Query 016891
Match_columns 381
No_of_seqs 140 out of 1550
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 05:30:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016891.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016891hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4asc_A Kelch repeat and BTB do 99.4 9.1E-11 3.1E-15 107.4 25.8 220 120-365 68-303 (315)
2 2xn4_A Kelch-like protein 2; s 99.4 1.4E-10 4.9E-15 105.4 25.7 202 118-344 76-283 (302)
3 3ii7_A Kelch-like protein 7; p 99.4 1.1E-10 3.9E-15 106.3 24.6 213 108-344 54-279 (306)
4 1zgk_A Kelch-like ECH-associat 99.4 2.3E-10 8E-15 104.4 25.9 200 119-344 90-294 (308)
5 2woz_A Kelch repeat and BTB do 99.4 1.2E-10 4E-15 106.8 23.4 199 121-343 80-293 (318)
6 3ii7_A Kelch-like protein 7; p 99.4 7.6E-11 2.6E-15 107.4 21.3 225 118-369 23-257 (306)
7 2vpj_A Kelch-like protein 12; 99.3 3.7E-10 1.3E-14 102.5 24.4 201 118-344 77-285 (301)
8 2xn4_A Kelch-like protein 2; s 99.3 4.4E-10 1.5E-14 102.1 21.9 225 119-369 30-261 (302)
9 2vpj_A Kelch-like protein 12; 99.3 1.1E-09 3.9E-14 99.3 23.6 225 118-368 30-262 (301)
10 1zgk_A Kelch-like ECH-associat 99.3 3.6E-10 1.2E-14 103.1 19.1 226 118-368 38-271 (308)
11 2uvk_A YJHT; unknown function, 99.2 1.4E-09 4.7E-14 101.2 22.3 240 109-369 19-326 (357)
12 4asc_A Kelch repeat and BTB do 99.2 9.6E-10 3.3E-14 100.5 20.9 226 119-367 13-251 (315)
13 2woz_A Kelch repeat and BTB do 99.1 8.6E-09 2.9E-13 94.3 19.9 227 120-369 25-263 (318)
14 1fs1_A SKP2 F-BOX, cyclin A/CD 99.1 1.8E-11 6.2E-16 80.6 0.2 42 1-42 9-50 (53)
15 2uvk_A YJHT; unknown function, 99.0 2.8E-08 9.7E-13 92.3 21.8 205 119-343 86-348 (357)
16 2e31_A FBS1, F-box only protei 99.0 6E-11 2.1E-15 105.8 1.1 48 1-48 51-99 (297)
17 2ovr_B FBW7, F-BOX/WD repeat p 99.0 8E-07 2.7E-11 84.8 28.7 286 1-338 19-311 (445)
18 2zwa_A Leucine carboxyl methyl 98.9 2.4E-08 8.3E-13 101.2 17.5 206 118-346 411-644 (695)
19 3v7d_B Cell division control p 98.8 3.1E-06 1.1E-10 80.9 27.9 43 2-44 16-59 (464)
20 1p22_A F-BOX/WD-repeat protein 98.8 2.5E-07 8.4E-12 88.2 19.1 289 2-338 12-328 (435)
21 2zwa_A Leucine carboxyl methyl 98.4 6.9E-06 2.4E-10 83.2 17.2 182 175-368 412-616 (695)
22 1k3i_A Galactose oxidase precu 98.4 3.2E-06 1.1E-10 85.2 13.9 228 105-344 249-504 (656)
23 1k3i_A Galactose oxidase precu 98.2 4.6E-06 1.6E-10 84.0 11.2 205 120-344 220-448 (656)
24 3l2o_B F-box only protein 4; s 97.9 1E-06 3.4E-11 77.8 -1.0 49 2-50 6-54 (312)
25 2ast_B S-phase kinase-associat 97.4 2.5E-05 8.4E-10 71.5 -0.3 40 1-40 9-48 (336)
26 2p1m_B Transport inhibitor res 96.7 0.00018 6E-09 71.2 -0.9 34 1-34 6-40 (594)
27 3ogk_B Coronatine-insensitive 96.2 0.00062 2.1E-08 67.2 -0.9 33 2-34 14-47 (592)
28 3mbr_X Glutamine cyclotransfer 95.9 0.27 9.3E-06 42.3 14.5 114 205-345 27-142 (243)
29 1l0q_A Surface layer protein; 95.7 1.2 4E-05 40.5 20.1 182 111-338 3-192 (391)
30 3dsm_A Uncharacterized protein 95.6 1.2 4.1E-05 39.8 20.4 199 109-338 2-215 (328)
31 3nol_A Glutamine cyclotransfer 95.0 0.36 1.2E-05 42.0 12.4 113 206-345 50-164 (262)
32 3ei3_B DNA damage-binding prot 95.0 2 6.7E-05 38.9 20.7 190 111-338 88-285 (383)
33 2iwa_A Glutamine cyclotransfer 94.6 0.73 2.5E-05 40.3 13.5 112 209-346 32-145 (266)
34 1gxr_A ESG1, transducin-like e 94.0 2.9 0.0001 36.5 22.2 193 109-343 62-261 (337)
35 3nok_A Glutaminyl cyclase; bet 93.7 0.66 2.3E-05 40.4 11.1 111 206-346 62-174 (268)
36 1l0q_A Surface layer protein; 93.3 4.5 0.00015 36.5 20.2 187 109-338 85-278 (391)
37 3g4e_A Regucalcin; six bladed 93.2 4 0.00014 35.6 21.2 199 109-346 24-239 (297)
38 3dsm_A Uncharacterized protein 93.1 4.4 0.00015 36.0 21.2 190 108-338 52-256 (328)
39 3hfq_A Uncharacterized protein 93.1 4.4 0.00015 35.9 16.9 142 175-338 18-175 (347)
40 3scy_A Hypothetical bacterial 93.1 2 6.8E-05 38.6 14.1 105 226-343 234-345 (361)
41 4aez_A CDC20, WD repeat-contai 92.6 5.9 0.0002 36.1 20.6 195 105-338 99-296 (401)
42 4e54_B DNA damage-binding prot 92.4 1.6 5.3E-05 40.7 12.7 194 109-338 131-330 (435)
43 1ri6_A Putative isomerase YBHE 92.4 2.8 9.6E-05 36.8 14.0 138 175-338 60-214 (343)
44 3bws_A Protein LP49; two-domai 92.4 6.5 0.00022 35.9 19.0 201 107-338 178-393 (433)
45 3jro_A Fusion protein of prote 92.2 8.3 0.00028 38.8 18.7 185 117-337 29-240 (753)
46 1npe_A Nidogen, entactin; glyc 92.1 5.1 0.00018 34.2 22.2 192 105-338 43-241 (267)
47 2z2n_A Virginiamycin B lyase; 92.1 5.3 0.00018 34.2 20.3 191 104-338 104-298 (299)
48 1q7f_A NHL, brain tumor CG1071 91.7 5.8 0.0002 34.0 25.3 203 107-345 38-246 (286)
49 3hfq_A Uncharacterized protein 91.6 6.8 0.00023 34.6 23.0 148 175-344 162-326 (347)
50 3sjl_D Methylamine dehydrogena 91.4 2.1 7.2E-05 39.5 11.9 122 208-349 237-376 (386)
51 3no2_A Uncharacterized protein 91.3 6.7 0.00023 34.0 15.4 187 110-338 6-198 (276)
52 4gga_A P55CDC, cell division c 91.1 9.1 0.00031 35.1 21.7 202 101-338 107-313 (420)
53 3bws_A Protein LP49; two-domai 90.6 10 0.00034 34.6 20.1 193 109-338 133-337 (433)
54 3dwl_C Actin-related protein 2 90.4 4.5 0.00015 36.2 13.3 183 117-338 31-239 (377)
55 3q7m_A Lipoprotein YFGL, BAMB; 89.9 11 0.00036 33.9 16.9 129 175-338 198-340 (376)
56 1yfq_A Cell cycle arrest prote 89.0 11 0.00037 32.9 19.5 188 111-338 71-285 (342)
57 2mad_H Methylamine dehydrogena 88.4 8 0.00027 35.3 13.4 69 260-338 278-353 (373)
58 2hqs_A Protein TOLB; TOLB, PAL 88.4 15 0.00052 33.7 23.9 185 119-343 203-393 (415)
59 3m0c_C LDL receptor, low-densi 88.4 23 0.0008 35.9 28.2 160 175-363 493-657 (791)
60 3u4y_A Uncharacterized protein 88.2 12 0.00042 32.5 18.3 187 109-338 9-210 (331)
61 2aq5_A Coronin-1A; WD40 repeat 87.4 16 0.00056 33.0 23.3 201 110-344 95-308 (402)
62 3q7m_A Lipoprotein YFGL, BAMB; 87.3 16 0.00055 32.7 19.3 190 104-338 98-299 (376)
63 3jrp_A Fusion protein of prote 87.0 15 0.00053 32.3 22.7 191 111-337 25-242 (379)
64 1p22_A F-BOX/WD-repeat protein 86.2 20 0.00069 32.8 20.2 133 175-338 276-417 (435)
65 4a11_B DNA excision repair pro 85.7 19 0.00065 32.1 19.8 191 116-338 63-279 (408)
66 3v65_B Low-density lipoprotein 84.8 23 0.00078 32.3 25.1 211 106-362 124-342 (386)
67 3vgz_A Uncharacterized protein 84.7 20 0.00067 31.4 24.6 200 105-338 96-306 (353)
68 1rwi_B Serine/threonine-protei 84.7 17 0.00057 30.5 18.8 190 107-338 75-267 (270)
69 1k8k_C P40, ARP2/3 complex 41 84.5 21 0.0007 31.4 22.0 190 112-338 23-236 (372)
70 3zwl_B Eukaryotic translation 84.5 20 0.00069 31.3 21.4 67 260-338 186-252 (369)
71 2dg1_A DRP35, lactonase; beta 84.0 21 0.00071 31.1 14.4 119 208-343 55-177 (333)
72 3v9f_A Two-component system se 84.0 38 0.0013 34.0 21.2 192 109-343 417-617 (781)
73 3e5z_A Putative gluconolactona 83.7 20 0.00069 30.7 22.2 197 111-347 42-256 (296)
74 1ri6_A Putative isomerase YBHE 83.7 21 0.00072 30.9 17.8 148 175-344 151-317 (343)
75 2ojh_A Uncharacterized protein 83.2 19 0.00066 30.1 20.0 208 108-344 51-265 (297)
76 1ijq_A LDL receptor, low-densi 82.5 25 0.00085 30.9 27.2 214 105-363 37-263 (316)
77 3fvz_A Peptidyl-glycine alpha- 81.9 26 0.00089 30.7 17.4 200 108-336 100-323 (329)
78 2hqs_A Protein TOLB; TOLB, PAL 81.6 32 0.0011 31.5 20.4 187 119-343 159-350 (415)
79 1k8k_C P40, ARP2/3 complex 41 81.3 28 0.00094 30.6 17.1 136 175-334 30-172 (372)
80 3c75_H MADH, methylamine dehyd 81.1 19 0.00065 33.5 12.4 69 260-338 330-405 (426)
81 1jmx_B Amine dehydrogenase; ox 80.9 8.4 0.00029 33.7 9.6 119 207-338 9-137 (349)
82 3iz6_a 40S ribosomal protein R 80.7 31 0.0011 30.9 21.5 195 111-337 172-377 (380)
83 4g56_B MGC81050 protein; prote 80.7 31 0.001 30.7 14.9 186 108-336 149-344 (357)
84 1gxr_A ESG1, transducin-like e 80.5 27 0.00092 30.0 21.8 127 175-333 205-335 (337)
85 4g56_B MGC81050 protein; prote 80.4 31 0.0011 30.7 18.7 194 108-338 104-304 (357)
86 1npe_A Nidogen, entactin; glyc 80.2 26 0.00088 29.6 18.3 162 147-343 38-204 (267)
87 1pjx_A Dfpase, DIISOPROPYLFLUO 80.1 28 0.00094 29.9 20.3 193 117-338 44-259 (314)
88 1nir_A Nitrite reductase; hemo 79.6 38 0.0013 32.5 14.4 106 208-338 148-260 (543)
89 3k26_A Polycomb protein EED; W 79.3 31 0.0011 30.0 20.3 64 261-335 299-366 (366)
90 3dwl_C Actin-related protein 2 79.1 5.4 0.00018 35.7 7.8 139 175-337 33-179 (377)
91 1n7d_A LDL receptor, low-densi 79.0 5.1 0.00018 40.1 8.1 114 203-338 499-617 (699)
92 1r5m_A SIR4-interacting protei 78.7 36 0.0012 30.3 17.8 186 108-335 216-425 (425)
93 3e5z_A Putative gluconolactona 78.4 18 0.00063 31.0 10.9 117 208-343 38-167 (296)
94 2vdu_B TRNA (guanine-N(7)-)-me 78.4 41 0.0014 30.9 19.7 64 261-338 210-274 (450)
95 3fm0_A Protein CIAO1; WDR39,SG 78.0 25 0.00085 31.1 11.9 71 260-343 27-98 (345)
96 3jrp_A Fusion protein of prote 77.8 35 0.0012 29.8 17.6 97 226-338 34-137 (379)
97 1qks_A Cytochrome CD1 nitrite 77.0 48 0.0016 32.1 14.2 106 208-338 166-278 (567)
98 3hrp_A Uncharacterized protein 76.8 25 0.00087 32.3 11.8 114 203-343 134-255 (409)
99 3i2n_A WD repeat-containing pr 76.7 37 0.0013 29.4 19.3 191 111-337 131-355 (357)
100 1nir_A Nitrite reductase; hemo 76.2 56 0.0019 31.3 19.1 193 108-338 147-358 (543)
101 3nol_A Glutamine cyclotransfer 76.2 37 0.0013 29.2 14.5 139 175-345 65-210 (262)
102 3tc9_A Hypothetical hydrolase; 75.8 41 0.0014 31.1 13.0 112 203-338 140-260 (430)
103 3iuj_A Prolyl endopeptidase; h 75.6 66 0.0022 31.8 18.1 120 207-344 290-412 (693)
104 3v64_C Agrin; beta propeller, 75.5 44 0.0015 29.8 26.6 213 106-362 81-299 (349)
105 2ghs_A AGR_C_1268P; regucalcin 75.4 42 0.0014 29.4 14.3 111 209-343 61-174 (326)
106 3nok_A Glutaminyl cyclase; bet 75.4 40 0.0014 29.1 14.4 112 205-345 102-219 (268)
107 3mbr_X Glutamine cyclotransfer 75.4 37 0.0013 28.8 16.5 140 175-346 43-189 (243)
108 2ojh_A Uncharacterized protein 75.2 35 0.0012 28.4 17.5 186 118-343 21-212 (297)
109 3k26_A Polycomb protein EED; W 74.9 42 0.0014 29.2 13.1 94 226-338 96-195 (366)
110 4a2l_A BT_4663, two-component 74.9 73 0.0025 32.0 22.4 196 108-343 415-620 (795)
111 2fp8_A Strictosidine synthase; 74.8 42 0.0014 29.2 16.3 205 112-346 33-278 (322)
112 4gqb_B Methylosome protein 50; 74.5 46 0.0016 29.5 21.5 197 108-343 92-295 (344)
113 1rwi_B Serine/threonine-protei 73.8 38 0.0013 28.2 18.5 192 104-338 29-225 (270)
114 3dr2_A Exported gluconolactona 73.6 22 0.00077 30.7 10.2 118 208-343 55-184 (305)
115 3vgz_A Uncharacterized protein 73.5 45 0.0015 28.9 21.5 186 118-338 68-265 (353)
116 2pm9_A Protein WEB1, protein t 73.2 51 0.0017 29.4 16.6 66 261-336 178-250 (416)
117 3jro_A Fusion protein of prote 73.1 79 0.0027 31.5 17.5 97 226-338 32-135 (753)
118 1q7f_A NHL, brain tumor CG1071 73.1 42 0.0014 28.3 23.2 191 107-336 86-281 (286)
119 2qc5_A Streptogramin B lactona 73.0 41 0.0014 28.3 18.9 198 104-346 67-268 (300)
120 3scy_A Hypothetical bacterial 72.2 51 0.0017 29.0 17.3 74 260-344 221-300 (361)
121 2qe8_A Uncharacterized protein 71.8 52 0.0018 29.0 13.2 78 203-281 70-153 (343)
122 2z2n_A Virginiamycin B lyase; 71.6 45 0.0015 28.1 19.1 193 104-343 20-218 (299)
123 3u4y_A Uncharacterized protein 71.5 49 0.0017 28.5 14.1 103 209-338 10-120 (331)
124 2ovr_B FBW7, F-BOX/WD repeat p 71.4 61 0.0021 29.5 26.8 188 102-338 162-351 (445)
125 2qc5_A Streptogramin B lactona 71.3 45 0.0016 28.0 19.4 193 104-343 25-223 (300)
126 2iwa_A Glutamine cyclotransfer 71.3 50 0.0017 28.5 21.3 192 109-337 31-239 (266)
127 3o4h_A Acylamino-acid-releasin 70.8 74 0.0025 30.3 15.3 191 109-335 122-315 (582)
128 4aez_A CDC20, WD repeat-contai 70.7 60 0.002 29.1 21.9 95 226-338 285-383 (401)
129 2oiz_A Aromatic amine dehydrog 70.0 60 0.0021 28.9 13.2 70 260-344 265-341 (361)
130 1sq9_A Antiviral protein SKI8; 68.7 62 0.0021 28.6 19.0 101 226-337 259-397 (397)
131 4a11_B DNA excision repair pro 68.5 62 0.0021 28.5 18.6 100 226-338 268-368 (408)
132 2pm9_A Protein WEB1, protein t 68.4 65 0.0022 28.7 15.2 199 110-338 127-340 (416)
133 3v65_B Low-density lipoprotein 68.3 69 0.0024 29.0 23.1 192 109-343 87-283 (386)
134 3hrp_A Uncharacterized protein 68.3 72 0.0025 29.1 19.8 200 104-343 136-360 (409)
135 3g4e_A Regucalcin; six bladed 68.1 57 0.002 27.9 19.5 136 175-338 35-185 (297)
136 2dg1_A DRP35, lactonase; beta 67.9 59 0.002 28.1 19.5 207 108-346 54-272 (333)
137 3v9f_A Two-component system se 67.5 1E+02 0.0036 30.7 23.0 194 108-343 372-574 (781)
138 1ijq_A LDL receptor, low-densi 67.3 64 0.0022 28.2 20.7 187 112-343 4-201 (316)
139 4hw6_A Hypothetical protein, I 66.7 65 0.0022 29.8 12.1 112 203-338 142-262 (433)
140 1pby_B Quinohemoprotein amine 66.4 56 0.0019 27.9 11.2 100 226-346 220-320 (337)
141 4ery_A WD repeat-containing pr 65.7 63 0.0022 27.5 23.5 182 114-338 40-226 (312)
142 4aow_A Guanine nucleotide-bind 65.4 65 0.0022 27.6 20.6 133 175-337 195-339 (340)
143 1yr2_A Prolyl oligopeptidase; 64.1 1.2E+02 0.004 30.1 18.4 117 207-343 326-447 (741)
144 4gqb_B Methylosome protein 50; 63.9 78 0.0027 27.9 17.1 189 108-338 137-334 (344)
145 2z3z_A Dipeptidyl aminopeptida 63.4 1.1E+02 0.0039 29.7 20.1 156 175-343 235-397 (706)
146 1pgu_A Actin interacting prote 62.9 1E+02 0.0035 29.0 19.9 135 175-336 467-615 (615)
147 2xyi_A Probable histone-bindin 61.7 94 0.0032 28.2 16.8 194 111-338 196-413 (430)
148 1jmx_B Amine dehydrogenase; ox 61.5 46 0.0016 28.7 9.7 67 260-338 10-77 (349)
149 3fm0_A Protein CIAO1; WDR39,SG 61.4 83 0.0029 27.5 18.7 141 175-338 38-184 (345)
150 3dr2_A Exported gluconolactona 60.2 82 0.0028 27.0 18.1 199 111-347 59-277 (305)
151 3vl1_A 26S proteasome regulato 59.8 95 0.0033 27.6 20.9 94 226-335 314-419 (420)
152 3mmy_A MRNA export factor; mRN 59.6 86 0.0029 27.0 19.8 190 111-338 100-307 (368)
153 2z3z_A Dipeptidyl aminopeptida 59.5 1.3E+02 0.0046 29.2 25.0 195 119-338 235-438 (706)
154 3m0c_C LDL receptor, low-densi 59.1 1.6E+02 0.0053 29.9 21.2 117 203-343 474-595 (791)
155 2p4o_A Hypothetical protein; p 59.1 87 0.003 26.9 13.7 105 208-338 42-150 (306)
156 3p5b_L Low density lipoprotein 58.7 1.1E+02 0.0037 27.9 27.7 213 108-363 122-345 (400)
157 4a0p_A LRP6, LRP-6, low-densit 58.5 1.4E+02 0.0048 29.2 29.1 192 106-338 45-240 (628)
158 2fp8_A Strictosidine synthase; 58.4 91 0.0031 26.9 11.4 127 203-343 22-180 (322)
159 3vl1_A 26S proteasome regulato 58.3 1E+02 0.0035 27.4 25.7 187 110-337 110-324 (420)
160 1sq9_A Antiviral protein SKI8; 58.2 98 0.0033 27.2 19.3 67 260-338 197-270 (397)
161 4e54_B DNA damage-binding prot 58.1 58 0.002 29.7 10.1 100 226-343 143-246 (435)
162 3v7d_B Cell division control p 57.8 1.1E+02 0.0038 27.7 24.5 194 105-338 128-344 (464)
163 1qks_A Cytochrome CD1 nitrite 57.2 1.4E+02 0.0048 28.7 21.6 198 109-345 166-382 (567)
164 1pby_B Quinohemoprotein amine 56.9 91 0.0031 26.5 12.3 107 226-338 12-127 (337)
165 1r5m_A SIR4-interacting protei 56.9 1E+02 0.0035 27.1 22.2 92 226-338 228-322 (425)
166 3sfz_A APAF-1, apoptotic pepti 56.8 2E+02 0.0067 30.3 23.4 190 109-338 626-831 (1249)
167 3odt_A Protein DOA1; ubiquitin 55.3 93 0.0032 26.1 20.5 91 226-338 206-299 (313)
168 3p5b_L Low density lipoprotein 55.2 1.2E+02 0.0042 27.5 20.9 191 110-343 84-283 (400)
169 4a0p_A LRP6, LRP-6, low-densit 55.1 1.6E+02 0.0055 28.8 21.2 185 112-338 9-200 (628)
170 1erj_A Transcriptional repress 53.9 1.2E+02 0.0041 27.0 23.4 194 108-338 133-344 (393)
171 2bkl_A Prolyl endopeptidase; m 53.3 1.7E+02 0.0059 28.6 23.9 196 120-344 203-404 (695)
172 4gga_A P55CDC, cell division c 52.7 1.3E+02 0.0044 27.0 12.8 86 237-338 94-181 (420)
173 4a2l_A BT_4663, two-component 52.6 1.9E+02 0.0065 28.9 24.9 198 108-343 366-577 (795)
174 3odt_A Protein DOA1; ubiquitin 52.6 1E+02 0.0035 25.8 24.3 188 108-338 28-217 (313)
175 3no2_A Uncharacterized protein 52.4 1.1E+02 0.0037 26.0 15.2 141 175-345 15-163 (276)
176 1erj_A Transcriptional repress 52.2 1.3E+02 0.0044 26.8 15.6 92 226-338 146-241 (393)
177 3lrv_A PRE-mRNA-splicing facto 51.9 1.2E+02 0.0041 26.3 14.8 66 260-338 138-204 (343)
178 3sov_A LRP-6, low-density lipo 51.5 1.2E+02 0.0042 26.4 14.7 112 208-343 90-203 (318)
179 3iz6_a 40S ribosomal protein R 51.2 1.3E+02 0.0045 26.6 16.4 141 175-338 180-332 (380)
180 3mkq_A Coatomer beta'-subunit; 50.8 1.9E+02 0.0066 28.5 23.4 187 109-338 67-262 (814)
181 3f3f_A Nucleoporin SEH1; struc 50.2 1.2E+02 0.004 25.7 16.5 97 226-338 34-146 (351)
182 3azo_A Aminopeptidase; POP fam 48.8 1.9E+02 0.0065 27.8 19.8 194 119-343 161-375 (662)
183 3v64_C Agrin; beta propeller, 48.3 1.5E+02 0.005 26.3 23.5 192 109-343 44-240 (349)
184 3lrv_A PRE-mRNA-splicing facto 48.1 1.4E+02 0.0047 25.9 17.6 199 103-338 88-297 (343)
185 1mda_H Methylamine dehydrogena 47.9 67 0.0023 29.1 8.4 50 279-338 298-349 (368)
186 3mkq_A Coatomer beta'-subunit; 47.2 2.2E+02 0.0075 28.0 24.1 184 112-338 28-220 (814)
187 1flg_A Protein (quinoprotein e 45.0 1.5E+02 0.0051 28.6 10.9 31 203-240 63-95 (582)
188 3amr_A 3-phytase; beta-propell 44.8 1.8E+02 0.006 26.2 20.7 198 108-338 39-267 (355)
189 2ghs_A AGR_C_1268P; regucalcin 44.5 1.6E+02 0.0053 25.6 23.0 200 106-346 57-269 (326)
190 4aow_A Guanine nucleotide-bind 44.5 1.5E+02 0.005 25.2 17.1 95 226-338 151-249 (340)
191 4gq1_A NUP37; propeller, trans 43.5 1.8E+02 0.0061 25.9 13.3 67 260-338 155-221 (393)
192 2ynn_A Coatomer subunit beta'; 42.9 1.5E+02 0.0053 25.1 12.6 84 260-361 24-108 (304)
193 2ecf_A Dipeptidyl peptidase IV 40.9 2.6E+02 0.009 27.2 21.0 192 120-338 264-462 (741)
194 1ddw_A GLGF-domain protein hom 40.0 74 0.0025 23.7 6.1 40 119-165 11-51 (120)
195 4ggc_A P55CDC, cell division c 39.1 1.7E+02 0.0058 24.4 22.0 196 107-338 34-233 (318)
196 2pm7_B Protein transport prote 38.6 1.8E+02 0.0061 24.5 16.1 96 226-337 32-134 (297)
197 1evh_A WH1 domain, protein (ME 38.6 58 0.002 23.9 5.2 41 120-165 12-52 (112)
198 4ggc_A P55CDC, cell division c 38.3 1.7E+02 0.006 24.4 12.7 55 274-338 46-101 (318)
199 3fvz_A Peptidyl-glycine alpha- 38.0 2E+02 0.0067 24.8 17.3 120 203-338 94-230 (329)
200 1got_B GT-beta; complex (GTP-b 37.9 2E+02 0.0067 24.8 23.0 93 226-338 165-260 (340)
201 4hvt_A Ritya.17583.B, post-pro 35.6 3.4E+02 0.012 26.9 13.2 125 206-343 297-435 (711)
202 3i2n_A WD repeat-containing pr 35.2 2.1E+02 0.0071 24.3 20.9 107 207-337 178-293 (357)
203 3vu4_A KMHSV2; beta-propeller 34.3 2.3E+02 0.008 24.6 18.1 66 260-338 206-274 (355)
204 2pbi_B Guanine nucleotide-bind 33.8 2.4E+02 0.0081 24.6 20.6 182 111-332 168-354 (354)
205 1kv9_A Type II quinohemoprotei 33.7 2.7E+02 0.0094 27.2 11.0 30 203-239 61-92 (668)
206 2ad6_A Methanol dehydrogenase 33.4 1.6E+02 0.0055 28.3 9.0 30 203-239 57-90 (571)
207 4ery_A WD repeat-containing pr 32.1 2.3E+02 0.0077 23.8 24.7 185 111-338 79-271 (312)
208 3ow8_A WD repeat-containing pr 31.8 2.4E+02 0.0083 24.1 21.9 178 116-338 99-282 (321)
209 3dw8_B Serine/threonine-protei 31.7 2.7E+02 0.0094 24.7 18.0 104 226-343 250-379 (447)
210 1pjx_A Dfpase, DIISOPROPYLFLUO 31.7 2.3E+02 0.0078 23.7 17.4 141 175-338 46-211 (314)
211 4h5i_A Guanine nucleotide-exch 31.2 2.7E+02 0.0092 24.4 17.4 139 175-338 157-303 (365)
212 3bg1_A Protein SEC13 homolog; 30.9 2.5E+02 0.0085 23.9 11.1 95 226-336 36-137 (316)
213 1kb0_A Quinohemoprotein alcoho 30.8 3.9E+02 0.013 26.1 13.3 31 203-240 123-155 (677)
214 3sov_A LRP-6, low-density lipo 30.3 2.7E+02 0.0092 24.2 24.1 157 175-363 101-263 (318)
215 3gre_A Serine/threonine-protei 29.8 3E+02 0.01 24.5 14.2 96 226-338 193-295 (437)
216 3mmy_A MRNA export factor; mRN 29.8 2.6E+02 0.0088 23.7 20.3 181 111-336 56-248 (368)
217 2ymu_A WD-40 repeat protein; u 28.9 3.5E+02 0.012 25.0 25.7 96 226-343 408-504 (577)
218 1egx_A VAsp, vasodilator-stimu 28.4 98 0.0034 22.7 5.0 42 120-165 12-53 (115)
219 1i2h_A PSD-ZIP45(homer-1C/VESL 28.1 1.2E+02 0.0042 23.9 5.8 40 119-165 16-56 (168)
220 1kb0_A Quinohemoprotein alcoho 28.0 4.3E+02 0.015 25.8 17.1 122 108-241 76-208 (677)
221 3ei3_B DNA damage-binding prot 27.7 3E+02 0.01 23.9 21.7 135 175-335 96-236 (383)
222 1pgu_A Actin interacting prote 27.2 3.8E+02 0.013 24.9 21.6 99 226-338 230-331 (615)
223 2vdu_B TRNA (guanine-N(7)-)-me 26.8 3.5E+02 0.012 24.3 23.0 202 111-338 163-396 (450)
224 2hes_X YDR267CP; beta-propelle 26.7 3E+02 0.01 23.5 12.9 100 226-343 176-286 (330)
225 3dm0_A Maltose-binding peripla 24.6 4.8E+02 0.016 25.2 20.2 195 104-342 437-637 (694)
226 3gre_A Serine/threonine-protei 24.4 3.7E+02 0.013 23.8 9.6 67 260-338 181-248 (437)
227 3iuj_A Prolyl endopeptidase; h 24.1 5E+02 0.017 25.2 12.5 100 226-345 260-367 (693)
228 2hes_X YDR267CP; beta-propelle 23.9 3.4E+02 0.012 23.2 12.0 67 260-338 118-187 (330)
229 2pm7_B Protein transport prote 23.6 3.2E+02 0.011 22.8 20.5 66 261-337 170-240 (297)
230 3s94_A LRP-6, low-density lipo 22.3 5.4E+02 0.018 24.9 24.1 161 147-343 351-516 (619)
231 2oaj_A Protein SNI1; WD40 repe 22.1 6.3E+02 0.022 25.6 15.9 96 226-344 40-136 (902)
232 3kvp_A Uncharacterized protein 21.5 85 0.0029 20.6 3.0 17 326-344 40-56 (72)
233 1kv9_A Type II quinohemoprotei 21.5 5.7E+02 0.019 24.9 15.4 121 108-240 65-195 (668)
234 2oaj_A Protein SNI1; WD40 repe 21.4 6.5E+02 0.022 25.5 21.6 188 112-338 32-245 (902)
235 2kwv_A RAD30 homolog B, DNA po 20.8 48 0.0016 19.9 1.6 16 2-17 22-37 (48)
236 3s94_A LRP-6, low-density lipo 20.8 5.7E+02 0.02 24.6 27.5 192 106-338 357-554 (619)
237 1n7d_A LDL receptor, low-densi 20.6 2.5E+02 0.0086 27.7 7.9 56 175-237 562-617 (699)
238 3frx_A Guanine nucleotide-bind 20.3 3.9E+02 0.013 22.6 12.5 87 260-361 29-118 (319)
239 2qe8_A Uncharacterized protein 20.2 4.2E+02 0.014 22.8 10.0 125 203-343 20-160 (343)
240 2bkl_A Prolyl endopeptidase; m 20.0 4.4E+02 0.015 25.6 9.6 76 259-338 78-159 (695)
No 1
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.42 E-value=9.1e-11 Score=107.43 Aligned_cols=220 Identities=13% Similarity=0.110 Sum_probs=136.6
Q ss_pred cEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEee-cCcc-ceEEEEEEcCCCcEEEcccCCCcc
Q 016891 120 GIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVI-GNVG-YTEIAVYSLRTNSWRRIRVDFPYY 197 (381)
Q Consensus 120 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~-~~~~-~~~~~vyss~t~~W~~~~~~~p~~ 197 (381)
.++++||.|++|..+|+.+...... ..+.+ ++ +++.+..... .... ...+++|+..+++|+.++ .+|..
T Consensus 68 ~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~------~~-~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~-~~p~~ 138 (315)
T 4asc_A 68 YFLQFDHLDSEWLGMPPLPSPRCLF-GLGEA------LN-SIYVVGGREIKDGERCLDSVMCYDRLSFKWGESD-PLPYV 138 (315)
T ss_dssp EEEEEETTTTEEEECCCBSSCEESC-EEEEE------TT-EEEEECCEESSTTCCBCCCEEEEETTTTEEEECC-CCSSC
T ss_pred ceEEecCCCCeEEECCCCCcchhce-eEEEE------CC-EEEEEeCCcCCCCCcccceEEEECCCCCcEeECC-CCCCc
Confidence 3889999999999999876433221 12212 12 5555543211 1122 278999999999999998 66543
Q ss_pred eecCCCcEEECCeeEEEEeeCCCCCCcCEEEEEECCCCeeeee-cCCCCCCCCCceeEEEEEECCeEEEEEecCCCc-eE
Q 016891 198 ILHGWDGTFADGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEV-PLPHLENRNDVLVMFVGNFSGCLYFSCLCNYPQ-PV 275 (381)
Q Consensus 198 ~~~~~~~v~~nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~~~L~~~~G~L~~~~~~~~~~-~~ 275 (381)
.. ....+.++|.||.+++..........+..||+.+++|+.+ ++|... .....+..+|+|+++....... .-
T Consensus 139 r~-~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r-----~~~~~~~~~~~iyv~GG~~~~~~~~ 212 (315)
T 4asc_A 139 VY-GHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTAR-----SLFGATVHDGRIIVAAGVTDTGLTS 212 (315)
T ss_dssp CB-SCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCC-----BSCEEEEETTEEEEEEEECSSSEEE
T ss_pred cc-ceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCch-----hceEEEEECCEEEEEeccCCCCccc
Confidence 21 1266789999999998743333334799999999999988 455432 3346777899999999876432 33
Q ss_pred EEEEEC---CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccc---------cCCcEEEEEeCCCCceeeeeE
Q 016891 276 DIWVLM---GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDED---------INRWELFWYDLQNQGAAADQV 343 (381)
Q Consensus 276 ~iW~l~---~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~---------~~~~~l~~yd~~t~~~~~~~v 343 (381)
++|.++ .+|..+..++.. .......+. ++. |++.+ |.+.. .....+..||+++++| +.+
T Consensus 213 ~~~~yd~~~~~W~~~~~~p~~--r~~~~~~~~-~~~-l~v~G---G~~~~~~~~~~~~~~~~~~v~~yd~~~~~W--~~~ 283 (315)
T 4asc_A 213 SAEVYSITDNKWAPFEAFPQE--RSSLSLVSL-VGT-LYAIG---GFATLETESGELVPTELNDIWRYNEEEKKW--EGV 283 (315)
T ss_dssp EEEEEETTTTEEEEECCCSSC--CBSCEEEEE-TTE-EEEEE---EEEEEECTTSCEEEEEEEEEEEEETTTTEE--EEE
T ss_pred eEEEEECCCCeEEECCCCCCc--ccceeEEEE-CCE-EEEEC---CccccCcCCccccccccCcEEEecCCCChh--hhh
Confidence 677776 899987655521 112222223 454 77663 11000 0123589999999999 888
Q ss_pred EEecCCCCceeEEEEeeceecC
Q 016891 344 TIHGVPQGCRDTIVCVDSLVSL 365 (381)
Q Consensus 344 ~~~~~~~~~~~~~~y~~sl~~~ 365 (381)
....... +.+..+...|..+
T Consensus 284 -~~~~r~~-~~~~~~~~~l~v~ 303 (315)
T 4asc_A 284 -LREIAYA-AGATFLPVRLNVL 303 (315)
T ss_dssp -ESCSSCC-SSCEEEEEEECGG
T ss_pred -ccCCcCc-cceEEeCCEEEEE
Confidence 2221222 3455555555444
No 2
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.41 E-value=1.4e-10 Score=105.35 Aligned_cols=202 Identities=11% Similarity=0.149 Sum_probs=128.8
Q ss_pred CCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCCcEEEcccCCCcc
Q 016891 118 ENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTNSWRRIRVDFPYY 197 (381)
Q Consensus 118 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W~~~~~~~p~~ 197 (381)
.+.+.++||.|++|..+|+.+....... .+.+ ++ +++.+.... .......+++|++.+++|+.++ .+|..
T Consensus 76 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~-~~~~------~~-~iyv~GG~~-~~~~~~~~~~~d~~~~~W~~~~-~~p~~ 145 (302)
T 2xn4_A 76 VRTVDSYDPVKDQWTSVANMRDRRSTLG-AAVL------NG-LLYAVGGFD-GSTGLSSVEAYNIKSNEWFHVA-PMNTR 145 (302)
T ss_dssp CCCEEEEETTTTEEEEECCCSSCCBSCE-EEEE------TT-EEEEEEEEC-SSCEEEEEEEEETTTTEEEEEC-CCSSC
T ss_pred ccceEEECCCCCceeeCCCCCccccceE-EEEE------CC-EEEEEcCCC-CCccCceEEEEeCCCCeEeecC-CCCCc
Confidence 3578999999999999998765443222 2222 12 455554321 1112268999999999999998 66543
Q ss_pred eecCCCcEEECCeeEEEEeeCCCC-CCcCEEEEEECCCCeeeee-cCCCCCCCCCceeEEEEEECCeEEEEEecCCCc-e
Q 016891 198 ILHGWDGTFADGHVHWLVTNNPED-YIENLIIAFNLKSEEFHEV-PLPHLENRNDVLVMFVGNFSGCLYFSCLCNYPQ-P 274 (381)
Q Consensus 198 ~~~~~~~v~~nG~lYwl~~~~~~~-~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~~~L~~~~G~L~~~~~~~~~~-~ 274 (381)
.. ....+.++|.||.+++..... .....+..||+.+++|+.+ ++|... ....++..+|+|+++....... .
T Consensus 146 r~-~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r-----~~~~~~~~~~~iyv~GG~~~~~~~ 219 (302)
T 2xn4_A 146 RS-SVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRR-----SGAGVGVLNNLLYAVGGHDGPLVR 219 (302)
T ss_dssp CB-SCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCC-----BSCEEEEETTEEEEECCBSSSSBC
T ss_pred cc-CceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCcccc-----ccccEEEECCEEEEECCCCCCccc
Confidence 21 116677899999998754321 1123699999999999998 455432 2346777899999998765321 2
Q ss_pred EEEEEEC---CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCceeeeeEE
Q 016891 275 VDIWVLM---GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGAAADQVT 344 (381)
Q Consensus 275 ~~iW~l~---~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~~~~~v~ 344 (381)
-++|.++ .+|.++..++.. .......+. ++. |++.+ |.+.......+..||+++++| +.+.
T Consensus 220 ~~~~~yd~~~~~W~~~~~~~~~--r~~~~~~~~-~~~-i~v~G---G~~~~~~~~~v~~yd~~~~~W--~~~~ 283 (302)
T 2xn4_A 220 KSVEVYDPTTNAWRQVADMNMC--RRNAGVCAV-NGL-LYVVG---GDDGSCNLASVEYYNPTTDKW--TVVS 283 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSC--CBSCEEEEE-TTE-EEEEC---CBCSSSBCCCEEEEETTTTEE--EECS
T ss_pred ceEEEEeCCCCCEeeCCCCCCc--cccCeEEEE-CCE-EEEEC---CcCCCcccccEEEEcCCCCeE--EECC
Confidence 2455555 899987655521 112222222 555 77773 111111234599999999999 8873
No 3
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.40 E-value=1.1e-10 Score=106.26 Aligned_cols=213 Identities=11% Similarity=-0.007 Sum_probs=133.3
Q ss_pred cCcEEEEee-----CCCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEc
Q 016891 108 CNGLIAFKN-----DENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSL 182 (381)
Q Consensus 108 ~~GLl~~~~-----~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss 182 (381)
.+|.|.+.. ..+.+.++||.|++|..+|+.+...... ..+.+ ++ +++.+............+++|++
T Consensus 54 ~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~------~~-~iyv~GG~~~~~~~~~~~~~~d~ 125 (306)
T 3ii7_A 54 WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSL-AACAA------EG-KIYTSGGSEVGNSALYLFECYDT 125 (306)
T ss_dssp ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSC-EEEEE------TT-EEEEECCBBTTBSCCCCEEEEET
T ss_pred ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccce-eEEEE------CC-EEEEECCCCCCCcEeeeEEEEeC
Confidence 455554433 2467899999999999998776543322 22222 12 45555432111112278999999
Q ss_pred CCCcEEEcccCCCcceecCCCcEEECCeeEEEEeeCCCCCC---cCEEEEEECCCCeeeee-cCCCCCCCCCceeEEEEE
Q 016891 183 RTNSWRRIRVDFPYYILHGWDGTFADGHVHWLVTNNPEDYI---ENLIIAFNLKSEEFHEV-PLPHLENRNDVLVMFVGN 258 (381)
Q Consensus 183 ~t~~W~~~~~~~p~~~~~~~~~v~~nG~lYwl~~~~~~~~~---~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~~~L~~ 258 (381)
.+++|+.++ .+|.... ....+.++|.||.+++....... ...+..||+.+++|+.+ ++|... ....++.
T Consensus 126 ~~~~W~~~~-~~p~~r~-~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r-----~~~~~~~ 198 (306)
T 3ii7_A 126 RTESWHTKP-SMLTQRC-SHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEAR-----KNHGLVF 198 (306)
T ss_dssp TTTEEEEEC-CCSSCCB-SCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCC-----BSCEEEE
T ss_pred CCCceEeCC-CCcCCcc-eeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchh-----hcceEEE
Confidence 999999998 6664322 12667899999999875432211 34699999999999998 445432 3446777
Q ss_pred ECCeEEEEEecCCCc-eEEEEEEC---CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCC
Q 016891 259 FSGCLYFSCLCNYPQ-PVDIWVLM---GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQ 334 (381)
Q Consensus 259 ~~G~L~~~~~~~~~~-~~~iW~l~---~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~ 334 (381)
.+|+|+++....... .-++|.++ .+|..+..++.. .......+. ++. |++.+ |.+.......+..||++
T Consensus 199 ~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~--r~~~~~~~~-~~~-i~v~G---G~~~~~~~~~~~~yd~~ 271 (306)
T 3ii7_A 199 VKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWK--GVTVKCAAV-GSI-VYVLA---GFQGVGRLGHILEYNTE 271 (306)
T ss_dssp ETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCC--BSCCEEEEE-TTE-EEEEE---CBCSSSBCCEEEEEETT
T ss_pred ECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCC--ccceeEEEE-CCE-EEEEe---CcCCCeeeeeEEEEcCC
Confidence 899999998764321 12455555 889987655521 112222223 454 77773 11111123579999999
Q ss_pred CCceeeeeEE
Q 016891 335 NQGAAADQVT 344 (381)
Q Consensus 335 t~~~~~~~v~ 344 (381)
+++| +.+.
T Consensus 272 ~~~W--~~~~ 279 (306)
T 3ii7_A 272 TDKW--VANS 279 (306)
T ss_dssp TTEE--EEEE
T ss_pred CCeE--EeCC
Confidence 9999 8884
No 4
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.39 E-value=2.3e-10 Score=104.36 Aligned_cols=200 Identities=13% Similarity=0.096 Sum_probs=127.2
Q ss_pred CcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCCcEEEcccCCCcce
Q 016891 119 NGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTNSWRRIRVDFPYYI 198 (381)
Q Consensus 119 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W~~~~~~~p~~~ 198 (381)
+.++++||.|++|..+|+.+...... ..+.+ ++ +++.+.... .......+++|++.+++|+.++ .+|...
T Consensus 90 ~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~------~~-~iyv~GG~~-~~~~~~~~~~yd~~~~~W~~~~-~~p~~r 159 (308)
T 1zgk_A 90 SALDCYNPMTNQWSPCAPMSVPRNRI-GVGVI------DG-HIYAVGGSH-GCIHHNSVERYEPERDEWHLVA-PMLTRR 159 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBTC-EEEEE------TT-EEEEECCEE-TTEECCCEEEEETTTTEEEECC-CCSSCC
T ss_pred ceEEEECCCCCeEeECCCCCcCcccc-EEEEE------CC-EEEEEcCCC-CCcccccEEEECCCCCeEeECC-CCCccc
Confidence 57899999999999999876543322 22222 12 455553311 1111267999999999999998 655432
Q ss_pred ecCCCcEEECCeeEEEEeeCCCCCCcCEEEEEECCCCeeeee-cCCCCCCCCCceeEEEEEECCeEEEEEecCCC-ceEE
Q 016891 199 LHGWDGTFADGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEV-PLPHLENRNDVLVMFVGNFSGCLYFSCLCNYP-QPVD 276 (381)
Q Consensus 199 ~~~~~~v~~nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~~~L~~~~G~L~~~~~~~~~-~~~~ 276 (381)
. ....+.++|.||.+++..... ....+..||+.+++|+.+ ++|... ....++..+|+|+++...... ..-+
T Consensus 160 ~-~~~~~~~~~~iyv~GG~~~~~-~~~~~~~yd~~~~~W~~~~~~p~~r-----~~~~~~~~~~~iyv~GG~~~~~~~~~ 232 (308)
T 1zgk_A 160 I-GVGVAVLNRLLYAVGGFDGTN-RLNSAECYYPERNEWRMITAMNTIR-----SGAGVCVLHNCIYAAGGYDGQDQLNS 232 (308)
T ss_dssp B-SCEEEEETTEEEEECCBCSSC-BCCCEEEEETTTTEEEECCCCSSCC-----BSCEEEEETTEEEEECCBCSSSBCCC
T ss_pred c-ceEEEEECCEEEEEeCCCCCC-cCceEEEEeCCCCeEeeCCCCCCcc-----ccceEEEECCEEEEEeCCCCCCccce
Confidence 2 126677899999998764321 134699999999999988 444332 234566779999999876532 1234
Q ss_pred EEEEC---CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCceeeeeEE
Q 016891 277 IWVLM---GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGAAADQVT 344 (381)
Q Consensus 277 iW~l~---~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~~~~~v~ 344 (381)
+|.++ .+|.++..++.. .......+. ++. |++.+ |.+.......+..||+++++| +++.
T Consensus 233 v~~yd~~~~~W~~~~~~p~~--r~~~~~~~~-~~~-i~v~G---G~~~~~~~~~v~~yd~~~~~W--~~~~ 294 (308)
T 1zgk_A 233 VERYDVETETWTFVAPMKHR--RSALGITVH-QGR-IYVLG---GYDGHTFLDSVECYDPDTDTW--SEVT 294 (308)
T ss_dssp EEEEETTTTEEEECCCCSSC--CBSCEEEEE-TTE-EEEEC---CBCSSCBCCEEEEEETTTTEE--EEEE
T ss_pred EEEEeCCCCcEEECCCCCCC--ccceEEEEE-CCE-EEEEc---CcCCCcccceEEEEcCCCCEE--eecC
Confidence 55555 899987655521 112222222 454 77773 111111235699999999999 8883
No 5
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.38 E-value=1.2e-10 Score=106.83 Aligned_cols=199 Identities=13% Similarity=0.182 Sum_probs=128.1
Q ss_pred EEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCcc-ceEEEEEEcCCCcEEEcccCCCccee
Q 016891 121 IALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVG-YTEIAVYSLRTNSWRRIRVDFPYYIL 199 (381)
Q Consensus 121 ~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~-~~~~~vyss~t~~W~~~~~~~p~~~~ 199 (381)
++++||.|++|..+|+.+...... ..+.+ ++ +++.+......... ...+++|++.+++|+.++ .+|....
