 SIGVNNGISNIAHLGGMVVGFVY 200
>gi|302785620|ref|XP_002974581.1| hypothetical protein SELMODRAFT_101862 [Selaginella moellendorffii]
gi|300157476|gb|EFJ24101.1| hypothetical protein SELMODRAFT_101862 [Selaginella moellendorffii]
Length = 272
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 89/195 (45%), Gaps = 20/195 (10%)
Query: 26 TSAVVIVCGTIYLICLL--FGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFN 83
+S ++ +C ++L GY E+ V+ + Q +R TS H S LH++FN
Sbjct: 15 SSCLIALCSAVWLYIQHRSIGYA---EVGMSYETVVLQGQYWRILTSSFSHISFLHLVFN 71
Query: 84 MLALVPLGS-ELERIMGSVRMFYI-------TILLATSNAILHLLIALLVAHIPFYRLQN 135
M AL LG E + +G FY+ + A I HLLI + L+
Sbjct: 72 MSALWSLGMVEGLKGIGLGVTFYVHYTLLLVLLSAALVLGIYHLLIHR-------FNLEL 124
Query: 136 VMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLL 195
A+G+S V+F + I S + +FGL ++P + P LV +++ S L
Sbjct: 125 YKRVSAVGYSCVVFGWMTILASKQPSSKLELFGLLSLPINFAPFESLVFTSIIVPKASFL 184
Query: 196 GHLCGILSGFAYTYG 210
GHL GI+ G+ +G
Sbjct: 185 GHLAGIIVGYLIAWG 199
>gi|418635278|ref|ZP_13197657.1| peptidase, S54 family [Staphylococcus lugdunensis VCU139]
gi|374842000|gb|EHS05452.1| peptidase, S54 family [Staphylococcus lugdunensis VCU139]
Length = 485
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 75/152 (49%), Gaps = 23/152 (15%)
Query: 65 YRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALL 124
YR TS+ H + H+L NML+L G +E I+G ++M IL+++ L
Sbjct: 202 YRLITSMFLHFNFEHILMNMLSLFIFGKIVEAIIGPMKML-----------ILYIISGLF 250
Query: 125 VAHIPFYRLQNVMDECAIGFSGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLIL 181
F L D + G SG IF L I++ +S SR + G I L++
Sbjct: 251 G---NFLSLSFNTDTVSAGASGAIFGLIGAIIVMMIISKVYSRKMIGQLLI-----ALVI 302
Query: 182 LVLFQVLMTNVSLLGHLCGILSGFAYTY-GFF 212
L+ F +L++NV+++ HL G +SG Y G++
Sbjct: 303 LIGFSLLLSNVNIMAHLGGFISGLLLIYIGYY 334
>gi|380024431|ref|XP_003695999.1| PREDICTED: rhomboid domain-containing protein 1-like [Apis florea]
Length = 247
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 80/166 (48%), Gaps = 11/166 (6%)
Query: 50 EICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITIL 109
E+C + F S HGS +H+ +NM++L+ GS LE + ++ + +
Sbjct: 57 EVCISAIKIFKYHDWNSFIISNFEHGSDMHLYYNMVSLILKGSYLEPMYKTMNFIILLTI 116
Query: 110 LATSNAILHL----LIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRS 165
L+ + +++ ++ L +Y +CAIGFS ++F+L VI +
Sbjct: 117 LSFGCSTMYIGLSYVLMQLTGDYGYYV------QCAIGFSAILFALKVIVICEEYDKIHD 170
Query: 166 VFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGF 211
+ GL +P+K + L+L +L+ S +GHL GIL G Y Y F
Sbjct: 171 IGGL-RVPSKIAVWVELILIHLLVPQSSFIGHLGGILIGCLYCYTF 215
>gi|21952847|dbj|BAC06262.1| P0696G06.19 [Oryza sativa Japonica Group]
Length = 685
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 85/172 (49%), Gaps = 7/172 (4%)
Query: 56 SAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLG--SELERIMGSVRMFYITILLATS 113
A + Q +R TS H S++H++FNM AL LG +L +I V +Y+ L
Sbjct: 456 EAAMEGGQYWRIITSAFSHISVVHLVFNMSALWSLGVVEQLGQIGLGVE-YYLHYTLVLV 514
Query: 114 NAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIP 173
L++ I ++++ A+G+S V+F + I + + ++FG+ ++P
Sbjct: 515 VLSGLLVLGFYHVMIQKFKVEYFRRVTAVGYSCVVFGWMTILATKQPSSKLNIFGVLSLP 574
Query: 174 AKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAI 225
+ P L+ +++ S +GHL GI+ G++ +G L+ G + Y AI
Sbjct: 575 ISFAPFESLIFTSIMVPQASFIGHLSGIIVGYSIAWG----LVHGMNNYWAI 622
>gi|449454580|ref|XP_004145032.1| PREDICTED: rhomboid protein 2-like [Cucumis sativus]
gi|449471895|ref|XP_004153438.1| PREDICTED: rhomboid protein 2-like [Cucumis sativus]
gi|449520980|ref|XP_004167510.1| PREDICTED: LOW QUALITY PROTEIN: rhomboid protein 2-like [Cucumis
sativus]
Length = 271
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 80/152 (52%), Gaps = 5/152 (3%)
Query: 65 YRFYTSIVFHGSLLHVLFNMLALVPLGS--ELERI-MGSVRMFYITILLATSNAILHLLI 121
+R TS H S++H++FNM AL LG+ +L I +G + T++L + +L L +
Sbjct: 52 WRIITSAFSHISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGM 111
Query: 122 ALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLIL 181
L+ I ++L+ A+G+S V+F + I + + +FG ++P + P
Sbjct: 112 YHLL--IQKFKLEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFES 169
Query: 182 LVLFQVLMTNVSLLGHLCGILSGFAYTYGFFN 213
L+ +++ S LGHL GI+ G+A +G +
Sbjct: 170 LIFTSIIVPQASFLGHLSGIIVGYAIAWGLIH 201
>gi|361067743|gb|AEW08183.1| Pinus taeda anonymous locus 2_2414_01 genomic sequence
Length = 159
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 64/116 (55%), Gaps = 6/116 (5%)
Query: 94 LERIMGSVRMF-YITILLATSNAILHLLIALLVAHIPF-YRLQNVMDECAIGFSGVIFSL 151
LER+MGS + +LL S+ I+ + +L + Y L + ECA+GFS V+F+L
Sbjct: 1 LERMMGSTEFASMVAVLLGLSHGIVVVTAKVLATFFDYPYPLTS---ECAVGFSAVLFAL 57
Query: 152 IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAY 207
V+ S S + V+G +PA++ L+L Q+ + VS +GHL GI +G Y
Sbjct: 58 KVVLNS-SSSDPTYVYGGVVVPARYAAWAELLLIQMFVPGVSFIGHLSGIFAGILY 112
>gi|307136259|gb|ADN34087.1| rhomboid protein [Cucumis melo subsp. melo]
Length = 271
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 80/152 (52%), Gaps = 5/152 (3%)
Query: 65 YRFYTSIVFHGSLLHVLFNMLALVPLGS--ELERI-MGSVRMFYITILLATSNAILHLLI 121
+R TS H S++H++FNM AL LG+ +L I +G + T++L + +L L +
Sbjct: 52 WRIITSAFSHISVIHLVFNMSALWSLGAVEQLGHIGLGVPYYLHYTLVLVILSGVLVLGM 111
Query: 122 ALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLIL 181
L+ I ++L+ A+G+S V+F + I + + +FG ++P + P
Sbjct: 112 YHLL--IQKFKLEYFRRVTAVGYSCVVFGWMTILSVRQPSSKLDLFGFLSLPISFAPFES 169
Query: 182 LVLFQVLMTNVSLLGHLCGILSGFAYTYGFFN 213
L+ +++ S LGHL GI+ G+A +G +
Sbjct: 170 LIFTSIIVPQASFLGHLSGIIVGYAIAWGLIH 201
>gi|328779994|ref|XP_001122441.2| PREDICTED: rhomboid domain-containing protein 1-like [Apis
mellifera]
Length = 247
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 11/166 (6%)
Query: 50 EICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITIL 109
E+C + F S HGS +H+ +NM++L+ GS LE + ++ + +
Sbjct: 57 EVCISAIKIFKYHDWNSFIISNFEHGSDMHLYYNMVSLILKGSYLEPMYKTMNFVILLTI 116
Query: 110 LATSNAILHL----LIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRS 165
L+ + +++ ++ L +Y +CAIGFS ++F+L VI +
Sbjct: 117 LSFGCSTMYIGLSYVLMQLTGDYGYYV------QCAIGFSSILFALKVIVICEEYDRIHD 170
Query: 166 VFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGF 211
V GL +P+K + L+L +L+ S +GHL GIL G Y Y F
Sbjct: 171 VGGL-RVPSKIAVWVELILIHLLVPQSSFIGHLGGILIGCLYCYTF 215
>gi|67968683|dbj|BAE00700.1| unnamed protein product [Macaca fascicularis]
Length = 232
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 62/133 (46%), Gaps = 3/133 (2%)
Query: 84 MLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIG 143
M +++ G LER +GS + + +++LL+ VA F + CA+G
Sbjct: 1 MASMLWKGIHLERRLGSRWFALVITTFSILTGVVYLLLQFAVAE--FMDEPDFKRSCAVG 58
Query: 144 FSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILS 203
FSGV+F+L V+ ++ G F +P ++ + LV + S GHL GIL
Sbjct: 59 FSGVLFALKVLNNHYCPGGFVNILG-FPVPNRFACWVELVAIHLFSPGTSFAGHLAGILV 117
Query: 204 GFAYTYGFFNLLM 216
G YT G +M
Sbjct: 118 GLMYTQGPLKKMM 130
>gi|388521227|gb|AFK48675.1| unknown [Lotus japonicus]
Length = 271
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 84/167 (50%), Gaps = 11/167 (6%)
Query: 63 QVYRFYTSIVFHGSLLHVLFNMLALVPLG--SELERIMGSVRMF--YITILLATSNAILH 118
Q +R TS H S++H++FNM AL LG +L+ + V + Y +L+ S ++
Sbjct: 50 QHWRIITSAFSHISVIHLVFNMSALWSLGVVEQLDHLGLGVEYYLQYTLVLVILSGVLVL 109
Query: 119 LLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYP 178
+ LL+ ++++ A+G+S V+F + I + + +FG ++P + P
Sbjct: 110 AMYHLLIQR---FKIEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAP 166
Query: 179 LILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAI 225
L+ +++ S LGHL GI+ G+ +G L+ G S Y A+
Sbjct: 167 FESLIFTSIIVPQASFLGHLSGIVVGYTIAWG----LIHGMSNYWAL 209
>gi|452838363|gb|EME40304.1| hypothetical protein DOTSEDRAFT_112179, partial [Dothistroma
septosporum NZE10]
Length = 232
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 87/192 (45%), Gaps = 14/192 (7%)
Query: 52 CFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLA 111
+PS + R +YR T + H + H L N+LALVPL E G++ F IL
Sbjct: 7 ALIPSEINFR-TLYRLNTYPLIHRDIFHYLLNILALVPLLERFESEHGTITTF---ILFT 62
Query: 112 TSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGL-- 169
+L + ++ F+ + A+G S +F L+ E ++ ++ F L
Sbjct: 63 GPFGLLPGGLYTILERFIFH-----FNGAAVGSSVWVFLLLCNE-AMKTYRANPYFQLED 116
Query: 170 FNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSS 229
IP PL L+++ L+ + SLLGHL G +G+ + G+ L P + IE
Sbjct: 117 IKIPTWTTPLFLILVINFLIPHTSLLGHLSGAATGYLWGLGYIRFLAPHDKILTWIEGK- 175
Query: 230 LLSTCIRQPKFI 241
L+ R P ++
Sbjct: 176 -LNLLGRLPHYV 186
>gi|242059531|ref|XP_002458911.1| hypothetical protein SORBIDRAFT_03g042510 [Sorghum bicolor]
gi|241930886|gb|EES04031.1| hypothetical protein SORBIDRAFT_03g042510 [Sorghum bicolor]
Length = 273
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 99/202 (49%), Gaps = 8/202 (3%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
+S+V+ +C I+ + G + ++ A + Q +R TS H S++H++FNM
Sbjct: 15 SSSVIGICSLIWWLIQKRGI-GYADVGLSYEAAVDGGQYWRIITSAFSHISVVHLVFNMS 73
Query: 86 ALVPLG--SELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIG 143
AL LG +L +I V +Y+ L L++ I ++++ A+G
Sbjct: 74 ALWSLGVVEQLGQIGLGVE-YYLHYTLVLVVLSGLLVLGFYHMMIQRFKVEYFRRVTAVG 132
Query: 144 FSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILS 203
+S V+F + I + + ++FG+ ++P + P L+ +++ S +GHL GI+
Sbjct: 133 YSCVVFGWMTILAAKQPSSKLNIFGVLSLPISFAPFESLIFTSIMVPQASFIGHLSGIIV 192
Query: 204 GFAYTYGFFNLLMPGTSFYSAI 225
G++ +G L+ G + Y AI
Sbjct: 193 GYSIAWG----LIHGMNNYWAI 210
>gi|398390255|ref|XP_003848588.1| hypothetical protein MYCGRDRAFT_63728 [Zymoseptoria tritici IPO323]
gi|339468463|gb|EGP83564.1| hypothetical protein MYCGRDRAFT_63728 [Zymoseptoria tritici IPO323]
Length = 270
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 74/171 (43%), Gaps = 11/171 (6%)
Query: 72 VFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFY 131
+ H + H L N++A VPL E G++ F A LL LL + Y
Sbjct: 62 MLHTNFFHYLLNLIAFVPLVERFESEHGTIVTF------ALFTGPFGLLPGLLYTVLERY 115
Query: 132 RLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSV-FGLFNIPAKWYPLILLVLFQVLMT 190
L+ M+ +G S +F L+ E + Q+ IP PL L+V+ VL+
Sbjct: 116 VLR--MNTTVVGASVWVFLLLSNEAIKTYRQNPHFEISDVKIPTWTTPLFLIVVIWVLVP 173
Query: 191 NVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFI 241
SLLGHLCG L G+ + G+ L P +E L+ R P ++
Sbjct: 174 GTSLLGHLCGALVGYLWGLGYIRFLAPHDKILRWVEGK--LNLLGRLPHYV 222
>gi|317123235|ref|YP_004097347.1| rhomboid family protein [Intrasporangium calvum DSM 43043]
gi|315587323|gb|ADU46620.1| Rhomboid family protein [Intrasporangium calvum DSM 43043]
Length = 314
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 89/193 (46%), Gaps = 18/193 (9%)
Query: 20 ESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHG--SL 77
+ P T A++ +C ++L+ + + + F PSA + +RF T++ H SL
Sbjct: 83 DGRPIVTQAIIGICVVVFLVQWV-SPGTTVDYAFAPSA--GWIEPWRFVTAMFLHAPRSL 139
Query: 78 LHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVM 137
LH+ FN+ AL LGS LE +MG R+ + ++ + LL A + L N
Sbjct: 140 LHIGFNLYALFILGSYLEPLMGRARLAALYLISGIGGQVSVLLFA---GNPTIEGLFNGT 196
Query: 138 DEC----AIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVS 193
D +G SG IF L L+ RS G++ + L++ + ++ N+S
Sbjct: 197 DAAWATPVVGASGAIFGLFGALIVLNRHLGRSAAGMYGV------LLINGVLGFVIPNIS 250
Query: 194 LLGHLCGILSGFA 206
HL G ++G A
Sbjct: 251 WQAHLGGFVTGLA 263
>gi|453080943|gb|EMF08993.1| rhomboid protein [Mycosphaerella populorum SO2202]
Length = 269
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 94/223 (42%), Gaps = 15/223 (6%)
Query: 24 FFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRF----QVYRFYTSIVFHGSLLH 79
FF + G + +I +L+ FY + + A+I +YR T + H S+ H
Sbjct: 17 FFLRLPLATRGFLLVIIVLYFVHFFYPLLTIWGALIPDLINLGTLYRLNTFPLIHKSVFH 76
Query: 80 VLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDE 139
+L N+ L+PL E G++ F IL ++ L + F+ ++
Sbjct: 77 LLLNLFTLIPLLERFESEHGTITTF---ILFTGPFGLIPGLAYTFLERYVFH-----LNT 128
Query: 140 CAIGFSGVIFSLIVIET-SLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHL 198
+G S +F L+ E+ L V G F IP P+ +++ L+ SLLGHL
Sbjct: 129 GVVGSSIWVFLLLANESIKLYKTNPEFVLGGFGIPTWLTPIFGILIVWFLVPGTSLLGHL 188
Query: 199 CGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFI 241
CG G+ + G+ L P +E L+ R P ++
Sbjct: 189 CGAAVGYLWGIGWIRFLAPHDKILRWVEGK--LNLLGRLPHYV 229
>gi|336272910|ref|XP_003351210.1| hypothetical protein SMAC_03513 [Sordaria macrospora k-hell]
gi|380092730|emb|CCC09483.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 291
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 107/238 (44%), Gaps = 23/238 (9%)
Query: 12 STRANQWWESIPFFTSAVVIVCGTIYLICLL---FGYDSFYEICFLPSAVISRFQVYRFY 68
+ R + +P FT A V++ +++ L+ + +D +P I +YR
Sbjct: 17 TQRTRAYLLKLPLFTRATVLIIVLTWVLTLVGKSWDWDVKTWGALIPDE-IGIATLYRIN 75
Query: 69 TSIVFHGSLLHVLFNMLALVPLGSELERIMGS---VRMFYITILLATSNAILHLLIALLV 125
T H ++ H + N++A PL E+ G+ V +F+ AT ++++ I +
Sbjct: 76 TFPFIHLNIFHAVLNIIAFTPLLERFEQEHGTLTAVALFFGP--FATIPGLIYVFIERFI 133
Query: 126 AHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGL--FNIPAKWYPLILLV 183
H + +G S +F L+ +E ++ ++ F + +NIP PL+L+V
Sbjct: 134 LH---------ANTPVMGASMWVFLLLGME-AIRTYKTNPYFTISTYNIPTWITPLLLVV 183
Query: 184 LFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFI 241
+ L+ + S LGHL G+L G+ + G+ L P IE L+ R P ++
Sbjct: 184 VTAALLPSSSFLGHLAGLLVGYGFGLGYLKFLAPPEWALRFIEGK--LNLLGRLPHYV 239
>gi|408374818|ref|ZP_11172500.1| hypothetical protein A11A3_12003 [Alcanivorax hongdengensis A-11-3]
gi|407765346|gb|EKF73801.1| hypothetical protein A11A3_12003 [Alcanivorax hongdengensis A-11-3]
Length = 271
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 57/111 (51%), Gaps = 8/111 (7%)
Query: 2 RPNIVSEAGLSTRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISR 61
+PN++S W+ S+ + T AV+ C +YL LFG + + F +A
Sbjct: 73 QPNLLSGG--------WFASMGWVTRAVLFACVVVYLTPYLFGPQVYQALMFPQAAADLT 124
Query: 62 FQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLAT 112
Q +R T ++ H LLH+LFN+L LG +ER S+++ +T++ A
Sbjct: 125 SQPWRLITPMLLHFGLLHILFNLLWWCDLGRMIERFQSSLQLVGVTLVTAV 175
>gi|407697142|ref|YP_006821930.1| peptidase, S54 (Rhomboid) family [Alcanivorax dieselolei B5]
gi|407254480|gb|AFT71587.1| Peptidase, S54 (Rhomboid) family, putative [Alcanivorax dieselolei
B5]
Length = 274
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%)
Query: 18 WWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSL 77
W+ S+ T + +++C +YL L G + + F PS Q +R T ++ H SL
Sbjct: 87 WFRSLGLVTKSGLVLCVLVYLSPFLLGDRLYAALMFPPSLDGLAVQPWRVVTPMLLHMSL 146
Query: 78 LHVLFNMLALVPLGSELERIMGSVRMFYITILLAT 112
LH+LFN+L LG +ER S ++ +IT++ A
Sbjct: 147 LHILFNLLWWCDLGRVIERFQSSFQLLWITLVTAA 181
>gi|420187246|ref|ZP_14693267.1| rhomboid family protein [Staphylococcus epidermidis NIHLM039]
gi|394256225|gb|EJE01158.1| rhomboid family protein [Staphylococcus epidermidis NIHLM039]
Length = 486
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 88/192 (45%), Gaps = 28/192 (14%)
Query: 30 VIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSLLHVLFNM 84
+I+ + +C++ + F ++ L + F V YR +S+ H + H+L NM
Sbjct: 163 LILINIVIWLCMILYLNRFSDVKLLEVGGLVHFNVVHGEWYRLISSMFLHFNFEHILMNM 222
Query: 85 LALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGF 144
L+L G +E I+GS RM I I+ + F L ++G
Sbjct: 223 LSLFIFGKIVESIIGSWRMLIIYIISG--------------LYGNFVSLSFNTTTISVGA 268
Query: 145 SGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGI 201
SG IF L I + LS ++ + G I L++L++F + M+N++++ HL G
Sbjct: 269 SGAIFGLIGSIFVIMYLSKNFNKKMIGQLLI-----ALVVLIVFSLFMSNINIMAHLGGF 323
Query: 202 LSGFAYTY-GFF 212
+SG T G+F
Sbjct: 324 ISGVLITLIGYF 335
>gi|425737376|ref|ZP_18855649.1| hypothetical protein C273_03260 [Staphylococcus massiliensis S46]
gi|425482724|gb|EKU49880.1| hypothetical protein C273_03260 [Staphylococcus massiliensis S46]
Length = 484
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 107/228 (46%), Gaps = 25/228 (10%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSLLHV 80
T ++++ I+ + + ++ F ++ + ++ F V +R TS+ H + H+
Sbjct: 159 TYGLILLNVIIWALINILHHNEFTDLKLIDLGALAHFNVVHGEWHRLITSMFLHLNFEHI 218
Query: 81 LFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDEC 140
LFNML+L G LE I+GS RMF + +L + I+ L+ L A P D
Sbjct: 219 LFNMLSLFIFGKLLESILGSWRMFGVYML----SGIIGNLVTL--AFSP--------DTF 264
Query: 141 AIGFSGVIFSLI--VIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHL 198
++G SG IF LI +I + + F I L+++V+ + ++N+++L H+
Sbjct: 265 SLGASGAIFGLIGSLIACMIISQK----FDQRTIGQLLLALLIMVVISLFISNINVLAHI 320
Query: 199 CGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFILCTGG 246
G+L G T+ + L F+ I ++ ++ + F+ T
Sbjct: 321 GGLLGGVLVTFLGYYFLKDRKLFWIIIACTAFVALLLLIKIFVTQTDN 368
>gi|302759717|ref|XP_002963281.1| hypothetical protein SELMODRAFT_79372 [Selaginella moellendorffii]
gi|300168549|gb|EFJ35152.1| hypothetical protein SELMODRAFT_79372 [Selaginella moellendorffii]
Length = 272
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 88/188 (46%), Gaps = 6/188 (3%)
Query: 26 TSAVVIVCGTIYLICLL--FGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFN 83
+S ++ +C ++L GY E+ V+ + Q +R TS H S LH++FN
Sbjct: 15 SSCLIALCSAVWLYIQHRSIGYA---EVGMSYETVVLQGQYWRILTSSFSHISFLHLVFN 71
Query: 84 MLALVPLGS-ELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAI 142
M AL LG E + +G FY+ L L++ + + + L+ A+
Sbjct: 72 MSALWSLGMVEGLKGIGLGITFYVHYTLLLVLLSAALVLGIYHFLVHRFNLELYKRVSAV 131
Query: 143 GFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGIL 202
G+S V+F + I S + +FGL ++P + P LV +++ S LGHL GI+
Sbjct: 132 GYSCVVFGWMTILASKQPSSKLELFGLLSLPINFAPFESLVFTSIIVPKASFLGHLAGII 191
Query: 203 SGFAYTYG 210
G+ +G
Sbjct: 192 VGYLIAWG 199
>gi|407917313|gb|EKG10630.1| hypothetical protein MPH_12262 [Macrophomina phaseolina MS6]
Length = 288
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 78/172 (45%), Gaps = 13/172 (7%)
Query: 72 VFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFY 131
V H L H LFN+LA+ PL E G++ F L + A L L+ + V
Sbjct: 93 VTHVGLFHTLFNLLAITPLLERFEAEHGTLVSF---ALFSGPFATLPGLLYIAVER---- 145
Query: 132 RLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVF--GLFNIPAKWYPLILLVLFQVLM 189
+ A+ + V L++ ++ ++ F G + IP PLIL+++ L+
Sbjct: 146 --GLLRGNTAVQGASVWVFLLLAAEAMKTHKANPFFSIGPYKIPTWTTPLILILITSFLV 203
Query: 190 TNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFI 241
N SL+GHLCG L G+ + + L P IE+ L+ +R P ++
Sbjct: 204 PNTSLIGHLCGALVGYLWGLNYIKFLAPPEKILRWIETK--LNLLVRLPHYV 253
>gi|255719446|ref|XP_002556003.1| KLTH0H02816p [Lachancea thermotolerans]
gi|238941969|emb|CAR30141.1| KLTH0H02816p [Lachancea thermotolerans CBS 6340]
Length = 284
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 13/205 (6%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T+ +VI IYL+ L+ + I P+A+ + + R + H SL H++ N L
Sbjct: 36 TTGLVIFMSLIYLLSLVVDING--HISLKPNALF-KLDLNRLSLYPLGHLSLTHLVLNSL 92
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
+L + ER G+V + LLA AI++ L+ L F+ V+ FS
Sbjct: 93 SLFGPLTMFERSHGTVHTGVVLNLLAVFTAIVYCLMGSL-----FFSKTEVLGSSGWCFS 147
Query: 146 GVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGF 205
+F+ + + Q R +F F+ P K+ P+++LVL + S GH G+ G+
Sbjct: 148 --LFAYFSFKEATIRPQQR-IFHSFSAPTKYMPVLILVLVTIFFPGSSFWGHFIGMGMGY 204
Query: 206 --AYTYGFFNLLMPGTSFYSAIESS 228
A+ F L+P +S IES
Sbjct: 205 VLAWKENFVGKLVPPSSLIQKIESK 229
>gi|85093939|ref|XP_959792.1| rhomboid protein 2 [Neurospora crassa OR74A]
gi|74615719|sp|Q7S4V5.1|RBD2_NEUCR RecName: Full=Rhomboid protein 2
gi|28921246|gb|EAA30556.1| rhomboid protein 2 [Neurospora crassa OR74A]
Length = 276
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 106/238 (44%), Gaps = 23/238 (9%)
Query: 12 STRANQWWESIPFFTSAVVIVCGTIYLICLL---FGYDSFYEICFLPSAVISRFQVYRFY 68
+ R + +P FT A V++ +++ L+ + +D +P I +YR
Sbjct: 17 TQRTRAYLLKLPLFTRATVLIIVLTWVLTLVGKSWNWDVKTWGALIPDE-IGIATLYRIN 75
Query: 69 TSIVFHGSLLHVLFNMLALVPLGSELERIMG---SVRMFYITILLATSNAILHLLIALLV 125
T H ++ H + N++A PL E G SV +F+ AT ++++ + +
Sbjct: 76 TFPFIHLNIFHTILNIVAFTPLLERFEHEHGTLTSVALFFGP--FATIPGLIYVFVERFI 133
Query: 126 AHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGL--FNIPAKWYPLILLV 183
H + +G S +F L+ +E ++ ++ F + +NIP PL+L+V
Sbjct: 134 LH---------ANTPVMGASMWVFLLLGME-AIRTYKTNPYFTISTYNIPTWITPLLLVV 183
Query: 184 LFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFI 241
+ L+ + S LGHL G+L G+ + G+ L P IE L+ R P ++
Sbjct: 184 VTAALLPSSSFLGHLAGLLVGYGFGLGYLKFLAPPEWALRFIEGK--LNLLGRLPHYV 239
>gi|418411961|ref|ZP_12985227.1| hypothetical protein HMPREF9281_00831 [Staphylococcus epidermidis
BVS058A4]
gi|410891544|gb|EKS39341.1| hypothetical protein HMPREF9281_00831 [Staphylococcus epidermidis
BVS058A4]
Length = 486
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 84/183 (45%), Gaps = 27/183 (14%)
Query: 30 VIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSLLHVLFNM 84
+I+ + +C++ + F ++ L + F V YR +S+ H + H+L NM
Sbjct: 163 LILINIVIWLCMILYLNRFSDVKLLEVGGLVHFNVVHGEWYRLISSMFLHFNFEHILMNM 222
Query: 85 LALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGF 144
L+L G +E I+GS RM I I+ + F L ++G
Sbjct: 223 LSLFIFGKIVESIIGSWRMLIIYIISG--------------LYGNFVSLSFNTTTISVGA 268
Query: 145 SGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGI 201
SG IF L I + LS ++ + G I L++L++F + M+N++++ HL G
Sbjct: 269 SGAIFGLIGSIFVIMYLSKNFNKKMIGQLLI-----ALVVLIVFSLFMSNINIMAHLGGF 323
Query: 202 LSG 204
+SG
Sbjct: 324 ISG 326
>gi|420163079|ref|ZP_14669826.1| rhomboid family protein [Staphylococcus epidermidis NIHLM095]
gi|420167946|ref|ZP_14674598.1| rhomboid family protein [Staphylococcus epidermidis NIHLM087]
gi|394234768|gb|EJD80342.1| rhomboid family protein [Staphylococcus epidermidis NIHLM095]
gi|394237974|gb|EJD83460.1| rhomboid family protein [Staphylococcus epidermidis NIHLM087]
Length = 486
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 84/183 (45%), Gaps = 27/183 (14%)
Query: 30 VIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSLLHVLFNM 84
+I+ + +C++ + F ++ L + F V YR +S+ H + H+L NM
Sbjct: 163 LILINIVIWLCMILYLNRFSDVKLLEVGGLVHFNVVHGEWYRLISSMFLHFNFEHILMNM 222
Query: 85 LALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGF 144
L+L G +E I+GS RM I I+ + F L ++G
Sbjct: 223 LSLFIFGKIVESIIGSWRMLIIYIISG--------------LYGNFVSLSFNTTTISVGA 268
Query: 145 SGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGI 201
SG IF L I + LS ++ + G I L++L++F + M+N++++ HL G
Sbjct: 269 SGAIFGLIGSIFVIMYLSKNFNKKMIGQLLI-----ALVVLIVFSLFMSNINIMAHLGGF 323
Query: 202 LSG 204
+SG
Sbjct: 324 ISG 326
>gi|27468153|ref|NP_764790.1| hypothetical protein SE1235 [Staphylococcus epidermidis ATCC 12228]
gi|57867074|ref|YP_188690.1| rhomboid family protein [Staphylococcus epidermidis RP62A]
gi|251810965|ref|ZP_04825438.1| S54 family peptidase [Staphylococcus epidermidis BCM-HMP0060]
gi|282876025|ref|ZP_06284892.1| peptidase, S54 (rhomboid) family protein [Staphylococcus
epidermidis SK135]
gi|293366490|ref|ZP_06613167.1| rhomboid family protein [Staphylococcus epidermidis
M23864:W2(grey)]
gi|417646984|ref|ZP_12296833.1| peptidase, S54 family [Staphylococcus epidermidis VCU144]
gi|417656060|ref|ZP_12305751.1| peptidase, S54 family [Staphylococcus epidermidis VCU028]
gi|417659640|ref|ZP_12309240.1| peptidase, S54 family [Staphylococcus epidermidis VCU045]
gi|417908746|ref|ZP_12552503.1| peptidase, S54 family [Staphylococcus epidermidis VCU037]
gi|417912278|ref|ZP_12555973.1| peptidase, S54 family [Staphylococcus epidermidis VCU105]
gi|417913747|ref|ZP_12557410.1| peptidase, S54 family [Staphylococcus epidermidis VCU109]
gi|418609437|ref|ZP_13172589.1| peptidase, S54 family [Staphylococcus epidermidis VCU065]
gi|418612797|ref|ZP_13175821.1| peptidase, S54 family [Staphylococcus epidermidis VCU117]
gi|418616300|ref|ZP_13179225.1| peptidase, S54 family [Staphylococcus epidermidis VCU120]
gi|418625262|ref|ZP_13187915.1| peptidase, S54 family [Staphylococcus epidermidis VCU125]
gi|418626366|ref|ZP_13188978.1| peptidase, S54 family [Staphylococcus epidermidis VCU126]
gi|418629382|ref|ZP_13191890.1| peptidase, S54 family [Staphylococcus epidermidis VCU127]
gi|418665219|ref|ZP_13226669.1| peptidase, S54 family [Staphylococcus epidermidis VCU081]
gi|419771673|ref|ZP_14297719.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-K]
gi|420165544|ref|ZP_14672235.1| rhomboid family protein [Staphylococcus epidermidis NIHLM088]
gi|420170258|ref|ZP_14676819.1| rhomboid family protein [Staphylococcus epidermidis NIHLM070]
gi|420183211|ref|ZP_14689344.1| rhomboid family protein [Staphylococcus epidermidis NIHLM049]
gi|420194847|ref|ZP_14700644.1| rhomboid family protein [Staphylococcus epidermidis NIHLM021]
gi|420197429|ref|ZP_14703153.1| rhomboid family protein [Staphylococcus epidermidis NIHLM020]
gi|420201679|ref|ZP_14707289.1| rhomboid family protein [Staphylococcus epidermidis NIHLM018]
gi|420206132|ref|ZP_14711642.1| rhomboid family protein [Staphylococcus epidermidis NIHLM008]
gi|420209055|ref|ZP_14714493.1| rhomboid family protein [Staphylococcus epidermidis NIHLM003]
gi|420214009|ref|ZP_14719289.1| rhomboid family protein [Staphylococcus epidermidis NIH05005]
gi|420221664|ref|ZP_14726591.1| peptidase, S54 family [Staphylococcus epidermidis NIH08001]
gi|420225746|ref|ZP_14730573.1| peptidase, S54 family [Staphylococcus epidermidis NIH06004]
gi|420227336|ref|ZP_14732107.1| peptidase, S54 family [Staphylococcus epidermidis NIH05003]
gi|420229653|ref|ZP_14734358.1| peptidase, S54 family [Staphylococcus epidermidis NIH04003]
gi|420234711|ref|ZP_14739271.1| peptidase, S54 family [Staphylococcus epidermidis NIH051475]
gi|421606956|ref|ZP_16048207.1| rhomboid family protein [Staphylococcus epidermidis AU12-03]
gi|27315699|gb|AAO04834.1|AE016748_68 conserved hypothetical protein [Staphylococcus epidermidis ATCC
12228]
gi|57637732|gb|AAW54520.1| rhomboid family protein [Staphylococcus epidermidis RP62A]
gi|251805475|gb|EES58132.1| S54 family peptidase [Staphylococcus epidermidis BCM-HMP0060]
gi|281295050|gb|EFA87577.1| peptidase, S54 (rhomboid) family protein [Staphylococcus
epidermidis SK135]
gi|291319259|gb|EFE59628.1| rhomboid family protein [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329725333|gb|EGG61816.1| peptidase, S54 family [Staphylococcus epidermidis VCU144]
gi|329735277|gb|EGG71569.1| peptidase, S54 family [Staphylococcus epidermidis VCU045]
gi|329737310|gb|EGG73564.1| peptidase, S54 family [Staphylococcus epidermidis VCU028]
gi|341651289|gb|EGS75094.1| peptidase, S54 family [Staphylococcus epidermidis VCU105]
gi|341654769|gb|EGS78507.1| peptidase, S54 family [Staphylococcus epidermidis VCU109]
gi|341656107|gb|EGS79830.1| peptidase, S54 family [Staphylococcus epidermidis VCU037]
gi|374407651|gb|EHQ78503.1| peptidase, S54 family [Staphylococcus epidermidis VCU065]
gi|374409194|gb|EHQ79994.1| peptidase, S54 family [Staphylococcus epidermidis VCU081]
gi|374817874|gb|EHR82049.1| peptidase, S54 family [Staphylococcus epidermidis VCU117]
gi|374821126|gb|EHR85193.1| peptidase, S54 family [Staphylococcus epidermidis VCU120]
gi|374825404|gb|EHR89340.1| peptidase, S54 family [Staphylococcus epidermidis VCU125]
gi|374832800|gb|EHR96505.1| peptidase, S54 family [Staphylococcus epidermidis VCU126]
gi|374834085|gb|EHR97745.1| peptidase, S54 family [Staphylococcus epidermidis VCU127]
gi|383360492|gb|EID37887.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-K]
gi|394235345|gb|EJD80917.1| rhomboid family protein [Staphylococcus epidermidis NIHLM088]
gi|394240596|gb|EJD86019.1| rhomboid family protein [Staphylococcus epidermidis NIHLM070]
gi|394249674|gb|EJD94887.1| rhomboid family protein [Staphylococcus epidermidis NIHLM049]
gi|394263907|gb|EJE08628.1| rhomboid family protein [Staphylococcus epidermidis NIHLM021]
gi|394266236|gb|EJE10882.1| rhomboid family protein [Staphylococcus epidermidis NIHLM020]
gi|394271947|gb|EJE16426.1| rhomboid family protein [Staphylococcus epidermidis NIHLM018]
gi|394277971|gb|EJE22288.1| rhomboid family protein [Staphylococcus epidermidis NIHLM008]
gi|394279283|gb|EJE23591.1| rhomboid family protein [Staphylococcus epidermidis NIHLM003]
gi|394283931|gb|EJE28092.1| rhomboid family protein [Staphylococcus epidermidis NIH05005]
gi|394290290|gb|EJE34154.1| peptidase, S54 family [Staphylococcus epidermidis NIH08001]
gi|394293180|gb|EJE36903.1| peptidase, S54 family [Staphylococcus epidermidis NIH06004]
gi|394297267|gb|EJE40870.1| peptidase, S54 family [Staphylococcus epidermidis NIH05003]
gi|394298947|gb|EJE42502.1| peptidase, S54 family [Staphylococcus epidermidis NIH04003]
gi|394303954|gb|EJE47364.1| peptidase, S54 family [Staphylococcus epidermidis NIH051475]
gi|406657425|gb|EKC83813.1| rhomboid family protein [Staphylococcus epidermidis AU12-03]
Length = 486
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 84/183 (45%), Gaps = 27/183 (14%)
Query: 30 VIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSLLHVLFNM 84
+I+ + +C++ + F ++ L + F V YR +S+ H + H+L NM
Sbjct: 163 LILINIVIWLCMILYLNRFSDVKLLEVGGLVHFNVVHGEWYRLISSMFLHFNFEHILMNM 222
Query: 85 LALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGF 144
L+L G +E I+GS RM I I+ + F L ++G
Sbjct: 223 LSLFIFGKIVESIIGSWRMLIIYIISG--------------LYGNFVSLSFNTTTISVGA 268
Query: 145 SGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGI 201
SG IF L I + LS ++ + G I L++L++F + M+N++++ HL G
Sbjct: 269 SGAIFGLIGSIFVIMYLSKNFNKKMIGQLLI-----ALVVLIVFSLFMSNINIMAHLGGF 323
Query: 202 LSG 204
+SG
Sbjct: 324 ISG 326
>gi|219111855|ref|XP_002177679.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410564|gb|EEC50493.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 354
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 135/331 (40%), Gaps = 24/331 (7%)
Query: 20 ESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLH 79
+ P T +++ V YL+ + D + + +P + F++YR TS + +
Sbjct: 30 RNTPVVTRSILTVLVLSYLLSWVI--DPHFAMANIPQFSVFGFEIYRILTSPLVNTRFFS 87
Query: 80 VLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDE 139
+LF L+ G +E MGS + + + +L L+ +L+ ++ Q +
Sbjct: 88 LLFAFLSFTSQGKRMENSMGSTAFGVLCLTMGVLANVLFLVTNVLLYYVSGGE-QAFLFT 146
Query: 140 CAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLC 199
A G ++F +I +E + ++ IP +YPL L +F + + S + +L
Sbjct: 147 AAAGIWLILFGIIAMECVQAPRGTQRPLFFCKIPTIYYPLALFAVFGLFGQSFS-VANLI 205
Query: 200 GILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFILCTGGNPSGYIPTYSGQN 259
+ G+AY +G+ + L P S E ++L+ R ++ +GQ
Sbjct: 206 SMGIGYAYGFGYLDGLKPSAPRISQWE-ETILADWTRNEGWV--------------AGQA 250
Query: 260 TSSSGLFS----GNIWSNLSSWMPQRETSSQPTQDSRFPGRGRTLSSSQSPVHVDSNLQA 315
S +S G+ +S QR ++ + + S G R S +S + D+N A
Sbjct: 251 ILGSDAWSEANGGSASEGMSLPTMQRGSAQRTSAVSEATGSARAGSVFRSGIREDANNAA 310
Query: 316 RLLDNSSPENRSHMIVTETGDRLSDERQPAL 346
+ H + T T R +D R L
Sbjct: 311 DHASLLANAGSGHTLGT-TSRRPTDPRTARL 340
>gi|222619672|gb|EEE55804.1| hypothetical protein OsJ_04394 [Oryza sativa Japonica Group]
Length = 362
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 98/204 (48%), Gaps = 12/204 (5%)
Query: 26 TSAVVIVCGTIYLICLL--FGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFN 83
+S+V+ +C I+ GY ++ A + Q +R TS H S++H++FN
Sbjct: 15 SSSVIGICSLIWFFIQKRNIGYG---DVGLSYEAAMEGGQYWRIITSAFSHISVVHLVFN 71
Query: 84 MLALVPLG--SELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECA 141
M AL LG +L +I V +Y+ L L++ I ++++ A
Sbjct: 72 MSALWSLGVVEQLGQIGLGVE-YYLHYTLVLVVLSGLLVLGFYHVMIQKFKVEYFRRVTA 130
Query: 142 IGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGI 201
+G+S V+F + I + + ++FG+ ++P + P L+ +++ S +GHL GI
Sbjct: 131 VGYSCVVFGWMTILATKQPSSKLNIFGVLSLPISFAPFESLIFTSIMVPQASFIGHLSGI 190
Query: 202 LSGFAYTYGFFNLLMPGTSFYSAI 225
+ G++ +G L+ G + Y AI
Sbjct: 191 IVGYSIAWG----LVHGMNNYWAI 210
>gi|357126318|ref|XP_003564835.1| PREDICTED: rhomboid protein 2-like [Brachypodium distachyon]
Length = 273
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 102/204 (50%), Gaps = 12/204 (5%)
Query: 26 TSAVVIVCGTIYLICLL--FGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFN 83
+S+V+ VC I+ + GY ++ A + Q +R TS H S++H++FN
Sbjct: 15 SSSVIGVCSLIWFLIQKRNIGYA---DVGLSYEAALEGGQYWRIITSAFSHISVVHLVFN 71
Query: 84 MLALVPLGSELERI--MGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECA 141
M AL LG+ +E++ +G +Y+ L L++ + I ++++ A
Sbjct: 72 MSALWSLGA-VEQLGQLGLGVEYYLHYTLVLVVLSGLLVLGIYHVMIQKFKVEYFRRVTA 130
Query: 142 IGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGI 201
+G+S V+F + I + + ++FG+ ++P + P L+ +++ S +GHL GI
Sbjct: 131 VGYSCVVFGWMTILAAKQPSSKLNLFGVLSLPISFAPFESLIFTSIMVPQASFIGHLSGI 190
Query: 202 LSGFAYTYGFFNLLMPGTSFYSAI 225
+ G++ +G L+ G + Y AI
Sbjct: 191 IVGYSIAWG----LIHGMNNYWAI 210
>gi|418605748|ref|ZP_13169055.1| peptidase, S54 family [Staphylococcus epidermidis VCU041]
gi|420220495|ref|ZP_14725454.1| rhomboid family protein [Staphylococcus epidermidis NIH04008]
gi|420232065|ref|ZP_14736707.1| peptidase, S54 family [Staphylococcus epidermidis NIH051668]
gi|374401451|gb|EHQ72524.1| peptidase, S54 family [Staphylococcus epidermidis VCU041]
gi|394285848|gb|EJE29914.1| rhomboid family protein [Staphylococcus epidermidis NIH04008]
gi|394301787|gb|EJE45241.1| peptidase, S54 family [Staphylococcus epidermidis NIH051668]
Length = 486
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 84/183 (45%), Gaps = 27/183 (14%)
Query: 30 VIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSLLHVLFNM 84
+I+ + +C++ + F ++ L + F V YR +S+ H + H+L NM
Sbjct: 163 LILINIVIWLCMILYLNRFSDVKLLEVGGLVHFNVVHGEWYRLISSMFLHFNFEHILMNM 222
Query: 85 LALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGF 144
L+L G +E I+GS RM I I+ + F L ++G
Sbjct: 223 LSLFIFGKIVESIIGSWRMLIIYIISG--------------LYGNFVSLSFNTTTISVGA 268
Query: 145 SGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGI 201
SG IF L I + LS ++ + G I L++L++F + M+N++++ HL G
Sbjct: 269 SGTIFGLIGSIFVIMYLSKNFNKKMIGQLLI-----ALVVLIVFSLFMSNINIMAHLGGF 323
Query: 202 LSG 204
+SG
Sbjct: 324 ISG 326
>gi|420211212|ref|ZP_14716586.1| rhomboid family protein [Staphylococcus epidermidis NIHLM001]
gi|394281665|gb|EJE25891.1| rhomboid family protein [Staphylococcus epidermidis NIHLM001]
Length = 486
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 84/183 (45%), Gaps = 27/183 (14%)
Query: 30 VIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSLLHVLFNM 84
+I+ + +C++ + F ++ L + F V YR +S+ H + H+L NM
Sbjct: 163 LILINIVIWLCMILYLNRFSDVKLLEVGGLVHFNVVHGEWYRLISSMFLHFNFEHILMNM 222
Query: 85 LALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGF 144
L+L G +E I+GS RM I I+ + F L ++G
Sbjct: 223 LSLFIFGKIVESIIGSWRMLIIYIISG--------------LYGNFVSLSFNTTTISVGA 268
Query: 145 SGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGI 201
SG IF L I + LS ++ + G I L++L++F + M+N++++ HL G
Sbjct: 269 SGAIFGLIGSIFVIMYLSKNFNKKMIGQLLI-----ALVVLIVFSLFMSNINIMAHLGGF 323
Query: 202 LSG 204
+SG
Sbjct: 324 ISG 326
>gi|418606637|ref|ZP_13169907.1| peptidase, S54 family [Staphylococcus epidermidis VCU057]
gi|374407413|gb|EHQ78275.1| peptidase, S54 family [Staphylococcus epidermidis VCU057]
Length = 477
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 84/183 (45%), Gaps = 27/183 (14%)
Query: 30 VIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSLLHVLFNM 84
+I+ + +C++ + F ++ L + F V YR +S+ H + H+L NM
Sbjct: 163 LILINIVIWLCMILYLNRFSDVKLLEVGGLVHFNVVHGEWYRLISSMFLHFNFEHILMNM 222
Query: 85 LALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGF 144
L+L G +E I+GS RM I I+ + F L ++G
Sbjct: 223 LSLFIFGKIVESIIGSWRMLIIYIISG--------------LYGNFVSLSFNTTTISVGA 268
Query: 145 SGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGI 201
SG IF L I + LS ++ + G I L++L++F + M+N++++ HL G
Sbjct: 269 SGAIFGLIGSIFVIMYLSKNFNKKMIGQLLI-----ALVVLIVFSLFMSNINIMAHLGGF 323
Query: 202 LSG 204
+SG
Sbjct: 324 ISG 326
>gi|299470170|emb|CBN78198.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 305
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 79/153 (51%), Gaps = 7/153 (4%)
Query: 61 RFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLL 120
R + +R T+ V HG LLH+ F++ +L +E +GS + +L + +L +
Sbjct: 91 RQEWWRVVTAAVAHGGLLHLAFSISSLWSC-RRIETELGS----WGYLLASAHFVVLAEV 145
Query: 121 IALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLI 180
+ H+ R V+DE + G+SGV+F+ IV+ + A +R V G F ++
Sbjct: 146 FEKMFMHV-LLRTGRVVDEVSCGYSGVVFAWIVVLSLRPDAPAR-VIGGFVFSGFASVVL 203
Query: 181 LLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFN 213
LV+ ++L+ S +GHL G+ +G ++ G +
Sbjct: 204 NLVVVRILIRQSSFVGHLAGVWAGLLFSTGALD 236
>gi|348537952|ref|XP_003456456.1| PREDICTED: rhomboid domain-containing protein 1-like [Oreochromis
niloticus]
Length = 298
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 80/176 (45%), Gaps = 16/176 (9%)
Query: 56 SAVISRFQVYR------FYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYI-TI 108
A +S QVYR S + H H+ FNM + + G LER +G Y+ ++
Sbjct: 48 KACMSLDQVYRNKEWRRLLLSPLHHIDDWHLYFNMASFLWKGIRLERRLGGSWFLYLLSV 107
Query: 109 LLATSNAILHLLIALLVAHIP--------FYRLQNVMDECAIGFSGVIFSLIVIETSLSG 160
+ + LL AL++ + +Q ECA+GFSGV+F+L V+ +
Sbjct: 108 FFLLTGLVYLLLQALMIKLMEGTDRSDPLLEYVQAFSRECAVGFSGVLFALKVVNNHFNP 167
Query: 161 AQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLM 216
V + + ++ + LVL ++ SL+GHL G+L G YT G +M
Sbjct: 168 GGVTYVMNI-RVSNRFASWVELVLIYLIAPGTSLVGHLAGVLVGLLYTAGPLKTIM 222
>gi|47221041|emb|CAG12735.1| unnamed protein product [Tetraodon nigroviridis]
Length = 343
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 76/178 (42%), Gaps = 31/178 (17%)
Query: 65 YRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALL 124
+R S + H H+ FNM + + G LER +G Y+ + + +++L++ L
Sbjct: 66 HRLLLSPLHHADDFHLYFNMASFLWKGIRLERRLGGAWFLYLLSVFSVLTGVVYLVLETL 125
Query: 125 VAHIPFYRLQNVMDECAIGFS------------------------GVIFSLIVIETSLSG 160
+A + + Q+ +CA+GFS GV+F+L V+
Sbjct: 126 LAELT--QDQSYSMQCAVGFSGILRNLNCNVYNGYLYIFLFFLFRGVLFALKVLSNHYHP 183
Query: 161 AQSRSVFGL--FNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLM 216
V GL N A W + LVL + SL+GHL GI+ G YT G +M
Sbjct: 184 GGVTYVMGLPVSNRYASW---VELVLIHITAPGTSLIGHLSGIVVGLLYTVGPLKTIM 238
>gi|62182025|ref|YP_218442.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|375116367|ref|ZP_09761537.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SCSA50]
gi|75480205|sp|Q57IV1.1|GLPG_SALCH RecName: Full=Rhomboid protease GlpG; AltName: Full=Intramembrane
serine protease
gi|62129658|gb|AAX67361.1| protein of glp regulon [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|322716513|gb|EFZ08084.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SCSA50]
Length = 276
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 85/193 (44%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T V+I C +Y+ L G + P + +F+V+R++T I H SL+H+LFN+L
Sbjct: 97 TWIVMIACVLVYIAMSLIGDQTVMVWLAWPFDPVLKFEVWRYFTHIFMHFSLMHILFNLL 156
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT++ A + Y Q G S
Sbjct: 157 WWWYLGGAVEKRLGSGKLIVITVVSALLSG---------------YVQQKFSGPWFGGLS 201
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ F + M N +
Sbjct: 202 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALLWIVAGWFD-----WFGMSMANGA--- 253
Query: 197 HLCGILSGFAYTY 209
H+ G++ G A +
Sbjct: 254 HIAGLIVGLAMAF 266
>gi|42522625|ref|NP_968005.1| integral membrane protein [Bdellovibrio bacteriovorus HD100]
gi|426403007|ref|YP_007021978.1| integral membrane protein [Bdellovibrio bacteriovorus str.
Tiberius]
gi|39575157|emb|CAE78998.1| integral membrane protein [Bdellovibrio bacteriovorus HD100]
gi|425859675|gb|AFY00711.1| integral membrane protein [Bdellovibrio bacteriovorus str.
Tiberius]
Length = 244
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 82/160 (51%), Gaps = 12/160 (7%)
Query: 55 PSAVISRFQVYRFYTSIVFHG-SLLHVLFNMLALVPLGSELERIMGSVRMFYITILLA-T 112
P V+ F +++ +T + H + H+LFNML L G+ELE+ GS + F I L+A
Sbjct: 46 PGKVLFDFHIWQPFTYMFLHSMQVTHILFNMLMLWFFGAELEQRWGS-KFFLIYYLVAGV 104
Query: 113 SNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNI 172
AIL+ L + A I Q + +G SG +F L++ + + G + F LF +
Sbjct: 105 GAAILYCLGVWVYALIT--GSQTGLIVPVVGASGAVFGLLLAQGMIFGERIVYFFMLFPM 162
Query: 173 PAKWY-PLILLVLFQVLMT------NVSLLGHLCGILSGF 205
K++ L+ LV LMT V+ L HL GI++GF
Sbjct: 163 KTKYFVALMGLVQLASLMTSSVAGGEVAYLAHLGGIVAGF 202
>gi|225433926|ref|XP_002268743.1| PREDICTED: uncharacterized protein LOC100252469 [Vitis vinifera]
gi|147779771|emb|CAN67998.1| hypothetical protein VITISV_001298 [Vitis vinifera]
gi|297743810|emb|CBI36693.3| unnamed protein product [Vitis vinifera]
Length = 271
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 77/154 (50%), Gaps = 15/154 (9%)
Query: 65 YRFYTSIVFHGSLLHVLFNMLALVPLG--SELERIMGSVRMF--YITILLATSNAIL--- 117
+R TS + H S++H++FNM AL LG +L + V + Y +L+ S ++
Sbjct: 52 WRIITSALSHISVIHLVFNMSALWSLGVVEQLGHMGMGVEFYLQYTLVLVVLSGGLVLGS 111
Query: 118 -HLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKW 176
H+LI ++L+ A+G+S V+F + I + + +FG ++P +
Sbjct: 112 YHVLIQR-------FKLEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLELFGFLSLPISF 164
Query: 177 YPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYG 210
P L+ +++ S LGHL GI+ G+A +G
Sbjct: 165 APFESLIFTSIIVPQASFLGHLSGIIVGYAIAWG 198
>gi|56415432|ref|YP_152507.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|197364362|ref|YP_002143999.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|81361720|sp|Q5PLZ8.1|GLPG_SALPA RecName: Full=Rhomboid protease GlpG; AltName: Full=Intramembrane
serine protease
gi|226729487|sp|B5BHH5.1|GLPG_SALPK RecName: Full=Rhomboid protease GlpG; AltName: Full=Intramembrane
serine protease
gi|56129689|gb|AAV79195.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197095839|emb|CAR61412.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
Length = 276
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 85/193 (44%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T V++ C +Y+ L G + P + +F+V+R++T I H SL+H+LFN+L
Sbjct: 97 TWIVMLACVVVYIAMSLIGDQTVMVWLAWPFDPVLKFEVWRYFTHIFMHFSLMHILFNLL 156
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT++ A + Y Q G S
Sbjct: 157 WWWYLGGAVEKRLGSGKLIVITVISALLSG---------------YVQQKFSGPWFGGLS 201
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ F + M N +
Sbjct: 202 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALLWIVASWFD-----WFGMSMANGA--- 253
Query: 197 HLCGILSGFAYTY 209
H+ G++ G A +
Sbjct: 254 HIAGLIVGLAMAF 266
>gi|229818522|ref|YP_002880048.1| rhomboid family protein [Beutenbergia cavernae DSM 12333]
gi|229564435|gb|ACQ78286.1| Rhomboid family protein [Beutenbergia cavernae DSM 12333]
Length = 315
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 91/207 (43%), Gaps = 28/207 (13%)
Query: 3 PNIVSEAGLSTRANQWWESIPFFTSAVVIVCGTIYLICLLFG--YDSFYEICFLPSAVIS 60
P + G RA + P T ++++C I L+ + Y Y+ SA I
Sbjct: 91 PRTRTPLGGRARAGR-----PVITLTIIVICAAIELLRYVAPGLYSEVYQAMAF-SAAIG 144
Query: 61 RFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLL 120
Q YRF ++ HG LLH+ FNM AL +G LE+++G R + +L A ++ +LL
Sbjct: 145 EVQPYRFLSAAFLHGGLLHLAFNMYALWIVGGFLEQMLGRWRYAALFLLSAIGGSVGYLL 204
Query: 121 IALLVAHIPFYRLQNVMDECAIGFSGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWY 177
+A P R + +G SG +F L IV +G + + L I
Sbjct: 205 LA-----DPLSRAWTIP---VVGASGAVFGLFAAIVFVLRSTGRNASQILVLIAIN---- 252
Query: 178 PLILLVLFQVLMTNVSLLGHLCGILSG 204
V+ ++ ++ HL G+++G
Sbjct: 253 -----VVIGFVVPGIAWQAHLGGMVTG 274
>gi|350568870|ref|ZP_08937268.1| membrane spanning protein [Propionibacterium avidum ATCC 25577]
gi|348661113|gb|EGY77809.1| membrane spanning protein [Propionibacterium avidum ATCC 25577]
Length = 300
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 84/196 (42%), Gaps = 22/196 (11%)
Query: 27 SAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQ----VYRFYTSIVFHG-SLLHVL 81
S V V T+ IC L + + V++ FQ +RF TS+ H S+LH+
Sbjct: 83 SDVPAVTWTLIGICFLVWAGEWVSPQIRDAVVLAPFQGFHEPWRFVTSMFGHALSILHIG 142
Query: 82 FNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECA 141
FNM AL LG LE +G R ++ +L L+A H L N M++
Sbjct: 143 FNMYALWALGRSLEPFLGRARFLAAYLMSGLGGGVLFCLMA--SPHGDGRFLPN-MNDGV 199
Query: 142 IGFSGVIFS----LIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGH 197
+G SG IF L++++ L GA +R + W L + ++ ++ H
Sbjct: 200 VGASGAIFGLFGVLLIVQRRL-GASTRDL---------WIVLAINAALLFFISGIAWQAH 249
Query: 198 LCGILSGFAYTYGFFN 213
L G + G A FF
Sbjct: 250 LGGFIVGLACGVIFFE 265
>gi|398794690|ref|ZP_10554725.1| putative membrane protein [Pantoea sp. YR343]
gi|398208361|gb|EJM95093.1| putative membrane protein [Pantoea sp. YR343]
Length = 275
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 58/109 (53%), Gaps = 4/109 (3%)
Query: 7 SEAGLSTRANQWWESIPF----FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRF 62
+E+GL W SI T +++ C ++++ + G D + P+ F
Sbjct: 74 TESGLRYERTNIWASIRERAGPLTMTIMVACIAVFILMQIVGDDVALDWLAWPADSSQYF 133
Query: 63 QVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLA 111
QV+R+++ + H SLLH+LFN++ LG +E+ +GS ++F I ++ A
Sbjct: 134 QVWRWFSHALLHFSLLHILFNLMWWWYLGGAVEKRLGSGKLFVIMLISA 182
>gi|16762770|ref|NP_458387.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Typhi str. CT18]
gi|29144257|ref|NP_807599.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|81512455|sp|Q8Z229.1|GLPG_SALTI RecName: Full=Rhomboid protease GlpG; AltName: Full=Intramembrane
serine protease
gi|25300035|pir||AE0996 probable membrane protein glpG [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16505076|emb|CAD08097.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29139894|gb|AAO71459.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
Length = 276
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 85/193 (44%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T V++ C +Y+ L G + P + +F+V+R++T I H SL+H+LFN+L
Sbjct: 97 TWIVMLACVVVYIAMSLIGDQTVMVWLAWPFDPVLKFEVWRYFTHIFMHFSLMHILFNLL 156
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT++ A + Y Q G S
Sbjct: 157 WWWYLGGAVEKRLGSGKLIVITVISALLSG---------------YVQQKFSGPWFGGLS 201
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ F + M N +
Sbjct: 202 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALLWIVAGWFD-----WFGMSMANGA--- 253
Query: 197 HLCGILSGFAYTY 209
H+ G++ G A +
Sbjct: 254 HIAGLIVGLAMAF 266
>gi|420216660|ref|ZP_14721861.1| rhomboid family protein, partial [Staphylococcus epidermidis
NIH05001]
gi|394291537|gb|EJE35341.1| rhomboid family protein, partial [Staphylococcus epidermidis
NIH05001]
Length = 326
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 85/187 (45%), Gaps = 27/187 (14%)
Query: 30 VIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSLLHVLFNM 84
+I+ + +C++ + F ++ L + F V YR +S+ H + H+L NM
Sbjct: 3 LILINIVIWLCMILYLNRFSDVKLLEVGGLVHFNVVHGEWYRLISSMFLHFNFEHILMNM 62
Query: 85 LALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGF 144
L+L G +E I+GS RM I I+ + F L ++G
Sbjct: 63 LSLFIFGKIVESIIGSWRMLIIYIISGL--------------YGNFVSLSFNTTTISVGA 108
Query: 145 SGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGI 201
SG IF L I + LS ++ + G I L++L++F + M+N++++ HL G
Sbjct: 109 SGAIFGLIGSIFVIMYLSKNFNKKMIGQLLI-----ALVVLIVFSLFMSNINIMAHLGGF 163
Query: 202 LSGFAYT 208
+SG T
Sbjct: 164 ISGVLIT 170
>gi|242237769|ref|YP_002985950.1| intramembrane serine protease GlpG [Dickeya dadantii Ech703]
gi|242129826|gb|ACS84128.1| Rhomboid protease [Dickeya dadantii Ech703]
Length = 274
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
T V++ +YL+ L+G D + P A R Q++R+++ + H SLLH+LFN+
Sbjct: 97 LTLGVMLATVVVYLLMQLYGVDRMLLVLAFPDAA-HRLQLWRWFSHALMHFSLLHLLFNL 155
Query: 85 LALVPLGSELERIMGSVRMFYITILLAT 112
+ LG +ER++G+ R+ I +L A
Sbjct: 156 MWWWYLGGPVERVLGTRRLCLILLLSAA 183
>gi|213163525|ref|ZP_03349235.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Typhi str. E00-7866]
gi|213426872|ref|ZP_03359622.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213586781|ref|ZP_03368607.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
gi|213615849|ref|ZP_03371675.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
gi|213647824|ref|ZP_03377877.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|213852317|ref|ZP_03381849.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
gi|289829319|ref|ZP_06546931.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Typhi str. E98-3139]
gi|378962168|ref|YP_005219654.1| Rhomboid protease glpG [Salmonella enterica subsp. enterica serovar
Typhi str. P-stx-12]
gi|417329325|ref|ZP_12114210.1| GlpG protein [Salmonella enterica subsp. enterica serovar Adelaide
str. A4-669]
gi|417368782|ref|ZP_12140206.1| GlpG protein [Salmonella enterica subsp. enterica serovar
Hvittingfoss str. A4-620]
gi|417514135|ref|ZP_12178016.1| GlpG protein [Salmonella enterica subsp. enterica serovar
Senftenberg str. A4-543]
gi|418867403|ref|ZP_13421860.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Newport str. CVM 4176]
gi|353565307|gb|EHC31123.1| GlpG protein [Salmonella enterica subsp. enterica serovar Adelaide
str. A4-669]
gi|353585761|gb|EHC45513.1| GlpG protein [Salmonella enterica subsp. enterica serovar
Hvittingfoss str. A4-620]
gi|353634779|gb|EHC81263.1| GlpG protein [Salmonella enterica subsp. enterica serovar
Senftenberg str. A4-543]
gi|374356040|gb|AEZ47801.1| Rhomboid protease glpG [Salmonella enterica subsp. enterica serovar
Typhi str. P-stx-12]
gi|392839243|gb|EJA94785.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Newport str. CVM 4176]
Length = 274
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 85/193 (44%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T V++ C +Y+ L G + P + +F+V+R++T I H SL+H+LFN+L
Sbjct: 95 TWIVMLACVVVYIAMSLIGDQTVMVWLAWPFDPVLKFEVWRYFTHIFMHFSLMHILFNLL 154
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT++ A + Y Q G S
Sbjct: 155 WWWYLGGAVEKRLGSGKLIVITVISALLSG---------------YVQQKFSGPWFGGLS 199
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ F + M N +
Sbjct: 200 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALLWIVAGWFD-----WFGMSMANGA--- 251
Query: 197 HLCGILSGFAYTY 209
H+ G++ G A +
Sbjct: 252 HIAGLIVGLAMAF 264
>gi|449303984|gb|EMC99991.1| hypothetical protein BAUCODRAFT_30429 [Baudoinia compniacensis UAMH
10762]
Length = 286
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 99/233 (42%), Gaps = 17/233 (7%)
Query: 12 STRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSI 71
+ R ++ +P T AV+ + T + + LF + +P I +YR T
Sbjct: 21 ARRIRSYFLRLPLATRAVLFLL-TAFYVAHLFAPALTHWGALIPQE-IRLDTLYRLNTYP 78
Query: 72 VFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYI-TILLATSNAILHLLIALLVAHIPF 130
H ++LH N AL+PL E G+V F + T + T L+ L+ V H
Sbjct: 79 FLHRNILHFALNCFALLPLLERFEAEHGTVVTFILFTGMFGTLPGSLYTLLERYVFH--- 135
Query: 131 YRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGL--FNIPAKWYPLILLVLFQVL 188
++ A+G S +F L+ E ++ +S F L IP P+ +++ L
Sbjct: 136 ------LNGAAVGASVWVFLLLANE-AVKTYRSNPYFELAGVKIPTWTTPIFFILVINFL 188
Query: 189 MTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFI 241
+ + S LGH+CG G+ + G+ L P IE L+ R P ++
Sbjct: 189 VPHTSFLGHMCGAAVGYLWGLGYIRFLAPPDWVLKFIEGK--LNLLGRLPHYV 239
>gi|326529769|dbj|BAK04831.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 274
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 91/190 (47%), Gaps = 3/190 (1%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
+S V+ +C I+ + G + ++ A + Q +R T+ H S++H++FNM
Sbjct: 15 SSGVIALCSLIWFLIQKKGI-GYADVGLSYEAAVEGGQHWRLITAAFSHVSVVHLVFNMS 73
Query: 86 ALVPLGS--ELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIG 143
AL LG+ +L G +Y+ L L++ + I +++ A+G
Sbjct: 74 ALWSLGAVEQLGPQAGLGVQYYLHYTLVLVVLSGLLVLGIYHVMIRRFKVDYFRRVTAVG 133
Query: 144 FSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILS 203
+S V+F + I + + ++FG+ ++P + P L+ +++ S +GHL GI+
Sbjct: 134 YSCVVFGWMTILAAKQPSSKLNLFGVLSLPISFAPFESLIFTSIMVPQASFVGHLSGIIV 193
Query: 204 GFAYTYGFFN 213
G++ +G +
Sbjct: 194 GYSIAWGLIH 203
>gi|343495941|ref|ZP_08734049.1| GlpG protein [Vibrio nigripulchritudo ATCC 27043]
gi|342821993|gb|EGU56755.1| GlpG protein [Vibrio nigripulchritudo ATCC 27043]
Length = 278
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 55/93 (59%)
Query: 30 VIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVP 89
++VCG I+ ++ + E+ P++ F+++R++T + H S+LH++FN+L
Sbjct: 104 MVVCGVIFFAQIIGFERALLELFHFPASSQQAFEIWRWFTHAILHFSVLHIVFNVLWWWQ 163
Query: 90 LGSELERIMGSVRMFYITILLATSNAILHLLIA 122
LG ++ER +GS ++ I ++ A + + ++A
Sbjct: 164 LGGDIERKLGSGKVIQIFLVSAAVSGLGQFIVA 196
>gi|335430608|ref|ZP_08557497.1| rhomboid family protein [Haloplasma contractile SSD-17B]
gi|335431252|ref|ZP_08558135.1| rhomboid family protein [Haloplasma contractile SSD-17B]
gi|334886957|gb|EGM25302.1| rhomboid family protein [Haloplasma contractile SSD-17B]
gi|334887825|gb|EGM26144.1| rhomboid family protein [Haloplasma contractile SSD-17B]
Length = 214
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 75/146 (51%), Gaps = 19/146 (13%)
Query: 63 QVYRFYTSIVFHGSLLHVLFNM-LALVPLGSELERIMGSVRMFYITIL--LATSNAILHL 119
Q YRF T++ HG+ LH+LFNM L+ LG+ LE ++GS R F + L +A+S + +L
Sbjct: 68 QFYRFLTAMFLHGNFLHILFNMFFGLIILGAALEGLIGSTRFFIVYFLTGIASSYGV-YL 126
Query: 120 LIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPL 179
L P Y + G GV+ +IV + +L R + +
Sbjct: 127 LSG------P-YTVTVGASGAIYGILGVLLFMIVFKKTLVPYNDRKLIAQL--------I 171
Query: 180 ILLVLFQVLMTNVSLLGHLCGILSGF 205
IL V+ +++ +SL GHL G+++GF
Sbjct: 172 ILNVILSFVLSGISLEGHLSGLIAGF 197
>gi|71023631|ref|XP_762045.1| hypothetical protein UM05898.1 [Ustilago maydis 521]
gi|46101610|gb|EAK86843.1| hypothetical protein UM05898.1 [Ustilago maydis 521]
Length = 436
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 82/188 (43%), Gaps = 15/188 (7%)
Query: 20 ESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLH 79
IP T ++ I L CLL + F P VI +F ++R +TS + G L
Sbjct: 8 RKIPPVTRYMLGATAAITLPCLLVITSPYRFALFWP-LVIRKFHIHRIFTSFFYGGGGLK 66
Query: 80 VLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDE 139
+LF++ L S+LE R T ++L + + +L + P
Sbjct: 67 LLFDVFLLYRNSSDLELNHFGRRTADYTW------SLLVMGVVILATNYPL--------G 112
Query: 140 CAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLC 199
I F ++ +LI + + S S FG+ N P++W P + L L + S + +
Sbjct: 113 SPIYFGPLLNALIYVWARANPTSSVSFFGMVNCPSRWLPYVYLGLDLLQGGPGSAITNAT 172
Query: 200 GILSGFAY 207
G+L+G+AY
Sbjct: 173 GLLAGYAY 180
>gi|161616563|ref|YP_001590528.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|161365927|gb|ABX69695.1| hypothetical protein SPAB_04379 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 274
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 85/193 (44%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T V++ C +Y+ L G + P + +F+V+R++T I H SL+H+LFN+L
Sbjct: 95 TWIVMLACVLVYIAMSLIGEQTVMVWLAWPFDPVLKFEVWRYFTHIFMHFSLMHILFNLL 154
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT++ A + Y Q G S
Sbjct: 155 WWWYLGGAVEKRLGSGKLIVITVISALLSG---------------YVQQKFSGPWFGGLS 199
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ F + M N +
Sbjct: 200 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALLWIVAGWFD-----WFGMSMANGA--- 251
Query: 197 HLCGILSGFAYTY 209
H+ G++ G A +
Sbjct: 252 HIAGLIVGLAMAF 264
>gi|189194565|ref|XP_001933621.1| rhomboid protein 2 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187979185|gb|EDU45811.1| rhomboid protein 2 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 263
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 81/170 (47%), Gaps = 13/170 (7%)
Query: 63 QVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATS--NAILHLL 120
Q++R + H H++FN+ A+ PL E G++ +T++L T I +
Sbjct: 61 QMHRLNLFPLLHWGFFHMIFNLFAVTPLIERFESEYGTL----VTLVLFTGPFGTIPGGV 116
Query: 121 IALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSV-FGLFNIPAKWYPL 179
LL ++ L++ + +G S +F L+ E + S G + IP PL
Sbjct: 117 YTLLEKYV----LRS--NTAVMGASVWVFLLLSAEVMKQHKTNPSFSVGPYKIPTWTTPL 170
Query: 180 ILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSS 229
IL+VL +L+ VSL+GHLCG G+ + G+ L+P IE+ +
Sbjct: 171 ILIVLTSILVPYVSLVGHLCGAGLGYLWASGYIKFLVPHEKILRWIETKA 220
>gi|167990732|ref|ZP_02571831.1| glp regulon protein [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|168241669|ref|ZP_02666601.1| glp regulon protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|194442211|ref|YP_002042769.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|374978161|ref|ZP_09719504.1| GlpG protein membrane protein of glp regulon [Salmonella enterica
subsp. enterica serovar Typhimurium str. TN061786]
gi|378986119|ref|YP_005249275.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|386593197|ref|YP_006089597.1| GlpG protein (membrane protein of glp regulon) [Salmonella enterica
subsp. enterica serovar Heidelberg str. B182]
gi|417344339|ref|ZP_12124704.1| GlpG protein [Salmonella enterica subsp. enterica serovar Baildon
str. R6-199]
gi|418806717|ref|ZP_13362287.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21550]
gi|418810880|ref|ZP_13366417.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22513]
gi|418824370|ref|ZP_13379733.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22462]
gi|418832349|ref|ZP_13387290.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Newport str. CVM N18486]
gi|418834511|ref|ZP_13389419.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Newport str. CVM N1543]
gi|418839976|ref|ZP_13394807.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21554]
gi|418846045|ref|ZP_13400818.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19443]
gi|418852010|ref|ZP_13406716.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Newport str. CVM 37978]
gi|418853051|ref|ZP_13407746.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19593]
gi|418858010|ref|ZP_13412631.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19470]
gi|418865380|ref|ZP_13419860.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19536]
gi|194400874|gb|ACF61096.1| glp regulon protein [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|205330649|gb|EDZ17413.1| glp regulon protein [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|205338882|gb|EDZ25646.1| glp regulon protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|312914548|dbj|BAJ38522.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|321226575|gb|EFX51625.1| GlpG protein membrane protein of glp regulon [Salmonella enterica
subsp. enterica serovar Typhimurium str. TN061786]
gi|357954290|gb|EHJ80533.1| GlpG protein [Salmonella enterica subsp. enterica serovar Baildon
str. R6-199]
gi|383800238|gb|AFH47320.1| GlpG protein (membrane protein of glp regulon) [Salmonella enterica
subsp. enterica serovar Heidelberg str. B182]
gi|392780566|gb|EJA37218.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22513]
gi|392781875|gb|EJA38513.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21550]
gi|392797498|gb|EJA53804.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Newport str. CVM N18486]
gi|392805454|gb|EJA61585.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Newport str. CVM N1543]
gi|392811270|gb|EJA67280.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19443]
gi|392811766|gb|EJA67766.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21554]
gi|392816217|gb|EJA72147.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Newport str. CVM 37978]
gi|392823227|gb|EJA79029.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22462]
gi|392827598|gb|EJA83300.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19593]
gi|392828662|gb|EJA84354.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19536]
gi|392834348|gb|EJA89954.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19470]
Length = 274
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 87/193 (45%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T V++ C +Y+ L G + P + +F+V+R++T I H SL+H+LFN+L
Sbjct: 95 TWIVMLACVLVYIAMSLIGDQTVMVWLAWPFDPVLKFEVWRYFTHIFMHFSLMHILFNLL 154
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT+ + ALL ++ Q G S
Sbjct: 155 WWWYLGGAVEKRLGSGKLIVITV-----------ISALLSGYVQ----QKFSGPWFGGLS 199
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ F + M N +
Sbjct: 200 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALLWIVAGWFD-----WFGMSMANGA--- 251
Query: 197 HLCGILSGFAYTY 209
H+ G++ G A +
Sbjct: 252 HIAGLIVGLAMAF 264
>gi|16766811|ref|NP_462426.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|194450831|ref|YP_002047548.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|197265408|ref|ZP_03165482.1| glp regulon protein [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|198245689|ref|YP_002217482.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|205354853|ref|YP_002228654.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|207858763|ref|YP_002245414.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|375120996|ref|ZP_09766163.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Dublin str. SD3246]
gi|375125749|ref|ZP_09770913.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Gallinarum str. SG9]
gi|378446899|ref|YP_005234531.1| hypothetical protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|378452370|ref|YP_005239730.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|378701416|ref|YP_005183374.1| hypothetical protein SL1344_3491 [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|378990828|ref|YP_005253992.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
gi|379702784|ref|YP_005244512.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Typhimurium str. ST4/74]
gi|383498162|ref|YP_005398851.1| hypothetical protein UMN798_3827 [Salmonella enterica subsp.
enterica serovar Typhimurium str. 798]
gi|418817593|ref|ZP_13373078.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21538]
gi|418819812|ref|ZP_13375249.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22425]
gi|419730767|ref|ZP_14257702.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41579]
gi|419734931|ref|ZP_14261815.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41563]
gi|419738720|ref|ZP_14265478.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41573]
gi|419743381|ref|ZP_14270046.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41566]
gi|419746533|ref|ZP_14273109.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41565]
gi|421357105|ref|ZP_15807417.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 622731-39]
gi|421361913|ref|ZP_15812169.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639016-6]
gi|421368439|ref|ZP_15818628.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 640631]
gi|421372071|ref|ZP_15822221.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-0424]
gi|421376463|ref|ZP_15826563.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-6]
gi|421380037|ref|ZP_15830101.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 485549-17]
gi|421387040|ref|ZP_15837045.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-22]
gi|421388989|ref|ZP_15838974.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-70]
gi|421393389|ref|ZP_15843334.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-26]
gi|421397461|ref|ZP_15847377.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-37]
gi|421404543|ref|ZP_15854383.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-46]
gi|421408201|ref|ZP_15858001.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-50]
gi|421414209|ref|ZP_15863954.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-1427]
gi|421415689|ref|ZP_15865413.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-2659]
gi|421423330|ref|ZP_15872989.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 78-1757]
gi|421427823|ref|ZP_15877442.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22510-1]
gi|421429638|ref|ZP_15879233.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 8b-1]
gi|421437490|ref|ZP_15887006.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648905 5-18]
gi|421438691|ref|ZP_15888186.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 6-18]
gi|421443366|ref|ZP_15892807.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-3079]
gi|421448352|ref|ZP_15897745.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 58-6482]
gi|421571875|ref|ZP_16017543.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00322]
gi|421575360|ref|ZP_16020973.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00325]
gi|421579003|ref|ZP_16024573.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00326]
gi|421586160|ref|ZP_16031643.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00328]
gi|422027764|ref|ZP_16374089.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm1]
gi|422032805|ref|ZP_16378897.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm2]
gi|427555189|ref|ZP_18929392.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm8]
gi|427572804|ref|ZP_18933998.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm9]
gi|427594192|ref|ZP_18938907.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm3]
gi|427618443|ref|ZP_18943818.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm4]
gi|427642068|ref|ZP_18948676.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm6]
gi|427657793|ref|ZP_18953421.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm10]
gi|427663009|ref|ZP_18958293.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm11]
gi|427678553|ref|ZP_18963200.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm12]
gi|427800923|ref|ZP_18968597.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm5]
gi|436588705|ref|ZP_20511946.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22704]
gi|436676064|ref|ZP_20517652.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE30663]
gi|436802543|ref|ZP_20525448.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS44]
gi|436809869|ref|ZP_20529111.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1882]
gi|436816576|ref|ZP_20533954.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1884]
gi|436831880|ref|ZP_20536375.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1594]
gi|436849514|ref|ZP_20540670.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1566]
gi|436859045|ref|ZP_20547322.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1580]
gi|436862804|ref|ZP_20549380.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1543]
gi|436874076|ref|ZP_20556737.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1441]
gi|436876572|ref|ZP_20557905.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1810]
gi|436886407|ref|ZP_20562836.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1558]
gi|436893371|ref|ZP_20567350.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1018]
gi|436900692|ref|ZP_20571622.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1010]
gi|436913821|ref|ZP_20579023.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1729]
gi|436919041|ref|ZP_20581894.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0895]
gi|436928138|ref|ZP_20587583.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0899]
gi|436936999|ref|ZP_20592294.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1457]
gi|436944245|ref|ZP_20596856.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1747]
gi|436953298|ref|ZP_20601648.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0968]
gi|436963093|ref|ZP_20605716.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1444]
gi|436968748|ref|ZP_20607970.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1445]
gi|436978770|ref|ZP_20612745.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1559]
gi|436995735|ref|ZP_20619435.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1565]
gi|437008609|ref|ZP_20623452.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1808]
gi|437021819|ref|ZP_20628063.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1811]
gi|437032835|ref|ZP_20632178.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0956]
gi|437041338|ref|ZP_20635354.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1455]
gi|437051418|ref|ZP_20641299.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1575]
gi|437056460|ref|ZP_20643868.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1725]
gi|437067704|ref|ZP_20650554.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1745]
gi|437073448|ref|ZP_20653021.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1791]
gi|437080203|ref|ZP_20656939.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1795]
gi|437088952|ref|ZP_20661815.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 576709]
gi|437103766|ref|ZP_20666804.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 635290-58]
gi|437124398|ref|ZP_20673430.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-16]
gi|437131688|ref|ZP_20677521.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-19]
gi|437136636|ref|ZP_20679873.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-2]
gi|437143732|ref|ZP_20684530.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-9]
gi|437154404|ref|ZP_20691142.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629163]
gi|437162448|ref|ZP_20696055.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE15-1]
gi|437166726|ref|ZP_20698180.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_N202]
gi|437178167|ref|ZP_20704513.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_56-3991]
gi|437183212|ref|ZP_20707571.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_76-3618]
gi|437205337|ref|ZP_20712321.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13183-1]
gi|437263038|ref|ZP_20719368.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_81-2490]
gi|437271573|ref|ZP_20723837.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL909]
gi|437275637|ref|ZP_20725982.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL913]
gi|437291346|ref|ZP_20731410.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_69-4941]
gi|437304046|ref|ZP_20733759.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 638970-15]
gi|437324460|ref|ZP_20739718.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 17927]
gi|437339339|ref|ZP_20743992.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS4]
gi|437350533|ref|ZP_20747364.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22558]
gi|437430782|ref|ZP_20755985.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 22-17]
gi|437441794|ref|ZP_20757532.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 40-18]
gi|437464665|ref|ZP_20763742.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 1-1]
gi|437474601|ref|ZP_20766393.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 4-1]
gi|437490855|ref|ZP_20771178.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642046 4-7]
gi|437517959|ref|ZP_20778364.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648898 4-5]
gi|437537331|ref|ZP_20781725.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648899 3-17]
gi|437563341|ref|ZP_20786648.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648900 1-16]
gi|437572700|ref|ZP_20789124.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 1-17]
gi|437590533|ref|ZP_20794447.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 39-2]
gi|437607401|ref|ZP_20800316.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648902 6-8]
gi|437622356|ref|ZP_20804627.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648903 1-6]
gi|437652574|ref|ZP_20810092.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648904 3-6]
gi|437661123|ref|ZP_20812733.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 653049 13-19]
gi|437677498|ref|ZP_20817164.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 8-1]
gi|437692122|ref|ZP_20821050.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 9-7]
gi|437707011|ref|ZP_20825467.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 42-20]
gi|437726821|ref|ZP_20830211.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 16-16]
gi|437779525|ref|ZP_20836392.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 76-2651]
gi|437813905|ref|ZP_20842027.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 33944]
gi|438086738|ref|ZP_20859036.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 81-2625]
gi|438102570|ref|ZP_20864991.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 62-1976]
gi|438113339|ref|ZP_20869514.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 53-407]
gi|445130252|ref|ZP_21381167.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9184]
gi|445147562|ref|ZP_21388244.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Dublin str. SL1438]
gi|445148964|ref|ZP_21388789.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Dublin str. HWS51]
gi|445166868|ref|ZP_21394239.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE8a]
gi|445209808|ref|ZP_21401642.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 20037]
gi|445234292|ref|ZP_21406678.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE10]
gi|445252851|ref|ZP_21409048.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 436]
gi|445334395|ref|ZP_21415146.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 18569]
gi|445345687|ref|ZP_21418289.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13-1]
gi|445359169|ref|ZP_21423036.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. PT23]
gi|81521405|sp|Q8ZLH5.1|GLPG_SALTY RecName: Full=Rhomboid protease GlpG; AltName: Full=Intramembrane
serine protease
gi|226729483|sp|B5FKE3.1|GLPG_SALDC RecName: Full=Rhomboid protease GlpG; AltName: Full=Intramembrane
serine protease
gi|226729484|sp|B5R383.1|GLPG_SALEP RecName: Full=Rhomboid protease GlpG; AltName: Full=Intramembrane
serine protease
gi|226729485|sp|B5R7J1.1|GLPG_SALG2 RecName: Full=Rhomboid protease GlpG; AltName: Full=Intramembrane
serine protease
gi|226729486|sp|B4TKV0.1|GLPG_SALHS RecName: Full=Rhomboid protease GlpG; AltName: Full=Intramembrane
serine protease
gi|257096630|sp|B4SVM1.2|GLPG_SALNS RecName: Full=Rhomboid protease GlpG; AltName: Full=Intramembrane
serine protease
gi|16422083|gb|AAL22385.1| protein of glp regulon [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|194409135|gb|ACF69354.1| glp regulon protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|197243663|gb|EDY26283.1| glp regulon protein [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|197940205|gb|ACH77538.1| glp regulon protein [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|205274634|emb|CAR39688.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|206710566|emb|CAR34924.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|261248678|emb|CBG26516.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267995749|gb|ACY90634.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301160065|emb|CBW19585.1| hypothetical membrane protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|323131883|gb|ADX19313.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Typhimurium str. ST4/74]
gi|326625263|gb|EGE31608.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Dublin str. SD3246]
gi|326629999|gb|EGE36342.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Gallinarum str. SG9]
gi|332990375|gb|AEF09358.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
gi|380464983|gb|AFD60386.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. 798]
gi|381293157|gb|EIC34329.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41579]
gi|381295752|gb|EIC36861.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41563]
gi|381301800|gb|EIC42852.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41573]
gi|381311866|gb|EIC52676.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41566]
gi|381320816|gb|EIC61344.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41565]
gi|392787586|gb|EJA44125.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21538]
gi|392793737|gb|EJA50172.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22425]
gi|395984679|gb|EJH93857.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 640631]
gi|395991746|gb|EJI00868.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639016-6]
gi|395991961|gb|EJI01082.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 622731-39]
gi|396001020|gb|EJI10033.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-0424]
gi|396001827|gb|EJI10838.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-6]
gi|396005102|gb|EJI14082.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 485549-17]
gi|396010180|gb|EJI19093.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-22]
gi|396018125|gb|EJI26988.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-26]
gi|396019033|gb|EJI27893.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-70]
gi|396025476|gb|EJI34252.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-46]
gi|396028709|gb|EJI37468.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-50]
gi|396033971|gb|EJI42675.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-37]
gi|396036815|gb|EJI45470.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-1427]
gi|396037419|gb|EJI46068.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 78-1757]
gi|396046940|gb|EJI55518.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-2659]
gi|396049628|gb|EJI58166.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648905 5-18]
gi|396051080|gb|EJI59599.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22510-1]
gi|396058017|gb|EJI66485.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 8b-1]
gi|396070048|gb|EJI78377.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-3079]
gi|396072498|gb|EJI80808.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 6-18]
gi|396073006|gb|EJI81312.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 58-6482]
gi|402519430|gb|EJW26792.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00322]
gi|402522400|gb|EJW29724.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00325]
gi|402522974|gb|EJW30293.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00326]
gi|402528885|gb|EJW36134.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00328]
gi|414013386|gb|EKS97272.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm1]
gi|414014531|gb|EKS98373.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm8]
gi|414014963|gb|EKS98796.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm2]
gi|414028282|gb|EKT11476.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm9]
gi|414029503|gb|EKT12661.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm3]
gi|414031966|gb|EKT15000.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm4]
gi|414043026|gb|EKT25545.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm6]
gi|414043365|gb|EKT25873.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm10]
gi|414048539|gb|EKT30787.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm11]
gi|414056396|gb|EKT38227.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm12]
gi|414062917|gb|EKT44144.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm5]
gi|434957315|gb|ELL50968.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS44]
gi|434965929|gb|ELL58827.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1882]
gi|434972373|gb|ELL64839.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1884]
gi|434980646|gb|ELL72566.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22704]
gi|434981731|gb|ELL73593.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1594]
gi|434988140|gb|ELL79741.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1580]
gi|434988887|gb|ELL80471.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1566]
gi|434997363|gb|ELL88604.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1441]
gi|434998059|gb|ELL89281.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1543]
gi|435008964|gb|ELL99764.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE30663]
gi|435010658|gb|ELM01421.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1810]
gi|435012163|gb|ELM02853.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1558]
gi|435019022|gb|ELM09467.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1018]
gi|435021913|gb|ELM12264.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1010]
gi|435023621|gb|ELM13861.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1729]
gi|435030099|gb|ELM20140.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0895]
gi|435034699|gb|ELM24556.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0899]
gi|435036274|gb|ELM26095.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1457]
gi|435040874|gb|ELM30627.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1747]
gi|435047979|gb|ELM37546.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0968]
gi|435049248|gb|ELM38783.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1444]
gi|435059488|gb|ELM48765.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1445]
gi|435062570|gb|ELM51751.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1565]
gi|435067850|gb|ELM56880.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1808]
gi|435068965|gb|ELM57974.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1559]
gi|435077551|gb|ELM66297.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1811]
gi|435078459|gb|ELM67190.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0956]
gi|435086545|gb|ELM75083.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1455]
gi|435092127|gb|ELM80494.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1575]
gi|435095934|gb|ELM84217.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1745]
gi|435097134|gb|ELM85395.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1725]
gi|435108234|gb|ELM96201.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1791]
gi|435113996|gb|ELN01816.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1795]
gi|435115769|gb|ELN03522.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 576709]
gi|435120317|gb|ELN07912.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-16]
gi|435121801|gb|ELN09324.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 635290-58]
gi|435123588|gb|ELN11080.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-19]
gi|435135877|gb|ELN22978.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-2]
gi|435139453|gb|ELN26444.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-9]
gi|435139917|gb|ELN26898.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629163]
gi|435142929|gb|ELN29808.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE15-1]
gi|435152536|gb|ELN39165.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_N202]
gi|435153957|gb|ELN40554.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_56-3991]
gi|435161613|gb|ELN47841.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_81-2490]
gi|435163143|gb|ELN49281.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_76-3618]
gi|435170047|gb|ELN55805.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL909]
gi|435174896|gb|ELN60337.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL913]
gi|435181540|gb|ELN66593.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_69-4941]
gi|435188172|gb|ELN72889.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 638970-15]
gi|435194289|gb|ELN78747.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 17927]
gi|435195611|gb|ELN80001.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS4]
gi|435199190|gb|ELN83310.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 22-17]
gi|435208546|gb|ELN91953.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13183-1]
gi|435211858|gb|ELN94935.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 40-18]
gi|435214379|gb|ELN97186.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22558]
gi|435217236|gb|ELN99678.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 1-1]
gi|435224370|gb|ELO06342.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 4-1]
gi|435227944|gb|ELO09395.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648898 4-5]
gi|435230007|gb|ELO11342.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642046 4-7]
gi|435236906|gb|ELO17620.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648900 1-16]
gi|435239980|gb|ELO20410.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648899 3-17]
gi|435247064|gb|ELO27035.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 1-17]
gi|435254093|gb|ELO33508.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648902 6-8]
gi|435255248|gb|ELO34618.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 39-2]
gi|435255867|gb|ELO35221.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648903 1-6]
gi|435265923|gb|ELO44719.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648904 3-6]
gi|435268566|gb|ELO47146.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 653049 13-19]
gi|435274738|gb|ELO52832.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 8-1]
gi|435280223|gb|ELO57949.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 9-7]
gi|435291401|gb|ELO68221.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 42-20]
gi|435291593|gb|ELO68408.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 16-16]
gi|435295833|gb|ELO72256.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 33944]
gi|435302365|gb|ELO78328.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 76-2651]
gi|435318481|gb|ELO91405.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 81-2625]
gi|435323577|gb|ELO95574.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 62-1976]
gi|435329467|gb|ELP00869.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 53-407]
gi|444844587|gb|ELX69826.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Dublin str. SL1438]
gi|444852061|gb|ELX77143.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9184]
gi|444858259|gb|ELX83245.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Dublin str. HWS51]
gi|444859965|gb|ELX84897.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 20037]
gi|444860792|gb|ELX85698.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE10]
gi|444865935|gb|ELX90692.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE8a]
gi|444875141|gb|ELX99358.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 18569]
gi|444878621|gb|ELY02735.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13-1]
gi|444885554|gb|ELY09339.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. PT23]
gi|444889467|gb|ELY12903.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 436]
Length = 276
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 87/193 (45%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T V++ C +Y+ L G + P + +F+V+R++T I H SL+H+LFN+L
Sbjct: 97 TWIVMLACVLVYIAMSLIGDQTVMVWLAWPFDPVLKFEVWRYFTHIFMHFSLMHILFNLL 156
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT+ + ALL ++ Q G S
Sbjct: 157 WWWYLGGAVEKRLGSGKLIVITV-----------ISALLSGYVQ----QKFSGPWFGGLS 201
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ F + M N +
Sbjct: 202 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALLWIVAGWFD-----WFGMSMANGA--- 253
Query: 197 HLCGILSGFAYTY 209
H+ G++ G A +
Sbjct: 254 HIAGLIVGLAMAF 266
>gi|336467427|gb|EGO55591.1| rhomboid protein 2 [Neurospora tetrasperma FGSC 2508]
gi|350287930|gb|EGZ69166.1| rhomboid protein 2 [Neurospora tetrasperma FGSC 2509]
Length = 276
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 105/238 (44%), Gaps = 23/238 (9%)
Query: 12 STRANQWWESIPFFTSAVVIVCGTIYLICLL---FGYDSFYEICFLPSAVISRFQVYRFY 68
+ R + +P FT A V++ +++ + + +D +P I +YR
Sbjct: 17 TQRTRAYLLKLPLFTRATVLIIVLTWVLTWVGKSWNWDVKTWGALIPDE-IGIATLYRIN 75
Query: 69 TSIVFHGSLLHVLFNMLALVPLGSELERIMG---SVRMFYITILLATSNAILHLLIALLV 125
T H ++ H + N++A PL E G SV +F+ AT ++++ I +
Sbjct: 76 TFPFIHLNIFHTILNIVAFTPLLERFEHEHGTLTSVALFFGP--FATIPGLIYVFIERFI 133
Query: 126 AHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGL--FNIPAKWYPLILLV 183
H + +G S +F L+ +E ++ ++ F + +NIP PL+L+V
Sbjct: 134 LH---------ANTPVMGASMWVFLLLGME-AIRTYKTNPYFTISTYNIPTWITPLLLVV 183
Query: 184 LFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFI 241
+ L+ + S LGHL G+L G+ + G+ L P IE L+ R P ++
Sbjct: 184 VTAALLPSSSFLGHLAGLLVGYGFGLGYLKFLAPPEWALRFIEGK--LNLLGRLPHYV 239
>gi|330935015|ref|XP_003304798.1| hypothetical protein PTT_17474 [Pyrenophora teres f. teres 0-1]
gi|311318454|gb|EFQ87117.1| hypothetical protein PTT_17474 [Pyrenophora teres f. teres 0-1]
Length = 263
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 15/211 (7%)
Query: 22 IPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVL 81
+PF T +V +++ + F + E L + Q++R + H H++
Sbjct: 22 LPFCTKILVAAILGLWIATIPFPW--IREFGGLEPNKMDLTQMHRLNLFPLLHWGFFHMI 79
Query: 82 FNMLALVPLGSELERIMGSVRMFYITILLATS--NAILHLLIALLVAHIPFYRLQNVMDE 139
FN+ A+ PL E G++ +T++L T I + LL ++ L++ +
Sbjct: 80 FNLFAVTPLIERFESEYGTL----VTLVLFTGPFGTIPGGVYTLLEKYV----LRS--NT 129
Query: 140 CAIGFSGVIFSLIVIETSLSGAQSRSV-FGLFNIPAKWYPLILLVLFQVLMTNVSLLGHL 198
+G S +F L+ E + S G + IP PLIL+VL +L+ VSL+GHL
Sbjct: 130 AVMGASVWVFLLLSAEVMKQHKTNPSFSVGPYKIPTWTTPLILIVLTSILVPYVSLVGHL 189
Query: 199 CGILSGFAYTYGFFNLLMPGTSFYSAIESSS 229
CG G+ + G+ L+P IE+ +
Sbjct: 190 CGAGLGYLWASGYIKFLVPHEKILRWIETKA 220
>gi|378957628|ref|YP_005215115.1| hypothetical protein SPUL_4056 [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|438124662|ref|ZP_20872624.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Pullorum str. ATCC 9120]
gi|357208239|gb|AET56285.1| hypothetical protein SPUL_4056 [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|434942705|gb|ELL48950.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Pullorum str. ATCC 9120]
Length = 276
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 85/193 (44%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T V++ C +Y+ L G + P + +F+V+R++T I H SL+H+LFN+L
Sbjct: 97 TWIVMLACVLVYIAMSLIGDQTVMVWLAWPFDPVLKFEVWRYFTHIFMHFSLMHILFNLL 156
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT++ A + Y Q G S
Sbjct: 157 WWWYLGGAVEKRLGSGKLIVITVISALLSG---------------YVQQKFSGPWFGGLS 201
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ F + M N +
Sbjct: 202 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALLWIVAGWFD-----WFGMSMANGA--- 253
Query: 197 HLCGILSGFAYTY 209
H+ G++ G A +
Sbjct: 254 HIAGLIVGLAMAF 266
>gi|367032382|ref|XP_003665474.1| hypothetical protein MYCTH_2309268 [Myceliophthora thermophila ATCC
42464]
gi|347012745|gb|AEO60229.1| hypothetical protein MYCTH_2309268 [Myceliophthora thermophila ATCC
42464]
Length = 273
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 99/224 (44%), Gaps = 13/224 (5%)
Query: 20 ESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLH 79
+ +P FT +++ + +CL +D L +I+ +YR T + H ++ H
Sbjct: 21 DRLPLFTRLAIVLMVGLEALCLQPWWD-VKAWGRLEPDLINLSTMYRTNTFPLLHVNVFH 79
Query: 80 VLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDE 139
+ N+L +VP+ E G++ LA L + AL+ I + LQ +
Sbjct: 80 LAINLLGVVPMLERFEVEHGTLTS------LALFFGALSTIPALIYVGIERFLLQK--NT 131
Query: 140 CAIGFSGVIFSLIVIETSLSGAQSRSVF--GLFNIPAKWYPLILLVLFQVLMTNVSLLGH 197
IG S F L+ E +S + G IP +P+++L + LM S+LGH
Sbjct: 132 PIIGASIWGFLLLGAEAIRQNKKSPYLVISGQPTIPTWTWPIVMLFVVAPLMPGSSMLGH 191
Query: 198 LCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFI 241
+CG+L G+ + G+ L P IE L+ +R P ++
Sbjct: 192 VCGLLVGYIFGMGYLKFLAPPEWALRFIEGK--LNLRVRLPYYV 233
>gi|197249197|ref|YP_002148447.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|417337000|ref|ZP_12119293.1| GlpG protein [Salmonella enterica subsp. enterica serovar Alachua
str. R6-377]
gi|417393985|ref|ZP_12156309.1| GlpG protein [Salmonella enterica subsp. enterica serovar Minnesota
str. A4-603]
gi|197212900|gb|ACH50297.1| protein of glp regulon [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
gi|353566026|gb|EHC31630.1| GlpG protein [Salmonella enterica subsp. enterica serovar Alachua
str. R6-377]
gi|353607029|gb|EHC61076.1| GlpG protein [Salmonella enterica subsp. enterica serovar Minnesota
str. A4-603]
Length = 274
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 85/193 (44%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T V++ C +Y+ L G + P + +F+V+R++T I H SL+H+LFN+L
Sbjct: 95 TWIVMLACVLVYIAMSLIGDQTVMVWLAWPFDPVLKFEVWRYFTHIFMHFSLMHILFNLL 154
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT++ A + Y Q G S
Sbjct: 155 WWWYLGGAVEKRLGSGKLIVITVISALLSG---------------YVQQKFSGPWFGGLS 199
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ F + M N +
Sbjct: 200 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALLWIVAGWFD-----WFGMSMANGA--- 251
Query: 197 HLCGILSGFAYTY 209
H+ G++ G A +
Sbjct: 252 HIAGLIVGLAMAF 264
>gi|194738360|ref|YP_002116460.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197300666|ref|ZP_03166160.1| protein of glp regulon [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|200387979|ref|ZP_03214591.1| protein of glp regulon [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|205359583|ref|ZP_03224358.1| protein of glp regulon [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|409247204|ref|YP_006887903.1| Rhomboid protease glpG Intramembrane serine protease [Salmonella
enterica subsp. enterica serovar Weltevreden str.
2007-60-3289-1]
gi|417376423|ref|ZP_12145614.1| GlpG protein [Salmonella enterica subsp. enterica serovar Inverness
str. R8-3668]
gi|417521159|ref|ZP_12182916.1| GlpG protein (membrane protein of glp regulon) [Salmonella enterica
subsp. enterica serovar Uganda str. R8-3404]
gi|421883984|ref|ZP_16315204.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Senftenberg str. SS209]
gi|437833834|ref|ZP_20844803.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. SARB17]
gi|440765060|ref|ZP_20944082.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Agona str. SH11G1113]
gi|440769541|ref|ZP_20948498.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Agona str. SH08SF124]
gi|440774970|ref|ZP_20953856.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Agona str. SH10GFN094]
gi|226729491|sp|B4TY77.1|GLPG_SALSV RecName: Full=Rhomboid protease GlpG; AltName: Full=Intramembrane
serine protease
gi|257096629|sp|B5F8P0.2|GLPG_SALA4 RecName: Full=Rhomboid protease GlpG; AltName: Full=Intramembrane
serine protease
gi|194713862|gb|ACF93083.1| protein of glp regulon [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197291250|gb|EDY30602.1| protein of glp regulon [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|199605077|gb|EDZ03622.1| protein of glp regulon [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|205344596|gb|EDZ31360.1| protein of glp regulon [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|320087938|emb|CBY97700.1| Rhomboid protease glpG Intramembrane serine protease [Salmonella
enterica subsp. enterica serovar Weltevreden str.