T Consensus 80 ~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~------~~-~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~-~~p~~r~ 150 (318)
T 2woz_A 80 FFQLDNVSSEWVGLPPLPSARCLF-GLGEV------DD-KIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVK-NLPIKVY 150 (318)
T ss_dssp EEEEETTTTEEEECSCBSSCBCSC-EEEEE------TT-EEEEEEEEBTTTCCEEEEEEEEETTTTEEEEEC-CCSSCEE
T ss_pred EEEEeCCCCcEEECCCCCcccccc-ceEEE------CC-EEEEEcCccCCCCcccceEEEEeCCCCCEeECC-CCCCccc
Confidence 889999999999999876543222 22222 12 45555543211222 278999999999999998 6664432
Q ss_pred cCCCcEEECCeeEEEEeeCCCCCCcCEEEEEECCCCeeeee-cCCCCCCCCCceeEEEEEECCeEEEEEecCCCc-eEEE
Q 016891 200 HGWDGTFADGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEV-PLPHLENRNDVLVMFVGNFSGCLYFSCLCNYPQ-PVDI 277 (381)
Q Consensus 200 ~~~~~v~~nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~~~L~~~~G~L~~~~~~~~~~-~~~i 277 (381)
. ...+.++|.||.+++..........+..||+.+++|+.+ ++|... ....++..+|+|+++....... .-++
T Consensus 151 ~-~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r-----~~~~~~~~~~~iyv~GG~~~~~~~~~~ 224 (318)
T 2woz_A 151 G-HNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPR-----SMFGVAIHKGKIVIAGGVTEDGLSASV 224 (318)
T ss_dssp S-CEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCC-----BSCEEEEETTEEEEEEEEETTEEEEEE
T ss_pred c-cEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCc-----ccceEEEECCEEEEEcCcCCCCccceE
Confidence 2 266779999999987543222234699999999999998 444332 2345677899999998865431 2356
Q ss_pred EEEC---CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCcc---------ccCCcEEEEEeCCCCceeeeeE
Q 016891 278 WVLM---GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDE---------DINRWELFWYDLQNQGAAADQV 343 (381)
Q Consensus 278 W~l~---~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~---------~~~~~~l~~yd~~t~~~~~~~v 343 (381)
|.++ .+|.++..++.. .....+.+. ++. |++.+ |.+. ......++.||+++++| +++
T Consensus 225 ~~yd~~~~~W~~~~~~p~~--r~~~~~~~~-~~~-i~v~G---G~~~~~~~~~~~~~~~~~~v~~yd~~~~~W--~~~ 293 (318)
T 2woz_A 225 EAFDLKTNKWEVMTEFPQE--RSSISLVSL-AGS-LYAIG---GFAMIQLESKEFAPTEVNDIWKYEDDKKEW--AGM 293 (318)
T ss_dssp EEEETTTCCEEECCCCSSC--CBSCEEEEE-TTE-EEEEC---CBCCBC----CCBCCBCCCEEEEETTTTEE--EEE
T ss_pred EEEECCCCeEEECCCCCCc--ccceEEEEE-CCE-EEEEC---CeeccCCCCceeccceeeeEEEEeCCCCEe--hhh
Confidence 6666 899987665521 112222222 454 77763 1110 01134599999999999 888
No 6
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.37 E-value=7.6e-11 Score=107.38 Aligned_cols=225 Identities=12% Similarity=0.053 Sum_probs=139.0
Q ss_pred CCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCCcEEEcccCCCcc
Q 016891 118 ENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTNSWRRIRVDFPYY 197 (381)
Q Consensus 118 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W~~~~~~~p~~ 197 (381)
.+.+.++||.+++|..+++.+...... ..+.+ ++ +++.+.... ......+++|+..+++|+.++ .+|..
T Consensus 23 ~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~------~~-~lyv~GG~~--~~~~~~~~~~d~~~~~W~~~~-~~p~~ 91 (306)
T 3ii7_A 23 PQSCRYFNPKDYSWTDIRCPFEKRRDA-ACVFW------DN-VVYILGGSQ--LFPIKRMDCYNVVKDSWYSKL-GPPTP 91 (306)
T ss_dssp TTSEEEEETTTTEEEECCCCSCCCBSC-EEEEE------TT-EEEEECCBS--SSBCCEEEEEETTTTEEEEEE-CCSSC
T ss_pred CceEEEecCCCCCEecCCCCCccccee-EEEEE------CC-EEEEEeCCC--CCCcceEEEEeCCCCeEEECC-CCCcc
Confidence 467999999999999999876543322 22222 12 344443311 112378999999999999998 66643
Q ss_pred eecCCCcEEECCeeEEEEeeCCCCCCcCEEEEEECCCCeeeee-cCCCCCCCCCceeEEEEEECCeEEEEEecCCCc---
Q 016891 198 ILHGWDGTFADGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEV-PLPHLENRNDVLVMFVGNFSGCLYFSCLCNYPQ--- 273 (381)
Q Consensus 198 ~~~~~~~v~~nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~~~L~~~~G~L~~~~~~~~~~--- 273 (381)
... ...+.++|.||.+++..........+..||+.+++|+.+ ++|... ....++..+|+|+++.......
T Consensus 92 r~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r-----~~~~~~~~~~~iyv~GG~~~~~~~~ 165 (306)
T 3ii7_A 92 RDS-LAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQR-----CSHGMVEANGLIYVCGGSLGNNVSG 165 (306)
T ss_dssp CBS-CEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCC-----BSCEEEEETTEEEEECCEESCTTTC
T ss_pred ccc-eeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCc-----ceeEEEEECCEEEEECCCCCCCCcc
Confidence 221 166788999999987652222334699999999999998 455433 2345677899999998764211
Q ss_pred --eEEEEEEC---CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCceeeeeEEEec-
Q 016891 274 --PVDIWVLM---GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGAAADQVTIHG- 347 (381)
Q Consensus 274 --~~~iW~l~---~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~~~~~v~~~~- 347 (381)
.-++|.++ .+|.++..++.. .......+. ++. |++.+ |.+.......+..||+++++| +.+.-..
T Consensus 166 ~~~~~~~~yd~~~~~W~~~~~~p~~--r~~~~~~~~-~~~-i~v~G---G~~~~~~~~~~~~yd~~~~~W--~~~~~~p~ 236 (306)
T 3ii7_A 166 RVLNSCEVYDPATETWTELCPMIEA--RKNHGLVFV-KDK-IFAVG---GQNGLGGLDNVEYYDIKLNEW--KMVSPMPW 236 (306)
T ss_dssp EECCCEEEEETTTTEEEEECCCSSC--CBSCEEEEE-TTE-EEEEC---CEETTEEBCCEEEEETTTTEE--EECCCCSC
T ss_pred cccceEEEeCCCCCeEEECCCccch--hhcceEEEE-CCE-EEEEe---CCCCCCCCceEEEeeCCCCcE--EECCCCCC
Confidence 23455555 899987655421 112222222 454 77773 111111124599999999999 8883222
Q ss_pred CCCCceeEEEEeeceecCcCCC
Q 016891 348 VPQGCRDTIVCVDSLVSLAACA 369 (381)
Q Consensus 348 ~~~~~~~~~~y~~sl~~~~~~~ 369 (381)
.... +.+..+.+.|+-+.+..
T Consensus 237 ~r~~-~~~~~~~~~i~v~GG~~ 257 (306)
T 3ii7_A 237 KGVT-VKCAAVGSIVYVLAGFQ 257 (306)
T ss_dssp CBSC-CEEEEETTEEEEEECBC
T ss_pred Cccc-eeEEEECCEEEEEeCcC
Confidence 1122 44555666665555443
No 7
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.34 E-value=3.7e-10 Score=102.50 Aligned_cols=201 Identities=13% Similarity=0.082 Sum_probs=127.6
Q ss_pred CCcEEEEccCCcc---eeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCCcEEEcccCC
Q 016891 118 ENGIALWNPSTEE---HLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTNSWRRIRVDF 194 (381)
Q Consensus 118 ~~~~~V~NP~T~~---~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W~~~~~~~ 194 (381)
.+.++++||.|++ |..+++.+...... ..+.+ ++ +++.+.... .......+++|++.+++|+.++ .+
T Consensus 77 ~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~-~~~~~------~~-~lyv~GG~~-~~~~~~~~~~~d~~~~~W~~~~-~~ 146 (301)
T 2vpj_A 77 LSSVECLDYTADEDGVWYSVAPMNVRRGLA-GATTL------GD-MIYVSGGFD-GSRRHTSMERYDPNIDQWSMLG-DM 146 (301)
T ss_dssp CCCEEEEETTCCTTCCCEEECCCSSCCBSC-EEEEE------TT-EEEEECCBC-SSCBCCEEEEEETTTTEEEEEE-EC
T ss_pred CceEEEEECCCCCCCeeEECCCCCCCccce-eEEEE------CC-EEEEEcccC-CCcccceEEEEcCCCCeEEECC-CC
Confidence 3579999999999 99998876544322 22222 12 455553311 1111368999999999999998 66
Q ss_pred CcceecCCCcEEECCeeEEEEeeCCCCCCcCEEEEEECCCCeeeee-cCCCCCCCCCceeEEEEEECCeEEEEEecCCCc
Q 016891 195 PYYILHGWDGTFADGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEV-PLPHLENRNDVLVMFVGNFSGCLYFSCLCNYPQ 273 (381)
Q Consensus 195 p~~~~~~~~~v~~nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~~~L~~~~G~L~~~~~~~~~~ 273 (381)
|.... ....+.++|.||.+++..... ....+.+||+.+++|+.+ ++|... ....++..+|+|+++.......
T Consensus 147 p~~r~-~~~~~~~~~~iyv~GG~~~~~-~~~~~~~~d~~~~~W~~~~~~p~~r-----~~~~~~~~~~~i~v~GG~~~~~ 219 (301)
T 2vpj_A 147 QTARE-GAGLVVASGVIYCLGGYDGLN-ILNSVEKYDPHTGHWTNVTPMATKR-----SGAGVALLNDHIYVVGGFDGTA 219 (301)
T ss_dssp SSCCB-SCEEEEETTEEEEECCBCSSC-BCCCEEEEETTTTEEEEECCCSSCC-----BSCEEEEETTEEEEECCBCSSS
T ss_pred CCCcc-cceEEEECCEEEEECCCCCCc-ccceEEEEeCCCCcEEeCCCCCccc-----ccceEEEECCEEEEEeCCCCCc
Confidence 53321 126677899999998754321 234699999999999998 444433 2346777899999998875321
Q ss_pred -eEEEEEEC---CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCceeeeeEE
Q 016891 274 -PVDIWVLM---GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGAAADQVT 344 (381)
Q Consensus 274 -~~~iW~l~---~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~~~~~v~ 344 (381)
.-++|.++ .+|.++..++.. .......+. ++. |++.+ |.+.......++.||+++++| +.+.
T Consensus 220 ~~~~v~~yd~~~~~W~~~~~~p~~--r~~~~~~~~-~~~-i~v~G---G~~~~~~~~~v~~yd~~~~~W--~~~~ 285 (301)
T 2vpj_A 220 HLSSVEAYNIRTDSWTTVTSMTTP--RCYVGATVL-RGR-LYAIA---GYDGNSLLSSIECYDPIIDSW--EVVT 285 (301)
T ss_dssp BCCCEEEEETTTTEEEEECCCSSC--CBSCEEEEE-TTE-EEEEC---CBCSSSBEEEEEEEETTTTEE--EEEE
T ss_pred ccceEEEEeCCCCcEEECCCCCCc--ccceeEEEE-CCE-EEEEc---CcCCCcccccEEEEcCCCCeE--EEcC
Confidence 22455555 899987655521 112222323 555 77773 111111125699999999999 8883
No 8
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.30 E-value=4.4e-10 Score=102.10 Aligned_cols=225 Identities=12% Similarity=0.079 Sum_probs=137.4
Q ss_pred CcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCCcEEEcccCCCcce
Q 016891 119 NGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTNSWRRIRVDFPYYI 198 (381)
Q Consensus 119 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W~~~~~~~p~~~ 198 (381)
+.+.++||.+++|..+++.+...... ..+.+ ++ +++.+.... .......+++|+..+++|+.++ .+|...
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~------~~-~lyv~GG~~-~~~~~~~~~~~d~~~~~W~~~~-~~p~~r 99 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPSRRCRA-GMVYM------AG-LVFAVGGFN-GSLRVRTVDSYDPVKDQWTSVA-NMRDRR 99 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSC-EEEEE------TT-EEEEESCBC-SSSBCCCEEEEETTTTEEEEEC-CCSSCC
T ss_pred CcEEEEcCcCCcEeEcccCCcccccc-eEEEE------CC-EEEEEeCcC-CCccccceEEECCCCCceeeCC-CCCccc
Confidence 56899999999999998776543222 22211 12 444443211 1111267999999999999998 665432
Q ss_pred ecCCCcEEECCeeEEEEeeCCCCCCcCEEEEEECCCCeeeee-cCCCCCCCCCceeEEEEEECCeEEEEEecCCCc---e
Q 016891 199 LHGWDGTFADGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEV-PLPHLENRNDVLVMFVGNFSGCLYFSCLCNYPQ---P 274 (381)
Q Consensus 199 ~~~~~~v~~nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~~~L~~~~G~L~~~~~~~~~~---~ 274 (381)
.. ...+.++|.+|.+++.... .....+..||+.+++|+.+ ++|... ....++..+|+|+++....... .
T Consensus 100 ~~-~~~~~~~~~iyv~GG~~~~-~~~~~~~~~d~~~~~W~~~~~~p~~r-----~~~~~~~~~~~iyv~GG~~~~~~~~~ 172 (302)
T 2xn4_A 100 ST-LGAAVLNGLLYAVGGFDGS-TGLSSVEAYNIKSNEWFHVAPMNTRR-----SSVGVGVVGGLLYAVGGYDVASRQCL 172 (302)
T ss_dssp BS-CEEEEETTEEEEEEEECSS-CEEEEEEEEETTTTEEEEECCCSSCC-----BSCEEEEETTEEEEECCEETTTTEEC
T ss_pred cc-eEEEEECCEEEEEcCCCCC-ccCceEEEEeCCCCeEeecCCCCCcc-----cCceEEEECCEEEEEeCCCCCCCccc
Confidence 21 2667789999999986532 1223689999999999998 444332 2345677899999998764321 1
Q ss_pred EEEEEEC---CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCceeeeeEEEecCCCC
Q 016891 275 VDIWVLM---GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGAAADQVTIHGVPQG 351 (381)
Q Consensus 275 ~~iW~l~---~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~~~~~v~~~~~~~~ 351 (381)
-++|.++ .+|.++..++.. .......+. ++. |++.+ |.+.......+..||+++++| +.+.-....-.
T Consensus 173 ~~~~~yd~~~~~W~~~~~~p~~--r~~~~~~~~-~~~-iyv~G---G~~~~~~~~~~~~yd~~~~~W--~~~~~~~~~r~ 243 (302)
T 2xn4_A 173 STVECYNATTNEWTYIAEMSTR--RSGAGVGVL-NNL-LYAVG---GHDGPLVRKSVEVYDPTTNAW--RQVADMNMCRR 243 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSC--CBSCEEEEE-TTE-EEEEC---CBSSSSBCCCEEEEETTTTEE--EEECCCSSCCB
T ss_pred cEEEEEeCCCCcEEECCCCccc--cccccEEEE-CCE-EEEEC---CCCCCcccceEEEEeCCCCCE--eeCCCCCCccc
Confidence 2455555 899988655521 112222233 454 77773 111111234699999999999 88842222111
Q ss_pred ceeEEEEeeceecCcCCC
Q 016891 352 CRDTIVCVDSLVSLAACA 369 (381)
Q Consensus 352 ~~~~~~y~~sl~~~~~~~ 369 (381)
.+.+..+.+.|.-+.+..
T Consensus 244 ~~~~~~~~~~i~v~GG~~ 261 (302)
T 2xn4_A 244 NAGVCAVNGLLYVVGGDD 261 (302)
T ss_dssp SCEEEEETTEEEEECCBC
T ss_pred cCeEEEECCEEEEECCcC
Confidence 144555666666555443
No 9
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.28 E-value=1.1e-09 Score=99.26 Aligned_cols=225 Identities=12% Similarity=0.084 Sum_probs=137.4
Q ss_pred CCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCCc---EEEcccCC
Q 016891 118 ENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTNS---WRRIRVDF 194 (381)
Q Consensus 118 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~---W~~~~~~~ 194 (381)
...++++||.|++|..+|+.+...... ..+.+ ++ +++.+.... .......+++|+..+++ |+.+. .+
T Consensus 30 ~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~------~~-~l~v~GG~~-~~~~~~~~~~~d~~~~~~~~W~~~~-~~ 99 (301)
T 2vpj_A 30 IDVVEKYDPKTQEWSFLPSITRKRRYV-ASVSL------HD-RIYVIGGYD-GRSRLSSVECLDYTADEDGVWYSVA-PM 99 (301)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBSC-EEEEE------TT-EEEEECCBC-SSCBCCCEEEEETTCCTTCCCEEEC-CC
T ss_pred eeEEEEEcCCCCeEEeCCCCChhhccc-cEEEE------CC-EEEEEcCCC-CCccCceEEEEECCCCCCCeeEECC-CC
Confidence 357899999999999999776533221 22221 12 455553311 11112679999999999 99998 66
Q ss_pred CcceecCCCcEEECCeeEEEEeeCCCCCCcCEEEEEECCCCeeeee-cCCCCCCCCCceeEEEEEECCeEEEEEecCCC-
Q 016891 195 PYYILHGWDGTFADGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEV-PLPHLENRNDVLVMFVGNFSGCLYFSCLCNYP- 272 (381)
Q Consensus 195 p~~~~~~~~~v~~nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~~~L~~~~G~L~~~~~~~~~- 272 (381)
|..... ...+.++|.+|.+++..... ....+..||+.+++|+.+ ++|... ....++..+|+|+++......
T Consensus 100 p~~r~~-~~~~~~~~~lyv~GG~~~~~-~~~~~~~~d~~~~~W~~~~~~p~~r-----~~~~~~~~~~~iyv~GG~~~~~ 172 (301)
T 2vpj_A 100 NVRRGL-AGATTLGDMIYVSGGFDGSR-RHTSMERYDPNIDQWSMLGDMQTAR-----EGAGLVVASGVIYCLGGYDGLN 172 (301)
T ss_dssp SSCCBS-CEEEEETTEEEEECCBCSSC-BCCEEEEEETTTTEEEEEEECSSCC-----BSCEEEEETTEEEEECCBCSSC
T ss_pred CCCccc-eeEEEECCEEEEEcccCCCc-ccceEEEEcCCCCeEEECCCCCCCc-----ccceEEEECCEEEEECCCCCCc
Confidence 543221 16677899999998765321 234799999999999988 455433 234566779999999876532
Q ss_pred ceEEEEEEC---CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCceeeeeEEEecCC
Q 016891 273 QPVDIWVLM---GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGAAADQVTIHGVP 349 (381)
Q Consensus 273 ~~~~iW~l~---~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~~~~~v~~~~~~ 349 (381)
..-++|.++ .+|.++..++.. .......+. ++. |++.+ |.+.......+..||+++++| +.+.-....
T Consensus 173 ~~~~~~~~d~~~~~W~~~~~~p~~--r~~~~~~~~-~~~-i~v~G---G~~~~~~~~~v~~yd~~~~~W--~~~~~~p~~ 243 (301)
T 2vpj_A 173 ILNSVEKYDPHTGHWTNVTPMATK--RSGAGVALL-NDH-IYVVG---GFDGTAHLSSVEAYNIRTDSW--TTVTSMTTP 243 (301)
T ss_dssp BCCCEEEEETTTTEEEEECCCSSC--CBSCEEEEE-TTE-EEEEC---CBCSSSBCCCEEEEETTTTEE--EEECCCSSC
T ss_pred ccceEEEEeCCCCcEEeCCCCCcc--cccceEEEE-CCE-EEEEe---CCCCCcccceEEEEeCCCCcE--EECCCCCCc
Confidence 123455555 899987655421 112222222 454 87773 111111135699999999999 888422211
Q ss_pred CCceeEEEEeeceecCcCC
Q 016891 350 QGCRDTIVCVDSLVSLAAC 368 (381)
Q Consensus 350 ~~~~~~~~y~~sl~~~~~~ 368 (381)
-..+.+..+.+.|.-+.+.
T Consensus 244 r~~~~~~~~~~~i~v~GG~ 262 (301)
T 2vpj_A 244 RCYVGATVLRGRLYAIAGY 262 (301)
T ss_dssp CBSCEEEEETTEEEEECCB
T ss_pred ccceeEEEECCEEEEEcCc
Confidence 1114455555665555443
No 10
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.26 E-value=3.6e-10 Score=103.12 Aligned_cols=226 Identities=12% Similarity=0.052 Sum_probs=136.9
Q ss_pred CCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEee--cCcc-ceEEEEEEcCCCcEEEcccCC
Q 016891 118 ENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVI--GNVG-YTEIAVYSLRTNSWRRIRVDF 194 (381)
Q Consensus 118 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~--~~~~-~~~~~vyss~t~~W~~~~~~~ 194 (381)
.+.+.++||.+++|..+++.+...... ..+.+ ++ +++.+..... .... ...+++|+..+++|+.++ .+
T Consensus 38 ~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~------~~-~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~-~~ 108 (308)
T 1zgk_A 38 LSYLEAYNPSNGTWLRLADLQVPRSGL-AGCVV------GG-LLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCA-PM 108 (308)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBSC-EEEEE------TT-EEEEECCEEEETTEEEECCCEEEEETTTTEEEECC-CC
T ss_pred cceEEEEcCCCCeEeECCCCCcccccc-eEEEE------CC-EEEEECCCcCCCCCCeecceEEEECCCCCeEeECC-CC
Confidence 457899999999999998776543322 22211 12 4444432210 1111 257999999999999998 66
Q ss_pred CcceecCCCcEEECCeeEEEEeeCCCCCCcCEEEEEECCCCeeeee-cCCCCCCCCCceeEEEEEECCeEEEEEecCCCc
Q 016891 195 PYYILHGWDGTFADGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEV-PLPHLENRNDVLVMFVGNFSGCLYFSCLCNYPQ 273 (381)
Q Consensus 195 p~~~~~~~~~v~~nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~~~L~~~~G~L~~~~~~~~~~ 273 (381)
|..... ...+.++|.||.+++.... .....+..||+.+++|+.+ ++|... .....+..+|+|+++.......
T Consensus 109 p~~r~~-~~~~~~~~~iyv~GG~~~~-~~~~~~~~yd~~~~~W~~~~~~p~~r-----~~~~~~~~~~~iyv~GG~~~~~ 181 (308)
T 1zgk_A 109 SVPRNR-IGVGVIDGHIYAVGGSHGC-IHHNSVERYEPERDEWHLVAPMLTRR-----IGVGVAVLNRLLYAVGGFDGTN 181 (308)
T ss_dssp SSCCBT-CEEEEETTEEEEECCEETT-EECCCEEEEETTTTEEEECCCCSSCC-----BSCEEEEETTEEEEECCBCSSC
T ss_pred CcCccc-cEEEEECCEEEEEcCCCCC-cccccEEEECCCCCeEeECCCCCccc-----cceEEEEECCEEEEEeCCCCCC
Confidence 543211 1667789999999875431 1123689999999999988 455433 2345667799999998765321
Q ss_pred -eEEEEEEC---CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCceeeeeEEEecCC
Q 016891 274 -PVDIWVLM---GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGAAADQVTIHGVP 349 (381)
Q Consensus 274 -~~~iW~l~---~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~~~~~v~~~~~~ 349 (381)
.-++|.++ .+|.++..++.. .......+. ++. |++.+ |.+.......++.||+++++| +++.-....
T Consensus 182 ~~~~~~~yd~~~~~W~~~~~~p~~--r~~~~~~~~-~~~-iyv~G---G~~~~~~~~~v~~yd~~~~~W--~~~~~~p~~ 252 (308)
T 1zgk_A 182 RLNSAECYYPERNEWRMITAMNTI--RSGAGVCVL-HNC-IYAAG---GYDGQDQLNSVERYDVETETW--TFVAPMKHR 252 (308)
T ss_dssp BCCCEEEEETTTTEEEECCCCSSC--CBSCEEEEE-TTE-EEEEC---CBCSSSBCCCEEEEETTTTEE--EECCCCSSC
T ss_pred cCceEEEEeCCCCeEeeCCCCCCc--cccceEEEE-CCE-EEEEe---CCCCCCccceEEEEeCCCCcE--EECCCCCCC
Confidence 22455555 899987655521 112222223 454 87773 111111235699999999999 888422211
Q ss_pred CCceeEEEEeeceecCcCC
Q 016891 350 QGCRDTIVCVDSLVSLAAC 368 (381)
Q Consensus 350 ~~~~~~~~y~~sl~~~~~~ 368 (381)
-..+.+..+.+.|.-+.+.
T Consensus 253 r~~~~~~~~~~~i~v~GG~ 271 (308)
T 1zgk_A 253 RSALGITVHQGRIYVLGGY 271 (308)
T ss_dssp CBSCEEEEETTEEEEECCB
T ss_pred ccceEEEEECCEEEEEcCc
Confidence 1114455566666655543
No 11
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.24 E-value=1.4e-09 Score=101.25 Aligned_cols=240 Identities=10% Similarity=0.042 Sum_probs=136.7
Q ss_pred CcEEEEee--CCCcEEEEccC--CcceeeCCCCC-CCCCCceEEEEEeEECCCCCEEEEEEEEEee-cC--cc-ceEEEE
Q 016891 109 NGLIAFKN--DENGIALWNPS--TEEHLILPKFW-GDLKDFMVVDGFGYDAVNDDYKVVRLVQLVI-GN--VG-YTEIAV 179 (381)
Q Consensus 109 ~GLl~~~~--~~~~~~V~NP~--T~~~~~LP~~~-~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~-~~--~~-~~~~~v 179 (381)
+|.|.+.. ..+.++++||. +++|..+++.+ ...... ..+.+ ++ +++.+..... .. .. ...+++
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~-~~~~~------~~-~lyv~GG~~~~~~~~~~~~~~v~~ 90 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQA-TSAFI------DG-NLYVFGGIGKNSEGLTQVFNDVHK 90 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSC-EEEEE------TT-EEEEECCEEECTTSCEEECCCEEE
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccc-eEEEE------CC-EEEEEcCCCCCCCccceeeccEEE
Confidence 66665443 34579999998 59999999876 333221 22222 12 4555543211 11 11 267999
Q ss_pred EEcCCCcEEEcccCCCcceecCC-CcEEECCeeEEEEeeCCCC---------------------------------CCcC
Q 016891 180 YSLRTNSWRRIRVDFPYYILHGW-DGTFADGHVHWLVTNNPED---------------------------------YIEN 225 (381)
Q Consensus 180 yss~t~~W~~~~~~~p~~~~~~~-~~v~~nG~lYwl~~~~~~~---------------------------------~~~~ 225 (381)
|++.+++|+.+. .++ ...+.. ..+.++|.||.+++..... ....
T Consensus 91 yd~~~~~W~~~~-~~~-p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (357)
T 2uvk_A 91 YNPKTNSWVKLM-SHA-PMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNK 168 (357)
T ss_dssp EETTTTEEEECS-CCC-SSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCC
T ss_pred EeCCCCcEEECC-CCC-CcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcc
Confidence 999999999998 544 122222 5577999999999753210 0123
Q ss_pred EEEEEECCCCeeeee-cCCCCCCCCCceeEEEEEECCeEEEEEecCC----CceEEEEEE--C-CceeEEEEecCCCCCe
Q 016891 226 LIIAFNLKSEEFHEV-PLPHLENRNDVLVMFVGNFSGCLYFSCLCNY----PQPVDIWVL--M-GCWTKTFSFPRSVGDY 297 (381)
Q Consensus 226 ~i~~fD~~~e~~~~i-~~P~~~~~~~~~~~~L~~~~G~L~~~~~~~~----~~~~~iW~l--~-~~W~~~~~i~~~~~~~ 297 (381)
.+..||+.+++|+.+ ++|.... ....++..+|+|+++..... ...+.++.+ + ..|.++..++......
T Consensus 169 ~v~~yd~~~~~W~~~~~~p~~~~----~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~ 244 (357)
T 2uvk_A 169 FLLSFDPSTQQWSYAGESPWYGT----AGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVA 244 (357)
T ss_dssp EEEEEETTTTEEEEEEECSSCCC----BSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCB
T ss_pred cEEEEeCCCCcEEECCCCCCCCc----ccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccc
Confidence 799999999999988 5554321 22467778999999986532 113333444 3 8899876664211111
Q ss_pred eEEEEEEeCCCEEEEEecccCCccc-----------------cCCcEEEEEeCCCCceeeeeEEEecCCCCceeEEEEee
Q 016891 298 VKALAYSKSGGKVLVDKFEYGEDED-----------------INRWELFWYDLQNQGAAADQVTIHGVPQGCRDTIVCVD 360 (381)
Q Consensus 298 ~~~~~~~~~g~~i~l~~~~~~~~~~-----------------~~~~~l~~yd~~t~~~~~~~v~~~~~~~~~~~~~~y~~ 360 (381)
..... ..++. |++.+ |.+.. ..-..+.+||+++++| +++.-...+-..+.+..+.+
T Consensus 245 ~~~~~-~~~~~-iyv~G---G~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W--~~~~~~p~~r~~~~~~~~~~ 317 (357)
T 2uvk_A 245 GGFAG-ISNDS-LIFAG---GAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKW--DKSGELSQGRAYGVSLPWNN 317 (357)
T ss_dssp SCEEE-EETTE-EEEEC---CEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---C--EEEEECSSCCBSSEEEEETT
T ss_pred cceEE-EECCE-EEEEc---CccccCCcccccccceeccccccceeeEEEEecCCCce--eeCCCCCCCcccceeEEeCC
Confidence 12222 23455 77773 10000 0003588999999999 88843222211144555666
Q ss_pred ceecCcCCC
Q 016891 361 SLVSLAACA 369 (381)
Q Consensus 361 sl~~~~~~~ 369 (381)
.|.-+.+..
T Consensus 318 ~i~v~GG~~ 326 (357)
T 2uvk_A 318 SLLIIGGET 326 (357)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEeeeC
Confidence 666555543
No 12
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.24 E-value=9.6e-10 Score=100.55 Aligned_cols=226 Identities=11% Similarity=0.064 Sum_probs=132.9
Q ss_pred CcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeec--C--ccc-eEEEEEEcCCCcEEEcccC
Q 016891 119 NGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIG--N--VGY-TEIAVYSLRTNSWRRIRVD 193 (381)
Q Consensus 119 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~--~--~~~-~~~~vyss~t~~W~~~~~~ 193 (381)
..+.++||.|++|.. ++.+...++....+.. ..+ +++.+...... . ... ..+++|+..+++|+.++ .
T Consensus 13 ~~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~----~~~--~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~-~ 84 (315)
T 4asc_A 13 EGAVAYDPAANECYC-ASLSSQVPKNHVSLVT----KEN--QVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMP-P 84 (315)
T ss_dssp TEEEEEETTTTEEEE-EECCCCSCSSEEEEEC----TTC--CEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECC-C
T ss_pred CceEEECCCCCeEec-CCCCCCCCccceEEEE----ECC--EEEEEcCcccCCCCCccccccceEEecCCCCeEEECC-C
Confidence 578999999999986 3333222222221111 122 34444432111 1 112 45999999999999998 6
Q ss_pred CCcceecCCCcEEECCeeEEEEeeCC--CCCCcCEEEEEECCCCeeeee-cCCCCCCCCCceeEEEEEECCeEEEEEecC
Q 016891 194 FPYYILHGWDGTFADGHVHWLVTNNP--EDYIENLIIAFNLKSEEFHEV-PLPHLENRNDVLVMFVGNFSGCLYFSCLCN 270 (381)
Q Consensus 194 ~p~~~~~~~~~v~~nG~lYwl~~~~~--~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~~~L~~~~G~L~~~~~~~ 270 (381)
+|..... ...+.++|.+|.+++... .......+..||+.+.+|+.+ ++|... ....++..+|+|+++....
T Consensus 85 ~p~~r~~-~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r-----~~~~~~~~~~~iyv~GG~~ 158 (315)
T 4asc_A 85 LPSPRCL-FGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVV-----YGHTVLSHMDLVYVIGGKG 158 (315)
T ss_dssp BSSCEES-CEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCC-----BSCEEEEETTEEEEECCBC
T ss_pred CCcchhc-eeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcc-----cceeEEEECCEEEEEeCCC
Confidence 6643222 266788999999987531 122334699999999999988 555433 3346677899999999872
Q ss_pred -C-CceEEEEEEC---CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCceeeeeEEE
Q 016891 271 -Y-PQPVDIWVLM---GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGAAADQVTI 345 (381)
Q Consensus 271 -~-~~~~~iW~l~---~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~~~~~v~~ 345 (381)
. ...-++|.++ .+|.++..++.. .......+. ++. |++.+ |.+.......+..||+++++| +.+.-
T Consensus 159 ~~~~~~~~~~~yd~~~~~W~~~~~~p~~--r~~~~~~~~-~~~-iyv~G---G~~~~~~~~~~~~yd~~~~~W--~~~~~ 229 (315)
T 4asc_A 159 SDRKCLNKMCVYDPKKFEWKELAPMQTA--RSLFGATVH-DGR-IIVAA---GVTDTGLTSSAEVYSITDNKW--APFEA 229 (315)
T ss_dssp TTSCBCCCEEEEETTTTEEEECCCCSSC--CBSCEEEEE-TTE-EEEEE---EECSSSEEEEEEEEETTTTEE--EEECC
T ss_pred CCCcccceEEEEeCCCCeEEECCCCCCc--hhceEEEEE-CCE-EEEEe---ccCCCCccceEEEEECCCCeE--EECCC
Confidence 2 1123566665 899987655521 112222222 555 77773 111111124699999999999 88842
Q ss_pred ecCCCCceeEEEEeeceecCcC
Q 016891 346 HGVPQGCRDTIVCVDSLVSLAA 367 (381)
Q Consensus 346 ~~~~~~~~~~~~y~~sl~~~~~ 367 (381)
...+-..+.+..+.+.|.-+.+
T Consensus 230 ~p~~r~~~~~~~~~~~l~v~GG 251 (315)
T 4asc_A 230 FPQERSSLSLVSLVGTLYAIGG 251 (315)
T ss_dssp CSSCCBSCEEEEETTEEEEEEE
T ss_pred CCCcccceeEEEECCEEEEECC
Confidence 2211111445555555554443
No 13
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.09 E-value=8.6e-09 Score=94.30 Aligned_cols=227 Identities=12% Similarity=0.118 Sum_probs=131.9
Q ss_pred cEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEee--cC--ccc-eEEEEEEcCCCcEEEcccCC
Q 016891 120 GIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVI--GN--VGY-TEIAVYSLRTNSWRRIRVDF 194 (381)
Q Consensus 120 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~--~~--~~~-~~~~vyss~t~~W~~~~~~~ 194 (381)
...++||.+++|...|.+ ...+.....+ .. . ++ +++.+..... .. ... ..+++|+..+++|+.++ .+
T Consensus 25 ~~~~yd~~~~~W~~~~~~-~~~~r~~~~~-~~---~-~~-~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~-~~ 96 (318)
T 2woz_A 25 AAVAYDPMENECYLTALA-EQIPRNHSSI-VT---Q-QN-QVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLP-PL 96 (318)
T ss_dssp EEEEEETTTTEEEEEEEC-TTSCSSEEEE-EC---S-SS-CEEEEESSCC-------CCCBEEEEEETTTTEEEECS-CB
T ss_pred ceEEECCCCCceecccCC-ccCCccceEE-EE---E-CC-EEEEECCcccCccccCCCccccEEEEeCCCCcEEECC-CC
Confidence 478999999999984422 1122222111 11 1 12 3444432100 01 011 35899999999999998 66
Q ss_pred CcceecCCCcEEECCeeEEEEeeCC-CCCCcCEEEEEECCCCeeeee-cCCCCCCCCCceeEEEEEECCeEEEEEecCC-
Q 016891 195 PYYILHGWDGTFADGHVHWLVTNNP-EDYIENLIIAFNLKSEEFHEV-PLPHLENRNDVLVMFVGNFSGCLYFSCLCNY- 271 (381)
Q Consensus 195 p~~~~~~~~~v~~nG~lYwl~~~~~-~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~~~L~~~~G~L~~~~~~~~- 271 (381)
|.... ....+.++|.||.+++... .......+..||+.+.+|+.+ ++|... ....++..+|+|+++.....
T Consensus 97 p~~r~-~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r-----~~~~~~~~~~~iyv~GG~~~~ 170 (318)
T 2woz_A 97 PSARC-LFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKV-----YGHNVISHNGMIYCLGGKTDD 170 (318)
T ss_dssp SSCBC-SCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCE-----ESCEEEEETTEEEEECCEESS
T ss_pred Ccccc-ccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcc-----cccEEEEECCEEEEEcCCCCC
Confidence 64322 1166778999999998652 122233689999999999988 555433 23456668999999987531
Q ss_pred -CceEEEEEEC---CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCceeeeeEEEec
Q 016891 272 -PQPVDIWVLM---GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGAAADQVTIHG 347 (381)
Q Consensus 272 -~~~~~iW~l~---~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~~~~~v~~~~ 347 (381)
...-++|.++ .+|.++..++.. ......++. ++. |++.+ |.+.......+..||+++++| +++.-..
T Consensus 171 ~~~~~~~~~yd~~~~~W~~~~~~p~~--r~~~~~~~~-~~~-iyv~G---G~~~~~~~~~~~~yd~~~~~W--~~~~~~p 241 (318)
T 2woz_A 171 KKCTNRVFIYNPKKGDWKDLAPMKTP--RSMFGVAIH-KGK-IVIAG---GVTEDGLSASVEAFDLKTNKW--EVMTEFP 241 (318)
T ss_dssp SCBCCCEEEEETTTTEEEEECCCSSC--CBSCEEEEE-TTE-EEEEE---EEETTEEEEEEEEEETTTCCE--EECCCCS
T ss_pred CCccceEEEEcCCCCEEEECCCCCCC--cccceEEEE-CCE-EEEEc---CcCCCCccceEEEEECCCCeE--EECCCCC
Confidence 1123466666 899987655421 112222333 454 77773 111111124689999999999 8884222
Q ss_pred CCCCceeEEEEeeceecCcCCC
Q 016891 348 VPQGCRDTIVCVDSLVSLAACA 369 (381)
Q Consensus 348 ~~~~~~~~~~y~~sl~~~~~~~ 369 (381)
..-..+.+..+.+.|.-+.+..
T Consensus 242 ~~r~~~~~~~~~~~i~v~GG~~ 263 (318)
T 2woz_A 242 QERSSISLVSLAGSLYAIGGFA 263 (318)
T ss_dssp SCCBSCEEEEETTEEEEECCBC
T ss_pred CcccceEEEEECCEEEEECCee
Confidence 1111145566666666555443
No 14
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=99.05 E-value=1.8e-11 Score=80.55 Aligned_cols=42 Identities=24% Similarity=0.402 Sum_probs=38.8
Q ss_pred CCCCcHHHHHHHHccCCccceeEEEeehhhhhhhccChhHHH
Q 016891 1 MAGLPTDINIDILSRLSVKCLLRFKCVSKSFCSLIDSQEFIK 42 (381)
Q Consensus 1 ~~~LPdDll~eIL~rLP~~~l~r~r~VcK~W~~li~~p~F~~ 42 (381)
++.||+|++.+||++||++++.++++|||+|++++.++.|.+
T Consensus 9 ~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~lW~ 50 (53)
T 1fs1_A 9 WDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQ 50 (53)
T ss_dssp CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGGC-
T ss_pred HHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHH
Confidence 468999999999999999999999999999999999998754
No 15
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.05 E-value=2.8e-08 Score=92.28 Aligned_cols=205 Identities=12% Similarity=0.125 Sum_probs=118.1
Q ss_pred CcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecC---------------------------
Q 016891 119 NGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGN--------------------------- 171 (381)
Q Consensus 119 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~--------------------------- 171 (381)
+.++++||.|.+|..+++.+ ........+.. ++ + +++.+.......
T Consensus 86 ~~v~~yd~~~~~W~~~~~~~-p~~r~~~~~~~-~~----~-~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (357)
T 2uvk_A 86 NDVHKYNPKTNSWVKLMSHA-PMGMAGHVTFV-HN----G-KAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFD 158 (357)
T ss_dssp CCEEEEETTTTEEEECSCCC-SSCCSSEEEEE-ET----T-EEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHS
T ss_pred ccEEEEeCCCCcEEECCCCC-CcccccceEEE-EC----C-EEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhcc
Confidence 57899999999999998765 11222221111 11 1 555554321110
Q ss_pred -----cc-ceEEEEEEcCCCcEEEcccCCCcceecCCCcEEECCeeEEEEeeCCCCCCcCEEEEEEC--CCCeeeee-cC
Q 016891 172 -----VG-YTEIAVYSLRTNSWRRIRVDFPYYILHGWDGTFADGHVHWLVTNNPEDYIENLIIAFNL--KSEEFHEV-PL 242 (381)
Q Consensus 172 -----~~-~~~~~vyss~t~~W~~~~~~~p~~~~~~~~~v~~nG~lYwl~~~~~~~~~~~~i~~fD~--~~e~~~~i-~~ 242 (381)
.. ...+++|+..+++|+.+. .+|.........+.++|.||.+++..........+..||+ .+.+|+.+ ++
T Consensus 159 ~~~~~~~~~~~v~~yd~~~~~W~~~~-~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~ 237 (357)
T 2uvk_A 159 KKAEDYFFNKFLLSFDPSTQQWSYAG-ESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPV 237 (357)
T ss_dssp SCGGGGCCCCEEEEEETTTTEEEEEE-ECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCS
T ss_pred ccccccCCcccEEEEeCCCCcEEECC-CCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCC
Confidence 01 158999999999999998 6664322223667889999999865321111235777876 89999987 34
Q ss_pred CCCCCCCCceeEEEEEECCeEEEEEecCCC------------------ceEEEEEEC---CceeEEEEecCCCCCeeEEE
Q 016891 243 PHLENRNDVLVMFVGNFSGCLYFSCLCNYP------------------QPVDIWVLM---GCWTKTFSFPRSVGDYVKAL 301 (381)
Q Consensus 243 P~~~~~~~~~~~~L~~~~G~L~~~~~~~~~------------------~~~~iW~l~---~~W~~~~~i~~~~~~~~~~~ 301 (381)
|.... .....++..+|+|+++...... ...++|.++ .+|.++..++... ....
T Consensus 238 ~~~~~---~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r--~~~~- 311 (357)
T 2uvk_A 238 SSPDG---VAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGR--AYGV- 311 (357)
T ss_dssp STTTC---CBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCC--BSSE-
T ss_pred CCCcc---cccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCc--ccce-
Confidence 32221 1234577889999999874311 013344444 8999987776221 1122
Q ss_pred EEEeCCCEEEEEecccCCccccC-CcEEEEEeCCCCceeeeeE
Q 016891 302 AYSKSGGKVLVDKFEYGEDEDIN-RWELFWYDLQNQGAAADQV 343 (381)
Q Consensus 302 ~~~~~g~~i~l~~~~~~~~~~~~-~~~l~~yd~~t~~~~~~~v 343 (381)
++..++. |++.+ |++.... -..++.+++++++| ...
T Consensus 312 ~~~~~~~-i~v~G---G~~~~~~~~~~v~~l~~~~~~~--~~~ 348 (357)
T 2uvk_A 312 SLPWNNS-LLIIG---GETAGGKAVTDSVLITVKDNKV--TVQ 348 (357)
T ss_dssp EEEETTE-EEEEE---EECGGGCEEEEEEEEEC-CCSC--EEE
T ss_pred eEEeCCE-EEEEe---eeCCCCCEeeeEEEEEEcCcEe--Eee
Confidence 2233555 77763 1121111 24699999999999 444
No 16
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=99.00 E-value=6e-11 Score=105.82 Aligned_cols=48 Identities=19% Similarity=0.350 Sum_probs=45.3
Q ss_pred CCCCcHHHHHHHHccCCcccee-EEEeehhhhhhhccChhHHHHHHhcc
Q 016891 1 MAGLPTDINIDILSRLSVKCLL-RFKCVSKSFCSLIDSQEFIKIHLKRS 48 (381)
Q Consensus 1 ~~~LPdDll~eIL~rLP~~~l~-r~r~VcK~W~~li~~p~F~~~~~~~~ 48 (381)
|+.||+|||.+||+|||+++|+ |+++|||+|++++++|.|.+.+..+.
T Consensus 51 ~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~~~~~~~ 99 (297)
T 2e31_A 51 LAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQQE 99 (297)
T ss_dssp TTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHHHHHHHT
T ss_pred hhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHHHHhhcc
Confidence 5689999999999999999999 99999999999999999999987765
No 17
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.96 E-value=8e-07 Score=84.76 Aligned_cols=286 Identities=12% Similarity=0.079 Sum_probs=144.7
Q ss_pred CCCCcHHHHHHHHccCCccceeEEEeehhhhhhhccChhHHHHHHhcccccCCCeeEEecCCCCCcCCCCCcccceEEee
Q 016891 1 MAGLPTDINIDILSRLSVKCLLRFKCVSKSFCSLIDSQEFIKIHLKRSIETNSNLSLILSGTPAPILDSSRYWGGKIFSA 80 (381)
Q Consensus 1 ~~~LPdDll~eIL~rLP~~~l~r~r~VcK~W~~li~~p~F~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 80 (381)
++.||+|++.+||++|++++|.++++|||+|+.++.++.+.+.......... ...........+...... |+ ..|.-
T Consensus 19 ~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~~w~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-wk-~~~~~ 95 (445)
T 2ovr_B 19 ISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDE-PLHIKRRKVIKPGFIHSP-WK-SAYIR 95 (445)
T ss_dssp TTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHHHHHHHTTTTCCS-CCCCCC--CCSSCCCCCH-HH-HHHHH
T ss_pred hHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCchhHhhhheeeccccc-ccccccceecCCCccCCc-HH-HHHhh
Confidence 4689999999999999999999999999999999999988887654322110 000000000000000000 00 00000
Q ss_pred cCCCCCCcccccC----CCCCCCCC-eeEEcccCcEEEEeeCCCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECC
Q 016891 81 GLDSLNLGVELDH----PFKNCKGR-TPIIDSCNGLIAFKNDENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAV 155 (381)
Q Consensus 81 ~~~~~~~~~~~~~----p~~~~~~~-~~~~~s~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~ 155 (381)
...-..++..-.. -+.+.... ...+...+.+|+....+..+.|||..+++...--.. +. .....+.++
T Consensus 96 ~~~~~~~w~~~~~~~~~~l~~h~~~v~~~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~---h~--~~v~~~~~~-- 168 (445)
T 2ovr_B 96 QHRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVG---HT--GGVWSSQMR-- 168 (445)
T ss_dssp HHHHHHHHHHSCCCCCEEEECSTTSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEECCC---CS--SCEEEEEEE--
T ss_pred hhhhhhcccCCCcceeEEecccCCCcEEEEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcC---CC--CCEEEEEec--
Confidence 0000000000000 00111111 234455566666666778899999998876542211 11 123334444
Q ss_pred CCCEEEEEEEEEeecCccceEEEEEEcCCCcEEEcccCCCcceecCCCcEEECCeeEEEEeeCCCCCCcCEEEEEECCCC
Q 016891 156 NDDYKVVRLVQLVIGNVGYTEIAVYSLRTNSWRRIRVDFPYYILHGWDGTFADGHVHWLVTNNPEDYIENLIIAFNLKSE 235 (381)
Q Consensus 156 ~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W~~~~~~~p~~~~~~~~~v~~nG~lYwl~~~~~~~~~~~~i~~fD~~~e 235 (381)
+++ +.... . ...+.+|+..++.-...-....... ..+.+++.....+..+. .|..+|+.+.
T Consensus 169 -~~~--l~s~~--~----dg~i~vwd~~~~~~~~~~~~h~~~v----~~~~~~~~~l~s~s~dg------~i~~wd~~~~ 229 (445)
T 2ovr_B 169 -DNI--IISGS--T----DRTLKVWNAETGECIHTLYGHTSTV----RCMHLHEKRVVSGSRDA------TLRVWDIETG 229 (445)
T ss_dssp -TTE--EEEEE--T----TSCEEEEETTTTEEEEEECCCSSCE----EEEEEETTEEEEEETTS------EEEEEESSSC
T ss_pred -CCE--EEEEe--C----CCeEEEEECCcCcEEEEECCCCCcE----EEEEecCCEEEEEeCCC------EEEEEECCCC
Confidence 222 22221 1 1467888887764322110111111 34455565544444332 7999999876
Q ss_pred eeee-ecCCCCCCCCCceeEEEEEECCeEEEEEecCCCceEEEEEEC-CceeEEEEecCCCCCeeEEEEEEeCCCEEEEE
Q 016891 236 EFHE-VPLPHLENRNDVLVMFVGNFSGCLYFSCLCNYPQPVDIWVLM-GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVD 313 (381)
Q Consensus 236 ~~~~-i~~P~~~~~~~~~~~~L~~~~G~L~~~~~~~~~~~~~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~ 313 (381)
+... +..... .+.-...+|...++...++ .+.+|.++ .+ .+..+.... . .+.++.-++..++..
T Consensus 230 ~~~~~~~~~~~-------~v~~~~~~~~~l~~~~~dg--~i~iwd~~~~~--~~~~~~~~~-~--~v~~~~~~~~~l~~~ 295 (445)
T 2ovr_B 230 QCLHVLMGHVA-------AVRCVQYDGRRVVSGAYDF--MVKVWDPETET--CLHTLQGHT-N--RVYSLQFDGIHVVSG 295 (445)
T ss_dssp CEEEEEECCSS-------CEEEEEECSSCEEEEETTS--CEEEEEGGGTE--EEEEECCCS-S--CEEEEEECSSEEEEE
T ss_pred cEEEEEcCCcc-------cEEEEEECCCEEEEEcCCC--EEEEEECCCCc--EeEEecCCC-C--ceEEEEECCCEEEEE
Confidence 5432 222111 1222333777767666655 79999887 32 233333111 1 222333367745555
Q ss_pred ecccCCccccCCcEEEEEeCCCCce
Q 016891 314 KFEYGEDEDINRWELFWYDLQNQGA 338 (381)
Q Consensus 314 ~~~~~~~~~~~~~~l~~yd~~t~~~ 338 (381)
..+..+.+||+++++.
T Consensus 296 ---------~~d~~i~i~d~~~~~~ 311 (445)
T 2ovr_B 296 ---------SLDTSIRVWDVETGNC 311 (445)
T ss_dssp ---------ETTSCEEEEETTTCCE
T ss_pred ---------eCCCeEEEEECCCCCE
Confidence 3556799999998876
No 18
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=98.93 E-value=2.4e-08 Score=101.23 Aligned_cols=206 Identities=12% Similarity=0.095 Sum_probs=121.4
Q ss_pred CCcEEEEccCCcceeeCC-CCC---CCCCCce-EEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCCcEEEccc
Q 016891 118 ENGIALWNPSTEEHLILP-KFW---GDLKDFM-VVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTNSWRRIRV 192 (381)
Q Consensus 118 ~~~~~V~NP~T~~~~~LP-~~~---~~~~~~~-~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W~~~~~ 192 (381)
.+.++++||.+++|..++ +.+ ...++.. ..+.+. . ++ +++.+............+++|+..+++|+.++
T Consensus 411 ~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~---~-~~-~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~- 484 (695)
T 2zwa_A 411 VNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTIS---R-NN-QLLLIGGRKAPHQGLSDNWIFDMKTREWSMIK- 484 (695)
T ss_dssp CCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEET---T-TT-EEEEECCBSSTTCBCCCCEEEETTTTEEEECC-
T ss_pred cCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEc---c-CC-EEEEEcCCCCCCCccccEEEEeCCCCcEEECC-
Confidence 357899999999999998 521 1111111 222220 0 22 45555432111111267999999999999998
Q ss_pred CCCcceecCCCcEEE-CCeeEEEEeeCCCCCCcCEEEEEECCCCeeeeec----CCCCCCCCCceeEEEEEEC---CeEE
Q 016891 193 DFPYYILHGWDGTFA-DGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEVP----LPHLENRNDVLVMFVGNFS---GCLY 264 (381)
Q Consensus 193 ~~p~~~~~~~~~v~~-nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~----~P~~~~~~~~~~~~L~~~~---G~L~ 264 (381)
.+|...... ..+.+ +|.||.+++..... .+.+||+.+++|+.+. +|.... ....+.++ |+|+
T Consensus 485 ~~p~~R~~h-~~~~~~~~~iyv~GG~~~~~----~v~~yd~~t~~W~~~~~~g~~p~~r~-----~~~a~v~~~~~~~iy 554 (695)
T 2zwa_A 485 SLSHTRFRH-SACSLPDGNVLILGGVTEGP----AMLLYNVTEEIFKDVTPKDEFFQNSL-----VSAGLEFDPVSKQGI 554 (695)
T ss_dssp CCSBCCBSC-EEEECTTSCEEEECCBCSSC----SEEEEETTTTEEEECCCSSGGGGSCC-----BSCEEEEETTTTEEE
T ss_pred CCCCCcccc-eEEEEcCCEEEEECCCCCCC----CEEEEECCCCceEEccCCCCCCCccc-----ceeEEEEeCCCCEEE
Confidence 666432211 45554 99999998765322 6999999999999885 343321 22223333 8999
Q ss_pred EEEecCCC---ceEEEEEEC---Cc------eeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCcccc---CCcEEE
Q 016891 265 FSCLCNYP---QPVDIWVLM---GC------WTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDI---NRWELF 329 (381)
Q Consensus 265 ~~~~~~~~---~~~~iW~l~---~~------W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~---~~~~l~ 329 (381)
+++..... ..-++|.++ .. |.++..+++ .........+.+++. |++.+ |.+... ....++
T Consensus 555 v~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~-~~R~~~~~~~~~~~~-iyv~G---G~~~~~~~~~~~~v~ 629 (695)
T 2zwa_A 555 ILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPL-FQRYGSQIKYITPRK-LLIVG---GTSPSGLFDRTNSII 629 (695)
T ss_dssp EECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGG-GCCBSCEEEEEETTE-EEEEC---CBCSSCCCCTTTSEE
T ss_pred EECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCC-CCcccceEEEeCCCE-EEEEC---CccCCCCCCCCCeEE
Confidence 99876321 123455544 66 887776432 112223333443355 77773 111111 234699
Q ss_pred EEeCCCCceeeeeEEEe
Q 016891 330 WYDLQNQGAAADQVTIH 346 (381)
Q Consensus 330 ~yd~~t~~~~~~~v~~~ 346 (381)
.||+++++| +.+.++
T Consensus 630 ~yd~~t~~W--~~~~~p 644 (695)
T 2zwa_A 630 SLDPLSETL--TSIPIS 644 (695)
T ss_dssp EEETTTTEE--EECCCC
T ss_pred EEECCCCeE--EEeecc
Confidence 999999999 866543
No 19
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.84 E-value=3.1e-06 Score=80.92 Aligned_cols=43 Identities=21% Similarity=0.341 Sum_probs=38.1
Q ss_pred CCCcHHHHHHHHccCCccceeEEEeehhhhhhhccC-hhHHHHH
Q 016891 2 AGLPTDINIDILSRLSVKCLLRFKCVSKSFCSLIDS-QEFIKIH 44 (381)
Q Consensus 2 ~~LPdDll~eIL~rLP~~~l~r~r~VcK~W~~li~~-p~F~~~~ 44 (381)
+.||+|++.+||+.||+++|.+++.|||+|+.++.+ +...+.+
T Consensus 16 ~~lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~~w~~~ 59 (464)
T 3v7d_B 16 TSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRKSTSLWKKL 59 (464)
T ss_dssp HHSCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTTCHHHHHHH
T ss_pred HHCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 469999999999999999999999999999999998 6654443
No 20
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.81 E-value=2.5e-07 Score=88.19 Aligned_cols=289 Identities=12% Similarity=0.088 Sum_probs=140.4
Q ss_pred CCCcHH----HHHHHHccCCccceeEEEeehhhhhhhccChhHHHHHHhccccc---------CCCe-eEEecCCCC-Cc
Q 016891 2 AGLPTD----INIDILSRLSVKCLLRFKCVSKSFCSLIDSQEFIKIHLKRSIET---------NSNL-SLILSGTPA-PI 66 (381)
Q Consensus 2 ~~LPdD----ll~eIL~rLP~~~l~r~r~VcK~W~~li~~p~F~~~~~~~~~~~---------~~~~-~l~~~~~~~-~~ 66 (381)
+.||+| ++.+||++|++++|.++++|||+|+.++.++.+.+....+.... ...+ ..++..... .-
T Consensus 12 ~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 91 (435)
T 1p22_A 12 TALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKKLIERMVRTDSLWRGLAERRGWGQYLFKNKPPDGN 91 (435)
T ss_dssp HHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHSSSGGGGCC--------
T ss_pred HHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhcCcchhhhhhhhccchhhhhhccCCCCCC
Confidence 469999 99999999999999999999999999999887776654332110 0000 000000000 00
Q ss_pred CCCCCcccceEEe--------e--cCCCCC-CcccccCCCCCCCCCeeEEcccCcEEEEeeCCCcEEEEccCCcceeeCC
Q 016891 67 LDSSRYWGGKIFS--------A--GLDSLN-LGVELDHPFKNCKGRTPIIDSCNGLIAFKNDENGIALWNPSTEEHLILP 135 (381)
Q Consensus 67 ~~~~~~~~~~~~~--------~--~~~~~~-~~~~~~~p~~~~~~~~~~~~s~~GLl~~~~~~~~~~V~NP~T~~~~~LP 135 (381)
.+...+.. .++. + .+.... ....+... .........+...+..++....+..+.|||..+++....-
T Consensus 92 ~~~~~~~~-~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~-~~~~~~v~~~~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~ 169 (435)
T 1p22_A 92 APPNSFYR-ALYPKIIQDIETIESNWRCGRHSLQRIHCR-SETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRIL 169 (435)
T ss_dssp -CCSHHHH-HHHHHHHHHHHHHHHHTTTCCCCCCCEECC-CSSCCCEEEEECCSSEEEEEESSSCEEEEESSSCCEEEEE
T ss_pred CCchhhHH-hhhhhhhcchhHHHhhhccCCccceEEecc-cCCCCcEEEEEECCCEEEEEeCCCeEEEEeCCCCeEEEEE
Confidence 00000000 0000 0 000000 00000000 0011223445555555555556778999999888765532
Q ss_pred CCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCCcEEEcccCCCcceecCCCcEEECCeeEEEE
Q 016891 136 KFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTNSWRRIRVDFPYYILHGWDGTFADGHVHWLV 215 (381)
Q Consensus 136 ~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W~~~~~~~p~~~~~~~~~v~~nG~lYwl~ 215 (381)
.. +. .....+.+| +.+ ++... . ...+.+|+..++.-...-....... ..+.+++.....+
T Consensus 170 ~~---h~--~~v~~l~~~---~~~--l~sg~--~----dg~i~vwd~~~~~~~~~~~~h~~~v----~~l~~~~~~l~s~ 229 (435)
T 1p22_A 170 TG---HT--GSVLCLQYD---ERV--IITGS--S----DSTVRVWDVNTGEMLNTLIHHCEAV----LHLRFNNGMMVTC 229 (435)
T ss_dssp CC---CS--SCEEEEECC---SSE--EEEEE--T----TSCEEEEESSSCCEEEEECCCCSCE----EEEECCTTEEEEE
T ss_pred cC---CC--CcEEEEEEC---CCE--EEEEc--C----CCeEEEEECCCCcEEEEEcCCCCcE----EEEEEcCCEEEEe
Confidence 21 11 123334442 222 22221 1 1467888888775332210111111 3444555544444
Q ss_pred eeCCCCCCcCEEEEEECCCCeeee-ecCCCCCCCCCceeEEEEEECCeEEEEEecCCCceEEEEEEC-CceeEEEEecCC
Q 016891 216 TNNPEDYIENLIIAFNLKSEEFHE-VPLPHLENRNDVLVMFVGNFSGCLYFSCLCNYPQPVDIWVLM-GCWTKTFSFPRS 293 (381)
Q Consensus 216 ~~~~~~~~~~~i~~fD~~~e~~~~-i~~P~~~~~~~~~~~~L~~~~G~L~~~~~~~~~~~~~iW~l~-~~W~~~~~i~~~ 293 (381)
..+. .|..+|+.+..-.. ....... ...+.-...+|...+....++ .+.||.++ .+ .+..+...
T Consensus 230 s~dg------~i~vwd~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~l~s~~~dg--~i~vwd~~~~~--~~~~~~~~ 295 (435)
T 1p22_A 230 SKDR------SIAVWDMASPTDITLRRVLVGH----RAAVNVVDFDDKYIVSASGDR--TIKVWNTSTCE--FVRTLNGH 295 (435)
T ss_dssp ETTS------CEEEEECSSSSCCEEEEEECCC----SSCEEEEEEETTEEEEEETTS--EEEEEETTTCC--EEEEEECC
T ss_pred eCCC------cEEEEeCCCCCCceeeeEecCC----CCcEEEEEeCCCEEEEEeCCC--eEEEEECCcCc--EEEEEcCC
Confidence 4332 68999988654321 1110011 012223333676666666655 79999888 32 33333311
Q ss_pred CCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCce
Q 016891 294 VGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGA 338 (381)
Q Consensus 294 ~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~ 338 (381)
. . .+.++.-++..++.. ..+..+.+||+++++.
T Consensus 296 ~-~--~v~~~~~~~~~l~~g---------~~dg~i~iwd~~~~~~ 328 (435)
T 1p22_A 296 K-R--GIACLQYRDRLVVSG---------SSDNTIRLWDIECGAC 328 (435)
T ss_dssp S-S--CEEEEEEETTEEEEE---------ETTSCEEEEETTTCCE
T ss_pred C-C--cEEEEEeCCCEEEEE---------eCCCeEEEEECCCCCE
Confidence 1 1 222333356634444 4556799999998776
No 21
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=98.41 E-value=6.9e-06 Score=83.18 Aligned_cols=182 Identities=9% Similarity=0.033 Sum_probs=112.7
Q ss_pred eEEEEEEcCCCcEEEcccCCC---cceecCC-CcEEE--CCeeEEEEeeCCCCCCcCEEEEEECCCCeeeee-cCCCCCC
Q 016891 175 TEIAVYSLRTNSWRRIRVDFP---YYILHGW-DGTFA--DGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEV-PLPHLEN 247 (381)
Q Consensus 175 ~~~~vyss~t~~W~~~~~~~p---~~~~~~~-~~v~~--nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~ 247 (381)
..+++|+..+++|+.+...+| ....+.. ..+.+ +|.+|.+++..........+..||+.+++|+.+ ++|...
T Consensus 412 ~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R- 490 (695)
T 2zwa_A 412 NEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTR- 490 (695)
T ss_dssp CCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCC-
T ss_pred CcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCc-
Confidence 679999999999999872211 1122222 66778 999999998654321233589999999999988 455432
Q ss_pred CCCceeEEEEEE-CCeEEEEEecCCCceEEEEEEC---CceeEEEEecCCC-CCeeEE-EEEEeCCCEEEEEecccCCcc
Q 016891 248 RNDVLVMFVGNF-SGCLYFSCLCNYPQPVDIWVLM---GCWTKTFSFPRSV-GDYVKA-LAYSKSGGKVLVDKFEYGEDE 321 (381)
Q Consensus 248 ~~~~~~~~L~~~-~G~L~~~~~~~~~~~~~iW~l~---~~W~~~~~i~~~~-~~~~~~-~~~~~~g~~i~l~~~~~~~~~ 321 (381)
.....+.+ +|+|++++...... ++|.++ ..|..+......+ ...... +.+..+.++|++.+ |.+.
T Consensus 491 ----~~h~~~~~~~~~iyv~GG~~~~~--~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~G---G~~~ 561 (695)
T 2zwa_A 491 ----FRHSACSLPDGNVLILGGVTEGP--AMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILG---GGFM 561 (695)
T ss_dssp ----BSCEEEECTTSCEEEECCBCSSC--SEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEEC---CBCT
T ss_pred ----ccceEEEEcCCEEEEECCCCCCC--CEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEEC---CcCC
Confidence 23456664 99999999876543 666666 8999876532111 111222 33333424588773 1111
Q ss_pred c--cCCcEEEEEeCCCCc------eeeeeEEEe-cCCCCceeEEEEe-eceecCcCC
Q 016891 322 D--INRWELFWYDLQNQG------AAADQVTIH-GVPQGCRDTIVCV-DSLVSLAAC 368 (381)
Q Consensus 322 ~--~~~~~l~~yd~~t~~------~~~~~v~~~-~~~~~~~~~~~y~-~sl~~~~~~ 368 (381)
. .....++.||+++++ | +++.-. ...-..+.+..+. +.|.-+.+.
T Consensus 562 ~~~~~~~~v~~yd~~~~~w~~~~~W--~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~ 616 (695)
T 2zwa_A 562 DQTTVSDKAIIFKYDAENATEPITV--IKKLQHPLFQRYGSQIKYITPRKLLIVGGT 616 (695)
T ss_dssp TSSCBCCEEEEEEECTTCSSCCEEE--EEEEECGGGCCBSCEEEEEETTEEEEECCB
T ss_pred CCCeeeCcEEEEEccCCccccceEE--EEcCCCCCCCcccceEEEeCCCEEEEECCc
Confidence 0 113569999999999 7 777432 1221125566666 666666554
No 22
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.38 E-value=3.2e-06 Score=85.17 Aligned_cols=228 Identities=11% Similarity=-0.027 Sum_probs=123.6
Q ss_pred EcccCcEEEEee--CCCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEc
Q 016891 105 IDSCNGLIAFKN--DENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSL 182 (381)
Q Consensus 105 ~~s~~GLl~~~~--~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss 182 (381)
....+|.|++.. ....+.++||.|++|..+++++..+... ..+.+ ..+ |++.+............+++|+.
T Consensus 249 ~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~-s~~~~----~dg--~iyv~GG~~~~~~~~~~~e~yd~ 321 (656)
T 1k3i_A 249 SMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQ-SSATM----SDG--RVFTIGGSWSGGVFEKNGEVYSP 321 (656)
T ss_dssp EECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSC-EEEEC----TTS--CEEEECCCCCSSSCCCCEEEEET
T ss_pred cCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCcccccc-ceEEe----cCC--eEEEEeCcccCCcccccceEeCC
Confidence 334577776554 3457999999999999998776543221 22211 012 45555431111112267999999
Q ss_pred CCCcEEEcccC--CCcceecCCCcEEECCeeEEEEeeCCCC---CCcCEEEEEECCCCeeeeecCCCCC----CCCCcee
Q 016891 183 RTNSWRRIRVD--FPYYILHGWDGTFADGHVHWLVTNNPED---YIENLIIAFNLKSEEFHEVPLPHLE----NRNDVLV 253 (381)
Q Consensus 183 ~t~~W~~~~~~--~p~~~~~~~~~v~~nG~lYwl~~~~~~~---~~~~~i~~fD~~~e~~~~i~~P~~~----~~~~~~~ 253 (381)
.+++|+.++.. .|.........+..+|.+|.+++.+... .....+..||+.++.|.....+... .......
T Consensus 322 ~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~ 401 (656)
T 1k3i_A 322 SSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCG 401 (656)
T ss_dssp TTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTC
T ss_pred CCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCC
Confidence 99999997511 1221111113445788999888543210 1123789999999988653111110 0000001
Q ss_pred EEEE--EECCeEEEEEecCC------Cc-eEEEEEEC---CceeEEE--EecCCCCCeeEEEEEEeCCCEEEEEec-ccC
Q 016891 254 MFVG--NFSGCLYFSCLCNY------PQ-PVDIWVLM---GCWTKTF--SFPRSVGDYVKALAYSKSGGKVLVDKF-EYG 318 (381)
Q Consensus 254 ~~L~--~~~G~L~~~~~~~~------~~-~~~iW~l~---~~W~~~~--~i~~~~~~~~~~~~~~~~g~~i~l~~~-~~~ 318 (381)
..+. ..+|+|+++..... .. ...|+..+ ..|.++. .++ .........+.++|+ |++.+- ..+
T Consensus 402 ~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp--~~R~~~~~~~l~~g~-i~v~GG~~~~ 478 (656)
T 1k3i_A 402 NAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLY--FARTFHTSVVLPDGS-TFITGGQRRG 478 (656)
T ss_dssp EEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCS--SCCBSCEEEECTTSC-EEEECCBSBC
T ss_pred ceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCC--CCcccCCeEECCCCC-EEEECCcccC
Confidence 1111 24899999987531 11 12455555 7898765 343 122223334445777 777731 000
Q ss_pred --CccccCCcEEEEEeCCCCceeeeeEE
Q 016891 319 --EDEDINRWELFWYDLQNQGAAADQVT 344 (381)
Q Consensus 319 --~~~~~~~~~l~~yd~~t~~~~~~~v~ 344 (381)
.+.......+.+||+++++| +.+.
T Consensus 479 ~~~~~~~~~~~v~~ydp~t~~W--~~~~ 504 (656)
T 1k3i_A 479 IPFEDSTPVFTPEIYVPEQDTF--YKQN 504 (656)
T ss_dssp CTTCCCSBCCCCEEEEGGGTEE--EECC
T ss_pred cCcCCCCcccceEEEcCCCCce--eecC
Confidence 00001124599999999999 8773
No 23
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.24 E-value=4.6e-06 Score=84.02 Aligned_cols=205 Identities=11% Similarity=-0.003 Sum_probs=112.0
Q ss_pred cEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCCcEEEcccCCCccee
Q 016891 120 GIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTNSWRRIRVDFPYYIL 199 (381)
Q Consensus 120 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W~~~~~~~p~~~~ 199 (381)
.+.++||.|++|..++..+..........++. .++ +++.+... ....+++|++.+++|+.+. .+|....
T Consensus 220 ~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~----~~g-~lyv~GG~-----~~~~v~~yd~~t~~W~~~~-~~~~~R~ 288 (656)
T 1k3i_A 220 LTSSWDPSTGIVSDRTVTVTKHDMFCPGISMD----GNG-QIVVTGGN-----DAKKTSLYDSSSDSWIPGP-DMQVARG 288 (656)
T ss_dssp EEEEECTTTCCBCCCEEEECSCCCSSCEEEEC----TTS-CEEEECSS-----STTCEEEEEGGGTEEEECC-CCSSCCS
T ss_pred EEEEEeCCCCcEEeCcccCCCCCCccccccCC----CCC-CEEEeCCC-----CCCceEEecCcCCceeECC-CCCcccc
Confidence 57899999999999986654332222111221 111 44444321 1136999999999999998 6654321
Q ss_pred cCCCcEEE-CCeeEEEEeeCCCCCCcCEEEEEECCCCeeeeec------CCCCCCCCCceeEEEEEECCeEEEEEecCC-
Q 016891 200 HGWDGTFA-DGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEVP------LPHLENRNDVLVMFVGNFSGCLYFSCLCNY- 271 (381)
Q Consensus 200 ~~~~~v~~-nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~------~P~~~~~~~~~~~~L~~~~G~L~~~~~~~~- 271 (381)
. ...+.+ ||++|.+++..........+..||+.+++|+.++ +|... ...+...++.++++...++
T Consensus 289 ~-~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~------~~~~~~~~~~iyv~Gg~~g~ 361 (656)
T 1k3i_A 289 Y-QSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTAD------KQGLYRSDNHAWLFGWKKGS 361 (656)
T ss_dssp S-CEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCC------TTGGGTTTCSCCEEECGGGC
T ss_pred c-cceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccccccccc------ccceeecCCceEEEECCCCc
Confidence 1 145667 9999999884322222346899999999999873 22221 0012224555555554331
Q ss_pred ------CceEEEEEEC-CceeEEEEecCC-----CC-CeeEEEEEEeCCCEEEEEecccCCccccCCc---EEEEEeCCC
Q 016891 272 ------PQPVDIWVLM-GCWTKTFSFPRS-----VG-DYVKALAYSKSGGKVLVDKFEYGEDEDINRW---ELFWYDLQN 335 (381)
Q Consensus 272 ------~~~~~iW~l~-~~W~~~~~i~~~-----~~-~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~---~l~~yd~~t 335 (381)
...+..|..+ ..|......... .. .....+.+...+++|++.+-.-.-+...... .+.+||+++
T Consensus 362 ~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~ 441 (656)
T 1k3i_A 362 VFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGT 441 (656)
T ss_dssp EEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTS
T ss_pred EEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCC
Confidence 2255666666 777753322211 00 0111222222233488773100000000011 689999999
Q ss_pred CceeeeeEE
Q 016891 336 QGAAADQVT 344 (381)
Q Consensus 336 ~~~~~~~v~ 344 (381)
++| .++.
T Consensus 442 ~~W--~~~~ 448 (656)
T 1k3i_A 442 SPN--TVFA 448 (656)
T ss_dssp CCE--EEEC
T ss_pred CCe--eEEc
Confidence 999 8773
No 24
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=97.91 E-value=1e-06 Score=77.77 Aligned_cols=49 Identities=22% Similarity=0.308 Sum_probs=44.7
Q ss_pred CCCcHHHHHHHHccCCccceeEEEeehhhhhhhccChhHHHHHHhcccc
Q 016891 2 AGLPTDINIDILSRLSVKCLLRFKCVSKSFCSLIDSQEFIKIHLKRSIE 50 (381)
Q Consensus 2 ~~LPdDll~eIL~rLP~~~l~r~r~VcK~W~~li~~p~F~~~~~~~~~~ 50 (381)
+.||+|++..||+.|++++|+++.+|||+||.+..|+...+.+..+..+
T Consensus 6 ~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~LWr~~l~rd~~ 54 (312)
T 3l2o_B 6 TRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRDLP 54 (312)
T ss_dssp HHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHHHHHHHHSSGG
T ss_pred HhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccchHHHHHHhccCC
Confidence 4699999999999999999999999999999999999998888776543
No 25
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=97.36 E-value=2.5e-05 Score=71.55 Aligned_cols=40 Identities=25% Similarity=0.424 Sum_probs=36.5
Q ss_pred CCCCcHHHHHHHHccCCccceeEEEeehhhhhhhccChhH
Q 016891 1 MAGLPTDINIDILSRLSVKCLLRFKCVSKSFCSLIDSQEF 40 (381)
Q Consensus 1 ~~~LPdDll~eIL~rLP~~~l~r~r~VcK~W~~li~~p~F 40 (381)
++.||+|++.+||.+|+.+++.+++.|||+|+.++.+|..
T Consensus 9 ~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~~~ 48 (336)
T 2ast_B 9 WDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESL 48 (336)
T ss_dssp SSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCSTT
T ss_pred hhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCchh
Confidence 4689999999999999999999999999999999877653
No 26
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=96.73 E-value=0.00018 Score=71.20 Aligned_cols=34 Identities=18% Similarity=0.208 Sum_probs=29.4
Q ss_pred CCCCcHHHHHHHHccCC-ccceeEEEeehhhhhhh
Q 016891 1 MAGLPTDINIDILSRLS-VKCLLRFKCVSKSFCSL 34 (381)
Q Consensus 1 ~~~LPdDll~eIL~rLP-~~~l~r~r~VcK~W~~l 34 (381)
++.||||++.+||++|| .+++.+++.|||+|+.+
T Consensus 6 ~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 6 ALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp ----CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred hhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 36899999999999999 99999999999999988
No 27
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=96.17 E-value=0.00062 Score=67.21 Aligned_cols=33 Identities=9% Similarity=0.097 Sum_probs=31.1
Q ss_pred CCCcHHHHHHHHccC-CccceeEEEeehhhhhhh
Q 016891 2 AGLPTDINIDILSRL-SVKCLLRFKCVSKSFCSL 34 (381)
Q Consensus 2 ~~LPdDll~eIL~rL-P~~~l~r~r~VcK~W~~l 34 (381)
+.||||++.+||++| |.+++.+++.|||+|+.+
T Consensus 14 ~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~ 47 (592)
T 3ogk_B 14 VATVDDVIEQVMTYITDPKDRDSASLVCRRWFKI 47 (592)
T ss_dssp CCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHH
T ss_pred CCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHh
Confidence 369999999999999 899999999999999987
No 28
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=95.87 E-value=0.27 Score=42.33 Aligned_cols=114 Identities=10% Similarity=0.052 Sum_probs=75.8
Q ss_pred EEECCeeEEEEeeCCCCCCcCEEEEEECCCCee-eeecCCCCCCCCCceeEEEEEECCeEEEEEecCCCceEEEEEEC-C
Q 016891 205 TFADGHVHWLVTNNPEDYIENLIIAFNLKSEEF-HEVPLPHLENRNDVLVMFVGNFSGCLYFSCLCNYPQPVDIWVLM-G 282 (381)
Q Consensus 205 v~~nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~-~~i~~P~~~~~~~~~~~~L~~~~G~L~~~~~~~~~~~~~iW~l~-~ 282 (381)
.+.+|.||.-.+....+ .|..+|+.+.+- ..+++|... +..-+...+++|+++..... .+|+.+ .
T Consensus 27 ~~~~~~LyestG~~g~S----~v~~vD~~tgkv~~~~~l~~~~-----fgeGi~~~~~~ly~ltw~~~----~v~v~D~~ 93 (243)
T 3mbr_X 27 FYLRGHLYESTGETGRS----SVRKVDLETGRILQRAEVPPPY-----FGAGIVAWRDRLIQLTWRNH----EGFVYDLA 93 (243)
T ss_dssp EEETTEEEEEECCTTSC----EEEEEETTTCCEEEEEECCTTC-----CEEEEEEETTEEEEEESSSS----EEEEEETT
T ss_pred EEECCEEEEECCCCCCc----eEEEEECCCCCEEEEEeCCCCc-----ceeEEEEeCCEEEEEEeeCC----EEEEEECC
Confidence 34567777766553222 899999998766 455777543 23456667899999976654 366777 5
Q ss_pred ceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCceeeeeEEE
Q 016891 283 CWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGAAADQVTI 345 (381)
Q Consensus 283 ~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~~~~~v~~ 345 (381)
.-.++.+++.. ....++..+++.+++. ....+|.++|++|.+.. +.|.+
T Consensus 94 tl~~~~ti~~~----~~Gwglt~dg~~L~vS---------dgs~~l~~iDp~t~~~~-~~I~V 142 (243)
T 3mbr_X 94 TLTPRARFRYP----GEGWALTSDDSHLYMS---------DGTAVIRKLDPDTLQQV-GSIKV 142 (243)
T ss_dssp TTEEEEEEECS----SCCCEEEECSSCEEEE---------CSSSEEEEECTTTCCEE-EEEEC
T ss_pred cCcEEEEEeCC----CCceEEeeCCCEEEEE---------CCCCeEEEEeCCCCeEE-EEEEE
Confidence 66677777621 1235566677757776 34567999999997762 55655
No 29
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=95.70 E-value=1.2 Score=40.47 Aligned_cols=182 Identities=12% Similarity=0.030 Sum_probs=98.0
Q ss_pred EEEEee-CCCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCCcEEE
Q 016891 111 LIAFKN-DENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTNSWRR 189 (381)
Q Consensus 111 Ll~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W~~ 189 (381)
.+++.. ....+.++|..+++....-.... ....+.+.+... + ++.... ....+.+++..++.-..
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~------~~~~~~~s~dg~-~-l~~~~~------~d~~i~v~d~~~~~~~~ 68 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVGS------NPMGAVISPDGT-K-VYVANA------HSNDVSIIDTATNNVIA 68 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSS------SEEEEEECTTSS-E-EEEEEG------GGTEEEEEETTTTEEEE
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecCC------CcceEEECCCCC-E-EEEECC------CCCeEEEEECCCCeEEE
Confidence 344443 45678999999887665322111 123444454332 2 222211 11568889988875443
Q ss_pred cccCCCcceecCCCcEEE--CCe-eEEEEeeCCCCCCcCEEEEEECCCCeeeee-cCCCCCCCCCceeEEEEEE-CCeEE
Q 016891 190 IRVDFPYYILHGWDGTFA--DGH-VHWLVTNNPEDYIENLIIAFNLKSEEFHEV-PLPHLENRNDVLVMFVGNF-SGCLY 264 (381)
Q Consensus 190 ~~~~~p~~~~~~~~~v~~--nG~-lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~~~L~~~-~G~L~ 264 (381)
.- ..+... .++.+ +|. +|..+..+ ..|..+|+.+.+.... ..... ...+... +|+..
T Consensus 69 ~~-~~~~~v----~~~~~spdg~~l~~~~~~~------~~v~v~d~~~~~~~~~~~~~~~-------~~~~~~s~dg~~l 130 (391)
T 1l0q_A 69 TV-PAGSSP----QGVAVSPDGKQVYVTNMAS------STLSVIDTTSNTVAGTVKTGKS-------PLGLALSPDGKKL 130 (391)
T ss_dssp EE-ECSSSE----EEEEECTTSSEEEEEETTT------TEEEEEETTTTEEEEEEECSSS-------EEEEEECTTSSEE
T ss_pred EE-ECCCCc----cceEECCCCCEEEEEECCC------CEEEEEECCCCeEEEEEeCCCC-------cceEEECCCCCEE
Confidence 22 111111 23333 355 44443332 2799999998765433 32211 2233333 56544
Q ss_pred -EEEecCCCceEEEEEEC-CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCce
Q 016891 265 -FSCLCNYPQPVDIWVLM-GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGA 338 (381)
Q Consensus 265 -~~~~~~~~~~~~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~ 338 (381)
+....++ .+.+|.++ .+........ .....+.+.++|+.|++.. .....+.+||+++++.
T Consensus 131 ~~~~~~~~--~v~~~d~~~~~~~~~~~~~----~~~~~~~~~~dg~~l~~~~--------~~~~~v~~~d~~~~~~ 192 (391)
T 1l0q_A 131 YVTNNGDK--TVSVINTVTKAVINTVSVG----RSPKGIAVTPDGTKVYVAN--------FDSMSISVIDTVTNSV 192 (391)
T ss_dssp EEEETTTT--EEEEEETTTTEEEEEEECC----SSEEEEEECTTSSEEEEEE--------TTTTEEEEEETTTTEE
T ss_pred EEEeCCCC--EEEEEECCCCcEEEEEecC----CCcceEEECCCCCEEEEEe--------CCCCEEEEEECCCCeE
Confidence 4443333 89999887 5444333322 2346677778888666663 3456799999999887
No 30
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=95.59 E-value=1.2 Score=39.83 Aligned_cols=199 Identities=14% Similarity=0.036 Sum_probs=101.7
Q ss_pred CcEEEEeeC-----CCcEEEEccCCcceee-CCC--CCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEE
Q 016891 109 NGLIAFKND-----ENGIALWNPSTEEHLI-LPK--FWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVY 180 (381)
Q Consensus 109 ~GLl~~~~~-----~~~~~V~NP~T~~~~~-LP~--~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vy 180 (381)
+|++.+... ...+.++||.|++... +.. ..... ......+.++ ++ ++..... ..-.+.++
T Consensus 2 ~g~~v~neg~~g~~~~~l~~~d~~t~~~~~~i~~~~n~~~l--g~~~~~i~~~---~~-~lyv~~~------~~~~v~vi 69 (328)
T 3dsm_A 2 SGLFITNEGNFQYSNATLSYYDPATCEVENEVFYRANGFKL--GDVAQSMVIR---DG-IGWIVVN------NSHVIFAI 69 (328)
T ss_dssp CEEEEEECCCTTSCCBEEEEEETTTTEEECSHHHHHHSSCC--BSCEEEEEEE---TT-EEEEEEG------GGTEEEEE
T ss_pred CeEEEEecCCCCCCCceEEEEECCCCEEhhhhHhhhcCccc--CccceEEEEE---CC-EEEEEEc------CCCEEEEE
Confidence 566666653 5679999999998764 110 00001 1111223333 22 2222221 11468889
Q ss_pred EcCCCcE-EEcccCCCcceecCCCcEE--ECCeeEEEEeeCCCCCCcCEEEEEECCCCeee-eecCCCCCCCCCceeEEE
Q 016891 181 SLRTNSW-RRIRVDFPYYILHGWDGTF--ADGHVHWLVTNNPEDYIENLIIAFNLKSEEFH-EVPLPHLENRNDVLVMFV 256 (381)
Q Consensus 181 ss~t~~W-~~~~~~~p~~~~~~~~~v~--~nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~-~i~~P~~~~~~~~~~~~L 256 (381)
+..++.- +.++ .... ..++. -+|.+|+....+. .|.++|+.+.+.. .++.+...... .....+
T Consensus 70 D~~t~~~~~~i~-~~~~-----p~~i~~~~~g~lyv~~~~~~------~v~~iD~~t~~~~~~i~~g~~~~~~-~~p~~i 136 (328)
T 3dsm_A 70 DINTFKEVGRIT-GFTS-----PRYIHFLSDEKAYVTQIWDY------RIFIINPKTYEITGYIECPDMDMES-GSTEQM 136 (328)
T ss_dssp ETTTCCEEEEEE-CCSS-----EEEEEEEETTEEEEEEBSCS------EEEEEETTTTEEEEEEECTTCCTTT-CBCCCE
T ss_pred ECcccEEEEEcC-CCCC-----CcEEEEeCCCeEEEEECCCC------eEEEEECCCCeEEEEEEcCCccccC-CCcceE
Confidence 9888764 2232 1110 02333 5789988773332 7999999988764 45554411000 011123
Q ss_pred EEECCeEEEEEecCCCceEEEEEEC-CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecc-cCCcc-ccCCcEEEEEeC
Q 016891 257 GNFSGCLYFSCLCNYPQPVDIWVLM-GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFE-YGEDE-DINRWELFWYDL 333 (381)
Q Consensus 257 ~~~~G~L~~~~~~~~~~~~~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~-~~~~~-~~~~~~l~~yd~ 333 (381)
+..+|+|++....... .+.++-++ .+..+...+.. ...-+.+.++|. +++..++ +.... ......|+.+|+
T Consensus 137 ~~~~~~lyv~~~~~~~-~v~viD~~t~~~~~~i~~g~----~p~~i~~~~dG~-l~v~~~~~~~~~~~~~~~~~v~~id~ 210 (328)
T 3dsm_A 137 VQYGKYVYVNCWSYQN-RILKIDTETDKVVDELTIGI----QPTSLVMDKYNK-MWTITDGGYEGSPYGYEAPSLYRIDA 210 (328)
T ss_dssp EEETTEEEEEECTTCC-EEEEEETTTTEEEEEEECSS----CBCCCEECTTSE-EEEEBCCBCTTCSSCBCCCEEEEEET
T ss_pred EEECCEEEEEcCCCCC-EEEEEECCCCeEEEEEEcCC----CccceEEcCCCC-EEEEECCCccCCccccCCceEEEEEC
Confidence 3368899888652222 56666555 44333333321 123345566776 7777311 00000 000257999999
Q ss_pred CCCce
Q 016891 334 QNQGA 338 (381)
Q Consensus 334 ~t~~~ 338 (381)
+++++
T Consensus 211 ~t~~v 215 (328)
T 3dsm_A 211 ETFTV 215 (328)
T ss_dssp TTTEE
T ss_pred CCCeE
Confidence 99988
No 31
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=95.02 E-value=0.36 Score=41.99 Aligned_cols=113 Identities=11% Similarity=0.023 Sum_probs=73.9
Q ss_pred EECCeeEEEEeeCCCCCCcCEEEEEECCCCee-eeecCCCCCCCCCceeEEEEEECCeEEEEEecCCCceEEEEEEC-Cc
Q 016891 206 FADGHVHWLVTNNPEDYIENLIIAFNLKSEEF-HEVPLPHLENRNDVLVMFVGNFSGCLYFSCLCNYPQPVDIWVLM-GC 283 (381)
Q Consensus 206 ~~nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~-~~i~~P~~~~~~~~~~~~L~~~~G~L~~~~~~~~~~~~~iW~l~-~~ 283 (381)
+.+|.||.-.+.... ..|..+|+.+.+- ..+++|... +..-+...+++|+++..... .+|+.+ ..
T Consensus 50 ~~~~~LyestG~~g~----S~v~~vD~~Tgkv~~~~~l~~~~-----FgeGit~~g~~ly~ltw~~~----~v~v~D~~t 116 (262)
T 3nol_A 50 YRNGYFYESTGLNGR----SSIRKVDIESGKTLQQIELGKRY-----FGEGISDWKDKIVGLTWKNG----LGFVWNIRN 116 (262)
T ss_dssp EETTEEEEEEEETTE----EEEEEECTTTCCEEEEEECCTTC-----CEEEEEEETTEEEEEESSSS----EEEEEETTT
T ss_pred EECCEEEEECCCCCC----ceEEEEECCCCcEEEEEecCCcc-----ceeEEEEeCCEEEEEEeeCC----EEEEEECcc
Confidence 457888887765422 2799999998765 445776533 23456667899999977654 366666 55
Q ss_pred eeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCceeeeeEEE
Q 016891 284 WTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGAAADQVTI 345 (381)
Q Consensus 284 W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~~~~~v~~ 345 (381)
-..+.+++.. ....++..+|+.+++. ....++..+|++|.+.. +.|.+
T Consensus 117 ~~~~~ti~~~----~eG~glt~dg~~L~~S---------dGs~~i~~iDp~T~~v~-~~I~V 164 (262)
T 3nol_A 117 LRQVRSFNYD----GEGWGLTHNDQYLIMS---------DGTPVLRFLDPESLTPV-RTITV 164 (262)
T ss_dssp CCEEEEEECS----SCCCCEEECSSCEEEC---------CSSSEEEEECTTTCSEE-EEEEC
T ss_pred CcEEEEEECC----CCceEEecCCCEEEEE---------CCCCeEEEEcCCCCeEE-EEEEe
Confidence 5666677621 1334555677756665 33567999999997762 55555
No 32
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=95.02 E-value=2 Score=38.91 Aligned_cols=190 Identities=12% Similarity=0.080 Sum_probs=101.1
Q ss_pred EEEEeeCCCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCCcEEEc
Q 016891 111 LIAFKNDENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTNSWRRI 190 (381)
Q Consensus 111 Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W~~~ 190 (381)
+|+....+..+.|||..+++....-.... + ......+.+.+..+.+ +.... ....+.+++.++...+..
T Consensus 88 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-h--~~~v~~~~~~~~~~~~--l~s~~------~d~~i~iwd~~~~~~~~~ 156 (383)
T 3ei3_B 88 TVAVGSKGGDIILWDYDVQNKTSFIQGMG-P--GDAITGMKFNQFNTNQ--LFVSS------IRGATTLRDFSGSVIQVF 156 (383)
T ss_dssp EEEEEEBTSCEEEEETTSTTCEEEECCCS-T--TCBEEEEEEETTEEEE--EEEEE------TTTEEEEEETTSCEEEEE
T ss_pred EEEEEcCCCeEEEEeCCCcccceeeecCC-c--CCceeEEEeCCCCCCE--EEEEe------CCCEEEEEECCCCceEEE
Confidence 44444456678999998877665433211 1 1234455555533322 22221 115678888887666655
Q ss_pred ccCCCcceecCCCcEE--ECCeeEEEEeeCCCCCCcCEEEEEECCCCeeeeecCCCCCCCCCceeEEEEEE-CCe-EEEE
Q 016891 191 RVDFPYYILHGWDGTF--ADGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEVPLPHLENRNDVLVMFVGNF-SGC-LYFS 266 (381)
Q Consensus 191 ~~~~p~~~~~~~~~v~--~nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~-~G~-L~~~ 266 (381)
. ......... ..+. -+|.+...+..+ ..|..+|+..+....+..... ....+.-. +|. +.+.
T Consensus 157 ~-~~~~~~~~v-~~~~~~~~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~h~~------~v~~~~~~~~~~~~l~s 222 (383)
T 3ei3_B 157 A-KTDSWDYWY-CCVDVSVSRQMLATGDST------GRLLLLGLDGHEIFKEKLHKA------KVTHAEFNPRCDWLMAT 222 (383)
T ss_dssp E-CCCCSSCCE-EEEEEETTTTEEEEEETT------SEEEEEETTSCEEEEEECSSS------CEEEEEECSSCTTEEEE
T ss_pred e-ccCCCCCCe-EEEEECCCCCEEEEECCC------CCEEEEECCCCEEEEeccCCC------cEEEEEECCCCCCEEEE
Confidence 4 211000000 1111 245544444333 279999997665555432221 12233333 455 6666
Q ss_pred EecCCCceEEEEEEC---CceeEEEEecCCCCCeeEEEEEEe-CCCEEEEEecccCCccccCCcEEEEEeCCCCce
Q 016891 267 CLCNYPQPVDIWVLM---GCWTKTFSFPRSVGDYVKALAYSK-SGGKVLVDKFEYGEDEDINRWELFWYDLQNQGA 338 (381)
Q Consensus 267 ~~~~~~~~~~iW~l~---~~W~~~~~i~~~~~~~~~~~~~~~-~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~ 338 (381)
+..++ .+.||.+. ..-..+..+. ......-+.+.+ +|..|+.. ..+..+.+||+++.+.
T Consensus 223 ~~~d~--~i~iwd~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~~l~~~---------~~d~~i~iwd~~~~~~ 285 (383)
T 3ei3_B 223 SSVDA--TVKLWDLRNIKDKNSYIAEMP--HEKPVNAAYFNPTDSTKLLTT---------DQRNEIRVYSSYDWSK 285 (383)
T ss_dssp EETTS--EEEEEEGGGCCSTTCEEEEEE--CSSCEEEEEECTTTSCEEEEE---------ESSSEEEEEETTBTTS
T ss_pred EeCCC--EEEEEeCCCCCcccceEEEec--CCCceEEEEEcCCCCCEEEEE---------cCCCcEEEEECCCCcc
Confidence 66555 89999988 1223333333 123456677778 88845444 4566899999998765
No 33
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=94.61 E-value=0.73 Score=40.26 Aligned_cols=112 Identities=6% Similarity=-0.039 Sum_probs=71.5
Q ss_pred CeeEEEEeeCCCCCCcCEEEEEECCCCee-eeecCCCCCCCCCceeEEEEEECCeEEEEEecCCCceEEEEEEC-CceeE
Q 016891 209 GHVHWLVTNNPEDYIENLIIAFNLKSEEF-HEVPLPHLENRNDVLVMFVGNFSGCLYFSCLCNYPQPVDIWVLM-GCWTK 286 (381)
Q Consensus 209 G~lYwl~~~~~~~~~~~~i~~fD~~~e~~-~~i~~P~~~~~~~~~~~~L~~~~G~L~~~~~~~~~~~~~iW~l~-~~W~~ 286 (381)
|.||...+.... ..|.++|+.+.+- ..+++|... +...++..+++|+++..... . +++.+ ..-..
T Consensus 32 g~Lyvstg~~~~----s~v~~iD~~tg~v~~~i~l~~~~-----fgeGi~~~g~~lyv~t~~~~--~--v~viD~~t~~v 98 (266)
T 2iwa_A 32 DTLFESTGLYGR----SSVRQVALQTGKVENIHKMDDSY-----FGEGLTLLNEKLYQVVWLKN--I--GFIYDRRTLSN 98 (266)
T ss_dssp TEEEEEECSTTT----CEEEEEETTTCCEEEEEECCTTC-----CEEEEEEETTEEEEEETTCS--E--EEEEETTTTEE
T ss_pred CeEEEECCCCCC----CEEEEEECCCCCEEEEEecCCCc-----ceEEEEEeCCEEEEEEecCC--E--EEEEECCCCcE
Confidence 688876653211 2899999998765 444665432 22345556789999987544 3 66666 56666
Q ss_pred EEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCceeeeeEEEe
Q 016891 287 TFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGAAADQVTIH 346 (381)
Q Consensus 287 ~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~~~~~v~~~ 346 (381)
+.+|+... ....++..+|+.+++. .....+.+.|++|.+.. +.|.+.
T Consensus 99 ~~~i~~g~---~~g~glt~Dg~~l~vs---------~gs~~l~viD~~t~~v~-~~I~Vg 145 (266)
T 2iwa_A 99 IKNFTHQM---KDGWGLATDGKILYGS---------DGTSILYEIDPHTFKLI-KKHNVK 145 (266)
T ss_dssp EEEEECCS---SSCCEEEECSSSEEEE---------CSSSEEEEECTTTCCEE-EEEECE
T ss_pred EEEEECCC---CCeEEEEECCCEEEEE---------CCCCeEEEEECCCCcEE-EEEEEC
Confidence 77776211 1235566788877777 34568999999997762 555543
No 34
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=93.96 E-value=2.9 Score=36.48 Aligned_cols=193 Identities=9% Similarity=0.046 Sum_probs=96.9
Q ss_pred CcEEEEeeCCCcEEEEccCCcceeeC-CCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCCcE
Q 016891 109 NGLIAFKNDENGIALWNPSTEEHLIL-PKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTNSW 187 (381)
Q Consensus 109 ~GLl~~~~~~~~~~V~NP~T~~~~~L-P~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W 187 (381)
+|-+++...+..+.|||..+++.... ...... ........+.+.+. +.+-+ ... ....+.+|+.+++..
T Consensus 62 ~~~~l~~~~dg~i~iw~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~-~~~l~--~~~------~d~~i~~~d~~~~~~ 131 (337)
T 1gxr_A 62 PTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCL-NRDNYIRSCKLLPD-GCTLI--VGG------EASTLSIWDLAAPTP 131 (337)
T ss_dssp SSSEEEEECBSEEEEEETTSTTCCSCSEEEECS-CTTSBEEEEEECTT-SSEEE--EEE------SSSEEEEEECCCC--
T ss_pred CCcEEEEcCCCeEEEEECCCCCceeeeeccccc-CCCCcEEEEEEcCC-CCEEE--EEc------CCCcEEEEECCCCCc
Confidence 44443333367788999877653221 111000 01123344555553 22222 211 115788999888775
Q ss_pred EEcccCCCcceecCC-CcEEE--CCeeEEEEeeCCCCCCcCEEEEEECCCCeeeee-cCCCCCCCCCceeEEEEEE-CCe
Q 016891 188 RRIRVDFPYYILHGW-DGTFA--DGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEV-PLPHLENRNDVLVMFVGNF-SGC 262 (381)
Q Consensus 188 ~~~~~~~p~~~~~~~-~~v~~--nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~~~L~~~-~G~ 262 (381)
.... .... .... ..+.+ +|.....+..+. .|..+|+.+.+.... ..... ....+... +|.
T Consensus 132 ~~~~-~~~~--~~~~i~~~~~~~~~~~l~~~~~dg------~v~~~d~~~~~~~~~~~~~~~------~i~~~~~~~~~~ 196 (337)
T 1gxr_A 132 RIKA-ELTS--SAPACYALAISPDSKVCFSCCSDG------NIAVWDLHNQTLVRQFQGHTD------GASCIDISNDGT 196 (337)
T ss_dssp EEEE-EEEC--SSSCEEEEEECTTSSEEEEEETTS------CEEEEETTTTEEEEEECCCSS------CEEEEEECTTSS
T ss_pred ceee-eccc--CCCceEEEEECCCCCEEEEEeCCC------cEEEEeCCCCceeeeeecccC------ceEEEEECCCCC
Confidence 4433 1110 0000 22222 455444444332 689999987654332 22111 12233333 566
Q ss_pred EEEEEecCCCceEEEEEEC-CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCceeee
Q 016891 263 LYFSCLCNYPQPVDIWVLM-GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGAAAD 341 (381)
Q Consensus 263 L~~~~~~~~~~~~~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~~~~ 341 (381)
+.++...++ .+.+|.++ .+-.. .+. ......-+.+.+++..++.. .....+.+||+++++. .