2007-60-3289-1]
gi|353593158|gb|EHC50992.1| GlpG protein [Salmonella enterica subsp. enterica serovar Inverness
str. R8-3668]
gi|353642118|gb|EHC86660.1| GlpG protein (membrane protein of glp regulon) [Salmonella enterica
subsp. enterica serovar Uganda str. R8-3404]
gi|379986457|emb|CCF87477.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Senftenberg str. SS209]
gi|435301670|gb|ELO77670.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. SARB17]
gi|436412334|gb|ELP10277.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Agona str. SH10GFN094]
gi|436414047|gb|ELP11979.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Agona str. SH08SF124]
gi|436414956|gb|ELP12880.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Agona str. SH11G1113]
Length = 276
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 85/193 (44%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T V++ C +Y+ L G + P + +F+V+R++T I H SL+H+LFN+L
Sbjct: 97 TWIVMLACVLVYIAMSLIGDQTVMVWLAWPFDPVLKFEVWRYFTHIFMHFSLMHILFNLL 156
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT++ A + Y Q G S
Sbjct: 157 WWWYLGGAVEKRLGSGKLIVITVISALLSG---------------YVQQKFSGPWFGGLS 201
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ F + M N +
Sbjct: 202 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALLWIVAGWFD-----WFGMSMANGA--- 253
Query: 197 HLCGILSGFAYTY 209
H+ G++ G A +
Sbjct: 254 HIAGLIVGLAMAF 266
>gi|417486048|ref|ZP_12172451.1| GlpG protein [Salmonella enterica subsp. enterica serovar Rubislaw
str. A4-653]
gi|353633429|gb|EHC80237.1| GlpG protein [Salmonella enterica subsp. enterica serovar Rubislaw
str. A4-653]
Length = 274
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 85/193 (44%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T V++ C +Y+ L G + P + +F+V+R++T I H SL+H+LFN+L
Sbjct: 95 TWIVMLACVLVYIAMSLIGDQTVMVWLAWPFDPVLKFEVWRYFTHIFMHFSLMHILFNLL 154
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT++ A + Y Q G S
Sbjct: 155 WWWYLGGAVEKRLGSGKLIVITVISALLSG---------------YVQQKFSGPWFGGLS 199
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ F + M N +
Sbjct: 200 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALMWIVAGWFD-----WFGMSMANGA--- 251
Query: 197 HLCGILSGFAYTY 209
H+ G++ G A +
Sbjct: 252 HIAGLIVGLAMAF 264
>gi|402584901|gb|EJW78842.1| hypothetical protein WUBG_10251 [Wuchereria bancrofti]
Length = 153
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 1/126 (0%)
Query: 22 IPFFTSAVVIVCGTIYLICLLF-GYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHV 80
IP T AV+I I+L F G +C LPS ++ R + R S V H +H+
Sbjct: 28 IPPVTLAVIIFQMAIFLGYFPFLGQHRTEAMCLLPSRILYRSEWLRMLASTVMHVDDMHL 87
Query: 81 LFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDEC 140
FNM++L+ G LE +GS R + + A + + ++ L + + M++C
Sbjct: 88 YFNMISLLWKGRRLEPWLGSNRFLLLLAVFAVATNCTMVGLSYLADEVFSFNGGGYMNQC 147
Query: 141 AIGFSG 146
A+GFSG
Sbjct: 148 AVGFSG 153
>gi|420184523|ref|ZP_14690632.1| rhomboid family protein [Staphylococcus epidermidis NIHLM040]
gi|394257174|gb|EJE02096.1| rhomboid family protein [Staphylococcus epidermidis NIHLM040]
Length = 486
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 83/183 (45%), Gaps = 27/183 (14%)
Query: 30 VIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSLLHVLFNM 84
+I+ + +C++ + F ++ L + F V YR +S+ H + H+L NM
Sbjct: 163 LILINIVIWLCMILYLNRFSDVKLLEVGGLVHFNVVHGEWYRLISSMFLHFNFEHILMNM 222
Query: 85 LALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGF 144
L+L G +E I+GS RM I I+ + F L ++G
Sbjct: 223 LSLFIFGKIVESIIGSWRMLIIYIISG--------------LYGNFVSLSFNTTTISVGA 268
Query: 145 SGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGI 201
SG IF L I + LS ++ + G I L +L++F + M+N++++ HL G
Sbjct: 269 SGAIFGLIGSIFVIMYLSKNFNKKMIGQLLI-----ALFVLIVFSLFMSNINIMAHLGGF 323
Query: 202 LSG 204
+SG
Sbjct: 324 ISG 326
>gi|87310180|ref|ZP_01092312.1| probable glpG protein [Blastopirellula marina DSM 3645]
gi|87287170|gb|EAQ79072.1| probable glpG protein [Blastopirellula marina DSM 3645]
Length = 312
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 76/154 (49%), Gaps = 15/154 (9%)
Query: 55 PSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSN 114
P I QV+R T I HG L+H+ FNM G LER +GS R Y+ ++L
Sbjct: 160 PFVAIEAGQVWRLITPIFPHGGLMHIAFNMYMWYSFGGILERRLGSGR--YLMMVLG--- 214
Query: 115 AILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPA 174
L + + A + N + AIG SGV+F L S + + FG++ +P+
Sbjct: 215 --LAIFGNVAAASASIFITGNASELYAIGISGVLFGLFGFAWVKSTFEPQ--FGIY-LPS 269
Query: 175 KWYPLILLVLFQV----LMTNVSLLGHLCGILSG 204
+ L++++ F + + N++ GH CG+++G
Sbjct: 270 Q-SVLMMMLWFGLCWLGFVGNIANWGHTCGLIAG 302
>gi|418325502|ref|ZP_12936708.1| peptidase, S54 family [Staphylococcus epidermidis VCU071]
gi|365228104|gb|EHM69289.1| peptidase, S54 family [Staphylococcus epidermidis VCU071]
Length = 486
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 83/183 (45%), Gaps = 27/183 (14%)
Query: 30 VIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSLLHVLFNM 84
+I+ + +C++ + F ++ L + F V YR +S+ H + H+L NM
Sbjct: 163 LILINIVIWLCMILYLNRFSDVKLLEVGGLVHFNVVHGEWYRLISSMFLHFNFEHILMNM 222
Query: 85 LALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGF 144
L+L G +E I+GS RM I I+ + F L ++G
Sbjct: 223 LSLFIFGKIVESIIGSWRMLIIYIISG--------------LYGNFVSLSFNTTTISVGA 268
Query: 145 SGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGI 201
SG IF L I + LS ++ + G I L +L++F + M+N++++ HL G
Sbjct: 269 SGAIFGLIGSIFVIMYLSKNFNKKMIGQLLI-----ALFVLIVFSLFMSNINIMAHLGGF 323
Query: 202 LSG 204
+SG
Sbjct: 324 ISG 326
>gi|428173649|gb|EKX42550.1| hypothetical protein GUITHDRAFT_88083, partial [Guillardia theta
CCMP2712]
Length = 241
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 92/190 (48%), Gaps = 15/190 (7%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T++V+ C TI+ + D + ++ V+ Q +R ++ + H +L+H+ FNM
Sbjct: 18 TASVIGTCCTIWYLIWRNRLD-YVDLGSSYRFVVIEKQWWRTLSASLSHINLVHLGFNMF 76
Query: 86 ALVPLGSELERIMGSVRMFYITILLAT-----SNAILHLLIALLVAHIPFYRLQNVMDEC 140
+ L E+I+GS+ T++ NAI H+L+ A + ++
Sbjct: 77 STWQL-RHAEQILGSLEYLRFTLVFLLLSVIFQNAIHHVLLRTPSA-------EYTLNTV 128
Query: 141 AIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCG 200
+GFS V+F+ + + L+ QS F F +P P L+ Q+++ V +GHL G
Sbjct: 129 GVGFSCVVFAWMTWMSLLTSGQSLD-FLFFRVPYNMSPFASLIFTQLMIPRVDFIGHLSG 187
Query: 201 ILSGFAYTYG 210
I++G+ +G
Sbjct: 188 IIAGYWQGWG 197
>gi|356538887|ref|XP_003537932.1| PREDICTED: rhomboid protein 2-like [Glycine max]
Length = 271
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 83/163 (50%), Gaps = 7/163 (4%)
Query: 65 YRFYTSIVFHGSLLHVLFNMLALVPLGSELERI--MGSVRMFYITILLATSNAILHLLIA 122
+R TS H S++H++FNM AL LG +E++ +G +Y+ L L++A
Sbjct: 52 WRIITSAFSHISVIHLVFNMSALWSLGV-VEQLGHLGLGVEYYLQYTLVLVVLSGVLVLA 110
Query: 123 LLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILL 182
+ I ++L+ A+G+S V+F + I + + +FG ++P + P L
Sbjct: 111 MYHLLIERFKLEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESL 170
Query: 183 VLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAI 225
+ +++ S LGHL GI+ G+A +G L+ G S Y A+
Sbjct: 171 IFTSIIVPQASFLGHLSGIVVGYAIAWG----LIHGMSNYWAL 209
>gi|255634698|gb|ACU17711.1| unknown [Glycine max]
Length = 271
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 83/163 (50%), Gaps = 7/163 (4%)
Query: 65 YRFYTSIVFHGSLLHVLFNMLALVPLGSELERI--MGSVRMFYITILLATSNAILHLLIA 122
+R TS H S++H++FNM AL LG +E++ +G +Y+ L L++A
Sbjct: 52 WRIITSAFSHISVIHLVFNMSALWSLGV-VEQLGHLGLGVEYYLQYTLVLVVLSGVLVLA 110
Query: 123 LLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILL 182
+ I ++L+ A+G+S V+F + I + + +FG ++P + P L
Sbjct: 111 MYHLLIERFKLEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESL 170
Query: 183 VLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAI 225
+ +++ S LGHL GI+ G+A +G L+ G S Y A+
Sbjct: 171 IFTSIIVPQASFLGHLSGIVVGYAIAWG----LIHGMSNYWAL 209
>gi|418512025|ref|ZP_13078271.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Pomona str. ATCC 10729]
gi|366084075|gb|EHN47988.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Pomona str. ATCC 10729]
Length = 274
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 85/193 (44%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T V++VC +Y+ L G + P + +F+ +R++T I H SL+H+LFN+L
Sbjct: 95 TWIVMLVCVLVYIAMSLIGDQTVMVWLAWPFDPVLKFEFWRYFTHIFMHFSLMHILFNLL 154
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT++ A + Y Q G S
Sbjct: 155 WWWYLGGAVEKRLGSGKLIVITVISALLSG---------------YVQQKFSGPWFGGLS 199
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ F + M N +
Sbjct: 200 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALLWIVAGWFD-----WFGMSMANGA--- 251
Query: 197 HLCGILSGFAYTY 209
H+ G++ G A +
Sbjct: 252 HIAGLIVGLAMAF 264
>gi|125528698|gb|EAY76812.1| hypothetical protein OsI_04771 [Oryza sativa Indica Group]
Length = 273
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 83/165 (50%), Gaps = 7/165 (4%)
Query: 63 QVYRFYTSIVFHGSLLHVLFNMLALVPLG--SELERIMGSVRMFYITILLATSNAILHLL 120
Q +R TS H S++H++FNM AL LG +L +I V +Y+ L L+
Sbjct: 51 QYWRIITSAFSHISVVHLVFNMSALWSLGVVEQLGQIGLGVE-YYLHYTLVLVVLSGLLV 109
Query: 121 IALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLI 180
+ I ++++ A+G+S V+F + I + + ++FG+ ++P + P
Sbjct: 110 LGFYHVMIQKFKVEYFRRVTAVGYSCVVFGWMTILATKQPSSKLNIFGVLSLPISFAPFE 169
Query: 181 LLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAI 225
L+ +++ S +GHL GI+ G++ +G L+ G + Y AI
Sbjct: 170 SLIFTSIMVPQASFIGHLSGIIVGYSIAWG----LVHGMNNYWAI 210
>gi|418614697|ref|ZP_13177659.1| peptidase, S54 family [Staphylococcus epidermidis VCU118]
gi|374819233|gb|EHR83361.1| peptidase, S54 family [Staphylococcus epidermidis VCU118]
Length = 486
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 83/183 (45%), Gaps = 27/183 (14%)
Query: 30 VIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSLLHVLFNM 84
+I+ + +C++ + F ++ L + F V YR +S+ H + H+L NM
Sbjct: 163 LILINIVIWLCMILYLNRFSDVKLLEVGGLVHFNVVHGEWYRLISSMFLHFNFEHILMNM 222
Query: 85 LALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGF 144
L+L G +E I+GS RM I I+ + F L ++G
Sbjct: 223 LSLFIFGKIVESIIGSWRMLIIYIISG--------------LYGNFVSLSFNTSTISVGA 268
Query: 145 SGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGI 201
SG IF L I + LS ++ + G I L++L+ F + M+N++++ HL G
Sbjct: 269 SGAIFGLIGSIFVIMYLSKNFNKKMIGQLLI-----ALVVLIGFSLFMSNINIMAHLGGF 323
Query: 202 LSG 204
+SG
Sbjct: 324 ISG 326
>gi|357131644|ref|XP_003567446.1| PREDICTED: uncharacterized protein At3g17611-like [Brachypodium
distachyon]
Length = 326
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 75/160 (46%), Gaps = 7/160 (4%)
Query: 50 EICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITIL 109
+ F P +I + RF S+ FH S + NM +L+ G LE MGS F +
Sbjct: 63 RVLFNPHLIIEFGDLRRFLFSVFFHTSEPQFVMNMSSLLWRGGRLEEYMGS---FEFASM 119
Query: 110 LATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGL 169
+A+ + LL + + + GFSGV+ + V+ A +FG+
Sbjct: 120 VASLIGLSQGFTLLLSKGLLLLGDGTAYYQYSSGFSGVLLGMQVLNAR---AGDIVLFGV 176
Query: 170 FNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTY 209
IPAK+ L L L Q L+ V+++G+L GIL+G Y +
Sbjct: 177 C-IPAKYAELAQLFLMQALIHEVNIVGNLSGILAGLTYLW 215
>gi|224585317|ref|YP_002639116.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|224469845|gb|ACN47675.1| hypothetical protein SPC_3593 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
Length = 273
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 35/193 (18%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T V+I C +Y+ L G + F P + +F+V+R++T I H SL+H+LFN+L
Sbjct: 97 TWIVMIACVLVYIAMSLIGDQTVMVWPFDP---VLKFEVWRYFTHIFMHFSLMHILFNLL 153
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT++ A + Y Q G S
Sbjct: 154 WWWYLGGAVEKRLGSGKLIVITVVSALLSG---------------YVQQKFSGPWFGGLS 198
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ F + M N +
Sbjct: 199 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALLWIVAGWFD-----WFGMSMANGA--- 250
Query: 197 HLCGILSGFAYTY 209
H+ G++ G A +
Sbjct: 251 HIAGLIVGLAMAF 263
>gi|356545465|ref|XP_003541163.1| PREDICTED: rhomboid protein 2-like [Glycine max]
Length = 271
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 83/163 (50%), Gaps = 7/163 (4%)
Query: 65 YRFYTSIVFHGSLLHVLFNMLALVPLGSELERI--MGSVRMFYITILLATSNAILHLLIA 122
+R TS H S++H++FNM AL LG +E++ +G +Y+ L L++A
Sbjct: 52 WRIITSAFSHISVIHLVFNMSALWSLGV-VEQLGHLGLGVEYYLQYTLVLVVLSGVLVLA 110
Query: 123 LLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILL 182
+ I ++L+ A+G+S V+F + I + + +FG ++P + P L
Sbjct: 111 MYHLLIQRFKLEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESL 170
Query: 183 VLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAI 225
+ +++ S LGHL GI+ G+A +G L+ G S Y A+
Sbjct: 171 IFTSIIVPQASFLGHLSGIVVGYAIAWG----LIHGMSNYWAL 209
>gi|437912135|ref|ZP_20850297.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 6.0562-1]
gi|435317136|gb|ELO90192.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Enteritidis str. 6.0562-1]
Length = 212
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 85/193 (44%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T V++ C +Y+ L G + P + +F+V+R++T I H SL+H+LFN+L
Sbjct: 33 TWIVMLACVLVYIAMSLIGDQTVMVWLAWPFDPVLKFEVWRYFTHIFMHFSLMHILFNLL 92
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT++ A + Y Q G S
Sbjct: 93 WWWYLGGAVEKRLGSGKLIVITVISALLSG---------------YVQQKFSGPWFGGLS 137
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ F + M N +
Sbjct: 138 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALLWIVAGWFD-----WFGMSMANGA--- 189
Query: 197 HLCGILSGFAYTY 209
H+ G++ G A +
Sbjct: 190 HIAGLIVGLAMAF 202
>gi|295396584|ref|ZP_06806741.1| S54 family peptidase [Brevibacterium mcbrellneri ATCC 49030]
gi|294970599|gb|EFG46517.1| S54 family peptidase [Brevibacterium mcbrellneri ATCC 49030]
Length = 228
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 91/193 (47%), Gaps = 40/193 (20%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHG--SLLHVLFN 83
T + V ++L + G+ + F+P + + +RF T+++ H S HVLFN
Sbjct: 47 TVTIAAVTVLVWLTQFVPGWHVQERLAFVPLWALD--EPWRFATTMLVHSQPSPTHVLFN 104
Query: 84 MLALVPLGSELERIMGSVRMFYITILLA--TSNAILHLLIALLVAHIPFYRLQNVMDECA 141
M+ L+ G+ LER +GSV F +T +L+ +A++ LL +AH PF
Sbjct: 105 MMGLLIFGTFLERALGSV-FFAVTYVLSGVGGSAMVWLLATQGIAH-PF--------ALY 154
Query: 142 IGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAK-----WYPLILLVLFQVLM----TNV 192
+G SG +F L+ G+ +P+K W ++ VL VLM N+
Sbjct: 155 VGASGAVFGLV---------------GVLLVPSKRLDRNWGGVVGFVLLNVLMLFVEPNI 199
Query: 193 SLLGHLCGILSGF 205
+ HL G++ GF
Sbjct: 200 AWEAHLGGLIVGF 212
>gi|452820434|gb|EME27476.1| hypothetical protein Gasu_49270 [Galdieria sulphuraria]
Length = 357
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 95/209 (45%), Gaps = 28/209 (13%)
Query: 51 ICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILL 110
IC + + Q YR + + F+ S + A + LE+++GS+R I +
Sbjct: 72 ICLSFGRIFYKGQAYRVFVAPWFYHSAAEFASSAFAWCFIAGPLEKLLGSLRFLSIVLWF 131
Query: 111 ATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGL- 169
+L++ + L + + ++ ++C +G S V+F+L+V+ A SR F L
Sbjct: 132 VGLTGLLYITLGLFFSKFHW----SLPEDCVLGISNVLFALLVL------AFSRFEFSLA 181
Query: 170 ----FNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAI 225
+P+ +P ++L++ Q ++ + LGHL G+L+G + + ++P I
Sbjct: 182 TLRDLPVPSWSFPWMILIVCQAMIPSSPFLGHLSGVLAGTLFVHQI--SIIPSYRLLLKI 239
Query: 226 ESSSLLSTCIRQPKFILCTGGNPSGYIPT 254
E S L S + + GYIPT
Sbjct: 240 EESPLFSWML-----------HIRGYIPT 257
>gi|445059551|ref|YP_007384955.1| hypothetical protein A284_05970 [Staphylococcus warneri SG1]
gi|443425608|gb|AGC90511.1| hypothetical protein A284_05970 [Staphylococcus warneri SG1]
Length = 484
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 83/188 (44%), Gaps = 27/188 (14%)
Query: 29 VVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSLLHVLFN 83
++I+ I +C++ ++ F +I L + F V YR TS+ H + H+L N
Sbjct: 162 ILIISNVILWLCMILYFNRFSDIKLLDVGGLVHFNVVHGEWYRLVTSMFLHFNFEHILMN 221
Query: 84 MLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIG 143
ML+L G +E ++GS +M I L A + + F L ++G
Sbjct: 222 MLSLYIFGKIVESVLGSWKMLAI------------YLFAGIFGN--FVSLSFNTTTISVG 267
Query: 144 FSGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCG 200
SG IF L I LS + V G I L++L+ + M+N++++ HL G
Sbjct: 268 ASGAIFGLIGSIFAILYLSKTFDKRVIGQLLI-----ALVILIGLSLFMSNINVMAHLGG 322
Query: 201 ILSGFAYT 208
+ G T
Sbjct: 323 FIGGLLIT 330
>gi|420199483|ref|ZP_14705161.1| rhomboid family protein [Staphylococcus epidermidis NIHLM031]
gi|394272265|gb|EJE16734.1| rhomboid family protein [Staphylococcus epidermidis NIHLM031]
Length = 486
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 83/183 (45%), Gaps = 27/183 (14%)
Query: 30 VIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSLLHVLFNM 84
+I+ + +C++ + F ++ L + F V YR +S+ H + H+L NM
Sbjct: 163 LILINIVIWLCMILYLNRFSDVKLLEVGGLVHFNVVHGEWYRLISSMFLHFNFEHILMNM 222
Query: 85 LALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGF 144
L+L G +E I+GS RM I I+ + F L ++G
Sbjct: 223 LSLFIFGKIVESIIGSWRMLIIYIISG--------------LYGNFVSLSFNTSTISVGA 268
Query: 145 SGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGI 201
SG IF L I + LS ++ + G I L++L+ F + M+N++++ HL G
Sbjct: 269 SGAIFGLIGSIFVIMYLSKNFNKKMIGQLLI-----ALVVLIGFSLFMSNINIMAHLGGF 323
Query: 202 LSG 204
+SG
Sbjct: 324 ISG 326
>gi|115441593|ref|NP_001045076.1| Os01g0895500 [Oryza sativa Japonica Group]
gi|57899816|dbj|BAD87561.1| unknown protein [Oryza sativa Japonica Group]
gi|113534607|dbj|BAF06990.1| Os01g0895500 [Oryza sativa Japonica Group]
gi|215686553|dbj|BAG88806.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 273
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 83/165 (50%), Gaps = 7/165 (4%)
Query: 63 QVYRFYTSIVFHGSLLHVLFNMLALVPLG--SELERIMGSVRMFYITILLATSNAILHLL 120
Q +R TS H S++H++FNM AL LG +L +I V +Y+ L L+
Sbjct: 51 QYWRIITSAFSHISVVHLVFNMSALWSLGVVEQLGQIGLGVE-YYLHYTLVLVVLSGLLV 109
Query: 121 IALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLI 180
+ I ++++ A+G+S V+F + I + + ++FG+ ++P + P
Sbjct: 110 LGFYHVMIQKFKVEYFRRVTAVGYSCVVFGWMTILATKQPSSKLNIFGVLSLPISFAPFE 169
Query: 181 LLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAI 225
L+ +++ S +GHL GI+ G++ +G L+ G + Y AI
Sbjct: 170 SLIFTSIMVPQASFIGHLSGIIVGYSIAWG----LVHGMNNYWAI 210
>gi|416125288|ref|ZP_11595886.1| rhomboid family protein [Staphylococcus epidermidis FRI909]
gi|420178246|ref|ZP_14684579.1| rhomboid family protein [Staphylococcus epidermidis NIHLM057]
gi|420180055|ref|ZP_14686315.1| rhomboid family protein [Staphylococcus epidermidis NIHLM053]
gi|319400885|gb|EFV89104.1| rhomboid family protein [Staphylococcus epidermidis FRI909]
gi|394246872|gb|EJD92124.1| rhomboid family protein [Staphylococcus epidermidis NIHLM057]
gi|394251487|gb|EJD96572.1| rhomboid family protein [Staphylococcus epidermidis NIHLM053]
Length = 486
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 83/183 (45%), Gaps = 27/183 (14%)
Query: 30 VIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSLLHVLFNM 84
+I+ + +C++ + F ++ L + F V YR +S+ H + H+L NM
Sbjct: 163 LILINIVIWLCMILYLNRFSDVKLLEVGGLVHFNVVHGEWYRLISSMFLHFNFEHILMNM 222
Query: 85 LALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGF 144
L+L G +E I+GS RM I I+ + F L ++G
Sbjct: 223 LSLFIFGKIVESIIGSWRMLIIYIISG--------------LYGNFVSLSFNTSTISVGA 268
Query: 145 SGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGI 201
SG IF L I + LS ++ + G I L++L+ F + M+N++++ HL G
Sbjct: 269 SGAIFGLIGSIFVIMYLSKNFNKKMIGQLLI-----ALVVLIGFSLFMSNINIMAHLGGF 323
Query: 202 LSG 204
+SG
Sbjct: 324 ISG 326
>gi|281205968|gb|EFA80157.1| hypothetical protein PPL_06979 [Polysphondylium pallidum PN500]
Length = 338
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 71/135 (52%), Gaps = 15/135 (11%)
Query: 70 SIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIP 129
SI H L+H++ N ++L+ L S +E GS R T +L + ++ ++I+ ++
Sbjct: 158 SIFSHSGLIHLVLNCVSLIDLKS-IEETEGSFRYLQYTFMLIITCVVVEIIISKQLSGNG 216
Query: 130 FYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLM 189
Q +MD ++G+SGV+F L+VI T G S + L++ L++ Q+
Sbjct: 217 ----QRLMDVESLGYSGVLFGLLVISTFRYGIMSSARTALYS----------LIITQIFN 262
Query: 190 TNVSLLGHLCGILSG 204
N +GHL GI++G
Sbjct: 263 RNAHFIGHLAGIVAG 277
>gi|398801221|ref|ZP_10560468.1| putative membrane protein [Pantoea sp. GM01]
gi|398092593|gb|EJL83003.1| putative membrane protein [Pantoea sp. GM01]
Length = 275
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 51/87 (58%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
T +++I C ++++ + G D + P+ FQV+R+++ + H SLLH+LFN+
Sbjct: 96 LTMSIMIACIAVFIVMQIVGDDVALDWLAWPADASQYFQVWRWFSHALLHFSLLHILFNL 155
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
+ LG +E+ +G+ ++F I ++ A
Sbjct: 156 MWWWYLGGAVEKRLGTGKLFVIMLISA 182
>gi|242242821|ref|ZP_04797266.1| rhomboid family protein [Staphylococcus epidermidis W23144]
gi|420174687|ref|ZP_14681135.1| rhomboid family protein [Staphylococcus epidermidis NIHLM061]
gi|420192300|ref|ZP_14698160.1| rhomboid family protein [Staphylococcus epidermidis NIHLM023]
gi|242233722|gb|EES36034.1| rhomboid family protein [Staphylococcus epidermidis W23144]
gi|394244591|gb|EJD89926.1| rhomboid family protein [Staphylococcus epidermidis NIHLM061]
gi|394261511|gb|EJE06308.1| rhomboid family protein [Staphylococcus epidermidis NIHLM023]
Length = 486
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 83/183 (45%), Gaps = 27/183 (14%)
Query: 30 VIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSLLHVLFNM 84
+I+ + +C++ + F ++ L + F V YR +S+ H + H+L NM
Sbjct: 163 LILINIVIWLCMILYLNRFSDVKLLEVGGLVHFNVVHGEWYRLISSMFLHFNFEHILMNM 222
Query: 85 LALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGF 144
L+L G +E I+GS RM I I+ + F L ++G
Sbjct: 223 LSLFIFGKIVESIIGSWRMLIIYIISGL--------------YGNFVSLSFNTSTISVGA 268
Query: 145 SGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGI 201
SG IF L I + LS ++ + G I L++L+ F + M+N++++ HL G
Sbjct: 269 SGAIFGLIGSIFVIMYLSKNFNKKMIGQLLI-----ALVVLIGFSLFMSNINIMAHLGGF 323
Query: 202 LSG 204
+SG
Sbjct: 324 ISG 326
>gi|418630551|ref|ZP_13193032.1| peptidase, S54 family [Staphylococcus epidermidis VCU128]
gi|374837741|gb|EHS01304.1| peptidase, S54 family [Staphylococcus epidermidis VCU128]
Length = 486
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 83/183 (45%), Gaps = 27/183 (14%)
Query: 30 VIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSLLHVLFNM 84
+I+ + +C++ + F ++ L + F V YR +S+ H + H+L NM
Sbjct: 163 LILINIVIWLCMILYLNRFSDVKLLEVGGLVHFNVVHGEWYRLISSMFLHFNFEHILMNM 222
Query: 85 LALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGF 144
L+L G +E I+GS RM I I+ + F L ++G
Sbjct: 223 LSLFIFGKIVESIIGSWRMLIIYIISG--------------LYGNFVSLSFNTSTISVGA 268
Query: 145 SGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGI 201
SG IF L I + LS ++ + G I L++L+ F + M+N++++ HL G
Sbjct: 269 SGAIFGLIGSIFVIMYLSKNFNKKMIGQLLI-----ALVVLIGFSLFMSNINIMAHLGGF 323
Query: 202 LSG 204
+SG
Sbjct: 324 ISG 326
>gi|418633195|ref|ZP_13195612.1| peptidase, S54 family [Staphylococcus epidermidis VCU129]
gi|420190163|ref|ZP_14696107.1| rhomboid family protein [Staphylococcus epidermidis NIHLM037]
gi|420204465|ref|ZP_14710023.1| rhomboid family protein [Staphylococcus epidermidis NIHLM015]
gi|374840014|gb|EHS03521.1| peptidase, S54 family [Staphylococcus epidermidis VCU129]
gi|394259054|gb|EJE03924.1| rhomboid family protein [Staphylococcus epidermidis NIHLM037]
gi|394273475|gb|EJE17906.1| rhomboid family protein [Staphylococcus epidermidis NIHLM015]
Length = 486
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 83/183 (45%), Gaps = 27/183 (14%)
Query: 30 VIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSLLHVLFNM 84
+I+ + +C++ + F ++ L + F V YR +S+ H + H+L NM
Sbjct: 163 LILINIVIWLCMILYLNRFSDVKLLEVGGLVHFNVVHGEWYRLISSMFLHFNFEHILMNM 222
Query: 85 LALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGF 144
L+L G +E I+GS RM I I+ + F L ++G
Sbjct: 223 LSLFIFGKIVESIIGSWRMLIIYIISG--------------LYGNFVSLSFNTSTISVGA 268
Query: 145 SGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGI 201
SG IF L I + LS ++ + G I L++L+ F + M+N++++ HL G
Sbjct: 269 SGAIFGLIGSIFVIMYLSKNFNKKMIGQLLI-----ALVVLIGFSLFMSNINIMAHLGGF 323
Query: 202 LSG 204
+SG
Sbjct: 324 ISG 326
>gi|418621400|ref|ZP_13184176.1| peptidase, S54 family [Staphylococcus epidermidis VCU123]
gi|374829344|gb|EHR93148.1| peptidase, S54 family [Staphylococcus epidermidis VCU123]
Length = 394
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 27/187 (14%)
Query: 30 VIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSLLHVLFNM 84
+I+ + +C++ + F ++ L + F V YR +S+ H + H+L NM
Sbjct: 163 LILINIVIWLCMILYLNRFSDVKLLEVGGLVHFNVVHGEWYRLISSMFLHFNFEHILMNM 222
Query: 85 LALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGF 144
L+L G +E I+GS RM I I+ F L ++G
Sbjct: 223 LSLFIFGKIVESIIGSWRMLIIYIISGLYG--------------NFVSLSFNTTTISVGA 268
Query: 145 SGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGI 201
SG IF L I + LS ++ + G I L++L++F + M+N++++ HL G
Sbjct: 269 SGAIFGLIGSIFVIMYLSKNFNKKMIGQLLI-----ALVVLIVFSLFMSNINIMAHLGGF 323
Query: 202 LSGFAYT 208
+SG T
Sbjct: 324 ISGVLIT 330
>gi|167549266|ref|ZP_02343025.1| protein of glp regulon [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA29]
gi|205325503|gb|EDZ13342.1| protein of glp regulon [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA29]
Length = 274
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 84/194 (43%), Gaps = 34/194 (17%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T V++ C +Y+ L G + P + +F+ +R++T I H SL+H+LFN+L
Sbjct: 95 TWIVMLACVLVYIAMSLIGDQTVMVWLAWPFDPVLKFEFWRYFTHIFMHFSLMHILFNLL 154
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT++ A + Y Q G S
Sbjct: 155 WWWYLGGAVEKRLGSGKLIVITVISALLSG---------------YVQQKFSGPWFGGLS 199
Query: 146 GVIFSLIVIETSLSGAQSRS----------VFGLFNIPAKWYPLILLVLFQVLMTNVSLL 195
GV+++L+ L GA+ +F L I A W+ F + M N +
Sbjct: 200 GVVYALMGY-VWLRGARDPQSGIYLQRGLIIFALLWIVAGWFD-----WFGMSMANGA-- 251
Query: 196 GHLCGILSGFAYTY 209
H+ G++ G A +
Sbjct: 252 -HIAGLIVGLAMAF 264
>gi|190348169|gb|EDK40578.2| hypothetical protein PGUG_04676 [Meyerozyma guilliermondii ATCC
6260]
Length = 291
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 102/231 (44%), Gaps = 28/231 (12%)
Query: 54 LPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATS 113
L + I + ++ R + H + H N+++L PL + E++ G+V LLA S
Sbjct: 71 LYAGAIFKLELNRISMYPLAHTGIFHWFVNVISLSPLLARFEKVHGTVYTGITLNLLAVS 130
Query: 114 NAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGL---- 169
A+++ L+A +++ P R++ G S + FS + + +S + +
Sbjct: 131 TALIYSLLAGIIS--PSTRVE--------GLSAICFSFL----EFYALKEQSYYPIAFQW 176
Query: 170 ---FNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIE 226
+ +P K+ ++L++ +L+ N SLLGHL GI SG+ + +L P IE
Sbjct: 177 GDRYRLPTKYSAFVVLIITFILVPNSSLLGHLAGIGSGYLLAENYLKILYPPRKVILFIE 236
Query: 227 SS-----SLLSTCIRQPKFILCTGGNPSGYIPTYSGQNTSSSGLF--SGNI 270
+ LS + + Y+P + +SS F SG++
Sbjct: 237 DKLESLIAKLSPIVVYYREDSAADTRTVAYVPLFGSDAEASSARFESSGHV 287
>gi|42572467|ref|NP_974329.1| rhomboid-like protein 14 [Arabidopsis thaliana]
gi|332642457|gb|AEE75978.1| rhomboid-like protein 14 [Arabidopsis thaliana]
Length = 239
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 68/125 (54%), Gaps = 5/125 (4%)
Query: 84 MLALVPLGSELERIMGSVRMFYIT-ILLATSNAILHLLIALLVAHIPFYRLQNVMDECAI 142
M++L+ G +LE MGS + L+ S + LL L+ + R +E A+
Sbjct: 1 MMSLLWKGIKLETSMGSSEFASMVFTLIGMSQGVTLLLAKSLLLLFDYDRA--YYNEYAV 58
Query: 143 GFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGIL 202
GFSGV+F++ V+ S + S SV+G+ +P K+ L+L Q+ + N S LGHL GIL
Sbjct: 59 GFSGVLFAMKVVLNSQAEDYS-SVYGIL-VPTKYAAWAELILVQMFVPNASFLGHLGGIL 116
Query: 203 SGFAY 207
+G Y
Sbjct: 117 AGIIY 121
>gi|383813799|ref|ZP_09969223.1| intramembrane serine protease GlpG [Serratia sp. M24T3]
gi|383297472|gb|EIC85782.1| intramembrane serine protease GlpG [Serratia sp. M24T3]
Length = 267
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 51/86 (59%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T AV+ +C ++++ ++G + P+ F+++R++T H SLLH+LFN++
Sbjct: 87 TMAVIFICIAVFILQQIYGDQTVMAWLSWPADRSQYFELWRWFTPAFLHFSLLHILFNLM 146
Query: 86 ALVPLGSELERIMGSVRMFYITILLA 111
LG +E+++GS ++F I ++ A
Sbjct: 147 WWWYLGGPVEKLLGSGKLFTIALISA 172
>gi|397612198|gb|EJK61641.1| hypothetical protein THAOC_17833 [Thalassiosira oceanica]
Length = 620
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 40/193 (20%)
Query: 56 SAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELE-RIMGSVRMFYITILLATSN 114
+ ++ + +R T H LH+ FNM+++ LGSE+E ++ SV L
Sbjct: 142 ARIVGEHEWWRGLTGATAHFEPLHIGFNMMSMNTLGSEIEGSLLNSVEFLMWNGALVVYT 201
Query: 115 AILHLLIALLVAHIPFYRLQNVMDEC----------------------AIGFSGVIFSLI 152
++ ++A++ A I + LQ +D C ++G+S V+F+ +
Sbjct: 202 TMI--MMAMVYARIRY--LQRKIDACGNAQPQLQATYEEKQELLRDTSSVGYSAVLFAWM 257
Query: 153 VIETSLSGAQSRSV-------FGLFNIPA------KWYPLILLVLFQVLMTNVSLLGHLC 199
VI T + + F + +P P++ L + Q +M VS +GHL
Sbjct: 258 VISTMERKQPTCPIPFLNDVCFSTYEVPGLPFLRFNLSPIVSLFVCQFIMPRVSFMGHLA 317
Query: 200 GILSGFAYTYGFF 212
GI++GF +G
Sbjct: 318 GIVAGFLLHWGLL 330
>gi|151942556|gb|EDN60902.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|190407719|gb|EDV10984.1| rhomboid protease [Saccharomyces cerevisiae RM11-1a]
gi|207340765|gb|EDZ69014.1| YPL246Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256270648|gb|EEU05813.1| Rbd2p [Saccharomyces cerevisiae JAY291]
gi|259149911|emb|CAY86714.1| Rbd2p [Saccharomyces cerevisiae EC1118]
gi|323302636|gb|EGA56442.1| Rbd2p [Saccharomyces cerevisiae FostersB]
gi|323306904|gb|EGA60188.1| Rbd2p [Saccharomyces cerevisiae FostersO]
gi|323335253|gb|EGA76542.1| Rbd2p [Saccharomyces cerevisiae Vin13]
gi|323346079|gb|EGA80369.1| Rbd2p [Saccharomyces cerevisiae Lalvin QA23]
gi|349581576|dbj|GAA26733.1| K7_Rbd2p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365762680|gb|EHN04213.1| Rbd2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 262
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 92/205 (44%), Gaps = 12/205 (5%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T+ +V+ IYL+ +F ++ P ++ + Q+ R + H SL H+LFN+L
Sbjct: 18 TTGLVVFLTAIYLLSFIFALRE--DLSLAPESLF-KLQMSRLSLYPLIHLSLPHLLFNVL 74
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
A+ + E G+V L A IL+ L+ L+ V+ A G+
Sbjct: 75 AIWAPLNLFEETHGTVYTGVFLNLSALFAGILYCLLGKLL-------YPEVLVAGASGWC 127
Query: 146 GVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGF 205
+F+ + S ++R ++IP + PL+LLV V++ S GH G+ G+
Sbjct: 128 FTLFAYYSFKESQIRPRTRIFRTDYSIPTLYTPLVLLVAIAVVIPGSSFWGHFFGLCVGY 187
Query: 206 A--YTYGFFNLLMPGTSFYSAIESS 228
A Y +FN + P + IE S
Sbjct: 188 AIGYKESWFNKITPPGWIITKIEKS 212
>gi|380510776|ref|ZP_09854183.1| hypothetical protein XsacN4_06161 [Xanthomonas sacchari NCPPB 4393]
Length = 218
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 85/198 (42%), Gaps = 22/198 (11%)
Query: 22 IPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVIS------RFQVYRFYTSIVFHG 75
+P T A++I ++L+ +LFG D+F P FQ+++ T HG
Sbjct: 5 LPPVTQALLIGNVVVFLLQMLFGMDTFSPFMLWPIGAFDAFSPGENFQLWQLLTYGFLHG 64
Query: 76 SLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQN 135
S H+LFNMLAL G LE+ G+ R ++ + LL+ ++ L N
Sbjct: 65 SFSHLLFNMLALYMFGGPLEQTWGNKRFLTYYLVCVVGAGLCQLLVG-------WWMLSN 117
Query: 136 V-MDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAK-------WYPLILLVLFQV 187
+G SG IF L++ L Q R V IP K + L LL+ F
Sbjct: 118 GNAPYPTLGASGGIFGLLLAFGMLFPNQ-RVVLLFPPIPMKARTFVIVFGALELLMGFTG 176
Query: 188 LMTNVSLLGHLCGILSGF 205
V+ HL G+L G+
Sbjct: 177 WQPGVAHFAHLGGMLFGW 194
>gi|224010728|ref|XP_002294321.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220969816|gb|EED88155.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 827
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 83/179 (46%), Gaps = 33/179 (18%)
Query: 65 YRFYTSIVFHGSLLHVLFNMLALVPLGSELER--IMGSV--RMFYITILLATSNAILHLL 120
+R +T H LH+ FNM++L LG ELE I GSV ++ + ++ TS ++ ++
Sbjct: 277 WRGFTGATAHFEPLHIGFNMMSLNTLGRELEGGGIFGSVVFLVYNVAFVVMTSLVMMGMV 336
Query: 121 IALL-------------VAHIPFYRLQNVMDECA-IGFSGVIFSLIVIETSLSGAQ---- 162
L V Q + E + +G+S V+F+ +VI T L Q
Sbjct: 337 FGRLQWIEYQILRTRDEVLRQQLEERQTRLRETSTVGYSAVLFAWMVIST-LERNQPTCP 395
Query: 163 ----SRSVFGLFNIPAKWY------PLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGF 211
S F +++P + P+I L + Q +M VS +GHL GI+ GF +G+
Sbjct: 396 IPFFSDVCFSTYSVPGLPFLKFNIAPVISLFIAQFIMPRVSFMGHLAGIICGFGLHWGW 454
>gi|350630141|gb|EHA18514.1| hypothetical protein ASPNIDRAFT_52561 [Aspergillus niger ATCC 1015]
Length = 899
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 88/224 (39%), Gaps = 16/224 (7%)
Query: 22 IPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVL 81
+P FT V++ +L+ L + +P V +YR T H H
Sbjct: 24 LPLFTRLVLLAIIVFWLLELQTIWSVVQWGSVIPEEV-GFGTMYRLNTYPFIHLGFFHAF 82
Query: 82 FNMLALVPLGSELERIMGSVRMFYITI-LLATSNAILHLLIALLVAHIPFYRLQNVMDEC 140
N+LAL PL E G++ + I L+T A +++LI V H +
Sbjct: 83 LNILALTPLLERFEAEHGTLTAVALFIGPLSTLPAGIYILIEKFVLH---------RNTA 133
Query: 141 AIGFSGVIFSLI---VIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGH 197
+G S +F L+ I T S G IP PL L +L+ N S LGH
Sbjct: 134 VVGSSIWVFLLLGSEAIRTFKSNPYFSFSLGSTKIPTWTSPLFACALVSILVPNTSFLGH 193
Query: 198 LCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFI 241
LC IL G+ G + +P IE L+ R P ++
Sbjct: 194 LCAILVGYLLGLGVLKIFVPPEKVLRWIEGK--LNLLGRLPHYV 235
>gi|269140655|ref|YP_003297356.1| intramembrane serine protease [Edwardsiella tarda EIB202]
gi|387869127|ref|YP_005700596.1| GlpG [Edwardsiella tarda FL6-60]
gi|267986316|gb|ACY86145.1| predicted intramembrane serine protease [Edwardsiella tarda EIB202]
gi|304560440|gb|ADM43104.1| GlpG [Edwardsiella tarda FL6-60]
Length = 273
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 51/90 (56%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T V ++C +YL+ L G + P+ R+Q++R++T + H S LH++FN++
Sbjct: 95 TIGVTLLCILVYLLQLALGDGAVMAYLAWPADAAQRYQLWRYFTPALLHFSPLHIIFNLM 154
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNA 115
LG ++E+ +G+ ++ I ++ A +A
Sbjct: 155 WWWYLGGQVEKRLGAAKLAQIALVSALMSA 184
>gi|9963865|gb|AAG09733.1|AF226732_1 NPD007 [Homo sapiens]
Length = 434
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 77/156 (49%), Gaps = 7/156 (4%)
Query: 54 LPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATS 113
L S + +QVYR T I + + + +L + + ER +G+VR + T++ A
Sbjct: 95 LKSEALRNWQVYRLVTYIFVYENPISLLCGAIIIWRFAGNFERTVGTVRHCFFTVIFAIF 154
Query: 114 NAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIP 173
+AI+ L + + +L V D A GF+ V F+++ + T S + VFG+ +P
Sbjct: 155 SAIIFLSFEAVSS---LSKLGEVED--ARGFTPVAFAMLGVTTVRSRMRRALVFGMV-VP 208
Query: 174 AKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTY 209
+ P +LL L+ S L ++CG+ G AY +
Sbjct: 209 SVLVPWLLLGA-SWLIPQTSFLSNVCGLSIGLAYAH 243
>gi|381399873|ref|ZP_09924890.1| Rhomboid family protein [Microbacterium laevaniformans OR221]
gi|380772836|gb|EIC06523.1| Rhomboid family protein [Microbacterium laevaniformans OR221]
Length = 281
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 52/103 (50%)
Query: 20 ESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLH 79
+ P T +VIV YLI L+ G + + A ++ Q +R T + H S+ H
Sbjct: 74 DGKPVVTYTLVIVTSVFYLIGLIPGIGLYVQNLLAFHAQLAYVQPWRLLTVTLVHASIFH 133
Query: 80 VLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIA 122
+ FNMLAL LG LE ++G R + +L A ++L L+A
Sbjct: 134 IAFNMLALWALGRSLEPLLGRWRFLALYLLSALGGSVLTALLA 176
>gi|315658175|ref|ZP_07911047.1| rhomboid family protein [Staphylococcus lugdunensis M23590]
gi|315496504|gb|EFU84827.1| rhomboid family protein [Staphylococcus lugdunensis M23590]
Length = 489
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 74/152 (48%), Gaps = 23/152 (15%)
Query: 65 YRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALL 124
YR TS+ H + H+L NML+L G +E I+G ++M IL+++ L
Sbjct: 206 YRLITSMFLHFNFEHILMNMLSLFIFGKIVEAIIGPMKML-----------ILYIISGLF 254
Query: 125 VAHIPFYRLQNVMDECAIGFSGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLIL 181
F L D + G SG IF L I+ +S SR + G I L++
Sbjct: 255 G---NFLSLSFNTDTVSAGASGAIFGLIGAIIAMMIISKVYSRKMIGQLLI-----ALVI 306
Query: 182 LVLFQVLMTNVSLLGHLCGILSGFAYTY-GFF 212
L+ F +L++NV+++ HL G +SG Y G++
Sbjct: 307 LIGFSLLLSNVNIMAHLGGFISGLLLIYIGYY 338
>gi|420172602|ref|ZP_14679101.1| rhomboid family protein [Staphylococcus epidermidis NIHLM067]
gi|394241763|gb|EJD87172.1| rhomboid family protein [Staphylococcus epidermidis NIHLM067]
Length = 486
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 83/183 (45%), Gaps = 27/183 (14%)
Query: 30 VIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSLLHVLFNM 84
+I+ + +C++ + F ++ L + F V YR +S+ H + H+L NM
Sbjct: 163 LILINIVIWLCMILYLNRFSDVKLLEVGGLVHFNVVHGEWYRLISSMFLHFNFEHILMNM 222
Query: 85 LALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGF 144
L+L G +E I+GS RM I I+ + F L ++G
Sbjct: 223 LSLFIFGKIVESIIGSWRMLIIYIISG--------------LYGNFVSLSFNTTTISVGA 268
Query: 145 SGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGI 201
SG IF L I + LS ++ + G I L++L++F + M+N++++ HL G
Sbjct: 269 SGAIFGLIGSIFVIMYLSKNFNKKMIGQLLI-----ALVVLIVFSLFMSNINIMAHLGGF 323
Query: 202 LSG 204
+ G
Sbjct: 324 IIG 326
>gi|119592179|gb|EAW71773.1| rhomboid domain containing 2, isoform CRA_a [Homo sapiens]
Length = 409
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Query: 54 LPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATS 113
L S + +QVYR T I + + + +L + + ER +G+VR + T++ A
Sbjct: 95 LKSEALRNWQVYRLVTYIFVYENPISLLCGAIIIWRFAGNFERTVGTVRHCFFTVIFAIF 154
Query: 114 NAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIP 173
+AI+ L + + +L V D A GF+ V F+++ + T S + VFG+ +P
Sbjct: 155 SAIIFLSFEAVSS---LSKLGEVED--ARGFTPVAFAMLGVTTVRSRMRRALVFGMV-VP 208
Query: 174 AKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAY 207
+ P +LL L+ S L ++CG+ G AY
Sbjct: 209 SVLVPWLLLGA-SWLIPQTSFLSNVCGLSIGLAY 241
>gi|418576075|ref|ZP_13140221.1| hypothetical protein SSME_12770 [Staphylococcus saprophyticus
subsp. saprophyticus KACC 16562]
gi|379325137|gb|EHY92269.1| hypothetical protein SSME_12770 [Staphylococcus saprophyticus
subsp. saprophyticus KACC 16562]
Length = 489
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 87/191 (45%), Gaps = 28/191 (14%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSLLHV 80
T A++I+ I+L +LF S ++ L + F V YR TSI H + H+
Sbjct: 163 TYALIILNVVIWLFMVLFLNRS-SDLKLLDVGGLVHFNVVHGEWYRLITSIFLHYNFEHI 221
Query: 81 LFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDEC 140
L NML+L G +E I+G RMF I L+A L + F L D
Sbjct: 222 LMNMLSLFIFGKIVESIVGHWRMFVI------------YLVAGLFGN--FASLSFNTDTV 267
Query: 141 AIGFSGVIFSLI--VIETSLSGAQ-SRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGH 197
++G SG IF LI + G Q +R + G I L++++ + M N++++ H
Sbjct: 268 SVGASGAIFGLIGAIFTFMYIGKQFNRKLIGQLLI-----VLVIMIGLSLFMQNINIVAH 322
Query: 198 LCGILSGFAYT 208
+ G + G T
Sbjct: 323 IGGFIGGLLIT 333
>gi|356557429|ref|XP_003547018.1| PREDICTED: inactive rhomboid protein 1-like [Glycine max]
Length = 389
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 28/166 (16%)
Query: 58 VISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAIL 117
VI R QV+R ++ I HG ++H+L NML+LV +G LE+ G VR+ ++ ++ ++L
Sbjct: 120 VIHRHQVWRLFSCIWLHGGVVHLLANMLSLVFIGIRLEQEFGFVRIGFLYVISGFGGSLL 179
Query: 118 HLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWY 177
L + + ++G SG +F L L G S + K+
Sbjct: 180 SALF--------------IQEGISVGASGALFGL------LGGMLSELLINWTIYANKFA 219
Query: 178 PLILLVLFQVLMTNVSLL------GHLCGILSGFAYTYGFFNLLMP 217
L+ L++ V+ V +L H+ G +SGF GF L+ P
Sbjct: 220 ALLTLIVIVVINLAVGILPHVDNFAHIGGFVSGF--LLGFIFLIRP 263
>gi|358371343|dbj|GAA87951.1| rhomboid protein 2 [Aspergillus kawachii IFO 4308]
Length = 911
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 91/223 (40%), Gaps = 16/223 (7%)
Query: 22 IPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVL 81
+P FT V++ +L+ L + +P V +YR T H H
Sbjct: 24 LPLFTRLVLLAIIVFWLLELQTIWSVVQWGSVIPEEV-GFGTMYRLNTYPFIHLGFFHAF 82
Query: 82 FNMLALVPLGSELERIMGSVRMFYITI-LLATSNAILHLLIALLVAHIPFYRLQNVMDEC 140
N+LAL PL E G++ + I L+T A +++LI V H +
Sbjct: 83 LNILALTPLLERFEAEHGTLTAVALFIGPLSTLPAGIYILIEKFVLH---------RNTA 133
Query: 141 AIGFSGVIFSLIVIETSLSGAQSRSVFGL--FNIPAKWYPLILLVLFQVLMTNVSLLGHL 198
+G S +F L+ E ++ +S F L IP PL L +L+ N S LGHL
Sbjct: 134 VVGSSIWVFLLLGSE-AIRTFKSNPYFSLGSTKIPTWTSPLFACALVSILVPNTSFLGHL 192
Query: 199 CGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFI 241
C IL G+ G + +P IE L+ R P ++
Sbjct: 193 CAILVGYLLGLGVLKIFVPPEKVLRWIEGK--LNLLGRLPHYV 233
>gi|289550680|ref|YP_003471584.1| membrane peptidase [Staphylococcus lugdunensis HKU09-01]
gi|385784306|ref|YP_005760479.1| rhomboid family protein [Staphylococcus lugdunensis N920143]
gi|418413982|ref|ZP_12987198.1| hypothetical protein HMPREF9308_00363 [Staphylococcus lugdunensis
ACS-027-V-Sch2]
gi|289180212|gb|ADC87457.1| Putative membrane peptidase [Staphylococcus lugdunensis HKU09-01]
gi|339894562|emb|CCB53844.1| rhomboid family protein [Staphylococcus lugdunensis N920143]
gi|410877620|gb|EKS25512.1| hypothetical protein HMPREF9308_00363 [Staphylococcus lugdunensis
ACS-027-V-Sch2]
Length = 485
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 74/152 (48%), Gaps = 23/152 (15%)
Query: 65 YRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALL 124
YR TS+ H + H+L NML+L G +E I+G ++M IL+++ L
Sbjct: 202 YRLITSMFLHFNFEHILMNMLSLFIFGKIVEAIIGPMKML-----------ILYIISGLF 250
Query: 125 VAHIPFYRLQNVMDECAIGFSGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLIL 181
F L D + G SG IF L I+ +S SR + G I L++
Sbjct: 251 G---NFLSLSFNTDTVSAGASGAIFGLIGAIIAMMIISKVYSRKMIGQLLI-----ALVI 302
Query: 182 LVLFQVLMTNVSLLGHLCGILSGFAYTY-GFF 212
L+ F +L++NV+++ HL G +SG Y G++
Sbjct: 303 LIGFSLLLSNVNIMAHLGGFISGLLLIYIGYY 334
>gi|418791133|ref|ZP_13346901.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19447]
gi|418795550|ref|ZP_13351255.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19449]
gi|418798796|ref|ZP_13354470.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19567]
gi|392756418|gb|EJA13315.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19447]
gi|392758934|gb|EJA15799.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19449]
gi|392766274|gb|EJA23056.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19567]
Length = 274
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 86/193 (44%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T V++ C +Y+ L G + P + +F+ +R++T I H SL+H+LFN+L
Sbjct: 95 TWIVMLACVLVYIAMSLIGDQTVMVWLAWPFDPVLKFEFWRYFTHIFMHFSLMHILFNLL 154
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT+ + ALL ++ Q G S
Sbjct: 155 WWWYLGGAVEKRLGSGKLIVITV-----------ISALLSGYVQ----QKFSGPWFGGLS 199
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ F + M N +
Sbjct: 200 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALLWIVAGWFD-----WFGMSMANGA--- 251
Query: 197 HLCGILSGFAYTY 209
H+ G++ G A +
Sbjct: 252 HIAGLIVGLAMAF 264
>gi|146413501|ref|XP_001482721.1| hypothetical protein PGUG_04676 [Meyerozyma guilliermondii ATCC
6260]
Length = 291
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 99/229 (43%), Gaps = 24/229 (10%)
Query: 54 LPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATS 113
L + I + ++ R + H + H N+++L PL + E++ G+V LLA S
Sbjct: 71 LYAGAIFKLELNRISMYPLAHTGIFHWFVNVISLSPLLARFEKVHGTVYTGITLNLLAVS 130
Query: 114 NAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGL---- 169
A+++ L+A +++ P R++ G S + F + +E QS
Sbjct: 131 TALIYSLLAGIIS--PSTRVE--------GLSAICF--LFLEFYALKEQSYYPIAFQWGD 178
Query: 170 -FNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESS 228
+ +P K+ ++L++ +L+ N SLLGHL GI SG+ + +L P IE
Sbjct: 179 RYRLPTKYSAFVVLIITFILVPNSSLLGHLAGIGSGYLLAENYLKILYPPRKVILFIEDK 238
Query: 229 SLLSTCIRQPKFI-----LCTGGNPSGYIPTYSGQNTSSSGLF--SGNI 270
L P + L Y+P + +SS F SG++
Sbjct: 239 LELLIAKLLPIVVYYREDLAADTRTVAYVPLFGSDAEASSARFESSGHV 287
>gi|361067741|gb|AEW08182.1| Pinus taeda anonymous locus 2_2414_01 genomic sequence
gi|383176329|gb|AFG71694.1| Pinus taeda anonymous locus 2_2414_01 genomic sequence
gi|383176331|gb|AFG71695.1| Pinus taeda anonymous locus 2_2414_01 genomic sequence
gi|383176333|gb|AFG71696.1| Pinus taeda anonymous locus 2_2414_01 genomic sequence
gi|383176335|gb|AFG71697.1| Pinus taeda anonymous locus 2_2414_01 genomic sequence
gi|383176337|gb|AFG71698.1| Pinus taeda anonymous locus 2_2414_01 genomic sequence
gi|383176339|gb|AFG71699.1| Pinus taeda anonymous locus 2_2414_01 genomic sequence
gi|383176341|gb|AFG71700.1| Pinus taeda anonymous locus 2_2414_01 genomic sequence
gi|383176343|gb|AFG71701.1| Pinus taeda anonymous locus 2_2414_01 genomic sequence
gi|383176345|gb|AFG71702.1| Pinus taeda anonymous locus 2_2414_01 genomic sequence
gi|383176347|gb|AFG71703.1| Pinus taeda anonymous locus 2_2414_01 genomic sequence
gi|383176349|gb|AFG71704.1| Pinus taeda anonymous locus 2_2414_01 genomic sequence
gi|383176351|gb|AFG71705.1| Pinus taeda anonymous locus 2_2414_01 genomic sequence
gi|383176353|gb|AFG71706.1| Pinus taeda anonymous locus 2_2414_01 genomic sequence
gi|383176355|gb|AFG71707.1| Pinus taeda anonymous locus 2_2414_01 genomic sequence
gi|383176357|gb|AFG71708.1| Pinus taeda anonymous locus 2_2414_01 genomic sequence
gi|383176359|gb|AFG71709.1| Pinus taeda anonymous locus 2_2414_01 genomic sequence
gi|383176361|gb|AFG71710.1| Pinus taeda anonymous locus 2_2414_01 genomic sequence
Length = 158
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 64/116 (55%), Gaps = 7/116 (6%)
Query: 94 LERIMGSVRMF-YITILLATSNAILHLLIALLVAHIPF-YRLQNVMDECAIGFSGVIFSL 151
LER+MGS + +LL S+ I+ + +L + Y L + ECA+GFS V+F+L
Sbjct: 1 LERMMGSTEFASMVAVLLGLSHGIVVVTAKVLATFFDYPYPLTS---ECAVGFSAVLFAL 57
Query: 152 IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAY 207
V+ S S +V+G+ +PA+ L+L Q+ + VS LGHL GI +G Y
Sbjct: 58 KVVLNSNS-PNLTNVYGVV-VPARHAAWAELLLIQMFVPGVSFLGHLSGIFAGILY 111
>gi|417643203|ref|ZP_12293263.1| peptidase, S54 family [Staphylococcus warneri VCU121]
gi|330685982|gb|EGG97605.1| peptidase, S54 family [Staphylococcus epidermidis VCU121]
Length = 405
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 81/191 (42%), Gaps = 27/191 (14%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSLLHV 80
+ ++I+ I +C++ ++ F +I L + F V YR TS+ H + H+
Sbjct: 159 VTYILIISNVILWLCMILYFNRFSDIKLLDVGGLVHFNVVHGEWYRLVTSMFLHFNFEHI 218
Query: 81 LFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDEC 140
L NML+L G +E ++GS +M I + F L
Sbjct: 219 LMNMLSLYIFGKIVESVLGSWKMLAIYLFAGIFG--------------NFVSLSFNTTTI 264
Query: 141 AIGFSGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGH 197
++G SG IF L I LS + V G I L++L+ + M+N++++ H
Sbjct: 265 SVGASGAIFGLIGSIFAILYLSKTFDKRVIGQLLI-----ALVILIGLSLFMSNINVMAH 319
Query: 198 LCGILSGFAYT 208
L G + G T
Sbjct: 320 LGGFIGGLLIT 330
>gi|73662516|ref|YP_301297.1| hypothetical protein SSP1207 [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|72495031|dbj|BAE18352.1| conserved hypothetical protein [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 485
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 87/191 (45%), Gaps = 28/191 (14%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSLLHV 80
T A++I+ I+L +LF S ++ L + F V YR TSI H + H+
Sbjct: 159 TYALIILNVVIWLFMVLFLNRS-SDLKLLDIGGLVHFNVVHGEWYRLITSIFLHYNFEHI 217
Query: 81 LFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDEC 140
L NML+L G +E I+G RMF I L+A L + F L D
Sbjct: 218 LMNMLSLFIFGKIVESIVGHWRMFVI------------YLVAGLFGN--FASLSFNTDTV 263
Query: 141 AIGFSGVIFSLI--VIETSLSGAQ-SRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGH 197
++G SG IF LI + G Q +R + G I L++++ + M N++++ H
Sbjct: 264 SVGASGAIFGLIGAIFTFMYIGKQFNRKLIGQLLI-----VLVIMIGLSLFMQNINIVAH 318
Query: 198 LCGILSGFAYT 208
+ G + G T
Sbjct: 319 IGGFIGGLLIT 329
>gi|223992547|ref|XP_002285957.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220977272|gb|EED95598.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 338
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 84/169 (49%), Gaps = 8/169 (4%)
Query: 49 YEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVR--MFYI 106
Y + +P I +F++YR +TS + +L ++F + + G +LE+ +GS + +
Sbjct: 52 YALANIPLFTIFKFELYRIFTSPLVCADILSLIFAFMGFMNHGIKLEQSVGSCMFGVLFF 111
Query: 107 TILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSV 166
T+ +A++ L + + L ++ + ++G V+ ++I +E S + ++
Sbjct: 112 TLTVASNVLFLLVSVLLWG----LTNSESYLVGASMGIWSVLLAIIAVECSQAPPDTKRK 167
Query: 167 FGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLL 215
+P +YPL+LL LF + V L + G+ G+AY YG + L
Sbjct: 168 LFFLTVPTLYYPLVLLALFS-MFAGVK-LAYCLGVAVGYAYGYGKLDRL 214
>gi|168465202|ref|ZP_02699094.1| protein of glp regulon [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|238910474|ref|ZP_04654311.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|416425759|ref|ZP_11692542.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|416434003|ref|ZP_11697402.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|416437242|ref|ZP_11698648.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|416443210|ref|ZP_11702823.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|416453252|ref|ZP_11709505.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|416459545|ref|ZP_11713999.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|416463130|ref|ZP_11715852.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|416480551|ref|ZP_11722951.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|416486799|ref|ZP_11725192.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|416498967|ref|ZP_11730536.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|416506037|ref|ZP_11734283.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB31]
gi|416516647|ref|ZP_11739196.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. ATCC BAA710]
gi|416531790|ref|ZP_11745737.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. LQC 10]
gi|416544579|ref|ZP_11752908.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|416553117|ref|ZP_11757528.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. 29N]
gi|416564347|ref|ZP_11763240.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. 42N]
gi|416568828|ref|ZP_11765079.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. 4441 H]
gi|416578674|ref|ZP_11770710.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|416584368|ref|ZP_11774069.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|416589727|ref|ZP_11777312.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|416597390|ref|ZP_11781971.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|416605248|ref|ZP_11786793.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|416616042|ref|ZP_11793845.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|416624530|ref|ZP_11798101.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|416635226|ref|ZP_11803019.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|416643888|ref|ZP_11806307.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|416657853|ref|ZP_11813949.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|416667084|ref|ZP_11817968.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|416676448|ref|ZP_11821789.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|416699452|ref|ZP_11828671.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|416713901|ref|ZP_11837394.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|416720890|ref|ZP_11842421.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|416724188|ref|ZP_11844712.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|416734664|ref|ZP_11851136.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|416741626|ref|ZP_11855259.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|416749565|ref|ZP_11859313.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|416761217|ref|ZP_11865351.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|416772306|ref|ZP_11873236.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
gi|417361226|ref|ZP_12135163.1| GlpG protein [Salmonella enterica subsp. enterica serovar Give str.
S5-487]
gi|417386354|ref|ZP_12151078.1| GlpG protein [Salmonella enterica subsp. enterica serovar
Johannesburg str. S5-703]
gi|417470295|ref|ZP_12166488.1| GlpG protein [Salmonella enterica subsp. enterica serovar
Montevideo str. S5-403]
gi|418482995|ref|ZP_13052007.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. 80959-06]
gi|418509171|ref|ZP_13075468.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035327]
gi|418762152|ref|ZP_13318285.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35185]
gi|418768023|ref|ZP_13324079.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35199]
gi|418769135|ref|ZP_13325170.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21539]
gi|418774189|ref|ZP_13330160.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Newport str. CVM 33953]
gi|418784274|ref|ZP_13340112.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21559]
gi|418804415|ref|ZP_13360020.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35202]
gi|419790555|ref|ZP_14316225.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Newport str. Levine 1]
gi|419794997|ref|ZP_14320603.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Newport str. Levine 15]
gi|195632242|gb|EDX50726.1| protein of glp regulon [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|322614109|gb|EFY11045.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322618001|gb|EFY14894.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322625385|gb|EFY22211.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322629850|gb|EFY26623.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322632261|gb|EFY29012.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322636388|gb|EFY33095.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322643244|gb|EFY39813.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322644755|gb|EFY41291.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322651221|gb|EFY47605.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322654911|gb|EFY51226.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322659168|gb|EFY55420.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322663131|gb|EFY59335.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322668617|gb|EFY64770.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322674579|gb|EFY70672.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322678215|gb|EFY74276.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322682528|gb|EFY78549.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322684241|gb|EFY80247.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323192204|gb|EFZ77436.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323196370|gb|EFZ81522.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323201829|gb|EFZ86892.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323211964|gb|EFZ96791.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323216870|gb|EGA01593.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323222269|gb|EGA06652.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323224284|gb|EGA08573.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323233521|gb|EGA17614.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323237017|gb|EGA21084.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323243768|gb|EGA27784.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323245990|gb|EGA29977.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323250766|gb|EGA34644.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323255777|gb|EGA39527.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323267662|gb|EGA51144.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323268542|gb|EGA52009.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
gi|353584576|gb|EHC44648.1| GlpG protein [Salmonella enterica subsp. enterica serovar Give str.
S5-487]
gi|353603592|gb|EHC58646.1| GlpG protein [Salmonella enterica subsp. enterica serovar
Johannesburg str. S5-703]
gi|353625488|gb|EHC74275.1| GlpG protein [Salmonella enterica subsp. enterica serovar
Montevideo str. S5-403]
gi|363548640|gb|EHL33008.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. LQC 10]
gi|363555314|gb|EHL39542.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB31]
gi|363562280|gb|EHL46385.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. ATCC BAA710]
gi|363563382|gb|EHL47459.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. 29N]
gi|363571219|gb|EHL55136.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. 42N]
gi|363577375|gb|EHL61199.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. 4441 H]
gi|366062397|gb|EHN26630.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. 80959-06]
gi|366078671|gb|EHN42670.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035327]
gi|392613244|gb|EIW95704.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Newport str. Levine 1]
gi|392613705|gb|EIW96160.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Newport str. Levine 15]
gi|392732813|gb|EIZ90020.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35199]
gi|392737861|gb|EIZ95013.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35185]
gi|392740572|gb|EIZ97691.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21539]
gi|392751691|gb|EJA08639.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Newport str. CVM 33953]
gi|392754618|gb|EJA11534.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21559]
gi|392770572|gb|EJA27297.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35202]
Length = 274
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 86/193 (44%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T V++ C +Y+ L G + P + +F+ +R++T I H SL+H+LFN+L
Sbjct: 95 TWIVMLACVLVYIAMSLIGDQTVMVWLAWPFDPVLKFEFWRYFTHIFMHFSLMHILFNLL 154
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT+ + ALL ++ Q G S
Sbjct: 155 WWWYLGGAVEKRLGSGKLIVITV-----------ISALLSGYVQ----QKFSGPWFGGLS 199
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ F + M N +
Sbjct: 200 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALLWIVAGWFD-----WFGMSMANGA--- 251
Query: 197 HLCGILSGFAYTY 209
H+ G++ G A +
Sbjct: 252 HIAGLIVGLAMAF 264
>gi|397690913|ref|YP_006528167.1| hypothetical protein MROS_1922 [Melioribacter roseus P3M]
gi|395812405|gb|AFN75154.1| Hypothetical protein MROS_1922 [Melioribacter roseus P3M]
Length = 306
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 82/193 (42%), Gaps = 34/193 (17%)
Query: 62 FQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLI 121
FQ+++F T HGS H+LFNM L G E+ +MG + + + +L+
Sbjct: 76 FQIWQFITYQFMHGSFTHILFNMFMLWMFGMEIANLMGPRKFLIFYLACGIGAGLFQILL 135
Query: 122 ALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAK-WYPLI 180
+ L+ + IG SG +F +++ R + F IP K Y +
Sbjct: 136 SPLLGSV---------SAPTIGASGAVFGIMIAFAMF--FPDRYILFYFLIPIKAKYLIA 184
Query: 181 LLVLFQVLMTN----VSLLGHLCGILSGFAY-----TYGF-----FNLLMPGTSFYSAIE 226
+LVLF+ + N V+ L H+ G ++GF + Y F FNL SF S
Sbjct: 185 ILVLFEFVSVNEPTIVAHLAHIGGAVTGFLFIMLDRNYHFRFDNLFNLFKRSKSFGS--- 241
Query: 227 SSSLLSTCIRQPK 239
S R+P+
Sbjct: 242 -----SAKFRKPR 249
>gi|260439384|ref|ZP_05793200.1| rhomboid family protein [Butyrivibrio crossotus DSM 2876]
gi|292808180|gb|EFF67385.1| rhomboid family protein [Butyrivibrio crossotus DSM 2876]
Length = 337
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 74/159 (46%), Gaps = 20/159 (12%)
Query: 2 RPNIVSEAGLSTRANQWWESIPFFTSAVVIVCGTIYLICLLFG---YDSFY---EICFLP 55
RP S+AG+ R + S + +I I I + G Y+ FY + +
Sbjct: 125 RPYHTSDAGVKARVMKARLSRYSVVNFALIAANIIVYIIVASGGNTYNGFYLATKGGLVA 184
Query: 56 SAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNA 115
VI + YR +TS+ H + H+ NM+ L+ +G +ERI+G VR A
Sbjct: 185 KYVIDYKEYYRLFTSMFLHAGVQHLASNMIMLLFVGDTIERIVGHVRY-----------A 233
Query: 116 ILHLLIALL--VAHIPFYRLQNVMDECAIGFSGVIFSLI 152
I++L L V + +YR + M C IG SG IF+++
Sbjct: 234 IIYLAGGLFASVGTLLYYRTYD-MYACCIGASGAIFAVM 271
>gi|194469105|ref|ZP_03075089.1| protein of glp regulon [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|205358585|ref|ZP_03224070.1| protein of glp regulon [Salmonella enterica subsp. enterica serovar
Kentucky str. CDC 191]
gi|194455469|gb|EDX44308.1| protein of glp regulon [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|205333066|gb|EDZ19830.1| protein of glp regulon [Salmonella enterica subsp. enterica serovar
Kentucky str. CDC 191]
Length = 276
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T V++ C +Y+ L G + P + +F+ +R++T I H SL+H+LFN+L
Sbjct: 97 TWIVMLACVLVYIAMSLIGDQTVMVWLAWPFDPVLKFEFWRYFTHIFMHFSLMHILFNLL 156
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT++ A + Y Q G S
Sbjct: 157 WWWYLGGAVEKRLGSGKLIVITVISALLSG---------------YVQQKFSGPWFGGLS 201
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ F + M N +
Sbjct: 202 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALLWIVAGWFD-----WFGMSMANGA--- 253
Query: 197 HLCGILSGFAYTY 209
H+ G++ G A +
Sbjct: 254 HIAGLIVGLAMAF 266
>gi|204928856|ref|ZP_03220055.1| protein of glp regulon [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
gi|205360309|ref|ZP_03224584.1| protein of glp regulon [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
gi|375003377|ref|ZP_09727716.1| peptidase, S54 family protein [Salmonella enterica subsp. enterica
serovar Infantis str. SARB27]
gi|416533495|ref|ZP_11746452.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB30]
gi|416647883|ref|ZP_11808647.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|416708821|ref|ZP_11833625.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|416756858|ref|ZP_11862765.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|417431472|ref|ZP_12161248.1| GlpG protein [Salmonella enterica subsp. enterica serovar
Mississippi str. A4-633]
gi|418492270|ref|ZP_13058769.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035278]
gi|418494486|ref|ZP_13060937.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035318]
gi|418497867|ref|ZP_13064283.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035320]
gi|418504830|ref|ZP_13071184.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035321]
gi|418525302|ref|ZP_13091284.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008286]
gi|418782144|ref|ZP_13338010.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35188]
gi|452122671|ref|YP_007472919.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Javiana str. CFSAN001992]
gi|204322289|gb|EDZ07487.1| protein of glp regulon [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
gi|205350148|gb|EDZ36779.1| protein of glp regulon [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
gi|323228212|gb|EGA12343.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323261365|gb|EGA44951.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|353074292|gb|EHB40053.1| peptidase, S54 family protein [Salmonella enterica subsp. enterica
serovar Infantis str. SARB27]
gi|353614664|gb|EHC66429.1| GlpG protein [Salmonella enterica subsp. enterica serovar
Mississippi str. A4-633]
gi|363568157|gb|EHL52146.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB30]
gi|366058188|gb|EHN22479.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035278]
gi|366061247|gb|EHN25493.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035318]
gi|366070282|gb|EHN34397.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035321]
gi|366075032|gb|EHN39092.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035320]
gi|366829943|gb|EHN56817.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|372206873|gb|EHP20375.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008286]
gi|392744449|gb|EJA01496.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35188]
gi|451911675|gb|AGF83481.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Javiana str. CFSAN001992]
Length = 276
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T V++ C +Y+ L G + P + +F+ +R++T I H SL+H+LFN+L
Sbjct: 97 TWIVMLACVLVYIAMSLIGDQTVMVWLAWPFDPVLKFEFWRYFTHIFMHFSLMHILFNLL 156
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT++ A + Y Q G S
Sbjct: 157 WWWYLGGAVEKRLGSGKLIVITVISALLSG---------------YVQQKFSGPWFGGLS 201
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ F + M N +
Sbjct: 202 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALLWIVAGWFD-----WFGMSMANGA--- 253
Query: 197 HLCGILSGFAYTY 209
H+ G++ G A +
Sbjct: 254 HIAGLIVGLAMAF 266
>gi|406885514|gb|EKD32686.1| hypothetical protein ACD_77C00001G0004 [uncultured bacterium]
Length = 226
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 97/209 (46%), Gaps = 18/209 (8%)
Query: 14 RANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVF 73
R + ++ S+P +VI+ G + LI G + YE L F+ Y+F T +
Sbjct: 5 RGSGFFNSMPPVIKNLVIINGLMLLITFFAG-NFMYEKFSLFYFGSELFRPYQFVTHMFM 63
Query: 74 HGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILH-LLIALLVAH----- 127
HG+ +H+ FNM +L+ G LE++ GS + F ++ A LH L++ + VA
Sbjct: 64 HGNFIHLFFNMYSLIIFGVVLEQVWGSKKFFIYYMVTGLGAAALHSLVLYIDVASQMNAL 123
Query: 128 -----IPFYRLQNVMDECAIGFSGVIFSLIVIETSL-SGAQSRSVFGLFNIPAKWYPLIL 181
+ ++ +M +G SG ++ +++ L + +F + AKW+ LI
Sbjct: 124 EAGSAVAKANIEAIMFTPTVGASGAVYGVLLAYGMLFPNNVLQLIFPPVALKAKWFVLIF 183
Query: 182 LVLFQVLMT-----NVSLLGHLCGILSGF 205
+ VL N++ HL G+L G+
Sbjct: 184 GAIELVLGVSNTGGNIAHFAHLGGMLFGY 212
>gi|6325010|ref|NP_015078.1| Rbd2p [Saccharomyces cerevisiae S288c]
gi|74583829|sp|Q12270.1|RBD2_YEAST RecName: Full=Rhomboid protein 2
gi|1061243|emb|CAA91598.1| putative protein [Saccharomyces cerevisiae]
gi|1370507|emb|CAA97967.1| unnamed protein product [Saccharomyces cerevisiae]
gi|285815299|tpg|DAA11191.1| TPA: Rbd2p [Saccharomyces cerevisiae S288c]
gi|392296043|gb|EIW07146.1| Rbd2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 262
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 12/205 (5%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T+ +V+ IYL+ +F ++ P ++ + Q+ R + H SL H+LFN+L
Sbjct: 18 TTGLVVFLTAIYLLSFIFALRE--DLSLAPESLF-KLQMSRLSLYPLIHLSLPHLLFNVL 74
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
A+ + E G+V L A IL+ L+ L+ + A G+
Sbjct: 75 AIWAPLNLFEETHGTVYTGVFLNLSALFAGILYCLLGKLL-------YPEALVAGASGWC 127
Query: 146 GVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGF 205
+F+ + S ++R ++IP + PL+LLV V++ S GH G+ G+
Sbjct: 128 FTLFAYYSFKESQIRPRTRIFRTDYSIPTLYTPLVLLVAIAVVIPGSSFWGHFFGLCVGY 187
Query: 206 A--YTYGFFNLLMPGTSFYSAIESS 228
A Y +FN + P + IE S
Sbjct: 188 AIGYKESWFNKITPPGWIITKIEKS 212
>gi|303289455|ref|XP_003064015.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454331|gb|EEH51637.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 319
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 85/207 (41%), Gaps = 27/207 (13%)
Query: 26 TSAVVIVCGTI--YLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFN 83
TS VV C I YL GYD ++ +AV+ + +R T+ + H S+LH+LFN
Sbjct: 15 TSLVVATCAAITWYLHARGLGYD---DVGMSYAAVVREKKYHRCVTASLSHVSVLHLLFN 71
Query: 84 MLALVPLG-----------SELERIMGS------VRMFYITILLATSNAILHLLIALLVA 126
M L G S+ E G + +LL T +L LL
Sbjct: 72 MSTLWSCGVVEAAGGRGVMSDAESAAGYPWGSAWYARLSLLMLLGTCGIVLATYHVLLTR 131
Query: 127 HIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFG-LFNIPAKWYPLILLVLF 185
+R + A+G+S V+F + I + S + G N+P P L
Sbjct: 132 ----FRREEYERVTAVGYSAVVFGWMTILSVKRPTSSLVLIGGAVNLPVNLAPFASLAFT 187
Query: 186 QVLMTNVSLLGHLCGILSGFAYTYGFF 212
+++ S +GHL GI+ G+ + F
Sbjct: 188 SIVVPRASFVGHLAGIVMGYLIAWDLF 214
>gi|452822090|gb|EME29113.1| hypothetical protein isoform 1 [Galdieria sulphuraria]
Length = 195
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 87/179 (48%), Gaps = 4/179 (2%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T V+ +C ++L+ G+ S+Y++ VI + +R+ +S + H SL+H++ NM
Sbjct: 21 TCLVIAICIIVWLVITYKGW-SYYDVGCNYDCVIVDKETWRWISSTLSHISLMHLILNMY 79
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
+L L S +E+ +GS+ +++A + + L I L + + + V +G+S
Sbjct: 80 SLWNL-SWMEQRLGSLVYLTWNVVIAFLSTCVTLFINYL--QLTVFHSEQVRHVYLVGYS 136
Query: 146 GVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSG 204
V+F L VI + + I W P I L + +L+ S +GH GIL G
Sbjct: 137 AVLFGLFVIASQHIKVARIWILDEVLISPIWIPFISLGVVTLLVPEASFVGHCSGILIG 195
>gi|340356603|ref|ZP_08679245.1| S54 family unassigned serine peptidase [Sporosarcina newyorkensis
2681]
gi|339620530|gb|EGQ25099.1| S54 family unassigned serine peptidase [Sporosarcina newyorkensis
2681]
Length = 202
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 79/157 (50%), Gaps = 17/157 (10%)
Query: 58 VISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAIL 117
+I+ + +R T + HG L H+LFNM +L G ELE+I G R +ITI
Sbjct: 51 LIANGEYWRLVTPMFLHGGLTHLLFNMFSLFIFGPELEKIAGKAR--FITI--------- 99
Query: 118 HLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWY 177
++A L + Y LQ+ D +G SG IF + +L ++ VF +
Sbjct: 100 -YMLAGLFGDVATYFLQS-GDYRHLGASGAIFGVFGAFGALV-YYTKHVFP--QLKQVIL 154
Query: 178 PLILL-VLFQVLMTNVSLLGHLCGILSGFAYTYGFFN 213
P+I++ V+ + TN+++ H+ G+++GF +FN
Sbjct: 155 PIIVISVVMTFVGTNINVTAHIAGLITGFLIGLSYFN 191
>gi|171057356|ref|YP_001789705.1| rhomboid family protein [Leptothrix cholodnii SP-6]
gi|170774801|gb|ACB32940.1| Rhomboid family protein [Leptothrix cholodnii SP-6]
Length = 200
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 56/106 (52%), Gaps = 5/106 (4%)
Query: 21 SIPFFTSAVVIVCGTIYLICLLFG--YDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLL 78
+P T A++++C ++ + LLFG + + + L S + F ++ T HG L
Sbjct: 3 QLPPVTKALMLICTAMFCVQLLFGSWLEGLFALWPLGSGL---FMPWQPLTHAFLHGDPL 59
Query: 79 HVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALL 124
H+ FNM L GSE+E I G R ++ + A + A+ +L++LL
Sbjct: 60 HLFFNMFGLWMFGSEIEMIWGRKRYWHFLLASAVAGAVAQMLVSLL 105
>gi|355747580|gb|EHH52077.1| hypothetical protein EGM_12447 [Macaca fascicularis]
Length = 364
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Query: 54 LPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATS 113
L S + +QVYR T I + + + +L + + ER +G+VR + T++ A
Sbjct: 50 LKSEALRNWQVYRLVTYIFVYENPISLLCGAIIIWRFAGNFERTVGTVRHCFFTVIFAIF 109
Query: 114 NAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIP 173
+AI+ L + + +L V D A GF+ V F+++ + T S + VFG+ +P
Sbjct: 110 SAIIFLSFEAVSS---LSKLGEVED--ARGFTPVAFAMLGVTTVRSRMRRALVFGMV-VP 163
Query: 174 AKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAY 207
+ P +LL L+ S L ++CG+ G AY
Sbjct: 164 SVLVPWLLLGA-SWLIPQTSFLSNVCGLSIGLAY 196
>gi|292618421|ref|XP_001344100.3| PREDICTED: uncharacterized protein At3g58460-like [Danio rerio]
Length = 380
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 126/306 (41%), Gaps = 36/306 (11%)
Query: 11 LSTRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICF--------LPSAVISRF 62
+++ +W ++ + + CG + ++ +L + S + C L S+ + R
Sbjct: 1 MNSAMKKWKQTCADLAPGLDLTCGIVSVV-VLSCFFSVVQYCLHISGHFFSLESSAVIRG 59
Query: 63 QVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIA 122
VY+ T ++H ++ L L +V LE+ +GSVR + T+LL++ +
Sbjct: 60 HVYQLLTYFLYHKNMGDFLLGGLLMVFPCRGLEKGVGSVRFLHRTLLLSS-------ITG 112
Query: 123 LLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILL 182
LL + + G + S++ + T SG + + G+ N+P P I L
Sbjct: 113 LLYVLLESLLISPSSRSSVNGLIPLALSVLGLMTINSGMKVAYIMGI-NVPTSSLPWIFL 171
Query: 183 VLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESS------------SL 230
++ + + N + ++ I++G Y G+F+LL S S +E
Sbjct: 172 IIITLFVPNTVFMCNVLAIVTGILYGMGWFSLLEMSESTASVLEKKIPFRLLKHIPGVQF 231
Query: 231 LSTCIRQPKFILCTGGNPSGYIP--TYSGQNTSSSGLFSGNIWSNLSSWMPQRETSSQPT 288
+ + K L P G P TYS N ++S + GN+ + + W S P
Sbjct: 232 IPASTEERKKPLDLSDAPPGSYPVQTYSLVNATNSPVV-GNLPNTFNGW----PVSLHPQ 286
Query: 289 QDSRFP 294
Q FP
Sbjct: 287 QQHTFP 292
>gi|94818790|ref|NP_001035546.1| rhomboid domain-containing protein 2 isoform a [Homo sapiens]
gi|55628764|ref|XP_519156.1| PREDICTED: rhomboid domain-containing protein 2 isoform 2 [Pan
troglodytes]
gi|397475063|ref|XP_003808971.1| PREDICTED: rhomboid domain-containing protein 2 [Pan paniscus]
gi|118595708|sp|Q6NTF9.2|RHBD2_HUMAN RecName: Full=Rhomboid domain-containing protein 2
gi|5656743|gb|AAD45960.1|AC005067_2 Supported by Human EST H08032.1 (NID:g872854), mouse EST AA870042.1
(NID:g2965487), and genscan [Homo sapiens]
gi|410216274|gb|JAA05356.1| rhomboid domain containing 2 [Pan troglodytes]
gi|410255096|gb|JAA15515.1| rhomboid domain containing 2 [Pan troglodytes]
gi|410290920|gb|JAA24060.1| rhomboid domain containing 2 [Pan troglodytes]
gi|410348404|gb|JAA40806.1| rhomboid domain containing 2 [Pan troglodytes]
Length = 364
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Query: 54 LPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATS 113
L S + +QVYR T I + + + +L + + ER +G+VR + T++ A
Sbjct: 50 LKSEALRNWQVYRLVTYIFVYENPISLLCGAIIIWRFAGNFERTVGTVRHCFFTVIFAIF 109
Query: 114 NAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIP 173
+AI+ L + + +L V D A GF+ V F+++ + T S + VFG+ +P
Sbjct: 110 SAIIFLSFEAVSS---LSKLGEVED--ARGFTPVAFAMLGVTTVRSRMRRALVFGMV-VP 163
Query: 174 AKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAY 207
+ P +LL L+ S L ++CG+ G AY
Sbjct: 164 SVLVPWLLLGA-SWLIPQTSFLSNVCGLSIGLAY 196
>gi|355560549|gb|EHH17235.1| hypothetical protein EGK_13585 [Macaca mulatta]
gi|387539278|gb|AFJ70266.1| rhomboid domain-containing protein 2 isoform a [Macaca mulatta]
Length = 364
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Query: 54 LPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATS 113
L S + +QVYR T I + + + +L + + ER +G+VR + T++ A
Sbjct: 50 LKSEALRNWQVYRLVTYIFVYENPISLLCGAIIIWRFAGNFERTVGTVRHCFFTVIFAIF 109
Query: 114 NAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIP 173
+AI+ L + + +L V D A GF+ V F+++ + T S + VFG+ +P
Sbjct: 110 SAIIFLSFEAVSS---LSKLGEVED--ARGFTPVAFAMLGVTTVRSRMRRALVFGMV-VP 163
Query: 174 AKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAY 207
+ P +LL L+ S L ++CG+ G AY
Sbjct: 164 SVLVPWLLLGA-SWLIPQTSFLSNVCGLSIGLAY 196
>gi|300725858|ref|ZP_07059322.1| rhomboid family protein [Prevotella bryantii B14]
gi|299776846|gb|EFI73392.1| rhomboid family protein [Prevotella bryantii B14]
Length = 315
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 79/179 (44%), Gaps = 23/179 (12%)
Query: 50 EICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITIL 109
+IC L + FQVY+ T + H H++FNM AL G +ER+ G + + I
Sbjct: 33 DICGLHFFLAPDFQVYQLVTYMFMHAGWQHIIFNMFALWMFGCVVERVWGPKKFLFYYIF 92
Query: 110 LATSNAILHLLIA------LLVAHIPFYRLQNVMDEC-----------AIGFSGVIFSLI 152
IL ++ + +P + ++ + +G SG +++++
Sbjct: 93 TGVGAGILQEIVQFAQLYYMASEQLPAFSFSDIFEVAHNSSEVLNQWTTVGASGAVYAIL 152
Query: 153 VIETSLSGAQSRSVFGL-FNIPAKWYPL--ILLVLFQVLMT---NVSLLGHLCGILSGF 205
+ + + +F L I AKW+ + +++ LF L T +V+ HL G+L GF
Sbjct: 153 LAFGMIFPEERIFIFPLPIPIKAKWFVVGYVVIELFSALSTPGDSVAHFAHLGGMLFGF 211
>gi|402863172|ref|XP_003895905.1| PREDICTED: rhomboid domain-containing protein 2 [Papio anubis]
Length = 364
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Query: 54 LPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATS 113
L S + +QVYR T I + + + +L + + ER +G+VR + T++ A
Sbjct: 50 LKSEALRNWQVYRLVTYIFVYENPISLLCGAIIIWRFAGNFERTVGTVRHCFFTVIFAIF 109
Query: 114 NAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIP 173
+AI+ L + + +L V D A GF+ V F+++ + T S + VFG+ +P
Sbjct: 110 SAIIFLSFEAVSS---LSKLGEVED--ARGFTPVAFAMLGVTTVRSRMRRALVFGMV-VP 163
Query: 174 AKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAY 207
+ P +LL L+ S L ++CG+ G AY
Sbjct: 164 SVLVPWLLLGA-SWLIPQTSFLSNVCGLSIGLAY 196
>gi|395738284|ref|XP_002817870.2| PREDICTED: rhomboid domain-containing protein 2 [Pongo abelii]
Length = 364
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Query: 54 LPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATS 113
L S + +QVYR T I + + + +L + + ER +G+VR + T++ A
Sbjct: 50 LKSEALRNWQVYRLVTYIFVYENPISLLCGAIIIWRFAGNFERTVGTVRHCFFTVIFAIF 109
Query: 114 NAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIP 173
+AI+ L + + +L V D A GF+ V F+++ + T S + VFG+ +P
Sbjct: 110 SAIIFLSFEAVSS---LSKLGEVED--ARGFTPVAFAMLGVTTVRSRMRRALVFGMV-VP 163
Query: 174 AKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAY 207
+ P +LL L+ S L ++CG+ G AY
Sbjct: 164 SVLVPWLLLGA-SWLIPQTSFLSNVCGLSIGLAY 196
>gi|384563997|ref|ZP_10011101.1| putative membrane protein [Saccharomonospora glauca K62]
gi|384519851|gb|EIE97046.1| putative membrane protein [Saccharomonospora glauca K62]
Length = 330
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 73/158 (46%), Gaps = 21/158 (13%)
Query: 48 FYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYIT 107
F + P AV+ + +R TS H LLH+ NMLAL LG +LE ++G VR +
Sbjct: 140 FADGVLWPEAVVLIDEWWRLLTSGFLHYGLLHLAMNMLALWVLGRDLEMLLGRVRFLAVY 199
Query: 108 ILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVF 167
L + A +A+ V P G SG I+ L+ GA +V
Sbjct: 200 FLSMFAGA-----VAVFVLGEP--------GTATAGASGAIYGLM-------GAVLVAVL 239
Query: 168 GLFNIPAKWYPLILL-VLFQVLMTNVSLLGHLCGILSG 204
L P +I+L V + + N+SLLGHL G+++G
Sbjct: 240 RLRLNPTTAIAIIVLNVFLSMSIPNISLLGHLGGLVAG 277
>gi|302755222|ref|XP_002961035.1| hypothetical protein SELMODRAFT_28081 [Selaginella moellendorffii]
gi|302767114|ref|XP_002966977.1| hypothetical protein SELMODRAFT_17932 [Selaginella moellendorffii]
gi|300164968|gb|EFJ31576.1| hypothetical protein SELMODRAFT_17932 [Selaginella moellendorffii]
gi|300171974|gb|EFJ38574.1| hypothetical protein SELMODRAFT_28081 [Selaginella moellendorffii]
Length = 155
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 69/135 (51%), Gaps = 14/135 (10%)
Query: 47 SFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYI 106
S E+C P V+ F V R S +H H+ +NM++L+ G +LE MGS + +
Sbjct: 29 SIEEVCLSPYLVLRNFDVKRLLLSAFYHVDEAHLFYNMISLLWKGVQLEGRMGSPKFASM 88
Query: 107 TILLATSNAILHLLIALLVAHI-----PFYRLQNVMDECAIGFSGVIFSLIVIETSLSGA 161
LL + L +L+ LV+ + P+ CA+GFS ++F+L V+ S A
Sbjct: 89 VALLLGMSHGLMVLLGTLVSTLTDSPAPY-------TSCAVGFSALLFALKVVLNHNSPA 141
Query: 162 QSRSVFGLFNIPAKW 176
+ V+G F +PA++
Sbjct: 142 NA-IVYG-FVVPARF 154
>gi|329297360|ref|ZP_08254696.1| intramembrane serine protease GlpG [Plautia stali symbiont]
Length = 274
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 49/87 (56%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
T ++I C ++++ + G D P+ FQV+R+++ + H SLLH+LFN+
Sbjct: 95 LTLTMMIACVVVFILMQIVGDDVVLSWLAWPADSSQYFQVWRWFSHALLHFSLLHILFNL 154
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
+ LG +E+ +GS ++F I ++ A
Sbjct: 155 MWWWYLGGAVEKRLGSGKLFVIMLISA 181
>gi|310286649|ref|YP_003937907.1| rhomboid family protein [Bifidobacterium bifidum S17]
gi|311063542|ref|YP_003970267.1| hypothetical protein BBPR_0095 [Bifidobacterium bifidum PRL2010]
gi|309250585|gb|ADO52333.1| Rhomboid family protein [Bifidobacterium bifidum S17]
gi|310865861|gb|ADP35230.1| Conserved hypothetical membrane spanning protein ine rhomboid
family [Bifidobacterium bifidum PRL2010]
Length = 261
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 11/92 (11%)
Query: 17 QWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRF-------QVYRFYT 69
QW + P FTSA++I C ++++ ++F F+ + RF Q + F T
Sbjct: 27 QWRSNGPVFTSAIIIACVAVWVVEMVF--SLFWPLGLATMIYYGRFDPMTAVAQPWMFLT 84
Query: 70 SIVFHG--SLLHVLFNMLALVPLGSELERIMG 99
S+ H S+LH+LFNMLAL +G LE++MG
Sbjct: 85 SMFLHSPKSVLHILFNMLALWSVGPVLEKMMG 116
>gi|426356616|ref|XP_004045655.1| PREDICTED: rhomboid domain-containing protein 2 isoform 1 [Gorilla
gorilla gorilla]
Length = 364
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Query: 54 LPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATS 113
L S + +QVYR T I + + + +L + + ER +G+VR + T++ A
Sbjct: 50 LKSEALRNWQVYRLVTYIFVYENPISLLCGAIIIWRFAGNFERTVGTVRHCFFTVIFAIF 109
Query: 114 NAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIP 173
+AI+ L + + +L V D A GF+ V F+++ + T S + VFG+ +P
Sbjct: 110 SAIIFLSFEAVSS---LSKLGEVED--ARGFTPVAFAMLGVTTVRSRMRRALVFGMV-VP 163
Query: 174 AKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAY 207
+ P +LL L+ S L ++CG+ G AY
Sbjct: 164 SVLVPWLLLGA-SWLIPQTSFLSNVCGLSIGLAY 196
>gi|456012071|gb|EMF45791.1| Rhomboid family protein [Planococcus halocryophilus Or1]
Length = 202
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 74/147 (50%), Gaps = 15/147 (10%)
Query: 59 ISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILH 118
I+ Q +RF+T + H ++H+LFNM +L G ELER+ G +R +ITI
Sbjct: 52 IAEGQWWRFFTPMFLHSGVMHLLFNMFSLFLFGPELERLTGKIR--FITI---------- 99
Query: 119 LLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYP 178
L+A A Y LQ +D +G SG IF + +L R++ L I
Sbjct: 100 YLLAGFFASAATYFLQP-LDYSHVGASGAIFGVFGAFGALVYYGGRALPQLKQIILPIIV 158
Query: 179 LILLVLFQVLMTNVSLLGHLCGILSGF 205
+ +++ F L N+++ H+ G+++GF
Sbjct: 159 ISIVMTF--LTPNINVTAHIAGMITGF 183
>gi|383420245|gb|AFH33336.1| rhomboid domain-containing protein 2 isoform a [Macaca mulatta]
Length = 364
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Query: 54 LPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATS 113
L S + +QVYR T I + + + +L + + ER +G+VR + T++ A
Sbjct: 50 LKSEALRNWQVYRLVTYIFVYENPISLLCGAIIIWRFAGNFERTVGTVRHCFFTVIFAIF 109
Query: 114 NAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIP 173
+AI+ L + + +L V D A GF+ V F+++ + T S + VFG+ +P
Sbjct: 110 SAIIFLSFEAVSS---LSKLGEVED--ARGFTPVAFAMLGVTTVRSRMRRALVFGMV-VP 163
Query: 174 AKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAY 207
+ P +LL L+ S L ++CG+ G AY
Sbjct: 164 SVLVPWLLLGA-SWLIPQTSFLSNVCGLSIGLAY 196
>gi|390935996|ref|YP_006393555.1| membrane spanning protein [Bifidobacterium bifidum BGN4]
gi|389889609|gb|AFL03676.1| membrane spanning protein [Bifidobacterium bifidum BGN4]
Length = 290
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 11/92 (11%)
Query: 17 QWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRF-------QVYRFYT 69
QW + P FTSA++I C ++++ ++F F+ + RF Q + F T
Sbjct: 56 QWRSNGPVFTSAIIIACVAVWVVEMVF--SLFWPLGLATMIYYGRFDPMTAVAQPWMFLT 113
Query: 70 SIVFHG--SLLHVLFNMLALVPLGSELERIMG 99
S+ H S+LH+LFNMLAL +G LE++MG
Sbjct: 114 SMFLHSPKSVLHILFNMLALWSVGPVLEKMMG 145
>gi|340358738|ref|ZP_08681246.1| rhomboid family protein [Actinomyces sp. oral taxon 448 str. F0400]
gi|339885875|gb|EGQ75566.1| rhomboid family protein [Actinomyces sp. oral taxon 448 str. F0400]
Length = 280
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 79/179 (44%), Gaps = 16/179 (8%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T +V+ C +YLI L F+P+A IS + +RF T+ H SL H+ FNM
Sbjct: 77 TKILVVACVAVYLIQLTH-QPLENRFAFVPAAAIS--EPWRFVTTAFLHASLWHLAFNMW 133
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
AL LGS LE ++G R + +L A + + +A V ++ L +G S
Sbjct: 134 ALWVLGSALEPVLGRWRFAALYVLSAVGGSTMIYWLASPVTMSSWWGLT-------VGAS 186
Query: 146 GVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSG 204
G +F L + R G+ + L + + + +S GHL G+ +G
Sbjct: 187 GAVFGLFAALFIIQHRFGRDTSGILGL------LAVNLAISFMGEYISWQGHLGGLATG 239
>gi|338975122|ref|ZP_08630477.1| integral membrane protein [Bradyrhizobiaceae bacterium SG-6C]
gi|338231721|gb|EGP06856.1| integral membrane protein [Bradyrhizobiaceae bacterium SG-6C]
Length = 256
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 15/115 (13%)
Query: 21 SIPFFTSAVVIVCGTIY----LICLLFGYDSFYEICFLP-----SAVISRF------QVY 65
+IPF +AV++V ++ L+ L + + F+P S + +F +++
Sbjct: 13 TIPFAMTAVIVVMAAVHGLRALLPLATDQEVIWTFGFVPARYDASVLAGKFPGGVGAEIW 72
Query: 66 RFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLL 120
F T H + H+ FNML ++P GS + R G+VR F + A + A+ HL+
Sbjct: 73 TFLTYAFLHADITHIAFNMLWMLPFGSAVARRFGTVRFFAFFAVTAIAGAVAHLV 127
>gi|421736632|ref|ZP_16175407.1| membrane spanning protein [Bifidobacterium bifidum IPLA 20015]
gi|407296077|gb|EKF15684.1| membrane spanning protein [Bifidobacterium bifidum IPLA 20015]
Length = 254
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 11/92 (11%)
Query: 17 QWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRF-------QVYRFYT 69
QW + P FTSA++I C ++++ ++F F+ + RF Q + F T
Sbjct: 20 QWRSNGPVFTSAIIIACVAVWVVEMVF--SLFWPLGLATMIYYGRFDPMTAVAQPWMFLT 77
Query: 70 SIVFHG--SLLHVLFNMLALVPLGSELERIMG 99
S+ H S+LH+LFNMLAL +G LE++MG
Sbjct: 78 SMFLHSPKSVLHILFNMLALWSVGPVLEKMMG 109
>gi|282880538|ref|ZP_06289245.1| peptidase, S54 (rhomboid) family protein [Prevotella timonensis
CRIS 5C-B1]
gi|281305641|gb|EFA97694.1| peptidase, S54 (rhomboid) family protein [Prevotella timonensis
CRIS 5C-B1]
Length = 305
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 75/168 (44%), Gaps = 20/168 (11%)
Query: 58 VISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAIL 117
+ S F++Y+ +T + H S H+ FNM AL G +ER+ G + + + +
Sbjct: 41 IASDFRIYQLFTYMFMHASFEHLFFNMFALWMFGCVVERVWGPKKFLFFYLTCGVGAGLF 100
Query: 118 HLLI---ALLVAHIPFYR------LQNVMDE-----CAIGFSGVIFSLIVIETSLSGAQS 163
+ + LV +P Y L+ MDE +G SG ++ L++ + +
Sbjct: 101 QEMAQYGSFLVEGLPAYDSVQLEGLRISMDEFLNRWTTVGASGAVYGLLLAFGMIFPEER 160
Query: 164 RSVFGL-FNIPAKWYPLI-----LLVLFQVLMTNVSLLGHLCGILSGF 205
+F L I AKW+ ++ L++ NV+ HL G++ GF
Sbjct: 161 IFIFPLPIPIKAKWFVILYAGISLVMALTTTGGNVAHFAHLGGMVVGF 208
>gi|149191752|ref|ZP_01869991.1| GlpG protein [Vibrio shilonii AK1]
gi|148834394|gb|EDL51392.1| GlpG protein [Vibrio shilonii AK1]
Length = 277
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 91/182 (50%), Gaps = 21/182 (11%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T +++++C I+++ L ++ + P+ ++Q++R++T + H S LH++FN+L
Sbjct: 100 TLSIMLICSVIFILQQLGWGEAIFASLHFPALDGQQWQIWRWFTHALLHFSALHIIFNLL 159
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG ++E+ +GS+++ I LI+ V+ Y ++ G S
Sbjct: 160 WWWQLGGDIEKRLGSLKLIEI------------FLISAAVSGTGQYWVEGA---NFGGLS 204
Query: 146 GVIFSLIVIETSLSGAQSRSVFGL-FNIPAKWYPLILLVL--FQVLMTNVSLLGHLCGIL 202
GV+++L+ L+ R GL P + L+ L+L FQ + ++ + HL G+
Sbjct: 205 GVVYALVGYLWMLT--WKRPELGLIIQKPIVGFMLVWLILGFFQPFLA-IANMAHLTGLA 261
Query: 203 SG 204
SG
Sbjct: 262 SG 263
>gi|313139341|ref|ZP_07801534.1| conserved membrane protein [Bifidobacterium bifidum NCIMB 41171]
gi|313131851|gb|EFR49468.1| conserved membrane protein [Bifidobacterium bifidum NCIMB 41171]
Length = 254
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 11/92 (11%)
Query: 17 QWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRF-------QVYRFYT 69
QW + P FTSA++I C ++++ ++F F+ + RF Q + F T
Sbjct: 20 QWRSNGPVFTSAIIIACVAVWVVEMVF--SLFWPLGLATMIYYGRFDPLTAVAQPWMFLT 77
Query: 70 SIVFHG--SLLHVLFNMLALVPLGSELERIMG 99
S+ H S+LH+LFNMLAL +G LE++MG
Sbjct: 78 SMFLHSPKSVLHILFNMLALWSVGPVLEKMMG 109
>gi|444715566|gb|ELW56431.1| Rhomboid domain-containing protein 2 [Tupaia chinensis]
Length = 346
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Query: 54 LPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATS 113
L S + +QVYR T I + + + +L + + ER +G+VR + T++ A
Sbjct: 53 LKSEALRNWQVYRLVTYIFVYENPVSLLCGAIIIWRFAGNFERTVGTVRHCFFTLVFAVF 112
Query: 114 NAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIP 173
+AI+ L + + +L V D A GF+ V F+++ + T S + VFG+ +P
Sbjct: 113 SAIIFLSFEAVSS---LSKLGEVED--ARGFTPVAFAMLGVTTVRSRMRRALVFGMV-VP 166
Query: 174 AKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAY 207
+ P +LL L+ S L ++CG+ G AY
Sbjct: 167 SVLVPWLLLGA-SWLIPQTSFLSNVCGLSIGLAY 199
>gi|421733857|ref|ZP_16172952.1| membrane spanning protein [Bifidobacterium bifidum LMG 13195]
gi|407078230|gb|EKE51041.1| membrane spanning protein [Bifidobacterium bifidum LMG 13195]
Length = 254
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 11/92 (11%)
Query: 17 QWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRF-------QVYRFYT 69
QW + P FTSA++I C ++++ ++F F+ + RF Q + F T
Sbjct: 20 QWRSNGPVFTSAIIIACVAVWVVEMVF--SLFWPLGLATMIYYGRFDPMTAVAQPWMFLT 77
Query: 70 SIVFHG--SLLHVLFNMLALVPLGSELERIMG 99
S+ H S+LH+LFNMLAL +G LE++MG
Sbjct: 78 SMFLHSPKSVLHILFNMLALWSVGPVLEKMMG 109
>gi|170766588|ref|ZP_02901041.1| peptidase, S54 (rhomboid) family [Escherichia albertii TW07627]
gi|170124026|gb|EDS92957.1| peptidase, S54 (rhomboid) family [Escherichia albertii TW07627]
Length = 276
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 85/193 (44%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T AV+I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 97 TWAVMIACVLVFIAMQILGDQEVMLWLAWPFEPALKFEFWRYFTHALMHFSLMHILFNLL 156
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ ALL ++ Q G S
Sbjct: 157 WWWYLGGAVEKRLGSGKLIVIT-----------LISALLSGYVQ----QKFSGPWFGGLS 201
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 202 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFD-----LFGMSMANGA--- 253
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 254 HIAGLAVGLAMAF 266
>gi|421724622|ref|ZP_16163834.1| intramembrane serine protease GlpG [Klebsiella oxytoca M5al]
gi|410374621|gb|EKP29290.1| intramembrane serine protease GlpG [Klebsiella oxytoca M5al]
Length = 276
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 51/87 (58%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
FT +V+I C ++++ + G + P +F+V+R+++ + H SL+H+LFN+
Sbjct: 96 FTWSVLIACIAVFVLQTVIGDQPIMLLLAWPYDPSLKFEVWRYFSHALMHFSLMHILFNL 155
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
L LG +E+ +GS ++ IT++ A
Sbjct: 156 LWWWYLGGAVEKRIGSGKLVVITVISA 182
>gi|288926929|ref|ZP_06420827.1| rhomboid family protein [Prevotella buccae D17]
gi|288336288|gb|EFC74671.1| rhomboid family protein [Prevotella buccae D17]
Length = 314
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 92/214 (42%), Gaps = 28/214 (13%)
Query: 20 ESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICF-----LPSAVISRFQVYRFYTSIVFH 74
+IP T ++I+ ++ +L+G D++ E L + F +Y+ +T + H
Sbjct: 2 RNIPTITKNLLIINIAAFVATMLYGKDAYGEYLLNDTLGLHFFLAPDFHIYQLFTYMFMH 61
Query: 75 GSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLV------AHI 128
G H+LFNM AL G +E + G + + I + L + + I
Sbjct: 62 GGFEHILFNMFALWMFGCVVENVWGPKKFLFYYISCGVGAGLFQELAQFVQFYVVAGSSI 121
Query: 129 PFYRLQNVMDECA-----------IGFSGVIFSLIVIETSLSGAQSRSVFGL-FNIPAKW 176
P + L ++ A +G SG I+++++ + + +F L I AKW
Sbjct: 122 PGFSLSDIWAVAAANGASLNSWTTVGASGAIYAILLAFGMIFPEERIFIFPLPIPIKAKW 181
Query: 177 YPL--ILLVLFQVLMT---NVSLLGHLCGILSGF 205
+ + + LF + T V+ + HL G++ GF
Sbjct: 182 FVMGYAAIELFSAIATTGDGVAHIAHLGGMVFGF 215
>gi|387887558|ref|YP_006317856.1| inner membrane-associated protein of glp regulon [Escherichia
blattae DSM 4481]
gi|414593244|ref|ZP_11442891.1| rhomboid protease GlpG [Escherichia blattae NBRC 105725]
gi|386922391|gb|AFJ45345.1| inner membrane-associated protein of glp regulon [Escherichia
blattae DSM 4481]
gi|403195762|dbj|GAB80543.1| rhomboid protease GlpG [Escherichia blattae NBRC 105725]
Length = 277
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 48/87 (55%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
FT ++ VC ++L+ G P RF+++R+++ + H S+LH+ FN+
Sbjct: 97 FTLLIMAVCIVVWLLMQWVGNQQMMLWLAWPWDDSVRFELWRYFSHALLHFSVLHITFNL 156
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
L LG LE+ +GS ++F IT++ A
Sbjct: 157 LWWWYLGGPLEKRLGSGKLFVITVISA 183
>gi|323343528|ref|ZP_08083755.1| rhomboid family protein [Prevotella oralis ATCC 33269]
gi|323095347|gb|EFZ37921.1| rhomboid family protein [Prevotella oralis ATCC 33269]
Length = 311
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 91/214 (42%), Gaps = 30/214 (14%)
Query: 21 SIPFFTSAVVIVCGTIYLICLLFG---YDS-----FYEICFLPSAVISRFQVYRFYTSIV 72
+IP T ++I+ +++C+L+G YD I L F +Y+ +T +
Sbjct: 3 NIPTVTRNLLIINVVAFILCVLYGANVYDGVTVYRLNSILGLHFFFAPDFHIYQLFTYMF 62
Query: 73 FHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHI---- 128
H H+ FNML L G +ER+ G+ + + I + L + +
Sbjct: 63 MHAGFEHIFFNMLMLWMFGCVVERVWGAKKFLFYYICCGVGAGLFQELAQFMQFYFFTSN 122
Query: 129 --PFYRLQNVMDECA--------IGFSGVIFSLIVIETSLSGAQSRSVFGLFNIP--AKW 176
P ++ +G SG I++ I++ ++ ++ + F F IP AKW
Sbjct: 123 NYPGVEFTTIVKAAGSALNGWTTVGASGAIYA-ILLAFGMTFSEEKMFFFPFPIPIKAKW 181
Query: 177 YPLI-----LLVLFQVLMTNVSLLGHLCGILSGF 205
+ +I L + F +V+ + HL G++ GF
Sbjct: 182 FVVICAGIELFLSFTSTGDHVAHVAHLGGMIFGF 215
>gi|83767438|dbj|BAE57577.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391867332|gb|EIT76578.1| hypothetical protein Ao3042_07303 [Aspergillus oryzae 3.042]
Length = 254
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 90/230 (39%), Gaps = 34/230 (14%)
Query: 13 TRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIV 72
R + +P FT VV+ +L+ L + P I +YR T
Sbjct: 15 ARVRSYLLRLPLFTRLVVLAIIVFWLLELQTVWSVVQWGALAPDE-IGFGSMYRLNTYPF 73
Query: 73 FHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITI-LLATSNAILHLLIALLVAHIPFY 131
H H N++AL PL E G++ + + L+T A L+LL+ + H
Sbjct: 74 IHNGFFHAFLNLVALTPLVERFEAEHGTLTAVALFLGPLSTFPAGLYLLVEKFLLH---- 129
Query: 132 RLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTN 191
+N T++ GA G + IP PL ++ +LM+N
Sbjct: 130 --RN--------------------TAVLGAS----LGNYKIPTWTSPLFACIVVSILMSN 163
Query: 192 VSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFI 241
S LGHLC IL G+ + G+ + +P IE L+ R P ++
Sbjct: 164 TSFLGHLCAILIGYLFGLGYLKVFVPPEKVLRWIEGK--LNLLGRLPHYV 211
>gi|238799344|ref|ZP_04642784.1| Rhomboid protease glpG [Yersinia mollaretii ATCC 43969]
gi|238716812|gb|EEQ08688.1| Rhomboid protease glpG [Yersinia mollaretii ATCC 43969]
Length = 278
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 50/87 (57%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
T +V+++C IY++ +FG ++ P Q++R+ + H SLLH+LFN+
Sbjct: 97 LTLSVMMLCIAIYILMQIFGDNTVMSWLAWPRDESQYLQIWRWISPAFLHFSLLHILFNL 156
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
+ LG ++E+ +G+ ++ +TI+ A
Sbjct: 157 MWWWYLGGQMEKRLGTGKLLVLTIVSA 183
>gi|315607054|ref|ZP_07882058.1| rhomboid family protein [Prevotella buccae ATCC 33574]
gi|315251108|gb|EFU31093.1| rhomboid family protein [Prevotella buccae ATCC 33574]
Length = 339
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 98/229 (42%), Gaps = 34/229 (14%)
Query: 5 IVSEAGLSTRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICF-----LPSAVI 59
++S G S R +IP T ++I+ ++ +L+G D++ E L +
Sbjct: 18 LLSAKGKSMR------NIPTITKNLLIINIAAFVATMLYGKDAYGEYLLNDTLGLHFFLA 71
Query: 60 SRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHL 119
F +Y+ +T + HG H+LFNM AL G +E + G + + I +
Sbjct: 72 PDFHIYQLFTYMFMHGGFEHILFNMFALWMFGCVVENVWGPKKFLFYYISCGVGAGLFQE 131
Query: 120 LIALLVAH------IPFYRLQNVMDECA-----------IGFSGVIFSLIVIETSLSGAQ 162
L + + IP + L ++ A +G SG I+++++ + +
Sbjct: 132 LAQFVQFYVVAGSSIPGFSLSDIWAVAAANGASLNSWTTVGASGAIYAILLAFGMIFPEE 191
Query: 163 SRSVFGL-FNIPAKWYPL--ILLVLFQVLMT---NVSLLGHLCGILSGF 205
+F L I AKW+ + + LF + T V+ + HL G++ GF
Sbjct: 192 RIFIFPLPIPIKAKWFVMGYAAIELFSAIATTGDGVAHIAHLGGMVFGF 240
>gi|161505916|ref|YP_001573028.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:- str. RSK2980]
gi|189041237|sp|A9MMA7.1|GLPG_SALAR RecName: Full=Rhomboid protease GlpG; AltName: Full=Intramembrane
serine protease
gi|160867263|gb|ABX23886.1| hypothetical protein SARI_04097 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 276
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 85/193 (44%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T V++ C +Y+ L G + P +F+ +R++T I H SL+H+LFN+L
Sbjct: 97 TWTVMVACVLVYIAMNLVGDQTVMVWLAWPFDPALKFEFWRYFTHIFMHFSLMHILFNLL 156
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT+ + ALL ++ Q G S
Sbjct: 157 WWWYLGGAVEKRLGSGKLIVITV-----------ISALLSGYVQ----QKFSGPWFGGLS 201
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W L F + M N +
Sbjct: 202 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALLWIVAGW-----LDWFGMSMANGA--- 253
Query: 197 HLCGILSGFAYTY 209
H+ G++ G A +
Sbjct: 254 HIAGLIVGLAMAF 266
>gi|239637639|ref|ZP_04678611.1| rhomboid family protein [Staphylococcus warneri L37603]
gi|239596857|gb|EEQ79382.1| rhomboid family protein [Staphylococcus warneri L37603]
Length = 484
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 81/190 (42%), Gaps = 31/190 (16%)
Query: 29 VVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSLLHVLFN 83
++I+ +C++ ++ F +I L + F V YR TS+ H + H+L N
Sbjct: 162 ILIISNVALWLCMILYFNRFSDIKLLDVGGLVHFNVVHGEWYRLVTSMFLHYNFEHILMN 221
Query: 84 MLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHI--PFYRLQNVMDECA 141
ML+L G +E ++GS +M I L A I F L +
Sbjct: 222 MLSLYIFGKIVESVLGSWKMLAI----------------YLFAGIFGNFVSLSFNTTTIS 265
Query: 142 IGFSGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHL 198
+G SG IF L I LS + V G I L++L+ + M+N++++ HL
Sbjct: 266 VGASGAIFGLIGSIFAILYLSKTFDKKVIGQLLI-----ALVILIGLSLFMSNINVMAHL 320
Query: 199 CGILSGFAYT 208
G + G T
Sbjct: 321 GGFVGGLLIT 330
>gi|335307357|ref|XP_003124448.2| PREDICTED: rhomboid domain-containing protein 2-like [Sus scrofa]
Length = 460
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 7/154 (4%)
Query: 54 LPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATS 113
L S + +QVYR T I + + + +L + + ER +G+VR + T++ A
Sbjct: 154 LRSEALRNWQVYRLVTYIFVYENPVSLLCGAIIIWRFAGNFERTVGTVRHCFFTVIFALC 213
Query: 114 NAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIP 173
+AI+ L + +L V D A GF+ V F+++ + + + + VFG+ +P
Sbjct: 214 SAIIFLSFEAVSK---LSKLGEVED--ARGFTPVAFAMLGVNSVRARMRRALVFGMV-VP 267
Query: 174 AKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAY 207
+ P +LL L+ S L ++CG+ G AY
Sbjct: 268 SMLVPWLLLCA-SWLIPQTSFLSNVCGLGIGLAY 300
>gi|283787942|ref|YP_003367807.1| hypothetical protein ROD_44001 [Citrobacter rodentium ICC168]
gi|282951396|emb|CBG91095.1| putative membrane protein [Citrobacter rodentium ICC168]
Length = 276
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 83/188 (44%), Gaps = 32/188 (17%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T ++ +C ++++ L GY + P +F+V+R++T H SL+H+LFN+L
Sbjct: 97 TWFIMALCVLVFIVQSLIGYQTVMAWLAWPFDPSLKFEVWRYFTHAFMHFSLMHILFNLL 156
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT++ A + Y Q G S
Sbjct: 157 WWWYLGGAVEKRLGSGKLIVITVISALLSG---------------YVQQKFSGPWFGGLS 201
Query: 146 GVIFSLI------VIETSLSGAQSRS---VFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ + SG + VF L I A W+ LF + M N +
Sbjct: 202 GVVYALMGYVWLRGVRDPQSGIYLQGGLIVFALIWIVAGWFD-----LFGMSMANGA--- 253
Query: 197 HLCGILSG 204
H+ G+ G
Sbjct: 254 HIAGLAVG 261
>gi|340001053|ref|YP_004731937.1| hypothetical protein SBG_3125 [Salmonella bongori NCTC 12419]
gi|339514415|emb|CCC32178.1| putative membrane protein [Salmonella bongori NCTC 12419]
Length = 276
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 86/193 (44%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T +V+ C +Y++ L G + P +F+ +R++T I H SL+H+LFN+L
Sbjct: 97 TWSVMAACVLVYVVMNLVGDQTAMVWLAWPFDPALKFEFWRYFTHIFMHFSLMHILFNLL 156
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT+ + ALL ++ Q G S
Sbjct: 157 WWWYLGGAVEKRLGSGKLIVITV-----------ISALLSGYVQ----QKFSGPWFGGLS 201
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ F + M N +
Sbjct: 202 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALLWIVAGWFD-----WFGMSMANGA--- 253
Query: 197 HLCGILSGFAYTY 209
H+ G++ G A +
Sbjct: 254 HIAGLVVGLAMAF 266
>gi|402304909|ref|ZP_10823972.1| peptidase, S54 family [Prevotella sp. MSX73]
gi|400380695|gb|EJP33508.1| peptidase, S54 family [Prevotella sp. MSX73]
Length = 339
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 98/229 (42%), Gaps = 34/229 (14%)
Query: 5 IVSEAGLSTRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICF-----LPSAVI 59
++S G S R +IP T ++I+ ++ +L+G D++ E L +
Sbjct: 18 LLSAKGKSMR------NIPTITKNLLIINIAAFVATMLYGKDAYGEYLLNDTLGLHFFLA 71
Query: 60 SRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHL 119
F +Y+ +T + HG H+LFNM AL G +E + G + + I +
Sbjct: 72 PDFHIYQLFTYMFMHGGFEHILFNMFALWMFGCVVENVWGPKKFLFYYISCGVGAGLFQE 131
Query: 120 LIALLVAH------IPFYRLQNVMDECA-----------IGFSGVIFSLIVIETSLSGAQ 162
L + + IP + L ++ A +G SG I+++++ + +
Sbjct: 132 LAQFVQFYVVAGSSIPGFSLSDIWAVAAANGASLNSWTTVGASGAIYAILLAFGMIFPEE 191
Query: 163 SRSVFGL-FNIPAKWYPL--ILLVLFQVLMT---NVSLLGHLCGILSGF 205
+F L I AKW+ + + LF + T V+ + HL G++ GF
Sbjct: 192 RIFIFPLPIPIKAKWFVMGYAAIELFSAIATTGDGVAHIAHLGGMVFGF 240
>gi|284008809|emb|CBA75567.1| conserved hypothetical protein [Arsenophonus nasoniae]
Length = 265
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 36 IYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELE 95
IY+ L+ G D+ PS+ I +++R +T + H SL+H+LFN++ LGS++E
Sbjct: 91 IYIWMLISGNDAVMAYLAWPSS-IQYTEIWRIFTPALLHFSLMHILFNLMWWWYLGSQVE 149
Query: 96 RIMGSVRMFYITILLA 111
R +G+ ++F ITI+ A
Sbjct: 150 RQLGTGKLFVITIVSA 165
>gi|317049913|ref|YP_004117561.1| rhomboid protease [Pantoea sp. At-9b]
gi|316951530|gb|ADU71005.1| Rhomboid protease [Pantoea sp. At-9b]
Length = 276
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 58/109 (53%), Gaps = 4/109 (3%)
Query: 7 SEAGLSTRANQWWESIPF----FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRF 62
+E+GL + W +I T +++ C ++++ + G ++ P F
Sbjct: 74 TESGLRYERSNIWANIRERAGPLTMTMMMACVAVFILMQVVGDETMLGWLGWPDGPQQYF 133
Query: 63 QVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLA 111
QV+R+++ + H SLLH+LFN++ LG +E+ +GS ++F I ++ A
Sbjct: 134 QVWRWFSHALLHFSLLHILFNLMWWWYLGGAVEKRLGSGKLFVIMLISA 182
>gi|408679359|ref|YP_006879186.1| putative membrane protein [Streptomyces venezuelae ATCC 10712]
gi|328883688|emb|CCA56927.1| putative membrane protein [Streptomyces venezuelae ATCC 10712]
Length = 294
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 89/203 (43%), Gaps = 36/203 (17%)
Query: 24 FFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSA---------VISRFQVYRFYTSIVFH 74
F T ++ V +YL L+FG E+ + A ++ + YR TS V H
Sbjct: 82 FVTKILIGVNLAVYLAVLVFGDRLVDELVLIGYAWSPALGEVVGVADGEWYRLLTSTVLH 141
Query: 75 GSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQ 134
+ H+LFN+L L +G +E +G +R + +L S ++L ++A
Sbjct: 142 QEVWHILFNVLGLWVIGGIVEPELGRIRYAALCLLSGLSGSVLAYVVA------------ 189
Query: 135 NVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMT---- 190
++ ++G SGV++ LI L+ + + P+IL V +L+T
Sbjct: 190 -EPNQPSLGASGVVYGLIGAWVVLARRRRHDM----------RPVILFVALSLLITFTRP 238
Query: 191 NVSLLGHLCGILSGFAYTYGFFN 213
+S H+ G+++G TY +
Sbjct: 239 GISWEAHVGGLVAGVLVTYALVH 261
>gi|334702540|ref|ZP_08518406.1| GlpG protein [Aeromonas caviae Ae398]
Length = 288
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 90/189 (47%), Gaps = 22/189 (11%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPS-AVISRFQVYRFYTSIVFHGSLLHVLFN 83
T V+I C IY + + G F E+ F P+ A + +Q +R+ T H S+LH++FN
Sbjct: 110 LTLVVIIACLAIYALDAI-GLPIFDELAFHPTLAQFTDWQAWRYVTPAFIHFSVLHLVFN 168
Query: 84 MLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIG 143
+L LG ++E+ +GS ++F + I+ A I ++ P + G
Sbjct: 169 LLWWWYLGGQIEQRLGSGKLFILLIVGAALPNIAEFFVS-----GPRFG----------G 213
Query: 144 FSGVIFSLIVIETSLSGAQSRSVFGLFNIPA-KWYPLILLVL--FQVLMTNVSLLGHLCG 200
SGV+++L+ + Q GL PA + L+ LVL +L T + + HL G
Sbjct: 214 LSGVVYALLGYSWLRTRLQPDC--GLAMPPALMGFMLVWLVLGFLDMLGTPTANMAHLVG 271
Query: 201 ILSGFAYTY 209
+L G A +
Sbjct: 272 LLVGLAQGW 280
>gi|408530693|emb|CCK28867.1| integral membrane protein [Streptomyces davawensis JCM 4913]
Length = 296
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 86/207 (41%), Gaps = 40/207 (19%)
Query: 23 PFFTSAVVI-VCGTIYLICLLFGYDSFYE-ICFLPSAVISRF---------QVYRFYTSI 71
P + ++I C YL+ + G DSF + + A + F Q YR TS+
Sbjct: 81 PHLVTKILIGACLAAYLVQMAVG-DSFTDNFSLIGQAYVPHFGDVEGVAEGQSYRLLTSM 139
Query: 72 VFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFY 131
HGS++H+LFNML+L LG LE +G R + + + + L L+A
Sbjct: 140 FLHGSVIHLLFNMLSLWWLGGPLEAALGRARYLALYFVSGLAGSALAYLLA--------- 190
Query: 132 RLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMT- 190
+ +G SG IF L L + + P+I L+ ++ T
Sbjct: 191 ----EPNTATLGASGAIFGLFGATAVL----------MRRLNYDMRPIIALLAINLIFTF 236
Query: 191 ----NVSLLGHLCGILSGFAYTYGFFN 213
N+S H+ G+++G YG +
Sbjct: 237 SPGFNISWQAHIGGLVAGVVIGYGMVH 263
>gi|109896395|ref|YP_659650.1| rhomboid-like protein [Pseudoalteromonas atlantica T6c]
gi|109698676|gb|ABG38596.1| Rhomboid-like protein [Pseudoalteromonas atlantica T6c]
Length = 292
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 96/194 (49%), Gaps = 22/194 (11%)
Query: 20 ESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLP-SAVISRFQVYRFYTSIVFHGSLL 78
IPF T++V++ C +YL+ ++ + + + P ++ Q +R + H S+L
Sbjct: 103 RDIPF-TTSVLLTCMIVYLLAMVGFFWPYKVLAIEPLPQLMENHQWWRLIGPALIHFSVL 161
Query: 79 HVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMD 138
H++FN+L LG ++ER++G + I+L S+A+L + LLV+ F
Sbjct: 162 HIVFNLLWWWTLGGQIERLLGKTTL----IILFLSSALLSNVGQLLVSGEHFG------- 210
Query: 139 ECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFN-IPAKWYPLILLVL--FQVLMTNVSLL 195
G SGV+++L+ L R +GL P + L+ LV+ VL +++
Sbjct: 211 ----GLSGVVYALVGCVWWLGWL--RPSWGLMMPKPMVGFLLVWLVVGYADVLWVSMANT 264
Query: 196 GHLCGILSGFAYTY 209
H G++SG A+ +
Sbjct: 265 AHTVGLISGCAFAF 278
>gi|262200065|ref|YP_003271273.1| rhomboid family protein [Gordonia bronchialis DSM 43247]
gi|262083412|gb|ACY19380.1| Rhomboid family protein [Gordonia bronchialis DSM 43247]
Length = 303
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 103/230 (44%), Gaps = 41/230 (17%)
Query: 1 MRPNIVSEAGLSTRANQWWESI----PFFTSAVVIVCGTIYLICLLF------GYDSFYE 50
+R + + ++ +T +W ++ P+ T A++++ ++ +C+ G +
Sbjct: 51 LRNDGIQQSTATTPRRRWSSAVAGDTPYVTYALIVINLIVFGLCVAEAGITNPGNAALMS 110
Query: 51 ICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMF--YITI 108
L ++ + +R T+ H S++HV NM++L +G +LER +G+ R Y+
Sbjct: 111 DGSLVKGIVGEGEYWRLLTAGFLHFSVMHVAVNMISLYIIGRDLERALGTYRYLAVYLIS 170
Query: 109 LLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFG 168
LL S A++ + NV G SG I+ LI GA V
Sbjct: 171 LLGGSAAVM------------LFEADNVQTA---GASGAIYGLI-------GAMLVIVLK 208
Query: 169 LFNIPAKWYPLILLVLFQVLMT----NVSLLGHLCGILSGFAYTYGFFNL 214
+PA P+++++ F V+++ +SL+ HL G+ G A T L
Sbjct: 209 -ARVPAT--PVLVIIGFNVVLSVSLPGISLMAHLGGLAFGVAATAAIVYL 255
>gi|260906986|ref|ZP_05915308.1| Rhomboid family protein [Brevibacterium linens BL2]
Length = 235
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 96/199 (48%), Gaps = 20/199 (10%)
Query: 21 SIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHG--SLL 78
S P TS ++I+ G ++L LL D + + F+P+ V+ Q +R + + H S
Sbjct: 19 SPPLVTSIIMILTGVVFLAQLLPSLDLVHRLSFVPALVLE--QPWRVLSVALVHEQPSPF 76
Query: 79 HVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMD 138
H+L NM+ L GS +ER +G R I +L +++ L++A PF + V +
Sbjct: 77 HLLANMIGLFFFGSFIERALGRWRFLTIYLLGTVGGSVMVLVLA-----KPF-TVDWVTN 130
Query: 139 ECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHL 198
IG SG +F+++ + + R++ G+ A + + L+ VS HL
Sbjct: 131 N--IGASGAVFAIVGVLLVPTQKLDRNITGVVLFVALNFG------YGFLVAGVSWQAHL 182
Query: 199 CGILSGFAYTYGFFNLLMP 217
G+++GF G LL+P
Sbjct: 183 GGLIAGFVLGCG--ALLVP 199
>gi|355716390|gb|AES05596.1| rhomboid domain containing 2 [Mustela putorius furo]
Length = 389
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 77/158 (48%), Gaps = 9/158 (5%)
Query: 54 LPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATS 113
L S + +QVYR T I + + + +L + + ER +G+VR + T++ A
Sbjct: 75 LRSEALRNWQVYRLVTYIFVYENPVSLLCGAIVIWRFAGNFERTVGTVRHCFFTVIFAIF 134
Query: 114 NAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIP 173
+AI+ L + + +L V D A GF+ V F+++ + + S + VFG+ +P
Sbjct: 135 SAIIFLSFEAVSS---LSKLGEVED--ARGFTPVAFAMLGVNSVRSRMRRALVFGVV-VP 188
Query: 174 AKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGF 211
+ P +LL L+ S L ++CG+ G TYG
Sbjct: 189 SMLVPWLLLCA-SWLIPQTSFLSNVCGL--GIGLTYGL 223
>gi|410627818|ref|ZP_11338551.1| GlpG protein [Glaciecola mesophila KMM 241]
gi|410152573|dbj|GAC25320.1| GlpG protein [Glaciecola mesophila KMM 241]
Length = 292
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 98/198 (49%), Gaps = 30/198 (15%)
Query: 20 ESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLP-SAVISRFQVYRFYTSIVFHGSLL 78
IPF T++V++ C +YL+ ++ + + + P + ++ Q +R + H S+L
Sbjct: 103 HDIPF-TTSVLLTCMIVYLLAMVGFFWPYKVLAIEPLTQLMENHQWWRLIGPALIHFSVL 161
Query: 79 HVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMD 138
H++FN+L LG ++ER++G + I+L S+A+L + LLV+ F
Sbjct: 162 HIVFNLLWWWTLGGQIERLLGKTTL----IILFLSSALLSNVGQLLVSGEHFG------- 210
Query: 139 ECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLI--LLVLF-----QVLMTN 191
G SGV+++L+ L R +GL +P PLI LLV +L +
Sbjct: 211 ----GLSGVVYALVGCVWWL--GWLRPSWGLM-MPK---PLIGFLLVWLVVGYADILWVS 260
Query: 192 VSLLGHLCGILSGFAYTY 209
++ H G++SG A+ +
Sbjct: 261 MANTAHTVGLISGCAFAF 278
>gi|72163467|ref|YP_291124.1| rhomboid family protein [Thermobifida fusca YX]
gi|71917199|gb|AAZ57101.1| Rhomboid family protein [Thermobifida fusca YX]
Length = 298
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 49/103 (47%), Gaps = 14/103 (13%)
Query: 49 YEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITI 108
YE AV++ Q YR T + HG L+H+ FN AL LG +LER +G +R +
Sbjct: 112 YEFGMWGGAVLAWHQWYRLLTGVFLHGGLMHLAFNGFALYVLGPQLERWLGHLRYAALWG 171
Query: 109 LLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSL 151
+ A ++L LL+ VM +G SG IF L
Sbjct: 172 VSALGGSVLGLLVQ-----------PTVMS---VGASGAIFGL 200
>gi|345801162|ref|XP_546933.2| PREDICTED: rhomboid domain-containing protein 2 isoform 1 [Canis
lupus familiaris]
Length = 363
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Query: 54 LPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATS 113
L S + +QVYR T I + + + +L + + ER +G+VR + T++ A
Sbjct: 50 LRSEALRNWQVYRLVTYIFVYENPISLLCGAIIIWRFAGNFERTVGTVRHCFFTVIFAIF 109
Query: 114 NAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIP 173
+AI+ L + + +L V D A GF+ V F+++ + + S + VFG+ +P
Sbjct: 110 SAIIFLSFEAVSS---LSKLGEVED--ARGFTPVAFAMLGVNSVRSRMRRALVFGMV-VP 163
Query: 174 AKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAY 207
+ P +LL L+ S L ++CG+ G AY
Sbjct: 164 SMLVPWLLLCA-SWLIPQTSFLSNVCGLGIGLAY 196
>gi|423142032|ref|ZP_17129670.1| peptidase, S54 family protein [Salmonella enterica subsp. houtenae
str. ATCC BAA-1581]
gi|379049961|gb|EHY67854.1| peptidase, S54 family protein [Salmonella enterica subsp. houtenae
str. ATCC BAA-1581]
Length = 274
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 85/193 (44%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T V+I C +Y+ + G + P +F+ +R++T I H SL+H+LFN+L
Sbjct: 95 TWMVMIACVLVYIAMNIVGDQTVMVWLAWPFDPALKFEFWRYFTHIFMHFSLMHILFNLL 154
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT+ + ALL +I Q G S
Sbjct: 155 WWWYLGGAVEKRLGSGKLIVITV-----------ISALLSGYIQ----QKFSGPWFGGLS 199
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W L F + M N +
Sbjct: 200 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALLWIVAGW-----LDWFGMSMANGA--- 251
Query: 197 HLCGILSGFAYTY 209
H+ G++ G A +
Sbjct: 252 HIAGLIVGLAMAF 264
>gi|302559651|ref|ZP_07311993.1| rhomboid family protein [Streptomyces griseoflavus Tu4000]
gi|302477269|gb|EFL40362.1| rhomboid family protein [Streptomyces griseoflavus Tu4000]
Length = 295
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 75/173 (43%), Gaps = 43/173 (24%)
Query: 53 FLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLAT 112
FLP+ ++ + YR +TS+ H + H+ FNML+L LG LE+ +G VR Y+T+ L +
Sbjct: 121 FLPTQGVAEGEWYRLFTSMFTHQEIWHIAFNMLSLWWLGGPLEQALGRVR--YLTLYLIS 178
Query: 113 SNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNI 172
A G + L+ T+ S S ++FGLF
Sbjct: 179 GLA-----------------------------GGALTYLLASGTTASLGASGAIFGLFGA 209
Query: 173 PA--------KWYPLILLVLFQVLMT----NVSLLGHLCGILSGFAYTYGFFN 213
A P+I L++ ++ T N++ H+ G+++G Y +
Sbjct: 210 TAVLMRRLNYDMRPVIALLVINLIFTFGWSNIAWQAHIGGLVAGVVIGYAMVH 262
>gi|115379487|ref|ZP_01466582.1| rhomboid family protein [Stigmatella aurantiaca DW4/3-1]
gi|310822642|ref|YP_003955000.1| rhomboid family protein [Stigmatella aurantiaca DW4/3-1]
gi|115363496|gb|EAU62636.1| rhomboid family protein [Stigmatella aurantiaca DW4/3-1]
gi|309395714|gb|ADO73173.1| Rhomboid family protein [Stigmatella aurantiaca DW4/3-1]
Length = 236
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 64/148 (43%), Gaps = 23/148 (15%)
Query: 58 VISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAIL 117
+I + Q +R T HG +H+LFNM A LG LER +GS R ++++ +A
Sbjct: 72 LIQQGQPWRVLTYAFEHGGPIHLLFNMSAAFTLGPSLERAIGSWRFLGLSLVTCVGSAAF 131
Query: 118 HLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWY 177
LL D+ +G SG+I + ++ +R GL+
Sbjct: 132 ALLFDF--------------DQPTVGASGMILGWLGALLPIAPGYTRRQLGLW------- 170
Query: 178 PLILLVLFQVLMTNVSLLGHLCGILSGF 205
+L + L+ VS GHL G+L G
Sbjct: 171 --LLQIALISLIPGVSWAGHLGGVLFGL 196
>gi|405979365|ref|ZP_11037709.1| hypothetical protein HMPREF9241_00432 [Actinomyces turicensis
ACS-279-V-Col4]
gi|404392746|gb|EJZ87804.1| hypothetical protein HMPREF9241_00432 [Actinomyces turicensis
ACS-279-V-Col4]
Length = 284
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 78/155 (50%), Gaps = 22/155 (14%)
Query: 63 QVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITI-LLATSNAILHLLI 121
QV+RF T+ H +H+ FNMLAL +G ELE+++G R Y+++ LL+ A L +L
Sbjct: 104 QVWRFLTTAFLHSGFMHIAFNMLALYSVGVELEQVLGRTR--YLSVYLLSAIGASLFVLA 161
Query: 122 ALLVAHIPFYRLQNVMDECAIGFSGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYP 178
+L+ + + +G SG +F L + + SG +R A
Sbjct: 162 WVLIQ-------PSSLGTVTVGASGAVFGLFGAMFVLQKQSGMDTR---------AVVGL 205
Query: 179 LILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFN 213
L++ +L ++ NVS GH+ G+ +G T+ ++
Sbjct: 206 LLVNLLIGFIVPNVSWQGHVGGLATGALATWIYWR 240
>gi|317030716|ref|XP_001393177.2| rhomboid protein 2 [Aspergillus niger CBS 513.88]
Length = 270
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 94/232 (40%), Gaps = 16/232 (6%)
Query: 13 TRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIV 72
+R + +P FT V++ +L+ L + +P V +YR T
Sbjct: 15 SRVRSYVLRLPLFTRLVLLAIIVFWLLELQTIWSVVQWGSVIPEEV-GFGTMYRLNTYPF 73
Query: 73 FHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITI-LLATSNAILHLLIALLVAHIPFY 131
H H N+LAL PL E G++ + I L+T A +++LI V H
Sbjct: 74 IHLGFFHAFLNILALTPLLERFEAEHGTLTAVALFIGPLSTLPAGIYILIEKFVLH---- 129
Query: 132 RLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGL--FNIPAKWYPLILLVLFQVLM 189
+ +G S +F L+ E ++ +S F L IP PL L +L+
Sbjct: 130 -----RNTAVVGSSIWVFLLLGSE-AIRTFKSNPYFSLGSTKIPTWTSPLFACALVSILV 183
Query: 190 TNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFI 241
N S LGHLC IL G+ G + +P IE L+ R P ++
Sbjct: 184 PNTSFLGHLCAILVGYLLGLGVLKIFVPPEKVLRWIEGK--LNLLGRLPHYV 233
>gi|417359281|ref|YP_002935044.2| peptidase, S54 (rhomboid) family [Edwardsiella ictaluri 93-146]
gi|409033448|gb|ACR70809.2| peptidase, S54 (rhomboid) family [Edwardsiella ictaluri 93-146]
Length = 276
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 50/90 (55%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T V ++C +YL+ L G + P+ +Q++R++T + H S LH++FN++
Sbjct: 98 TIGVTLLCILVYLLQLALGDGAVMAYLAWPADAAQHYQLWRYFTPALLHFSPLHIIFNLM 157
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNA 115
LG ++E+ +G+ ++ I ++ A +A
Sbjct: 158 WWWYLGGQVEKRLGAAKLAQIALVSALMSA 187
>gi|373955987|ref|ZP_09615947.1| Rhomboid family protein [Mucilaginibacter paludis DSM 18603]
gi|373892587|gb|EHQ28484.1| Rhomboid family protein [Mucilaginibacter paludis DSM 18603]
Length = 288
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 29/227 (12%)
Query: 28 AVVIVCGTIYLICLL-----FGYDSFYEICFLPS---AVISRFQVYRFYTSIVFHGSLLH 79
AV ++ G IY+ LL F YD LPS + +RF + +T + HG +LH
Sbjct: 28 AVFLILGLIYVFELLTTKQAFLYDFLSRYLLLPSYLPKLATRF--WTPFTYMFMHGGILH 85
Query: 80 VLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDE 139
+LFNML +G E +G ++ + IL + A+++ +VA+ F V +
Sbjct: 86 LLFNMLWFFWIGQIFEEYLGGKKLITLYILGGLAGALVY-----VVAYNVFPLFTEVKET 140
Query: 140 C-AIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG-- 196
+G + + ++IV +L + S+ + KW I+ +LF +L S++G
Sbjct: 141 ANTVGATASVMAVIVGTATLLPDYTISMMFFGAVKLKWLA-IVYILFDLL----SIVGPN 195
Query: 197 ------HLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQ 237
HL G L GF Y N G S ++ S L ++
Sbjct: 196 AGGEFAHLGGALLGFIYIKQLRNGHDWGGSIEKVLQPKSKLKIAVKN 242
>gi|254429038|ref|ZP_05042745.1| peptidase, S54 (rhomboid) family, putative [Alcanivorax sp. DG881]
gi|196195207|gb|EDX90166.1| peptidase, S54 (rhomboid) family, putative [Alcanivorax sp. DG881]
Length = 273
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 2/104 (1%)
Query: 18 WWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVIS-RFQVYRFYTSIVFHGS 76
W S+ + T +++C I+L LFG D Y P+++ Q +R T ++ H S
Sbjct: 83 WLASMGWVTRIGLVLCVAIFLTPYLFG-DGVYRALLFPASMEGLTSQPWRLITPMLLHFS 141
Query: 77 LLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLL 120
LLH++FN+L LG +ER S ++ +T++ A + + L
Sbjct: 142 LLHIIFNLLWWADLGRLIERHQSSAQLLLVTLVTAAVSNVAQFL 185
>gi|407803472|ref|ZP_11150307.1| hypothetical protein S7S_02543 [Alcanivorax sp. W11-5]
gi|407022564|gb|EKE34316.1| hypothetical protein S7S_02543 [Alcanivorax sp. W11-5]
Length = 285
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 88/190 (46%), Gaps = 15/190 (7%)
Query: 15 ANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFH 74
+ +W + T V+IV +YL +LFG + + F P+ Q +R +T ++ H
Sbjct: 90 SGRWLAGMGPVTKLVLIVTLLVYLSPMLFGSGIYRALMFPPTLEGLLSQPWRLFTPMLLH 149
Query: 75 GSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQ 134
+LH+ FN+L + LG +ER S+++ ++T++ + +++ L A P +
Sbjct: 150 FGVLHIAFNLLWWLDLGRTIERYQSSLQLVWVTLVTSGISSLAQFL-----ASGPAFG-- 202
Query: 135 NVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSL 194
G SGV++ L+ R+ + L + + L++ + L V+
Sbjct: 203 --------GLSGVVYGLLGYLWLYGRVNPRAGYALRREIVIFMLVWLVICYVGLAGIVAN 254
Query: 195 LGHLCGILSG 204
HL G++SG
Sbjct: 255 EAHLAGLISG 264
>gi|323490567|ref|ZP_08095773.1| hypothetical protein GPDM_14436 [Planococcus donghaensis MPA1U2]
gi|323395833|gb|EGA88673.1| hypothetical protein GPDM_14436 [Planococcus donghaensis MPA1U2]
Length = 202
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 73/147 (49%), Gaps = 15/147 (10%)
Query: 59 ISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILH 118
I+ Q +RF+T + H ++H+LFNM +L G ELER+ G VR + TI
Sbjct: 52 IAEGQWWRFFTPMFLHNGVMHLLFNMFSLFLFGPELERLTGKVR--FTTI---------- 99
Query: 119 LLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYP 178
L+A A Y LQ +D +G SG IF + +L R++ L I
Sbjct: 100 YLLAGFFASAATYFLQP-LDYFHVGASGAIFGVFGAFGALVYYGGRALPQLKQIILPIIV 158
Query: 179 LILLVLFQVLMTNVSLLGHLCGILSGF 205
+ +++ F L NV++ H+ G+++GF
Sbjct: 159 ISIVMTF--LTPNVNVTAHIAGMITGF 183
>gi|320102400|ref|YP_004177991.1| rhomboid family protein [Isosphaera pallida ATCC 43644]
gi|319749682|gb|ADV61442.1| Rhomboid family protein [Isosphaera pallida ATCC 43644]
Length = 406
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 101/222 (45%), Gaps = 32/222 (14%)
Query: 12 STRANQWWESIPFFTSAVVIVCGTIYLICLLFGYD-----SFYEICFLPSAVISRFQVYR 66
S+R +++ +P T +++VC ++L+ L + + + AV+++FQV+R
Sbjct: 88 SSRFGAFFQVMPA-TKTLILVCVAVFLLQTLGTEKGQPVIATFGLELDSQAVLNQFQVWR 146
Query: 67 FYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVA 126
TSI H H+LFNML L +G LE +G+ R F + L++ L+ L A
Sbjct: 147 LITSIFLHEGPFHLLFNMLVLFFIGRILEHELGT-REFVMVFLVSG-------LVGSL-A 197
Query: 127 HIPFYRLQNVMDECAIGFSGVI---FSLIVIETSLSGAQSRSVFGLFNIPAKWYP----- 178
FY L +G SG + F L+ + + V F IP
Sbjct: 198 QTAFYALTG--PGLCLGASGAVSGLFGLLALRMP-----NLQVLLFFIIPVTMRNALIAF 250
Query: 179 LILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTS 220
+++ V+F L + L HL G+ G A++Y FNL G S
Sbjct: 251 IVIDVIFTFLPGTTATLAHLGGLSVGMAHSY--FNLNFSGWS 290
>gi|441498231|ref|ZP_20980431.1| Rhomboid family protein [Fulvivirga imtechensis AK7]
gi|441438019|gb|ELR71363.1| Rhomboid family protein [Fulvivirga imtechensis AK7]
Length = 206
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 26/176 (14%)
Query: 46 DSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFY 105
D + F P +V Q YRF TS H +H+LFNML L G ++E +
Sbjct: 23 DILRKWIFNPYSVNKYKQYYRFVTSGFIHNDFIHLLFNMLVLWMFGEQVEYVF------- 75
Query: 106 ITILLATSNAILHL---LIALLVAHIPFY-RLQNVMDECAIGFSG----VIFSLIVIETS 157
T L T+ +L + ++ ++V+ IP Y + ++ A+G SG V+FS I+ +
Sbjct: 76 -TALYGTTGTVLFVALYILGIIVSDIPTYLKHKDHAYYNALGASGGVSSVLFSFILFDP- 133
Query: 158 LSGAQSRSVFGLFNIPAKWYPLILLVLFQVLM-----TNVSLLGHLCGILSGFAYT 208
AQ ++G+ +P + L VL+ M N++ HL G L G A+T
Sbjct: 134 ---AQKLYLYGILGLPGIVWA-ALYVLYSAYMGKREGDNINHDAHLYGGLFGIAFT 185
>gi|419967548|ref|ZP_14483436.1| rhomboid family protein [Rhodococcus opacus M213]
gi|424859689|ref|ZP_18283671.1| rhomboid family protein [Rhodococcus opacus PD630]
gi|356661133|gb|EHI41465.1| rhomboid family protein [Rhodococcus opacus PD630]
gi|414567056|gb|EKT77861.1| rhomboid family protein [Rhodococcus opacus M213]
Length = 305
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 80/188 (42%), Gaps = 30/188 (15%)
Query: 44 GYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVR- 102
G F + P AV+ Q+ R S H ++H+ NM AL +G + E ++G R
Sbjct: 111 GSKLFADWALFPPAVVDG-QIVRVLGSGFLHFGIIHLAVNMFALWVIGRDTELVLGRARY 169
Query: 103 -MFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGA 161
Y LL S A++ + + A G SG +F L+ GA
Sbjct: 170 ACVYFVSLLGGSAAVMLFQLGAVTA----------------GASGAVFGLM-------GA 206
Query: 162 QSRSVFGLFNIPAKWYPLILL-VLFQVLMTNVSLLGHLCGILSGFAYTYGFF---NLLMP 217
Q+ + L PA +I + V+ + + +SL GHL G+++G A T G LL
Sbjct: 207 QAVILLRLRRSPAPVISVIAVNVIISITIPGISLWGHLGGLVAGAAATAGILYGPQLLGA 266
Query: 218 GTSFYSAI 225
G + AI
Sbjct: 267 GNNREKAI 274
>gi|356547255|ref|XP_003542031.1| PREDICTED: inactive rhomboid protein 1-like [Glycine max]
Length = 392
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 82/179 (45%), Gaps = 28/179 (15%)
Query: 57 AVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAI 116
VI QV+R ++ I HG ++HVL NML+LV +G LE+ G VR+ ++ ++ ++
Sbjct: 122 KVIHGHQVWRLFSCIWLHGGVVHVLANMLSLVFIGIRLEQEFGFVRIGFLYVISGFGGSL 181
Query: 117 LHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKW 176
L L + + ++G SG +F L L G S + K+
Sbjct: 182 LSALF--------------IQEGISVGASGALFGL------LGGMLSELLINWTIYANKF 221
Query: 177 YPLILLVLFQVL------MTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSS 229
L+ L++ V+ + +V H+ G +SGF GF L+ P + S+ +S
Sbjct: 222 AALLTLIVIVVINLAIGVLPHVDNFAHIGGFVSGF--FLGFIFLIRPQFKWVSSRHRNS 278
>gi|432891062|ref|XP_004075529.1| PREDICTED: rhomboid-related protein 4-like [Oryzias latipes]
Length = 291
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 76/171 (44%), Gaps = 20/171 (11%)
Query: 20 ESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYT------SIVF 73
+ IP T AV+ + +YL F + C IS Q YR+ S V
Sbjct: 25 DRIPPVTLAVMALNVYLYL----FPAAPLMKTC------ISVHQAYRYKDWRRLLLSPVH 74
Query: 74 HGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRL 133
H LH+ FNM++ + G LER +G Y+ + + ++L++ L+ + +
Sbjct: 75 HADDLHLYFNMVSFLWKGVRLERRLGGAWFLYLLSVFSLLTGCVYLVLEGLLTELT--QD 132
Query: 134 QNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGL--FNIPAKWYPLILL 182
Q+ CA+GFSGV+F+L V+ V G+ N W L+L+
Sbjct: 133 QSYSAACAVGFSGVLFALKVLNNHYHPGGVTYVMGIPVSNRYVSWVELVLI 183
>gi|384107096|ref|ZP_10007998.1| rhomboid family protein [Rhodococcus imtechensis RKJ300]
gi|383833031|gb|EID72500.1| rhomboid family protein [Rhodococcus imtechensis RKJ300]
Length = 305
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 80/188 (42%), Gaps = 30/188 (15%)
Query: 44 GYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVR- 102
G F + P AV+ Q+ R S H ++H+ NM AL +G + E ++G R
Sbjct: 111 GSKLFADWALFPPAVVDG-QIVRVLGSGFLHFGIIHLAVNMFALWVIGRDTELVLGRARY 169
Query: 103 -MFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGA 161
Y LL S A++ + + A G SG +F L+ GA
Sbjct: 170 ACVYFVSLLGGSAAVMLFQLGAVTA----------------GASGAVFGLM-------GA 206
Query: 162 QSRSVFGLFNIPAKWYPLILL-VLFQVLMTNVSLLGHLCGILSGFAYTYGFF---NLLMP 217
Q+ + L PA +I + V+ + + +SL GHL G+++G A T G LL
Sbjct: 207 QAVILLRLRRSPAPVISVIAVNVIISITIPGISLWGHLGGLVAGAAATAGILYGPQLLGA 266
Query: 218 GTSFYSAI 225
G + AI
Sbjct: 267 GNNREKAI 274
>gi|417240695|ref|ZP_12036885.1| rhomboid protease GlpG [Escherichia coli 9.0111]
gi|386212730|gb|EII23174.1| rhomboid protease GlpG [Escherichia coli 9.0111]
Length = 274
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T V+I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 95 TWGVMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLL 154
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ ALL ++ Q G S
Sbjct: 155 WWWYLGGAVEKRLGSGKLIVIT-----------LISALLSGYVQ----QKFSGPWFGGLS 199
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 200 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFD-----LFGMSMANGA--- 251
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 252 HIAGLAVGLAMAF 264
>gi|374600021|ref|ZP_09673023.1| Rhomboid family protein [Myroides odoratus DSM 2801]
gi|423325184|ref|ZP_17303025.1| hypothetical protein HMPREF9716_02382 [Myroides odoratimimus CIP
103059]
gi|373911491|gb|EHQ43340.1| Rhomboid family protein [Myroides odoratus DSM 2801]
gi|404607193|gb|EKB06727.1| hypothetical protein HMPREF9716_02382 [Myroides odoratimimus CIP
103059]
Length = 249
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 60 SRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHL 119
++FQV++ T + HG ++H+ FNM AL GS LE I G+ R++ + ++ A+LH+
Sbjct: 39 AKFQVWQPLTYMFMHGGIMHIFFNMFALFSFGSTLEMIFGTKRLYVLFLISGLGAALLHM 98
>gi|415810590|ref|ZP_11502957.1| rhomboid family protein [Escherichia coli LT-68]
gi|323174058|gb|EFZ59686.1| rhomboid family protein [Escherichia coli LT-68]
Length = 276
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T V+I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 97 TWVVMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLL 156
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ ALL ++ Q G S
Sbjct: 157 WWWYLGGAMEKRLGSGKLIVIT-----------LISALLSGYVQ----QKFSGPWFGGLS 201
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 202 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFD-----LFGMSMANGA--- 253
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 254 HIAGLAVGLAMAF 266
>gi|383810268|ref|ZP_09965764.1| peptidase, S54 family [Prevotella sp. oral taxon 306 str. F0472]
gi|383357013|gb|EID34501.1| peptidase, S54 family [Prevotella sp. oral taxon 306 str. F0472]
Length = 316
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 101/216 (46%), Gaps = 42/216 (19%)
Query: 21 SIPFFTSAVVIVCGTIYLICLLFG-----YDSFYEICFLPSAVISRFQVYRFYTSIVFHG 75
+IP T ++I+ ++ +FG +D+ + + ++ S S F V++F+TS+ HG
Sbjct: 6 NIPIVTRNLLIINVLVFFASYVFGVIGIDFDNLFGLFYIGS---SNFGVWQFFTSMFMHG 62
Query: 76 SLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQN 135
+++H+ NM L GS +E + G + + I+ IL L +Y +
Sbjct: 63 NIMHIATNMFMLWMFGSVIEHVWGPRKFLFYYIICGIGGGILQEL--------AWYCMPF 114
Query: 136 VMDECAIGFSGV---IFSLIVIETSLSGAQSRSVFGL-------------FNIP------ 173
VMD + +GV I S+I I+ +++ S +V GL F IP
Sbjct: 115 VMDTITVTRNGVSIDIPSVIYIQQTMAIGASGAVVGLLLAFGMLFPNERMFIIPIPVPIK 174
Query: 174 AKWY--PLILLVLFQVLM--TNVSLLGHLCGILSGF 205
AKW +I + +F ++++ + H+ G L+GF
Sbjct: 175 AKWLVTGMIAIEIFSSFSPGSDIAHVVHVGGALTGF 210
>gi|256831415|ref|YP_003160142.1| rhomboid family protein [Jonesia denitrificans DSM 20603]
gi|256684946|gb|ACV07839.1| Rhomboid family protein [Jonesia denitrificans DSM 20603]
Length = 292
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 87/190 (45%), Gaps = 23/190 (12%)
Query: 20 ESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSL-- 77
++ P T ++ + +L + G+D F + F+ + + + +RF T+ + H +
Sbjct: 75 DTRPLVTYWIIGLSVATFLAQITLGWDQFTQ-HFVFAPFLGLDEPWRFVTAALLHSTTRY 133
Query: 78 LHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVM 137
H+LFNM AL +GS+LE I+G R + +L A + +L+A V F
Sbjct: 134 FHILFNMWALWVVGSQLELILGRARFITLYVLSAIGGHVAVVLLASPVNESWFIP----- 188
Query: 138 DECAIGFSGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSL 194
+G SG +F L +V GA R + L I V+ ++ N+S
Sbjct: 189 ---TLGASGAVFGLFGALVPVMKRVGADLRGIAVLIGIN---------VVLGFIVPNISW 236
Query: 195 LGHLCGILSG 204
GHL G+L+G
Sbjct: 237 QGHLGGLLTG 246
>gi|423203039|ref|ZP_17189617.1| hypothetical protein HMPREF1167_03200 [Aeromonas veronii AER39]
gi|404613682|gb|EKB10701.1| hypothetical protein HMPREF1167_03200 [Aeromonas veronii AER39]
Length = 277
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 92/185 (49%), Gaps = 22/185 (11%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPS-AVISRFQVYRFYTSIVFHGSLLHVLFN 83
T V+I C IY I + G + E+ F P+ A + +Q +R++T + H S+LH++FN
Sbjct: 99 LTLVVIIACLAIYGIEAI-GLPIYDELAFHPTLAQFTDWQAWRYFTPALIHFSVLHLVFN 157
Query: 84 MLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIG 143
+L LG ++E+ +GS ++ ILL A+ + IA A P + G
Sbjct: 158 LLWWWYLGGQIEQRLGSGKLL---ILLLVGAALPN--IAEFFASGPLFG----------G 202
Query: 144 FSGVIFSLIVIETSLSGAQSRSVFGLFNIPA-KWYPLILLVL--FQVLMTNVSLLGHLCG 200
SGV+++L+ S Q GL PA + L +VL F +L T+ + + HL G
Sbjct: 203 LSGVVYALLGYCWLRSKLQPAC--GLTLPPALMGFMLFWMVLGFFDMLGTSTANIAHLTG 260
Query: 201 ILSGF 205
+L G
Sbjct: 261 LLVGL 265
>gi|330831660|ref|YP_004394612.1| GlpG protein [Aeromonas veronii B565]
gi|423211697|ref|ZP_17198230.1| hypothetical protein HMPREF1169_03748 [Aeromonas veronii AER397]
gi|328806796|gb|AEB51995.1| GlpG protein [Aeromonas veronii B565]
gi|404613196|gb|EKB10231.1| hypothetical protein HMPREF1169_03748 [Aeromonas veronii AER397]
Length = 277
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 92/185 (49%), Gaps = 22/185 (11%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPS-AVISRFQVYRFYTSIVFHGSLLHVLFN 83
T V+I C IY I + G + E+ F P+ A + +Q +R++T + H S+LH++FN
Sbjct: 99 LTLVVIIACLAIYGIETI-GLPIYDELAFHPTLAQFTDWQAWRYFTPALIHFSVLHLVFN 157
Query: 84 MLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIG 143
+L LG ++E+ +GS ++ ILL A+ + IA A P + G
Sbjct: 158 LLWWWYLGGQIEQRLGSGKLL---ILLLVGAALPN--IAEFFASGPLFG----------G 202
Query: 144 FSGVIFSLIVIETSLSGAQSRSVFGLFNIPA-KWYPLILLVL--FQVLMTNVSLLGHLCG 200
SGV+++L+ S Q GL PA + L +VL F +L T+ + + HL G
Sbjct: 203 LSGVVYALLGYCWLRSKLQPAC--GLTLPPALMGFMLFWMVLGFFDMLGTSTANIAHLTG 260
Query: 201 ILSGF 205
+L G
Sbjct: 261 LLVGL 265
>gi|301776194|ref|XP_002923515.1| PREDICTED: LOW QUALITY PROTEIN: rhomboid domain-containing protein
2-like [Ailuropoda melanoleuca]
Length = 364
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 77/158 (48%), Gaps = 9/158 (5%)
Query: 54 LPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATS 113
L S + +QVYR T I + + + +L + + ER +G+VR + T++ A
Sbjct: 50 LRSEALRNWQVYRLVTYIFVYENPVSLLCGAIIIWRFAGNFERTVGTVRHCFFTVIFAIF 109
Query: 114 NAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIP 173
+AI+ L + + +L V D A GF+ V F+++ + + S + VFG+ +P
Sbjct: 110 SAIIFLSFEAVSS---LSKLGEVED--ARGFTPVAFAMLGVNSVRSRMRRALVFGMV-VP 163
Query: 174 AKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGF 211
+ P +LL L+ S L ++CG+ G TYG
Sbjct: 164 SMLVPWLLLCA-SWLIPQTSFLSNVCGL--GIGLTYGL 198
>gi|410984558|ref|XP_003998595.1| PREDICTED: rhomboid domain-containing protein 2 [Felis catus]
Length = 364
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 77/158 (48%), Gaps = 9/158 (5%)
Query: 54 LPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATS 113
L S + +QVYR T I + + + +L + + ER +G+VR + T++ A
Sbjct: 50 LRSEALRNWQVYRLVTYIFVYENPISLLCGAIIIWRFAGNFERTVGTVRHCFFTVIFAIF 109
Query: 114 NAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIP 173
+AI+ L + + +L V D A GF+ V F+++ + + S + VFG+ +P
Sbjct: 110 SAIIFLSFEAVSS---LSKLGEVED--ARGFTPVAFAMLGVNSVRSRMRRALVFGMV-VP 163
Query: 174 AKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGF 211
+ P +LL L+ S L ++CG+ G TYG
Sbjct: 164 SMLVPWLLLCA-SWLIPQTSFLSNVCGL--GIGLTYGL 198
>gi|397733720|ref|ZP_10500434.1| rhomboid family protein [Rhodococcus sp. JVH1]
gi|396930518|gb|EJI97713.1| rhomboid family protein [Rhodococcus sp. JVH1]
Length = 305
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 74/172 (43%), Gaps = 27/172 (15%)
Query: 44 GYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVR- 102
G F + P AV+ Q+ R S H ++H+ NM AL +G + E ++G R
Sbjct: 111 GSKLFADWALFPPAVVD-GQIVRVLGSGFLHFGIIHLAVNMFALWVIGRDTELVLGRARY 169
Query: 103 -MFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGA 161
Y LL S A++ + + A G SG +F L+ GA
Sbjct: 170 ACVYFASLLGGSAAVMLFQLGAVTA----------------GASGAVFGLM-------GA 206
Query: 162 QSRSVFGLFNIPAKWYPLILL-VLFQVLMTNVSLLGHLCGILSGFAYTYGFF 212
Q+ + L PA +I + V+ + + +SL GHL G+++G A T G
Sbjct: 207 QAVILLRLRRSPAPVISVIAINVIISITIPGISLWGHLGGLVAGAAATAGIL 258
>gi|383829530|ref|ZP_09984619.1| putative membrane protein [Saccharomonospora xinjiangensis XJ-54]
gi|383462183|gb|EID54273.1| putative membrane protein [Saccharomonospora xinjiangensis XJ-54]
Length = 317
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 69/157 (43%), Gaps = 25/157 (15%)
Query: 48 FYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMF--Y 105
F E P AV++ + +R TS H LLH+ NMLAL LG +LE ++G VR Y
Sbjct: 125 FAEGVLWPQAVVAFDEWWRLITSGFLHYGLLHLAMNMLALWVLGRDLEMLLGRVRFLAVY 184
Query: 106 ITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRS 165
+L A+ + G SG I+ L+ GA +
Sbjct: 185 FVSMLGGGAAVFAF---------------GAPETSTAGASGAIYGLM-------GAMLVA 222
Query: 166 VFGLFNIPAKWYPLILL-VLFQVLMTNVSLLGHLCGI 201
V L P +I+L ++ V + N+SLLGHL G+
Sbjct: 223 VLRLRLNPTTAIGIIVLNLILTVSIPNISLLGHLGGL 259
>gi|417292295|ref|ZP_12079576.1| rhomboid protease GlpG [Escherichia coli B41]
gi|386254617|gb|EIJ04307.1| rhomboid protease GlpG [Escherichia coli B41]
Length = 274
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 85/193 (44%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T ++IVC +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 95 TWVMMIVCVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLL 154
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ ALL ++ Q G S
Sbjct: 155 WWWYLGGAVEKRLGSGKLIVIT-----------LISALLSGYVQ----QKFSGPWFGGLS 199
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 200 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFD-----LFGMSMANGA--- 251
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 252 HIAGLAVGLAMAF 264
>gi|255577227|ref|XP_002529496.1| Rhomboid protein, putative [Ricinus communis]
gi|223531054|gb|EEF32906.1| Rhomboid protein, putative [Ricinus communis]
Length = 269
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 75/151 (49%), Gaps = 3/151 (1%)
Query: 65 YRFYTSIVFHGSLLHVLFNMLALVPLGSELERI--MGSVRMFYITILLATSNAILHLLIA 122
+R TS H S+LH++FNM AL LG +E++ MG +Y+ L L++
Sbjct: 52 WRIITSAFSHISVLHLVFNMSALWSLGV-VEQLGHMGLGIAYYLHYTLVLVVLSGVLVLG 110
Query: 123 LLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILL 182
+ I +++ A+G+S V+F + I + + +FG ++P + P L
Sbjct: 111 MYRILIQRFKVDYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESL 170
Query: 183 VLFQVLMTNVSLLGHLCGILSGFAYTYGFFN 213
+ +++ S LGHL GI+ G++ +G +
Sbjct: 171 IFTSIIVPQASFLGHLSGIIVGYSIAWGLIH 201
>gi|423204726|ref|ZP_17191282.1| hypothetical protein HMPREF1168_00917 [Aeromonas veronii AMC34]
gi|404625823|gb|EKB22636.1| hypothetical protein HMPREF1168_00917 [Aeromonas veronii AMC34]
Length = 277
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 92/185 (49%), Gaps = 22/185 (11%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPS-AVISRFQVYRFYTSIVFHGSLLHVLFN 83
T V+I C IY I + G + E+ F P+ A + +Q +R++T + H S+LH++FN
Sbjct: 99 LTLVVIIACLAIYGIEAI-GLPIYDELAFHPTLAQFTDWQAWRYFTPALIHFSVLHLVFN 157
Query: 84 MLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIG 143
+L LG ++E+ +GS ++ ILL A+ + IA A P + G
Sbjct: 158 LLWWWYLGGQIEQRLGSGKLL---ILLLVGAALPN--IAEFFASGPLFG----------G 202
Query: 144 FSGVIFSLIVIETSLSGAQSRSVFGLFNIPA-KWYPLILLVL--FQVLMTNVSLLGHLCG 200
SGV+++L+ S Q GL PA + L +VL F +L T+ + + HL G
Sbjct: 203 LSGVVYALLGYCWLRSKLQPAC--GLTLPPALMGFMLFWMVLGFFDMLGTSTANIAHLTG 260
Query: 201 ILSGF 205
+L G
Sbjct: 261 LLVGL 265
>gi|147810722|emb|CAN71797.1| hypothetical protein VITISV_026278 [Vitis vinifera]
Length = 754
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 89/193 (46%), Gaps = 33/193 (17%)
Query: 56 SAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNA 115
S V+ R Q +R T I HG + H+L NML+L+ +G LE+ G V++ + ++ +
Sbjct: 121 SRVVDRHQGWRLITCIWLHGGVFHLLANMLSLLVIGIRLEQEFGFVKVGLLYVISGFGGS 180
Query: 116 ILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSR-----SVFGLF 170
+L L + + ++G SG +F L L G S S++
Sbjct: 181 LLSGLF--------------IQENISVGASGALFGL------LGGMLSELITNWSIYA-- 218
Query: 171 NIPAKWYPLILLVLFQV---LMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIES 227
N A + L++++ + ++ +V H+ G LSGF GF L+ P + S I +
Sbjct: 219 NKLAAFLTLVIIIAINLAVGILPHVDNFAHIGGFLSGF--LLGFVFLIRPQFGWVSQIYA 276
Query: 228 SSLLSTCIRQPKF 240
S ST + PKF
Sbjct: 277 SPEHSTSPK-PKF 288
>gi|380300997|ref|ZP_09850690.1| membrane protein [Brachybacterium squillarum M-6-3]
Length = 310
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 72/155 (46%), Gaps = 24/155 (15%)
Query: 65 YRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVR--MFYITILLATSNAILHLLIA 122
+ F T+ HG ++H+L NM AL +G LE+ +G VR Y+T +LA A++ A
Sbjct: 129 WTFLTAGFLHGGVMHLLLNMYALWIIGQYLEKTLGHVRFAAIYLTSILAGHTAVMLFTDA 188
Query: 123 LLVAHIPFYRLQNVMDECAIGFSGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPL 179
A +Y +G SG IF L + I G Q+ V L L
Sbjct: 189 TSQA---WY-------SGTLGASGGIFGLFAALFIVNRRLGGQTAQVAVLIG-------L 231
Query: 180 ILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNL 214
L++ F L N+S GHL G++ G A T G F L
Sbjct: 232 NLVITF--LFPNISWQGHLGGLVMGAALTAGMFAL 264
>gi|354595840|ref|ZP_09013857.1| Rhomboid protease glpG [Brenneria sp. EniD312]
gi|353673775|gb|EHD19808.1| Rhomboid protease glpG [Brenneria sp. EniD312]
Length = 331
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
T +++I ++L+ + GY+S P A +Q++R+++ + H SLLH+LFN+
Sbjct: 152 LTLSIIIAAIAVFLLMQISGYESVMAWLSYPDAG-QEWQLWRWFSHALLHFSLLHILFNL 210
Query: 85 LALVPLGSELERIMGSVRMFYITIL 109
+ LG +E+++G+ ++ IT++
Sbjct: 211 MWWWYLGGPVEKVLGTGKLLMITLI 235
>gi|298706194|emb|CBJ29235.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 256
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 71/162 (43%), Gaps = 18/162 (11%)
Query: 47 SFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYI 106
SFY++ + A+ + YR T+++ HG H+ N +AL +G E MG+ + +
Sbjct: 103 SFYKLAY---AITDHGEWYRLVTAVMLHGGWGHLAGNSMALFNIGRGTETYMGTEKFVAL 159
Query: 107 TILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSV 166
+ S +L ++ L ++G SG IF L+ E + A ++
Sbjct: 160 YVCSGVSGNVLSCIVDPLTP--------------SLGASGAIFGLLGAEAMIHLAGPKAS 205
Query: 167 FGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYT 208
LF + + VL +L+ N+ GHL G + G A T
Sbjct: 206 MPLF-VSSVGQTAFFAVLVGLLVPNIDHWGHLGGFVGGAALT 246
>gi|425290573|ref|ZP_18681392.1| rhomboid protease glpG [Escherichia coli 3006]
gi|408210107|gb|EKI34680.1| rhomboid protease glpG [Escherichia coli 3006]
Length = 276
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T V+I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 97 TWVVMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLL 156
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ ALL ++ Q G S
Sbjct: 157 WWWYLGGAVEKRLGSGKLIVIT-----------LISALLSGYVQ----QKFSGPWFGGLS 201
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 202 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFD-----LFGMSMANGA--- 253
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 254 HIAGLAVGLAMAF 266
>gi|406576099|ref|ZP_11051770.1| rhomboid family protein [Janibacter hoylei PVAS-1]
gi|404554503|gb|EKA60034.1| rhomboid family protein [Janibacter hoylei PVAS-1]
Length = 297
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 81/186 (43%), Gaps = 23/186 (12%)
Query: 20 ESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFH--GSL 77
+ P T ++ +C ++ + L F E+ F P+ + + +R TS H
Sbjct: 76 DGRPMLTMGIIAICAVVW-VAELLSPRVFQEVAFAPA--LGTAEPWRLITSAFAHSPNQP 132
Query: 78 LHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVM 137
+H+LFNMLAL +G LER++G R + ++ A + ++ LL + + P +
Sbjct: 133 MHILFNMLALWLVGGYLERMLGWARYLAVYLVAALAGSVTWLLFQPVDPYDPGAYVP--- 189
Query: 138 DECAIGFSGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSL 194
+G SG +F L +++ G S S+ I A + ++ NV+
Sbjct: 190 ---VVGASGAVFGLFAAVIVLNRHLGRDSSSMIATIGINA---------VIGFVVPNVAW 237
Query: 195 LGHLCG 200
HL G
Sbjct: 238 EAHLGG 243
>gi|420328315|ref|ZP_14830047.1| rhomboid protease glpG, partial [Shigella flexneri CCH060]
gi|391244593|gb|EIQ03875.1| rhomboid protease glpG, partial [Shigella flexneri CCH060]
Length = 251
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T V+I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 72 TWVVMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLL 131
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ ALL ++ Q G S
Sbjct: 132 WWWYLGGAVEKRLGSGKLIVIT-----------LISALLSGYVQ----QKFSGPWFGGLS 176
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 177 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIIAGWFD-----LFGMSMANGA--- 228
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 229 HIAGLAVGLAMAF 241
>gi|390459001|ref|XP_002743989.2| PREDICTED: rhomboid domain-containing protein 2 [Callithrix
jacchus]
Length = 364
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Query: 54 LPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATS 113
L S + +QVYR T I + + + +L + + ER +G+VR + T++ A
Sbjct: 50 LKSEALRNWQVYRLVTYIFVYENPISLLCGAIIIWRFAGNFERTVGTVRHCFFTVIFAIF 109
Query: 114 NAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIP 173
+AI+ L + + +L V D A GF+ V F+++ + + S + VFG+ +P
Sbjct: 110 SAIIFLSFEAVSS---LSKLGEVED--ARGFTPVAFAMLGVTSVRSRMRRALVFGMV-VP 163
Query: 174 AKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAY 207
+ P +LL L+ S L ++CG+ G +Y
Sbjct: 164 SVLVPWLLLGA-SWLIPQTSFLSNVCGLCIGLSY 196
>gi|300946831|ref|ZP_07161073.1| peptidase, S54 family protein [Escherichia coli MS 116-1]
gi|300956756|ref|ZP_07169024.1| peptidase, S54 family protein [Escherichia coli MS 175-1]
gi|417620037|ref|ZP_12270441.1| rhomboid family protein [Escherichia coli G58-1]
gi|419940289|ref|ZP_14457037.1| intramembrane serine protease GlpG [Escherichia coli 75]
gi|432738919|ref|ZP_19973653.1| rhomboid protease glpG [Escherichia coli KTE42]
gi|300316452|gb|EFJ66236.1| peptidase, S54 family protein [Escherichia coli MS 175-1]
gi|300453511|gb|EFK17131.1| peptidase, S54 family protein [Escherichia coli MS 116-1]
gi|345371125|gb|EGX03098.1| rhomboid family protein [Escherichia coli G58-1]
gi|388403538|gb|EIL64043.1| intramembrane serine protease GlpG [Escherichia coli 75]
gi|431279947|gb|ELF70894.1| rhomboid protease glpG [Escherichia coli KTE42]
Length = 276
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 85/193 (44%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T ++IVC +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 97 TWVMMIVCVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLL 156
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ ALL ++ Q G S
Sbjct: 157 WWWYLGGAVEKRLGSGKLIVIT-----------LISALLSGYVQ----QKFSGPWFGGLS 201
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 202 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFD-----LFGMSMANGA--- 253
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 254 HIAGLAVGLAMAF 266
>gi|429764176|ref|ZP_19296501.1| peptidase, S54 family [Clostridium celatum DSM 1785]
gi|429188574|gb|EKY29452.1| peptidase, S54 family [Clostridium celatum DSM 1785]
Length = 324
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 70/149 (46%), Gaps = 15/149 (10%)
Query: 56 SAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNA 115
+ +I+ QV+R T HG L H+ FNM AL +GSE+E G ++ I + A +
Sbjct: 177 NELINHGQVWRLITCTFLHGGLAHIAFNMYALKIIGSEVEFAYGKIKYILIYLFSALGGS 236
Query: 116 ILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAK 175
I + + P + ++G SG IF L + G ++R G +
Sbjct: 237 IFSYIFS------P--------NSISVGASGAIFGLFG-AMLVFGVKNRHRIGKNYVINL 281
Query: 176 WYPLILLVLFQVLMTNVSLLGHLCGILSG 204
+ +I+ + V ++N+ GH+ G+++G
Sbjct: 282 FKVVIINIFIGVTISNIDNAGHIGGLVAG 310
>gi|403285748|ref|XP_003934173.1| PREDICTED: rhomboid domain-containing protein 2 [Saimiri
boliviensis boliviensis]
Length = 364
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Query: 54 LPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATS 113
L S + +QVYR T I + + + +L + + ER +G+VR + T++ A
Sbjct: 50 LKSEALRNWQVYRLVTYIFVYENPISLLCGAIIIWRFAGNFERTVGTVRHCFFTVIFAIF 109
Query: 114 NAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIP 173
+AI+ L + + +L V D A GF+ V F+++ + + S + VFG+ +P
Sbjct: 110 SAIIFLSFEAVSS---LSKLGEVED--ARGFTPVAFAMLGVTSVRSRMRRALVFGMV-VP 163
Query: 174 AKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAY 207
+ P +LL L+ S L ++CG+ G +Y
Sbjct: 164 SVLVPWLLLGA-SWLIPQTSFLSNVCGLCIGLSY 196
>gi|298713340|emb|CBJ33566.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 677
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 80/165 (48%), Gaps = 15/165 (9%)
Query: 63 QVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIA 122
+ +R +T+ H LH++FN + ELER++G+ R Y+++ L + ++ ++I
Sbjct: 235 EYWRLFTASFSHFEPLHLVFNAMGTWNT-RELERLLGTFRYLYLSLDLVVTTIMVVMVIK 293
Query: 123 LLVAHIPFYRLQNVMDECAIGFSGVIFSLIV-----------IETSLSGAQSRSVF-GLF 170
A + + +++ + A+GFS V+F+ + I T S +F G+
Sbjct: 294 H--ALVKWRGVESQREGKAVGFSCVLFAYMTYLAVAMREFCPIGTLCFSTYSIPMFWGMP 351
Query: 171 NIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLL 215
++P P + QV+M + LGHL GI G+ +GF L
Sbjct: 352 SLPVNLGPFASQAIAQVVMPRAAFLGHLSGIFMGYLMAWGFLGGL 396
>gi|300718791|ref|YP_003743594.1| intramembrane serine protease [Erwinia billingiae Eb661]
gi|299064627|emb|CAX61747.1| intramembrane serine protease [Erwinia billingiae Eb661]
Length = 274
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
T +V+++C ++++ +FG + + P A F+++R++T + H S+LH+ FN+
Sbjct: 96 LTLSVMVMCIVVFVLMQIFGDQTVMSLLAWPDA-DQHFELWRWFTHALLHFSILHITFNL 154
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
+ LG +E+ +GS ++F I ++ A
Sbjct: 155 MWWWYLGGAVEKRLGSGKLFVILLISA 181
>gi|281344807|gb|EFB20391.1| hypothetical protein PANDA_012661 [Ailuropoda melanoleuca]
Length = 323
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 77/158 (48%), Gaps = 9/158 (5%)
Query: 54 LPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATS 113
L S + +QVYR T I + + + +L + + ER +G+VR + T++ A
Sbjct: 9 LRSEALRNWQVYRLVTYIFVYENPVSLLCGAIIIWRFAGNFERTVGTVRHCFFTVIFAIF 68
Query: 114 NAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIP 173
+AI+ L + + +L V D A GF+ V F+++ + + S + VFG+ +P
Sbjct: 69 SAIIFLSFEAVSS---LSKLGEVED--ARGFTPVAFAMLGVNSVRSRMRRALVFGMV-VP 122
Query: 174 AKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGF 211
+ P +LL L+ S L ++CG+ G TYG
Sbjct: 123 SMLVPWLLLCA-SWLIPQTSFLSNVCGL--GIGLTYGL 157
>gi|419393561|ref|ZP_13934362.1| rhomboid family protein [Escherichia coli DEC15A]
gi|419409104|ref|ZP_13949788.1| rhomboid family protein [Escherichia coli DEC15D]
gi|419414656|ref|ZP_13955290.1| rhomboid family protein [Escherichia coli DEC15E]
gi|378235227|gb|EHX95299.1| rhomboid family protein [Escherichia coli DEC15A]
gi|378252556|gb|EHY12445.1| rhomboid family protein [Escherichia coli DEC15D]
gi|378256680|gb|EHY16528.1| rhomboid family protein [Escherichia coli DEC15E]
Length = 274
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T V+I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 95 TWVVMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLL 154
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ ALL ++ Q G S
Sbjct: 155 WWWYLGGAVEKRLGSGKLIVIT-----------LISALLSGYVQ----QKFSGPWFGGLS 199
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 200 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFD-----LFGMSMANGA--- 251
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 252 HIAGLAVGLAMAF 264
>gi|326483086|gb|EGE07096.1| rhomboid protein 2 [Trichophyton equinum CBS 127.97]
Length = 266
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 95/222 (42%), Gaps = 14/222 (6%)
Query: 22 IPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVL 81
+P FT ++ ++I L +D PS + +YR T + H LH
Sbjct: 21 LPLFTRIALLCIVVFWVISLQDVWDVPKWGALYPSKISFAGGMYRINTYPIVHAGFLHAF 80
Query: 82 FNMLALVPLGSELERIMGSVRMFYITI-LLATSNAILHLLIALLVAHIPFYRLQNVMDEC 140
++LA+ PL + E G++ + + L+T A ++++++ R +
Sbjct: 81 LDILAVTPLLEKFEAEHGTLTSLAMFLGPLSTLPAGIYVVLS---------RFIFRSNMP 131
Query: 141 AIGFSGVIFSLIVIETSLSGAQSRSV-FGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLC 199
+G S F L+ E S + +G + IP+ +PLIL +F +L N S +GH C
Sbjct: 132 VLGSSSWFFLLLGSEAIKSFQTHPHISWGKYQIPSWTFPLILNAVFSIL-PNTSFMGHAC 190
Query: 200 GILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFI 241
I G+ G+ L P IE+ L+ R P ++
Sbjct: 191 CIAVGYLLGLGYLKFLFPPEKVLRWIETK--LNLLGRLPHYV 230
>gi|191167321|ref|ZP_03029138.1| peptidase, S54 (rhomboid) family [Escherichia coli B7A]
gi|193061871|ref|ZP_03042968.1| peptidase, S54 (rhomboid) family [Escherichia coli E22]
gi|193068872|ref|ZP_03049832.1| peptidase, S54 (rhomboid) family [Escherichia coli E110019]
gi|194427046|ref|ZP_03059598.1| peptidase, S54 (rhomboid) family [Escherichia coli B171]
gi|331670245|ref|ZP_08371084.1| rhomboid protease GlpG (Intramembrane serineprotease) [Escherichia
coli TA271]
gi|386711303|ref|YP_006175024.1| intramembrane serine protease GlpG [Escherichia coli W]
gi|415787787|ref|ZP_11494334.1| rhomboid family protein [Escherichia coli EPECa14]
gi|417127059|ref|ZP_11974550.1| rhomboid protease GlpG [Escherichia coli 97.0246]
gi|417134512|ref|ZP_11979297.1| rhomboid protease GlpG [Escherichia coli 5.0588]
gi|417146611|ref|ZP_11987458.1| rhomboid protease GlpG [Escherichia coli 1.2264]
gi|417158159|ref|ZP_11995783.1| rhomboid protease GlpG [Escherichia coli 96.0497]
gi|417165425|ref|ZP_11999487.1| rhomboid protease GlpG [Escherichia coli 99.0741]
gi|417176314|ref|ZP_12006110.1| rhomboid protease GlpG [Escherichia coli 3.2608]
gi|417184253|ref|ZP_12009945.1| rhomboid protease GlpG [Escherichia coli 93.0624]
gi|417195659|ref|ZP_12016036.1| rhomboid protease GlpG [Escherichia coli 4.0522]
gi|417210872|ref|ZP_12021289.1| rhomboid protease GlpG [Escherichia coli JB1-95]
gi|417229177|ref|ZP_12030935.1| rhomboid protease GlpG [Escherichia coli 5.0959]
gi|417249844|ref|ZP_12041628.1| rhomboid protease GlpG [Escherichia coli 4.0967]
gi|417295910|ref|ZP_12083157.1| rhomboid protease GlpG [Escherichia coli 900105 (10e)]
gi|417604293|ref|ZP_12254857.1| rhomboid family protein [Escherichia coli STEC_94C]
gi|417641330|ref|ZP_12291460.1| rhomboid family protein [Escherichia coli TX1999]
gi|417668895|ref|ZP_12318434.1| rhomboid family protein [Escherichia coli STEC_O31]
gi|419172261|ref|ZP_13716140.1| rhomboid protease glpG [Escherichia coli DEC7A]
gi|419188444|ref|ZP_13731949.1| rhomboid family protein [Escherichia coli DEC7D]
gi|419193573|ref|ZP_13737018.1| rhomboid protease glpG [Escherichia coli DEC7E]
gi|419205375|ref|ZP_13748538.1| rhomboid family protein [Escherichia coli DEC8B]
gi|419223564|ref|ZP_13766476.1| rhomboid family protein [Escherichia coli DEC8E]
gi|419229041|ref|ZP_13771880.1| rhomboid family protein [Escherichia coli DEC9A]
gi|419234685|ref|ZP_13777452.1| rhomboid family protein [Escherichia coli DEC9B]
gi|419245483|ref|ZP_13788116.1| rhomboid family protein [Escherichia coli DEC9D]
gi|419251344|ref|ZP_13793911.1| rhomboid family protein [Escherichia coli DEC9E]
gi|419263279|ref|ZP_13805686.1| rhomboid family protein [Escherichia coli DEC10B]
gi|419286332|ref|ZP_13828494.1| rhomboid family protein [Escherichia coli DEC10F]
gi|419291606|ref|ZP_13833690.1| rhomboid family protein [Escherichia coli DEC11A]
gi|419296893|ref|ZP_13838929.1| rhomboid family protein [Escherichia coli DEC11B]
gi|419302409|ref|ZP_13844401.1| rhomboid protease glpG [Escherichia coli DEC11C]
gi|419308423|ref|ZP_13850314.1| rhomboid protease glpG [Escherichia coli DEC11D]
gi|419313446|ref|ZP_13855304.1| rhomboid protease glpG [Escherichia coli DEC11E]
gi|419318863|ref|ZP_13860660.1| rhomboid protease glpG [Escherichia coli DEC12A]
gi|419325127|ref|ZP_13866813.1| rhomboid family protein [Escherichia coli DEC12B]
gi|419331071|ref|ZP_13872666.1| rhomboid protease glpG [Escherichia coli DEC12C]
gi|419341968|ref|ZP_13883422.1| rhomboid family protein [Escherichia coli DEC12E]
gi|419347163|ref|ZP_13888533.1| rhomboid family protein [Escherichia coli DEC13A]
gi|419357096|ref|ZP_13898343.1| rhomboid family protein [Escherichia coli DEC13C]
gi|419371996|ref|ZP_13913105.1| rhomboid protease glpG [Escherichia coli DEC14A]
gi|419926802|ref|ZP_14444549.1| intramembrane serine protease GlpG [Escherichia coli 541-1]
gi|421685287|ref|ZP_16125063.1| rhomboid family protein [Shigella flexneri 1485-80]
gi|190902673|gb|EDV62405.1| peptidase, S54 (rhomboid) family [Escherichia coli B7A]
gi|192932661|gb|EDV85258.1| peptidase, S54 (rhomboid) family [Escherichia coli E22]
gi|192957948|gb|EDV88391.1| peptidase, S54 (rhomboid) family [Escherichia coli E110019]
gi|194415007|gb|EDX31277.1| peptidase, S54 (rhomboid) family [Escherichia coli B171]
gi|323154260|gb|EFZ40463.1| rhomboid family protein [Escherichia coli EPECa14]
gi|331062307|gb|EGI34227.1| rhomboid protease GlpG (Intramembrane serineprotease) [Escherichia
coli TA271]
gi|345347661|gb|EGW79965.1| rhomboid family protein [Escherichia coli STEC_94C]
gi|345391354|gb|EGX21147.1| rhomboid family protein [Escherichia coli TX1999]
gi|378012999|gb|EHV75926.1| rhomboid protease glpG [Escherichia coli DEC7A]
gi|378025138|gb|EHV87785.1| rhomboid family protein [Escherichia coli DEC7D]
gi|378035952|gb|EHV98504.1| rhomboid protease glpG [Escherichia coli DEC7E]
gi|378044829|gb|EHW07239.1| rhomboid family protein [Escherichia coli DEC8B]
gi|378062005|gb|EHW24184.1| rhomboid family protein [Escherichia coli DEC8E]
gi|378069512|gb|EHW31602.1| rhomboid family protein [Escherichia coli DEC9A]
gi|378074467|gb|EHW36504.1| rhomboid family protein [Escherichia coli DEC9B]
gi|378087468|gb|EHW49328.1| rhomboid family protein [Escherichia coli DEC9D]
gi|378090725|gb|EHW52561.1| rhomboid family protein [Escherichia coli DEC9E]
gi|378102844|gb|EHW64516.1| rhomboid family protein [Escherichia coli DEC10B]
gi|378125988|gb|EHW87385.1| rhomboid family protein [Escherichia coli DEC11A]
gi|378126297|gb|EHW87692.1| rhomboid family protein [Escherichia coli DEC10F]
gi|378138722|gb|EHW99973.1| rhomboid family protein [Escherichia coli DEC11B]
gi|378144871|gb|EHX06039.1| rhomboid protease glpG [Escherichia coli DEC11D]
gi|378146980|gb|EHX08129.1| rhomboid protease glpG [Escherichia coli DEC11C]
gi|378155365|gb|EHX16424.1| rhomboid protease glpG [Escherichia coli DEC11E]
gi|378161967|gb|EHX22935.1| rhomboid family protein [Escherichia coli DEC12B]
gi|378165760|gb|EHX26690.1| rhomboid protease glpG [Escherichia coli DEC12A]
gi|378166697|gb|EHX27618.1| rhomboid protease glpG [Escherichia coli DEC12C]
gi|378183573|gb|EHX44215.1| rhomboid family protein [Escherichia coli DEC12E]
gi|378183875|gb|EHX44516.1| rhomboid family protein [Escherichia coli DEC13A]
gi|378196584|gb|EHX57070.1| rhomboid family protein [Escherichia coli DEC13C]
gi|378213623|gb|EHX73935.1| rhomboid protease glpG [Escherichia coli DEC14A]
gi|383406995|gb|AFH13238.1| intramembrane serine protease GlpG [Escherichia coli W]
gi|386144362|gb|EIG90828.1| rhomboid protease GlpG [Escherichia coli 97.0246]
gi|386152366|gb|EIH03655.1| rhomboid protease GlpG [Escherichia coli 5.0588]
gi|386162551|gb|EIH24347.1| rhomboid protease GlpG [Escherichia coli 1.2264]
gi|386166909|gb|EIH33429.1| rhomboid protease GlpG [Escherichia coli 96.0497]
gi|386172405|gb|EIH44435.1| rhomboid protease GlpG [Escherichia coli 99.0741]
gi|386179006|gb|EIH56485.1| rhomboid protease GlpG [Escherichia coli 3.2608]
gi|386183815|gb|EIH66562.1| rhomboid protease GlpG [Escherichia coli 93.0624]
gi|386189177|gb|EIH77944.1| rhomboid protease GlpG [Escherichia coli 4.0522]
gi|386195476|gb|EIH89711.1| rhomboid protease GlpG [Escherichia coli JB1-95]
gi|386208512|gb|EII13017.1| rhomboid protease GlpG [Escherichia coli 5.0959]
gi|386220165|gb|EII36629.1| rhomboid protease GlpG [Escherichia coli 4.0967]
gi|386259354|gb|EIJ14828.1| rhomboid protease GlpG [Escherichia coli 900105 (10e)]
gi|388408822|gb|EIL69154.1| intramembrane serine protease GlpG [Escherichia coli 541-1]
gi|397783426|gb|EJK94285.1| rhomboid family protein [Escherichia coli STEC_O31]
gi|404334775|gb|EJZ61251.1| rhomboid family protein [Shigella flexneri 1485-80]
Length = 274
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T V+I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 95 TWVVMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLL 154
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ ALL ++ Q G S
Sbjct: 155 WWWYLGGAVEKRLGSGKLIVIT-----------LISALLSGYVQ----QKFSGPWFGGLS 199
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 200 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFD-----LFGMSMANGA--- 251
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 252 HIAGLAVGLAMAF 264
>gi|419398664|ref|ZP_13939426.1| rhomboid family protein [Escherichia coli DEC15B]
gi|419403945|ref|ZP_13944663.1| rhomboid family protein [Escherichia coli DEC15C]
gi|378240566|gb|EHY00536.1| rhomboid family protein [Escherichia coli DEC15B]
gi|378244248|gb|EHY04192.1| rhomboid family protein [Escherichia coli DEC15C]
Length = 276
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T V+I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 97 TWVVMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLL 156
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ ALL ++ Q G S
Sbjct: 157 WWWYLGGAVEKRLGSGKLIVIT-----------LISALLSGYVQ----QKFSGPWFGGLS 201
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 202 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFD-----LFGMSMANGA--- 253
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 254 HIAGLAVGLAMAF 266
>gi|227494200|ref|ZP_03924516.1| conserved hypothetical protein [Actinomyces coleocanis DSM 15436]
gi|226831934|gb|EEH64317.1| conserved hypothetical protein [Actinomyces coleocanis DSM 15436]
Length = 309
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 78/157 (49%), Gaps = 22/157 (14%)
Query: 65 YRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATS-NAILHLLIAL 123
+RF T ++ HG L+H+ NM +L +G+ LER++G+ R Y+ + +A+ L +L+
Sbjct: 132 WRFLTVMLVHGGLIHLALNMYSLYLVGNSLERVLGTYR--YLALYVASGLGGSLAVLLWA 189
Query: 124 LVAHIPFYRLQNVMDECAIGFSGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLI 180
+V+ FY + +G SG IF L + + SG +R++ L +
Sbjct: 190 MVSLDSFYHVT-------VGASGAIFGLFAAVYVVQRKSGMDARAMGILLAVN------- 235
Query: 181 LLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMP 217
L + F + +NVS GHL G++ G + +P
Sbjct: 236 LALGFTI--SNVSWQGHLGGMIVGALMSLALLRFALP 270
>gi|157156246|ref|YP_001464883.1| intramembrane serine protease GlpG [Escherichia coli E24377A]
gi|209920881|ref|YP_002294965.1| intramembrane serine protease GlpG [Escherichia coli SE11]
gi|218555972|ref|YP_002388885.1| intramembrane serine protease GlpG [Escherichia coli IAI1]
gi|218697106|ref|YP_002404773.1| intramembrane serine protease GlpG [Escherichia coli 55989]
gi|260846206|ref|YP_003223984.1| intramembrane serine protease GlpG [Escherichia coli O103:H2 str.
12009]
gi|260857530|ref|YP_003231421.1| intramembrane serine protease GlpG [Escherichia coli O26:H11 str.
11368]
gi|260870149|ref|YP_003236551.1| putative intramembrane serine protease GlpG [Escherichia coli
O111:H- str. 11128]
gi|293453729|ref|ZP_06664148.1| intramembrane serine protease GlpG [Escherichia coli B088]
gi|300815376|ref|ZP_07095601.1| peptidase, S54 family protein [Escherichia coli MS 107-1]
gi|300822776|ref|ZP_07102913.1| peptidase, S54 family protein [Escherichia coli MS 119-7]
gi|300907431|ref|ZP_07125078.1| peptidase, S54 family protein [Escherichia coli MS 84-1]
gi|300917248|ref|ZP_07133929.1| peptidase, S54 family protein [Escherichia coli MS 115-1]
gi|300926884|ref|ZP_07142651.1| peptidase, S54 family protein [Escherichia coli MS 182-1]
gi|301302304|ref|ZP_07208436.1| peptidase, S54 family protein [Escherichia coli MS 124-1]
gi|301329740|ref|ZP_07222479.1| peptidase, S54 family protein [Escherichia coli MS 78-1]
gi|307311912|ref|ZP_07591550.1| Rhomboid protease [Escherichia coli W]
gi|309794697|ref|ZP_07689119.1| peptidase, S54 family protein [Escherichia coli MS 145-7]
gi|331679487|ref|ZP_08380157.1| rhomboid protease GlpG (Intramembrane serineprotease) [Escherichia
coli H591]
gi|378711151|ref|YP_005276044.1| rhomboid protease [Escherichia coli KO11FL]
gi|386610784|ref|YP_006126270.1| intramembrane serine protease [Escherichia coli W]
gi|386699635|ref|YP_006163472.1| intramembrane serine protease GlpG [Escherichia coli KO11FL]
gi|407471374|ref|YP_006782183.1| intramembrane serine protease GlpG [Escherichia coli O104:H4 str.
2009EL-2071]
gi|407479970|ref|YP_006777119.1| intramembrane serine protease GlpG [Escherichia coli O104:H4 str.
2011C-3493]
gi|410480531|ref|YP_006768077.1| intramembrane serine protease GlpG [Escherichia coli O104:H4 str.
2009EL-2050]
gi|415795957|ref|ZP_11497392.1| rhomboid family protein [Escherichia coli E128010]
gi|415820203|ref|ZP_11509392.1| rhomboid family protein [Escherichia coli OK1180]
gi|415830988|ref|ZP_11516786.1| rhomboid family protein [Escherichia coli OK1357]
gi|415863055|ref|ZP_11536416.1| peptidase, S54 family protein [Escherichia coli MS 85-1]
gi|415874475|ref|ZP_11541473.1| rhomboid protease GlpG [Escherichia coli MS 79-10]
gi|416267040|ref|ZP_11641778.1| intramembrane serine protease GlpG [Shigella dysenteriae CDC
74-1112]
gi|416344310|ref|ZP_11678184.1| intramembrane serine protease GlpG [Escherichia coli EC4100B]
gi|417222604|ref|ZP_12026044.1| rhomboid protease GlpG [Escherichia coli 96.154]
gi|417267307|ref|ZP_12054668.1| rhomboid protease GlpG [Escherichia coli 3.3884]
gi|417583022|ref|ZP_12233822.1| rhomboid family protein [Escherichia coli STEC_B2F1]
gi|417593818|ref|ZP_12244507.1| rhomboid family protein [Escherichia coli 2534-86]
gi|417598810|ref|ZP_12249436.1| rhomboid family protein [Escherichia coli 3030-1]
gi|417610059|ref|ZP_12260556.1| rhomboid family protein [Escherichia coli STEC_DG131-3]
gi|417625494|ref|ZP_12275785.1| rhomboid family protein [Escherichia coli STEC_H.1.8]
gi|417807058|ref|ZP_12453990.1| intramembrane serine protease GlpG [Escherichia coli O104:H4 str.
LB226692]
gi|417834798|ref|ZP_12481240.1| intramembrane serine protease GlpG [Escherichia coli O104:H4 str.
01-09591]
gi|417866525|ref|ZP_12511566.1| hypothetical protein C22711_3454 [Escherichia coli O104:H4 str.
C227-11]
gi|418040700|ref|ZP_12678936.1| Rhomboid protease [Escherichia coli W26]
gi|419182824|ref|ZP_13726433.1| rhomboid family protein [Escherichia coli DEC7C]
gi|419199124|ref|ZP_13742417.1| rhomboid protease glpG [Escherichia coli DEC8A]
gi|419211877|ref|ZP_13754943.1| rhomboid family protein [Escherichia coli DEC8C]
gi|419217813|ref|ZP_13760807.1| rhomboid family protein [Escherichia coli DEC8D]
gi|419239939|ref|ZP_13782645.1| rhomboid family protein [Escherichia coli DEC9C]
gi|419257035|ref|ZP_13799535.1| rhomboid family protein [Escherichia coli DEC10A]
gi|419269263|ref|ZP_13811606.1| rhomboid family protein [Escherichia coli DEC10C]
gi|419275242|ref|ZP_13817525.1| rhomboid family protein [Escherichia coli DEC10D]
gi|419280053|ref|ZP_13822295.1| rhomboid family protein [Escherichia coli DEC10E]
gi|419336553|ref|ZP_13878070.1| rhomboid family protein [Escherichia coli DEC12D]
gi|419351624|ref|ZP_13892954.1| rhomboid family protein [Escherichia coli DEC13B]
gi|419362076|ref|ZP_13903284.1| rhomboid family protein [Escherichia coli DEC13D]
gi|419367246|ref|ZP_13908395.1| rhomboid family protein [Escherichia coli DEC13E]
gi|419377481|ref|ZP_13918500.1| rhomboid family protein [Escherichia coli DEC14B]
gi|419382818|ref|ZP_13923760.1| rhomboid family protein [Escherichia coli DEC14C]
gi|419388118|ref|ZP_13928986.1| rhomboid family protein [Escherichia coli DEC14D]
gi|419806712|ref|ZP_14331808.1| Rhomboid protease [Escherichia coli AI27]
gi|419862190|ref|ZP_14384806.1| intramembrane serine protease GlpG [Escherichia coli O103:H25 str.
CVM9340]
gi|419871298|ref|ZP_14393357.1| intramembrane serine protease GlpG [Escherichia coli O103:H2 str.
CVM9450]
gi|419878568|ref|ZP_14400034.1| intramembrane serine protease GlpG [Escherichia coli O111:H11 str.
CVM9534]
gi|419881459|ref|ZP_14402780.1| intramembrane serine protease GlpG [Escherichia coli O111:H11 str.
CVM9545]
gi|419888108|ref|ZP_14408638.1| intramembrane serine protease GlpG [Escherichia coli O111:H8 str.
CVM9570]
gi|419896599|ref|ZP_14416273.1| intramembrane serine protease GlpG [Escherichia coli O111:H8 str.
CVM9574]
gi|419902546|ref|ZP_14421750.1| intramembrane serine protease GlpG [Escherichia coli O26:H11 str.
CVM9942]
gi|419907054|ref|ZP_14425911.1| rhomboid protease [Escherichia coli O26:H11 str. CVM10026]
gi|419921409|ref|ZP_14439464.1| intramembrane serine protease GlpG [Escherichia coli 541-15]
gi|419949335|ref|ZP_14465580.1| intramembrane serine protease GlpG [Escherichia coli CUMT8]
gi|420090524|ref|ZP_14602293.1| intramembrane serine protease GlpG [Escherichia coli O111:H8 str.
CVM9602]
gi|420096618|ref|ZP_14607987.1| intramembrane serine protease GlpG [Escherichia coli O111:H8 str.
CVM9634]
gi|420100978|ref|ZP_14612114.1| intramembrane serine protease GlpG [Escherichia coli O111:H11 str.
CVM9455]
gi|420108829|ref|ZP_14619040.1| intramembrane serine protease GlpG [Escherichia coli O111:H11 str.
CVM9553]
gi|420116035|ref|ZP_14625501.1| intramembrane serine protease GlpG [Escherichia coli O26:H11 str.
CVM10021]
gi|420121407|ref|ZP_14630506.1| intramembrane serine protease GlpG [Escherichia coli O26:H11 str.
CVM10030]
gi|420125956|ref|ZP_14634725.1| intramembrane serine protease GlpG [Escherichia coli O26:H11 str.
CVM10224]
gi|420132116|ref|ZP_14640497.1| intramembrane serine protease GlpG [Escherichia coli O26:H11 str.
CVM9952]
gi|420382361|ref|ZP_14881796.1| rhomboid protease glpG [Shigella dysenteriae 225-75]
gi|420387675|ref|ZP_14887014.1| rhomboid protease glpG [Escherichia coli EPECa12]
gi|422353325|ref|ZP_16434085.1| peptidase, S54 family protein [Escherichia coli MS 117-3]
gi|422763706|ref|ZP_16817460.1| rhomboid family protein [Escherichia coli E1167]
gi|422778028|ref|ZP_16831679.1| rhomboid family protein [Escherichia coli H120]
gi|422960951|ref|ZP_16972144.1| rhomboid protease glpG [Escherichia coli H494]
gi|422989602|ref|ZP_16980374.1| rhomboid protease glpG [Escherichia coli O104:H4 str. C227-11]
gi|422996497|ref|ZP_16987260.1| rhomboid protease glpG [Escherichia coli O104:H4 str. C236-11]
gi|423001647|ref|ZP_16992400.1| rhomboid protease glpG [Escherichia coli O104:H4 str. 09-7901]
gi|423005306|ref|ZP_16996051.1| rhomboid protease glpG [Escherichia coli O104:H4 str. 04-8351]
gi|423011812|ref|ZP_17002544.1| rhomboid protease glpG [Escherichia coli O104:H4 str. 11-3677]
gi|423021039|ref|ZP_17011746.1| rhomboid protease glpG [Escherichia coli O104:H4 str. 11-4404]
gi|423026204|ref|ZP_17016899.1| rhomboid protease glpG [Escherichia coli O104:H4 str. 11-4522]
gi|423032023|ref|ZP_17022709.1| rhomboid protease glpG [Escherichia coli O104:H4 str. 11-4623]
gi|423034895|ref|ZP_17025573.1| rhomboid protease glpG [Escherichia coli O104:H4 str. 11-4632 C1]
gi|423040023|ref|ZP_17030692.1| rhomboid protease glpG [Escherichia coli O104:H4 str. 11-4632 C2]
gi|423046707|ref|ZP_17037366.1| rhomboid protease glpG [Escherichia coli O104:H4 str. 11-4632 C3]
gi|423055244|ref|ZP_17044050.1| rhomboid protease glpG [Escherichia coli O104:H4 str. 11-4632 C4]
gi|423057236|ref|ZP_17046035.1| rhomboid protease glpG [Escherichia coli O104:H4 str. 11-4632 C5]
gi|423707699|ref|ZP_17682079.1| rhomboid protease glpG [Escherichia coli B799]
gi|424748673|ref|ZP_18176813.1| intramembrane serine protease GlpG [Escherichia coli O26:H11 str.
CFSAN001629]
gi|424767071|ref|ZP_18194408.1| intramembrane serine protease GlpG [Escherichia coli O111:H11 str.
CFSAN001630]
gi|424770075|ref|ZP_18197291.1| intramembrane serine protease GlpG [Escherichia coli O111:H8 str.
CFSAN001632]
gi|425381697|ref|ZP_18765691.1| rhomboid protease glpG [Escherichia coli EC1865]
gi|425424294|ref|ZP_18805448.1| rhomboid protease glpG [Escherichia coli 0.1288]
gi|427806616|ref|ZP_18973683.1| protein of glp regulon [Escherichia coli chi7122]
gi|427811204|ref|ZP_18978269.1| protein of glp regulon [Escherichia coli]
gi|429721068|ref|ZP_19255989.1| rhomboid protease glpG [Escherichia coli O104:H4 str. Ec11-9450]
gi|429772965|ref|ZP_19304983.1| rhomboid protease glpG [Escherichia coli O104:H4 str. 11-02030]
gi|429778331|ref|ZP_19310299.1| rhomboid protease glpG [Escherichia coli O104:H4 str. 11-02033-1]
gi|429786637|ref|ZP_19318530.1| rhomboid protease glpG [Escherichia coli O104:H4 str. 11-02092]
gi|429787581|ref|ZP_19319471.1| rhomboid protease glpG [Escherichia coli O104:H4 str. 11-02093]
gi|429793377|ref|ZP_19325223.1| rhomboid protease glpG [Escherichia coli O104:H4 str. 11-02281]
gi|429799957|ref|ZP_19331750.1| rhomboid protease glpG [Escherichia coli O104:H4 str. 11-02318]
gi|429803572|ref|ZP_19335330.1| rhomboid protease glpG [Escherichia coli O104:H4 str. 11-02913]
gi|429808213|ref|ZP_19339933.1| rhomboid protease glpG [Escherichia coli O104:H4 str. 11-03439]
gi|429813913|ref|ZP_19345589.1| rhomboid protease glpG [Escherichia coli O104:H4 str. 11-04080]
gi|429819123|ref|ZP_19350755.1| rhomboid protease glpG [Escherichia coli O104:H4 str. 11-03943]
gi|429905472|ref|ZP_19371448.1| rhomboid protease glpG [Escherichia coli O104:H4 str. Ec11-9990]
gi|429909609|ref|ZP_19375571.1| rhomboid protease glpG [Escherichia coli O104:H4 str. Ec11-9941]
gi|429915479|ref|ZP_19381425.1| rhomboid protease glpG [Escherichia coli O104:H4 str. Ec11-4984]
gi|429920526|ref|ZP_19386453.1| rhomboid protease glpG [Escherichia coli O104:H4 str. Ec11-5604]
gi|429926330|ref|ZP_19392241.1| rhomboid protease glpG [Escherichia coli O104:H4 str. Ec11-4986]
gi|429930265|ref|ZP_19396165.1| rhomboid protease glpG [Escherichia coli O104:H4 str. Ec11-4987]
gi|429936803|ref|ZP_19402688.1| rhomboid protease glpG [Escherichia coli O104:H4 str. Ec11-4988]
gi|429942485|ref|ZP_19408357.1| rhomboid protease glpG [Escherichia coli O104:H4 str. Ec11-5603]
gi|429945168|ref|ZP_19411028.1| rhomboid protease glpG [Escherichia coli O104:H4 str. Ec11-6006]
gi|429952723|ref|ZP_19418568.1| rhomboid protease glpG [Escherichia coli O104:H4 str. Ec12-0465]
gi|429956078|ref|ZP_19421908.1| rhomboid protease glpG [Escherichia coli O104:H4 str. Ec12-0466]
gi|432378586|ref|ZP_19621569.1| rhomboid protease glpG [Escherichia coli KTE12]
gi|432482728|ref|ZP_19724678.1| rhomboid protease glpG [Escherichia coli KTE210]
gi|432535790|ref|ZP_19772749.1| rhomboid protease glpG [Escherichia coli KTE234]
gi|432676528|ref|ZP_19911975.1| rhomboid protease glpG [Escherichia coli KTE142]
gi|432751870|ref|ZP_19986449.1| rhomboid protease glpG [Escherichia coli KTE29]
gi|432766805|ref|ZP_20001220.1| rhomboid protease glpG [Escherichia coli KTE48]
gi|432807655|ref|ZP_20041569.1| rhomboid protease glpG [Escherichia coli KTE91]
gi|432811133|ref|ZP_20044990.1| rhomboid protease glpG [Escherichia coli KTE101]
gi|432829037|ref|ZP_20062654.1| rhomboid protease glpG [Escherichia coli KTE135]
gi|432836360|ref|ZP_20069892.1| rhomboid protease glpG [Escherichia coli KTE136]
gi|432930777|ref|ZP_20131185.1| rhomboid protease glpG [Escherichia coli KTE184]
gi|432965183|ref|ZP_20154107.1| rhomboid protease glpG [Escherichia coli KTE203]
gi|433093788|ref|ZP_20280043.1| rhomboid protease glpG [Escherichia coli KTE138]
gi|433131973|ref|ZP_20317401.1| rhomboid protease glpG [Escherichia coli KTE163]
gi|433136664|ref|ZP_20321994.1| rhomboid protease glpG [Escherichia coli KTE166]
gi|433195448|ref|ZP_20379423.1| rhomboid protease glpG [Escherichia coli KTE90]
gi|443619486|ref|YP_007383342.1| intramembrane serine protease GlpG [Escherichia coli APEC O78]
gi|450223054|ref|ZP_21897113.1| intramembrane serine protease GlpG [Escherichia coli O08]
gi|171855223|sp|A7ZSV4.1|GLPG_ECO24 RecName: Full=Rhomboid protease GlpG; AltName: Full=Intramembrane
serine protease
gi|226729476|sp|B7M2I4.1|GLPG_ECO8A RecName: Full=Rhomboid protease GlpG; AltName: Full=Intramembrane
serine protease
gi|226729479|sp|B6I2Y7.1|GLPG_ECOSE RecName: Full=Rhomboid protease GlpG; AltName: Full=Intramembrane
serine protease
gi|254798882|sp|B7L4V0.1|GLPG_ECO55 RecName: Full=Rhomboid protease GlpG; AltName: Full=Intramembrane
serine protease
gi|157078276|gb|ABV17984.1| peptidase, S54 (rhomboid) family [Escherichia coli E24377A]
gi|209914140|dbj|BAG79214.1| conserved hypothetical protein [Escherichia coli SE11]
gi|218353838|emb|CAV00201.1| putative intramembrane serine protease [Escherichia coli 55989]
gi|218362740|emb|CAR00366.1| putative intramembrane serine protease [Escherichia coli IAI1]
gi|257756179|dbj|BAI27681.1| predicted intramembrane serine protease GlpG [Escherichia coli
O26:H11 str. 11368]
gi|257761353|dbj|BAI32850.1| predicted intramembrane serine protease GlpG [Escherichia coli
O103:H2 str. 12009]
gi|257766505|dbj|BAI38000.1| predicted intramembrane serine protease GlpG [Escherichia coli
O111:H- str. 11128]
gi|291321855|gb|EFE61286.1| intramembrane serine protease GlpG [Escherichia coli B088]
gi|300400846|gb|EFJ84384.1| peptidase, S54 family protein [Escherichia coli MS 84-1]
gi|300415531|gb|EFJ98841.1| peptidase, S54 family protein [Escherichia coli MS 115-1]
gi|300417143|gb|EFK00454.1| peptidase, S54 family protein [Escherichia coli MS 182-1]
gi|300524776|gb|EFK45845.1| peptidase, S54 family protein [Escherichia coli MS 119-7]
gi|300532268|gb|EFK53330.1| peptidase, S54 family protein [Escherichia coli MS 107-1]
gi|300842467|gb|EFK70227.1| peptidase, S54 family protein [Escherichia coli MS 124-1]
gi|300844155|gb|EFK71915.1| peptidase, S54 family protein [Escherichia coli MS 78-1]
gi|306908056|gb|EFN38556.1| Rhomboid protease [Escherichia coli W]
gi|308121747|gb|EFO59009.1| peptidase, S54 family protein [Escherichia coli MS 145-7]
gi|315062701|gb|ADT77028.1| predicted intramembrane serine protease [Escherichia coli W]
gi|315256016|gb|EFU35984.1| peptidase, S54 family protein [Escherichia coli MS 85-1]
gi|320175486|gb|EFW50584.1| intramembrane serine protease GlpG [Shigella dysenteriae CDC
74-1112]
gi|320199597|gb|EFW74187.1| intramembrane serine protease GlpG [Escherichia coli EC4100B]
gi|323162726|gb|EFZ48564.1| rhomboid family protein [Escherichia coli E128010]
gi|323179051|gb|EFZ64625.1| rhomboid family protein [Escherichia coli OK1180]
gi|323182884|gb|EFZ68285.1| rhomboid family protein [Escherichia coli OK1357]
gi|323376712|gb|ADX48980.1| Rhomboid protease [Escherichia coli KO11FL]
gi|323944354|gb|EGB40429.1| rhomboid family protein [Escherichia coli H120]
gi|324018662|gb|EGB87881.1| peptidase, S54 family protein [Escherichia coli MS 117-3]
gi|324116380|gb|EGC10299.1| rhomboid family protein [Escherichia coli E1167]
gi|331072659|gb|EGI43984.1| rhomboid protease GlpG (Intramembrane serineprotease) [Escherichia
coli H591]
gi|340732942|gb|EGR62078.1| intramembrane serine protease GlpG [Escherichia coli O104:H4 str.
01-09591]
gi|340738515|gb|EGR72764.1| intramembrane serine protease GlpG [Escherichia coli O104:H4 str.
LB226692]
gi|341919814|gb|EGT69424.1| hypothetical protein C22711_3454 [Escherichia coli O104:H4 str.
C227-11]
gi|342930002|gb|EGU98724.1| rhomboid protease GlpG [Escherichia coli MS 79-10]
gi|345333405|gb|EGW65856.1| rhomboid family protein [Escherichia coli 2534-86]
gi|345334802|gb|EGW67243.1| rhomboid family protein [Escherichia coli STEC_B2F1]
gi|345349399|gb|EGW81684.1| rhomboid family protein [Escherichia coli 3030-1]
gi|345355093|gb|EGW87306.1| rhomboid family protein [Escherichia coli STEC_DG131-3]
gi|345373558|gb|EGX05517.1| rhomboid family protein [Escherichia coli STEC_H.1.8]
gi|354858737|gb|EHF19186.1| rhomboid protease glpG [Escherichia coli O104:H4 str. C236-11]
gi|354863191|gb|EHF23625.1| rhomboid protease glpG [Escherichia coli O104:H4 str. C227-11]
gi|354864081|gb|EHF24511.1| rhomboid protease glpG [Escherichia coli O104:H4 str. 04-8351]
gi|354871226|gb|EHF31624.1| rhomboid protease glpG [Escherichia coli O104:H4 str. 09-7901]
gi|354877764|gb|EHF38122.1| rhomboid protease glpG [Escherichia coli O104:H4 str. 11-3677]
gi|354886665|gb|EHF46947.1| rhomboid protease glpG [Escherichia coli O104:H4 str. 11-4404]
gi|354890557|gb|EHF50796.1| rhomboid protease glpG [Escherichia coli O104:H4 str. 11-4522]
gi|354894878|gb|EHF55068.1| rhomboid protease glpG [Escherichia coli O104:H4 str. 11-4623]
gi|354906683|gb|EHF66757.1| rhomboid protease glpG [Escherichia coli O104:H4 str. 11-4632 C1]
gi|354909326|gb|EHF69359.1| rhomboid protease glpG [Escherichia coli O104:H4 str. 11-4632 C2]
gi|354911311|gb|EHF71316.1| rhomboid protease glpG [Escherichia coli O104:H4 str. 11-4632 C3]
gi|354914084|gb|EHF74069.1| rhomboid protease glpG [Escherichia coli O104:H4 str. 11-4632 C4]
gi|354921762|gb|EHF81683.1| rhomboid protease glpG [Escherichia coli O104:H4 str. 11-4632 C5]
gi|371593481|gb|EHN82362.1| rhomboid protease glpG [Escherichia coli H494]
gi|378021596|gb|EHV84298.1| rhomboid family protein [Escherichia coli DEC7C]
gi|378044081|gb|EHW06503.1| rhomboid protease glpG [Escherichia coli DEC8A]
gi|378049665|gb|EHW12003.1| rhomboid family protein [Escherichia coli DEC8C]
gi|378058660|gb|EHW20868.1| rhomboid family protein [Escherichia coli DEC8D]
gi|378080385|gb|EHW42348.1| rhomboid family protein [Escherichia coli DEC9C]
gi|378097593|gb|EHW59345.1| rhomboid family protein [Escherichia coli DEC10A]
gi|378107652|gb|EHW69271.1| rhomboid family protein [Escherichia coli DEC10C]
gi|378112343|gb|EHW73922.1| rhomboid family protein [Escherichia coli DEC10D]
gi|378124966|gb|EHW86369.1| rhomboid family protein [Escherichia coli DEC10E]
gi|378179777|gb|EHX40485.1| rhomboid family protein [Escherichia coli DEC12D]
gi|378197468|gb|EHX57949.1| rhomboid family protein [Escherichia coli DEC13B]
gi|378199609|gb|EHX60070.1| rhomboid family protein [Escherichia coli DEC13D]
gi|378209903|gb|EHX70270.1| rhomboid family protein [Escherichia coli DEC13E]
gi|378216194|gb|EHX76482.1| rhomboid family protein [Escherichia coli DEC14B]
gi|378224759|gb|EHX84960.1| rhomboid family protein [Escherichia coli DEC14C]
gi|378228673|gb|EHX88824.1| rhomboid family protein [Escherichia coli DEC14D]
gi|383391162|gb|AFH16120.1| intramembrane serine protease GlpG [Escherichia coli KO11FL]
gi|383476417|gb|EID68360.1| Rhomboid protease [Escherichia coli W26]
gi|384470303|gb|EIE54418.1| Rhomboid protease [Escherichia coli AI27]
gi|385709331|gb|EIG46329.1| rhomboid protease glpG [Escherichia coli B799]
gi|386202406|gb|EII01397.1| rhomboid protease GlpG [Escherichia coli 96.154]
gi|386229665|gb|EII57020.1| rhomboid protease GlpG [Escherichia coli 3.3884]
gi|388334655|gb|EIL01238.1| intramembrane serine protease GlpG [Escherichia coli O111:H11 str.
CVM9534]
gi|388337477|gb|EIL03978.1| intramembrane serine protease GlpG [Escherichia coli O103:H2 str.
CVM9450]
gi|388345715|gb|EIL11464.1| intramembrane serine protease GlpG [Escherichia coli O103:H25 str.
CVM9340]
gi|388357370|gb|EIL21948.1| intramembrane serine protease GlpG [Escherichia coli O111:H8 str.
CVM9574]
gi|388361045|gb|EIL25188.1| intramembrane serine protease GlpG [Escherichia coli O111:H8 str.
CVM9570]
gi|388365076|gb|EIL28885.1| intramembrane serine protease GlpG [Escherichia coli O111:H11 str.
CVM9545]
gi|388373740|gb|EIL36982.1| intramembrane serine protease GlpG [Escherichia coli O26:H11 str.
CVM9942]
gi|388377974|gb|EIL40754.1| rhomboid protease [Escherichia coli O26:H11 str. CVM10026]
gi|388397799|gb|EIL58761.1| intramembrane serine protease GlpG [Escherichia coli 541-15]
gi|388419300|gb|EIL79047.1| intramembrane serine protease GlpG [Escherichia coli CUMT8]
gi|391298508|gb|EIQ56508.1| rhomboid protease glpG [Shigella dysenteriae 225-75]
gi|391302812|gb|EIQ60662.1| rhomboid protease glpG [Escherichia coli EPECa12]
gi|394385933|gb|EJE63449.1| intramembrane serine protease GlpG [Escherichia coli O111:H8 str.
CVM9602]
gi|394388429|gb|EJE65711.1| intramembrane serine protease GlpG [Escherichia coli O111:H8 str.
CVM9634]
gi|394393729|gb|EJE70382.1| intramembrane serine protease GlpG [Escherichia coli O26:H11 str.
CVM10224]
gi|394404872|gb|EJE80185.1| intramembrane serine protease GlpG [Escherichia coli O26:H11 str.
CVM10021]
gi|394408645|gb|EJE83284.1| intramembrane serine protease GlpG [Escherichia coli O111:H11 str.
CVM9553]
gi|394418500|gb|EJE92174.1| intramembrane serine protease GlpG [Escherichia coli O111:H11 str.
CVM9455]
gi|394425988|gb|EJE98884.1| intramembrane serine protease GlpG [Escherichia coli O26:H11 str.
CVM10030]
gi|394430338|gb|EJF02681.1| intramembrane serine protease GlpG [Escherichia coli O26:H11 str.
CVM9952]
gi|406775693|gb|AFS55117.1| intramembrane serine protease GlpG [Escherichia coli O104:H4 str.
2009EL-2050]
gi|407052267|gb|AFS72318.1| intramembrane serine protease GlpG [Escherichia coli O104:H4 str.
2011C-3493]
gi|407067409|gb|AFS88456.1| intramembrane serine protease GlpG [Escherichia coli O104:H4 str.
2009EL-2071]
gi|408294203|gb|EKJ12614.1| rhomboid protease glpG [Escherichia coli EC1865]
gi|408341432|gb|EKJ55885.1| rhomboid protease glpG [Escherichia coli 0.1288]
gi|412964798|emb|CCK48727.1| protein of glp regulon [Escherichia coli chi7122]
gi|412971383|emb|CCJ46040.1| protein of glp regulon [Escherichia coli]
gi|421933308|gb|EKT91101.1| intramembrane serine protease GlpG [Escherichia coli O111:H11 str.
CFSAN001630]
gi|421943228|gb|EKU00520.1| intramembrane serine protease GlpG [Escherichia coli O111:H8 str.
CFSAN001632]
gi|421944280|gb|EKU01541.1| intramembrane serine protease GlpG [Escherichia coli O26:H11 str.
CFSAN001629]
gi|429346809|gb|EKY83588.1| rhomboid protease glpG [Escherichia coli O104:H4 str. 11-02092]
gi|429356788|gb|EKY93463.1| rhomboid protease glpG [Escherichia coli O104:H4 str. 11-02033-1]
gi|429357663|gb|EKY94336.1| rhomboid protease glpG [Escherichia coli O104:H4 str. 11-02030]
gi|429372955|gb|EKZ09504.1| rhomboid protease glpG [Escherichia coli O104:H4 str. 11-02093]
gi|429374896|gb|EKZ11435.1| rhomboid protease glpG [Escherichia coli O104:H4 str. 11-02281]
gi|429377526|gb|EKZ14047.1| rhomboid protease glpG [Escherichia coli O104:H4 str. 11-02318]
gi|429388758|gb|EKZ25183.1| rhomboid protease glpG [Escherichia coli O104:H4 str. 11-02913]
gi|429391527|gb|EKZ27931.1| rhomboid protease glpG [Escherichia coli O104:H4 str. 11-03439]
gi|429392536|gb|EKZ28937.1| rhomboid protease glpG [Escherichia coli O104:H4 str. 11-03943]
gi|429402057|gb|EKZ38350.1| rhomboid protease glpG [Escherichia coli O104:H4 str. 11-04080]
gi|429403110|gb|EKZ39395.1| rhomboid protease glpG [Escherichia coli O104:H4 str. Ec11-9990]
gi|429406737|gb|EKZ42992.1| rhomboid protease glpG [Escherichia coli O104:H4 str. Ec11-9450]
gi|429414778|gb|EKZ50952.1| rhomboid protease glpG [Escherichia coli O104:H4 str. Ec11-4984]
gi|429418248|gb|EKZ54394.1| rhomboid protease glpG [Escherichia coli O104:H4 str. Ec11-4986]
gi|429424540|gb|EKZ60641.1| rhomboid protease glpG [Escherichia coli O104:H4 str. Ec11-4987]
gi|429428343|gb|EKZ64419.1| rhomboid protease glpG [Escherichia coli O104:H4 str. Ec11-4988]
gi|429433400|gb|EKZ69433.1| rhomboid protease glpG [Escherichia coli O104:H4 str. Ec11-5603]
gi|429440360|gb|EKZ76338.1| rhomboid protease glpG [Escherichia coli O104:H4 str. Ec11-5604]
gi|429445258|gb|EKZ81200.1| rhomboid protease glpG [Escherichia coli O104:H4 str. Ec12-0465]
gi|429449199|gb|EKZ85101.1| rhomboid protease glpG [Escherichia coli O104:H4 str. Ec11-6006]
gi|429454850|gb|EKZ90708.1| rhomboid protease glpG [Escherichia coli O104:H4 str. Ec12-0466]
gi|429458957|gb|EKZ94777.1| rhomboid protease glpG [Escherichia coli O104:H4 str. Ec11-9941]
gi|430896220|gb|ELC18464.1| rhomboid protease glpG [Escherichia coli KTE12]
gi|431004344|gb|ELD19570.1| rhomboid protease glpG [Escherichia coli KTE210]
gi|431058031|gb|ELD67441.1| rhomboid protease glpG [Escherichia coli KTE234]
gi|431211512|gb|ELF09478.1| rhomboid protease glpG [Escherichia coli KTE142]
gi|431293810|gb|ELF84093.1| rhomboid protease glpG [Escherichia coli KTE29]
gi|431307402|gb|ELF95694.1| rhomboid protease glpG [Escherichia coli KTE48]
gi|431353096|gb|ELG39854.1| rhomboid protease glpG [Escherichia coli KTE91]
gi|431360295|gb|ELG46906.1| rhomboid protease glpG [Escherichia coli KTE101]
gi|431382461|gb|ELG66799.1| rhomboid protease glpG [Escherichia coli KTE136]
gi|431383109|gb|ELG67250.1| rhomboid protease glpG [Escherichia coli KTE135]
gi|431460828|gb|ELH41113.1| rhomboid protease glpG [Escherichia coli KTE184]
gi|431477298|gb|ELH57068.1| rhomboid protease glpG [Escherichia coli KTE203]
gi|431607725|gb|ELI77080.1| rhomboid protease glpG [Escherichia coli KTE138]
gi|431643748|gb|ELJ11438.1| rhomboid protease glpG [Escherichia coli KTE163]
gi|431653805|gb|ELJ20882.1| rhomboid protease glpG [Escherichia coli KTE166]
gi|431713520|gb|ELJ77754.1| rhomboid protease glpG [Escherichia coli KTE90]
gi|443423994|gb|AGC88898.1| intramembrane serine protease GlpG [Escherichia coli APEC O78]
gi|449314547|gb|EMD04713.1| intramembrane serine protease GlpG [Escherichia coli O08]
Length = 276
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T V+I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 97 TWVVMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLL 156
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ ALL ++ Q G S
Sbjct: 157 WWWYLGGAVEKRLGSGKLIVIT-----------LISALLSGYVQ----QKFSGPWFGGLS 201
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 202 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFD-----LFGMSMANGA--- 253
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 254 HIAGLAVGLAMAF 266
>gi|187733536|ref|YP_001882101.1| intramembrane serine protease GlpG [Shigella boydii CDC 3083-94]
gi|226729490|sp|B2U3N2.1|GLPG_SHIB3 RecName: Full=Rhomboid protease GlpG; AltName: Full=Intramembrane
serine protease
gi|187430528|gb|ACD09802.1| peptidase, S54 (rhomboid) family [Shigella boydii CDC 3083-94]
Length = 276
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T V+I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 97 TWVVMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLL 156
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ ALL ++ Q G S
Sbjct: 157 WWWYLGGAVEKRLGSGKLIVIT-----------LISALLSGYVQ----QKFSGPWFGGLS 201
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 202 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFD-----LFGMSMANGA--- 253
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 254 HIAGLAVGLAMAF 266
>gi|424791297|ref|ZP_18217756.1| Rhomboid family membrane protein [Xanthomonas translucens pv.
graminis ART-Xtg29]
gi|422797604|gb|EKU25836.1| Rhomboid family membrane protein [Xanthomonas translucens pv.
graminis ART-Xtg29]
Length = 219
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 63/139 (45%), Gaps = 14/139 (10%)
Query: 22 IPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVIS------RFQVYRFYTSIVFHG 75
+P T A++I ++L+ LL G DSF P + FQ+++ T HG
Sbjct: 5 LPPVTQALLIGNVAVFLLQLLLGDDSFAPFMLWPISNFDAFSPGQNFQIWQLLTYGFLHG 64
Query: 76 SLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQN 135
H+LFNMLAL G LE+ G+ R ++ + +L+ ++ + N
Sbjct: 65 GFSHLLFNMLALYMFGGPLEQTWGNKRFLTYYLVCVAGAGLCQVLVG-------WWTVSN 117
Query: 136 VMDEC-AIGFSGVIFSLIV 153
D +G SG +F L++
Sbjct: 118 GGDPYPTLGASGGVFGLLL 136
>gi|406675119|ref|ZP_11082309.1| hypothetical protein HMPREF1170_00517 [Aeromonas veronii AMC35]
gi|404627889|gb|EKB24678.1| hypothetical protein HMPREF1170_00517 [Aeromonas veronii AMC35]
Length = 277
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 92/185 (49%), Gaps = 22/185 (11%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPS-AVISRFQVYRFYTSIVFHGSLLHVLFN 83
T V+I C IY I + G F ++ F P+ A + +Q +R++T + H S+LH++FN
Sbjct: 99 LTLVVIIACLAIYGIEAI-GLPIFDQLAFHPTLAQFTDWQAWRYFTPALIHFSVLHLVFN 157
Query: 84 MLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIG 143
+L LG ++E+ +GS ++ ILL A+ + IA A P + G
Sbjct: 158 LLWWWYLGGQIEQRLGSGKLL---ILLLVGAALPN--IAEFFASGPLFG----------G 202
Query: 144 FSGVIFSLIVIETSLSGAQSRSVFGLFNIPA-KWYPLILLVL--FQVLMTNVSLLGHLCG 200
SGV+++L+ S Q GL PA + L +VL F +L T+ + + HL G
Sbjct: 203 LSGVVYALLGYCWLRSKLQPAC--GLTLPPALMGFMLFWMVLGFFDMLGTSTANIAHLTG 260
Query: 201 ILSGF 205
+L G
Sbjct: 261 LLVGL 265
>gi|315053819|ref|XP_003176284.1| rhomboid protein 2 [Arthroderma gypseum CBS 118893]
gi|311338130|gb|EFQ97332.1| rhomboid protein 2 [Arthroderma gypseum CBS 118893]
Length = 266
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 105/238 (44%), Gaps = 28/238 (11%)
Query: 13 TRANQWWESIPFFTSAVVIVCGTIYLICLLF------GYDSFYEICFLPSAVISRFQVYR 66
+R + +P FT ++++C ++ + L G+ S + PS + +YR
Sbjct: 12 SRLRSYLLRLPLFTR-LILLCIVVFWVASLQHVWNVPGWGSLH-----PSKISFAGGMYR 65
Query: 67 FYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITI-LLATSNAILHLLIALLV 125
T + H LH NMLA+ PL + E G++ + + L+T A +++L++ +
Sbjct: 66 INTYPIVHSGFLHAFLNMLAVTPLLEKFEAEHGTLTSLAMFLGPLSTLPAGIYVLLSRFI 125
Query: 126 AHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRS--VFGLFNIPAKWYPLILLV 183
H + +G S F L+ E ++ Q+ +G + IP+ +PLIL
Sbjct: 126 FH---------TNSPVLGSSSWFFLLLGSE-AIKRFQTHPHISWGKYQIPSWTFPLILNA 175
Query: 184 LFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFI 241
+ +L N S +GH C I G+ G+ L P IE+ L+ R P ++
Sbjct: 176 VLSIL-PNTSFVGHTCCIGVGYLLGLGYLKFLFPPEKVLRWIETK--LNLLGRLPHYV 230
>gi|443626016|ref|ZP_21110448.1| putative membrane protein [Streptomyces viridochromogenes Tue57]
gi|443340440|gb|ELS54650.1| putative membrane protein [Streptomyces viridochromogenes Tue57]
Length = 313
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 71/159 (44%), Gaps = 27/159 (16%)
Query: 59 ISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILH 118
++ Q YR TS+ HGS +H+LFNML+L +G LE +G VR + ++ + + L
Sbjct: 145 VAEGQWYRLLTSMFLHGSYIHILFNMLSLWWIGGPLEAALGRVRYIALYLVSGLAGSALT 204
Query: 119 LLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYP 178
LIA ++ ++G SG IF L L + + P
Sbjct: 205 YLIA-------------AANQPSLGASGAIFGLFGATAVL----------MRRLQYDMRP 241
Query: 179 LILLVLFQVLMT----NVSLLGHLCGILSGFAYTYGFFN 213
+I L++ ++ T ++ H+ G+++G Y +
Sbjct: 242 VIALLVINLIFTFGLAQIAWQAHIGGLVAGLLVGYAMVH 280
>gi|258443587|ref|ZP_05691926.1| rhomboid family protein [Staphylococcus aureus A8115]
gi|282893050|ref|ZP_06301284.1| peptidase [Staphylococcus aureus A8117]
gi|443635576|ref|ZP_21119704.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21236]
gi|257850993|gb|EEV74936.1| rhomboid family protein [Staphylococcus aureus A8115]
gi|282764368|gb|EFC04494.1| peptidase [Staphylococcus aureus A8117]
gi|443409217|gb|ELS67715.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21236]
Length = 487
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 27/187 (14%)
Query: 30 VIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSLLHVLFNM 84
+I + +C++ ++F ++ L + F V YR TS+ H S H+L NM
Sbjct: 163 IIFVNVLIWLCMILYLNNFSDVKLLDVGGLVHFNVVHGEWYRIVTSMFLHFSFEHILMNM 222
Query: 85 LALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGF 144
L+L G +E I+GS RM + IA L + F L ++G
Sbjct: 223 LSLFIFGKIVEAIIGSWRMLTV------------YFIAGLFGN--FVSLSFNTTTISVGA 268
Query: 145 SGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGI 201
SG IF L I +S ++ + G I L++LV + M+N++++ H+ G
Sbjct: 269 SGAIFGLIGSIFAMMYVSKTFNKKMLGQLLI-----ALVILVGVSLFMSNINIVAHIGGF 323
Query: 202 LSGFAYT 208
+ G T
Sbjct: 324 IGGLLIT 330
>gi|82545780|ref|YP_409727.1| intramembrane serine protease GlpG [Shigella boydii Sb227]
gi|416296529|ref|ZP_11651454.1| intramembrane serine protease GlpG [Shigella flexneri CDC 796-83]
gi|417684065|ref|ZP_12333406.1| rhomboid family protein [Shigella boydii 3594-74]
gi|123558456|sp|Q31VK9.1|GLPG_SHIBS RecName: Full=Rhomboid protease GlpG; AltName: Full=Intramembrane
serine protease
gi|81247191|gb|ABB67899.1| protein of glp regulon [Shigella boydii Sb227]
gi|320185934|gb|EFW60683.1| intramembrane serine protease GlpG [Shigella flexneri CDC 796-83]
gi|332090323|gb|EGI95421.1| rhomboid family protein [Shigella boydii 3594-74]
Length = 276
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T V+I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 97 TWVVMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLL 156
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ ALL ++ Q G S
Sbjct: 157 WWWYLGGAVEKRLGSGKLIVIT-----------LISALLSGYVQ----QKFSGPWFGGLS 201
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 202 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIIAGWFD-----LFGMSMANGA--- 253
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 254 HIAGLAVGLAMAF 266
>gi|432528279|ref|ZP_19765355.1| rhomboid protease glpG [Escherichia coli KTE233]
gi|431060902|gb|ELD70224.1| rhomboid protease glpG [Escherichia coli KTE233]
Length = 276
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T V+I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 97 TWVVMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLL 156
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ ALL ++ Q G S
Sbjct: 157 WWWYLGGAVEKRLGSGKLIVIT-----------LISALLSGYVQ----QKFSGPWFGGLS 201
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 202 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFD-----LFGMSMANGA--- 253
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 254 HIAGLAVGLAMAF 266
>gi|420338855|ref|ZP_14840408.1| rhomboid protease glpG [Shigella flexneri K-315]
gi|391257577|gb|EIQ16689.1| rhomboid protease glpG [Shigella flexneri K-315]
Length = 276
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T V+I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 97 TWVVMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLL 156
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ ALL ++ Q G S
Sbjct: 157 WWWYLGGAVEKRLGSGKLIVIT-----------LISALLSGYVQ----QKFSGPWFGGLS 201
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 202 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFD-----LFGMSMANGA--- 253
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 254 HIAGLAVGLAMAF 266
>gi|296275094|ref|ZP_06857601.1| rhomboid family protein [Staphylococcus aureus subsp. aureus MR1]
Length = 487
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 27/187 (14%)
Query: 30 VIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSLLHVLFNM 84
+I + +C++ ++F ++ L + F V YR TS+ H S H+L NM
Sbjct: 163 IIFVNVLIWLCMILYLNNFSDVKLLDVGGLVHFNVVHGEWYRIVTSMFLHFSFEHILMNM 222
Query: 85 LALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGF 144
L+L G +E I+GS RM + IA L + F L ++G
Sbjct: 223 LSLFIFGKIVEAIIGSWRMLTV------------YFIAGLFGN--FVSLSFNTTTISVGA 268
Query: 145 SGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGI 201
SG IF L I +S ++ + G I L++LV + M+N++++ H+ G
Sbjct: 269 SGAIFGLIGSIFAMMYVSKTFNKKMLGQLLI-----ALVILVGVSLFMSNINIVAHIGGF 323
Query: 202 LSGFAYT 208
+ G T
Sbjct: 324 IGGLLIT 330
>gi|82751152|ref|YP_416893.1| hypothetical protein SAB1421c [Staphylococcus aureus RF122]
gi|82656683|emb|CAI81110.1| probable membrane protein [Staphylococcus aureus RF122]
Length = 487
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 27/187 (14%)
Query: 30 VIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSLLHVLFNM 84
+I + +C++ ++F ++ L + F V YR TS+ H S H+L NM
Sbjct: 163 IIFVNVLIWLCMILYLNNFSDVKLLDVGGLVHFNVVHGEWYRIVTSMFLHFSFEHILMNM 222
Query: 85 LALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGF 144
L+L G +E I+GS RM + IA L + F L ++G
Sbjct: 223 LSLFIFGKIVEAIIGSWRMLTV------------YFIAGLFGN--FVSLSFNTTTISVGA 268
Query: 145 SGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGI 201
SG IF L I +S ++ + G I L++LV + M+N++++ H+ G
Sbjct: 269 SGAIFGLIGSIFAMMYVSKTFNKKMLGQLLI-----ALVILVGVSLFMSNINIVAHIGGF 323
Query: 202 LSGFAYT 208
+ G T
Sbjct: 324 IGGLLIT 330
>gi|417649370|ref|ZP_12299174.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21189]
gi|440735000|ref|ZP_20914611.1| rhomboid family peptidase [Staphylococcus aureus subsp. aureus DSM
20231]
gi|329728476|gb|EGG64913.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21189]
gi|436431095|gb|ELP28449.1| rhomboid family peptidase [Staphylococcus aureus subsp. aureus DSM
20231]
Length = 487
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 27/187 (14%)
Query: 30 VIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSLLHVLFNM 84
+I + +C++ ++F ++ L + F V YR TS+ H S H+L NM
Sbjct: 163 IIFVNVLIWLCMILYLNNFSDVKLLDVGGLVHFNVVHGEWYRIVTSMFLHFSFEHILMNM 222
Query: 85 LALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGF 144
L+L G +E I+GS RM + IA L + F L ++G
Sbjct: 223 LSLFIFGKIVEAIIGSWRMLTV------------YFIAGLFGN--FVSLSFNTTTISVGA 268
Query: 145 SGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGI 201
SG IF L I +S ++ + G I L++LV + M+N++++ H+ G
Sbjct: 269 SGAIFGLIGSIFAMMYVSKTFNKKMLGQLLI-----ALVILVGVSLFMSNINIVAHIGGF 323
Query: 202 LSGFAYT 208
+ G T
Sbjct: 324 IGGLLIT 330
>gi|46255831|gb|AAH69017.1| Rhomboid domain containing 2 [Homo sapiens]
Length = 364
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 75/154 (48%), Gaps = 7/154 (4%)
Query: 54 LPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATS 113
L S + +QVYR T I + + + + + + ER +G+VR + T++ A
Sbjct: 50 LKSEALRNWQVYRLVTYIFVYENPISLPCGAIIIWRFAGNFERTVGTVRHCFFTVIFAIF 109
Query: 114 NAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIP 173
+AI+ L + + +L V D A GF+ V F+++ + T S + VFG+ +P
Sbjct: 110 SAIIFLSFEAVSS---LSKLGEVED--ARGFTPVAFAMLGVTTVRSRMRRALVFGMV-VP 163
Query: 174 AKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAY 207
+ P +LL L+ S L ++CG+ G AY
Sbjct: 164 SVLVPWLLLGA-SWLIPQTSFLSNVCGLSIGLAY 196
>gi|326469416|gb|EGD93425.1| rhomboid family protein [Trichophyton tonsurans CBS 112818]
Length = 266
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 95/222 (42%), Gaps = 14/222 (6%)
Query: 22 IPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVL 81
+P FT ++ ++I L +D PS + +YR T + H LH
Sbjct: 21 LPLFTRLALLCIVVFWVISLQDVWDVPKWGALYPSKISFAGGMYRINTYPIVHAGFLHAF 80
Query: 82 FNMLALVPLGSELERIMGSVRMFYITI-LLATSNAILHLLIALLVAHIPFYRLQNVMDEC 140
++LA+ PL + E G++ + + L+T A ++++++ R +
Sbjct: 81 LDILAVTPLLEKFEAEHGTLTSLAMFLGPLSTLPAGIYVVLS---------RFIFRSNMP 131
Query: 141 AIGFSGVIFSLIVIETSLSGAQSRSV-FGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLC 199
+G S F L+ E S + +G + IP+ +PLIL +F +L N S +GH C
Sbjct: 132 VLGSSSWFFLLLGSEAIKSFQTHPHISWGKYQIPSWTFPLILNAVFSIL-PNTSFMGHAC 190
Query: 200 GILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFI 241
I G+ G+ L P IE+ L+ R P ++
Sbjct: 191 CIAVGYLLGLGYLKFLFPPEKVLRWIETK--LNLLGRLPHYV 230
>gi|327308968|ref|XP_003239175.1| rhomboid family protein [Trichophyton rubrum CBS 118892]
gi|326459431|gb|EGD84884.1| rhomboid family protein [Trichophyton rubrum CBS 118892]
Length = 266
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 103/234 (44%), Gaps = 20/234 (8%)
Query: 13 TRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIV 72
+R + +P FT ++ ++I L +D PS + +YR T +
Sbjct: 12 SRLRSYLLRLPLFTRLALLCIVVFWVIGLQNVWDVPKWGALYPSKISFAGGMYRINTYPI 71
Query: 73 FHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITI-LLATSNAILHLLIALLV--AHIP 129
H LH N++A+ PL + E G++ + + L+T A ++++++ V +++P
Sbjct: 72 VHAGFLHAFLNIIAVTPLLEKFEAEHGTLTSLAMFLGPLSTLPAGIYVVLSRFVFRSNMP 131
Query: 130 FYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRS--VFGLFNIPAKWYPLILLVLFQV 187
+G S F L+ E ++ Q+ +G + IP+ +PLIL +F V
Sbjct: 132 -----------VLGSSSWFFLLLGSE-AIKRFQTHPHISWGKYQIPSWTFPLILNAVFSV 179
Query: 188 LMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFI 241
L N S +GH C I G+ G+ L P IE+ L+ R P ++
Sbjct: 180 L-PNTSFMGHTCCIAVGYLLGLGYLKFLFPPEKVLRWIETK--LNLLGRLPHYV 230
>gi|119592181|gb|EAW71775.1| rhomboid domain containing 2, isoform CRA_c [Homo sapiens]
Length = 254
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 7/153 (4%)
Query: 54 LPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATS 113
L S + +QVYR T I + + + +L + + ER +G+VR + T++ A
Sbjct: 95 LKSEALRNWQVYRLVTYIFVYENPISLLCGAIIIWRFAGNFERTVGTVRHCFFTVIFAIF 154
Query: 114 NAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIP 173
+AI+ L + + +L V D A GF+ V F+++ + T S + VFG+ +P
Sbjct: 155 SAIIFLSFEAVSS---LSKLGEVED--ARGFTPVAFAMLGVTTVRSRMRRALVFGMV-VP 208
Query: 174 AKWYPLILLVLFQVLMTNVSLLGHLCGILSGFA 206
+ P +LL L+ S L ++CG+ G A
Sbjct: 209 SVLVPWLLLGA-SWLIPQTSFLSNVCGLSIGLA 240
>gi|253733201|ref|ZP_04867366.1| S54 family peptidase [Staphylococcus aureus subsp. aureus TCH130]
gi|417897863|ref|ZP_12541789.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21259]
gi|253728741|gb|EES97470.1| S54 family peptidase [Staphylococcus aureus subsp. aureus TCH130]
gi|341849365|gb|EGS90508.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21259]
Length = 487
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 27/187 (14%)
Query: 30 VIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSLLHVLFNM 84
+I + +C++ ++F ++ L + F V YR TS+ H S H+L NM
Sbjct: 163 IIFVNVLIWLCMILYLNNFSDVKLLDVGGLVHFNVVHGEWYRIVTSMFLHFSFEHILMNM 222
Query: 85 LALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGF 144
L+L G +E I+GS RM + IA L + F L ++G
Sbjct: 223 LSLFIFGKIVEAIIGSWRMLTV------------YFIAGLFGN--FVSLSFNTTTISVGA 268
Query: 145 SGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGI 201
SG IF L I +S ++ + G I L++LV + M+N++++ H+ G
Sbjct: 269 SGAIFGLIGSIFAMMYVSKTFNKKMLGQLLI-----ALVILVGVSLFMSNINIVAHIGGF 323
Query: 202 LSGFAYT 208
+ G T
Sbjct: 324 IGGLLIT 330
>gi|386831159|ref|YP_006237813.1| hypothetical protein SAEMRSA15_14690 [Staphylococcus aureus subsp.
aureus HO 5096 0412]
gi|417798923|ref|ZP_12446077.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21310]
gi|418654972|ref|ZP_13216857.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-105]
gi|334275085|gb|EGL93386.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21310]
gi|375038535|gb|EHS31510.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-105]
gi|385196551|emb|CCG16180.1| putative membrane protein [Staphylococcus aureus subsp. aureus HO
5096 0412]
Length = 487
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 27/187 (14%)
Query: 30 VIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSLLHVLFNM 84
+I + +C++ ++F ++ L + F V YR TS+ H S H+L NM
Sbjct: 163 IIFVNVLIWLCMILYLNNFSDVKLLDVGGLVHFNVVHGEWYRIVTSMFLHFSFEHILMNM 222
Query: 85 LALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGF 144
L+L G +E I+GS RM + IA L + F L ++G
Sbjct: 223 LSLFIFGKIVEAIIGSWRMLTV------------YFIAGLFGN--FVSLSFNTTTISVGA 268
Query: 145 SGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGI 201
SG IF L I +S ++ + G I L++LV + M+N++++ H+ G
Sbjct: 269 SGAIFGLIGSIFAMMYVSKTFNKKMLGQLLI-----ALVILVGVSLFMSNINIVAHIGGF 323
Query: 202 LSGFAYT 208
+ G T
Sbjct: 324 IGGLLIT 330
>gi|332281970|ref|ZP_08394383.1| rhomboid protease glpG [Shigella sp. D9]
gi|332104322|gb|EGJ07668.1| rhomboid protease glpG [Shigella sp. D9]
Length = 276
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T V+I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 97 TWVVMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLL 156
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ ALL ++ Q G S
Sbjct: 157 WWWYLGGAVEKRLGSGKLIVIT-----------LISALLSGYVQ----QKFSGPWFGGLS 201
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 202 GVVYALMGYVWLRGERDPQSGIYLQRGIIIFALIWIVAGWFD-----LFGMSMANGA--- 253
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 254 HIAGLAVGLAMAF 266
>gi|212715177|ref|ZP_03323305.1| hypothetical protein BIFCAT_00066 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
gi|212661858|gb|EEB22433.1| hypothetical protein BIFCAT_00066 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
Length = 264
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 31/205 (15%)
Query: 17 QWWESIPFFTSAVVIVCGTIYLICLLF------GYDSFYEI-CFLPSAVISRFQVYRFYT 69
+W P T A++++C ++++ L GY+SF F+P+ R + F T
Sbjct: 27 RWRNGDPVITVAIMVICVAVWIVETLLKIAWPAGYNSFVGTGVFMPALATHR--PWTFIT 84
Query: 70 SIVFH--GSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAH 127
S+ H SL H+LFNML L +G LER+MG + + +L + ++ ALL
Sbjct: 85 SMFLHQPASLWHILFNMLTLWCVGPVLERMMGHLPYLALYVLSGLGGSAGMMVWALLS-- 142
Query: 128 IPFYRLQNVMDECAIGFSGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVL 184
Q+ A G SG +F L I++ G RS+ W +++ L
Sbjct: 143 ------QDGWLTSAYGASGALFGLFASILVVYQRIGIDIRSML-------IW--MLINFL 187
Query: 185 FQVLMTNVSLLGHLCGILSGFAYTY 209
++ N++ H+ G + G + +
Sbjct: 188 MPIITPNIAWQAHIGGFIVGGVFAW 212
>gi|441142545|ref|ZP_20962413.1| hypothetical protein SRIM_00110 [Streptomyces rimosus subsp.
rimosus ATCC 10970]
gi|440622490|gb|ELQ85269.1| hypothetical protein SRIM_00110 [Streptomyces rimosus subsp.
rimosus ATCC 10970]
Length = 303
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 73/159 (45%), Gaps = 27/159 (16%)
Query: 59 ISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILH 118
++ + YR T++ H + +H++FNML+L LG LE G VR + +L + L
Sbjct: 134 VAEGEWYRLLTAVFLHQAPMHIIFNMLSLWWLGPPLEAAFGRVRFLALYLLSGLGGSALS 193
Query: 119 LLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYP 178
L+A ++ ++G SG IF L+ +V + + P
Sbjct: 194 YLLA-------------AQNQPSLGASGAIFGLL----------GATVILMRRLNYDMRP 230
Query: 179 LILLVLFQVLMT----NVSLLGHLCGILSGFAYTYGFFN 213
+++L+ ++ T +++ H+ G++ G A TYG +
Sbjct: 231 VLILLALNLVFTFAWPDIAWQAHVGGLVMGAAVTYGMVH 269
>gi|21283230|ref|NP_646318.1| hypothetical protein MW1501 [Staphylococcus aureus subsp. aureus
MW2]
gi|49486385|ref|YP_043606.1| hypothetical protein SAS1487 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|253732202|ref|ZP_04866367.1| S54 family peptidase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|297207732|ref|ZP_06924167.1| rhomboid family protein [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|300911813|ref|ZP_07129256.1| rhomboid family protein [Staphylococcus aureus subsp. aureus TCH70]
gi|418934519|ref|ZP_13488341.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIGC128]
gi|418988616|ref|ZP_13536288.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1835]
gi|448740624|ref|ZP_21722600.1| Integral membrane protein (Rhomboid family) [Staphylococcus aureus
KT/314250]
gi|21204670|dbj|BAB95366.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MW2]
gi|49244828|emb|CAG43288.1| putative membrane protein [Staphylococcus aureus subsp. aureus
MSSA476]
gi|253723991|gb|EES92720.1| S54 family peptidase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|296887749|gb|EFH26647.1| rhomboid family protein [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|300886059|gb|EFK81261.1| rhomboid family protein [Staphylococcus aureus subsp. aureus TCH70]
gi|377717709|gb|EHT41884.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1835]
gi|377770613|gb|EHT94374.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIGC128]
gi|445548591|gb|ELY16841.1| Integral membrane protein (Rhomboid family) [Staphylococcus aureus
KT/314250]
Length = 487
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 27/187 (14%)
Query: 30 VIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSLLHVLFNM 84
+I + +C++ ++F ++ L + F V YR TS+ H S H+L NM
Sbjct: 163 IIFVNVLIWLCMILYLNNFSDVKLLDVGGLVHFNVVHGEWYRIVTSMFLHFSFEHILMNM 222
Query: 85 LALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGF 144
L+L G +E I+GS RM + IA L + F L ++G
Sbjct: 223 LSLFIFGKIVEAIIGSWRMLTV------------YFIAGLFGN--FVSLSFNTTTISVGA 268
Query: 145 SGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGI 201
SG IF L I +S ++ + G I L++LV + M+N++++ H+ G
Sbjct: 269 SGAIFGLIGSIFAMMYVSKTFNKKMLGQLLI-----ALVILVGVSLFMSNINIVAHIGGF 323
Query: 202 LSGFAYT 208
+ G T
Sbjct: 324 IGGLLIT 330
>gi|225440378|ref|XP_002270642.1| PREDICTED: inactive rhomboid protein 1 [Vitis vinifera]
Length = 388
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 89/193 (46%), Gaps = 33/193 (17%)
Query: 56 SAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNA 115
S V+ R Q +R T I HG + H+L NML+L+ +G LE+ G V++ + ++ +
Sbjct: 121 SRVVDRHQGWRLITCIWLHGGVFHLLANMLSLLVIGIRLEQEFGFVKVGLLYVISGFGGS 180
Query: 116 ILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSR-----SVFGLF 170
+L L + + ++G SG +F L L G S S++
Sbjct: 181 LLSGLF--------------IQENISVGASGALFGL------LGGMLSELITNWSIYA-- 218
Query: 171 NIPAKWYPLILLVLFQV---LMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIES 227
N A + L++++ + ++ +V H+ G LSGF GF L+ P + S I +
Sbjct: 219 NKLAAFLTLVIIIAINLAVGILPHVDNFAHIGGFLSGF--LLGFVFLIRPQFGWVSQIYA 276
Query: 228 SSLLSTCIRQPKF 240
S ST +PKF
Sbjct: 277 SPEHSTS-PKPKF 288
>gi|432373978|ref|ZP_19617009.1| rhomboid protease glpG [Escherichia coli KTE11]
gi|430893400|gb|ELC15724.1| rhomboid protease glpG [Escherichia coli KTE11]
Length = 276
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T V+I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 97 TWVVMIACVLVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLL 156
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ ALL ++ Q G S
Sbjct: 157 WWWYLGGAVEKRLGSGKLIVIT-----------LISALLSGYVQ----QKFSGPWFGGLS 201
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 202 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFD-----LFGMSMANGA--- 253
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 254 HIAGLAVGLAMAF 266
>gi|418313141|ref|ZP_12924635.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21334]
gi|365236412|gb|EHM77301.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21334]
Length = 487
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 27/187 (14%)
Query: 30 VIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSLLHVLFNM 84
+I + +C++ ++F ++ L + F V YR TS+ H S H+L NM
Sbjct: 163 IIFVNVLIWLCMILYLNNFSDVKLLDVGGLVHFNVVHGEWYRIVTSMFLHFSFEHILMNM 222
Query: 85 LALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGF 144
L+L G +E I+GS RM + IA L + F L ++G
Sbjct: 223 LSLFIFGKIVEAIIGSWRMLTV------------YFIAGLFGN--FVSLSFNTTTISVGA 268
Query: 145 SGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGI 201
SG IF L I +S ++ + G I L++LV + M+N++++ H+ G
Sbjct: 269 SGAIFGLIGSIFAMMYVSKTFNKKMLGQLLI-----ALVILVGVSLFMSNINIVAHIGGF 323
Query: 202 LSGFAYT 208
+ G T
Sbjct: 324 IGGLLIT 330
>gi|297564157|ref|YP_003683130.1| rhomboid family protein [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296848606|gb|ADH70624.1| Rhomboid family protein [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 306
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 14/87 (16%)
Query: 65 YRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALL 124
YR T+ HGS+ H+LFN A+ LG++LER +G VR + +L A + ++L LL
Sbjct: 139 YRLLTAAFLHGSIFHLLFNGYAMYLLGTQLERWLGHVRFLTLWVLGAFAGSVLSLLAE-- 196
Query: 125 VAHIPFYRLQNVMDECAIGFSGVIFSL 151
++ ++G SG IF+L
Sbjct: 197 ------------PNQFSVGASGAIFAL 211
>gi|15924539|ref|NP_372073.1| hypothetical protein SAV1549 [Staphylococcus aureus subsp. aureus
Mu50]
gi|15927129|ref|NP_374662.1| hypothetical protein SA1379 [Staphylococcus aureus subsp. aureus
N315]
gi|57651942|ref|YP_186446.1| rhomboid family protein [Staphylococcus aureus subsp. aureus COL]
gi|87160848|ref|YP_494204.1| rhomboid family peptidase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|151221664|ref|YP_001332486.1| peptidase, rhomboid family protein [Staphylococcus aureus subsp.
aureus str. Newman]
gi|156979867|ref|YP_001442126.1| hypothetical protein SAHV_1536 [Staphylococcus aureus subsp. aureus
Mu3]
gi|161509778|ref|YP_001575437.1| peptidase [Staphylococcus aureus subsp. aureus USA300_TCH1516]
gi|253314920|ref|ZP_04838133.1| rhomboid family peptidase [Staphylococcus aureus subsp. aureus str.
CF-Marseille]
gi|255006335|ref|ZP_05144936.2| rhomboid family peptidase [Staphylococcus aureus subsp. aureus
Mu50-omega]
gi|257425674|ref|ZP_05602098.1| rhomboid family peptidase [Staphylococcus aureus subsp. aureus
55/2053]
gi|257428335|ref|ZP_05604733.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
65-1322]
gi|257430972|ref|ZP_05607352.1| peptidase [Staphylococcus aureus subsp. aureus 68-397]
gi|257433660|ref|ZP_05610018.1| rhomboid family peptidase [Staphylococcus aureus subsp. aureus
E1410]
gi|257436574|ref|ZP_05612618.1| peptidase [Staphylococcus aureus subsp. aureus M876]
gi|258437381|ref|ZP_05689365.1| peptidase [Staphylococcus aureus A9299]
gi|258450622|ref|ZP_05698684.1| peptidase [Staphylococcus aureus A5948]
gi|262049127|ref|ZP_06022004.1| hypothetical protein SAD30_0284 [Staphylococcus aureus D30]
gi|262051211|ref|ZP_06023435.1| hypothetical protein SA930_1642 [Staphylococcus aureus 930918-3]
gi|269203177|ref|YP_003282446.1| rhomboid family protein [Staphylococcus aureus subsp. aureus ED98]
gi|282911187|ref|ZP_06318989.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282914356|ref|ZP_06322142.1| rhomboid family protein [Staphylococcus aureus subsp. aureus M899]
gi|282916819|ref|ZP_06324577.1| peptidase [Staphylococcus aureus subsp. aureus D139]
gi|282919325|ref|ZP_06327060.1| peptidase [Staphylococcus aureus subsp. aureus C427]
gi|282920098|ref|ZP_06327823.1| peptidase [Staphylococcus aureus A9765]
gi|282924650|ref|ZP_06332318.1| peptidase [Staphylococcus aureus subsp. aureus C101]
gi|283770625|ref|ZP_06343517.1| peptidase [Staphylococcus aureus subsp. aureus H19]
gi|284024608|ref|ZP_06379006.1| rhomboid family protein [Staphylococcus aureus subsp. aureus 132]
gi|293503430|ref|ZP_06667277.1| peptidase [Staphylococcus aureus subsp. aureus 58-424]
gi|293510447|ref|ZP_06669153.1| rhomboid family protein [Staphylococcus aureus subsp. aureus M809]
gi|293530987|ref|ZP_06671669.1| rhomboid family protein [Staphylococcus aureus subsp. aureus M1015]
gi|294848580|ref|ZP_06789326.1| peptidase [Staphylococcus aureus A9754]
gi|304380862|ref|ZP_07363522.1| rhomboid family protein [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|384547782|ref|YP_005737035.1| membrane protein [Staphylococcus aureus subsp. aureus ED133]
gi|384870090|ref|YP_005752804.1| Peptidase, rhomboid family protein [Staphylococcus aureus subsp.
aureus T0131]
gi|385781834|ref|YP_005758005.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
11819-97]
gi|387143156|ref|YP_005731549.1| hypothetical protein SATW20_15450 [Staphylococcus aureus subsp.
aureus TW20]
gi|415686263|ref|ZP_11450400.1| S54 family peptidase [Staphylococcus aureus subsp. aureus CGS01]
gi|416840018|ref|ZP_11903337.1| rhomboid family peptidase [Staphylococcus aureus O11]
gi|416845827|ref|ZP_11906228.1| rhomboid family peptidase [Staphylococcus aureus O46]
gi|417654442|ref|ZP_12304161.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21193]
gi|417797331|ref|ZP_12444527.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21305]
gi|417892437|ref|ZP_12536486.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21201]
gi|417905331|ref|ZP_12549142.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21269]
gi|418277349|ref|ZP_12891936.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21178]
gi|418285050|ref|ZP_12897750.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21209]
gi|418316423|ref|ZP_12927861.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21340]
gi|418319401|ref|ZP_12930781.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21232]
gi|418321319|ref|ZP_12932665.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus VCU006]
gi|418569512|ref|ZP_13133838.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21283]
gi|418574454|ref|ZP_13138623.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21333]
gi|418579474|ref|ZP_13143569.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1114]
gi|418599967|ref|ZP_13163441.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21343]
gi|418641900|ref|ZP_13204105.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-24]
gi|418645086|ref|ZP_13207214.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-55]
gi|418646803|ref|ZP_13208896.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-88]
gi|418650585|ref|ZP_13212603.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-91]
gi|418658392|ref|ZP_13220120.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-111]
gi|418875489|ref|ZP_13429745.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIGC93]
gi|418903856|ref|ZP_13457897.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1770]
gi|418912160|ref|ZP_13466141.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG547]
gi|418914647|ref|ZP_13468619.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIGC340D]
gi|418925809|ref|ZP_13479711.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG2018]
gi|418948536|ref|ZP_13500834.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-157]
gi|419773145|ref|ZP_14299156.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus CO-23]
gi|421148571|ref|ZP_15608231.1| peptidase, rhomboid family protein [Staphylococcus aureus subsp.
aureus str. Newbould 305]
gi|422742667|ref|ZP_16796670.1| peptidase, S54 family protein [Staphylococcus aureus subsp. aureus
MRSA177]
gi|424768990|ref|ZP_18196227.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus CM05]
gi|424785384|ref|ZP_18212187.1| rhomboid family serine protease [Staphylococcus aureus CN79]
gi|440707269|ref|ZP_20887968.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21282]
gi|443640018|ref|ZP_21124018.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21196]
gi|448743065|ref|ZP_21724979.1| Integral membrane protein (Rhomboid family) [Staphylococcus aureus
KT/Y21]
gi|13701347|dbj|BAB42641.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
N315]
gi|14247320|dbj|BAB57711.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
Mu50]
gi|57286128|gb|AAW38222.1| rhomboid family protein [Staphylococcus aureus subsp. aureus COL]
gi|87126822|gb|ABD21336.1| peptidase, rhomboid family [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|150374464|dbj|BAF67724.1| peptidase, rhomboid family protein [Staphylococcus aureus subsp.
aureus str. Newman]
gi|156722002|dbj|BAF78419.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
Mu3]
gi|160368587|gb|ABX29558.1| S54 family peptidase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|257271368|gb|EEV03514.1| rhomboid family peptidase [Staphylococcus aureus subsp. aureus
55/2053]
gi|257275176|gb|EEV06663.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
65-1322]
gi|257278402|gb|EEV09038.1| peptidase [Staphylococcus aureus subsp. aureus 68-397]
gi|257281753|gb|EEV11890.1| rhomboid family peptidase [Staphylococcus aureus subsp. aureus
E1410]
gi|257283925|gb|EEV14048.1| peptidase [Staphylococcus aureus subsp. aureus M876]
gi|257848586|gb|EEV72574.1| peptidase [Staphylococcus aureus A9299]
gi|257861780|gb|EEV84579.1| peptidase [Staphylococcus aureus A5948]
gi|259160848|gb|EEW45868.1| hypothetical protein SA930_1642 [Staphylococcus aureus 930918-3]
gi|259162796|gb|EEW47361.1| hypothetical protein SAD30_0284 [Staphylococcus aureus D30]
gi|262075467|gb|ACY11440.1| rhomboid family protein [Staphylococcus aureus subsp. aureus ED98]
gi|269941039|emb|CBI49423.1| putative membrane protein [Staphylococcus aureus subsp. aureus
TW20]
gi|282313485|gb|EFB43880.1| peptidase [Staphylococcus aureus subsp. aureus C101]
gi|282317135|gb|EFB47509.1| peptidase [Staphylococcus aureus subsp. aureus C427]
gi|282319306|gb|EFB49658.1| peptidase [Staphylococcus aureus subsp. aureus D139]
gi|282321537|gb|EFB51862.1| rhomboid family protein [Staphylococcus aureus subsp. aureus M899]
gi|282324882|gb|EFB55192.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282594446|gb|EFB99431.1| peptidase [Staphylococcus aureus A9765]
gi|283460772|gb|EFC07862.1| peptidase [Staphylococcus aureus subsp. aureus H19]
gi|290920255|gb|EFD97321.1| rhomboid family protein [Staphylococcus aureus subsp. aureus M1015]
gi|291095096|gb|EFE25361.1| peptidase [Staphylococcus aureus subsp. aureus 58-424]
gi|291466811|gb|EFF09331.1| rhomboid family protein [Staphylococcus aureus subsp. aureus M809]
gi|294824606|gb|EFG41029.1| peptidase [Staphylococcus aureus A9754]
gi|298694831|gb|ADI98053.1| probable membrane protein [Staphylococcus aureus subsp. aureus
ED133]
gi|304340589|gb|EFM06523.1| rhomboid family protein [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|315198756|gb|EFU29084.1| S54 family peptidase [Staphylococcus aureus subsp. aureus CGS01]
gi|320144103|gb|EFW35872.1| peptidase, S54 family protein [Staphylococcus aureus subsp. aureus
MRSA177]
gi|323440447|gb|EGA98159.1| rhomboid family peptidase [Staphylococcus aureus O11]
gi|323443221|gb|EGB00839.1| rhomboid family peptidase [Staphylococcus aureus O46]
gi|329314225|gb|AEB88638.1| Peptidase, rhomboid family protein [Staphylococcus aureus subsp.
aureus T0131]
gi|329730828|gb|EGG67206.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21193]
gi|334266823|gb|EGL85293.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21305]
gi|341843607|gb|EGS84829.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21269]
gi|341857602|gb|EGS98414.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21201]
gi|364522823|gb|AEW65573.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
11819-97]
gi|365172061|gb|EHM62806.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21209]
gi|365173639|gb|EHM64128.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21178]
gi|365225551|gb|EHM66794.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus VCU006]
gi|365240520|gb|EHM81292.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21232]
gi|365241107|gb|EHM81862.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21340]
gi|371979181|gb|EHO96416.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21333]
gi|371985641|gb|EHP02702.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21283]
gi|374395556|gb|EHQ66819.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21343]
gi|375018355|gb|EHS11935.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-24]
gi|375023919|gb|EHS17364.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-55]
gi|375027871|gb|EHS21229.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-91]
gi|375032097|gb|EHS25352.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-88]
gi|375038662|gb|EHS31625.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-111]
gi|375371869|gb|EHS75629.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-157]
gi|377697501|gb|EHT21856.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1114]
gi|377722417|gb|EHT46543.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG547]
gi|377742871|gb|EHT66856.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1770]
gi|377744878|gb|EHT68855.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG2018]
gi|377758149|gb|EHT82037.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIGC340D]
gi|377769561|gb|EHT93329.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIGC93]
gi|383972969|gb|EID88990.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus CO-23]
gi|394331714|gb|EJE57797.1| peptidase, rhomboid family protein [Staphylococcus aureus subsp.
aureus str. Newbould 305]
gi|402348381|gb|EJU83373.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus CM05]
gi|408423672|emb|CCJ11083.1| Putative uncharacterized protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408425662|emb|CCJ13049.1| Putative uncharacterized protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408427649|emb|CCJ15012.1| Putative uncharacterized protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408429638|emb|CCJ26803.1| Putative uncharacterized protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408431625|emb|CCJ18940.1| Putative uncharacterized protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408433619|emb|CCJ20904.1| Putative uncharacterized protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408435611|emb|CCJ22871.1| Putative uncharacterized protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408437595|emb|CCJ24838.1| Putative uncharacterized protein [Staphylococcus aureus subsp.
aureus ST228]
gi|421956794|gb|EKU09123.1| rhomboid family serine protease [Staphylococcus aureus CN79]
gi|436506025|gb|ELP41864.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21282]
gi|443406293|gb|ELS64877.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21196]
gi|445563752|gb|ELY19909.1| Integral membrane protein (Rhomboid family) [Staphylococcus aureus
KT/Y21]
Length = 487
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 27/187 (14%)
Query: 30 VIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSLLHVLFNM 84
+I + +C++ ++F ++ L + F V YR TS+ H S H+L NM
Sbjct: 163 IIFVNVLIWLCMILYLNNFSDVKLLDVGGLVHFNVVHGEWYRIVTSMFLHFSFEHILMNM 222
Query: 85 LALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGF 144
L+L G +E I+GS RM + IA L + F L ++G
Sbjct: 223 LSLFIFGKIVEAIIGSWRMLTV------------YFIAGLFGN--FVSLSFNTTTISVGA 268
Query: 145 SGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGI 201
SG IF L I +S ++ + G I L++LV + M+N++++ H+ G
Sbjct: 269 SGAIFGLIGSIFAMMYVSKTFNKKMLGQLLI-----ALVILVGVSLFMSNINIVAHIGGF 323
Query: 202 LSGFAYT 208
+ G T
Sbjct: 324 IGGLLIT 330
>gi|27364577|ref|NP_760105.1| GlpG protein [Vibrio vulnificus CMCP6]
gi|37678302|ref|NP_932911.1| hypothetical protein VV0118 [Vibrio vulnificus YJ016]
gi|320154980|ref|YP_004187359.1| GlpG protein (membrane protein of glp regulon) [Vibrio vulnificus
MO6-24/O]
gi|27360696|gb|AAO09632.1| GlpG protein (membrane protein of glp regulon) [Vibrio vulnificus
CMCP6]
gi|37197041|dbj|BAC92882.1| uncharacterized membrane protein [Vibrio vulnificus YJ016]
gi|319930292|gb|ADV85156.1| GlpG protein (membrane protein of glp regulon) [Vibrio vulnificus
MO6-24/O]
Length = 280
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
Query: 26 TSAVVIVCGTIYLICLLFGYDS-FYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
T AV++ C +Y + ++FG++S P+ ++Q++R+ + + H S+ H++FN+
Sbjct: 100 TMAVMVACVAVY-VLMMFGWESALLSAMHFPAEAAQQWQLWRWVSHALLHFSVTHIVFNL 158
Query: 85 LALVPLGSELERIMGSVRMFYITILLAT 112
L G ++E+ +GS ++ I ++ A
Sbjct: 159 LWWWQFGGDIEQRLGSGKLLQIFVISAA 186
>gi|418430534|ref|ZP_13003445.1| hypothetical protein MQE_01426 [Staphylococcus aureus subsp. aureus
VRS3a]
gi|387718274|gb|EIK06258.1| hypothetical protein MQE_01426 [Staphylococcus aureus subsp. aureus
VRS3a]
Length = 487
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 27/187 (14%)
Query: 30 VIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSLLHVLFNM 84
+I + +C++ ++F ++ L + F V YR TS+ H S H+L NM
Sbjct: 163 IIFVNVLIWLCMILYLNNFSDVKLLDVGGLVHFNVVHGEWYRIVTSMFLHFSFEHILMNM 222
Query: 85 LALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGF 144
L+L G +E I+GS RM + IA L + F L ++G
Sbjct: 223 LSLFIFGKIVEAIIGSWRMLTV------------YFIAGLFGN--FVSLSFNTTTISVGA 268
Query: 145 SGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGI 201
SG IF L I +S ++ + G I L++LV + M+N++++ H+ G
Sbjct: 269 SGAIFGLIGSIFAMMYVSKTFNKKMLGQLLI-----ALVILVGVSLFMSNINIVAHIGGF 323
Query: 202 LSGFAYT 208
+ G T
Sbjct: 324 IGGLLIT 330
>gi|418892279|ref|ZP_13446392.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1176]
gi|377730573|gb|EHT54640.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1176]
Length = 487
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 27/187 (14%)
Query: 30 VIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSLLHVLFNM 84
+I + +C++ ++F ++ L + F V YR TS+ H S H+L NM
Sbjct: 163 IIFVNVLIWLCMILYLNNFSDVKLLDVGGLVHFNVVHGEWYRIVTSMFLHFSFEHILMNM 222
Query: 85 LALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGF 144
L+L G +E I+GS RM + IA L + F L ++G
Sbjct: 223 LSLFIFGKIVEAIIGSWRMLTV------------YFIAGLFGN--FVSLSFNTTTISVGA 268
Query: 145 SGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGI 201
SG IF L I +S ++ + G I L++LV + M+N++++ H+ G
Sbjct: 269 SGAIFGLIGSIFAMMYVSKTFNKKMLGQLLI-----ALVILVGVSLFMSNINIVAHIGGF 323
Query: 202 LSGFAYT 208
+ G T
Sbjct: 324 IGGLLIT 330
>gi|221140031|ref|ZP_03564524.1| peptidase [Staphylococcus aureus subsp. aureus str. JKD6009]
gi|384862151|ref|YP_005744871.1| peptidase, rhomboid family protein [Staphylococcus aureus subsp.
aureus str. JKD6008]
gi|302751380|gb|ADL65557.1| peptidase, rhomboid family protein [Staphylococcus aureus subsp.
aureus str. JKD6008]
Length = 487
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 27/187 (14%)
Query: 30 VIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSLLHVLFNM 84
+I + +C++ ++F ++ L + F V YR TS+ H S H+L NM
Sbjct: 163 IIFVNVLIWLCMILYLNNFSDVKLLDVGGLVHFNVVHGEWYRIVTSMFLHFSFEHILMNM 222
Query: 85 LALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGF 144
L+L G +E I+GS RM + IA L + F L ++G
Sbjct: 223 LSLFIFGKIVEAIIGSWRMLTV------------YFIAGLFGN--FVSLSFNTTTISVGA 268
Query: 145 SGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGI 201
SG IF L I +S ++ + G I L++LV + M+N++++ H+ G
Sbjct: 269 SGAIFGLIGSIFAMMYVSKTFNKKMLGQLLI-----ALVILVGVSLFMSNINIVAHIGGF 323
Query: 202 LSGFAYT 208
+ G T
Sbjct: 324 IGGLLIT 330
>gi|162420860|ref|YP_001608069.1| intramembrane serine protease GlpG [Yersinia pestis Angola]
gi|165928021|ref|ZP_02223853.1| peptidase, S54 (rhomboid) family protein [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165936184|ref|ZP_02224753.1| peptidase, S54 (rhomboid) family protein [Yersinia pestis biovar
Orientalis str. IP275]
gi|166012211|ref|ZP_02233109.1| peptidase, S54 (rhomboid) family protein [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166213454|ref|ZP_02239489.1| peptidase, S54 (rhomboid) family protein [Yersinia pestis biovar
Antiqua str. B42003004]
gi|167399200|ref|ZP_02304724.1| peptidase, S54 (rhomboid) family protein [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167418769|ref|ZP_02310522.1| peptidase, S54 (rhomboid) family protein [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167426515|ref|ZP_02318268.1| peptidase, S54 (rhomboid) family protein [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|270488142|ref|ZP_06205216.1| peptidase, S54 (rhomboid) family protein [Yersinia pestis KIM D27]
gi|294502214|ref|YP_003566276.1| peptidase, S54 (rhomboid) family protein [Yersinia pestis Z176003]
gi|384120697|ref|YP_005503317.1| peptidase, S54 (rhomboid) family protein [Yersinia pestis D106004]
gi|384124576|ref|YP_005507190.1| peptidase, S54 (rhomboid) family protein [Yersinia pestis D182038]
gi|420576962|ref|ZP_15071756.1| rhomboid protease glpG [Yersinia pestis PY-07]
gi|420614554|ref|ZP_15105592.1| rhomboid family protein [Yersinia pestis PY-14]
gi|420625061|ref|ZP_15114923.1| rhomboid protease glpG [Yersinia pestis PY-16]
gi|420635337|ref|ZP_15124184.1| rhomboid protease glpG [Yersinia pestis PY-25]
gi|420657160|ref|ZP_15143914.1| rhomboid protease glpG [Yersinia pestis PY-36]
gi|420667535|ref|ZP_15153228.1| rhomboid family protein [Yersinia pestis PY-45]
gi|420678327|ref|ZP_15163046.1| rhomboid protease glpG [Yersinia pestis PY-47]
gi|420694529|ref|ZP_15177423.1| rhomboid protease glpG [Yersinia pestis PY-53]
gi|420749585|ref|ZP_15225434.1| rhomboid protease glpG [Yersinia pestis PY-65]
gi|420776295|ref|ZP_15248826.1| rhomboid protease glpG [Yersinia pestis PY-88]
gi|420781749|ref|ZP_15253613.1| rhomboid protease glpG [Yersinia pestis PY-89]
gi|420792657|ref|ZP_15263302.1| rhomboid protease glpG [Yersinia pestis PY-91]
gi|420797784|ref|ZP_15267904.1| rhomboid protease glpG [Yersinia pestis PY-92]
gi|420819275|ref|ZP_15287288.1| rhomboid protease glpG [Yersinia pestis PY-96]
gi|420851064|ref|ZP_15315921.1| rhomboid protease glpG [Yersinia pestis PY-103]
gi|420856672|ref|ZP_15320633.1| rhomboid protease glpG [Yersinia pestis PY-113]
gi|162353675|gb|ABX87623.1| peptidase, S54 (rhomboid) family protein [Yersinia pestis Angola]
gi|165915798|gb|EDR34406.1| peptidase, S54 (rhomboid) family protein [Yersinia pestis biovar
Orientalis str. IP275]
gi|165919970|gb|EDR37271.1| peptidase, S54 (rhomboid) family protein [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165988877|gb|EDR41178.1| peptidase, S54 (rhomboid) family protein [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166205395|gb|EDR49875.1| peptidase, S54 (rhomboid) family protein [Yersinia pestis biovar
Antiqua str. B42003004]
gi|166962763|gb|EDR58784.1| peptidase, S54 (rhomboid) family protein [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167051704|gb|EDR63112.1| peptidase, S54 (rhomboid) family protein [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167054503|gb|EDR64311.1| peptidase, S54 (rhomboid) family protein [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|262360293|gb|ACY57014.1| peptidase, S54 (rhomboid) family protein [Yersinia pestis D106004]
gi|262364240|gb|ACY60797.1| peptidase, S54 (rhomboid) family protein [Yersinia pestis D182038]
gi|270336646|gb|EFA47423.1| peptidase, S54 (rhomboid) family protein [Yersinia pestis KIM D27]
gi|294352673|gb|ADE63014.1| peptidase, S54 (rhomboid) family protein [Yersinia pestis Z176003]
gi|391465404|gb|EIR23604.1| rhomboid protease glpG [Yersinia pestis PY-07]
gi|391502009|gb|EIR56358.1| rhomboid family protein [Yersinia pestis PY-14]
gi|391513217|gb|EIR66457.1| rhomboid protease glpG [Yersinia pestis PY-16]
gi|391516317|gb|EIR69226.1| rhomboid protease glpG [Yersinia pestis PY-25]
gi|391545870|gb|EIR95911.1| rhomboid protease glpG [Yersinia pestis PY-36]
gi|391548249|gb|EIR98069.1| rhomboid family protein [Yersinia pestis PY-45]
gi|391563009|gb|EIS11366.1| rhomboid protease glpG [Yersinia pestis PY-47]
gi|391578079|gb|EIS24402.1| rhomboid protease glpG [Yersinia pestis PY-53]
gi|391632253|gb|EIS71801.1| rhomboid protease glpG [Yersinia pestis PY-65]
gi|391663167|gb|EIS99038.1| rhomboid protease glpG [Yersinia pestis PY-88]
gi|391668254|gb|EIT03509.1| rhomboid protease glpG [Yersinia pestis PY-89]
gi|391673182|gb|EIT07931.1| rhomboid protease glpG [Yersinia pestis PY-91]
gi|391688980|gb|EIT22154.1| rhomboid protease glpG [Yersinia pestis PY-92]
gi|391704581|gb|EIT36228.1| rhomboid protease glpG [Yersinia pestis PY-96]
gi|391734655|gb|EIT62903.1| rhomboid protease glpG [Yersinia pestis PY-103]
gi|391737631|gb|EIT65502.1| rhomboid protease glpG [Yersinia pestis PY-113]
Length = 259
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 49/88 (55%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
T +V+++C IY++ L+ G + P Q++R+ + H SLLH+LFN+
Sbjct: 78 LTLSVMVLCIAIYILMLITGDMAVMSWLAWPYNSSQYLQIWRWVSHAFLHFSLLHILFNL 137
Query: 85 LALVPLGSELERIMGSVRMFYITILLAT 112
+ LG ++E+ +G+ ++ +TI+ A
Sbjct: 138 MWWWYLGGQMEKRLGTSKLLVLTIVSAV 165
>gi|49483798|ref|YP_041022.1| hypothetical protein SAR1626 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|282904131|ref|ZP_06312019.1| rhomboid family protein [Staphylococcus aureus subsp. aureus C160]
gi|282905958|ref|ZP_06313813.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282908868|ref|ZP_06316686.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|283958313|ref|ZP_06375764.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
A017934/97]
gi|295428127|ref|ZP_06820759.1| hypothetical protein SIAG_00655 [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297590907|ref|ZP_06949545.1| rhomboid family protein [Staphylococcus aureus subsp. aureus MN8]
gi|415682351|ref|ZP_11447667.1| hypothetical protein CGSSa00_07270 [Staphylococcus aureus subsp.
aureus CGS00]
gi|417887902|ref|ZP_12532021.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21195]
gi|418564826|ref|ZP_13129247.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21264]
gi|418582476|ref|ZP_13146554.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1605]
gi|418597192|ref|ZP_13160725.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21342]
gi|418601009|ref|ZP_13164457.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21345]
gi|418901054|ref|ZP_13455110.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1214]
gi|418909401|ref|ZP_13463397.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG149]
gi|418923231|ref|ZP_13477147.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1233]
gi|418982555|ref|ZP_13530263.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1242]
gi|418986221|ref|ZP_13533906.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1500]
gi|49241927|emb|CAG40621.1| putative membrane protein [Staphylococcus aureus subsp. aureus
MRSA252]
gi|282327132|gb|EFB57427.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282331250|gb|EFB60764.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282595749|gb|EFC00713.1| rhomboid family protein [Staphylococcus aureus subsp. aureus C160]
gi|283790462|gb|EFC29279.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
A017934/97]
gi|295128485|gb|EFG58119.1| hypothetical protein SIAG_00655 [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297575793|gb|EFH94509.1| rhomboid family protein [Staphylococcus aureus subsp. aureus MN8]
gi|315195451|gb|EFU25838.1| hypothetical protein CGSSa00_07270 [Staphylococcus aureus subsp.
aureus CGS00]
gi|341856931|gb|EGS97758.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21195]
gi|371975963|gb|EHO93255.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21264]
gi|374395428|gb|EHQ66695.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21342]
gi|374400256|gb|EHQ71375.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21345]
gi|377702451|gb|EHT26773.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1214]
gi|377704265|gb|EHT28575.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1500]
gi|377704836|gb|EHT29145.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1242]
gi|377710886|gb|EHT35124.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1605]
gi|377735190|gb|EHT59226.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1233]
gi|377752048|gb|EHT75972.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG149]
Length = 487
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 27/187 (14%)
Query: 30 VIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSLLHVLFNM 84
+I + +C++ ++F ++ L + F V YR TS+ H S H+L NM
Sbjct: 163 IIFVNVLIWLCMILYLNNFSDVKLLDVGGLVHFNVVHGEWYRIVTSMFLHFSFEHILMNM 222
Query: 85 LALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGF 144
L+L G +E I+GS RM + IA L + F L ++G
Sbjct: 223 LSLFIFGKIVEAIIGSWRMLTV------------YFIAGLFGN--FVSLSFNTTTISVGA 268
Query: 145 SGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGI 201
SG IF L I +S ++ + G I L++LV + M+N++++ H+ G
Sbjct: 269 SGAIFGLIGSIFAMMYVSKTFNKKMLGQLLI-----ALVILVGVSLFMSNINIVAHIGGF 323
Query: 202 LSGFAYT 208
+ G T
Sbjct: 324 IGGLLIT 330
>gi|148268033|ref|YP_001246976.1| rhomboid family protein [Staphylococcus aureus subsp. aureus JH9]
gi|150394101|ref|YP_001316776.1| rhomboid family protein [Staphylococcus aureus subsp. aureus JH1]
gi|257793625|ref|ZP_05642604.1| rhomboid family protein [Staphylococcus aureus A9781]
gi|258411075|ref|ZP_05681355.1| rhomboid family protein [Staphylococcus aureus A9763]
gi|258420121|ref|ZP_05683076.1| rhomboid family protein [Staphylococcus aureus A9719]
gi|258446794|ref|ZP_05694948.1| rhomboid family protein [Staphylococcus aureus A6300]
gi|258448708|ref|ZP_05696820.1| rhomboid family protein [Staphylococcus aureus A6224]
gi|258453525|ref|ZP_05701503.1| rhomboid family protein [Staphylococcus aureus A5937]
gi|282928182|ref|ZP_06335787.1| rhomboid family protein [Staphylococcus aureus A10102]
gi|295406672|ref|ZP_06816477.1| rhomboid family protein [Staphylococcus aureus A8819]
gi|297245746|ref|ZP_06929611.1| rhomboid family protein [Staphylococcus aureus A8796]
gi|384864770|ref|YP_005750129.1| rhomboid family protein [Staphylococcus aureus subsp. aureus ECT-R
2]
gi|387150692|ref|YP_005742256.1| Putative membrane peptidase, contains TPR repeat domain
[Staphylococcus aureus 04-02981]
gi|415692667|ref|ZP_11454587.1| Rhomboid family protein [Staphylococcus aureus subsp. aureus CGS03]
gi|417651337|ref|ZP_12301100.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21172]
gi|418424698|ref|ZP_12997812.1| hypothetical protein MQA_00546 [Staphylococcus aureus subsp. aureus
VRS1]
gi|418427692|ref|ZP_13000697.1| hypothetical protein MQC_00501 [Staphylococcus aureus subsp. aureus
VRS2]
gi|418433677|ref|ZP_13006269.1| hypothetical protein MQG_01236 [Staphylococcus aureus subsp. aureus
VRS4]
gi|418437172|ref|ZP_13008968.1| hypothetical protein MQI_01256 [Staphylococcus aureus subsp. aureus
VRS5]
gi|418440072|ref|ZP_13011773.1| hypothetical protein MQK_01111 [Staphylococcus aureus subsp. aureus
VRS6]
gi|418443090|ref|ZP_13014689.1| hypothetical protein MQM_01203 [Staphylococcus aureus subsp. aureus
VRS7]
gi|418446152|ref|ZP_13017626.1| hypothetical protein MQO_01783 [Staphylococcus aureus subsp. aureus
VRS8]
gi|418449166|ref|ZP_13020552.1| hypothetical protein MQQ_01563 [Staphylococcus aureus subsp. aureus
VRS9]
gi|418451979|ref|ZP_13023313.1| hypothetical protein MQS_00457 [Staphylococcus aureus subsp. aureus
VRS10]
gi|418454973|ref|ZP_13026232.1| hypothetical protein MQU_01088 [Staphylococcus aureus subsp. aureus
VRS11a]
gi|418457851|ref|ZP_13029050.1| hypothetical protein MQW_01368 [Staphylococcus aureus subsp. aureus
VRS11b]
gi|418640342|ref|ZP_13202574.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-3]
gi|418878467|ref|ZP_13432702.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1165]
gi|418881233|ref|ZP_13435450.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1213]
gi|418884081|ref|ZP_13438274.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1769]
gi|418895312|ref|ZP_13449407.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1057]
gi|418991477|ref|ZP_13539138.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1096]
gi|419784633|ref|ZP_14310396.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-M]
gi|147741102|gb|ABQ49400.1| Rhomboid family protein [Staphylococcus aureus subsp. aureus JH9]
gi|149946553|gb|ABR52489.1| Rhomboid family protein [Staphylococcus aureus subsp. aureus JH1]
gi|257787597|gb|EEV25937.1| rhomboid family protein [Staphylococcus aureus A9781]
gi|257840225|gb|EEV64689.1| rhomboid family protein [Staphylococcus aureus A9763]
gi|257843832|gb|EEV68226.1| rhomboid family protein [Staphylococcus aureus A9719]
gi|257854369|gb|EEV77318.1| rhomboid family protein [Staphylococcus aureus A6300]
gi|257857986|gb|EEV80875.1| rhomboid family protein [Staphylococcus aureus A6224]
gi|257864256|gb|EEV87006.1| rhomboid family protein [Staphylococcus aureus A5937]
gi|282589989|gb|EFB95071.1| rhomboid family protein [Staphylococcus aureus A10102]
gi|285817231|gb|ADC37718.1| Putative membrane peptidase, contains TPR repeat domain
[Staphylococcus aureus 04-02981]
gi|294968419|gb|EFG44443.1| rhomboid family protein [Staphylococcus aureus A8819]
gi|297177397|gb|EFH36649.1| rhomboid family protein [Staphylococcus aureus A8796]
gi|312829937|emb|CBX34779.1| rhomboid family protein [Staphylococcus aureus subsp. aureus ECT-R
2]
gi|315129827|gb|EFT85817.1| Rhomboid family protein [Staphylococcus aureus subsp. aureus CGS03]
gi|329727521|gb|EGG63977.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21172]
gi|375014906|gb|EHS08577.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-3]
gi|377694589|gb|EHT18954.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1165]
gi|377695118|gb|EHT19482.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1057]
gi|377714416|gb|EHT38617.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1769]
gi|377723599|gb|EHT47724.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1096]
gi|377730976|gb|EHT55034.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1213]
gi|383363843|gb|EID41169.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-M]
gi|387717980|gb|EIK05975.1| hypothetical protein MQC_00501 [Staphylococcus aureus subsp. aureus
VRS2]
gi|387719477|gb|EIK07422.1| hypothetical protein MQA_00546 [Staphylococcus aureus subsp. aureus
VRS1]
gi|387724901|gb|EIK12532.1| hypothetical protein MQG_01236 [Staphylococcus aureus subsp. aureus
VRS4]
gi|387727160|gb|EIK14692.1| hypothetical protein MQI_01256 [Staphylococcus aureus subsp. aureus
VRS5]
gi|387730222|gb|EIK17629.1| hypothetical protein MQK_01111 [Staphylococcus aureus subsp. aureus
VRS6]
gi|387735290|gb|EIK22419.1| hypothetical protein MQO_01783 [Staphylococcus aureus subsp. aureus
VRS8]
gi|387736766|gb|EIK23854.1| hypothetical protein MQM_01203 [Staphylococcus aureus subsp. aureus
VRS7]
gi|387736929|gb|EIK24015.1| hypothetical protein MQQ_01563 [Staphylococcus aureus subsp. aureus
VRS9]
gi|387744860|gb|EIK31624.1| hypothetical protein MQS_00457 [Staphylococcus aureus subsp. aureus
VRS10]
gi|387745026|gb|EIK31788.1| hypothetical protein MQU_01088 [Staphylococcus aureus subsp. aureus
VRS11a]
gi|387746619|gb|EIK33348.1| hypothetical protein MQW_01368 [Staphylococcus aureus subsp. aureus
VRS11b]
Length = 487
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 27/187 (14%)
Query: 30 VIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSLLHVLFNM 84
+I + +C++ ++F ++ L + F V YR TS+ H S H+L NM
Sbjct: 163 IIFVNVLIWLCMILYLNNFSDVKLLDVGGLVHFNVVHGEWYRIVTSMFLHFSFEHILMNM 222
Query: 85 LALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGF 144
L+L G +E I+GS RM + IA L + F L ++G
Sbjct: 223 LSLFIFGKIVEAIIGSWRMLTV------------YFIAGLFGN--FVSLSFNTTTISVGA 268
Query: 145 SGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGI 201
SG IF L I +S ++ + G I L++LV + M+N++++ H+ G
Sbjct: 269 SGAIFGLIGSIFAMMYVSKTFNKKMLGQLLI-----ALVILVGVSLFMSNINIVAHIGGF 323
Query: 202 LSGFAYT 208
+ G T
Sbjct: 324 IGGLLIT 330
>gi|385680095|ref|ZP_10054023.1| membrane protein [Amycolatopsis sp. ATCC 39116]
Length = 256
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 73/158 (46%), Gaps = 21/158 (13%)
Query: 48 FYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYIT 107
F + P A+ + +R S H +H+ NMLAL LG ++E ++G VR T
Sbjct: 60 FGDGVLWPLAIAGEDEWWRLVMSGFLHYGPIHLAVNMLALWILGRDMETLLGRVRF---T 116
Query: 108 ILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVF 167
+L L++LL + Y V D G SG I+ L+ GA +V
Sbjct: 117 VL---------YLVSLLGGAVAVYLFDGV-DRGTAGASGAIYGLL-------GAMLVAVI 159
Query: 168 GLFNIPAKWYPLILL-VLFQVLMTNVSLLGHLCGILSG 204
L PA I+L ++ V + N+SLLGHL G++ G
Sbjct: 160 RLRLNPAYAIGTIVLNLIITVSLPNISLLGHLGGLVVG 197
>gi|375105058|ref|ZP_09751319.1| putative membrane protein [Burkholderiales bacterium JOSHI_001]
gi|374665789|gb|EHR70574.1| putative membrane protein [Burkholderiales bacterium JOSHI_001]
Length = 195
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 91/191 (47%), Gaps = 21/191 (10%)
Query: 22 IPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVL 81
+P T A++++C +Y CL + L +F ++ ++ HGS++H+L
Sbjct: 4 LPPVTQALMLICTAMY--CLGVFWPGIEGPLALWPIGSGQFYPWQLFSYAFLHGSMMHLL 61
Query: 82 FNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECA 141
FNML L GSELER+ G R ++ + A + A++ LL +V +
Sbjct: 62 FNMLGLWMFGSELERLWGPKRYRHMLVAGAVAAALVQLLFNFVVGSL----------APT 111
Query: 142 IGFSGVIFSLIVIETSLSGAQSRSVFGLF-NIPAKWYPLIL----LVLFQVLM--TNVSL 194
+G SG +F+L++ L ++++ LF IP K ++ L L Q L + V+
Sbjct: 112 VGASGALFALLLSYGMLF--PNKTIMPLFPPIPMKARTFVMVFGGLELLQGLTGGSGVAH 169
Query: 195 LGHLCGILSGF 205
HL G+L F
Sbjct: 170 FAHLGGMLGAF 180
>gi|422746158|ref|ZP_16800091.1| peptidase, S54 family protein [Staphylococcus aureus subsp. aureus
MRSA131]
gi|320140566|gb|EFW32420.1| peptidase, S54 family protein [Staphylococcus aureus subsp. aureus
MRSA131]
Length = 487
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 27/187 (14%)
Query: 30 VIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSLLHVLFNM 84
+I + +C++ ++F ++ L + F V YR TS+ H S H+L NM
Sbjct: 163 IIFVNVLIWLCMILYLNNFSDVKLLDVGGLVHFNVVHGEWYRIVTSMFLHFSFEHILMNM 222
Query: 85 LALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGF 144
L+L G +E I+GS RM + IA L + F L ++G
Sbjct: 223 LSLFIFGKIVEAIIGSWRMLTV------------YFIAGLFGN--FVSLSFNTTTISVGA 268
Query: 145 SGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGI 201
SG IF L I +S ++ + G I L++LV + M+N++++ H+ G
Sbjct: 269 SGAIFGLIGSIFAMMYVSKTFNKKMLGQLLI-----ALVILVGVSLFMSNINIVAHIGGF 323
Query: 202 LSGFAYT 208
+ G T
Sbjct: 324 IGGLLIT 330
>gi|384550376|ref|YP_005739628.1| peptidase, rhomboid family protein [Staphylococcus aureus subsp.