T Consensus 197 ~l~~~~~dg--~i~~~d~~~~~~~~--~~~--~~~~v~~~~~s~~~~~l~~~---------~~~~~i~~~~~~~~~~--~ 259 (337)
T 1gxr_A 197 KLWTGGLDN--TVRSWDLREGRQLQ--QHD--FTSQIFSLGYCPTGEWLAVG---------MESSNVEVLHVNKPDK--Y 259 (337)
T ss_dssp EEEEEETTS--EEEEEETTTTEEEE--EEE--CSSCEEEEEECTTSSEEEEE---------ETTSCEEEEETTSSCE--E
T ss_pred EEEEEecCC--cEEEEECCCCceEe--eec--CCCceEEEEECCCCCEEEEE---------cCCCcEEEEECCCCCe--E
Confidence 666666555 79999888 33222 222 11234556777788855555 3556799999998877 5
Q ss_pred eE
Q 016891 342 QV 343 (381)
Q Consensus 342 ~v 343 (381)
.+
T Consensus 260 ~~ 261 (337)
T 1gxr_A 260 QL 261 (337)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 35
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=93.69 E-value=0.66 Score=40.43 Aligned_cols=111 Identities=11% Similarity=-0.035 Sum_probs=71.6
Q ss_pred EECCeeEEEEeeCCCCCCcCEEEEEECCCCee-eeecCCCCCCCCCceeEEEEEECCeEEEEEecCCCceEEEEEEC-Cc
Q 016891 206 FADGHVHWLVTNNPEDYIENLIIAFNLKSEEF-HEVPLPHLENRNDVLVMFVGNFSGCLYFSCLCNYPQPVDIWVLM-GC 283 (381)
Q Consensus 206 ~~nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~-~~i~~P~~~~~~~~~~~~L~~~~G~L~~~~~~~~~~~~~iW~l~-~~ 283 (381)
+.++.||.-.+... .|..+|+.+.+- ..+ +|... +.--+...+++|+++...+. .+|+.+ ..
T Consensus 62 ~~~~~Ly~stG~~g------~v~~iD~~Tgkv~~~~-l~~~~-----FgeGit~~g~~Ly~ltw~~~----~v~V~D~~T 125 (268)
T 3nok_A 62 FHQGHFFESTGHQG------TLRQLSLESAQPVWME-RLGNI-----FAEGLASDGERLYQLTWTEG----LLFTWSGMP 125 (268)
T ss_dssp EETTEEEEEETTTT------EEEECCSSCSSCSEEE-ECTTC-----CEEEEEECSSCEEEEESSSC----EEEEEETTT
T ss_pred EECCEEEEEcCCCC------EEEEEECCCCcEEeEE-CCCCc-----ceeEEEEeCCEEEEEEccCC----EEEEEECCc
Confidence 34677777665542 599999998755 444 55432 23346667889999876554 366777 56
Q ss_pred eeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCceeeeeEEEe
Q 016891 284 WTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGAAADQVTIH 346 (381)
Q Consensus 284 W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~~~~~v~~~ 346 (381)
-..+.+|+... ...++..+|+.+++. ....++.++|++|.+.. +.|.+.
T Consensus 126 l~~~~ti~~~~----eGwGLt~Dg~~L~vS---------dGs~~l~~iDp~T~~v~-~~I~V~ 174 (268)
T 3nok_A 126 PQRERTTRYSG----EGWGLCYWNGKLVRS---------DGGTMLTFHEPDGFALV-GAVQVK 174 (268)
T ss_dssp TEEEEEEECSS----CCCCEEEETTEEEEE---------CSSSEEEEECTTTCCEE-EEEECE
T ss_pred CcEEEEEeCCC----ceeEEecCCCEEEEE---------CCCCEEEEEcCCCCeEE-EEEEeC
Confidence 66667776211 234555678856666 34668999999997772 556553
No 36
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=93.28 E-value=4.5 Score=36.45 Aligned_cols=187 Identities=12% Similarity=0.032 Sum_probs=98.5
Q ss_pred CcEEEEee-CCCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCCcE
Q 016891 109 NGLIAFKN-DENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTNSW 187 (381)
Q Consensus 109 ~GLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W 187 (381)
+..|++.. ....+.++|+.+++....-.... ....+.+.+.. .+-++.. . ....+.+|+.+++..
T Consensus 85 g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~------~~~~~~~s~dg-~~l~~~~-~------~~~~v~~~d~~~~~~ 150 (391)
T 1l0q_A 85 GKQVYVTNMASSTLSVIDTTSNTVAGTVKTGK------SPLGLALSPDG-KKLYVTN-N------GDKTVSVINTVTKAV 150 (391)
T ss_dssp SSEEEEEETTTTEEEEEETTTTEEEEEEECSS------SEEEEEECTTS-SEEEEEE-T------TTTEEEEEETTTTEE
T ss_pred CCEEEEEECCCCEEEEEECCCCeEEEEEeCCC------CcceEEECCCC-CEEEEEe-C------CCCEEEEEECCCCcE
Confidence 44454444 45789999999988765432211 12344455433 2221221 1 115788888888765
Q ss_pred EEcccCCCcceecCCCcEEE--CCeeEEEEeeCCCCCCcCEEEEEECCCCeeeee-cCCCCCCCCCceeEEEEEE-CCeE
Q 016891 188 RRIRVDFPYYILHGWDGTFA--DGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEV-PLPHLENRNDVLVMFVGNF-SGCL 263 (381)
Q Consensus 188 ~~~~~~~p~~~~~~~~~v~~--nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~~~L~~~-~G~L 263 (381)
...- ...... ..+.+ +|..-++..... ..|..+|+.+.+.... .... ....+... +|+.
T Consensus 151 ~~~~-~~~~~~----~~~~~~~dg~~l~~~~~~~-----~~v~~~d~~~~~~~~~~~~~~-------~~~~~~~~~~g~~ 213 (391)
T 1l0q_A 151 INTV-SVGRSP----KGIAVTPDGTKVYVANFDS-----MSISVIDTVTNSVIDTVKVEA-------APSGIAVNPEGTK 213 (391)
T ss_dssp EEEE-ECCSSE----EEEEECTTSSEEEEEETTT-----TEEEEEETTTTEEEEEEECSS-------EEEEEEECTTSSE
T ss_pred EEEE-ecCCCc----ceEEECCCCCEEEEEeCCC-----CEEEEEECCCCeEEEEEecCC-------CccceEECCCCCE
Confidence 4332 111111 22222 454333333222 2799999988765433 3211 12233333 5654
Q ss_pred EEEEec-CCCceEEEEEEC-CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCce
Q 016891 264 YFSCLC-NYPQPVDIWVLM-GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGA 338 (381)
Q Consensus 264 ~~~~~~-~~~~~~~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~ 338 (381)
.++... .....+.+|.++ .+ .+..++. +....-+.+.++|+.|++.. .....+.+||+++++.
T Consensus 214 l~~~~~~~~~~~v~~~d~~~~~--~~~~~~~--~~~~~~~~~s~dg~~l~~s~--------~~d~~v~v~d~~~~~~ 278 (391)
T 1l0q_A 214 AYVTNVDKYFNTVSMIDTGTNK--ITARIPV--GPDPAGIAVTPDGKKVYVAL--------SFXNTVSVIDTATNTI 278 (391)
T ss_dssp EEEEEECSSCCEEEEEETTTTE--EEEEEEC--CSSEEEEEECTTSSEEEEEE--------TTTTEEEEEETTTTEE
T ss_pred EEEEecCcCCCcEEEEECCCCe--EEEEEec--CCCccEEEEccCCCEEEEEc--------CCCCEEEEEECCCCcE
Confidence 444442 122278888887 32 3344441 12245567778888676663 3456799999999887
No 37
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=93.19 E-value=4 Score=35.62 Aligned_cols=199 Identities=9% Similarity=0.057 Sum_probs=99.9
Q ss_pred CcEEEEee-CCCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCCcE
Q 016891 109 NGLIAFKN-DENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTNSW 187 (381)
Q Consensus 109 ~GLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W 187 (381)
+|-|.+.+ ....++.+||.+++...+.... ...++.+++... -++.. . ..+.+|+.+++.+
T Consensus 24 ~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~-------~~~~i~~~~dG~--l~v~~-~--------~~l~~~d~~~g~~ 85 (297)
T 3g4e_A 24 SNSLLFVDIPAKKVCRWDSFTKQVQRVTMDA-------PVSSVALRQSGG--YVATI-G--------TKFCALNWKEQSA 85 (297)
T ss_dssp TTEEEEEETTTTEEEEEETTTCCEEEEECSS-------CEEEEEEBTTSS--EEEEE-T--------TEEEEEETTTTEE
T ss_pred CCEEEEEECCCCEEEEEECCCCcEEEEeCCC-------ceEEEEECCCCC--EEEEE-C--------CeEEEEECCCCcE
Confidence 44444444 5678899999998776543221 123455565433 22221 1 4678899999988
Q ss_pred EEcccCCCcceecCC-CcEEE--CCeeEEEEeeCCCC-----CCcCEEEEEECCCCeeeeecCCCCCCCCCceeEEEEEE
Q 016891 188 RRIRVDFPYYILHGW-DGTFA--DGHVHWLVTNNPED-----YIENLIIAFNLKSEEFHEVPLPHLENRNDVLVMFVGNF 259 (381)
Q Consensus 188 ~~~~~~~p~~~~~~~-~~v~~--nG~lYwl~~~~~~~-----~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~ 259 (381)
+.+. ..+....... +.+.+ +|.+|+-....... .....|..+|.... ...+.- ... ..+ .++..
T Consensus 86 ~~~~-~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~-~~~~~~--~~~---~pn-gi~~s 157 (297)
T 3g4e_A 86 VVLA-TVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHH-VKKYFD--QVD---ISN-GLDWS 157 (297)
T ss_dssp EEEE-ECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSC-EEEEEE--EES---BEE-EEEEC
T ss_pred EEEE-ecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCC-EEEEee--ccc---ccc-ceEEc
Confidence 8765 2221111111 33443 68876644322100 11236788887643 222210 000 011 23333
Q ss_pred -CC-eEEEEEecCCCceEEEEEEC---CceeE---EEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEE
Q 016891 260 -SG-CLYFSCLCNYPQPVDIWVLM---GCWTK---TFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWY 331 (381)
Q Consensus 260 -~G-~L~~~~~~~~~~~~~iW~l~---~~W~~---~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~y 331 (381)
+| .|+++..... .+.+|.++ ..... ...++... ....-+++..+|. |++.. .....|..|
T Consensus 158 pdg~~lyv~~~~~~--~i~~~~~d~~~G~~~~~~~~~~~~~~~-~~p~g~~~d~~G~-lwva~--------~~~~~v~~~ 225 (297)
T 3g4e_A 158 LDHKIFYYIDSLSY--SVDAFDYDLQTGQISNRRSVYKLEKEE-QIPDGMCIDAEGK-LWVAC--------YNGGRVIRL 225 (297)
T ss_dssp TTSCEEEEEEGGGT--EEEEEEECTTTCCEEEEEEEEECCGGG-CEEEEEEEBTTSC-EEEEE--------ETTTEEEEE
T ss_pred CCCCEEEEecCCCC--cEEEEeccCCCCcccCcEEEEECCCCC-CCCCeeEECCCCC-EEEEE--------cCCCEEEEE
Confidence 55 4666665444 56666663 23221 12222111 2234455566777 88873 345679999
Q ss_pred eCCCCceeeeeEEEe
Q 016891 332 DLQNQGAAADQVTIH 346 (381)
Q Consensus 332 d~~t~~~~~~~v~~~ 346 (381)
|++++++- +.+..+
T Consensus 226 d~~tG~~~-~~i~~p 239 (297)
T 3g4e_A 226 DPVTGKRL-QTVKLP 239 (297)
T ss_dssp CTTTCCEE-EEEECS
T ss_pred cCCCceEE-EEEECC
Confidence 99966651 555443
No 38
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=93.15 E-value=4.4 Score=36.02 Aligned_cols=190 Identities=11% Similarity=-0.014 Sum_probs=100.5
Q ss_pred cCcEEEEe-eCCCcEEEEccCCcce-eeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCC
Q 016891 108 CNGLIAFK-NDENGIALWNPSTEEH-LILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTN 185 (381)
Q Consensus 108 ~~GLl~~~-~~~~~~~V~NP~T~~~-~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~ 185 (381)
.++.+.+. .....+.|+|+.|++. ..++... . ..++.+++. + ++..... ....+.+++.+++
T Consensus 52 ~~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~-----~--p~~i~~~~~--g-~lyv~~~------~~~~v~~iD~~t~ 115 (328)
T 3dsm_A 52 RDGIGWIVVNNSHVIFAIDINTFKEVGRITGFT-----S--PRYIHFLSD--E-KAYVTQI------WDYRIFIINPKTY 115 (328)
T ss_dssp ETTEEEEEEGGGTEEEEEETTTCCEEEEEECCS-----S--EEEEEEEET--T-EEEEEEB------SCSEEEEEETTTT
T ss_pred ECCEEEEEEcCCCEEEEEECcccEEEEEcCCCC-----C--CcEEEEeCC--C-eEEEEEC------CCCeEEEEECCCC
Confidence 34555433 3456899999999887 4464221 1 123334332 3 4443321 0156888998887
Q ss_pred cEE-EcccCCCc-ceecCCCcEEECCeeEEEEee-CCCCCCcCEEEEEECCCCeee-eecCCCCCCCCCceeEEEEEECC
Q 016891 186 SWR-RIRVDFPY-YILHGWDGTFADGHVHWLVTN-NPEDYIENLIIAFNLKSEEFH-EVPLPHLENRNDVLVMFVGNFSG 261 (381)
Q Consensus 186 ~W~-~~~~~~p~-~~~~~~~~v~~nG~lYwl~~~-~~~~~~~~~i~~fD~~~e~~~-~i~~P~~~~~~~~~~~~L~~~~G 261 (381)
+-. .++..... .......-+.-+|.+|..... . ..|.++|+.+.+.. .++...... .+ ...-+|
T Consensus 116 ~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~~~------~~v~viD~~t~~~~~~i~~g~~p~-----~i-~~~~dG 183 (328)
T 3dsm_A 116 EITGYIECPDMDMESGSTEQMVQYGKYVYVNCWSYQ------NRILKIDTETDKVVDELTIGIQPT-----SL-VMDKYN 183 (328)
T ss_dssp EEEEEEECTTCCTTTCBCCCEEEETTEEEEEECTTC------CEEEEEETTTTEEEEEEECSSCBC-----CC-EECTTS
T ss_pred eEEEEEEcCCccccCCCcceEEEECCEEEEEcCCCC------CEEEEEECCCCeEEEEEEcCCCcc-----ce-EEcCCC
Confidence 533 22211000 000111223357788877542 2 27999999987653 334332211 11 122368
Q ss_pred eEEEEEecCC--------CceEEEEEEC-CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEe
Q 016891 262 CLYFSCLCNY--------PQPVDIWVLM-GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYD 332 (381)
Q Consensus 262 ~L~~~~~~~~--------~~~~~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd 332 (381)
+++++..... ...+.++-.+ .+-.+...++ .+....-+++.++++.+++. +. .++.+|
T Consensus 184 ~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~--~g~~p~~la~~~d~~~lyv~----------~~-~v~~~d 250 (328)
T 3dsm_A 184 KMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFK--LGDWPSEVQLNGTRDTLYWI----------NN-DIWRMP 250 (328)
T ss_dssp EEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECC--TTCCCEEEEECTTSCEEEEE----------SS-SEEEEE
T ss_pred CEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecC--CCCCceeEEEecCCCEEEEE----------cc-EEEEEE
Confidence 8888776431 1244444443 4433333332 22345667777778867776 33 699999
Q ss_pred CCCCce
Q 016891 333 LQNQGA 338 (381)
Q Consensus 333 ~~t~~~ 338 (381)
++++++
T Consensus 251 ~~t~~~ 256 (328)
T 3dsm_A 251 VEADRV 256 (328)
T ss_dssp TTCSSC
T ss_pred CCCCce
Confidence 999887
No 39
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=93.14 E-value=4.4 Score=35.94 Aligned_cols=142 Identities=8% Similarity=0.027 Sum_probs=78.6
Q ss_pred eEEEEEEcCCCcEEEcccCCCcceecCCCcEEE--CCeeEEEEeeCCCCCCcCEEEEEECCCCeeeeecC-CCCCCCCCc
Q 016891 175 TEIAVYSLRTNSWRRIRVDFPYYILHGWDGTFA--DGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEVPL-PHLENRNDV 251 (381)
Q Consensus 175 ~~~~vyss~t~~W~~~~~~~p~~~~~~~~~v~~--nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~~-P~~~~~~~~ 251 (381)
..+..++.+++.++.+. ..... .....+.+ +|.+|.....+.. ..|..||+.+.+.+.+.. +....
T Consensus 18 i~v~~~d~~tg~~~~~~-~~~~~--~~p~~~a~spdg~l~~~~~~~~~----~~v~~~~~~~g~~~~~~~~~~~~~---- 86 (347)
T 3hfq_A 18 IYQGTLDTTAKTLTNDG-LLAAT--QNPTYLALSAKDCLYSVDKEDDE----GGIAAWQIDGQTAHKLNTVVAPGT---- 86 (347)
T ss_dssp EEEEEEETTTTEEEEEE-EEEEC--SCCCCEEECTTCEEEEEEEETTE----EEEEEEEEETTEEEEEEEEEEESC----
T ss_pred EEEEEEcCCCCeEEEee-eeecc--CCcceEEEccCCeEEEEEecCCC----ceEEEEEecCCcEEEeeeeecCCC----
Confidence 44555566677776644 11100 00022332 6888887764211 278999998877766522 21111
Q ss_pred eeEEEEEE-CCe-EEEEEecCCCceEEEEEEC--CceeEEEEecC---CC-----CCeeEEEEEEeCCCEEEEEecccCC
Q 016891 252 LVMFVGNF-SGC-LYFSCLCNYPQPVDIWVLM--GCWTKTFSFPR---SV-----GDYVKALAYSKSGGKVLVDKFEYGE 319 (381)
Q Consensus 252 ~~~~L~~~-~G~-L~~~~~~~~~~~~~iW~l~--~~W~~~~~i~~---~~-----~~~~~~~~~~~~g~~i~l~~~~~~~ 319 (381)
....++.. +|+ |+++....+ .+.+|.++ .....+..+.. .+ .....-+++.++|+ +++..
T Consensus 87 ~p~~~a~spdg~~l~~~~~~~~--~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~----- 158 (347)
T 3hfq_A 87 PPAYVAVDEARQLVYSANYHKG--TAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVID----- 158 (347)
T ss_dssp CCSEEEEETTTTEEEEEETTTT--EEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEE-----
T ss_pred CCEEEEECCCCCEEEEEeCCCC--EEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEe-----
Confidence 11234444 676 444443333 89999997 45555554431 11 12344577788888 77763
Q ss_pred ccccCCcEEEEEeCC-CCce
Q 016891 320 DEDINRWELFWYDLQ-NQGA 338 (381)
Q Consensus 320 ~~~~~~~~l~~yd~~-t~~~ 338 (381)
.....+.+||++ ++++
T Consensus 159 ---~~~~~v~~~~~~~~g~~ 175 (347)
T 3hfq_A 159 ---LGSDKVYVYNVSDAGQL 175 (347)
T ss_dssp ---TTTTEEEEEEECTTSCE
T ss_pred ---CCCCEEEEEEECCCCcE
Confidence 345679999998 6666
No 40
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=93.05 E-value=2 Score=38.56 Aligned_cols=105 Identities=14% Similarity=0.031 Sum_probs=60.8
Q ss_pred EEEEEECCCCeeeee-cCCCCCCCCCceeEEEEEE-CCeEEEEEecCCCceEEEEEEC---CceeEEEEecCCCCCeeEE
Q 016891 226 LIIAFNLKSEEFHEV-PLPHLENRNDVLVMFVGNF-SGCLYFSCLCNYPQPVDIWVLM---GCWTKTFSFPRSVGDYVKA 300 (381)
Q Consensus 226 ~i~~fD~~~e~~~~i-~~P~~~~~~~~~~~~L~~~-~G~L~~~~~~~~~~~~~iW~l~---~~W~~~~~i~~~~~~~~~~ 300 (381)
.|..||+.+.++..+ ..+...... .....+... +|+..++........+.||.++ ..+..+..++. +....-
T Consensus 234 ~v~v~~~~~g~~~~~~~~~~~~~~~-~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~--g~~~~~ 310 (361)
T 3scy_A 234 TVIAFRYADGMLDEIQTVAADTVNA-QGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT--GIHPRN 310 (361)
T ss_dssp EEEEEEEETTEEEEEEEEESCSSCC-CCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC--SSCCCE
T ss_pred eEEEEEecCCceEEeEEEecCCCCC-CCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC--CCCCce
Confidence 788999887766544 221111100 112234333 6765444444312289999996 56666666653 333456
Q ss_pred EEEEeCCCEEEEEecccCCccccCCcEEEE--EeCCCCceeeeeE
Q 016891 301 LAYSKSGGKVLVDKFEYGEDEDINRWELFW--YDLQNQGAAADQV 343 (381)
Q Consensus 301 ~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~--yd~~t~~~~~~~v 343 (381)
+++.++|+.|++.. .....+.+ +|++++++ +.+
T Consensus 311 ~~~spdg~~l~~~~--------~~~~~v~v~~~d~~~g~~--~~~ 345 (361)
T 3scy_A 311 FIITPNGKYLLVAC--------RDTNVIQIFERDQATGLL--TDI 345 (361)
T ss_dssp EEECTTSCEEEEEE--------TTTTEEEEEEECTTTCCE--EEC
T ss_pred EEECCCCCEEEEEE--------CCCCCEEEEEEECCCCcE--eec
Confidence 77888998676663 23344444 78888888 766
No 41
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=92.63 E-value=5.9 Score=36.09 Aligned_cols=195 Identities=13% Similarity=0.065 Sum_probs=101.9
Q ss_pred EcccCcEEEEeeCCCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCC
Q 016891 105 IDSCNGLIAFKNDENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRT 184 (381)
Q Consensus 105 ~~s~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t 184 (381)
++.+++.++.......+.|||..+++...+-... + ......+.+.+. +.+-+ ... . ...+.+|+..+
T Consensus 99 ~~~s~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~--~--~~~v~~v~~s~~-~~~l~--~~~--~----dg~i~iwd~~~ 165 (401)
T 4aez_A 99 LDWSNLNVVAVALERNVYVWNADSGSVSALAETD--E--STYVASVKWSHD-GSFLS--VGL--G----NGLVDIYDVES 165 (401)
T ss_dssp EEECTTSEEEEEETTEEEEEETTTCCEEEEEECC--T--TCCEEEEEECTT-SSEEE--EEE--T----TSCEEEEETTT
T ss_pred EeecCCCEEEEECCCeEEEeeCCCCcEeEeeecC--C--CCCEEEEEECCC-CCEEE--EEC--C----CCeEEEEECcC
Confidence 3333343444445678999999999877654332 1 122344555552 33322 221 1 14678888877
Q ss_pred CcEEEcccCCCcceecCCCcEEECCeeEEEEeeCCCCCCcCEEEEEECCCCe--eeeecCCCCCCCCCceeEEEEEE-CC
Q 016891 185 NSWRRIRVDFPYYILHGWDGTFADGHVHWLVTNNPEDYIENLIIAFNLKSEE--FHEVPLPHLENRNDVLVMFVGNF-SG 261 (381)
Q Consensus 185 ~~W~~~~~~~p~~~~~~~~~v~~nG~lYwl~~~~~~~~~~~~i~~fD~~~e~--~~~i~~P~~~~~~~~~~~~L~~~-~G 261 (381)
+.-...-....... ..+.++|.+...+..+. .|..+|+.+.. ...+.... .....+.-. +|
T Consensus 166 ~~~~~~~~~~~~~v----~~~~~~~~~l~~~~~dg------~i~i~d~~~~~~~~~~~~~~~------~~v~~~~~~~~~ 229 (401)
T 4aez_A 166 QTKLRTMAGHQARV----GCLSWNRHVLSSGSRSG------AIHHHDVRIANHQIGTLQGHS------SEVCGLAWRSDG 229 (401)
T ss_dssp CCEEEEECCCSSCE----EEEEEETTEEEEEETTS------EEEEEETTSSSCEEEEEECCS------SCEEEEEECTTS
T ss_pred CeEEEEecCCCCce----EEEEECCCEEEEEcCCC------CEEEEecccCcceeeEEcCCC------CCeeEEEEcCCC
Confidence 65332210111111 44555776555554442 79999998432 22222111 112233333 57
Q ss_pred eEEEEEecCCCceEEEEEECCceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCce
Q 016891 262 CLYFSCLCNYPQPVDIWVLMGCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGA 338 (381)
Q Consensus 262 ~L~~~~~~~~~~~~~iW~l~~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~ 338 (381)
.+.+....++ .+.||.++.. .....+.. .......+.+.+++..+++... | .....+.+||+++++.
T Consensus 230 ~~l~s~~~d~--~v~iwd~~~~-~~~~~~~~-~~~~v~~~~~~p~~~~ll~~~~--g----s~d~~i~i~d~~~~~~ 296 (401)
T 4aez_A 230 LQLASGGNDN--VVQIWDARSS-IPKFTKTN-HNAAVKAVAWCPWQSNLLATGG--G----TMDKQIHFWNAATGAR 296 (401)
T ss_dssp SEEEEEETTS--CEEEEETTCS-SEEEEECC-CSSCCCEEEECTTSTTEEEEEC--C----TTTCEEEEEETTTCCE
T ss_pred CEEEEEeCCC--eEEEccCCCC-CccEEecC-CcceEEEEEECCCCCCEEEEec--C----CCCCEEEEEECCCCCE
Confidence 7666666655 7999988821 12223321 1123455667776654666520 0 1356799999988776
No 42
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=92.40 E-value=1.6 Score=40.67 Aligned_cols=194 Identities=16% Similarity=0.157 Sum_probs=93.9
Q ss_pred Cc-EEEEeeCCCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCCcE
Q 016891 109 NG-LIAFKNDENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTNSW 187 (381)
Q Consensus 109 ~G-Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W 187 (381)
++ +|.....+..+.|||..+++...+-.... + ......+.+.|..+.+-+ ... .+ ..+.+++.+++.-
T Consensus 131 ~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~g-H--~~~V~~l~f~p~~~~~l~-s~s---~D----~~v~iwd~~~~~~ 199 (435)
T 4e54_B 131 HPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIG-A--GGSITGLKFNPLNTNQFY-ASS---ME----GTTRLQDFKGNIL 199 (435)
T ss_dssp CTTCEEEEETTSCEEEECSSCCSCCEEECCCS-S--SCCCCEEEECSSCTTEEE-EEC---SS----SCEEEEETTSCEE
T ss_pred CCCEEEEEeCCCEEEEEECCCCCceeEEEccC-C--CCCEEEEEEeCCCCCEEE-EEe---CC----CEEEEeeccCCce
Confidence 44 44444466789999998887544322211 1 122345566665454322 111 11 4577788877765
Q ss_pred EEcccCCCcceecCCCcEE--ECCeeEEEEeeCCCCCCcCEEEEEECCCCeeeeecCCCCCCCCCceeEEEEEE-CCe-E
Q 016891 188 RRIRVDFPYYILHGWDGTF--ADGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEVPLPHLENRNDVLVMFVGNF-SGC-L 263 (381)
Q Consensus 188 ~~~~~~~p~~~~~~~~~v~--~nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~-~G~-L 263 (381)
+.+.......... .++. -+|.+...+..+. .|..+|+.++....+.. +......+.-. +|. +
T Consensus 200 ~~~~~~~~~~~~~--~~~~~~~~~~~l~~g~~dg------~i~~wd~~~~~~~~~~~------h~~~v~~v~~~p~~~~~ 265 (435)
T 4e54_B 200 RVFASSDTINIWF--CSLDVSASSRMVVTGDNVG------NVILLNMDGKELWNLRM------HKKKVTHVALNPCCDWF 265 (435)
T ss_dssp EEEECCSSCSCCC--CCEEEETTTTEEEEECSSS------BEEEEESSSCBCCCSBC------CSSCEEEEEECTTCSSE
T ss_pred eEEeccCCCCccE--EEEEECCCCCEEEEEeCCC------cEeeeccCcceeEEEec------ccceEEeeeecCCCceE
Confidence 5443111100000 2222 2455444443332 68889987654332221 11112223322 444 4
Q ss_pred EEEEecCCCceEEEEEEC-CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCce
Q 016891 264 YFSCLCNYPQPVDIWVLM-GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGA 338 (381)
Q Consensus 264 ~~~~~~~~~~~~~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~ 338 (381)
.+.+..++ .+.||.+. ..-.........-.....-+++.++|..|+.. ..+..|.+||+++...
T Consensus 266 ~~s~s~d~--~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~---------~~D~~i~iwd~~~~~~ 330 (435)
T 4e54_B 266 LATASVDQ--TVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTT---------DQKSEIRVYSASQWDC 330 (435)
T ss_dssp EEEEETTS--BCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEE---------ESSSCEEEEESSSSSS
T ss_pred EEEecCcc--eeeEEecccccccceEEEeeeccccccceeECCCCCeeEEE---------cCCCEEEEEECCCCcc
Confidence 44455444 78899887 22111000000011234445566788844444 3456699999988665
No 43
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=92.40 E-value=2.8 Score=36.77 Aligned_cols=138 Identities=7% Similarity=-0.062 Sum_probs=70.5
Q ss_pred eEEEEEEcC--CCcEEEcccCCCcceecCCCcEEE--CCe-eEEEEeeCCCCCCcCEEEEEECCCC-eeeee---cCCCC
Q 016891 175 TEIAVYSLR--TNSWRRIRVDFPYYILHGWDGTFA--DGH-VHWLVTNNPEDYIENLIIAFNLKSE-EFHEV---PLPHL 245 (381)
Q Consensus 175 ~~~~vyss~--t~~W~~~~~~~p~~~~~~~~~v~~--nG~-lYwl~~~~~~~~~~~~i~~fD~~~e-~~~~i---~~P~~ 245 (381)
..+.+|+.. ++.++.+. ..+... .-..+.+ +|. +|.....+ ..|..+|+.+. ....+ +....
T Consensus 60 ~~v~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~s~dg~~l~~~~~~~------~~i~~~d~~~~~~~~~~~~~~~~~~ 130 (343)
T 1ri6_A 60 FRVLAYRIAPDDGALTFAA-ESALPG--SLTHISTDHQGQFVFVGSYNA------GNVSVTRLEDGLPVGVVDVVEGLDG 130 (343)
T ss_dssp TEEEEEEECTTTCCEEEEE-EEECSS--CCSEEEECTTSSEEEEEETTT------TEEEEEEEETTEEEEEEEEECCCTT
T ss_pred CeEEEEEecCCCCceeecc-ccccCC--CCcEEEEcCCCCEEEEEecCC------CeEEEEECCCCccccccccccCCCC
Confidence 467777776 77887665 222111 1133333 455 44444322 16888888322 22222 22211
Q ss_pred CCCCCceeEEEEE-ECCeEEEEEe-cCCCceEEEEEEC--CceeEEE--EecCCCCCeeEEEEEEeCCCEEEEEecccCC
Q 016891 246 ENRNDVLVMFVGN-FSGCLYFSCL-CNYPQPVDIWVLM--GCWTKTF--SFPRSVGDYVKALAYSKSGGKVLVDKFEYGE 319 (381)
Q Consensus 246 ~~~~~~~~~~L~~-~~G~L~~~~~-~~~~~~~~iW~l~--~~W~~~~--~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~ 319 (381)
. ..+.. -+|+..++.. .++ .+.+|.++ ....... .+....+....-+.+.++|+.+++..
T Consensus 131 ~-------~~~~~s~dg~~l~~~~~~~~--~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~----- 196 (343)
T 1ri6_A 131 C-------HSANISPDNRTLWVPALKQD--RICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVN----- 196 (343)
T ss_dssp B-------CCCEECTTSSEEEEEEGGGT--EEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEE-----
T ss_pred c-------eEEEECCCCCEEEEecCCCC--EEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEe-----
Confidence 1 11222 2565334433 333 78999988 4454433 33211223345577788888666663
Q ss_pred ccccCCcEEEEEeCC--CCce
Q 016891 320 DEDINRWELFWYDLQ--NQGA 338 (381)
Q Consensus 320 ~~~~~~~~l~~yd~~--t~~~ 338 (381)
.....+.+||++ ++++
T Consensus 197 ---~~~~~i~~~~~~~~~g~~ 214 (343)
T 1ri6_A 197 ---ELNSSVDVWELKDPHGNI 214 (343)
T ss_dssp ---TTTTEEEEEESSCTTSCC
T ss_pred ---CCCCEEEEEEecCCCCcE
Confidence 345679999994 4555
No 44
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=92.35 E-value=6.5 Score=35.94 Aligned_cols=201 Identities=14% Similarity=0.087 Sum_probs=98.8
Q ss_pred ccCcEEEEee-CCCcEEEEccCCcceee-CCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCC
Q 016891 107 SCNGLIAFKN-DENGIALWNPSTEEHLI-LPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRT 184 (381)
Q Consensus 107 s~~GLl~~~~-~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t 184 (381)
+.+|-+++.. ....+.++|+.+++... ++... .....+.+++... + ++.... ....+.+|+.++
T Consensus 178 ~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~------~~~~~~~~~~~~~-~-l~~~~~------~~~~i~~~d~~~ 243 (433)
T 3bws_A 178 PEHNELWVSQMQANAVHVFDLKTLAYKATVDLTG------KWSKILLYDPIRD-L-VYCSNW------ISEDISVIDRKT 243 (433)
T ss_dssp GGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSS------SSEEEEEEETTTT-E-EEEEET------TTTEEEEEETTT
T ss_pred cCCCEEEEEECCCCEEEEEECCCceEEEEEcCCC------CCeeEEEEcCCCC-E-EEEEec------CCCcEEEEECCC
Confidence 3456555544 45778999988866543 22111 1233455555433 2 222211 114688899888
Q ss_pred CcEEEcccCCCcceecCCCcEEE--CCeeEEEEeeCCCC-C-CcCEEEEEECCCCeeeee-cCCCCCCCCCceeEEEEEE
Q 016891 185 NSWRRIRVDFPYYILHGWDGTFA--DGHVHWLVTNNPED-Y-IENLIIAFNLKSEEFHEV-PLPHLENRNDVLVMFVGNF 259 (381)
Q Consensus 185 ~~W~~~~~~~p~~~~~~~~~v~~--nG~lYwl~~~~~~~-~-~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~~~L~~~ 259 (381)
+.....- ...... .++.+ +|...+.+...... . ....|..+|+.+.+.... ..+.. ...+...
T Consensus 244 ~~~~~~~-~~~~~~----~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~-------~~~~~~~ 311 (433)
T 3bws_A 244 KLEIRKT-DKIGLP----RGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGN-------KRHIVSG 311 (433)
T ss_dssp TEEEEEC-CCCSEE----EEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEEC-------EEEEEEC
T ss_pred CcEEEEe-cCCCCc----eEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCC-------cceEEEC
Confidence 7554322 111111 23333 46444444321100 0 112788999987755333 21111 1123222
Q ss_pred -CC-eEEEEEecCCCceEEEEEECCceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCc------cccCCcEEEEE
Q 016891 260 -SG-CLYFSCLCNYPQPVDIWVLMGCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGED------EDINRWELFWY 331 (381)
Q Consensus 260 -~G-~L~~~~~~~~~~~~~iW~l~~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~------~~~~~~~l~~y 331 (381)
+| .|++....++ .+.+|.++ ....+..++ .+....-+++.++|..|++....-... .-.....+++|
T Consensus 312 ~~g~~l~~~~~~~~--~v~v~d~~-~~~~~~~~~--~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~ 386 (433)
T 3bws_A 312 NTENKIYVSDMCCS--KIEVYDLK-EKKVQKSIP--VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVI 386 (433)
T ss_dssp SSTTEEEEEETTTT--EEEEEETT-TTEEEEEEE--CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEE
T ss_pred CCCCEEEEEecCCC--EEEEEECC-CCcEEEEec--CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEE
Confidence 45 4555554444 88999887 122333343 123355677788888666662100000 00002379999
Q ss_pred eCCCCce
Q 016891 332 DLQNQGA 338 (381)
Q Consensus 332 d~~t~~~ 338 (381)
|+++++.
T Consensus 387 d~~~~~~ 393 (433)
T 3bws_A 387 DTTTDTV 393 (433)
T ss_dssp ETTTTEE
T ss_pred ECCCCcE
Confidence 9999887
No 45
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=92.24 E-value=8.3 Score=38.81 Aligned_cols=185 Identities=10% Similarity=0.132 Sum_probs=93.6
Q ss_pred CCCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCC-CCEEEEEEEEEeecCccceEEEEEEcCCCcEEEcccCCC
Q 016891 117 DENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVN-DDYKVVRLVQLVIGNVGYTEIAVYSLRTNSWRRIRVDFP 195 (381)
Q Consensus 117 ~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~-~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W~~~~~~~p 195 (381)
.+..+.|||..++....+..... + ......+.+.+.. +.+ ++... . ...+.+|+..++.|..+. ...
T Consensus 29 ~dg~I~vwd~~~~~~~~~~~l~~-h--~~~V~~l~~s~~~~~~~-l~s~s---~----Dg~I~vwd~~~~~~~~~~-~~~ 96 (753)
T 3jro_A 29 SDKTIKIFEVEGETHKLIDTLTG-H--EGPVWRVDWAHPKFGTI-LASCS---Y----DGKVLIWKEENGRWSQIA-VHA 96 (753)
T ss_dssp TTTEEEEEEEETTEEEEEEEECC-C--SSCEEEEEECCTTSCSE-EEEEE---T----TSCEEEEEEETTEEEEEE-EEC
T ss_pred CCCcEEEEecCCCCCccceeccC-C--cCceEEEEecCCCCCCE-EEEEe---C----CCeEEEEECCCCcccccc-ccc
Confidence 44556777776444333322211 1 1234455555543 333 22221 1 146888888888877665 211
Q ss_pred cceecCC-CcEEEC----CeeEEEEeeCCCCCCcCEEEEEECCCCeee-eecCCCCCCCCCceeEEEEEE----------
Q 016891 196 YYILHGW-DGTFAD----GHVHWLVTNNPEDYIENLIIAFNLKSEEFH-EVPLPHLENRNDVLVMFVGNF---------- 259 (381)
Q Consensus 196 ~~~~~~~-~~v~~n----G~lYwl~~~~~~~~~~~~i~~fD~~~e~~~-~i~~P~~~~~~~~~~~~L~~~---------- 259 (381)
. .... ..+.+. |.+...+..+. .|..+|+.+..-. ........ .....+.-.
T Consensus 97 ~--h~~~V~~v~~sp~~~~~~l~sgs~dg------~I~vwdl~~~~~~~~~~~~~~~----~~v~~l~~~p~~~~~~~~~ 164 (753)
T 3jro_A 97 V--HSASVNSVQWAPHEYGPLLLVASSDG------KVSVVEFKENGTTSPIIIDAHA----IGVNSASWAPATIEEDGEH 164 (753)
T ss_dssp C--CSSCEEEEEECCGGGCSEEEEEETTS------EEEEEECCSSSCCCCEEEECCS----SCEEEEEECCCC-------
T ss_pred C--CCCCeEEEEECCCCCCCEEEEEeCCC------cEEEEEeecCCCcceeEeecCC----CceEEEEecCccccccccc
Confidence 1 0011 333332 44444444332 7889998765211 11111000 011122222
Q ss_pred ----CCeEEEEEecCCCceEEEEEEC---CceeEEEEecCCCCCeeEEEEEEeC---CCEEEEEecccCCccccCCcEEE
Q 016891 260 ----SGCLYFSCLCNYPQPVDIWVLM---GCWTKTFSFPRSVGDYVKALAYSKS---GGKVLVDKFEYGEDEDINRWELF 329 (381)
Q Consensus 260 ----~G~L~~~~~~~~~~~~~iW~l~---~~W~~~~~i~~~~~~~~~~~~~~~~---g~~i~l~~~~~~~~~~~~~~~l~ 329 (381)
+|.+.+++..++ .+.+|.+. ..+.....+.... ....-+.+.++ +. +++.+ ..+..+.
T Consensus 165 ~~~~d~~~l~sgs~dg--~I~iwd~~~~~~~~~~~~~~~~h~-~~V~~l~~sp~~~~~~-~l~s~--------s~Dg~I~ 232 (753)
T 3jro_A 165 NGTKESRKFVTGGADN--LVKIWKYNSDAQTYVLESTLEGHS-DWVRDVAWSPTVLLRS-YLASV--------SQDRTCI 232 (753)
T ss_dssp --CGGGCCEEEEETTS--CEEEEEEETTTTEEEEEEEECCCS-SCEEEEEECCCCSSSE-EEEEE--------ESSSCEE
T ss_pred ccCCCCCEEEEEECCC--eEEEEeccCCcccceeeeeecCCC-CcEEEEEeccCCCCCC-EEEEE--------ecCCEEE
Confidence 356666666655 79999988 4566666555211 33556677777 66 55552 3456799
Q ss_pred EEeCCCCc
Q 016891 330 WYDLQNQG 337 (381)
Q Consensus 330 ~yd~~t~~ 337 (381)
+||+++++
T Consensus 233 iwd~~~~~ 240 (753)
T 3jro_A 233 IWTQDNEQ 240 (753)
T ss_dssp EEEESSSS
T ss_pred EecCCCCC
Confidence 99998864
No 46
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=92.10 E-value=5.1 Score=34.18 Aligned_cols=192 Identities=11% Similarity=0.034 Sum_probs=97.9
Q ss_pred EcccCcEEEEee-CCCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcC
Q 016891 105 IDSCNGLIAFKN-DENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLR 183 (381)
Q Consensus 105 ~~s~~GLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~ 183 (381)
++..+|.|.+.+ ....+.++++.++....+-.... ....++.+|+..+. +.... . ....+.+++..
T Consensus 43 ~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~-----~~p~~ia~d~~~~~--lyv~d----~--~~~~I~~~~~~ 109 (267)
T 1npe_A 43 FDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDL-----GSPEGIALDHLGRT--IFWTD----S--QLDRIEVAKMD 109 (267)
T ss_dssp EETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTC-----CCEEEEEEETTTTE--EEEEE----T--TTTEEEEEETT
T ss_pred EecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCC-----CCccEEEEEecCCe--EEEEE----C--CCCEEEEEEcC
Confidence 344567776665 45678888887765433321111 12335666765442 22221 0 12456777776
Q ss_pred CCcEEEcccCCCcceecCCCcEEE---CCeeEEEEeeCCCCCCcCEEEEEECCCCeeeee-cCCCCCCCCCceeEEEEEE
Q 016891 184 TNSWRRIRVDFPYYILHGWDGTFA---DGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEV-PLPHLENRNDVLVMFVGNF 259 (381)
Q Consensus 184 t~~W~~~~~~~p~~~~~~~~~v~~---nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~~~L~~~ 259 (381)
...-+.+. ... .... .++.+ +|.+||....... ..|..+++.....+.+ ..+.. ....++..
T Consensus 110 g~~~~~~~-~~~--~~~P-~~i~vd~~~g~lyv~~~~~~~----~~I~~~~~dg~~~~~~~~~~~~------~P~gia~d 175 (267)
T 1npe_A 110 GTQRRVLF-DTG--LVNP-RGIVTDPVRGNLYWTDWNRDN----PKIETSHMDGTNRRILAQDNLG------LPNGLTFD 175 (267)
T ss_dssp SCSCEEEE-CSS--CSSE-EEEEEETTTTEEEEEECCSSS----CEEEEEETTSCCCEEEECTTCS------CEEEEEEE
T ss_pred CCCEEEEE-ECC--CCCc-cEEEEeeCCCEEEEEECCCCC----cEEEEEecCCCCcEEEEECCCC------CCcEEEEc
Confidence 54323222 111 1011 44444 6899998754211 2788899876544433 21111 12233333
Q ss_pred --CCeEEEEEecCCCceEEEEEECCceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCc
Q 016891 260 --SGCLYFSCLCNYPQPVDIWVLMGCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQG 337 (381)
Q Consensus 260 --~G~L~~~~~~~~~~~~~iW~l~~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~ 337 (381)
++.|+++..... .+.+..++.. .....++. ...|.++..+++.|++.. .....|..+|+++++
T Consensus 176 ~~~~~lyv~d~~~~--~I~~~~~~g~-~~~~~~~~----~~~P~gi~~d~~~lyva~--------~~~~~v~~~d~~~g~ 240 (267)
T 1npe_A 176 AFSSQLCWVDAGTH--RAECLNPAQP-GRRKVLEG----LQYPFAVTSYGKNLYYTD--------WKTNSVIAMDLAISK 240 (267)
T ss_dssp TTTTEEEEEETTTT--EEEEEETTEE-EEEEEEEC----CCSEEEEEEETTEEEEEE--------TTTTEEEEEETTTTE
T ss_pred CCCCEEEEEECCCC--EEEEEecCCC-ceEEEecC----CCCceEEEEeCCEEEEEE--------CCCCeEEEEeCCCCC
Confidence 468888876544 4444333321 11111221 123455555566688873 345689999999877
Q ss_pred e
Q 016891 338 A 338 (381)
Q Consensus 338 ~ 338 (381)
.
T Consensus 241 ~ 241 (267)
T 1npe_A 241 E 241 (267)
T ss_dssp E
T ss_pred c
Confidence 6
No 47
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=92.05 E-value=5.3 Score=34.21 Aligned_cols=191 Identities=12% Similarity=0.002 Sum_probs=97.3
Q ss_pred EEcccCcEEEEee-CCCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEc
Q 016891 104 IIDSCNGLIAFKN-DENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSL 182 (381)
Q Consensus 104 ~~~s~~GLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss 182 (381)
+.-..+|.|.+.. ....++++|| +++...+..... .....++..|+.. ++... . . ....+.+|+.
T Consensus 104 i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~----~~~~~~i~~~~~g---~l~v~-~--~---~~~~i~~~~~ 169 (299)
T 2z2n_A 104 ITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNK----GSYPSFITLGSDN---ALWFT-E--N---QNNAIGRITE 169 (299)
T ss_dssp EEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSST----TCCEEEEEECTTS---CEEEE-E--T---TTTEEEEECT
T ss_pred eEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCC----CCCCceEEEcCCC---CEEEE-e--C---CCCEEEEEcC
Confidence 3334467666654 4567899999 777665432211 1123345555432 22221 1 0 1135677777
Q ss_pred CCCcEEEcccCCCcceecCCCcEEE--CCeeEEEEeeCCCCCCcCEEEEEECCCCeeeeecCCCCCCCCCceeEEEEEE-
Q 016891 183 RTNSWRRIRVDFPYYILHGWDGTFA--DGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEVPLPHLENRNDVLVMFVGNF- 259 (381)
Q Consensus 183 ~t~~W~~~~~~~p~~~~~~~~~v~~--nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~- 259 (381)
++...... . +.... ...++.+ +|.+|+..... ..|..+|+ +.++..+..|.... ....+...
T Consensus 170 -~g~~~~~~-~-~~~~~-~~~~i~~~~~g~l~v~~~~~------~~i~~~~~-~g~~~~~~~~~~~~----~~~~i~~~~ 234 (299)
T 2z2n_A 170 -SGDITEFK-I-PTPAS-GPVGITKGNDDALWFVEIIG------NKIGRITT-SGEITEFKIPTPNA----RPHAITAGA 234 (299)
T ss_dssp -TCCEEEEE-C-SSTTC-CEEEEEECTTSSEEEEETTT------TEEEEECT-TCCEEEEECSSTTC----CEEEEEECS
T ss_pred -CCcEEEee-C-CCCCC-cceeEEECCCCCEEEEccCC------ceEEEECC-CCcEEEEECCCCCC----CceeEEECC
Confidence 67666542 1 11000 0034444 57876654333 27999999 77776665553221 12234443
Q ss_pred CCeEEEEEecCCCceEEEEEECCceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCce
Q 016891 260 SGCLYFSCLCNYPQPVDIWVLMGCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGA 338 (381)
Q Consensus 260 ~G~L~~~~~~~~~~~~~iW~l~~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~ 338 (381)
+|.|++...... .+.+|..+.. .....++. .......+.+ ++|. |++. .....+..||++++++
T Consensus 235 ~g~l~v~~~~~~--~i~~~d~~g~-~~~~~~~~-~~~~~~~i~~-~~g~-l~v~---------~~~~~l~~~~~~~~~~ 298 (299)
T 2z2n_A 235 GIDLWFTEWGAN--KIGRLTSNNI-IEEYPIQI-KSAEPHGICF-DGET-IWFA---------MECDKIGKLTLIKDNM 298 (299)
T ss_dssp TTCEEEEETTTT--EEEEEETTTE-EEEEECSS-SSCCEEEEEE-CSSC-EEEE---------ETTTEEEEEEEC----
T ss_pred CCCEEEeccCCc--eEEEECCCCc-eEEEeCCC-CCCccceEEe-cCCC-EEEE---------ecCCcEEEEEcCcccC
Confidence 688887765433 4555544332 12222321 1123445555 6776 8887 3456899999998876
No 48
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=91.74 E-value=5.8 Score=34.02 Aligned_cols=203 Identities=10% Similarity=0.080 Sum_probs=104.4
Q ss_pred ccCcEEEEee-CCCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCC
Q 016891 107 SCNGLIAFKN-DENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTN 185 (381)
Q Consensus 107 s~~GLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~ 185 (381)
+.+|-+.+.+ ....+.++||..+....++.............++.++...+. ++.... .....+.+|+....