aureus JKD6159]
gi|302333225|gb|ADL23418.1| peptidase, rhomboid family protein [Staphylococcus aureus subsp.
aureus JKD6159]
Length = 487
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 27/187 (14%)
Query: 30 VIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSLLHVLFNM 84
+I + +C++ ++F ++ L + F V YR TS+ H S H+L NM
Sbjct: 163 IIFVNVLIWLCMILYLNNFSDVKLLDVGGLVHFNVVHGEWYRIVTSMFLHFSFEHILMNM 222
Query: 85 LALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGF 144
L+L G +E I+GS RM + IA L + F L ++G
Sbjct: 223 LSLFIFGKIVEAIIGSWRMLTV------------YFIAGLFGN--FVSLSFNTTTISVGA 268
Query: 145 SGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGI 201
SG IF L I +S ++ + G I L++LV + M+N++++ H+ G
Sbjct: 269 SGAIFGLIGSIFAMMYVSKTFNKKMLGQLLI-----ALVILVGVSLFMSNINIVAHIGGF 323
Query: 202 LSGFAYT 208
+ G T
Sbjct: 324 IGGLLIT 330
>gi|258423202|ref|ZP_05686095.1| conserved hypothetical protein [Staphylococcus aureus A9635]
gi|417889989|ref|ZP_12534068.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21200]
gi|418284049|ref|ZP_12896781.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21202]
gi|418558986|ref|ZP_13123533.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21252]
gi|418889364|ref|ZP_13443497.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1524]
gi|257846652|gb|EEV70673.1| conserved hypothetical protein [Staphylococcus aureus A9635]
gi|341855682|gb|EGS96526.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21200]
gi|365164913|gb|EHM56743.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21202]
gi|371976336|gb|EHO93626.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21252]
gi|377752872|gb|EHT76790.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1524]
Length = 487
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 27/187 (14%)
Query: 30 VIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSLLHVLFNM 84
+I + +C++ ++F ++ L + F V YR TS+ H S H+L NM
Sbjct: 163 IIFVNVLIWLCMILYLNNFSDVKLLDVGGLVHFNVVHGEWYRIVTSMFLHFSFEHILMNM 222
Query: 85 LALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGF 144
L+L G +E I+GS RM + IA L + F L ++G
Sbjct: 223 LSLFIFGKIVEAIIGSWRMLTV------------YFIAGLFGN--FVSLSFNTTTISVGA 268
Query: 145 SGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGI 201
SG IF L I +S ++ + G I L++LV + M+N++++ H+ G
Sbjct: 269 SGAIFGLIGSIFAMMYVSKTFNKKMLGQLLI-----ALVILVGVSLFMSNINIVAHIGGF 323
Query: 202 LSGFAYT 208
+ G T
Sbjct: 324 IGGLLIT 330
>gi|420354917|ref|ZP_14855994.1| rhomboid protease glpG [Shigella boydii 4444-74]
gi|391274126|gb|EIQ32940.1| rhomboid protease glpG [Shigella boydii 4444-74]
Length = 276
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T V+I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 97 TWVVMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLL 156
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ ALL ++ Q G S
Sbjct: 157 WWWYLGGAVEKRLGSGKLIVIT-----------LISALLSGYVQ----QKFSGPWFGGLS 201
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 202 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIIAGWFD-----LFGMSMANGA--- 253
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 254 HIAGLAVGLAMAF 266
>gi|345007980|ref|YP_004810334.1| rhomboid family protein [Streptomyces violaceusniger Tu 4113]
gi|344034329|gb|AEM80054.1| Rhomboid family protein [Streptomyces violaceusniger Tu 4113]
Length = 294
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 70/155 (45%), Gaps = 19/155 (12%)
Query: 59 ISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILH 118
++ Q +R TSI H L+H+ FNML+L +G LE +G VR + IL + L
Sbjct: 125 VAEGQWWRLVTSIFLHQQLIHIAFNMLSLWWIGGPLEAALGRVRFIVLYILSGLGGSALS 184
Query: 119 LLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYP 178
L+A ++ ++G SG IF L+ L R + + + A
Sbjct: 185 YLLA-------------AQNQPSLGASGAIFGLLGATAVL---MRRLNYDMRPVIAL--- 225
Query: 179 LILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFN 213
L L +LF + ++ H+ G+++G YG +
Sbjct: 226 LALNLLFTFTWSGIAWQAHVGGLVAGTVVAYGMVH 260
>gi|418931854|ref|ZP_13485689.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1750]
gi|377713032|gb|EHT37245.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1750]
Length = 470
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 27/187 (14%)
Query: 30 VIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSLLHVLFNM 84
+I + +C++ ++F ++ L + F V YR TS+ H S H+L NM
Sbjct: 146 IIFVNVLIWLCMILYLNNFSDVKLLDVGGLVHFNVVHGEWYRIVTSMFLHFSFEHILMNM 205
Query: 85 LALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGF 144
L+L G +E I+GS RM + IA L + F L ++G
Sbjct: 206 LSLFIFGKIVEAIIGSWRMLTV------------YFIAGLFGN--FVSLSFNTTTISVGA 251
Query: 145 SGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGI 201
SG IF L I +S ++ + G I L++LV + M+N++++ H+ G
Sbjct: 252 SGAIFGLIGSIFAMMYVSKTFNKKMLGQLLI-----ALVILVGVSLFMSNINIVAHIGGF 306
Query: 202 LSGFAYT 208
+ G T
Sbjct: 307 IGGLLIT 313
>gi|379021331|ref|YP_005297993.1| putative membrane peptidase, contains TPRrepeat domain
[Staphylococcus aureus subsp. aureus M013]
gi|418562599|ref|ZP_13127056.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21262]
gi|359830640|gb|AEV78618.1| Putative membrane peptidase, contains TPRrepeat domain
[Staphylococcus aureus subsp. aureus M013]
gi|371973703|gb|EHO91051.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21262]
Length = 487
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 27/187 (14%)
Query: 30 VIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSLLHVLFNM 84
+I + +C++ ++F ++ L + F V YR TS+ H S H+L NM
Sbjct: 163 IIFVNVLIWLCMILYLNNFSDVKLLDVGGLVHFNVVHGEWYRIVTSMFLHFSFEHILMNM 222
Query: 85 LALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGF 144
L+L G +E I+GS RM + IA L + F L ++G
Sbjct: 223 LSLFIFGKIVEAIIGSWRMLTV------------YFIAGLFGN--FVSLSFNTTTISVGA 268
Query: 145 SGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGI 201
SG IF L I +S ++ + G I L++LV + M+N++++ H+ G
Sbjct: 269 SGAIFGLIGSIFAMMYVSKTFNKKMLGQLLI-----SLVILVGVSLFMSNINIVAHIGGF 323
Query: 202 LSGFAYT 208
+ G T
Sbjct: 324 IGGLLIT 330
>gi|420582291|ref|ZP_15076609.1| rhomboid protease glpG [Yersinia pestis PY-08]
gi|420830190|ref|ZP_15297094.1| rhomboid protease glpG [Yersinia pestis PY-99]
gi|420840131|ref|ZP_15306079.1| rhomboid protease glpG [Yersinia pestis PY-101]
gi|391466895|gb|EIR24926.1| rhomboid protease glpG [Yersinia pestis PY-08]
gi|391716123|gb|EIT46601.1| rhomboid protease glpG [Yersinia pestis PY-99]
gi|391721380|gb|EIT51319.1| rhomboid protease glpG [Yersinia pestis PY-101]
Length = 262
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 49/88 (55%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
T +V+++C IY++ L+ G + P Q++R+ + H SLLH+LFN+
Sbjct: 81 LTLSVMVLCIAIYILMLITGDMAVMSWLAWPYNSSQYLQIWRWVSHAFLHFSLLHILFNL 140
Query: 85 LALVPLGSELERIMGSVRMFYITILLAT 112
+ LG ++E+ +G+ ++ +TI+ A
Sbjct: 141 MWWWYLGGQMEKRLGTSKLLVLTIVSAV 168
>gi|418906494|ref|ZP_13460520.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIGC345D]
gi|418928899|ref|ZP_13482785.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1612]
gi|377738811|gb|EHT62820.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1612]
gi|377763399|gb|EHT87255.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIGC345D]
Length = 470
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 27/187 (14%)
Query: 30 VIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSLLHVLFNM 84
+I + +C++ ++F ++ L + F V YR TS+ H S H+L NM
Sbjct: 146 IIFVNVLIWLCMILYLNNFSDVKLLDVGGLVHFNVVHGEWYRIVTSMFLHFSFEHILMNM 205
Query: 85 LALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGF 144
L+L G +E I+GS RM + IA L + F L ++G
Sbjct: 206 LSLFIFGKIVEAIIGSWRMLTV------------YFIAGLFGN--FVSLSFNTTTISVGA 251
Query: 145 SGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGI 201
SG IF L I +S ++ + G I L++LV + M+N++++ H+ G
Sbjct: 252 SGAIFGLIGSIFAMMYVSKTFNKKMLGQLLI-----ALVILVGVSLFMSNINIVAHIGGF 306
Query: 202 LSGFAYT 208
+ G T
Sbjct: 307 IGGLLIT 313
>gi|386729250|ref|YP_006195633.1| integral membrane protein (Rhomboid family) [Staphylococcus aureus
subsp. aureus 71193]
gi|387602889|ref|YP_005734410.1| rhomboid family protein [Staphylococcus aureus subsp. aureus ST398]
gi|404478900|ref|YP_006710330.1| hypothetical protein C248_1592 [Staphylococcus aureus 08BA02176]
gi|418309989|ref|ZP_12921539.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21331]
gi|418978272|ref|ZP_13526073.1| Integral membrane protein (Rhomboid family) [Staphylococcus aureus
subsp. aureus DR10]
gi|283470827|emb|CAQ50038.1| rhomboid family protein [Staphylococcus aureus subsp. aureus ST398]
gi|365237446|gb|EHM78292.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21331]
gi|379993888|gb|EIA15333.1| Integral membrane protein (Rhomboid family) [Staphylococcus aureus
subsp. aureus DR10]
gi|384230543|gb|AFH69790.1| Integral membrane protein (Rhomboid family) [Staphylococcus aureus
subsp. aureus 71193]
gi|404440389|gb|AFR73582.1| putative membrane protein [Staphylococcus aureus 08BA02176]
Length = 487
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 27/187 (14%)
Query: 30 VIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSLLHVLFNM 84
+I + +C++ ++F ++ L + F V YR TS+ H S H+L NM
Sbjct: 163 IIFVNVLIWLCMILYLNNFSDVKLLDVGGLVHFNVVHGEWYRIVTSMFLHFSFEHILMNM 222
Query: 85 LALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGF 144
L+L G +E I+GS RM + IA L + F L ++G
Sbjct: 223 LSLFIFGKIVEAIIGSWRMLTV------------YFIAGLFGN--FVSLSFNTTTISVGA 268
Query: 145 SGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGI 201
SG IF L I +S ++ + G I L++LV + M+N++++ H+ G
Sbjct: 269 SGAIFGLIGSIFAMMYVSKTFNKKMLGQLLI-----ALVILVGVSLFMSNINIVAHIGGF 323
Query: 202 LSGFAYT 208
+ G T
Sbjct: 324 IGGLLIT 330
>gi|366161751|ref|ZP_09461613.1| intramembrane serine protease GlpG [Escherichia sp. TW09308]
Length = 276
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T V+I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 97 TWVVMIACVLVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLL 156
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ ALL ++ Q G S
Sbjct: 157 WWWYLGGAVEKRLGSGKLIVIT-----------LISALLSGYVQ----QKFSGPWFGGLS 201
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 202 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFD-----LFGMSMANGA--- 253
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 254 HIAGLAVGLAMAF 266
>gi|42525643|ref|NP_970741.1| rhomboid [Treponema denticola ATCC 35405]
gi|422340835|ref|ZP_16421776.1| rhomboid family protein [Treponema denticola F0402]
gi|449103871|ref|ZP_21740614.1| hypothetical protein HMPREF9730_01511 [Treponema denticola AL-2]
gi|449106028|ref|ZP_21742720.1| hypothetical protein HMPREF9729_00985 [Treponema denticola ASLM]
gi|449108116|ref|ZP_21744760.1| hypothetical protein HMPREF9722_00456 [Treponema denticola ATCC
33520]
gi|449110633|ref|ZP_21747233.1| hypothetical protein HMPREF9735_00282 [Treponema denticola ATCC
33521]
gi|449114556|ref|ZP_21751033.1| hypothetical protein HMPREF9721_01551 [Treponema denticola ATCC
35404]
gi|449118805|ref|ZP_21755206.1| hypothetical protein HMPREF9725_00671 [Treponema denticola H1-T]
gi|449121194|ref|ZP_21757546.1| hypothetical protein HMPREF9727_00306 [Treponema denticola MYR-T]
gi|449124938|ref|ZP_21761255.1| hypothetical protein HMPREF9723_01299 [Treponema denticola OTK]
gi|449129942|ref|ZP_21766170.1| hypothetical protein HMPREF9724_00835 [Treponema denticola SP37]
gi|451967767|ref|ZP_21920996.1| hypothetical protein HMPREF9728_00162 [Treponema denticola US-Trep]
gi|41815654|gb|AAS10622.1| rhomboid family protein [Treponema denticola ATCC 35405]
gi|325475239|gb|EGC78424.1| rhomboid family protein [Treponema denticola F0402]
gi|448940621|gb|EMB21526.1| hypothetical protein HMPREF9723_01299 [Treponema denticola OTK]
gi|448944577|gb|EMB25455.1| hypothetical protein HMPREF9724_00835 [Treponema denticola SP37]
gi|448951420|gb|EMB32233.1| hypothetical protein HMPREF9727_00306 [Treponema denticola MYR-T]
gi|448951833|gb|EMB32642.1| hypothetical protein HMPREF9725_00671 [Treponema denticola H1-T]
gi|448956181|gb|EMB36943.1| hypothetical protein HMPREF9721_01551 [Treponema denticola ATCC
35404]
gi|448960007|gb|EMB40724.1| hypothetical protein HMPREF9735_00282 [Treponema denticola ATCC
33521]
gi|448961966|gb|EMB42660.1| hypothetical protein HMPREF9722_00456 [Treponema denticola ATCC
33520]
gi|448964324|gb|EMB44996.1| hypothetical protein HMPREF9730_01511 [Treponema denticola AL-2]
gi|448966596|gb|EMB47251.1| hypothetical protein HMPREF9729_00985 [Treponema denticola ASLM]
gi|451703553|gb|EMD57919.1| hypothetical protein HMPREF9728_00162 [Treponema denticola US-Trep]
Length = 209
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 70/158 (44%), Gaps = 13/158 (8%)
Query: 54 LPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATS 113
+P V+ ++F+T HG H+ FNMLAL G +ER +G+ +L+ T
Sbjct: 43 VPILVVEAQTYWQFFTYQFVHGDFFHLAFNMLALFFFGVPVERKIGTKEFILYYLLIGTI 102
Query: 114 NAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIP 173
IL L+ Y IG SG IF ++++ L ++G+ +P
Sbjct: 103 GGILSFLV---------YAATGFYTITLIGASGAIFGVLLLYAVLYPNSVIYIWGVIPVP 153
Query: 174 AKW----YPLILLVLFQVLMTNVSLLGHLCGILSGFAY 207
A Y +I L+ + V+ L H G+++G+ Y
Sbjct: 154 APLLILGYAVIELISIFSIGDGVAHLTHFIGLIAGWVY 191
>gi|407036589|gb|EKE38247.1| peptidase S54 (rhomboid) family protein [Entamoeba nuttalli P19]
Length = 266
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 66/143 (46%), Gaps = 17/143 (11%)
Query: 74 HGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRL 133
H + H+ N ++L+ G+ +E+ +G+ R+ + IL IL I + L
Sbjct: 71 HEGIFHLFGNSISLLVFGALVEKKIGTTRVILLFILSIVLQPILM---------ISLFSL 121
Query: 134 QNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFG-LFNIPAKWYPLILLVLFQVLMTNV 192
+ +G SG IF+LI+I G V+ + NI + L+LL V
Sbjct: 122 KLASGNSVVGISGYIFTLIIIFYYQPGKYMDIVYCCVLNIITYIFSLLLL-------AQV 174
Query: 193 SLLGHLCGILSGFAYTYGFFNLL 215
SL GH CGI+ G YT GF + L
Sbjct: 175 SLSGHFCGIIIGVLYTRGFLDWL 197
>gi|297288117|ref|XP_001114944.2| PREDICTED: rhomboid domain-containing protein 2-like [Macaca
mulatta]
Length = 468
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 7/153 (4%)
Query: 54 LPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATS 113
L S + +QVYR T I + + + +L + + ER +G+VR + T++ A
Sbjct: 184 LKSEALRNWQVYRLVTYIFVYENPISLLCGAIIIWRFAGNFERTVGTVRHCFFTVIFAIF 243
Query: 114 NAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIP 173
+AI+ L + + +L V D A GF+ V F+++ + T S + VFG+ +P
Sbjct: 244 SAIIFLSFEAVSS---LSKLGEVED--ARGFTPVAFAMLGVTTVRSRMRRALVFGMV-VP 297
Query: 174 AKWYPLILLVLFQVLMTNVSLLGHLCGILSGFA 206
+ P +LL L+ S L ++CG+ G A
Sbjct: 298 SVLVPWLLLGA-SWLIPQTSFLSNVCGLSIGLA 329
>gi|423122498|ref|ZP_17110182.1| rhomboid protease glpG [Klebsiella oxytoca 10-5246]
gi|376392315|gb|EHT04980.1| rhomboid protease glpG [Klebsiella oxytoca 10-5246]
Length = 276
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 51/87 (58%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
FT A+++VC ++++ + G + P +F+V+R+++ H SL+H+LFN+
Sbjct: 96 FTWAILLVCILVFVLQNIIGDRPIMLLLAWPYDPSLKFEVWRYFSHAFMHFSLMHILFNL 155
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
L LG +E+ +G+ ++ IT++ A
Sbjct: 156 LWWWYLGGAVEKRIGTGKLVVITVISA 182
>gi|338730738|ref|YP_004660130.1| Rhomboid family protein [Thermotoga thermarum DSM 5069]
gi|335365089|gb|AEH51034.1| Rhomboid family protein [Thermotoga thermarum DSM 5069]
Length = 230
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 70/147 (47%), Gaps = 16/147 (10%)
Query: 65 YRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALL 124
YR T++ HG LLH+LFN AL G+ +E I G+ + F I LLA + + L
Sbjct: 54 YRVITAMFVHGGLLHLLFNSYALFYFGTIVESIYGTEK-FVIFYLLAGA-------VGNL 105
Query: 125 VAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVL 184
H+ +YR ++G SG IF L+ I +L + +F P+I+ +
Sbjct: 106 ATHVFYYR------SISVGASGAIFGLVGILFALGFRRDTPIFMRQFTGMALLPMIIFNV 159
Query: 185 FQVLM--TNVSLLGHLCGILSGFAYTY 209
M +N++ HL G L+G A Y
Sbjct: 160 VYGFMPGSNINNAAHLGGFLAGMAIGY 186
>gi|431898174|gb|ELK06869.1| Rhomboid domain-containing protein 2 [Pteropus alecto]
Length = 364
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 75/154 (48%), Gaps = 7/154 (4%)
Query: 54 LPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATS 113
L S + +QVYR T I + + + +L + + ER +G+VR + T++ A
Sbjct: 50 LRSDCLRNWQVYRLVTYIFVYENPVSLLCGAIIIWRFAGNFERTVGTVRHCFFTVIFALF 109
Query: 114 NAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIP 173
+AI+ L + + +L V D A GF+ V F+++ + S + VFG+ +P
Sbjct: 110 SAIIFLSFEAVSS---LSKLGEVED--ARGFTPVAFAMLGVNAVRSRMRRALVFGMV-VP 163
Query: 174 AKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAY 207
+ P +LL L+ S L ++CG+ G AY
Sbjct: 164 SLLVPWLLLCA-SWLIPQTSFLSNVCGLGIGLAY 196
>gi|293193637|ref|ZP_06609859.1| rhomboid family protein [Actinomyces odontolyticus F0309]
gi|292819869|gb|EFF78872.1| rhomboid family protein [Actinomyces odontolyticus F0309]
Length = 292
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 90/198 (45%), Gaps = 23/198 (11%)
Query: 23 PFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLF 82
P T A++ +C +Y++ LL + +P+ +++ + T HG ++H+LF
Sbjct: 74 PVVTYAMMAICVLMYVVTLLAPTTKL-SLALVPAWLMA--HPWTVLTGAFLHGGIMHILF 130
Query: 83 NMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAI 142
NML+L +G +E ++G R + ++ A + L+ L+ F +
Sbjct: 131 NMLSLYWVGRAIEPVLGRWRFLTLYLVSALGGSAFILVWCLIQPSEIFVS--------TV 182
Query: 143 GFSGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLC 199
G SG +F L + + L G+ + ++ L I +++ +++ +S GH+
Sbjct: 183 GASGAVFGLFGAVFVLQRLGGSDTTAILTLLGIN---------LVYGFMVSGISWQGHIG 233
Query: 200 GILSGFAYTYGFFNLLMP 217
G ++G T+ ++ P
Sbjct: 234 GAIAGVGATWVLVHMARP 251
>gi|384867478|ref|YP_005747674.1| rhomboid family protein [Staphylococcus aureus subsp. aureus TCH60]
gi|417901080|ref|ZP_12544957.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21266]
gi|418652792|ref|ZP_13214755.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-99]
gi|418955633|ref|ZP_13507570.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-189]
gi|312437983|gb|ADQ77054.1| rhomboid family protein [Staphylococcus aureus subsp. aureus TCH60]
gi|341846239|gb|EGS87436.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21266]
gi|375020960|gb|EHS14467.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-99]
gi|375370719|gb|EHS74517.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-189]
Length = 426
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 27/187 (14%)
Query: 30 VIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSLLHVLFNM 84
+I + +C++ ++F ++ L + F V YR TS+ H S H+L NM
Sbjct: 102 IIFVNVLIWLCMILYLNNFSDVKLLDVGGLVHFNVVHGEWYRIVTSMFLHFSFEHILMNM 161
Query: 85 LALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGF 144
L+L G +E I+GS RM + IA L + F L ++G
Sbjct: 162 LSLFIFGKIVEAIIGSWRMLTV------------YFIAGLFGN--FVSLSFNTTTISVGA 207
Query: 145 SGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGI 201
SG IF L I +S ++ + G I L++LV + M+N++++ H+ G
Sbjct: 208 SGAIFGLIGSIFAMMYVSKTFNKKMLGQLLI-----ALVILVGVSLFMSNINIVAHIGGF 262
Query: 202 LSGFAYT 208
+ G T
Sbjct: 263 IGGLLIT 269
>gi|224132770|ref|XP_002327876.1| predicted protein [Populus trichocarpa]
gi|222837285|gb|EEE75664.1| predicted protein [Populus trichocarpa]
Length = 199
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 37/205 (18%)
Query: 105 YITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSR 164
Y +L+ S A++ + +L+ ++L+ A+G+S V+F + I + +
Sbjct: 26 YTLVLVVLSGALVLGMYHILIQR---FKLEYFRRVTAVGYSCVVFGWMTILSVKQPSSKL 82
Query: 165 SVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSA 224
+FG ++P + P L+ +++ S LGHL GI+ G+A +G L+ G + + A
Sbjct: 83 DLFGFLSLPISFAPFESLIFTSIIVPQASFLGHLSGIVVGYAIAWG----LIHGMNNFWA 138
Query: 225 IESSSLLSTCIRQPKFILCTGGNPSGYIPTYSGQNTSSSGLFSGNIWSNLSSWMPQRETS 284
I S+L G+I +S + SG + + + E+
Sbjct: 139 I---SML------------------GWIVLFSVVSLKRSGAYDFD--------FIEIESV 169
Query: 285 SQPTQDS-RFPGRGRTLSSSQSPVH 308
P+ S RFPG GR L S PV
Sbjct: 170 MDPSLPSVRFPGTGRALQMSALPVE 194
>gi|253690291|ref|YP_003019481.1| Rhomboid protease [Pectobacterium carotovorum subsp. carotovorum
PC1]
gi|251756869|gb|ACT14945.1| Rhomboid protease [Pectobacterium carotovorum subsp. carotovorum
PC1]
Length = 277
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
T +V++V ++++ + GY+S P A + Q++R+++ + H SLLH+LFN+
Sbjct: 98 LTLSVMVVTIAVFILMQISGYESVMTWLAFP-AEGQQLQLWRWFSHALLHFSLLHILFNL 156
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
+ LG +E+++G+ ++ IT++ A
Sbjct: 157 MWWWYLGGPVEKVLGTGKLLVITLVSA 183
>gi|432854823|ref|ZP_20083094.1| rhomboid protease glpG [Escherichia coli KTE144]
gi|431397905|gb|ELG81337.1| rhomboid protease glpG [Escherichia coli KTE144]
Length = 276
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T ++I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 97 TWVMMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLL 156
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ ALL ++ Q G S
Sbjct: 157 WWWNLGGAVEKRLGSGKLIVIT-----------LISALLSGYVQ----QKFSGPWFGGLS 201
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 202 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFD-----LFGMSMANGA--- 253
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 254 HIAGLAVGLAMAF 266
>gi|329938622|ref|ZP_08288018.1| integral membrane protein [Streptomyces griseoaurantiacus M045]
gi|329302113|gb|EGG46005.1| integral membrane protein [Streptomyces griseoaurantiacus M045]
Length = 303
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 73/165 (44%), Gaps = 27/165 (16%)
Query: 53 FLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLAT 112
F P ++ Q YR T++ HG H++FNML+L LG+ LE+ +G R + ++
Sbjct: 129 FSPLEGVAEGQYYRLLTAMFLHGGYAHIIFNMLSLWWLGAPLEKALGRARFLALYLVSGL 188
Query: 113 SNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNI 172
+ + L L+A ++ ++G SG IF L L + +
Sbjct: 189 AGSALSYLLA-------------AANQPSLGASGAIFGLFGATAVL----------VRRL 225
Query: 173 PAKWYPLILLVLFQVLMT----NVSLLGHLCGILSGFAYTYGFFN 213
P+I L++ +++T ++ H+ G+++G Y +
Sbjct: 226 NYDMRPVIALLVINLVLTFGWSGIAWEAHIGGLVAGVMIGYAMVH 270
>gi|420587424|ref|ZP_15081250.1| rhomboid protease glpG [Yersinia pestis PY-09]
gi|420711231|ref|ZP_15191691.1| rhomboid protease glpG [Yersinia pestis PY-56]
gi|420754611|ref|ZP_15229959.1| rhomboid protease glpG [Yersinia pestis PY-66]
gi|391469083|gb|EIR26901.1| rhomboid protease glpG [Yersinia pestis PY-09]
gi|391593395|gb|EIS37706.1| rhomboid protease glpG [Yersinia pestis PY-56]
gi|391649926|gb|EIS87266.1| rhomboid protease glpG [Yersinia pestis PY-66]
Length = 275
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 49/88 (55%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
T +V+++C IY++ L+ G + P Q++R+ + H SLLH+LFN+
Sbjct: 94 LTLSVMVLCIAIYILMLITGDMAVMSWLAWPYNSSQYLQIWRWVSHAFLHFSLLHILFNL 153
Query: 85 LALVPLGSELERIMGSVRMFYITILLAT 112
+ LG ++E+ +G+ ++ +TI+ A
Sbjct: 154 MWWWYLGGQMEKRLGTSKLLVLTIVSAV 181
>gi|386812611|ref|ZP_10099836.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386404881|dbj|GAB62717.1| conserved hypothetical protein [planctomycete KSU-1]
Length = 291
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 82/172 (47%), Gaps = 23/172 (13%)
Query: 44 GYDSFYEICFL-PSAVISRFQVYRFYTSIVFHGSL--LHVLFNMLALVPLGSELERIMGS 100
+D+F ++ +L P + +++F+T + H + H++FNML L GSE+ER++GS
Sbjct: 67 AFDTFTKLFWLYPPDALGHGWLWQFFTYMFLHSTANPWHLIFNMLVLWMFGSEVERVLGS 126
Query: 101 VRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSG 160
R + I + + P+ + +G SG IF+ I I ++
Sbjct: 127 RRFLTLYFTAGIFAGICNCIFT------PWASM--------VGASGAIFA-IEIAFAMYF 171
Query: 161 AQSRSVFGLFNIPAKWYPLIL--LVLFQVLM---TNVSLLGHLCGILSGFAY 207
S +F F I AK+ +I + +F ++ N++ HL G++ GF +
Sbjct: 172 PNSTVIFYFFPIKAKYLVMIFTSITIFNCILPRNNNIAHFAHLGGLVYGFLF 223
>gi|51598068|ref|YP_072259.1| intramembrane serine protease GlpG [Yersinia pseudotuberculosis IP
32953]
gi|81638194|sp|Q664J1.1|GLPG_YERPS RecName: Full=Rhomboid protease GlpG; AltName: Full=Intramembrane
serine protease
gi|51591350|emb|CAH23016.1| probable membrane protein [Yersinia pseudotuberculosis IP 32953]
Length = 278
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 49/88 (55%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
T +V+++C IY++ L+ G + P Q++R+ + H SLLH+LFN+
Sbjct: 97 LTLSVMVLCIAIYILMLITGDMAVMSWLAWPYNSSQYLQIWRWVSHAFLHFSLLHILFNL 156
Query: 85 LALVPLGSELERIMGSVRMFYITILLAT 112
+ LG ++E+ +G+ ++ +TI+ A
Sbjct: 157 MWWWYLGGQMEKRLGTSKLLVLTIVSAV 184
>gi|420032461|ref|ZP_14546275.1| intramembrane serine protease GlpG, partial [Klebsiella pneumoniae
subsp. pneumoniae KPNIH12]
gi|397397437|gb|EJJ89112.1| intramembrane serine protease GlpG, partial [Klebsiella pneumoniae
subsp. pneumoniae KPNIH12]
Length = 222
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 49/87 (56%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
FT A++++C ++++ L G P +F+ +R+++ H SL+H+LFN+
Sbjct: 96 FTWAILLICIAVFILQNLLGDQPVMIWLAWPYDPSLQFEAWRYFSHAFMHFSLMHILFNL 155
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
L LG +E+ +GS ++ IT++ A
Sbjct: 156 LWWWYLGGAVEKRIGSGKLVVITVISA 182
>gi|307107576|gb|EFN55818.1| hypothetical protein CHLNCDRAFT_145331 [Chlorella variabilis]
Length = 361
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 70/159 (44%), Gaps = 7/159 (4%)
Query: 58 VISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAIL 117
V+ + R T ++ H + H++ N ++V G LER +GS + + ++ L
Sbjct: 126 VLHHGEYRRLLTGVMLHADMTHLVSNCTSVVLEGLPLERRLGSPAFLALVASTSLTSQGL 185
Query: 118 HLL-IALLVAHIPFYRLQN-VMDECAIGFSGVIFSLIVI-----ETSLSGAQSRSVFGLF 170
+LL L V +P L N +GFSG+ +L V+ E L+ AQ
Sbjct: 186 YLLSTRLAVRFLPNSSLANDYYLSFVVGFSGIALALRVVGGYMREADLAAAQVAPSEEFV 245
Query: 171 NIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTY 209
+ L++ L N SL GHLCGI +G + Y
Sbjct: 246 LTAGRLAAWPSLLMSHALFPNASLTGHLCGIATGVLHVY 284
>gi|119472796|ref|XP_001258417.1| rhomboid family protein, putative [Neosartorya fischeri NRRL 181]
gi|119406569|gb|EAW16520.1| rhomboid family protein, putative [Neosartorya fischeri NRRL 181]
Length = 272
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 94/232 (40%), Gaps = 16/232 (6%)
Query: 13 TRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIV 72
TR + +P FT V++V +L+ L + P+ I +YR T
Sbjct: 15 TRVRSYVLRLPLFTRLVLLVILAFWLLELQTIWSVVQWGSLTPNE-IGIGSMYRLNTYPF 73
Query: 73 FHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITI-LLATSNAILHLLIALLVAHIPFY 131
H H N+LAL PL E G++ + I L+T A +++LI + H
Sbjct: 74 IHVGFFHAFVNLLALTPLLERFEAEHGTLTAVALFIGPLSTFPAGIYILIEKFILH---- 129
Query: 132 RLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVF--GLFNIPAKWYPLILLVLFQVLM 189
+ +G S +F L+ E ++ +S F G IP PL L + +
Sbjct: 130 -----SNTAVVGASVWVFLLLGSE-AIKTFKSNPYFSLGTTKIPTWTSPLFACALVSIFV 183
Query: 190 TNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFI 241
N S LGHL I+ G+ G+ + +P IE L+ R P ++
Sbjct: 184 PNTSFLGHLSAIIIGYLLGLGYLKVFVPPEKILRWIEGK--LNLLGRLPHYV 233
>gi|22127769|ref|NP_671192.1| intramembrane serine protease GlpG [Yersinia pestis KIM10+]
gi|45439986|ref|NP_991525.1| intramembrane serine protease GlpG [Yersinia pestis biovar Microtus
str. 91001]
gi|108809339|ref|YP_653255.1| intramembrane serine protease GlpG [Yersinia pestis Antiqua]
gi|108814107|ref|YP_649874.1| intramembrane serine protease GlpG [Yersinia pestis Nepal516]
gi|145597372|ref|YP_001161447.1| intramembrane serine protease GlpG [Yersinia pestis Pestoides F]
gi|150260805|ref|ZP_01917533.1| probable membrane protein [Yersinia pestis CA88-4125]
gi|153949370|ref|YP_001402944.1| intramembrane serine protease GlpG [Yersinia pseudotuberculosis IP
31758]
gi|167469444|ref|ZP_02334148.1| peptidase, S54 (rhomboid) family protein [Yersinia pestis FV-1]
gi|170022419|ref|YP_001718924.1| intramembrane serine protease GlpG [Yersinia pseudotuberculosis
YPIII]
gi|186897268|ref|YP_001874380.1| intramembrane serine protease GlpG [Yersinia pseudotuberculosis
PB1/+]
gi|218927334|ref|YP_002345209.1| intramembrane serine protease GlpG [Yersinia pestis CO92]
gi|229836400|ref|ZP_04456567.1| predicted intramembrane serine protease [Yersinia pestis Pestoides
A]
gi|229839975|ref|ZP_04460134.1| predicted intramembrane serine protease [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229842057|ref|ZP_04462212.1| predicted intramembrane serine protease [Yersinia pestis biovar
Orientalis str. India 195]
gi|229904646|ref|ZP_04519757.1| predicted intramembrane serine protease [Yersinia pestis Nepal516]
gi|384137897|ref|YP_005520599.1| intramembrane serine protease GlpG [Yersinia pestis A1122]
gi|384412753|ref|YP_005622115.1| intramembrane serine protease GlpG [Yersinia pestis biovar
Medievalis str. Harbin 35]
gi|420544531|ref|ZP_15042746.1| rhomboid protease glpG [Yersinia pestis PY-01]
gi|420549835|ref|ZP_15047489.1| rhomboid protease glpG [Yersinia pestis PY-02]
gi|420555287|ref|ZP_15052342.1| rhomboid protease glpG [Yersinia pestis PY-03]
gi|420560940|ref|ZP_15057258.1| rhomboid protease glpG [Yersinia pestis PY-04]
gi|420565972|ref|ZP_15061794.1| rhomboid protease glpG [Yersinia pestis PY-05]
gi|420571617|ref|ZP_15066923.1| rhomboid protease glpG [Yersinia pestis PY-06]
gi|420592749|ref|ZP_15086041.1| rhomboid protease glpG [Yersinia pestis PY-10]
gi|420598419|ref|ZP_15091122.1| rhomboid protease glpG [Yersinia pestis PY-11]
gi|420603965|ref|ZP_15096059.1| rhomboid protease glpG [Yersinia pestis PY-12]
gi|420609295|ref|ZP_15100904.1| rhomboid protease glpG [Yersinia pestis PY-13]
gi|420619994|ref|ZP_15110333.1| rhomboid protease glpG [Yersinia pestis PY-15]
gi|420630206|ref|ZP_15119596.1| rhomboid protease glpG [Yersinia pestis PY-19]
gi|420640957|ref|ZP_15129246.1| rhomboid protease glpG [Yersinia pestis PY-29]
gi|420646091|ref|ZP_15133962.1| rhomboid protease glpG [Yersinia pestis PY-32]
gi|420651758|ref|ZP_15139036.1| rhomboid protease glpG [Yersinia pestis PY-34]
gi|420662517|ref|ZP_15148693.1| rhomboid protease glpG [Yersinia pestis PY-42]
gi|420672829|ref|ZP_15158041.1| rhomboid protease glpG [Yersinia pestis PY-46]
gi|420683555|ref|ZP_15167747.1| rhomboid protease glpG [Yersinia pestis PY-48]
gi|420688715|ref|ZP_15172334.1| rhomboid protease glpG [Yersinia pestis PY-52]
gi|420699765|ref|ZP_15182017.1| rhomboid family protein [Yersinia pestis PY-54]
gi|420705967|ref|ZP_15186909.1| rhomboid protease glpG [Yersinia pestis PY-55]
gi|420716593|ref|ZP_15196451.1| rhomboid protease glpG [Yersinia pestis PY-58]
gi|420722249|ref|ZP_15201259.1| rhomboid protease glpG [Yersinia pestis PY-59]
gi|420727897|ref|ZP_15206276.1| rhomboid protease glpG [Yersinia pestis PY-60]
gi|420732996|ref|ZP_15210867.1| rhomboid protease glpG [Yersinia pestis PY-61]
gi|420738458|ref|ZP_15215805.1| rhomboid protease glpG [Yersinia pestis PY-63]
gi|420743696|ref|ZP_15220499.1| rhomboid protease glpG [Yersinia pestis PY-64]
gi|420765914|ref|ZP_15239494.1| rhomboid protease glpG [Yersinia pestis PY-72]
gi|420770952|ref|ZP_15243999.1| rhomboid protease glpG [Yersinia pestis PY-76]
gi|420787207|ref|ZP_15258391.1| rhomboid family protein [Yersinia pestis PY-90]
gi|420803177|ref|ZP_15272760.1| rhomboid protease glpG [Yersinia pestis PY-93]
gi|420808356|ref|ZP_15277454.1| rhomboid family protein [Yersinia pestis PY-94]
gi|420814153|ref|ZP_15282632.1| rhomboid protease glpG [Yersinia pestis PY-95]
gi|420824375|ref|ZP_15291841.1| rhomboid protease glpG [Yersinia pestis PY-98]
gi|420835005|ref|ZP_15301433.1| rhomboid protease glpG [Yersinia pestis PY-100]
gi|420845743|ref|ZP_15311161.1| rhomboid protease glpG [Yersinia pestis PY-102]
gi|421761546|ref|ZP_16198346.1| intramembrane serine protease GlpG [Yersinia pestis INS]
gi|122382682|sp|Q1C2L2.1|GLPG_YERPA RecName: Full=Rhomboid protease GlpG; AltName: Full=Intramembrane
serine protease
gi|122383983|sp|Q1CCK6.1|GLPG_YERPN RecName: Full=Rhomboid protease GlpG; AltName: Full=Intramembrane
serine protease
gi|123777832|sp|Q7CFX8.1|GLPG_YERPE RecName: Full=Rhomboid protease GlpG; AltName: Full=Intramembrane
serine protease
gi|171769161|sp|A7FNW6.1|GLPG_YERP3 RecName: Full=Rhomboid protease GlpG; AltName: Full=Intramembrane
serine protease
gi|172044476|sp|A4TGR2.1|GLPG_YERPP RecName: Full=Rhomboid protease GlpG; AltName: Full=Intramembrane
serine protease
gi|226729488|sp|B1JHY8.1|GLPG_YERPY RecName: Full=Rhomboid protease GlpG; AltName: Full=Intramembrane
serine protease
gi|226729489|sp|B2K5W4.1|GLPG_YERPB RecName: Full=Rhomboid protease GlpG; AltName: Full=Intramembrane
serine protease
gi|21960896|gb|AAM87443.1|AE013994_8 protein of glp regulon [Yersinia pestis KIM10+]
gi|45434841|gb|AAS60402.1| probable membrane protein [Yersinia pestis biovar Microtus str.
91001]
gi|108777755|gb|ABG20274.1| membrane protein [Yersinia pestis Nepal516]
gi|108781252|gb|ABG15310.1| membrane protein [Yersinia pestis Antiqua]
gi|115345945|emb|CAL18808.1| probable membrane protein [Yersinia pestis CO92]
gi|145209068|gb|ABP38475.1| membrane protein [Yersinia pestis Pestoides F]
gi|149290213|gb|EDM40290.1| probable membrane protein [Yersinia pestis CA88-4125]
gi|152960865|gb|ABS48326.1| peptidase, S54 (rhomboid) family protein [Yersinia
pseudotuberculosis IP 31758]
gi|169748953|gb|ACA66471.1| Rhomboid family protein [Yersinia pseudotuberculosis YPIII]
gi|186700294|gb|ACC90923.1| Rhomboid family protein [Yersinia pseudotuberculosis PB1/+]
gi|229678764|gb|EEO74869.1| predicted intramembrane serine protease [Yersinia pestis Nepal516]
gi|229690367|gb|EEO82421.1| predicted intramembrane serine protease [Yersinia pestis biovar
Orientalis str. India 195]
gi|229696341|gb|EEO86388.1| predicted intramembrane serine protease [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229706468|gb|EEO92475.1| predicted intramembrane serine protease [Yersinia pestis Pestoides
A]
gi|320013257|gb|ADV96828.1| intramembrane serine protease GlpG [Yersinia pestis biovar
Medievalis str. Harbin 35]
gi|342853026|gb|AEL71579.1| intramembrane serine protease GlpG [Yersinia pestis A1122]
gi|391433417|gb|EIQ94752.1| rhomboid protease glpG [Yersinia pestis PY-01]
gi|391434197|gb|EIQ95418.1| rhomboid protease glpG [Yersinia pestis PY-02]
gi|391437161|gb|EIQ98052.1| rhomboid protease glpG [Yersinia pestis PY-03]
gi|391449452|gb|EIR09177.1| rhomboid protease glpG [Yersinia pestis PY-04]
gi|391449963|gb|EIR09642.1| rhomboid protease glpG [Yersinia pestis PY-05]
gi|391452053|gb|EIR11504.1| rhomboid protease glpG [Yersinia pestis PY-06]
gi|391482855|gb|EIR39271.1| rhomboid protease glpG [Yersinia pestis PY-10]
gi|391483292|gb|EIR39665.1| rhomboid protease glpG [Yersinia pestis PY-12]
gi|391483805|gb|EIR40138.1| rhomboid protease glpG [Yersinia pestis PY-11]
gi|391497657|gb|EIR52497.1| rhomboid protease glpG [Yersinia pestis PY-13]
gi|391498582|gb|EIR53338.1| rhomboid protease glpG [Yersinia pestis PY-15]
gi|391514755|gb|EIR67834.1| rhomboid protease glpG [Yersinia pestis PY-19]
gi|391528784|gb|EIR80572.1| rhomboid protease glpG [Yersinia pestis PY-29]
gi|391531718|gb|EIR83191.1| rhomboid protease glpG [Yersinia pestis PY-34]
gi|391532963|gb|EIR84299.1| rhomboid protease glpG [Yersinia pestis PY-32]
gi|391547656|gb|EIR97534.1| rhomboid protease glpG [Yersinia pestis PY-42]
gi|391561897|gb|EIS10379.1| rhomboid protease glpG [Yersinia pestis PY-46]
gi|391565195|gb|EIS13333.1| rhomboid protease glpG [Yersinia pestis PY-48]
gi|391577351|gb|EIS23796.1| rhomboid protease glpG [Yersinia pestis PY-52]
gi|391589239|gb|EIS34160.1| rhomboid protease glpG [Yersinia pestis PY-55]
gi|391592982|gb|EIS37343.1| rhomboid family protein [Yersinia pestis PY-54]
gi|391606225|gb|EIS48984.1| rhomboid protease glpG [Yersinia pestis PY-60]
gi|391608238|gb|EIS50751.1| rhomboid protease glpG [Yersinia pestis PY-58]
gi|391608881|gb|EIS51331.1| rhomboid protease glpG [Yersinia pestis PY-59]
gi|391620901|gb|EIS62013.1| rhomboid protease glpG [Yersinia pestis PY-61]
gi|391621838|gb|EIS62839.1| rhomboid protease glpG [Yersinia pestis PY-63]
gi|391630168|gb|EIS69976.1| rhomboid protease glpG [Yersinia pestis PY-64]
gi|391646295|gb|EIS84062.1| rhomboid protease glpG [Yersinia pestis PY-72]
gi|391656157|gb|EIS92825.1| rhomboid protease glpG [Yersinia pestis PY-76]
gi|391669800|gb|EIT04905.1| rhomboid family protein [Yersinia pestis PY-90]
gi|391687360|gb|EIT20685.1| rhomboid protease glpG [Yersinia pestis PY-93]
gi|391690241|gb|EIT23287.1| rhomboid family protein [Yersinia pestis PY-94]
gi|391701457|gb|EIT33461.1| rhomboid protease glpG [Yersinia pestis PY-95]
gi|391705204|gb|EIT36792.1| rhomboid protease glpG [Yersinia pestis PY-98]
gi|391720895|gb|EIT50886.1| rhomboid protease glpG [Yersinia pestis PY-100]
gi|391731826|gb|EIT60476.1| rhomboid protease glpG [Yersinia pestis PY-102]
gi|411177868|gb|EKS47880.1| intramembrane serine protease GlpG [Yersinia pestis INS]
Length = 278
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 49/88 (55%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
T +V+++C IY++ L+ G + P Q++R+ + H SLLH+LFN+
Sbjct: 97 LTLSVMVLCIAIYILMLITGDMAVMSWLAWPYNSSQYLQIWRWVSHAFLHFSLLHILFNL 156
Query: 85 LALVPLGSELERIMGSVRMFYITILLAT 112
+ LG ++E+ +G+ ++ +TI+ A
Sbjct: 157 MWWWYLGGQMEKRLGTSKLLVLTIVSAV 184
>gi|387780641|ref|YP_005755439.1| hypothetical protein SARLGA251_14550 [Staphylococcus aureus subsp.
aureus LGA251]
gi|344177743|emb|CCC88222.1| putative membrane protein [Staphylococcus aureus subsp. aureus
LGA251]
Length = 487
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 27/187 (14%)
Query: 30 VIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSLLHVLFNM 84
+I + +C++ ++F ++ L + F V YR TS+ H S H+L NM
Sbjct: 163 IIFVNVLIWLCMILYLNNFSDVKLLDVGGLVHFNVVHGEWYRIVTSMFLHFSFEHILMNM 222
Query: 85 LALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGF 144
L+L G +E I+GS RM + IA L + F L ++G
Sbjct: 223 LSLFIFGKIVEAIIGSWRMLTV------------YFIAGLFGN--FVSLSFNTTTISVGA 268
Query: 145 SGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGI 201
SG IF L I +S ++ + G I L++LV + M+N++++ H+ G
Sbjct: 269 SGAIFGLIGSIFAMMYVSKTFNKKMLGQLLI-----ALVILVGVSLFMSNINIVAHIGGF 323
Query: 202 LSGFAYT 208
+ G T
Sbjct: 324 IGGLLIT 330
>gi|23098073|ref|NP_691539.1| hypothetical protein OB0618 [Oceanobacillus iheyensis HTE831]
gi|22776298|dbj|BAC12574.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 258
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 77/164 (46%), Gaps = 24/164 (14%)
Query: 49 YEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITI 108
Y I F +A I Q +R T I HG L+H+LFN +LV G LE+++G R +I
Sbjct: 47 YGIGF--NAAIEAGQWWRLITPIFLHGGLMHMLFNSFSLVLFGPALEQMLG--RFKFILA 102
Query: 109 LLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFG 168
L T+ + A+I + LQ M +G SG IF L I + + +
Sbjct: 103 YLGTA----------ITANIAIFFLQP-MSYAHLGASGAIFGLFGIYVFMVMYRKDLI-- 149
Query: 169 LFNIPAKWYPLILLVLFQVLMT----NVSLLGHLCGILSGFAYT 208
+ + ++V ++MT N+S+LGHL G LSG Y
Sbjct: 150 ---DQSSSQMIAVIVGIGLVMTFIRPNISILGHLFGFLSGIIYA 190
>gi|194335065|ref|YP_002016925.1| rhomboid family protein [Prosthecochloris aestuarii DSM 271]
gi|194312883|gb|ACF47278.1| Rhomboid family protein [Prosthecochloris aestuarii DSM 271]
Length = 283
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 80/179 (44%), Gaps = 27/179 (15%)
Query: 60 SRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHL 119
+ FQ+++ T + HG L H+LFNM AL G+E+E G+ + A+++L
Sbjct: 59 NSFQIWQLVTYMFMHGGLAHILFNMFALWLFGAEIENYWGTKEFTAYYFVCGIGAALINL 118
Query: 120 LIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPL 179
+ + +G SG +F +++ + + ++ LF I AK++ +
Sbjct: 119 ATTIGSPY------------PTVGASGAVFGILLAFGMMFPDRYIFLYFLFPIKAKYF-V 165
Query: 180 ILLVLFQVLM----------TNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESS 228
++LM +N++ H+ G+++GFAY + G SF IE +
Sbjct: 166 AGYAAIELLMGINNSTMGSGSNIAHFAHIGGMVAGFAYI----KIRQQGWSFSDWIEKT 220
>gi|411011379|ref|ZP_11387708.1| GlpG protein [Aeromonas aquariorum AAK1]
gi|423198992|ref|ZP_17185575.1| hypothetical protein HMPREF1171_03607 [Aeromonas hydrophila SSU]
gi|404629651|gb|EKB26394.1| hypothetical protein HMPREF1171_03607 [Aeromonas hydrophila SSU]
Length = 277
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 89/185 (48%), Gaps = 22/185 (11%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPS-AVISRFQVYRFYTSIVFHGSLLHVLFN 83
T V+I C IY + + G F E+ F P+ A + +Q +R++T H S+LH++FN
Sbjct: 99 LTLVVIIACLAIYGLDAI-GLPIFDELAFHPTLAQFTDWQAWRYFTPAFIHFSVLHLVFN 157
Query: 84 MLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIG 143
+L LG ++E+ +GS ++ ILL A+ +L A A P + G
Sbjct: 158 LLWWWYLGGQIEQRLGSGKLL---ILLLVGAALPNL--AEFFASGPLFG----------G 202
Query: 144 FSGVIFSLIVIETSLSGAQSRSVFGLFNIPA-KWYPLILLVL--FQVLMTNVSLLGHLCG 200
SGV+++L+ S Q GL PA + L L L F +L T + + HL G
Sbjct: 203 LSGVVYALLGYCWLRSKLQPAC--GLTLPPALMGFMLFWLALGFFDLLGTRTANMAHLAG 260
Query: 201 ILSGF 205
+L G
Sbjct: 261 LLVGL 265
>gi|301122517|ref|XP_002908985.1| serine protease family S54, putative [Phytophthora infestans T30-4]
gi|262099747|gb|EEY57799.1| serine protease family S54, putative [Phytophthora infestans T30-4]
Length = 298
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 85/185 (45%), Gaps = 34/185 (18%)
Query: 35 TIYLICLLFGYD----------SFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
T+ L+ L++G S Y +C P V+S + + R S + H H+ NM
Sbjct: 43 TLGLMALMYGLHFQKEQSPELFSPYSLC--PDRVLSHWDLTRIVASGLIHVDDWHLYHNM 100
Query: 85 LALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGF 144
++ + G LE MGSVR + L +L +++AL++A
Sbjct: 101 VSFLWKGCNLEYKMGSVRFLLTVVYLLVLCHVLVVVVALVLA------------------ 142
Query: 145 SGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSG 204
F + V+ S A S SV+G F +P K+ + LV+ L+ S +GH+CGIL+G
Sbjct: 143 --TGFQMPVLLNHNSPAFS-SVYG-FQVPTKYAAWLELVVIHFLVPRSSFIGHMCGILAG 198
Query: 205 FAYTY 209
+ + Y
Sbjct: 199 YLFVY 203
>gi|189091878|ref|XP_001929772.1| hypothetical protein [Podospora anserina S mat+]
gi|188219292|emb|CAP49272.1| unnamed protein product [Podospora anserina S mat+]
Length = 268
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 98/242 (40%), Gaps = 14/242 (5%)
Query: 1 MRPNIVSEAGLSTRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVIS 60
M PNI + +TRA + +P FT V+I +L L D +P +
Sbjct: 1 MPPNITALN--TTRARTYVFRLPLFTRVVIIAIVGFWLAGLQSIVDIQQWGALIPDE-MG 57
Query: 61 RFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLL 120
+YR T H ++ H + N+LAL PL E G++ LA L +
Sbjct: 58 LATLYRMNTFPFIHLNIFHAVMNILALTPLMERFEAEYGTLN------CLALFFGPLTTI 111
Query: 121 IALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLS-GAQSRSVFGLFNIPAKWYPL 179
A L + + N + +G S +F L+ +E + V G ++IP P+
Sbjct: 112 PAFLYIGLEKFVFGN--NVAVMGASMWVFLLLGVEAVKTYKVNPNFVIGTYSIPTWTTPI 169
Query: 180 ILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPK 239
+L VL+ + S GH G++ G+ G+ L P IE L+ R P
Sbjct: 170 GVLFAMAVLVPSSSFWGHAAGLVIGYGAGLGYVKFLAPPEKILRWIEGK--LNLLGRLPH 227
Query: 240 FI 241
++
Sbjct: 228 YV 229
>gi|404417227|ref|ZP_10999031.1| hypothetical protein SARL_05123 [Staphylococcus arlettae CVD059]
gi|403490425|gb|EJY95966.1| hypothetical protein SARL_05123 [Staphylococcus arlettae CVD059]
Length = 480
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 81/180 (45%), Gaps = 34/180 (18%)
Query: 36 IYLICLLFGYDSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSLLHVLFNMLALVPL 90
I+L+ +LF ++ F E+ L + F V YR +SI H + H+L NML+L
Sbjct: 170 IWLLMILF-FNRFSELKLLDVGGLVHFNVVHGEWYRLISSIFLHYNFEHILMNMLSLFIF 228
Query: 91 GSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFS 150
G +E I+G RM I L + L A+ F L +D ++G SG IF
Sbjct: 229 GKIVESIVGHWRMLVI------------FLFSGLFAN--FASLSFNIDTISVGASGAIFG 274
Query: 151 LIVIETSLSGAQ------SRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSG 204
LI SL G R + G I L++L+ + M N+++ H+ G + G
Sbjct: 275 LI---GSLFGFMYISKIFERKLVGQLLI-----ALVILIGISLFMDNINVWAHIGGFIGG 326
>gi|213423630|ref|ZP_03356610.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Typhi str. E01-6750]
Length = 162
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 32/164 (19%)
Query: 55 PSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSN 114
P + +F+V+R++T I H SL+H+LFN+L LG +E+ +GS ++ IT++ A +
Sbjct: 12 PFDPVLKFEVWRYFTHIFMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITVISALLS 71
Query: 115 AILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVI---------ETSLSGAQSRS 165
Y Q G SGV+++L+ ++ + +
Sbjct: 72 G---------------YVQQKFSGPWFGGLSGVVYALMGYVWLRGERDPQSGIYLQRGLI 116
Query: 166 VFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTY 209
+F L I A W+ F + M N + H+ G++ G A +
Sbjct: 117 IFALLWIVAGWFD-----WFGMSMANGA---HIAGLIVGLAMAF 152
>gi|117618367|ref|YP_854633.1| GlpG protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
gi|117559774|gb|ABK36722.1| GlpG protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
Length = 277
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 89/185 (48%), Gaps = 22/185 (11%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPS-AVISRFQVYRFYTSIVFHGSLLHVLFN 83
T V+I C IY + + G F E+ F P+ A + +Q +R++T H S+LH++FN
Sbjct: 99 LTLVVIIACLAIYGLDAI-GLPIFDELAFHPTLAQFTDWQAWRYFTPAFIHFSVLHLVFN 157
Query: 84 MLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIG 143
+L LG ++E+ +GS ++ ILL A+ +L A A P + G
Sbjct: 158 LLWWWYLGGQIEQRLGSGKLL---ILLLVGAALPNL--AEFFASGPLFG----------G 202
Query: 144 FSGVIFSLIVIETSLSGAQSRSVFGLFNIPA-KWYPLILLVL--FQVLMTNVSLLGHLCG 200
SGV+++L+ S Q GL PA + L L L F +L T + + HL G
Sbjct: 203 LSGVVYALLGYCWLRSKLQPAC--GLTLPPALMGFMLFWLALGFFDLLGTRTANMAHLAG 260
Query: 201 ILSGF 205
+L G
Sbjct: 261 LLVGL 265
>gi|431917916|gb|ELK17145.1| Rhomboid domain-containing protein 1 [Pteropus alecto]
Length = 189
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 54/113 (47%), Gaps = 9/113 (7%)
Query: 66 RFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLV 125
R S H H+ FNM++L+ G LER +GS Y+ + +++L + L
Sbjct: 67 RLLLSPFHHADDWHLYFNMVSLLWKGINLERRLGSKWFAYVIATFSLLTGVVYLFLELAF 126
Query: 126 AHI---PFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAK 175
A P +R+ CA+GFSGV+F+L V+ SV G F +P K
Sbjct: 127 AEFMDEPSFRMN-----CAVGFSGVLFALKVLNNHYFPGGFVSVMG-FPVPNK 173
>gi|409124087|ref|ZP_11223482.1| rhomboid family protein [Gillisia sp. CBA3202]
Length = 247
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T ++I+ I+ + +F D Y++ L F V++ T + HG +H+LFNM
Sbjct: 7 TVKILIIINAIFFVGTMFVGDYTYKLFSLWFFQNENFGVWQIVTHMFMHGGFMHILFNMY 66
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLI 121
AL GS +E+++G + + AI+H L+
Sbjct: 67 ALWAFGSPIEQMLGKNKFIFFYFSCGIGAAIIHSLV 102
>gi|426254725|ref|XP_004021027.1| PREDICTED: rhomboid domain-containing protein 2 [Ovis aries]
Length = 364
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 7/158 (4%)
Query: 54 LPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATS 113
L S + +QVYR T I + + + +L + + ER +G+VR + T++ A
Sbjct: 50 LRSEALHNWQVYRLVTYIFVYENPVSLLCGAIVIWRFAGNFERTVGTVRHCFFTLVFAVI 109
Query: 114 NAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIP 173
AI+ L + + +L V D A GF+ V F+++ + S + VFG+ +P
Sbjct: 110 CAIIFLSFEAVSS---LSKLGEVED--ARGFTPVAFAMLGVSCVRSRMRRALVFGMV-VP 163
Query: 174 AKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGF 211
+ P +LL L+ S L ++CG+ G AY + +
Sbjct: 164 SLVVPWLLLCA-SWLIPQTSFLSNVCGLGIGLAYGFTY 200
>gi|410620726|ref|ZP_11331584.1| GlpG protein [Glaciecola pallidula DSM 14239 = ACAM 615]
gi|410159609|dbj|GAC26958.1| GlpG protein [Glaciecola pallidula DSM 14239 = ACAM 615]
Length = 322
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 90/189 (47%), Gaps = 21/189 (11%)
Query: 20 ESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPS--AVISRFQVYRFYTSIVFHGSL 77
+S PF S V+ +C ++L+ L + Y+ + S ++ Q +R +T H
Sbjct: 133 KSTPFM-SLVLAICLGVFLLSYLGASNVIYQSLTIRSIDELLQSQQWWRLFTPAFLHFGA 191
Query: 78 LHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVM 137
+H++FN++ LGS+LER GSV + I + A S+ + LL++ P +
Sbjct: 192 IHIIFNLIWWWLLGSQLERAFGSVSLAVIFAIAAISSNVAQLLVS-----GPNFG----- 241
Query: 138 DECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVL--FQVLMTNVSLL 195
G SGV+++L + + + GL N ++ L L L F VL N++
Sbjct: 242 -----GLSGVVYALFGYVWWIGLLRPQWGMGLPN-NLVYFLLGWLALGYFDVLWVNMANE 295
Query: 196 GHLCGILSG 204
HL G++SG
Sbjct: 296 AHLFGLISG 304
>gi|418920630|ref|ZP_13474562.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIGC348]
gi|377764356|gb|EHT88209.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIGC348]
Length = 370
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 27/187 (14%)
Query: 30 VIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSLLHVLFNM 84
+I + +C++ ++F ++ L + F V YR TS+ H S H+L NM
Sbjct: 46 IIFVNVLIWLCMILYLNNFSDVKLLDVGGLVHFNVVHGEWYRIVTSMFLHFSFEHILMNM 105
Query: 85 LALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGF 144
L+L G +E I+GS RM + IA L + F L ++G
Sbjct: 106 LSLFIFGKIVEAIIGSWRMLTV------------YFIAGLFGN--FVSLSFNTTTISVGA 151
Query: 145 SGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGI 201
SG IF L I +S ++ + G I L++LV + M+N++++ H+ G
Sbjct: 152 SGAIFGLIGSIFAMMYVSKTFNKKMLGQLLI-----ALVILVGVSLFMSNINIVAHIGGF 206
Query: 202 LSGFAYT 208
+ G T
Sbjct: 207 IGGLLIT 213
>gi|116668581|ref|YP_829514.1| rhomboid family protein [Arthrobacter sp. FB24]
gi|116608690|gb|ABK01414.1| Rhomboid family protein [Arthrobacter sp. FB24]
Length = 293
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 84/191 (43%), Gaps = 25/191 (13%)
Query: 23 PFFTSAVVIVCGTIYLICLLFGYDSFYE----ICFLPSAVISRFQVYRFYTSIVFH--GS 76
P T ++ VC +Y++ + D Y+ + F+ +R TS H G
Sbjct: 77 PLVTFGIIAVCALVYVLQWIVPNDGIYQNFAFATVYATPEYGVFEPWRMLTSAFLHSQGF 136
Query: 77 LLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNV 136
+LH++ NM L G LE ++G +R + +L A ++ +LL L ++ P +L V
Sbjct: 137 ILHIVLNMYMLWMFGQALEPLLGRIRFLALYLLAAVGGSVGYLL--LTPSYTPGQQLAGV 194
Query: 137 MDECAIGFSGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVS 193
+G SG IF L +++ G ++ ++ L I + ++ ++
Sbjct: 195 -----VGASGAIFGLFGAMLVVQRHRGGDTKQLWVLIAING---------VIGFIVPQIA 240
Query: 194 LLGHLCGILSG 204
HL G+++G
Sbjct: 241 WQAHLGGLVTG 251
>gi|381403121|ref|ZP_09927805.1| intramembrane serine protease GlpG [Pantoea sp. Sc1]
gi|380736320|gb|EIB97383.1| intramembrane serine protease GlpG [Pantoea sp. Sc1]
Length = 273
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
T V+++C ++++ + G + P FQV+R+++ + H SLLH+LFN+
Sbjct: 95 LTMTVMVLCIAVFILMQVMGDQTVMAWLAWPDD-DQHFQVWRWFSHALLHFSLLHILFNL 153
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
+ LG +E+ +GS ++F I ++ A
Sbjct: 154 MWWWYLGGAVEKRLGSGKLFVIMLISA 180
>gi|297740363|emb|CBI30545.3| unnamed protein product [Vitis vinifera]
Length = 320
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 89/193 (46%), Gaps = 33/193 (17%)
Query: 56 SAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNA 115
S V+ R Q +R T I HG + H+L NML+L+ +G LE+ G V++ + ++ +
Sbjct: 53 SRVVDRHQGWRLITCIWLHGGVFHLLANMLSLLVIGIRLEQEFGFVKVGLLYVISGFGGS 112
Query: 116 ILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSR-----SVFGLF 170
+L L + + ++G SG +F L L G S S++
Sbjct: 113 LLSGLF--------------IQENISVGASGALFGL------LGGMLSELITNWSIYA-- 150
Query: 171 NIPAKWYPLILLVLFQV---LMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIES 227
N A + L++++ + ++ +V H+ G LSGF GF L+ P + S I +
Sbjct: 151 NKLAAFLTLVIIIAINLAVGILPHVDNFAHIGGFLSGF--LLGFVFLIRPQFGWVSQIYA 208
Query: 228 SSLLSTCIRQPKF 240
S ST +PKF
Sbjct: 209 SPEHSTS-PKPKF 220
>gi|404370657|ref|ZP_10975977.1| hypothetical protein CSBG_02042 [Clostridium sp. 7_2_43FAA]
gi|226913215|gb|EEH98416.1| hypothetical protein CSBG_02042 [Clostridium sp. 7_2_43FAA]
Length = 325
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 15/149 (10%)
Query: 56 SAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNA 115
+ +I+ ++YR TS HG ++H+ FNM AL +G E+E + GS R I ++ A +
Sbjct: 176 NVLINSGEIYRLLTSAFLHGGIIHIFFNMSALNIIGREVEAVYGSKRYIAIYVISALGGS 235
Query: 116 ILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAK 175
++ L P + ++G SG IF L+ + G + R G +
Sbjct: 236 VVSYLFK------P--------NSISVGASGAIFGLLG-AMLIFGLKERDKIGKQYMKNI 280
Query: 176 WYPLILLVLFQVLMTNVSLLGHLCGILSG 204
+ L V+ + + N+ HL G++ G
Sbjct: 281 LETIGLNVIIGITIPNIDNFAHLGGLILG 309
>gi|117927224|ref|YP_871775.1| rhomboid family protein [Acidothermus cellulolyticus 11B]
gi|117647687|gb|ABK51789.1| Rhomboid family protein [Acidothermus cellulolyticus 11B]
Length = 287
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 70/155 (45%), Gaps = 25/155 (16%)
Query: 55 PSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSN 114
P A ++ + YR T++ H S+LH++FNM AL+ +G+ LE ++G +R + L
Sbjct: 114 PYAGVAGGEFYRLITAMFLHASVLHIVFNMWALLVVGAPLEALLGRLRFLVLYFLAGLGG 173
Query: 115 AILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGL---FN 171
+ L A +G SG IF L + VFG F+
Sbjct: 174 STAVYLFA-------------PRGSATLGASGAIFGLFA---------ALFVFGRRLNFD 211
Query: 172 IPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFA 206
I +++ + +++ VS GH+ G+LSG A
Sbjct: 212 IRPIGLVIVINLALTFVLSGVSWQGHIGGLLSGGA 246
>gi|407797237|ref|ZP_11144183.1| S54 family peptidase [Salimicrobium sp. MJ3]
gi|407018431|gb|EKE31157.1| S54 family peptidase [Salimicrobium sp. MJ3]
Length = 204
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 71/171 (41%), Gaps = 27/171 (15%)
Query: 58 VISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAIL 117
++S+ + +R T I H L H LFN LV G LER++G V+ I+
Sbjct: 53 LVSQGEYWRLLTPIFLHAGLSHTLFNSFTLVLFGPALERMLGKVKF------------II 100
Query: 118 HLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVI-------ETSLSGAQSRSVFGLF 170
L+A + +I Y +G SG IF L I L S + G+F
Sbjct: 101 AYLLAGIAGNIGTYAADPGAFHSHLGASGAIFGLFGIYAYMLFARKDLLDQASSQIIGVF 160
Query: 171 NIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSF 221
++L ++ L N+++LGHL G + G A + PG F
Sbjct: 161 --------IVLGLIMTFLQPNINVLGHLFGFIGGLALAPPLLKNIKPGFFF 203
>gi|417116862|ref|ZP_11967723.1| rhomboid protease GlpG [Escherichia coli 1.2741]
gi|386139406|gb|EIG80561.1| rhomboid protease GlpG [Escherichia coli 1.2741]
Length = 274
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T ++I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 95 TWVMMIACVVVFIAMQMLGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLL 154
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ ALL ++ Q G S
Sbjct: 155 WWWYLGGAVEKRLGSGKLIVIT-----------LISALLSGYVQ----QKFSGPWFGGLS 199
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 200 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFD-----LFGMSMANGA--- 251
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 252 HIAGLAVGLAMAF 264
>gi|421498003|ref|ZP_15945147.1| GlpG protein [Aeromonas media WS]
gi|407182976|gb|EKE56889.1| GlpG protein [Aeromonas media WS]
Length = 288
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPS-AVISRFQVYRFYTSIVFHGSLLHVLFN 83
T V+I C IY + + G F E+ F P+ A + +Q +R+ T H S+LH++FN
Sbjct: 110 LTLVVIIACLAIYALDAI-GLPIFDELAFHPTLAQFTDWQAWRYVTPAFIHFSVLHLVFN 168
Query: 84 MLALVPLGSELERIMGSVRMFYITILLAT 112
+L LG ++E+ +GS ++F + I+ A
Sbjct: 169 LLWWWYLGGQIEQRLGSGKLFILLIVGAA 197
>gi|254509262|ref|ZP_05121356.1| GlpG protein [Vibrio parahaemolyticus 16]
gi|219547816|gb|EED24847.1| GlpG protein [Vibrio parahaemolyticus 16]
Length = 271
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 49/87 (56%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T A++++C I+ + L DS + P+ +Q++R+ + V H S++H+ FN+L
Sbjct: 89 TLAIMLICVVIFTMQQLGAGDSVFAALHFPAFAGQEWQLWRWMSHAVLHFSVIHIAFNLL 148
Query: 86 ALVPLGSELERIMGSVRMFYITILLAT 112
LG ++E+ +GS ++ + ++ A
Sbjct: 149 WWWQLGGDIEQRLGSGKLLQLFVVSAA 175
>gi|18419592|gb|AAL69367.1|AF462204_1 unknown [Narcissus pseudonarcissus]
Length = 161
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 11/113 (9%)
Query: 50 EICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMF-YITI 108
EICF P ++ + R + S +H H+++NM++L+ G +LE MGS+ +
Sbjct: 37 EICFNPHLILKHGDLRRLFLSAFYHMGESHLVYNMMSLLWKGIQLETFMGSLEFASMVAA 96
Query: 109 LLATSNAILHLLIALLVAHI----PFYRLQNVMDECAIGFSGVIFSLIVIETS 157
LL S + LL L+ P+Y ++ ++GFSGV+F++ V+ S
Sbjct: 97 LLGLSQGMTLLLAKSLLVFFDYGTPYY------NQYSVGFSGVLFAMKVVLNS 143
>gi|448088893|ref|XP_004196660.1| Piso0_003885 [Millerozyma farinosa CBS 7064]
gi|448093058|ref|XP_004197691.1| Piso0_003885 [Millerozyma farinosa CBS 7064]
gi|359378082|emb|CCE84341.1| Piso0_003885 [Millerozyma farinosa CBS 7064]
gi|359379113|emb|CCE83310.1| Piso0_003885 [Millerozyma farinosa CBS 7064]
Length = 283
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 113/292 (38%), Gaps = 56/292 (19%)
Query: 33 CGTIYLICLLFGYDSFY------EICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLA 86
G + LLF DS + P A+ ++ R +++H ++H N++
Sbjct: 27 VGLVIFTFLLFTVDSIWGGKLSNAFSLYPGAIF-HLELNRLSFYLLYHKDIIHWTLNVVG 85
Query: 87 LVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSG 146
L S E+ G+V LL + + LI+ L+ IG SG
Sbjct: 86 LFTPLSIFEKQHGTVYTGITLNLLTVTAGVQFSLISALLGS----------STHVIGLSG 135
Query: 147 VIFSLIVIETSLSGA----------QSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
V+FS + Q R+V NIP + P I+L + +++ + S+LG
Sbjct: 136 VVFSFLSYFAYKEHQYKPILYTYQFQGRTV----NIPTLYSPFIVLAICAIILPSSSILG 191
Query: 197 HLCGILSGFAYTYGFFNLLMPGTSFYSAIESS-----SLLSTCIRQPKFILCTGGNPSGY 251
HL G+ SG+ + +L P + +IES SLL + K
Sbjct: 192 HLAGVSSGYLLALDYLKILYPPSWILQSIESKLAPAISLLDGIVTYYK-----------E 240
Query: 252 IPTYSGQNTSSSGLFSGNIWSNLSSWMPQRETSSQPTQDSRFPGRGRTLSSS 303
+ + + +N S + LF + P+ E S T + F G G L ++
Sbjct: 241 VDSVNTRNVSYTPLFFTD---------PESEVVSAQTSATPFTGEGNVLGTA 283
>gi|261823352|ref|YP_003261458.1| intramembrane serine protease GlpG [Pectobacterium wasabiae WPP163]
gi|261607365|gb|ACX89851.1| Rhomboid protease [Pectobacterium wasabiae WPP163]
gi|385873818|gb|AFI92338.1| Rhomboid protease glpG [Pectobacterium sp. SCC3193]
Length = 277
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
T +V++V ++++ + GY+S P A + Q++R+++ + H SLLH+LFN+
Sbjct: 98 LTLSVMVVTIAVFILMQISGYESVMTWLAFP-AEGQQVQLWRWFSHALLHFSLLHILFNL 156
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
+ LG +E+++G+ ++ IT++ A
Sbjct: 157 MWWWYLGGPVEKVLGTGKLLVITLVSA 183
>gi|381163863|ref|ZP_09873093.1| putative membrane protein [Saccharomonospora azurea NA-128]
gi|379255768|gb|EHY89694.1| putative membrane protein [Saccharomonospora azurea NA-128]
Length = 317
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 70/158 (44%), Gaps = 21/158 (13%)
Query: 48 FYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYIT 107
F + P AV+ + +R TS H L+H+ NMLAL LG +LE ++G VR +
Sbjct: 125 FADGVLWPEAVVVLDEWWRLLTSGFLHYGLIHLAMNMLALWVLGRDLEMLLGRVRFVALY 184
Query: 108 ILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVF 167
L + A D G SG I+ L+ GA +V
Sbjct: 185 FL-------------SMFAGGAAVFAFGAADTGTAGASGAIYGLM-------GAILVAVL 224
Query: 168 GLFNIPAKWYPLILL-VLFQVLMTNVSLLGHLCGILSG 204
L P +I+L V+ V + N+SLLGHL G+++G
Sbjct: 225 RLRLNPTTAIGIIVLNVILSVSIPNISLLGHLGGLVAG 262
>gi|418945588|ref|ZP_13498379.1| intramembrane serine protease GlpG, partial [Escherichia coli
O157:H43 str. T22]
gi|375319098|gb|EHS65353.1| intramembrane serine protease GlpG, partial [Escherichia coli
O157:H43 str. T22]
Length = 205
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T V+I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 26 TWVVMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLL 85
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ ALL ++ Q G S
Sbjct: 86 WWWYLGGAVEKRLGSGKLIVIT-----------LISALLSGYVQ----QKFSGPWFGGLS 130
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 131 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFD-----LFGMSMANGA--- 182
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 183 HIAGLAVGLAMAF 195
>gi|379795908|ref|YP_005325906.1| putative serine protease [Staphylococcus aureus subsp. aureus
MSHR1132]
gi|356872898|emb|CCE59237.1| putative serine protease [Staphylococcus aureus subsp. aureus
MSHR1132]
Length = 487
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 83/188 (44%), Gaps = 27/188 (14%)
Query: 29 VVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSLLHVLFN 83
++I + +C++ ++F ++ L + F V YR TS+ H S H+L N
Sbjct: 162 MLIFVNVLIWLCMILYLNNFSDVKLLDVGGLVHFNVVHGEWYRIITSMFLHFSFEHILMN 221
Query: 84 MLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIG 143
ML+L G +E I+GS RM I IA L + F L ++G
Sbjct: 222 MLSLFIFGKIVEAIIGSWRMLGI------------YFIAGLFGN--FVSLSFNTTTISVG 267
Query: 144 FSGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCG 200
SG IF L I +S ++ + G I L++L+ + M+N++++ H+ G
Sbjct: 268 ASGAIFGLIGAIFAMMYVSKTFNKKMLGQLMI-----ALVILIGVSLFMSNINIVAHIGG 322
Query: 201 ILSGFAYT 208
+ G T
Sbjct: 323 FVGGLLIT 330
>gi|298207995|ref|YP_003716174.1| rhomboid family protein [Croceibacter atlanticus HTCC2559]
gi|83850636|gb|EAP88504.1| rhomboid family protein [Croceibacter atlanticus HTCC2559]
Length = 247
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T V+I+ ++ LF D Y++ L FQ+++ + + HG ++H+LFNM
Sbjct: 7 TVKVLIIINVLFFAGTLFLGDRAYQLLSLYFIKNENFQLWQIVSHMFMHGGVMHILFNMY 66
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLI 121
AL GS +E +G + + AI+H L+
Sbjct: 67 ALWAFGSPIENYLGKNKFIFFYFSAGIGAAIIHTLV 102
>gi|331674910|ref|ZP_08375667.1| rhomboid protease GlpG (Intramembrane serineprotease) [Escherichia
coli TA280]
gi|331067819|gb|EGI39217.1| rhomboid protease GlpG (Intramembrane serineprotease) [Escherichia
coli TA280]
Length = 276
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T ++I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 97 TWVMMIACMVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLL 156
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ ALL ++ Q G S
Sbjct: 157 WWWYLGGAVEKRLGSGKLIVIT-----------LISALLSGYVQ----QKFSGPWFGGLS 201
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 202 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFD-----LFGMSMANGA--- 253
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 254 HIAGLAVGLAMAF 266
>gi|378581380|ref|ZP_09830027.1| putative intramembrane serine protease [Pantoea stewartii subsp.
stewartii DC283]
gi|377815887|gb|EHT98995.1| putative intramembrane serine protease [Pantoea stewartii subsp.
stewartii DC283]
Length = 272
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
T+ V++ C ++++ + G + P A F+V+R+++ + H SLLH+LFN+
Sbjct: 95 LTTVVMLACIAVFILMQVLGDRTVMYWLAWPDA-DQHFEVWRWFSHALLHFSLLHILFNL 153
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
+ LG +E+ +GS ++F I ++ A
Sbjct: 154 MWWWYLGGAVEKRLGSGKLFVILLISA 180
>gi|238786230|ref|ZP_04630177.1| Rhomboid protease glpG [Yersinia bercovieri ATCC 43970]
gi|238712871|gb|EEQ04936.1| Rhomboid protease glpG [Yersinia bercovieri ATCC 43970]
Length = 278
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 49/87 (56%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
T +++++C +Y++ +FG + P Q++R+ + H SLLH+LFN+
Sbjct: 97 LTLSLMVLCIAVYILMQIFGDYAVMSYLAWPRDSSQYLQIWRWVSHAFLHFSLLHILFNL 156
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
+ LG ++E+ +G+ ++ +TI+ A
Sbjct: 157 MWWWYLGGQMEKRLGTSKLLVLTIVSA 183
>gi|331685065|ref|ZP_08385651.1| rhomboid protease GlpG (Intramembrane serineprotease) [Escherichia
coli H299]
gi|331077436|gb|EGI48648.1| rhomboid protease GlpG (Intramembrane serineprotease) [Escherichia
coli H299]
Length = 274
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T ++I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 95 TWVMMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLL 154
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ ALL ++ Q G S
Sbjct: 155 WWWYLGGAVEKRLGSGKLIVIT-----------LISALLSGYVQ----QKFSGPWFGGLS 199
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 200 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFD-----LFGMSMANGA--- 251
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 252 HIAGLAVGLAMAF 264
>gi|433676794|ref|ZP_20508862.1| Rhomboid protease glpG [Xanthomonas translucens pv. translucens DSM
18974]
gi|430818120|emb|CCP39189.1| Rhomboid protease glpG [Xanthomonas translucens pv. translucens DSM
18974]
Length = 219
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 63/139 (45%), Gaps = 14/139 (10%)
Query: 22 IPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVIS------RFQVYRFYTSIVFHG 75
+P T A++I ++L+ LL G D+F P + FQ+++ T HG
Sbjct: 5 LPPVTQALLIGNVAVFLLQLLLGDDTFAPFMLWPISNFDAFSPGQNFQIWQLLTYGFLHG 64
Query: 76 SLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQN 135
H+LFNMLAL G LE+ G+ R ++ + +L+ ++ + N
Sbjct: 65 GFSHLLFNMLALYMFGGPLEQTWGNKRFLTYYLVCVAGAGLCQVLVG-------WWAVSN 117
Query: 136 VMDEC-AIGFSGVIFSLIV 153
D +G SG +F L++
Sbjct: 118 GGDPYPTLGASGGVFGLLL 136
>gi|415885504|ref|ZP_11547432.1| Serine protease of Rhomboid family [Bacillus methanolicus MGA3]
gi|387591173|gb|EIJ83492.1| Serine protease of Rhomboid family [Bacillus methanolicus MGA3]
Length = 518
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 87/206 (42%), Gaps = 58/206 (28%)
Query: 23 PFFTSAVVIVCGTIYLICLLFGYDS------FYEICFLPSAVISRFQVYRFYTSIVFHGS 76
PFFT +I+ ++L+ L G + + F P +I+ + +RF+T I H
Sbjct: 182 PFFTYVFMILQIAVFLLLELNGGSTNTSTLIRFGAKFNP--LINEGEWWRFFTPIFLHIG 239
Query: 77 LLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNV 136
LLH+L N LAL LG+ +ERI G+VR I +
Sbjct: 240 LLHLLMNTLALYYLGTVVERIYGNVRFMLIYL---------------------------- 271
Query: 137 MDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNI--------PAKWYPLILLVLFQVL 188
A GF+G + S V SLS S ++FG F P ++ + + + VL
Sbjct: 272 ----AAGFAGSLASF-VFSPSLSAGASGAIFGCFGALLYFGVIHPRLFFRTMGMNILVVL 326
Query: 189 MTNVSL---------LGHLCGILSGF 205
N++L GH+ G++ GF
Sbjct: 327 GINLALGFTLPGIDNAGHIGGLIGGF 352
>gi|336176302|ref|YP_004581677.1| rhomboid family protein [Frankia symbiont of Datisca glomerata]
gi|334857282|gb|AEH07756.1| Rhomboid family protein [Frankia symbiont of Datisca glomerata]
Length = 377
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%)
Query: 57 AVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAI 116
+ + + YR T+ H +LH+LFNM AL LGS+LE+I+G R + ++ A
Sbjct: 199 GIAANDEYYRLLTAAFLHAGVLHILFNMYALYLLGSQLEQILGRARYLALFVVCAIGGNT 258
Query: 117 LHLLI 121
L LI
Sbjct: 259 LSYLI 263
>gi|387502659|ref|YP_005943888.1| membrane spanning protein [Propionibacterium acnes 6609]
gi|335276704|gb|AEH28609.1| membrane spanning protein [Propionibacterium acnes 6609]
Length = 302
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 84/185 (45%), Gaps = 14/185 (7%)
Query: 27 SAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISR----FQVYRFYTSIVFHG-SLLHVL 81
S V +V T+ IC L + + V++ + +RF TS+ H S+ H+
Sbjct: 85 SDVPVVTWTLIGICFLVWVGEWLSPQVGEAVVLAPRVGFTEPWRFVTSMFGHALSIFHIG 144
Query: 82 FNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECA 141
FNM AL LG LE +G R ++ L L+A A L NV D+
Sbjct: 145 FNMYALWALGRSLEPFLGRARFLAAYLMSGLGGGALFCLMA--TADGGRAILPNV-DDGV 201
Query: 142 IGFSGVIFS----LIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGH 197
+G SG IF L++++ L GA +R ++ + I A I + +Q + L+G
Sbjct: 202 VGASGAIFGLFGVLLIVQRRL-GASTRELWVVLAINAALLLFISGIAWQAHLGGF-LVGM 259
Query: 198 LCGIL 202
+CG++
Sbjct: 260 MCGVI 264
>gi|50841776|ref|YP_055003.1| membrane spanning protein [Propionibacterium acnes KPA171202]
gi|289424590|ref|ZP_06426373.1| peptidase, S54 family [Propionibacterium acnes SK187]
gi|289428896|ref|ZP_06430576.1| peptidase, S54 family [Propionibacterium acnes J165]
gi|335050432|ref|ZP_08543398.1| peptidase, S54 family [Propionibacterium sp. 409-HC1]
gi|335054191|ref|ZP_08547011.1| peptidase, S54 family [Propionibacterium sp. 434-HC2]
gi|342212068|ref|ZP_08704793.1| peptidase, S54 family [Propionibacterium sp. CC003-HC2]
gi|354606260|ref|ZP_09024231.1| hypothetical protein HMPREF1003_00798 [Propionibacterium sp.
5_U_42AFAA]
gi|386023238|ref|YP_005941541.1| membrane spanning protein [Propionibacterium acnes 266]
gi|407934668|ref|YP_006850310.1| membrane spanning protein [Propionibacterium acnes C1]
gi|50839378|gb|AAT82045.1| membrane spanning protein [Propionibacterium acnes KPA171202]
gi|289155287|gb|EFD03969.1| peptidase, S54 family [Propionibacterium acnes SK187]
gi|289157897|gb|EFD06120.1| peptidase, S54 family [Propionibacterium acnes J165]
gi|332674694|gb|AEE71510.1| membrane spanning protein [Propionibacterium acnes 266]
gi|333765307|gb|EGL42661.1| peptidase, S54 family [Propionibacterium sp. 434-HC2]
gi|333769705|gb|EGL46802.1| peptidase, S54 family [Propionibacterium sp. 409-HC1]
gi|340767612|gb|EGR90137.1| peptidase, S54 family [Propionibacterium sp. CC003-HC2]
gi|353557667|gb|EHC27035.1| hypothetical protein HMPREF1003_00798 [Propionibacterium sp.
5_U_42AFAA]
gi|407903249|gb|AFU40079.1| membrane spanning protein [Propionibacterium acnes C1]
Length = 302
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 84/185 (45%), Gaps = 14/185 (7%)
Query: 27 SAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISR----FQVYRFYTSIVFHG-SLLHVL 81
S V +V T+ IC L + + V++ + +RF TS+ H S+ H+
Sbjct: 85 SDVPVVTWTLIGICFLVWVGEWLSPQVGEAVVLAPRVGFTEPWRFVTSMFGHALSIFHIG 144
Query: 82 FNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECA 141
FNM AL LG LE +G R ++ L L+A A L NV D+
Sbjct: 145 FNMYALWALGRSLEPFLGRARFLAAYLMSGLGGGALFCLMA--TADGGRAILPNV-DDGV 201
Query: 142 IGFSGVIFS----LIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGH 197
+G SG IF L++++ L GA +R ++ + I A I + +Q + L+G
Sbjct: 202 VGASGAIFGLFGVLLIVQRRL-GASTRELWVVLAINAALLLFISGIAWQAHLGGF-LVGM 259
Query: 198 LCGIL 202
+CG++
Sbjct: 260 MCGVI 264
>gi|606359|gb|AAA58222.1| CG Site No. 18262 [Escherichia coli str. K-12 substr. MG1655]
Length = 274
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T ++I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 95 TWVMMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLL 154
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ ALL ++ Q G S
Sbjct: 155 WWWYLGGAVEKRLGSGKLIVIT-----------LISALLSGYVQ----QKFSGPWFGGLS 199
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 200 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFD-----LFGMSMANGA--- 251
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 252 HIAGLAVGLAMAF 264
>gi|424931398|ref|ZP_18349770.1| Rhomboid protease glpG (Intramembrane serine protease) [Klebsiella
pneumoniae subsp. pneumoniae KpQ3]
gi|407805585|gb|EKF76836.1| Rhomboid protease glpG (Intramembrane serine protease) [Klebsiella
pneumoniae subsp. pneumoniae KpQ3]
Length = 276
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 49/87 (56%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
FT A++++C ++++ L G P +F+ +R+++ H SL+H+LFN+
Sbjct: 96 FTWAILLICIAVFILQNLLGDQPVMIWLAWPYDPSLQFEAWRYFSHAFMHFSLMHILFNL 155
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
L LG +E+ +GS ++ IT++ A
Sbjct: 156 LWWWYLGGAVEKRIGSGKLVVITVISA 182
>gi|227327619|ref|ZP_03831643.1| intramembrane serine protease GlpG [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 276
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
T ++++V ++++ + GY+S P A + +V+R+++ ++ H SLLH+LFN+
Sbjct: 97 LTLSLMVVTIAVFILMQISGYESVMVWLAFP-AEGQQIEVWRWFSHVLLHFSLLHILFNL 155
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
+ LG +E+++G+ ++ IT++ A
Sbjct: 156 MWWWYLGGPVEKVLGTGKLLVITLVSA 182
>gi|450193860|ref|ZP_21892171.1| intramembrane serine protease GlpG [Escherichia coli SEPT362]
gi|449317096|gb|EMD07190.1| intramembrane serine protease GlpG [Escherichia coli SEPT362]
Length = 276
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T ++I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 97 TWVMMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLL 156
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ ALL ++ Q G S
Sbjct: 157 WWWYLGGAVEKRLGSGKLIVIT-----------LISALLSGYVQ----QKFSGPWFGGLS 201
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 202 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFD-----LFGMSMANGA--- 253
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 254 HIAGLAVGLAMAF 266
>gi|227112207|ref|ZP_03825863.1| intramembrane serine protease GlpG [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 276
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
T ++++V ++++ + GY+S P A + +V+R+++ ++ H SLLH+LFN+
Sbjct: 97 LTLSLMVVTIAVFILMQISGYESVMVWLAFP-AEGQQIEVWRWFSHVLLHFSLLHILFNL 155
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
+ LG +E+++G+ ++ IT++ A
Sbjct: 156 MWWWYLGGPVEKVLGTGKLLVITLVSA 182
>gi|422784053|ref|ZP_16836836.1| rhomboid family protein [Escherichia coli TW10509]
gi|323974773|gb|EGB69885.1| rhomboid family protein [Escherichia coli TW10509]
Length = 274
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T ++I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 95 TWVMMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLL 154
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ ALL ++ Q G S
Sbjct: 155 WWWYLGGAVEKRLGSGKLIVIT-----------LISALLSGYVQ----QKFSGPWFGGLS 199
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 200 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFD-----LFGMSMANGA--- 251
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 252 HIAGLAVGLAMAF 264
>gi|288933195|ref|YP_003437254.1| Rhomboid protease [Klebsiella variicola At-22]
gi|288887924|gb|ADC56242.1| Rhomboid protease [Klebsiella variicola At-22]
Length = 274
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 49/87 (56%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
FT A++++C ++++ L G P +F+ +R+++ H SL+H+LFN+
Sbjct: 94 FTWAILLICIAVFILQNLLGDQPVMIWLAWPYDPSLQFEAWRYFSHAFMHFSLMHILFNL 153
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
L LG +E+ +GS ++ IT++ A
Sbjct: 154 LWWWYLGGAVEKRIGSGKLVVITVISA 180
>gi|440729654|ref|ZP_20909776.1| hypothetical protein A989_00090 [Xanthomonas translucens DAR61454]
gi|440380945|gb|ELQ17496.1| hypothetical protein A989_00090 [Xanthomonas translucens DAR61454]
Length = 218
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 63/139 (45%), Gaps = 14/139 (10%)
Query: 22 IPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVIS------RFQVYRFYTSIVFHG 75
+P T A++I ++L+ LL G D+F P + FQ+++ T HG
Sbjct: 5 LPPVTQALLIGNVAVFLLQLLLGDDTFAPFMLWPISNFDAFSPGQNFQIWQLLTYGFLHG 64
Query: 76 SLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQN 135
H+LFNMLAL G LE+ G+ R ++ + +L+ ++ + N
Sbjct: 65 GFSHLLFNMLALYMFGGPLEQTWGNKRFLTYYLVCVAGAGLCQVLVG-------WWAVSN 117
Query: 136 VMDEC-AIGFSGVIFSLIV 153
D +G SG +F L++
Sbjct: 118 GGDPYPTLGASGGVFGLLL 136
>gi|365962008|ref|YP_004943574.1| membrane spanning protein [Propionibacterium acnes TypeIA2 P.acn31]
gi|365973189|ref|YP_004954748.1| membrane spanning protein [Propionibacterium acnes TypeIA2 P.acn33]
gi|365738689|gb|AEW82891.1| membrane spanning protein [Propionibacterium acnes TypeIA2 P.acn31]
gi|365743188|gb|AEW78385.1| membrane spanning protein [Propionibacterium acnes TypeIA2 P.acn33]
gi|456740418|gb|EMF64939.1| membrane spanning protein [Propionibacterium acnes FZ1/2/0]
Length = 302
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 84/185 (45%), Gaps = 14/185 (7%)
Query: 27 SAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISR----FQVYRFYTSIVFHG-SLLHVL 81
S V +V T+ IC L + + V++ + +RF TS+ H S+ H+
Sbjct: 85 SDVPVVTWTLIGICFLVWVGEWLSPQVGEAVVLAPRVGFTEPWRFVTSMFGHALSIFHIG 144
Query: 82 FNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECA 141
FNM AL LG LE +G R ++ L L+A A L NV D+
Sbjct: 145 FNMYALWALGRSLEPFLGRARFLAAYLMSGLGGGALFCLMA--TADGGRAILPNV-DDGV 201
Query: 142 IGFSGVIFS----LIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGH 197
+G SG IF L++++ L GA +R ++ + I A I + +Q + L+G
Sbjct: 202 VGASGAIFGLFGVLLIVQRRL-GASTRELWVVLAINAALLLFISGIAWQAHLGGF-LVGM 259
Query: 198 LCGIL 202
+CG++
Sbjct: 260 MCGVI 264
>gi|295129855|ref|YP_003580518.1| peptidase, S54 (rhomboid) family protein [Propionibacterium acnes
SK137]
gi|417931189|ref|ZP_12574562.1| peptidase, S54 family [Propionibacterium acnes SK182]
gi|291376681|gb|ADE00536.1| peptidase, S54 (rhomboid) family protein [Propionibacterium acnes
SK137]
gi|340769512|gb|EGR92036.1| peptidase, S54 family [Propionibacterium acnes SK182]
Length = 302
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 70/145 (48%), Gaps = 10/145 (6%)
Query: 63 QVYRFYTSIVFHG-SLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLI 121
+ +RF TS+ H S+ H+ FNM AL LG LE +G R ++ L L+
Sbjct: 125 EPWRFVTSMFGHALSIFHIGFNMYALWALGRSLEPFLGRARFLAAYLMSGLGGGALFCLM 184
Query: 122 ALLVAHIPFYRLQNVMDECAIGFSGVIFS----LIVIETSLSGAQSRSVFGLFNIPAKWY 177
A A L NV D+ +G SG IF L++++ L GA +R ++ + I A
Sbjct: 185 A--TADGGRAILPNV-DDGVVGASGAIFGLFGVLLIVQRRL-GASTRELWVVLAINAALL 240
Query: 178 PLILLVLFQVLMTNVSLLGHLCGIL 202
I + +Q + L+G +CG++
Sbjct: 241 LFISGIAWQAHLGGF-LVGMMCGVI 264
>gi|365964250|ref|YP_004945815.1| membrane spanning protein [Propionibacterium acnes TypeIA2 P.acn17]
gi|365740931|gb|AEW80625.1| membrane spanning protein [Propionibacterium acnes TypeIA2 P.acn17]
Length = 302
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 84/185 (45%), Gaps = 14/185 (7%)
Query: 27 SAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISR----FQVYRFYTSIVFHG-SLLHVL 81
S V +V T+ IC L + + V++ + +RF TS+ H S+ H+
Sbjct: 85 SDVPVVTWTLIGICFLVWVGEWLSPQVGEAVVLAPRVGFTEPWRFVTSMFGHALSIFHIG 144
Query: 82 FNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECA 141
FNM AL LG LE +G R ++ L L+A A L NV D+
Sbjct: 145 FNMYALWALGRSLEPFLGRARFLAAYLMSGLGGGALFCLMA--TADGGRAILPNV-DDGV 201
Query: 142 IGFSGVIFS----LIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGH 197
+G SG IF L++++ L GA +R ++ + I A I + +Q + L+G
Sbjct: 202 VGASGAIFGLFGVLLIVQRRL-GASTRELWVVLAINAALLLFISGIAWQAHLGGF-LVGM 259
Query: 198 LCGIL 202
+CG++
Sbjct: 260 MCGVI 264
>gi|365140731|ref|ZP_09346710.1| rhomboid protease glpG [Klebsiella sp. 4_1_44FAA]
gi|425074490|ref|ZP_18477593.1| rhomboid protease glpG [Klebsiella pneumoniae subsp. pneumoniae
WGLW1]
gi|425083566|ref|ZP_18486663.1| rhomboid protease glpG [Klebsiella pneumoniae subsp. pneumoniae
WGLW2]
gi|425085126|ref|ZP_18488219.1| rhomboid protease glpG [Klebsiella pneumoniae subsp. pneumoniae
WGLW3]
gi|425093681|ref|ZP_18496765.1| rhomboid protease glpG [Klebsiella pneumoniae subsp. pneumoniae
WGLW5]
gi|363653387|gb|EHL92357.1| rhomboid protease glpG [Klebsiella sp. 4_1_44FAA]
gi|405595955|gb|EKB69325.1| rhomboid protease glpG [Klebsiella pneumoniae subsp. pneumoniae
WGLW1]
gi|405598767|gb|EKB71969.1| rhomboid protease glpG [Klebsiella pneumoniae subsp. pneumoniae
WGLW2]
gi|405608541|gb|EKB81492.1| rhomboid protease glpG [Klebsiella pneumoniae subsp. pneumoniae
WGLW3]
gi|405610656|gb|EKB83451.1| rhomboid protease glpG [Klebsiella pneumoniae subsp. pneumoniae
WGLW5]
Length = 274
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 49/87 (56%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
FT A++++C ++++ L G P +F+ +R+++ H SL+H+LFN+
Sbjct: 94 FTWAILLICIAVFILQNLLGDQPVMIWLAWPYDPSLQFEAWRYFSHAFMHFSLMHILFNL 153
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
L LG +E+ +GS ++ IT++ A
Sbjct: 154 LWWWYLGGAVEKRIGSGKLVVITVISA 180
>gi|386626211|ref|YP_006145939.1| rhomboid intramembrane serine protease [Escherichia coli O7:K1 str.
CE10]
gi|349739947|gb|AEQ14653.1| rhomboid intramembrane serine protease [Escherichia coli O7:K1 str.
CE10]
Length = 280
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T ++I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 101 TWVMMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLL 160
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ ALL ++ Q G S
Sbjct: 161 WWWYLGGAVEKRLGSGKLIVIT-----------LISALLSGYVQ----QKFSGPWFGGLS 205
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 206 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFD-----LFGMSMANGA--- 257
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 258 HIAGLAVGLAMAF 270
>gi|191171556|ref|ZP_03033104.1| peptidase, S54 (rhomboid) family [Escherichia coli F11]
gi|194431174|ref|ZP_03063467.1| peptidase, S54 (rhomboid) family [Shigella dysenteriae 1012]
gi|297518641|ref|ZP_06937027.1| intramembrane serine protease GlpG [Escherichia coli OP50]
gi|301021770|ref|ZP_07185735.1| peptidase, S54 family protein [Escherichia coli MS 196-1]
gi|306816239|ref|ZP_07450377.1| intramembrane serine protease GlpG [Escherichia coli NC101]
gi|331659713|ref|ZP_08360651.1| rhomboid protease GlpG (Intramembrane serineprotease) [Escherichia
coli TA206]
gi|386606001|ref|YP_006112301.1| intramembrane serine protease GlpG [Escherichia coli UM146]
gi|416280373|ref|ZP_11645340.1| intramembrane serine protease GlpG [Shigella boydii ATCC 9905]
gi|417087165|ref|ZP_11954212.1| peptidase, S54 (rhomboid) family [Escherichia coli cloneA_i1]
gi|417264030|ref|ZP_12051424.1| rhomboid protease GlpG [Escherichia coli 2.3916]
gi|417588509|ref|ZP_12239272.1| rhomboid family protein [Escherichia coli STEC_C165-02]
gi|417691770|ref|ZP_12340979.1| rhomboid family protein [Shigella boydii 5216-82]
gi|417757754|ref|ZP_12405819.1| rhomboid family protein [Escherichia coli DEC2B]
gi|418305051|ref|ZP_12916845.1| rhomboid family protein [Escherichia coli UMNF18]
gi|418998798|ref|ZP_13546381.1| rhomboid family protein [Escherichia coli DEC1A]
gi|419004130|ref|ZP_13551642.1| rhomboid family protein [Escherichia coli DEC1B]
gi|419015443|ref|ZP_13562781.1| rhomboid protease glpG [Escherichia coli DEC1D]
gi|419031029|ref|ZP_13578176.1| rhomboid family protein [Escherichia coli DEC2C]
gi|419041732|ref|ZP_13588749.1| rhomboid family protein [Escherichia coli DEC2E]
gi|419144509|ref|ZP_13689239.1| rhomboid protease glpG [Escherichia coli DEC6A]
gi|419166298|ref|ZP_13710748.1| rhomboid family protein [Escherichia coli DEC6E]
gi|419177105|ref|ZP_13720915.1| rhomboid family protein [Escherichia coli DEC7B]
gi|419918645|ref|ZP_14436825.1| intramembrane serine protease GlpG [Escherichia coli KD2]
gi|419933920|ref|ZP_14451067.1| intramembrane serine protease GlpG [Escherichia coli 576-1]
gi|419944059|ref|ZP_14460570.1| intramembrane serine protease GlpG [Escherichia coli HM605]
gi|420349401|ref|ZP_14850779.1| rhomboid protease glpG [Shigella boydii 965-58]
gi|421776607|ref|ZP_16213210.1| intramembrane serine protease GlpG [Escherichia coli AD30]
gi|422751261|ref|ZP_16805170.1| rhomboid family protein [Escherichia coli H252]
gi|422756927|ref|ZP_16810749.1| rhomboid family protein [Escherichia coli H263]
gi|422768787|ref|ZP_16822511.1| rhomboid family protein [Escherichia coli E1520]
gi|422793472|ref|ZP_16846168.1| rhomboid family protein [Escherichia coli TA007]
gi|425121735|ref|ZP_18523418.1| rhomboid family protease GlpG [Escherichia coli 8.0569]
gi|432383318|ref|ZP_19626243.1| rhomboid protease glpG [Escherichia coli KTE15]
gi|432389225|ref|ZP_19632104.1| rhomboid protease glpG [Escherichia coli KTE16]
gi|432413642|ref|ZP_19656296.1| rhomboid protease glpG [Escherichia coli KTE39]
gi|432438228|ref|ZP_19680611.1| rhomboid protease glpG [Escherichia coli KTE188]
gi|432458541|ref|ZP_19700717.1| rhomboid protease glpG [Escherichia coli KTE201]
gi|432497535|ref|ZP_19739327.1| rhomboid protease glpG [Escherichia coli KTE214]
gi|432506292|ref|ZP_19748011.1| rhomboid protease glpG [Escherichia coli KTE220]
gi|432515809|ref|ZP_19753024.1| rhomboid protease glpG [Escherichia coli KTE224]
gi|432525747|ref|ZP_19762865.1| rhomboid protease glpG [Escherichia coli KTE230]
gi|432570648|ref|ZP_19807154.1| rhomboid protease glpG [Escherichia coli KTE53]
gi|432594614|ref|ZP_19830926.1| rhomboid protease glpG [Escherichia coli KTE60]
gi|432609454|ref|ZP_19845635.1| rhomboid protease glpG [Escherichia coli KTE67]
gi|432613424|ref|ZP_19849581.1| rhomboid protease glpG [Escherichia coli KTE72]
gi|432618658|ref|ZP_19854762.1| rhomboid protease glpG [Escherichia coli KTE75]
gi|432648091|ref|ZP_19883876.1| rhomboid protease glpG [Escherichia coli KTE86]
gi|432653012|ref|ZP_19888757.1| rhomboid protease glpG [Escherichia coli KTE87]
gi|432657656|ref|ZP_19893352.1| rhomboid protease glpG [Escherichia coli KTE93]
gi|432700935|ref|ZP_19936079.1| rhomboid protease glpG [Escherichia coli KTE169]
gi|432785386|ref|ZP_20019563.1| rhomboid protease glpG [Escherichia coli KTE63]
gi|432846498|ref|ZP_20079140.1| rhomboid protease glpG [Escherichia coli KTE141]
gi|432907123|ref|ZP_20115599.1| rhomboid protease glpG [Escherichia coli KTE194]
gi|432940228|ref|ZP_20138142.1| rhomboid protease glpG [Escherichia coli KTE183]
gi|432973694|ref|ZP_20162537.1| rhomboid protease glpG [Escherichia coli KTE207]
gi|432975621|ref|ZP_20164455.1| rhomboid protease glpG [Escherichia coli KTE209]
gi|432987266|ref|ZP_20175978.1| rhomboid protease glpG [Escherichia coli KTE215]
gi|433001778|ref|ZP_20190296.1| rhomboid protease glpG [Escherichia coli KTE223]
gi|433040419|ref|ZP_20228009.1| rhomboid protease glpG [Escherichia coli KTE113]
gi|433059903|ref|ZP_20246938.1| rhomboid protease glpG [Escherichia coli KTE124]
gi|433089078|ref|ZP_20275440.1| rhomboid protease glpG [Escherichia coli KTE137]
gi|433103006|ref|ZP_20289077.1| rhomboid protease glpG [Escherichia coli KTE145]
gi|433126987|ref|ZP_20312532.1| rhomboid protease glpG [Escherichia coli KTE160]
gi|433141051|ref|ZP_20326295.1| rhomboid protease glpG [Escherichia coli KTE167]
gi|433146024|ref|ZP_20331156.1| rhomboid protease glpG [Escherichia coli KTE168]
gi|433151056|ref|ZP_20336055.1| rhomboid protease glpG [Escherichia coli KTE174]
gi|433190225|ref|ZP_20374312.1| rhomboid protease glpG [Escherichia coli KTE88]
gi|433200165|ref|ZP_20384051.1| rhomboid protease glpG [Escherichia coli KTE94]
gi|433209543|ref|ZP_20393209.1| rhomboid protease glpG [Escherichia coli KTE97]
gi|433214395|ref|ZP_20397976.1| rhomboid protease glpG [Escherichia coli KTE99]
gi|442593911|ref|ZP_21011837.1| GlpG protein (membrane protein of glp regulon) [Escherichia coli
O10:K5(L):H4 str. ATCC 23506]
gi|442596744|ref|ZP_21014548.1| GlpG protein (membrane protein of glp regulon) [Escherichia coli
O5:K4(L):H4 str. ATCC 23502]
gi|190908183|gb|EDV67774.1| peptidase, S54 (rhomboid) family [Escherichia coli F11]
gi|194420629|gb|EDX36705.1| peptidase, S54 (rhomboid) family [Shigella dysenteriae 1012]
gi|299881462|gb|EFI89673.1| peptidase, S54 family protein [Escherichia coli MS 196-1]
gi|305850635|gb|EFM51092.1| intramembrane serine protease GlpG [Escherichia coli NC101]
gi|307628485|gb|ADN72789.1| intramembrane serine protease GlpG [Escherichia coli UM146]
gi|320181916|gb|EFW56822.1| intramembrane serine protease GlpG [Shigella boydii ATCC 9905]
gi|323934587|gb|EGB30987.1| rhomboid family protein [Escherichia coli E1520]
gi|323950080|gb|EGB45963.1| rhomboid family protein [Escherichia coli H252]
gi|323954640|gb|EGB50422.1| rhomboid family protein [Escherichia coli H263]
gi|323970021|gb|EGB65296.1| rhomboid family protein [Escherichia coli TA007]
gi|331052928|gb|EGI24961.1| rhomboid protease GlpG (Intramembrane serineprotease) [Escherichia
coli TA206]
gi|332085575|gb|EGI90741.1| rhomboid family protein [Shigella boydii 5216-82]
gi|339417149|gb|AEJ58821.1| rhomboid family protein [Escherichia coli UMNF18]
gi|345332582|gb|EGW65038.1| rhomboid family protein [Escherichia coli STEC_C165-02]
gi|355350085|gb|EHF99286.1| peptidase, S54 (rhomboid) family [Escherichia coli cloneA_i1]
gi|377840242|gb|EHU05317.1| rhomboid family protein [Escherichia coli DEC1A]
gi|377843136|gb|EHU08177.1| rhomboid family protein [Escherichia coli DEC1B]
gi|377853797|gb|EHU18688.1| rhomboid protease glpG [Escherichia coli DEC1D]
gi|377871405|gb|EHU36069.1| rhomboid family protein [Escherichia coli DEC2B]
gi|377873699|gb|EHU38331.1| rhomboid family protein [Escherichia coli DEC2C]
gi|377886444|gb|EHU50925.1| rhomboid family protein [Escherichia coli DEC2E]
gi|377990754|gb|EHV53912.1| rhomboid protease glpG [Escherichia coli DEC6A]
gi|378007033|gb|EHV70003.1| rhomboid family protein [Escherichia coli DEC6E]
gi|378029772|gb|EHV92377.1| rhomboid family protein [Escherichia coli DEC7B]
gi|386221739|gb|EII44168.1| rhomboid protease GlpG [Escherichia coli 2.3916]
gi|388389761|gb|EIL51279.1| intramembrane serine protease GlpG [Escherichia coli KD2]
gi|388410084|gb|EIL70344.1| intramembrane serine protease GlpG [Escherichia coli 576-1]
gi|388419676|gb|EIL79395.1| intramembrane serine protease GlpG [Escherichia coli HM605]
gi|391266495|gb|EIQ25445.1| rhomboid protease glpG [Shigella boydii 965-58]
gi|408458295|gb|EKJ82083.1| intramembrane serine protease GlpG [Escherichia coli AD30]
gi|408565754|gb|EKK41836.1| rhomboid family protease GlpG [Escherichia coli 8.0569]
gi|430903216|gb|ELC24953.1| rhomboid protease glpG [Escherichia coli KTE16]
gi|430903703|gb|ELC25439.1| rhomboid protease glpG [Escherichia coli KTE15]
gi|430933471|gb|ELC53877.1| rhomboid protease glpG [Escherichia coli KTE39]
gi|430960782|gb|ELC78833.1| rhomboid protease glpG [Escherichia coli KTE188]
gi|430979999|gb|ELC96763.1| rhomboid protease glpG [Escherichia coli KTE201]
gi|431021070|gb|ELD34399.1| rhomboid protease glpG [Escherichia coli KTE214]
gi|431035640|gb|ELD47023.1| rhomboid protease glpG [Escherichia coli KTE220]
gi|431038504|gb|ELD49400.1| rhomboid protease glpG [Escherichia coli KTE224]
gi|431048858|gb|ELD58826.1| rhomboid protease glpG [Escherichia coli KTE230]
gi|431097721|gb|ELE03048.1| rhomboid protease glpG [Escherichia coli KTE53]
gi|431126071|gb|ELE28425.1| rhomboid protease glpG [Escherichia coli KTE60]
gi|431135765|gb|ELE37640.1| rhomboid protease glpG [Escherichia coli KTE67]
gi|431146446|gb|ELE47882.1| rhomboid protease glpG [Escherichia coli KTE72]
gi|431151709|gb|ELE52722.1| rhomboid protease glpG [Escherichia coli KTE75]
gi|431178064|gb|ELE77977.1| rhomboid protease glpG [Escherichia coli KTE86]
gi|431187427|gb|ELE86928.1| rhomboid protease glpG [Escherichia coli KTE87]
gi|431187767|gb|ELE87266.1| rhomboid protease glpG [Escherichia coli KTE93]
gi|431240046|gb|ELF34508.1| rhomboid protease glpG [Escherichia coli KTE169]
gi|431326465|gb|ELG13811.1| rhomboid protease glpG [Escherichia coli KTE63]
gi|431392733|gb|ELG76304.1| rhomboid protease glpG [Escherichia coli KTE141]
gi|431428089|gb|ELH10031.1| rhomboid protease glpG [Escherichia coli KTE194]
gi|431460122|gb|ELH40411.1| rhomboid protease glpG [Escherichia coli KTE183]
gi|431479041|gb|ELH58784.1| rhomboid protease glpG [Escherichia coli KTE207]
gi|431486435|gb|ELH66085.1| rhomboid protease glpG [Escherichia coli KTE209]
gi|431494511|gb|ELH74099.1| rhomboid protease glpG [Escherichia coli KTE215]
gi|431504760|gb|ELH83384.1| rhomboid protease glpG [Escherichia coli KTE223]
gi|431548991|gb|ELI23082.1| rhomboid protease glpG [Escherichia coli KTE113]
gi|431566545|gb|ELI39568.1| rhomboid protease glpG [Escherichia coli KTE124]
gi|431601699|gb|ELI71210.1| rhomboid protease glpG [Escherichia coli KTE137]
gi|431616453|gb|ELI85514.1| rhomboid protease glpG [Escherichia coli KTE145]
gi|431641260|gb|ELJ09003.1| rhomboid protease glpG [Escherichia coli KTE160]
gi|431656707|gb|ELJ23682.1| rhomboid protease glpG [Escherichia coli KTE167]
gi|431658491|gb|ELJ25404.1| rhomboid protease glpG [Escherichia coli KTE168]
gi|431667645|gb|ELJ34225.1| rhomboid protease glpG [Escherichia coli KTE174]
gi|431702582|gb|ELJ67378.1| rhomboid protease glpG [Escherichia coli KTE88]
gi|431717909|gb|ELJ81991.1| rhomboid protease glpG [Escherichia coli KTE94]
gi|431728418|gb|ELJ92098.1| rhomboid protease glpG [Escherichia coli KTE97]
gi|431732395|gb|ELJ95850.1| rhomboid protease glpG [Escherichia coli KTE99]
gi|441606184|emb|CCP97117.1| GlpG protein (membrane protein of glp regulon) [Escherichia coli
O10:K5(L):H4 str. ATCC 23506]
gi|441654852|emb|CCQ00461.1| GlpG protein (membrane protein of glp regulon) [Escherichia coli
O5:K4(L):H4 str. ATCC 23502]
Length = 274
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T ++I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 95 TWVMMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLL 154
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ ALL ++ Q G S
Sbjct: 155 WWWYLGGAVEKRLGSGKLIVIT-----------LISALLSGYVQ----QKFSGPWFGGLS 199
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 200 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFD-----LFGMSMANGA--- 251
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 252 HIAGLAVGLAMAF 264
>gi|110807258|ref|YP_690778.1| intramembrane serine protease GlpG [Shigella flexneri 5 str. 8401]
gi|424839641|ref|ZP_18264278.1| intramembrane serine protease GlpG [Shigella flexneri 5a str. M90T]
gi|110616806|gb|ABF05473.1| protein of glp regulon [Shigella flexneri 5 str. 8401]
gi|383468693|gb|EID63714.1| intramembrane serine protease GlpG [Shigella flexneri 5a str. M90T]
Length = 257
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T ++I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 78 TWVMMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLL 137
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ ALL ++ Q G S
Sbjct: 138 WWWYLGGAVEKRLGSGKLIVIT-----------LISALLSGYVQ----QKFSGPWFGGLS 182
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 183 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFD-----LFGMSMANGA--- 234
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 235 HIAGLAVGLAMAF 247
>gi|386621064|ref|YP_006140644.1| intra membrane serine protease [Escherichia coli NA114]
gi|417285412|ref|ZP_12072703.1| rhomboid protease GlpG [Escherichia coli TW07793]
gi|417663983|ref|ZP_12313563.1| GlpG protein (membrane protein of glp regulon) [Escherichia coli
AA86]
gi|432448023|ref|ZP_19690319.1| rhomboid protease glpG [Escherichia coli KTE191]
gi|432922550|ref|ZP_20125394.1| rhomboid protease glpG [Escherichia coli KTE173]
gi|432929280|ref|ZP_20130330.1| rhomboid protease glpG [Escherichia coli KTE175]
gi|433025285|ref|ZP_20213257.1| rhomboid protease glpG [Escherichia coli KTE106]
gi|330909456|gb|EGH37970.1| GlpG protein (membrane protein of glp regulon) [Escherichia coli
AA86]
gi|333971565|gb|AEG38370.1| intra membrane serine protease [Escherichia coli NA114]
gi|386250653|gb|EII96820.1| rhomboid protease GlpG [Escherichia coli TW07793]
gi|430971103|gb|ELC88125.1| rhomboid protease glpG [Escherichia coli KTE191]
gi|431435548|gb|ELH17157.1| rhomboid protease glpG [Escherichia coli KTE173]
gi|431440688|gb|ELH22016.1| rhomboid protease glpG [Escherichia coli KTE175]
gi|431531635|gb|ELI08292.1| rhomboid protease glpG [Escherichia coli KTE106]
Length = 274
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T ++I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 95 TWVMMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLL 154
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ ALL ++ Q G S
Sbjct: 155 WWWYLGGAVEKRLGSGKLIVIT-----------LISALLSGYVQ----QKFSGPWFGGLS 199
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 200 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFD-----LFGMSMANGA--- 251
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 252 HIAGLAVGLAMAF 264
>gi|424099098|ref|ZP_17834370.1| rhomboid protease glpG [Escherichia coli FRIK1985]
gi|390657784|gb|EIN35595.1| rhomboid protease glpG [Escherichia coli FRIK1985]
Length = 265
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T ++I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 86 TWVMMIACVVVFIAMQILGDQEVMLWLAWPFDPALKFEFWRYFTHALMHFSLMHILFNLL 145
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ ALL ++ Q G S
Sbjct: 146 WWWYLGGAVEKRLGSGKLIVIT-----------LISALLSGYVQ----QKFSGPWFGGLS 190
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 191 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFD-----LFGMSMANGA--- 242
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 243 HIAGLAVGLAMAF 255
>gi|374594324|ref|ZP_09667329.1| Rhomboid family protein [Gillisia limnaea DSM 15749]
gi|373872399|gb|EHQ04396.1| Rhomboid family protein [Gillisia limnaea DSM 15749]
Length = 247
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T V+I+ ++ +F D Y+I L F +++ T + HGS +H+LFNM
Sbjct: 7 TVKVLIIINAMFFAGTMFIGDFTYKIFSLWFFQNDNFGIWQVITHMFMHGSFMHILFNMY 66
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLI 121
AL GS +E+++G + + AI+H L+
Sbjct: 67 ALWAFGSPIEQMLGQKKFLFFYFSCGIGAAIIHSLV 102
>gi|441649975|ref|XP_003276709.2| PREDICTED: rhomboid domain-containing protein 2 [Nomascus
leucogenys]
Length = 248
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 7/153 (4%)
Query: 54 LPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATS 113
L S + +QVYR T I + + + +L + + ER +G+VR + T++ A
Sbjct: 95 LKSEALRNWQVYRLVTYIFVYENPISLLCGAIIIWRFAGNFERTVGTVRHCFFTVIFAIF 154
Query: 114 NAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIP 173
+AI+ L + + +L V D A GF+ V F+++ + T S + VFG+ +P
Sbjct: 155 SAIIFLSFEAVSS---LSKLGEVED--ARGFTPVAFAMLGVTTVRSRMRRALVFGMV-VP 208
Query: 174 AKWYPLILLVLFQVLMTNVSLLGHLCGILSGFA 206
+ P +LL L+ S L ++CG+ G A
Sbjct: 209 SVLVPWLLLGA-SWLIPQTSFLSNVCGLSIGLA 240
>gi|417282005|ref|ZP_12069305.1| rhomboid protease GlpG [Escherichia coli 3003]
gi|386246334|gb|EII88064.1| rhomboid protease GlpG [Escherichia coli 3003]
Length = 274
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T ++I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 95 TWMMMIACVVVFITMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLL 154
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ ALL ++ Q G S
Sbjct: 155 WWWYLGGAVEKRLGSGKLIVIT-----------LISALLSGYVQ----QKFSGPWFGGLS 199
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 200 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFD-----LFGMSMANGA--- 251
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 252 HIAGLAVGLAMAF 264
>gi|255526224|ref|ZP_05393142.1| Rhomboid family protein [Clostridium carboxidivorans P7]
gi|296185575|ref|ZP_06853984.1| peptidase, S54 (rhomboid) family protein [Clostridium
carboxidivorans P7]
gi|255510064|gb|EET86386.1| Rhomboid family protein [Clostridium carboxidivorans P7]
gi|296049703|gb|EFG89128.1| peptidase, S54 (rhomboid) family protein [Clostridium
carboxidivorans P7]
Length = 323
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 74/166 (44%), Gaps = 29/166 (17%)
Query: 51 ICFLPSAV---ISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYIT 107
+ FL + V I+R + YR T + HG ++H+L NM AL LG +E+I G R I
Sbjct: 170 LVFLGAKVNYLIARGEYYRLITCMFLHGGIMHLLLNMFALYSLGPFIEKIYGKTRYLIIY 229
Query: 108 ILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSL----IVIETSLSGAQS 163
L ++I + + V +IG SG IF L ++ +
Sbjct: 230 FLSGIVSSIFSYMFSTAV---------------SIGASGAIFGLLGAALIFAMKMKDRIG 274
Query: 164 RSVFGLFNIPAKWYPLILLVLFQVL-MTNVSLLGHLCGILSGFAYT 208
R + NI + +I + LF M+NV GHL G++ G A T
Sbjct: 275 RGF--ITNIVS----VIFINLFMGFSMSNVDNFGHLGGLIGGSAIT 314
>gi|206577327|ref|YP_002236206.1| intramembrane serine protease GlpG [Klebsiella pneumoniae 342]
gi|290511999|ref|ZP_06551367.1| GlpG protein [Klebsiella sp. 1_1_55]
gi|226729482|sp|B5XTR5.1|GLPG_KLEP3 RecName: Full=Rhomboid protease GlpG; AltName: Full=Intramembrane
serine protease
gi|206566385|gb|ACI08161.1| peptidase, S54 (rhomboid) family [Klebsiella pneumoniae 342]
gi|289775789|gb|EFD83789.1| GlpG protein [Klebsiella sp. 1_1_55]
Length = 276
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 49/87 (56%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
FT A++++C ++++ L G P +F+ +R+++ H SL+H+LFN+
Sbjct: 96 FTWAILLICIAVFILQNLLGDQPVMIWLAWPYDPSLQFEAWRYFSHAFMHFSLMHILFNL 155
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
L LG +E+ +GS ++ IT++ A
Sbjct: 156 LWWWYLGGAVEKRIGSGKLVVITVISA 182
>gi|152972298|ref|YP_001337444.1| intramembrane serine protease GlpG [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238896887|ref|YP_002921632.1| intramembrane serine protease GlpG [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|262045257|ref|ZP_06018283.1| rhomboid protease GlpG [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|329998340|ref|ZP_08303075.1| rhomboid protease GlpG [Klebsiella sp. MS 92-3]
gi|378981101|ref|YP_005229242.1| intramembrane serine protease GlpG [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|386036926|ref|YP_005956839.1| intramembrane serine protease GlpG [Klebsiella pneumoniae KCTC
2242]
gi|402778618|ref|YP_006634164.1| glpG protein (membrane protein of glp regulon) [Klebsiella
pneumoniae subsp. pneumoniae 1084]
gi|419973717|ref|ZP_14489140.1| intramembrane serine protease GlpG [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|419979109|ref|ZP_14494402.1| intramembrane serine protease GlpG [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|419984556|ref|ZP_14499702.1| intramembrane serine protease GlpG [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|419990385|ref|ZP_14505357.1| intramembrane serine protease GlpG [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|419996635|ref|ZP_14511436.1| intramembrane serine protease GlpG [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|420002555|ref|ZP_14517206.1| intramembrane serine protease GlpG [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|420008573|ref|ZP_14523062.1| intramembrane serine protease GlpG [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|420014480|ref|ZP_14528786.1| intramembrane serine protease GlpG [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|420019849|ref|ZP_14534040.1| intramembrane serine protease GlpG [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|420025500|ref|ZP_14539508.1| intramembrane serine protease GlpG [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|420037292|ref|ZP_14550947.1| intramembrane serine protease GlpG [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|420042873|ref|ZP_14556364.1| intramembrane serine protease GlpG [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|420048701|ref|ZP_14562013.1| intramembrane serine protease GlpG [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|420054506|ref|ZP_14567679.1| intramembrane serine protease GlpG [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|420059148|ref|ZP_14572157.1| intramembrane serine protease GlpG [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|420065739|ref|ZP_14578543.1| intramembrane serine protease GlpG [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|420070628|ref|ZP_14583279.1| intramembrane serine protease GlpG [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|420079009|ref|ZP_14591460.1| intramembrane serine protease GlpG [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|420082185|ref|ZP_14594485.1| intramembrane serine protease GlpG [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|421911937|ref|ZP_16341682.1| GlpG protein (membrane protein of glp regulon) [Klebsiella
pneumoniae subsp. pneumoniae ST258-K26BO]
gi|421914350|ref|ZP_16343999.1| GlpG protein (membrane protein of glp regulon) [Klebsiella
pneumoniae subsp. pneumoniae ST258-K28BO]
gi|424832761|ref|ZP_18257489.1| peptidase, S54 (rhomboid) family [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|428152069|ref|ZP_18999764.1| GlpG protein (membrane protein of glp regulon) [Klebsiella
pneumoniae subsp. pneumoniae ST512-K30BO]
gi|428933110|ref|ZP_19006671.1| intramembrane serine protease GlpG [Klebsiella pneumoniae JHCK1]
gi|428938828|ref|ZP_19011949.1| intramembrane serine protease GlpG [Klebsiella pneumoniae VA360]
gi|449046864|ref|ZP_21730649.1| intramembrane serine protease GlpG [Klebsiella pneumoniae hvKP1]
gi|172052445|sp|A6TF43.1|GLPG_KLEP7 RecName: Full=Rhomboid protease GlpG; AltName: Full=Intramembrane
serine protease
gi|150957147|gb|ABR79177.1| protein of glp regulon [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
gi|238549214|dbj|BAH65565.1| protein of glp regulon [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|259037467|gb|EEW38712.1| rhomboid protease GlpG [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|328538736|gb|EGF64823.1| rhomboid protease GlpG [Klebsiella sp. MS 92-3]
gi|339764054|gb|AEK00275.1| intramembrane serine protease GlpG [Klebsiella pneumoniae KCTC
2242]
gi|364520512|gb|AEW63640.1| intramembrane serine protease GlpG [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|397347607|gb|EJJ40713.1| intramembrane serine protease GlpG [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|397349929|gb|EJJ43020.1| intramembrane serine protease GlpG [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|397354217|gb|EJJ47279.1| intramembrane serine protease GlpG [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|397364682|gb|EJJ57311.1| intramembrane serine protease GlpG [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|397367124|gb|EJJ59737.1| intramembrane serine protease GlpG [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|397370973|gb|EJJ63527.1| intramembrane serine protease GlpG [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|397378016|gb|EJJ70235.1| intramembrane serine protease GlpG [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|397383166|gb|EJJ75314.1| intramembrane serine protease GlpG [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|397388640|gb|EJJ80608.1| intramembrane serine protease GlpG [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|397396949|gb|EJJ88631.1| intramembrane serine protease GlpG [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|397405584|gb|EJJ97040.1| intramembrane serine protease GlpG [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|397414664|gb|EJK05860.1| intramembrane serine protease GlpG [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|397415275|gb|EJK06461.1| intramembrane serine protease GlpG [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|397422899|gb|EJK13848.1| intramembrane serine protease GlpG [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|397431009|gb|EJK21692.1| intramembrane serine protease GlpG [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|397436015|gb|EJK26617.1| intramembrane serine protease GlpG [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|397441538|gb|EJK31911.1| intramembrane serine protease GlpG [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|397444127|gb|EJK34414.1| intramembrane serine protease GlpG [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|397452397|gb|EJK42467.1| intramembrane serine protease GlpG [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|402539577|gb|AFQ63726.1| GlpG protein (membrane protein of glp regulon) [Klebsiella
pneumoniae subsp. pneumoniae 1084]
gi|410114139|emb|CCM84307.1| GlpG protein (membrane protein of glp regulon) [Klebsiella
pneumoniae subsp. pneumoniae ST258-K26BO]
gi|410123498|emb|CCM86624.1| GlpG protein (membrane protein of glp regulon) [Klebsiella
pneumoniae subsp. pneumoniae ST258-K28BO]
gi|414710205|emb|CCN31909.1| peptidase, S54 (rhomboid) family [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|426305000|gb|EKV67131.1| intramembrane serine protease GlpG [Klebsiella pneumoniae VA360]
gi|426305960|gb|EKV68071.1| intramembrane serine protease GlpG [Klebsiella pneumoniae JHCK1]
gi|427537947|emb|CCM95902.1| GlpG protein (membrane protein of glp regulon) [Klebsiella
pneumoniae subsp. pneumoniae ST512-K30BO]
gi|448877617|gb|EMB12578.1| intramembrane serine protease GlpG [Klebsiella pneumoniae hvKP1]
Length = 276
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 49/87 (56%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
FT A++++C ++++ L G P +F+ +R+++ H SL+H+LFN+
Sbjct: 96 FTWAILLICIAVFILQNLLGDQPVMIWLAWPYDPSLQFEAWRYFSHAFMHFSLMHILFNL 155
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
L LG +E+ +GS ++ IT++ A
Sbjct: 156 LWWWYLGGAVEKRIGSGKLVVITVISA 182
>gi|189403678|ref|ZP_02784459.2| peptidase, S54 (rhomboid) family [Escherichia coli O157:H7 str.
EC4501]
gi|195934914|ref|ZP_03080296.1| intramembrane serine protease GlpG [Escherichia coli O157:H7 str.
EC4024]
gi|208821987|ref|ZP_03262307.1| peptidase, S54 (rhomboid) family [Escherichia coli O157:H7 str.
EC4042]
gi|217324284|ref|ZP_03440368.1| peptidase, S54 (rhomboid) family [Escherichia coli O157:H7 str.
TW14588]
gi|261224706|ref|ZP_05938987.1| predicted intramembrane serine protease [Escherichia coli O157:H7
str. FRIK2000]
gi|261254399|ref|ZP_05946932.1| predicted intramembrane serine protease [Escherichia coli O157:H7
str. FRIK966]
gi|416778049|ref|ZP_11875621.1| intramembrane serine protease GlpG [Escherichia coli O157:H7 str.
G5101]
gi|416789334|ref|ZP_11880465.1| intramembrane serine protease GlpG [Escherichia coli O157:H- str.
493-89]
gi|416832773|ref|ZP_11899936.1| intramembrane serine protease GlpG [Escherichia coli O157:H7 str.