T Consensus 38 ~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~--l~v~~~-----~~~~~i~~~d~~g~ 110 (286)
T 1q7f_A 38 NAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGD--IIVTER-----SPTHQIQIYNQYGQ 110 (286)
T ss_dssp CTTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTE--EEEEEC-----GGGCEEEEECTTSC
T ss_pred CCCCCEEEEECCCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCe--EEEEcC-----CCCCEEEEECCCCc
Confidence 3456555553 456788999886666566543211111112334555433332 222211 01246777874333
Q ss_pred cEEEcccCCCcceecCCCcEEE--CCeeEEEEeeCCCCCCcCEEEEEECCCCeeeeecCCCCCCCCCceeEEEEEE-CCe
Q 016891 186 SWRRIRVDFPYYILHGWDGTFA--DGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEVPLPHLENRNDVLVMFVGNF-SGC 262 (381)
Q Consensus 186 ~W~~~~~~~p~~~~~~~~~v~~--nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~-~G~ 262 (381)
.-+.+. ...... ..++.+ +|.+|+..... ..|..||...+....+..+.... ....++.. +|.
T Consensus 111 ~~~~~~-~~~~~~---~~~i~~~~~g~l~v~~~~~------~~i~~~~~~g~~~~~~~~~~~~~----~p~~i~~~~~g~ 176 (286)
T 1q7f_A 111 FVRKFG-ATILQH---PRGVTVDNKGRIIVVECKV------MRVIIFDQNGNVLHKFGCSKHLE----FPNGVVVNDKQE 176 (286)
T ss_dssp EEEEEC-TTTCSC---EEEEEECTTSCEEEEETTT------TEEEEECTTSCEEEEEECTTTCS----SEEEEEECSSSE
T ss_pred EEEEec-CccCCC---ceEEEEeCCCCEEEEECCC------CEEEEEcCCCCEEEEeCCCCccC----CcEEEEECCCCC
Confidence 333332 111100 033444 58877755433 27999998776666554332211 12234433 688
Q ss_pred EEEEEecCCCceEEEEEECCceeEEEEecC-CCCCeeEEEEEEeCCCEEEEEecccCCccccCCc-EEEEEeCCCCceee
Q 016891 263 LYFSCLCNYPQPVDIWVLMGCWTKTFSFPR-SVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRW-ELFWYDLQNQGAAA 340 (381)
Q Consensus 263 L~~~~~~~~~~~~~iW~l~~~W~~~~~i~~-~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~-~l~~yd~~t~~~~~ 340 (381)
|++...... .+.+|..+.... ..+.. .......-+++.++|. |++.. .... .|..||.+++.+
T Consensus 177 l~v~~~~~~--~i~~~~~~g~~~--~~~~~~g~~~~p~~i~~d~~G~-l~v~~--------~~~~~~i~~~~~~g~~~-- 241 (286)
T 1q7f_A 177 IFISDNRAH--CVKVFNYEGQYL--RQIGGEGITNYPIGVGINSNGE-ILIAD--------NHNNFNLTIFTQDGQLI-- 241 (286)
T ss_dssp EEEEEGGGT--EEEEEETTCCEE--EEESCTTTSCSEEEEEECTTCC-EEEEE--------CSSSCEEEEECTTSCEE--
T ss_pred EEEEECCCC--EEEEEcCCCCEE--EEEccCCccCCCcEEEECCCCC-EEEEe--------CCCCEEEEEECCCCCEE--
Confidence 887766544 677776654322 23331 1012344566667787 77773 2333 799999988877
Q ss_pred eeEEE
Q 016891 341 DQVTI 345 (381)
Q Consensus 341 ~~v~~ 345 (381)
+.+..
T Consensus 242 ~~~~~ 246 (286)
T 1q7f_A 242 SALES 246 (286)
T ss_dssp EEEEE
T ss_pred EEEcc
Confidence 77644
No 49
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=91.64 E-value=6.8 Score=34.65 Aligned_cols=148 Identities=16% Similarity=0.174 Sum_probs=78.8
Q ss_pred eEEEEEEcC-CCcEEEccc-CCCcceecCCCcEEE--CCe-eEEEEeeCCCCCCcCEEEEEECC--CCeeeee----cCC
Q 016891 175 TEIAVYSLR-TNSWRRIRV-DFPYYILHGWDGTFA--DGH-VHWLVTNNPEDYIENLIIAFNLK--SEEFHEV----PLP 243 (381)
Q Consensus 175 ~~~~vyss~-t~~W~~~~~-~~p~~~~~~~~~v~~--nG~-lYwl~~~~~~~~~~~~i~~fD~~--~e~~~~i----~~P 243 (381)
..+.+|+.. ++....+.. ..+... ....+.+ +|. +|....... .|..+|+. +.++..+ ..|
T Consensus 162 ~~v~~~~~~~~g~~~~~~~~~~~~g~--~p~~~~~spdg~~l~v~~~~~~------~v~v~~~~~~~g~~~~~~~~~~~~ 233 (347)
T 3hfq_A 162 DKVYVYNVSDAGQLSEQSVLTMEAGF--GPRHLVFSPDGQYAFLAGELSS------QIASLKYDTQTGAFTQLGIVKTIP 233 (347)
T ss_dssp TEEEEEEECTTSCEEEEEEEECCTTC--CEEEEEECTTSSEEEEEETTTT------EEEEEEEETTTTEEEEEEEEESSC
T ss_pred CEEEEEEECCCCcEEEeeeEEcCCCC--CCceEEECCCCCEEEEEeCCCC------EEEEEEecCCCCceEEeeeeeecC
Confidence 467888887 566554330 011000 0022232 576 665443332 55566654 4665443 233
Q ss_pred CCCCCCCceeEEEEEE-CCe-EEEEEecCCCceEEEEEEC--CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCC
Q 016891 244 HLENRNDVLVMFVGNF-SGC-LYFSCLCNYPQPVDIWVLM--GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGE 319 (381)
Q Consensus 244 ~~~~~~~~~~~~L~~~-~G~-L~~~~~~~~~~~~~iW~l~--~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~ 319 (381)
...... .....+... +|+ |++...... .+.+|.++ ..+..+..++. .+....-+++.++|+.|++..
T Consensus 234 ~~~~~~-~~~~~i~~spdG~~l~v~~~~~~--~v~v~~~~~~g~~~~~~~~~~-~~~~~~~~~~spdg~~l~v~~----- 304 (347)
T 3hfq_A 234 ADYTAH-NGAAAIRLSHDGHFLYVSNRGYN--TLAVFAVTADGHLTLIQQIST-EGDFPRDFDLDPTEAFVVVVN----- 304 (347)
T ss_dssp TTCCSC-CEEEEEEECTTSCEEEEEEETTT--EEEEEEECGGGCEEEEEEEEC-SSSCCCEEEECTTSSEEEEEE-----
T ss_pred CCCCCC-CcceeEEECCCCCEEEEEeCCCC--EEEEEEECCCCcEEEeEEEec-CCCCcCeEEECCCCCEEEEEE-----
Confidence 321111 112233333 676 555554444 89999998 45666666552 122345677888998777763
Q ss_pred ccccCCcEEEEE--eCCCCceeeeeEE
Q 016891 320 DEDINRWELFWY--DLQNQGAAADQVT 344 (381)
Q Consensus 320 ~~~~~~~~l~~y--d~~t~~~~~~~v~ 344 (381)
.....+.+| |.+++++ +.+.
T Consensus 305 ---~~~~~v~v~~~d~~tg~l--~~~~ 326 (347)
T 3hfq_A 305 ---QNTDNATLYARDLTSGKL--SLLQ 326 (347)
T ss_dssp ---TTTTEEEEEEECTTTCCE--EEEE
T ss_pred ---cCCCcEEEEEEeCCCCeE--Eecc
Confidence 233556666 8889999 7774
No 50
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=91.41 E-value=2.1 Score=39.53 Aligned_cols=122 Identities=13% Similarity=0.072 Sum_probs=72.8
Q ss_pred CCeeEEEEeeCCCCCCcCEEEEEECCCCeeeee-cCC--------CCCCCCCceeEEEEEE--CCeEEEEEecCC-----
Q 016891 208 DGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEV-PLP--------HLENRNDVLVMFVGNF--SGCLYFSCLCNY----- 271 (381)
Q Consensus 208 nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P--------~~~~~~~~~~~~L~~~--~G~L~~~~~~~~----- 271 (381)
+|.++|.+..+ .+.++|+.++.-..+ +.. ....-. ..+ .++.. +++||++.....
T Consensus 237 dG~~~~vs~~g-------~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~-g~q-~~a~~~~~~~lyV~~~~~~~~~hk 307 (386)
T 3sjl_D 237 AGRLVWPTYTG-------KIHQIDLSSGDAKFLPAVEALTEAERADGWRPG-GWQ-QVAYHRALDRIYLLVDQRDEWRHK 307 (386)
T ss_dssp TTEEEEEBTTS-------EEEEEECTTSSCEECCCEESSCHHHHHTTEEEC-SSS-CEEEETTTTEEEEEEEECCTTCTT
T ss_pred CCcEEEEeCCC-------EEEEEECCCCcceeecceeccccccccccccCC-Ccc-eeeECCCCCeEEEEeccccccccC
Confidence 78899977654 799999987653322 110 000000 011 12222 468888765321
Q ss_pred CceEEEEEEC-CceeEEEEecCCCCCeeEEEEEEeCCC-EEEEEecccCCccccCCcEEEEEeCCCCceeeeeEEEecCC
Q 016891 272 PQPVDIWVLM-GCWTKTFSFPRSVGDYVKALAYSKSGG-KVLVDKFEYGEDEDINRWELFWYDLQNQGAAADQVTIHGVP 349 (381)
Q Consensus 272 ~~~~~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~-~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~~~~~v~~~~~~ 349 (381)
..--+||+++ ..+..+.+|+ .+....-+++.++++ ++|..+ .....+.+||..|++. .+.|...+.+
T Consensus 308 ~~~~~V~viD~~t~kv~~~i~--vg~~~~~lavs~D~~~~ly~tn--------~~~~~VsViD~~t~k~-~~~i~~~~~p 376 (386)
T 3sjl_D 308 TASRFVVVLDAKTGERLAKFE--MGHEIDSINVSQDEKPLLYALS--------TGDKTLYIHDAESGEE-LRSVNQLGHG 376 (386)
T ss_dssp SCEEEEEEEETTTCCEEEEEE--EEEEECEEEECSSSSCEEEEEE--------TTTTEEEEEETTTCCE-EEEECCCCSS
T ss_pred CCCCEEEEEECCCCeEEEEEE--CCCCcceEEECCCCCeEEEEEc--------CCCCeEEEEECCCCcE-EEEecCCCCC
Confidence 1136899999 8888888887 223344577778886 455542 3456799999999888 2455444433
No 51
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=91.31 E-value=6.7 Score=33.98 Aligned_cols=187 Identities=14% Similarity=0.076 Sum_probs=86.1
Q ss_pred cEEEEeeCCCcEEEEccCCcceee-CCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCC--c
Q 016891 110 GLIAFKNDENGIALWNPSTEEHLI-LPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTN--S 186 (381)
Q Consensus 110 GLl~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~--~ 186 (381)
.+|........++++|+.|++.+. ++...... .......+. +. ++. .. ...+..|+. ++ .
T Consensus 6 ~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~-----~~~~~~~pd-G~--ilv-s~-------~~~V~~~d~-~G~~~ 68 (276)
T 3no2_A 6 HLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWE-----CNSVAATKA-GE--ILF-SY-------SKGAKMITR-DGREL 68 (276)
T ss_dssp EEEEECTTCSEEEEEETTTTEEEEEEECCTTCC-----CCEEEECTT-SC--EEE-EC-------BSEEEEECT-TSCEE
T ss_pred cEEEeeCCCCEEEEEECCCCeEEEEeCCCccCC-----CcCeEECCC-CC--EEE-eC-------CCCEEEECC-CCCEE
Confidence 333443456788999998888665 23221001 011222332 22 222 11 145777887 44 5
Q ss_pred EEEcccCCCcceecCCCcEEECCeeEEEEeeCCCCCCcCEEEEEECCCCeeeeecCCCCCCCCCceeEEEE-EECCeEEE
Q 016891 187 WRRIRVDFPYYILHGWDGTFADGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEVPLPHLENRNDVLVMFVG-NFSGCLYF 265 (381)
Q Consensus 187 W~~~~~~~p~~~~~~~~~v~~nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~L~-~~~G~L~~ 265 (381)
|+.-. ....... ...+.-||.++....... ..|+.+|...+....+.+.............+. ..+|.+.+
T Consensus 69 W~~~~-~~~~~~~--~~~~~~dG~~lv~~~~~~-----~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv 140 (276)
T 3no2_A 69 WNIAA-PAGCEMQ--TARILPDGNALVAWCGHP-----STILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLV 140 (276)
T ss_dssp EEEEC-CTTCEEE--EEEECTTSCEEEEEESTT-----EEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEE
T ss_pred EEEcC-CCCcccc--ccEECCCCCEEEEecCCC-----CEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEE
Confidence 76543 1111111 123345777776654311 268888986654333433221100000000111 22566555
Q ss_pred EEecCCCceEEEEEEC--CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCce
Q 016891 266 SCLCNYPQPVDIWVLM--GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGA 338 (381)
Q Consensus 266 ~~~~~~~~~~~iW~l~--~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~ 338 (381)
+...+. .+..|..+ ..|.. ..+. ...-..+..+|. +++.. ....+++.+|++|++.
T Consensus 141 ~~~~~~--~v~~~d~~G~~~w~~--~~~~----~~~~~~~~~~g~-~~v~~--------~~~~~v~~~d~~tG~~ 198 (276)
T 3no2_A 141 PLFATS--EVREIAPNGQLLNSV--KLSG----TPFSSAFLDNGD-CLVAC--------GDAHCFVQLNLESNRI 198 (276)
T ss_dssp EETTTT--EEEEECTTSCEEEEE--ECSS----CCCEEEECTTSC-EEEEC--------BTTSEEEEECTTTCCE
T ss_pred EecCCC--EEEEECCCCCEEEEE--ECCC----CccceeEcCCCC-EEEEe--------CCCCeEEEEeCcCCcE
Confidence 444333 44444444 33432 2221 011233345777 66652 3455799999996655
No 52
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=91.08 E-value=9.1 Score=35.07 Aligned_cols=202 Identities=16% Similarity=0.170 Sum_probs=102.8
Q ss_pred CeeEEc-ccCcEEEEeeCCCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEE
Q 016891 101 RTPIID-SCNGLIAFKNDENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAV 179 (381)
Q Consensus 101 ~~~~~~-s~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~v 179 (381)
...+++ |.+++|.+.. +..++|||..|++...+-.... + ...+..+.+.+. +.|-++ .. . ...+.+
T Consensus 107 y~~~l~wS~~n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~-~--~~~V~sv~fspd-g~~las--gs--~----Dg~v~i 173 (420)
T 4gga_A 107 YLNLVDWSSGNVLAVAL-DNSVYLWSASSGDILQLLQMEQ-P--GEYISSVAWIKE-GNYLAV--GT--S----SAEVQL 173 (420)
T ss_dssp TCBCEEECTTSEEEEEE-TTEEEEEETTTCCEEEEEECCS-T--TCCEEEEEECTT-SSEEEE--EE--T----TSCEEE
T ss_pred cceeEEECCCCEEEEEe-CCEEEEEECCCCCEEEEEEecC-C--CCcEEEEEECCC-CCEEEE--EE--C----CCeEEE
Confidence 344555 4567775554 6789999999998876543321 1 122445555553 344332 21 1 156888
Q ss_pred EEcCCCcEEEcccCCCcceecCCCcEEECCeeEEEEeeCCCCCCcCEEEEEECCCCeeeeecCCCCCCCCCceeEEEEEE
Q 016891 180 YSLRTNSWRRIRVDFPYYILHGWDGTFADGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEVPLPHLENRNDVLVMFVGNF 259 (381)
Q Consensus 180 yss~t~~W~~~~~~~p~~~~~~~~~v~~nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~ 259 (381)
++.+++.-........... ..+..+|.+-..+..+ ..+..+|..........+.... .....+...
T Consensus 174 Wd~~~~~~~~~~~~h~~~v----~~~s~~~~~l~sgs~d------~~i~~~d~~~~~~~~~~~~~h~----~~~~~~~~~ 239 (420)
T 4gga_A 174 WDVQQQKRLRNMTSHSARV----GSLSWNSYILSSGSRS------GHIHHHDVRVAEHHVATLSGHS----QEVCGLRWA 239 (420)
T ss_dssp EETTTTEEEEEECCCSSCE----EEEEEETTEEEEEETT------SEEEEEETTSSSCEEEEEECCS----SCEEEEEEC
T ss_pred EEcCCCcEEEEEeCCCCce----EEEeeCCCEEEEEeCC------CceeEeeecccceeeEEecccc----cceeeeeec
Confidence 8888764221110111001 3455666654444433 2788888776443322221111 112233333
Q ss_pred -CCeEEEEEecCCCceEEEEEEC---CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCC
Q 016891 260 -SGCLYFSCLCNYPQPVDIWVLM---GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQN 335 (381)
Q Consensus 260 -~G~L~~~~~~~~~~~~~iW~l~---~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t 335 (381)
+|...+....++ .+.||... ..+........ .......+++.+.+..++.... | ..+..|.+||+++
T Consensus 240 ~~g~~l~s~~~D~--~v~i~~~~~~~~~~~~~~~~~~-~~~~V~~~~~~p~~~~~la~~~--g----s~D~~I~iwd~~t 310 (420)
T 4gga_A 240 PDGRHLASGGNDN--LVNVWPSAPGEGGWVPLQTFTQ-HQGAVKAVAWCPWQSNVLATGG--G----TSDRHIRIWNVCS 310 (420)
T ss_dssp TTSSEEEEEETTS--CEEEEESSCCSSCSCCSEEECC-CSSCEEEEEECTTCTTEEEEEE--C----TTTCEEEEEETTT
T ss_pred CCCCeeeeeeccc--cceEEeeccccccceeeeeecc-cCCceeeeeeCCCcccEEEEEe--e----cCCCEEEEEeCCc
Confidence 566666666555 78999887 22332222221 1123444555554443544410 0 1345689999998
Q ss_pred Cce
Q 016891 336 QGA 338 (381)
Q Consensus 336 ~~~ 338 (381)
++.
T Consensus 311 ~~~ 313 (420)
T 4gga_A 311 GAC 313 (420)
T ss_dssp TEE
T ss_pred ccc
Confidence 877
No 53
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=90.57 E-value=10 Score=34.65 Aligned_cols=193 Identities=12% Similarity=0.060 Sum_probs=96.6
Q ss_pred CcEEEEee-CCCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCCcE
Q 016891 109 NGLIAFKN-DENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTNSW 187 (381)
Q Consensus 109 ~GLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W 187 (381)
+|.+++.. ....+.++|+.+++.....+.............+.+.+. + +++.... ....+.+|+.+++.-
T Consensus 133 ~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~-~--~~~~s~~------~d~~v~~~d~~~~~~ 203 (433)
T 3bws_A 133 NTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEH-N--ELWVSQM------QANAVHVFDLKTLAY 203 (433)
T ss_dssp SSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGG-T--EEEEEEG------GGTEEEEEETTTCCE
T ss_pred CCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCC-C--EEEEEEC------CCCEEEEEECCCceE
Confidence 66666554 455799999999887764333110011122333444322 2 2222211 115688888887643
Q ss_pred EEcccCCCcceecCCCcEEE--CCe-eEEEEeeCCCCCCcCEEEEEECCCCeeeeecCCCCCCCCCceeEEEEEE-CCe-
Q 016891 188 RRIRVDFPYYILHGWDGTFA--DGH-VHWLVTNNPEDYIENLIIAFNLKSEEFHEVPLPHLENRNDVLVMFVGNF-SGC- 262 (381)
Q Consensus 188 ~~~~~~~p~~~~~~~~~v~~--nG~-lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~-~G~- 262 (381)
...-....... .++.+ +|. +|..+..+. .|..+|+.+.+.... ++... ....+... +|+
T Consensus 204 ~~~~~~~~~~~----~~~~~~~~~~~l~~~~~~~~------~i~~~d~~~~~~~~~-~~~~~-----~~~~~~~~~~g~~ 267 (433)
T 3bws_A 204 KATVDLTGKWS----KILLYDPIRDLVYCSNWISE------DISVIDRKTKLEIRK-TDKIG-----LPRGLLLSKDGKE 267 (433)
T ss_dssp EEEEECSSSSE----EEEEEETTTTEEEEEETTTT------EEEEEETTTTEEEEE-CCCCS-----EEEEEEECTTSSE
T ss_pred EEEEcCCCCCe----eEEEEcCCCCEEEEEecCCC------cEEEEECCCCcEEEE-ecCCC-----CceEEEEcCCCCE
Confidence 32210101000 22222 343 444443332 799999988765332 22211 12233332 564
Q ss_pred EEEEEecCC-----CceEEEEEEC-CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCC
Q 016891 263 LYFSCLCNY-----PQPVDIWVLM-GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQ 336 (381)
Q Consensus 263 L~~~~~~~~-----~~~~~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~ 336 (381)
|++...... ...+.+|.++ .+-......+ ....-+++.++|+.+++.. .....+.+||++++
T Consensus 268 l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~----~~~~~~~~~~~g~~l~~~~--------~~~~~v~v~d~~~~ 335 (433)
T 3bws_A 268 LYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPP----GNKRHIVSGNTENKIYVSD--------MCCSKIEVYDLKEK 335 (433)
T ss_dssp EEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEE----ECEEEEEECSSTTEEEEEE--------TTTTEEEEEETTTT
T ss_pred EEEEECCCCccccCCCeEEEEECCCCcEEeeccCC----CCcceEEECCCCCEEEEEe--------cCCCEEEEEECCCC
Confidence 444443221 2277888877 3322221111 1234466677887676663 35568999999988
Q ss_pred ce
Q 016891 337 GA 338 (381)
Q Consensus 337 ~~ 338 (381)
+.
T Consensus 336 ~~ 337 (433)
T 3bws_A 336 KV 337 (433)
T ss_dssp EE
T ss_pred cE
Confidence 77
No 54
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=90.36 E-value=4.5 Score=36.21 Aligned_cols=183 Identities=11% Similarity=0.099 Sum_probs=85.0
Q ss_pred CCCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCCc-EEEcccCCC
Q 016891 117 DENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTNS-WRRIRVDFP 195 (381)
Q Consensus 117 ~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~-W~~~~~~~p 195 (381)
.+..+.|||..++.+..+-.... + ......+.+.+.. .+- +... . ...+.+|+..++. |+... ...
T Consensus 31 ~d~~i~iw~~~~~~~~~~~~~~~-h--~~~v~~~~~s~~~-~~l--~s~s--~----d~~v~vwd~~~~~~~~~~~-~~~ 97 (377)
T 3dwl_C 31 ATNQVELYEQDGNGWKHARTFSD-H--DKIVTCVDWAPKS-NRI--VTCS--Q----DRNAYVYEKRPDGTWKQTL-VLL 97 (377)
T ss_dssp SSSCBCEEEEETTEEEECCCBCC-C--SSCEEEEEECTTT-CCE--EEEE--T----TSSEEEC------CCCCEE-ECC
T ss_pred CCCEEEEEEccCCceEEEEEEec-C--CceEEEEEEeCCC-CEE--EEEe--C----CCeEEEEEcCCCCceeeee-Eec
Confidence 45678899998886555444432 1 1234445555543 222 2211 1 1457788877765 44333 110
Q ss_pred cceecCC-CcEEE--CCeeEEEEeeCCCCCCcCEEEEEECCCCe----eeeecCCCCCCCCCceeEEEEEE-CCeEEEEE
Q 016891 196 YYILHGW-DGTFA--DGHVHWLVTNNPEDYIENLIIAFNLKSEE----FHEVPLPHLENRNDVLVMFVGNF-SGCLYFSC 267 (381)
Q Consensus 196 ~~~~~~~-~~v~~--nG~lYwl~~~~~~~~~~~~i~~fD~~~e~----~~~i~~P~~~~~~~~~~~~L~~~-~G~L~~~~ 267 (381)
. . ... ..+.+ +|.....+..+. .|..+|+.+.+ ...+..|.. .....+.-. +|++.+..
T Consensus 98 ~-~-~~~v~~~~~~~~~~~l~~~~~d~------~i~iwd~~~~~~~~~~~~~~~~h~-----~~v~~~~~~~~~~~l~~~ 164 (377)
T 3dwl_C 98 R-L-NRAATFVRWSPNEDKFAVGSGAR------VISVCYFEQENDWWVSKHLKRPLR-----STILSLDWHPNNVLLAAG 164 (377)
T ss_dssp C-C-SSCEEEEECCTTSSCCEEEESSS------CEEECCC-----CCCCEEECSSCC-----SCEEEEEECTTSSEEEEE
T ss_pred c-c-CCceEEEEECCCCCEEEEEecCC------eEEEEEECCcccceeeeEeecccC-----CCeEEEEEcCCCCEEEEE
Confidence 0 0 000 22222 454433333332 68888887764 233332211 122233333 56766666
Q ss_pred ecCCCceEEEEEEC-C---------cee-------EEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEE
Q 016891 268 LCNYPQPVDIWVLM-G---------CWT-------KTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFW 330 (381)
Q Consensus 268 ~~~~~~~~~iW~l~-~---------~W~-------~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~ 330 (381)
..++ .+.||.++ . .|. ....+. ......-+++.++|..|+.. ..+..+.+
T Consensus 165 ~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~sp~~~~l~~~---------~~d~~i~i 231 (377)
T 3dwl_C 165 CADR--KAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYP--SGGWVHAVGFSPSGNALAYA---------GHDSSVTI 231 (377)
T ss_dssp ESSS--CEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCC--CSSSEEEEEECTTSSCEEEE---------ETTTEEC-
T ss_pred eCCC--EEEEEEEEecccCCCccccccccccchhhhhhccc--CCceEEEEEECCCCCEEEEE---------eCCCcEEE
Confidence 6655 79999985 1 121 111111 11335566777888845545 35567999
Q ss_pred EeCCCCce
Q 016891 331 YDLQNQGA 338 (381)
Q Consensus 331 yd~~t~~~ 338 (381)
||+++++.
T Consensus 232 wd~~~~~~ 239 (377)
T 3dwl_C 232 AYPSAPEQ 239 (377)
T ss_dssp CEECSTTS
T ss_pred EECCCCCC
Confidence 99988764
No 55
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=89.89 E-value=11 Score=33.94 Aligned_cols=129 Identities=14% Similarity=0.120 Sum_probs=68.8
Q ss_pred eEEEEEEcCCC--cEEEcccCCCcce---e----cCCCcEEECCeeEEEEeeCCCCCCcCEEEEEECCCC--eeeeecCC
Q 016891 175 TEIAVYSLRTN--SWRRIRVDFPYYI---L----HGWDGTFADGHVHWLVTNNPEDYIENLIIAFNLKSE--EFHEVPLP 243 (381)
Q Consensus 175 ~~~~vyss~t~--~W~~~~~~~p~~~---~----~~~~~v~~nG~lYwl~~~~~~~~~~~~i~~fD~~~e--~~~~i~~P 243 (381)
-.+..|+.+++ .|+.-. ..+... . ....++..+|.+|.....+ .+.++|+.+. .|+. +.+
T Consensus 198 g~l~~~d~~tG~~~w~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g-------~l~~~d~~tG~~~w~~-~~~ 268 (376)
T 3q7m_A 198 GRVSAVLMEQGQMIWQQRI-SQATGSTEIDRLSDVDTTPVVVNGVVFALAYNG-------NLTALDLRSGQIMWKR-ELG 268 (376)
T ss_dssp TEEEEEETTTCCEEEEEEC-CC-----------CCCCCCEEETTEEEEECTTS-------CEEEEETTTCCEEEEE-CCC
T ss_pred CEEEEEECCCCcEEEEEec-ccCCCCcccccccccCCCcEEECCEEEEEecCc-------EEEEEECCCCcEEeec-cCC
Confidence 35777887776 587643 222110 0 1126677889988866443 6999999765 3432 221
Q ss_pred CCCCCCCceeEEEEEECCeEEEEEecCCCceEEEEEEC---CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCc
Q 016891 244 HLENRNDVLVMFVGNFSGCLYFSCLCNYPQPVDIWVLM---GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGED 320 (381)
Q Consensus 244 ~~~~~~~~~~~~L~~~~G~L~~~~~~~~~~~~~iW~l~---~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~ 320 (381)
. ...+...+|.|++..... .+..+..+ ..|.... +. ......+.. .++.|++.
T Consensus 269 ~--------~~~~~~~~~~l~~~~~~g---~l~~~d~~tG~~~w~~~~-~~--~~~~~~~~~---~~~~l~v~------- 324 (376)
T 3q7m_A 269 S--------VNDFIVDGNRIYLVDQND---RVMALTIDGGVTLWTQSD-LL--HRLLTSPVL---YNGNLVVG------- 324 (376)
T ss_dssp C--------EEEEEEETTEEEEEETTC---CEEEEETTTCCEEEEECT-TT--TSCCCCCEE---ETTEEEEE-------
T ss_pred C--------CCCceEECCEEEEEcCCC---eEEEEECCCCcEEEeecc-cC--CCcccCCEE---ECCEEEEE-------
Confidence 1 223445577777765432 33333333 3454320 11 001112221 23447777
Q ss_pred cccCCcEEEEEeCCCCce
Q 016891 321 EDINRWELFWYDLQNQGA 338 (381)
Q Consensus 321 ~~~~~~~l~~yd~~t~~~ 338 (381)
.....++++|+++++.
T Consensus 325 --~~~g~l~~~d~~tG~~ 340 (376)
T 3q7m_A 325 --DSEGYLHWINVEDGRF 340 (376)
T ss_dssp --CTTSEEEEEETTTCCE
T ss_pred --eCCCeEEEEECCCCcE
Confidence 4556799999999887
No 56
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=89.03 E-value=11 Score=32.88 Aligned_cols=188 Identities=12% Similarity=-0.045 Sum_probs=98.1
Q ss_pred EEEEeeCCCcEEEEcc-CCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCC---c
Q 016891 111 LIAFKNDENGIALWNP-STEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTN---S 186 (381)
Q Consensus 111 Ll~~~~~~~~~~V~NP-~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~---~ 186 (381)
+|+.......+.+||. .+++...+.... + ......+.+.+ +.+-+.+- . ...+.+|+.++. .
T Consensus 71 ~l~~~~~dg~i~~wd~~~~~~~~~~~~~~--~--~~~v~~l~~~~--~~~l~s~~----~----d~~i~iwd~~~~~~~~ 136 (342)
T 1yfq_A 71 QIYVGTVQGEILKVDLIGSPSFQALTNNE--A--NLGICRICKYG--DDKLIAAS----W----DGLIEVIDPRNYGDGV 136 (342)
T ss_dssp EEEEEETTSCEEEECSSSSSSEEECBSCC--C--CSCEEEEEEET--TTEEEEEE----T----TSEEEEECHHHHTTBC
T ss_pred EEEEEcCCCeEEEEEeccCCceEeccccC--C--CCceEEEEeCC--CCEEEEEc----C----CCeEEEEccccccccc
Confidence 4555556778999999 888877765410 1 11244566666 44332211 1 145677776530 0
Q ss_pred ----EEEcccCCCcceecCC-CcEEECCeeEEEEeeCCCCCCcCEEEEEECCC-Ce--eeeecCCCCCCCCCceeEEEEE
Q 016891 187 ----WRRIRVDFPYYILHGW-DGTFADGHVHWLVTNNPEDYIENLIIAFNLKS-EE--FHEVPLPHLENRNDVLVMFVGN 258 (381)
Q Consensus 187 ----W~~~~~~~p~~~~~~~-~~v~~nG~lYwl~~~~~~~~~~~~i~~fD~~~-e~--~~~i~~P~~~~~~~~~~~~L~~ 258 (381)
.+.+. ... . ... .++.+++.-...+..+ ..|..+|+.+ .. ......+... ....+..
T Consensus 137 ~~~~~~~~~-~~~--~-~~~v~~~~~~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~~~~~~~~-----~i~~i~~ 201 (342)
T 1yfq_A 137 IAVKNLNSN-NTK--V-KNKIFTMDTNSSRLIVGMNN------SQVQWFRLPLCEDDNGTIEESGLKY-----QIRDVAL 201 (342)
T ss_dssp EEEEESCSS-SSS--S-CCCEEEEEECSSEEEEEEST------TEEEEEESSCCTTCCCEEEECSCSS-----CEEEEEE
T ss_pred ccccCCeee-EEe--e-CCceEEEEecCCcEEEEeCC------CeEEEEECCccccccceeeecCCCC-----ceeEEEE
Confidence 22222 111 0 011 3344444332223222 2799999987 32 3333322221 1223333
Q ss_pred E--CCeEEEEEecCCCceEEEEEEC-C--c--eeEEEEec-CCC-------CCeeEEEEEEeCCCEEEEEecccCCcccc
Q 016891 259 F--SGCLYFSCLCNYPQPVDIWVLM-G--C--WTKTFSFP-RSV-------GDYVKALAYSKSGGKVLVDKFEYGEDEDI 323 (381)
Q Consensus 259 ~--~G~L~~~~~~~~~~~~~iW~l~-~--~--W~~~~~i~-~~~-------~~~~~~~~~~~~g~~i~l~~~~~~~~~~~ 323 (381)
. +|.+.++...++ .+.||.++ . . ......+. ... ......+.+.+++..|+.. .
T Consensus 202 ~~~~~~~l~~~~~dg--~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~---------~ 270 (342)
T 1yfq_A 202 LPKEQEGYACSSIDG--RVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTA---------G 270 (342)
T ss_dssp CSGGGCEEEEEETTS--EEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEE---------E
T ss_pred CCCCCCEEEEEecCC--cEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEe---------c
Confidence 3 567666666655 89999998 3 1 33334443 110 1245566777788845444 3
Q ss_pred CCcEEEEEeCCCCce
Q 016891 324 NRWELFWYDLQNQGA 338 (381)
Q Consensus 324 ~~~~l~~yd~~t~~~ 338 (381)
....+.+||+++++.
T Consensus 271 ~dg~i~vwd~~~~~~ 285 (342)
T 1yfq_A 271 SDGIISCWNLQTRKK 285 (342)
T ss_dssp TTSCEEEEETTTTEE
T ss_pred CCceEEEEcCccHhH
Confidence 456799999998876
No 57
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=88.44 E-value=8 Score=35.27 Aligned_cols=69 Identities=14% Similarity=0.153 Sum_probs=46.1
Q ss_pred CCeEEEEEecCCC-----ceEEEEEEC-CceeEEEEecCCCCCeeEEEEEEeCCC-EEEEEecccCCccccCCcEEEEEe
Q 016891 260 SGCLYFSCLCNYP-----QPVDIWVLM-GCWTKTFSFPRSVGDYVKALAYSKSGG-KVLVDKFEYGEDEDINRWELFWYD 332 (381)
Q Consensus 260 ~G~L~~~~~~~~~-----~~~~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~-~i~l~~~~~~~~~~~~~~~l~~yd 332 (381)
+++||+....... ..-+||+++ .....+.+|+ .+....-+.+.++|+ +++..+ .....|.+||
T Consensus 278 ~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~--~g~~p~~i~~s~Dg~~~l~v~~--------~~~~~V~ViD 347 (373)
T 2mad_H 278 SDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS--LGHDVDAISVAQDGGPDLYALS--------AGTEVLHIYD 347 (373)
T ss_pred CCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEE--CCCCcCeEEECCCCCeEEEEEc--------CCCCeEEEEE
Confidence 3567776543210 123699999 7888888886 233356677788888 455542 2356899999
Q ss_pred CCCCce
Q 016891 333 LQNQGA 338 (381)
Q Consensus 333 ~~t~~~ 338 (381)
.+|++.
T Consensus 348 ~~t~~v 353 (373)
T 2mad_H 348 AGAGDQ 353 (373)
T ss_pred CCCCCE
Confidence 999888
No 58
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=88.42 E-value=15 Score=33.74 Aligned_cols=185 Identities=8% Similarity=-0.013 Sum_probs=98.5
Q ss_pred CcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCCcEEEcccCCCcce
Q 016891 119 NGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTNSWRRIRVDFPYYI 198 (381)
Q Consensus 119 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W~~~~~~~p~~~ 198 (381)
..++++|..|++...+...+. ....+.+.|.. .+ ++.... ..+...+.+++.+++..+.+. ..+...
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~~------~~~~~~~spdg-~~-la~~~~----~~g~~~i~~~d~~~~~~~~l~-~~~~~~ 269 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFPR------HNGAPAFSPDG-SK-LAFALS----KTGSLNLYVMDLASGQIRQVT-DGRSNN 269 (415)
T ss_dssp CEEEEEETTTCCEEEEECCSS------CEEEEEECTTS-SE-EEEEEC----TTSSCEEEEEETTTCCEEECC-CCSSCE
T ss_pred cEEEEEECCCCcEEEeecCCC------cccCEEEcCCC-CE-EEEEEe----cCCCceEEEEECCCCCEEeCc-CCCCcc
Confidence 489999999998877654321 12344455432 22 222211 122367888999988776665 222111
Q ss_pred ecCCCcEEE--CCe-eEEEEeeCCCCCCcCEEEEEECCCCeeeeecCCCCCCCCCceeEEEEEE-CCeEEE-EEecCCCc
Q 016891 199 LHGWDGTFA--DGH-VHWLVTNNPEDYIENLIIAFNLKSEEFHEVPLPHLENRNDVLVMFVGNF-SGCLYF-SCLCNYPQ 273 (381)
Q Consensus 199 ~~~~~~v~~--nG~-lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~-~G~L~~-~~~~~~~~ 273 (381)
..+.+ +|. |++.+..+. ...|..+|+.+.+...+.... .....+.-. +|+..+ .....+..
T Consensus 270 ----~~~~~spdg~~l~~~s~~~g----~~~i~~~d~~~~~~~~l~~~~------~~~~~~~~spdG~~l~~~~~~~g~~ 335 (415)
T 2hqs_A 270 ----TEPTWFPDSQNLAFTSDQAG----RPQVYKVNINGGAPQRITWEG------SQNQDADVSSDGKFMVMVSSNGGQQ 335 (415)
T ss_dssp ----EEEEECTTSSEEEEEECTTS----SCEEEEEETTSSCCEECCCSS------SEEEEEEECTTSSEEEEEEECSSCE
T ss_pred ----cceEECCCCCEEEEEECCCC----CcEEEEEECCCCCEEEEecCC------CcccCeEECCCCCEEEEEECcCCce
Confidence 12222 564 555443221 136888899887654432211 122233333 665444 44433323
Q ss_pred eEEEEEEC-CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCceeeeeE
Q 016891 274 PVDIWVLM-GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGAAADQV 343 (381)
Q Consensus 274 ~~~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~~~~~v 343 (381)
.+.+|.++ .+.. .+... .....+.+.++|..|++.+. +.....|+.+|++++.. +.+
T Consensus 336 ~i~~~d~~~~~~~---~l~~~--~~~~~~~~spdg~~l~~~s~------~~~~~~l~~~d~~g~~~--~~l 393 (415)
T 2hqs_A 336 HIAKQDLATGGVQ---VLSST--FLDETPSLAPNGTMVIYSSS------QGMGSVLNLVSTDGRFK--ARL 393 (415)
T ss_dssp EEEEEETTTCCEE---ECCCS--SSCEEEEECTTSSEEEEEEE------ETTEEEEEEEETTSCCE--EEC
T ss_pred EEEEEECCCCCEE---EecCC--CCcCCeEEcCCCCEEEEEEc------CCCccEEEEEECCCCcE--EEe
Confidence 56666665 4432 23311 13455677789986666630 01122699999999888 777
No 59
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=88.40 E-value=23 Score=35.91 Aligned_cols=160 Identities=11% Similarity=0.024 Sum_probs=84.9
Q ss_pred eEEEEEEcCCCcEEEcccCCCcceecCCCcEEE---CCeeEEEEeeCCCCCCcCEEEEEECCCCeeeeecCCCCCCCCCc
Q 016891 175 TEIAVYSLRTNSWRRIRVDFPYYILHGWDGTFA---DGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEVPLPHLENRNDV 251 (381)
Q Consensus 175 ~~~~vyss~t~~W~~~~~~~p~~~~~~~~~v~~---nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~ 251 (381)
..++++++.+..-+.+. ..... . ..++.+ +|.|||...... ..|..+++....-+.+-. ....
T Consensus 493 ~~I~v~~ldG~~~~~l~-~~~l~--~-P~gIaVDp~~g~LYwtD~g~~-----~~I~~~~~dG~~~~~lv~-~~l~---- 558 (791)
T 3m0c_C 493 GTVSVADTKGVKRKTLF-RENGS--K-PRAIVVDPVHGFMYWTDWGTP-----AKIKKGGLNGVDIYSLVT-ENIQ---- 558 (791)
T ss_dssp TEEEEEETTSSSEEEEE-ECTTC--C-EEEEEEETTTTEEEEEECSSS-----CEEEEEETTSCCEEEEEC-SSCS----
T ss_pred CeEEEEeCCCCeEEEEE-eCCCC--C-cceEEEecCCCCEEEecCCCC-----CeEEEEecCCCceEEEEe-CCCC----
Confidence 46777887765544443 11110 0 155665 589999875431 279999998755544411 1111
Q ss_pred eeEEEEE--ECCeEEEEEecCCCceEEEEEECCceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEE
Q 016891 252 LVMFVGN--FSGCLYFSCLCNYPQPVDIWVLMGCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELF 329 (381)
Q Consensus 252 ~~~~L~~--~~G~L~~~~~~~~~~~~~iW~l~~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~ 329 (381)
..-.|+. .+|+||++..... .|..-.++..-.++. +.. .+....|+++...++.||+.. .....|.
T Consensus 559 ~P~GLavD~~~~~LYwaD~~~~--~I~~~d~dG~~~~~v-~~~-~~~l~~P~glav~~~~lYwtD--------~~~~~I~ 626 (791)
T 3m0c_C 559 WPNGITLDLLSGRLYWVDSKLH--SISSIDVNGGNRKTI-LED-EKRLAHPFSLAVFEDKVFWTD--------IINEAIF 626 (791)
T ss_dssp CEEEEEEETTTTEEEEEETTTT--EEEEEETTSCSCEEE-EEC-TTTTSSEEEEEEETTEEEEEE--------TTTTEEE
T ss_pred CceEEEEecCCCeEEEEeCCCC--cEEEEecCCCceEEE-ecC-CCccCCCCEEEEeCCEEEEEE--------CCCCEEE
Confidence 1223433 4789999875433 443333333222211 111 112335666666566688883 3456799
Q ss_pred EEeCCCCceeeeeEEEecCCCCceeEEEEeecee
Q 016891 330 WYDLQNQGAAADQVTIHGVPQGCRDTIVCVDSLV 363 (381)
Q Consensus 330 ~yd~~t~~~~~~~v~~~~~~~~~~~~~~y~~sl~ 363 (381)
..|..+++- ..+-..+.... +.+.+|.+...
T Consensus 627 ~~dk~tG~~--~~~l~~~l~~P-~~i~v~h~~~Q 657 (791)
T 3m0c_C 627 SANRLTGSD--VNLLAENLLSP-EDMVLFHNLTQ 657 (791)
T ss_dssp EEETTTCCC--CEEEECSCSCC-CCEEEESGGGS
T ss_pred EEeCCCCcc--eEEeecCCCCc-eeEeeeccccC
Confidence 999877755 44323333333 45666766554
No 60
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=88.23 E-value=12 Score=32.49 Aligned_cols=187 Identities=12% Similarity=0.033 Sum_probs=99.2
Q ss_pred CcEEEEee-CCCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCCcE
Q 016891 109 NGLIAFKN-DENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTNSW 187 (381)
Q Consensus 109 ~GLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W 187 (381)
.+.+++.. ....+.++|+.|++....-.... ... .+.+++..+ + ++.... ....+.+++..++.-
T Consensus 9 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~-----~~~-~~~~s~dg~-~-l~~~~~------~~~~i~~~d~~~~~~ 74 (331)
T 3u4y_A 9 SNFGIVVEQHLRRISFFSTDTLEILNQITLGY-----DFV-DTAITSDCS-N-VVVTSD------FCQTLVQIETQLEPP 74 (331)
T ss_dssp CCEEEEEEGGGTEEEEEETTTCCEEEEEECCC-----CEE-EEEECSSSC-E-EEEEES------TTCEEEEEECSSSSC
T ss_pred CCEEEEEecCCCeEEEEeCcccceeeeEEccC-----Ccc-eEEEcCCCC-E-EEEEeC------CCCeEEEEECCCCce
Confidence 34444333 45678999999988765432221 122 555665433 2 222211 114788899888763
Q ss_pred --EEccc-CCCcceecCCCcEEE--CCe-eEEEEeeCCCCCCcCEEEEEECCCCeeee-ecCCCCCCCCCceeEEEEEE-
Q 016891 188 --RRIRV-DFPYYILHGWDGTFA--DGH-VHWLVTNNPEDYIENLIIAFNLKSEEFHE-VPLPHLENRNDVLVMFVGNF- 259 (381)
Q Consensus 188 --~~~~~-~~p~~~~~~~~~v~~--nG~-lYwl~~~~~~~~~~~~i~~fD~~~e~~~~-i~~P~~~~~~~~~~~~L~~~- 259 (381)
+.+.. ..|. .++.+ +|. +| ...... ....|..+|+.+.+... ++.... ...+...
T Consensus 75 ~~~~~~~~~~~~------~~~~~s~dg~~l~-~~~~~~---~~~~i~v~d~~~~~~~~~~~~~~~-------~~~~~~sp 137 (331)
T 3u4y_A 75 KVVAIQEGQSSM------ADVDITPDDQFAV-TVTGLN---HPFNMQSYSFLKNKFISTIPIPYD-------AVGIAISP 137 (331)
T ss_dssp EEEEEEECSSCC------CCEEECTTSSEEE-ECCCSS---SSCEEEEEETTTTEEEEEEECCTT-------EEEEEECT
T ss_pred eEEecccCCCCc------cceEECCCCCEEE-EecCCC---CcccEEEEECCCCCeEEEEECCCC-------ccceEECC
Confidence 22220 1111 21332 354 44 332221 11269999998876533 233211 1233333
Q ss_pred CCe-EEEEEecCCCce-EEEEEEC--CceeE--EEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeC
Q 016891 260 SGC-LYFSCLCNYPQP-VDIWVLM--GCWTK--TFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDL 333 (381)
Q Consensus 260 ~G~-L~~~~~~~~~~~-~~iW~l~--~~W~~--~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~ 333 (381)
+|+ |++...... . +.+|.++ ..-.. ...+. .+....-+.+.++|+.+++.. .....+.+||+
T Consensus 138 dg~~l~~~~~~~~--~~i~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~spdg~~l~v~~--------~~~~~v~v~d~ 205 (331)
T 3u4y_A 138 NGNGLILIDRSSA--NTVRRFKIDADGVLFDTGQEFIS--GGTRPFNITFTPDGNFAFVAN--------LIGNSIGILET 205 (331)
T ss_dssp TSSCEEEEEETTT--TEEEEEEECTTCCEEEEEEEEEC--SSSSEEEEEECTTSSEEEEEE--------TTTTEEEEEEC
T ss_pred CCCEEEEEecCCC--ceEEEEEECCCCcEeecCCcccc--CCCCccceEECCCCCEEEEEe--------CCCCeEEEEEC
Confidence 565 666655444 5 9999988 22111 12222 223356677788898677763 34567999999
Q ss_pred CCCce
Q 016891 334 QNQGA 338 (381)
Q Consensus 334 ~t~~~ 338 (381)
++++.
T Consensus 206 ~~~~~ 210 (331)
T 3u4y_A 206 QNPEN 210 (331)
T ss_dssp SSTTS
T ss_pred CCCcc
Confidence 98774
No 61
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=87.42 E-value=16 Score=32.97 Aligned_cols=201 Identities=9% Similarity=0.021 Sum_probs=100.9
Q ss_pred cEEEEeeCCCcEEEEccCCcceeeCCCCCC-C-CCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCCcE
Q 016891 110 GLIAFKNDENGIALWNPSTEEHLILPKFWG-D-LKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTNSW 187 (381)
Q Consensus 110 GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~-~-~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W 187 (381)
.+|+....+..+.|||..+++...-...+. . .........+.+.+....+- +.. . . ...+.+|+.+++..