LSU-61]
gi|419071602|ref|ZP_13617211.1| rhomboid family protein [Escherichia coli DEC3E]
gi|419077616|ref|ZP_13623118.1| rhomboid family protein [Escherichia coli DEC3F]
gi|419088479|ref|ZP_13633830.1| rhomboid family protein [Escherichia coli DEC4B]
gi|419100220|ref|ZP_13645409.1| rhomboid family protein [Escherichia coli DEC4D]
gi|419122661|ref|ZP_13667603.1| rhomboid family protein [Escherichia coli DEC5B]
gi|419138669|ref|ZP_13683459.1| rhomboid protease glpG [Escherichia coli DEC5E]
gi|420282809|ref|ZP_14785041.1| rhomboid protease glpG [Escherichia coli TW06591]
gi|420300406|ref|ZP_14802449.1| rhomboid protease glpG [Escherichia coli TW09109]
gi|421820186|ref|ZP_16255672.1| rhomboid family protease GlpG [Escherichia coli 10.0821]
gi|424552781|ref|ZP_17994617.1| rhomboid protease glpG [Escherichia coli EC4439]
gi|425158137|ref|ZP_18557393.1| rhomboid protease glpG [Escherichia coli PA34]
gi|425195366|ref|ZP_18592128.1| rhomboid protease glpG [Escherichia coli NE1487]
gi|425394516|ref|ZP_18777617.1| rhomboid protease glpG [Escherichia coli EC1868]
gi|425430717|ref|ZP_18811318.1| rhomboid protease glpG [Escherichia coli 0.1304]
gi|428949149|ref|ZP_19021416.1| rhomboid family protease GlpG [Escherichia coli 88.1467]
gi|429028621|ref|ZP_19094606.1| rhomboid family protease GlpG [Escherichia coli 96.0427]
gi|444998086|ref|ZP_21314580.1| rhomboid family protease GlpG [Escherichia coli PA13]
gi|445047253|ref|ZP_21362496.1| rhomboid family protease GlpG [Escherichia coli 3.4880]
gi|189369508|gb|EDU87924.1| peptidase, S54 (rhomboid) family [Escherichia coli O157:H7 str.
EC4501]
gi|208742110|gb|EDZ89792.1| peptidase, S54 (rhomboid) family [Escherichia coli O157:H7 str.
EC4042]
gi|217320505|gb|EEC28929.1| peptidase, S54 (rhomboid) family [Escherichia coli O157:H7 str.
TW14588]
gi|320639706|gb|EFX09300.1| intramembrane serine protease GlpG [Escherichia coli O157:H7 str.
G5101]
gi|320645205|gb|EFX14221.1| intramembrane serine protease GlpG [Escherichia coli O157:H- str.
493-89]
gi|320666515|gb|EFX33498.1| intramembrane serine protease GlpG [Escherichia coli O157:H7 str.
LSU-61]
gi|377908679|gb|EHU72890.1| rhomboid family protein [Escherichia coli DEC3E]
gi|377918489|gb|EHU82537.1| rhomboid family protein [Escherichia coli DEC3F]
gi|377927541|gb|EHU91456.1| rhomboid family protein [Escherichia coli DEC4B]
gi|377938447|gb|EHV02214.1| rhomboid family protein [Escherichia coli DEC4D]
gi|377962729|gb|EHV26181.1| rhomboid family protein [Escherichia coli DEC5B]
gi|377980793|gb|EHV44053.1| rhomboid protease glpG [Escherichia coli DEC5E]
gi|390779600|gb|EIO47314.1| rhomboid protease glpG [Escherichia coli TW06591]
gi|390804777|gb|EIO71725.1| rhomboid protease glpG [Escherichia coli TW09109]
gi|390876119|gb|EIP37114.1| rhomboid protease glpG [Escherichia coli EC4439]
gi|408067363|gb|EKH01805.1| rhomboid protease glpG [Escherichia coli PA34]
gi|408106365|gb|EKH38473.1| rhomboid protease glpG [Escherichia coli NE1487]
gi|408305041|gb|EKJ22449.1| rhomboid protease glpG [Escherichia coli EC1868]
gi|408343841|gb|EKJ58234.1| rhomboid protease glpG [Escherichia coli 0.1304]
gi|408610231|gb|EKK83605.1| rhomboid family protease GlpG [Escherichia coli 10.0821]
gi|427205909|gb|EKV76138.1| rhomboid family protease GlpG [Escherichia coli 88.1467]
gi|427277023|gb|EKW41582.1| rhomboid family protease GlpG [Escherichia coli 96.0427]
gi|444604194|gb|ELV78869.1| rhomboid family protease GlpG [Escherichia coli PA13]
gi|444657637|gb|ELW30106.1| rhomboid family protease GlpG [Escherichia coli 3.4880]
Length = 274
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T ++I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 95 TWVMMIACVVVFIAMQILGDQEVMLWLAWPFDPALKFEFWRYFTHALMHFSLMHILFNLL 154
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ ALL ++ Q G S
Sbjct: 155 WWWYLGGAVEKRLGSGKLIVIT-----------LISALLSGYVQ----QKFSGPWFGGLS 199
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 200 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFD-----LFGMSMANGA--- 251
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 252 HIAGLAVGLAMAF 264
>gi|1293533|gb|AAC28166.1| the translation start site has been verified [Escherichia coli]
Length = 276
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T ++I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 97 TWVMMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLL 156
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ ALL ++ Q G S
Sbjct: 157 WWWYLGGAVEKRLGSGKLIVIT-----------LISALLSGYVQ----QKFSGPWFGGLS 201
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 202 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFD-----LFGMSMANGA--- 253
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 254 HIAGLAVGLAMAF 266
>gi|403060361|ref|YP_006648578.1| intramembrane serine protease GlpG [Pectobacterium carotovorum
subsp. carotovorum PCC21]
gi|402807687|gb|AFR05325.1| intramembrane serine protease GlpG [Pectobacterium carotovorum
subsp. carotovorum PCC21]
Length = 277
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
T ++++V ++++ + GY+S P A + +V+R+++ ++ H SLLH+LFN+
Sbjct: 98 LTLSLMVVTIAVFILMQISGYESVMVWLAFP-AEGQQIEVWRWFSHVLLHFSLLHILFNL 156
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
+ LG +E+++G+ ++ IT++ A
Sbjct: 157 MWWWYLGGPVEKVLGTGKLLVITLVSA 183
>gi|218550681|ref|YP_002384472.1| intramembrane serine protease GlpG [Escherichia fergusonii ATCC
35469]
gi|226729481|sp|B7LSC6.1|GLPG_ESCF3 RecName: Full=Rhomboid protease GlpG; AltName: Full=Intramembrane
serine protease
gi|218358222|emb|CAQ90869.1| putative intramembrane serine protease [Escherichia fergusonii ATCC
35469]
Length = 276
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T ++I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 97 TWVMMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLL 156
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ ALL ++ Q G S
Sbjct: 157 WWWYLGGAVEKRLGSGKLIVIT-----------LISALLSGYVQ----QKFSGPWFGGLS 201
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 202 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFD-----LFGMSMANGA--- 253
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 254 HIAGLAVGLAMAF 266
>gi|419420506|ref|ZP_13960735.1| membrane spanning protein [Propionibacterium acnes PRP-38]
gi|379978880|gb|EIA12204.1| membrane spanning protein [Propionibacterium acnes PRP-38]
Length = 302
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 70/145 (48%), Gaps = 10/145 (6%)
Query: 63 QVYRFYTSIVFHG-SLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLI 121
+ +RF TS+ H S+ H+ FNM AL LG LE +G R ++ L L+
Sbjct: 125 EPWRFVTSMFGHALSIFHIGFNMYALWALGRSLEPFLGRARFLAAYLMSGLGGGALFCLM 184
Query: 122 ALLVAHIPFYRLQNVMDECAIGFSGVIFS----LIVIETSLSGAQSRSVFGLFNIPAKWY 177
A A L NV D+ +G SG IF L++++ L GA +R ++ + I A
Sbjct: 185 A--TADGGRAILPNV-DDGVVGASGAIFGLFGVLLIVQRRL-GASTRELWVVLAINAALL 240
Query: 178 PLILLVLFQVLMTNVSLLGHLCGIL 202
I + +Q + L+G +CG++
Sbjct: 241 LFISGIAWQAHLGGF-LVGMMCGVI 264
>gi|218691699|ref|YP_002399911.1| intramembrane serine protease GlpG [Escherichia coli ED1a]
gi|254798883|sp|B7N156.1|GLPG_ECO81 RecName: Full=Rhomboid protease GlpG; AltName: Full=Intramembrane
serine protease
gi|218429263|emb|CAR10074.1| putative intramembrane serine protease [Escherichia coli ED1a]
Length = 276
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T ++I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 97 TWVMMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLL 156
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ ALL ++ Q G S
Sbjct: 157 WWWYLGGAVEKRLGSGKLIVIT-----------LISALLSGYVQ----QKFSGPWFGGLS 201
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 202 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFD-----LFGMSMANGA--- 253
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 254 HIAGLAVGLAMAF 266
>gi|172045907|sp|Q6CZL3.2|GLPG_ERWCT RecName: Full=Rhomboid protease GlpG; AltName: Full=Intramembrane
serine protease
Length = 276
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 88/185 (47%), Gaps = 23/185 (12%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
T +V++V ++++ + GY+S P A + Q++R+++ + H SLLH+LFN+
Sbjct: 97 LTLSVMVVTIAVFILMQISGYESVMTWLAFP-AEGQQLQLWRWFSHALLHFSLLHILFNL 155
Query: 85 LALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGF 144
+ LG +E+++G+ ++ L+IAL+ A + + G
Sbjct: 156 MWWWYLGGPVEKVLGTGKL---------------LVIALVSALVSGWAQSWCSGTYFGGL 200
Query: 145 SGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVL----FQVLMTNVSLLGHLCG 200
SGV+++L+ L G R G ++P LL L F +L +++ H+ G
Sbjct: 201 SGVVYALMGY-VWLRG--EREPDGYLSMPRSLMAFALLWLVAGYFDILGMSIANAAHVAG 257
Query: 201 ILSGF 205
++ G
Sbjct: 258 LIVGL 262
>gi|417710161|ref|ZP_12359175.1| rhomboid family protein [Shigella flexneri VA-6]
gi|417715120|ref|ZP_12364064.1| rhomboid family protein [Shigella flexneri K-272]
gi|417720075|ref|ZP_12368950.1| rhomboid family protein [Shigella flexneri K-227]
gi|417830487|ref|ZP_12477023.1| rhomboid family protein [Shigella flexneri J1713]
gi|172045687|sp|Q0SZP2.2|GLPG_SHIF8 RecName: Full=Rhomboid protease GlpG; AltName: Full=Intramembrane
serine protease
gi|332996387|gb|EGK16014.1| rhomboid family protein [Shigella flexneri VA-6]
gi|332996625|gb|EGK16250.1| rhomboid family protein [Shigella flexneri K-272]
gi|333013034|gb|EGK32410.1| rhomboid family protein [Shigella flexneri K-227]
gi|335573142|gb|EGM59505.1| rhomboid family protein [Shigella flexneri J1713]
Length = 276
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T ++I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 97 TWVMMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLL 156
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ ALL ++ Q G S
Sbjct: 157 WWWYLGGAVEKRLGSGKLIVIT-----------LISALLSGYVQ----QKFSGPWFGGLS 201
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 202 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFD-----LFGMSMANGA--- 253
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 254 HIAGLAVGLAMAF 266
>gi|432949599|ref|ZP_20144380.1| rhomboid protease glpG [Escherichia coli KTE196]
gi|433044938|ref|ZP_20232423.1| rhomboid protease glpG [Escherichia coli KTE117]
gi|431454146|gb|ELH34524.1| rhomboid protease glpG [Escherichia coli KTE196]
gi|431553680|gb|ELI27605.1| rhomboid protease glpG [Escherichia coli KTE117]
Length = 276
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T ++I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 97 TWVMMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLL 156
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ ALL ++ Q G S
Sbjct: 157 WWWYLGGAVEKRLGSGKLIVIT-----------LISALLSGYVQ----QKFSGPWFGGLS 201
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 202 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFD-----LFGMSMANGA--- 253
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 254 HIAGLAVGLAMAF 266
>gi|420334129|ref|ZP_14835757.1| rhomboid protease glpG [Shigella flexneri K-1770]
gi|391243174|gb|EIQ02470.1| rhomboid protease glpG [Shigella flexneri K-1770]
Length = 274
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T ++I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 95 TWVMMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLL 154
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ ALL ++ Q G S
Sbjct: 155 WWWYLGGAVEKRLGSGKLIVIT-----------LISALLSGYVQ----QKFSGPWFGGLS 199
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 200 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFD-----LFGMSMANGA--- 251
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 252 HIAGLAVGLAMAF 264
>gi|374316397|ref|YP_005062825.1| hypothetical protein [Sphaerochaeta pleomorpha str. Grapes]
gi|359352041|gb|AEV29815.1| putative membrane protein [Sphaerochaeta pleomorpha str. Grapes]
Length = 213
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 90/191 (47%), Gaps = 22/191 (11%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T ++I+ ++L+ S Y + +PS V+ + +++F+T + HG H+ FNML
Sbjct: 21 TLKLIIINAVVFLLTTYIAPRSAYYLAMIPSFVLHGY-IWQFFTYMFVHGGFSHIFFNML 79
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
+L G+ +E+ +GS +L + I+ L L NV+ +G S
Sbjct: 80 SLFIFGTMVEQRVGSKEFLLFYLLTGIVSGIISFLCYLAAG-------TNVI---LVGAS 129
Query: 146 GVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMT-------NVSLLGHL 198
G I+ ++++ VFGL IP + L++L F L + NV+ L HL
Sbjct: 130 GAIYGVLLMFAVFYPYARVFVFGL--IPIRAPVLVVLYAFIELSSQVFGAGGNVAHLTHL 187
Query: 199 CGILSGFAYTY 209
G+L FAY Y
Sbjct: 188 SGLL--FAYLY 196
>gi|15803931|ref|NP_289967.1| intramembrane serine protease GlpG [Escherichia coli O157:H7 str.
EDL933]
gi|15833521|ref|NP_312294.1| intramembrane serine protease GlpG [Escherichia coli O157:H7 str.
Sakai]
gi|74314024|ref|YP_312443.1| intramembrane serine protease GlpG [Shigella sonnei Ss046]
gi|82778761|ref|YP_405110.1| intramembrane serine protease GlpG [Shigella dysenteriae Sd197]
gi|168753180|ref|ZP_02778187.1| peptidase, S54 (rhomboid) family [Escherichia coli O157:H7 str.
EC4401]
gi|168779511|ref|ZP_02804518.1| peptidase, S54 (rhomboid) family [Escherichia coli O157:H7 str.
EC4076]
gi|168785232|ref|ZP_02810239.1| peptidase, S54 (rhomboid) family [Escherichia coli O157:H7 str.
EC869]
gi|168797198|ref|ZP_02822205.1| peptidase, S54 (rhomboid) family [Escherichia coli O157:H7 str.
EC508]
gi|187775654|ref|ZP_02797687.2| peptidase, S54 (rhomboid) family [Escherichia coli O157:H7 str.
EC4196]
gi|188024498|ref|ZP_02772117.2| peptidase, S54 (rhomboid) family [Escherichia coli O157:H7 str.
EC4113]
gi|189402769|ref|ZP_02790782.2| peptidase, S54 (rhomboid) family [Escherichia coli O157:H7 str.
EC4486]
gi|208806161|ref|ZP_03248498.1| peptidase, S54 (rhomboid) family [Escherichia coli O157:H7 str.
EC4206]
gi|208814554|ref|ZP_03255883.1| peptidase, S54 (rhomboid) family [Escherichia coli O157:H7 str.
EC4045]
gi|209397686|ref|YP_002272861.1| intramembrane serine protease GlpG [Escherichia coli O157:H7 str.
EC4115]
gi|254795341|ref|YP_003080178.1| intramembrane serine protease GlpG [Escherichia coli O157:H7 str.
TW14359]
gi|291284762|ref|YP_003501580.1| Rhomboid protease glpG [Escherichia coli O55:H7 str. CB9615]
gi|383180592|ref|YP_005458597.1| intramembrane serine protease GlpG [Shigella sonnei 53G]
gi|387508793|ref|YP_006161049.1| intramembrane serine protease GlpG [Escherichia coli O55:H7 str.
RM12579]
gi|387884573|ref|YP_006314875.1| intramembrane serine protease GlpG [Escherichia coli Xuzhou21]
gi|414578204|ref|ZP_11435375.1| rhomboid protease glpG [Shigella sonnei 3233-85]
gi|415851313|ref|ZP_11528062.1| rhomboid family protein [Shigella sonnei 53G]
gi|416315950|ref|ZP_11659763.1| intramembrane serine protease GlpG [Escherichia coli O157:H7 str.
1044]
gi|416320207|ref|ZP_11662759.1| intramembrane serine protease GlpG [Escherichia coli O157:H7 str.
EC1212]
gi|416326547|ref|ZP_11666756.1| intramembrane serine protease GlpG [Escherichia coli O157:H7 str.
1125]
gi|416801197|ref|ZP_11885370.1| intramembrane serine protease GlpG [Escherichia coli O157:H- str. H
2687]
gi|416812151|ref|ZP_11890320.1| intramembrane serine protease GlpG [Escherichia coli O55:H7 str.
3256-97]
gi|416822402|ref|ZP_11894838.1| intramembrane serine protease GlpG [Escherichia coli O55:H7 str.
USDA 5905]
gi|417630809|ref|ZP_12281043.1| rhomboid family protein [Escherichia coli STEC_MHI813]
gi|418268892|ref|ZP_12887561.1| rhomboid family protein [Shigella sonnei str. Moseley]
gi|419047562|ref|ZP_13594494.1| rhomboid family protein [Escherichia coli DEC3A]
gi|419053175|ref|ZP_13600042.1| rhomboid family protein [Escherichia coli DEC3B]
gi|419059128|ref|ZP_13605929.1| rhomboid family protein [Escherichia coli DEC3C]
gi|419064675|ref|ZP_13611395.1| rhomboid family protein [Escherichia coli DEC3D]
gi|419082606|ref|ZP_13628051.1| rhomboid family protein [Escherichia coli DEC4A]
gi|419094395|ref|ZP_13639674.1| rhomboid family protein [Escherichia coli DEC4C]
gi|419106023|ref|ZP_13651146.1| rhomboid family protein [Escherichia coli DEC4E]
gi|419111404|ref|ZP_13656455.1| rhomboid family protein [Escherichia coli DEC4F]
gi|419128027|ref|ZP_13672901.1| rhomboid family protein [Escherichia coli DEC5C]
gi|419133513|ref|ZP_13678340.1| rhomboid family protein [Escherichia coli DEC5D]
gi|420271930|ref|ZP_14774281.1| rhomboid protease glpG [Escherichia coli PA22]
gi|420277442|ref|ZP_14779722.1| rhomboid protease glpG [Escherichia coli PA40]
gi|420288793|ref|ZP_14790975.1| rhomboid protease glpG [Escherichia coli TW10246]
gi|420294553|ref|ZP_14796664.1| rhomboid protease glpG [Escherichia coli TW11039]
gi|420306284|ref|ZP_14808272.1| rhomboid protease glpG [Escherichia coli TW10119]
gi|420311607|ref|ZP_14813535.1| rhomboid protease glpG [Escherichia coli EC1738]
gi|420317335|ref|ZP_14819207.1| rhomboid protease glpG [Escherichia coli EC1734]
gi|420360773|ref|ZP_14861727.1| rhomboid protease glpG [Shigella sonnei 3226-85]
gi|420365562|ref|ZP_14866426.1| rhomboid family protein [Shigella sonnei 4822-66]
gi|421814353|ref|ZP_16250057.1| rhomboid family protease GlpG [Escherichia coli 8.0416]
gi|421826245|ref|ZP_16261598.1| rhomboid protease glpG [Escherichia coli FRIK920]
gi|421832994|ref|ZP_16268274.1| rhomboid protease glpG [Escherichia coli PA7]
gi|422833836|ref|ZP_16881901.1| rhomboid protease glpG [Escherichia coli E101]
gi|423727370|ref|ZP_17701275.1| rhomboid protease glpG [Escherichia coli PA31]
gi|424079568|ref|ZP_17816532.1| rhomboid protease glpG [Escherichia coli FDA505]
gi|424086026|ref|ZP_17822509.1| rhomboid protease glpG [Escherichia coli FDA517]
gi|424092426|ref|ZP_17828352.1| rhomboid protease glpG [Escherichia coli FRIK1996]
gi|424105310|ref|ZP_17840049.1| rhomboid protease glpG [Escherichia coli FRIK1990]
gi|424111956|ref|ZP_17846182.1| rhomboid protease glpG [Escherichia coli 93-001]
gi|424117897|ref|ZP_17851726.1| rhomboid protease glpG [Escherichia coli PA3]
gi|424124083|ref|ZP_17857386.1| rhomboid protease glpG [Escherichia coli PA5]
gi|424130232|ref|ZP_17863131.1| rhomboid protease glpG [Escherichia coli PA9]
gi|424136554|ref|ZP_17868998.1| rhomboid protease glpG [Escherichia coli PA10]
gi|424143107|ref|ZP_17874970.1| rhomboid protease glpG [Escherichia coli PA14]
gi|424149509|ref|ZP_17880876.1| rhomboid protease glpG [Escherichia coli PA15]
gi|424155357|ref|ZP_17886285.1| rhomboid protease glpG [Escherichia coli PA24]
gi|424255344|ref|ZP_17891833.1| rhomboid protease glpG [Escherichia coli PA25]
gi|424333832|ref|ZP_17897741.1| rhomboid protease glpG [Escherichia coli PA28]
gi|424451795|ref|ZP_17903460.1| rhomboid protease glpG [Escherichia coli PA32]
gi|424457983|ref|ZP_17909089.1| rhomboid protease glpG [Escherichia coli PA33]
gi|424464448|ref|ZP_17914814.1| rhomboid protease glpG [Escherichia coli PA39]
gi|424470746|ref|ZP_17920553.1| rhomboid protease glpG [Escherichia coli PA41]
gi|424477249|ref|ZP_17926559.1| rhomboid protease glpG [Escherichia coli PA42]
gi|424483013|ref|ZP_17931985.1| rhomboid protease glpG [Escherichia coli TW07945]
gi|424489195|ref|ZP_17937737.1| rhomboid protease glpG [Escherichia coli TW09098]
gi|424495866|ref|ZP_17943467.1| rhomboid protease glpG [Escherichia coli TW09195]
gi|424502545|ref|ZP_17949427.1| rhomboid protease glpG [Escherichia coli EC4203]
gi|424508799|ref|ZP_17955176.1| rhomboid protease glpG [Escherichia coli EC4196]
gi|424516153|ref|ZP_17960780.1| rhomboid protease glpG [Escherichia coli TW14313]
gi|424522349|ref|ZP_17966457.1| rhomboid protease glpG [Escherichia coli TW14301]
gi|424528227|ref|ZP_17971935.1| rhomboid protease glpG [Escherichia coli EC4421]
gi|424534374|ref|ZP_17977714.1| rhomboid protease glpG [Escherichia coli EC4422]
gi|424540427|ref|ZP_17983363.1| rhomboid protease glpG [Escherichia coli EC4013]
gi|424546559|ref|ZP_17988922.1| rhomboid protease glpG [Escherichia coli EC4402]
gi|424558967|ref|ZP_18000369.1| rhomboid protease glpG [Escherichia coli EC4436]
gi|424565305|ref|ZP_18006301.1| rhomboid protease glpG [Escherichia coli EC4437]
gi|424571436|ref|ZP_18011976.1| rhomboid protease glpG [Escherichia coli EC4448]
gi|424577590|ref|ZP_18017635.1| rhomboid protease glpG [Escherichia coli EC1845]
gi|424583409|ref|ZP_18023048.1| rhomboid protease glpG [Escherichia coli EC1863]
gi|425100083|ref|ZP_18502807.1| rhomboid family protease GlpG [Escherichia coli 3.4870]
gi|425106181|ref|ZP_18508490.1| rhomboid family protease GlpG [Escherichia coli 5.2239]
gi|425112191|ref|ZP_18514104.1| rhomboid family protease GlpG [Escherichia coli 6.0172]
gi|425128116|ref|ZP_18529276.1| rhomboid family protease GlpG [Escherichia coli 8.0586]
gi|425133859|ref|ZP_18534701.1| rhomboid family protease GlpG [Escherichia coli 8.2524]
gi|425140435|ref|ZP_18540808.1| rhomboid family protease GlpG [Escherichia coli 10.0833]
gi|425146142|ref|ZP_18546127.1| rhomboid family protease GlpG [Escherichia coli 10.0869]
gi|425152262|ref|ZP_18551868.1| rhomboid family protease GlpG [Escherichia coli 88.0221]
gi|425164485|ref|ZP_18563364.1| rhomboid protease glpG [Escherichia coli FDA506]
gi|425170230|ref|ZP_18568695.1| rhomboid protease glpG [Escherichia coli FDA507]
gi|425176289|ref|ZP_18574400.1| rhomboid protease glpG [Escherichia coli FDA504]
gi|425182334|ref|ZP_18580020.1| rhomboid protease glpG [Escherichia coli FRIK1999]
gi|425188599|ref|ZP_18585863.1| rhomboid protease glpG [Escherichia coli FRIK1997]
gi|425201843|ref|ZP_18598042.1| rhomboid protease glpG [Escherichia coli NE037]
gi|425208226|ref|ZP_18604014.1| rhomboid protease glpG [Escherichia coli FRIK2001]
gi|425213981|ref|ZP_18609373.1| rhomboid family protease GlpG [Escherichia coli PA4]
gi|425220103|ref|ZP_18615057.1| rhomboid protease glpG [Escherichia coli PA23]
gi|425226652|ref|ZP_18621110.1| rhomboid protease glpG [Escherichia coli PA49]
gi|425232906|ref|ZP_18626938.1| rhomboid protease glpG [Escherichia coli PA45]
gi|425238831|ref|ZP_18632542.1| rhomboid protease glpG [Escherichia coli TT12B]
gi|425245069|ref|ZP_18638367.1| rhomboid protease glpG [Escherichia coli MA6]
gi|425251255|ref|ZP_18644191.1| rhomboid protease glpG [Escherichia coli 5905]
gi|425257042|ref|ZP_18649546.1| rhomboid protease glpG [Escherichia coli CB7326]
gi|425263296|ref|ZP_18655289.1| rhomboid protease glpG [Escherichia coli EC96038]
gi|425269295|ref|ZP_18660918.1| rhomboid protease glpG [Escherichia coli 5412]
gi|425296747|ref|ZP_18686907.1| rhomboid protease glpG [Escherichia coli PA38]
gi|425313439|ref|ZP_18702610.1| rhomboid protease glpG [Escherichia coli EC1735]
gi|425319416|ref|ZP_18708196.1| rhomboid protease glpG [Escherichia coli EC1736]
gi|425325518|ref|ZP_18713865.1| rhomboid protease glpG [Escherichia coli EC1737]
gi|425331883|ref|ZP_18719711.1| rhomboid protease glpG [Escherichia coli EC1846]
gi|425338060|ref|ZP_18725408.1| rhomboid protease glpG [Escherichia coli EC1847]
gi|425344373|ref|ZP_18731255.1| rhomboid protease glpG [Escherichia coli EC1848]
gi|425350173|ref|ZP_18736632.1| rhomboid protease glpG [Escherichia coli EC1849]
gi|425356481|ref|ZP_18742540.1| rhomboid protease glpG [Escherichia coli EC1850]
gi|425362443|ref|ZP_18748081.1| rhomboid protease glpG [Escherichia coli EC1856]
gi|425368658|ref|ZP_18753773.1| rhomboid protease glpG [Escherichia coli EC1862]
gi|425374976|ref|ZP_18759609.1| rhomboid protease glpG [Escherichia coli EC1864]
gi|425387863|ref|ZP_18771414.1| rhomboid protease glpG [Escherichia coli EC1866]
gi|425400654|ref|ZP_18783351.1| rhomboid protease glpG [Escherichia coli EC1869]
gi|425406744|ref|ZP_18788958.1| rhomboid protease glpG [Escherichia coli EC1870]
gi|425413128|ref|ZP_18794883.1| rhomboid protease glpG [Escherichia coli NE098]
gi|425419440|ref|ZP_18800702.1| rhomboid protease glpG [Escherichia coli FRIK523]
gi|428955221|ref|ZP_19027008.1| rhomboid family protease GlpG [Escherichia coli 88.1042]
gi|428961175|ref|ZP_19032463.1| rhomboid family protease GlpG [Escherichia coli 89.0511]
gi|428967829|ref|ZP_19038533.1| rhomboid family protease GlpG [Escherichia coli 90.0091]
gi|428973593|ref|ZP_19043909.1| rhomboid family protease GlpG [Escherichia coli 90.0039]
gi|428980033|ref|ZP_19049841.1| rhomboid family protease GlpG [Escherichia coli 90.2281]
gi|428985802|ref|ZP_19055186.1| rhomboid family protease GlpG [Escherichia coli 93.0055]
gi|428991940|ref|ZP_19060920.1| rhomboid family protease GlpG [Escherichia coli 93.0056]
gi|428997829|ref|ZP_19066415.1| rhomboid family protease GlpG [Escherichia coli 94.0618]
gi|429004107|ref|ZP_19072196.1| rhomboid family protease GlpG [Escherichia coli 95.0183]
gi|429010163|ref|ZP_19077611.1| rhomboid family protease GlpG [Escherichia coli 95.1288]
gi|429016717|ref|ZP_19083591.1| rhomboid family protease GlpG [Escherichia coli 95.0943]
gi|429022549|ref|ZP_19089062.1| rhomboid family protease GlpG [Escherichia coli 96.0428]
gi|429034789|ref|ZP_19100304.1| rhomboid family protease GlpG [Escherichia coli 96.0939]
gi|429040877|ref|ZP_19105970.1| rhomboid family protease GlpG [Escherichia coli 96.0932]
gi|429046699|ref|ZP_19111404.1| rhomboid family protease GlpG [Escherichia coli 96.0107]
gi|429052097|ref|ZP_19116658.1| rhomboid family protease GlpG [Escherichia coli 97.0003]
gi|429057603|ref|ZP_19121878.1| rhomboid family protease GlpG [Escherichia coli 97.1742]
gi|429063103|ref|ZP_19127083.1| rhomboid family protease GlpG [Escherichia coli 97.0007]
gi|429069332|ref|ZP_19132780.1| rhomboid family protease GlpG [Escherichia coli 99.0672]
gi|429075227|ref|ZP_19138473.1| rhomboid family protease GlpG [Escherichia coli 99.0678]
gi|429080437|ref|ZP_19143566.1| rhomboid family protease GlpG [Escherichia coli 99.0713]
gi|429828521|ref|ZP_19359534.1| rhomboid family protease GlpG [Escherichia coli 96.0109]
gi|429834956|ref|ZP_19365251.1| rhomboid family protease GlpG [Escherichia coli 97.0010]
gi|432451639|ref|ZP_19693896.1| rhomboid protease glpG [Escherichia coli KTE193]
gi|433035289|ref|ZP_20222986.1| rhomboid protease glpG [Escherichia coli KTE112]
gi|444927035|ref|ZP_21246304.1| rhomboid family protease GlpG [Escherichia coli 09BKT078844]
gi|444932672|ref|ZP_21251691.1| rhomboid family protease GlpG [Escherichia coli 99.0814]
gi|444938110|ref|ZP_21256863.1| rhomboid family protease GlpG [Escherichia coli 99.0815]
gi|444943722|ref|ZP_21262221.1| rhomboid family protease GlpG [Escherichia coli 99.0816]
gi|444949202|ref|ZP_21267500.1| rhomboid family protease GlpG [Escherichia coli 99.0839]
gi|444954861|ref|ZP_21272935.1| rhomboid family protease GlpG [Escherichia coli 99.0848]
gi|444960275|ref|ZP_21278107.1| rhomboid family protease GlpG [Escherichia coli 99.1753]
gi|444965517|ref|ZP_21283091.1| rhomboid family protease GlpG [Escherichia coli 99.1775]
gi|444971459|ref|ZP_21288804.1| rhomboid family protease GlpG [Escherichia coli 99.1793]
gi|444976753|ref|ZP_21293849.1| rhomboid family protease GlpG [Escherichia coli 99.1805]
gi|444982134|ref|ZP_21299036.1| rhomboid family protease GlpG [Escherichia coli ATCC 700728]
gi|444987633|ref|ZP_21304404.1| rhomboid family protease GlpG [Escherichia coli PA11]
gi|444992850|ref|ZP_21309487.1| rhomboid family protease GlpG [Escherichia coli PA19]
gi|445003718|ref|ZP_21320101.1| rhomboid family protease GlpG [Escherichia coli PA2]
gi|445009090|ref|ZP_21325324.1| rhomboid family protease GlpG [Escherichia coli PA47]
gi|445014222|ref|ZP_21330321.1| rhomboid family protease GlpG [Escherichia coli PA48]
gi|445020132|ref|ZP_21336092.1| rhomboid family protease GlpG [Escherichia coli PA8]
gi|445025505|ref|ZP_21341322.1| rhomboid family protease GlpG [Escherichia coli 7.1982]
gi|445030963|ref|ZP_21346626.1| rhomboid family protease GlpG [Escherichia coli 99.1781]
gi|445036363|ref|ZP_21351885.1| rhomboid family protease GlpG [Escherichia coli 99.1762]
gi|445041983|ref|ZP_21357349.1| rhomboid family protease GlpG [Escherichia coli PA35]
gi|445052787|ref|ZP_21367806.1| rhomboid family protease GlpG [Escherichia coli 95.0083]
gi|445060790|ref|ZP_21373309.1| rhomboid family protease GlpG [Escherichia coli 99.0670]
gi|452968608|ref|ZP_21966835.1| intramembrane serine protease GlpG [Escherichia coli O157:H7 str.
EC4009]
gi|81764752|sp|Q8X6Z6.1|GLPG_ECO57 RecName: Full=Rhomboid protease GlpG; AltName: Full=Intramembrane
serine protease
gi|123561354|sp|Q32AN6.1|GLPG_SHIDS RecName: Full=Rhomboid protease GlpG; AltName: Full=Intramembrane
serine protease
gi|123615899|sp|Q3YWA4.1|GLPG_SHISS RecName: Full=Rhomboid protease GlpG; AltName: Full=Intramembrane
serine protease
gi|226729474|sp|B5YTX6.1|GLPG_ECO5E RecName: Full=Rhomboid protease GlpG; AltName: Full=Intramembrane
serine protease
gi|12518063|gb|AAG58528.1|AE005565_3 protein of glp regulon [Escherichia coli O157:H7 str. EDL933]
gi|13363741|dbj|BAB37690.1| protein of glp regulon [Escherichia coli O157:H7 str. Sakai]
gi|73857501|gb|AAZ90208.1| protein of glp regulon [Shigella sonnei Ss046]
gi|81242909|gb|ABB63619.1| protein of glp regulon [Shigella dysenteriae Sd197]
gi|187771422|gb|EDU35266.1| peptidase, S54 (rhomboid) family [Escherichia coli O157:H7 str.
EC4196]
gi|188018326|gb|EDU56448.1| peptidase, S54 (rhomboid) family [Escherichia coli O157:H7 str.
EC4113]
gi|189002278|gb|EDU71264.1| peptidase, S54 (rhomboid) family [Escherichia coli O157:H7 str.
EC4076]
gi|189359206|gb|EDU77625.1| peptidase, S54 (rhomboid) family [Escherichia coli O157:H7 str.
EC4401]
gi|189364732|gb|EDU83151.1| peptidase, S54 (rhomboid) family [Escherichia coli O157:H7 str.
EC4486]
gi|189374373|gb|EDU92789.1| peptidase, S54 (rhomboid) family [Escherichia coli O157:H7 str.
EC869]
gi|189379970|gb|EDU98386.1| peptidase, S54 (rhomboid) family [Escherichia coli O157:H7 str.
EC508]
gi|208725962|gb|EDZ75563.1| peptidase, S54 (rhomboid) family [Escherichia coli O157:H7 str.
EC4206]
gi|208735831|gb|EDZ84518.1| peptidase, S54 (rhomboid) family [Escherichia coli O157:H7 str.
EC4045]
gi|209159086|gb|ACI36519.1| peptidase, S54 (rhomboid) family [Escherichia coli O157:H7 str.
EC4115]
gi|209756338|gb|ACI76481.1| protein of glp regulon [Escherichia coli]
gi|209756340|gb|ACI76482.1| protein of glp regulon [Escherichia coli]
gi|209756342|gb|ACI76483.1| protein of glp regulon [Escherichia coli]
gi|209756344|gb|ACI76484.1| protein of glp regulon [Escherichia coli]
gi|209756346|gb|ACI76485.1| protein of glp regulon [Escherichia coli]
gi|254594741|gb|ACT74102.1| predicted intramembrane serine protease [Escherichia coli O157:H7
str. TW14359]
gi|290764635|gb|ADD58596.1| Rhomboid protease glpG [Escherichia coli O55:H7 str. CB9615]
gi|320191563|gb|EFW66213.1| intramembrane serine protease GlpG [Escherichia coli O157:H7 str.
EC1212]
gi|320650516|gb|EFX18982.1| intramembrane serine protease GlpG [Escherichia coli O157:H- str. H
2687]
gi|320655708|gb|EFX23631.1| intramembrane serine protease GlpG [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320661492|gb|EFX28907.1| intramembrane serine protease GlpG [Escherichia coli O55:H7 str.
USDA 5905]
gi|323164990|gb|EFZ50781.1| rhomboid family protein [Shigella sonnei 53G]
gi|326337611|gb|EGD61446.1| intramembrane serine protease GlpG [Escherichia coli O157:H7 str.
1044]
gi|326344638|gb|EGD68387.1| intramembrane serine protease GlpG [Escherichia coli O157:H7 str.
1125]
gi|345370088|gb|EGX02066.1| rhomboid family protein [Escherichia coli STEC_MHI813]
gi|371604459|gb|EHN93087.1| rhomboid protease glpG [Escherichia coli E101]
gi|374360787|gb|AEZ42494.1| intramembrane serine protease GlpG [Escherichia coli O55:H7 str.
RM12579]
gi|377890270|gb|EHU54728.1| rhomboid family protein [Escherichia coli DEC3A]
gi|377892022|gb|EHU56474.1| rhomboid family protein [Escherichia coli DEC3B]
gi|377903057|gb|EHU67355.1| rhomboid family protein [Escherichia coli DEC3C]
gi|377907173|gb|EHU71409.1| rhomboid family protein [Escherichia coli DEC3D]
gi|377924044|gb|EHU88000.1| rhomboid family protein [Escherichia coli DEC4A]
gi|377939466|gb|EHV03221.1| rhomboid family protein [Escherichia coli DEC4C]
gi|377945059|gb|EHV08757.1| rhomboid family protein [Escherichia coli DEC4E]
gi|377954427|gb|EHV17986.1| rhomboid family protein [Escherichia coli DEC4F]
gi|377970765|gb|EHV34123.1| rhomboid family protein [Escherichia coli DEC5C]
gi|377972236|gb|EHV35586.1| rhomboid family protein [Escherichia coli DEC5D]
gi|386798031|gb|AFJ31065.1| intramembrane serine protease GlpG [Escherichia coli Xuzhou21]
gi|390638623|gb|EIN18126.1| rhomboid protease glpG [Escherichia coli FRIK1996]
gi|390640100|gb|EIN19565.1| rhomboid protease glpG [Escherichia coli FDA517]
gi|390640431|gb|EIN19890.1| rhomboid protease glpG [Escherichia coli FDA505]
gi|390657980|gb|EIN35787.1| rhomboid protease glpG [Escherichia coli 93-001]
gi|390661158|gb|EIN38829.1| rhomboid protease glpG [Escherichia coli FRIK1990]
gi|390675042|gb|EIN51206.1| rhomboid protease glpG [Escherichia coli PA3]
gi|390678514|gb|EIN54476.1| rhomboid protease glpG [Escherichia coli PA5]
gi|390681860|gb|EIN57644.1| rhomboid protease glpG [Escherichia coli PA9]
gi|390693512|gb|EIN68145.1| rhomboid protease glpG [Escherichia coli PA10]
gi|390697946|gb|EIN72343.1| rhomboid protease glpG [Escherichia coli PA14]
gi|390698497|gb|EIN72876.1| rhomboid protease glpG [Escherichia coli PA15]
gi|390712388|gb|EIN85345.1| rhomboid protease glpG [Escherichia coli PA22]
gi|390719271|gb|EIN92005.1| rhomboid protease glpG [Escherichia coli PA25]
gi|390720756|gb|EIN93462.1| rhomboid protease glpG [Escherichia coli PA24]
gi|390725252|gb|EIN97772.1| rhomboid protease glpG [Escherichia coli PA28]
gi|390738788|gb|EIO09992.1| rhomboid protease glpG [Escherichia coli PA31]
gi|390739486|gb|EIO10663.1| rhomboid protease glpG [Escherichia coli PA32]
gi|390742697|gb|EIO13693.1| rhomboid protease glpG [Escherichia coli PA33]
gi|390756317|gb|EIO25828.1| rhomboid protease glpG [Escherichia coli PA40]
gi|390762924|gb|EIO32177.1| rhomboid protease glpG [Escherichia coli PA39]
gi|390764512|gb|EIO33720.1| rhomboid protease glpG [Escherichia coli PA41]
gi|390766169|gb|EIO35302.1| rhomboid protease glpG [Escherichia coli PA42]
gi|390787064|gb|EIO54562.1| rhomboid protease glpG [Escherichia coli TW07945]
gi|390787745|gb|EIO55218.1| rhomboid protease glpG [Escherichia coli TW10246]
gi|390793881|gb|EIO61208.1| rhomboid protease glpG [Escherichia coli TW11039]
gi|390802127|gb|EIO69176.1| rhomboid protease glpG [Escherichia coli TW09098]
gi|390813999|gb|EIO80579.1| rhomboid protease glpG [Escherichia coli TW10119]
gi|390823572|gb|EIO89621.1| rhomboid protease glpG [Escherichia coli EC4203]
gi|390825173|gb|EIO91113.1| rhomboid protease glpG [Escherichia coli TW09195]
gi|390828457|gb|EIO94123.1| rhomboid protease glpG [Escherichia coli EC4196]
gi|390842767|gb|EIP06603.1| rhomboid protease glpG [Escherichia coli TW14313]
gi|390843812|gb|EIP07587.1| rhomboid protease glpG [Escherichia coli TW14301]
gi|390848469|gb|EIP11939.1| rhomboid protease glpG [Escherichia coli EC4421]
gi|390858895|gb|EIP21263.1| rhomboid protease glpG [Escherichia coli EC4422]
gi|390863276|gb|EIP25417.1| rhomboid protease glpG [Escherichia coli EC4013]
gi|390867825|gb|EIP29597.1| rhomboid protease glpG [Escherichia coli EC4402]
gi|390881533|gb|EIP42123.1| rhomboid protease glpG [Escherichia coli EC4436]
gi|390891280|gb|EIP50917.1| rhomboid protease glpG [Escherichia coli EC4437]
gi|390893422|gb|EIP52984.1| rhomboid protease glpG [Escherichia coli EC4448]
gi|390898160|gb|EIP57433.1| rhomboid protease glpG [Escherichia coli EC1738]
gi|390906546|gb|EIP65437.1| rhomboid protease glpG [Escherichia coli EC1734]
gi|390916574|gb|EIP75026.1| rhomboid protease glpG [Escherichia coli EC1863]
gi|390917501|gb|EIP75924.1| rhomboid protease glpG [Escherichia coli EC1845]
gi|391278540|gb|EIQ37247.1| rhomboid protease glpG [Shigella sonnei 3226-85]
gi|391281724|gb|EIQ40363.1| rhomboid protease glpG [Shigella sonnei 3233-85]
gi|391292101|gb|EIQ50456.1| rhomboid family protein [Shigella sonnei 4822-66]
gi|397896568|gb|EJL12987.1| rhomboid family protein [Shigella sonnei str. Moseley]
gi|408062250|gb|EKG96756.1| rhomboid protease glpG [Escherichia coli PA7]
gi|408064629|gb|EKG99110.1| rhomboid protease glpG [Escherichia coli FRIK920]
gi|408076870|gb|EKH11084.1| rhomboid protease glpG [Escherichia coli FDA506]
gi|408080816|gb|EKH14865.1| rhomboid protease glpG [Escherichia coli FDA507]
gi|408089069|gb|EKH22401.1| rhomboid protease glpG [Escherichia coli FDA504]
gi|408095178|gb|EKH28164.1| rhomboid protease glpG [Escherichia coli FRIK1999]
gi|408101583|gb|EKH34016.1| rhomboid protease glpG [Escherichia coli FRIK1997]
gi|408113097|gb|EKH44704.1| rhomboid protease glpG [Escherichia coli NE037]
gi|408119332|gb|EKH50409.1| rhomboid protease glpG [Escherichia coli FRIK2001]
gi|408125503|gb|EKH56108.1| rhomboid family protease GlpG [Escherichia coli PA4]
gi|408135315|gb|EKH65107.1| rhomboid protease glpG [Escherichia coli PA23]
gi|408138172|gb|EKH67858.1| rhomboid protease glpG [Escherichia coli PA49]
gi|408144586|gb|EKH73816.1| rhomboid protease glpG [Escherichia coli PA45]
gi|408152887|gb|EKH81307.1| rhomboid protease glpG [Escherichia coli TT12B]
gi|408157922|gb|EKH86060.1| rhomboid protease glpG [Escherichia coli MA6]
gi|408161889|gb|EKH89814.1| rhomboid protease glpG [Escherichia coli 5905]
gi|408171346|gb|EKH98473.1| rhomboid protease glpG [Escherichia coli CB7326]
gi|408178040|gb|EKI04783.1| rhomboid protease glpG [Escherichia coli EC96038]
gi|408181127|gb|EKI07703.1| rhomboid protease glpG [Escherichia coli 5412]
gi|408214587|gb|EKI39011.1| rhomboid protease glpG [Escherichia coli PA38]
gi|408224739|gb|EKI48443.1| rhomboid protease glpG [Escherichia coli EC1735]
gi|408236051|gb|EKI58971.1| rhomboid protease glpG [Escherichia coli EC1736]
gi|408239838|gb|EKI62576.1| rhomboid protease glpG [Escherichia coli EC1737]
gi|408244430|gb|EKI66868.1| rhomboid protease glpG [Escherichia coli EC1846]
gi|408253194|gb|EKI74807.1| rhomboid protease glpG [Escherichia coli EC1847]
gi|408256958|gb|EKI78312.1| rhomboid protease glpG [Escherichia coli EC1848]
gi|408263658|gb|EKI84502.1| rhomboid protease glpG [Escherichia coli EC1849]
gi|408272081|gb|EKI92188.1| rhomboid protease glpG [Escherichia coli EC1850]
gi|408274807|gb|EKI94793.1| rhomboid protease glpG [Escherichia coli EC1856]
gi|408283493|gb|EKJ02667.1| rhomboid protease glpG [Escherichia coli EC1862]
gi|408289210|gb|EKJ07984.1| rhomboid protease glpG [Escherichia coli EC1864]
gi|408305799|gb|EKJ23189.1| rhomboid protease glpG [Escherichia coli EC1866]
gi|408316657|gb|EKJ32917.1| rhomboid protease glpG [Escherichia coli EC1869]
gi|408322113|gb|EKJ38108.1| rhomboid protease glpG [Escherichia coli EC1870]
gi|408324380|gb|EKJ40313.1| rhomboid protease glpG [Escherichia coli NE098]
gi|408334712|gb|EKJ49588.1| rhomboid protease glpG [Escherichia coli FRIK523]
gi|408546310|gb|EKK23726.1| rhomboid family protease GlpG [Escherichia coli 5.2239]
gi|408546533|gb|EKK23947.1| rhomboid family protease GlpG [Escherichia coli 3.4870]
gi|408547403|gb|EKK24798.1| rhomboid family protease GlpG [Escherichia coli 6.0172]
gi|408564941|gb|EKK41038.1| rhomboid family protease GlpG [Escherichia coli 8.0586]
gi|408576484|gb|EKK52076.1| rhomboid family protease GlpG [Escherichia coli 10.0833]
gi|408579246|gb|EKK54716.1| rhomboid family protease GlpG [Escherichia coli 8.2524]
gi|408589157|gb|EKK63689.1| rhomboid family protease GlpG [Escherichia coli 10.0869]
gi|408594303|gb|EKK68589.1| rhomboid family protease GlpG [Escherichia coli 88.0221]
gi|408599548|gb|EKK73448.1| rhomboid family protease GlpG [Escherichia coli 8.0416]
gi|427202127|gb|EKV72470.1| rhomboid family protease GlpG [Escherichia coli 88.1042]
gi|427203063|gb|EKV73369.1| rhomboid family protease GlpG [Escherichia coli 89.0511]
gi|427218593|gb|EKV87590.1| rhomboid family protease GlpG [Escherichia coli 90.0091]
gi|427221880|gb|EKV90683.1| rhomboid family protease GlpG [Escherichia coli 90.2281]
gi|427225290|gb|EKV93939.1| rhomboid family protease GlpG [Escherichia coli 90.0039]
gi|427239207|gb|EKW06699.1| rhomboid family protease GlpG [Escherichia coli 93.0056]
gi|427239515|gb|EKW06998.1| rhomboid family protease GlpG [Escherichia coli 93.0055]
gi|427243656|gb|EKW11020.1| rhomboid family protease GlpG [Escherichia coli 94.0618]
gi|427257865|gb|EKW23981.1| rhomboid family protease GlpG [Escherichia coli 95.0183]
gi|427258980|gb|EKW25054.1| rhomboid family protease GlpG [Escherichia coli 95.0943]
gi|427261451|gb|EKW27387.1| rhomboid family protease GlpG [Escherichia coli 95.1288]
gi|427274274|gb|EKW38933.1| rhomboid family protease GlpG [Escherichia coli 96.0428]
gi|427281291|gb|EKW45616.1| rhomboid family protease GlpG [Escherichia coli 96.0939]
gi|427289801|gb|EKW53317.1| rhomboid family protease GlpG [Escherichia coli 96.0932]
gi|427296443|gb|EKW59497.1| rhomboid family protease GlpG [Escherichia coli 96.0107]
gi|427298532|gb|EKW61533.1| rhomboid family protease GlpG [Escherichia coli 97.0003]
gi|427309029|gb|EKW71357.1| rhomboid family protease GlpG [Escherichia coli 97.1742]
gi|427312145|gb|EKW74306.1| rhomboid family protease GlpG [Escherichia coli 97.0007]
gi|427317019|gb|EKW78937.1| rhomboid family protease GlpG [Escherichia coli 99.0672]
gi|427325710|gb|EKW87144.1| rhomboid family protease GlpG [Escherichia coli 99.0678]
gi|427327173|gb|EKW88573.1| rhomboid family protease GlpG [Escherichia coli 99.0713]
gi|429251787|gb|EKY36365.1| rhomboid family protease GlpG [Escherichia coli 96.0109]
gi|429253051|gb|EKY37551.1| rhomboid family protease GlpG [Escherichia coli 97.0010]
gi|430978068|gb|ELC94891.1| rhomboid protease glpG [Escherichia coli KTE193]
gi|431547343|gb|ELI21723.1| rhomboid protease glpG [Escherichia coli KTE112]
gi|444535990|gb|ELV16038.1| rhomboid family protease GlpG [Escherichia coli 99.0814]
gi|444537348|gb|ELV17288.1| rhomboid family protease GlpG [Escherichia coli 09BKT078844]
gi|444546160|gb|ELV24936.1| rhomboid family protease GlpG [Escherichia coli 99.0815]
gi|444555425|gb|ELV32894.1| rhomboid family protease GlpG [Escherichia coli 99.0839]
gi|444555891|gb|ELV33334.1| rhomboid family protease GlpG [Escherichia coli 99.0816]
gi|444560690|gb|ELV37839.1| rhomboid family protease GlpG [Escherichia coli 99.0848]
gi|444569970|gb|ELV46521.1| rhomboid family protease GlpG [Escherichia coli 99.1753]
gi|444573915|gb|ELV50258.1| rhomboid family protease GlpG [Escherichia coli 99.1775]
gi|444576958|gb|ELV53104.1| rhomboid family protease GlpG [Escherichia coli 99.1793]
gi|444590177|gb|ELV65491.1| rhomboid family protease GlpG [Escherichia coli PA11]
gi|444590452|gb|ELV65763.1| rhomboid family protease GlpG [Escherichia coli ATCC 700728]
gi|444591426|gb|ELV66716.1| rhomboid family protease GlpG [Escherichia coli 99.1805]
gi|444604774|gb|ELV79437.1| rhomboid family protease GlpG [Escherichia coli PA19]
gi|444613191|gb|ELV87454.1| rhomboid family protease GlpG [Escherichia coli PA2]
gi|444620896|gb|ELV94888.1| rhomboid family protease GlpG [Escherichia coli PA47]
gi|444621127|gb|ELV95105.1| rhomboid family protease GlpG [Escherichia coli PA48]
gi|444627606|gb|ELW01364.1| rhomboid family protease GlpG [Escherichia coli PA8]
gi|444635901|gb|ELW09310.1| rhomboid family protease GlpG [Escherichia coli 7.1982]
gi|444638453|gb|ELW11791.1| rhomboid family protease GlpG [Escherichia coli 99.1781]
gi|444643015|gb|ELW16186.1| rhomboid family protease GlpG [Escherichia coli 99.1762]
gi|444652413|gb|ELW25174.1| rhomboid family protease GlpG [Escherichia coli PA35]
gi|444660703|gb|ELW33053.1| rhomboid family protease GlpG [Escherichia coli 95.0083]
gi|444667913|gb|ELW39941.1| rhomboid family protease GlpG [Escherichia coli 99.0670]
Length = 276
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T ++I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 97 TWVMMIACVVVFIAMQILGDQEVMLWLAWPFDPALKFEFWRYFTHALMHFSLMHILFNLL 156
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ ALL ++ Q G S
Sbjct: 157 WWWYLGGAVEKRLGSGKLIVIT-----------LISALLSGYVQ----QKFSGPWFGGLS 201
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 202 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFD-----LFGMSMANGA--- 253
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 254 HIAGLAVGLAMAF 266
>gi|407927474|gb|EKG20366.1| Peptidase S54 rhomboid [Macrophomina phaseolina MS6]
Length = 557
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 30/44 (68%)
Query: 63 QVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYI 106
Q YRF I HG L+H+ FNML V +G ++E+++GS+R F +
Sbjct: 289 QWYRFIVPIFLHGGLIHIGFNMLVQVTVGRDMEKLIGSIRFFLV 332
>gi|218702168|ref|YP_002409797.1| intramembrane serine protease GlpG [Escherichia coli IAI39]
gi|300937277|ref|ZP_07152121.1| peptidase, S54 family protein [Escherichia coli MS 21-1]
gi|331649221|ref|ZP_08350307.1| rhomboid protease GlpG (Intramembrane serineprotease) [Escherichia
coli M605]
gi|387831296|ref|YP_003351233.1| hypothetical protein ECSF_3243 [Escherichia coli SE15]
gi|425302273|ref|ZP_18692154.1| rhomboid protease glpG [Escherichia coli 07798]
gi|432399364|ref|ZP_19642138.1| rhomboid protease glpG [Escherichia coli KTE25]
gi|432408489|ref|ZP_19651192.1| rhomboid protease glpG [Escherichia coli KTE28]
gi|432423824|ref|ZP_19666362.1| rhomboid protease glpG [Escherichia coli KTE178]
gi|432442904|ref|ZP_19685239.1| rhomboid protease glpG [Escherichia coli KTE189]
gi|432501973|ref|ZP_19743724.1| rhomboid protease glpG [Escherichia coli KTE216]
gi|432560686|ref|ZP_19797341.1| rhomboid protease glpG [Escherichia coli KTE49]
gi|432682137|ref|ZP_19917495.1| rhomboid protease glpG [Escherichia coli KTE143]
gi|432696283|ref|ZP_19931475.1| rhomboid protease glpG [Escherichia coli KTE162]
gi|432707760|ref|ZP_19942836.1| rhomboid protease glpG [Escherichia coli KTE6]
gi|432724882|ref|ZP_19959795.1| rhomboid protease glpG [Escherichia coli KTE17]
gi|432729465|ref|ZP_19964339.1| rhomboid protease glpG [Escherichia coli KTE18]
gi|432734169|ref|ZP_19968993.1| rhomboid protease glpG [Escherichia coli KTE45]
gi|432743152|ref|ZP_19977866.1| rhomboid protease glpG [Escherichia coli KTE23]
gi|432761254|ref|ZP_19995744.1| rhomboid protease glpG [Escherichia coli KTE46]
gi|432890865|ref|ZP_20103720.1| rhomboid protease glpG [Escherichia coli KTE165]
gi|432982862|ref|ZP_20171632.1| rhomboid protease glpG [Escherichia coli KTE211]
gi|432992516|ref|ZP_20181174.1| rhomboid protease glpG [Escherichia coli KTE217]
gi|433015721|ref|ZP_20204054.1| rhomboid protease glpG [Escherichia coli KTE104]
gi|433098225|ref|ZP_20284397.1| rhomboid protease glpG [Escherichia coli KTE139]
gi|433107672|ref|ZP_20293633.1| rhomboid protease glpG [Escherichia coli KTE148]
gi|433112650|ref|ZP_20298504.1| rhomboid protease glpG [Escherichia coli KTE150]
gi|433324368|ref|ZP_20401664.1| rhomboid intramembrane serine protease [Escherichia coli J96]
gi|226729475|sp|B7NMI8.1|GLPG_ECO7I RecName: Full=Rhomboid protease GlpG; AltName: Full=Intramembrane
serine protease
gi|218372154|emb|CAR20016.1| putative intramembrane serine protease [Escherichia coli IAI39]
gi|281180453|dbj|BAI56783.1| conserved hypothetical protein [Escherichia coli SE15]
gi|300457679|gb|EFK21172.1| peptidase, S54 family protein [Escherichia coli MS 21-1]
gi|331041719|gb|EGI13863.1| rhomboid protease GlpG (Intramembrane serineprotease) [Escherichia
coli M605]
gi|408211160|gb|EKI35713.1| rhomboid protease glpG [Escherichia coli 07798]
gi|430913237|gb|ELC34367.1| rhomboid protease glpG [Escherichia coli KTE25]
gi|430927360|gb|ELC47924.1| rhomboid protease glpG [Escherichia coli KTE28]
gi|430942168|gb|ELC62306.1| rhomboid protease glpG [Escherichia coli KTE178]
gi|430963947|gb|ELC81526.1| rhomboid protease glpG [Escherichia coli KTE189]
gi|431026152|gb|ELD39227.1| rhomboid protease glpG [Escherichia coli KTE216]
gi|431088747|gb|ELD94617.1| rhomboid protease glpG [Escherichia coli KTE49]
gi|431217684|gb|ELF15250.1| rhomboid protease glpG [Escherichia coli KTE143]
gi|431231509|gb|ELF27270.1| rhomboid protease glpG [Escherichia coli KTE162]
gi|431255294|gb|ELF48548.1| rhomboid protease glpG [Escherichia coli KTE6]
gi|431262101|gb|ELF54091.1| rhomboid protease glpG [Escherichia coli KTE17]
gi|431271282|gb|ELF62421.1| rhomboid protease glpG [Escherichia coli KTE18]
gi|431272062|gb|ELF63180.1| rhomboid protease glpG [Escherichia coli KTE45]
gi|431281309|gb|ELF72212.1| rhomboid protease glpG [Escherichia coli KTE23]
gi|431306561|gb|ELF94874.1| rhomboid protease glpG [Escherichia coli KTE46]
gi|431431159|gb|ELH12937.1| rhomboid protease glpG [Escherichia coli KTE165]
gi|431489460|gb|ELH69087.1| rhomboid protease glpG [Escherichia coli KTE211]
gi|431491666|gb|ELH71270.1| rhomboid protease glpG [Escherichia coli KTE217]
gi|431527097|gb|ELI03824.1| rhomboid protease glpG [Escherichia coli KTE104]
gi|431612715|gb|ELI81927.1| rhomboid protease glpG [Escherichia coli KTE139]
gi|431624164|gb|ELI92785.1| rhomboid protease glpG [Escherichia coli KTE148]
gi|431625604|gb|ELI94182.1| rhomboid protease glpG [Escherichia coli KTE150]
gi|432347214|gb|ELL41677.1| rhomboid intramembrane serine protease [Escherichia coli J96]
Length = 276
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T ++I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 97 TWVMMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLL 156
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ ALL ++ Q G S
Sbjct: 157 WWWYLGGAVEKRLGSGKLIVIT-----------LISALLSGYVQ----QKFSGPWFGGLS 201
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 202 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFD-----LFGMSMANGA--- 253
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 254 HIAGLAVGLAMAF 266
>gi|432545139|ref|ZP_19781973.1| rhomboid protease glpG [Escherichia coli KTE236]
gi|432550621|ref|ZP_19787380.1| rhomboid protease glpG [Escherichia coli KTE237]
gi|432623763|ref|ZP_19859780.1| rhomboid protease glpG [Escherichia coli KTE76]
gi|432817169|ref|ZP_20050929.1| rhomboid protease glpG [Escherichia coli KTE115]
gi|431071966|gb|ELD79723.1| rhomboid protease glpG [Escherichia coli KTE236]
gi|431077523|gb|ELD84774.1| rhomboid protease glpG [Escherichia coli KTE237]
gi|431156691|gb|ELE57358.1| rhomboid protease glpG [Escherichia coli KTE76]
gi|431361572|gb|ELG48153.1| rhomboid protease glpG [Escherichia coli KTE115]
Length = 276
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T ++I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 97 TWVMMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLL 156
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ ALL ++ Q G S
Sbjct: 157 WWWYLGGAVEKRLGSGKLIVIT-----------LISALLSGYVQ----QKFSGPWFGGLS 201
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 202 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFD-----LFGMSMANGA--- 253
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 254 HIAGLAVGLAMAF 266
>gi|90424620|ref|YP_532990.1| rhomboid-like protein [Rhodopseudomonas palustris BisB18]
gi|90106634|gb|ABD88671.1| Rhomboid-like protein [Rhodopseudomonas palustris BisB18]
Length = 276
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 45 YDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMF 104
YDS P ++ ++ F T + H +L H+LFN+L L+P GS L R G+VR F
Sbjct: 78 YDSTLLATPFPGGTAAK--IWSFVTYSLLHANLSHILFNVLWLLPFGSALARRFGAVRFF 135
Query: 105 YITILLATSNAILHLL 120
+ A + A+ HL+
Sbjct: 136 VFMAVTAIAGALAHLV 151
>gi|26250025|ref|NP_756065.1| intramembrane serine protease GlpG [Escherichia coli CFT073]
gi|49176353|ref|YP_026220.1| rhomboid intramembrane serine protease [Escherichia coli str. K-12
substr. MG1655]
gi|91212898|ref|YP_542884.1| intramembrane serine protease GlpG [Escherichia coli UTI89]
gi|110643656|ref|YP_671386.1| intramembrane serine protease GlpG [Escherichia coli 536]
gi|117625688|ref|YP_859011.1| intramembrane serine protease GlpG [Escherichia coli APEC O1]
gi|157162901|ref|YP_001460219.1| intramembrane serine protease GlpG [Escherichia coli HS]
gi|170018341|ref|YP_001723295.1| intramembrane serine protease GlpG [Escherichia coli ATCC 8739]
gi|170082939|ref|YP_001732259.1| intramembrane serine protease GlpG [Escherichia coli str. K-12
substr. DH10B]
gi|170683698|ref|YP_001745671.1| intramembrane serine protease GlpG [Escherichia coli SMS-3-5]
gi|194435662|ref|ZP_03067765.1| peptidase, S54 (rhomboid) family [Escherichia coli 101-1]
gi|215488704|ref|YP_002331135.1| intramembrane serine protease GlpG [Escherichia coli O127:H6 str.
E2348/69]
gi|218560480|ref|YP_002393393.1| intramembrane serine protease GlpG [Escherichia coli S88]
gi|218707014|ref|YP_002414533.1| intramembrane serine protease GlpG [Escherichia coli UMN026]
gi|222158119|ref|YP_002558258.1| Protein glpG [Escherichia coli LF82]
gi|227883558|ref|ZP_04001363.1| intramembrane serine protease GlpG [Escherichia coli 83972]
gi|237703155|ref|ZP_04533636.1| rhomboid protease glpG [Escherichia sp. 3_2_53FAA]
gi|238902517|ref|YP_002928313.1| intramembrane serine protease GlpG [Escherichia coli BW2952]
gi|251786673|ref|YP_003000977.1| intramembrane serine protease GlpG [Escherichia coli BL21(DE3)]
gi|253771747|ref|YP_003034578.1| intramembrane serine protease GlpG [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254163351|ref|YP_003046459.1| intramembrane serine protease GlpG [Escherichia coli B str. REL606]
gi|254290101|ref|YP_003055849.1| intramembrane serine protease [Escherichia coli BL21(DE3)]
gi|293407001|ref|ZP_06650925.1| intramembrane serine protease GlpG [Escherichia coli FVEC1412]
gi|293412841|ref|ZP_06655509.1| conserved hypothetical protein [Escherichia coli B354]
gi|298382743|ref|ZP_06992338.1| rhomboid protease glpG [Escherichia coli FVEC1302]
gi|300898885|ref|ZP_07117188.1| peptidase, S54 family protein [Escherichia coli MS 198-1]
gi|300931041|ref|ZP_07146398.1| peptidase, S54 family protein [Escherichia coli MS 187-1]
gi|300985297|ref|ZP_07177394.1| peptidase, S54 family protein [Escherichia coli MS 45-1]
gi|300987310|ref|ZP_07178118.1| peptidase, S54 family protein [Escherichia coli MS 200-1]
gi|301019553|ref|ZP_07183716.1| peptidase, S54 family protein [Escherichia coli MS 69-1]
gi|301050364|ref|ZP_07197253.1| peptidase, S54 family protein [Escherichia coli MS 185-1]
gi|301645865|ref|ZP_07245779.1| peptidase, S54 family protein [Escherichia coli MS 146-1]
gi|312968264|ref|ZP_07782474.1| rhomboid family protein [Escherichia coli 2362-75]
gi|312972313|ref|ZP_07786487.1| rhomboid family protein [Escherichia coli 1827-70]
gi|331644124|ref|ZP_08345253.1| rhomboid protease GlpG (Intramembrane serineprotease) [Escherichia
coli H736]
gi|331655004|ref|ZP_08356003.1| rhomboid protease GlpG (Intramembrane serineprotease) [Escherichia
coli M718]
gi|331665029|ref|ZP_08365930.1| rhomboid protease GlpG (Intramembrane serineprotease) [Escherichia
coli TA143]
gi|386282910|ref|ZP_10060550.1| rhomboid protease glpG [Escherichia sp. 4_1_40B]
gi|386593869|ref|YP_006090269.1| rhomboid family protein [Escherichia coli DH1]
gi|386601437|ref|YP_006102943.1| peptidase, S54 (rhomboid) family [Escherichia coli IHE3034]
gi|386616207|ref|YP_006135873.1| hypothetical protein UMNK88_4191 [Escherichia coli UMNK88]
gi|386631307|ref|YP_006151027.1| intramembrane serine protease GlpG [Escherichia coli str. 'clone D
i2']
gi|386636227|ref|YP_006155946.1| intramembrane serine protease GlpG [Escherichia coli str. 'clone D
i14']
gi|386641017|ref|YP_006107815.1| inner membrane-associated protein of glp regulon [Escherichia coli
ABU 83972]
gi|386706667|ref|YP_006170514.1| Rhomboid protease glpG [Escherichia coli P12b]
gi|387609115|ref|YP_006097971.1| hypothetical protein EC042_3684 [Escherichia coli 042]
gi|387614097|ref|YP_006117213.1| hypothetical protein ETEC_3673 [Escherichia coli ETEC H10407]
gi|387618710|ref|YP_006121732.1| intramembrane serine protease GlpG [Escherichia coli O83:H1 str.
NRG 857C]
gi|387623075|ref|YP_006130703.1| intramembrane serine protease GlpG [Escherichia coli DH1]
gi|388479815|ref|YP_492009.1| intramembrane serine protease [Escherichia coli str. K-12 substr.
W3110]
gi|404376796|ref|ZP_10981948.1| rhomboid protease glpG [Escherichia sp. 1_1_43]
gi|415779658|ref|ZP_11490299.1| rhomboid family protein [Escherichia coli 3431]
gi|416899799|ref|ZP_11929205.1| rhomboid family protein [Escherichia coli STEC_7v]
gi|417271261|ref|ZP_12058610.1| rhomboid protease GlpG [Escherichia coli 2.4168]
gi|417276182|ref|ZP_12063514.1| rhomboid protease GlpG [Escherichia coli 3.2303]
gi|417615024|ref|ZP_12265477.1| rhomboid family protein [Escherichia coli STEC_EH250]
gi|417636517|ref|ZP_12286726.1| rhomboid family protein [Escherichia coli STEC_S1191]
gi|417674721|ref|ZP_12324154.1| rhomboid family protein [Shigella dysenteriae 155-74]
gi|417945183|ref|ZP_12588419.1| intramembrane serine protease GlpG [Escherichia coli XH140A]
gi|417977010|ref|ZP_12617798.1| intramembrane serine protease GlpG [Escherichia coli XH001]
gi|418956186|ref|ZP_13508114.1| rhomboid family protein [Escherichia coli J53]
gi|419009802|ref|ZP_13557220.1| rhomboid family protein [Escherichia coli DEC1C]
gi|419020433|ref|ZP_13567731.1| rhomboid family protein [Escherichia coli DEC1E]
gi|419025898|ref|ZP_13573116.1| rhomboid protease glpG [Escherichia coli DEC2A]
gi|419036613|ref|ZP_13583688.1| rhomboid family protein [Escherichia coli DEC2D]
gi|419150561|ref|ZP_13695209.1| rhomboid family protein [Escherichia coli DEC6B]
gi|419155900|ref|ZP_13700456.1| rhomboid protease glpG [Escherichia coli DEC6C]
gi|419161241|ref|ZP_13705737.1| rhomboid protease glpG [Escherichia coli DEC6D]
gi|419702246|ref|ZP_14229841.1| intramembrane serine protease GlpG [Escherichia coli SCI-07]
gi|419811672|ref|ZP_14336545.1| intramembrane serine protease GlpG [Escherichia coli O32:H37 str.
P4]
gi|419912351|ref|ZP_14430806.1| intramembrane serine protease GlpG [Escherichia coli KD1]
gi|422333760|ref|ZP_16414769.1| rhomboid protease glpG [Escherichia coli 4_1_47FAA]
gi|422360123|ref|ZP_16440760.1| peptidase, S54 family protein [Escherichia coli MS 110-3]
gi|422365613|ref|ZP_16446106.1| peptidase, S54 family protein [Escherichia coli MS 153-1]
gi|422372294|ref|ZP_16452659.1| peptidase, S54 family protein [Escherichia coli MS 16-3]
gi|422374078|ref|ZP_16454372.1| peptidase, S54 family protein [Escherichia coli MS 60-1]
gi|422379368|ref|ZP_16459564.1| peptidase, S54 family protein [Escherichia coli MS 57-2]
gi|422773452|ref|ZP_16827136.1| rhomboid family protein [Escherichia coli E482]
gi|422788685|ref|ZP_16841420.1| rhomboid family protein [Escherichia coli H489]
gi|422801346|ref|ZP_16849842.1| rhomboid family protein [Escherichia coli M863]
gi|422818583|ref|ZP_16866795.1| rhomboid protease glpG [Escherichia coli M919]
gi|422830450|ref|ZP_16878608.1| rhomboid protease glpG [Escherichia coli B093]
gi|422841428|ref|ZP_16889397.1| rhomboid protease glpG [Escherichia coli H397]
gi|423702925|ref|ZP_17677357.1| rhomboid protease glpG [Escherichia coli H730]
gi|424817946|ref|ZP_18243097.1| intramembrane serine protease GlpG [Escherichia fergusonii ECD227]
gi|425116986|ref|ZP_18518771.1| rhomboid family protease GlpG [Escherichia coli 8.0566]
gi|425274623|ref|ZP_18666018.1| rhomboid protease glpG [Escherichia coli TW15901]
gi|425285202|ref|ZP_18676229.1| rhomboid protease glpG [Escherichia coli TW00353]
gi|425307213|ref|ZP_18696889.1| rhomboid protease glpG [Escherichia coli N1]
gi|432355399|ref|ZP_19598666.1| rhomboid protease glpG [Escherichia coli KTE2]
gi|432359868|ref|ZP_19603081.1| rhomboid protease glpG [Escherichia coli KTE4]
gi|432364665|ref|ZP_19607820.1| rhomboid protease glpG [Escherichia coli KTE5]
gi|432366871|ref|ZP_19609988.1| rhomboid protease glpG [Escherichia coli KTE10]
gi|432403774|ref|ZP_19646518.1| rhomboid protease glpG [Escherichia coli KTE26]
gi|432418945|ref|ZP_19661538.1| rhomboid protease glpG [Escherichia coli KTE44]
gi|432428035|ref|ZP_19670518.1| rhomboid protease glpG [Escherichia coli KTE181]
gi|432433631|ref|ZP_19676055.1| rhomboid protease glpG [Escherichia coli KTE187]
gi|432462739|ref|ZP_19704872.1| rhomboid protease glpG [Escherichia coli KTE204]
gi|432467731|ref|ZP_19709809.1| rhomboid protease glpG [Escherichia coli KTE205]
gi|432472768|ref|ZP_19714805.1| rhomboid protease glpG [Escherichia coli KTE206]
gi|432477733|ref|ZP_19719722.1| rhomboid protease glpG [Escherichia coli KTE208]
gi|432487182|ref|ZP_19729090.1| rhomboid protease glpG [Escherichia coli KTE212]
gi|432491180|ref|ZP_19733043.1| rhomboid protease glpG [Escherichia coli KTE213]
gi|432519593|ref|ZP_19756772.1| rhomboid protease glpG [Escherichia coli KTE228]
gi|432539751|ref|ZP_19776644.1| rhomboid protease glpG [Escherichia coli KTE235]
gi|432555504|ref|ZP_19792222.1| rhomboid protease glpG [Escherichia coli KTE47]
gi|432565789|ref|ZP_19802349.1| rhomboid protease glpG [Escherichia coli KTE51]
gi|432575652|ref|ZP_19812123.1| rhomboid protease glpG [Escherichia coli KTE55]
gi|432577650|ref|ZP_19814099.1| rhomboid protease glpG [Escherichia coli KTE56]
gi|432584945|ref|ZP_19821336.1| rhomboid protease glpG [Escherichia coli KTE57]
gi|432589797|ref|ZP_19826149.1| rhomboid protease glpG [Escherichia coli KTE58]
gi|432599667|ref|ZP_19835937.1| rhomboid protease glpG [Escherichia coli KTE62]
gi|432604243|ref|ZP_19840473.1| rhomboid protease glpG [Escherichia coli KTE66]
gi|432629051|ref|ZP_19865019.1| rhomboid protease glpG [Escherichia coli KTE77]
gi|432633271|ref|ZP_19869191.1| rhomboid protease glpG [Escherichia coli KTE80]
gi|432642961|ref|ZP_19878786.1| rhomboid protease glpG [Escherichia coli KTE83]
gi|432662630|ref|ZP_19898264.1| rhomboid protease glpG [Escherichia coli KTE111]
gi|432667958|ref|ZP_19903530.1| rhomboid protease glpG [Escherichia coli KTE116]
gi|432672508|ref|ZP_19908031.1| rhomboid protease glpG [Escherichia coli KTE119]
gi|432687239|ref|ZP_19922529.1| rhomboid protease glpG [Escherichia coli KTE156]
gi|432688693|ref|ZP_19923963.1| rhomboid protease glpG [Escherichia coli KTE161]
gi|432706156|ref|ZP_19941251.1| rhomboid protease glpG [Escherichia coli KTE171]
gi|432715273|ref|ZP_19950299.1| rhomboid protease glpG [Escherichia coli KTE8]
gi|432720541|ref|ZP_19955505.1| rhomboid protease glpG [Escherichia coli KTE9]
gi|432747397|ref|ZP_19982058.1| rhomboid protease glpG [Escherichia coli KTE43]
gi|432756347|ref|ZP_19990891.1| rhomboid protease glpG [Escherichia coli KTE22]
gi|432767769|ref|ZP_20002162.1| rhomboid protease glpG [Escherichia coli KTE50]
gi|432772152|ref|ZP_20006466.1| rhomboid protease glpG [Escherichia coli KTE54]
gi|432780427|ref|ZP_20014647.1| rhomboid protease glpG [Escherichia coli KTE59]
gi|432789420|ref|ZP_20023547.1| rhomboid protease glpG [Escherichia coli KTE65]
gi|432794617|ref|ZP_20028698.1| rhomboid protease glpG [Escherichia coli KTE78]
gi|432796133|ref|ZP_20030173.1| rhomboid protease glpG [Escherichia coli KTE79]
gi|432803589|ref|ZP_20037541.1| rhomboid protease glpG [Escherichia coli KTE84]
gi|432822856|ref|ZP_20056544.1| rhomboid protease glpG [Escherichia coli KTE118]
gi|432824309|ref|ZP_20057979.1| rhomboid protease glpG [Escherichia coli KTE123]
gi|432841207|ref|ZP_20074666.1| rhomboid protease glpG [Escherichia coli KTE140]
gi|432865466|ref|ZP_20088563.1| rhomboid protease glpG [Escherichia coli KTE146]
gi|432877486|ref|ZP_20095206.1| rhomboid protease glpG [Escherichia coli KTE154]
gi|432888737|ref|ZP_20102450.1| rhomboid protease glpG [Escherichia coli KTE158]
gi|432900683|ref|ZP_20111062.1| rhomboid protease glpG [Escherichia coli KTE192]
gi|432914976|ref|ZP_20120303.1| rhomboid protease glpG [Escherichia coli KTE190]
gi|432957274|ref|ZP_20148777.1| rhomboid protease glpG [Escherichia coli KTE197]
gi|432963926|ref|ZP_20153273.1| rhomboid protease glpG [Escherichia coli KTE202]
gi|432997182|ref|ZP_20185764.1| rhomboid protease glpG [Escherichia coli KTE218]
gi|433007000|ref|ZP_20195423.1| rhomboid protease glpG [Escherichia coli KTE227]
gi|433009616|ref|ZP_20198028.1| rhomboid protease glpG [Escherichia coli KTE229]
gi|433020548|ref|ZP_20208692.1| rhomboid protease glpG [Escherichia coli KTE105]
gi|433030331|ref|ZP_20218180.1| rhomboid protease glpG [Escherichia coli KTE109]
gi|433049860|ref|ZP_20237193.1| rhomboid protease glpG [Escherichia coli KTE120]
gi|433055031|ref|ZP_20242196.1| rhomboid protease glpG [Escherichia coli KTE122]
gi|433064853|ref|ZP_20251762.1| rhomboid protease glpG [Escherichia coli KTE125]
gi|433069722|ref|ZP_20256494.1| rhomboid protease glpG [Escherichia coli KTE128]
gi|433074672|ref|ZP_20261312.1| rhomboid protease glpG [Escherichia coli KTE129]
gi|433079609|ref|ZP_20266127.1| rhomboid protease glpG [Escherichia coli KTE131]
gi|433084346|ref|ZP_20270792.1| rhomboid protease glpG [Escherichia coli KTE133]
gi|433117299|ref|ZP_20303083.1| rhomboid protease glpG [Escherichia coli KTE153]
gi|433122029|ref|ZP_20307687.1| rhomboid protease glpG [Escherichia coli KTE157]
gi|433155567|ref|ZP_20340498.1| rhomboid protease glpG [Escherichia coli KTE176]
gi|433160508|ref|ZP_20345333.1| rhomboid protease glpG [Escherichia coli KTE177]
gi|433165409|ref|ZP_20350138.1| rhomboid protease glpG [Escherichia coli KTE179]
gi|433170407|ref|ZP_20355026.1| rhomboid protease glpG [Escherichia coli KTE180]
gi|433175308|ref|ZP_20359819.1| rhomboid protease glpG [Escherichia coli KTE232]
gi|433180228|ref|ZP_20364612.1| rhomboid protease glpG [Escherichia coli KTE82]
gi|433185135|ref|ZP_20369371.1| rhomboid protease glpG [Escherichia coli KTE85]
gi|433205125|ref|ZP_20388874.1| rhomboid protease glpG [Escherichia coli KTE95]
gi|442604072|ref|ZP_21018920.1| GlpG protein (membrane protein of glp regulon) [Escherichia coli
Nissle 1917]
gi|450251568|ref|ZP_21901893.1| intramembrane serine protease GlpG [Escherichia coli S17]
gi|54041233|sp|P09391.5|GLPG_ECOLI RecName: Full=Rhomboid protease GlpG; AltName: Full=Intramembrane
serine protease
gi|81473977|sp|Q8FCS5.1|GLPG_ECOL6 RecName: Full=Rhomboid protease GlpG; AltName: Full=Intramembrane
serine protease
gi|122422082|sp|Q1R5L1.1|GLPG_ECOUT RecName: Full=Rhomboid protease GlpG; AltName: Full=Intramembrane
serine protease
gi|123147598|sp|Q0TC44.1|GLPG_ECOL5 RecName: Full=Rhomboid protease GlpG; AltName: Full=Intramembrane
serine protease
gi|171704413|sp|A1AGU7.1|GLPG_ECOK1 RecName: Full=Rhomboid protease GlpG; AltName: Full=Intramembrane
serine protease
gi|172044452|sp|A8A5N2.1|GLPG_ECOHS RecName: Full=Rhomboid protease GlpG; AltName: Full=Intramembrane
serine protease
gi|189041236|sp|B1IP42.1|GLPG_ECOLC RecName: Full=Rhomboid protease GlpG; AltName: Full=Intramembrane
serine protease
gi|226729473|sp|B7MDQ0.1|GLPG_ECO45 RecName: Full=Rhomboid protease GlpG; AltName: Full=Intramembrane
serine protease
gi|226729477|sp|B1X769.1|GLPG_ECODH RecName: Full=Rhomboid protease GlpG; AltName: Full=Intramembrane
serine protease
gi|226729478|sp|B7NE28.1|GLPG_ECOLU RecName: Full=Rhomboid protease GlpG; AltName: Full=Intramembrane
serine protease
gi|226729480|sp|B1LI84.1|GLPG_ECOSM RecName: Full=Rhomboid protease GlpG; AltName: Full=Intramembrane
serine protease
gi|254798881|sp|B7UKC8.1|GLPG_ECO27 RecName: Full=Rhomboid protease GlpG; AltName: Full=Intramembrane
serine protease
gi|259492022|sp|C4ZVX5.1|GLPG_ECOBW RecName: Full=Rhomboid protease GlpG; AltName: Full=Intramembrane
serine protease
gi|26110454|gb|AAN82639.1|AE016768_57 Protein glpG [Escherichia coli CFT073]
gi|48994938|gb|AAT48182.1| rhomboid intramembrane serine protease [Escherichia coli str. K-12
substr. MG1655]
gi|85676618|dbj|BAE77868.1| predicted intramembrane serine protease [Escherichia coli str. K12
substr. W3110]
gi|91074472|gb|ABE09353.1| inner membrane-associated protein of glp regulon [Escherichia coli
UTI89]
gi|110345248|gb|ABG71485.1| protein GlpG [Escherichia coli 536]
gi|115514812|gb|ABJ02887.1| putative intramembrane serine protease GlpG [Escherichia coli APEC
O1]
gi|157068581|gb|ABV07836.1| peptidase, S54 (rhomboid) family [Escherichia coli HS]
gi|169753269|gb|ACA75968.1| Rhomboid family protein [Escherichia coli ATCC 8739]
gi|169890774|gb|ACB04481.1| predicted intramembrane serine protease [Escherichia coli str. K-12
substr. DH10B]
gi|170521416|gb|ACB19594.1| peptidase, S54 (rhomboid) family [Escherichia coli SMS-3-5]
gi|194425205|gb|EDX41189.1| peptidase, S54 (rhomboid) family [Escherichia coli 101-1]
gi|215266776|emb|CAS11216.1| predicted intramembrane serine protease [Escherichia coli O127:H6
str. E2348/69]
gi|218367249|emb|CAR05025.1| putative intramembrane serine protease [Escherichia coli S88]
gi|218434111|emb|CAR15028.1| putative intramembrane serine protease [Escherichia coli UMN026]
gi|222035124|emb|CAP77869.1| Protein glpG [Escherichia coli LF82]
gi|226839097|gb|EEH71120.1| rhomboid protease glpG [Escherichia sp. 1_1_43]
gi|226902419|gb|EEH88678.1| rhomboid protease glpG [Escherichia sp. 3_2_53FAA]
gi|227839437|gb|EEJ49903.1| intramembrane serine protease GlpG [Escherichia coli 83972]
gi|238862594|gb|ACR64592.1| predicted intramembrane serine protease [Escherichia coli BW2952]
gi|242378946|emb|CAQ33744.1| intramembrane serine protease GlpG [Escherichia coli BL21(DE3)]
gi|253322791|gb|ACT27393.1| Rhomboid protease [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253975252|gb|ACT40923.1| predicted intramembrane serine protease [Escherichia coli B str.
REL606]
gi|253979408|gb|ACT45078.1| predicted intramembrane serine protease [Escherichia coli
BL21(DE3)]
gi|260447558|gb|ACX37980.1| Rhomboid family protein [Escherichia coli DH1]
gi|284923415|emb|CBG36509.1| putative membrane protein [Escherichia coli 042]
gi|291425812|gb|EFE98846.1| intramembrane serine protease GlpG [Escherichia coli FVEC1412]
gi|291468488|gb|EFF10981.1| conserved hypothetical protein [Escherichia coli B354]
gi|294492754|gb|ADE91510.1| peptidase, S54 (rhomboid) family [Escherichia coli IHE3034]
gi|298276579|gb|EFI18097.1| rhomboid protease glpG [Escherichia coli FVEC1302]
gi|300297993|gb|EFJ54378.1| peptidase, S54 family protein [Escherichia coli MS 185-1]
gi|300306178|gb|EFJ60698.1| peptidase, S54 family protein [Escherichia coli MS 200-1]
gi|300357506|gb|EFJ73376.1| peptidase, S54 family protein [Escherichia coli MS 198-1]
gi|300399208|gb|EFJ82746.1| peptidase, S54 family protein [Escherichia coli MS 69-1]
gi|300408168|gb|EFJ91706.1| peptidase, S54 family protein [Escherichia coli MS 45-1]
gi|300461146|gb|EFK24639.1| peptidase, S54 family protein [Escherichia coli MS 187-1]
gi|301075854|gb|EFK90660.1| peptidase, S54 family protein [Escherichia coli MS 146-1]
gi|307555509|gb|ADN48284.1| inner membrane-associated protein of glp regulon [Escherichia coli
ABU 83972]
gi|309703833|emb|CBJ03174.1| putative membrane protein [Escherichia coli ETEC H10407]
gi|310334690|gb|EFQ00895.1| rhomboid family protein [Escherichia coli 1827-70]
gi|312287089|gb|EFR14999.1| rhomboid family protein [Escherichia coli 2362-75]
gi|312947971|gb|ADR28798.1| intramembrane serine protease GlpG [Escherichia coli O83:H1 str.
NRG 857C]
gi|315137999|dbj|BAJ45158.1| intramembrane serine protease GlpG [Escherichia coli DH1]
gi|315286076|gb|EFU45514.1| peptidase, S54 family protein [Escherichia coli MS 110-3]
gi|315291735|gb|EFU51091.1| peptidase, S54 family protein [Escherichia coli MS 153-1]
gi|315296019|gb|EFU55328.1| peptidase, S54 family protein [Escherichia coli MS 16-3]
gi|315614692|gb|EFU95332.1| rhomboid family protein [Escherichia coli 3431]
gi|323939357|gb|EGB35568.1| rhomboid family protein [Escherichia coli E482]
gi|323959577|gb|EGB55229.1| rhomboid family protein [Escherichia coli H489]
gi|323966236|gb|EGB61672.1| rhomboid family protein [Escherichia coli M863]
gi|324009402|gb|EGB78621.1| peptidase, S54 family protein [Escherichia coli MS 57-2]
gi|324014509|gb|EGB83728.1| peptidase, S54 family protein [Escherichia coli MS 60-1]
gi|325498966|gb|EGC96825.1| intramembrane serine protease GlpG [Escherichia fergusonii ECD227]
gi|327251059|gb|EGE62752.1| rhomboid family protein [Escherichia coli STEC_7v]
gi|331036418|gb|EGI08644.1| rhomboid protease GlpG (Intramembrane serineprotease) [Escherichia
coli H736]
gi|331047019|gb|EGI19097.1| rhomboid protease GlpG (Intramembrane serineprotease) [Escherichia
coli M718]
gi|331057539|gb|EGI29525.1| rhomboid protease GlpG (Intramembrane serineprotease) [Escherichia
coli TA143]
gi|332086005|gb|EGI91169.1| rhomboid family protein [Shigella dysenteriae 155-74]
gi|332345376|gb|AEE58710.1| conserved hypothetical protein [Escherichia coli UMNK88]
gi|342363161|gb|EGU27272.1| intramembrane serine protease GlpG [Escherichia coli XH140A]
gi|344193277|gb|EGV47359.1| intramembrane serine protease GlpG [Escherichia coli XH001]
gi|345359415|gb|EGW91592.1| rhomboid family protein [Escherichia coli STEC_EH250]
gi|345385405|gb|EGX15250.1| rhomboid family protein [Escherichia coli STEC_S1191]
gi|355422206|gb|AER86403.1| intramembrane serine protease GlpG [Escherichia coli str. 'clone D
i2']
gi|355427126|gb|AER91322.1| intramembrane serine protease GlpG [Escherichia coli str. 'clone D
i14']
gi|359333589|dbj|BAL40036.1| predicted intramembrane serine protease [Escherichia coli str. K-12
substr. MDS42]
gi|371604680|gb|EHN93307.1| rhomboid protease glpG [Escherichia coli H397]
gi|371605144|gb|EHN93764.1| rhomboid protease glpG [Escherichia coli B093]
gi|373245192|gb|EHP64664.1| rhomboid protease glpG [Escherichia coli 4_1_47FAA]
gi|377840579|gb|EHU05651.1| rhomboid family protein [Escherichia coli DEC1C]
gi|377857218|gb|EHU22072.1| rhomboid family protein [Escherichia coli DEC1E]
gi|377859862|gb|EHU24690.1| rhomboid protease glpG [Escherichia coli DEC2A]
gi|377875435|gb|EHU40045.1| rhomboid family protein [Escherichia coli DEC2D]
gi|377989852|gb|EHV53018.1| rhomboid family protein [Escherichia coli DEC6B]
gi|377993577|gb|EHV56709.1| rhomboid protease glpG [Escherichia coli DEC6C]
gi|378004792|gb|EHV67803.1| rhomboid protease glpG [Escherichia coli DEC6D]
gi|380346535|gb|EIA34828.1| intramembrane serine protease GlpG [Escherichia coli SCI-07]
gi|383104835|gb|AFG42344.1| Rhomboid protease glpG [Escherichia coli P12b]
gi|384380946|gb|EIE38809.1| rhomboid family protein [Escherichia coli J53]
gi|385155441|gb|EIF17444.1| intramembrane serine protease GlpG [Escherichia coli O32:H37 str.
P4]
gi|385537989|gb|EIF84856.1| rhomboid protease glpG [Escherichia coli M919]
gi|385709659|gb|EIG46656.1| rhomboid protease glpG [Escherichia coli H730]
gi|386119911|gb|EIG68548.1| rhomboid protease glpG [Escherichia sp. 4_1_40B]
gi|386234961|gb|EII66937.1| rhomboid protease GlpG [Escherichia coli 2.4168]
gi|386241433|gb|EII78351.1| rhomboid protease GlpG [Escherichia coli 3.2303]
gi|388391753|gb|EIL53198.1| intramembrane serine protease GlpG [Escherichia coli KD1]
gi|408190826|gb|EKI16458.1| rhomboid protease glpG [Escherichia coli TW15901]
gi|408199588|gb|EKI24787.1| rhomboid protease glpG [Escherichia coli TW00353]
gi|408226118|gb|EKI49777.1| rhomboid protease glpG [Escherichia coli N1]
gi|408564619|gb|EKK40721.1| rhomboid family protease GlpG [Escherichia coli 8.0566]
gi|430872870|gb|ELB96450.1| rhomboid protease glpG [Escherichia coli KTE2]
gi|430874177|gb|ELB97742.1| rhomboid protease glpG [Escherichia coli KTE4]
gi|430883516|gb|ELC06510.1| rhomboid protease glpG [Escherichia coli KTE5]
gi|430891674|gb|ELC14200.1| rhomboid protease glpG [Escherichia coli KTE10]
gi|430923187|gb|ELC43924.1| rhomboid protease glpG [Escherichia coli KTE26]
gi|430936723|gb|ELC56991.1| rhomboid protease glpG [Escherichia coli KTE44]
gi|430950806|gb|ELC70034.1| rhomboid protease glpG [Escherichia coli KTE187]
gi|430951873|gb|ELC71081.1| rhomboid protease glpG [Escherichia coli KTE181]
gi|430986002|gb|ELD02585.1| rhomboid protease glpG [Escherichia coli KTE204]
gi|430991351|gb|ELD07755.1| rhomboid protease glpG [Escherichia coli KTE205]
gi|430995759|gb|ELD12049.1| rhomboid protease glpG [Escherichia coli KTE206]
gi|431002340|gb|ELD17853.1| rhomboid protease glpG [Escherichia coli KTE208]
gi|431013895|gb|ELD27617.1| rhomboid protease glpG [Escherichia coli KTE212]
gi|431018328|gb|ELD31764.1| rhomboid protease glpG [Escherichia coli KTE213]
gi|431047845|gb|ELD57830.1| rhomboid protease glpG [Escherichia coli KTE228]
gi|431067167|gb|ELD75776.1| rhomboid protease glpG [Escherichia coli KTE235]
gi|431081148|gb|ELD87927.1| rhomboid protease glpG [Escherichia coli KTE47]
gi|431090385|gb|ELD96154.1| rhomboid protease glpG [Escherichia coli KTE51]
gi|431104933|gb|ELE09297.1| rhomboid protease glpG [Escherichia coli KTE55]
gi|431112744|gb|ELE16426.1| rhomboid protease glpG [Escherichia coli KTE56]
gi|431114845|gb|ELE18372.1| rhomboid protease glpG [Escherichia coli KTE57]
gi|431117926|gb|ELE21150.1| rhomboid protease glpG [Escherichia coli KTE58]
gi|431128483|gb|ELE30667.1| rhomboid protease glpG [Escherichia coli KTE62]
gi|431137623|gb|ELE39468.1| rhomboid protease glpG [Escherichia coli KTE66]
gi|431160921|gb|ELE61422.1| rhomboid protease glpG [Escherichia coli KTE77]
gi|431167454|gb|ELE67719.1| rhomboid protease glpG [Escherichia coli KTE80]
gi|431177727|gb|ELE77641.1| rhomboid protease glpG [Escherichia coli KTE83]
gi|431197212|gb|ELE96078.1| rhomboid protease glpG [Escherichia coli KTE111]
gi|431197789|gb|ELE96616.1| rhomboid protease glpG [Escherichia coli KTE116]
gi|431208294|gb|ELF06516.1| rhomboid protease glpG [Escherichia coli KTE119]
gi|431219674|gb|ELF17068.1| rhomboid protease glpG [Escherichia coli KTE156]
gi|431235995|gb|ELF31209.1| rhomboid protease glpG [Escherichia coli KTE161]
gi|431240836|gb|ELF35284.1| rhomboid protease glpG [Escherichia coli KTE171]
gi|431252494|gb|ELF46009.1| rhomboid protease glpG [Escherichia coli KTE8]
gi|431260576|gb|ELF52673.1| rhomboid protease glpG [Escherichia coli KTE9]
gi|431289297|gb|ELF80038.1| rhomboid protease glpG [Escherichia coli KTE43]
gi|431299888|gb|ELF89454.1| rhomboid protease glpG [Escherichia coli KTE22]
gi|431322188|gb|ELG09776.1| rhomboid protease glpG [Escherichia coli KTE50]
gi|431324143|gb|ELG11599.1| rhomboid protease glpG [Escherichia coli KTE54]
gi|431324819|gb|ELG12235.1| rhomboid protease glpG [Escherichia coli KTE59]
gi|431335300|gb|ELG22440.1| rhomboid protease glpG [Escherichia coli KTE65]
gi|431337101|gb|ELG24195.1| rhomboid protease glpG [Escherichia coli KTE78]
gi|431346128|gb|ELG33041.1| rhomboid protease glpG [Escherichia coli KTE84]
gi|431349354|gb|ELG36195.1| rhomboid protease glpG [Escherichia coli KTE79]
gi|431365589|gb|ELG52094.1| rhomboid protease glpG [Escherichia coli KTE118]
gi|431378834|gb|ELG63825.1| rhomboid protease glpG [Escherichia coli KTE123]
gi|431386439|gb|ELG70395.1| rhomboid protease glpG [Escherichia coli KTE140]
gi|431402212|gb|ELG85525.1| rhomboid protease glpG [Escherichia coli KTE146]
gi|431414090|gb|ELG96839.1| rhomboid protease glpG [Escherichia coli KTE158]
gi|431418188|gb|ELH00602.1| rhomboid protease glpG [Escherichia coli KTE154]
gi|431423638|gb|ELH05764.1| rhomboid protease glpG [Escherichia coli KTE192]
gi|431436044|gb|ELH17651.1| rhomboid protease glpG [Escherichia coli KTE190]
gi|431464843|gb|ELH44961.1| rhomboid protease glpG [Escherichia coli KTE197]
gi|431470453|gb|ELH50375.1| rhomboid protease glpG [Escherichia coli KTE202]
gi|431502780|gb|ELH81665.1| rhomboid protease glpG [Escherichia coli KTE218]
gi|431510447|gb|ELH88692.1| rhomboid protease glpG [Escherichia coli KTE227]
gi|431521542|gb|ELH98787.1| rhomboid protease glpG [Escherichia coli KTE229]
gi|431527549|gb|ELI04264.1| rhomboid protease glpG [Escherichia coli KTE105]
gi|431540799|gb|ELI16253.1| rhomboid protease glpG [Escherichia coli KTE109]
gi|431562526|gb|ELI35828.1| rhomboid protease glpG [Escherichia coli KTE120]
gi|431567174|gb|ELI40187.1| rhomboid protease glpG [Escherichia coli KTE122]
gi|431578706|gb|ELI51299.1| rhomboid protease glpG [Escherichia coli KTE125]
gi|431579850|gb|ELI52421.1| rhomboid protease glpG [Escherichia coli KTE128]
gi|431583912|gb|ELI55900.1| rhomboid protease glpG [Escherichia coli KTE129]
gi|431594196|gb|ELI64479.1| rhomboid protease glpG [Escherichia coli KTE131]
gi|431598307|gb|ELI68103.1| rhomboid protease glpG [Escherichia coli KTE133]
gi|431631360|gb|ELI99672.1| rhomboid protease glpG [Escherichia coli KTE153]
gi|431639295|gb|ELJ07158.1| rhomboid protease glpG [Escherichia coli KTE157]
gi|431670998|gb|ELJ37289.1| rhomboid protease glpG [Escherichia coli KTE176]
gi|431674556|gb|ELJ40717.1| rhomboid protease glpG [Escherichia coli KTE177]
gi|431684222|gb|ELJ49834.1| rhomboid protease glpG [Escherichia coli KTE179]
gi|431684574|gb|ELJ50180.1| rhomboid protease glpG [Escherichia coli KTE180]
gi|431689424|gb|ELJ54931.1| rhomboid protease glpG [Escherichia coli KTE232]
gi|431698382|gb|ELJ63431.1| rhomboid protease glpG [Escherichia coli KTE82]
gi|431702773|gb|ELJ67568.1| rhomboid protease glpG [Escherichia coli KTE85]
gi|431716763|gb|ELJ80869.1| rhomboid protease glpG [Escherichia coli KTE95]
gi|441715117|emb|CCQ04897.1| GlpG protein (membrane protein of glp regulon) [Escherichia coli
Nissle 1917]
gi|449315440|gb|EMD05583.1| intramembrane serine protease GlpG [Escherichia coli S17]
Length = 276
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T ++I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 97 TWVMMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLL 156
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ ALL ++ Q G S
Sbjct: 157 WWWYLGGAVEKRLGSGKLIVIT-----------LISALLSGYVQ----QKFSGPWFGGLS 201
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 202 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFD-----LFGMSMANGA--- 253
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 254 HIAGLAVGLAMAF 266
>gi|432638627|ref|ZP_19874492.1| rhomboid protease glpG [Escherichia coli KTE81]
gi|431168949|gb|ELE69181.1| rhomboid protease glpG [Escherichia coli KTE81]
Length = 276
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T ++I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 97 TWVMMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLL 156
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ ALL ++ Q G S
Sbjct: 157 WWWYLGGAVEKRLGSGKLIVIT-----------LISALLSGYVQ----QKFSGPWFGGLS 201
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 202 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFD-----LFGMSMANGA--- 253
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 254 HIAGLAVGLAMAF 266
>gi|379014757|ref|YP_005290993.1| putative rhomboid family protein, truncated, partial
[Staphylococcus aureus subsp. aureus VC40]
gi|374363454|gb|AEZ37559.1| putative rhomboid family protein, truncated [Staphylococcus aureus
subsp. aureus VC40]
Length = 423
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 27/187 (14%)
Query: 30 VIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSLLHVLFNM 84
+I + +C++ ++F ++ L + F V YR TS+ H S H+L NM
Sbjct: 163 IIFVNVLIWLCMILYLNNFSDVKLLDVGGLVHFNVVHGEWYRIVTSMFLHFSFEHILMNM 222
Query: 85 LALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGF 144
L+L G +E I+GS RM + IA L + F L ++G
Sbjct: 223 LSLFIFGKIVEAIIGSWRMLTV------------YFIAGLFGN--FVSLSFNTTTISVGA 268
Query: 145 SGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGI 201
SG IF L I +S ++ + G I L++LV + M+N++++ H+ G
Sbjct: 269 SGAIFGLIGSIFAMMYVSKTFNKKMLGQLLI-----ALVILVGVSLFMSNINIVAHIGGF 323
Query: 202 LSGFAYT 208
+ G T
Sbjct: 324 IGGLLIT 330
>gi|89099189|ref|ZP_01172067.1| hypothetical protein B14911_07900 [Bacillus sp. NRRL B-14911]
gi|89086035|gb|EAR65158.1| hypothetical protein B14911_07900 [Bacillus sp. NRRL B-14911]
Length = 522
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 34/56 (60%)
Query: 65 YRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLL 120
+RF+T IV H LLH++ N LAL LG+ +ERI GS R +I IL A+ L
Sbjct: 234 WRFFTPIVLHIGLLHLIMNTLALYYLGTAVERIYGSTRFLFIYILAGFMGALASFL 289
>gi|432394004|ref|ZP_19636825.1| rhomboid protease glpG [Escherichia coli KTE21]
gi|430914882|gb|ELC35970.1| rhomboid protease glpG [Escherichia coli KTE21]
Length = 276
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T ++I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 97 TWVMMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLL 156
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ ALL ++ Q G S
Sbjct: 157 WWWYLGGAVEKRLGSGKLIVIT-----------LISALLSGYVQ----QKFSGPWFGGLS 201
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 202 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFD-----LFGMSMANGA--- 253
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 254 HIAGLAVGLAMAF 266
>gi|375011800|ref|YP_004988788.1| hypothetical protein [Owenweeksia hongkongensis DSM 17368]
gi|359347724|gb|AEV32143.1| putative membrane protein [Owenweeksia hongkongensis DSM 17368]
Length = 251
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 20 ESIPFFTSAVVIVCGTIYLICLLFGYDSFYEIC-----FLPSAVISRFQVYRFYTSIVFH 74
+ +P ++I+ G +L ++ G + +++ +LP + FQ Y+ T I H
Sbjct: 9 KMLPDVIKNLLIINGLFFLATVVLGNVAGFDLVQTLGLYLPGS--PHFQPYQVITHIFMH 66
Query: 75 GSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHL 119
G+L H+ FNM AL G LE + GS R ++ A++HL
Sbjct: 67 GNLTHIFFNMFALWMFGYTLENVWGSKRFLIYYMITGLGAAVIHL 111
>gi|50123058|ref|YP_052225.1| intramembrane serine protease GlpG [Pectobacterium atrosepticum
SCRI1043]
gi|49613584|emb|CAG77035.1| putative membrane protein [Pectobacterium atrosepticum SCRI1043]
Length = 277
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 88/185 (47%), Gaps = 23/185 (12%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
T +V++V ++++ + GY+S P A + Q++R+++ + H SLLH+LFN+
Sbjct: 98 LTLSVMVVTIAVFILMQISGYESVMTWLAFP-AEGQQLQLWRWFSHALLHFSLLHILFNL 156
Query: 85 LALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGF 144
+ LG +E+++G+ ++ L+IAL+ A + + G
Sbjct: 157 MWWWYLGGPVEKVLGTGKL---------------LVIALVSALVSGWAQSWCSGTYFGGL 201
Query: 145 SGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVL----FQVLMTNVSLLGHLCG 200
SGV+++L+ L G R G ++P LL L F +L +++ H+ G
Sbjct: 202 SGVVYALMGY-VWLRG--EREPDGYLSMPRSLMAFALLWLVAGYFDILGMSIANAAHVAG 258
Query: 201 ILSGF 205
++ G
Sbjct: 259 LIVGL 263
>gi|420323145|ref|ZP_14824961.1| rhomboid protease glpG [Shigella flexneri 2850-71]
gi|391244095|gb|EIQ03382.1| rhomboid protease glpG [Shigella flexneri 2850-71]
Length = 276
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T ++I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 97 TWVMMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLL 156
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ ALL ++ Q G S
Sbjct: 157 WWWYLGGAVEKRLGSGKLIVIT-----------LISALLSGYVQ----QKFSGPWFGGLS 201
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 202 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFD-----LFGMSMANGA--- 253
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 254 HIAGLAVGLAMAF 266
>gi|293416826|ref|ZP_06659463.1| rhomboid protease glpG [Escherichia coli B185]
gi|291431402|gb|EFF04387.1| rhomboid protease glpG [Escherichia coli B185]
Length = 276
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T ++I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 97 TWVMMIACVVVFIAMQILGDQEVMLWLAWPFDPALKFEFWRYFTHALMHFSLMHILFNLL 156
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ ALL ++ Q G S
Sbjct: 157 WWWYLGGAVEKRLGSGKLIVIT-----------LISALLSGYVQ----QKFSGPWFGGLS 201
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 202 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFD-----LFGMSMANGA--- 253
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 254 HIAGLAVGLAMAF 266
>gi|309785831|ref|ZP_07680462.1| rhomboid family protein [Shigella dysenteriae 1617]
gi|308926951|gb|EFP72427.1| rhomboid family protein [Shigella dysenteriae 1617]
Length = 276
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T ++I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 97 TWVMMIACVVVFIAMQILGDQEVMLWLAWPFDPALKFEFWRYFTHALMHFSLMHILFNLL 156
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ ALL ++ Q G S
Sbjct: 157 WWWYLGGAVEKRLGSGKLIVIT-----------LISALLSGYVQ----QKFSGPWFGGLS 201
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 202 GVVYALMGYVWLHGERDPQSGIYLQRGLIIFALIWIVAGWFD-----LFGMSMANGA--- 253
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 254 HIAGLAVGLAMAF 266
>gi|188494688|ref|ZP_03001958.1| peptidase, S54 family [Escherichia coli 53638]
gi|188489887|gb|EDU64990.1| peptidase, S54 family [Escherichia coli 53638]
Length = 276
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T ++I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 97 TWVMMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLL 156
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ ALL ++ Q G S
Sbjct: 157 WWWYLGGAVEKRLGSGKLIVIT-----------LISALLSGYVQ----QKFSGPWFGGLS 201
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 202 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFD-----LFGMSMANGA--- 253
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 254 HIAGLAVGLAMAF 266
>gi|415838999|ref|ZP_11520817.1| rhomboid family protein [Escherichia coli RN587/1]
gi|425279801|ref|ZP_18671025.1| rhomboid protease glpG [Escherichia coli ARS4.2123]
gi|323188986|gb|EFZ74270.1| rhomboid family protein [Escherichia coli RN587/1]
gi|408198693|gb|EKI23916.1| rhomboid protease glpG [Escherichia coli ARS4.2123]
Length = 276
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T ++I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 97 TWMMMIACVVVFITMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLL 156
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ ALL ++ Q G S
Sbjct: 157 WWWYLGGAVEKRLGSGKLIVIT-----------LISALLSGYVQ----QKFSGPWFGGLS 201
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 202 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFD-----LFGMSMANGA--- 253
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 254 HIAGLAVGLAMAF 266
>gi|440908443|gb|ELR58457.1| Rhomboid domain-containing protein 2 [Bos grunniens mutus]
Length = 360
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 76/160 (47%), Gaps = 9/160 (5%)
Query: 54 LPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATS 113
L S + +QVYR T I + + + +L + + ER +G+VR + T++
Sbjct: 46 LRSEALRNWQVYRLVTYIFVYENPVSLLCGAIVIWRFAGNFERTVGTVRHCFFTVVFTII 105
Query: 114 NAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIP 173
AI+ L + + +L V D A GF+ V F+++ + S + VFG+ +P
Sbjct: 106 CAIIFLSFEAVSS---LSKLGEVED--ARGFTPVAFAMLGVNCVRSRMRRALVFGVV-VP 159
Query: 174 AKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAY--TYGF 211
+ P +LL L+ S L ++CG+ G AY TY F
Sbjct: 160 SLLVPWLLLCA-SWLIPQTSFLSNVCGLGIGLAYGLTYCF 198
>gi|420393523|ref|ZP_14892768.1| rhomboid family protein [Escherichia coli EPEC C342-62]
gi|391310364|gb|EIQ68019.1| rhomboid family protein [Escherichia coli EPEC C342-62]
Length = 274
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 83/193 (43%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T V+I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 95 TWVVMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLL 154
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ ALL ++ Q G S
Sbjct: 155 WWWYLGGAVEKRLGSGKLIVIT-----------LISALLSGYVQ----QKFSGPWFGGLS 199
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV ++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 200 GVAYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFD-----LFGMSMANGA--- 251
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 252 HIAGLAVGLAMAF 264
>gi|30065293|ref|NP_839464.1| intramembrane serine protease GlpG [Shigella flexneri 2a str.
2457T]
gi|56480337|ref|NP_709199.2| intramembrane serine protease GlpG [Shigella flexneri 2a str. 301]
gi|30043555|gb|AAP19275.1| protein of glp regulon [Shigella flexneri 2a str. 2457T]
gi|56383888|gb|AAN44906.2| protein of glp regulon [Shigella flexneri 2a str. 301]
Length = 274
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 82/193 (42%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T ++I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 95 TWVMMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLL 154
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ A + Y Q G S
Sbjct: 155 WWWYLGGAVEKRLGSGKLIVIT---------------LISALLSGYMQQKFSGPWFGGLS 199
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 200 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFD-----LFGMSMANGA--- 251
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 252 HIAGLAVGLAMAF 264
>gi|444354322|ref|YP_007390466.1| GlpG protein (membrane protein of glp regulon) [Enterobacter
aerogenes EA1509E]
gi|443905152|emb|CCG32926.1| GlpG protein (membrane protein of glp regulon) [Enterobacter
aerogenes EA1509E]
Length = 276
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 48/87 (55%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
FT A+++ C ++++ + G + P +F+ +R+ T H SL+H+LFN+
Sbjct: 96 FTWAILLACILVFILQNVLGDQTMMIWLAWPYDPSLKFEAWRYLTHAFMHFSLMHILFNL 155
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
L LG +E+ +GS ++ ITI+ A
Sbjct: 156 LWWWYLGGAVEKRIGSGKLVVITIISA 182
>gi|403385795|ref|ZP_10927852.1| hypothetical protein KJC30_13905 [Kurthia sp. JC30]
Length = 206
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 71/143 (49%), Gaps = 17/143 (11%)
Query: 63 QVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIA 122
+ +R T+I HG LH+L NM L G ELE+I G R +I L++
Sbjct: 56 EYWRLVTAIFIHGGFLHILSNMFWLYVFGPELEKIAGRARFIFI------------FLMS 103
Query: 123 LLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILL 182
++ ++ Y +Q+ + ++G SG +F ++ +L +R +F + PL+++
Sbjct: 104 GIIGNVATYFVQD-LGYVSVGASGAVFGMLGAYLALV-YYTRHIFP--QLRQMILPLVII 159
Query: 183 -VLFQVLMTNVSLLGHLCGILSG 204
V+ L NV+ H+ G+++G
Sbjct: 160 SVIITFLQPNVNATAHIAGLITG 182
>gi|417141370|ref|ZP_11984283.1| rhomboid protease GlpG [Escherichia coli 97.0259]
gi|417309923|ref|ZP_12096750.1| Rhomboid protease glpG [Escherichia coli PCN033]
gi|422974074|ref|ZP_16976171.1| rhomboid protease glpG [Escherichia coli TA124]
gi|432870910|ref|ZP_20091330.1| rhomboid protease glpG [Escherichia coli KTE147]
gi|338768528|gb|EGP23321.1| Rhomboid protease glpG [Escherichia coli PCN033]
gi|371596051|gb|EHN84894.1| rhomboid protease glpG [Escherichia coli TA124]
gi|386155860|gb|EIH12210.1| rhomboid protease GlpG [Escherichia coli 97.0259]
gi|431408895|gb|ELG92077.1| rhomboid protease glpG [Escherichia coli KTE147]
Length = 276
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T ++I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 97 TWVMMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLL 156
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ ALL ++ Q G S
Sbjct: 157 WWWYLGGAVEKRLGSGKLIVIT-----------LISALLSGYVQ----QKFSGPWFGGLS 201
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 202 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFD-----LFGMSMANGA--- 253
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 254 HIAGLAVGLAMAF 266
>gi|422807341|ref|ZP_16855771.1| rhomboid family protein [Escherichia fergusonii B253]
gi|324111736|gb|EGC05716.1| rhomboid family protein [Escherichia fergusonii B253]
Length = 276
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T ++I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 97 TWVMMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLL 156
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ ALL ++ Q G S
Sbjct: 157 WWWYLGGTVEKRLGSGKLIVIT-----------LISALLSGYVQ----QKFSGPWFGGLS 201
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 202 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFD-----LFGMSMANGA--- 253
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 254 HIAGLAVGLAMAF 266
>gi|418459787|ref|ZP_13030898.1| membrane protein [Saccharomonospora azurea SZMC 14600]
gi|359740100|gb|EHK88949.1| membrane protein [Saccharomonospora azurea SZMC 14600]
Length = 267
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 70/158 (44%), Gaps = 21/158 (13%)
Query: 48 FYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYIT 107
F + P AV+ + +R TS H L+H+ NMLAL LG +LE ++G VR +
Sbjct: 75 FADGVLWPEAVVVLDEWWRLLTSGFLHYGLIHLAMNMLALWVLGRDLEMLLGRVRFVALY 134
Query: 108 ILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVF 167
L + A D G SG I+ L+ GA +V
Sbjct: 135 FL-------------SMFAGGAAVFAFGAADTGTAGASGAIYGLM-------GAILVAVL 174
Query: 168 GLFNIPAKWYPLILL-VLFQVLMTNVSLLGHLCGILSG 204
L P +I+L V+ V + N+SLLGHL G+++G
Sbjct: 175 RLRLNPTTAIGIIVLNVILSVSIPNISLLGHLGGLVAG 212
>gi|440804402|gb|ELR25279.1| Der1like domain family, member 1, putative [Acanthamoeba
castellanii str. Neff]
Length = 233
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 35/236 (14%)
Query: 11 LSTRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTS 70
+S+ +WW+ +P T + + + L FG S Y + + +I+ FQ++R T
Sbjct: 1 MSSDLERWWKDLPVLTKYLFVGSFGVTLAAN-FGLLSPYSLVLIWPKIITEFQLWRLVTC 59
Query: 71 IVFHGSLLHVLFNMLALVPLGSEL--ERIMGSVRMFYITI-LLATSNAILH---LLIALL 124
+FHG L + + L SE+ R+ V M IT LL S IL L + L+
Sbjct: 60 FLFHGKLGFPFLIHMLFLSLESEIFNGRLSDYVWMQVITCSLLLASTLILPSPILGMGLI 119
Query: 125 VAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVL 184
V+ I ++ +N E ++ F G + +S++ +P +L +
Sbjct: 120 VSLIYYWSRKNPDVEMSLMF---------------GIRFKSIY---------FPWVLCAM 155
Query: 185 FQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKF 240
L+ S L LCGI++G + Y FF ++P T Y +++ + + I ++
Sbjct: 156 --SLLMGGSPLAELCGIVAG--HFYFFFEDIIPRTKGYRLLQTPAFMYVSIDPAEY 207
>gi|399526757|ref|ZP_10766509.1| peptidase, S54 family [Actinomyces sp. ICM39]
gi|398362686|gb|EJN46363.1| peptidase, S54 family [Actinomyces sp. ICM39]
Length = 290
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 75/164 (45%), Gaps = 16/164 (9%)
Query: 65 YRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALL 124
+ T HG LLH+LFNML+L +G +E +MG R ++T+ L ++ +IA
Sbjct: 111 WTILTGAFLHGGLLHILFNMLSLYWVGRAIEPVMGWWR--FLTVYLVSALGGSAFIIAWC 168
Query: 125 VAHIPFYRLQNVMDECAI-GFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLV 183
+ + V A+ G G +F L L G+ + ++ L + +
Sbjct: 169 LIQPSEIYVSTVGASAAVFGLFGAVFVL----QRLGGSDTTAILTLLGVN---------L 215
Query: 184 LFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIES 227
++ +++ +S GH+ G ++G A T+ + P + A ++
Sbjct: 216 VYGFMVSGISWQGHIGGAIAGVAATWVLVRMARPRSGVTEAAQN 259
>gi|419116946|ref|ZP_13661956.1| rhomboid family protein [Escherichia coli DEC5A]
gi|377958005|gb|EHV21529.1| rhomboid family protein [Escherichia coli DEC5A]
Length = 276
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T ++I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 97 TWVMMIACVVVFIAMQILGDQEVMLWLAWPFDPALKFEFWRYFTHALMHFSLMHILFNLL 156
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ ALL ++ Q G S
Sbjct: 157 WWWYLGGAVEKRLGSGKLIVIT-----------LISALLSGYVQ----QKFSGPWFGGLS 201
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 202 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFD-----LFGMSMANGA--- 253
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 254 HIAGLAVGLAMAF 266
>gi|397566569|gb|EJK45095.1| hypothetical protein THAOC_36308 [Thalassiosira oceanica]
Length = 533
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 70/156 (44%), Gaps = 18/156 (11%)
Query: 59 ISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILH 118
+S Q +R+ +S HGSL+H++ NM ALV L S LE +G I S +
Sbjct: 310 LSHVQRHRYISSSFLHGSLVHIVMNMRALVSLPSWLENGIGKGVYLASYISGVISGNVAS 369
Query: 119 LLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYP 178
L+ V ++ + +G SG I L G S+ + N A WY
Sbjct: 370 TLVN--VGNV------SAASTLCLGCSGGI-------CGLYGLMMASLMKMGNPDAAWYV 414
Query: 179 L---ILLVLFQVLMTNVSLLGHLCGILSGFAYTYGF 211
L I LV+F +++ +S GH+ G + G+ Y F
Sbjct: 415 LKSMIWLVMFGLIIPGISNAGHVGGFIGGWLVGYLF 450
>gi|319651546|ref|ZP_08005673.1| hypothetical protein HMPREF1013_02285 [Bacillus sp. 2_A_57_CT2]
gi|317396613|gb|EFV77324.1| hypothetical protein HMPREF1013_02285 [Bacillus sp. 2_A_57_CT2]
Length = 506
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 84/209 (40%), Gaps = 58/209 (27%)
Query: 23 PFFTSAVVIVCGTIYLICLLFGYDS------FYEICFLPSAVISRFQVYRFYTSIVFHGS 76
PFFT + + ++L+ G + Y F P +I + +RF T IV H
Sbjct: 179 PFFTYIFIFIQVAVFLVLEAMGGSTDTSTLIKYGAKFNP--LILDGEWWRFLTPIVLHIG 236
Query: 77 LLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNV 136
LLH+L N LAL LGS +ER+ G++R +I +
Sbjct: 237 LLHLLMNTLALFYLGSAVERVYGNLRFLFIYL---------------------------- 268
Query: 137 MDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNI--------PAKWYPLILLVLFQVL 188
A GF G + S I T LS S ++FG F P+ ++ I + VL
Sbjct: 269 ----AAGFGGTLASFIFSPT-LSAGASGAIFGCFGALLYFGLIYPSLFFRTIGFNIIVVL 323
Query: 189 MTNVSL---------LGHLCGILSGFAYT 208
N++ GH+ G++ GF T
Sbjct: 324 GINLAFGFTIPGIDNAGHIGGLIGGFLAT 352
>gi|384544990|ref|YP_005729054.1| Protein of glp regulon [Shigella flexneri 2002017]
gi|415858764|ref|ZP_11533216.1| rhomboid family protein [Shigella flexneri 2a str. 2457T]
gi|417704556|ref|ZP_12353649.1| rhomboid family protein [Shigella flexneri K-218]
gi|417725952|ref|ZP_12374731.1| rhomboid family protein [Shigella flexneri K-304]
gi|417731091|ref|ZP_12379770.1| rhomboid family protein [Shigella flexneri K-671]
gi|417736069|ref|ZP_12384704.1| rhomboid family protein [Shigella flexneri 2747-71]
gi|417740963|ref|ZP_12389528.1| rhomboid family protein [Shigella flexneri 4343-70]
gi|417746010|ref|ZP_12394526.1| rhomboid family protein [Shigella flexneri 2930-71]
gi|418260177|ref|ZP_12882785.1| rhomboid family protein [Shigella flexneri 6603-63]
gi|420344527|ref|ZP_14845983.1| rhomboid protease glpG [Shigella flexneri K-404]
gi|172046618|sp|Q83PV6.5|GLPG_SHIFL RecName: Full=Rhomboid protease GlpG; AltName: Full=Intramembrane
serine protease
gi|281602777|gb|ADA75761.1| Protein of glp regulon [Shigella flexneri 2002017]
gi|313647274|gb|EFS11726.1| rhomboid family protein [Shigella flexneri 2a str. 2457T]
gi|332749474|gb|EGJ79891.1| rhomboid family protein [Shigella flexneri K-671]
gi|332750320|gb|EGJ80731.1| rhomboid family protein [Shigella flexneri 4343-70]
gi|332751265|gb|EGJ81668.1| rhomboid family protein [Shigella flexneri 2747-71]
gi|332763589|gb|EGJ93828.1| rhomboid family protein [Shigella flexneri 2930-71]
gi|332997080|gb|EGK16696.1| rhomboid family protein [Shigella flexneri K-218]
gi|333012545|gb|EGK31926.1| rhomboid family protein [Shigella flexneri K-304]
gi|391261212|gb|EIQ20261.1| rhomboid protease glpG [Shigella flexneri K-404]
gi|397893708|gb|EJL10163.1| rhomboid family protein [Shigella flexneri 6603-63]
Length = 276
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 82/193 (42%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T ++I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 97 TWVMMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLL 156
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ A + Y Q G S
Sbjct: 157 WWWYLGGAVEKRLGSGKLIVIT---------------LISALLSGYMQQKFSGPWFGGLS 201
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 202 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFD-----LFGMSMANGA--- 253
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 254 HIAGLAVGLAMAF 266
>gi|269954822|ref|YP_003324611.1| Rhomboid family protein [Xylanimonas cellulosilytica DSM 15894]
gi|269303503|gb|ACZ29053.1| Rhomboid family protein [Xylanimonas cellulosilytica DSM 15894]
Length = 282
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 71/164 (43%), Gaps = 27/164 (16%)
Query: 53 FLPSAVISRFQVYRFYTSIVFH--GSLLHVLFNMLALVPLGSELERIMGSVRMFYITILL 110
F+ + V+ + +RF T+ H G H+LFNM AL G LE ++G R + +L
Sbjct: 104 FMYAPVLGVGEPFRFLTAAFLHSTGFFGHILFNMWALYVTGQFLEPVLGRARFIALCVLS 163
Query: 111 ATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSL---IVIETSLSGAQSRSVF 167
A ++ LL+A V + +G SG++F L +V G + +
Sbjct: 164 AIGGSVAVLLLASPV-------------QAVVGASGMVFGLFGAMVPVLRRLGGNAAQII 210
Query: 168 GLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGF 211
GL I + L+ +S GHL G++ G A Y F
Sbjct: 211 GLIAING---------VIGFLVPGISWQGHLGGLVVGLALGYAF 245
>gi|32472115|ref|NP_865109.1| glpG protein [Rhodopirellula baltica SH 1]
gi|32397487|emb|CAD72793.1| probable glpG protein [Rhodopirellula baltica SH 1]
Length = 340
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 56/93 (60%), Gaps = 11/93 (11%)
Query: 59 ISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILH 118
I + +++R T HGS +H++FNM+AL LGS +ER+ GS F ++LLA+ H
Sbjct: 195 IKKGEIWRLVTPAFLHGSTMHLVFNMMALFTLGSVVERLHGS--WFLGSLLLAS-----H 247
Query: 119 LLIALLVAHIPFYRLQNVMDECAIGFSGVIFSL 151
++ ++ +P + L++ M A+G SG +F +
Sbjct: 248 IIGMIVQVVLPDW-LESPM---AVGASGAVFGV 276
>gi|418327645|ref|ZP_12938790.1| peptidase, S54 family [Staphylococcus epidermidis 14.1.R1.SE]
gi|365232769|gb|EHM73752.1| peptidase, S54 family [Staphylococcus epidermidis 14.1.R1.SE]
Length = 234
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 82/183 (44%), Gaps = 27/183 (14%)
Query: 30 VIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSLLHVLFNM 84
+I+ + +C++ + F ++ L + F V YR +S+ H + H+L NM
Sbjct: 38 LILINIVIWLCMILYLNRFSDVKLLEVGGLVHFNVVHGEWYRLISSMFLHFNFEHILMNM 97
Query: 85 LALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGF 144
L+L G +E I+GS RM I I+ F L ++G
Sbjct: 98 LSLFIFGKIVESIIGSWRMLIIYIISGLYG--------------NFVSLSFNTSTISVGA 143
Query: 145 SGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGI 201
SG IF L I + LS ++ + G I L++L+ F + M+N++++ HL G
Sbjct: 144 SGAIFGLIGSIFVIMYLSKNFNKKMIGQLLI-----ALVVLIGFSLFMSNINIMAHLGGF 198
Query: 202 LSG 204
+SG
Sbjct: 199 ISG 201
>gi|291390907|ref|XP_002711953.1| PREDICTED: rhomboid domain containing 2 [Oryctolagus cuniculus]
Length = 364
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 74/152 (48%), Gaps = 7/152 (4%)
Query: 56 SAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNA 115
S + +Q+YR T I + + + +L + + ER +G+VR + T++ +A
Sbjct: 52 SEALRNWQIYRLVTYIFVYENPVSLLCGAIVIWRFAGNFERTVGTVRHCFFTLIFTVFSA 111
Query: 116 ILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAK 175
I+ L + + +L V D A GF+ V F+++ + + S + VFG+ +P+
Sbjct: 112 IIFLSFEAVSS---LSKLGEVED--ARGFTPVAFAMLGVTSVRSRVRRALVFGVV-VPSG 165
Query: 176 WYPLILLVLFQVLMTNVSLLGHLCGILSGFAY 207
P +LL L+ S L ++CG+ G AY
Sbjct: 166 LVPWLLLGA-SWLIPQTSFLSNVCGLAIGLAY 196
>gi|344201594|ref|YP_004786737.1| peptidase S54, rhomboid domain-containing protein [Muricauda
ruestringensis DSM 13258]
gi|343953516|gb|AEM69315.1| Peptidase S54, rhomboid domain protein [Muricauda ruestringensis
DSM 13258]
Length = 244
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 29 VVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALV 88
++I+ ++L L+G D Y+ L S F+ ++ T + HG+ +H+LFNM AL
Sbjct: 11 ILIINVIMFLATQLYG-DQMYQWMSLWFPKNSNFEWWQVVTHMFMHGNFMHILFNMYALW 69
Query: 89 PLGSELERIMGSVRMFYITILLATSNAILH 118
G+ LERI G + + +A LH
Sbjct: 70 AFGTPLERIWGRNKFLFFYFSAGLGSAALH 99
>gi|336247568|ref|YP_004591278.1| intramembrane serine protease GlpG [Enterobacter aerogenes KCTC
2190]
gi|334733624|gb|AEG95999.1| intramembrane serine protease GlpG [Enterobacter aerogenes KCTC
2190]
Length = 276
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 48/87 (55%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
FT A+++ C ++++ + G + P +F+ +R+ T H SL+H+LFN+
Sbjct: 96 FTWAILLACILVFILQNVLGDQTMMIWLAWPYDPSLKFEAWRYLTHAFMHFSLMHILFNL 155
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
L LG +E+ +GS ++ ITI+ A
Sbjct: 156 LWWWYLGGAVEKRIGSGKLVVITIISA 182
>gi|291619247|ref|YP_003521989.1| GlpG [Pantoea ananatis LMG 20103]
gi|378765322|ref|YP_005193781.1| intramembrane serine protease GlpG [Pantoea ananatis LMG 5342]
gi|386017496|ref|YP_005935794.1| protein GlpG [Pantoea ananatis AJ13355]
gi|386077574|ref|YP_005991099.1| Rhomboid protease GlpG [Pantoea ananatis PA13]
gi|291154277|gb|ADD78861.1| GlpG [Pantoea ananatis LMG 20103]
gi|327395576|dbj|BAK12998.1| protein GlpG [Pantoea ananatis AJ13355]
gi|354986755|gb|AER30879.1| Rhomboid protease GlpG [Pantoea ananatis PA13]
gi|365184794|emb|CCF07744.1| intramembrane serine protease GlpG [Pantoea ananatis LMG 5342]
Length = 272
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T V+ C ++++ + G + P A F+++R+++ ++ H SLLH+LFN++
Sbjct: 96 TMVVMFACIAVFVLMQVLGDRTVMYWLAWPDA-DQHFEIWRWFSHVLLHFSLLHILFNLM 154
Query: 86 ALVPLGSELERIMGSVRMFYITILLA 111
LG +E+ +GS ++F I I+ A
Sbjct: 155 WWWYLGGAVEKRLGSGKLFVIFIISA 180
>gi|304382432|ref|ZP_07364931.1| rhomboid family protein [Prevotella marshii DSM 16973]
gi|304336440|gb|EFM02677.1| rhomboid family protein [Prevotella marshii DSM 16973]
Length = 316
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 92/213 (43%), Gaps = 31/213 (14%)
Query: 21 SIPFFTSAVVIVCGTIYLICLLFG-----YDSFYEICFLPSAVISRFQVYRFYTSIVFHG 75
+IP T ++I+ ++L + G + + F P+ S F +Y+ +T + HG
Sbjct: 8 NIPTITKNLLIINVLVFLAAYVLGIRGIDLNGLLGLHFFPA---SHFGIYQLFTYLFMHG 64
Query: 76 SLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAIL---------HLLIALLVA 126
H+ FNM AL G +E G + + I +L ++LI+ A
Sbjct: 65 GWAHLFFNMFALWMFGCVVENAWGPKKFLFYYIACGVGAGLLQEVAQFVQFYVLISDQYA 124
Query: 127 HIPFYRLQNVMDECA--------IGFSGVIFSLIVIETSLSGAQSRSVFGL-FNIPAKWY 177
+ F + ++ + +G SG ++ +++ + Q VF L I AKW+
Sbjct: 125 GVSFSDVFHIAQSMSSQLNGWTTVGASGAVYGILLAFGMIYPEQRIFVFPLPIPIKAKWF 184
Query: 178 PLIL--LVLFQVLMTN---VSLLGHLCGILSGF 205
+I + LF L T+ V+ HL G+L G+
Sbjct: 185 VMIYAGIELFSALGTSSDGVAHFAHLGGMLFGY 217
>gi|298706212|emb|CBJ29253.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 269
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 72/161 (44%), Gaps = 27/161 (16%)
Query: 57 AVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAI 116
A+ + Q YR T IV HGS H+ N ++ +G +ER+MG + + L + +
Sbjct: 90 AITQQGQWYRLLTPIVLHGSFTHLAVNSMSFSSVGPVVERVMGKAKFVTVYTLAGIAGNV 149
Query: 117 LHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLI--------VIETSLSGAQSRSVFG 168
L ++ P ++G SG IF ++ + ET L ++ S
Sbjct: 150 LSCIVN---PRTP-----------SVGASGAIFGMVGAWGAFCLMNETVL--GRNNSQRA 193
Query: 169 LFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTY 209
L N+ +++ V++ + + + +GHL G L G A T+
Sbjct: 194 LRNVAQT---VMINVVYGMGSSQIDNMGHLGGFLGGAAMTF 231
>gi|291455745|ref|ZP_06595135.1| peptidase, S54 family [Bifidobacterium breve DSM 20213 = JCM 1192]
gi|291382673|gb|EFE90191.1| peptidase, S54 family [Bifidobacterium breve DSM 20213 = JCM 1192]
Length = 246
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 104/250 (41%), Gaps = 31/250 (12%)
Query: 17 QWWESIPFFTSAVVIVCGTIYLICLLFGYDS-------FYEICFLPSAVISRFQVYRFYT 69
QW P T A++ C ++L+ +L G+ S Y P+ +++ + + T
Sbjct: 12 QWERGGPVMTWALIAACTAVWLVEVLLGFLSPTLQNWLIYRGMLAPATMLA--EPWAIVT 69
Query: 70 SIVFHG--SLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAH 127
S+ H S+LH+LFNM+AL +G LER++G R + ++ A+ ++ A++
Sbjct: 70 SMFLHAPNSILHILFNMIALYSVGPVLERLIGHWRFLGLYMISGLGGALGMMVWAVVAPG 129
Query: 128 IPFYRLQNVMDECAIGFSGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVL 184
A G SG +F L +++ GA RS+ W + +
Sbjct: 130 ------GQSWQTAAYGASGALFGLFAALLVVYRRIGADIRSML-------IWMAVNFALP 176
Query: 185 FQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMP--GTSFYSAIESSSLLSTCIRQPKFIL 242
F V V+ H+ G + G T+ + P G S ++ T + +
Sbjct: 177 FVV--GGVAWQAHVGGFVVGGLLTWLLIGGIRPWRGKSLAWRMQVYGWSVTVLVIALIVA 234
Query: 243 CTGGNPSGYI 252
C NP G++
Sbjct: 235 CNFANPYGWM 244
>gi|164448564|ref|NP_001039943.2| rhomboid domain-containing protein 2 [Bos taurus]
gi|296472983|tpg|DAA15098.1| TPA: rhomboid domain containing 2 [Bos taurus]
Length = 364
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 76/160 (47%), Gaps = 9/160 (5%)
Query: 54 LPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATS 113
L S + +QVYR T I + + + +L + + ER +G+VR + T++
Sbjct: 50 LRSEALRNWQVYRLVTYIFVYENPVSLLCGAIVIWRFAGNFERTVGTVRHCFFTVVFTII 109
Query: 114 NAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIP 173
AI+ L + + +L V D A GF+ V F+++ + S + VFG+ +P
Sbjct: 110 CAIIFLSFEAVSS---LSKLGEVED--ARGFTPVAFAMLGVNCVRSRMRRALVFGVV-VP 163
Query: 174 AKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAY--TYGF 211
+ P +LL L+ S L ++CG+ G AY TY F
Sbjct: 164 SLLVPWLLLCA-SWLIPQTSFLSNVCGLGIGLAYGLTYCF 202
>gi|344289781|ref|XP_003416619.1| PREDICTED: rhomboid domain-containing protein 2 [Loxodonta
africana]
Length = 367
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 77/154 (50%), Gaps = 7/154 (4%)
Query: 54 LPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATS 113
L S + +QVYR T I + + + +L + + ER +G+VR + T++
Sbjct: 53 LRSEALRSWQVYRLVTYIFVYENPVSLLCGAVIIWRFAGSFERSVGTVRHCFFTLVFTVI 112
Query: 114 NAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIP 173
+AI++L + + +L V D A GF+ V F+++ + + S + VFG+ +P
Sbjct: 113 SAIIYLSFEAVSS---LTKLGEVED--ARGFTPVAFAMLGVSSVRSRMRRALVFGVV-VP 166
Query: 174 AKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAY 207
+ P +LL + L+ S L ++CG++ G Y
Sbjct: 167 SVLVPWLLLGI-SWLIPQTSFLSNVCGLVIGLTY 199
>gi|343507028|ref|ZP_08744478.1| protein GlpG [Vibrio ichthyoenteri ATCC 700023]
gi|342800662|gb|EGU36175.1| protein GlpG [Vibrio ichthyoenteri ATCC 700023]
Length = 274
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 84/188 (44%), Gaps = 25/188 (13%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
FT A++ +C I+++ S + P+ +Q++R+ + + H S++H+ FN+
Sbjct: 99 FTLAIMAICSVIFILQQFGAGQSVFNALHFPAFAGQEWQIWRWVSHALLHFSIMHIAFNL 158
Query: 85 LALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAI-- 142
L LG ++E+ +GS ++ + + A + I + E A
Sbjct: 159 LWWWQLGGDIEQRLGSGKLIQLFVFSAALSGIGQFWV-----------------EGANFG 201
Query: 143 GFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVL-----FQVLMTNVSLLGH 197
G SGV+++L V L G ++ + P + L+ LVL F + L+G
Sbjct: 202 GLSGVVYAL-VGYIWLMGYRAPEKGLMMPKPLIGFMLVWLVLGFVQPFMAIANTAHLVGL 260
Query: 198 LCGILSGF 205
L G++ G+
Sbjct: 261 LAGVMLGW 268
>gi|417942695|ref|ZP_12585960.1| Peptidase, S54 family [Bifidobacterium breve CECT 7263]
gi|376166735|gb|EHS85623.1| Peptidase, S54 family [Bifidobacterium breve CECT 7263]
Length = 246
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 104/250 (41%), Gaps = 31/250 (12%)
Query: 17 QWWESIPFFTSAVVIVCGTIYLICLLFGYDS-------FYEICFLPSAVISRFQVYRFYT 69
QW P T A++ C ++L+ +L G+ S Y P+ +++ + + T
Sbjct: 12 QWEHGGPVMTWALIAACTAVWLVEVLLGFLSPTLQNWLIYRGMLAPATMLA--EPWAIVT 69
Query: 70 SIVFHG--SLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAH 127
S+ H S+LH+LFNM+AL +G LER++G R + ++ A+ ++ A++
Sbjct: 70 SMFLHAPNSILHILFNMIALYSVGPVLERLIGHWRFLGLYMISGLGGALGMMVWAVVAPG 129
Query: 128 IPFYRLQNVMDECAIGFSGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVL 184
A G SG +F L +++ GA RS+ W + +
Sbjct: 130 ------GQGWQTAAYGASGALFGLFAALLVVYRRIGADIRSML-------IWMAVNFALP 176
Query: 185 FQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMP--GTSFYSAIESSSLLSTCIRQPKFIL 242
F V V+ H+ G + G T+ + P G S ++ T + +
Sbjct: 177 FVV--GGVAWQAHVGGFVVGGLLTWLLIGGIRPWRGKSLAWRMQVYGWSVTVLVIALIVA 234
Query: 243 CTGGNPSGYI 252
C NP G++
Sbjct: 235 CNFANPYGWM 244
>gi|420377377|ref|ZP_14876999.1| rhomboid protease glpG, partial [Shigella flexneri 1235-66]
gi|391296308|gb|EIQ54403.1| rhomboid protease glpG, partial [Shigella flexneri 1235-66]
Length = 222
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 82/193 (42%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T ++I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 43 TWVMMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLL 102
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT++ A + Y Q G S
Sbjct: 103 WWWYLGGAVEKRLGSGKLIVITLISALLSG---------------YMQQKFSGPWFGGLS 147
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 148 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFD-----LFGMSMANGA--- 199
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 200 HIAGLAVGLAMAF 212
>gi|388852860|emb|CCF53545.1| uncharacterized protein [Ustilago hordei]
Length = 603
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 53/106 (50%), Gaps = 14/106 (13%)
Query: 50 EICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITIL 109
EIC L A + Q YRF T+I H L+HVLFN+L + L +++E+I+GS+ YI +
Sbjct: 380 EICGLKDAN-NPNQSYRFITAIFVHAGLVHVLFNLLVQLTLCAQIEKIIGSIA--YILVW 436
Query: 110 LATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIE 155
A L + P ++G SG I++ I IE
Sbjct: 437 FAGGVGGNLLGGNFGLIGQP-----------SLGASGAIYTCISIE 471
>gi|297581854|ref|ZP_06943775.1| glpG protein [Vibrio cholerae RC385]
gi|297533948|gb|EFH72788.1| glpG protein [Vibrio cholerae RC385]
Length = 277
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 48/87 (55%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
FT ++ +C I+ + D+ + P+ ++Q++R+ + + H S++H+ FN+
Sbjct: 99 FTLFIMALCIIIFTLQTFGAGDAVFNALHFPALAGQQWQIWRWVSHALLHFSVMHIAFNL 158
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
L G +LE+ +GSVR+ + +L A
Sbjct: 159 LWWWQFGGDLEQRLGSVRLIKLFVLSA 185
>gi|159900030|ref|YP_001546277.1| rhomboid family protein [Herpetosiphon aurantiacus DSM 785]
gi|159893069|gb|ABX06149.1| Rhomboid family protein [Herpetosiphon aurantiacus DSM 785]
Length = 286
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 71/156 (45%), Gaps = 28/156 (17%)
Query: 65 YRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALL 124
+R +T+ V HG ++H+ FNM AL LG +ER GS+R I ++ A
Sbjct: 83 WRLFTATVLHGGIVHIGFNMYALYALGPTVERFYGSLRFSVIYLIAGIGGAW-------- 134
Query: 125 VAHIPFYRLQNVMDECAIGFSGVIFSLI--VIETSLSGAQSRSVFGLFN-------IPAK 175
A F L +IG SG IF LI +I LS +RSV G F +
Sbjct: 135 -ASYSFGSLTG----PSIGASGAIFGLIGCLIGFFLS---ARSVLGDFARQNLRQMVGTA 186
Query: 176 WYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGF 211
LI+ + F ++ N + H+ G+L G A YG
Sbjct: 187 AINLIIGLSFSSVIDNYA---HIGGMLMGLAVGYGL 219
>gi|359490352|ref|XP_003634078.1| PREDICTED: inactive rhomboid protein 1 [Vitis vinifera]
Length = 324
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 93/237 (39%), Gaps = 67/237 (28%)
Query: 56 SAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNA 115
V+S+ Q +R T I H ++H+L NML+LV +G LE+ G VR+ I +L
Sbjct: 102 KKVVSKHQGWRLVTCIWLHAGIIHLLVNMLSLVLIGIRLEQQFGFVRIGVIYLL------ 155
Query: 116 ILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLF----- 170
GF G + S + I+ S+S S ++FGL
Sbjct: 156 --------------------------SGFGGSVLSSLFIQNSISVGASGALFGLLGAMLS 189
Query: 171 NIPAKWYP--------LILLVLFQVLMT-----NVSLLGHLCGILSGFAYTYGFFNLLMP 217
+ W L LLV+ V +T V+ H+ G ++GF + +LMP
Sbjct: 190 ELITNWSMYTNRAAALLTLLVIVAVNLTVGILPRVNNFAHIGGFVTGFFLGF----ILMP 245
Query: 218 GTSFYSAIESSSLLSTCIRQPKF------------ILCTGGNPSGYIPTYSGQNTSS 262
F IE +L + + K+ +L G G + Y G+N S
Sbjct: 246 RPQF-GWIEGRNLPADVRVKSKYKAYQYVCWLVSLVLLIAGFTVGLVMLYKGKNGSE 301
>gi|419959390|ref|ZP_14475444.1| intramembrane serine protease GlpG [Enterobacter cloacae subsp.
cloacae GS1]
gi|388605673|gb|EIM34889.1| intramembrane serine protease GlpG [Enterobacter cloacae subsp.
cloacae GS1]
Length = 276
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 49/87 (56%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
FT +++ C +++I + G S P +F V+R++T + H S++H+LFN+
Sbjct: 96 FTLLLMVACIIVFIIMSVVGDQSVMIALAWPYDPSLQFDVWRYFTHALMHFSVMHILFNL 155
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
L LG +E+ +GS ++ IT++ A
Sbjct: 156 LWWWYLGGAVEKRLGSGKLIVITLISA 182
>gi|444376944|ref|ZP_21176182.1| GlpG protein (membrane protein of glp regulon) [Enterovibrio sp.
AK16]
gi|443679069|gb|ELT85731.1| GlpG protein (membrane protein of glp regulon) [Enterovibrio sp.
AK16]
Length = 278
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Query: 25 FTSAVVIVCGTIYL-ICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFN 83
FT ++++VC +Y + L FG D F + F P+ ++Q++R ++ + H S H++FN
Sbjct: 99 FTLSIMVVCIVVYAGLTLGFGNDVFSLLHF-PATDDQQWQLWRLFSHALLHFSATHIVFN 157
Query: 84 MLALVPLGSELERIMGSVRMFYITILLA 111
+L LG ++E+ GS ++ + +L A
Sbjct: 158 LLWWWVLGGKIEKHSGSAKLMQLFLLTA 185
>gi|188535345|ref|YP_001909142.1| intramembrane serine protease GlpG [Erwinia tasmaniensis Et1/99]
gi|188030387|emb|CAO98280.1| Protein of glp regulon [Erwinia tasmaniensis Et1/99]
Length = 297
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
T +V+ C ++++ + G + + P +Q++R+++ + H SLLH+LFN+
Sbjct: 122 LTLSVIAACVLVFILMQVVGDQAVMSLLSWPDET-QHYQLWRWFSHALLHFSLLHILFNL 180
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
+ LG LE+ +GS ++F I ++ A
Sbjct: 181 MWFWYLGGALEKRLGSGKLFVIMLISA 207
>gi|365847085|ref|ZP_09387576.1| rhomboid protease GlpG [Yokenella regensburgei ATCC 43003]
gi|364572901|gb|EHM50430.1| rhomboid protease GlpG [Yokenella regensburgei ATCC 43003]
Length = 276
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 48/87 (55%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
FT + +C +++I + G + P +F+++R++T H SL+H+LFN+
Sbjct: 96 FTLLIAALCIVVFIIMNIVGDQPVMLLLAWPYDPSLKFELWRYFTHAFMHFSLMHILFNL 155
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
L LG +E+ +GS ++ IT++ A
Sbjct: 156 LWWWYLGGAVEKRLGSGKLIVITVISA 182
>gi|225455416|ref|XP_002279077.1| PREDICTED: inactive rhomboid protein 1 isoform 1 [Vitis vinifera]
gi|297741091|emb|CBI31822.3| unnamed protein product [Vitis vinifera]
Length = 325
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 93/237 (39%), Gaps = 67/237 (28%)
Query: 56 SAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNA 115
V+S+ Q +R T I H ++H+L NML+LV +G LE+ G VR+ I +L
Sbjct: 103 KKVVSKHQGWRLVTCIWLHAGIIHLLVNMLSLVLIGIRLEQQFGFVRIGVIYLL------ 156
Query: 116 ILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLF----- 170
GF G + S + I+ S+S S ++FGL
Sbjct: 157 --------------------------SGFGGSVLSSLFIQNSISVGASGALFGLLGAMLS 190
Query: 171 NIPAKWYP--------LILLVLFQVLMT-----NVSLLGHLCGILSGFAYTYGFFNLLMP 217
+ W L LLV+ V +T V+ H+ G ++GF + +LMP
Sbjct: 191 ELITNWSMYTNRAAALLTLLVIVAVNLTVGILPRVNNFAHIGGFVTGFFLGF----ILMP 246
Query: 218 GTSFYSAIESSSLLSTCIRQPKF------------ILCTGGNPSGYIPTYSGQNTSS 262
F IE +L + + K+ +L G G + Y G+N S
Sbjct: 247 RPQF-GWIEGRNLPADVRVKSKYKAYQYVCWLVSLVLLIAGFTVGLVMLYKGKNGSE 302
>gi|299538296|ref|ZP_07051581.1| hypothetical protein BFZC1_19855 [Lysinibacillus fusiformis ZC1]
gi|424736343|ref|ZP_18164803.1| hypothetical protein C518_0957 [Lysinibacillus fusiformis ZB2]
gi|298726498|gb|EFI67088.1| hypothetical protein BFZC1_19855 [Lysinibacillus fusiformis ZC1]
gi|422949946|gb|EKU44319.1| hypothetical protein C518_0957 [Lysinibacillus fusiformis ZB2]
Length = 207
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 17/142 (11%)
Query: 65 YRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALL 124
+R +++I H +HV FNM +L G ELE+I G R +ITI L + +
Sbjct: 58 WRVFSAIFLHAGFMHVFFNMFSLYLFGPELEKIAGKAR--FITIYLVSG----------I 105
Query: 125 VAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILL-V 183
V ++ Y + ++G SG IF + +L R++ L + P+I++ V
Sbjct: 106 VGNMATYIFYD-SSYASLGASGAIFGIFGAFGALVYYTRRTMPMLRKLIL---PIIVISV 161
Query: 184 LFQVLMTNVSLLGHLCGILSGF 205
+ L NV++ HL G+++GF
Sbjct: 162 IMTFLQPNVNVFAHLGGLVTGF 183
>gi|282853343|ref|ZP_06262680.1| peptidase, S54 (rhomboid) family protein [Propionibacterium acnes
J139]
gi|282582796|gb|EFB88176.1| peptidase, S54 (rhomboid) family protein [Propionibacterium acnes
J139]
Length = 302
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 83/185 (44%), Gaps = 14/185 (7%)
Query: 27 SAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISR----FQVYRFYTSIVFHG-SLLHVL 81
S V +V T+ IC L + + V++ + +RF TS+ H S+ H+
Sbjct: 85 SDVPVVTWTLIGICFLVWVGEWLSPQVGEAVVLAPRVGFTEPWRFVTSMFGHALSIFHIG 144
Query: 82 FNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECA 141
FNM AL LG LE +G R ++ L L+A A L NV D+
Sbjct: 145 FNMYALWALGRSLEPFLGRARFLAAYLMSGLGGGALFCLMA--TADGGRTILPNV-DDGV 201
Query: 142 IGFSGVIFS----LIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGH 197
+G SG IF L++++ L G +R ++ + I A I + +Q + L+G
Sbjct: 202 VGASGAIFGLFGVLLIVQRRL-GVSTRELWVVLAINAALLLFISGIAWQAHLGGF-LVGM 259
Query: 198 LCGIL 202
+CG++
Sbjct: 260 MCGVI 264
>gi|296814744|ref|XP_002847709.1| rhomboid protein 2 [Arthroderma otae CBS 113480]
gi|238840734|gb|EEQ30396.1| rhomboid protein 2 [Arthroderma otae CBS 113480]
Length = 268
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 94/223 (42%), Gaps = 16/223 (7%)
Query: 22 IPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVL 81
+P FT ++ +++ L +D +PS I +YR T + H +H
Sbjct: 23 LPLFTRLAILCIMVFWVLSLQTVWDVPRWGALVPSD-IGPAGMYRINTYPIVHAGFIHAF 81
Query: 82 FNMLALVPLGSELERIMGSVRMFYITI-LLATSNAILHLLIALLVAHIPFYRLQNVMDEC 140
N+L + PL E G++ + + L+T A +++L+A V +
Sbjct: 82 INVLGVTPLLERFEAEHGTLTSLAMFVGPLSTLPAGIYVLLAKFVLR---------TNTG 132
Query: 141 AIGFSGVIFSLIVIETSLSGAQSRS--VFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHL 198
+G S + L+ E ++ Q+ G + IP +PLIL + +L+ N + +GH
Sbjct: 133 VLGSSSWFYVLLSSE-AIKRFQTHPHISLGKYQIPTWTFPLILNAVASILLPNKAFIGHT 191
Query: 199 CGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFI 241
C I G+ G+ L P +E+ L+ R P ++
Sbjct: 192 CCIAVGYILGLGYLKFLFPPEKVLRWLETK--LNLLGRLPHYV 232
>gi|336122688|ref|YP_004564736.1| Integral membrane protein (Rhomboid family) [Vibrio anguillarum
775]
gi|335340411|gb|AEH31694.1| Integral membrane protein (Rhomboid family) [Vibrio anguillarum
775]
Length = 277
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 80/164 (48%), Gaps = 21/164 (12%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T V++VC I+ + + + P+ ++Q++R+++ + H S+LH++FN+L
Sbjct: 100 TLGVMMVCAIIFALQQFGLANQVFSALHFPALAGQQWQIWRWFSHALLHFSVLHIVFNLL 159
Query: 86 ALVPLGSELERIMGSVR---MFYITILLATS-------------NAILHLLIA---LLVA 126
LG ++E+ +GS + +F ++ LL+ + + +++ L+ +L
Sbjct: 160 WWWQLGGDVEKRLGSFKLGQLFLVSALLSGAAQYWVEGANFGGLSGVVYALVGYLWMLGW 219
Query: 127 HIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLF 170
P LQ M + IGF V L ++ ++ A S + GLF
Sbjct: 220 KAPHLGLQ--MPKPVIGFMLVWLVLGFVQPFMAIANSAHLAGLF 261
>gi|339478320|gb|ABE94774.1| Conserved hypothetical membrane spanning protein in rhomboid family
[Bifidobacterium breve UCC2003]
Length = 244
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 104/250 (41%), Gaps = 31/250 (12%)
Query: 17 QWWESIPFFTSAVVIVCGTIYLICLLFGYDS-------FYEICFLPSAVISRFQVYRFYT 69
QW P T A++ C ++L+ +L G+ S Y P+ +++ + + T
Sbjct: 10 QWEHGGPVMTWALIAACTAVWLVEVLLGFLSPTLQNWLIYRGMLAPATMLA--EPWAIVT 67
Query: 70 SIVFH--GSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAH 127
S+ H S+LH+LFNM+AL +G LER++G R + ++ A+ ++ A++
Sbjct: 68 SMFLHSPNSILHILFNMIALYSVGPVLERLIGHWRFLGLYMISGLGGALGMMVWAVVAPG 127
Query: 128 IPFYRLQNVMDECAIGFSGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVL 184
A G SG +F L +++ GA RS+ W + +
Sbjct: 128 ------GQGWQTAAYGASGALFGLFAALLVVYRRIGADIRSML-------IWMAVNFALP 174
Query: 185 FQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMP--GTSFYSAIESSSLLSTCIRQPKFIL 242
F V V+ H+ G + G T+ + P G S ++ T + +
Sbjct: 175 FVV--GGVAWQAHVGGFVVGGLLTWLLIGGIRPWRGKSLAWRMQVYGWSVTVLVIALIVA 232
Query: 243 CTGGNPSGYI 252
C NP G++
Sbjct: 233 CNFANPYGWM 242
>gi|421079889|ref|ZP_15540825.1| Rhomboid protease glpG-like protein [Pectobacterium wasabiae CFBP
3304]
gi|401705376|gb|EJS95563.1| Rhomboid protease glpG-like protein [Pectobacterium wasabiae CFBP
3304]
Length = 277
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
T +V++V ++++ + GY+S P A + Q++R+++ + H SLLH+LFN+
Sbjct: 98 LTLSVMVVTIAVFILMQISGYESVMVWLAFP-AEGQQAQLWRWFSHALLHFSLLHILFNL 156
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
+ LG +E+++G+ ++ IT++ A
Sbjct: 157 MWWWYLGGPVEKVLGTGKLLVITLVSA 183
>gi|377578368|ref|ZP_09807346.1| rhomboid protease glpG [Escherichia hermannii NBRC 105704]
gi|377540298|dbj|GAB52511.1| rhomboid protease glpG [Escherichia hermannii NBRC 105704]
Length = 276
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 84/194 (43%), Gaps = 32/194 (16%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
FT + VC +Y++ L G + P F+ +R++T + H S++H+ FN+
Sbjct: 96 FTIGLAAVCIAVYILMLTLGDQAVMIWLAWPYDPSLDFEFWRYFTHALLHFSVMHITFNL 155
Query: 85 LALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGF 144
L LG +E+ +GS ++ +T + A L++ V H G
Sbjct: 156 LWWWYLGGPVEKRLGSGKLIVLTAIAA--------LLSGFVQH-------KFSGAWFGGL 200
Query: 145 SGVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLL 195
SGV+++L+ E+ + + VF L + A W+ LF + + N +
Sbjct: 201 SGVVYALMGYVWLRGERDPESGIVMPRGLMVFALLWLVAGWFD-----LFGMSIANAA-- 253
Query: 196 GHLCGILSGFAYTY 209
H+ G+L G A +
Sbjct: 254 -HVTGLLVGLAMAF 266
>gi|308188432|ref|YP_003932563.1| protein glpG [Pantoea vagans C9-1]
gi|308058942|gb|ADO11114.1| Protein glpG [Pantoea vagans C9-1]
Length = 273
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
T +++++C ++++ + G + P A QV+R+++ + H SLLH+LFN+
Sbjct: 95 LTMSLMVLCIAVFILMQVMGDQTVMAWLSWPDA-DQHLQVWRWFSHALLHFSLLHILFNL 153
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
+ LG +E+ +GS ++F I ++ A
Sbjct: 154 MWWWYLGGAVEKRLGSGKLFVIMLISA 180
>gi|453065781|gb|EMF06740.1| intramembrane serine protease GlpG [Serratia marcescens VGH107]
Length = 278
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 47/87 (54%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
T V+++C +Y++ G D+ P Q++R+ + H SLLH+LFN+
Sbjct: 97 LTLGVMVLCIAVYILMQALGDDTVMYWLSWPQDSSQYTQLWRWVSHAFLHFSLLHILFNL 156
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
+ LG ++E+ +G+ ++F + ++ A
Sbjct: 157 MWWWYLGGQMEKRLGAGKLFVLAVVSA 183
>gi|88195357|ref|YP_500161.1| rhomboid family protein, partial [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|87202915|gb|ABD30725.1| rhomboid family protein [Staphylococcus aureus subsp. aureus NCTC
8325]
Length = 336
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 27/187 (14%)
Query: 30 VIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSLLHVLFNM 84
+I + +C++ ++F ++ L + F V YR TS+ H S H+L NM
Sbjct: 163 IIFVNVLIWLCMILYLNNFSDVKLLDVGGLVHFNVVHGEWYRIVTSMFLHFSFEHILMNM 222
Query: 85 LALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGF 144
L+L G +E I+GS RM + IA L + F L ++G
Sbjct: 223 LSLFIFGKIVEAIIGSWRMLTV------------YFIAGLFGN--FVSLSFNTTTISVGA 268
Query: 145 SGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGI 201
SG IF L I +S ++ + G I L++LV + M+N++++ H+ G
Sbjct: 269 SGAIFGLIGSIFAMMYVSKTFNKKMLGQLLI-----ALVILVGVSLFMSNINIVAHIGGF 323
Query: 202 LSGFAYT 208
+ G T
Sbjct: 324 IGGLLIT 330
>gi|423110735|ref|ZP_17098430.1| rhomboid protease glpG [Klebsiella oxytoca 10-5243]
gi|376378799|gb|EHS91557.1| rhomboid protease glpG [Klebsiella oxytoca 10-5243]
Length = 274
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 49/86 (56%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T +V+ C ++++ + G + P +F+V+R+++ + H SL+H+LFN+L
Sbjct: 95 TWSVLFACIAVFVLQSVIGDQPVMMLLAWPYDPSLKFEVWRYFSHALMHFSLMHILFNLL 154
Query: 86 ALVPLGSELERIMGSVRMFYITILLA 111
LG +E+ +GS ++ IT++ A
Sbjct: 155 WWWYLGGAVEKRIGSGKLVVITVIAA 180
>gi|398348147|ref|ZP_10532850.1| hypothetical protein Lbro5_13164 [Leptospira broomii str. 5399]
Length = 279
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 73/164 (44%), Gaps = 16/164 (9%)
Query: 54 LPSAVISRFQVYRFYTSIVFH--GSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLA 111
+P V+ +F V++ T H S+ H+LFNML+L GS LE GS ++
Sbjct: 51 VPDFVLHKFFVWQVLTYAFLHDPNSIFHILFNMLSLWMFGSTLEAYWGSKNFLKFYLVSC 110
Query: 112 TSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFN 171
IL L LL +G SG ++ L++ + + F +F
Sbjct: 111 IGGGILPLFAHLL----------GFPQGTIVGASGGLYGLLIAFALIWPNRELYYFAIFP 160
Query: 172 IPAKWYPLILLVL--FQVLMTNVSLLGHLCGILSGFAYTYGFFN 213
I AK++ LILL+L F + V++ H G L F Y F+N
Sbjct: 161 IKAKYFVLILLLLIGFTSSSSGVAVTAHAGGAL--FGALYFFYN 202
>gi|414174489|ref|ZP_11428893.1| hypothetical protein HMPREF9695_02539 [Afipia broomeae ATCC 49717]
gi|410888318|gb|EKS36121.1| hypothetical protein HMPREF9695_02539 [Afipia broomeae ATCC 49717]
Length = 279
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 15/115 (13%)
Query: 21 SIPFFTSAVVIVCGTIY----LICLLFGYDSFYEICFLP-----SAVISRF------QVY 65
+IPF +A++++ I+ L+ L + + F+P S + +F +++
Sbjct: 36 TIPFGMTAILVIMAAIHGVRALLPLATDQEVIWTFGFVPARYDASVLAGQFPGGVGAEIW 95
Query: 66 RFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLL 120
F T H + H+ FNML ++P GS + R G+VR F + A + A HL+
Sbjct: 96 TFLTYAFLHADITHIAFNMLWMLPFGSAVARRFGTVRFFAFFAVTAIAGAFAHLV 150
>gi|254229776|ref|ZP_04923183.1| peptidase, S54 (rhomboid) family, putative [Vibrio sp. Ex25]
gi|262392917|ref|YP_003284771.1| protein GlpG [Vibrio sp. Ex25]
gi|151937675|gb|EDN56526.1| peptidase, S54 (rhomboid) family, putative [Vibrio sp. Ex25]
gi|262336511|gb|ACY50306.1| protein GlpG [Vibrio sp. Ex25]
Length = 280
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 53/88 (60%), Gaps = 2/88 (2%)
Query: 26 TSAVVIVCGTIYLICLLFGY-DSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
T ++ VC IYL+ + FG+ + +++ P+ ++QV+R+ + + H S+ H++FN+
Sbjct: 100 TLLIMTVCTIIYLLQM-FGFGNGVFKLLHFPAFEGQQWQVWRWLSHALLHFSVTHIVFNL 158
Query: 85 LALVPLGSELERIMGSVRMFYITILLAT 112
L LG ++ER +GS ++ + ++ A
Sbjct: 159 LWWWQLGGDIERRLGSGKLLQLFVVSAA 186
>gi|375257746|ref|YP_005016916.1| intramembrane serine protease GlpG [Klebsiella oxytoca KCTC 1686]
gi|397660363|ref|YP_006501065.1| glpG protein (membrane protein of glp regulon) [Klebsiella oxytoca
E718]
gi|365907224|gb|AEX02677.1| intramembrane serine protease GlpG [Klebsiella oxytoca KCTC 1686]
gi|394348401|gb|AFN34522.1| GlpG protein (membrane protein of glp regulon) [Klebsiella oxytoca
E718]
Length = 276
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 48/86 (55%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T V+ C ++++ + G + P +F+V+R+++ + H SL+H+LFN+L
Sbjct: 97 TWGVLFACIAVFVLQTVIGDQPVMLLLAWPYDPSLKFEVWRYFSHALMHFSLMHILFNLL 156
Query: 86 ALVPLGSELERIMGSVRMFYITILLA 111
LG +E+ +GS ++ IT++ A
Sbjct: 157 WWWYLGGAVEKRIGSGKLVVITVIAA 182
>gi|448244344|ref|YP_007408397.1| rhomboid intramembrane serine protease [Serratia marcescens WW4]
gi|445214708|gb|AGE20378.1| rhomboid intramembrane serine protease [Serratia marcescens WW4]
Length = 278
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 47/87 (54%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
T V+++C +Y++ G D+ P Q++R+ + H SLLH+LFN+
Sbjct: 97 LTLGVMVLCIAVYILMQALGDDTVMYWLSWPQDSSQYTQLWRWVSHAFLHFSLLHILFNL 156
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
+ LG ++E+ +G+ ++F + ++ A
Sbjct: 157 MWWWYLGGQMEKRLGAGKLFVLAVVSA 183
>gi|451972030|ref|ZP_21925243.1| peptidase, S54 (rhomboid) family, putative [Vibrio alginolyticus
E0666]
gi|451932044|gb|EMD79725.1| peptidase, S54 (rhomboid) family, putative [Vibrio alginolyticus
E0666]
Length = 280
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 53/88 (60%), Gaps = 2/88 (2%)
Query: 26 TSAVVIVCGTIYLICLLFGY-DSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
T ++ VC IYL+ + FG+ + +++ P+ ++QV+R+ + + H S+ H++FN+
Sbjct: 100 TLLIMTVCTIIYLLQM-FGFGNGVFKLLHFPAFEGQQWQVWRWLSHALLHFSVTHIVFNL 158
Query: 85 LALVPLGSELERIMGSVRMFYITILLAT 112
L LG ++ER +GS ++ + ++ A
Sbjct: 159 LWWWQLGGDIERRLGSGKLLQLFVVSAA 186
>gi|145553339|ref|XP_001462344.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124430183|emb|CAK94971.1| unnamed protein product [Paramecium tetraurelia]
Length = 270
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 104/240 (43%), Gaps = 14/240 (5%)
Query: 14 RANQWWESIPFFTSAVV---IVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTS 70
+ N W+SI F T V+ I+C + ++ +D F ++ P+ ++F+++R
Sbjct: 6 KINALWQSITFGTKFVLLSSILCCILDVLTNDILFDLFVDV---PNKTFNQFELWRLLIP 62
Query: 71 IVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPF 130
FHG++ +++ ++L + E+E+ G++ F+ I +N I+ + LL +
Sbjct: 63 QFFHGNVYNLIISLLGFLLCAIEVEKSYGTIP-FFCDIFF--TNLIIQAIYVLLCFSLQK 119
Query: 131 YRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGL--FNIPAKWYPLILLVLFQVL 188
++ MD + GF + F + ++ L+ F F IP+K+YP ++ ++
Sbjct: 120 LSIE-AMDSQSFGFWNITF-IYMLNKGLTDQDDYQKFLCFPFYIPSKYYPAAFFLIMNLI 177
Query: 189 -MTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFILCTGGN 247
+ L+ + GF L F + IE S + FI C N
Sbjct: 178 EFPRLDLIAATLFAFIEYQLFDGFMMKLSKNKGFVTGIEHSFPFKYIQSRQDFITCDQVN 237
>gi|395203124|ref|ZP_10394358.1| membrane spanning protein [Propionibacterium humerusii P08]
gi|422441685|ref|ZP_16518494.1| peptidase, S54 family protein [Propionibacterium acnes HL037PA3]
gi|422473010|ref|ZP_16549491.1| peptidase, S54 family protein [Propionibacterium acnes HL037PA2]
gi|422573292|ref|ZP_16648854.1| peptidase, S54 family protein [Propionibacterium acnes HL044PA1]
gi|313835668|gb|EFS73382.1| peptidase, S54 family protein [Propionibacterium acnes HL037PA2]
gi|314928339|gb|EFS92170.1| peptidase, S54 family protein [Propionibacterium acnes HL044PA1]
gi|314970269|gb|EFT14367.1| peptidase, S54 family protein [Propionibacterium acnes HL037PA3]
gi|328908078|gb|EGG27837.1| membrane spanning protein [Propionibacterium humerusii P08]
Length = 302
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 86/187 (45%), Gaps = 13/187 (6%)
Query: 21 SIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHG-SLLH 79
+P T ++ C +++ LL S + P A + + +RF TS+ H ++ H
Sbjct: 86 DVPVVTWTLIGTCFLVWVGELLSPQVS-QAVVLAPRAGFT--EPWRFVTSMFGHALNIFH 142
Query: 80 VLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDE 139
+ FNM AL LG LE +G R ++ L L+A + L NV D+
Sbjct: 143 IGFNMYALWALGRSLEPFLGRARFLAAYLMSGLGGGALFCLMATTNGNGTI--LPNV-DD 199
Query: 140 CAIGFSGVIFS----LIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLL 195
+G SG IF L++++ L GA +R ++ + I A I + +Q + L+
Sbjct: 200 GVVGASGAIFGLFGVLLIVQRRL-GASTRDLWVVLAINAALLFFISGIAWQAHLGGF-LV 257
Query: 196 GHLCGIL 202
G +CGI+
Sbjct: 258 GMVCGII 264
>gi|402845467|ref|ZP_10893805.1| rhomboid family protease GlpG [Klebsiella sp. OBRC7]
gi|423105237|ref|ZP_17092939.1| rhomboid protease glpG [Klebsiella oxytoca 10-5242]
gi|376382003|gb|EHS94739.1| rhomboid protease glpG [Klebsiella oxytoca 10-5242]
gi|402271164|gb|EJU20415.1| rhomboid family protease GlpG [Klebsiella sp. OBRC7]
Length = 276
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 48/86 (55%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T V+ C ++++ + G + P +F+V+R+++ + H SL+H+LFN+L
Sbjct: 97 TWGVLFACIAVFVLQTVIGDQPVMLLLAWPYDPSLKFEVWRYFSHALMHFSLMHILFNLL 156
Query: 86 ALVPLGSELERIMGSVRMFYITILLA 111
LG +E+ +GS ++ IT++ A
Sbjct: 157 WWWYLGGAVEKRIGSGKLVVITVIAA 182
>gi|167376871|ref|XP_001734188.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165904449|gb|EDR29670.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 266
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 67/143 (46%), Gaps = 17/143 (11%)
Query: 74 HGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRL 133
H +LH+ N ++L G+ +E+ +G+ R+ + IL IL I + L
Sbjct: 71 HEGILHLFGNSISLFVFGALVEKQIGTTRIIILFILSIILQPILM---------ISLFSL 121
Query: 134 QNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFG-LFNIPAKWYPLILLVLFQVLMTNV 192
+ +G SG IF+LI+I G ++ + NI + + L+LL V
Sbjct: 122 KLASGNSVVGMSGYIFTLIIIFYYQPGKYMDVIYCCILNIISYIFCLLLL-------AQV 174
Query: 193 SLLGHLCGILSGFAYTYGFFNLL 215
SL GH CGI+ G YT GF + L
Sbjct: 175 SLSGHFCGIIIGVLYTRGFLDWL 197
>gi|291438500|ref|ZP_06577890.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
gi|291341395|gb|EFE68351.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
Length = 296
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 71/166 (42%), Gaps = 28/166 (16%)
Query: 53 FLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLAT 112
FLP+ ++ + YR +TS+ H ++ H+ FNML L LG LE+ +G R + ++
Sbjct: 121 FLPTEGVADGEWYRLFTSMFTHEAIWHIAFNMLGLWWLGGPLEQALGRARYLALYLISGL 180
Query: 113 SNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNI 172
+ + L L+A +G SG IF L L + +
Sbjct: 181 AGSALTYLLA-------------SGTTATLGASGAIFGLFGAMAVL----------MRRL 217
Query: 173 PAKWYPLILLVLFQVLMT-----NVSLLGHLCGILSGFAYTYGFFN 213
P+I L++ ++ T N++ H+ G+++G Y +
Sbjct: 218 DYDMRPIIALLVINLIFTFSPGFNIAWQAHIGGLVAGVVIGYAMVH 263
>gi|238765189|ref|ZP_04626120.1| Rhomboid protease glpG [Yersinia kristensenii ATCC 33638]
gi|238696572|gb|EEP89358.1| Rhomboid protease glpG [Yersinia kristensenii ATCC 33638]
Length = 278
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 48/87 (55%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
T +++++C IY++ + G + P Q++R+ + + H SLLH+LFN+
Sbjct: 97 LTLSIMVLCIAIYILMQIVGDATVMSWLAWPRDESQYLQIWRWVSHALLHFSLLHILFNL 156
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
+ L ++E+ +GS ++ +TI+ A
Sbjct: 157 MWWWYLAGQMEKRLGSGKLLVLTIVSA 183
>gi|403046456|ref|ZP_10901925.1| hypothetical protein SOJ_15340 [Staphylococcus sp. OJ82]
gi|402763152|gb|EJX17245.1| hypothetical protein SOJ_15340 [Staphylococcus sp. OJ82]
Length = 485
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 84/191 (43%), Gaps = 28/191 (14%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSLLHV 80
T ++ V I+L +LF + F ++ L + F V YR +SI H H+
Sbjct: 159 TYTLIAVNIIIWLAMVLF-LNRFSDLKMLDVGGLVHFNVVHGEWYRLISSIFLHYDFEHI 217
Query: 81 LFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDEC 140
L NML+L G +E I+G RM I I +A L + F L +D
Sbjct: 218 LMNMLSLFIFGKIVESIVGHWRMIVIYI------------VAGLFGN--FASLSFNIDTV 263
Query: 141 AIGFSGVIFSLI--VIETSLSGAQ-SRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGH 197
+ G SG IF LI + G Q +R + G I L++++ + M N++++ H
Sbjct: 264 SAGASGAIFGLIGAIFGFMYVGKQFNRKLIGQLLI-----VLVIMIGLSLFMQNINIVAH 318
Query: 198 LCGILSGFAYT 208
+ G + G T
Sbjct: 319 IGGFVGGLLIT 329
>gi|238754087|ref|ZP_04615445.1| Rhomboid protease glpG [Yersinia ruckeri ATCC 29473]
gi|238707583|gb|EEP99942.1| Rhomboid protease glpG [Yersinia ruckeri ATCC 29473]
Length = 278
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 50/88 (56%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
T ++++VC +Y++ + G ++ P F+ +R+ + + H SL+H+LFN+
Sbjct: 97 LTLSMMVVCIAVYILMQIVGDNTVMSWLAWPRNSSQYFEFWRWVSHGLLHFSLMHILFNL 156
Query: 85 LALVPLGSELERIMGSVRMFYITILLAT 112
+ LG ++E+ +G+ ++ +TI+ A
Sbjct: 157 MWWWYLGGQMEKRLGTGKLVVLTIVSAV 184
>gi|193214499|ref|YP_001995698.1| rhomboid family protein [Chloroherpeton thalassium ATCC 35110]
gi|193087976|gb|ACF13251.1| Rhomboid family protein [Chloroherpeton thalassium ATCC 35110]
Length = 264
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 16/152 (10%)
Query: 60 SRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHL 119
F+V++ T + HG H+LFNM AL G+E+E G+ R F + A L
Sbjct: 55 GNFEVWQPLTYMFLHGGFTHILFNMFALWIFGAEIENYWGT-RHFTTYYFVCGVGAALIN 113
Query: 120 LIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWY-- 177
LIA + A P +G SG +F +++ + + ++ LF I AK++
Sbjct: 114 LIASIGAGGP-----------TVGASGAVFGVLLAFGMMFPNRYIFLYFLFPIKAKYFVA 162
Query: 178 PLILLVLFQVLMTN--VSLLGHLCGILSGFAY 207
++ F N V+ HL G+L G+ Y
Sbjct: 163 GYAIIEFFSTFNINSPVAHFAHLGGMLVGYVY 194
>gi|260951065|ref|XP_002619829.1| hypothetical protein CLUG_00988 [Clavispora lusitaniae ATCC 42720]
gi|238847401|gb|EEQ36865.1| hypothetical protein CLUG_00988 [Clavispora lusitaniae ATCC 42720]
Length = 269
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 65/160 (40%), Gaps = 16/160 (10%)
Query: 74 HGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRL 133
H ++ H L N++ L PL S ER G+V LLA A+ + ++ L +
Sbjct: 63 HVNIFHWLINIVTLFPLLSRYERFHGTVYTGVTLNLLAVVTALQYCVVGLFLYP------ 116
Query: 134 QNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGL------FNIPAKWYPLILLVLFQV 187
+ G SG+ FS + + L +P ++P L L +
Sbjct: 117 ----SDAVAGLSGICFSFLTYFCYKEHEMKPVIMSLNFAGHELQVPTIYFPFFNLFLIAL 172
Query: 188 LMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIES 227
++ + S GHL GI +G+ G ++L P AIE
Sbjct: 173 IIPSTSFFGHLAGIGAGYLLAMGKLSVLYPPAKIILAIEK 212
>gi|21222264|ref|NP_628043.1| hypothetical protein SCO3855 [Streptomyces coelicolor A3(2)]
gi|289770532|ref|ZP_06529910.1| conserved hypothetical protein [Streptomyces lividans TK24]
gi|5102807|emb|CAB45222.1| putative membrane protein [Streptomyces coelicolor A3(2)]
gi|289700731|gb|EFD68160.1| conserved hypothetical protein [Streptomyces lividans TK24]
Length = 297
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 73/165 (44%), Gaps = 27/165 (16%)
Query: 53 FLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLAT 112
F+P+ ++ + YR T++ H + H+ FNM++L LG LE +G R + ++
Sbjct: 123 FVPTEGVAEGEWYRLVTTMFTHEEIWHIGFNMISLWFLGGPLEAALGRARYLALYLVSGL 182
Query: 113 SNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNI 172
+ ++L L+A +G SG IF L +L + +
Sbjct: 183 AGSVLAYLLA-------------SPTTATLGASGAIFGLFGATAAL----------VRRL 219
Query: 173 PAKWYPLILLVLFQVLMT----NVSLLGHLCGILSGFAYTYGFFN 213
A P+++L++ ++ T N+S H+ G+++G Y +
Sbjct: 220 NADMRPVVILLVISLIFTFTRGNISWQAHVGGLVAGAVIGYAMLH 264
>gi|260767582|ref|ZP_05876518.1| protein GlpG [Vibrio furnissii CIP 102972]
gi|260617482|gb|EEX42665.1| protein GlpG [Vibrio furnissii CIP 102972]
Length = 281
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 50/88 (56%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
T V+ VC I+++ + + + P+ ++Q++R++T + H S++H++FN+
Sbjct: 99 LTLLVMAVCAVIFVLAYVGLGNQIFGALHFPAHAGQQWQLWRWFTHALLHFSVIHIVFNL 158
Query: 85 LALVPLGSELERIMGSVRMFYITILLAT 112
L LG ++E+ +GS ++ + ++ A
Sbjct: 159 LWWWQLGGDIEKRLGSGKLLQVFLISAA 186
>gi|258623127|ref|ZP_05718139.1| glpG protein [Vibrio mimicus VM573]
gi|424810738|ref|ZP_18236079.1| glpG protein [Vibrio mimicus SX-4]
gi|258584610|gb|EEW09347.1| glpG protein [Vibrio mimicus VM573]
gi|342322110|gb|EGU17904.1| glpG protein [Vibrio mimicus SX-4]
Length = 278
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 48/87 (55%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
FT ++ +C I+ + D+ + P+ ++Q++R+ + + H S++H+ FN+
Sbjct: 99 FTLFIMALCIAIFALQTFGAGDAIFNALHFPAQASQQWQIWRWVSHALLHFSVMHIAFNL 158
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
L G +LE+ +GS+++ + I+ A
Sbjct: 159 LWWWQFGGDLEQRLGSLKLIKLFIISA 185
>gi|183235522|ref|XP_649571.2| peptidase S54 (rhomboid) family protein [Entamoeba histolytica
HM-1:IMSS]
gi|169800503|gb|EAL44183.2| peptidase S54 (rhomboid) family protein [Entamoeba histolytica
HM-1:IMSS]
gi|449710571|gb|EMD49623.1| peptidase S54 (rhomboid) family protein [Entamoeba histolytica
KU27]
Length = 266
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 69/143 (48%), Gaps = 17/143 (11%)
Query: 74 HGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRL 133
H + H+ N ++L+ G+ +E+ +G+ ++ ILL + +L ++ I + L
Sbjct: 71 HEGIFHLFGNSISLLVFGASVEKKIGTTQV----ILLFIVSIVLQPILM-----ISLFSL 121
Query: 134 QNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFG-LFNIPAKWYPLILLVLFQVLMTNV 192
+ +G SG IF+LI+I G V+ + NI + L+LL V
Sbjct: 122 KLASGNSVVGISGYIFTLIIIFYYQPGKYMDIVYCCVLNIITYIFSLLLL-------AQV 174
Query: 193 SLLGHLCGILSGFAYTYGFFNLL 215
SL GH CGI+ G YT GF + L
Sbjct: 175 SLSGHFCGIIIGVLYTRGFLDWL 197
>gi|384196250|ref|YP_005581994.1| peptidase, S54 family [Bifidobacterium breve ACS-071-V-Sch8b]
gi|333110956|gb|AEF27972.1| peptidase, S54 family [Bifidobacterium breve ACS-071-V-Sch8b]
Length = 246
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 75/163 (46%), Gaps = 20/163 (12%)
Query: 17 QWWESIPFFTSAVVIVCGTIYLICLLFGYDS-------FYEICFLPSAVISRFQVYRFYT 69
QW P T A++ C ++L+ +L G+ S Y P+ +++ + + T
Sbjct: 12 QWEHGGPVMTWALIAACTAVWLVEVLLGFLSPTLQNWLIYRGMLAPATMLA--EPWAIVT 69
Query: 70 SIVFHG--SLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAH 127
S+ H S+LH+LFNM+AL +G LER++G R + ++ A+ ++ A++
Sbjct: 70 SMFLHAPNSILHILFNMIALYSVGPVLERLIGHWRFLGLYMISGLGGALGMMVWAVVAPG 129
Query: 128 IPFYRLQNVMDECAIGFSGVIFSL---IVIETSLSGAQSRSVF 167
A G SG +F L +++ GA RS+
Sbjct: 130 ------GQGWQTAAYGASGALFGLFAALLVVYRRIGADIRSML 166
>gi|410620604|ref|ZP_11331469.1| GlpG protein [Glaciecola polaris LMG 21857]
gi|410159867|dbj|GAC35607.1| GlpG protein [Glaciecola polaris LMG 21857]
Length = 288
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 89/189 (47%), Gaps = 23/189 (12%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSA-VISRFQVYRFYTSIVFHGSLLHVLFNM 84
T++V++ C IYL+ ++ + + + P A ++ Q +R + H S LH++FN+
Sbjct: 103 TTSVLVTCLVIYLLAMVGVFWPYKILVIEPIAELMQNHQWWRLIGPALIHFSALHIVFNL 162
Query: 85 LALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGF 144
L LG +LER +G + + + +L A + + L+++ E G
Sbjct: 163 LWWWTLGGQLERRLGKMTLITLFLLSALLSNVGQLMVS---------------GEHFGGL 207
Query: 145 SGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLF----QVLMTNVSLLGHLCG 200
SGV+++L+ L R +GL IP +L+ L +L +++ H G
Sbjct: 208 SGVVYALVGCVWWL--GWLRPAWGLM-IPKPMVGFLLVWLVVGYADILWVSMANTAHTVG 264
Query: 201 ILSGFAYTY 209
++SG A+ +
Sbjct: 265 LVSGCAFAF 273
>gi|304397835|ref|ZP_07379711.1| Rhomboid protease [Pantoea sp. aB]
gi|440759768|ref|ZP_20938895.1| GlpG protein [Pantoea agglomerans 299R]
gi|304354546|gb|EFM18917.1| Rhomboid protease [Pantoea sp. aB]
gi|436426513|gb|ELP24223.1| GlpG protein [Pantoea agglomerans 299R]
Length = 274
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
T ++++C ++++ + G + P A QV+R+++ + H SLLH+LFN+
Sbjct: 96 LTMTLMVLCIAVFILMQVMGDQAVMAWLSWPDA-DQHLQVWRWFSHALLHFSLLHILFNL 154
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
+ LG +E+ +GS ++F I ++ A
Sbjct: 155 MWWWYLGGAVEKRLGSGKLFVIMLISA 181
>gi|157372871|ref|YP_001480860.1| intramembrane serine protease GlpG [Serratia proteamaculans 568]
gi|172047790|sp|A8GKU2.1|GLPG_SERP5 RecName: Full=Rhomboid protease GlpG; AltName: Full=Intramembrane
serine protease
gi|157324635|gb|ABV43732.1| Rhomboid family protein [Serratia proteamaculans 568]
Length = 278
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 45/87 (51%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
T V+ +C +Y++ + G D+ P Q++R+ + H SLLH+ FN+
Sbjct: 97 LTLGVMALCIVVYILMQILGDDTLMYWLSWPQDSSQYLQLWRWVSHAFLHFSLLHITFNL 156
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
L LG LE+ +GS ++F + ++ A
Sbjct: 157 LWWWYLGGPLEKRLGSGKLFVLAVVSA 183
>gi|375129605|ref|YP_004991702.1| peptidase, S54 (rhomboid) family [Vibrio furnissii NCTC 11218]
gi|315178776|gb|ADT85690.1| peptidase, S54 (rhomboid) family, hypothetical [Vibrio furnissii
NCTC 11218]
Length = 281
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 50/88 (56%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
T V+ VC I+++ + + + P+ ++Q++R++T + H S++H++FN+
Sbjct: 99 LTLLVMAVCAVIFVLAYVGLGNQIFGALHFPAHAGQQWQLWRWFTHALLHFSVIHIVFNL 158
Query: 85 LALVPLGSELERIMGSVRMFYITILLAT 112
L LG ++E+ +GS ++ + ++ A
Sbjct: 159 LWWWQLGGDIEKRLGSGKLLQVFLISAA 186
>gi|325106149|ref|YP_004275803.1| rhomboid family protein [Pedobacter saltans DSM 12145]
gi|324974997|gb|ADY53981.1| Rhomboid family protein [Pedobacter saltans DSM 12145]
Length = 292
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 89/190 (46%), Gaps = 17/190 (8%)
Query: 29 VVIVCGTIYLICLLF----GYDSF-YEICFLPSAVISRFQVYRFYTSIVF---HGSLLHV 80
V ++ I L+ LLF G D F YE +P+ + S +YRF+T + H + H+
Sbjct: 28 VFLMLSIISLVSLLFFKQGGIDLFTYEYLGVPANLHSL--LYRFWTPFTYMFVHEGIWHI 85
Query: 81 LFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDEC 140
LFNML L +G E ++ ++ IL S A +++ L IP ++ +
Sbjct: 86 LFNMLWLFWMGKIFEGFQNPKKLTFLYILGGISGAAFYIICYNL---IPAFK-DSAPTSI 141
Query: 141 AIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLC- 199
A+G S + ++++ +L S + ++ KW L+ +++ + + + GHL
Sbjct: 142 AVGSSAAVSAIVIATATLLPNYSIQLLLFGSVKLKWLALVFIIIDVISLAGSNAGGHLSH 201
Query: 200 --GILSGFAY 207
G L GF Y
Sbjct: 202 LGGALFGFFY 211
>gi|392972219|ref|ZP_10337611.1| rhomboid family protein [Staphylococcus equorum subsp. equorum Mu2]
gi|392509932|emb|CCI60913.1| rhomboid family protein [Staphylococcus equorum subsp. equorum Mu2]
Length = 391
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 84/191 (43%), Gaps = 28/191 (14%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSLLHV 80
T ++ V I+L +LF + F ++ L + F V YR +SI H H+
Sbjct: 65 TYTLIAVNIIIWLAMVLF-LNRFSDLKMLDVGGLVHFNVVHGEWYRLISSIFLHYDFEHI 123
Query: 81 LFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDEC 140
L NML+L G +E I+G RM I I +A L + F L +D
Sbjct: 124 LMNMLSLFIFGKIVESIVGHWRMIVIYI------------VAGLFGN--FASLSFNIDTV 169
Query: 141 AIGFSGVIFSLI--VIETSLSGAQ-SRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGH 197
+ G SG IF LI + G Q +R + G I L++++ + M N++++ H
Sbjct: 170 SAGASGAIFGLIGAIFGFMYVGKQFNRKLIGQLLI-----VLVIMIGLSLFMQNINIVAH 224
Query: 198 LCGILSGFAYT 208
+ G + G T
Sbjct: 225 IGGFVGGLLIT 235
>gi|54307378|ref|YP_128398.1| hypothetical protein PBPRA0157 [Photobacterium profundum SS9]
gi|46911798|emb|CAG18596.1| hypothetical GlpG protein [Photobacterium profundum SS9]
Length = 280
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 49/87 (56%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
F+ +V++V IY++ +++ P ++QV+RF++ + H S LH++FN
Sbjct: 99 FSLSVMVVVIAIYVLWFFGLQQPIFDLFHYPFMDGDQWQVWRFFSHALIHFSALHIIFNC 158
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
L LG +LER GSV++ + ++ A
Sbjct: 159 LWWWILGGQLERHSGSVKLVQVFLISA 185
>gi|220910797|ref|YP_002486106.1| rhomboid family protein [Arthrobacter chlorophenolicus A6]
gi|219857675|gb|ACL38017.1| Rhomboid family protein [Arthrobacter chlorophenolicus A6]
Length = 292
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 82/191 (42%), Gaps = 25/191 (13%)
Query: 23 PFFTSAVVIVCGTIYLICLLFGYDSFYE----ICFLPSAVISRFQVYRFYTSIVFH--GS 76
P T ++ C +Y++ + D+ Y+ +F+ +R T+ H G
Sbjct: 77 PMVTFGIIAACAVLYVLQWIIPNDAVYQSLGFANIYAEPRYGQFEPWRMLTAAFLHSQGF 136
Query: 77 LLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNV 136
+LH+ NM L G LE ++G VR + +L A ++ +LL+ L ++P L V
Sbjct: 137 ILHIALNMYMLWIFGQALEPLLGRVRFLAVYLLSALGGSVGYLLLTPL--YVPGQPLYGV 194
Query: 137 MDECAIGFSGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVS 193
+G SG IF L +++ G +R ++ L I L+ ++
Sbjct: 195 -----VGASGAIFGLFGAMLLVQRQRGGDTRQLWILIAINGA---------IGFLVPQIA 240
Query: 194 LLGHLCGILSG 204
HL G+++G
Sbjct: 241 WQAHLGGLVTG 251
>gi|440717205|ref|ZP_20897696.1| glpG protein [Rhodopirellula baltica SWK14]
gi|436437672|gb|ELP31290.1| glpG protein [Rhodopirellula baltica SWK14]
Length = 329
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 55/93 (59%), Gaps = 11/93 (11%)
Query: 59 ISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILH 118
I + +++R T HGS +H++FNM+AL LGS +ER+ GS F ++LL + H
Sbjct: 184 IKKGEIWRLVTPAFLHGSTMHLVFNMMALFTLGSVVERLHGS--WFLASLLLVS-----H 236
Query: 119 LLIALLVAHIPFYRLQNVMDECAIGFSGVIFSL 151
++ ++ +P + L++ M A+G SG +F +
Sbjct: 237 IIGMIVQVVLPDW-LESPM---AVGASGAVFGV 265
>gi|432333562|ref|ZP_19585328.1| rhomboid family protein [Rhodococcus wratislaviensis IFP 2016]
gi|430779509|gb|ELB94666.1| rhomboid family protein [Rhodococcus wratislaviensis IFP 2016]
Length = 249
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 81/188 (43%), Gaps = 30/188 (15%)
Query: 44 GYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVR- 102
G F + P AV+ Q+ R S H ++H+ NM AL +G + E ++G R
Sbjct: 55 GSKLFADWALFPPAVVDG-QIVRVLGSGFLHFGIIHLAVNMFALWVIGRDTELVLGRARY 113
Query: 103 -MFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGA 161
Y LL S A++ ++L V G SG +F L+ GA
Sbjct: 114 ACVYFVSLLGGSAAVM------------LFQLGAVTA----GASGAVFGLM-------GA 150
Query: 162 QSRSVFGLFNIPAKWYPLILL-VLFQVLMTNVSLLGHLCGILSGFAYTYGFF---NLLMP 217
Q+ + L PA +I + V+ + + +SL GHL G+++G A T G LL
Sbjct: 151 QAVILLRLRRSPAPVISVIAVNVIISITIPGISLWGHLGGLVAGAAATAGILYGPQLLGA 210
Query: 218 GTSFYSAI 225
G + AI
Sbjct: 211 GNNREKAI 218
>gi|422874373|ref|ZP_16920858.1| rhomboid family protein [Clostridium perfringens F262]
gi|380304681|gb|EIA16968.1| rhomboid family protein [Clostridium perfringens F262]
Length = 342
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 24/153 (15%)
Query: 56 SAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNA 115
+A+I + YR TS+ HG ++H+LFNM AL LG +ERI G+ + Y+ I +
Sbjct: 195 NAIIFHGEYYRLVTSMFLHGGIVHLLFNMYALYILGDFIERIYGAKK--YLAIYFVSG-- 250
Query: 116 ILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAK 175
+VA I VM +G SG IF L+ + + + A
Sbjct: 251 --------IVASIFSLYFSPVM---GVGASGAIFGLLGAALVFAYNEKDRIG-----KAL 294
Query: 176 WYPLILLVLFQVL----MTNVSLLGHLCGILSG 204
+I+++L V M+N+ + H G ++G
Sbjct: 295 VTNIIVIILLNVFIGLSMSNIDISAHFGGFIAG 327
>gi|167518123|ref|XP_001743402.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778501|gb|EDQ92116.1| predicted protein [Monosiga brevicollis MX1]
Length = 301
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 81/172 (47%), Gaps = 9/172 (5%)
Query: 64 VYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIAL 123
V R + + HG + H+ FN+ A + + +LE+ +GS R Y+ +++ + +L +
Sbjct: 6 VQRLFLFSLIHGDIFHLAFNLCAFIMVAPQLEKDLGSFRFAYLLLVVTLLLGLYYLFLTG 65
Query: 124 LVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILL- 182
+ A I + + CA GFSG + + +VI AQ+R G PA P+ ++
Sbjct: 66 IAA-IFYGEDSSFWYGCATGFSGNVLACMVIWVYSFTAQTRISIG----PAIELPITIMP 120
Query: 183 ---VLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLL 231
+L +L + + H+ G+ GF Y G+ + +ES+ L+
Sbjct: 121 PVLLLLSLLFRSATFWCHVMGLAVGFCYVQGWLRFVQLTDQHVQNLESTGLV 172
>gi|381394664|ref|ZP_09920376.1| hypothetical protein GPUN_1385 [Glaciecola punicea DSM 14233 = ACAM
611]
gi|379329631|dbj|GAB55509.1| hypothetical protein GPUN_1385 [Glaciecola punicea DSM 14233 = ACAM
611]
Length = 211
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 77/168 (45%), Gaps = 26/168 (15%)
Query: 46 DSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVR--M 103
D + L ++ Q +R +S HGS+LH+ FNM L LG +LE +GSVR +
Sbjct: 30 DMLTNMGLLYGPLVQDGQYWRMISSGFLHGSILHIAFNMYLLYMLGPQLESALGSVRFSL 89
Query: 104 FYITILLATSNAILHLLIALLVAHIPFYRLQNVMDE--CAIGFSGVIFSLIVIETSLSGA 161
Y L+ + A+L F +Q + +G +G +F + + +S
Sbjct: 90 MYFGALIGGTLAVLS-----------FGFMQPTLGASGAVLGLAGAMF-ITLWGRGISPT 137
Query: 162 QSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTY 209
+S VFGL ++L + +L+ +S GH G+++G A Y
Sbjct: 138 KS-PVFGL---------VVLNLGLPLLIPGISFWGHFGGVVAGGALAY 175
>gi|219849715|ref|YP_002464148.1| rhomboid family protein [Chloroflexus aggregans DSM 9485]
gi|219543974|gb|ACL25712.1| Rhomboid family protein [Chloroflexus aggregans DSM 9485]
Length = 271
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 65/136 (47%), Gaps = 26/136 (19%)
Query: 26 TSAVVIVCGTIYLI-CLLFGYDSFYE-----ICFLPSAVISRF---QVYRFYTSIVFHGS 76
T +++ + G +YL+ C+L G SF++ + L + V R +V+R T+ V H +
Sbjct: 47 TYSLLWIIGIVYLLSCVLSG--SFFQPTLSVLVVLGAKVNERIAAGEVWRLLTATVLHAN 104
Query: 77 LLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNV 136
L+H+ FN AL LG E ER G VR + +L +I Y L +
Sbjct: 105 LIHIFFNGYALSVLGPETERFYGHVRFLVLYLLSGVGGSIAS------------YALSSA 152
Query: 137 MDECAIGFSGVIFSLI 152
A+G SG IF LI
Sbjct: 153 ---PAVGASGAIFGLI 165
>gi|289807072|ref|ZP_06537701.1| intramembrane serine protease GlpG [Salmonella enterica subsp.
enterica serovar Typhi str. AG3]
Length = 106
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 38/57 (66%)
Query: 55 PSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLA 111
P + +F+V+R++T I H SL+H+LFN+L LG +E+ +GS ++ IT++ A
Sbjct: 21 PFDPVLKFEVWRYFTHIFMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITVISA 77
>gi|297621662|ref|YP_003709799.1| Rhomboid family protein [Waddlia chondrophila WSU 86-1044]
gi|297376963|gb|ADI38793.1| Rhomboid family protein [Waddlia chondrophila WSU 86-1044]
gi|337292982|emb|CCB90980.1| Rhomboid family protein [Waddlia chondrophila 2032/99]
Length = 387
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 17/96 (17%)
Query: 59 ISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRM-FYITILLATSNAIL 117
I +V+R +T I+ H + H+ FNM+ L+ LG ++E+ +G RM +I I A SN
Sbjct: 230 IREGEVWRLFTPILLHADIFHLFFNMIWLLVLGVQMEKRLGIFRMILFILISAAISNTAQ 289
Query: 118 HLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIV 153
+L+ P + IGFSGV+ +IV
Sbjct: 290 YLMSG------PDF----------IGFSGVLCGMIV 309
>gi|110799144|ref|YP_696141.1| rhomboid family protein [Clostridium perfringens ATCC 13124]
gi|168206356|ref|ZP_02632361.1| rhomboid family protein [Clostridium perfringens E str. JGS1987]
gi|169347261|ref|ZP_02866200.1| rhomboid family protein [Clostridium perfringens C str. JGS1495]
gi|110673791|gb|ABG82778.1| rhomboid family protein [Clostridium perfringens ATCC 13124]
gi|169296657|gb|EDS78788.1| rhomboid family protein [Clostridium perfringens C str. JGS1495]
gi|170662212|gb|EDT14895.1| rhomboid family protein [Clostridium perfringens E str. JGS1987]
Length = 342
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 24/153 (15%)
Query: 56 SAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNA 115
+A+I + YR TS+ HG ++H+LFNM AL LG +ERI G+ + Y+ I +
Sbjct: 195 NAIIFHGEYYRLVTSMFLHGGIVHLLFNMYALYILGDFIERIYGAKK--YLAIYFVSG-- 250
Query: 116 ILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAK 175
+VA I VM +G SG IF L+ + + + A
Sbjct: 251 --------IVASIFSLYFSPVM---GVGASGAIFGLLGAALVFAYNEKDRIG-----KAL 294
Query: 176 WYPLILLVLFQVL----MTNVSLLGHLCGILSG 204
+I+++L V M+N+ + H G ++G
Sbjct: 295 VTNIIVIILLNVFIGLSMSNIDISAHFGGFIAG 327
>gi|168214465|ref|ZP_02640090.1| rhomboid family protein [Clostridium perfringens CPE str. F4969]
gi|168216839|ref|ZP_02642464.1| rhomboid family protein [Clostridium perfringens NCTC 8239]
gi|422346116|ref|ZP_16427030.1| hypothetical protein HMPREF9476_01103 [Clostridium perfringens
WAL-14572]
gi|170714094|gb|EDT26276.1| rhomboid family protein [Clostridium perfringens CPE str. F4969]
gi|182381088|gb|EDT78567.1| rhomboid family protein [Clostridium perfringens NCTC 8239]
gi|373226738|gb|EHP49060.1| hypothetical protein HMPREF9476_01103 [Clostridium perfringens
WAL-14572]
Length = 342
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 24/153 (15%)
Query: 56 SAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNA 115
+A+I + YR TS+ HG ++H+LFNM AL LG +ERI G+ + Y+ I +
Sbjct: 195 NAIIFHGEYYRLVTSMFLHGGIVHLLFNMYALYILGDFIERIYGAKK--YLAIYFVSG-- 250
Query: 116 ILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAK 175
+VA I VM +G SG IF L+ + + + A
Sbjct: 251 --------IVASIFSLYFSPVM---GVGASGAIFGLLGAALVFAYNEKDRIG-----KAL 294
Query: 176 WYPLILLVLFQVL----MTNVSLLGHLCGILSG 204
+I+++L V M+N+ + H G ++G
Sbjct: 295 VTNIIVIILLNVFIGLSMSNIDISAHFGGFIAG 327
>gi|168210042|ref|ZP_02635667.1| rhomboid family protein [Clostridium perfringens B str. ATCC 3626]
gi|170711841|gb|EDT24023.1| rhomboid family protein [Clostridium perfringens B str. ATCC 3626]
Length = 342
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 24/153 (15%)
Query: 56 SAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNA 115
+A+I + YR TS+ HG ++H+LFNM AL LG +ERI G+ + Y+ I +
Sbjct: 195 NAIIFHGEYYRLVTSMFLHGGIVHLLFNMYALYILGDFIERIYGAKK--YLAIYFVSG-- 250
Query: 116 ILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAK 175
+VA I VM +G SG IF L+ + + + A
Sbjct: 251 --------IVASIFSLYFSPVM---GVGASGAIFGLLGAALVFAYNEKDRIG-----KAL 294
Query: 176 WYPLILLVLFQVL----MTNVSLLGHLCGILSG 204
+I+++L V M+N+ + H G ++G
Sbjct: 295 VTNIIVIILLNVFISLSMSNIDISAHFGGFIAG 327
>gi|449145674|ref|ZP_21776476.1| GlpG protein (membrane protein of glp regulon) [Vibrio mimicus CAIM
602]
gi|449078707|gb|EMB49639.1| GlpG protein (membrane protein of glp regulon) [Vibrio mimicus CAIM
602]
Length = 278
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 48/87 (55%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
FT ++ +C I+ + D+ + P+ ++Q++R+ + + H S++H+ FN+
Sbjct: 99 FTLFIMALCIAIFALQTFGAGDAIFNALHFPAQASQQWQIWRWVSHALLHFSVMHIAFNL 158
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
L G +LE+ +GS+++ + I+ A
Sbjct: 159 LWWWQFGGDLEQRLGSLKLIKLFIVSA 185
>gi|258626617|ref|ZP_05721447.1| glpG protein [Vibrio mimicus VM603]
gi|258581121|gb|EEW06040.1| glpG protein [Vibrio mimicus VM603]
Length = 278
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 48/87 (55%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
FT ++ +C I+ + D+ + P+ ++Q++R+ + + H S++H+ FN+
Sbjct: 99 FTLFIMALCIAIFALQTFGAGDAIFNALHFPAQASQQWQIWRWVSHALLHFSVMHIAFNL 158
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
L G +LE+ +GS+++ + I+ A
Sbjct: 159 LWWWQFGGDLEQRLGSLKLIKLFIVSA 185
>gi|414167426|ref|ZP_11423654.1| hypothetical protein HMPREF9696_01509 [Afipia clevelandensis ATCC
49720]
gi|410889758|gb|EKS37559.1| hypothetical protein HMPREF9696_01509 [Afipia clevelandensis ATCC
49720]
Length = 239
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 15/109 (13%)
Query: 27 SAVVIVCGTIY----LICLLFGYDSFYEICFLP-----SAVISRF------QVYRFYTSI 71
+AV++V I+ L+ L + + F+P S + +F +++ F T
Sbjct: 2 TAVIVVMAAIHGLRALLPLATDQEVIWTFGFVPARYDASVLAGKFPGGVGAEIWTFLTYA 61
Query: 72 VFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLL 120
H + H+ FNML ++P GS + R G+VR F + A + A+ HLL
Sbjct: 62 FLHADITHIAFNMLWMLPFGSAVARRFGTVRFFAFFAVTAIAGAVAHLL 110
>gi|262172861|ref|ZP_06040539.1| protein GlpG [Vibrio mimicus MB-451]
gi|261893937|gb|EEY39923.1| protein GlpG [Vibrio mimicus MB-451]
Length = 278
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 48/87 (55%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
FT ++ +C I+ + D+ + P+ ++Q++R+ + + H S++H+ FN+
Sbjct: 99 FTLFIMALCIAIFALQTFGAGDAIFNALHFPAQASQQWQIWRWVSHALLHFSVMHIAFNL 158
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
L G +LE+ +GS+++ + I+ A
Sbjct: 159 LWWWQFGGDLEQRLGSLKLIKLFIVSA 185
>gi|381186094|ref|ZP_09893669.1| rhomboid family protein [Flavobacterium frigoris PS1]
gi|379651890|gb|EIA10450.1| rhomboid family protein [Flavobacterium frigoris PS1]
Length = 248
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%)
Query: 46 DSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFY 105
D Y++ + S FQ ++ T + HG +H+ FNM AL GS LE I GS + +
Sbjct: 27 DGAYKMLAMYFPENSGFQYWQVITHMFMHGGYMHIFFNMFALYSFGSALESIWGSKKFLF 86
Query: 106 ITILLATSNAILH 118
I A+LH
Sbjct: 87 FYISCGLGAALLH 99
>gi|417352807|ref|ZP_12129926.1| GlpG protein [Salmonella enterica subsp. enterica serovar Gaminara
str. A4-567]
gi|353565564|gb|EHC31306.1| GlpG protein [Salmonella enterica subsp. enterica serovar Gaminara
str. A4-567]
Length = 166
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 73/164 (44%), Gaps = 32/164 (19%)
Query: 55 PSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSN 114
P + +F+ +R++T I H SL+H+LFN+L LG +E+ +GS ++ IT++ A +
Sbjct: 16 PFDPVLKFEFWRYFTHIFMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITVISALLS 75
Query: 115 AILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVI---------ETSLSGAQSRS 165
Y Q G SGV+++L+ ++ + +
Sbjct: 76 G---------------YVQQKFSGPWFGGLSGVVYALMGYVWLRGERDPQSGIYLQRGLI 120
Query: 166 VFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTY 209
+F L I A W+ F + M N + H+ G++ G A +
Sbjct: 121 IFALLWIVAGWFD-----WFGMSMANGA---HIAGLIVGLAMAF 156
>gi|262163664|ref|ZP_06031405.1| protein GlpG [Vibrio mimicus VM223]
gi|262027880|gb|EEY46544.1| protein GlpG [Vibrio mimicus VM223]
Length = 278
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 48/87 (55%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
FT ++ +C I+ + D+ + P+ ++Q++R+ + + H S++H+ FN+
Sbjct: 99 FTLFIMALCIAIFALQTFGAGDAIFNALHFPAQASQQWQIWRWVSHALLHFSVMHIAFNL 158
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
L G +LE+ +GS+++ + I+ A
Sbjct: 159 LWWWQFGGDLEQRLGSLKLIKLFIVSA 185
>gi|238788988|ref|ZP_04632778.1| Rhomboid protease glpG [Yersinia frederiksenii ATCC 33641]
gi|238723015|gb|EEQ14665.1| Rhomboid protease glpG [Yersinia frederiksenii ATCC 33641]
Length = 278
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 48/87 (55%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
T +V+++C IY++ + G + P Q++R+ + + H SLLH+LFN+
Sbjct: 97 LTLSVMVLCIAIYILMQIVGDAAVMSWLAWPRDSSQYLQIWRWVSHALLHFSLLHILFNL 156
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
+ L ++E+ +G+ ++ +TI+ A
Sbjct: 157 MWWWYLAGQMEKRLGTGKLLVLTIVSA 183
>gi|417304444|ref|ZP_12091465.1| glpG protein [Rhodopirellula baltica WH47]
gi|327539221|gb|EGF25844.1| glpG protein [Rhodopirellula baltica WH47]
Length = 340
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 55/93 (59%), Gaps = 11/93 (11%)
Query: 59 ISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILH 118
I + +++R T HGS +H++FNM+AL LGS +ER+ GS F ++LL + H
Sbjct: 195 IKKGEIWRLVTPAFLHGSTMHLVFNMMALFTLGSVVERLHGS--WFLASLLLVS-----H 247
Query: 119 LLIALLVAHIPFYRLQNVMDECAIGFSGVIFSL 151
++ ++ +P + L++ M A+G SG +F +
Sbjct: 248 IIGIIVQVVLPDW-LESPM---AVGASGAVFGV 276
>gi|294638143|ref|ZP_06716399.1| rhomboid protease GlpG [Edwardsiella tarda ATCC 23685]
gi|451966130|ref|ZP_21919384.1| rhomboid protease GlpG [Edwardsiella tarda NBRC 105688]
gi|291088710|gb|EFE21271.1| rhomboid protease GlpG [Edwardsiella tarda ATCC 23685]
gi|451314909|dbj|GAC64746.1| rhomboid protease GlpG [Edwardsiella tarda NBRC 105688]
Length = 276
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 47/86 (54%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T V ++C +YL L G + P+ +Q++R++T + H S LH++FN++
Sbjct: 98 TIGVTLLCILVYLCQLALGDGAVMTYLAWPADAAQHYQLWRYFTPALLHFSPLHIIFNLM 157
Query: 86 ALVPLGSELERIMGSVRMFYITILLA 111
LG ++E+ +G+ ++ I ++ A
Sbjct: 158 WWWYLGGQVEKRLGASKLAQIMLVSA 183
>gi|90412722|ref|ZP_01220723.1| hypothetical GlpG protein [Photobacterium profundum 3TCK]
gi|90326297|gb|EAS42716.1| hypothetical GlpG protein [Photobacterium profundum 3TCK]
Length = 280
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 48/87 (55%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
F+ +V++V IY++ +++ P ++QV+RF++ + H S LH++FN
Sbjct: 99 FSLSVMVVVIAIYILWFFGLQQPLFDLFHFPFMDGDQWQVWRFFSHALIHFSALHIIFNC 158
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
L LG +LER GS ++ + ++ A
Sbjct: 159 LWWWILGGQLERHSGSAKLVQVFLISA 185
>gi|390436332|ref|ZP_10224870.1| intramembrane serine protease GlpG [Pantoea agglomerans IG1]
Length = 273
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
T ++++C I+++ + G + P A QV+R+++ + H SLLH+LFN+
Sbjct: 95 LTMTLMVLCIAIFILMQVMGDRTVMAWLSWPDAD-QHLQVWRWFSHALLHFSLLHILFNL 153
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
+ LG +E+ +GS ++F I ++ A
Sbjct: 154 MWWWYLGGAVEKRLGSGKLFVILLISA 180
>gi|336319156|ref|YP_004599124.1| Rhomboid family protein [[Cellvibrio] gilvus ATCC 13127]
gi|336102737|gb|AEI10556.1| Rhomboid family protein [[Cellvibrio] gilvus ATCC 13127]
Length = 299
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 70/145 (48%), Gaps = 22/145 (15%)
Query: 65 YRFYTSIVFH--GSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIA 122
+RF TS H GS+ H++ NM+AL +G LE +G VR + +L A +++ LL+A
Sbjct: 107 WRFLTSAFLHSPGSIFHIVLNMVALWTVGPYLEVQLGRVRYATLYLLSAIGGSVVVLLVA 166
Query: 123 LLVAHIPFYRLQNVMDECAIGFSGVIFSLI---VIETSLSGAQSRSVFGLFNIPAKWYPL 179
L +Y +G SG +F L + SG ++ + G+ +
Sbjct: 167 AL-GWSDWY-------SGVVGASGAVFGLFGAAFVVMWRSGHPAQGMLGVIGVN------ 212
Query: 180 ILLVLFQVLMTNVSLLGHLCGILSG 204
++F ++ +S GHL G+++G
Sbjct: 213 ---MVFSFVVPGISWQGHLGGLVTG 234
>gi|372275765|ref|ZP_09511801.1| intramembrane serine protease GlpG [Pantoea sp. SL1_M5]
Length = 273
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
T ++++C I+++ + G + P A QV+R+++ + H SLLH+LFN+
Sbjct: 95 LTMTLMVLCIAIFILMQVMGDRTVMAWLSWPDAD-QHLQVWRWFSHALLHFSLLHILFNL 153
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
+ LG +E+ +GS ++F I ++ A
Sbjct: 154 MWWWYLGGAVEKRLGSGKLFVILLISA 180
>gi|423126159|ref|ZP_17113838.1| rhomboid protease glpG [Klebsiella oxytoca 10-5250]
gi|376397731|gb|EHT10361.1| rhomboid protease glpG [Klebsiella oxytoca 10-5250]
Length = 274
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 48/86 (55%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T V+ C ++++ + G + P +F+V+R+++ + H SL+H+LFN+L
Sbjct: 95 TWGVLFACIVVFVLQTVIGDQPVMLLLAWPYDPSLKFEVWRYFSHALMHFSLMHILFNLL 154
Query: 86 ALVPLGSELERIMGSVRMFYITILLA 111
LG +E+ +GS ++ IT++ A
Sbjct: 155 WWWYLGGAVEKRIGSGKLVVITVISA 180
>gi|418309099|ref|ZP_12920674.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21194]
gi|365235250|gb|EHM76170.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21194]
Length = 364
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 85/191 (44%), Gaps = 28/191 (14%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSLLHV 80
T ++ V I+L C++ ++F ++ L + F V YR TS+ H S H+
Sbjct: 160 TYTIIFVNVLIWL-CMILYLNNFSDVKLLDVGGLVHFNVVHGEWYRIVTSMFLHFSFEHI 218
Query: 81 LFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDEC 140
L NML+L G +E I+GS RM + IA L + F L
Sbjct: 219 LMNMLSLFIFGKIVEAIIGSWRMLTV------------YFIAGLFGN--FVSLSFNTTTI 264
Query: 141 AIGFSGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGH 197
++G SG IF L I +S ++ + G I L++LV + M+N++++ H
Sbjct: 265 SVGASGAIFGLIGSIFAMMYVSKTFNKKMLGQLLI-----ALVILVGVSLFMSNINIVAH 319
Query: 198 LCGILSGFAYT 208
+ G + G T
Sbjct: 320 IGGFIGGLLIT 330
>gi|312193973|ref|YP_004014034.1| rhomboid family protein [Frankia sp. EuI1c]
gi|311225309|gb|ADP78164.1| Rhomboid family protein [Frankia sp. EuI1c]
Length = 390
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 58 VISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAIL 117
+ + + +R T+ HGS+LH+ FNM AL LG++LE I+G VR + A L
Sbjct: 217 IAQKHEYWRLVTAAFLHGSVLHIAFNMYALFLLGTQLEAILGRVRYLALFFACAIGGNTL 276
Query: 118 HLLI 121
+I
Sbjct: 277 SYVI 280
>gi|334324996|ref|XP_001379078.2| PREDICTED: rhomboid domain-containing protein 2-like [Monodelphis
domestica]
Length = 371
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 82/165 (49%), Gaps = 7/165 (4%)
Query: 51 ICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILL 110
+ P+A+ ++VYR T I+ + L +L ++ + E+ +G+VR + T++
Sbjct: 61 LALRPAALRRDWEVYRLVTYILVYEHPLSLLSGIVIIWRFAGSFEKSVGTVRHSFFTLVF 120
Query: 111 ATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLF 170
A +A+L +L+ L A F +++ GF+ V F+++ + +S+ R++F
Sbjct: 121 AFFSALLFVLLETLWALAGFGGVEDPR-----GFTPVAFAMLGV-SSIRTRMRRTLFFGV 174
Query: 171 NIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLL 215
+ A P ILL + S L ++CG+ GF Y G+ + L
Sbjct: 175 PVSASVIPWILL-FASWFIPQTSFLSNICGLSIGFIYGLGYCSCL 218
>gi|326931300|ref|XP_003211770.1| PREDICTED: rhomboid domain-containing protein 2-like [Meleagris
gallopavo]
Length = 332
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 115/274 (41%), Gaps = 40/274 (14%)
Query: 64 VYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIAL 123
V+R T I + L+ + + + E+ +G+V+ + TI+ A +L+LL+
Sbjct: 6 VHRLVTYIFVYEDLISLTCGAIVIWYFAGSFEKKVGTVKHCFFTIVFAILTGLLYLLLET 65
Query: 124 LVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLV 183
+V+ R+ V D A GF + F+ + + T+ S + R++F F +P P LL
Sbjct: 66 VVS-----RVSEVED--AKGFMPLAFATLSVSTTRSRMK-RALFFGFRVPVMLVPWFLLF 117
Query: 184 LFQVLMTNVSLLGHLCGILSGFAYTYGF-FNLLMPGTSFYSAIESSSLLSTCIRQPKFIL 242
+ + + SLL +LCG+L G AY G+ F L +P S S ++ S + P
Sbjct: 118 VVW-FIPHSSLLSNLCGLLVGKAYGLGYCFCLDLP-ESVASKLDQRFPFSVLKKIPGLKY 175
Query: 243 CTGGNPS-------------GYIPTYSGQNTSSSGLFSGNIWSNLSSWMPQRETSSQPTQ 289
G + G PT S +S S L +S M SQ Q
Sbjct: 176 IPGSSAERRATESSKITPLPGTYPTQSYYCSSPSAL--------PASQMQHPGVQSQGFQ 227
Query: 290 DSRFPGRGRTLSSSQSPVH-------VDSNLQAR 316
DS PG G L P H V S QAR
Sbjct: 228 DSCTPGFGHALGHV-GPQHSYARYSLVSSPYQAR 260
>gi|375098380|ref|ZP_09744643.1| putative membrane protein [Saccharomonospora cyanea NA-134]
gi|374659112|gb|EHR58990.1| putative membrane protein [Saccharomonospora cyanea NA-134]
Length = 333
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 71/158 (44%), Gaps = 21/158 (13%)
Query: 48 FYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYIT 107
F + P V+ + +R TS H LLH+ NMLAL LG +LE ++G VR +
Sbjct: 141 FNDGVLWPEVVVLFDEWWRLLTSGFLHYGLLHLAMNMLALWVLGRDLEMLLGRVRFLAVY 200
Query: 108 ILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVF 167
L ++ + + A G SG I+ L+ GA +V
Sbjct: 201 FL------------SMFAGGAAVFVFGDPATGTA-GASGAIYGLM-------GAILVAVL 240
Query: 168 GLFNIPAKWYPLILL-VLFQVLMTNVSLLGHLCGILSG 204
L P +I+L V+ V + N+SLLGHL G+++G
Sbjct: 241 RLRLNPTTAIGIIVLNVIISVSIPNISLLGHLGGLVAG 278
>gi|417822265|ref|ZP_12468866.1| rhomboid protease glpG [Vibrio cholerae HE48]
gi|421348978|ref|ZP_15799348.1| rhomboid protease glpG [Vibrio cholerae HE-25]
gi|340049701|gb|EGR10614.1| rhomboid protease glpG [Vibrio cholerae HE48]
gi|395956827|gb|EJH67417.1| rhomboid protease glpG [Vibrio cholerae HE-25]
Length = 277
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 48/87 (55%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
FT ++ +C I+ + D+ + P+ ++Q++R+ + + H S++H+ FN+
Sbjct: 99 FTLFIMALCIIIFTLQTFGAGDAVFNALHFPALAGQQWQIWRWVSHALLHFSVMHIAFNL 158
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
L G +LE+ +GSVR+ + ++ A
Sbjct: 159 LWWWQFGGDLEQRLGSVRLIKLFVVSA 185
>gi|229525000|ref|ZP_04414405.1| protein GlpG [Vibrio cholerae bv. albensis VL426]
gi|229338581|gb|EEO03598.1| protein GlpG [Vibrio cholerae bv. albensis VL426]
Length = 277
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 48/87 (55%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
FT ++ +C I+ + D+ + P+ ++Q++R+ + + H S++H+ FN+
Sbjct: 99 FTLFIMALCIIIFTLQTFGAGDAVFNALHFPALAGQQWQIWRWVSHALLHFSVMHIAFNL 158
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
L G +LE+ +GSVR+ + ++ A
Sbjct: 159 LWWWQFGGDLEQRLGSVRLIKLFVVSA 185
>gi|91977738|ref|YP_570397.1| rhomboid-like protein [Rhodopseudomonas palustris BisB5]
gi|91684194|gb|ABE40496.1| Rhomboid-like protein [Rhodopseudomonas palustris BisB5]
Length = 375
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Query: 37 YLICLLFGY-DSFYEICFL--PSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSE 93
Y +FG+ Y+ L P A S +V+ F T + H +L H++FN+L L+P GS
Sbjct: 168 YWTIEVFGFIPKRYDATLLATPFAGGSGAKVWSFVTYSLLHANLSHIIFNVLWLLPFGSA 227
Query: 94 LERIMGSVRMFYITILLATSNAILHLL 120
+ R G+ R F + A A+ HL+
Sbjct: 228 VARRFGAARFFLFMAVTAVGGALAHLV 254
>gi|378732203|gb|EHY58662.1| glycosylphosphatidylinositol transamidase [Exophiala dermatitidis
NIH/UT8656]
Length = 284
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 78/181 (43%), Gaps = 15/181 (8%)
Query: 64 VYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITI-LLATSNAILHLLIA 122
+YR T H H+L + + L+PL E G++ + + L A ++LL+
Sbjct: 73 LYRLNTFAFIHNGFWHMLMDAICLIPLLERFEAEWGTLNSLALFMGPLGQIPAGIYLLLD 132
Query: 123 LLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGL--FNIPAKWYPLI 180
++ + D + S + L++ S+ ++ F + IP PL+
Sbjct: 133 GVI----------LRDNTPVVGSSIWVFLLLASESIKTYKANPHFEISGHQIPTWISPLV 182
Query: 181 LLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKF 240
+LV+ L+ N S LGHL G ++G+ + G+ L P IE L+ R P +
Sbjct: 183 ILVVTSALIPNTSFLGHLSGCITGYLWGLGYIRFLAPPEKVLRWIEGK--LNLLGRLPHY 240
Query: 241 I 241
+
Sbjct: 241 V 241
>gi|422921353|ref|ZP_16954592.1| rhomboid protease glpG [Vibrio cholerae BJG-01]
gi|341649159|gb|EGS73154.1| rhomboid protease glpG [Vibrio cholerae BJG-01]
Length = 277
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 48/87 (55%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
FT ++ +C I+ + D+ + P+ ++Q++R+ + + H S++H+ FN+
Sbjct: 99 FTLFIMALCIIIFTLQTFGAGDAVFNALHFPALAGQQWQIWRWVSHALLHFSVMHIAFNL 158
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
L G +LE+ +GSVR+ + ++ A
Sbjct: 159 LWWWQFGGDLEQRLGSVRLIKLFVVSA 185
>gi|229520103|ref|ZP_04409531.1| protein GlpG [Vibrio cholerae TM 11079-80]
gi|417818703|ref|ZP_12465324.1| rhomboid protease glpG [Vibrio cholerae HE39]
gi|419827803|ref|ZP_14351296.1| rhomboid family protein [Vibrio cholerae HC-1A2]
gi|419831465|ref|ZP_14354935.1| rhomboid family protein [Vibrio cholerae HC-61A2]
gi|419835040|ref|ZP_14358489.1| rhomboid protease glpG [Vibrio cholerae HC-46B1]
gi|421341678|ref|ZP_15792088.1| rhomboid protease glpG [Vibrio cholerae HC-43B1]
gi|421352868|ref|ZP_15803207.1| rhomboid protease glpG [Vibrio cholerae HE-45]
gi|422305515|ref|ZP_16392716.1| rhomboid family protein [Vibrio cholerae CP1035(8)]
gi|422915833|ref|ZP_16950190.1| rhomboid protease glpG [Vibrio cholerae HC-02A1]
gi|423733384|ref|ZP_17706618.1| rhomboid family protein [Vibrio cholerae HC-41B1]
gi|423810741|ref|ZP_17714783.1| rhomboid family protein [Vibrio cholerae HC-55C2]
gi|423845600|ref|ZP_17718556.1| rhomboid family protein [Vibrio cholerae HC-59A1]
gi|423877813|ref|ZP_17722186.1| rhomboid family protein [Vibrio cholerae HC-60A1]
gi|423943381|ref|ZP_17733042.1| rhomboid family protein [Vibrio cholerae HE-40]
gi|423973235|ref|ZP_17736587.1| rhomboid family protein [Vibrio cholerae HE-46]
gi|423996006|ref|ZP_17739526.1| rhomboid protease glpG [Vibrio cholerae HC-02C1]
gi|424007683|ref|ZP_17750642.1| rhomboid protease glpG [Vibrio cholerae HC-44C1]
gi|424014917|ref|ZP_17754808.1| rhomboid protease glpG [Vibrio cholerae HC-55B2]
gi|424018061|ref|ZP_17757874.1| rhomboid protease glpG [Vibrio cholerae HC-59B1]
gi|424623440|ref|ZP_18061928.1| rhomboid protease glpG [Vibrio cholerae HC-50A1]
gi|424628010|ref|ZP_18066333.1| rhomboid protease glpG [Vibrio cholerae HC-51A1]
gi|424631961|ref|ZP_18070093.1| rhomboid protease glpG [Vibrio cholerae HC-52A1]
gi|424635046|ref|ZP_18073080.1| rhomboid protease glpG [Vibrio cholerae HC-55A1]
gi|424638872|ref|ZP_18076780.1| rhomboid protease glpG [Vibrio cholerae HC-56A1]
gi|424647124|ref|ZP_18084815.1| rhomboid protease glpG [Vibrio cholerae HC-57A1]
gi|443525998|ref|ZP_21092101.1| rhomboid protease glpG [Vibrio cholerae HC-78A1]
gi|229342891|gb|EEO07881.1| protein GlpG [Vibrio cholerae TM 11079-80]
gi|340044052|gb|EGR05007.1| rhomboid protease glpG [Vibrio cholerae HE39]
gi|341641853|gb|EGS66370.1| rhomboid protease glpG [Vibrio cholerae HC-02A1]
gi|395947262|gb|EJH57918.1| rhomboid protease glpG [Vibrio cholerae HC-43B1]
gi|395956664|gb|EJH67257.1| rhomboid protease glpG [Vibrio cholerae HE-45]
gi|408017440|gb|EKG54943.1| rhomboid protease glpG [Vibrio cholerae HC-50A1]
gi|408023031|gb|EKG60212.1| rhomboid protease glpG [Vibrio cholerae HC-52A1]
gi|408028233|gb|EKG65138.1| rhomboid protease glpG [Vibrio cholerae HC-56A1]
gi|408028617|gb|EKG65492.1| rhomboid protease glpG [Vibrio cholerae HC-55A1]
gi|408038536|gb|EKG74873.1| rhomboid protease glpG [Vibrio cholerae HC-57A1]
gi|408059966|gb|EKG94693.1| rhomboid protease glpG [Vibrio cholerae HC-51A1]
gi|408624554|gb|EKK97498.1| rhomboid family protein [Vibrio cholerae HC-1A2]
gi|408628613|gb|EKL01344.1| rhomboid family protein [Vibrio cholerae CP1035(8)]
gi|408632489|gb|EKL04940.1| rhomboid family protein [Vibrio cholerae HC-41B1]
gi|408637374|gb|EKL09436.1| rhomboid family protein [Vibrio cholerae HC-55C2]
gi|408645123|gb|EKL16789.1| rhomboid family protein [Vibrio cholerae HC-60A1]
gi|408646308|gb|EKL17922.1| rhomboid family protein [Vibrio cholerae HC-59A1]
gi|408652614|gb|EKL23824.1| rhomboid family protein [Vibrio cholerae HC-61A2]
gi|408662557|gb|EKL33489.1| rhomboid family protein [Vibrio cholerae HE-40]
gi|408666539|gb|EKL37323.1| rhomboid family protein [Vibrio cholerae HE-46]
gi|408855512|gb|EKL95213.1| rhomboid protease glpG [Vibrio cholerae HC-02C1]
gi|408859482|gb|EKL99140.1| rhomboid protease glpG [Vibrio cholerae HC-46B1]
gi|408862817|gb|EKM02318.1| rhomboid protease glpG [Vibrio cholerae HC-55B2]
gi|408868110|gb|EKM07455.1| rhomboid protease glpG [Vibrio cholerae HC-44C1]
gi|408871445|gb|EKM10685.1| rhomboid protease glpG [Vibrio cholerae HC-59B1]
gi|443455633|gb|ELT19397.1| rhomboid protease glpG [Vibrio cholerae HC-78A1]
Length = 277
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 48/87 (55%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
FT ++ +C I+ + D+ + P+ ++Q++R+ + + H S++H+ FN+
Sbjct: 99 FTLFIMALCIIIFTLQTFGAGDAVFNALHFPALAGQQWQIWRWVSHALLHFSVMHIAFNL 158
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
L G +LE+ +GSVR+ + ++ A
Sbjct: 159 LWWWQFGGDLEQRLGSVRLIKLFVVSA 185
>gi|153801698|ref|ZP_01956284.1| glpG protein [Vibrio cholerae MZO-3]
gi|124122791|gb|EAY41534.1| glpG protein [Vibrio cholerae MZO-3]
Length = 277
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 48/87 (55%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
FT ++ +C I+ + D+ + P+ ++Q++R+ + + H S++H+ FN+
Sbjct: 99 FTLFIMALCIIIFTLQTFGAGDAVFNALHFPALTGQQWQIWRWVSHALLHFSVMHIAFNL 158
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
L G +LE+ +GSVR+ + ++ A
Sbjct: 159 LWWWQFGGDLEQRLGSVRLIKLFVVSA 185
>gi|334335573|ref|YP_004540725.1| rhomboid family protein [Isoptericola variabilis 225]
gi|334105941|gb|AEG42831.1| Rhomboid family protein [Isoptericola variabilis 225]
Length = 292
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 23/192 (11%)
Query: 20 ESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGS--L 77
+ P T ++ +C + + L G+ + F SA + +RF T+ H + +
Sbjct: 77 SATPVVTYTLIGLCVVSFALQLTVGHAWSQQWAF--SAATGVVEPWRFLTAAFLHSTSGV 134
Query: 78 LHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVM 137
LH+LFNM AL G LE ++G R + +L A ++ LL+A A +Y Q V
Sbjct: 135 LHILFNMWALWITGQALEPLLGRGRFVVLALLSAVGGSVGWLLLAGGPADGTWY--QGV- 191
Query: 138 DECAIGFSGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSL 194
+G SG++F L ++ G +R + L I + ++ ++
Sbjct: 192 ----VGASGMVFGLFGALIPVLRRMGGSARQIVVLLAING---------VIGFVVPGIAW 238
Query: 195 LGHLCGILSGFA 206
HL G+++G A
Sbjct: 239 QAHLGGLVTGLA 250
>gi|412988172|emb|CCO17508.1| predicted protein [Bathycoccus prasinos]
Length = 329
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 13/201 (6%)
Query: 14 RANQWWESIP---FFTSAVVIVCGTIYLICLLFGYDSFYEI---CFLPSAVISRFQVYRF 67
R Q ++++P T V+ V + Y D +I CF P+ V+ F++ R
Sbjct: 26 RMYQQYQAVPNKPHGTLVVMAVMASYYFEVFPLLNDIIGDISSACFSPAKVLRDFELQRT 85
Query: 68 YTSIVFHGSLLHVLFNMLALVPLGSEL-ERIMGSVRMFYITILLATSNAILHLLIALLVA 126
S HG LH+ +N+ +L+ G +L ER G F +L + + H A++
Sbjct: 86 LFSSFVHGDELHLAYNLSSLLTKGIKLEERYGGKAEKF--VLLFCLVSVLTHGFAAIIAG 143
Query: 127 HIPFYRL--QNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVL 184
+ L +V G SGV+F+L I + + S FGL +PA L + L
Sbjct: 144 GLFHSGLFDGDVYYNATYGSSGVLFALQTIVLGENPRGNYSFFGL-QVPAHRLALTEVGL 202
Query: 185 FQVLM-TNVSLLGHLCGILSG 204
++ + ++L+ H+ GIL+G
Sbjct: 203 LYLMNPSTLNLIVHVSGILAG 223
>gi|293393410|ref|ZP_06637721.1| rhomboid protease GlpG [Serratia odorifera DSM 4582]
gi|291424011|gb|EFE97229.1| rhomboid protease GlpG [Serratia odorifera DSM 4582]
Length = 295
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 48/87 (55%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
T V+++C +YL+ + G D+ P Q++R+ + + H SLLH++FN+
Sbjct: 114 LTLTVMVLCILVYLLMQVLGDDNVMYWLSWPQNSEQYSQLWRWVSHALLHFSLLHIIFNL 173
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
L LG +E+ +G+ ++F + ++ A
Sbjct: 174 LWWWYLGGPMEKRLGAGKLFVLAVVSA 200
>gi|118138503|pdb|2IRV|A Chain A, Crystal Structure Of Glpg, A Rhomboid Intramembrane Serine
Protease
gi|118138504|pdb|2IRV|B Chain B, Crystal Structure Of Glpg, A Rhomboid Intramembrane Serine
Protease
Length = 182
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T ++I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 6 TWVMMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLL 65
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ ALL ++ Q G S
Sbjct: 66 WWWYLGGAVEKRLGSGKLIVIT-----------LISALLSGYVQ----QKFSGPWFGGLS 110
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 111 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFD-----LFGMSMANGA--- 162
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 163 HIAGLAVGLAMAF 175
>gi|429758897|ref|ZP_19291409.1| peptidase, S54 family [Actinomyces sp. oral taxon 181 str. F0379]
gi|429172593|gb|EKY14141.1| peptidase, S54 family [Actinomyces sp. oral taxon 181 str. F0379]
Length = 264
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 97/227 (42%), Gaps = 27/227 (11%)
Query: 12 STRANQWWE-----SIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYR 66
+ R QW P T A++ VC +++ +L + F P + +Q +R
Sbjct: 32 AARPRQWGSIRVSAQTPVVTYAIIGVCVALWVGDILTKGVITQYLGFTP--IHGLYQPWR 89
Query: 67 FYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVA 126
T+ H +L+H+ FNM++L +G LE +G ++ LL+ L +L +L+
Sbjct: 90 ILTTAFLHVNLMHIAFNMVSLYAIGRALEPALGR-GPYFCLYLLSALGGTLGVLGWVLID 148
Query: 127 HIPFYRLQNVMDECAIGFSGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLV 183
P L +G SG IF L + + +G R+V GL + +
Sbjct: 149 --PSSAL-----TVTVGASGAIFGLFGSVFVLQRAAGIDVRAVVGLLAVN---------L 192
Query: 184 LFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSL 230
L+ +++ VS HL G+L G T+G L P + + + L
Sbjct: 193 LYGFIVSGVSWQAHLGGLLFGMLATWGMLALGKPRSGMTAKKQRRRL 239
>gi|153829084|ref|ZP_01981751.1| glpG protein [Vibrio cholerae 623-39]
gi|148875412|gb|EDL73547.1| glpG protein [Vibrio cholerae 623-39]
Length = 277
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 48/87 (55%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
FT ++ +C I+ + D+ + P+ ++Q++R+ + + H S++H+ FN+
Sbjct: 99 FTLFIMALCIIIFTLQTFGAGDAVFNALHFPALAGQQWQIWRWVSHALLHFSVMHIAFNL 158
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
L G +LE+ +GSVR+ + ++ A
Sbjct: 159 LWWWQFGGDLEQRLGSVRLIKLFVVSA 185
>gi|118138334|pdb|2IC8|A Chain A, Crystal Structure Of Glpg
gi|119390593|pdb|2NRF|A Chain A, Crystal Structure Of Glpg, A Rhomboid Family Intramembrane
Protease
gi|119390594|pdb|2NRF|B Chain B, Crystal Structure Of Glpg, A Rhomboid Family Intramembrane
Protease
gi|390980879|pdb|3UBB|A Chain A, The Crystal Structure Of Glpg In Complex With A
Phosphonofluoridate Inhibitor
Length = 182
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T ++I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 7 TWVMMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLL 66
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ ALL ++ Q G S
Sbjct: 67 WWWYLGGAVEKRLGSGKLIVIT-----------LISALLSGYVQ----QKFSGPWFGGLS 111
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 112 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFD-----LFGMSMANGA--- 163
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 164 HIAGLAVGLAMAF 176
>gi|290958988|ref|YP_003490170.1| hypothetical protein SCAB_45641 [Streptomyces scabiei 87.22]
gi|260648514|emb|CBG71625.1| putative integral membrane protein [Streptomyces scabiei 87.22]
Length = 297
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 19/96 (19%)
Query: 59 ISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLAT---SNA 115
++ Q YR TS+ HGS+ H+LFNML+L +G LE +G R Y+T+ A+ +A
Sbjct: 128 VAEGQWYRLVTSMFLHGSVTHILFNMLSLWWIGGPLEAALGRAR--YLTLYFASGLAGSA 185
Query: 116 ILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSL 151
+ +LL A ++ ++G SG IF L
Sbjct: 186 LTYLLAA--------------PNQPSLGASGAIFGL 207
>gi|153826617|ref|ZP_01979284.1| glpG protein [Vibrio cholerae MZO-2]
gi|149739555|gb|EDM53779.1| glpG protein [Vibrio cholerae MZO-2]
Length = 258
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 48/87 (55%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
FT ++ +C I+ + D+ + P+ ++Q++R+ + + H S++H+ FN+
Sbjct: 80 FTLFIMALCIIIFTLQTFGAGDAVFNALHFPALAGQQWQIWRWVSHALLHFSVMHIAFNL 139
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
L G +LE+ +GSVR+ + ++ A
Sbjct: 140 LWWWQFGGDLEQRLGSVRLIKLFVVSA 166
>gi|365538131|ref|ZP_09363306.1| Integral membrane protein (Rhomboid family) [Vibrio ordalii ATCC
33509]
Length = 277
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T V++VC I+ + + + P+ ++Q++R+++ + H S+LH++FN+L
Sbjct: 100 TLGVMMVCTIIFALQQFGLANQVFSALHFPALAGQQWQIWRWFSHALLHFSVLHIVFNLL 159
Query: 86 ALVPLGSELERIMGSVR---MFYITILLATS 113
LG ++E+ +GS + +F ++ LL+ +
Sbjct: 160 WWWQLGGDVEKRLGSFKLGQLFLVSALLSGA 190
>gi|148657883|ref|YP_001278088.1| rhomboid family protein [Roseiflexus sp. RS-1]
gi|148569993|gb|ABQ92138.1| Rhomboid family protein [Roseiflexus sp. RS-1]
Length = 283
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 22/113 (19%)
Query: 63 QVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIA 122
Q YRF T++ HGS+ H+ FN AL LG E ERI GS R + ++ ++
Sbjct: 98 QYYRFLTAMFLHGSIAHLFFNSFALYSLGFEAERIFGSQRFLALYLIAGLGGGVMS---- 153
Query: 123 LLVAHIPFYRLQNVMDECAIGFSGVIFSLI-------VIETSLSGAQSRSVFG 168
A P ++G SG IF LI V+ S+ G +R G
Sbjct: 154 --YAFNP---------NPSVGASGAIFGLIGALIAFYVVARSVLGGIARQQLG 195
>gi|308387764|pdb|2XOV|A Chain A, Crystal Structure Of E.Coli Rhomboid Protease Glpg, Native
Enzyme
Length = 181
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T ++I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 7 TWVMMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLL 66
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ ALL ++ Q G S
Sbjct: 67 WWWYLGGAVEKRLGSGKLIVIT-----------LISALLSGYVQ----QKFSGPWFGGLS 111
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 112 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFD-----LFGMSMANGA--- 163
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 164 HIAGLAVGLAMAF 176
>gi|229527154|ref|ZP_04416548.1| protein GlpG [Vibrio cholerae 12129(1)]
gi|254291843|ref|ZP_04962627.1| glpG protein [Vibrio cholerae AM-19226]
gi|384423452|ref|YP_005632810.1| GlpG protein (membrane protein of glp regulon) [Vibrio cholerae
LMA3984-4]
gi|150422279|gb|EDN14242.1| glpG protein [Vibrio cholerae AM-19226]
gi|229335385|gb|EEO00868.1| protein GlpG [Vibrio cholerae 12129(1)]
gi|327483005|gb|AEA77412.1| GlpG protein (membrane protein of glp regulon) [Vibrio cholerae
LMA3984-4]
Length = 277
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 48/87 (55%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
FT ++ +C I+ + D+ + P+ ++Q++R+ + + H S++H+ FN+
Sbjct: 99 FTLFIMALCIIIFTLQTFGAGDAVFNALHFPALAGQQWQIWRWVSHALLHFSVMHIAFNL 158
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
L G +LE+ +GSVR+ + ++ A
Sbjct: 159 LWWWQFGGDLEQRLGSVRLIKLFVVSA 185
>gi|440705184|ref|ZP_20885986.1| peptidase, S54 family [Streptomyces turgidiscabies Car8]
gi|440273071|gb|ELP61867.1| peptidase, S54 family [Streptomyces turgidiscabies Car8]
Length = 298
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 47/97 (48%), Gaps = 13/97 (13%)
Query: 55 PSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSN 114
P ++ Q YR TS+ HGSL+H++FNML+L LG LE +G R Y+ + L +
Sbjct: 126 PVEGVAEGQWYRLLTSMFLHGSLMHIVFNMLSLWWLGGPLEAALGRAR--YLALYLVSGL 183
Query: 115 AILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSL 151
A L L P ++G SG IF L
Sbjct: 184 AGSALTYLLEAPTTP-----------SLGASGAIFGL 209
>gi|385786394|ref|YP_005817503.1| intramembrane serine protease GlpG [Erwinia sp. Ejp617]
gi|310765666|gb|ADP10616.1| intramembrane serine protease GlpG [Erwinia sp. Ejp617]
Length = 270
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
T V+ C ++++ + G + + P +Q++R+++ + H SLLH+LFN+
Sbjct: 95 LTLLVIAACVLVFILMQVLGDQTVMSLLSWPDET-QHYQLWRWFSHALLHFSLLHILFNL 153
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
+ LG LE+ +G+ ++F I ++ A
Sbjct: 154 MWFWYLGGALEKRLGAGKLFVIMLISA 180
>gi|296416368|ref|XP_002837852.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633736|emb|CAZ82043.1| unnamed protein product [Tuber melanosporum]
Length = 551
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 63 QVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVR 102
Q YRF T I H L+H+ FNML + LG+E+ER +G +R
Sbjct: 274 QWYRFITPIFLHAGLIHIAFNMLVQLKLGTEMERDIGHLR 313
>gi|311277646|ref|YP_003939877.1| rhomboid protease [Enterobacter cloacae SCF1]
gi|308746841|gb|ADO46593.1| Rhomboid protease [Enterobacter cloacae SCF1]
Length = 274
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 47/87 (54%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
FT +++ C ++++ + G + P F+++R+ T H SLLH+LFN+
Sbjct: 94 FTWCIMMACILVFIVMNIVGDRAVMGWLAWPYDPSLNFELWRYVTHAFMHFSLLHILFNL 153
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
L LG +E+ +GS ++ IT++ A
Sbjct: 154 LWWWYLGGAVEKRLGSGKLIVITVISA 180
>gi|120435155|ref|YP_860841.1| transmembrane rhomboid family protein [Gramella forsetii KT0803]
gi|117577305|emb|CAL65774.1| transmembrane rhomboid family protein [Gramella forsetii KT0803]
Length = 249
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T V+++ I+ I D YE L F+ ++ T + HG +H+LFNM
Sbjct: 7 TVKVLLIINVIFFIGSQLIGDVAYEYFALWFIKNPNFEFWQIITHMFMHGGFMHILFNMY 66
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLI 121
AL GS +E+++G R + A+LH L+
Sbjct: 67 ALWAFGSPIEQMLGQKRFVFFYFSAGIGAALLHTLV 102
>gi|115450317|ref|NP_001048759.1| Os03g0116400 [Oryza sativa Japonica Group]
gi|108705857|gb|ABF93652.1| membrane protein, putative, expressed [Oryza sativa Japonica Group]
gi|113547230|dbj|BAF10673.1| Os03g0116400 [Oryza sativa Japonica Group]
gi|125542142|gb|EAY88281.1| hypothetical protein OsI_09736 [Oryza sativa Indica Group]
gi|125584694|gb|EAZ25358.1| hypothetical protein OsJ_09173 [Oryza sativa Japonica Group]
gi|215692511|dbj|BAG87931.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 325
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 75/169 (44%), Gaps = 30/169 (17%)
Query: 56 SAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNA 115
V+ Q YR TSI H +LH++ NML+L+ +G LE+ G VR+ I +L +
Sbjct: 105 DKVVHEHQGYRLITSIWLHAGVLHLVANMLSLIFIGLRLEQQFGYVRIGAIYLLSGLGGS 164
Query: 116 ILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAK 175
+L L + + ++G SG +F L+ GA + + I
Sbjct: 165 VLSSLF--------------IRNHISVGASGALFGLL-------GAMLSELLTNWTIYTN 203
Query: 176 WYPLILLVLFQV-------LMTNVSLLGHLCGILSGFAYTYGFFNLLMP 217
++ +LF + ++ +V+ H+ G L+GF GF L+ P
Sbjct: 204 KVAAVITLLFVIAVNLALGILPHVNNFAHIGGFLTGF--LLGFVLLMRP 250
>gi|91227496|ref|ZP_01261833.1| GlpG protein [Vibrio alginolyticus 12G01]
gi|91188520|gb|EAS74812.1| GlpG protein [Vibrio alginolyticus 12G01]
Length = 280
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 53/88 (60%), Gaps = 2/88 (2%)
Query: 26 TSAVVIVCGTIYLICLLFGY-DSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
T ++ VC IYL+ + FG+ + +++ P+ ++QV+R+ + + H S+ H++FN+
Sbjct: 100 TLLIMTVCIIIYLLQM-FGFGNGVFKLLHFPAFEGQQWQVWRWLSHALLHFSVTHIVFNL 158
Query: 85 LALVPLGSELERIMGSVRMFYITILLAT 112
L LG ++ER +GS ++ + ++ A
Sbjct: 159 LWWWQLGGDIERRLGSGKLLQLFVVSAA 186
>gi|417897083|ref|ZP_12541026.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21235]
gi|341840349|gb|EGS81869.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21235]
Length = 372
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 85/191 (44%), Gaps = 28/191 (14%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSLLHV 80
T ++ V I+L C++ ++F ++ L + F V YR TS+ H S H+
Sbjct: 160 TYTIIFVNVLIWL-CMILYLNNFSDVKLLDVGGLVHFNVVHGEWYRIVTSMFLHFSFEHI 218
Query: 81 LFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDEC 140
L NML+L G +E I+GS RM + IA L + F L
Sbjct: 219 LMNMLSLFIFGKIVEAIIGSWRMLTVY------------FIAGLFGN--FVSLSFNTTTI 264
Query: 141 AIGFSGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGH 197
++G SG IF L I +S ++ + G I L++LV + M+N++++ H
Sbjct: 265 SVGASGAIFGLIGSIFAMMYVSKTFNKKMLGQLLI-----ALVILVGVSLFMSNINIVAH 319
Query: 198 LCGILSGFAYT 208
+ G + G T
Sbjct: 320 IGGFIGGLLIT 330
>gi|159124724|gb|EDP49842.1| rhomboid family protein, putative [Aspergillus fumigatus A1163]
Length = 272
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 93/232 (40%), Gaps = 16/232 (6%)
Query: 13 TRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIV 72
TR + +P FT V++V +L+ L + P+ I +YR T
Sbjct: 15 TRVRSYMLRLPLFTRIVLLVILAFWLLELQTIWSVVQWGSLTPNE-IGIGSMYRLNTYPF 73
Query: 73 FHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITI-LLATSNAILHLLIALLVAHIPFY 131
H H N+LAL PL E G++ + I L+T A +++L+ +
Sbjct: 74 IHVGFFHAFVNLLALTPLLERFEAEHGTLTAVALFIGPLSTFPAGIYILVEKFILR---- 129
Query: 132 RLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVF--GLFNIPAKWYPLILLVLFQVLM 189
+ +G S IF L+ E ++ +S F G IP PL L + +
Sbjct: 130 -----SNTAVVGASVWIFLLLGSE-AIKTFKSNPYFSLGTTKIPTWTSPLFACALVSIFV 183
Query: 190 TNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFI 241
N S LGHL I+ G+ G+ + +P IE L+ R P ++
Sbjct: 184 PNTSFLGHLSAIIIGYLLGLGYLKVFVPPEKILRWIEGK--LNLLGRLPHYV 233
>gi|414160916|ref|ZP_11417179.1| hypothetical protein HMPREF9310_01553 [Staphylococcus simulans
ACS-120-V-Sch1]
gi|410876595|gb|EKS24493.1| hypothetical protein HMPREF9310_01553 [Staphylococcus simulans
ACS-120-V-Sch1]
Length = 485
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 69/160 (43%), Gaps = 35/160 (21%)
Query: 63 QVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIA 122
++YR +S+ H + H+L NML+L G +E I G +M I + I+ L +
Sbjct: 200 EIYRLISSMFIHFNFEHILMNMLSLFIFGKLVEAIAGHWKMLGIYFISGIFGNIVSLALD 259
Query: 123 LLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYP---- 178
+ ++G SG IF LI S+F + + ++ P
Sbjct: 260 --------------TNSISVGASGAIFGLI-----------GSLFAIMYLSKQYTPKMLL 294
Query: 179 -----LILLVLFQVLMTNVSLLGHLCGILSGFAYTY-GFF 212
L LL +F + M NV++ HL G + G T+ G++
Sbjct: 295 QLVGVLALLTVFSLFMANVNIYAHLGGFIGGLLATFIGYY 334
>gi|297822631|ref|XP_002879198.1| hypothetical protein ARALYDRAFT_481823 [Arabidopsis lyrata subsp.
lyrata]
gi|297325037|gb|EFH55457.1| hypothetical protein ARALYDRAFT_481823 [Arabidopsis lyrata subsp.