T Consensus 95 ~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l-~s~-~--~----dg~i~iwd~~~~~~ 166 (402)
T 2aq5_A 95 NVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVL-LSA-G--C----DNVILVWDVGTGAA 166 (402)
T ss_dssp TEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEE-EEE-E--T----TSCEEEEETTTTEE
T ss_pred CEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEE-EEE-c--C----CCEEEEEECCCCCc
Confidence 344444466789999988875321000000 0 00011234455555433322 221 1 1 14588888887754
Q ss_pred EEcc--cCCCcceecCCCcEEE--CCeeEEEEeeCCCCCCcCEEEEEECCCCeeeeec-CCCCCCCCCceeEEEEE-ECC
Q 016891 188 RRIR--VDFPYYILHGWDGTFA--DGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEVP-LPHLENRNDVLVMFVGN-FSG 261 (381)
Q Consensus 188 ~~~~--~~~p~~~~~~~~~v~~--nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~-~P~~~~~~~~~~~~L~~-~~G 261 (381)
...- ....... ..+.+ +|.....+..+. .|..+|+.+.+....- ...... ....+.- -+|
T Consensus 167 ~~~~~~~~~~~~v----~~~~~~~~~~~l~~~~~d~------~i~iwd~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 232 (402)
T 2aq5_A 167 VLTLGPDVHPDTI----YSVDWSRDGALICTSCRDK------RVRVIEPRKGTVVAEKDRPHEGT----RPVHAVFVSEG 232 (402)
T ss_dssp EEEECTTTCCSCE----EEEEECTTSSCEEEEETTS------EEEEEETTTTEEEEEEECSSCSS----SCCEEEECSTT
T ss_pred cEEEecCCCCCce----EEEEECCCCCEEEEEecCC------cEEEEeCCCCceeeeeccCCCCC----cceEEEEcCCC
Confidence 3221 0111111 23333 565544444332 7999999886653321 111110 0112332 367
Q ss_pred eEEEEEec-CCCceEEEEEEC--CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCc-
Q 016891 262 CLYFSCLC-NYPQPVDIWVLM--GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQG- 337 (381)
Q Consensus 262 ~L~~~~~~-~~~~~~~iW~l~--~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~- 337 (381)
++.++... .....+.||.+. ..=.....++. ......+.+.+++..|++.+ ..+..+.+||+++++
T Consensus 233 ~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~~~g--------~~dg~i~i~d~~~~~~ 302 (402)
T 2aq5_A 233 KILTTGFSRMSERQVALWDTKHLEEPLSLQELDT--SSGVLLPFFDPDTNIVYLCG--------KGDSSIRYFEITSEAP 302 (402)
T ss_dssp EEEEEEECTTCCEEEEEEETTBCSSCSEEEECCC--CSSCEEEEEETTTTEEEEEE--------TTCSCEEEEEECSSTT
T ss_pred cEEEEeccCCCCceEEEEcCccccCCceEEeccC--CCceeEEEEcCCCCEEEEEE--------cCCCeEEEEEecCCCc
Confidence 76666632 122389999988 22122333331 12345567788888666663 345679999999988
Q ss_pred -eeeeeEE
Q 016891 338 -AAADQVT 344 (381)
Q Consensus 338 -~~~~~v~ 344 (381)
+ +.+.
T Consensus 303 ~~--~~l~ 308 (402)
T 2aq5_A 303 FL--HYLS 308 (402)
T ss_dssp CE--EEEE
T ss_pred ce--Eeec
Confidence 5 5553
No 62
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=87.27 E-value=16 Score=32.73 Aligned_cols=190 Identities=10% Similarity=0.029 Sum_probs=91.8
Q ss_pred EEcccCcEEEEeeCCCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcC
Q 016891 104 IIDSCNGLIAFKNDENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLR 183 (381)
Q Consensus 104 ~~~s~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~ 183 (381)
.+...+|.|.+......++.+|+.|++.+.--........ .. .+ + ++ +|+... ..-.+..|+.+
T Consensus 98 ~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~-~p--~~--~---~~-~v~v~~-------~~g~l~~~d~~ 161 (376)
T 3q7m_A 98 GVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALS-RP--VV--S---DG-LVLIHT-------SNGQLQALNEA 161 (376)
T ss_dssp EEEEETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCS-CC--EE--E---TT-EEEEEC-------TTSEEEEEETT
T ss_pred CceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEc-CC--EE--E---CC-EEEEEc-------CCCeEEEEECC
Confidence 3445678887777667899999999886532111111100 00 11 0 12 222221 11467788888
Q ss_pred CC--cEEEcccCCCc-ceecCCCcEEECCeeEEEEeeCCCCCCcCEEEEEECCCC--eeeee-cCCCCCCCC---CceeE
Q 016891 184 TN--SWRRIRVDFPY-YILHGWDGTFADGHVHWLVTNNPEDYIENLIIAFNLKSE--EFHEV-PLPHLENRN---DVLVM 254 (381)
Q Consensus 184 t~--~W~~~~~~~p~-~~~~~~~~v~~nG~lYwl~~~~~~~~~~~~i~~fD~~~e--~~~~i-~~P~~~~~~---~~~~~ 254 (381)
++ .|+.-. ..+. ........+..+|.+|.-...+ .+.++|+.+. .|+.- ..|...... .....
T Consensus 162 tG~~~W~~~~-~~~~~~~~~~~~~~~~~~~v~~g~~~g-------~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~ 233 (376)
T 3q7m_A 162 DGAVKWTVNL-DMPSLSLRGESAPTTAFGAAVVGGDNG-------RVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDT 233 (376)
T ss_dssp TCCEEEEEEC-CC-----CCCCCCEEETTEEEECCTTT-------EEEEEETTTCCEEEEEECCC-----------CCCC
T ss_pred CCcEEEEEeC-CCCceeecCCCCcEEECCEEEEEcCCC-------EEEEEECCCCcEEEEEecccCCCCcccccccccCC
Confidence 77 488654 2221 1111125667788877643332 7999998754 45433 223211000 00001
Q ss_pred EEEEECCeEEEEEecCCCceEEEEEEC---CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEE
Q 016891 255 FVGNFSGCLYFSCLCNYPQPVDIWVLM---GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWY 331 (381)
Q Consensus 255 ~L~~~~G~L~~~~~~~~~~~~~iW~l~---~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~y 331 (381)
.....+|.+++.... + .+..+..+ ..|... ++ .... .. .+++.|++. .....++.+
T Consensus 234 ~p~~~~~~v~~~~~~-g--~l~~~d~~tG~~~w~~~--~~----~~~~-~~--~~~~~l~~~---------~~~g~l~~~ 292 (376)
T 3q7m_A 234 TPVVVNGVVFALAYN-G--NLTALDLRSGQIMWKRE--LG----SVND-FI--VDGNRIYLV---------DQNDRVMAL 292 (376)
T ss_dssp CCEEETTEEEEECTT-S--CEEEEETTTCCEEEEEC--CC----CEEE-EE--EETTEEEEE---------ETTCCEEEE
T ss_pred CcEEECCEEEEEecC-c--EEEEEECCCCcEEeecc--CC----CCCC-ce--EECCEEEEE---------cCCCeEEEE
Confidence 122345666655422 2 33333333 345432 11 1111 22 234447777 345579999
Q ss_pred eCCCCce
Q 016891 332 DLQNQGA 338 (381)
Q Consensus 332 d~~t~~~ 338 (381)
|+++++.
T Consensus 293 d~~tG~~ 299 (376)
T 3q7m_A 293 TIDGGVT 299 (376)
T ss_dssp ETTTCCE
T ss_pred ECCCCcE
Confidence 9998876
No 63
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=87.05 E-value=15 Score=32.31 Aligned_cols=191 Identities=10% Similarity=0.118 Sum_probs=96.2
Q ss_pred EEEEeeCCCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCC-CCEEEEEEEEEeecCccceEEEEEEcCCCcEEE
Q 016891 111 LIAFKNDENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVN-DDYKVVRLVQLVIGNVGYTEIAVYSLRTNSWRR 189 (381)
Q Consensus 111 Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~-~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W~~ 189 (381)
+|+....+..+.|||..++....+..... + ......+.+.+.. +.+- +... . ...+.+|+..++.|..
T Consensus 25 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~-h--~~~v~~~~~~~~~~~~~l-~s~~---~----dg~v~iwd~~~~~~~~ 93 (379)
T 3jrp_A 25 RLATCSSDKTIKIFEVEGETHKLIDTLTG-H--EGPVWRVDWAHPKFGTIL-ASCS---Y----DGKVLIWKEENGRWSQ 93 (379)
T ss_dssp EEEEEETTSCEEEEEEETTEEEEEEEECC-C--SSCEEEEEECCGGGCSEE-EEEE---T----TSCEEEEEEETTEEEE
T ss_pred EEEEEECCCcEEEEecCCCcceeeeEecC-C--CCcEEEEEeCCCCCCCEE-EEec---c----CCEEEEEEcCCCceeE
Confidence 33333345567888876433333222211 1 1123345554432 3332 2221 1 1468888988888876
Q ss_pred cccCCCcceecCC-CcEEEC----CeeEEEEeeCCCCCCcCEEEEEECCCCee-eeecCCCCCCCCCceeEEEEEE----
Q 016891 190 IRVDFPYYILHGW-DGTFAD----GHVHWLVTNNPEDYIENLIIAFNLKSEEF-HEVPLPHLENRNDVLVMFVGNF---- 259 (381)
Q Consensus 190 ~~~~~p~~~~~~~-~~v~~n----G~lYwl~~~~~~~~~~~~i~~fD~~~e~~-~~i~~P~~~~~~~~~~~~L~~~---- 259 (381)
+. ..... ... ..+.++ |.+...+..+. .|..+|+.+..- ..+.+.... .....+.-.
T Consensus 94 ~~-~~~~~--~~~v~~~~~~~~~~~~~l~~~~~d~------~i~v~d~~~~~~~~~~~~~~~~----~~v~~~~~~~~~~ 160 (379)
T 3jrp_A 94 IA-VHAVH--SASVNSVQWAPHEYGPLLLVASSDG------KVSVVEFKENGTTSPIIIDAHA----IGVNSASWAPATI 160 (379)
T ss_dssp EE-EECCC--SSCEEEEEECCGGGCSEEEEEETTS------EEEEEECCTTSCCCEEEEECCT----TCEEEEEECCCC-
T ss_pred ee-eecCC--CcceEEEEeCCCCCCCEEEEecCCC------cEEEEecCCCCceeeEEecCCC----CceEEEEEcCccc
Confidence 65 22110 011 333333 44444443332 788999876522 111111111 011122222
Q ss_pred ----------CCeEEEEEecCCCceEEEEEEC---CceeEEEEecCCCCCeeEEEEEEeC---CCEEEEEecccCCcccc
Q 016891 260 ----------SGCLYFSCLCNYPQPVDIWVLM---GCWTKTFSFPRSVGDYVKALAYSKS---GGKVLVDKFEYGEDEDI 323 (381)
Q Consensus 260 ----------~G~L~~~~~~~~~~~~~iW~l~---~~W~~~~~i~~~~~~~~~~~~~~~~---g~~i~l~~~~~~~~~~~ 323 (381)
+|.+.++...++ .+.||.+. ..|.....+.... ....-+.+.++ +. +++.. .
T Consensus 161 ~~~~~~~~~~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~h~-~~v~~~~~sp~~~~~~-~l~s~--------~ 228 (379)
T 3jrp_A 161 EEDGEHNGTKESRKFVTGGADN--LVKIWKYNSDAQTYVLESTLEGHS-DWVRDVAWSPTVLLRS-YLASV--------S 228 (379)
T ss_dssp ---------CTTCEEEEEETTS--CEEEEEEETTTTEEEEEEEECCCS-SCEEEEEECCCCSSSE-EEEEE--------E
T ss_pred cccccccCCCCCCEEEEEeCCC--eEEEEEecCCCcceeeEEEEeccc-CcEeEEEECCCCCCCC-eEEEE--------e
Confidence 477777766665 79999987 4566666665211 23556677777 56 44442 3
Q ss_pred CCcEEEEEeCCCCc
Q 016891 324 NRWELFWYDLQNQG 337 (381)
Q Consensus 324 ~~~~l~~yd~~t~~ 337 (381)
.+..+.+||+++..
T Consensus 229 ~dg~i~iwd~~~~~ 242 (379)
T 3jrp_A 229 QDRTCIIWTQDNEQ 242 (379)
T ss_dssp TTSCEEEEEESSTT
T ss_pred CCCEEEEEeCCCCC
Confidence 45569999998864
No 64
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=86.21 E-value=20 Score=32.83 Aligned_cols=133 Identities=12% Similarity=0.058 Sum_probs=64.5
Q ss_pred eEEEEEEcCCCcEEEcccCCCcceecCCCcEEECCeeEEEEeeCCCCCCcCEEEEEECCCCeeee-ecCCCCCCCCCcee
Q 016891 175 TEIAVYSLRTNSWRRIRVDFPYYILHGWDGTFADGHVHWLVTNNPEDYIENLIIAFNLKSEEFHE-VPLPHLENRNDVLV 253 (381)
Q Consensus 175 ~~~~vyss~t~~W~~~~~~~p~~~~~~~~~v~~nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~-i~~P~~~~~~~~~~ 253 (381)
..+.+|+.+++.-...-....... ..+..+|.....+..+. .|..+|+.+.+-.. +.... ..
T Consensus 276 g~i~vwd~~~~~~~~~~~~~~~~v----~~~~~~~~~l~~g~~dg------~i~iwd~~~~~~~~~~~~h~-------~~ 338 (435)
T 1p22_A 276 RTIKVWNTSTCEFVRTLNGHKRGI----ACLQYRDRLVVSGSSDN------TIRLWDIECGACLRVLEGHE-------EL 338 (435)
T ss_dssp SEEEEEETTTCCEEEEEECCSSCE----EEEEEETTEEEEEETTS------CEEEEETTTCCEEEEECCCS-------SC
T ss_pred CeEEEEECCcCcEEEEEcCCCCcE----EEEEeCCCEEEEEeCCC------eEEEEECCCCCEEEEEeCCc-------Cc
Confidence 467788877653221110111101 34455666555554442 69999998764432 22111 12
Q ss_pred EEEEEECCeEEEEEecCCCceEEEEEEC--C------ceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCC
Q 016891 254 MFVGNFSGCLYFSCLCNYPQPVDIWVLM--G------CWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINR 325 (381)
Q Consensus 254 ~~L~~~~G~L~~~~~~~~~~~~~iW~l~--~------~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~ 325 (381)
+.-...+|...+....++ .+.||.++ . .......+....+ ...-+.+ ++..|+.. ..+
T Consensus 339 v~~~~~~~~~l~sg~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~-~v~~l~~--~~~~l~s~---------s~D 404 (435)
T 1p22_A 339 VRCIRFDNKRIVSGAYDG--KIKVWDLVAALDPRAPAGTLCLRTLVEHSG-RVFRLQF--DEFQIVSS---------SHD 404 (435)
T ss_dssp EEEEECCSSEEEEEETTS--CEEEEEHHHHTSTTSCTTTTEEEEECCCSS-CCCCEEE--CSSCEEEC---------CSS
T ss_pred EEEEEecCCEEEEEeCCC--cEEEEECCCCCCccccccchheeeccCCCC-CeEEEEe--CCCEEEEE---------eCC
Confidence 233334777766666665 79999987 1 1223444431111 1122222 66634444 456
Q ss_pred cEEEEEeCCCCce
Q 016891 326 WELFWYDLQNQGA 338 (381)
Q Consensus 326 ~~l~~yd~~t~~~ 338 (381)
..+.+||+.++..
T Consensus 405 g~i~iwd~~~~~~ 417 (435)
T 1p22_A 405 DTILIWDFLNDPA 417 (435)
T ss_dssp SEEEEEC------
T ss_pred CEEEEEECCCCCC
Confidence 6899999998876
No 65
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=85.69 E-value=19 Score=32.08 Aligned_cols=191 Identities=10% Similarity=0.031 Sum_probs=90.5
Q ss_pred eCCCcEEEEccCCcceeeCCCCC------C--CCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCCcE
Q 016891 116 NDENGIALWNPSTEEHLILPKFW------G--DLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTNSW 187 (381)
Q Consensus 116 ~~~~~~~V~NP~T~~~~~LP~~~------~--~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W 187 (381)
..+..+.|||..+++........ . ..........+.+.+..+.+-+.+- ....+.+|+..++.-
T Consensus 63 ~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~--------~d~~i~iwd~~~~~~ 134 (408)
T 4a11_B 63 GSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSS--------FDKTLKVWDTNTLQT 134 (408)
T ss_dssp ETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEE--------TTSEEEEEETTTTEE
T ss_pred cCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEe--------CCCeEEEeeCCCCcc
Confidence 34556778887766544322100 0 0001123445556654443322211 114688888887654
Q ss_pred EEcccCCCcceecCC-CcEEECCeeEEEEeeCCCCCCcCEEEEEECCCCeeee-ecCCCCCCCCCceeEEEEEE-CCe-E
Q 016891 188 RRIRVDFPYYILHGW-DGTFADGHVHWLVTNNPEDYIENLIIAFNLKSEEFHE-VPLPHLENRNDVLVMFVGNF-SGC-L 263 (381)
Q Consensus 188 ~~~~~~~p~~~~~~~-~~v~~nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~-i~~P~~~~~~~~~~~~L~~~-~G~-L 263 (381)
.... ..+....... ....-++.+...+..+. .|..+|+.+.+... +.... .....+... +|. +
T Consensus 135 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~v~~~d~~~~~~~~~~~~~~------~~v~~~~~~~~~~~l 201 (408)
T 4a11_B 135 ADVF-NFEETVYSHHMSPVSTKHCLVAVGTRGP------KVQLCDLKSGSCSHILQGHR------QEILAVSWSPRYDYI 201 (408)
T ss_dssp EEEE-ECSSCEEEEEECSSCSSCCEEEEEESSS------SEEEEESSSSCCCEEECCCC------SCEEEEEECSSCTTE
T ss_pred ceec-cCCCceeeeEeecCCCCCcEEEEEcCCC------eEEEEeCCCcceeeeecCCC------CcEEEEEECCCCCcE
Confidence 3332 1111110000 11111333333333332 68899988654322 22111 112233333 454 5
Q ss_pred EEEEecCCCceEEEEEECCceeEEEEec--------------CCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEE
Q 016891 264 YFSCLCNYPQPVDIWVLMGCWTKTFSFP--------------RSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELF 329 (381)
Q Consensus 264 ~~~~~~~~~~~~~iW~l~~~W~~~~~i~--------------~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~ 329 (381)
.+....++ .+.+|.+...=.....+. ........-+.+.++|..|+.. ..+..+.
T Consensus 202 l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~---------~~dg~i~ 270 (408)
T 4a11_B 202 LATASADS--RVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTV---------GTDNRMR 270 (408)
T ss_dssp EEEEETTS--CEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEE---------ETTSCEE
T ss_pred EEEEcCCC--cEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEe---------cCCCeEE
Confidence 55555555 799999871111112221 0011345567777788855555 3556799
Q ss_pred EEeCCCCce
Q 016891 330 WYDLQNQGA 338 (381)
Q Consensus 330 ~yd~~t~~~ 338 (381)
+||+++++.
T Consensus 271 vwd~~~~~~ 279 (408)
T 4a11_B 271 LWNSSNGEN 279 (408)
T ss_dssp EEETTTCCB
T ss_pred EEECCCCcc
Confidence 999998765
No 66
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=84.83 E-value=23 Score=32.27 Aligned_cols=211 Identities=10% Similarity=-0.029 Sum_probs=103.5
Q ss_pred cccCcEEEEee-CCCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCC
Q 016891 106 DSCNGLIAFKN-DENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRT 184 (381)
Q Consensus 106 ~s~~GLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t 184 (381)
+..+|.|.+.+ ....++.+++.++....+-...... ..++.+|+..+. ++..- . ....+++++...
T Consensus 124 d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~-----p~glavd~~~g~--lY~~d----~--~~~~I~~~~~dg 190 (386)
T 3v65_B 124 HHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLES-----PGGLAVDWVHDK--LYWTD----S--GTSRIEVANLDG 190 (386)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSC-----CCCEEEETTTTE--EEEEE----T--TTTEEEECBTTS
T ss_pred ecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCC-----ccEEEEEeCCCe--EEEEc----C--CCCeEEEEeCCC
Confidence 34577777666 4567888888877654443222111 124555655442 22221 0 113555666554
Q ss_pred CcEEEcccCCCcceecCCCcEEE---CCeeEEEEeeCCCCCCcCEEEEEECCCCeeeeecCCCCCCCCCceeEEEEE--E
Q 016891 185 NSWRRIRVDFPYYILHGWDGTFA---DGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEVPLPHLENRNDVLVMFVGN--F 259 (381)
Q Consensus 185 ~~W~~~~~~~p~~~~~~~~~v~~---nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~--~ 259 (381)
..-+.+. ... .... .++.+ +|.|||...... ..|..+|+....-..+-. .... ..-.|+. .
T Consensus 191 ~~~~~l~-~~~--l~~P-~giavdp~~g~ly~td~~~~-----~~I~r~~~dG~~~~~~~~-~~~~----~PnGlavd~~ 256 (386)
T 3v65_B 191 AHRKVLL-WQS--LEKP-RAIALHPMEGTIYWTDWGNT-----PRIEASSMDGSGRRIIAD-THLF----WPNGLTIDYA 256 (386)
T ss_dssp CSCEEEE-CSS--CSCE-EEEEEETTTTEEEEEECSSS-----CEEEEEETTSCSCEEEEC-SSCS----CEEEEEEEGG
T ss_pred CceEEee-cCC--CCCC-cEEEEEcCCCeEEEeccCCC-----CEEEEEeCCCCCcEEEEE-CCCC----CeeeEEEeCC
Confidence 3322222 101 1001 44444 589999875431 279999998654433311 1111 1123443 4
Q ss_pred CCeEEEEEecCCCceEEEEEEC--CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCc
Q 016891 260 SGCLYFSCLCNYPQPVDIWVLM--GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQG 337 (381)
Q Consensus 260 ~G~L~~~~~~~~~~~~~iW~l~--~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~ 337 (381)
+|+||++..... . |+..+ ..-.+ ..+... ...|.++.-.++.||+.. .....|..+|..+++
T Consensus 257 ~~~lY~aD~~~~--~--I~~~d~dG~~~~-~~~~~~---~~~P~giav~~~~ly~td--------~~~~~V~~~~~~~G~ 320 (386)
T 3v65_B 257 GRRMYWVDAKHH--V--IERANLDGSHRK-AVISQG---LPHPFAITVFEDSLYWTD--------WHTKSINSANKFTGK 320 (386)
T ss_dssp GTEEEEEETTTT--E--EEEECTTSCSCE-EEECSS---CSSEEEEEEETTEEEEEE--------TTTTEEEEEETTTCC
T ss_pred CCEEEEEECCCC--E--EEEEeCCCCeeE-EEEECC---CCCceEEEEECCEEEEee--------CCCCeEEEEECCCCc
Confidence 789999876543 3 55555 22111 112211 224544444445588883 345679999955544
Q ss_pred eeeeeEEEecCCCCceeEEEEeece
Q 016891 338 AAADQVTIHGVPQGCRDTIVCVDSL 362 (381)
Q Consensus 338 ~~~~~v~~~~~~~~~~~~~~y~~sl 362 (381)
.- +.|. .+.... ..+.+|.+..
T Consensus 321 ~~-~~i~-~~~~~p-~gi~v~~~~~ 342 (386)
T 3v65_B 321 NQ-EIIR-NKLHFP-MDIHTLHPQR 342 (386)
T ss_dssp SC-EEEE-CSCSCC-CCEEEESGGG
T ss_pred ce-EEEc-cCCCCC-ceEEEEchhc
Confidence 40 4443 222222 3455665544
No 67
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=84.71 E-value=20 Score=31.36 Aligned_cols=200 Identities=10% Similarity=-0.035 Sum_probs=100.4
Q ss_pred EcccCcEEEEee-CCCcEEEEccCCcceee-CCCCCCCCC---CceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEE
Q 016891 105 IDSCNGLIAFKN-DENGIALWNPSTEEHLI-LPKFWGDLK---DFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAV 179 (381)
Q Consensus 105 ~~s~~GLl~~~~-~~~~~~V~NP~T~~~~~-LP~~~~~~~---~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~v 179 (381)
+...+..+.+.. ....+.++|+.|++... ++....... .......+.+++..+ + ++.... . ....+.+
T Consensus 96 ~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-~-l~~~~~--~---~~~~i~~ 168 (353)
T 3vgz_A 96 INNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATN-T-VYISGI--G---KESVIWV 168 (353)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTT-E-EEEEEE--S---SSCEEEE
T ss_pred ECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCC-E-EEEEec--C---CCceEEE
Confidence 334445454444 45789999999988643 332211110 011234566666544 2 222211 0 1256888
Q ss_pred EEcCCCcEEEcccCCCcceecCCCcEEE--CCeeEEEEeeCCCCCCcCEEEEEECCCCeee-eecCCCCCCCCCceeEEE
Q 016891 180 YSLRTNSWRRIRVDFPYYILHGWDGTFA--DGHVHWLVTNNPEDYIENLIIAFNLKSEEFH-EVPLPHLENRNDVLVMFV 256 (381)
Q Consensus 180 yss~t~~W~~~~~~~p~~~~~~~~~v~~--nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~-~i~~P~~~~~~~~~~~~L 256 (381)
++.+++.=...- +...... .++.+ +|...+....+ ..|..+|+.+.+.. .+..+..... .....+
T Consensus 169 ~d~~~~~~~~~~---~~~~~~~-~~~~~s~dg~~l~~~~~~------~~i~~~d~~~~~~~~~~~~~~~~~~--~~~~~~ 236 (353)
T 3vgz_A 169 VDGGNIKLKTAI---QNTGKMS-TGLALDSEGKRLYTTNAD------GELITIDTADNKILSRKKLLDDGKE--HFFINI 236 (353)
T ss_dssp EETTTTEEEEEE---CCCCTTC-CCCEEETTTTEEEEECTT------SEEEEEETTTTEEEEEEECCCSSSC--CCEEEE
T ss_pred EcCCCCceEEEe---cCCCCcc-ceEEECCCCCEEEEEcCC------CeEEEEECCCCeEEEEEEcCCCCCC--cccceE
Confidence 888776432211 1000000 22222 55533333322 27889999887654 3344322111 112223
Q ss_pred EEE-CCe-EEEEEecCCCceEEEEEEC-CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeC
Q 016891 257 GNF-SGC-LYFSCLCNYPQPVDIWVLM-GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDL 333 (381)
Q Consensus 257 ~~~-~G~-L~~~~~~~~~~~~~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~ 333 (381)
... +|+ |++...... .+.+|.++ .+-.....++. ..-+.+.++|+.+++.. .....+.+||+
T Consensus 237 ~~s~dg~~l~~~~~~~~--~v~~~d~~~~~~~~~~~~~~-----~~~~~~s~dg~~l~v~~--------~~~~~v~~~d~ 301 (353)
T 3vgz_A 237 SLDTARQRAFITDSKAA--EVLVVDTRNGNILAKVAAPE-----SLAVLFNPARNEAYVTH--------RQAGKVSVIDA 301 (353)
T ss_dssp EEETTTTEEEEEESSSS--EEEEEETTTCCEEEEEECSS-----CCCEEEETTTTEEEEEE--------TTTTEEEEEET
T ss_pred EECCCCCEEEEEeCCCC--EEEEEECCCCcEEEEEEcCC-----CceEEECCCCCEEEEEE--------CCCCeEEEEEC
Confidence 333 454 555543323 77777776 44333333331 12366778888677773 34568999999
Q ss_pred CCCce
Q 016891 334 QNQGA 338 (381)
Q Consensus 334 ~t~~~ 338 (381)
++++.
T Consensus 302 ~~~~~ 306 (353)
T 3vgz_A 302 KSYKV 306 (353)
T ss_dssp TTTEE
T ss_pred CCCeE
Confidence 99887
No 68
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=84.67 E-value=17 Score=30.52 Aligned_cols=190 Identities=13% Similarity=0.055 Sum_probs=98.1
Q ss_pred ccCcEEEEeeCCCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCCc
Q 016891 107 SCNGLIAFKNDENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTNS 186 (381)
Q Consensus 107 s~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~ 186 (381)
..+|-|.+......++++||.++....++.... ....++.+|+. +. ++.. . . ....+.+|+.++..
T Consensus 75 ~~~g~l~v~~~~~~i~~~d~~~~~~~~~~~~~~-----~~p~~i~~~~~-g~--l~v~-~---~--~~~~i~~~~~~~~~ 140 (270)
T 1rwi_B 75 DGAGTVYVTDFNNRVVTLAAGSNNQTVLPFDGL-----NYPEGLAVDTQ-GA--VYVA-D---R--GNNRVVKLAAGSKT 140 (270)
T ss_dssp CTTCCEEEEETTTEEEEECTTCSCCEECCCCSC-----SSEEEEEECTT-CC--EEEE-E---G--GGTEEEEECTTCCS
T ss_pred CCCCCEEEEcCCCEEEEEeCCCceEeeeecCCc-----CCCcceEECCC-CC--EEEE-E---C--CCCEEEEEECCCce
Confidence 345656555546679999998887666653221 12335556653 22 2222 1 0 11356666555544
Q ss_pred EEEcccCCCcceecCCCcEEE--CCeeEEEEeeCCCCCCcCEEEEEECCCCeeeeecCCCCCCCCCceeEEEEEE-CCeE
Q 016891 187 WRRIRVDFPYYILHGWDGTFA--DGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEVPLPHLENRNDVLVMFVGNF-SGCL 263 (381)
Q Consensus 187 W~~~~~~~p~~~~~~~~~v~~--nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~-~G~L 263 (381)
..... ... .. ...++.+ +|.+|+...... .|..||..+.......... . . ....++.. +|.|
T Consensus 141 ~~~~~-~~~--~~-~p~~i~~~~~g~l~v~~~~~~------~i~~~~~~~~~~~~~~~~~-~-~---~p~~i~~d~~g~l 205 (270)
T 1rwi_B 141 QTVLP-FTG--LN-DPDGVAVDNSGNVYVTDTDNN------RVVKLEAESNNQVVLPFTD-I-T---APWGIAVDEAGTV 205 (270)
T ss_dssp CEECC-CCS--CC-SCCCEEECTTCCEEEEEGGGT------EEEEECTTTCCEEECCCSS-C-C---SEEEEEECTTCCE
T ss_pred eEeec-ccc--CC-CceeEEEeCCCCEEEEECCCC------EEEEEecCCCceEeecccC-C-C---CceEEEECCCCCE
Confidence 33222 100 00 1144554 588877665432 7999999876554332211 1 1 12234443 5788
Q ss_pred EEEEecCCCceEEEEEECCceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCce
Q 016891 264 YFSCLCNYPQPVDIWVLMGCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGA 338 (381)
Q Consensus 264 ~~~~~~~~~~~~~iW~l~~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~ 338 (381)
++...... .+.+|..+..-.. .+...-.....-+++.++|. |++.. .....|..|++...+.
T Consensus 206 ~v~~~~~~--~v~~~~~~~~~~~--~~~~~~~~~p~~i~~~~~g~-l~v~~--------~~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 206 YVTEHNTN--QVVKLLAGSTTST--VLPFTGLNTPLAVAVDSDRT-VYVAD--------RGNDRVVKLTSLEHHH 267 (270)
T ss_dssp EEEETTTS--CEEEECTTCSCCE--ECCCCSCSCEEEEEECTTCC-EEEEE--------GGGTEEEEECCCGGGS
T ss_pred EEEECCCC--cEEEEcCCCCcce--eeccCCCCCceeEEECCCCC-EEEEE--------CCCCEEEEEcCCCccc
Confidence 88776544 4555544422111 12210002344566666787 88773 3456799999887664
No 69
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=84.48 E-value=21 Score=31.44 Aligned_cols=190 Identities=13% Similarity=0.173 Sum_probs=94.0
Q ss_pred EEEeeCCCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCCcEEEcc
Q 016891 112 IAFKNDENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTNSWRRIR 191 (381)
Q Consensus 112 l~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W~~~~ 191 (381)
|+.......+.|||..++++..+-.... + ......+.+.+. +.+-+ ... . ...+.+|+.+++.+....
T Consensus 23 l~~~~~d~~v~i~~~~~~~~~~~~~~~~-h--~~~v~~~~~~~~-~~~l~--~~~--~----dg~i~vwd~~~~~~~~~~ 90 (372)
T 1k8k_C 23 IAICPNNHEVHIYEKSGNKWVQVHELKE-H--NGQVTGVDWAPD-SNRIV--TCG--T----DRNAYVWTLKGRTWKPTL 90 (372)
T ss_dssp EEEECSSSEEEEEEEETTEEEEEEEEEC-C--SSCEEEEEEETT-TTEEE--EEE--T----TSCEEEEEEETTEEEEEE
T ss_pred EEEEeCCCEEEEEeCCCCcEEeeeeecC-C--CCcccEEEEeCC-CCEEE--EEc--C----CCeEEEEECCCCeeeeeE
Confidence 3333356678889988885332222211 1 112345556653 33322 211 1 145788888888776543
Q ss_pred cCCCcceecCCCcEEE--CCeeEEEEeeCCCCCCcCEEEEEECCCCe-e---eeecCCCCCCCCCceeEEEEEE-CCeEE
Q 016891 192 VDFPYYILHGWDGTFA--DGHVHWLVTNNPEDYIENLIIAFNLKSEE-F---HEVPLPHLENRNDVLVMFVGNF-SGCLY 264 (381)
Q Consensus 192 ~~~p~~~~~~~~~v~~--nG~lYwl~~~~~~~~~~~~i~~fD~~~e~-~---~~i~~P~~~~~~~~~~~~L~~~-~G~L~ 264 (381)
........ -..+.+ +|.....+..+. .|..+|+.+.. + ..+..+... ....+.-. +|.+.
T Consensus 91 ~~~~~~~~--v~~~~~~~~~~~l~~~~~d~------~v~i~d~~~~~~~~~~~~~~~~~~~-----~i~~~~~~~~~~~l 157 (372)
T 1k8k_C 91 VILRINRA--ARCVRWAPNEKKFAVGSGSR------VISICYFEQENDWWVCKHIKKPIRS-----TVLSLDWHPNSVLL 157 (372)
T ss_dssp ECCCCSSC--EEEEEECTTSSEEEEEETTS------SEEEEEEETTTTEEEEEEECTTCCS-----CEEEEEECTTSSEE
T ss_pred EeecCCCc--eeEEEECCCCCEEEEEeCCC------EEEEEEecCCCcceeeeeeecccCC-----CeeEEEEcCCCCEE
Confidence 11111000 022222 454444443332 57777766543 2 222222111 12233333 56666
Q ss_pred EEEecCCCceEEEEEEC----------Cce-------eEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcE
Q 016891 265 FSCLCNYPQPVDIWVLM----------GCW-------TKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWE 327 (381)
Q Consensus 265 ~~~~~~~~~~~~iW~l~----------~~W-------~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~ 327 (381)
+....++ .+.+|.+. ..| ..+..+.. ......-+.+.+++..|+.. ..+..
T Consensus 158 ~~~~~dg--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~---------~~d~~ 225 (372)
T 1k8k_C 158 AAGSCDF--KCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSS-SCGWVHGVCFSANGSRVAWV---------SHDST 225 (372)
T ss_dssp EEEETTS--CEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCC-CSSCEEEEEECSSSSEEEEE---------ETTTE
T ss_pred EEEcCCC--CEEEEEcccccccccccccccccccchhhheEecCC-CCCeEEEEEECCCCCEEEEE---------eCCCE
Confidence 6666555 79999864 112 22333321 11335566777788845544 45667
Q ss_pred EEEEeCCCCce
Q 016891 328 LFWYDLQNQGA 338 (381)
Q Consensus 328 l~~yd~~t~~~ 338 (381)
+.+||+++++.
T Consensus 226 i~i~d~~~~~~ 236 (372)
T 1k8k_C 226 VCLADADKKMA 236 (372)
T ss_dssp EEEEEGGGTTE
T ss_pred EEEEECCCCce
Confidence 99999988776
No 70
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=84.47 E-value=20 Score=31.31 Aligned_cols=67 Identities=7% Similarity=0.019 Sum_probs=43.1
Q ss_pred CCeEEEEEecCCCceEEEEEECCceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCce
Q 016891 260 SGCLYFSCLCNYPQPVDIWVLMGCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGA 338 (381)
Q Consensus 260 ~G~L~~~~~~~~~~~~~iW~l~~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~ 338 (381)
+|.+.++...++ .+.+|.++........+.. ......-+.+.+++..|+.. ..+..+.+||+++.+.
T Consensus 186 ~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~---------~~d~~i~v~d~~~~~~ 252 (369)
T 3zwl_B 186 KGKYIIAGHKDG--KISKYDVSNNYEYVDSIDL-HEKSISDMQFSPDLTYFITS---------SRDTNSFLVDVSTLQV 252 (369)
T ss_dssp GGCEEEEEETTS--EEEEEETTTTTEEEEEEEC-CSSCEEEEEECTTSSEEEEE---------ETTSEEEEEETTTCCE
T ss_pred CCCEEEEEcCCC--EEEEEECCCCcEeEEEEec-CCCceeEEEECCCCCEEEEe---------cCCceEEEEECCCCce
Confidence 566666655555 7999998843444444441 11235566777788855544 4566799999999877
No 71
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=83.99 E-value=21 Score=31.12 Aligned_cols=119 Identities=13% Similarity=0.155 Sum_probs=62.7
Q ss_pred CCeeEEEEeeCCCCCCcCEEEEEECCCCeeeeecCCCCCCCCCceeEEEEEE-CCeEEEEEecCCCceEEEEEEC--Cce
Q 016891 208 DGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEVPLPHLENRNDVLVMFVGNF-SGCLYFSCLCNYPQPVDIWVLM--GCW 284 (381)
Q Consensus 208 nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~-~G~L~~~~~~~~~~~~~iW~l~--~~W 284 (381)
+|.+||....+. .|..+|+.+.++..+..+... ....+... +|+|+++........-.|+.++ ...
T Consensus 55 ~g~l~~~~~~~~------~i~~~d~~~~~~~~~~~~~~~-----~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~ 123 (333)
T 2dg1_A 55 QGQLFLLDVFEG------NIFKINPETKEIKRPFVSHKA-----NPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDN 123 (333)
T ss_dssp TSCEEEEETTTC------EEEEECTTTCCEEEEEECSSS-----SEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCS
T ss_pred CCCEEEEECCCC------EEEEEeCCCCcEEEEeeCCCC-----CcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCE
Confidence 688888765442 799999998877665321111 12234443 6888887765410012344444 222
Q ss_pred eEEEEec-CCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCceeeeeE
Q 016891 285 TKTFSFP-RSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGAAADQV 343 (381)
Q Consensus 285 ~~~~~i~-~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~~~~~v 343 (381)
.. ..+. ...+....-+.+.++|. +++....- ........|+.+|++++++ +.+
T Consensus 124 ~~-~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~--~~~~~~~~l~~~~~~~~~~--~~~ 177 (333)
T 2dg1_A 124 LQ-DIIEDLSTAYCIDDMVFDSKGG-FYFTDFRG--YSTNPLGGVYYVSPDFRTV--TPI 177 (333)
T ss_dssp CE-EEECSSSSCCCEEEEEECTTSC-EEEEECCC--BTTBCCEEEEEECTTSCCE--EEE
T ss_pred EE-EEEccCccCCcccceEECCCCC-EEEEeccc--cccCCCceEEEEeCCCCEE--EEe
Confidence 21 1122 11223344566667777 77763100 0000135699999998877 654
No 72
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=83.97 E-value=38 Score=34.04 Aligned_cols=192 Identities=11% Similarity=0.053 Sum_probs=97.9
Q ss_pred CcEEEEeeCCCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCCcEE
Q 016891 109 NGLIAFKNDENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTNSWR 188 (381)
Q Consensus 109 ~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W~ 188 (381)
+|-|.+......++.+||.|+++..++.... . ......+..|.. + + +++.. ...+..|+..++.|+
T Consensus 417 ~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~--~-~~~v~~i~~d~~-g--~-lwigt-------~~Gl~~~~~~~~~~~ 482 (781)
T 3v9f_A 417 EGNLWFGTYLGNISYYNTRLKKFQIIELEKN--E-LLDVRVFYEDKN-K--K-IWIGT-------HAGVFVIDLASKKVI 482 (781)
T ss_dssp TSCEEEEETTEEEEEECSSSCEEEECCSTTT--C-CCCEEEEEECTT-S--E-EEEEE-------TTEEEEEESSSSSCC
T ss_pred CCCEEEEeccCCEEEEcCCCCcEEEeccCCC--C-CCeEEEEEECCC-C--C-EEEEE-------CCceEEEeCCCCeEE
Confidence 3444333333467777888887777653211 0 111223333321 1 1 23322 035778888888887
Q ss_pred EcccCCC-cceecCC-CcEEE--CCeeEEEEeeCCCCCCcCEEEEEECCCCeeeeecCCCCCCCCCceeEEEEE-ECCeE
Q 016891 189 RIRVDFP-YYILHGW-DGTFA--DGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEVPLPHLENRNDVLVMFVGN-FSGCL 263 (381)
Q Consensus 189 ~~~~~~p-~~~~~~~-~~v~~--nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~-~~G~L 263 (381)
... ..+ ....... .+++. +|.+ |++..+. .|..||..++++..+..+..... .....+.+ .+|.|
T Consensus 483 ~~~-~~~~~~~~~~~i~~i~~d~~g~l-Wigt~~~------Gl~~~~~~~~~~~~~~~~~~l~~--~~i~~i~~d~~g~l 552 (781)
T 3v9f_A 483 HHY-DTSNSQLLENFVRSIAQDSEGRF-WIGTFGG------GVGIYTPDMQLVRKFNQYEGFCS--NTINQIYRSSKGQM 552 (781)
T ss_dssp EEE-CTTTSSCSCSCEEEEEECTTCCE-EEEESSS------CEEEECTTCCEEEEECTTTTCSC--SCEEEEEECTTSCE
T ss_pred ecc-cCcccccccceeEEEEEcCCCCE-EEEEcCC------CEEEEeCCCCeEEEccCCCCCCC--CeeEEEEECCCCCE
Confidence 665 222 1111111 33333 4554 6665432 48899999999887754332211 12234444 36788
Q ss_pred EEEEecCCCceEEEEEEC---CceeEEEEec-CCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCcee
Q 016891 264 YFSCLCNYPQPVDIWVLM---GCWTKTFSFP-RSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGAA 339 (381)
Q Consensus 264 ~~~~~~~~~~~~~iW~l~---~~W~~~~~i~-~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~~ 339 (381)
.+... .+ + |..++ ..+... ... ..+.....-+....+|. |.+. . ...+..||++++++
T Consensus 553 Wi~T~-~G---l-v~~~d~~~~~~~~~-~~~~gl~~~~i~~i~~d~~g~-lW~~---------t-~~Gl~~~~~~~~~~- 614 (781)
T 3v9f_A 553 WLATG-EG---L-VCFPSARNFDYQVF-QRKEGLPNTHIRAISEDKNGN-IWAS---------T-NTGISCYITSKKCF- 614 (781)
T ss_dssp EEEET-TE---E-EEESCTTTCCCEEE-CGGGTCSCCCCCEEEECSSSC-EEEE---------C-SSCEEEEETTTTEE-
T ss_pred EEEEC-CC---c-eEEECCCCCcEEEc-cccCCCCCceEEEEEECCCCC-EEEE---------c-CCceEEEECCCCce-
Confidence 77665 22 2 13333 333322 212 11222233344444666 8887 3 34599999999998
Q ss_pred eeeE
Q 016891 340 ADQV 343 (381)
Q Consensus 340 ~~~v 343 (381)
+..
T Consensus 615 -~~~ 617 (781)
T 3v9f_A 615 -YTY 617 (781)
T ss_dssp -EEE
T ss_pred -EEe
Confidence 776
No 73
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=83.73 E-value=20 Score=30.71 Aligned_cols=197 Identities=10% Similarity=0.006 Sum_probs=101.8
Q ss_pred EEEEeeCCCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCCcEEEc
Q 016891 111 LIAFKNDENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTNSWRRI 190 (381)
Q Consensus 111 Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W~~~ 190 (381)
|+........++++||.++ ...+.... ....++.+++... ++.... +...+.+|+..++..+.+
T Consensus 42 l~~~~~~~~~i~~~~~~~~-~~~~~~~~------~~~~~l~~~~dg~---l~v~~~------~~~~i~~~d~~~g~~~~~ 105 (296)
T 3e5z_A 42 VIFSDVRQNRTWAWSDDGQ-LSPEMHPS------HHQNGHCLNKQGH---LIACSH------GLRRLERQREPGGEWESI 105 (296)
T ss_dssp EEEEEGGGTEEEEEETTSC-EEEEESSC------SSEEEEEECTTCC---EEEEET------TTTEEEEECSTTCCEEEE
T ss_pred EEEEeCCCCEEEEEECCCC-eEEEECCC------CCcceeeECCCCc---EEEEec------CCCeEEEEcCCCCcEEEE
Confidence 4555445668899999988 55544321 1133555565332 222211 114678888888887765
Q ss_pred ccCCCcceecCC-CcEEE--CCeeEEEEe---e-C-------CCCCCcCEEEEEECCCCeeeeecCCCCCCCCCceeEEE
Q 016891 191 RVDFPYYILHGW-DGTFA--DGHVHWLVT---N-N-------PEDYIENLIIAFNLKSEEFHEVPLPHLENRNDVLVMFV 256 (381)
Q Consensus 191 ~~~~p~~~~~~~-~~v~~--nG~lYwl~~---~-~-------~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~L 256 (381)
. .......... ..+.+ +|.+|+... . . ........|..+|.. .+...+.-... ..-.+
T Consensus 106 ~-~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~------~~~gi 177 (296)
T 3e5z_A 106 A-DSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRV------KPNGL 177 (296)
T ss_dssp E-CEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCS------SEEEE
T ss_pred e-eccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCC------CCccE
Confidence 4 1111111111 33443 588777531 1 0 000011278889887 55544421111 11123
Q ss_pred EEE-CCeEEEEEecCCCceEEEEEEC--Cce-eEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEe
Q 016891 257 GNF-SGCLYFSCLCNYPQPVDIWVLM--GCW-TKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYD 332 (381)
Q Consensus 257 ~~~-~G~L~~~~~~~~~~~~~iW~l~--~~W-~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd 332 (381)
+.. +|++. +...... .+.+|.++ ... .....+. .......-+++.++|. |++. . ...|..||
T Consensus 178 ~~s~dg~~l-v~~~~~~-~i~~~~~~~~g~~~~~~~~~~-~~~~~p~~i~~d~~G~-l~v~---------~-~~~v~~~~ 243 (296)
T 3e5z_A 178 AFLPSGNLL-VSDTGDN-ATHRYCLNARGETEYQGVHFT-VEPGKTDGLRVDAGGL-IWAS---------A-GDGVHVLT 243 (296)
T ss_dssp EECTTSCEE-EEETTTT-EEEEEEECSSSCEEEEEEEEC-CSSSCCCSEEEBTTSC-EEEE---------E-TTEEEEEC
T ss_pred EECCCCCEE-EEeCCCC-eEEEEEECCCCcCcCCCeEee-CCCCCCCeEEECCCCC-EEEE---------c-CCeEEEEC
Confidence 333 67666 4433332 77777775 444 2222222 1111223356667887 8888 4 56799999
Q ss_pred CCCCceeeeeEEEec
Q 016891 333 LQNQGAAADQVTIHG 347 (381)
Q Consensus 333 ~~t~~~~~~~v~~~~ 347 (381)
++++.+ +.+....
T Consensus 244 ~~g~~~--~~~~~~~ 256 (296)
T 3e5z_A 244 PDGDEL--GRVLTPQ 256 (296)
T ss_dssp TTSCEE--EEEECSS
T ss_pred CCCCEE--EEEECCC
Confidence 998887 7775543
No 74
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=83.66 E-value=21 Score=30.89 Aligned_cols=148 Identities=9% Similarity=0.042 Sum_probs=76.6
Q ss_pred eEEEEEEcCC-CcEEEcc--c-CCCcceecCCCcEEE--CCe-eEEEEeeCCCCCCcCEEEEEECC--CCeeee---e-c
Q 016891 175 TEIAVYSLRT-NSWRRIR--V-DFPYYILHGWDGTFA--DGH-VHWLVTNNPEDYIENLIIAFNLK--SEEFHE---V-P 241 (381)
Q Consensus 175 ~~~~vyss~t-~~W~~~~--~-~~p~~~~~~~~~v~~--nG~-lYwl~~~~~~~~~~~~i~~fD~~--~e~~~~---i-~ 241 (381)
..+.+|+..+ +....+. . ..+... ....+.+ +|. +|...... ..|..+|+. +.++.. + .