lyrata]
Length = 387
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 80/175 (45%), Gaps = 30/175 (17%)
Query: 56 SAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNA 115
S V+ + +V+R +T I H + HVL NML+L+ +G LE+ G VR+ + ++ +
Sbjct: 119 SMVVHKHEVWRLFTCIWLHAGVFHVLANMLSLIFIGIRLEQEFGFVRIGLLYMISGFGGS 178
Query: 116 ILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAK 175
+L L F R ++G SG +F L+ GA + + I A
Sbjct: 179 LLSSL---------FNR-----AGISVGASGALFGLL-------GAMLSELLTNWTIYAN 217
Query: 176 WYPLILLVLFQV-------LMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYS 223
+ +L ++F + ++ +V HL G SGF GF L+ P +++
Sbjct: 218 KFAALLTLIFIIAINLAVGILPHVDNFAHLGGFTSGF--LLGFVFLIRPQYGYFN 270
>gi|70992609|ref|XP_751153.1| rhomboid family protein [Aspergillus fumigatus Af293]
gi|74670449|sp|Q4WLP9.1|RBD2_ASPFU RecName: Full=Rhomboid protein 2
gi|66848786|gb|EAL89115.1| rhomboid family protein, putative [Aspergillus fumigatus Af293]
Length = 272
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 93/232 (40%), Gaps = 16/232 (6%)
Query: 13 TRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIV 72
TR + +P FT V++V +L+ L + P+ I +YR T
Sbjct: 15 TRVRSYMLRLPLFTRLVLLVILAFWLLELQTIWSVVQWGSLTPNE-IGIGSMYRLNTYPF 73
Query: 73 FHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITI-LLATSNAILHLLIALLVAHIPFY 131
H H N+LAL PL E G++ + I L+T A +++L+ +
Sbjct: 74 IHVGFFHAFVNLLALTPLLERFEAEHGTLTAVALFIGPLSTFPAGIYILVEKFILR---- 129
Query: 132 RLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVF--GLFNIPAKWYPLILLVLFQVLM 189
+ +G S IF L+ E ++ +S F G IP PL L + +
Sbjct: 130 -----SNTAVVGASVWIFLLLGSE-AIKTFKSNPYFSLGTTKIPTWTSPLFACALVSIFV 183
Query: 190 TNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFI 241
N S LGHL I+ G+ G+ + +P IE L+ R P ++
Sbjct: 184 PNTSFLGHLSAIIIGYLLGLGYLKVFVPPEKILRWIEGK--LNLLGRLPHYV 233
>gi|374988154|ref|YP_004963649.1| hypothetical protein SBI_05398 [Streptomyces bingchenggensis BCW-1]
gi|297158806|gb|ADI08518.1| hypothetical protein SBI_05398 [Streptomyces bingchenggensis BCW-1]
Length = 295
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 68/155 (43%), Gaps = 19/155 (12%)
Query: 59 ISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILH 118
++ Q YR T++ H H+ FNML+L LG LE +G R + +L + L
Sbjct: 126 VAEGQWYRLVTAMFLHQQAYHIAFNMLSLWWLGGPLEAALGRARYLAVYLLAGLGGSALS 185
Query: 119 LLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYP 178
L+A ++ ++G SG IF L+ L R + + + A
Sbjct: 186 YLLA-------------AQNQPSLGASGAIFGLLGATAVL---MRRLNYDMRPVIAL--- 226
Query: 179 LILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFN 213
L+L ++F + ++ H+ G++ G A YG +
Sbjct: 227 LVLNLIFTFAWSGIAWQAHVGGLVVGTAVAYGMVH 261
>gi|292489920|ref|YP_003532810.1| glp regulon protein [Erwinia amylovora CFBP1430]
gi|292900955|ref|YP_003540324.1| membrane protein [Erwinia amylovora ATCC 49946]
gi|428786902|ref|ZP_19004378.1| Protein of glp regulon [Erwinia amylovora ACW56400]
gi|291200803|emb|CBJ47937.1| putative membrane protein [Erwinia amylovora ATCC 49946]
gi|291555357|emb|CBA23731.1| Protein of glp regulon [Erwinia amylovora CFBP1430]
gi|426274369|gb|EKV52111.1| Protein of glp regulon [Erwinia amylovora ACW56400]
Length = 270
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 29 VVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALV 88
V+ C ++++ + G + + P +Q++R+++ + H SLLH+LFN++
Sbjct: 99 VIAACVLVFILMQVLGDQTVMSLLSWPDET-QHYQLWRWFSHALLHFSLLHILFNLMWFW 157
Query: 89 PLGSELERIMGSVRMFYITILLA 111
LG LE+ +G+ ++F I ++ A
Sbjct: 158 YLGGALEKRLGAGKLFVIMLISA 180
>gi|255080834|ref|XP_002503990.1| predicted protein [Micromonas sp. RCC299]
gi|226519257|gb|ACO65248.1| predicted protein [Micromonas sp. RCC299]
Length = 183
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 88/191 (46%), Gaps = 21/191 (10%)
Query: 26 TSAVVIVCGTIY--LICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFN 83
TS V+ +C ++ L GY+ E+ + V+ + +R T+ H S LH+LFN
Sbjct: 3 TSLVIALCSGVWYFLNSKGLGYE---EVGVSYAKVVRDREYWRCLTASFSHISPLHLLFN 59
Query: 84 MLALVPLGSELERIMGS---------VRMFYITILLATSNAILHLLIALLVAHIPFYRLQ 134
M +L LG +E++ G VR + ++ + IL + + + H + R+
Sbjct: 60 MSSLWSLGV-VEQMRGRGEGWGSGWYVRYTLVMLVGTMALVILSYHVLVRMGHERYERVT 118
Query: 135 NVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSL 194
A+G+S V+F + + + S S+ G +P P L+ V++ S
Sbjct: 119 ------AVGYSCVVFGWMTVLSVRQPTSSLSLLGYIQLPVNLAPFGSLIFTSVVVPQASF 172
Query: 195 LGHLCGILSGF 205
+GHL GI+ G+
Sbjct: 173 VGHLAGIVVGY 183
>gi|146313465|ref|YP_001178539.1| intramembrane serine protease GlpG [Enterobacter sp. 638]
gi|172046003|sp|A4WFK8.1|GLPG_ENT38 RecName: Full=Rhomboid protease GlpG; AltName: Full=Intramembrane
serine protease
gi|145320341|gb|ABP62488.1| Rhomboid family protein [Enterobacter sp. 638]
Length = 276
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 47/87 (54%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
FT ++ C +++I + G P ++ V+R++T + H S+LH+LFN+
Sbjct: 96 FTLLLMAACILVFIIMNVVGDQRVMIALAWPYGPAVQYDVWRYFTHALMHFSVLHILFNL 155
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
L LG +E+ +GS ++ ITI+ A
Sbjct: 156 LWWWYLGGAVEKRLGSGKLIVITIISA 182
>gi|308387765|pdb|2XOW|A Chain A, Structure Of Glpg In Complex With A Mechanism-Based
Isocoumarin Inhibitor
gi|359546095|pdb|3TXT|A Chain A, Crystal Structure Of Glpg In Complex With Inhibitor Dfp
gi|449802183|pdb|3ZEB|A Chain A, A Complex Of Glpg With Isocoumarin Inhibitor Covalently
Bonded To Serine 201 And Histidine 150
Length = 179
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T ++I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 6 TWVMMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLL 65
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ ALL ++ Q G S
Sbjct: 66 WWWYLGGAVEKRLGSGKLIVIT-----------LISALLSGYVQ----QKFSGPWFGGLS 110
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 111 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFD-----LFGMSMANGA--- 162
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 163 HIAGLAVGLAMAF 175
>gi|449480070|ref|XP_004177070.1| PREDICTED: rhomboid domain-containing protein 2 [Taeniopygia
guttata]
Length = 312
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 77/158 (48%), Gaps = 9/158 (5%)
Query: 54 LPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATS 113
L A + +V+R T I + L+ + + + ER +G+V+ +T +
Sbjct: 58 LRPAALHDGEVHRLITYIFIYEDLISLACGTVIIWYFAGSFERNVGTVKHCILTATFSVL 117
Query: 114 NAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIP 173
+A+L+L + LV+ RL V D A GF V F+++ + T+ S + +FG +P
Sbjct: 118 SALLYLSLQPLVS-----RLLEVGD--AKGFMPVAFAMLGVSTTRSRMKRTLLFGC-RVP 169
Query: 174 AKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGF 211
P + L + + SLLG+LCG+L G AY G+
Sbjct: 170 VVLVPWLGLCP-AWFVPHSSLLGNLCGLLVGEAYGLGY 206
>gi|418476663|ref|ZP_13045815.1| hypothetical protein SMCF_8893 [Streptomyces coelicoflavus ZG0656]
gi|371542672|gb|EHN71698.1| hypothetical protein SMCF_8893 [Streptomyces coelicoflavus ZG0656]
Length = 297
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 27/163 (16%)
Query: 55 PSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSN 114
P ++ Q YR T++ H +H+LFNML+L LG LE +G R + +
Sbjct: 125 PVEGVAEGQWYRLLTAMFLHTGYMHILFNMLSLWWLGGPLEGALGRARYLALYFCSGLAG 184
Query: 115 AILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPA 174
+ L LIA ++ ++G SG IF L +L + + A
Sbjct: 185 SALTYLIA-------------EPNQPSLGASGAIFGLFGATATL----------VRRLNA 221
Query: 175 KWYPLILLVLFQVLMT----NVSLLGHLCGILSGFAYTYGFFN 213
P+++L+ ++ T N++ H+ G+++G Y +
Sbjct: 222 DMRPVVILLAINLVFTFTWANIAWQAHVGGLVAGAVIGYAMLH 264
>gi|312174104|emb|CBX82357.1| Protein of glp regulon [Erwinia amylovora ATCC BAA-2158]
Length = 270
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 29 VVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALV 88
V+ C ++++ + G + + P +Q++R+++ + H SLLH+LFN++
Sbjct: 99 VIAACVLVFILMQVLGDQTVMSLLSWPDET-QHYQLWRWFSHALLHFSLLHILFNLMWFW 157
Query: 89 PLGSELERIMGSVRMFYITILLA 111
LG LE+ +G+ ++F I ++ A
Sbjct: 158 YLGGALEKRLGAGKLFVIMLISA 180
>gi|398343101|ref|ZP_10527804.1| hypothetical protein LinasL1_08561 [Leptospira inadai serovar Lyme
str. 10]
Length = 279
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 72/164 (43%), Gaps = 16/164 (9%)
Query: 54 LPSAVISRFQVYRFYTSIVFH--GSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLA 111
+P V+ +F ++ T H S+ H+LFNML+L GS LE GS ++
Sbjct: 51 VPDFVLHKFFAWQVLTYAFLHDPNSIFHILFNMLSLWMFGSTLEAYWGSKNFLKFYLVSC 110
Query: 112 TSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFN 171
IL L LL +G SG ++ L++ + + F +F
Sbjct: 111 IGGGILPLFAHLL----------GFPQGTIVGASGGLYGLLIAFALIWPNRELYYFAIFP 160
Query: 172 IPAKWYPLILLVL--FQVLMTNVSLLGHLCGILSGFAYTYGFFN 213
I AK++ LILL+L F + V++ H G L F Y F+N
Sbjct: 161 IKAKYFVLILLLLIGFTSSSSGVAVTAHAGGAL--FGALYFFYN 202
>gi|348676094|gb|EGZ15912.1| hypothetical protein PHYSODRAFT_334115 [Phytophthora sojae]
Length = 275
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 76/156 (48%), Gaps = 13/156 (8%)
Query: 55 PSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSN 114
P V++ ++ + S H LH+ ++L+ + G +LE +GS+ + + L
Sbjct: 79 PGKVVANKEIAAVFISPFIHWEDLHLYQSILSFLWKGYKLEGRLGSIGFCVLLVYLIV-- 136
Query: 115 AILHLLIALLV--AHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNI 172
L AL+V AH+ + M EC GFSGV+ ++ VI S A ++ F +
Sbjct: 137 ----LTQALIVAGAHVISW---GAMQECITGFSGVLTAIKVILNVNSPAFTK--LYSFKV 187
Query: 173 PAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYT 208
P K+ + LV+ +L+ + +L G+++G+ Y
Sbjct: 188 PTKYAAWLELVITYLLVPKLPILAQAAGLIAGYVYV 223
>gi|166007307|pdb|3B45|A Chain A, Crystal Structure Of Glpg At 1.9a Resolution
Length = 180
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T ++I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 7 TWVMMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLL 66
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ ALL ++ Q G S
Sbjct: 67 WWWYLGGAVEKRLGSGKLIVIT-----------LISALLSGYVQ----QKFSGPWFGGLS 111
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 112 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFD-----LFGMSMANGA--- 163
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 164 HIAGLAVGLAMAF 176
>gi|149016259|gb|EDL75505.1| hypothetical LOC316557, isoform CRA_b [Rattus norvegicus]
gi|149016261|gb|EDL75507.1| hypothetical LOC316557, isoform CRA_b [Rattus norvegicus]
Length = 168
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 51/126 (40%), Gaps = 15/126 (11%)
Query: 140 CAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLC 199
CA+GFSGV+F+L V+ ++ G F +P ++ L S GHL
Sbjct: 10 CAVGFSGVLFALKVLSNHYCPGGFVNILG-FPVPNRFACWAELAAIHFCTPGTSFAGHLA 68
Query: 200 GILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFILCTGGNPSGYIPTYSGQN 259
GIL G YT G +M + S ++ T G P Y TY +
Sbjct: 69 GILVGLMYTQGPLKKIMDACAGPSGYQNRY--------------TDGRPVNYEATYRNYD 114
Query: 260 TSSSGL 265
++GL
Sbjct: 115 IYTAGL 120
>gi|153824311|ref|ZP_01976978.1| glpG protein [Vibrio cholerae B33]
gi|126518166|gb|EAZ75391.1| glpG protein [Vibrio cholerae B33]
Length = 235
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 47/87 (54%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
FT ++ +C I+ + D + P+ ++Q++R+ + + H S++H+ FN+
Sbjct: 99 FTLFIMALCIIIFTLQTFGAGDEVFNALHFPALAGQQWQIWRWVSHALLHFSVMHIAFNL 158
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
L G +LE+ +GSVR+ + ++ A
Sbjct: 159 LWWWQFGGDLEQRLGSVRLIKLFVVSA 185
>gi|444321935|ref|XP_004181623.1| hypothetical protein TBLA_0G01600 [Tetrapisispora blattae CBS 6284]
gi|387514668|emb|CCH62104.1| hypothetical protein TBLA_0G01600 [Tetrapisispora blattae CBS 6284]
Length = 262
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 83/180 (46%), Gaps = 12/180 (6%)
Query: 30 VIVCGTIYLICLLFGYDSFYEI----CFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
V+ G + LLFG + Y I P ++ + F + R + + H S+ H++FN+L
Sbjct: 16 VLSVGLAIFLLLLFGINQMYPINQKLSMQPESLFT-FDIGRLSSYPLGHMSITHIIFNIL 74
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
AL+PL + E G++ Y +LL S + ++ VA Y +V+ GF+
Sbjct: 75 ALIPLLNIFETTHGTL---YTGVLLNISAVVCGVMYC--VAGRFLYPEVSVLGASGWGFT 129
Query: 146 GVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGF 205
F+ ++ + + R ++ P P++ L L + + S GHL G++ G+
Sbjct: 130 --FFAYFAVKEASVRPRQRLFGTQYSFPTLIGPIVTLALIAIFVPGSSFWGHLFGMIFGY 187
>gi|334135017|ref|ZP_08508518.1| peptidase, S54 family [Paenibacillus sp. HGF7]
gi|333607519|gb|EGL18832.1| peptidase, S54 family [Paenibacillus sp. HGF7]
Length = 204
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 70/144 (48%), Gaps = 20/144 (13%)
Query: 65 YRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALL 124
+RF+T++ H L H+LFN ALV LER++GSVR A+ +L L
Sbjct: 62 WRFFTAMFLHIGLSHLLFNSFALVIFAPPLERLLGSVR-----------YAVFYLASGAL 110
Query: 125 VAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLV- 183
+ ++ + A G SG I+ + L+ + + L + ++ +I+LV
Sbjct: 111 GSAFSYWLHTDAY--VAAGASGAIYGIYAAYLYLALFRRQ----LLDQQSRQTVIIILVS 164
Query: 184 --LFQVLMTNVSLLGHLCGILSGF 205
LF V++ NV L HL G L+GF
Sbjct: 165 GLLFSVIVPNVDLYTHLGGFLAGF 188
>gi|15640131|ref|NP_229758.1| glpG protein [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121591577|ref|ZP_01678833.1| glpG protein [Vibrio cholerae 2740-80]
gi|121727768|ref|ZP_01680844.1| glpG protein [Vibrio cholerae V52]
gi|147675060|ref|YP_001218317.1| glpG protein [Vibrio cholerae O395]
gi|153818200|ref|ZP_01970867.1| glpG protein [Vibrio cholerae NCTC 8457]
gi|227080335|ref|YP_002808886.1| glpG protein [Vibrio cholerae M66-2]
gi|227116449|ref|YP_002818345.1| glpG protein [Vibrio cholerae O395]
gi|229508382|ref|ZP_04397886.1| protein GlpG [Vibrio cholerae BX 330286]
gi|229508937|ref|ZP_04398427.1| protein GlpG [Vibrio cholerae B33]
gi|229515862|ref|ZP_04405320.1| protein GlpG [Vibrio cholerae TMA 21]
gi|229517051|ref|ZP_04406497.1| protein GlpG [Vibrio cholerae RC9]
gi|229606656|ref|YP_002877304.1| protein GlpG [Vibrio cholerae MJ-1236]
gi|254851484|ref|ZP_05240834.1| rhomboid protease glpG glpG protein [Vibrio cholerae MO10]
gi|255743942|ref|ZP_05417897.1| protein GlpG [Vibrio cholera CIRS 101]
gi|262151317|ref|ZP_06028451.1| protein GlpG [Vibrio cholerae INDRE 91/1]
gi|262167236|ref|ZP_06034947.1| protein GlpG [Vibrio cholerae RC27]
gi|298501126|ref|ZP_07010926.1| glpG protein [Vibrio cholerae MAK 757]
gi|360036678|ref|YP_004938441.1| GlpG protein [Vibrio cholerae O1 str. 2010EL-1786]
gi|379740001|ref|YP_005331970.1| GlpG protein [Vibrio cholerae IEC224]
gi|417811181|ref|ZP_12457848.1| rhomboid protease glpG [Vibrio cholerae HC-49A2]
gi|417814935|ref|ZP_12461577.1| rhomboid protease glpG [Vibrio cholerae HCUF01]
gi|418330812|ref|ZP_12941774.1| rhomboid protease glpG [Vibrio cholerae HC-06A1]
gi|418335778|ref|ZP_12944682.1| rhomboid protease glpG [Vibrio cholerae HC-23A1]
gi|418342346|ref|ZP_12949162.1| rhomboid protease glpG [Vibrio cholerae HC-28A1]
gi|418347521|ref|ZP_12952262.1| rhomboid protease glpG [Vibrio cholerae HC-43A1]
gi|418353041|ref|ZP_12955769.1| rhomboid protease glpG [Vibrio cholerae HC-61A1]
gi|419824573|ref|ZP_14348085.1| rhomboid family protein [Vibrio cholerae CP1033(6)]
gi|421315400|ref|ZP_15765975.1| rhomboid protease glpG [Vibrio cholerae CP1032(5)]
gi|421318900|ref|ZP_15769463.1| rhomboid protease glpG [Vibrio cholerae CP1038(11)]
gi|421322954|ref|ZP_15773488.1| rhomboid protease glpG [Vibrio cholerae CP1041(14)]
gi|421326405|ref|ZP_15776925.1| rhomboid protease glpG [Vibrio cholerae CP1042(15)]
gi|421330331|ref|ZP_15780818.1| rhomboid protease glpG [Vibrio cholerae CP1046(19)]
gi|421337498|ref|ZP_15787957.1| rhomboid protease glpG [Vibrio cholerae CP1048(21)]
gi|421337837|ref|ZP_15788280.1| rhomboid protease glpG [Vibrio cholerae HC-20A2]
gi|421348804|ref|ZP_15799179.1| rhomboid protease glpG [Vibrio cholerae HC-46A1]
gi|422890132|ref|ZP_16932581.1| rhomboid protease glpG [Vibrio cholerae HC-40A1]
gi|422900918|ref|ZP_16936331.1| rhomboid protease glpG [Vibrio cholerae HC-48A1]
gi|422905101|ref|ZP_16939978.1| rhomboid protease glpG [Vibrio cholerae HC-70A1]
gi|422911848|ref|ZP_16946388.1| rhomboid protease glpG [Vibrio cholerae HFU-02]
gi|422924314|ref|ZP_16957375.1| rhomboid protease glpG [Vibrio cholerae HC-38A1]
gi|423143377|ref|ZP_17131006.1| rhomboid protease glpG [Vibrio cholerae HC-19A1]
gi|423148358|ref|ZP_17135730.1| rhomboid protease glpG [Vibrio cholerae HC-21A1]
gi|423152145|ref|ZP_17139370.1| rhomboid protease glpG [Vibrio cholerae HC-22A1]
gi|423154937|ref|ZP_17142083.1| rhomboid protease glpG [Vibrio cholerae HC-32A1]
gi|423158802|ref|ZP_17145783.1| rhomboid protease glpG [Vibrio cholerae HC-33A2]
gi|423163464|ref|ZP_17150275.1| rhomboid protease glpG [Vibrio cholerae HC-48B2]
gi|423729475|ref|ZP_17702813.1| rhomboid family protein [Vibrio cholerae HC-17A1]
gi|423745255|ref|ZP_17710991.1| rhomboid family protein [Vibrio cholerae HC-50A2]
gi|423889531|ref|ZP_17725031.1| rhomboid family protein [Vibrio cholerae HC-62A1]
gi|423922943|ref|ZP_17729642.1| rhomboid family protein [Vibrio cholerae HC-77A1]
gi|424000648|ref|ZP_17743752.1| rhomboid protease glpG [Vibrio cholerae HC-17A2]
gi|424004812|ref|ZP_17747811.1| rhomboid protease glpG [Vibrio cholerae HC-37A1]
gi|424022609|ref|ZP_17762286.1| rhomboid protease glpG [Vibrio cholerae HC-62B1]
gi|424025628|ref|ZP_17765259.1| rhomboid protease glpG [Vibrio cholerae HC-69A1]
gi|424585000|ref|ZP_18024608.1| rhomboid protease glpG [Vibrio cholerae CP1030(3)]
gi|424593626|ref|ZP_18032981.1| rhomboid protease glpG [Vibrio cholerae CP1040(13)]
gi|424597556|ref|ZP_18036769.1| rhomboid protease glpG [Vibrio Cholerae CP1044(17)]
gi|424600331|ref|ZP_18039501.1| rhomboid protease glpG [Vibrio cholerae CP1047(20)]
gi|424605233|ref|ZP_18044213.1| rhomboid protease glpG [Vibrio cholerae CP1050(23)]
gi|424608956|ref|ZP_18047829.1| rhomboid protease glpG [Vibrio cholerae HC-39A1]
gi|424611866|ref|ZP_18050688.1| rhomboid protease glpG [Vibrio cholerae HC-41A1]
gi|424615753|ref|ZP_18054459.1| rhomboid protease glpG [Vibrio cholerae HC-42A1]
gi|424620508|ref|ZP_18059048.1| rhomboid protease glpG [Vibrio cholerae HC-47A1]
gi|424643322|ref|ZP_18081092.1| rhomboid protease glpG [Vibrio cholerae HC-56A2]
gi|424651253|ref|ZP_18088790.1| rhomboid protease glpG [Vibrio cholerae HC-57A2]
gi|424655206|ref|ZP_18092519.1| rhomboid protease glpG [Vibrio cholerae HC-81A2]
gi|440711978|ref|ZP_20892605.1| protein GlpG [Vibrio cholerae 4260B]
gi|443502158|ref|ZP_21069162.1| rhomboid protease glpG [Vibrio cholerae HC-64A1]
gi|443506058|ref|ZP_21072869.1| rhomboid protease glpG [Vibrio cholerae HC-65A1]
gi|443509894|ref|ZP_21076580.1| rhomboid protease glpG [Vibrio cholerae HC-67A1]
gi|443513736|ref|ZP_21080293.1| rhomboid protease glpG [Vibrio cholerae HC-68A1]
gi|443517541|ref|ZP_21083980.1| rhomboid protease glpG [Vibrio cholerae HC-71A1]
gi|443522129|ref|ZP_21088391.1| rhomboid protease glpG [Vibrio cholerae HC-72A2]
gi|443529062|ref|ZP_21095084.1| rhomboid protease glpG [Vibrio cholerae HC-7A1]
gi|443533800|ref|ZP_21099736.1| rhomboid protease glpG [Vibrio cholerae HC-80A1]
gi|443536622|ref|ZP_21102482.1| rhomboid protease glpG [Vibrio cholerae HC-81A1]
gi|449054772|ref|ZP_21733440.1| GlpG protein (membrane protein of glp regulon) [Vibrio cholerae O1
str. Inaba G4222]
gi|9654498|gb|AAF93277.1| glpG protein [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121546570|gb|EAX56769.1| glpG protein [Vibrio cholerae 2740-80]
gi|121629892|gb|EAX62304.1| glpG protein [Vibrio cholerae V52]
gi|126511229|gb|EAZ73823.1| glpG protein [Vibrio cholerae NCTC 8457]
gi|146316943|gb|ABQ21482.1| glpG protein [Vibrio cholerae O395]
gi|227008223|gb|ACP04435.1| glpG protein [Vibrio cholerae M66-2]
gi|227011899|gb|ACP08109.1| glpG protein [Vibrio cholerae O395]
gi|229346114|gb|EEO11086.1| protein GlpG [Vibrio cholerae RC9]
gi|229347125|gb|EEO12086.1| protein GlpG [Vibrio cholerae TMA 21]
gi|229354054|gb|EEO18987.1| protein GlpG [Vibrio cholerae B33]
gi|229354655|gb|EEO19577.1| protein GlpG [Vibrio cholerae BX 330286]
gi|229369311|gb|ACQ59734.1| protein GlpG [Vibrio cholerae MJ-1236]
gi|254847189|gb|EET25603.1| rhomboid protease glpG glpG protein [Vibrio cholerae MO10]
gi|255738425|gb|EET93815.1| protein GlpG [Vibrio cholera CIRS 101]
gi|262024300|gb|EEY42990.1| protein GlpG [Vibrio cholerae RC27]
gi|262030856|gb|EEY49486.1| protein GlpG [Vibrio cholerae INDRE 91/1]
gi|297540160|gb|EFH76221.1| glpG protein [Vibrio cholerae MAK 757]
gi|340045780|gb|EGR06719.1| rhomboid protease glpG [Vibrio cholerae HCUF01]
gi|340046106|gb|EGR07040.1| rhomboid protease glpG [Vibrio cholerae HC-49A2]
gi|341626825|gb|EGS52181.1| rhomboid protease glpG [Vibrio cholerae HC-70A1]
gi|341628361|gb|EGS53619.1| rhomboid protease glpG [Vibrio cholerae HC-48A1]
gi|341628706|gb|EGS53924.1| rhomboid protease glpG [Vibrio cholerae HC-40A1]
gi|341641968|gb|EGS66479.1| rhomboid protease glpG [Vibrio cholerae HFU-02]
gi|341649237|gb|EGS73231.1| rhomboid protease glpG [Vibrio cholerae HC-38A1]
gi|356422911|gb|EHH76374.1| rhomboid protease glpG [Vibrio cholerae HC-06A1]
gi|356423637|gb|EHH77078.1| rhomboid protease glpG [Vibrio cholerae HC-21A1]
gi|356427786|gb|EHH81026.1| rhomboid protease glpG [Vibrio cholerae HC-19A1]
gi|356434598|gb|EHH87775.1| rhomboid protease glpG [Vibrio cholerae HC-23A1]
gi|356435973|gb|EHH89108.1| rhomboid protease glpG [Vibrio cholerae HC-22A1]
gi|356438858|gb|EHH91860.1| rhomboid protease glpG [Vibrio cholerae HC-28A1]
gi|356445552|gb|EHH98355.1| rhomboid protease glpG [Vibrio cholerae HC-32A1]
gi|356448606|gb|EHI01369.1| rhomboid protease glpG [Vibrio cholerae HC-43A1]
gi|356451262|gb|EHI03957.1| rhomboid protease glpG [Vibrio cholerae HC-33A2]
gi|356455554|gb|EHI08195.1| rhomboid protease glpG [Vibrio cholerae HC-61A1]
gi|356456837|gb|EHI09418.1| rhomboid protease glpG [Vibrio cholerae HC-48B2]
gi|356647832|gb|AET27887.1| GlpG protein [Vibrio cholerae O1 str. 2010EL-1786]
gi|378793511|gb|AFC56982.1| GlpG protein [Vibrio cholerae IEC224]
gi|395924145|gb|EJH34954.1| rhomboid protease glpG [Vibrio cholerae CP1032(5)]
gi|395925303|gb|EJH36103.1| rhomboid protease glpG [Vibrio cholerae CP1041(14)]
gi|395926442|gb|EJH37225.1| rhomboid protease glpG [Vibrio cholerae CP1038(11)]
gi|395929121|gb|EJH39872.1| rhomboid protease glpG [Vibrio cholerae CP1048(21)]
gi|395935939|gb|EJH46673.1| rhomboid protease glpG [Vibrio cholerae CP1042(15)]
gi|395936329|gb|EJH47054.1| rhomboid protease glpG [Vibrio cholerae CP1046(19)]
gi|395939215|gb|EJH49898.1| rhomboid protease glpG [Vibrio cholerae HC-46A1]
gi|395948102|gb|EJH58756.1| rhomboid protease glpG [Vibrio cholerae HC-20A2]
gi|395964984|gb|EJH75171.1| rhomboid protease glpG [Vibrio cholerae HC-56A2]
gi|395965184|gb|EJH75363.1| rhomboid protease glpG [Vibrio cholerae HC-57A2]
gi|395967815|gb|EJH77855.1| rhomboid protease glpG [Vibrio cholerae HC-42A1]
gi|395977004|gb|EJH86434.1| rhomboid protease glpG [Vibrio cholerae HC-47A1]
gi|395979647|gb|EJH88985.1| rhomboid protease glpG [Vibrio cholerae CP1030(3)]
gi|395980111|gb|EJH89411.1| rhomboid protease glpG [Vibrio cholerae CP1047(20)]
gi|408011326|gb|EKG49147.1| rhomboid protease glpG [Vibrio cholerae HC-39A1]
gi|408018268|gb|EKG55723.1| rhomboid protease glpG [Vibrio cholerae HC-41A1]
gi|408038696|gb|EKG75024.1| rhomboid protease glpG [Vibrio cholerae CP1040(13)]
gi|408045819|gb|EKG81587.1| rhomboid protease glpG [Vibrio Cholerae CP1044(17)]
gi|408047690|gb|EKG83256.1| rhomboid protease glpG [Vibrio cholerae CP1050(23)]
gi|408058239|gb|EKG93053.1| rhomboid protease glpG [Vibrio cholerae HC-81A2]
gi|408612548|gb|EKK85883.1| rhomboid family protein [Vibrio cholerae CP1033(6)]
gi|408628541|gb|EKL01277.1| rhomboid family protein [Vibrio cholerae HC-17A1]
gi|408645039|gb|EKL16706.1| rhomboid family protein [Vibrio cholerae HC-50A2]
gi|408660367|gb|EKL31385.1| rhomboid family protein [Vibrio cholerae HC-77A1]
gi|408661190|gb|EKL32182.1| rhomboid family protein [Vibrio cholerae HC-62A1]
gi|408850161|gb|EKL90137.1| rhomboid protease glpG [Vibrio cholerae HC-37A1]
gi|408850491|gb|EKL90446.1| rhomboid protease glpG [Vibrio cholerae HC-17A2]
gi|408876374|gb|EKM15502.1| rhomboid protease glpG [Vibrio cholerae HC-62B1]
gi|408882362|gb|EKM21195.1| rhomboid protease glpG [Vibrio cholerae HC-69A1]
gi|439972401|gb|ELP48687.1| protein GlpG [Vibrio cholerae 4260B]
gi|443433461|gb|ELS75967.1| rhomboid protease glpG [Vibrio cholerae HC-64A1]
gi|443437300|gb|ELS83396.1| rhomboid protease glpG [Vibrio cholerae HC-65A1]
gi|443441133|gb|ELS90800.1| rhomboid protease glpG [Vibrio cholerae HC-67A1]
gi|443444945|gb|ELS98201.1| rhomboid protease glpG [Vibrio cholerae HC-68A1]
gi|443448807|gb|ELT05420.1| rhomboid protease glpG [Vibrio cholerae HC-71A1]
gi|443451843|gb|ELT12085.1| rhomboid protease glpG [Vibrio cholerae HC-72A2]
gi|443460148|gb|ELT27537.1| rhomboid protease glpG [Vibrio cholerae HC-7A1]
gi|443463022|gb|ELT34037.1| rhomboid protease glpG [Vibrio cholerae HC-80A1]
gi|443467869|gb|ELT42523.1| rhomboid protease glpG [Vibrio cholerae HC-81A1]
gi|448265918|gb|EMB03151.1| GlpG protein (membrane protein of glp regulon) [Vibrio cholerae O1
str. Inaba G4222]
Length = 277
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 47/87 (54%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
FT ++ +C I+ + D + P+ ++Q++R+ + + H S++H+ FN+
Sbjct: 99 FTLFIMALCIIIFTLQTFGAGDEVFNALHFPALAGQQWQIWRWVSHALLHFSVMHIAFNL 158
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
L G +LE+ +GSVR+ + ++ A
Sbjct: 159 LWWWQFGGDLEQRLGSVRLIKLFVVSA 185
>gi|259910066|ref|YP_002650422.1| intramembrane serine protease GlpG [Erwinia pyrifoliae Ep1/96]
gi|387873067|ref|YP_005804454.1| protein of glp regulon [Erwinia pyrifoliae DSM 12163]
gi|224965688|emb|CAX57220.1| Protein of glp regulon [Erwinia pyrifoliae Ep1/96]
gi|283480167|emb|CAY76083.1| Protein of glp regulon [Erwinia pyrifoliae DSM 12163]
Length = 270
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T V+ C ++++ + G + + P +Q++R+++ + H SLLH+LFN++
Sbjct: 96 TLLVIAACVLVFILMQVLGDQTVMSLLSWPDET-QHYQLWRWFSHALLHFSLLHILFNLM 154
Query: 86 ALVPLGSELERIMGSVRMFYITILLA 111
LG LE+ +G+ ++F I ++ A
Sbjct: 155 WFWYLGGALEKRLGAGKLFVIMLISA 180
>gi|122921469|pdb|2O7L|A Chain A, The Open-Cap Conformation Of Glpg
Length = 180
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T ++I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 5 TWVMMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLL 64
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ ALL ++ Q G S
Sbjct: 65 WWWYLGGAVEKRLGSGKLIVIT-----------LISALLSGYVQ----QKFSGPWFGGLS 109
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 110 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFD-----LFGMSMANGA--- 161
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 162 HIAGLAVGLAMAF 174
>gi|50288809|ref|XP_446834.1| hypothetical protein [Candida glabrata CBS 138]
gi|74609932|sp|Q6FSG0.1|RBD2_CANGA RecName: Full=Rhomboid protein 2
gi|49526143|emb|CAG59765.1| unnamed protein product [Candida glabrata]
Length = 266
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 25/213 (11%)
Query: 31 IVCGTIYLICLLFGYDSFYE-----ICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
+ G + + LFG YE P+++ + + + H S LH++FN L
Sbjct: 18 LTTGLLIFLTFLFGISQLYEDFKNHFVLTPNSLFD-IDLGKLSLYPLMHLSYLHLVFNAL 76
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
A+V + E G++ + L A I++ +++ L++ ++ G S
Sbjct: 77 AIVGPLNNFESSHGTIHTGVVLNLSAVIAGIIYCVVSRLLS----------LETGVAGAS 126
Query: 146 GVIFSLI----VIETSLSG--AQSRSVFGLF-NIPAKWYPLILLVLFQVLMTNVSLLGHL 198
G +F+ I V E+ L SR + G+ +IP ++ P++ L+ ++ S LGH
Sbjct: 127 GWVFTFITYLCVKESQLYPRLELSRFIPGVTQSIPTQFTPVVFLLFTAIVFFQSSFLGHT 186
Query: 199 CGILSGFAYTYG--FFNLLMPGTSFYSAIESSS 229
G++ G+ YG +FN+L+P IE +
Sbjct: 187 AGMIVGYIMGYGETWFNILIPPAWIIEKIEEKA 219
>gi|417534502|ref|ZP_12188253.1| GlpG protein [Salmonella enterica subsp. enterica serovar Urbana
str. R8-2977]
gi|353658629|gb|EHC98755.1| GlpG protein [Salmonella enterica subsp. enterica serovar Urbana
str. R8-2977]
Length = 285
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 73/164 (44%), Gaps = 32/164 (19%)
Query: 55 PSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSN 114
P + +F+ +R++T I H SL+H+LFN+L LG +E+ +GS ++ IT++ A +
Sbjct: 135 PFDPVLKFEFWRYFTHIFMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITVISALLS 194
Query: 115 AILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVI---------ETSLSGAQSRS 165
Y Q G SGV+++L+ ++ + +
Sbjct: 195 G---------------YVQQKFSGPWFGGLSGVVYALMGYVWLRGERDPQSGIYLQRGLI 239
Query: 166 VFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTY 209
+F L I A W+ F + M N + H+ G++ G A +
Sbjct: 240 IFALLWIVAGWFD-----WFGMSMANGA---HIAGLIVGLAMAF 275
>gi|320162418|ref|YP_004175643.1| rhomboid family protein [Anaerolinea thermophila UNI-1]
gi|319996272|dbj|BAJ65043.1| rhomboid family protein [Anaerolinea thermophila UNI-1]
Length = 258
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 79/188 (42%), Gaps = 22/188 (11%)
Query: 23 PFFTSAVVIVCGTIYLICLL----FGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLL 78
P T ++ V +YL+ +L FGYD + + +I + + +R T + H SL
Sbjct: 36 PLVTYILLGVTVGVYLLQMLSRPLFGYDLLLAMGAKSNTLIQQGEFWRLITPMFLHVSLP 95
Query: 79 HVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMD 138
H+ FNM AL G LER G R + + +L L++
Sbjct: 96 HIAFNMYALYAFGVSLERHYGRRRFLLLYFIGGLGGVVLSYLLS---------------P 140
Query: 139 ECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQV--LMTNVSLLG 196
E + G S +F ++ E +R FG + A W + ++ + V L + G
Sbjct: 141 ENSAGASTALFGVVAAEAVFL-YYNRRWFGKEAVSALWNTVFIIGINLVLGLSPGIDNWG 199
Query: 197 HLCGILSG 204
HL G+++G
Sbjct: 200 HLGGLIAG 207
>gi|295097029|emb|CBK86119.1| Uncharacterized membrane protein (homolog of Drosophila rhomboid)
[Enterobacter cloacae subsp. cloacae NCTC 9394]
Length = 276
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 48/87 (55%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
FT ++ C +++I + G S P +F V+R++T + H S++H+LFN+
Sbjct: 96 FTLLLMAACIIVFIIMSVVGDQSVMIALAWPYDPSLQFDVWRYFTHALMHFSVMHILFNL 155
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
L LG +E+ +GS ++ IT++ A
Sbjct: 156 LWWWYLGGAVEKRLGSGKLIVITLISA 182
>gi|42569431|ref|NP_180469.3| protein RHOMBOID-like 1 [Arabidopsis thaliana]
gi|110737035|dbj|BAF00472.1| hypothetical protein [Arabidopsis thaliana]
gi|330253108|gb|AEC08202.1| protein RHOMBOID-like 1 [Arabidopsis thaliana]
Length = 389
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 80/175 (45%), Gaps = 30/175 (17%)
Query: 56 SAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNA 115
S V+ + +V+R +T I H + HVL NML+L+ +G LE+ G VR+ + ++ +
Sbjct: 121 SMVVHKHEVWRLFTCIWLHAGVFHVLANMLSLIFIGIRLEQEFGFVRIGLLYMISGFGGS 180
Query: 116 ILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAK 175
+L L F R ++G SG +F L+ GA + + I A
Sbjct: 181 LLSSL---------FNR-----AGISVGASGALFGLL-------GAMLSELLTNWTIYAN 219
Query: 176 WYPLILLVLFQV-------LMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYS 223
+ +L ++F + ++ +V HL G SGF GF L+ P +++
Sbjct: 220 KFAALLTLIFIIAINLAVGILPHVDNFAHLGGFTSGF--LLGFVFLIRPQYGYFN 272
>gi|312086618|ref|XP_003145148.1| hypothetical protein LOAG_09573 [Loa loa]
Length = 146
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%)
Query: 51 ICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILL 110
+C LPS ++ R + R S V H +H+ FNM++L+ G LE +GS R +
Sbjct: 1 MCLLPSRILYRSEWLRMLASTVMHVDDMHLYFNMISLLWKGRRLEPWLGSRRFLLLLATF 60
Query: 111 ATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
A + + + ++ L + + M++CA+GFS
Sbjct: 61 ALATSSTMVGLSYLADEVFTFNGGGYMNQCAVGFS 95
>gi|269968650|ref|ZP_06182647.1| glpG protein [Vibrio alginolyticus 40B]
gi|269826737|gb|EEZ81074.1| glpG protein [Vibrio alginolyticus 40B]
Length = 269
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 53/88 (60%), Gaps = 2/88 (2%)
Query: 26 TSAVVIVCGTIYLICLLFGY-DSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
T ++ VC IYL+ + FG+ + +++ P+ ++QV+R+ + + H S+ H++FN+
Sbjct: 89 TLLIMTVCIIIYLLQM-FGFGNGVFKLLHFPAFEGQQWQVWRWLSHALLHFSVTHIVFNL 147
Query: 85 LALVPLGSELERIMGSVRMFYITILLAT 112
L LG ++ER +GS ++ + ++ A
Sbjct: 148 LWWWQLGGDIERRLGSGKLLQLFVVSAA 175
>gi|262192237|ref|ZP_06050395.1| protein GlpG [Vibrio cholerae CT 5369-93]
gi|262031910|gb|EEY50490.1| protein GlpG [Vibrio cholerae CT 5369-93]
Length = 258
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 47/87 (54%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
FT ++ +C I+ + D + P+ ++Q++R+ + + H S++H+ FN+
Sbjct: 80 FTLFIMALCIIIFTLQTFGAGDEVFNALHFPALAGQQWQIWRWVSHALLHFSVMHIAFNL 139
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
L G +LE+ +GSVR+ + ++ A
Sbjct: 140 LWWWQFGGDLEQRLGSVRLIKLFVVSA 166
>gi|443670730|ref|ZP_21135859.1| Rhomboid family protein [Rhodococcus sp. AW25M09]
gi|443416665|emb|CCQ14196.1| Rhomboid family protein [Rhodococcus sp. AW25M09]
Length = 251
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 54 LPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATS 113
L S +++ ++R S H +H+L NM AL +G ++E I+G R + L
Sbjct: 63 LNSVLVANGDLFRLIGSGFVHIGPIHLLVNMFALYLIGRDVELILGRSRYLAVYFL---- 118
Query: 114 NAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIP 173
+LL L+N + A G SG +F L+ GAQ+ + L P
Sbjct: 119 --------SLLGGSASVMVLENPLAATA-GASGAVFGLL-------GAQAVILLRLKRSP 162
Query: 174 AKWYPLILLVLF-QVLMTNVSLLGHLCGILSGFAYTYGF 211
A +I L +F V + ++SL GH+ G+++G A T G
Sbjct: 163 APVLIIIALNIFISVSIPSISLWGHMGGLVAGAAVTAGL 201
>gi|421615034|ref|ZP_16056072.1| glpG protein [Rhodopirellula baltica SH28]
gi|408494207|gb|EKJ98827.1| glpG protein [Rhodopirellula baltica SH28]
Length = 329
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 55/93 (59%), Gaps = 11/93 (11%)
Query: 59 ISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILH 118
I + +++R T HGS +H++FNM+AL LGS +ER+ GS F ++LL + H
Sbjct: 184 IKKGEIWRLVTPAFLHGSTMHLVFNMMALFTLGSVVERLHGS--WFLGSLLLVS-----H 236
Query: 119 LLIALLVAHIPFYRLQNVMDECAIGFSGVIFSL 151
++ ++ +P + L++ M A+G SG +F +
Sbjct: 237 IIGMIVQVVLPDW-LESPM---AVGASGAVFGV 265
>gi|424029428|ref|ZP_17768961.1| rhomboid protease glpG [Vibrio cholerae HENC-01]
gi|408886962|gb|EKM25611.1| rhomboid protease glpG [Vibrio cholerae HENC-01]
Length = 280
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
Query: 26 TSAVVIVCGTIYLICLLFGY-DSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
T +++VC IY + + FG+ D + + P+ ++Q++R+ + + H S+ H++FN+
Sbjct: 100 TLLIMVVCAVIYFLQM-FGFGDGVFALLHFPAFEGQQWQLWRWVSHALLHFSVTHIVFNL 158
Query: 85 LALVPLGSELERIMGSVRMFYITILLAT 112
L LG ++ER + S ++ I ++ A
Sbjct: 159 LWWWQLGGDIERRLSSGKLLQIFLISAA 186
>gi|311742190|ref|ZP_07716000.1| rhomboid family protein [Aeromicrobium marinum DSM 15272]
gi|311314683|gb|EFQ84590.1| rhomboid family protein [Aeromicrobium marinum DSM 15272]
Length = 283
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 60/152 (39%), Gaps = 42/152 (27%)
Query: 65 YRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALL 124
+R TS H +LH+LFNM AL G +ER +GS R + +A
Sbjct: 123 WRLLTSAFLHAGVLHLLFNMYALYLFGPFVERALGSARYVAAYLTMAV------------ 170
Query: 125 VAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFN------IPAKWYP 178
FSG + L+ + + S +VFGLF + AK
Sbjct: 171 -------------------FSGAVVYLLTDPRTFTVGASGAVFGLFGYALVLLVRAKQDV 211
Query: 179 LILLVLFQV-----LMTNVSLLGHLCGILSGF 205
LLVL V L N+S GHL G ++G
Sbjct: 212 RTLLVLLAVNGVISLAPNISWQGHLGGFIAGL 243
>gi|297570706|ref|YP_003696480.1| rhomboid family protein [Arcanobacterium haemolyticum DSM 20595]
gi|296931053|gb|ADH91861.1| Rhomboid family protein [Arcanobacterium haemolyticum DSM 20595]
Length = 210
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 30/194 (15%)
Query: 21 SIPFFTSAVVIVCGTIYLICLLFGY---DSFYEICFLPSAVISRFQVYRFYTSIVFHGSL 77
+IP T+ + +C +I L Y + + F+P + + + +RF T H
Sbjct: 23 NIPPVTAVMSALC----IIATLASYAVPEVLFSYAFIP--LFAEAEPWRFLTGAFLHSGF 76
Query: 78 LHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVM 137
+H+LFN++AL+ LG+ELE + S R + + L ++ I A +
Sbjct: 77 MHILFNVMALIFLGAELEPALKSGR--FAALYLGSA-------IGGNAAVYAWSAWTGEW 127
Query: 138 DECAIGFSGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSL 194
+ A+G SG IF L +++ T R + L I A L + +S
Sbjct: 128 NTAAVGASGAIFGLFGALIVLTRALHTDMRGILILLGINA---------LIAITTPQISW 178
Query: 195 LGHLCGILSGFAYT 208
HL G L+G T
Sbjct: 179 QAHLGGFLTGIILT 192
>gi|225455418|ref|XP_002279126.1| PREDICTED: inactive rhomboid protein 1 isoform 2 [Vitis vinifera]
Length = 278
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 14/97 (14%)
Query: 56 SAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNA 115
V+S+ Q +R T I H ++H+L NML+LV +G LE+ G VR+ I +L +
Sbjct: 103 KKVVSKHQGWRLVTCIWLHAGIIHLLVNMLSLVLIGIRLEQQFGFVRIGVIYLLSGFGGS 162
Query: 116 ILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLI 152
+L L + + ++G SG +F L+
Sbjct: 163 VLSSLF--------------IQNSISVGASGALFGLL 185
>gi|392981076|ref|YP_006479664.1| intramembrane serine protease GlpG [Enterobacter cloacae subsp.
dissolvens SDM]
gi|392327009|gb|AFM61962.1| intramembrane serine protease GlpG [Enterobacter cloacae subsp.
dissolvens SDM]
Length = 276
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 47/87 (54%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
FT ++ C +++I + G S P F V+R++T + H S++H+LFN+
Sbjct: 96 FTLLLMAACIIVFIIMNVVGDQSVMIALAWPYDPSLDFDVWRYFTHALMHFSVMHILFNL 155
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
L LG +E+ +GS ++ ITI+ A
Sbjct: 156 LWWWYLGGAVEKRLGSGKLIVITIISA 182
>gi|123444164|ref|YP_001008134.1| intramembrane serine protease GlpG [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|420260414|ref|ZP_14763097.1| intramembrane serine protease GlpG [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|171704425|sp|A1JSF0.1|GLPG_YERE8 RecName: Full=Rhomboid protease GlpG; AltName: Full=Intramembrane
serine protease
gi|122091125|emb|CAL14008.1| probable membrane protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|404512230|gb|EKA26082.1| intramembrane serine protease GlpG [Yersinia enterocolitica subsp.
enterocolitica WA-314]
Length = 278
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 47/87 (54%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
T +V+++C IY++ + G + P Q++R+ + H SLLH+LFN+
Sbjct: 97 LTLSVMVLCIAIYILMQIVGDGAVMSWLAWPRDNSQYLQIWRWVSHAFLHFSLLHILFNL 156
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
+ L ++E+ +G+ ++ +TI+ A
Sbjct: 157 MWWWYLAGQMEKRLGTGKLLVLTIVSA 183
>gi|424589373|ref|ZP_18028832.1| rhomboid protease glpG [Vibrio cholerae CP1037(10)]
gi|429887043|ref|ZP_19368573.1| GlpG protein (membrane protein of glp regulon) [Vibrio cholerae
PS15]
gi|408037781|gb|EKG74155.1| rhomboid protease glpG [Vibrio cholerae CP1037(10)]
gi|429225990|gb|EKY32169.1| GlpG protein (membrane protein of glp regulon) [Vibrio cholerae
PS15]
Length = 277
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 48/87 (55%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
FT ++ +C I+ + D+ + P+ ++Q++R+ + + H S++H+ FN+
Sbjct: 99 FTLFIMALCIIIFTLQTFGAGDAVFNALHFPALAGQQWQIWRWVSHALLHFSVMHIAFNL 158
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
L G +LE+ +GS+R+ + ++ A
Sbjct: 159 LWWWQFGGDLEQRLGSIRLIKLFVVSA 185
>gi|420367866|ref|ZP_14868642.1| rhomboid protease glpG [Shigella flexneri 1235-66]
gi|391322821|gb|EIQ79493.1| rhomboid protease glpG [Shigella flexneri 1235-66]
Length = 276
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 46/86 (53%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T AV+ C +++ + G + P +F+ +R++T H SL+H+LFN+L
Sbjct: 97 TWAVMAACVLVFIAMNVMGDQAVMLWLAWPFDPTLKFEFWRYFTHAFMHFSLMHILFNLL 156
Query: 86 ALVPLGSELERIMGSVRMFYITILLA 111
LG +E+ +GS ++ IT++ A
Sbjct: 157 WWWYLGGAVEKRLGSGKLIVITVISA 182
>gi|305662826|ref|YP_003859114.1| rhomboid family protein [Ignisphaera aggregans DSM 17230]
gi|304377395|gb|ADM27234.1| Rhomboid family protein [Ignisphaera aggregans DSM 17230]
Length = 452
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 45/97 (46%), Gaps = 7/97 (7%)
Query: 52 CFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLA 111
F+P + Q YR +TS+ HG +LH+ FNM L G E+E +G R I L
Sbjct: 47 AFVPIMLQEPMQWYRIFTSMFLHGDILHIFFNMWFLYMFGKEVELSLGITRYLAIYFLSG 106
Query: 112 TSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVI 148
S + H A IP N++ A+G SG I
Sbjct: 107 ISATLFH------TAFIPILGSINLLIP-ALGASGAI 136
>gi|238757436|ref|ZP_04618622.1| Rhomboid protease glpG [Yersinia aldovae ATCC 35236]
gi|238704475|gb|EEP97006.1| Rhomboid protease glpG [Yersinia aldovae ATCC 35236]
Length = 281
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 47/87 (54%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
T +V+++C IY++ G + P QV+R+ + + H SLLH+LFN+
Sbjct: 100 LTLSVMVLCIAIYILMQFVGDLAVMSWLAWPRDESQYLQVWRWVSHALLHFSLLHILFNL 159
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
+ L ++E+ +G+ ++ +TI+ A
Sbjct: 160 MWWWYLAGQMEKRLGTGKLLVLTIVSA 186
>gi|163815124|ref|ZP_02206505.1| hypothetical protein COPEUT_01280 [Coprococcus eutactus ATCC 27759]
gi|158449533|gb|EDP26528.1| peptidase, S54 family [Coprococcus eutactus ATCC 27759]
Length = 333
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 55/103 (53%), Gaps = 10/103 (9%)
Query: 50 EICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITIL 109
E+ A+ + Q YRF TS+ H + H+L NM+ L+ LG+ +E I+G R+ Y+ +
Sbjct: 170 ELAVNVYAISEKRQYYRFLTSMFTHFGITHLLGNMVILIALGARIENIIG--RLNYVIVY 227
Query: 110 LATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLI 152
+ T L A ++I F+ ++ D A G SG IF L+
Sbjct: 228 IVTG------LAAAFASYINFF-CNDIYDYSA-GASGAIFGLL 262
>gi|424038453|ref|ZP_17777035.1| rhomboid protease glpG [Vibrio cholerae HENC-02]
gi|408894346|gb|EKM31096.1| rhomboid protease glpG [Vibrio cholerae HENC-02]
Length = 269
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
Query: 26 TSAVVIVCGTIYLICLLFGY-DSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
T +++VC IY + + FG+ D + + P+ ++Q++R+ + + H S+ H++FN+
Sbjct: 89 TLLIMVVCAVIYFLQM-FGFGDGVFALLHFPAFEGQQWQLWRWVSHALLHFSVTHIVFNL 147
Query: 85 LALVPLGSELERIMGSVRMFYITILLAT 112
L LG ++ER + S ++ I ++ A
Sbjct: 148 LWWWQLGGDIERRLSSGKLLQIFLISAA 175
>gi|417932692|ref|ZP_12576030.1| peptidase, S54 family [Propionibacterium acnes SK182B-JCVI]
gi|340774328|gb|EGR96815.1| peptidase, S54 family [Propionibacterium acnes SK182B-JCVI]
Length = 302
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 84/196 (42%), Gaps = 22/196 (11%)
Query: 27 SAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISR----FQVYRFYTSIVFHG-SLLHVL 81
S V +V T+ IC L + V++ + +R TS+ H S+ H+
Sbjct: 85 SDVPVVTWTLIGICFLVWIGEWLSPQVREGVVLAPRVGFIEPWRLVTSMFGHALSIFHIG 144
Query: 82 FNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECA 141
FNM AL LG LE +G R ++ L L+A A L NV D+
Sbjct: 145 FNMYALWVLGRSLEPFLGRARFLAAYLMSGLGGGALFCLMA--TASGTGTILPNV-DDGV 201
Query: 142 IGFSGVIFS----LIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGH 197
+G SG IF L++++ L G +R ++ + I A L+LF ++ +S H
Sbjct: 202 VGASGAIFGLFGVLLIVQRRL-GVSTRELWIVLAINAA------LLLF---ISGISWQAH 251
Query: 198 LCGILSGFAYTYGFFN 213
L G L+G FF
Sbjct: 252 LGGFLTGIVCGVIFFE 267
>gi|417320733|ref|ZP_12107275.1| GlpG protein [Vibrio parahaemolyticus 10329]
gi|328472448|gb|EGF43314.1| GlpG protein [Vibrio parahaemolyticus 10329]
Length = 280
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 49/87 (56%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T ++ VC IY + +L + + + P+ ++Q++R+ + + H S+ H++FN+L
Sbjct: 100 TLLIMTVCAVIYGLQMLGFGNGVFALLHFPAFEGQQWQLWRWVSHALLHFSVTHIIFNLL 159
Query: 86 ALVPLGSELERIMGSVRMFYITILLAT 112
LG ++ER +GS ++ I ++ A
Sbjct: 160 WWWQLGGDIERRLGSGKLLQIFVVSAA 186
>gi|299135309|ref|ZP_07028500.1| Rhomboid family protein [Afipia sp. 1NLS2]
gi|298590286|gb|EFI50490.1| Rhomboid family protein [Afipia sp. 1NLS2]
Length = 265
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%)
Query: 64 VYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLL 120
++ F T + H L H+ FNML ++P GS L R G VR F + A + A+ HLL
Sbjct: 75 IWSFLTYSLLHADLTHIGFNMLWMLPFGSALARRFGGVRFFVFLAITAVAGALAHLL 131
>gi|401678562|ref|ZP_10810522.1| Rhomboid protease glpG [Enterobacter sp. SST3]
gi|400214189|gb|EJO45115.1| Rhomboid protease glpG [Enterobacter sp. SST3]
Length = 276
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 48/87 (55%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
FT ++ C +++I + G S P F+V+R+++ + H S++H+LFN+
Sbjct: 96 FTLLLMAACIIVFIIMNVVGDQSVMIALAWPYDPSLEFEVWRYFSHALMHFSVMHILFNL 155
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
L LG +E+ +GS ++ ITI+ A
Sbjct: 156 LWWWYLGGAVEKRLGSGKLIVITIISA 182
>gi|227549462|ref|ZP_03979511.1| S54 family peptidase [Corynebacterium lipophiloflavum DSM 44291]
gi|227078461|gb|EEI16424.1| S54 family peptidase [Corynebacterium lipophiloflavum DSM 44291]
Length = 197
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 67/141 (47%), Gaps = 24/141 (17%)
Query: 66 RFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVR--MFYITILLATSNAILHLLIAL 123
R T+ H L H+ NML LV +G E+ER +G+ R + ++ LA+S A+L +
Sbjct: 63 RLLTAGFLHLDLSHLFVNMLMLVLIGGEIERFIGTARFVVAWVVGTLASSAAVLAM---- 118
Query: 124 LVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLV 183
D G SG +F+L+ + +++ +S ++ A L+L V
Sbjct: 119 ------------AFDTPTAGASGALFALLAVLVAIAYRRSS------DLRAPIALLVLNV 160
Query: 184 LFQVLMTNVSLLGHLCGILSG 204
F + VS+ GHL G+ +G
Sbjct: 161 AFTFIAPGVSVWGHLGGLAAG 181
>gi|344299724|gb|EGW30077.1| rhomboid protein 2 [Spathaspora passalidarum NRRL Y-27907]
Length = 273
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 72/166 (43%), Gaps = 20/166 (12%)
Query: 71 IVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIA-LLVAHIP 129
++FH + H N+L + + E G++ LLA A+ + L+ +L H
Sbjct: 63 LLFHTNFGHWFINVLGIATPLAMYEATHGTIYTGITLNLLAVITALQYCLVGQILYPH-- 120
Query: 130 FYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPA---KWY----PLILL 182
IG SG+IFSL+ TS Q+R V + + + K Y P I L
Sbjct: 121 ---------TGVIGLSGIIFSLLS-YTSYKEHQNRPVIHTYRVSSYEIKIYTLAVPFIFL 170
Query: 183 VLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESS 228
V +LM S GHL G+ +GF G+ L P ++ IE+
Sbjct: 171 VFMTILMPGSSFFGHLAGVFAGFLLGMGYLKKLFPPSTAIIWIENK 216
>gi|330836099|ref|YP_004410740.1| Peptidase S54, rhomboid domain-containing protein [Sphaerochaeta
coccoides DSM 17374]
gi|329748002|gb|AEC01358.1| Peptidase S54, rhomboid domain protein [Sphaerochaeta coccoides DSM
17374]
Length = 255
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 22/168 (13%)
Query: 49 YEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITI 108
Y + P+ V+ + V++F + + H + H+LFNML L GS +ER +GS R F +
Sbjct: 86 YYLAMRPALVMKGY-VWQFISYMFVHSGVSHILFNMLGLFIFGSMVERRIGS-REFLLFY 143
Query: 109 LLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFG 168
+L + + IA + A +G SGVI+ ++++ + VFG
Sbjct: 144 MLTGIVSGVFSFIAYMAA--------GTSAVSLVGASGVIYGIMLMFATFFPDARIFVFG 195
Query: 169 LFNIPAKWYPLILLVLFQVLM-------TNVSLLGHLCGILSGFAYTY 209
+F + A P+++++ F + + NV+ L HL G+ G AY Y
Sbjct: 196 IFPVRA---PMLVIIYFAIELFSQIRGGGNVAHLTHLAGL--GVAYLY 238
>gi|433659035|ref|YP_007276414.1| GlpG protein (membrane protein of glp regulon) [Vibrio
parahaemolyticus BB22OP]
gi|432509723|gb|AGB11240.1| GlpG protein (membrane protein of glp regulon) [Vibrio
parahaemolyticus BB22OP]
Length = 269
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 49/87 (56%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T ++ VC IY + +L + + + P+ ++Q++R+ + + H S+ H++FN+L
Sbjct: 89 TLLIMTVCAVIYGLQMLGFGNGVFALLHFPAFEGQQWQLWRWVSHALLHFSVTHIIFNLL 148
Query: 86 ALVPLGSELERIMGSVRMFYITILLAT 112
LG ++ER +GS ++ I ++ A
Sbjct: 149 WWWQLGGDIERRLGSGKLLQIFVVSAA 175
>gi|429195115|ref|ZP_19187166.1| peptidase, S54 family [Streptomyces ipomoeae 91-03]
gi|428669169|gb|EKX68141.1| peptidase, S54 family [Streptomyces ipomoeae 91-03]
Length = 296
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 13/93 (13%)
Query: 59 ISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILH 118
++ Q YR TS+ HGS++H+ FNML+L LG LE +G R + + + L
Sbjct: 128 VAEGQWYRLLTSMFLHGSVMHIAFNMLSLWWLGGPLEAALGRARYIALYFVSGLAGGALT 187
Query: 119 LLIALLVAHIPFYRLQNVMDECAIGFSGVIFSL 151
L+A ++ ++G SG IF L
Sbjct: 188 YLLA-------------APNQASLGASGAIFGL 207
>gi|28899725|ref|NP_799330.1| GlpG protein [Vibrio parahaemolyticus RIMD 2210633]
gi|153839843|ref|ZP_01992510.1| GlpG protein [Vibrio parahaemolyticus AQ3810]
gi|260361676|ref|ZP_05774703.1| rhomboid protease GlpG [Vibrio parahaemolyticus K5030]
gi|260897189|ref|ZP_05905685.1| rhomboid protease GlpG (Intramembrane serineprotease) [Vibrio
parahaemolyticus Peru-466]
gi|308126055|ref|ZP_05907537.2| rhomboid protease GlpG [Vibrio parahaemolyticus AQ4037]
gi|28807977|dbj|BAC61214.1| GlpG protein [Vibrio parahaemolyticus RIMD 2210633]
gi|149746638|gb|EDM57626.1| GlpG protein [Vibrio parahaemolyticus AQ3810]
gi|308089318|gb|EFO39013.1| rhomboid protease GlpG (Intramembrane serineprotease) [Vibrio
parahaemolyticus Peru-466]
gi|308107494|gb|EFO45034.1| rhomboid protease GlpG [Vibrio parahaemolyticus AQ4037]
gi|308111293|gb|EFO48833.1| rhomboid protease GlpG [Vibrio parahaemolyticus K5030]
Length = 280
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 49/87 (56%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T ++ VC IY + +L + + + P+ ++Q++R+ + + H S+ H++FN+L
Sbjct: 100 TLLIMTVCAVIYGLQMLGFGNGVFALLHFPAFEGQQWQLWRWVSHALLHFSVTHIIFNLL 159
Query: 86 ALVPLGSELERIMGSVRMFYITILLAT 112
LG ++ER +GS ++ I ++ A
Sbjct: 160 WWWQLGGDIERRLGSGKLLQIFVVSAA 186
>gi|291515609|emb|CBK64819.1| Uncharacterized membrane protein (homolog of Drosophila rhomboid)
[Alistipes shahii WAL 8301]
Length = 200
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 84/198 (42%), Gaps = 21/198 (10%)
Query: 16 NQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHG 75
N+++++ P + ++I LL D+ + C L S F Y+F T + H
Sbjct: 2 NRYFQTPPVVKNLIIINVLVYMATALLPVGDTIMQYCAL-SLGTPYFHTYQFITYMFLHA 60
Query: 76 SLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQN 135
+ H+ FNM AL G LE +GS R ++ A++ L AL +P
Sbjct: 61 NFEHIFFNMFALWMFGRTLEYELGSQRFLTFYMVCGVGAALIQYLTALAFGELPL----- 115
Query: 136 VMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIP----AKWYPLILLVLFQVL--- 188
+G SG + L++ + +V L P AKW+ +I V+ L
Sbjct: 116 ----LLVGASGAVMGLLL---AFGVMHPNAVIMLLIPPIPMKAKWFVIIYAVIELFLGWK 168
Query: 189 -MTNVSLLGHLCGILSGF 205
+ NV+ H+ G+L GF
Sbjct: 169 GVGNVAHFAHVGGMLWGF 186
>gi|116492498|ref|YP_804233.1| membrane-associated serine protease [Pediococcus pentosaceus ATCC
25745]
gi|421894340|ref|ZP_16324829.1| rhomboid family protein [Pediococcus pentosaceus IE-3]
gi|116102648|gb|ABJ67791.1| Membrane-associated serine protease [Pediococcus pentosaceus ATCC
25745]
gi|385272644|emb|CCG90201.1| rhomboid family protein [Pediococcus pentosaceus IE-3]
Length = 229
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 22/197 (11%)
Query: 23 PFFTSAVVIVCGTIYLICLLFGYDSFYEI-----CFLPSAVISRFQVYRFYTSIVFHGSL 77
PF T +V + ++L L G + + +P V + ++ +TS+ H
Sbjct: 15 PFVTQTIVGINILVFLWLTLIGGSTNISVLVTHGALVPVLVQNGQGLWTIFTSMFIHIGF 74
Query: 78 LHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVM 137
H+LFNM+AL +G LER++G + I I L A++ L N
Sbjct: 75 EHILFNMIALYFIGRLLERMIGHWKFVLIYIFSG------------LFANLASLALSNP- 121
Query: 138 DECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLM-TNVSLLG 196
+ + G SG IF +I + ++ Q R L ++ + +L L L+ TN++++
Sbjct: 122 NSISAGASGAIFGIIGVWLMMA-EQYREYPALIDMGKQMLLFSVLGLISGLLGTNMNIIA 180
Query: 197 HLCGILSGF--AYTYGF 211
HL G++SGF AY GF
Sbjct: 181 HLGGLVSGFLIAYVIGF 197
>gi|308094753|ref|ZP_05891717.2| rhomboid protease GlpG [Vibrio parahaemolyticus AN-5034]
gi|308092838|gb|EFO42533.1| rhomboid protease GlpG [Vibrio parahaemolyticus AN-5034]
Length = 269
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 49/87 (56%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T ++ VC IY + +L + + + P+ ++Q++R+ + + H S+ H++FN+L
Sbjct: 89 TLLIMTVCAVIYGLQMLGFGNGVFALLHFPAFEGQQWQLWRWVSHALLHFSVTHIIFNLL 148
Query: 86 ALVPLGSELERIMGSVRMFYITILLAT 112
LG ++ER +GS ++ I ++ A
Sbjct: 149 WWWQLGGDIERRLGSGKLLQIFVVSAA 175
>gi|302843892|ref|XP_002953487.1| hypothetical protein VOLCADRAFT_82188 [Volvox carteri f.
nagariensis]
gi|300261246|gb|EFJ45460.1| hypothetical protein VOLCADRAFT_82188 [Volvox carteri f.
nagariensis]
Length = 257
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 122/309 (39%), Gaps = 58/309 (18%)
Query: 1 MRPNIVSEAGLSTRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVIS 60
M P +V + W+ES+P T A V + L FY + + V S
Sbjct: 1 MPPRVVQATDVGHGPRAWYESLPPITRAYGTVLAVLALSASFKMITGFY-LVLIWQRVFS 59
Query: 61 RFQVYRFYTSIVFHGSL-LHVLFNMLALVPLGSELE-RIMGSVRMFYITILLATSNAILH 118
F+V+R T+ +F G + L ++F+++ LV G LE ++ Y+ +LL + +IL
Sbjct: 60 HFEVWRPLTTFLFGGRVNLTLIFHLVWLVTYGKVLETQVFQFQPADYLFMLLFGAASILA 119
Query: 119 LLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYP 178
+ L V + + +IF ++ + + Q S++GLF I A + P
Sbjct: 120 MGAVLQ---------YTVGVALLVNAAALIFMVMYVWSRHFPDQVLSIWGLFTIKAFYLP 170
Query: 179 LILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQP 238
VL L+T G GI +G Y Y Y A+ LL R P
Sbjct: 171 F-FYVLLDYLVTTEIPWGPCLGIAAGHLYFY--------LEDLYPAMGGPRLL----RTP 217
Query: 239 KFILCTGGNPSGYIPTYSGQNTSSSGLFSGNIWSNLSSWMPQRETSSQ--PTQDS--RFP 294
+F+ +N L+ W R T++ P QD+ F
Sbjct: 218 QFL----------------KNL-------------LADWGVGRRTNTHAAPGQDAFRAFQ 248
Query: 295 GRGRTLSSS 303
GRG+ L +S
Sbjct: 249 GRGQRLGAS 257
>gi|332163345|ref|YP_004299922.1| intramembrane serine protease GlpG [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|386310635|ref|YP_006006691.1| glpg protein (membrane protein of glp regulon) [Yersinia
enterocolitica subsp. palearctica Y11]
gi|418240328|ref|ZP_12866869.1| intramembrane serine protease GlpG [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|433549075|ref|ZP_20505121.1| GlpG protein (membrane protein of glp regulon) [Yersinia
enterocolitica IP 10393]
gi|318607840|emb|CBY29338.1| glpg protein (membrane protein of glp regulon) [Yersinia
enterocolitica subsp. palearctica Y11]
gi|325667575|gb|ADZ44219.1| intramembrane serine protease GlpG [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330863003|emb|CBX73136.1| rhomboid protease glpG [Yersinia enterocolitica W22703]
gi|351780378|gb|EHB22456.1| intramembrane serine protease GlpG [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|431790116|emb|CCO68161.1| GlpG protein (membrane protein of glp regulon) [Yersinia
enterocolitica IP 10393]
Length = 278
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 47/87 (54%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
T +V+++C IY++ + G + P Q++R+ + H SLLH+LFN+
Sbjct: 97 LTLSVMVLCIAIYVLMQIVGDGAVMSWLAWPRDNSQYLQIWRWVSHAFLHFSLLHILFNL 156
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
+ L ++E+ +G+ ++ +TI+ A
Sbjct: 157 MWWWYLAGQMEKRLGTGKLLVLTIVSA 183
>gi|194218908|ref|XP_001916190.1| PREDICTED: rhomboid domain-containing protein 2-like [Equus
caballus]
Length = 313
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 72/148 (48%), Gaps = 9/148 (6%)
Query: 64 VYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIAL 123
VYR T I + + + +L + + ER +G+VR + T++ A +AI+ L
Sbjct: 9 VYRLVTYIFVYENPVSLLCGAIIIWRFAGNFERTVGTVRHCFFTVIFAIFSAIIFLSFEA 68
Query: 124 LVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLV 183
+ + +L V D A GF+ V F+++ + + S + VFG+ +P+ P +LL
Sbjct: 69 VSS---LSKLGEVED--ARGFTPVAFAMLGVNSVRSRVRRALVFGMV-VPSMLVPWLLLC 122
Query: 184 LFQVLMTNVSLLGHLCGILSGFAYTYGF 211
L+ S L ++CG+ G TYG
Sbjct: 123 A-SWLIPQTSFLSNVCGL--GIGLTYGL 147
>gi|66816175|ref|XP_642097.1| transmembrane protein [Dictyostelium discoideum AX4]
gi|60470223|gb|EAL68203.1| transmembrane protein [Dictyostelium discoideum AX4]
Length = 288
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 67/129 (51%), Gaps = 3/129 (2%)
Query: 61 RFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLL 120
RF ++ F+T+ + S++ +FN++AL+ +G LE I GS R F IL+ + L
Sbjct: 10 RFYLWTFFTASLTETSIISGIFNIVALLFIGKYLEPIWGS-REFIKFILVVIFFSSLCSF 68
Query: 121 IALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLI 180
+ + F + +M GFSGVI + V L Q + F L I AKW P I
Sbjct: 69 FFFVFKFMFFGGIDLIMKANVCGFSGVIAAFSVALKQLITEQEFNFF-LIKIRAKWIPFI 127
Query: 181 LLVLFQVLM 189
L+LF+V++
Sbjct: 128 -LILFRVIV 135
>gi|157149004|ref|YP_001456323.1| intramembrane serine protease GlpG [Citrobacter koseri ATCC
BAA-895]
gi|172045594|sp|A8AQX4.1|GLPG_CITK8 RecName: Full=Rhomboid protease GlpG; AltName: Full=Intramembrane
serine protease
gi|157086209|gb|ABV15887.1| hypothetical protein CKO_04842 [Citrobacter koseri ATCC BAA-895]
Length = 276
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 47/86 (54%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T ++I C ++++ + G S P +F+ +R++T H SL+H+LFN+L
Sbjct: 97 TWLIMIACILVFVVMSIVGAQSVMVWLAWPFDPSLKFEFWRYFTHAFMHFSLMHILFNLL 156
Query: 86 ALVPLGSELERIMGSVRMFYITILLA 111
+G +E+ +GS ++ IT++ A
Sbjct: 157 WWWYIGGAVEKRLGSGKLIVITVISA 182
>gi|445067421|gb|AGE14563.1| rhomboid [Triticum aestivum]
Length = 323
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 74/169 (43%), Gaps = 30/169 (17%)
Query: 56 SAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNA 115
V+ Q +R T I H ++H+L NML+LV +G LE+ G VR+ I ++ +
Sbjct: 103 DKVVHEHQGWRLVTCIWLHAGVVHLLANMLSLVLVGLRLEQQFGFVRVGVIYLVSGVGGS 162
Query: 116 ILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAK 175
++ L + D ++G SG +F L+ GA +F + I
Sbjct: 163 VMSSLF--------------IRDNISVGASGALFGLL-------GAMLSELFTNWTIYTN 201
Query: 176 WYPLILLVLFQV-------LMTNVSLLGHLCGILSGFAYTYGFFNLLMP 217
++ +LF + ++ +V H+ G L+GF GF L+ P
Sbjct: 202 KAAALVTLLFVIAVNLAIGILPHVDNFAHIGGFLTGF--LLGFVLLMRP 248
>gi|403669619|ref|ZP_10934810.1| hypothetical protein KJC8E_12316 [Kurthia sp. JC8E]
Length = 206
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 17/143 (11%)
Query: 58 VISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAIL 117
+I++ + +R T+I HG +HVL NM L G ELERI G R F I +L +
Sbjct: 51 LIAQGEYWRVVTAIFIHGGFMHVLSNMFWLYVFGPELERIAGKARFFTIYMLAGILGNV- 109
Query: 118 HLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWY 177
F + ++ ++G SG IF ++ +L +R +F +
Sbjct: 110 ------------FTYIWQPLNYASVGASGAIFGILGAFLALV-YYTRKIFP--QLKQMIV 154
Query: 178 PLILL-VLFQVLMTNVSLLGHLC 199
PL+++ V+ L NV+++ H+
Sbjct: 155 PLVVISVIITFLQPNVNVIAHII 177
>gi|343512962|ref|ZP_08750076.1| protein GlpG [Vibrio scophthalmi LMG 19158]
gi|342794231|gb|EGU30008.1| protein GlpG [Vibrio scophthalmi LMG 19158]
Length = 274
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 83/188 (44%), Gaps = 25/188 (13%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
FT A++ C I+++ ++ P+ +QV+R+ + + H S++H+ FN+
Sbjct: 99 FTLAIMAACIGIFILQQFGAGQPVFDALHFPAFAGQEWQVWRWVSHALLHFSIMHIAFNL 158
Query: 85 LALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAI-- 142
L LG ++E+ +GS ++ + + A + I + E A
Sbjct: 159 LWWWQLGGDIEQRLGSGKLLQLFVFSAALSGIGQFWV-----------------EGANFG 201
Query: 143 GFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVL-----FQVLMTNVSLLGH 197
G SGV+++L V L G ++ L P + L+ LVL F + L+G
Sbjct: 202 GLSGVVYAL-VGYIWLMGYRAPEKGLLMPKPLIGFMLVWLVLGFVQPFMAIANTAHLVGL 260
Query: 198 LCGILSGF 205
L G++ G+
Sbjct: 261 LAGVMLGW 268
>gi|443894983|dbj|GAC72329.1| predicted membrane protein [Pseudozyma antarctica T-34]
Length = 425
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 106/257 (41%), Gaps = 31/257 (12%)
Query: 20 ESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLH 79
IP T ++ G I L C+L S + VIS+F ++R T F GS L
Sbjct: 5 RKIPPVTRTILGATGAITLPCIL-AITSPWRYALSWPLVISKFHLHRVVTCFFFGGSGLK 63
Query: 80 VLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDE 139
+LF++ + ++LE R T A+L + +L + P
Sbjct: 64 LLFDVFLIFRNSTDLELSHFGRRTAAYTW------ALLVMGTVILATNYPL--------G 109
Query: 140 CAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSL-LGHL 198
I F ++ +L+ + + + S S FG+ N P++W P + + + +L L +
Sbjct: 110 SPILFGPMLNALVYLWSRANPHSSVSFFGMVNCPSRWLPYVYIGI-DLLQGGPGLAIQSA 168
Query: 199 CGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFILCTGGNPSGYIPTYSGQ 258
G+++G Y Y + ++PG + + I P+F+ P P+ GQ
Sbjct: 169 TGLIAG--YVYWMLDQVLPG-------QQRRRRGSYIPTPRFLENL--LPDSLDPSLEGQ 217
Query: 259 ---NTSSSGLFSGNIWS 272
N ++ + G +W+
Sbjct: 218 NMGNRNARRVAGGTVWN 234
>gi|354725547|ref|ZP_09039762.1| intramembrane serine protease GlpG [Enterobacter mori LMG 25706]
Length = 276
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 48/87 (55%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
FT ++ C +++I + G S P +F V+R++T + H S++H+LFN+
Sbjct: 96 FTLLLMAACIIVFIIMNVVGDQSVMIALAWPYDPSLQFDVWRYFTHALMHFSVMHILFNL 155
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
L LG +E+ +GS ++ ITI+ A
Sbjct: 156 LWWWYLGGIVEKRLGSGKLIVITIISA 182
>gi|396586115|ref|ZP_10486089.1| peptidase, S54 family [Actinomyces sp. ICM47]
gi|395546456|gb|EJG14095.1| peptidase, S54 family [Actinomyces sp. ICM47]
Length = 241
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 93/219 (42%), Gaps = 25/219 (11%)
Query: 12 STRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSI 71
++RA Q P T A++ +C +YL +F + +P ++SR + T
Sbjct: 14 ASRAAQ--MGAPVVTYAMMAICILMYLATWVFPSLK-SSLALVPLFLMSR--PWTILTGA 68
Query: 72 VFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFY 131
HG LLH+LFNML+L +G +E ++G R + +L A + L L+ P
Sbjct: 69 FLHGGLLHILFNMLSLYWVGRAIEPVLGWWRFLTVYLLSALGGSAFILAWCLIQ---PSE 125
Query: 132 RLQNVMDECAIGFSGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVL 188
L +G SG +F L + + L GA + + L I +++ L
Sbjct: 126 LLVGT-----VGASGAVFGLFGAVFVLQRLGGADTTPILTLLGIN---------LVYGFL 171
Query: 189 MTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIES 227
+ +S H+ G + G A T+ L P A ++
Sbjct: 172 ASGISWQAHIGGAVVGVAATWVLARLARPRAGITEAAQN 210
>gi|395234264|ref|ZP_10412492.1| intramembrane serine protease GlpG [Enterobacter sp. Ag1]
gi|394731218|gb|EJF31022.1| intramembrane serine protease GlpG [Enterobacter sp. Ag1]
Length = 273
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T V+ VC ++++ + G+ + P RF+ +R++T + H SLLH+LFN+L
Sbjct: 97 TLIVIGVCIALFVLLNIVGFGPVISVLGWPLVPEQRFEFWRYFTHGLLHFSLLHILFNLL 156
Query: 86 ALVPLGSELERIMGS 100
LG LE+ +G+
Sbjct: 157 WWWYLGGALEKRLGT 171
>gi|302911024|ref|XP_003050402.1| hypothetical protein NECHADRAFT_63508 [Nectria haematococca mpVI
77-13-4]
gi|256731339|gb|EEU44689.1| hypothetical protein NECHADRAFT_63508 [Nectria haematococca mpVI
77-13-4]
Length = 569
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 13/92 (14%)
Query: 63 QVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIA 122
Q +RF TSI H ++H+LFN+L + +G ++ER +G VR + I I+ A
Sbjct: 332 QWFRFITSIFLHAGVVHILFNLLVQLTIGKDMERAIGPVRFLLVYISAGIFGNIMGGNYA 391
Query: 123 LLVAHIPFYRLQNVMDECAIGFSGVIFSLIVI 154
P Y ++G SG IF +I +
Sbjct: 392 P-----PGY--------ASMGASGAIFGIIAL 410
>gi|22122463|ref|NP_666114.1| rhomboid domain-containing protein 2 [Mus musculus]
gi|81879423|sp|Q8VEK2.1|RHBD2_MOUSE RecName: Full=Rhomboid domain-containing protein 2; AltName:
Full=Rhomboid-like protein 7
gi|17390840|gb|AAH18360.1| Rhomboid domain containing 2 [Mus musculus]
gi|26334761|dbj|BAC31081.1| unnamed protein product [Mus musculus]
gi|74139145|dbj|BAE38463.1| unnamed protein product [Mus musculus]
Length = 361
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 75/152 (49%), Gaps = 7/152 (4%)
Query: 56 SAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNA 115
S + +QVYR T I + + + +L + + ER +G+VR + T++ +A
Sbjct: 52 SEALRNWQVYRLVTYIFVYENPVSLLCGAIIIWRFAGNFERTVGTVRHCFFTLIFTVFSA 111
Query: 116 ILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAK 175
I++L + + +L V D A GF+ V F+++ + + S + VFG+ +P+
Sbjct: 112 IIYLSFESVSS---LSKLGEVED--ARGFTPVAFAMLGVTSVRSRMRRALVFGVV-VPSV 165
Query: 176 WYPLILLVLFQVLMTNVSLLGHLCGILSGFAY 207
P +LL L+ S L ++ G+L G +Y
Sbjct: 166 LVPWLLLCA-SWLIPQTSFLSNVSGLLIGLSY 196
>gi|374340237|ref|YP_005096973.1| hypothetical protein Marpi_1272 [Marinitoga piezophila KA3]
gi|372101771|gb|AEX85675.1| putative membrane protein [Marinitoga piezophila KA3]
Length = 235
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 73/156 (46%), Gaps = 35/156 (22%)
Query: 63 QVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLAT--SNAILHLL 120
Q +RF T++ HG +LH+ FN+ AL LG+ +ER+ G + ++TI LA+ IL +
Sbjct: 60 QYFRFITALFVHGGILHISFNLYALYYLGNIVERVYGPYK--FLTIYLASGIGGGILTQI 117
Query: 121 IALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLI 180
IP + ++G SG IF LI + L GA R + P P+
Sbjct: 118 F------IP--------NAFSVGASGAIFGLIGL---LFGAGFRD-----DTPPMLKPMT 155
Query: 181 LLVLFQVLMTNVSL---------LGHLCGILSGFAY 207
L V++ N+ L H+ G+L GF +
Sbjct: 156 GTALLPVILINLFLGFTSSGINNFAHIGGLLVGFTF 191
>gi|403509381|ref|YP_006641019.1| rhomboid family protein [Nocardiopsis alba ATCC BAA-2165]
gi|402803589|gb|AFR10999.1| rhomboid family protein [Nocardiopsis alba ATCC BAA-2165]
Length = 256
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 14/96 (14%)
Query: 56 SAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNA 115
V+ + YR T+ HG +LH+LFN A+ LG +LER +G R + L A S +
Sbjct: 77 QGVVWHGEWYRLITAAFLHGGVLHLLFNSYAMYALGPQLERWLGHGRFLALWFLGALSGS 136
Query: 116 ILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSL 151
+L L+ ++ ++G SG IF+L
Sbjct: 137 VLSLI--------------ATPNQPSVGASGAIFAL 158
>gi|389627590|ref|XP_003711448.1| rhomboid family membrane protein [Magnaporthe oryzae 70-15]
gi|351643780|gb|EHA51641.1| rhomboid family membrane protein [Magnaporthe oryzae 70-15]
gi|440465662|gb|ELQ34973.1| rhomboid family membrane protein [Magnaporthe oryzae Y34]
gi|440480579|gb|ELQ61238.1| rhomboid family membrane protein [Magnaporthe oryzae P131]
Length = 558
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 63 QVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYI 106
Q +RF T I H L+H+ FNML + LG E+E+ +GS+R F +
Sbjct: 297 QWFRFITPIFMHAGLIHIGFNMLLQLTLGREMEQAIGSIRFFLV 340
>gi|325972771|ref|YP_004248962.1| peptidase S54, rhomboid domain [Sphaerochaeta globus str. Buddy]
gi|324028009|gb|ADY14768.1| Peptidase S54, rhomboid domain [Sphaerochaeta globus str. Buddy]
Length = 212
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 96/194 (49%), Gaps = 26/194 (13%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
FT +V++ +YL+ S Y + +PS V+ + V++ +T + HG H+LFNM
Sbjct: 19 FTLKLVVLNALVYLLTAYIYPRSAYYLAMIPSFVLGGY-VWQPFTYMFVHGGFNHLLFNM 77
Query: 85 LALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGF 144
L+L GS +E+ +GS + F + LLA L + +V+ I +Y + +G
Sbjct: 78 LSLFIFGSMVEKRIGS-KEFLLFYLLAG-------LFSGIVSFISYYLAGT--NVILVGA 127
Query: 145 SGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMT---------NVSLL 195
SG I++++++ VFG + A IL++L+ ++ NV+ L
Sbjct: 128 SGAIYAVLLMFAVFYPYSVIFVFGFIPVRAP----ILVILYAIIELSSQVFGRGGNVAHL 183
Query: 196 GHLCGILSGFAYTY 209
HL G++ FAY Y
Sbjct: 184 THLSGLV--FAYLY 195
>gi|375092943|ref|ZP_09739208.1| putative membrane protein [Saccharomonospora marina XMU15]
gi|374653676|gb|EHR48509.1| putative membrane protein [Saccharomonospora marina XMU15]
Length = 309
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 70/160 (43%), Gaps = 25/160 (15%)
Query: 48 FYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMF--Y 105
F + P + + + +R TS H LLH+ NMLAL LG +LE ++G VR Y
Sbjct: 125 FNDGVLWPVGIAAADEWWRLVTSGFLHFGLLHIGMNMLALWILGRDLELLLGKVRFLAVY 184
Query: 106 ITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRS 165
+L S A+ ++ G SG I+ L+ GA +
Sbjct: 185 FVSMLGGSAAVFAF---------------GAVNTGTAGASGAIYGLM-------GAILVA 222
Query: 166 VFGLFNIPAKWYPLILL-VLFQVLMTNVSLLGHLCGILSG 204
V L P +I+L V+ + + +SLLGHL G++ G
Sbjct: 223 VLRLRLNPTAAIGIIVLNVVLTISIPGISLLGHLGGLVVG 262
>gi|296453230|ref|YP_003660373.1| rhomboid family protein [Bifidobacterium longum subsp. longum
JDM301]
gi|296182661|gb|ADG99542.1| Rhomboid family protein [Bifidobacterium longum subsp. longum
JDM301]
Length = 284
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 7/93 (7%)
Query: 17 QWWESIPFFTSAVVIVCGTIYLICLLFGYDS---FYEICFLPSAVISRF--QVYRFYTSI 71
QW P T A+++ C ++L+ +L G+ + + +L A R + + TS+
Sbjct: 46 QWERGGPVMTWALIVACVAVWLLEVLLGFIAPGLRAWLMYLGMAAPVRLVAEPWTLITSM 105
Query: 72 VFHG--SLLHVLFNMLALVPLGSELERIMGSVR 102
H SLLH+LFNM+AL +G LER++G R
Sbjct: 106 FLHAPNSLLHILFNMIALYSVGPVLERMIGHWR 138
>gi|456387124|gb|EMF52637.1| hypothetical protein SBD_5713 [Streptomyces bottropensis ATCC
25435]
Length = 297
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 13/93 (13%)
Query: 59 ISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILH 118
++ Q YR TS+ HGS+ H+LFNML+L +G LE +G R + + + + L
Sbjct: 128 VAEGQWYRLVTSMFLHGSVTHILFNMLSLWWIGGPLEAALGRARYLTLYFVSGLAGSALT 187
Query: 119 LLIALLVAHIPFYRLQNVMDECAIGFSGVIFSL 151
L+A ++ ++G SG IF L
Sbjct: 188 YLLA-------------APNQPSLGASGAIFGL 207
>gi|261250000|ref|ZP_05942577.1| protein GlpG [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|417955538|ref|ZP_12598553.1| Integral membrane protein (Rhomboid family) [Vibrio orientalis CIP
102891 = ATCC 33934]
gi|260939504|gb|EEX95489.1| protein GlpG [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|342812894|gb|EGU47880.1| Integral membrane protein (Rhomboid family) [Vibrio orientalis CIP
102891 = ATCC 33934]
Length = 278
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/87 (22%), Positives = 49/87 (56%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T V++VC I+++ ++ ++ P+ +Q++R++ + H S++H+ FN+L
Sbjct: 100 TLLVMLVCSVIFVLQQFGMSNAIFQALHFPALAGQEWQLWRWFGHALLHFSVMHIAFNLL 159
Query: 86 ALVPLGSELERIMGSVRMFYITILLAT 112
LG ++E+ +GS ++ + ++ A
Sbjct: 160 WWWQLGGDIEQKLGSTKLIQLFLVSAA 186
>gi|283797031|ref|ZP_06346184.1| rhomboid protease GluP [Clostridium sp. M62/1]
gi|291075447|gb|EFE12811.1| peptidase, S54 family [Clostridium sp. M62/1]
Length = 205
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 37/70 (52%)
Query: 54 LPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATS 113
+P V+ + YR TS+ H S+ H+L NML L LG LE+I+G VR +L
Sbjct: 44 IPVLVVENGEYYRLITSVFLHFSIRHLLNNMLVLFILGDRLEQILGGVRYLLFYLLCGLG 103
Query: 114 NAILHLLIAL 123
I+ L+ L
Sbjct: 104 ANIVSLIFDL 113
>gi|321159599|pdb|2XTU|A Chain A, Structure Of E.Coli Rhomboid Protease Glpg Active Site
Mutant, S201t In Trigonal Crystal Form
Length = 181
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T ++I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 7 TWVMMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLL 66
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ ALL ++ Q G +
Sbjct: 67 WWWYLGGAVEKRLGSGKLIVIT-----------LISALLSGYVQ----QKFSGPWFGGLT 111
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 112 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFD-----LFGMSMANGA--- 163
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 164 HIAGLAVGLAMAF 176
>gi|395842988|ref|XP_003804048.1| PREDICTED: LOW QUALITY PROTEIN: rhomboid domain-containing protein
2 [Otolemur garnettii]
Length = 441
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 74/153 (48%), Gaps = 7/153 (4%)
Query: 54 LPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATS 113
L S + +QVYR T I + + + +L + + ER +G+VR + T++
Sbjct: 112 LKSEALRNWQVYRLVTYIFVYENPVSLLCGAIIIWRFAGNFERTVGTVRHCFFTLIFTVF 171
Query: 114 NAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIP 173
+AI+ L + + +L V D A GF+ V F+++ + T S + VFG+ +P
Sbjct: 172 SAIIFLSFEAVSS---LSKLGEVED--ARGFTPVAFAMLGVTTVRSRMRRALVFGVV-VP 225
Query: 174 AKWYPLILLVLFQVLMTNVSLLGHLCGILSGFA 206
+ P +LL L+ S L ++CG+ G A
Sbjct: 226 SVLVPWLLLGA-SWLIPQTSFLSNVCGLSIGLA 257
>gi|348027528|ref|YP_004870214.1| glpG protein [Glaciecola nitratireducens FR1064]
gi|347944871|gb|AEP28221.1| putative glpG protein [Glaciecola nitratireducens FR1064]
Length = 323
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 89/189 (47%), Gaps = 21/189 (11%)
Query: 20 ESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPS--AVISRFQVYRFYTSIVFHGSL 77
+S PF S V+ +C ++L+ L ++ + + S + Q +R +T H +
Sbjct: 134 KSTPFM-SLVLFICLGVFLLSYLGAFNYILQALTIRSLDELAQSNQWWRLFTPAFIHFGV 192
Query: 78 LHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVM 137
+H++FN++ LGS+LER GS+ + I + A S+ + LL++ P +
Sbjct: 193 IHIVFNLIWWWVLGSQLERSFGSISLAVIFAIAAISSNVAQLLVS-----GPNFG----- 242
Query: 138 DECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVL--FQVLMTNVSLL 195
G SGV+++L + + GL N ++ L L L ++L N++
Sbjct: 243 -----GLSGVVYALFGYVWWIGWLRPSWGIGLPN-SLVYFLLAWLALGYLEILWVNMANE 296
Query: 196 GHLCGILSG 204
HL G++SG
Sbjct: 297 AHLFGLISG 305
>gi|414162087|ref|ZP_11418334.1| hypothetical protein HMPREF9697_00235 [Afipia felis ATCC 53690]
gi|410879867|gb|EKS27707.1| hypothetical protein HMPREF9697_00235 [Afipia felis ATCC 53690]
Length = 267
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%)
Query: 64 VYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLL 120
V+ F T + H L H+ FNML ++P GS L R G VR F + + + A+ HLL
Sbjct: 72 VWSFVTYSLLHADLAHIGFNMLWMLPFGSALARRFGGVRFFIFLAITSVAGALAHLL 128
>gi|326524840|dbj|BAK04356.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 333
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 87/193 (45%), Gaps = 16/193 (8%)
Query: 21 SIPFFTSAVVIVCGTIYLI--CLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLL 78
S P T+A++ +YL + + F P +I + RF+ S +H S
Sbjct: 34 SRPPVTAALIAANALVYLRPGAVDAHLPRLRHVMFNPHLIIKFSDLRRFFLSAFYHLSEG 93
Query: 79 HVLFNMLALVPLGSELERIMGSVRMFYITI-LLATSNAILHLLIALLVA---HIPFYRLQ 134
H NM +L+ G +LE MGS + + LL S LL L+ + +Y
Sbjct: 94 HFFMNMASLLHTGVKLETSMGSPEFASMVVSLLGLSQGFTLLLSKGLLLLGNDMAYY--- 150
Query: 135 NVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSL 194
+ + GFSGV+ + V+ L+ + V+ ++P+K+ L+ L++ L
Sbjct: 151 ----QYSAGFSGVLLGMNVV---LNAREGNVVWQGVSVPSKYAALLELLVIHAFNPEAHL 203
Query: 195 LGHLCGILSGFAY 207
+ ++ GIL+G AY
Sbjct: 204 VCNVGGILAGLAY 216
>gi|23465179|ref|NP_695782.1| rhomboid family membrane protein [Bifidobacterium longum NCC2705]
gi|227547444|ref|ZP_03977493.1| rhomboid family membrane protein [Bifidobacterium longum subsp.
longum ATCC 55813]
gi|322688231|ref|YP_004207965.1| hypothetical protein BLIF_0040 [Bifidobacterium longum subsp.
infantis 157F]
gi|322690244|ref|YP_004219814.1| hypothetical protein BLLJ_0052 [Bifidobacterium longum subsp.
longum JCM 1217]
gi|384202422|ref|YP_005588169.1| hypothetical protein BLNIAS_02760 [Bifidobacterium longum subsp.
longum KACC 91563]
gi|419847899|ref|ZP_14371036.1| peptidase, S54 family [Bifidobacterium longum subsp. longum 1-6B]
gi|419849390|ref|ZP_14372436.1| peptidase, S54 family [Bifidobacterium longum subsp. longum 35B]
gi|419852126|ref|ZP_14375022.1| peptidase, S54 family [Bifidobacterium longum subsp. longum 2-2B]
gi|23325803|gb|AAN24418.1| conserved membrane protein in rhomboid family [Bifidobacterium
longum NCC2705]
gi|227212091|gb|EEI79987.1| rhomboid family membrane protein [Bifidobacterium longum subsp.
infantis ATCC 55813]
gi|320455100|dbj|BAJ65722.1| conserved hypothetical protein [Bifidobacterium longum subsp.
longum JCM 1217]
gi|320459567|dbj|BAJ70187.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis 157F]
gi|338755429|gb|AEI98418.1| hypothetical protein BLNIAS_02760 [Bifidobacterium longum subsp.
longum KACC 91563]
gi|386409317|gb|EIJ24179.1| peptidase, S54 family [Bifidobacterium longum subsp. longum 1-6B]
gi|386411745|gb|EIJ26457.1| peptidase, S54 family [Bifidobacterium longum subsp. longum 2-2B]
gi|386411928|gb|EIJ26627.1| peptidase, S54 family [Bifidobacterium longum subsp. longum 35B]
Length = 281
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 7/93 (7%)
Query: 17 QWWESIPFFTSAVVIVCGTIYLICLLFGYDS---FYEICFLPSAVISRF--QVYRFYTSI 71
QW P T A+++ C ++L+ +L G+ + + +L A R + + TS+
Sbjct: 43 QWERGGPVMTWALIVACVAVWLLEVLLGFIAPGLRAWLMYLGMAAPVRLVAEPWTLITSM 102
Query: 72 VFHG--SLLHVLFNMLALVPLGSELERIMGSVR 102
H SLLH+LFNM+AL +G LER++G R
Sbjct: 103 FLHAPNSLLHILFNMIALYSVGPVLERMIGHWR 135
>gi|375335649|ref|ZP_09776993.1| rhomboid family protein [Succinivibrionaceae bacterium WG-1]
Length = 297
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 36/61 (59%)
Query: 48 FYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYIT 107
F + F + +I+ FQV+R +T + HG ++H+LFN++ L +E+ +G R+ +
Sbjct: 133 FNALNFNANEIINNFQVWRIFTPCIMHGGIVHILFNLVMFSVLSESIEKSLGKYRLLLVV 192
Query: 108 I 108
+
Sbjct: 193 L 193
>gi|271961709|ref|YP_003335905.1| rhomboid-like protein [Streptosporangium roseum DSM 43021]
gi|270504884|gb|ACZ83162.1| rhomboid-like protein [Streptosporangium roseum DSM 43021]
Length = 291
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 61/133 (45%), Gaps = 30/133 (22%)
Query: 76 SLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQN 135
+L H+LFNM AL +G ELER +GS+R + +L A ++ L +
Sbjct: 135 ALTHILFNMWALYAIGPELERRLGSLRFLVLYLLSALGGSVAIYLFGI------------ 182
Query: 136 VMDECAIGFSGVIF----SLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTN 191
A+G SG I+ +L V+ L G +R V L I V+ + +
Sbjct: 183 ----AAVGASGAIYGMFGALFVVSKKL-GYDARGVLWLIGIN---------VVLTFTVPS 228
Query: 192 VSLLGHLCGILSG 204
+S GHL G+++G
Sbjct: 229 ISWQGHLGGLITG 241
>gi|154508338|ref|ZP_02043980.1| hypothetical protein ACTODO_00835 [Actinomyces odontolyticus ATCC
17982]
gi|153797972|gb|EDN80392.1| peptidase, S54 family [Actinomyces odontolyticus ATCC 17982]
Length = 231
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 90/198 (45%), Gaps = 23/198 (11%)
Query: 23 PFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLF 82
P T A++ +C +Y++ LL + +P+ +++ + T HG ++H+LF
Sbjct: 13 PVVTYAMMAICVLMYVVTLLVPTTKL-SLALVPARLMA--HPWTVLTGAFLHGGIMHILF 69
Query: 83 NMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAI 142
NML+L +G +E ++G R + ++ A + L+ L+ F +
Sbjct: 70 NMLSLYWVGRAIEPVLGRWRFLTLYLVSALGGSAFILVWCLIQPSEIFVS--------TV 121
Query: 143 GFSGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLC 199
G SG +F L + + L G+ + ++ L I +++ +++ +S GH+
Sbjct: 122 GASGAVFGLFGAVFVLQRLGGSDTTAILTLLGIN---------LVYGFMVSGISWQGHIG 172
Query: 200 GILSGFAYTYGFFNLLMP 217
G ++G T+ ++ P
Sbjct: 173 GAIAGVCATWVLVHMARP 190
>gi|357390844|ref|YP_004905685.1| putative peptidase S54 family protein [Kitasatospora setae KM-6054]
gi|311897321|dbj|BAJ29729.1| putative peptidase S54 family protein [Kitasatospora setae KM-6054]
Length = 307
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 63/132 (47%), Gaps = 29/132 (21%)
Query: 62 FQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLAT---SNAILH 118
+ YR ++ HG L+H+ N+ +L LG +LER++G R Y+T+ L + NA+ +
Sbjct: 140 LEWYRLVSAQFVHGGLMHIAANVFSLWVLGPQLERVLGRAR--YLTLYLVSGIAGNALGY 197
Query: 119 LLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYP 178
LL D A+G SG IF L+ + +F + P + P
Sbjct: 198 LLTG--------------ADMWAVGASGAIFGLL--------GATAVLFRVTRTPMQ--P 233
Query: 179 LILLVLFQVLMT 190
+I L++ ++MT
Sbjct: 234 VIALLVVNLVMT 245
>gi|86749273|ref|YP_485769.1| rhomboid-like protein [Rhodopseudomonas palustris HaA2]
gi|86572301|gb|ABD06858.1| Rhomboid-like protein [Rhodopseudomonas palustris HaA2]
Length = 279
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 63 QVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLL 120
+++ F T + H +L H+ FN+L L+P GS L R G+ R F + A A+ HLL
Sbjct: 100 KIWTFVTYSLLHANLSHIFFNVLWLLPFGSALARRFGAARFFLFMAVTAIGGALAHLL 157
>gi|441505844|ref|ZP_20987824.1| GlpG protein (membrane protein of glp regulon) [Photobacterium sp.
AK15]
gi|441426574|gb|ELR64056.1| GlpG protein (membrane protein of glp regulon) [Photobacterium sp.
AK15]
Length = 280
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 24/185 (12%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
F +V++V IY + L + P ++Q++RF++ + H S +H++FN
Sbjct: 99 FCLSVMVVAIAIYALWLFGLQQPVFNWLHFPFMDGDQWQIWRFFSHALLHFSTVHIVFNC 158
Query: 85 LALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGF 144
L LG +LER GS ++ + ++ A + + H P + G
Sbjct: 159 LWWWLLGGQLERHSGSSKLMQVFLISALISGFAQFWL-----HGPNFG----------GL 203
Query: 145 SGVIFSLIVIETSLSG-AQSRSVFGLFNIPAKW--YPLILLVL--FQVLMTNVSLLGHLC 199
SGV+++L+ + A R + IP + + LI LVL Q L N++ + HL
Sbjct: 204 SGVVYALMGYFWWMGWLAPERGL----TIPKSYVAFMLIWLVLGFAQPLGVNMANMAHLF 259
Query: 200 GILSG 204
G++SG
Sbjct: 260 GLISG 264
>gi|281421497|ref|ZP_06252496.1| rhomboid family protein [Prevotella copri DSM 18205]
gi|281404569|gb|EFB35249.1| rhomboid family protein [Prevotella copri DSM 18205]
Length = 312
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 91/211 (43%), Gaps = 25/211 (11%)
Query: 20 ESIPFFTSAVVIVCGTIYLICLLF-----GYDSFYEICFLPSAVISRFQVYRFYTSIVFH 74
+IP T ++IV +L C+L G ++ L + S F +Y+ T + H
Sbjct: 2 RNIPIVTKNLLIVNVVAFLACMLMDKSMGGGSGLTDMFGLHFFLASDFHIYQLVTYMFMH 61
Query: 75 GSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILH---LLIALLVAHIPFY 131
G H+LFNM AL G +ER+ G + + I+ + I + + Y
Sbjct: 62 GGFQHILFNMFALWMFGCVVERVWGPKKFLFYYIVCGVGAGLFQEAAQYITYVAKDMAAY 121
Query: 132 RLQNV------MDE-----CAIGFSGVIFSLIVIETSLSGAQSRSVFGL-FNIPAKW--- 176
+V M++ +G SG I+++++ + + +F L I AK+
Sbjct: 122 DYVSVNGARITMEQYLNLWTTVGASGAIYAILLAFGMIYPNERLFIFPLPVPIKAKFFVI 181
Query: 177 -YPLILLV-LFQVLMTNVSLLGHLCGILSGF 205
Y +I LV F + V+ + HL G++ GF
Sbjct: 182 GYAVIELVSTFSLSDDGVAHIAHLGGMVFGF 212
>gi|449117125|ref|ZP_21753569.1| hypothetical protein HMPREF9726_01554 [Treponema denticola H-22]
gi|448952389|gb|EMB33193.1| hypothetical protein HMPREF9726_01554 [Treponema denticola H-22]
Length = 209
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 69/158 (43%), Gaps = 13/158 (8%)
Query: 54 LPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATS 113
+P V+ ++F+T HG H+ FNMLAL G +E +G+ +L+ T
Sbjct: 43 VPILVVEAQTYWQFFTYQFVHGDFFHLAFNMLALFFFGVPVECKIGTKEFILYYLLIGTI 102
Query: 114 NAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIP 173
IL L+ Y IG SG IF ++++ L ++G+ +P
Sbjct: 103 GGILSFLV---------YAATGFYTITLIGASGAIFGVLLLYAVLYPNSVIYIWGVIPVP 153
Query: 174 AKW----YPLILLVLFQVLMTNVSLLGHLCGILSGFAY 207
A Y +I L+ + V+ L H G+++G+ Y
Sbjct: 154 APLLILGYAVIELISIFSIGDGVAHLTHFIGLIAGWVY 191
>gi|403251941|ref|ZP_10918256.1| putative membrane protein [actinobacterium SCGC AAA027-L06]
gi|402914686|gb|EJX35694.1| putative membrane protein [actinobacterium SCGC AAA027-L06]
Length = 178
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 55/117 (47%), Gaps = 16/117 (13%)
Query: 59 ISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILH 118
I+ Q YR T + HG LH+LFNMLAL LG +E G + +I
Sbjct: 37 INNGQWYRLLTVALVHGGWLHLLFNMLALYSLGFTIENYFGKNKYIFI------------ 84
Query: 119 LLIALLVAHIPFYRLQNVMDECAIGFSGVIFSL---IVIETSLSGAQSRSVFGLFNI 172
LL +L+ + Y L N + A+G SG+IF L +++ GA R GL +
Sbjct: 85 LLTSLVFGSLTSY-LFNPLTSFAVGSSGMIFGLFGCLLVIGKRMGANLREGLGLIGL 140
>gi|213690994|ref|YP_002321580.1| rhomboid family protein [Bifidobacterium longum subsp. infantis
ATCC 15697 = JCM 1222]
gi|384198092|ref|YP_005583835.1| hypothetical protein [Bifidobacterium longum subsp. infantis ATCC
15697 = JCM 1222]
gi|213522455|gb|ACJ51202.1| Rhomboid family protein [Bifidobacterium longum subsp. infantis
ATCC 15697 = JCM 1222]
gi|320457044|dbj|BAJ67665.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis ATCC 15697 = JCM 1222]
Length = 284
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 7/93 (7%)
Query: 17 QWWESIPFFTSAVVIVCGTIYLICLLFGYDS---FYEICFLPSAVISRF--QVYRFYTSI 71
QW P T A+++ C ++L+ +L G+ + + +L A R + + TS+
Sbjct: 46 QWERGGPVMTWALIVACVAVWLLEVLLGFIAPGLRAWLMYLGMAAPVRLVAEPWTLITSM 105
Query: 72 VFHG--SLLHVLFNMLALVPLGSELERIMGSVR 102
H SLLH+LFNM+AL +G LER++G R
Sbjct: 106 FLHAPNSLLHILFNMIALYSVGPVLERMIGHWR 138
>gi|67526515|ref|XP_661319.1| hypothetical protein AN3715.2 [Aspergillus nidulans FGSC A4]
gi|40740733|gb|EAA59923.1| hypothetical protein AN3715.2 [Aspergillus nidulans FGSC A4]
Length = 916
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 100/232 (43%), Gaps = 16/232 (6%)
Query: 13 TRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIV 72
+R + +P FT VV+ +L+ L + +P + + +YR T
Sbjct: 15 SRVRSYLLRLPLFTRLVVLAIIVFWLLELQTVWSVVQWGALIPDELGLK-TMYRTNTYPF 73
Query: 73 FHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITI-LLATSNAILHLLIALLVAHIPFY 131
H H N+LAL PL E G++ + + L+T A L++LI + H
Sbjct: 74 IHTGFFHAFLNLLALTPLLERFEAEHGTLTAIALFMGPLSTFPAGLYVLIEKFILH---- 129
Query: 132 RLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVF--GLFNIPAKWYPLILLVLFQVLM 189
+ +G S +F L+ E ++ +S F G IP PL++ VL +L+
Sbjct: 130 -----GNNSVVGSSVWVFLLLGSE-AIRTYKSHPYFSLGTTKIPTWTSPLLVCVLVWILV 183
Query: 190 TNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFI 241
N S LGHLC IL G+ G+ +L+P IE L+ R P ++
Sbjct: 184 PNTSFLGHLCSILIGYLLGLGYLKVLVPPEKVLRFIEGK--LNLLGRLPHYV 233
>gi|419854227|ref|ZP_14377016.1| peptidase, S54 family [Bifidobacterium longum subsp. longum 44B]
gi|386417921|gb|EIJ32391.1| peptidase, S54 family [Bifidobacterium longum subsp. longum 44B]
Length = 284
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 7/93 (7%)
Query: 17 QWWESIPFFTSAVVIVCGTIYLICLLFGYDS---FYEICFLPSAVISRF--QVYRFYTSI 71
QW P T A+++ C ++L+ +L G+ + + +L A R + + TS+
Sbjct: 46 QWERGGPVMTWALIVACVAVWLLEVLLGFIAPGLRAWLMYLGMAAPVRLVAEPWTLITSM 105
Query: 72 VFHG--SLLHVLFNMLALVPLGSELERIMGSVR 102
H SLLH+LFNM+AL +G LER++G R
Sbjct: 106 FLHAPNSLLHILFNMIALYSVGPVLERMIGHWR 138
>gi|91772866|ref|YP_565558.1| rhomboid-like protein [Methanococcoides burtonii DSM 6242]
gi|91711881|gb|ABE51808.1| Rhomboid family protein with AN1-like zinc finger domain
[Methanococcoides burtonii DSM 6242]
Length = 279
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 88/195 (45%), Gaps = 25/195 (12%)
Query: 28 AVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLAL 87
A++ +C + + ++ GY + +++ LPS + + + T + H S H+ FNML L
Sbjct: 95 AIIFICIVSFFLKIIPGYVASFQL--LPSLMF--LKPWTLITHMFLHASFGHLFFNMLVL 150
Query: 88 VPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGV 147
G ELE+ +G Y+ I+ ++A + Y + + + IG SG
Sbjct: 151 FFFGRELEKRIGKDLFLYV------------YFISGIIAALG-YSITSANNVPIIGASGA 197
Query: 148 IFSLIVIETSLSGAQSRSVFGLFNIPAK-WYPLILLVLFQVLMTN----VSLLGHLCGIL 202
I + T L A + V+ F IP K Y L+L VL ++ N V+ HL G+L
Sbjct: 198 IMGVFAALTIL--APNMEVYVYF-IPMKIKYALLLFVLLDFMLLNANDMVAHTAHLSGVL 254
Query: 203 SGFAYTYGFFNLLMP 217
G Y ++P
Sbjct: 255 VGVIMGYKIKKTIVP 269
>gi|321159600|pdb|2XTV|A Chain A, Structure Of E.Coli Rhomboid Protease Glpg, Active Site
Mutant, S201t, Orthorhombic Crystal Form
Length = 180
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T ++I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 5 TWVMMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLL 64
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ ALL ++ Q G +
Sbjct: 65 WWWYLGGAVEKRLGSGKLIVIT-----------LISALLSGYVQ----QKFSGPWFGGLT 109
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 110 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFD-----LFGMSMANGA--- 161
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 162 HIAGLAVGLAMAF 174
>gi|357444041|ref|XP_003592298.1| Rhomboid family member [Medicago truncatula]
gi|355481346|gb|AES62549.1| Rhomboid family member [Medicago truncatula]
Length = 314
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 88/222 (39%), Gaps = 56/222 (25%)
Query: 58 VISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAIL 117
V+ + Q +R +T I H ++H+L NML LV +G LE+ G V++ I +L
Sbjct: 104 VVHQHQEWRLFTCIWLHAGIIHLLSNMLCLVLIGIRLEQQFGFVKIGLIYLL-------- 155
Query: 118 HLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLF-----NI 172
GF G +FS I I S+S S ++FGL +
Sbjct: 156 ------------------------SGFGGSVFSSIFIRNSISVGASSALFGLLGAMISEL 191
Query: 173 PAKWYP--------LILLVLFQV-----LMTNVSLLGHLCGILSGFAYTYGFFNLLMPGT 219
W L LLV+ + L+ V L H+ G++ GF + +L+P
Sbjct: 192 LTNWTIYSNKVMALLTLLVMIAINLTIGLLPRVDNLAHIGGLVVGFLLGF----ILLPRP 247
Query: 220 SFYSAIESS--SLLSTCIRQPKFILCTGGNPSGYIPTYSGQN 259
+ + S + + +L T G G + + G+N
Sbjct: 248 QYDGVLRKSKYNAYQFVLGIVSLVLLTAGLSFGLVMLFRGEN 289
>gi|345301255|ref|YP_004830613.1| Rhomboid protease glpG [Enterobacter asburiae LF7a]
gi|345095192|gb|AEN66828.1| Rhomboid protease glpG [Enterobacter asburiae LF7a]
Length = 276
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 47/87 (54%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
FT ++ C +++I + G S P F V+R++T + H S++H+LFN+
Sbjct: 96 FTLLLMAACILVFIIMNVVGDQSVMIALAWPYDPSLEFDVWRYFTHALMHFSVMHILFNL 155
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
L LG +E+ +GS ++ IT++ A
Sbjct: 156 LWWWYLGGAVEKRLGSGKLIVITLISA 182
>gi|145537169|ref|XP_001454301.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124422056|emb|CAK86904.1| unnamed protein product [Paramecium tetraurelia]
Length = 268
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 105/235 (44%), Gaps = 12/235 (5%)
Query: 19 WESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICF-LPSAVISRFQVYRFYTSIVFHGSL 77
W+SI F T V+I TI I L DS ++I +P+ I + +++R FHG +
Sbjct: 11 WQSITFGTKFVLIT-STICCILDLLTNDSLFDIFVDIPNKTIYQIELWRLLIPQFFHGDI 69
Query: 78 LHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVM 137
++ ++L + E+E+ G++ F+ I N I+ ++ LL + + L+ V+
Sbjct: 70 YNITISLLGFLFCAIEVEKSYGTIP-FFCDIFF--KNLIIQIIYVLLCFSLSYLTLE-VL 125
Query: 138 DECAIGFSGVIFSLIVIETSLSGAQSRSVFGL--FNIPAKWYPLILLVLFQVL-MTNVSL 194
D + GF + F + ++ +LS F F++ +K+YP ++ ++ + L
Sbjct: 126 DTESFGFWNITF-IYMMNKALSDYDEPQKFLCFPFSLQSKYYPPAFFLIMNIIEFPRLDL 184
Query: 195 LGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFILCTGGNPS 249
+ L + GF L G F + IE S + FI C N S
Sbjct: 185 IAAAFFALIEYQLFDGFMMKLSKG--FVTKIEYSFPFKFFQSRQDFITCDQVNHS 237
>gi|401623399|gb|EJS41500.1| rbd2p [Saccharomyces arboricola H-6]
Length = 262
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 91/205 (44%), Gaps = 12/205 (5%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T+ +V+ ++L+ +F ++ P ++ + Q+ R + H SL H+LFN+L
Sbjct: 18 TTGLVVFLTAVFLLSFVFALGD--DLSLAPESLF-KLQMSRLSLYPLIHLSLPHLLFNVL 74
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
A+ + E G+V L A IL+ L+ L+ V A G+
Sbjct: 75 AIWAPLNLFEETHGTVYTGVFLNLSALFAGILYCLLGKLL-------YPGVFVAGASGWC 127
Query: 146 GVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGF 205
+F+ + S ++R +++P + P+ LL+ V++ S GH G+ G+
Sbjct: 128 FTLFAYYSYKESQVRPRTRLFHTEYSVPTLYTPIALLIAIAVIVPGSSFWGHFFGLCVGY 187
Query: 206 A--YTYGFFNLLMPGTSFYSAIESS 228
A Y +F+ + P + IE+S
Sbjct: 188 AIGYKESWFHKITPPGWIITKIENS 212
>gi|223043140|ref|ZP_03613187.1| rhomboid family protein [Staphylococcus capitis SK14]
gi|417907800|ref|ZP_12551567.1| peptidase, S54 family [Staphylococcus capitis VCU116]
gi|222443351|gb|EEE49449.1| rhomboid family protein [Staphylococcus capitis SK14]
gi|341594887|gb|EGS37565.1| peptidase, S54 family [Staphylococcus capitis VCU116]
Length = 487
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 84/194 (43%), Gaps = 29/194 (14%)
Query: 25 FTSA--VVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSL 77
FT A V+I+ I +C++ + F ++ L + F V YR +S+ H +
Sbjct: 156 FTPATYVLIITNVIIWLCMILYLNRFSDVKLLEVGGLVHFNVVHGEWYRLISSMFLHFNF 215
Query: 78 LHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVM 137
H+L NML+L G +E I+GS RM I ++ L + F L
Sbjct: 216 EHILMNMLSLFIFGKIVESIVGSWRMLVI------------YFVSGLFGN--FVSLSFNT 261
Query: 138 DECAIGFSGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSL 194
++G SG IF L I LS R V G L++L+ + M+N+++
Sbjct: 262 STISVGASGAIFGLIGSIFAIMYLSKTFDRKVIG-----QLLIALLILICLSLFMSNINI 316
Query: 195 LGHLCGILSGFAYT 208
+ HL G + G T
Sbjct: 317 MAHLGGFIGGLLIT 330
>gi|153214625|ref|ZP_01949501.1| GlpG protein [Vibrio cholerae 1587]
gi|124115231|gb|EAY34051.1| GlpG protein [Vibrio cholerae 1587]
Length = 180
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 44/79 (55%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
FT ++ +C I+ + D+ + P+ ++Q++R+ + + H S++H+ FN+
Sbjct: 2 FTLFIMALCIIIFTLQTFGAGDAVFNALHFPALAGQQWQIWRWVSHALLHFSVMHIAFNL 61
Query: 85 LALVPLGSELERIMGSVRM 103
L G +LE+ +GSVR+
Sbjct: 62 LWWWQFGGDLEQRLGSVRL 80
>gi|449446051|ref|XP_004140785.1| PREDICTED: inactive rhomboid protein 1-like [Cucumis sativus]
gi|449485528|ref|XP_004157199.1| PREDICTED: inactive rhomboid protein 1-like [Cucumis sativus]
Length = 323
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 74/157 (47%), Gaps = 28/157 (17%)
Query: 56 SAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNA 115
+ V+++ Q +R T I H + H+L NML LV +G+ LE+ G VR+ I ++ +
Sbjct: 104 TKVVNKHQAWRLITCIWLHAGVFHLLANMLCLVFIGTRLEQQFGFVRIGVIYLVSGFGGS 163
Query: 116 ILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNI--- 172
+L L+ + + ++G SG +F L+ GA +F + I
Sbjct: 164 VLSSLL--------------IQNNISVGASGSLFGLL-------GAMLSELFTNWTIYTN 202
Query: 173 PAKWYPLILLVLFQV----LMTNVSLLGHLCGILSGF 205
A +L+++F L+ +V+ H+ G L+GF
Sbjct: 203 KAAALATLLVIIFINFGIGLLPHVNNFAHIGGFLTGF 239
>gi|418952134|ref|ZP_13504176.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-160]
gi|375369792|gb|EHS73653.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-160]
Length = 303
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 85/191 (44%), Gaps = 28/191 (14%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSLLHV 80
T ++ V I+L C++ ++F ++ L + F V YR TS+ H S H+
Sbjct: 99 TYTIIFVNVLIWL-CMILYLNNFSDVKLLDVGGLVHFNVVHGEWYRIVTSMFLHFSFEHI 157
Query: 81 LFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDEC 140
L NML+L G +E I+GS RM + IA L + F L
Sbjct: 158 LMNMLSLFIFGKIVEAIIGSWRMLTVY------------FIAGLFGN--FVSLSFNTTTI 203
Query: 141 AIGFSGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGH 197
++G SG IF L I +S ++ + G I L++LV + M+N++++ H
Sbjct: 204 SVGASGAIFGLIGSIFAMMYVSKTFNKKMLGQLLI-----SLVILVGVSLFMSNINIVAH 258
Query: 198 LCGILSGFAYT 208
+ G + G T
Sbjct: 259 IGGFIGGLLIT 269
>gi|424658007|ref|ZP_18095276.1| rhomboid protease glpG [Vibrio cholerae HE-16]
gi|408056997|gb|EKG91866.1| rhomboid protease glpG [Vibrio cholerae HE-16]
Length = 277
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 47/87 (54%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
FT ++ +C I+ + D + P+ ++Q++R+ + + H S++H+ FN+
Sbjct: 99 FTLFIMALCIIIFTLQTFGAGDVVFNALHFPALAGQQWQIWRWVSHALLHFSVMHIAFNL 158
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
L G +LE+ +GSVR+ + ++ A
Sbjct: 159 LWWWQFGGDLEQRLGSVRLIKLFVVSA 185
>gi|314933721|ref|ZP_07841086.1| rhomboid family protein [Staphylococcus caprae C87]
gi|313653871|gb|EFS17628.1| rhomboid family protein [Staphylococcus caprae C87]
Length = 487
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 84/194 (43%), Gaps = 29/194 (14%)
Query: 25 FTSA--VVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSL 77
FT A V+I+ I +C++ + F ++ L + F V YR +S+ H +
Sbjct: 156 FTPATYVLIITNVIIWLCMILYLNRFSDVKLLEVGGLVHFNVVHGEWYRLISSMFLHFNF 215
Query: 78 LHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVM 137
H+L NML+L G +E I+GS RM I ++ L + F L
Sbjct: 216 EHILMNMLSLFIFGKIVESIVGSWRMLVI------------YFVSGLFGN--FVSLSFNT 261
Query: 138 DECAIGFSGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSL 194
++G SG IF L I LS R V G L++L+ + M+N+++
Sbjct: 262 STISVGASGAIFGLIGSIFAIMYLSKTFDRKVIG-----QLLIALLILICLSLFMSNINI 316
Query: 195 LGHLCGILSGFAYT 208
+ HL G + G T
Sbjct: 317 MAHLGGFIGGLLIT 330
>gi|182627147|ref|ZP_02954861.1| rhomboid family protein [Clostridium perfringens D str. JGS1721]
gi|177907465|gb|EDT70134.1| rhomboid family protein [Clostridium perfringens D str. JGS1721]
Length = 342
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 49/97 (50%), Gaps = 15/97 (15%)
Query: 56 SAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNA 115
+A+I + YR TS+ HG ++H+LFNM AL LG +ERI G+ + Y+ I +
Sbjct: 195 NAIIFHGEYYRLVTSMFLHGGIVHLLFNMYALYILGDFIERIYGAKK--YLAIYFVSG-- 250
Query: 116 ILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLI 152
+VA I VM +G SG IF L+
Sbjct: 251 --------IVASIFSLYFSPVM---GVGASGAIFGLL 276
>gi|126651489|ref|ZP_01723693.1| hypothetical protein BB14905_07394 [Bacillus sp. B14905]
gi|126591742|gb|EAZ85838.1| hypothetical protein BB14905_07394 [Bacillus sp. B14905]
Length = 207
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 72/148 (48%), Gaps = 15/148 (10%)
Query: 58 VISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAIL 117
++ + + +R +++I H +HV FNM +L G ELE+I G R +ITI L +
Sbjct: 51 LVQKGEWWRVFSAIFLHAGFMHVFFNMFSLYLFGPELEKIAGKAR--FITIYLVSG---- 104
Query: 118 HLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWY 177
+V ++ Y + ++G SG IF + +L R++ L +
Sbjct: 105 ------IVGNMATYIFYDS-SYASLGASGAIFGIFGAFGALVYYTRRTMPMLRKLILPII 157
Query: 178 PLILLVLFQVLMTNVSLLGHLCGILSGF 205
+ +++ F L NV++ HL G+++GF
Sbjct: 158 IISVIMTF--LQPNVNVFAHLGGLVTGF 183
>gi|156741085|ref|YP_001431214.1| rhomboid family protein [Roseiflexus castenholzii DSM 13941]
gi|156232413|gb|ABU57196.1| Rhomboid family protein [Roseiflexus castenholzii DSM 13941]
Length = 281
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 43/97 (44%), Gaps = 15/97 (15%)
Query: 56 SAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNA 115
+A+ Q YRF T++ HG L H+ FN AL LG E ER+ G+ R I +L
Sbjct: 94 AAIFVGGQYYRFLTAMFLHGGLAHLFFNSFALYSLGFETERLFGAQRFLAIYMLAGLGGG 153
Query: 116 ILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLI 152
+ Y L ++G SG IF LI
Sbjct: 154 VAS------------YALN---PNPSVGASGAIFGLI 175
>gi|365832927|ref|ZP_09374453.1| hypothetical protein HMPREF1021_03217 [Coprobacillus sp. 3_3_56FAA]
gi|365259760|gb|EHM89743.1| hypothetical protein HMPREF1021_03217 [Coprobacillus sp. 3_3_56FAA]
Length = 214
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 78/157 (49%), Gaps = 12/157 (7%)
Query: 53 FLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLAT 112
F P V++ Q +R ++ H ++H+ N +LV LGS +E ++G R Y+ IL+A+
Sbjct: 44 FNPILVLAGNQYWRLISANFIHFGIMHIFCNCYSLVNLGSVMEYLLGMKR--YLIILIAS 101
Query: 113 SNAILHLLIALLVAHIPFYRLQ-NVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFN 171
+ +A + FY L N G SG IF L+ +L+ LF
Sbjct: 102 A-------LATTILPTVFYILTGNGASSIMGGISGAIFGLMGALLALAWKFKDVYAYLFK 154
Query: 172 IPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYT 208
+ ++L++L +L+ ++SL GH+ G++ GF T
Sbjct: 155 QISS--SVLLMLLISILVPSISLSGHISGMIGGFIAT 189
>gi|300797244|ref|NP_001178756.1| rhomboid domain-containing protein 2 [Rattus norvegicus]
Length = 361
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Query: 54 LPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATS 113
L S + +QVYR T I + + + +L + + ER +G+VR + T++
Sbjct: 50 LRSEALRNWQVYRLVTYIFVYENPISLLCGAIIIWRFAGNFERSVGTVRHCFFTLIFTVF 109
Query: 114 NAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIP 173
+AI++L + + +L V D A GF+ V F+++ + + S + VFG+ +P
Sbjct: 110 SAIIYLSFESVSS---LSKLGEVED--ARGFTPVAFAMLGVTSVRSRMRRALVFGVV-VP 163
Query: 174 AKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAY 207
+ P +LL L+ S L ++ G+L G +Y
Sbjct: 164 SVLVPWLLLCA-SWLIPQTSFLSNVSGLLIGLSY 196
>gi|357128026|ref|XP_003565677.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
At3g17611-like [Brachypodium distachyon]
Length = 322
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 69/148 (46%), Gaps = 20/148 (13%)
Query: 63 QVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMF-YITILLATSNAILHLLI 121
+ RF+ +H + H+L NM +L+ G +LE GS + + LL S LL
Sbjct: 80 DLRRFFFPAFYHANEFHLLQNMTSLLWTGDQLETSXGSFKFASMVASLLGLSKGFTILLS 139
Query: 122 A--LLVAHIPFYRLQNVMDECAIGFSGVIFSLIVI--ETSLSGAQSRSVFGLFNIPAKWY 177
LL+ + Y Q+ IGFSGV+F + V+ ++ G + +VF N
Sbjct: 140 EGFLLLGNDKAYYQQHY-----IGFSGVLFGMDVVLNDSVGEGPEMCAVFLCAN------ 188
Query: 178 PLILLVLFQVLMTNVSLLGHLCGILSGF 205
L+L Q L+ S + HL GIL+G
Sbjct: 189 ----LLLIQDLIPEASFIAHLGGILAGL 212
>gi|167756710|ref|ZP_02428837.1| hypothetical protein CLORAM_02248 [Clostridium ramosum DSM 1402]
gi|374627722|ref|ZP_09700124.1| hypothetical protein HMPREF0978_03444 [Coprobacillus sp.
8_2_54BFAA]
gi|167702885|gb|EDS17464.1| peptidase, S54 family [Clostridium ramosum DSM 1402]
gi|373912961|gb|EHQ44804.1| hypothetical protein HMPREF0978_03444 [Coprobacillus sp.
8_2_54BFAA]
Length = 214
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 78/157 (49%), Gaps = 12/157 (7%)
Query: 53 FLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLAT 112
F P V++ Q +R ++ H ++H+ N +LV LGS +E ++G R Y+ IL+A+
Sbjct: 44 FNPILVLAGNQYWRLISANFIHFGIMHIFCNCYSLVNLGSVMEYLLGMKR--YLIILIAS 101
Query: 113 SNAILHLLIALLVAHIPFYRLQ-NVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFN 171
+ +A + FY L N G SG IF L+ +L+ LF
Sbjct: 102 A-------LATTILPTVFYILTGNGASSIMGGISGAIFGLMGALLALAWKFKDVYAYLFK 154
Query: 172 IPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYT 208
+ ++L++L +L+ ++SL GH+ G++ GF T
Sbjct: 155 QISS--SVLLMLLISILVPSISLSGHISGMIGGFIAT 189
>gi|169617636|ref|XP_001802232.1| hypothetical protein SNOG_12001 [Phaeosphaeria nodorum SN15]
gi|160703443|gb|EAT80413.2| hypothetical protein SNOG_12001 [Phaeosphaeria nodorum SN15]
Length = 174
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 71/166 (42%), Gaps = 33/166 (19%)
Query: 80 VLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDE 139
++FN++AL PL E G++ +T+ L T +P Y ++ +D+
Sbjct: 1 MIFNLIALTPLLERFESEFGTL----VTLALFTGRK-----------GVPGYAWKHEIDD 45
Query: 140 ----CAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLL 195
+ +S I S G + IP PLIL ++ ++ NVSL+
Sbjct: 46 RQHSAQYQVASTRYSRI------------SSVGPYKIPTWTTPLILALVTSFIVPNVSLI 93
Query: 196 GHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFI 241
GHLCG G+ + G+ L+P +E+ L+ R P ++
Sbjct: 94 GHLCGAGIGYLWASGYIKFLVPHEKILRWVETK--LNLLGRLPHYV 137
>gi|334126008|ref|ZP_08499990.1| rhomboid protease GlpG [Enterobacter hormaechei ATCC 49162]
gi|333386037|gb|EGK57258.1| rhomboid protease GlpG [Enterobacter hormaechei ATCC 49162]
Length = 276
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 48/87 (55%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
FT ++ C +++I + G S P +F V+R++T + H S++H+LFN+
Sbjct: 96 FTLLLMAACIIVFIIMSVVGDQSVMIALAWPYDPSLQFDVWRYFTHALMHFSVMHILFNL 155
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
L LG +E+ +GS ++ IT++ A
Sbjct: 156 LWWWYLGGIVEKRLGSGKLIVITLISA 182
>gi|392397021|ref|YP_006433622.1| hypothetical protein Fleli_1398 [Flexibacter litoralis DSM 6794]
gi|390528099|gb|AFM03829.1| putative membrane protein [Flexibacter litoralis DSM 6794]
Length = 308
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 88/207 (42%), Gaps = 15/207 (7%)
Query: 47 SFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRM--F 104
SF E + P ++S Y F S+ +LH+LFNML L G + +GS R
Sbjct: 60 SFEEFIYRPWTLLS----YGFMHSLKGFNGILHILFNMLVLYWFGQIVVSEIGSNRFLGL 115
Query: 105 YITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSR 164
YI +LA A L L+ + +PF+ Q M +G S ++++++ +L
Sbjct: 116 YIWGILAGGVAFL-----LIFSFVPFFAAQKTM--GLVGASAGVYAIVIAAGTLMPNVKM 168
Query: 165 SVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSA 224
++F + + KW + +VL V++ G L+G Y F G +
Sbjct: 169 NLFIIGEVSLKWIAIAYVVLSFVMLAGGDNAGGDIAHLAGAGIGYLFVVQYKKGNDWSKP 228
Query: 225 IES--SSLLSTCIRQPKFILCTGGNPS 249
+ S + + R+PK GG S
Sbjct: 229 VMSFITFFQNIFKRKPKMKAYRGGQSS 255
>gi|239622794|ref|ZP_04665825.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|317483413|ref|ZP_07942404.1| rhomboid family protein [Bifidobacterium sp. 12_1_47BFAA]
gi|239514791|gb|EEQ54658.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|316915168|gb|EFV36599.1| rhomboid family protein [Bifidobacterium sp. 12_1_47BFAA]
Length = 250
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 7/93 (7%)
Query: 17 QWWESIPFFTSAVVIVCGTIYLICLLFGYDS---FYEICFLPSAVISRF--QVYRFYTSI 71
QW P T A+++ C ++L+ +L G+ + + +L A R + + TS+
Sbjct: 12 QWERGGPVMTWALIVACVAVWLLEVLLGFIAPGLRAWLMYLGMAAPVRLVAEPWTLITSM 71
Query: 72 VFHG--SLLHVLFNMLALVPLGSELERIMGSVR 102
H SLLH+LFNM+AL +G LER++G R
Sbjct: 72 FLHAPNSLLHILFNMIALYSVGPVLERMIGHWR 104
>gi|358462907|ref|ZP_09173011.1| Peptidase S54, rhomboid domain protein [Frankia sp. CN3]
gi|357071027|gb|EHI80658.1| Peptidase S54, rhomboid domain protein [Frankia sp. CN3]
Length = 400
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 63 QVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIA 122
+ +R T+ HGS+LH+LFNM AL LG++LE ++G R + A L L++
Sbjct: 232 EYWRLVTAAFLHGSVLHILFNMYALFLLGTQLEAVLGRARYLALFFACAIGGNTLSYLMS 291
>gi|296105116|ref|YP_003615262.1| intramembrane serine protease GlpG [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295059575|gb|ADF64313.1| intramembrane serine protease GlpG [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length = 276
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 47/87 (54%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
FT ++ C +++I + G S P F V+R++T + H S++H+LFN+
Sbjct: 96 FTLLLMAACIIVFIIMNVVGDQSVMIALAWPYDPSLDFDVWRYFTHALMHFSVMHILFNL 155
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
L LG +E+ +GS ++ IT++ A
Sbjct: 156 LWWWYLGGAVEKRLGSGKLIVITLISA 182
>gi|296268056|ref|YP_003650688.1| rhomboid family protein [Thermobispora bispora DSM 43833]
gi|296090843|gb|ADG86795.1| Rhomboid family protein [Thermobispora bispora DSM 43833]
Length = 286
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 65/154 (42%), Gaps = 33/154 (21%)
Query: 65 YRFYTSIVFHG---SLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLI 121
+R TS H S H+LFNM AL +G +LER++GS R + +L A ++ L
Sbjct: 120 WRLITSAFLHAPPPSFWHILFNMWALYVIGPDLERLLGSARFAALYLLSALGGSVAIYLF 179
Query: 122 ALLVAHIPFYRLQNVMDECAIGFSGVIF----SLIVIETSLSGAQSRSVFGLFNIPAKWY 177
+ A+G SG I+ +L V+ L G R V L I
Sbjct: 180 GV----------------AALGASGAIYGLFGALFVVARRL-GTDVRGVLWLIGIN---- 218
Query: 178 PLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGF 211
VL ++ +S GHL G+++G G
Sbjct: 219 -----VLITFVVPGISWQGHLGGLVTGTVVAAGL 247
>gi|400293315|ref|ZP_10795191.1| peptidase, S54 family [Actinomyces naeslundii str. Howell 279]
gi|399901556|gb|EJN84435.1| peptidase, S54 family [Actinomyces naeslundii str. Howell 279]
Length = 285
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 65/154 (42%), Gaps = 20/154 (12%)
Query: 53 FLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITIL--L 110
F P+A S + +RF T+ H + +H+ FNM AL LG LE ++G R + +L L
Sbjct: 109 FFPAAAAS--EPWRFLTTAFLHANYMHLGFNMWALWVLGGALEPVLGRWRFTAVYLLSAL 166
Query: 111 ATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLF 170
S AI L + +G SG +F L + R G+
Sbjct: 167 GGSTAIYWL----------SWPETEAWTTLTVGASGAVFGLFSTMFVVQRRFGRDTSGIV 216
Query: 171 NIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSG 204
+ L++ + L N+S GHL G++ G
Sbjct: 217 AL------LVINGVVSFLGANISWQGHLGGLIVG 244
>gi|410867339|ref|YP_006981950.1| Peptidase, S54 family protein [Propionibacterium acidipropionici
ATCC 4875]
gi|410823980|gb|AFV90595.1| Peptidase, S54 family protein [Propionibacterium acidipropionici
ATCC 4875]
Length = 229
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 77/167 (46%), Gaps = 25/167 (14%)
Query: 56 SAVISRFQVYRFYTSIVFHGS-LLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSN 114
SA + + +RF TS H + + H+ FNM AL LG LER +G R +L A +
Sbjct: 40 SAAAGKTEPWRFLTSAFAHSTNITHIGFNMFALWSLGRVLERFLGRGRFLATYLLSALAG 99
Query: 115 AILHLLIALLV----AHIPFYRLQNVMDECAIGFSGVIF----SLIVIETSLSGAQSRSV 166
L +++A A IP + + +G SG IF +L+V++ L G+ +RS+
Sbjct: 100 GALFVVMAAGTEYGSAVIPGWY------DGVVGASGAIFGLFGTLLVVQRRLGGS-TRSL 152
Query: 167 FGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFN 213
W LIL V + +++ H+ G + G A FF
Sbjct: 153 ---------WMVLILNVALVFFIPDIAWQAHVGGFIVGAACGVIFFE 190
>gi|237732716|ref|ZP_04563197.1| predicted protein [Mollicutes bacterium D7]
gi|229384211|gb|EEO34302.1| predicted protein [Coprobacillus sp. D7]
Length = 209
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 84/164 (51%), Gaps = 14/164 (8%)
Query: 53 FLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLAT 112
F P V++ Q +R ++ H ++H+ N +LV LGS +E ++G R Y+ IL+A+
Sbjct: 44 FNPILVLAGNQYWRLISANFIHFGIMHIFCNCYSLVNLGSVMEYLLGMKR--YLIILIAS 101
Query: 113 SNAILHLLIALLVAHIPFYRLQ-NVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFG-LF 170
+ +A + FY L N G SG IF L+ +L+ + + V+ LF
Sbjct: 102 A-------LATTILPTVFYILTGNGASSIMGGISGAIFGLMGALLALA-WKFKDVYAYLF 153
Query: 171 NIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNL 214
+ ++L++L +L+ ++SL GH+ G++ GF T NL
Sbjct: 154 KQISS--SVLLMLLISILVPSISLSGHISGMIGGFIATLLIINL 195
>gi|423116733|ref|ZP_17104424.1| rhomboid protease glpG [Klebsiella oxytoca 10-5245]
gi|376377701|gb|EHS90469.1| rhomboid protease glpG [Klebsiella oxytoca 10-5245]
Length = 276
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 48/86 (55%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T +V+ C ++++ + G + P +F+V+R+++ + H SL+H+LFN+L
Sbjct: 97 TWSVLFACIAVFVLQSVIGDQPVMMLLAWPYDPSLKFEVWRYFSHALMHFSLMHILFNLL 156
Query: 86 ALVPLGSELERIMGSVRMFYITILLA 111
LG +E+ +GS ++ IT + A
Sbjct: 157 WWWYLGGAVEKRIGSGKLVVITAIGA 182
>gi|28572184|ref|NP_788964.1| integral membrane protein [Tropheryma whipplei TW08/27]
gi|28410315|emb|CAD66701.1| putative integral membrane protein [Tropheryma whipplei TW08/27]
Length = 207
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 86/195 (44%), Gaps = 30/195 (15%)
Query: 20 ESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVI-SRFQVYRFYTSIVFHGSL- 77
+ P T+ ++ +C ++L+ +L G + F + V Q +R +TS+ H +
Sbjct: 8 RAYPPATATIITLCIFLWLLQMLLGSGVTTSLAFAGAYVFPDSLQPWRIFTSMFLHSTFT 67
Query: 78 -LHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNV 136
LH+LFNM +L LGS LE+ +GS R + I+ L A + LQ
Sbjct: 68 PLHLLFNMYSLWWLGSNLEQRIGSWRFLALY------------FISGLGAAVGIVYLQP- 114
Query: 137 MDECAIGFSGVIFSLIV--IETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSL 194
+ +G SG IF L+ I + Q + GL N+ + L+ VS
Sbjct: 115 YNTLTLGASGGIFGLLAAFIVLRIDSGQLWGIVGL-NL-----------IISFLLPGVSW 162
Query: 195 LGHLCGILSGFAYTY 209
H+ G+LSGF +
Sbjct: 163 QAHIGGLLSGFVAAW 177
>gi|260771647|ref|ZP_05880567.1| protein GlpG [Vibrio metschnikovii CIP 69.14]
gi|260613424|gb|EEX38623.1| protein GlpG [Vibrio metschnikovii CIP 69.14]
Length = 279
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 50/87 (57%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T V++VC I+++ L + P+ ++Q++R+++ + H S++H+ FN+L
Sbjct: 100 TLLVMMVCIGIFVLQQLGLARQVFAALHFPAFAGQQWQLWRWFSHALLHFSIMHIAFNLL 159
Query: 86 ALVPLGSELERIMGSVRMFYITILLAT 112
LG ++E+ +GS+++ + ++ A
Sbjct: 160 WWWQLGGDIEKRLGSLKLTQLALIAAA 186
>gi|106364398|dbj|BAE95224.1| hypothetical conserved protein [unclutured Candidatus Nitrosocaldus
sp.]
Length = 183
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 68 YTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAH 127
+TS+ H +++H+ FNMLALV LG +E +GS+R I IL S LH + +L +
Sbjct: 47 FTSMFLHANIVHIAFNMLALVALGRVIEDAIGSMRYIIIYILSGLSGVALHTIYSLTTS- 105
Query: 128 IPFYRLQNVMDECAIGFSGVIFSLIVIETSL 158
N + +G SG I +I + ++
Sbjct: 106 -------NGFNTPVVGASGAISGIIGLAAAM 129
>gi|401765605|ref|YP_006580612.1| intramembrane serine protease GlpG [Enterobacter cloacae subsp.
cloacae ENHKU01]
gi|400177139|gb|AFP71988.1| intramembrane serine protease GlpG [Enterobacter cloacae subsp.
cloacae ENHKU01]
Length = 276
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 47/87 (54%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
FT ++ C +++I + G S P F V+R++T + H S++H+LFN+
Sbjct: 96 FTLLLMAACIIVFIIMNVVGDQSVMIALAWPYDPSLEFDVWRYFTHALMHFSVMHILFNL 155
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
L LG +E+ +GS ++ IT++ A
Sbjct: 156 LWWWYLGGIVEKRLGSGKLIVITVISA 182
>gi|41584|emb|CAA30398.1| unnamed protein product [Escherichia coli K-12]
gi|146193|gb|AAA23890.1| glpG [Escherichia coli]
Length = 276
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 83/193 (43%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T ++I C +++ + G P +F+ +R++T + H SL+H+LFN+L
Sbjct: 97 TWVMMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLL 156
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ ++ + ALL ++ Q G S
Sbjct: 157 WWWYLGGAVEKRLGSGKLI-----------VIRSISALLSGYVQ----QKFTGPWFGGLS 201
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 202 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFD-----LFGMSMANGA--- 253
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 254 HIAGLAVGLAMAF 266
>gi|451343563|ref|ZP_21912634.1| hypothetical protein HMPREF9943_00859 [Eggerthia catenaformis OT
569 = DSM 20559]
gi|449337660|gb|EMD16817.1| hypothetical protein HMPREF9943_00859 [Eggerthia catenaformis OT
569 = DSM 20559]
Length = 202
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 77/158 (48%), Gaps = 17/158 (10%)
Query: 55 PSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSN 114
P V Q YR T+ H +LH+ NM A+ LG +ERI + + L ++N
Sbjct: 51 PIYVHDYHQYYRLITANFIHFGILHLAVNMSAIYNLGIFVERIFQKKMIIVAFVSLLSTN 110
Query: 115 AILHLLIALLVAHIPFYRLQNVMDECAI--GFSGVIFSLIVIETSLSGAQSRSVFGLFNI 172
+ +LL L N + + G SG+IF LI +L+ + +++F +I
Sbjct: 111 FLPYLL-----------YLYNGFGKLTVSGGISGLIFGLIGALAALALLK-KNIFS--DI 156
Query: 173 PAKWYP-LILLVLFQVLMTNVSLLGHLCGILSGFAYTY 209
P LI ++L +++ N+SL GH+CG + GF +Y
Sbjct: 157 FKSLLPNLIAMILISIIVPNISLSGHICGFIGGFFSSY 194
>gi|404484163|ref|ZP_11019377.1| hypothetical protein HMPREF1135_02437 [Clostridiales bacterium
OBRC5-5]
gi|404342843|gb|EJZ69213.1| hypothetical protein HMPREF1135_02437 [Clostridiales bacterium
OBRC5-5]
Length = 209
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 14/96 (14%)
Query: 59 ISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILH 118
I + YR TS+ H + H++ NML LV LG +LE I+G VR F I +L
Sbjct: 49 IKNGEYYRLVTSMFMHFGIEHIVNNMLILVLLGGKLEDILGHVRFFIIYMLSG------- 101
Query: 119 LLIALLVAHIPFYRLQNVMDECAI--GFSGVIFSLI 152
++A+I QN + A+ G SG IF ++
Sbjct: 102 -----ILANIGSDWFQNYTGDVAVSAGASGAIFGIV 132
>gi|326532882|dbj|BAJ89286.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 325
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 30/167 (17%)
Query: 58 VISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAIL 117
V+ Q +R T I H ++H+L NML+LV +G LE+ G VR+ I ++ +++
Sbjct: 107 VVHEQQGWRLVTCIWLHAGVVHLLANMLSLVLVGLRLEQQFGFVRVGVIYLVSGVGGSVM 166
Query: 118 HLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWY 177
L + D ++G SG +F L+ GA +F + I
Sbjct: 167 SSLF--------------IRDNISVGASGALFGLL-------GAMLSELFTNWTIYTNKA 205
Query: 178 PLILLVLFQV-------LMTNVSLLGHLCGILSGFAYTYGFFNLLMP 217
++ +LF + ++ +V H+ G L+GF GF L+ P
Sbjct: 206 AALVTLLFVIAVNLAIGILPHVDNFAHIGGFLTGF--LLGFVLLMRP 250
>gi|404443258|ref|ZP_11008430.1| rhomboid family protein [Mycobacterium vaccae ATCC 25954]
gi|403655930|gb|EJZ10759.1| rhomboid family protein [Mycobacterium vaccae ATCC 25954]
Length = 289
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 23/146 (15%)
Query: 63 QVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIA 122
++YR TS H S+ H+ FNMLAL +G LE +G +R + +L A ++L L+
Sbjct: 115 ELYRLVTSAFLHFSVTHIAFNMLALYFVGPPLEHALGRLRFVALYLLSALGGSVLVYLL- 173
Query: 123 LLVAHIPFYRLQNVMDECAIGFSGVIFSL----IVIETSLSGAQSRSVFGLFNIPAKWYP 178
+ G SG +F L V+ L+ RSV + + +
Sbjct: 174 -------------TFNALTAGASGAVFGLFGATFVVGRKLN-MDVRSVLAIIGLNLAFTF 219
Query: 179 LILLVLFQVLMTNVSLLGHLCGILSG 204
LI L Q N+S GH+ G+++G
Sbjct: 220 LIPLFTSQ----NISWQGHIGGLVTG 241
>gi|336472615|gb|EGO60775.1| hypothetical protein NEUTE1DRAFT_76205 [Neurospora tetrasperma FGSC
2508]
gi|350294152|gb|EGZ75237.1| rhomboid-domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 550
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 24 FFTSAVVIVCGTIYLICLLFGY-DSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLF 82
+ +A + C T+ +C G + +Y +V Q +RF T + H ++H+ F
Sbjct: 241 YDVNASTMKC-TLSDLCGFGGVPEPWYNATATMESVPEPNQWWRFITPMFLHAGVIHIGF 299
Query: 83 NMLALVPLGSELERIMGSVRMFYITI 108
NML + +G E+ER +GS+R F + +
Sbjct: 300 NMLLQMTIGKEMERSIGSIRFFIVYV 325
>gi|15613080|ref|NP_241383.1| hypothetical protein BH0517 [Bacillus halodurans C-125]
gi|10173130|dbj|BAB04236.1| BH0517 [Bacillus halodurans C-125]
Length = 248
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 83/191 (43%), Gaps = 21/191 (10%)
Query: 20 ESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLH 79
S P T+ V I I LL G Y + +S+ + +R T + H S+ H
Sbjct: 13 RSYPIITALVFIHIALFVWIHLLPGGAWVYATGVGFNLAVSQGEYWRLITPVFLHVSIGH 72
Query: 80 VLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDE 139
++FN ALV G LER++G + ++ +L +A++ Y L +
Sbjct: 73 LVFNSFALVIFGPALERMLGKGKFLFVYLLSG------------FIANVATYYLGGLAYP 120
Query: 140 CAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMT----NVSLL 195
+G SG IF L I + + + PA +I +++ ++MT N+++
Sbjct: 121 YHLGASGAIFGLFGIFVYMVIYRKDLI-----DPANTQLVITIIIIGLVMTFLSSNINVF 175
Query: 196 GHLCGILSGFA 206
HL G++ G A
Sbjct: 176 AHLFGMIGGAA 186
>gi|389637524|ref|XP_003716397.1| rhomboid protein 2 [Magnaporthe oryzae 70-15]
gi|351642216|gb|EHA50078.1| rhomboid protein 2 [Magnaporthe oryzae 70-15]
gi|440466881|gb|ELQ36124.1| rhomboid protein 2 [Magnaporthe oryzae Y34]
gi|440479872|gb|ELQ60609.1| rhomboid protein 2 [Magnaporthe oryzae P131]
Length = 262
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 79/182 (43%), Gaps = 17/182 (9%)
Query: 64 VYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMG---SVRMFYITILLATSNAILHLL 120
+YR T H + H L N++A++PL E G S+ +F+ +T AI ++L
Sbjct: 57 MYRTNTYPFIHVNFFHALMNVIAIIPLLERFEAEYGTLTSLALFFGP--FSTIPAIAYVL 114
Query: 121 IALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLS-GAQSRSVFGLFNIPAKWYPL 179
I + + +G S +F L+ +E + V ++P PL
Sbjct: 115 IERGILR---------ANNTVMGASIWVFLLLGMEAIRTYKTNPHLVIATHHVPTWTTPL 165
Query: 180 ILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPK 239
L ++ L+ + +LLGHLCG+ G+ G+ L P IE+ L+ R P
Sbjct: 166 ALCLVVSALVPSTTLLGHLCGLAVGYLSGLGYLKFLSPPEKILRWIETK--LNLLGRLPH 223
Query: 240 FI 241
++
Sbjct: 224 YV 225
>gi|18310434|ref|NP_562368.1| rhomboid family protein [Clostridium perfringens str. 13]
gi|18145114|dbj|BAB81158.1| conserved hypothetical protein [Clostridium perfringens str. 13]
Length = 342
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 49/97 (50%), Gaps = 15/97 (15%)
Query: 56 SAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNA 115
+A+I + YR TS+ HG ++H+LFNM AL LG +ERI G+ + Y+ I +
Sbjct: 195 NAIIFHGEYYRLVTSMFLHGGIVHLLFNMYALYILGDFIERIYGAKK--YLAIYFVSG-- 250
Query: 116 ILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLI 152
+VA I VM +G SG IF L+
Sbjct: 251 --------IVASIFSLYFSPVM---GVGASGAIFGLL 276
>gi|239989111|ref|ZP_04709775.1| hypothetical protein SrosN1_17547 [Streptomyces roseosporus NRRL
11379]
gi|291446112|ref|ZP_06585502.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
gi|291349059|gb|EFE75963.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
Length = 300
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 13/93 (13%)
Query: 59 ISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILH 118
++ Q YR TS+ H L+H+ FNML L LG +LE +G R + +L + + L
Sbjct: 132 VAEGQWYRLVTSMFLHQELMHIGFNMLGLWWLGGQLEAALGRSRYLALYLLSGFAGSALT 191
Query: 119 LLIALLVAHIPFYRLQNVMDECAIGFSGVIFSL 151
LIA ++ ++G SG ++ L
Sbjct: 192 YLIA-------------AQNQPSLGASGAVYGL 211
>gi|422427046|ref|ZP_16503964.1| peptidase, S54 family protein [Propionibacterium acnes HL087PA1]
gi|422453079|ref|ZP_16529775.1| peptidase, S54 family protein [Propionibacterium acnes HL087PA3]
gi|327454557|gb|EGF01212.1| peptidase, S54 family protein [Propionibacterium acnes HL087PA3]
gi|328755612|gb|EGF69228.1| peptidase, S54 family protein [Propionibacterium acnes HL087PA1]
Length = 222
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 70/143 (48%), Gaps = 10/143 (6%)
Query: 65 YRFYTSIVFHG-SLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIAL 123
+RF TS+ H S+ H+ FNM AL LG LE +G R+ ++ L L+A
Sbjct: 47 WRFVTSMFGHALSIFHIGFNMYALWALGRSLEPFLGRARLLAAYLMSGLGGGALFCLMA- 105
Query: 124 LVAHIPFYRLQNVMDECAIGFSGVIFS----LIVIETSLSGAQSRSVFGLFNIPAKWYPL 179
A L NV D+ +G SG IF L++++ L GA +R ++ + I A
Sbjct: 106 -TADGGRAILPNV-DDGVVGASGAIFGLFGVLLIVQRRL-GASTRELWVVLAINAALLLF 162
Query: 180 ILLVLFQVLMTNVSLLGHLCGIL 202
I + +Q + L+G +CG++
Sbjct: 163 ISGIAWQAHLGGF-LVGMMCGVI 184
>gi|269793370|ref|YP_003312825.1| hypothetical protein Sked_00140 [Sanguibacter keddieii DSM 10542]
gi|269095555|gb|ACZ19991.1| uncharacterized membrane protein [Sanguibacter keddieii DSM 10542]
Length = 286
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 84/187 (44%), Gaps = 24/187 (12%)
Query: 23 PFFTSAVVIVCGTIYLICLLFGYDSFY-EICFLPSAVISRFQVYRFYTSIVFHG-SLLHV 80
P T ++ +C Y++ L G+ + + F P+ + + +RF T+ H S H+
Sbjct: 78 PVVTWTIIGLCLASYVLQLAMGWGGWTSRLAFSPA--LGEIEPWRFVTAAFVHSTSFFHI 135
Query: 81 LFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDEC 140
NM AL +G LE ++G VR + +L A + +L+A F
Sbjct: 136 ALNMYALWIVGPYLENLLGRVRFTALYLLSAIGGQVAVVLLADPSGASWF--------TG 187
Query: 141 AIGFSGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGH 197
+G SG +F L I + G ++R + + L L+V F ++ N+S GH
Sbjct: 188 TVGASGAVFGLFGAIFVVMRKMGQEARGMLVIIG-------LNLVVGF--VVPNISWQGH 238
Query: 198 LCGILSG 204
L G+++G
Sbjct: 239 LGGLVTG 245
>gi|308162538|gb|EFO64925.1| Hypothetical protein GLP15_813 [Giardia lamblia P15]
Length = 286
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 92/202 (45%), Gaps = 22/202 (10%)
Query: 5 IVSEAGLSTRANQWWESIPFFT---SAVVIVCGTIYLICLLFGYDSFYEICFL------- 54
+V++ S +W+++P T A+V++C + I + Y F CFL
Sbjct: 1 MVAQGSCSLCCGLFWKTVPPLTIAIPAIVLLCSIAFFITCMSMYIQFQ--CFLMDYTALM 58
Query: 55 PSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSN 114
P A+ + V+R TS + +L LF +++ VP LE+ +GS+R + L T
Sbjct: 59 PGAIFLQGHVWRIVTSHLIPATLWQTLFIIMSFVPPAFILEKKIGSLRFVGLLALCMTFT 118
Query: 115 AILHLLIALLVAHIP------FYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSV-F 167
+++ IA + + P +++ Q S ++F+LI S + R++ F
Sbjct: 119 SLMTSTIAAFLYYTPGINKWSYFKAQWFSTSDLGPTSLLLFTLIC---STRAFRQRTLPF 175
Query: 168 GLFNIPAKWYPLILLVLFQVLM 189
IP+ Y LI V Q++M
Sbjct: 176 CFCQIPSWAYILITYVFAQLMM 197
>gi|28492976|ref|NP_787137.1| hypothetical protein TWT009 [Tropheryma whipplei str. Twist]
gi|28476016|gb|AAO44106.1| unknown [Tropheryma whipplei str. Twist]
Length = 212
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 86/197 (43%), Gaps = 34/197 (17%)
Query: 20 ESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVI-SRFQVYRFYTSIVFHGSL- 77
+ P T+ ++ +C ++L+ +L G + F + V Q +R +TS+ H +
Sbjct: 13 RAYPPATATIITLCIFLWLLQMLLGSGVTTSLAFAGAYVFPDSLQPWRIFTSMFLHSTFT 72
Query: 78 -LHVLFNMLALVPLGSELERIMGSVRMFYITIL--LATSNAILHLLIALLVAHIPFYRLQ 134
LH+LFNM +L LGS LE+ +GS R + + L + I++L
Sbjct: 73 PLHLLFNMYSLWWLGSNLEQRIGSWRFLALYFISGLGAAVGIVYL--------------- 117
Query: 135 NVMDECAIGFSGVIFSLIV--IETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNV 192
+ +G SG IF L+ I + Q + GL N+ + L+ V
Sbjct: 118 QPYNTLTLGASGGIFGLLAAFIVLRIDSGQLWGIVGL-NL-----------IISFLLPGV 165
Query: 193 SLLGHLCGILSGFAYTY 209
S H+ G+LSGF +
Sbjct: 166 SWQAHIGGLLSGFVAAW 182
>gi|356575935|ref|XP_003556091.1| PREDICTED: inactive rhomboid protein 1-like isoform 2 [Glycine max]
Length = 282
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 14/95 (14%)
Query: 58 VISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAIL 117
V++R Q +R +T I H ++H+L NML+LV +G LE+ G +++ I ++ ++L
Sbjct: 110 VVNRHQGWRLFTCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFIKIGIIYLVSGFGGSVL 169
Query: 118 HLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLI 152
L + D ++G SG +F L+
Sbjct: 170 SSLF--------------IRDHISVGASGALFGLL 190
>gi|15639966|ref|NP_219419.1| glpG protein, [Treponema pallidum subsp. pallidum str. Nichols]
gi|189026205|ref|YP_001933977.1| protein GlpG [Treponema pallidum subsp. pallidum SS14]
gi|338706929|ref|YP_004673697.1| rhomboid family protein [Treponema paraluiscuniculi Cuniculi A]
gi|378974570|ref|YP_005223178.1| rhomboid family protein [Treponema pallidum subsp. pertenue str.
Gauthier]
gi|378975627|ref|YP_005224237.1| rhomboid family protein [Treponema pallidum subsp. pallidum DAL-1]
gi|378982479|ref|YP_005230786.1| rhomboid family protein [Treponema pallidum subsp. pertenue str.
CDC2]
gi|408502828|ref|YP_006870272.1| rhomboid family protein [Treponema pallidum subsp. pallidum str.
Mexico A]
gi|3323304|gb|AAC65937.1| glpG protein, putative [Treponema pallidum subsp. pallidum str.
Nichols]
gi|189018780|gb|ACD71398.1| possible protein GlpG [Treponema pallidum subsp. pallidum SS14]
gi|335344990|gb|AEH40906.1| rhomboid family protein [Treponema paraluiscuniculi Cuniculi A]
gi|374678898|gb|AEZ59190.1| rhomboid family protein [Treponema pallidum subsp. pertenue str.
CDC2]
gi|374679967|gb|AEZ60258.1| rhomboid family protein [Treponema pallidum subsp. pertenue str.
Gauthier]
gi|374681027|gb|AEZ61317.1| rhomboid family protein [Treponema pallidum subsp. pallidum DAL-1]
gi|408476191|gb|AFU66956.1| rhomboid family protein [Treponema pallidum subsp. pallidum str.
Mexico A]
Length = 208
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 20/189 (10%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T ++V+ G +++I L Y + +P V ++ +T H + H+LFNML
Sbjct: 16 TLSLVLANGAVFVITSLVESLGIY-LALVPGLVRYHRMYWQIFTYQFVHSGVWHLLFNML 74
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LV G +E+ MGS M +L+ T Y ++ +G S
Sbjct: 75 GLVFFGQTIEKKMGSSEMLLFYLLVGTLCG---------AGACAAYLCVGRLNVLLLGAS 125
Query: 146 GVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILL--VLFQVL-----MTNVSLLGHL 198
G IF+++ + + + ++G+ IPA PL+++ +LF++ NVS L HL
Sbjct: 126 GSIFAILFLFSVMFPTALIYLWGVIPIPA---PLLIVGYILFEIFDLFFSRDNVSHLTHL 182
Query: 199 CGILSGFAY 207
G+L + Y
Sbjct: 183 LGVLFAWGY 191
>gi|348676108|gb|EGZ15926.1| hypothetical protein PHYSODRAFT_459480 [Phytophthora sojae]
Length = 244
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 76/156 (48%), Gaps = 13/156 (8%)
Query: 55 PSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSN 114
P V++ ++ + S H LH+ ++L+ + G +LE +GS+ + + L
Sbjct: 50 PGKVVANKEIAAVFISPFIHWEDLHLYQSILSFLWKGYKLEGRLGSIGFCVLLVYLIV-- 107
Query: 115 AILHLLIALLV--AHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNI 172
L AL+V AH+ + M EC GFSGV+ ++ VI S A ++ F +
Sbjct: 108 ----LTQALIVAGAHVISW---GAMQECITGFSGVLTAIKVILNVNSPAFTK--LYSFKV 158
Query: 173 PAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYT 208
P K+ + LV+ +L+ + +L G+++G+ Y
Sbjct: 159 PTKYAAWLELVITYLLVPKLPILAQAAGLIAGYVYV 194
>gi|254566099|ref|XP_002490160.1| Possible rhomboid protease, has similarity to eukaryotic rhomboid
proteases including Pcp1p [Komagataella pastoris GS115]
gi|238029956|emb|CAY67879.1| Possible rhomboid protease, has similarity to eukaryotic rhomboid
proteases including Pcp1p [Komagataella pastoris GS115]
gi|328350561|emb|CCA36961.1| rhomboid family protein [Komagataella pastoris CBS 7435]
Length = 258
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 72/155 (46%), Gaps = 10/155 (6%)
Query: 74 HGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRL 133
H S LH+ FN+ AL+ S ER G+V + +LA A+ + ++ ++ F+
Sbjct: 72 HSSFLHLFFNIFALISPLSLYERSNGTVHTGVVLNVLAVVTALPYCVLGMV-----FFPK 126
Query: 134 QNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVS 193
+V+ A FS F SLS + + IP P ILLV ++ S
Sbjct: 127 VSVVGASAWCFS--FFGYYSYLQSLSYPTFK--VQDYEIPTIATPFILLVASALIFPGSS 182
Query: 194 LLGHLCGILSGFAYTYGFFN-LLMPGTSFYSAIES 227
+GHL G+LSGFA G+ L+ P + S +E
Sbjct: 183 FIGHLLGLLSGFALAKGYLKPLIEPSSKVISWLEE 217
>gi|449452364|ref|XP_004143929.1| PREDICTED: inactive rhomboid protein 1-like [Cucumis sativus]
gi|449495860|ref|XP_004159966.1| PREDICTED: inactive rhomboid protein 1-like [Cucumis sativus]
Length = 327
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 94/226 (41%), Gaps = 45/226 (19%)
Query: 56 SAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNA 115
+ V+ Q +R + I H ++H+L NML+LV +G LE+ G VR+ I ++ +
Sbjct: 108 NKVVHEHQGWRLLSCIWLHAGIIHLLANMLSLVLIGIRLEQQFGFVRIGMIYLVAGVGGS 167
Query: 116 ILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLF----N 171
++ L + + ++G SG +F L+ GA + + N
Sbjct: 168 VMSSLF--------------IQNNISVGASGALFGLL-------GAMLSELLTNWTIYTN 206
Query: 172 IPAKWYPLILLVLFQV---LMTNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESS 228
A + LI++V+ + ++ +V H+ G L+GF GF L+ P + E
Sbjct: 207 KVAALFTLIVIVVINLAVGILPHVDNFAHIGGFLTGF--LLGFVLLVRPQ---FKWTERH 261
Query: 229 SLLSTCIRQPKF------------ILCTGGNPSGYIPTYSGQNTSS 262
L R PK+ IL G G + + G+N +
Sbjct: 262 HLPPGARRVPKYKTYQYILWLAAAILLVAGFTLGLVMLFRGENGNK 307
>gi|290473227|ref|YP_003466092.1| hypothetical protein XBJ1_0141 [Xenorhabdus bovienii SS-2004]
gi|289172525|emb|CBJ79292.1| putative membrane protein, member of glp regulon [Xenorhabdus
bovienii SS-2004]
Length = 277
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 82/185 (44%), Gaps = 23/185 (12%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
T +V +C +YL + G P+ +++R+ + + H SL H+LFN+
Sbjct: 99 LTISVTALCILVYLWMQVAGDSDVMRWLAWPNGE-QYLELWRWVSPALLHFSLTHLLFNL 157
Query: 85 LALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGF 144
LGS++ER MG+ ++F ITI+ A L + +H G
Sbjct: 158 ALWWYLGSQVERHMGAGKLFEITIVSAVFTDWAQSLFS--GSHFG-------------GL 202
Query: 145 SGVIFSLI---VIETSLSGAQSRSV-FGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCG 200
SGV+++LI + +S + SV GL I W +L+ F + N++ H G
Sbjct: 203 SGVVYALISYVWLTGEMSPKRGISVPRGLIAISVIW---LLVGYFDMFSLNIANAAHFSG 259
Query: 201 ILSGF 205
++ G
Sbjct: 260 LIIGL 264
>gi|440300205|gb|ELP92694.1| rhomboid protein, putative [Entamoeba invadens IP1]
Length = 248
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 15/142 (10%)
Query: 74 HGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRL 133
H ++LH++ N +AL G +E +G+V+ + I+ N + L A +
Sbjct: 69 HANILHIVMNSMALFGFGCTVEYRIGTVKFIVLFIVSLVFNPVFILSAA---------SI 119
Query: 134 QNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVS 193
+ + +G SG +F+L+V+E + + +++I I+ +LFQ+ VS
Sbjct: 120 GLIYNTDVVGMSGFLFTLMVVEYY---KEDGYIDIIYSITINIVIYIIGILFQM---PVS 173
Query: 194 LLGHLCGILSGFAYTYGFFNLL 215
L GH GIL GF YT GF + L
Sbjct: 174 LAGHFSGILVGFLYTRGFLDFL 195
>gi|421786009|ref|ZP_16222428.1| rhomboid protease glpG [Serratia plymuthica A30]
gi|407751853|gb|EKF62017.1| rhomboid protease glpG [Serratia plymuthica A30]
Length = 278
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 45/87 (51%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
T V+++C +Y++ G D+ P Q++R+ + H SLLH+ FN+
Sbjct: 97 LTLGVMVLCIAVYILMQAMGDDTVMYWLSWPQDSSQYPQLWRWVSHAFLHFSLLHIAFNL 156
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
L LG LE+ +G+ ++F + ++ A
Sbjct: 157 LWWWYLGGPLEKRLGTGKLFVLAVVSA 183
>gi|270264459|ref|ZP_06192725.1| hypothetical protein SOD_h01260 [Serratia odorifera 4Rx13]
gi|270041595|gb|EFA14693.1| hypothetical protein SOD_h01260 [Serratia odorifera 4Rx13]
Length = 278
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 45/87 (51%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
T V+++C +Y++ G D+ P Q++R+ + H SLLH+ FN+
Sbjct: 97 LTLGVMVLCIAVYILMQAMGDDTVMYWLSWPQDSSQYPQLWRWVSHAFLHFSLLHIAFNL 156
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
L LG LE+ +G+ ++F + ++ A
Sbjct: 157 LWWWYLGGPLEKRLGTGKLFVLAVVSA 183
>gi|328768388|gb|EGF78434.1| hypothetical protein BATDEDRAFT_90374 [Batrachochytrium
dendrobatidis JAM81]
Length = 351
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 99/234 (42%), Gaps = 17/234 (7%)
Query: 20 ESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQV--YRFYTSIVFHGSL 77
++IP T ++ V ++++ +L G C +P+ V R + + H +
Sbjct: 17 KAIPLGTLIIIGVSLLLFIVNMLSGGAVTGAWCLVPTNYTYSPVVGLPRLFGYGLVHSGI 76
Query: 78 LHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHI-PFYRLQNV 136
+H + M+A + LE +G++ Y+ +L L+ + + + I P + L V
Sbjct: 77 VHFIVAMVAFPLATATLEFSIGTLPFLYLFSILGMLTGFLYCFVIWVFSFIWPSWGLYPV 136
Query: 137 MDECAIGFSGVIFSLIVIETSLSGAQSRSVFGL-----FNIPAKWYPLILLVLFQVLMTN 191
G F+ + IET R +F +P +PL +V+F +++
Sbjct: 137 N-----GMDIPFFTFLTIET----LSKRGIFKFASEAGVQLPEILFPLPFVVVFLIILPY 187
Query: 192 VSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFILCTG 245
S + HLC + G Y G F +M + +E+S + + + +P F+ G
Sbjct: 188 SSWISHLCAMSIGILYFLGVFETIMITNARTHTLETSGMFAWFVSRPGFVSAPG 241
>gi|111226097|ref|YP_716891.1| hypothetical protein FRAAL6764 [Frankia alni ACN14a]
gi|111153629|emb|CAJ65387.1| Hypothetical protein; putative membrane protein [Frankia alni
ACN14a]
Length = 252
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 67/163 (41%), Gaps = 30/163 (18%)
Query: 46 DSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFY 105
D F I F + + Q YR T+ H +LH+LFNM AL LG +LE I+G R
Sbjct: 75 DDFAMIGF---RIAADDQYYRLLTAAFLHAGVLHILFNMYALYLLGFQLEAILGRARY-- 129
Query: 106 ITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLI----VIETSLSGA 161
L L +A V L + ++G S IF+ VI L
Sbjct: 130 -----------LGLFVAGAVGGNTLSYLLGGLSTASVGASTAIFAFFAAYYVIARRLR-V 177
Query: 162 QSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSG 204
SR + + I LL+ F +N+ GHL G+ +G
Sbjct: 178 DSRQILVVLGIN-------LLITFS--FSNIDKWGHLGGLAAG 211
>gi|397689480|ref|YP_006526734.1| rhomboid family protein [Melioribacter roseus P3M]
gi|395810972|gb|AFN73721.1| rhomboid family protein [Melioribacter roseus P3M]
Length = 231
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 54 LPSAVISRFQVYRF---YTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILL 110
+P I+ F +Y YTS+ HG H+ NMLAL G +E +GS R +L
Sbjct: 48 VPYRFINDFDIYEISTIYTSMFLHGGWAHIFSNMLALYIFGDNVEDRLGSFRYLIFYLLT 107
Query: 111 ATSNAILHL 119
T+ A+LH+
Sbjct: 108 GTAAALLHI 116
>gi|303275255|ref|XP_003056925.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461277|gb|EEH58570.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 392
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 85/190 (44%), Gaps = 36/190 (18%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T A++ Y++ +L G+ +F + +A I+ QVYR T ++ HGS LH+L N +
Sbjct: 179 TDALLWTTAIGYVLQVLTGH-AFTAMGAKVNAEIAAGQVYRLVTPLLLHGSPLHLLVNCM 237
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
+L LG +ER G R ++ + LA+ +L Y++ A+G S
Sbjct: 238 SLHNLGPVIERQFG--RDSFVGLYLASGIGGNYL----------SYKM---CPNNAVGAS 282
Query: 146 GVIFSLIVI-------ETSLSGA----QSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSL 194
G IF L+ + L GA Q +S+ G + A LF ++ +
Sbjct: 283 GAIFGLVGAMGVYLHRHSDLFGAVGDRQLQSLLGSVGVNA---------LFGMMSRRIDN 333
Query: 195 LGHLCGILSG 204
HL G L+G
Sbjct: 334 WAHLGGFLTG 343
>gi|311977917|ref|YP_003987037.1| putative rhomboid protein [Acanthamoeba polyphaga mimivirus]
gi|82000101|sp|Q5UQ86.1|RHBDL_MIMIV RecName: Full=Putative rhomboid protein L523
gi|55417137|gb|AAV50787.1| unknown [Acanthamoeba polyphaga mimivirus]
gi|308204450|gb|ADO18251.1| putative rhomboid protein [Acanthamoeba polyphaga mimivirus]
gi|339061465|gb|AEJ34769.1| hypothetical protein MIMI_L523 [Acanthamoeba polyphaga mimivirus]
Length = 171
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 68/137 (49%), Gaps = 21/137 (15%)
Query: 73 FHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYR 132
+H +L H+L N + L S LE +MG + + I + +++L LL H F
Sbjct: 38 YHANLQHLLANSFSFYML-SFLEDVMGHAKFAFCIIFIWILSSML-----LLAEHTAFPS 91
Query: 133 LQNVMDECAIGFSGVIFSLIVIE-TSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTN 191
+ +GFSGVIF LIV+ SL + S+ GL +L ++ Q ++
Sbjct: 92 RK----VYTVGFSGVIFGLIVVYLMSLGKNRGLSIAGL----------VLSIIPQFFVSG 137
Query: 192 VSLLGHLCGILSGFAYT 208
+S GH+CG+++GF Y
Sbjct: 138 ISYEGHICGMIAGFVYV 154
>gi|404406119|ref|ZP_10997703.1| hypothetical protein AJC13_11845 [Alistipes sp. JC136]
Length = 200
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 65/152 (42%), Gaps = 20/152 (13%)
Query: 62 FQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLI 121
F Y+F T + H + H+ FNM AL G LE +GS R ++ A++ L
Sbjct: 47 FHTYQFITYMFLHANFEHIFFNMFALWMFGRTLEYELGSQRFLTFYMVCGIGAALIQYLT 106
Query: 122 ALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIP----AKWY 177
AL +P +G SG + L++ + +V L P AKW+
Sbjct: 107 ALAFGELPL---------LLVGASGAVMGLLL---AFGVMHPNAVIMLLIPPIPMKAKWF 154
Query: 178 PLILLVLFQVL----MTNVSLLGHLCGILSGF 205
+I V+ L + NV+ H+ G+L GF
Sbjct: 155 VIIYAVIELFLGWRGVGNVAHFAHVGGMLWGF 186
>gi|333929556|ref|YP_004503135.1| Rhomboid protease glpG [Serratia sp. AS12]
gi|333934509|ref|YP_004508087.1| Rhomboid protease glpG [Serratia plymuthica AS9]
gi|386331379|ref|YP_006027549.1| Rhomboid protease glpG [Serratia sp. AS13]
gi|333476116|gb|AEF47826.1| Rhomboid protease glpG [Serratia plymuthica AS9]
gi|333493616|gb|AEF52778.1| Rhomboid protease glpG [Serratia sp. AS12]
gi|333963712|gb|AEG30485.1| Rhomboid protease glpG [Serratia sp. AS13]
Length = 278
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 45/87 (51%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
T V+++C +Y++ G D+ P Q++R+ + H SLLH+ FN+
Sbjct: 97 LTLGVMVLCIAVYILMQAMGDDTVMYWLSWPQDSSQYPQLWRWVSHAFLHFSLLHITFNL 156
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
L LG LE+ +G+ ++F + ++ A
Sbjct: 157 LWWWYLGGPLEKRLGTGKLFVLAVVSA 183
>gi|163803401|ref|ZP_02197276.1| hypothetical protein 1103602000602_AND4_16444 [Vibrio sp. AND4]
gi|159172805|gb|EDP57650.1| hypothetical protein AND4_16444 [Vibrio sp. AND4]
Length = 279
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 55/93 (59%), Gaps = 5/93 (5%)
Query: 26 TSAVVIVCGTIYLICLLFGY-DSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
T V++VC IY + + FG+ D + + P+ ++Q++R+ + + H S+ H++FN+
Sbjct: 100 TLLVMLVCVVIYFLQM-FGFGDGVFSVLHFPAFEGQQWQLWRWISHALLHFSVTHIVFNL 158
Query: 85 LALVPLGSELERIMGS---VRMFYITILLATSN 114
L LG ++ER + S +++F+I+ L+ +
Sbjct: 159 LWWWQLGGDIERRLSSGKLLQIFFISAALSGAG 191
>gi|403237491|ref|ZP_10916077.1| rhomboid protein membrane-associated serine peptidase [Bacillus sp.
10403023]
Length = 515
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 23 PFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSL 77
PFFT ++ + ++ + L+G + E L F++ +RF+T ++ H
Sbjct: 181 PFFTYILIAIQLIMFAVLELYGGSTNTE-TLLKYGAKENFRILNGEWWRFFTPMILHIGF 239
Query: 78 LHVLFNMLALVPLGSELERIMGSVRMFYITI 108
+H+L N AL LG+E+ER+ G R I +
Sbjct: 240 IHLLMNTFALYYLGTEVERLYGKSRFLMIYV 270
>gi|351737683|gb|AEQ60718.1| Integral membrane protein [Acanthamoeba castellanii mamavirus]
gi|398257347|gb|EJN40955.1| hypothetical protein lvs_L452 [Acanthamoeba polyphaga
lentillevirus]
Length = 171
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 68/137 (49%), Gaps = 21/137 (15%)
Query: 73 FHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYR 132
+H +L H+L N + L S LE +MG + + I + +++L LL H F
Sbjct: 38 YHANLQHLLANSFSFYML-SFLEDVMGHAKFAFCIIFIWILSSML-----LLAEHTAFPS 91
Query: 133 LQNVMDECAIGFSGVIFSLIVIE-TSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTN 191
+ +GFSGVIF LIV+ SL + S+ GL +L ++ Q ++
Sbjct: 92 RK----VYTVGFSGVIFGLIVVYLMSLGKNRGLSIAGL----------VLSIIPQFFVSG 137
Query: 192 VSLLGHLCGILSGFAYT 208
+S GH+CG+++GF Y
Sbjct: 138 ISYEGHICGMIAGFVYV 154
>gi|357019099|ref|ZP_09081357.1| rhomboid family protein [Mycobacterium thermoresistibile ATCC
19527]
gi|356481160|gb|EHI14270.1| rhomboid family protein [Mycobacterium thermoresistibile ATCC
19527]
Length = 281
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 25/161 (15%)
Query: 46 DSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFY 105
F E L + ++ + YR TS H L+H+LFNM AL +G LE +G +R
Sbjct: 95 TGFTEAFVLWAPAVAAGEYYRLVTSAFLHFGLMHLLFNMFALYVIGGPLEAALGRLRFGL 154
Query: 106 ITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRS 165
+ L A ++L L+A M+ A G SG +F L A +
Sbjct: 155 LYALSALGGSVLVYLLA--------------MNPTA-GASGAVFGLF--------AATYV 191
Query: 166 VFGLFNIPAKWYPLILLV--LFQVLMTNVSLLGHLCGILSG 204
V N+ ++ +++V + ++ +S GHL G+L+G
Sbjct: 192 VAKRLNLDVRFVTGLIVVNLVITFVVPGISWQGHLGGLLTG 232
>gi|297200957|ref|ZP_06918354.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
gi|197712264|gb|EDY56298.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
Length = 294
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 67/161 (41%), Gaps = 19/161 (11%)
Query: 53 FLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLAT 112
F P+ ++ Q YR TS+ H + H+ FNM++L LG LE +G R + +
Sbjct: 120 FQPTEGVADGQYYRLVTSMFAHQEIWHIGFNMMSLWWLGGPLEAALGRARYLTVYFVSGL 179
Query: 113 SNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNI 172
+ L L+A +G SG IF L L R + L I
Sbjct: 180 AGGALAYLLA-------------SPSTATLGASGAIFGLFGATAVL---MRRLNYDLRPI 223
Query: 173 PAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFN 213
A L++ ++F + +S H+ G+++G YG +
Sbjct: 224 IAL---LVINLIFTFSWSGISWQAHIGGLVAGLITGYGMVH 261
>gi|412988740|emb|CCO15331.1| Rhomboid family protein [Bathycoccus prasinos]
Length = 249
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 42/93 (45%), Gaps = 15/93 (16%)
Query: 59 ISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILH 118
+S Q YR TS HG L+H+ NM ++ +GS +ERI G + L A
Sbjct: 108 VSNGQYYRLLTSAFLHGGLVHLFVNMYSVNAIGSAVERIFGKTHTYAAFTLSA------- 160
Query: 119 LLIALLVAHIPFYRLQNVMDECAIGFSGVIFSL 151
L +I Y++ A+G SG IF L
Sbjct: 161 -----LSGNIASYKMSKY---PAVGASGAIFGL 185
>gi|89894371|ref|YP_517858.1| hypothetical protein DSY1625 [Desulfitobacterium hafniense Y51]
gi|219668797|ref|YP_002459232.1| rhomboid family protein [Desulfitobacterium hafniense DCB-2]
gi|423073963|ref|ZP_17062698.1| peptidase, S54 family [Desulfitobacterium hafniense DP7]
gi|89333819|dbj|BAE83414.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219539057|gb|ACL20796.1| Rhomboid family protein [Desulfitobacterium hafniense DCB-2]
gi|361855174|gb|EHL07168.1| peptidase, S54 family [Desulfitobacterium hafniense DP7]
Length = 327
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 98/214 (45%), Gaps = 37/214 (17%)
Query: 7 SEAGLSTRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFL----PSAVISRF 62
SE+ S R+ Q P+ T ++ + ++ + L G + + L +A+I +
Sbjct: 135 SESTPSARSGQ---GPPYLTYTLIAINLIVFGLMTLAGGSTRTGVLILFGAKVNALIIQG 191
Query: 63 QVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIA 122
+ +R +TS+ H LH+ FN+ AL LG+ E ++G VR YIT+ ++L
Sbjct: 192 EYWRLFTSMFLHIGFLHLAFNLYALWALGAIAEELLGRVR--YITV---------YILSG 240
Query: 123 LLVAHIPFYRLQNVMDECAIGFSGVIFSL---IVIETSLSGAQSRSVFGLFNIPAKWYPL 179
+L + F+ D + G SG IF + +V+ + +S FG L
Sbjct: 241 ILGSVASFF----FTDAISAGASGAIFGILGALVVYSRRKPFLWKSGFG--------KSL 288
Query: 180 ILLVLFQV----LMTNVSLLGHLCGILSGFAYTY 209
++VL + T + + HL G+++G +T+
Sbjct: 289 AVVVLINLGLGFFQTGIDVYAHLGGLVTGMLFTW 322
>gi|418619999|ref|ZP_13182810.1| peptidase, S54 family [Staphylococcus hominis VCU122]
gi|374823562|gb|EHR87557.1| peptidase, S54 family [Staphylococcus hominis VCU122]
Length = 485
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 23/169 (13%)
Query: 46 DSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGS 100
+ F +I L + F V YR TS+ H + H+L NML+L G +E I+G
Sbjct: 178 NHFSDIKLLDVGGLVHFNVVHGEWYRLITSMFLHFNFEHILMNMLSLFIFGKIVETIVGP 237
Query: 101 VRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLI-VIETSLS 159
+M I LI+ L + F L + ++G SG IF LI I T +
Sbjct: 238 YKMLGI------------YLISGLFGN--FASLSFNISTISVGASGAIFGLIGAILTMMY 283
Query: 160 GAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYT 208
+++ F I +++L+ + M+N++L+ HL G + GF T
Sbjct: 284 LSKT---FNKKMIIQLLVVVLILIFVSLFMSNINLMAHLGGFIGGFLIT 329
>gi|343427413|emb|CBQ70940.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 433
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 112/276 (40%), Gaps = 28/276 (10%)
Query: 20 ESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLH 79
IP T ++ G I L C+L + + P VISRF ++R +TS F G L
Sbjct: 5 NKIPPVTRYMLAATGAITLPCVLAITSPTPFVLYWP-WVISRFHIHRIFTSFFFGGGGLK 63
Query: 80 VLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDE 139
+LF++ L S+LE R T ++L + +L A+ P
Sbjct: 64 LLFDVFLLYRNSSDLELNHFGRRTADYTW------SLLVMGTVILAANYPL--------G 109
Query: 140 CAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLC 199
A+ F ++ +L+ + + S S FG+ N P++W P + + L + + +
Sbjct: 110 SAVHFGPLLNALVYVWARANPTSSVSFFGMVNCPSRWLPYVYIGLDLLQGGPPAAIQSST 169
Query: 200 GILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFILCTGGNPSGYIPTYSGQN 259
G+L+G Y Y + ++P S I P F+ P PT GQN
Sbjct: 170 GLLAG--YVYWLLDQVLPAQRRGGGRGGS-----YIPTPGFLQNL--LPDSLDPTLEGQN 220
Query: 260 TSSSG---LFSGNIWSNLSSWMPQRETSSQPTQDSR 292
+ + G +W N S R +SS + SR
Sbjct: 221 MGNRNARRVAGGTVW-NASRDRGHRLSSSPASTPSR 255
>gi|418886814|ref|ZP_13440962.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1150]
gi|377725767|gb|EHT49880.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1150]
Length = 314
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 75/171 (43%), Gaps = 27/171 (15%)
Query: 46 DSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGS 100
++F ++ L + F V YR TS+ H S H+L NML+L G +E I+GS
Sbjct: 6 NNFSDVKLLDVGGLVHFNVVHGEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAIIGS 65
Query: 101 VRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSL---IVIETS 157
RM + IA L + F L ++G SG IF L I
Sbjct: 66 WRMLTV------------YFIAGLFGN--FVSLSFNTTTISVGASGAIFGLIGSIFAMMY 111
Query: 158 LSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYT 208
+S ++ + G I L++LV + M+N++++ H+ G + G T
Sbjct: 112 VSKTFNKKMLGQLLI-----ALVILVGVSLFMSNINIVAHIGGFIGGLLIT 157
>gi|397163366|ref|ZP_10486831.1| rhomboid protease glpG [Enterobacter radicincitans DSM 16656]
gi|396095513|gb|EJI93058.1| rhomboid protease glpG [Enterobacter radicincitans DSM 16656]
Length = 276
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 61/122 (50%), Gaps = 17/122 (13%)
Query: 32 VCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLG 91
+C ++++ + G + P +F+++R++T + H SL+H+LFN+ LG
Sbjct: 103 LCVFVFVVMSVIGDQTVMMWLAWPWDASVQFEIWRYFTHAIMHFSLVHILFNLFWWWYLG 162
Query: 92 SELERIMGSVRMFYITILLA-TSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFS 150
+E+ +G+ ++ IT++ A S + H L P++ G SGV+++
Sbjct: 163 GAVEKRLGTGKLVVITLISALLSGFVQHQLTG------PWFG----------GLSGVVYA 206
Query: 151 LI 152
LI
Sbjct: 207 LI 208
>gi|356575933|ref|XP_003556090.1| PREDICTED: inactive rhomboid protein 1-like isoform 1 [Glycine max]
Length = 329
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 73/156 (46%), Gaps = 26/156 (16%)
Query: 58 VISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAIL 117
V++R Q +R +T I H ++H+L NML+LV +G LE+ G +++ I ++ ++L
Sbjct: 110 VVNRHQGWRLFTCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFIKIGIIYLVSGFGGSVL 169
Query: 118 HLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPA-KW 176
L + D ++G SG +F L+ GA + + I + K
Sbjct: 170 SSLF--------------IRDHISVGASGALFGLL-------GAMLSELITNWTIYSNKA 208
Query: 177 YPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFF 212
LI L++ V+ + +L H + FA+ GF
Sbjct: 209 MALITLLVIIVINLGIGILPH----VDNFAHIGGFL 240
>gi|90408718|ref|ZP_01216866.1| glpG protein [Psychromonas sp. CNPT3]
gi|90310169|gb|EAS38306.1| glpG protein [Psychromonas sp. CNPT3]
Length = 285
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 25/185 (13%)
Query: 26 TSAVVIVCGTIY-LICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
T +V+ +C ++ L+ + F +F + F + Q +RF + H SLLH++FN+
Sbjct: 101 THSVLGLCVFVFILMNIGFSESTFRALAFFVNQPFDLSQSWRFISPAFLHFSLLHIVFNL 160
Query: 85 LALVPLGSELERIMGSVRMFYITILLA-TSNAILHLLIALLVAHIPFYRLQNVMDECAIG 143
L L +E+ GS R+ + + A SN + L++ P++ G
Sbjct: 161 LWWWQLAGVIEKQQGSARLLILFVFSAIASNLAQYFLVS------PYFG----------G 204
Query: 144 FSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKW----YPLILLVLFQVLMTNVSLLGHLC 199
SGV+++L V LSG +S L N+P + + L +L NV+ HL
Sbjct: 205 LSGVVYTL-VGYCWLSGRLDKS--SLVNLPQSYFLFLLFWLALGFVDILPVNVANYAHLV 261
Query: 200 GILSG 204
G+L+G
Sbjct: 262 GLLAG 266
>gi|359406802|ref|ZP_09199455.1| peptidase, S54 family [Prevotella stercorea DSM 18206]
gi|357554895|gb|EHJ36590.1| peptidase, S54 family [Prevotella stercorea DSM 18206]
Length = 310
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 83/211 (39%), Gaps = 27/211 (12%)
Query: 21 SIPFFTSAVVIVCGTIYLICLLF---GYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSL 77
+IP T ++IV ++L LF G D + L + F +Y+ +T + HG
Sbjct: 3 NIPTITKNLLIVNVVVFLATYLFRTMGVD-LNNVLGLHFFLAPDFHIYQLFTYMFAHGGF 61
Query: 78 LHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIA------LLVAHIPFY 131
H+ FNM AL G +ER G + I+ + L + +P +
Sbjct: 62 SHIFFNMFALWMFGCIVERTWGPKKFLTYYIVCGVGAGLFQELAQFAQFYFIASEQLPHF 121
Query: 132 RLQNVMDEC-----------AIGFSGVIFSLIVIETSLSGAQSRSVFGL-FNIPAKWY-- 177
L M +G SG ++ +++ L + +F L I AKW+
Sbjct: 122 TLAQTMKVANANAAFLNLWTTVGASGAVYGILLAFGMLYPEERIFIFPLPVPIKAKWFVM 181
Query: 178 ---PLILLVLFQVLMTNVSLLGHLCGILSGF 205
+ L + + V+ L HL G++ GF
Sbjct: 182 GYAAIELFMAYSSTGDGVAHLAHLGGMVFGF 212
>gi|205374009|ref|ZP_03226809.1| hypothetical protein Bcoam_12572 [Bacillus coahuilensis m4-4]
Length = 392
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 23 PFFTSAVVIVCGTIYLICLLFGYDS------FYEICFLPSAVISRFQVYRFYTSIVFHGS 76
PFFT + ++ I LFG + F+ F P +I + +RF T I H
Sbjct: 181 PFFTYMFACIQVLMFFILQLFGGSTNPETLVFFGAKFNP--LILEGEWWRFITPIFLHIG 238
Query: 77 LLHVLFNMLALVPLGSELERIMGSVRMFYITIL 109
H+L N ALV +G E+E+I G R +I +L
Sbjct: 239 FFHLLMNTFALVLIGREVEKIFGKWRFLFIYLL 271
>gi|449126889|ref|ZP_21763164.1| hypothetical protein HMPREF9733_00567 [Treponema denticola SP33]
gi|448945092|gb|EMB25967.1| hypothetical protein HMPREF9733_00567 [Treponema denticola SP33]
Length = 209
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 73/158 (46%), Gaps = 13/158 (8%)
Query: 54 LPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATS 113
+P V+ ++F+T HG H+ FNMLAL G +ER +G+ +L+ T
Sbjct: 43 VPILVVEAQTYWQFFTYQFVHGDFFHLAFNMLALFFFGVPVERKIGTKEFILYYLLIGTI 102
Query: 114 NAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIP 173
+ +L L+ A FY + V G SG IF ++++ + ++ + +P
Sbjct: 103 DGVLSFLVY---AATGFYIISLV------GASGAIFGVLLLYAVIYPNSVVYLWAVIPVP 153
Query: 174 AKW----YPLILLVLFQVLMTNVSLLGHLCGILSGFAY 207
A Y +I L+ + V+ L H G+L+G+ Y
Sbjct: 154 APLLILGYAVIELISIFSVGDGVAHLTHFIGLLAGWVY 191
>gi|262404841|ref|ZP_06081395.1| protein GlpG [Vibrio sp. RC586]
gi|262348925|gb|EEY98064.1| protein GlpG [Vibrio sp. RC586]
Length = 277
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 19/87 (21%), Positives = 48/87 (55%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
FT ++ +C I+ + ++ + P+ ++Q++R+ + + H S++H+ FN+
Sbjct: 99 FTLLIMALCIAIFALQTFGAGEAIFATLHFPAQASEQWQIWRWVSHALLHFSVMHIAFNL 158
Query: 85 LALVPLGSELERIMGSVRMFYITILLA 111
L G ++E+ +G+V++ + I+ A
Sbjct: 159 LWWWQFGGDIEQRLGTVKLVKLFIISA 185
>gi|365102667|ref|ZP_09332968.1| rhomboid protease glpG [Citrobacter freundii 4_7_47CFAA]
gi|363646395|gb|EHL85643.1| rhomboid protease glpG [Citrobacter freundii 4_7_47CFAA]
Length = 276
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 32/158 (20%)
Query: 61 RFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLL 120
+F+ +R++T H SL+H+LFN+L LG +E+ +GS ++ IT++ A +
Sbjct: 132 KFEFWRYFTHAFMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITVISALLSG----- 186
Query: 121 IALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVI---------ETSLSGAQSRSVFGLFN 171
Y Q G SGV+++L+ ++ + + +F L
Sbjct: 187 ----------YVQQKFSGPWFGGLSGVVYALMGYVWLRGERDPQSGIFLQRGLIIFALIW 236
Query: 172 IPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTY 209
I A W+ LF + M N + H+ G+ G A +
Sbjct: 237 IVAGWFD-----LFGMSMANGA---HIAGLAVGLAMAF 266
>gi|314936330|ref|ZP_07843677.1| rhomboid family protein [Staphylococcus hominis subsp. hominis C80]
gi|313654949|gb|EFS18694.1| rhomboid family protein [Staphylococcus hominis subsp. hominis C80]
Length = 485
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 23/169 (13%)
Query: 46 DSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGS 100
+ F +I L + F V YR TS+ H + H+L NML+L G +E I+G
Sbjct: 178 NHFSDIKLLDVGGLVHFNVVHGEWYRLITSMFLHFNFEHILMNMLSLFIFGKIVETIVGP 237
Query: 101 VRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLI-VIETSLS 159
+M I LI+ L + F L + ++G SG IF LI I T +
Sbjct: 238 YKMLGI------------YLISGLFGN--FASLSFNISTISVGASGAIFGLIGAILTMMY 283
Query: 160 GAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYT 208
+++ F I +++L+ + M+N++L+ HL G + GF T
Sbjct: 284 LSKT---FNKKMIIQLLVVVLILIFVSLFMSNINLMAHLGGFIGGFLIT 329
>gi|228476169|ref|ZP_04060877.1| rhomboid family protein [Staphylococcus hominis SK119]
gi|228269992|gb|EEK11472.1| rhomboid family protein [Staphylococcus hominis SK119]
Length = 485
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 23/169 (13%)
Query: 46 DSFYEICFLPSAVISRFQV-----YRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGS 100
+ F +I L + F V YR TS+ H + H+L NML+L G +E I+G
Sbjct: 178 NHFSDIKLLDVGGLVHFNVVHGEWYRLITSMFLHFNFEHILMNMLSLFIFGKIVETIVGP 237
Query: 101 VRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLI-VIETSLS 159
+M I LI+ L + F L + ++G SG IF LI I T +
Sbjct: 238 YKMLGI------------YLISGLFGN--FASLSFNISTISVGASGAIFGLIGAILTMMY 283
Query: 160 GAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYT 208
+++ F I +++L+ + M+N++L+ HL G + GF T
Sbjct: 284 LSKT---FNKKMIIQLLVVVLILIFVSLFMSNINLMAHLGGFIGGFLIT 329
>gi|407985614|ref|ZP_11166204.1| rhomboid family protein [Mycobacterium hassiacum DSM 44199]
gi|407372772|gb|EKF21798.1| rhomboid family protein [Mycobacterium hassiacum DSM 44199]
Length = 221
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 63/149 (42%), Gaps = 15/149 (10%)
Query: 3 PNIVSEAGLSTRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRF 62
P V EA + RA + + P T + + ++++ L + L S ++
Sbjct: 44 PACVREAAQTVRAPRLRPAAPVVTYTFIAISVVMFVVQL--AAQDVERLLVLNSLAVADG 101
Query: 63 QVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIA 122
Q YR TS H +H+LFNM AL +G LE +G +R + + A ++L L+A
Sbjct: 102 QWYRLLTSTFLHFGPVHLLFNMWALYVVGPPLESALGRLRFTALYLAGALGGSVLVYLLA 161
Query: 123 LLVAHIPFYRLQNVMDECAIGFSGVIFSL 151
L + G SG +F L
Sbjct: 162 PL-------------NAATAGASGAVFGL 177
>gi|395228798|ref|ZP_10407116.1| rhomboid protease glpG [Citrobacter sp. A1]
gi|421845042|ref|ZP_16278198.1| intramembrane serine protease GlpG [Citrobacter freundii ATCC 8090
= MTCC 1658]
gi|424732524|ref|ZP_18161102.1| glycerol-3-phosphate regulon repressor [Citrobacter sp. L17]
gi|394717504|gb|EJF23188.1| rhomboid protease glpG [Citrobacter sp. A1]
gi|411773905|gb|EKS57433.1| intramembrane serine protease GlpG [Citrobacter freundii ATCC 8090
= MTCC 1658]
gi|422893183|gb|EKU33032.1| glycerol-3-phosphate regulon repressor [Citrobacter sp. L17]
gi|455640958|gb|EMF20161.1| intramembrane serine protease GlpG [Citrobacter freundii GTC 09479]
Length = 276
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 32/158 (20%)
Query: 61 RFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLL 120
+F+ +R++T H SL+H+LFN+L LG +E+ +GS ++ IT++ A +
Sbjct: 132 KFEFWRYFTHAFMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITVISALLSG----- 186
Query: 121 IALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVI---------ETSLSGAQSRSVFGLFN 171
Y Q G SGV+++L+ ++ + + +F L
Sbjct: 187 ----------YVQQKFSGPWFGGLSGVVYALMGYVWLRGERDPQSGIFLQRGLIIFALIW 236
Query: 172 IPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTY 209
I A W+ LF + M N + H+ G+ G A +
Sbjct: 237 IVAGWFD-----LFGMSMANGA---HIAGLAVGLAMAF 266
>gi|262273586|ref|ZP_06051400.1| protein GlpG [Grimontia hollisae CIP 101886]
gi|262222564|gb|EEY73875.1| protein GlpG [Grimontia hollisae CIP 101886]
Length = 278
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 25 FTSAVVIVCGTIYL-ICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFN 83
FT AV++VC ++ + L G D F + F P+ ++Q++R ++ + H S H++FN
Sbjct: 99 FTLAVMVVCIVVFAGLTLGLGNDVFSLLHF-PATEAQQWQLWRLFSHALLHFSATHIVFN 157
Query: 84 MLALVPLGSELERIMGSVRMFYITIL 109
+L LG ++E+ GS ++ + +L
Sbjct: 158 LLWWWVLGGKIEQHSGSTKLMSLFLL 183
>gi|259481742|tpe|CBF75549.1| TPA: rhomboid family protein, putative (AFU_orthologue;
AFUA_6G12750) [Aspergillus nidulans FGSC A4]
Length = 273
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 100/232 (43%), Gaps = 16/232 (6%)
Query: 13 TRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIV 72
+R + +P FT VV+ +L+ L + +P + + +YR T
Sbjct: 15 SRVRSYLLRLPLFTRLVVLAIIVFWLLELQTVWSVVQWGALIPDELGLK-TMYRTNTYPF 73
Query: 73 FHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITI-LLATSNAILHLLIALLVAHIPFY 131
H H N+LAL PL E G++ + + L+T A L++LI + H
Sbjct: 74 IHTGFFHAFLNLLALTPLLERFEAEHGTLTAIALFMGPLSTFPAGLYVLIEKFILH---- 129
Query: 132 RLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVF--GLFNIPAKWYPLILLVLFQVLM 189
+ +G S +F L+ E ++ +S F G IP PL++ VL +L+
Sbjct: 130 -----GNNSVVGSSVWVFLLLGSE-AIRTYKSHPYFSLGTTKIPTWTSPLLVCVLVWILV 183
Query: 190 TNVSLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFI 241
N S LGHLC IL G+ G+ +L+P IE L+ R P ++
Sbjct: 184 PNTSFLGHLCSILIGYLLGLGYLKVLVPPEKVLRFIEGK--LNLLGRLPHYV 233
>gi|284043226|ref|YP_003393566.1| rhomboid family protein [Conexibacter woesei DSM 14684]
gi|283947447|gb|ADB50191.1| Rhomboid family protein [Conexibacter woesei DSM 14684]
Length = 274
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 58 VISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVR--MFYITILLATSNA 115
+ R +++R TS H SL H+LFNM + LG LE ++G VR Y T LL S A
Sbjct: 101 IAQRDEIWRMVTSGFLHASLFHILFNMWFIWVLGRMLEPVLGHVRFVTLYFTALLCGSFA 160
Query: 116 ILHL 119
+L L
Sbjct: 161 VLLL 164
>gi|160901697|ref|YP_001567278.1| rhomboid family protein [Petrotoga mobilis SJ95]
gi|160359341|gb|ABX30955.1| Rhomboid family protein [Petrotoga mobilis SJ95]
Length = 226
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 100/231 (43%), Gaps = 33/231 (14%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFY---EICFLPSA----VISRFQVYRFYTSIVFHGSLL 78
TS ++++ I+++ LFG S + I L A +I+ + +R TS+ HG L
Sbjct: 6 TSYLIMLNVLIFIMMFLFGGLSAFSNPRIYILFGAQLGNLITAGEWFRLITSMFVHGGLF 65
Query: 79 HVLFNMLALVPLGSELERIMGSVRMFYITILLAT-SNAILHLLIALLVAHIPFYRLQNVM 137
H+ FNM+AL +G+ +ER G R I +L N + HL +
Sbjct: 66 HIFFNMIALFYVGNIVERAYGKERFISIYMLSGIFGNLLTHLFLP--------------- 110
Query: 138 DECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLM-----TNV 192
+ ++G SG IF LI + L GA R P L+ ++L V+ N+
Sbjct: 111 NAISVGASGAIFGLIGL---LFGAGFRHDTPTILRPVTGTALLPIILINVIWGFLPGANI 167
Query: 193 SLLGHLCGILSGFAYTYGFFNLLMPGTSFYSAIESSSLLSTCIRQPKFILC 243
+ HL G+ G +T+G+ + Y + S LS + F+L
Sbjct: 168 NNFAHLGGL--GIGFTFGWLTSIRYTKRSYQGWRTFSYLSYGLIIASFVLL 216
>gi|309811347|ref|ZP_07705134.1| peptidase, S54 family [Dermacoccus sp. Ellin185]
gi|308434654|gb|EFP58499.1| peptidase, S54 family [Dermacoccus sp. Ellin185]
Length = 311
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 64/122 (52%), Gaps = 7/122 (5%)
Query: 3 PNIVSEAGLSTRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFY-EICFLPSAVISR 61
P + + + L + P T ++ +C ++L L D+ Y ++ F+ AV +R
Sbjct: 70 PTLPTRSSLGMTTGAAAQGRPVVTIGIIAICCLVWLGQL--ASDALYRDVSFV--AVFAR 125
Query: 62 FQVYRFYTSIVFH--GSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHL 119
+ +R+ TS H G+ +H+LFNM+AL +G LE ++G VR + +L ++++
Sbjct: 126 DEPWRYLTSGFAHDTGTPMHLLFNMMALYFMGQYLEPLIGRVRFGALYLLSVLGGSVVYQ 185
Query: 120 LI 121
++
Sbjct: 186 IM 187
>gi|283835815|ref|ZP_06355556.1| hypothetical protein CIT292_10213 [Citrobacter youngae ATCC 29220]
gi|291067984|gb|EFE06093.1| rhomboid protease GlpG [Citrobacter youngae ATCC 29220]
Length = 277
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 32/158 (20%)
Query: 61 RFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLL 120
+F+ +R++T H SL+H+LFN+L LG +E+ +GS ++ IT++ A +
Sbjct: 132 KFEFWRYFTHAFMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITVISALLSG----- 186
Query: 121 IALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVI---------ETSLSGAQSRSVFGLFN 171
Y Q G SGV+++L+ ++ + + +F L
Sbjct: 187 ----------YVQQKFSGPWFGGLSGVVYALMGYVWLRGERDPQSGIFLQRGLIIFALIW 236
Query: 172 IPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTY 209
I A W+ LF + M N + H+ G+ G A +
Sbjct: 237 IVAGWFD-----LFGMSMANGA---HIAGLAVGLAMAF 266
>gi|381208752|ref|ZP_09915823.1| hypothetical protein LGrbi_02305 [Lentibacillus sp. Grbi]
Length = 252
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 29/44 (65%)
Query: 59 ISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVR 102
IS+ Q +R TSI H L+HVLFN ALV G LE+++G V+
Sbjct: 55 ISQGQYWRLITSIFLHAGLMHVLFNSFALVLFGPALEQMLGKVK 98
>gi|166007306|pdb|3B44|A Chain A, Crystal Structure Of Glpg W136a Mutant
Length = 180
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 83/193 (43%), Gaps = 32/193 (16%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T ++I C +++ + G P +F+ R++T + H SL+H+LFN+L
Sbjct: 7 TWVMMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFARYFTHALMHFSLMHILFNLL 66
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LG +E+ +GS ++ IT L+ ALL ++ Q G S
Sbjct: 67 WWWYLGGAVEKRLGSGKLIVIT-----------LISALLSGYVQ----QKFSGPWFGGLS 111
Query: 146 GVIFSLIVI---------ETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLG 196
GV+++L+ ++ + + +F L I A W+ LF + M N +
Sbjct: 112 GVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFD-----LFGMSMANGA--- 163
Query: 197 HLCGILSGFAYTY 209
H+ G+ G A +
Sbjct: 164 HIAGLAVGLAMAF 176
>gi|118442959|ref|YP_877647.1| rhomboid family membrane protein [Clostridium novyi NT]
gi|118133415|gb|ABK60459.1| conserved membrane protein (rhomboid family) [Clostridium novyi NT]
Length = 202
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 15/98 (15%)
Query: 55 PSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSN 114
+ ++S + YR +T + HG L+H+L NM AL +G +ERI G V+ YI I L
Sbjct: 60 ENTLVSNGEYYRLFTCMFLHGGLIHLLANMYALGAIGPIVERIYGKVK--YIIIYLVGG- 116
Query: 115 AILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLI 152
+I+ + +H F R +IG SG IF+L+
Sbjct: 117 -----IISSIASHF-FLR------GVSIGASGAIFALL 142
>gi|110803398|ref|YP_698757.1| rhomboid family protein [Clostridium perfringens SM101]
gi|110683899|gb|ABG87269.1| rhomboid family protein [Clostridium perfringens SM101]
Length = 342
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 69/153 (45%), Gaps = 24/153 (15%)
Query: 56 SAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNA 115
+A+I + YR TS+ H ++H+LFNM AL LG +ERI G+ + Y+ I +
Sbjct: 195 NAIIFHGEYYRLVTSMFLHSGIVHLLFNMYALYILGDFIERIYGAKK--YLVIYFVSG-- 250
Query: 116 ILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAK 175
+VA I VM +G SG IF L+ + + + A
Sbjct: 251 --------IVASIFSLYFSPVM---GVGASGAIFGLLGAALVFAYNEKDRIG-----KAL 294
Query: 176 WYPLILLVLFQVL----MTNVSLLGHLCGILSG 204
+I+++L V M+N+ + H G ++G
Sbjct: 295 VTNIIVIILLNVFIGLSMSNIDISAHFGGFIAG 327
>gi|340621608|ref|YP_004740060.1| hypothetical protein Ccan_08350 [Capnocytophaga canimorsus Cc5]
gi|339901874|gb|AEK22953.1| Uncharacterized protein C13E711 [Capnocytophaga canimorsus Cc5]
Length = 249
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 79/190 (41%), Gaps = 46/190 (24%)
Query: 61 RFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLL 120
F +++F T + HG L+H+ FNM AL G+ LE I G + + A++HL
Sbjct: 43 NFHLWQFVTHMFMHGDLMHLFFNMYALWAFGTPLESIWGKQKFLFFYFSCGIGAALMHLG 102
Query: 121 I----------ALLVAHIPFYR----------------------LQNVMDECAI---GFS 145
+ AL +P L+N+++ AI G S
Sbjct: 103 VNYYYYQQGVEALTAVGVPLENINELAAEGKYLVAWSDIVSMSTLKNMVEAYAIPAVGAS 162
Query: 146 GVIFSLIVIETSLSGAQSRSVFGLFNIP--AKWYPLILLVL--------FQVLMTNVSLL 195
G I+ I++ + ++R + L IP AK++ IL+ + F + NV+
Sbjct: 163 GAIYG-ILVAFGMMFPEARLMLFLLPIPIKAKYFIPILVGIDLFSGVTGFSIFGGNVAHF 221
Query: 196 GHLCGILSGF 205
H+ G L GF
Sbjct: 222 AHVGGALIGF 231
>gi|323357945|ref|YP_004224341.1| hypothetical protein MTES_1497 [Microbacterium testaceum StLB037]
gi|323274316|dbj|BAJ74461.1| uncharacterized membrane protein [Microbacterium testaceum StLB037]
Length = 258
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 87/207 (42%), Gaps = 38/207 (18%)
Query: 23 PFFTSAVVIVCGTIYLICLLFGYDS-------FYEICFLPSAVISRFQVYRFYTSIVFHG 75
P T A++ + G +Y+I L+ G + FY +P F+ +R T + H
Sbjct: 33 PVATLAIIAITGLVYIIGLVPGLEPLLSNALLFYGPYLVPQ--FGAFEPWRLLTVSLVHS 90
Query: 76 SLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQN 135
H+ NMLAL +G LE ++G R + +L ++ LIA L
Sbjct: 91 GFFHIGLNMLALWFIGRNLEPLLGRWRFVALYVLGTLGGSVAVALIAPL----------- 139
Query: 136 VMDECAIGFSGVIF----SLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTN 191
+G SG IF +L+VI + GA R + L I W P ++ ++ + +
Sbjct: 140 ---TPVVGASGAIFALFGALLVIGRHI-GADIRVIAVLIGINFAW-PFVVALISSITTGD 194
Query: 192 ---------VSLLGHLCGILSGFAYTY 209
VS HL G+++G A +
Sbjct: 195 FVAALNDVGVSWQAHLGGLVTGAAVGF 221
>gi|365827061|ref|ZP_09368936.1| hypothetical protein HMPREF0975_00719 [Actinomyces sp. oral taxon
849 str. F0330]
gi|365265470|gb|EHM95232.1| hypothetical protein HMPREF0975_00719 [Actinomyces sp. oral taxon
849 str. F0330]
Length = 279
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 79/182 (43%), Gaps = 23/182 (12%)
Query: 26 TSAVVIVCGTIYLICLLF-GYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
T ++ +C Y++ +L D+ + F+P V++ + +RF T+ H + +H+ FNM
Sbjct: 77 TKVLIGLCVAAYVVQVLAPALDA--RLAFVP--VVAAGEPWRFLTTAFLHANYMHLGFNM 132
Query: 85 LALVPLGSELERIMGSVRMFYITIL--LATSNAILHLLIALLVAHIPFYRLQNVMDECAI 142
AL LG LE ++G R + +L L S AI L + + +
Sbjct: 133 WALWVLGGSLEPVLGRWRFTAVYLLSALGGSTAIYWL----------SWPDTDAWGTMTV 182
Query: 143 GFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGHLCGIL 202
G SG +F L + R G+ + L + + L N+S GHL G++
Sbjct: 183 GASGAVFGLFSTMFVVQRRFGRDTSGIVAL------LAINAVISFLGANISWQGHLGGLI 236
Query: 203 SG 204
G
Sbjct: 237 VG 238
>gi|288931169|ref|YP_003435229.1| rhomboid family protein [Ferroglobus placidus DSM 10642]
gi|288893417|gb|ADC64954.1| Rhomboid family protein [Ferroglobus placidus DSM 10642]
Length = 260
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 67/153 (43%), Gaps = 19/153 (12%)
Query: 62 FQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLI 121
F ++ TSI HGS H L N + L+ G ELER +GS R I L I ++L
Sbjct: 107 FMPWQLVTSIFLHGSFDHYLVNAIVLLFFGGELERRLGSKRYLEIFFLSGIVGNIFYILF 166
Query: 122 ALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLIL 181
+ + A+G SG ++ I+ +L + R V F IP IL
Sbjct: 167 SFATNNF----------APAVGASGALYG-IMGALALIAPEIR-VLLFFVIPVDIKTAIL 214
Query: 182 L-VLFQVLM------TNVSLLGHLCGILSGFAY 207
L + +LM T V+ + HL G+L G Y
Sbjct: 215 LFAAYNILMLPFTAFTGVAYIAHLGGLLVGLYY 247
>gi|147818034|emb|CAN64890.1| hypothetical protein VITISV_021082 [Vitis vinifera]
Length = 391
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 51/115 (44%), Gaps = 32/115 (27%)
Query: 56 SAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNA 115
S V+ R QV+R + I H + HVL NML+LV +G LE+ G VR I +L S
Sbjct: 123 SKVVHRHQVWRLISCIWLHAGVFHVLANMLSLVFIGIRLEQEFGFVR---IGLLYVVS-- 177
Query: 116 ILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLF 170
GF G + S + I++S+S S ++FGL
Sbjct: 178 ---------------------------GFGGSMLSSLFIQSSISVGASGALFGLL 205
>gi|422384272|ref|ZP_16464413.1| membrane protein rhomboid family protein [Propionibacterium acnes
HL096PA3]
gi|422429122|ref|ZP_16506027.1| peptidase, S54 family protein [Propionibacterium acnes HL072PA2]
gi|422447666|ref|ZP_16524398.1| peptidase, S54 family protein [Propionibacterium acnes HL036PA3]
gi|422456617|ref|ZP_16533281.1| peptidase, S54 family protein [Propionibacterium acnes HL030PA1]
gi|422479515|ref|ZP_16555925.1| peptidase, S54 family protein [Propionibacterium acnes HL063PA1]
gi|422481722|ref|ZP_16558121.1| peptidase, S54 family protein [Propionibacterium acnes HL036PA1]
gi|422487801|ref|ZP_16564132.1| peptidase, S54 family protein [Propionibacterium acnes HL013PA2]
gi|422489244|ref|ZP_16565571.1| peptidase, S54 family protein [Propionibacterium acnes HL020PA1]
gi|422494346|ref|ZP_16570641.1| peptidase, S54 family protein [Propionibacterium acnes HL025PA1]
gi|422497819|ref|ZP_16574092.1| peptidase, S54 family protein [Propionibacterium acnes HL002PA3]
gi|422504040|ref|ZP_16580277.1| peptidase, S54 family protein [Propionibacterium acnes HL027PA2]
gi|422504749|ref|ZP_16580983.1| peptidase, S54 family protein [Propionibacterium acnes HL036PA2]
gi|422509223|ref|ZP_16585381.1| peptidase, S54 family protein [Propionibacterium acnes HL046PA2]
gi|422514207|ref|ZP_16590328.1| peptidase, S54 family protein [Propionibacterium acnes HL087PA2]
gi|422535157|ref|ZP_16611080.1| peptidase, S54 family protein [Propionibacterium acnes HL072PA1]
gi|422552953|ref|ZP_16628740.1| peptidase, S54 family protein [Propionibacterium acnes HL005PA3]
gi|422554818|ref|ZP_16630588.1| peptidase, S54 family protein [Propionibacterium acnes HL005PA2]
gi|422567566|ref|ZP_16643192.1| peptidase, S54 family protein [Propionibacterium acnes HL002PA2]
gi|313806420|gb|EFS44927.1| peptidase, S54 family protein [Propionibacterium acnes HL087PA2]
gi|313814531|gb|EFS52245.1| peptidase, S54 family protein [Propionibacterium acnes HL025PA1]
gi|313817449|gb|EFS55163.1| peptidase, S54 family protein [Propionibacterium acnes HL046PA2]
gi|313821965|gb|EFS59679.1| peptidase, S54 family protein [Propionibacterium acnes HL036PA1]
gi|313824139|gb|EFS61853.1| peptidase, S54 family protein [Propionibacterium acnes HL036PA2]
gi|313826506|gb|EFS64220.1| peptidase, S54 family protein [Propionibacterium acnes HL063PA1]
gi|314926626|gb|EFS90457.1| peptidase, S54 family protein [Propionibacterium acnes HL036PA3]
gi|314961310|gb|EFT05411.1| peptidase, S54 family protein [Propionibacterium acnes HL002PA2]
gi|314980346|gb|EFT24440.1| peptidase, S54 family protein [Propionibacterium acnes HL072PA2]
gi|314987347|gb|EFT31438.1| peptidase, S54 family protein [Propionibacterium acnes HL005PA2]
gi|314989112|gb|EFT33203.1| peptidase, S54 family protein [Propionibacterium acnes HL005PA3]
gi|315082747|gb|EFT54723.1| peptidase, S54 family protein [Propionibacterium acnes HL027PA2]
gi|315086105|gb|EFT58081.1| peptidase, S54 family protein [Propionibacterium acnes HL002PA3]
gi|315087690|gb|EFT59666.1| peptidase, S54 family protein [Propionibacterium acnes HL072PA1]
gi|315106354|gb|EFT78330.1| peptidase, S54 family protein [Propionibacterium acnes HL030PA1]
gi|327333344|gb|EGE75064.1| membrane protein rhomboid family protein [Propionibacterium acnes
HL096PA3]
gi|327445638|gb|EGE92292.1| peptidase, S54 family protein [Propionibacterium acnes HL013PA2]
gi|328758378|gb|EGF71994.1| peptidase, S54 family protein [Propionibacterium acnes HL020PA1]
Length = 222
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 10/143 (6%)
Query: 65 YRFYTSIVFHG-SLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIAL 123
+RF TS+ H S+ H+ FNM AL LG LE +G R ++ L L+A
Sbjct: 47 WRFVTSMFGHALSIFHIGFNMYALWALGRSLEPFLGRARFLAAYLMSGLGGGALFCLMA- 105
Query: 124 LVAHIPFYRLQNVMDECAIGFSGVIFS----LIVIETSLSGAQSRSVFGLFNIPAKWYPL 179
A L NV D+ +G SG IF L++++ L GA +R ++ + I A
Sbjct: 106 -TADGGRAILPNV-DDGVVGASGAIFGLFGVLLIVQRRL-GASTRELWVVLAINAALLLF 162
Query: 180 ILLVLFQVLMTNVSLLGHLCGIL 202
I + +Q + L+G +CG++
Sbjct: 163 ISGIAWQAHLGGF-LVGMMCGVI 184
>gi|294879228|ref|XP_002768610.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239871281|gb|EER01328.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 277
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 76/173 (43%), Gaps = 45/173 (26%)
Query: 1 MRPNIVSEAGLSTRANQW------W--ESIPF-FTSAVVIVCGTIYLICLLFGYDSFYEI 51
++P + S AG +A +W W E P+ T+ ++++ G YL+
Sbjct: 125 LQPVLRSPAG--QKAYEWRYRYKRWIDEKTPYPVTTTMLLLAGVTYLVW----------- 171
Query: 52 CFLPSAVISR-FQVYR----------FYTSIVFHGSLLHVLFNMLALVPLGSELERIMGS 100
F PS ++R F V R T+ + H S H+L N L + GS+LER++G
Sbjct: 172 GFAPSKFMNRNFTVSRENLLHGRFHTLLTASLSHTSFTHLLVNSLVVFVYGSQLERLLGG 231
Query: 101 VRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIV 153
+ I I A + ++ H+L A + + A+G SGV F L+
Sbjct: 232 PALIRIAITSAVAGSLGHILTA------------SDKRDAAVGGSGVAFGLLT 272
>gi|398784354|ref|ZP_10547618.1| hypothetical protein SU9_14461 [Streptomyces auratus AGR0001]
gi|396995277|gb|EJJ06295.1| hypothetical protein SU9_14461 [Streptomyces auratus AGR0001]
Length = 303
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 27/159 (16%)
Query: 59 ISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILH 118
++ + YR T++ H + H+ FNML+L LG LE +G R + +L + L
Sbjct: 134 VAEGEWYRLLTAMFLHQQVAHIAFNMLSLWWLGPPLEAALGRARFIALYLLAGLGGSALS 193
Query: 119 LLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYP 178
+A ++ ++G SG IF L+ L L + P
Sbjct: 194 YFLA-------------AQNQPSLGASGAIFGLLGATAVL----------LRRLRYDMKP 230
Query: 179 LILL----VLFQVLMTNVSLLGHLCGILSGFAYTYGFFN 213
+++L ++F L N++ H+ G++ G A +G +
Sbjct: 231 VLILLGLNLVFTFLWPNIAWQAHVGGLVVGAAVAFGMVH 269
>gi|384422473|ref|YP_005631832.1| rhomboid family protein [Treponema pallidum subsp. pallidum str.
Chicago]
gi|291060339|gb|ADD73074.1| rhomboid family protein [Treponema pallidum subsp. pallidum str.
Chicago]
Length = 194
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 20/189 (10%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T ++V+ G +++I L Y + +P V ++ +T H + H+LFNML
Sbjct: 2 TLSLVLANGAVFVITSLVESLGIY-LALVPGLVRYHRMYWQIFTYQFVHSGVWHLLFNML 60
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LV G +E+ MGS M +L+ T Y ++ +G S
Sbjct: 61 GLVFFGQTIEKKMGSSEMLLFYLLVGTLCG---------AGACAAYLCVGRLNVLLLGAS 111
Query: 146 GVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILL--VLFQVL-----MTNVSLLGHL 198
G IF+++ + + + ++G+ IPA PL+++ +LF++ NVS L HL
Sbjct: 112 GSIFAILFLFSVMFPTALIYLWGVIPIPA---PLLIVGYILFEIFDLFFSRDNVSHLTHL 168
Query: 199 CGILSGFAY 207
G+L + Y
Sbjct: 169 LGVLFAWGY 177
>gi|229816943|ref|ZP_04447225.1| hypothetical protein BIFANG_02194 [Bifidobacterium angulatum DSM
20098 = JCM 7096]
gi|229785688|gb|EEP21802.1| hypothetical protein BIFANG_02194 [Bifidobacterium angulatum DSM
20098 = JCM 7096]
Length = 239
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 19/137 (13%)
Query: 23 PFFTSAVVIVCGTIYLICLLFGY---DSFYEIC----FLPSAVISRFQVYRFYTSIVFHG 75
P T+A+++ C ++L+ ++ Y F I P ++ R + + TS+ H
Sbjct: 20 PVVTTAIIVACVAVWLVEIIARYLMPPVFAAIVNWGMVAPVLMVQR--PWTWLTSMFLHA 77
Query: 76 -SLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQ 134
S+LH+LFNMLAL +G LER++G R F L++ L++ + RL
Sbjct: 78 PSVLHILFNMLALWSVGPMLERMLGHWR-FLAFYLISGFGGAAGLMV--------WARLT 128
Query: 135 NVMDECAIGFSGVIFSL 151
A G SG +F L
Sbjct: 129 GDWGTAAYGASGALFGL 145
>gi|408825539|ref|ZP_11210429.1| hypothetical protein SsomD4_00040 [Streptomyces somaliensis DSM
40738]
Length = 292
Score = 45.1 bits (105), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 71/161 (44%), Gaps = 30/161 (18%)
Query: 59 ISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLA-TSNAIL 117
++ + YR TS+ H + H+ FNML L LG LE +G VR + +L +A+
Sbjct: 123 VADGEWYRILTSVFLHQEVWHIGFNMLGLWMLGGPLEAALGRVRYLALYLLSGLAGSALT 182
Query: 118 HLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWY 177
++L+A ++ ++G SG +F L+ L L +
Sbjct: 183 YVLVA--------------PNQPSLGASGAVFGLMGATFVL----------LRRLRYDPR 218
Query: 178 PLILLVLFQVLMT-----NVSLLGHLCGILSGFAYTYGFFN 213
P++ L+ VL+T ++ HL G+++G YG +
Sbjct: 219 PVLGLIALNVLITFVFRDTIAWQAHLGGLVAGAVVAYGMVS 259
>gi|209884747|ref|YP_002288604.1| rhomboid family protein [Oligotropha carboxidovorans OM5]
gi|337741599|ref|YP_004633327.1| rhomboid-like protein [Oligotropha carboxidovorans OM5]
gi|386030615|ref|YP_005951390.1| rhomboid-like protein [Oligotropha carboxidovorans OM4]
gi|209872943|gb|ACI92739.1| rhomboid family protein [Oligotropha carboxidovorans OM5]
gi|336095683|gb|AEI03509.1| rhomboid-like protein [Oligotropha carboxidovorans OM4]
gi|336099263|gb|AEI07086.1| rhomboid-like protein [Oligotropha carboxidovorans OM5]
Length = 255
Score = 45.1 bits (105), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%)
Query: 64 VYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLL 120
V+ F T + H L H+ FNML ++P GS + R G +R F + + + AI+HLL
Sbjct: 60 VWSFVTYSLLHADLTHIGFNMLWMLPFGSAVARRFGGMRFFLFFAVASIAGAIVHLL 116
>gi|225434919|ref|XP_002283488.1| PREDICTED: inactive rhomboid protein 1 [Vitis vinifera]
Length = 391
Score = 45.1 bits (105), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 51/115 (44%), Gaps = 32/115 (27%)
Query: 56 SAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNA 115
S V+ R QV+R + I H + HVL NML+LV +G LE+ G VR I +L S
Sbjct: 123 SKVVHRHQVWRLISCIWLHAGVFHVLANMLSLVFIGIRLEQEFGFVR---IGLLYVVS-- 177
Query: 116 ILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLF 170
GF G + S + I++S+S S ++FGL
Sbjct: 178 ---------------------------GFGGSMLSSLFIQSSISVGASGALFGLL 205
>gi|213964252|ref|ZP_03392484.1| rhomboid family protein [Capnocytophaga sputigena Capno]
gi|213953113|gb|EEB64463.1| rhomboid family protein [Capnocytophaga sputigena Capno]
Length = 219
Score = 45.1 bits (105), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 36/77 (46%)
Query: 60 SRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHL 119
+ F +++ + + HG +H+ FNM AL G+ LE I G + + A+LH
Sbjct: 10 THFGWWQYVSYMFMHGDFMHLFFNMYALWAFGTPLENIWGRNKFLFFYFSCGVGAALLHT 69
Query: 120 LIALLVAHIPFYRLQNV 136
++ H LQNV
Sbjct: 70 MVNYYYVHQGLEALQNV 86
>gi|108803986|ref|YP_643923.1| rhomboid-like protein [Rubrobacter xylanophilus DSM 9941]
gi|108765229|gb|ABG04111.1| Rhomboid-like protein [Rubrobacter xylanophilus DSM 9941]
Length = 209
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Query: 59 ISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILH 118
++R +V+R TS+ H +H+ NML+L LGS E G +R F + +L S+ I +
Sbjct: 34 VARGEVWRLLTSMFLHAGFIHLALNMLSLYFLGSFAETAFGRLRFFALYMLSGLSSGIAY 93
Query: 119 LLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLI 152
L + A+G SG IF L+
Sbjct: 94 LYF-------------GGFAQPAVGASGAIFGLL 114
>gi|374995763|ref|YP_004971262.1| hypothetical protein Desor_3244 [Desulfosporosinus orientis DSM
765]
gi|357214129|gb|AET68747.1| putative membrane protein [Desulfosporosinus orientis DSM 765]
Length = 316
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 4/100 (4%)
Query: 21 SIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRF----QVYRFYTSIVFHGS 76
SIPF T ++ + ++ + L G E+ A ++ +V+RF+TS+ H
Sbjct: 131 SIPFLTYGLIGINLVVFFLMTLAGGSQNREVLIAFGAKVNSLILAGEVWRFFTSMFIHIG 190
Query: 77 LLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAI 116
LH+ FN+ AL LG E++ G R I +L +I
Sbjct: 191 YLHLGFNLYALWVLGPFTEKLFGHWRFLVIYLLSGLGGSI 230
>gi|422387122|ref|ZP_16467239.1| membrane protein rhomboid family protein [Propionibacterium acnes
HL096PA2]
gi|422391919|ref|ZP_16471993.1| membrane protein rhomboid family protein [Propionibacterium acnes
HL099PA1]
gi|422394966|ref|ZP_16475007.1| membrane protein rhomboid family protein [Propionibacterium acnes
HL097PA1]
gi|422425090|ref|ZP_16502036.1| peptidase, S54 family protein [Propionibacterium acnes HL043PA1]
gi|422432052|ref|ZP_16508922.1| peptidase, S54 family protein [Propionibacterium acnes HL059PA2]
gi|422434926|ref|ZP_16511784.1| peptidase, S54 family protein [Propionibacterium acnes HL083PA2]
gi|422436817|ref|ZP_16513664.1| peptidase, S54 family protein [Propionibacterium acnes HL092PA1]
gi|422442648|ref|ZP_16519451.1| peptidase, S54 family protein [Propionibacterium acnes HL002PA1]
gi|422446440|ref|ZP_16523185.1| peptidase, S54 family protein [Propionibacterium acnes HL027PA1]
gi|422450210|ref|ZP_16526927.1| peptidase, S54 family protein [Propionibacterium acnes HL030PA2]
gi|422460611|ref|ZP_16537245.1| peptidase, S54 family protein [Propionibacterium acnes HL038PA1]
gi|422474109|ref|ZP_16550579.1| peptidase, S54 family protein [Propionibacterium acnes HL056PA1]
gi|422476590|ref|ZP_16553029.1| peptidase, S54 family protein [Propionibacterium acnes HL007PA1]
gi|422484011|ref|ZP_16560390.1| peptidase, S54 family protein [Propionibacterium acnes HL043PA2]
gi|422491579|ref|ZP_16567890.1| peptidase, S54 family protein [Propionibacterium acnes HL086PA1]
gi|422500248|ref|ZP_16576504.1| peptidase, S54 family protein [Propionibacterium acnes HL063PA2]
gi|422511370|ref|ZP_16587513.1| peptidase, S54 family protein [Propionibacterium acnes HL059PA1]
gi|422515427|ref|ZP_16591539.1| peptidase, S54 family protein [Propionibacterium acnes HL110PA2]
gi|422517995|ref|ZP_16594067.1| peptidase, S54 family protein [Propionibacterium acnes HL074PA1]
gi|422520642|ref|ZP_16596684.1| peptidase, S54 family protein [Propionibacterium acnes HL045PA1]
gi|422523573|ref|ZP_16599585.1| peptidase, S54 family protein [Propionibacterium acnes HL053PA2]
gi|422526136|ref|ZP_16602135.1| peptidase, S54 family protein [Propionibacterium acnes HL083PA1]
gi|422528553|ref|ZP_16604535.1| peptidase, S54 family protein [Propionibacterium acnes HL053PA1]
gi|422531484|ref|ZP_16607432.1| peptidase, S54 family protein [Propionibacterium acnes HL110PA1]
gi|422536010|ref|ZP_16611918.1| peptidase, S54 family protein [Propionibacterium acnes HL078PA1]
gi|422538501|ref|ZP_16614375.1| peptidase, S54 family protein [Propionibacterium acnes HL013PA1]
gi|422541284|ref|ZP_16617142.1| peptidase, S54 family protein [Propionibacterium acnes HL037PA1]
gi|422543833|ref|ZP_16619673.1| peptidase, S54 family protein [Propionibacterium acnes HL082PA1]
gi|422546350|ref|ZP_16622177.1| peptidase, S54 family protein [Propionibacterium acnes HL050PA3]
gi|422550773|ref|ZP_16626570.1| peptidase, S54 family protein [Propionibacterium acnes HL050PA1]
gi|422557543|ref|ZP_16633286.1| peptidase, S54 family protein [Propionibacterium acnes HL025PA2]
gi|422559204|ref|ZP_16634932.1| peptidase, S54 family protein [Propionibacterium acnes HL005PA1]
gi|422562348|ref|ZP_16638026.1| peptidase, S54 family protein [Propionibacterium acnes HL046PA1]
gi|422570674|ref|ZP_16646269.1| peptidase, S54 family protein [Propionibacterium acnes HL067PA1]
gi|422578091|ref|ZP_16653620.1| peptidase, S54 family protein [Propionibacterium acnes HL005PA4]
gi|313765256|gb|EFS36620.1| peptidase, S54 family protein [Propionibacterium acnes HL013PA1]
gi|313772829|gb|EFS38795.1| peptidase, S54 family protein [Propionibacterium acnes HL074PA1]
gi|313793149|gb|EFS41216.1| peptidase, S54 family protein [Propionibacterium acnes HL110PA1]
gi|313802763|gb|EFS43981.1| peptidase, S54 family protein [Propionibacterium acnes HL110PA2]
gi|313810969|gb|EFS48683.1| peptidase, S54 family protein [Propionibacterium acnes HL083PA1]
gi|313815272|gb|EFS52986.1| peptidase, S54 family protein [Propionibacterium acnes HL059PA1]
gi|313828687|gb|EFS66401.1| peptidase, S54 family protein [Propionibacterium acnes HL063PA2]
gi|313831735|gb|EFS69449.1| peptidase, S54 family protein [Propionibacterium acnes HL007PA1]
gi|313834384|gb|EFS72098.1| peptidase, S54 family protein [Propionibacterium acnes HL056PA1]
gi|313840425|gb|EFS78139.1| peptidase, S54 family protein [Propionibacterium acnes HL086PA1]
gi|314916091|gb|EFS79922.1| peptidase, S54 family protein [Propionibacterium acnes HL005PA4]
gi|314917012|gb|EFS80843.1| peptidase, S54 family protein [Propionibacterium acnes HL050PA1]
gi|314921288|gb|EFS85119.1| peptidase, S54 family protein [Propionibacterium acnes HL050PA3]
gi|314931050|gb|EFS94881.1| peptidase, S54 family protein [Propionibacterium acnes HL067PA1]
gi|314954997|gb|EFS99403.1| peptidase, S54 family protein [Propionibacterium acnes HL027PA1]
gi|314959037|gb|EFT03139.1| peptidase, S54 family protein [Propionibacterium acnes HL002PA1]
gi|314964562|gb|EFT08662.1| peptidase, S54 family protein [Propionibacterium acnes HL082PA1]
gi|314969660|gb|EFT13758.1| peptidase, S54 family protein [Propionibacterium acnes HL037PA1]
gi|314974725|gb|EFT18820.1| peptidase, S54 family protein [Propionibacterium acnes HL053PA1]
gi|314977079|gb|EFT21174.1| peptidase, S54 family protein [Propionibacterium acnes HL045PA1]
gi|314985521|gb|EFT29613.1| peptidase, S54 family protein [Propionibacterium acnes HL005PA1]
gi|315078423|gb|EFT50454.1| peptidase, S54 family protein [Propionibacterium acnes HL053PA2]
gi|315082110|gb|EFT54086.1| peptidase, S54 family protein [Propionibacterium acnes HL078PA1]
gi|315097356|gb|EFT69332.1| peptidase, S54 family protein [Propionibacterium acnes HL038PA1]
gi|315099461|gb|EFT71437.1| peptidase, S54 family protein [Propionibacterium acnes HL059PA2]
gi|315102034|gb|EFT74010.1| peptidase, S54 family protein [Propionibacterium acnes HL046PA1]
gi|315110140|gb|EFT82116.1| peptidase, S54 family protein [Propionibacterium acnes HL030PA2]
gi|327331358|gb|EGE73097.1| membrane protein rhomboid family protein [Propionibacterium acnes
HL096PA2]
gi|327334864|gb|EGE76575.1| membrane protein rhomboid family protein [Propionibacterium acnes
HL097PA1]
gi|327447261|gb|EGE93915.1| peptidase, S54 family protein [Propionibacterium acnes HL043PA1]
gi|327449707|gb|EGE96361.1| peptidase, S54 family protein [Propionibacterium acnes HL043PA2]
gi|327456628|gb|EGF03283.1| peptidase, S54 family protein [Propionibacterium acnes HL083PA2]
gi|327457095|gb|EGF03750.1| peptidase, S54 family protein [Propionibacterium acnes HL092PA1]
gi|328756692|gb|EGF70308.1| peptidase, S54 family protein [Propionibacterium acnes HL025PA2]
gi|328761881|gb|EGF75391.1| membrane protein rhomboid family protein [Propionibacterium acnes
HL099PA1]
Length = 222
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 10/143 (6%)
Query: 65 YRFYTSIVFHG-SLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIAL 123
+RF TS+ H S+ H+ FNM AL LG LE +G R ++ L L+A
Sbjct: 47 WRFVTSMFGHALSIFHIGFNMYALWALGRSLEPFLGRARFLAAYLMSGLGGGALFCLMA- 105
Query: 124 LVAHIPFYRLQNVMDECAIGFSGVIFS----LIVIETSLSGAQSRSVFGLFNIPAKWYPL 179
A L NV D+ +G SG IF L++++ L GA +R ++ + I A
Sbjct: 106 -TADGGRAILPNV-DDGVVGASGAIFGLFGVLLIVQRRL-GASTRELWVVLAINAALLLF 162
Query: 180 ILLVLFQVLMTNVSLLGHLCGIL 202
I + +Q + L+G +CG++
Sbjct: 163 ISGIAWQAHLGGF-LVGMMCGVI 184
>gi|74317790|ref|YP_315530.1| hypothetical protein Tbd_1772 [Thiobacillus denitrificans ATCC
25259]
gi|74057285|gb|AAZ97725.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC
25259]
Length = 238
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 9/132 (6%)
Query: 22 IPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVL 81
+P TS ++++ ++Y + LL G D P F +++ T HGSLLH+
Sbjct: 42 MPSITSLLILLNISVYALALLTGPDIIRVFALWPPGSGGGFYLWQLVTYSFLHGSLLHLG 101
Query: 82 FNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECA 141
FNMLA+ G+ LE+ +R +L A+ + ++ H
Sbjct: 102 FNMLAIWMFGAALEKRWNDLRYLLTYLLSVIVAAMTQIAVSGYFLH---------ATGPV 152
Query: 142 IGFSGVIFSLIV 153
IG SG +F L++
Sbjct: 153 IGASGGVFGLLL 164
>gi|365890913|ref|ZP_09429395.1| conserved membrane hypothetical protein [Bradyrhizobium sp. STM
3809]
gi|365333220|emb|CCE01926.1| conserved membrane hypothetical protein [Bradyrhizobium sp. STM
3809]
Length = 264
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 18/116 (15%)
Query: 21 SIPFFTSAVVIVCGTIYLICLLFG-YDSF-----------YEICFL----PSAVISRFQV 64
S+P +A +++ I+L LL +DS+ Y++ L P ++F
Sbjct: 22 SLPGALTAYILLIAVIHLRVLLPDEWDSWIIDLFAFVPKRYDLTLLDGAFPGGTPAKFWT 81
Query: 65 YRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLL 120
+ Y+ + H +L H+ FN+L L+P GS L R G++R + + A A+ HL+
Sbjct: 82 FVSYS--LLHANLTHIGFNVLWLLPFGSALARRFGAIRFYLFMAVTAAGGALAHLI 135
>gi|323498065|ref|ZP_08103071.1| GlpG protein [Vibrio sinaloensis DSM 21326]
gi|323316873|gb|EGA69878.1| GlpG protein [Vibrio sinaloensis DSM 21326]
Length = 277
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 48/87 (55%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T ++++C I+ + L + + P+ V +Q++R+ + + H S+LH+ FN+L
Sbjct: 100 TLTLMMLCMVIFSLQQLGAGQAVFAALHFPAFVGQEWQLWRWISHALLHFSVLHIAFNLL 159
Query: 86 ALVPLGSELERIMGSVRMFYITILLAT 112
LG ++ER +GS ++ + ++ A
Sbjct: 160 WWWQLGGDIERRLGSTKVIQLFVVSAA 186
>gi|297746062|emb|CBI16118.3| unnamed protein product [Vitis vinifera]
Length = 316
Score = 45.1 bits (105), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 51/115 (44%), Gaps = 32/115 (27%)
Query: 56 SAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNA 115
S V+ R QV+R + I H + HVL NML+LV +G LE+ G VR I +L S
Sbjct: 48 SKVVHRHQVWRLISCIWLHAGVFHVLANMLSLVFIGIRLEQEFGFVR---IGLLYVVS-- 102
Query: 116 ILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLF 170
GF G + S + I++S+S S ++FGL
Sbjct: 103 ---------------------------GFGGSMLSSLFIQSSISVGASGALFGLL 130
>gi|237728739|ref|ZP_04559220.1| peptidase [Citrobacter sp. 30_2]
gi|226909361|gb|EEH95279.1| peptidase [Citrobacter sp. 30_2]
Length = 277
Score = 45.1 bits (105), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 32/158 (20%)
Query: 61 RFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLL 120
+F+ +R++T H SL+H+LFN+L LG +E+ +GS ++ IT++ A +
Sbjct: 132 KFEFWRYFTHAFMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITVISALLSG----- 186
Query: 121 IALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVI---------ETSLSGAQSRSVFGLFN 171
Y Q G SGV+++L+ ++ + + +F L
Sbjct: 187 ----------YVQQKFSGPWFGGLSGVVYALMGYVWLRGERDPQSGIFLQRGLIIFALIW 236
Query: 172 IPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTY 209
I A W+ LF + M N + H+ G+ G A +
Sbjct: 237 IVAGWFD-----LFGMSMANGA---HVAGLAVGLAMAF 266
>gi|260593421|ref|ZP_05858879.1| rhomboid family protein [Prevotella veroralis F0319]
gi|260534697|gb|EEX17314.1| rhomboid family protein [Prevotella veroralis F0319]
Length = 313
Score = 45.1 bits (105), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 19/157 (12%)
Query: 21 SIPFFTSAVVIVCGTIYLICLLFGY-----DSFYEICFLPSAVISRFQVYRFYTSIVFHG 75
+IP T ++I+ +++ +FG D+ + + ++ S S F V++F TS+ H
Sbjct: 3 NIPVVTRNLLIINVLVFVATYVFGVIGLDLDNLFGLFYIGS---SSFGVWQFLTSMFMHA 59
Query: 76 SLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQN 135
+++H+ NM L GS +E + GS + + I+ IL L +Y +
Sbjct: 60 NIMHIATNMFMLWMFGSVIEYVWGSRKFLFYYIICGIGGGILQEL--------AWYCMPF 111
Query: 136 VMDECAIGFSGV---IFSLIVIETSLSGAQSRSVFGL 169
VMD + +GV I S+I ++ +++ S +V GL
Sbjct: 112 VMDTITVTRNGVSIDIPSVIYLQQTMAIGASGAVVGL 148
>gi|261210188|ref|ZP_05924485.1| protein GlpG [Vibrio sp. RC341]
gi|260840728|gb|EEX67277.1| protein GlpG [Vibrio sp. RC341]
Length = 277
Score = 45.1 bits (105), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 25 FTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
FT ++ +C I+ + ++ + P+ ++Q++R+ + + H S++H+ FN+
Sbjct: 99 FTLLIMALCIIIFALQTFGAGEAIFSALHFPAQASQQWQIWRWVSHALLHFSVMHIAFNL 158
Query: 85 LALVPLGSELERIMGSV---RMFYITILLATSN 114
L G +LE+ +GSV ++F ++ +L+ +
Sbjct: 159 LWWWQFGGDLEQRLGSVTLIKLFLVSAILSGAG 191
>gi|449134320|ref|ZP_21769821.1| glpG protein [Rhodopirellula europaea 6C]
gi|448886950|gb|EMB17338.1| glpG protein [Rhodopirellula europaea 6C]
Length = 340
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%)
Query: 49 YEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITI 108
Y+ P I + +V+R T V HGS +H++FNM+ + LG +ER+ GS + ++
Sbjct: 185 YQKSNDPWVSIKKGEVWRIITPAVLHGSPMHLVFNMMWVYMLGGVIERLHGSWFLVFLMT 244
Query: 109 LLATSNAILHLLI 121
+ S I+ +++
Sbjct: 245 ITHVSGMIVQIVL 257
>gi|361127409|gb|EHK99378.1| putative Inactive rhomboid protein 1 [Glarea lozoyensis 74030]
Length = 302
Score = 45.1 bits (105), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 63 QVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITI 108
Q +RF I H ++H+ FNML + LG E+E I+GS+R F + I
Sbjct: 103 QWFRFIVPIFLHAGIIHIGFNMLLQMTLGREMEMIIGSIRYFLVYI 148
>gi|345881810|ref|ZP_08833320.1| hypothetical protein HMPREF9431_01984 [Prevotella oulorum F0390]
gi|343918469|gb|EGV29232.1| hypothetical protein HMPREF9431_01984 [Prevotella oulorum F0390]
Length = 320
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 78/188 (41%), Gaps = 25/188 (13%)
Query: 42 LFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSV 101
LF + ++ L + F Y+ +T + H H+LFNM L G LER+ G
Sbjct: 32 LFDFQDLEDMLGLHFFLAPHFHFYQIFTYMFVHAGFTHILFNMFGLWMFGPILERVWGGR 91
Query: 102 R--MFYITILLAT----SNAILHLLIALLVAHIPFYRLQNVM---DECA--------IGF 144
R +Y++ L A L A++ + +P + L N++ E +G
Sbjct: 92 RFLFYYLSCGLGAGLFQEAAQLVQFYAIMSSQVPHFALSNLLFYAQEAGAALNTWTTVGA 151
Query: 145 SGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLI----LLVLFQVLM---TNVSLLGH 197
SG IF +++ + R F P K L+ + L Q L NV+ L H
Sbjct: 152 SGSIFG-VLLGFGMLFPNERMFIIPFPFPIKAKYLVGGYAAVELLQALFMTGDNVAHLAH 210
Query: 198 LCGILSGF 205
+ G++ GF
Sbjct: 211 IGGMVIGF 218
>gi|422566077|ref|ZP_16641716.1| peptidase, S54 family protein [Propionibacterium acnes HL082PA2]
gi|314965321|gb|EFT09420.1| peptidase, S54 family protein [Propionibacterium acnes HL082PA2]
Length = 222
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 85/185 (45%), Gaps = 14/185 (7%)
Query: 27 SAVVIVCGTIYLICLLFGYDSFYEICFLPSAVIS---RF-QVYRFYTSIVFHG-SLLHVL 81
S V +V T+ IC L + + V++ RF + +RF TS+ H S+ H+
Sbjct: 5 SDVPVVTWTLIGICFLVWVGEWLSPQVGEAVVLAPRVRFTEPWRFVTSMFGHALSIFHIG 64
Query: 82 FNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECA 141
FNM AL LG LE +G R ++ L L+A A L NV D+
Sbjct: 65 FNMYALWALGRSLEPFLGRARFLAAYLMSGLGGGALFCLMA--TADGGRTILPNV-DDGV 121
Query: 142 IGFSGVIFS----LIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGH 197
+G SG IF L++++ L G +R ++ + I A I + +Q + L+G
Sbjct: 122 VGASGAIFGLFGVLLIVQRRL-GVSTRELWVVLAINAALLLFISGIAWQAHLGGF-LVGM 179
Query: 198 LCGIL 202
+CG++
Sbjct: 180 MCGVI 184
>gi|159470379|ref|XP_001693337.1| predicted protein [Chlamydomonas reinhardtii]
gi|158277595|gb|EDP03363.1| predicted protein [Chlamydomonas reinhardtii]
Length = 249
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 66/131 (50%), Gaps = 4/131 (3%)
Query: 79 HVLFNMLALVPLGSELERIMGSVRMFYITILLAT-SNAILHLLIALLVAHIPFYRLQNVM 137
H+ +NM +L+ G++LE G + L S+ + LL A L A P YR
Sbjct: 74 HLFYNMGSLLWKGAQLESRYGHWGFAALVAELLLLSHGLTALLAAALAAGFPGYRYL-YW 132
Query: 138 DECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILLVLFQVLMTNVSLLGH 197
D CA+GFS V+F+L V+ + + + S+ G F +P K+ LVL L +GH
Sbjct: 133 DTCAVGFSAVLFALKVV-LNYNQPGNSSIMG-FELPTKYLCWAELVLASYLTPQACFIGH 190
Query: 198 LCGILSGFAYT 208
L GIL+G +
Sbjct: 191 LGGILAGLGHV 201
>gi|153835509|ref|ZP_01988176.1| GlpG protein [Vibrio harveyi HY01]
gi|444428496|ref|ZP_21223822.1| peptidase [Vibrio campbellii CAIM 519 = NBRC 15631]
gi|148867922|gb|EDL67134.1| GlpG protein [Vibrio harveyi HY01]
gi|444238266|gb|ELU49881.1| peptidase [Vibrio campbellii CAIM 519 = NBRC 15631]
Length = 280
Score = 44.7 bits (104), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 26 TSAVVIVCGTIYLICLLFGY-DSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
T ++ VC IY + + FG+ D + + P+ ++Q++R+ + + H S+ H++FN+
Sbjct: 100 TLLIMAVCTVIYFLQM-FGFGDGVFALLHFPAFEGQQWQLWRWISHALLHFSVTHIVFNL 158
Query: 85 LALVPLGSELERIMGSVRMFYITILLAT 112
L LG ++ER + S ++ I ++ A
Sbjct: 159 LWWWQLGGDIERRLSSGKLLQIFLISAA 186
>gi|119720561|ref|YP_921056.1| rhomboid family protein [Thermofilum pendens Hrk 5]
gi|119525681|gb|ABL79053.1| Rhomboid family protein [Thermofilum pendens Hrk 5]
Length = 444
Score = 44.7 bits (104), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%)
Query: 52 CFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMF 104
F+P+ +YR +TS+ H +L H+ FNML L G +E ++GS R F
Sbjct: 52 AFVPAYFARPEHLYRLFTSMFLHANLAHIFFNMLYLYTFGKSVEAVLGSERYF 104
>gi|440285784|ref|YP_007338549.1| uncharacterized membrane protein [Enterobacteriaceae bacterium
strain FGI 57]
gi|440045306|gb|AGB76364.1| uncharacterized membrane protein [Enterobacteriaceae bacterium
strain FGI 57]
Length = 276
Score = 44.7 bits (104), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 47/86 (54%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T V+I C ++++ + G + P +F+ +R+++ + H S+LH+LFN+L
Sbjct: 97 TMTVMIACILVFVLMNVVGDQAVMMWLAWPYDSSVQFEAWRYFSHALMHFSVLHILFNLL 156
Query: 86 ALVPLGSELERIMGSVRMFYITILLA 111
LG +E+ +GS ++ IT + A
Sbjct: 157 WWWYLGGAVEKRIGSGKLVVITAISA 182
>gi|300725231|ref|YP_003714559.1| membrane protein, member of glp regulon [Xenorhabdus nematophila
ATCC 19061]
gi|297631776|emb|CBJ92495.1| putative membrane protein, member of glp regulon [Xenorhabdus
nematophila ATCC 19061]
Length = 282
Score = 44.7 bits (104), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 72/148 (48%), Gaps = 22/148 (14%)
Query: 62 FQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLI 121
+++R+ + V H SL H+LFN++ LGS++ER M + ++F ITI+ A + L
Sbjct: 135 LELWRWVSHAVLHFSLTHLLFNLVLWWYLGSQVERKMSAGKLFEITIVSAFFSGWAQSLF 194
Query: 122 ALLVAHIPFYRLQNVMDECAIGFSGVIFSLI---VIETSLSGAQSRSV-FGLFNIPAKWY 177
+ +H G SGV+++LI + LS + SV GL I W
Sbjct: 195 S--GSHFG-------------GLSGVVYALIGYVWLTGELSPKRGISVPRGLIAITVIW- 238
Query: 178 PLILLVLFQVLMTNVSLLGHLCGILSGF 205
+L+ F V N++ H+ G++ G
Sbjct: 239 --LLVGYFDVFPLNIANAAHVSGLIIGL 264
>gi|258650339|ref|YP_003199495.1| rhomboid family protein [Nakamurella multipartita DSM 44233]
gi|258553564|gb|ACV76506.1| Rhomboid family protein [Nakamurella multipartita DSM 44233]
Length = 292
Score = 44.7 bits (104), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 45 YDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMF 104
Y Y L A ++ + +R TS HG+L+H+ NML+L LG LERI+G RM
Sbjct: 92 YSELYLRGGLIPAEVASGEYWRLLTSGFLHGNLVHLATNMLSLYWLGIPLERILGRGRML 151
Query: 105 --YITILLATSNAIL 117
Y+ LL S ++L
Sbjct: 152 TIYLISLLGASVSVL 166
>gi|145220568|ref|YP_001131277.1| rhomboid family protein [Chlorobium phaeovibrioides DSM 265]
gi|145206732|gb|ABP37775.1| Rhomboid family protein [Chlorobium phaeovibrioides DSM 265]
Length = 271
Score = 44.7 bits (104), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 71/160 (44%), Gaps = 21/160 (13%)
Query: 57 AVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAI 116
A F++++ +T + HG H+ FNM AL G+E+E G+ + + AI
Sbjct: 52 AASENFRIWQPFTYMFMHGGTTHIFFNMFALWMFGAEIENYWGTKEFIWYYFVCGVGAAI 111
Query: 117 LHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKW 176
++ L+A P +G SG ++ +++ + + ++ LF I AK+
Sbjct: 112 IN-LVATTGTLYP-----------TVGASGAVYGILLAFGMMFPGRYIFLYFLFPIKAKY 159
Query: 177 Y-PLILLVLFQVLM--------TNVSLLGHLCGILSGFAY 207
+ L+ F + +N++ HL G+L GF Y
Sbjct: 160 FIAGFALIEFMSGLGSRTMGSGSNIAHFAHLGGMLIGFIY 199
>gi|334880686|emb|CCB81452.1| integral membrane protein [Lactobacillus pentosus MP-10]
gi|339636895|emb|CCC15711.1| integral membrane protein [Lactobacillus pentosus IG1]
Length = 227
Score = 44.7 bits (104), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 3/108 (2%)
Query: 13 TRANQWWESIPFFTSAVVIVCGTIYLICLLFGYDS---FYEICFLPSAVISRFQVYRFYT 69
TR +WW+ P T ++ + ++LI L G + F I + I+ Q +RF T
Sbjct: 2 TRIRRWWQMEPAITQIILGITVAVFLIEWLMGDGATLVFNAIGAKNNQAIAAGQWWRFIT 61
Query: 70 SIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAIL 117
+ H L H+ N + + +G ++E + G RM + +L S I+
Sbjct: 62 PMFLHMGLTHIALNGVVIYFMGMQIEAMYGHWRMLALYMLGGISGNIM 109
>gi|388602835|ref|ZP_10161231.1| peptidase [Vibrio campbellii DS40M4]
Length = 280
Score = 44.7 bits (104), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 26 TSAVVIVCGTIYLICLLFGY-DSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
T ++ VC IY + + FG+ D + + P+ ++Q++R+ + + H S+ H++FN+
Sbjct: 100 TLLIMAVCTVIYFLQM-FGFGDGVFALLHFPAFEGQQWQLWRWISHALLHFSVTHIVFNL 158
Query: 85 LALVPLGSELERIMGSVRMFYITILLAT 112
L LG ++ER + S ++ I ++ A
Sbjct: 159 LWWWQLGGDIERRLSSGKLLQIFLISAA 186
>gi|345022776|ref|ZP_08786389.1| hypothetical protein OTW25_15910 [Ornithinibacillus scapharcae
TW25]
Length = 254
Score = 44.7 bits (104), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 23/166 (13%)
Query: 45 YDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMF 104
++ Y++ +I + + +RF T I HG L+H+LFN +LV G LER++G MF
Sbjct: 41 FERLYDLGVGHHYMIHQGEYWRFITPIFLHGGLMHMLFNSFSLVLFGPALERMIGK-SMF 99
Query: 105 YITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAI-GFSGVIFSLIVIETSLSGAQS 163
I L A +L + + P + +V AI G G+ ++V SL +Q+
Sbjct: 100 LIAYLGA---GVLANITTFFIN--PSFMFPHVGASGAIFGLFGIYIFMVVFRKSLIDSQN 154
Query: 164 RSVFGLFNIPAKWYPLILLVLFQVLMT----NVSLLGHLCGILSGF 205
+ + ++ L ++MT ++ H+ G +GF
Sbjct: 155 AQI------------VTVIFLIGLIMTFIRPGINQYAHILGFAAGF 188
>gi|357400681|ref|YP_004912606.1| hypothetical protein SCAT_3097 [Streptomyces cattleya NRRL 8057 =
DSM 46488]
gi|386356736|ref|YP_006054982.1| hypothetical protein SCATT_30890 [Streptomyces cattleya NRRL 8057 =
DSM 46488]
gi|337767090|emb|CCB75801.1| conserved membrane protein of unknown function [Streptomyces
cattleya NRRL 8057 = DSM 46488]
gi|365807244|gb|AEW95460.1| hypothetical protein SCATT_30890 [Streptomyces cattleya NRRL 8057 =
DSM 46488]
Length = 282
Score = 44.7 bits (104), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 55 PSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSN 114
P++ ++ Q YR T+ H +++H+ FNML+L +G LE +G VR + +L A
Sbjct: 108 PTSGVAEGQWYRLLTATFLHQNVMHIGFNMLSLWWIGPGLEVALGRVRFLAVYLLSALGG 167
Query: 115 AILHLLIA 122
+ L L+A
Sbjct: 168 SALSFLLA 175
>gi|429738728|ref|ZP_19272519.1| peptidase, S54 family [Prevotella saccharolytica F0055]
gi|429159303|gb|EKY01819.1| peptidase, S54 family [Prevotella saccharolytica F0055]
Length = 307
Score = 44.7 bits (104), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 29/212 (13%)
Query: 21 SIPFFTSAVVIVCGTIYLICLLF----GYDSFYEICFLPSAVISRFQVYRFYTSIVFHGS 76
+IP T ++I+ YL ++ G D ++ L + S F+ Y+ T + HG
Sbjct: 3 NIPTVTKNLLIINVLAYLAMVVLKSAIGID-LNDLLGLHFFMASDFRAYQLVTYMFMHGG 61
Query: 77 LLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQ-- 134
L H+ FNM AL G +E + G+ + + I ++ L + ++ F
Sbjct: 62 LTHIFFNMFALWMFGVVVEGVWGAKKFLFYYITCGVGAGLMQELAQFVEIYMNFNAKTPI 121
Query: 135 ------NVMDECA--------IGFSGVIFSLIVIETSLSGAQSRSVFGLFNIP--AKWYP 178
VM A +G SG I+++++ + VF F IP AKW+
Sbjct: 122 SISEAFTVMHHYAAQLNGLTTVGASGAIYAILLAFGMIFPENKIFVFP-FPIPIKAKWFV 180
Query: 179 LIL--LVLFQVLM---TNVSLLGHLCGILSGF 205
+I + L+ + NV+ L HL G++ GF
Sbjct: 181 MIYAAIELYSAMTGAGGNVAHLAHLGGMIFGF 212
>gi|392945858|ref|ZP_10311500.1| putative membrane protein [Frankia sp. QA3]
gi|392289152|gb|EIV95176.1| putative membrane protein [Frankia sp. QA3]
Length = 341
Score = 44.7 bits (104), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Query: 63 QVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATS---NAILHL 119
Q YR T+ H +LH+LFNM AL LG +LE I+G R Y+ + +A + N + +L
Sbjct: 178 QYYRLLTAAFLHAGVLHILFNMYALYLLGFQLEAILGRAR--YLGLFVAGAVGGNTLSYL 235
Query: 120 LIALLVAHI 128
L L A +
Sbjct: 236 LGGLSTASV 244
>gi|257067425|ref|YP_003153680.1| membrane protein [Brachybacterium faecium DSM 4810]
gi|256558243|gb|ACU84090.1| uncharacterized membrane protein [Brachybacterium faecium DSM 4810]
Length = 305
Score = 44.7 bits (104), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 75/190 (39%), Gaps = 47/190 (24%)
Query: 62 FQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLI 121
F + F+T+ HG +LH+ NM AL +G LE+ +G VR + L
Sbjct: 121 FMPWTFFTAGFLHGGILHLALNMYALWIVGQYLEQTLGHVRYAAV------------FLT 168
Query: 122 ALLVAHIPFYRLQNVMDEC----AIGFSGVIFSL----IVIETSLSGAQSRSVFGL---- 169
A+L H Y L + + +G SG +F L ++ L G ++ V +
Sbjct: 169 AVLGGHTAVYLLADPLSSAWITGTLGASGGVFGLFAAMFIVNRHLGGQTAQIVVLIVLNL 228
Query: 170 ---FNIPAKWYPLILLVLFQVLMTNVSLLGHLCGILSGFAYTYGFFNL---LMPGTSFYS 223
F IP +S GHL G++ G A T G F L PG +
Sbjct: 229 VLTFTIP-----------------GISWQGHLGGLVIGAAVTAGMFALRPKAGPGADRQA 271
Query: 224 AIESSSLLST 233
S+L+ +
Sbjct: 272 LARRSALVHS 281
>gi|262199505|ref|YP_003270714.1| rhomboid family protein [Haliangium ochraceum DSM 14365]
gi|262082852|gb|ACY18821.1| Rhomboid family protein [Haliangium ochraceum DSM 14365]
Length = 332
Score = 44.7 bits (104), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 65/145 (44%), Gaps = 18/145 (12%)
Query: 63 QVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIA 122
+ +RF TS++ HG ++H+ FN+ AL +G E+I G +Y +L + + L +
Sbjct: 158 EWWRFATSVLLHGGIMHLAFNLYALAMVGPLTEKIYGR---WYTLLLFLLTGVLASLGSS 214
Query: 123 LLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSV-FGLFNIPAKWYPLIL 181
L + AIG SG I LI + T+ Q + L N +W +++
Sbjct: 215 ALRS-----------GGVAIGASGAIMGLIGVATAWGHRQGTTASRALRNGMLRWALMVM 263
Query: 182 LVLFQVLMTNVSLLGHLCGILSGFA 206
+ F + NV+ H G +G
Sbjct: 264 IFGFFINADNVA---HGVGFATGLG 285
>gi|416894475|ref|ZP_11925063.1| Rhomboid family protein [Aggregatibacter aphrophilus ATCC 33389]
gi|347813437|gb|EGY30110.1| Rhomboid family protein [Aggregatibacter aphrophilus ATCC 33389]
Length = 289
Score = 44.7 bits (104), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 68/153 (44%), Gaps = 23/153 (15%)
Query: 26 TSAVVIVCGTIYLICLLFGYDS-FYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNM 84
T V +C +YL+ +LFG+D + P +++R+ T + H S +H+LFN+
Sbjct: 110 TVIVTALCVVVYLL-MLFGFDEPIFLAAHFPEDSAQEGEIWRYLTHTLVHLSNMHILFNL 168
Query: 85 LALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECA-IG 143
G +ER +GS+++ I + + I QN++ A G
Sbjct: 169 TWWWVFGGAIERQLGSLKLLQIYLFAGVISGI----------------AQNIVSGPAFFG 212
Query: 144 FSGVIFSLIVIETSLSGAQSRSVF----GLFNI 172
SGV+++++ L ++ F G FN+
Sbjct: 213 LSGVVYAVLGYVFVLDKVNKQTHFELPDGFFNM 245
>gi|302552712|ref|ZP_07305054.1| rhomboid family protein [Streptomyces viridochromogenes DSM 40736]
gi|302470330|gb|EFL33423.1| rhomboid family protein [Streptomyces viridochromogenes DSM 40736]
Length = 296
Score = 44.7 bits (104), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 69/166 (41%), Gaps = 28/166 (16%)
Query: 53 FLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLAT 112
+ P+ ++ + YR TS+ H + H+ FNML+L LG LE +G VR + ++
Sbjct: 121 YAPTQGVAGGEWYRMVTSMFTHQEIWHIAFNMLSLWWLGGPLEAALGRVRYLALYLVSGL 180
Query: 113 SNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNI 172
+ + L L+A + +G SG IF L L + +
Sbjct: 181 AGSALAYLLA-------------SPNTATLGASGAIFGLFGATAVL----------MRRL 217
Query: 173 PAKWYPLILLVLFQVLMT-----NVSLLGHLCGILSGFAYTYGFFN 213
P+I L+ ++ T N+S H+ G+++G Y +
Sbjct: 218 NYDMRPIIALLAINLIFTFSPGFNISWQAHIGGLVAGVVIGYAMVH 263
>gi|118376161|ref|XP_001021263.1| hypothetical protein TTHERM_00777280 [Tetrahymena thermophila]
gi|89303030|gb|EAS01018.1| hypothetical protein TTHERM_00777280 [Tetrahymena thermophila
SB210]
Length = 398
Score = 44.7 bits (104), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 87/180 (48%), Gaps = 21/180 (11%)
Query: 16 NQWWESIPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHG 75
+WW ++PF + + V ++ + + G Y+ + I RFQV+R +T+ F
Sbjct: 18 KRWWTTVPFGSKLIYYVTLGLFFLNMFTGV---YKYLYNSPDFILRFQVWRMFTT-QFVD 73
Query: 76 SLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLL--IALLVAHIPFYRL 133
L+ +F +L+L LER +G+V F + + N ++ LL I L++ ++ F
Sbjct: 74 ELMGTIFGLLSLTFTAIALERSIGTV-TFILDFMF--KNFLIQLLNFIILIMLNLAFKTG 130
Query: 134 QNVMDECAIGFSGVIFSLIVIETSL---SGAQSRSVFGLF--NIPAKWYPLILLVLFQVL 188
N+ S +F+++++ SL S ++ S F F I K+ P +L+ F +L
Sbjct: 131 TNIP-------SFGLFNIVILYMSLRCFSDPETSSNFMCFPIQIKNKFQPFAILLFFTLL 183
>gi|255635820|gb|ACU18258.1| unknown [Glycine max]
Length = 239
Score = 44.7 bits (104), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 14/95 (14%)
Query: 58 VISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAIL 117
V++R Q +R +T I H ++H+L NML+LV +G LE+ G +++ I ++ ++L
Sbjct: 110 VVNRHQGWRLFTCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFIKIGIIYLVSGFGGSVL 169
Query: 118 HLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLI 152
L + D ++G SG +F L+
Sbjct: 170 SSLF--------------IRDHISVGASGALFGLL 190
>gi|367470265|ref|ZP_09469978.1| Rhomboid family protein [Patulibacter sp. I11]
gi|365814662|gb|EHN09847.1| Rhomboid family protein [Patulibacter sp. I11]
Length = 254
Score = 44.7 bits (104), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 48 FYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVR--MFY 105
Y L ++ +++R T H LLH+ FNML L LG+E+ER +GS R + Y
Sbjct: 63 LYRNGVLFGPLVHDGELWRLVTGGFLHSGLLHIGFNMLLLYWLGTEIERRLGSFRFGLVY 122
Query: 106 ITILLATS 113
+T LL S
Sbjct: 123 LTALLGGS 130
>gi|386070828|ref|YP_005985724.1| peptidase, S54 (rhomboid) family protein [Propionibacterium acnes
ATCC 11828]
gi|422389739|ref|ZP_16469836.1| membrane protein rhomboid family protein [Propionibacterium acnes
HL103PA1]
gi|422458096|ref|ZP_16534754.1| peptidase, S54 family protein [Propionibacterium acnes HL050PA2]
gi|422463766|ref|ZP_16540379.1| peptidase, S54 family protein [Propionibacterium acnes HL060PA1]
gi|422466902|ref|ZP_16543464.1| peptidase, S54 family protein [Propionibacterium acnes HL110PA4]
gi|422468642|ref|ZP_16545173.1| peptidase, S54 family protein [Propionibacterium acnes HL110PA3]
gi|422576868|ref|ZP_16652405.1| peptidase, S54 family protein [Propionibacterium acnes HL001PA1]
gi|314922373|gb|EFS86204.1| peptidase, S54 family protein [Propionibacterium acnes HL001PA1]
gi|314982598|gb|EFT26690.1| peptidase, S54 family protein [Propionibacterium acnes HL110PA3]
gi|315091121|gb|EFT63097.1| peptidase, S54 family protein [Propionibacterium acnes HL110PA4]
gi|315094207|gb|EFT66183.1| peptidase, S54 family protein [Propionibacterium acnes HL060PA1]
gi|315104863|gb|EFT76839.1| peptidase, S54 family protein [Propionibacterium acnes HL050PA2]
gi|327329266|gb|EGE71026.1| membrane protein rhomboid family protein [Propionibacterium acnes
HL103PA1]
gi|353455194|gb|AER05713.1| peptidase, S54 (rhomboid) family protein [Propionibacterium acnes
ATCC 11828]
Length = 222
Score = 44.7 bits (104), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 10/143 (6%)
Query: 65 YRFYTSIVFHG-SLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIAL 123
+RF TS+ H S+ H+ FNM AL LG LE +G R ++ L L+A
Sbjct: 47 WRFVTSMFGHALSIFHIGFNMYALWALGRSLEPFLGRARFLAAYLMSGLGGGALFCLMA- 105
Query: 124 LVAHIPFYRLQNVMDECAIGFSGVIFS----LIVIETSLSGAQSRSVFGLFNIPAKWYPL 179
A L NV D+ +G SG IF L++++ L G +R ++ + I A
Sbjct: 106 -TADGGRTILPNV-DDGVVGASGAIFGLFGVLLIVQRRL-GVSTRELWVVLAINAALLLF 162
Query: 180 ILLVLFQVLMTNVSLLGHLCGIL 202
I + +Q + L+G +CG++
Sbjct: 163 ISGIAWQAHLGGF-LVGMMCGVI 184
>gi|312884405|ref|ZP_07744110.1| thiosulfate sulfurtransferase GlpG [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309367927|gb|EFP95474.1| thiosulfate sulfurtransferase GlpG [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 265
Score = 44.7 bits (104), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 49/87 (56%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T ++ +C ++L+ + + + PS ++Q++R+++ + H S LH+ FN+L
Sbjct: 89 TLTIMSLCVVVFLLQQINLNHFAFNLLHFPSVDGEQWQIWRWFSHALLHFSFLHITFNLL 148
Query: 86 ALVPLGSELERIMGSVRMFYITILLAT 112
LGS++E+ +G R+ + ++ A+
Sbjct: 149 WWWQLGSDIEQKLGGRRLLILFVVSAS 175
>gi|452819642|gb|EME26697.1| rhomboid family protein [Galdieria sulphuraria]
Length = 371
Score = 44.7 bits (104), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 71/168 (42%), Gaps = 36/168 (21%)
Query: 56 SAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNA 115
+ +IS Q+YR T I HG++ H++ N +L LG +ER GS R I L +
Sbjct: 194 NELISSGQLYRLLTPIFLHGNIAHLMVNCYSLYSLGPVVERCFGSHRF----IGLYLFSG 249
Query: 116 ILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLI-------VIETSLSGAQSRSVFG 168
+ + + P ++G SG IF L+ L G SR G
Sbjct: 250 FFGCIASFFFSKNP-----------SLGASGAIFGLVGGFAVYLKRHQYLLGETSR--LG 296
Query: 169 LFNIPAKWYPLILLVLFQVLM-----TNVSLLGHLCGILSGFAYTYGF 211
LF+I ++F +LM + + GHL G L G Y+Y F
Sbjct: 297 LFSIAQS-------LIFNILMSLQRGSRIDNWGHLGGFLGGVFYSYLF 337
>gi|378973504|ref|YP_005222110.1| rhomboid family protein [Treponema pallidum subsp. pertenue str.
SamoaD]
gi|374677829|gb|AEZ58122.1| rhomboid family protein [Treponema pallidum subsp. pertenue str.
SamoaD]
Length = 208
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 86/189 (45%), Gaps = 20/189 (10%)
Query: 26 TSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVISRFQVYRFYTSIVFHGSLLHVLFNML 85
T ++V+ G +++I L Y + +P V ++ +T H + H+LFNML
Sbjct: 16 TLSLVLANGAVFVITSLVESLGIY-LALVPGLVRYHRMYWQIFTYQFVHSGVWHLLFNML 74
Query: 86 ALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFS 145
LV G +E+ MGS M +L+ T Y ++ +G S
Sbjct: 75 GLVFFGQTIEKKMGSSEMLLFYLLVGTLCG---------AGACAAYLCVGRLNVLLLGAS 125
Query: 146 GVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLILL--VLFQVL-----MTNVSLLGHL 198
G IF+++ + + + ++G+ IPA PL+++ +LF++ N+S L HL
Sbjct: 126 GSIFAILFLFSVMFPTALIYLWGVIPIPA---PLLIVGYILFEIFDLFFSRDNLSHLTHL 182
Query: 199 CGILSGFAY 207
G+L + Y
Sbjct: 183 LGVLFAWGY 191
>gi|285019203|ref|YP_003376914.1| hypothetical protein XALc_2443 [Xanthomonas albilineans GPE PC73]
gi|283474421|emb|CBA16922.1| hypothetical uncharacterized membrane protein [Xanthomonas
albilineans GPE PC73]
Length = 218
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 60/139 (43%), Gaps = 14/139 (10%)
Query: 22 IPFFTSAVVIVCGTIYLICLLFGYDSFYEICFLPSAVIS------RFQVYRFYTSIVFHG 75
+P T A++I ++L+ + G +F P FQ+++ T HG
Sbjct: 5 LPPVTQALLIGNVVVFLLQISLGTATFAPFMLWPIGSFDPFSSGQNFQIWQLLTYAFLHG 64
Query: 76 SLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLIALLVAHIPFYRLQN 135
H+LFNMLAL G LE+ G+ R ++ + LL+ ++ L+N
Sbjct: 65 GFSHLLFNMLALYMFGGPLEQTWGNKRFLTYYLVCVAGAGLCQLLVG-------WWMLRN 117
Query: 136 -VMDECAIGFSGVIFSLIV 153
+G SG IF L++
Sbjct: 118 GSAPYPTLGASGGIFGLLL 136
>gi|189501441|ref|YP_001960911.1| rhomboid family protein [Chlorobium phaeobacteroides BS1]
gi|189496882|gb|ACE05430.1| Rhomboid family protein [Chlorobium phaeobacteroides BS1]
Length = 273
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 68/156 (43%), Gaps = 23/156 (14%)
Query: 62 FQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNAILHLLI 121
FQ+++ T + HG H+LFNM AL G+E+E G+ + A+L+LL
Sbjct: 59 FQLWQLITYMFMHGGFAHILFNMFALWLFGAEIENYWGTKEFTTYYFVCGIGAALLNLLT 118
Query: 122 ALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQSRSVFGLFNIPAKWYPLIL 181
+ +G SG +F +++ + + ++ LF + AK++ +
Sbjct: 119 TAGSQY------------PTVGASGAVFGILLAFGMMFPDRYIYLYFLFPVKAKYF-VAG 165
Query: 182 LVLFQVLM----------TNVSLLGHLCGILSGFAY 207
++LM +N++ HL G+L G Y
Sbjct: 166 YAGIELLMGINNSTMGSGSNIAHFAHLGGMLVGLVY 201
>gi|91204092|emb|CAJ71745.1| similar to rhomboid protein (intramembrane serine protease)
[Candidatus Kuenenia stuttgartiensis]
Length = 288
Score = 44.7 bits (104), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 77/171 (45%), Gaps = 23/171 (13%)
Query: 46 DSFYEICFL-PSAVISRFQVYRFYTSIVFHGSL--LHVLFNMLALVPLGSELERIMGSVR 102
D F ++ +L P I ++F++ + H + H++FNML L GSE+E+++G +
Sbjct: 66 DKFTKMFWLYPPDAIGNLWFWQFFSYMFLHSTTDPWHLIFNMLVLWMFGSEVEKVLGQKK 125
Query: 103 MFYITILLATSNAILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSLIVIETSLSGAQ 162
L T+ + + +P +G SG IF+ I + ++
Sbjct: 126 FL---TLYFTAGIFAGICCCIFTPKVPI-----------LGASGAIFA-IEVAFAMYFPN 170
Query: 163 SRSVFGLFNIPAKWYPLIL--LVLFQVLMT---NVSLLGHLCGILSGFAYT 208
S +F F I AK+ +I + +F + N++ HL G++ GF +
Sbjct: 171 SMVIFYFFPIRAKYLVMIFASITVFNCITPRGGNIAHFAHLGGLVYGFLFV 221
>gi|374609055|ref|ZP_09681852.1| Rhomboid family protein [Mycobacterium tusciae JS617]
gi|373552795|gb|EHP79398.1| Rhomboid family protein [Mycobacterium tusciae JS617]
Length = 282
Score = 44.7 bits (104), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 68/153 (44%), Gaps = 22/153 (14%)
Query: 56 SAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNA 115
S ++ + YR TS H + H+LFNM AL +G LE +G +R + A +
Sbjct: 100 SPAVADGEWYRLLTSAFLHYGVTHILFNMWALYVVGPPLEAALGRLRFIGLYFTSALGGS 159
Query: 116 ILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSL----IVIETSLSGAQSRSVFGLFN 171
+L L++ L A G SG IF L V+ L+ R V GL
Sbjct: 160 VLVYLLSSLGAQTA-------------GASGAIFGLFGATFVVGKRLN-LDVRWVIGLIA 205
Query: 172 IPAKWYPLILLVLFQVLMTNVSLLGHLCGILSG 204
+ + +I LV Q N+S GH+ G+++G
Sbjct: 206 LNMAFTFVIPLVSSQ----NISWQGHIGGLVTG 234
>gi|393199141|ref|YP_006460983.1| membrane protein [Solibacillus silvestris StLB046]
gi|406666244|ref|ZP_11074012.1| Rhomboid protease gluP [Bacillus isronensis B3W22]
gi|327438472|dbj|BAK14837.1| uncharacterized membrane protein [Solibacillus silvestris StLB046]
gi|405385783|gb|EKB45214.1| Rhomboid protease gluP [Bacillus isronensis B3W22]
Length = 207
Score = 44.7 bits (104), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 56 SAVISRFQVYRFYTSIVFHGSLLHVLFNMLALVPLGSELERIMGSVRMFYITILLATSNA 115
+ +I+ + +R TS+ H +HVLFNM +L G ELE+I G +R I L
Sbjct: 49 NGLIAAGEWWRIITSMFLHAGFMHVLFNMFSLFLFGPELEKIAGKMRFLTIYFL------ 102
Query: 116 ILHLLIALLVAHIPFYRLQNVMDECAIGFSGVIFSL------IVIETSLSGAQSRSVFGL 169
A + Y Q+ ++G SG ++ + +V T Q R +
Sbjct: 103 ------AGIFGVAATYATQDAY-YASVGASGALYGIFGAFGALVYYTRHLFPQLRQII-- 153
Query: 170 FNIPAKWYPLILLVLFQVLMT-NVSLLGHLCGILSGFAYTYGFFN 213
PLI++ + +T N+++ HL G+++GF +FN
Sbjct: 154 -------LPLIVISIIMTFLTPNINIAAHLGGLVTGFILGVVYFN 191
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.325 0.139 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,851,217,414
Number of Sequences: 23463169
Number of extensions: 240884231
Number of successful extensions: 820249
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1674
Number of HSP's successfully gapped in prelim test: 2116
Number of HSP's that attempted gapping in prelim test: 816736
Number of HSP's gapped (non-prelim): 4034
length of query: 381
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 237
effective length of database: 8,980,499,031
effective search space: 2128378270347
effective search space used: 2128378270347
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 78 (34.7 bits)