T Consensus 151 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~pdg~~l~~~~~~~------~~i~~~~~~~~~g~~~~~~~~~~ 222 (343)
T 1ri6_A 151 DRICLFTVSDDGHLVAQDPAEVTTVEGA--GPRHMVFHPNEQYAYCVNELN------SSVDVWELKDPHGNIECVQTLDM 222 (343)
T ss_dssp TEEEEEEECTTSCEEEEEEEEEECSTTC--CEEEEEECTTSSEEEEEETTT------TEEEEEESSCTTSCCEEEEEEEC
T ss_pred CEEEEEEecCCCceeeecccccccCCCC--CcceEEECCCCCEEEEEeCCC------CEEEEEEecCCCCcEEEEeeccc
Confidence 4577888876 6665322 0 111100 0022333 455 55544333 278889984 344332 2 2
Q ss_pred CCCCCCCCCceeEEEEEE-CCeEEEEEecCCCceEEEEEEC---CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEeccc
Q 016891 242 LPHLENRNDVLVMFVGNF-SGCLYFSCLCNYPQPVDIWVLM---GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEY 317 (381)
Q Consensus 242 ~P~~~~~~~~~~~~L~~~-~G~L~~~~~~~~~~~~~iW~l~---~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~ 317 (381)
.|...... .....+... +|+..++...... .+.+|.++ ..+..+..++.. ....-+++.++|..|++..
T Consensus 223 ~~~~~~~~-~~~~~i~~s~dg~~l~v~~~~~~-~i~v~d~~~~~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~--- 295 (343)
T 1ri6_A 223 MPENFSDT-RWAADIHITPDGRHLYACDRTAS-LITVFSVSEDGSVLSKEGFQPTE--TQPRGFNVDHSGKYLIAAG--- 295 (343)
T ss_dssp SCTTCCSC-CCEEEEEECTTSSEEEEEETTTT-EEEEEEECTTSCCEEEEEEEECS--SSCCCEEECTTSSEEEEEC---
T ss_pred cCcccccc-CCccceEECCCCCEEEEEecCCC-EEEEEEEcCCCCceEEeeeecCC--CccceEEECCCCCEEEEec---
Confidence 44331110 112233333 4654444433332 89999998 457766666521 1244567778888666662
Q ss_pred CCccccCCcEEEEE--eCCCCceeeeeEE
Q 016891 318 GEDEDINRWELFWY--DLQNQGAAADQVT 344 (381)
Q Consensus 318 ~~~~~~~~~~l~~y--d~~t~~~~~~~v~ 344 (381)
.....+.+| |.+++++ +.+.
T Consensus 296 -----~~~~~v~v~~~d~~~g~~--~~~~ 317 (343)
T 1ri6_A 296 -----QKSHHISVYEIVGEQGLL--HEKG 317 (343)
T ss_dssp -----TTTCEEEEEEEETTTTEE--EEEE
T ss_pred -----CCCCeEEEEEEcCCCcee--eEcc
Confidence 234566666 8888888 7774
No 75
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=83.16 E-value=19 Score=30.11 Aligned_cols=208 Identities=10% Similarity=-0.062 Sum_probs=99.2
Q ss_pred cCcEEEEeeCCCcEEEEccCC-cceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCCc
Q 016891 108 CNGLIAFKNDENGIALWNPST-EEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTNS 186 (381)
Q Consensus 108 ~~GLl~~~~~~~~~~V~NP~T-~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~ 186 (381)
-+|-.++......++++|..+ ++...+....... ....+.+.+. +.+ ++... ....+...+++++..++.
T Consensus 51 pdg~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~----~~~~~~~spd-g~~-l~~~~---~~~~~~~~l~~~~~~~~~ 121 (297)
T 2ojh_A 51 PDGKYLLLNSEGLLYRLSLAGDPSPEKVDTGFATI----CNNDHGISPD-GAL-YAISD---KVEFGKSAIYLLPSTGGT 121 (297)
T ss_dssp TTSSEEEEEETTEEEEEESSSCCSCEECCCTTCCC----BCSCCEECTT-SSE-EEEEE---CTTTSSCEEEEEETTCCC
T ss_pred CCCCEEEEEcCCeEEEEeCCCCCCceEeccccccc----cccceEECCC-CCE-EEEEE---eCCCCcceEEEEECCCCc
Confidence 344433333456899999999 8877765432111 1112333332 222 22221 111123677778777776
Q ss_pred EEEcccCCCcceecCCCcEEE--CCe-eEEEEeeCCCCCCcCEEEEEECCCCeeeeecCCCCCCCCCceeEEEEEE-CCe
Q 016891 187 WRRIRVDFPYYILHGWDGTFA--DGH-VHWLVTNNPEDYIENLIIAFNLKSEEFHEVPLPHLENRNDVLVMFVGNF-SGC 262 (381)
Q Consensus 187 W~~~~~~~p~~~~~~~~~v~~--nG~-lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~-~G~ 262 (381)
-+.+. .... . ..+.+ +|. +++....+. ...|..+|+.+.....+..... ....+.-. +|+
T Consensus 122 ~~~~~-~~~~-~----~~~~~spdg~~l~~~~~~~~----~~~l~~~~~~~~~~~~~~~~~~------~~~~~~~s~dg~ 185 (297)
T 2ojh_A 122 PRLMT-KNLP-S----YWHGWSPDGKSFTYCGIRDQ----VFDIYSMDIDSGVETRLTHGEG------RNDGPDYSPDGR 185 (297)
T ss_dssp CEECC-SSSS-E----EEEEECTTSSEEEEEEEETT----EEEEEEEETTTCCEEECCCSSS------CEEEEEECTTSS
T ss_pred eEEee-cCCC-c----cceEECCCCCEEEEEECCCC----ceEEEEEECCCCcceEcccCCC------ccccceECCCCC
Confidence 55554 2111 1 11122 454 444443332 1256666677665554422111 12223333 666
Q ss_pred EEEEEecCCCceEEEEEECCceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccc--cCCcEEEEEeCCCCceee
Q 016891 263 LYFSCLCNYPQPVDIWVLMGCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDED--INRWELFWYDLQNQGAAA 340 (381)
Q Consensus 263 L~~~~~~~~~~~~~iW~l~~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~--~~~~~l~~yd~~t~~~~~ 340 (381)
..++...... .+.||.++..-.....+.. .......+.+.++|+.|++....-+.... .....|+.||+++++.
T Consensus 186 ~l~~~~~~~~-~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~-- 261 (297)
T 2ojh_A 186 WIYFNSSRTG-QMQIWRVRVDGSSVERITD-SAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNV-- 261 (297)
T ss_dssp EEEEEECTTS-SCEEEEEETTSSCEEECCC-CSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSC--
T ss_pred EEEEEecCCC-CccEEEECCCCCCcEEEec-CCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCc--
Confidence 5444443222 6889998711122233331 11234446667888866666310000000 0124699999999988
Q ss_pred eeEE
Q 016891 341 DQVT 344 (381)
Q Consensus 341 ~~v~ 344 (381)
+.+.
T Consensus 262 ~~~~ 265 (297)
T 2ojh_A 262 ETLF 265 (297)
T ss_dssp EEEE
T ss_pred eeee
Confidence 7663
No 76
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=82.54 E-value=25 Score=30.91 Aligned_cols=214 Identities=10% Similarity=0.032 Sum_probs=102.7
Q ss_pred EcccCcEEEEee-CCCcEEEEccCC----cceee-CCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEE
Q 016891 105 IDSCNGLIAFKN-DENGIALWNPST----EEHLI-LPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIA 178 (381)
Q Consensus 105 ~~s~~GLl~~~~-~~~~~~V~NP~T----~~~~~-LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~ 178 (381)
.+..+|.|...+ ....++.+++.+ ..... ++. .... ..++.+|...+. +...-. ....++
T Consensus 37 ~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~-~~~~-----p~glavd~~~~~--ly~~d~------~~~~I~ 102 (316)
T 1ijq_A 37 TEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR-DIQA-----PDGLAVDWIHSN--IYWTDS------VLGTVS 102 (316)
T ss_dssp EETTTTEEEEEETTTTEEEEEEC--------CEEEECS-SCSC-----CCEEEEETTTTE--EEEEET------TTTEEE
T ss_pred EEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeC-CCCC-----cCEEEEeecCCe--EEEEEC------CCCEEE
Confidence 334567776665 456788888876 22222 221 1111 124555654442 222210 124566
Q ss_pred EEEcCCCcEEEcccCCCcceecCCCcEEE---CCeeEEEEeeCCCCCCcCEEEEEECCCCeeeee-cCCCCCCCCCceeE
Q 016891 179 VYSLRTNSWRRIRVDFPYYILHGWDGTFA---DGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEV-PLPHLENRNDVLVM 254 (381)
Q Consensus 179 vyss~t~~W~~~~~~~p~~~~~~~~~v~~---nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~~ 254 (381)
+++.....=+.+. .... ... .++.+ +|.+||...... ..|..+|+....-+.+ ... .. ..-
T Consensus 103 ~~~~~g~~~~~~~-~~~~--~~P-~~iavdp~~g~ly~~d~~~~-----~~I~~~~~dG~~~~~~~~~~--~~----~P~ 167 (316)
T 1ijq_A 103 VADTKGVKRKTLF-RENG--SKP-RAIVVDPVHGFMYWTDWGTP-----AKIKKGGLNGVDIYSLVTEN--IQ----WPN 167 (316)
T ss_dssp EEETTSSSEEEEE-ECTT--CCE-EEEEEETTTTEEEEEECSSS-----CEEEEEETTSCCEEEEECSS--CS----CEE
T ss_pred EEeCCCCceEEEE-ECCC--CCc-ceEEeCCCCCEEEEEccCCC-----CeEEEEcCCCCCeEEEEECC--CC----Cce
Confidence 7776654333222 1110 011 44444 689999875321 2799999876544433 211 11 122
Q ss_pred EEEEE--CCeEEEEEecCCCceEEEEEECCceeE-EEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEE
Q 016891 255 FVGNF--SGCLYFSCLCNYPQPVDIWVLMGCWTK-TFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWY 331 (381)
Q Consensus 255 ~L~~~--~G~L~~~~~~~~~~~~~iW~l~~~W~~-~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~y 331 (381)
.|+.. +|+||++..... ++....++..-.+ +..... ....|.++.-+++.||+.. ....+|..+
T Consensus 168 gla~d~~~~~lY~~D~~~~--~I~~~d~dg~~~~~~~~~~~---~~~~P~giav~~~~ly~~d--------~~~~~V~~~ 234 (316)
T 1ijq_A 168 GITLDLLSGRLYWVDSKLH--SISSIDVNGGNRKTILEDEK---RLAHPFSLAVFEDKVFWTD--------IINEAIFSA 234 (316)
T ss_dssp EEEEETTTTEEEEEETTTT--EEEEEETTSCSCEEEEECTT---TTSSEEEEEEETTEEEEEE--------TTTTEEEEE
T ss_pred EEEEeccCCEEEEEECCCC--eEEEEecCCCceEEEeecCC---ccCCcEEEEEECCEEEEEE--------CCCCeEEEE
Confidence 34443 678988876544 5544444422222 212111 1224444444455588883 345689999
Q ss_pred eCCCCceeeeeEEEecCCCCceeEEEEeecee
Q 016891 332 DLQNQGAAADQVTIHGVPQGCRDTIVCVDSLV 363 (381)
Q Consensus 332 d~~t~~~~~~~v~~~~~~~~~~~~~~y~~sl~ 363 (381)
|+.+++.- +.+. .+.... ..+.+|.++..
T Consensus 235 ~~~~g~~~-~~i~-~~~~~p-~~i~v~~~~~q 263 (316)
T 1ijq_A 235 NRLTGSDV-NLLA-ENLLSP-EDMVLFHNLTQ 263 (316)
T ss_dssp ETTTCCCC-EEEE-CSCSCC-CCEEEESGGGS
T ss_pred eCCCCcce-EEEe-cCCCCc-eEEEEeccccC
Confidence 99766640 4442 222222 34566655543
No 77
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=81.92 E-value=26 Score=30.74 Aligned_cols=200 Identities=14% Similarity=0.102 Sum_probs=94.1
Q ss_pred cCcEEEEee-CCCcEEEEccCCc--ceeeCCCCCC---CCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEE
Q 016891 108 CNGLIAFKN-DENGIALWNPSTE--EHLILPKFWG---DLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYS 181 (381)
Q Consensus 108 ~~GLl~~~~-~~~~~~V~NP~T~--~~~~LP~~~~---~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vys 181 (381)
.+|-|.+.+ ....+.++|+-.+ ....+..... .........++.+|+..+..-| . . ......+.+|+
T Consensus 100 ~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv--~-d----~~~~~~I~~~~ 172 (329)
T 3fvz_A 100 TDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFV--S-D----GYCNSRIVQFS 172 (329)
T ss_dssp TTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEE--E-E----CSSCCEEEEEC
T ss_pred CCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEE--E-e----CCCCCeEEEEc
Confidence 456555554 4567888998655 3333421110 0001112346667764443222 1 1 00125677777
Q ss_pred cCCCcEEEcccCCCc-----ceecCC-CcEEE--C-CeeEEEEeeCCCCCCcCEEEEEECCCCee-eeecCCCCCCCCCc
Q 016891 182 LRTNSWRRIRVDFPY-----YILHGW-DGTFA--D-GHVHWLVTNNPEDYIENLIIAFNLKSEEF-HEVPLPHLENRNDV 251 (381)
Q Consensus 182 s~t~~W~~~~~~~p~-----~~~~~~-~~v~~--n-G~lYwl~~~~~~~~~~~~i~~fD~~~e~~-~~i~~P~~~~~~~~ 251 (381)
.....-+.+. .... ...... .++.+ + |.+|+...... .|..||+.+.++ ..+..+.....
T Consensus 173 ~~g~~~~~~~-~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~------~I~~~~~~~G~~~~~~~~~~~~~~--- 242 (329)
T 3fvz_A 173 PSGKFVTQWG-EESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENG------RIQCFKTDTKEFVREIKHASFGRN--- 242 (329)
T ss_dssp TTSCEEEEEC-EECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTT------EEEEEETTTCCEEEEECCTTTTTC---
T ss_pred CCCCEEEEec-cCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCC------EEEEEECCCCcEEEEEeccccCCC---
Confidence 4433222222 1000 001111 55666 3 88988775542 899999985554 44444432211
Q ss_pred eeEEEEEECCeEEEEEecC-----CCceEEEEEEC-CceeEEEEecCCCC--CeeEEEEEEeCCCEEEEEecccCCcccc
Q 016891 252 LVMFVGNFSGCLYFSCLCN-----YPQPVDIWVLM-GCWTKTFSFPRSVG--DYVKALAYSKSGGKVLVDKFEYGEDEDI 323 (381)
Q Consensus 252 ~~~~L~~~~G~L~~~~~~~-----~~~~~~iW~l~-~~W~~~~~i~~~~~--~~~~~~~~~~~g~~i~l~~~~~~~~~~~ 323 (381)
...+....|.++...... ....+.+|.++ .+.. ..+....+ ....-+++.++|. |++.. .
T Consensus 243 -~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~--~~~~~~~~~~~~p~~ia~~~dG~-lyvad--------~ 310 (329)
T 3fvz_A 243 -VFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEII--DVFKPVRKHFDMPHDIVASEDGT-VYIGD--------A 310 (329)
T ss_dssp -EEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEE--EEECCSSSCCSSEEEEEECTTSE-EEEEE--------S
T ss_pred -cceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEE--EEEcCCCCccCCeeEEEECCCCC-EEEEE--------C
Confidence 112222234444443221 12256777766 4433 33331111 2345566667775 77773 3
Q ss_pred CCcEEEEEeCCCC
Q 016891 324 NRWELFWYDLQNQ 336 (381)
Q Consensus 324 ~~~~l~~yd~~t~ 336 (381)
....|..|+++.+
T Consensus 311 ~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 311 HTNTVWKFTLTEK 323 (329)
T ss_dssp SSCCEEEEEEEEC
T ss_pred CCCEEEEEeCCcc
Confidence 3445777776554
No 78
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=81.64 E-value=32 Score=31.51 Aligned_cols=187 Identities=10% Similarity=0.052 Sum_probs=96.4
Q ss_pred CcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCCcEEEcccCCCcce
Q 016891 119 NGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTNSWRRIRVDFPYYI 198 (381)
Q Consensus 119 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W~~~~~~~p~~~ 198 (381)
..+.++|..++..+.|.... .....+.+.|... +++.... +.+...+.+++.+++.-+.+. ..+...
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~------~~v~~~~~Spdg~--~la~~s~----~~~~~~i~~~d~~tg~~~~l~-~~~~~~ 225 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSP------QPLMSPAWSPDGS--KLAYVTF----ESGRSALVIQTLANGAVRQVA-SFPRHN 225 (415)
T ss_dssp EEEEEEETTSCSCEEEEEES------SCEEEEEECTTSS--EEEEEEC----TTSSCEEEEEETTTCCEEEEE-CCSSCE
T ss_pred ceEEEEcCCCCCCEEEeCCC------CcceeeEEcCCCC--EEEEEEe----cCCCcEEEEEECCCCcEEEee-cCCCcc
Confidence 57899998776655554221 1123344444332 2322221 112257899999998877665 322211
Q ss_pred ecCCCcEEE--CCe-eEEEEeeCCCCCCcCEEEEEECCCCeeeeecCCCCCCCCCceeEEEEEE-CCeEEEEEecCCCce
Q 016891 199 LHGWDGTFA--DGH-VHWLVTNNPEDYIENLIIAFNLKSEEFHEVPLPHLENRNDVLVMFVGNF-SGCLYFSCLCNYPQP 274 (381)
Q Consensus 199 ~~~~~~v~~--nG~-lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~-~G~L~~~~~~~~~~~ 274 (381)
..+.+ +|. |.+....+. ...|..+|+.+.+...+..... ....+.-. +|+..++...... .
T Consensus 226 ----~~~~~spdg~~la~~~~~~g----~~~i~~~d~~~~~~~~l~~~~~------~~~~~~~spdg~~l~~~s~~~g-~ 290 (415)
T 2hqs_A 226 ----GAPAFSPDGSKLAFALSKTG----SLNLYVMDLASGQIRQVTDGRS------NNTEPTWFPDSQNLAFTSDQAG-R 290 (415)
T ss_dssp ----EEEEECTTSSEEEEEECTTS----SCEEEEEETTTCCEEECCCCSS------CEEEEEECTTSSEEEEEECTTS-S
T ss_pred ----cCEEEcCCCCEEEEEEecCC----CceEEEEECCCCCEEeCcCCCC------cccceEECCCCCEEEEEECCCC-C
Confidence 12222 565 554443221 1268999998876654422111 12223333 6764444433222 4
Q ss_pred EEEEEEC-CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCceeeeeE
Q 016891 275 VDIWVLM-GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGAAADQV 343 (381)
Q Consensus 275 ~~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~~~~~v 343 (381)
..||.++ ..-. ...+.. .+....-+.+.++|+.|++... +.....++.+|+++++. +.+
T Consensus 291 ~~i~~~d~~~~~-~~~l~~-~~~~~~~~~~spdG~~l~~~~~------~~g~~~i~~~d~~~~~~--~~l 350 (415)
T 2hqs_A 291 PQVYKVNINGGA-PQRITW-EGSQNQDADVSSDGKFMVMVSS------NGGQQHIAKQDLATGGV--QVL 350 (415)
T ss_dssp CEEEEEETTSSC-CEECCC-SSSEEEEEEECTTSSEEEEEEE------CSSCEEEEEEETTTCCE--EEC
T ss_pred cEEEEEECCCCC-EEEEec-CCCcccCeEECCCCCEEEEEEC------cCCceEEEEEECCCCCE--EEe
Confidence 5666666 2211 122321 1123445667789997776631 01135799999999988 766
No 79
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=81.25 E-value=28 Score=30.57 Aligned_cols=136 Identities=10% Similarity=0.113 Sum_probs=75.9
Q ss_pred eEEEEEEcCCCcEEEcccCCCcceecCC-CcEEE--CCeeEEEEeeCCCCCCcCEEEEEECCCCeeeee-cCCCCCCCCC
Q 016891 175 TEIAVYSLRTNSWRRIRVDFPYYILHGW-DGTFA--DGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEV-PLPHLENRND 250 (381)
Q Consensus 175 ~~~~vyss~t~~W~~~~~~~p~~~~~~~-~~v~~--nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~ 250 (381)
..+.+|+..++.|+.+. .+.. .... ..+.+ +|.+...+..+. .|..+|+.+.++... ......
T Consensus 30 ~~v~i~~~~~~~~~~~~-~~~~--h~~~v~~~~~~~~~~~l~~~~~dg------~i~vwd~~~~~~~~~~~~~~~~---- 96 (372)
T 1k8k_C 30 HEVHIYEKSGNKWVQVH-ELKE--HNGQVTGVDWAPDSNRIVTCGTDR------NAYVWTLKGRTWKPTLVILRIN---- 96 (372)
T ss_dssp SEEEEEEEETTEEEEEE-EEEC--CSSCEEEEEEETTTTEEEEEETTS------CEEEEEEETTEEEEEEECCCCS----
T ss_pred CEEEEEeCCCCcEEeee-eecC--CCCcccEEEEeCCCCEEEEEcCCC------eEEEEECCCCeeeeeEEeecCC----
Confidence 56888888888776554 2210 0001 22222 455444444332 688999988776443 222111
Q ss_pred ceeEEEEEE-CCeEEEEEecCCCceEEEEEEC--CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcE
Q 016891 251 VLVMFVGNF-SGCLYFSCLCNYPQPVDIWVLM--GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWE 327 (381)
Q Consensus 251 ~~~~~L~~~-~G~L~~~~~~~~~~~~~iW~l~--~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~ 327 (381)
.....+.-. +|...++...++ .+.+|.++ ..|.....+.........-+.+.+++..++.. .....
T Consensus 97 ~~v~~~~~~~~~~~l~~~~~d~--~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~---------~~dg~ 165 (372)
T 1k8k_C 97 RAARCVRWAPNEKKFAVGSGSR--VISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAG---------SCDFK 165 (372)
T ss_dssp SCEEEEEECTTSSEEEEEETTS--SEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEE---------ETTSC
T ss_pred CceeEEEECCCCCEEEEEeCCC--EEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEE---------cCCCC
Confidence 112233333 566666666555 79999999 55665555542222345667777788844444 34567
Q ss_pred EEEEeCC
Q 016891 328 LFWYDLQ 334 (381)
Q Consensus 328 l~~yd~~ 334 (381)
+.+||++
T Consensus 166 i~~~d~~ 172 (372)
T 1k8k_C 166 CRIFSAY 172 (372)
T ss_dssp EEEEECC
T ss_pred EEEEEcc
Confidence 9999965
No 80
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=81.13 E-value=19 Score=33.53 Aligned_cols=69 Identities=13% Similarity=0.076 Sum_probs=48.5
Q ss_pred CCeEEEEEecCCC-----ceEEEEEEC-CceeEEEEecCCCCCeeEEEEEEeCCC-EEEEEecccCCccccCCcEEEEEe
Q 016891 260 SGCLYFSCLCNYP-----QPVDIWVLM-GCWTKTFSFPRSVGDYVKALAYSKSGG-KVLVDKFEYGEDEDINRWELFWYD 332 (381)
Q Consensus 260 ~G~L~~~~~~~~~-----~~~~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~-~i~l~~~~~~~~~~~~~~~l~~yd 332 (381)
+++||+....... ..-+||+++ ..+..+.+|+ .+....-+.+.++|+ ++|..+ .....|.++|
T Consensus 330 g~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~--vg~~P~gia~spDg~~~lyv~n--------~~s~~VsVID 399 (426)
T 3c75_H 330 SDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIE--LGHEIDSINVSQDAEPLLYALS--------AGTQTLHIYD 399 (426)
T ss_dssp GTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEE--EEEEECEEEECCSSSCEEEEEE--------TTTTEEEEEE
T ss_pred CCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEE--CCCCcCeEEEccCCCEEEEEEc--------CCCCeEEEEE
Confidence 4678887653210 135799999 8888888887 223344566678888 677773 3467899999
Q ss_pred CCCCce
Q 016891 333 LQNQGA 338 (381)
Q Consensus 333 ~~t~~~ 338 (381)
+.|.+.
T Consensus 400 ~~t~kv 405 (426)
T 3c75_H 400 AATGEE 405 (426)
T ss_dssp TTTCCE
T ss_pred CCCCCE
Confidence 999998
No 81
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=80.91 E-value=8.4 Score=33.73 Aligned_cols=119 Identities=11% Similarity=-0.060 Sum_probs=60.5
Q ss_pred ECCeeEEEEeeCCCCCCcCEEEEEECCCCeee-eecCCCCCCCCCceeEEEEEE-CCe-EEEEEecCCCceEEEEEEC-C
Q 016891 207 ADGHVHWLVTNNPEDYIENLIIAFNLKSEEFH-EVPLPHLENRNDVLVMFVGNF-SGC-LYFSCLCNYPQPVDIWVLM-G 282 (381)
Q Consensus 207 ~nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~-~i~~P~~~~~~~~~~~~L~~~-~G~-L~~~~~~~~~~~~~iW~l~-~ 282 (381)
.++.+|.....+. .|..+|+.+.+.. .++.+.... ...+... +|+ +++.. .... .+.+|.++ .
T Consensus 9 ~~~~~~v~~~~~~------~v~~~d~~~~~~~~~~~~~~~~~-----~~~~~~s~dg~~~~v~~-~~~~-~i~~~d~~t~ 75 (349)
T 1jmx_B 9 AGHEYMIVTNYPN------NLHVVDVASDTVYKSCVMPDKFG-----PGTAMMAPDNRTAYVLN-NHYG-DIYGIDLDTC 75 (349)
T ss_dssp TTCEEEEEEETTT------EEEEEETTTTEEEEEEECSSCCS-----SCEEEECTTSSEEEEEE-TTTT-EEEEEETTTT
T ss_pred CCCEEEEEeCCCC------eEEEEECCCCcEEEEEecCCCCC-----CceeEECCCCCEEEEEe-CCCC-cEEEEeCCCC
Confidence 3566666555442 7999999887653 345553111 1123333 565 44444 3332 77777776 4
Q ss_pred ceeEEEEecCCC---CCeeEEEEEEeCCCEEEEEecc--cCC-ccccCCcEEEEEeCCCCce
Q 016891 283 CWTKTFSFPRSV---GDYVKALAYSKSGGKVLVDKFE--YGE-DEDINRWELFWYDLQNQGA 338 (381)
Q Consensus 283 ~W~~~~~i~~~~---~~~~~~~~~~~~g~~i~l~~~~--~~~-~~~~~~~~l~~yd~~t~~~ 338 (381)
+-.....++... +....-+.+.++|+.|++.... ..- ........+.+||+++++.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~ 137 (349)
T 1jmx_B 76 KNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLE 137 (349)
T ss_dssp EEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGG
T ss_pred cEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccc
Confidence 333333332111 1112346677788867666310 000 0000135799999998553
No 82
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=80.74 E-value=31 Score=30.89 Aligned_cols=195 Identities=15% Similarity=0.140 Sum_probs=96.7
Q ss_pred EEEEeeCCCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCC--cEE
Q 016891 111 LIAFKNDENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTN--SWR 188 (381)
Q Consensus 111 Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~--~W~ 188 (381)
.|+....+..+.+||..+++....-..............+.+.+..+.+-+ ... . ...+.+|+.+.. .-+
T Consensus 172 ~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~--sgs--~----D~~v~~wd~~~~~~~~~ 243 (380)
T 3iz6_a 172 RLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFI--SGS--C----DTTVRLWDLRITSRAVR 243 (380)
T ss_dssp CEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEE--EEE--T----TSCEEEEETTTTCCCCE
T ss_pred EEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEE--EEE--C----CCeEEEEECCCCCcceE
Confidence 344444567899999999887653221111111123344555443333222 111 1 145778887632 112
Q ss_pred EcccCCCcceecCCCcEEE--CCeeEEEEeeCCCCCCcCEEEEEECCCCeeee-ecCCCCCCCCC-ceeEEEEE-ECCeE
Q 016891 189 RIRVDFPYYILHGWDGTFA--DGHVHWLVTNNPEDYIENLIIAFNLKSEEFHE-VPLPHLENRND-VLVMFVGN-FSGCL 263 (381)
Q Consensus 189 ~~~~~~p~~~~~~~~~v~~--nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~-i~~P~~~~~~~-~~~~~L~~-~~G~L 263 (381)
.+. ...... ..+.+ +|.....+..+. .|-.+|+.+..-.. +.......... .....+.- .+|++
T Consensus 244 ~~~-~h~~~v----~~v~~~p~~~~l~s~s~D~------~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~ 312 (380)
T 3iz6_a 244 TYH-GHEGDI----NSVKFFPDGQRFGTGSDDG------TCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRL 312 (380)
T ss_dssp EEC-CCSSCC----CEEEECTTSSEEEEECSSS------CEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSE
T ss_pred EEC-CcCCCe----EEEEEecCCCeEEEEcCCC------eEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCE
Confidence 111 100000 33333 455433333332 68999998865433 33222211100 11112332 36887
Q ss_pred EEEEecCCCceEEEEEEC-CceeEEEEec---CCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCc
Q 016891 264 YFSCLCNYPQPVDIWVLM-GCWTKTFSFP---RSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQG 337 (381)
Q Consensus 264 ~~~~~~~~~~~~~iW~l~-~~W~~~~~i~---~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~ 337 (381)
.++...++ .+.||.+. .+ ....+. ........-+++.++|. .++.+ ..+..+.+||+++.+
T Consensus 313 l~~g~~dg--~i~vwd~~~~~--~~~~~~~~~~~h~~~v~~l~~s~dg~-~l~sg--------s~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 313 LFAGYSNG--DCYVWDTLLAE--MVLNLGTLQNSHEGRISCLGLSSDGS-ALCTG--------SWDKNLKIWAFSGHR 377 (380)
T ss_dssp EEEECTTS--CEEEEETTTCC--EEEEECCSCSSCCCCCCEEEECSSSS-EEEEE--------CTTSCEEEEECCSSS
T ss_pred EEEEECCC--CEEEEECCCCc--eEEEEecccCCCCCceEEEEECCCCC-EEEEe--------eCCCCEEEEecCCCc
Confidence 77776665 79999877 33 223332 11123456677888998 45542 355679999988754
No 83
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=80.69 E-value=31 Score=30.74 Aligned_cols=186 Identities=10% Similarity=-0.001 Sum_probs=87.8
Q ss_pred cCcEEEEe-eCCCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCCc
Q 016891 108 CNGLIAFK-NDENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTNS 186 (381)
Q Consensus 108 ~~GLl~~~-~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~ 186 (381)
.+|-.++. ..+..+.|||..+++....-.. +. .....+.+.+....+-+ ... . ...+.+|+.+++.
T Consensus 149 pdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~---h~--~~v~~v~~s~~~~~~~~-s~~---~----dg~v~~wd~~~~~ 215 (357)
T 4g56_B 149 SDGTQAVSGGKDFSVKVWDLSQKAVLKSYNA---HS--SEVNCVAACPGKDTIFL-SCG---E----DGRILLWDTRKPK 215 (357)
T ss_dssp SSSSEEEEEETTSCEEEEETTTTEEEEEECC---CS--SCEEEEEECTTCSSCEE-EEE---T----TSCEEECCTTSSS
T ss_pred CCCCEEEEEeCCCeEEEEECCCCcEEEEEcC---CC--CCEEEEEEccCCCceee-eec---c----CCceEEEECCCCc
Confidence 35544443 3566789999988876543211 11 12333444444333222 111 1 1356777776653
Q ss_pred EEEcccCCCcceecCC-CcEEE---CCeeEEEEeeCCCCCCcCEEEEEECCCCeee-eecCCCCCCCCCceeEEEEEE-C
Q 016891 187 WRRIRVDFPYYILHGW-DGTFA---DGHVHWLVTNNPEDYIENLIIAFNLKSEEFH-EVPLPHLENRNDVLVMFVGNF-S 260 (381)
Q Consensus 187 W~~~~~~~p~~~~~~~-~~v~~---nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~-~i~~P~~~~~~~~~~~~L~~~-~ 260 (381)
-.... ........ .++.+ ++.+...+..+. .|..+|+.+.+-. .+..... ....+.-. +
T Consensus 216 ~~~~~---~~~~~~~~v~~v~~sp~~~~~la~g~~d~------~i~~wd~~~~~~~~~~~~~~~------~v~~l~~sp~ 280 (357)
T 4g56_B 216 PATRI---DFCASDTIPTSVTWHPEKDDTFACGDETG------NVSLVNIKNPDSAQTSAVHSQ------NITGLAYSYH 280 (357)
T ss_dssp CBCBC---CCTTCCSCEEEEEECTTSTTEEEEEESSS------CEEEEESSCGGGCEEECCCSS------CEEEEEECSS
T ss_pred eeeee---eeccccccccchhhhhcccceEEEeeccc------ceeEEECCCCcEeEEEeccce------eEEEEEEcCC
Confidence 22111 10000000 23333 234433333332 6888998875432 2222211 12233332 4
Q ss_pred C-eEEEEEecCCCceEEEEEEC-CceeEEEEecCCCCCeeEEEEEEe-CCCEEEEEecccCCccccCCcEEEEEeCCCC
Q 016891 261 G-CLYFSCLCNYPQPVDIWVLM-GCWTKTFSFPRSVGDYVKALAYSK-SGGKVLVDKFEYGEDEDINRWELFWYDLQNQ 336 (381)
Q Consensus 261 G-~L~~~~~~~~~~~~~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~-~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~ 336 (381)
| ++.+....++ .+.||.++ .+ .+..+.. .....-+++.+ ++. +++.. ..+..|.+||+.+.
T Consensus 281 ~~~~lasgs~D~--~i~iwd~~~~~--~~~~~~H--~~~V~~vafsP~d~~-~l~s~--------s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 281 SSPFLASISEDC--TVAVLDADFSE--VFRDLSH--RDFVTGVAWSPLDHS-KFTTV--------GWDHKVLHHHLPSE 344 (357)
T ss_dssp SSCCEEEEETTS--CEEEECTTSCE--EEEECCC--SSCEEEEEECSSSTT-EEEEE--------ETTSCEEEEECC--
T ss_pred CCCEEEEEeCCC--EEEEEECCCCc--EeEECCC--CCCEEEEEEeCCCCC-EEEEE--------cCCCeEEEEECCCC
Confidence 5 4444444444 79999877 32 2233331 13355566665 677 55552 34567999998664
No 84
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=80.49 E-value=27 Score=30.00 Aligned_cols=127 Identities=13% Similarity=0.090 Sum_probs=66.1
Q ss_pred eEEEEEEcCCCcEEEcccCCCcceecCCCcEEE--CCeeEEEEeeCCCCCCcCEEEEEECCCCeeeeecCCCCCCCCCce
Q 016891 175 TEIAVYSLRTNSWRRIRVDFPYYILHGWDGTFA--DGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEVPLPHLENRNDVL 252 (381)
Q Consensus 175 ~~~~vyss~t~~W~~~~~~~p~~~~~~~~~v~~--nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~ 252 (381)
..+.+|+.+++.-.... ..+... ..+.+ +|.....+..+. .|..+|+.+.+...+.... ..
T Consensus 205 g~i~~~d~~~~~~~~~~-~~~~~v----~~~~~s~~~~~l~~~~~~~------~i~~~~~~~~~~~~~~~~~------~~ 267 (337)
T 1gxr_A 205 NTVRSWDLREGRQLQQH-DFTSQI----FSLGYCPTGEWLAVGMESS------NVEVLHVNKPDKYQLHLHE------SC 267 (337)
T ss_dssp SEEEEEETTTTEEEEEE-ECSSCE----EEEEECTTSSEEEEEETTS------CEEEEETTSSCEEEECCCS------SC
T ss_pred CcEEEEECCCCceEeee-cCCCce----EEEEECCCCCEEEEEcCCC------cEEEEECCCCCeEEEcCCc------cc
Confidence 46788888776432221 111111 22222 455444444332 6889999876654332211 11
Q ss_pred eEEEEEE-CCeEEEEEecCCCceEEEEEEC-CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEE
Q 016891 253 VMFVGNF-SGCLYFSCLCNYPQPVDIWVLM-GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFW 330 (381)
Q Consensus 253 ~~~L~~~-~G~L~~~~~~~~~~~~~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~ 330 (381)
...+.-. +|++.+....++ .+.+|.++ .+-. .... ......-+.+.+++..|+.. .....+.+
T Consensus 268 v~~~~~~~~~~~l~~~~~dg--~i~~~~~~~~~~~--~~~~--~~~~v~~~~~s~~~~~l~~~---------~~dg~i~i 332 (337)
T 1gxr_A 268 VLSLKFAYCGKWFVSTGKDN--LLNAWRTPYGASI--FQSK--ESSSVLSCDISVDDKYIVTG---------SGDKKATV 332 (337)
T ss_dssp EEEEEECTTSSEEEEEETTS--EEEEEETTTCCEE--EEEE--CSSCEEEEEECTTSCEEEEE---------ETTSCEEE
T ss_pred eeEEEECCCCCEEEEecCCC--cEEEEECCCCeEE--EEec--CCCcEEEEEECCCCCEEEEe---------cCCCeEEE
Confidence 2233333 577666666555 89999988 3322 2222 11234556677788844444 34556888
Q ss_pred EeC
Q 016891 331 YDL 333 (381)
Q Consensus 331 yd~ 333 (381)
||+
T Consensus 333 w~~ 335 (337)
T 1gxr_A 333 YEV 335 (337)
T ss_dssp EEE
T ss_pred EEE
Confidence 875
No 85
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=80.38 E-value=31 Score=30.67 Aligned_cols=194 Identities=11% Similarity=0.030 Sum_probs=88.5
Q ss_pred cCcEEEEeeCCCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCCcE
Q 016891 108 CNGLIAFKNDENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTNSW 187 (381)
Q Consensus 108 ~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W 187 (381)
.+|.++.......+.|||..+++........... .......+.+.+. +.+-+ .. . . ...+.+|+.+++.-
T Consensus 104 ~d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~-h~~~V~~v~~spd-g~~l~-sg-s--~----dg~v~iwd~~~~~~ 173 (357)
T 4g56_B 104 SEKGILVASDSGAVELWEILEKESLLVNKFAKYE-HDDIVKTLSVFSD-GTQAV-SG-G--K----DFSVKVWDLSQKAV 173 (357)
T ss_dssp TTTEEEEEETTSCEEEC--------CCCCEEECC-CSSCEEEEEECSS-SSEEE-EE-E--T----TSCEEEEETTTTEE
T ss_pred CCCCEEEEECCCEEEEeeccccceeEEEeeccCC-CCCCEEEEEECCC-CCEEE-EE-e--C----CCeEEEEECCCCcE
Confidence 3555555556678999999988765544322111 1122344555543 22222 11 1 1 14577888877643
Q ss_pred EEcccCCCcceecCCCcEEE--CCe-eEEEEeeCCCCCCcCEEEEEECCCCeeeee-cCCCCCCCCCceeEEEEEE--CC
Q 016891 188 RRIRVDFPYYILHGWDGTFA--DGH-VHWLVTNNPEDYIENLIIAFNLKSEEFHEV-PLPHLENRNDVLVMFVGNF--SG 261 (381)
Q Consensus 188 ~~~~~~~p~~~~~~~~~v~~--nG~-lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~~~L~~~--~G 261 (381)
...-....... ..+.+ +|. +...+..+. .|..+|+.+.+.... ...... .....+.-. ++
T Consensus 174 ~~~~~~h~~~v----~~v~~s~~~~~~~~s~~~dg------~v~~wd~~~~~~~~~~~~~~~~----~~v~~v~~sp~~~ 239 (357)
T 4g56_B 174 LKSYNAHSSEV----NCVAACPGKDTIFLSCGEDG------RILLWDTRKPKPATRIDFCASD----TIPTSVTWHPEKD 239 (357)
T ss_dssp EEEECCCSSCE----EEEEECTTCSSCEEEEETTS------CEEECCTTSSSCBCBCCCTTCC----SCEEEEEECTTST
T ss_pred EEEEcCCCCCE----EEEEEccCCCceeeeeccCC------ceEEEECCCCceeeeeeecccc----ccccchhhhhccc
Confidence 32210100000 22332 233 223333321 688889877543222 221111 112233322 35
Q ss_pred eEEEEEecCCCceEEEEEEC-CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCce
Q 016891 262 CLYFSCLCNYPQPVDIWVLM-GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGA 338 (381)
Q Consensus 262 ~L~~~~~~~~~~~~~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~ 338 (381)
.+.+....++ .+.||.++ .+ ....+.. ......-+++.+++..+++.. ..+..|.+||+++++.
T Consensus 240 ~~la~g~~d~--~i~~wd~~~~~--~~~~~~~-~~~~v~~l~~sp~~~~~lasg--------s~D~~i~iwd~~~~~~ 304 (357)
T 4g56_B 240 DTFACGDETG--NVSLVNIKNPD--SAQTSAV-HSQNITGLAYSYHSSPFLASI--------SEDCTVAVLDADFSEV 304 (357)
T ss_dssp TEEEEEESSS--CEEEEESSCGG--GCEEECC-CSSCEEEEEECSSSSCCEEEE--------ETTSCEEEECTTSCEE
T ss_pred ceEEEeeccc--ceeEEECCCCc--EeEEEec-cceeEEEEEEcCCCCCEEEEE--------eCCCEEEEEECCCCcE
Confidence 5665555555 79999887 22 1222321 113345567777775455542 2445699999999887
No 86
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=80.24 E-value=26 Score=29.59 Aligned_cols=162 Identities=11% Similarity=0.059 Sum_probs=83.4
Q ss_pred EEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCCcEEEcccCCCcceecCCCcEEE---CCeeEEEEeeCCCCCC
Q 016891 147 VDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTNSWRRIRVDFPYYILHGWDGTFA---DGHVHWLVTNNPEDYI 223 (381)
Q Consensus 147 ~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W~~~~~~~p~~~~~~~~~v~~---nG~lYwl~~~~~~~~~ 223 (381)
..++.+|+..+. ++.... ....+.+|+..++.-+.+. ... .... .++.+ +|.+||......
T Consensus 38 ~~gi~~d~~~~~--ly~~d~------~~~~I~~~~~~g~~~~~~~-~~~--~~~p-~~ia~d~~~~~lyv~d~~~~---- 101 (267)
T 1npe_A 38 IIGLAFDCVDKV--VYWTDI------SEPSIGRASLHGGEPTTII-RQD--LGSP-EGIALDHLGRTIFWTDSQLD---- 101 (267)
T ss_dssp EEEEEEETTTTE--EEEEET------TTTEEEEEESSSCCCEEEE-CTT--CCCE-EEEEEETTTTEEEEEETTTT----
T ss_pred EEEEEEecCCCE--EEEEEC------CCCEEEEEecCCCCcEEEE-ECC--CCCc-cEEEEEecCCeEEEEECCCC----
Confidence 346666765442 222211 1246777887665322221 111 1011 44544 579999875442
Q ss_pred cCEEEEEECCCCeeeeecCCCCCCCCCceeEEEEEE--CCeEEEEEecCCCceEEEEEECCceeEEEEecCCCCCeeEEE
Q 016891 224 ENLIIAFNLKSEEFHEVPLPHLENRNDVLVMFVGNF--SGCLYFSCLCNYPQPVDIWVLMGCWTKTFSFPRSVGDYVKAL 301 (381)
Q Consensus 224 ~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~--~G~L~~~~~~~~~~~~~iW~l~~~W~~~~~i~~~~~~~~~~~ 301 (381)
.|..+|+.....+.+ .+.... ....++.. +|.|+++........+....++..-.+.. ..... ....-+
T Consensus 102 --~I~~~~~~g~~~~~~-~~~~~~----~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~-~~~~~-~~P~gi 172 (267)
T 1npe_A 102 --RIEVAKMDGTQRRVL-FDTGLV----NPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRIL-AQDNL-GLPNGL 172 (267)
T ss_dssp --EEEEEETTSCSCEEE-ECSSCS----SEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEE-ECTTC-SCEEEE
T ss_pred --EEEEEEcCCCCEEEE-EECCCC----CccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEE-EECCC-CCCcEE
Confidence 799999876543333 111111 12233333 68888887653222444444443222211 11111 234556
Q ss_pred EEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCceeeeeE
Q 016891 302 AYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGAAADQV 343 (381)
Q Consensus 302 ~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~~~~~v 343 (381)
++.++++.||+.. .....|..+|+++... +.+
T Consensus 173 a~d~~~~~lyv~d--------~~~~~I~~~~~~g~~~--~~~ 204 (267)
T 1npe_A 173 TFDAFSSQLCWVD--------AGTHRAECLNPAQPGR--RKV 204 (267)
T ss_dssp EEETTTTEEEEEE--------TTTTEEEEEETTEEEE--EEE
T ss_pred EEcCCCCEEEEEE--------CCCCEEEEEecCCCce--EEE
Confidence 6666677688883 3456899999988765 444
No 87
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=80.10 E-value=28 Score=29.85 Aligned_cols=193 Identities=8% Similarity=-0.065 Sum_probs=91.4
Q ss_pred CCCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCCcEEEc-ccCCC
Q 016891 117 DENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTNSWRRI-RVDFP 195 (381)
Q Consensus 117 ~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W~~~-~~~~p 195 (381)
....++++||.+++...+..+.... ......++.+++..+. +..... ...+.+|+.. +..+.+ . ...
T Consensus 44 ~~~~i~~~d~~~g~~~~~~~~~~~~-~~~~~~~i~~~~~~g~--l~v~~~-------~~~l~~~d~~-g~~~~~~~-~~~ 111 (314)
T 1pjx_A 44 PAGEILRIDLKTGKKTVICKPEVNG-YGGIPAGCQCDRDANQ--LFVADM-------RLGLLVVQTD-GTFEEIAK-KDS 111 (314)
T ss_dssp ECCEEEEECTTTCCEEEEECCEETT-EECCEEEEEECSSSSE--EEEEET-------TTEEEEEETT-SCEEECCS-BCT
T ss_pred CCCEEEEEeCCCCcEEEEEecccCC-CCCCCceEEEecCCCc--EEEEEC-------CCCEEEEeCC-CCEEEEEe-ccC
Confidence 4567899999998887654311000 0112334555554232 222211 1257788887 776655 3 211
Q ss_pred cceecCC-CcEEE--CCeeEEEEeeCC---------CCCCcCEEEEEECCCCeeeeecCCCCCCCCCceeEEEEE----E
Q 016891 196 YYILHGW-DGTFA--DGHVHWLVTNNP---------EDYIENLIIAFNLKSEEFHEVPLPHLENRNDVLVMFVGN----F 259 (381)
Q Consensus 196 ~~~~~~~-~~v~~--nG~lYwl~~~~~---------~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~----~ 259 (381)
....... ..+.+ +|.+|+...... .......|..+|.. .+...+...... ....... -
T Consensus 112 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~-----~~~i~~~~~~d~ 185 (314)
T 1pjx_A 112 EGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQF-----PNGIAVRHMNDG 185 (314)
T ss_dssp TSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESS-----EEEEEEEECTTS
T ss_pred CCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCCC-----cceEEEecccCC
Confidence 1111111 44544 578876554320 00011268888887 555433110000 1111222 3
Q ss_pred CC-eEEEEEecCCCceEEEEEEC--CceeEEEEecCCCC---CeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeC
Q 016891 260 SG-CLYFSCLCNYPQPVDIWVLM--GCWTKTFSFPRSVG---DYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDL 333 (381)
Q Consensus 260 ~G-~L~~~~~~~~~~~~~iW~l~--~~W~~~~~i~~~~~---~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~ 333 (381)
+| .|++...... .+.+|.++ ........+....+ ....-+++.++|. |++.. .....|..||+
T Consensus 186 dg~~l~v~~~~~~--~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-l~v~~--------~~~~~i~~~d~ 254 (314)
T 1pjx_A 186 RPYQLIVAETPTK--KLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNN-LLVAN--------WGSSHIEVFGP 254 (314)
T ss_dssp CEEEEEEEETTTT--EEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCC-EEEEE--------ETTTEEEEECT
T ss_pred CCCEEEEEECCCC--eEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCC-EEEEE--------cCCCEEEEEcC
Confidence 45 4555544333 66676654 33332222111111 1234455566777 77772 24567999999
Q ss_pred CCCce
Q 016891 334 QNQGA 338 (381)
Q Consensus 334 ~t~~~ 338 (381)
++++.
T Consensus 255 ~~g~~ 259 (314)
T 1pjx_A 255 DGGQP 259 (314)
T ss_dssp TCBSC
T ss_pred CCCcE
Confidence 95544
No 88
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=79.62 E-value=38 Score=32.45 Aligned_cols=106 Identities=12% Similarity=-0.011 Sum_probs=65.5
Q ss_pred CCeeEEEEeeCCCCCCcCEEEEEECCCCee-eeecCCCCCCCCCceeEEEEE-ECCeEEEEEecCCCceEEEEEEC-Cce
Q 016891 208 DGHVHWLVTNNPEDYIENLIIAFNLKSEEF-HEVPLPHLENRNDVLVMFVGN-FSGCLYFSCLCNYPQPVDIWVLM-GCW 284 (381)
Q Consensus 208 nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~-~~i~~P~~~~~~~~~~~~L~~-~~G~L~~~~~~~~~~~~~iW~l~-~~W 284 (381)
+|.+|.....+. .|..+|..+.+. ..++.... ...+.. -+|+..++...++ .+.+|.+. ..-
T Consensus 148 ~~~~~vs~~~d~------~V~v~D~~t~~~~~~i~~g~~-------~~~v~~spdg~~l~v~~~d~--~V~v~D~~~~t~ 212 (543)
T 1nir_A 148 PNLFSVTLRDAG------QIALVDGDSKKIVKVIDTGYA-------VHISRMSASGRYLLVIGRDA--RIDMIDLWAKEP 212 (543)
T ss_dssp GGEEEEEEGGGT------EEEEEETTTCCEEEEEECSTT-------EEEEEECTTSCEEEEEETTS--EEEEEETTSSSC
T ss_pred CCEEEEEEcCCC------eEEEEECCCceEEEEEecCcc-------cceEEECCCCCEEEEECCCC--eEEEEECcCCCC
Confidence 677776665543 799999987654 33333211 112322 3676555555543 89999983 222
Q ss_pred eEEEEecCCCCCeeEEEEEEe----CCCEEEEEecccCCccccCCcEEEEEeCCCCce
Q 016891 285 TKTFSFPRSVGDYVKALAYSK----SGGKVLVDKFEYGEDEDINRWELFWYDLQNQGA 338 (381)
Q Consensus 285 ~~~~~i~~~~~~~~~~~~~~~----~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~ 338 (381)
..+.+++ .+...+-+++.+ +|+.++..+ .....+.++|.+|.+.
T Consensus 213 ~~~~~i~--~g~~p~~va~sp~~~~dg~~l~v~~--------~~~~~v~v~D~~t~~~ 260 (543)
T 1nir_A 213 TKVAEIK--IGIEARSVESSKFKGYEDRYTIAGA--------YWPPQFAIMDGETLEP 260 (543)
T ss_dssp EEEEEEE--CCSEEEEEEECCSTTCTTTEEEEEE--------EESSEEEEEETTTCCE
T ss_pred cEEEEEe--cCCCcceEEeCCCcCCCCCEEEEEE--------ccCCeEEEEecccccc
Confidence 3344554 234567778888 899676663 3456799999998876
No 89
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=79.27 E-value=31 Score=30.01 Aligned_cols=64 Identities=9% Similarity=0.115 Sum_probs=39.0
Q ss_pred CeEEEEEecCCCceEEEEEEC-Cc--eeEEEEec-CCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCC
Q 016891 261 GCLYFSCLCNYPQPVDIWVLM-GC--WTKTFSFP-RSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQN 335 (381)
Q Consensus 261 G~L~~~~~~~~~~~~~iW~l~-~~--W~~~~~i~-~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t 335 (381)
|++.++...++ .+.||.++ .+ ......+. ........-+++.++|..|+.. ..+..+.+||+.+
T Consensus 299 ~~~l~~~~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~---------~~dg~i~iwd~~~ 366 (366)
T 3k26_A 299 QKMLALGNQVG--KLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAV---------CDDASIWRWDRLR 366 (366)
T ss_dssp SSEEEEECTTS--CEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEE---------ETTSEEEEEEC--
T ss_pred CcEEEEEecCC--cEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEE---------eCCCEEEEEEecC
Confidence 66666665555 79999998 22 22344444 2112446667778888844444 4566799999864
No 90
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=79.14 E-value=5.4 Score=35.69 Aligned_cols=139 Identities=9% Similarity=0.107 Sum_probs=69.7
Q ss_pred eEEEEEEcCCCcEEEcccCCCcceecCC-CcEEE--CCeeEEEEeeCCCCCCcCEEEEEECCCCe-eeee-cCCCCCCCC
Q 016891 175 TEIAVYSLRTNSWRRIRVDFPYYILHGW-DGTFA--DGHVHWLVTNNPEDYIENLIIAFNLKSEE-FHEV-PLPHLENRN 249 (381)
Q Consensus 175 ~~~~vyss~t~~W~~~~~~~p~~~~~~~-~~v~~--nG~lYwl~~~~~~~~~~~~i~~fD~~~e~-~~~i-~~P~~~~~~ 249 (381)
..+.+|+..++.|+.+. .+.. .... ..+.+ +|.+-..+..+. .|..+|+.+.. +... .+....
T Consensus 33 ~~i~iw~~~~~~~~~~~-~~~~--h~~~v~~~~~s~~~~~l~s~s~d~------~v~vwd~~~~~~~~~~~~~~~~~--- 100 (377)
T 3dwl_C 33 NQVELYEQDGNGWKHAR-TFSD--HDKIVTCVDWAPKSNRIVTCSQDR------NAYVYEKRPDGTWKQTLVLLRLN--- 100 (377)
T ss_dssp SCBCEEEEETTEEEECC-CBCC--CSSCEEEEEECTTTCCEEEEETTS------SEEEC------CCCCEEECCCCS---
T ss_pred CEEEEEEccCCceEEEE-EEec--CCceEEEEEEeCCCCEEEEEeCCC------eEEEEEcCCCCceeeeeEecccC---
Confidence 45678888888887766 3221 0011 22222 344333333332 68889988766 3322 111111
Q ss_pred CceeEEEEEE-CCeEEEEEecCCCceEEEEEEC--CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCc
Q 016891 250 DVLVMFVGNF-SGCLYFSCLCNYPQPVDIWVLM--GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRW 326 (381)
Q Consensus 250 ~~~~~~L~~~-~G~L~~~~~~~~~~~~~iW~l~--~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~ 326 (381)
.....+.-. +|.+.+....++ .+.||.++ ..|.....+.........-+.+.+++..|+.. ..+.
T Consensus 101 -~~v~~~~~~~~~~~l~~~~~d~--~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~---------~~d~ 168 (377)
T 3dwl_C 101 -RAATFVRWSPNEDKFAVGSGAR--VISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAG---------CADR 168 (377)
T ss_dssp -SCEEEEECCTTSSCCEEEESSS--CEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEE---------ESSS
T ss_pred -CceEEEEECCCCCEEEEEecCC--eEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEE---------eCCC
Confidence 112223322 566666666555 79999988 55766666652122345667777788844444 3456
Q ss_pred EEEEEeCCCCc
Q 016891 327 ELFWYDLQNQG 337 (381)
Q Consensus 327 ~l~~yd~~t~~ 337 (381)
.+.+||++++.
T Consensus 169 ~i~iwd~~~~~ 179 (377)
T 3dwl_C 169 KAYVLSAYVRD 179 (377)
T ss_dssp CEEEEEECCSS
T ss_pred EEEEEEEEecc
Confidence 69999986544
No 91
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=78.96 E-value=5.1 Score=40.13 Aligned_cols=114 Identities=13% Similarity=0.042 Sum_probs=57.4
Q ss_pred CcEEE---CCeeEEEEeeCCCCCCcCEEEEEECCCCeeeeecCCCCCCCCCceeEEEEE--ECCeEEEEEecCCCceEEE
Q 016891 203 DGTFA---DGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEVPLPHLENRNDVLVMFVGN--FSGCLYFSCLCNYPQPVDI 277 (381)
Q Consensus 203 ~~v~~---nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~--~~G~L~~~~~~~~~~~~~i 277 (381)
.++.+ +|.|||...... ..|..+++.......+-.. ... ..-.|+. .+|+||++..... +|.+
T Consensus 499 ~giavDp~~g~ly~td~~~~-----~~I~~~~~dG~~~~~l~~~-~l~----~PnGlavd~~~~~LY~aD~~~~--~I~~ 566 (699)
T 1n7d_A 499 RAIVVDPVHGFMYWTDWGTP-----AKIKKGGLNGVDIYSLVTE-NIQ----WPNGITLDLLSGRLYWVDSKLH--SISS 566 (699)
T ss_dssp CCEECCSSSSCCEECCCSSS-----CCEEBCCSSSCCCCEESCS-SCS----SCCCEEECTTTCCEEEEETTTT--EEEE
T ss_pred ceEEEccCCCcEEEcccCCC-----CeEEEEeCCCCCeeEEEeC-CCC----CccEEEEeccCCEEEEEecCCC--eEEE
Confidence 45555 589999764321 2688888765443333110 110 0112333 3578888875433 4333
Q ss_pred EEECCceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCce
Q 016891 278 WVLMGCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGA 338 (381)
Q Consensus 278 W~l~~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~ 338 (381)
..++..-.+ ..+.. .+....|.++..+++.||+.. .....|..+|+.+++.
T Consensus 567 ~d~dG~~~~-~~~~~-~~~~~~P~glavd~~~lywtd--------~~~~~V~~~d~~~G~~ 617 (699)
T 1n7d_A 567 IDVNGGNRK-TILED-EKRLAHPFSLAVFEDKVFWTD--------IINEAIFSANRLTGSD 617 (699)
T ss_dssp ECSSSSCCE-EECCC-SSSCSSCCCCEEETTEEEEEC--------STTTCEEEEETTTEEE
T ss_pred EccCCCceE-EEEec-CCcCCCceEeEEECCEEEEEe--------CCCCeEEEEEccCCCc
Confidence 333322111 11111 111234444444455688882 3445799999987776
No 92
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=78.68 E-value=36 Score=30.35 Aligned_cols=186 Identities=10% Similarity=0.018 Sum_probs=92.7
Q ss_pred cCcEEEEeeCCCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCCcE
Q 016891 108 CNGLIAFKNDENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTNSW 187 (381)
Q Consensus 108 ~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W 187 (381)
.+|.++.......+.++|..+++....-.. + ......+.+.+... +- .... . ...+.+|+.+++.-
T Consensus 216 ~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~---~--~~~i~~~~~~~~~~-~l--~~~~--~----d~~i~i~d~~~~~~ 281 (425)
T 1r5m_A 216 DDDKFVIPGPKGAIFVYQITEKTPTGKLIG---H--HGPISVLEFNDTNK-LL--LSAS--D----DGTLRIWHGGNGNS 281 (425)
T ss_dssp ETTEEEEECGGGCEEEEETTCSSCSEEECC---C--SSCEEEEEEETTTT-EE--EEEE--T----TSCEEEECSSSBSC
T ss_pred CCCEEEEEcCCCeEEEEEcCCCceeeeecc---C--CCceEEEEECCCCC-EE--EEEc--C----CCEEEEEECCCCcc
Confidence 356666555667889999887654432111 1 11234455565433 22 2211 1 14577777766432
Q ss_pred EEcccCCCcceecCCCcEEE--CCeeEEEEeeCCCCCCcCEEEEEECCCCeeeee-cCCCCCCCCCceeEEEEEE-CCeE
Q 016891 188 RRIRVDFPYYILHGWDGTFA--DGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEV-PLPHLENRNDVLVMFVGNF-SGCL 263 (381)
Q Consensus 188 ~~~~~~~p~~~~~~~~~v~~--nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~~~L~~~-~G~L 263 (381)
...-....... ..+.+ +| ....+..+ ..|..+|+.+.+.... ..... ....+.-. +|.+
T Consensus 282 ~~~~~~~~~~i----~~~~~~~~~-~l~~~~~d------~~i~i~d~~~~~~~~~~~~~~~------~i~~~~~s~~~~~ 344 (425)
T 1r5m_A 282 QNCFYGHSQSI----VSASWVGDD-KVISCSMD------GSVRLWSLKQNTLLALSIVDGV------PIFAGRISQDGQK 344 (425)
T ss_dssp SEEECCCSSCE----EEEEEETTT-EEEEEETT------SEEEEEETTTTEEEEEEECTTC------CEEEEEECTTSSE
T ss_pred ceEecCCCccE----EEEEECCCC-EEEEEeCC------CcEEEEECCCCcEeEecccCCc------cEEEEEEcCCCCE
Confidence 11110111111 22222 45 33333332 2799999987654332 22111 12223333 5776
Q ss_pred EEEEecCCCceEEEEEEC-Cc------------------eeEEEEecCCCCC-eeEEEEEEeCCCEEEEEecccCCcccc
Q 016891 264 YFSCLCNYPQPVDIWVLM-GC------------------WTKTFSFPRSVGD-YVKALAYSKSGGKVLVDKFEYGEDEDI 323 (381)
Q Consensus 264 ~~~~~~~~~~~~~iW~l~-~~------------------W~~~~~i~~~~~~-~~~~~~~~~~g~~i~l~~~~~~~~~~~ 323 (381)
.++...++ .+.||.++ .. +..+..+...... ...-+.+.+++..|+.. .
T Consensus 345 l~~~~~dg--~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~---------~ 413 (425)
T 1r5m_A 345 YAVAFMDG--QVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVA---------Y 413 (425)
T ss_dssp EEEEETTS--CEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEE---------E
T ss_pred EEEEECCC--eEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEE---------e
Confidence 66666555 79999988 21 1133333311111 46667777888855555 3
Q ss_pred CCcEEEEEeCCC
Q 016891 324 NRWELFWYDLQN 335 (381)
Q Consensus 324 ~~~~l~~yd~~t 335 (381)
....+.+||++.
T Consensus 414 ~dg~i~iw~~~g 425 (425)
T 1r5m_A 414 SLQEGSVVAIPG 425 (425)
T ss_dssp SSSCCEEEECCC
T ss_pred cCceEEEEeecC
Confidence 556699999863
No 93
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=78.41 E-value=18 Score=30.97 Aligned_cols=117 Identities=9% Similarity=-0.019 Sum_probs=62.9
Q ss_pred CCe-eEEEEeeCCCCCCcCEEEEEECCCCeeeeecCCCCCCCCCceeEEEEE-ECCeEEEEEecCCCceEEEEEEC-Cce
Q 016891 208 DGH-VHWLVTNNPEDYIENLIIAFNLKSEEFHEVPLPHLENRNDVLVMFVGN-FSGCLYFSCLCNYPQPVDIWVLM-GCW 284 (381)
Q Consensus 208 nG~-lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~-~~G~L~~~~~~~~~~~~~iW~l~-~~W 284 (381)
+|. +||...... .|..+|+.++ .+.+..|... ...+.. -+|+|+++..... .+.+|..+ .+.
T Consensus 38 ~g~~l~~~~~~~~------~i~~~~~~~~-~~~~~~~~~~------~~~l~~~~dg~l~v~~~~~~--~i~~~d~~~g~~ 102 (296)
T 3e5z_A 38 ARSAVIFSDVRQN------RTWAWSDDGQ-LSPEMHPSHH------QNGHCLNKQGHLIACSHGLR--RLERQREPGGEW 102 (296)
T ss_dssp GGTEEEEEEGGGT------EEEEEETTSC-EEEEESSCSS------EEEEEECTTCCEEEEETTTT--EEEEECSTTCCE
T ss_pred CCCEEEEEeCCCC------EEEEEECCCC-eEEEECCCCC------cceeeECCCCcEEEEecCCC--eEEEEcCCCCcE
Confidence 465 999887653 7999999988 6666544321 223443 3688876654333 66666664 444
Q ss_pred eEEEEecCC-CCCeeEEEEEEeCCCEEEEEecccCC---------ccccCCcEEEEEeCCCCceeeeeE
Q 016891 285 TKTFSFPRS-VGDYVKALAYSKSGGKVLVDKFEYGE---------DEDINRWELFWYDLQNQGAAADQV 343 (381)
Q Consensus 285 ~~~~~i~~~-~~~~~~~~~~~~~g~~i~l~~~~~~~---------~~~~~~~~l~~yd~~t~~~~~~~v 343 (381)
......... ......-+.+.++|. +++....++. ........|+.||++ ++. +.+
T Consensus 103 ~~~~~~~~~~~~~~~~~i~~d~~G~-l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~--~~~ 167 (296)
T 3e5z_A 103 ESIADSFEGKKLNSPNDVCLAPDGS-LWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL--SAP 167 (296)
T ss_dssp EEEECEETTEECCCCCCEEECTTSC-EEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE--EEE
T ss_pred EEEeeccCCCCCCCCCCEEECCCCC-EEEECCccccccccccccccccCCCcEEEEECCC-CCE--EEe
Confidence 333211110 011223456677887 7775210000 000113479999988 566 544
No 94
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=78.36 E-value=41 Score=30.86 Aligned_cols=64 Identities=9% Similarity=0.051 Sum_probs=40.2
Q ss_pred CeEEEEEecCCCceEEEEEEC-CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCce
Q 016891 261 GCLYFSCLCNYPQPVDIWVLM-GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGA 338 (381)
Q Consensus 261 G~L~~~~~~~~~~~~~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~ 338 (381)
|++.+....++ .+.||.++ ..-....... ......-+++. +|..|+.. ..+..|.+||+++++.
T Consensus 210 ~~~l~s~~~d~--~i~vwd~~~~~~~~~~~~~--h~~~v~~~~~s-d~~~l~s~---------~~d~~v~vwd~~~~~~ 274 (450)
T 2vdu_B 210 HQFIITSDRDE--HIKISHYPQCFIVDKWLFG--HKHFVSSICCG-KDYLLLSA---------GGDDKIFAWDWKTGKN 274 (450)
T ss_dssp CEEEEEEETTS--CEEEEEESCTTCEEEECCC--CSSCEEEEEEC-STTEEEEE---------ESSSEEEEEETTTCCE
T ss_pred CcEEEEEcCCC--cEEEEECCCCceeeeeecC--CCCceEEEEEC-CCCEEEEE---------eCCCeEEEEECCCCcE
Confidence 66666666555 79999998 4322221111 11335556677 88845544 3566899999999875
No 95
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=78.03 E-value=25 Score=31.06 Aligned_cols=71 Identities=17% Similarity=0.231 Sum_probs=46.6
Q ss_pred CCeEEEEEecCCCceEEEEEEC-CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCce
Q 016891 260 SGCLYFSCLCNYPQPVDIWVLM-GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGA 338 (381)
Q Consensus 260 ~G~L~~~~~~~~~~~~~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~ 338 (381)
+|++.+.+..++ .+.||.++ ..|.....+.........-+++.++|..|+.. ..+..+.+||.+++..
T Consensus 27 ~g~~las~~~D~--~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~---------s~D~~v~iw~~~~~~~ 95 (345)
T 3fm0_A 27 AGTLLASCGGDR--RIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASA---------SFDATTCIWKKNQDDF 95 (345)
T ss_dssp TSSCEEEEETTS--CEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEE---------ETTSCEEEEEECCC-E
T ss_pred CCCEEEEEcCCC--eEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEE---------ECCCcEEEEEccCCCe
Confidence 577666666655 79999999 77876555432222346667778888844444 3455688899888876
Q ss_pred eeeeE
Q 016891 339 AADQV 343 (381)
Q Consensus 339 ~~~~v 343 (381)
+.+
T Consensus 96 --~~~ 98 (345)
T 3fm0_A 96 --ECV 98 (345)
T ss_dssp --EEE
T ss_pred --EEE
Confidence 544
No 96
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=77.82 E-value=35 Score=29.83 Aligned_cols=97 Identities=21% Similarity=0.281 Sum_probs=60.7
Q ss_pred EEEEEECCCCeeeee-cCCCCCCCCCceeEEEEEE-C--CeEEEEEecCCCceEEEEEEC-CceeEEEEecCCCCCeeEE
Q 016891 226 LIIAFNLKSEEFHEV-PLPHLENRNDVLVMFVGNF-S--GCLYFSCLCNYPQPVDIWVLM-GCWTKTFSFPRSVGDYVKA 300 (381)
Q Consensus 226 ~i~~fD~~~e~~~~i-~~P~~~~~~~~~~~~L~~~-~--G~L~~~~~~~~~~~~~iW~l~-~~W~~~~~i~~~~~~~~~~ 300 (381)
.|..+|+.+++...+ .+.... ..-..+.-. + |.+.+....++ .+.||.++ ..|.....+... .....-
T Consensus 34 ~i~iw~~~~~~~~~~~~~~~h~----~~v~~~~~~~~~~~~~l~s~~~dg--~v~iwd~~~~~~~~~~~~~~~-~~~v~~ 106 (379)
T 3jrp_A 34 TIKIFEVEGETHKLIDTLTGHE----GPVWRVDWAHPKFGTILASCSYDG--KVLIWKEENGRWSQIAVHAVH-SASVNS 106 (379)
T ss_dssp CEEEEEEETTEEEEEEEECCCS----SCEEEEEECCGGGCSEEEEEETTS--CEEEEEEETTEEEEEEEECCC-SSCEEE
T ss_pred cEEEEecCCCcceeeeEecCCC----CcEEEEEeCCCCCCCEEEEeccCC--EEEEEEcCCCceeEeeeecCC-CcceEE
Confidence 688888876666554 222111 112233332 2 67777666665 79999999 788777766521 133566
Q ss_pred EEEEeC--CCEEEEEecccCCccccCCcEEEEEeCCCCce
Q 016891 301 LAYSKS--GGKVLVDKFEYGEDEDINRWELFWYDLQNQGA 338 (381)
Q Consensus 301 ~~~~~~--g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~ 338 (381)
+.+.++ +..++.. ..+..+.+||++++..
T Consensus 107 ~~~~~~~~~~~l~~~---------~~d~~i~v~d~~~~~~ 137 (379)
T 3jrp_A 107 VQWAPHEYGPLLLVA---------SSDGKVSVVEFKENGT 137 (379)
T ss_dssp EEECCGGGCSEEEEE---------ETTSEEEEEECCTTSC
T ss_pred EEeCCCCCCCEEEEe---------cCCCcEEEEecCCCCc
Confidence 677777 7745555 4567899999998844
No 97
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=76.98 E-value=48 Score=32.07 Aligned_cols=106 Identities=10% Similarity=-0.036 Sum_probs=63.0
Q ss_pred CCeeEEEEeeCCCCCCcCEEEEEECCCCee-eeecCCCCCCCCCceeEEEEE-ECCeEEEEEecCCCceEEEEEEC-Cce
Q 016891 208 DGHVHWLVTNNPEDYIENLIIAFNLKSEEF-HEVPLPHLENRNDVLVMFVGN-FSGCLYFSCLCNYPQPVDIWVLM-GCW 284 (381)
Q Consensus 208 nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~-~~i~~P~~~~~~~~~~~~L~~-~~G~L~~~~~~~~~~~~~iW~l~-~~W 284 (381)
++.+|.....+ ..|.++|..+.+. ..++..... . .+.. -+|+..++...++ .+.+|.+. ..-
T Consensus 166 ~~~~~V~~~~~------~~V~viD~~t~~v~~~i~~g~~p------~-~v~~SpDGr~lyv~~~dg--~V~viD~~~~t~ 230 (567)
T 1qks_A 166 ENLFSVTLRDA------GQIALIDGSTYEIKTVLDTGYAV------H-ISRLSASGRYLFVIGRDG--KVNMIDLWMKEP 230 (567)
T ss_dssp GGEEEEEETTT------TEEEEEETTTCCEEEEEECSSCE------E-EEEECTTSCEEEEEETTS--EEEEEETTSSSC
T ss_pred CceEEEEeCCC------CeEEEEECCCCeEEEEEeCCCCc------c-ceEECCCCCEEEEEcCCC--eEEEEECCCCCC
Confidence 34555555433 2899999988654 334433211 2 2333 3676544444333 67777763 233
Q ss_pred eEEEEecCCCCCeeEEEEEE----eCCCEEEEEecccCCccccCCcEEEEEeCCCCce
Q 016891 285 TKTFSFPRSVGDYVKALAYS----KSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGA 338 (381)
Q Consensus 285 ~~~~~i~~~~~~~~~~~~~~----~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~ 338 (381)
..+.+|. .+...+-+++. ++|+++++.+ .....+.++|..|.+.
T Consensus 231 ~~v~~i~--~G~~P~~ia~s~~~~pDGk~l~v~n--------~~~~~v~ViD~~t~~~ 278 (567)
T 1qks_A 231 TTVAEIK--IGSEARSIETSKMEGWEDKYAIAGA--------YWPPQYVIMDGETLEP 278 (567)
T ss_dssp CEEEEEE--CCSEEEEEEECCSTTCTTTEEEEEE--------EETTEEEEEETTTCCE
T ss_pred cEeEEEe--cCCCCceeEEccccCCCCCEEEEEE--------ccCCeEEEEECCCCcE
Confidence 4555665 23445667777 4898777774 4567799999988777
No 98
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=76.84 E-value=25 Score=32.27 Aligned_cols=114 Identities=11% Similarity=0.075 Sum_probs=63.5
Q ss_pred CcEEE--CCeeEEEEeeCCCCCCcCEEEEEECCCCeeeeecCCCCCCCCCceeEEEEEE-CCe-EEEEEecCCCceEEEE
Q 016891 203 DGTFA--DGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEVPLPHLENRNDVLVMFVGNF-SGC-LYFSCLCNYPQPVDIW 278 (381)
Q Consensus 203 ~~v~~--nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~-~G~-L~~~~~~~~~~~~~iW 278 (381)
.++.+ +|.|||...... .|..+|+.+.....+...... .. ++.. +|. |++....... .||
T Consensus 134 ~~la~d~~g~lyv~d~~~~------~I~~id~~~g~~~~~~~~~~~-----~~--ia~~~~g~~l~~~d~~~~~---~I~ 197 (409)
T 3hrp_A 134 WGIAAVGNNTVLAYQRDDP------RVRLISVDDNKVTTVHPGFKG-----GK--PAVTKDKQRVYSIGWEGTH---TVY 197 (409)
T ss_dssp EEEEECSTTEEEEEETTTT------EEEEEETTTTEEEEEEETCCB-----CB--CEECTTSSEEEEEBSSTTC---EEE
T ss_pred eEEEEeCCCCEEEEecCCC------cEEEEECCCCEEEEeeccCCC-----Cc--eeEecCCCcEEEEecCCCc---eEE
Confidence 34444 689999876442 799999998777665322111 12 3332 444 4444433321 566
Q ss_pred EEC--CceeE--EEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCceeeeeE
Q 016891 279 VLM--GCWTK--TFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGAAADQV 343 (381)
Q Consensus 279 ~l~--~~W~~--~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~~~~~v 343 (381)
.++ ..|.. .-.+.........-+++.++++.|++. .....++.||++++.. +.+
T Consensus 198 ~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~---------d~~~~I~~~d~~~~~~--~~~ 255 (409)
T 3hrp_A 198 VYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFV---------DSNKNFGRFNVKTQEV--TLI 255 (409)
T ss_dssp EEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEE---------CTTCEEEEEETTTCCE--EEE
T ss_pred EEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEE---------ECCCcEEEEECCCCCE--EEE
Confidence 666 45542 212221111233446667734448876 4456799999998877 555
No 99
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=76.71 E-value=37 Score=29.45 Aligned_cols=191 Identities=11% Similarity=0.076 Sum_probs=92.5
Q ss_pred EEEEeeCCCcEEEEccCCcc--eeeCCCCCCCCCCceEEEEEeEEC---CCCCEEEEEEEEEeecCccceEEEEEEcCCC
Q 016891 111 LIAFKNDENGIALWNPSTEE--HLILPKFWGDLKDFMVVDGFGYDA---VNDDYKVVRLVQLVIGNVGYTEIAVYSLRTN 185 (381)
Q Consensus 111 Ll~~~~~~~~~~V~NP~T~~--~~~LP~~~~~~~~~~~~~~~~~d~---~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~ 185 (381)
+|+....+..+.|||..+++ ...+........ .....+.+.+ ..+. .+.... ....+.+|+.+++
T Consensus 131 ~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~--~l~~~~------~d~~i~i~d~~~~ 200 (357)
T 3i2n_A 131 EIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENK--RDCWTVAFGNAYNQEER--VVCAGY------DNGDIKLFDLRNM 200 (357)
T ss_dssp EEEEEETTSCEEEECTTSCSSCSEEECCCTTSCC--CCEEEEEEECCCC-CCC--EEEEEE------TTSEEEEEETTTT
T ss_pred EEEEEeCCCeEEEEeCCCCCCcceeccccCCCCC--CceEEEEEEeccCCCCC--EEEEEc------cCCeEEEEECccC
Confidence 44444456789999998875 333332221111 1222333322 1222 222222 1146888888876
Q ss_pred cEEEcccCCCcceecCCCcEEE-----CCeeEEEEeeCCCCCCcCEEEEEECCCCeee----eecCCCCCCCCCceeEEE
Q 016891 186 SWRRIRVDFPYYILHGWDGTFA-----DGHVHWLVTNNPEDYIENLIIAFNLKSEEFH----EVPLPHLENRNDVLVMFV 256 (381)
Q Consensus 186 ~W~~~~~~~p~~~~~~~~~v~~-----nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~----~i~~P~~~~~~~~~~~~L 256 (381)
.=.... ...... ..+.+ +|.....+..+. .|..+|+.+.+.. ........ .....+
T Consensus 201 ~~~~~~-~~~~~v----~~~~~~~~~~~~~~l~~~~~dg------~i~i~d~~~~~~~~~~~~~~~~~~~----~~v~~~ 265 (357)
T 3i2n_A 201 ALRWET-NIKNGV----CSLEFDRKDISMNKLVATSLEG------KFHVFDMRTQHPTKGFASVSEKAHK----STVWQV 265 (357)
T ss_dssp EEEEEE-ECSSCE----EEEEESCSSSSCCEEEEEESTT------EEEEEEEEEEETTTEEEEEEEECCS----SCEEEE
T ss_pred ceeeec-CCCCce----EEEEcCCCCCCCCEEEEECCCC------eEEEEeCcCCCcccceeeeccCCCc----CCEEEE
Confidence 532222 111111 22333 455555444332 7888888754321 11110111 122233
Q ss_pred EEE-CCe-EEEEEecCCCceEEEEEEC-C-----------------ceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecc
Q 016891 257 GNF-SGC-LYFSCLCNYPQPVDIWVLM-G-----------------CWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFE 316 (381)
Q Consensus 257 ~~~-~G~-L~~~~~~~~~~~~~iW~l~-~-----------------~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~ 316 (381)
.-. +|. +.+....++ .+.||.++ . .+..+..+... .....-+++.++|..|++..
T Consensus 266 ~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~s~-- 340 (357)
T 3i2n_A 266 RHLPQNRELFLTAGGAG--GLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLS-TQPISSLDWSPDKRGLCVCS-- 340 (357)
T ss_dssp EEETTEEEEEEEEETTS--EEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECC-SSCEEEEEECSSSTTEEEEE--
T ss_pred EECCCCCcEEEEEeCCC--cEEEeecCCCcccccccCCCCccccccccceeeccccC-CCCeeEEEEcCCCCeEEEEe--
Confidence 333 466 444444444 89999987 1 23444444411 13355677778888555442
Q ss_pred cCCccccCCcEEEEEeCCCCc
Q 016891 317 YGEDEDINRWELFWYDLQNQG 337 (381)
Q Consensus 317 ~~~~~~~~~~~l~~yd~~t~~ 337 (381)
..+..+.+||+++..
T Consensus 341 ------~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 341 ------SFDQTVRVLIVTKLN 355 (357)
T ss_dssp ------ETTSEEEEEEECC--
T ss_pred ------cCCCcEEEEECCCcc
Confidence 356679999988653
No 100
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=76.19 E-value=56 Score=31.26 Aligned_cols=193 Identities=11% Similarity=0.010 Sum_probs=98.4
Q ss_pred cCcEEEEee-CCCcEEEEccCCcceee-CCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEc--C
Q 016891 108 CNGLIAFKN-DENGIALWNPSTEEHLI-LPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSL--R 183 (381)
Q Consensus 108 ~~GLl~~~~-~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss--~ 183 (381)
-+|.+++.. ....+.|+|+.|++... ++.. . . ..++.+++.. .|-.+ ... + ..+.+|+. .
T Consensus 147 p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g---~--~--~~~v~~spdg-~~l~v-~~~----d---~~V~v~D~~~~ 210 (543)
T 1nir_A 147 LPNLFSVTLRDAGQIALVDGDSKKIVKVIDTG---Y--A--VHISRMSASG-RYLLV-IGR----D---ARIDMIDLWAK 210 (543)
T ss_dssp GGGEEEEEEGGGTEEEEEETTTCCEEEEEECS---T--T--EEEEEECTTS-CEEEE-EET----T---SEEEEEETTSS
T ss_pred CCCEEEEEEcCCCeEEEEECCCceEEEEEecC---c--c--cceEEECCCC-CEEEE-ECC----C---CeEEEEECcCC
Confidence 366766655 45679999999987654 3211 1 1 2345555533 33222 211 1 56888888 5
Q ss_pred CCcEEEcccCCCcceecCCCcEEE------CCe-eEEEEeeCCCCCCcCEEEEEECCCCee-eeecCCCC-CC---CCCc
Q 016891 184 TNSWRRIRVDFPYYILHGWDGTFA------DGH-VHWLVTNNPEDYIENLIIAFNLKSEEF-HEVPLPHL-EN---RNDV 251 (381)
Q Consensus 184 t~~W~~~~~~~p~~~~~~~~~v~~------nG~-lYwl~~~~~~~~~~~~i~~fD~~~e~~-~~i~~P~~-~~---~~~~ 251 (381)
++. .+. .++.... . .++.+ +|. +|....... .|.++|..+.+. ..++.+.. .. .+..
T Consensus 211 t~~--~~~-~i~~g~~-p-~~va~sp~~~~dg~~l~v~~~~~~------~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~ 279 (543)
T 1nir_A 211 EPT--KVA-EIKIGIE-A-RSVESSKFKGYEDRYTIAGAYWPP------QFAIMDGETLEPKQIVSTRGMTVDTQTYHPE 279 (543)
T ss_dssp SCE--EEE-EEECCSE-E-EEEEECCSTTCTTTEEEEEEEESS------EEEEEETTTCCEEEEEECCEECSSSCCEESC
T ss_pred CCc--EEE-EEecCCC-c-ceEEeCCCcCCCCCEEEEEEccCC------eEEEEeccccccceeecccCcccCccccccC
Confidence 543 222 1111100 0 23333 565 444443332 789999887554 33444211 00 0001
Q ss_pred -eeEEEEEE-CCeEEEEEecCCCceEEEEEEC-CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEE
Q 016891 252 -LVMFVGNF-SGCLYFSCLCNYPQPVDIWVLM-GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWEL 328 (381)
Q Consensus 252 -~~~~L~~~-~G~L~~~~~~~~~~~~~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l 328 (381)
....+... +|...++...... ++.+|.+. ..-.++..++ .+...+-+++.++|.+++..+ ...+.|
T Consensus 280 ~~v~~i~~s~~~~~~~vs~~~~g-~i~vvd~~~~~~l~~~~i~--~~~~~~~~~~spdg~~l~va~--------~~~~~v 348 (543)
T 1nir_A 280 PRVAAIIASHEHPEFIVNVKETG-KVLLVNYKDIDNLTVTSIG--AAPFLHDGGWDSSHRYFMTAA--------NNSNKV 348 (543)
T ss_dssp CCEEEEEECSSSSEEEEEETTTT-EEEEEECTTSSSCEEEEEE--CCSSCCCEEECTTSCEEEEEE--------GGGTEE
T ss_pred CceEEEEECCCCCEEEEEECCCC-eEEEEEecCCCcceeEEec--cCcCccCceECCCCCEEEEEe--------cCCCeE
Confidence 11233333 3554455554433 77777766 2222333444 122344567788898666653 235679
Q ss_pred EEEeCCCCce
Q 016891 329 FWYDLQNQGA 338 (381)
Q Consensus 329 ~~yd~~t~~~ 338 (381)
.++|++++++
T Consensus 349 ~v~D~~tg~l 358 (543)
T 1nir_A 349 AVIDSKDRRL 358 (543)
T ss_dssp EEEETTTTEE
T ss_pred EEEECCCCeE
Confidence 9999999988
No 101
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=76.18 E-value=37 Score=29.22 Aligned_cols=139 Identities=9% Similarity=-0.002 Sum_probs=79.7
Q ss_pred eEEEEEEcCCCcEEEcccCCCcceecCC-CcEEECCeeEEEEeeCCCCCCcCEEEEEECCCCe-eeeecCCCCCCCCCce
Q 016891 175 TEIAVYSLRTNSWRRIRVDFPYYILHGW-DGTFADGHVHWLVTNNPEDYIENLIIAFNLKSEE-FHEVPLPHLENRNDVL 252 (381)
Q Consensus 175 ~~~~vyss~t~~W~~~~~~~p~~~~~~~-~~v~~nG~lYwl~~~~~~~~~~~~i~~fD~~~e~-~~~i~~P~~~~~~~~~ 252 (381)
..+.+++.++++=.... .++. .... .-...++.+|.+..... .+.+||..+.+ -..++.|...
T Consensus 65 S~v~~vD~~Tgkv~~~~-~l~~--~~FgeGit~~g~~ly~ltw~~~------~v~v~D~~t~~~~~ti~~~~eG------ 129 (262)
T 3nol_A 65 SSIRKVDIESGKTLQQI-ELGK--RYFGEGISDWKDKIVGLTWKNG------LGFVWNIRNLRQVRSFNYDGEG------ 129 (262)
T ss_dssp EEEEEECTTTCCEEEEE-ECCT--TCCEEEEEEETTEEEEEESSSS------EEEEEETTTCCEEEEEECSSCC------
T ss_pred ceEEEEECCCCcEEEEE-ecCC--ccceeEEEEeCCEEEEEEeeCC------EEEEEECccCcEEEEEECCCCc------
Confidence 46888888887533222 1221 1111 23456789999876553 89999998744 3555665422
Q ss_pred eEEEEEECCeEEEEEecCCCceEEEEEEC-CceeEEEEecC-CCC---CeeEEEEEEeCCCEEEEEecccCCccccCCcE
Q 016891 253 VMFVGNFSGCLYFSCLCNYPQPVDIWVLM-GCWTKTFSFPR-SVG---DYVKALAYSKSGGKVLVDKFEYGEDEDINRWE 327 (381)
Q Consensus 253 ~~~L~~~~G~L~~~~~~~~~~~~~iW~l~-~~W~~~~~i~~-~~~---~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~ 327 (381)
..|+.-+++|++... .. .||.++ ..=..+.+|.- .-+ ....-+... +|. |+... ...+.
T Consensus 130 -~glt~dg~~L~~SdG-s~----~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~-lyan~--------w~~~~ 193 (262)
T 3nol_A 130 -WGLTHNDQYLIMSDG-TP----VLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGE-IFANV--------WQTNK 193 (262)
T ss_dssp -CCEEECSSCEEECCS-SS----EEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTE-EEEEE--------TTSSE
T ss_pred -eEEecCCCEEEEECC-CC----eEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCE-EEEEE--------ccCCe
Confidence 234444567777653 12 488888 44455555551 111 111112222 665 88874 34568
Q ss_pred EEEEeCCCCceeeeeEEE
Q 016891 328 LFWYDLQNQGAAADQVTI 345 (381)
Q Consensus 328 l~~yd~~t~~~~~~~v~~ 345 (381)
|...|++|+++. +.|..
T Consensus 194 I~vIDp~tG~V~-~~Id~ 210 (262)
T 3nol_A 194 IVRIDPETGKVT-GIIDL 210 (262)
T ss_dssp EEEECTTTCBEE-EEEEC
T ss_pred EEEEECCCCcEE-EEEEC
Confidence 999999999982 44544
No 102
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=75.80 E-value=41 Score=31.12 Aligned_cols=112 Identities=12% Similarity=0.046 Sum_probs=63.9
Q ss_pred CcEEEC----CeeEEEEeeCCCCCCcCEEEEEECCCCeeeeecCCCCCCCCCceeEEEEEE-CCe-EEEEEecCCC-ceE
Q 016891 203 DGTFAD----GHVHWLVTNNPEDYIENLIIAFNLKSEEFHEVPLPHLENRNDVLVMFVGNF-SGC-LYFSCLCNYP-QPV 275 (381)
Q Consensus 203 ~~v~~n----G~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~-~G~-L~~~~~~~~~-~~~ 275 (381)
.++.++ |.||+..... .|..+|+.+.+.+.+..+.. ....++.. +|. |+++...... ...
T Consensus 140 ~~lavdp~~~g~Lyv~d~~~-------~I~~id~~~~~v~~~~~~~~------~P~~ia~d~~G~~lyvad~~~~~~~~~ 206 (430)
T 3tc9_A 140 VWLSFDPKNHNHLYLVGEQH-------PTRLIDFEKEYVSTVYSGLS------KVRTICWTHEADSMIITNDQNNNDRPN 206 (430)
T ss_dssp CEEEEETTEEEEEEEEEBTE-------EEEEEETTTTEEEEEECCCS------CEEEEEECTTSSEEEEEECCSCTTSEE
T ss_pred CEEEECCCCCCeEEEEeCCC-------cEEEEECCCCEEEEEecCCC------CcceEEEeCCCCEEEEEeCCCCcccce
Confidence 455554 8999987642 79999999988776632111 12344443 565 8887765432 133
Q ss_pred EEEEEC-CceeEEEEecCCCCCeeEEEEEEe-CCCEEEEEecccCCccccCCcEEEEEeCCCCce
Q 016891 276 DIWVLM-GCWTKTFSFPRSVGDYVKALAYSK-SGGKVLVDKFEYGEDEDINRWELFWYDLQNQGA 338 (381)
Q Consensus 276 ~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~-~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~ 338 (381)
.+|... ..|.....+.. . ....-+++.+ +|. |++.. ....+|+.||++++..
T Consensus 207 v~~~~~~g~~~~~~~l~~-~-~~p~giavdp~~g~-lyv~d--------~~~~~V~~~~~~~~~~ 260 (430)
T 3tc9_A 207 NYILTRESGFKVITELTK-G-QNCNGAETHPINGE-LYFNS--------WNAGQVFRYDFTTQET 260 (430)
T ss_dssp EEEEEGGGTSCSEEEEEE-C-SSCCCEEECTTTCC-EEEEE--------TTTTEEEEEETTTTEE
T ss_pred EEEEeCCCceeeeeeecc-C-CCceEEEEeCCCCE-EEEEE--------CCCCEEEEEECCCCcE
Confidence 444444 55553223321 1 1123355666 555 77773 3456788999887766
No 103
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=75.57 E-value=66 Score=31.77 Aligned_cols=120 Identities=11% Similarity=0.228 Sum_probs=64.7
Q ss_pred ECCeeEEEEeeCCCCCCcCEEEEEECCCC---eeeeecCCCCCCCCCceeEEEEEECCeEEEEEecCCCceEEEEEECCc
Q 016891 207 ADGHVHWLVTNNPEDYIENLIIAFNLKSE---EFHEVPLPHLENRNDVLVMFVGNFSGCLYFSCLCNYPQPVDIWVLMGC 283 (381)
Q Consensus 207 ~nG~lYwl~~~~~~~~~~~~i~~fD~~~e---~~~~i~~P~~~~~~~~~~~~L~~~~G~L~~~~~~~~~~~~~iW~l~~~ 283 (381)
-++.+|+++..+. ....|...|+.+. .|+.+ .|.... .. .+...++.|.+....++..++.+|.++..
T Consensus 290 ~g~~l~~~t~~~~---~~~~l~~~d~~~~~~~~~~~l-~~~~~~----~~-~~s~~g~~lv~~~~~~g~~~l~~~d~~g~ 360 (693)
T 3iuj_A 290 KGSTLYLLTNRDA---PNRRLVTVDAANPGPAHWRDL-IPERQQ----VL-TVHSGSGYLFAEYMVDATARVEQFDYEGK 360 (693)
T ss_dssp ETTEEEEEECTTC---TTCEEEEEETTSCCGGGCEEE-ECCCSS----CE-EEEEETTEEEEEEEETTEEEEEEECTTSC
T ss_pred cCCEEEEEECCCC---CCCEEEEEeCCCCCccccEEE-ecCCCC----EE-EEEEECCEEEEEEEECCeeEEEEEECCCC
Confidence 4678888876532 2358999999863 36654 122111 12 44445667777776665323444433344
Q ss_pred eeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCceeeeeEE
Q 016891 284 WTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGAAADQVT 344 (381)
Q Consensus 284 W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~~~~~v~ 344 (381)
+.+...++ ..+ ....+....+++.|++....+ .....++.||+++++. +.+.
T Consensus 361 ~~~~l~~p-~~~-~~~~~~~~~d~~~l~~~~ss~-----~tP~~l~~~d~~~g~~--~~l~ 412 (693)
T 3iuj_A 361 RVREVALP-GLG-SVSGFNGKHDDPALYFGFENY-----AQPPTLYRFEPKSGAI--SLYR 412 (693)
T ss_dssp EEEEECCS-SSS-EEEECCCCTTCSCEEEEEECS-----SSCCEEEEECTTTCCE--EEEE
T ss_pred eeEEeecC-CCc-eEEeeecCCCCCEEEEEecCC-----CCCCEEEEEECCCCeE--EEEE
Confidence 44332222 111 122223334666577662111 2346799999999988 7663
No 104
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=75.50 E-value=44 Score=29.79 Aligned_cols=213 Identities=11% Similarity=-0.011 Sum_probs=106.1
Q ss_pred cccCcEEEEee-CCCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCC
Q 016891 106 DSCNGLIAFKN-DENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRT 184 (381)
Q Consensus 106 ~s~~GLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t 184 (381)
+..+|.|...+ ....++.+++.++....+....... ..++.+|+..+ +++.... ....+++++...
T Consensus 81 d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~-----p~glavd~~~g--~ly~~d~------~~~~I~~~~~dG 147 (349)
T 3v64_C 81 HHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLES-----PGGLAVDWVHD--KLYWTDS------GTSRIEVANLDG 147 (349)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSC-----CCEEEEETTTT--EEEEEET------TTTEEEEEETTS
T ss_pred eccccEEEEEeccCCceEEEecCCCCceEEEeCCCCC-----ccEEEEecCCC--eEEEEcC------CCCeEEEEcCCC
Confidence 34677777766 4567888888877655443222111 12566676555 2222211 124667777665
Q ss_pred CcEEEcccCCCcceecCCCcEEE---CCeeEEEEeeCCCCCCcCEEEEEECCCCeeeeecCCCCCCCCCceeEEEEE--E
Q 016891 185 NSWRRIRVDFPYYILHGWDGTFA---DGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEVPLPHLENRNDVLVMFVGN--F 259 (381)
Q Consensus 185 ~~W~~~~~~~p~~~~~~~~~v~~---nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~--~ 259 (381)
..-+.+. ... .... .++.+ +|.+||...... ..|..+|+....-+.+ ...... ..-.|+. .
T Consensus 148 ~~~~~l~-~~~--l~~P-~~iavdp~~g~ly~td~~~~-----~~I~r~~~dG~~~~~~-~~~~~~----~PnGla~d~~ 213 (349)
T 3v64_C 148 AHRKVLL-WQS--LEKP-RAIALHPMEGTIYWTDWGNT-----PRIEASSMDGSGRRII-ADTHLF----WPNGLTIDYA 213 (349)
T ss_dssp CSCEEEE-CTT--CSCE-EEEEEETTTTEEEEEECSSS-----CEEEEEETTSCSCEES-CCSSCS----CEEEEEEETT
T ss_pred CceEEEE-eCC--CCCc-ceEEEecCcCeEEEeccCCC-----CEEEEEeCCCCCcEEE-EECCCC----CcceEEEeCC
Confidence 4333222 111 1011 44444 589999875441 2799999886544333 111111 1223444 3
Q ss_pred CCeEEEEEecCCCceEEEEEECCceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCcee
Q 016891 260 SGCLYFSCLCNYPQPVDIWVLMGCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGAA 339 (381)
Q Consensus 260 ~G~L~~~~~~~~~~~~~iW~l~~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~~ 339 (381)
+|+||++..... ++....++.+-.+. .+... ...|.++.-.++.|++.. .....|..+|..+++.-
T Consensus 214 ~~~lY~aD~~~~--~I~~~~~dG~~~~~-~~~~~---~~~P~giav~~~~ly~td--------~~~~~V~~~~~~~G~~~ 279 (349)
T 3v64_C 214 GRRMYWVDAKHH--VIERANLDGSHRKA-VISQG---LPHPFAITVFEDSLYWTD--------WHTKSINSANKFTGKNQ 279 (349)
T ss_dssp TTEEEEEETTTT--EEEEEETTSCSCEE-EECSS---CSSEEEEEEETTEEEEEE--------TTTTEEEEEETTTCCSC
T ss_pred CCEEEEEECCCC--EEEEEeCCCCceEE-EEeCC---CCCceEEEEECCEEEEec--------CCCCeEEEEEccCCCcc
Confidence 688998876543 44444444321111 12211 124444433444588883 34567999996555440
Q ss_pred eeeEEEecCCCCceeEEEEeece
Q 016891 340 ADQVTIHGVPQGCRDTIVCVDSL 362 (381)
Q Consensus 340 ~~~v~~~~~~~~~~~~~~y~~sl 362 (381)
+.|. .+.... ..+.+|.+..
T Consensus 280 -~~i~-~~~~~p-~gi~v~~~~~ 299 (349)
T 3v64_C 280 -EIIR-NKLHFP-MDIHTLHPQR 299 (349)
T ss_dssp -EEEE-CSCSCC-CCEEEECGGG
T ss_pred -EEec-cCCCCC-ceEEEEcccc
Confidence 4442 222222 3455555543
No 105
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=75.39 E-value=42 Score=29.42 Aligned_cols=111 Identities=10% Similarity=0.096 Sum_probs=60.9
Q ss_pred CeeEEEEeeCCCCCCcCEEEEEECCCCeeeeecCCCCCCCCCceeEEEE-EECCeEEEEEecCCCceEEEEEEC-CceeE
Q 016891 209 GHVHWLVTNNPEDYIENLIIAFNLKSEEFHEVPLPHLENRNDVLVMFVG-NFSGCLYFSCLCNYPQPVDIWVLM-GCWTK 286 (381)
Q Consensus 209 G~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~L~-~~~G~L~~~~~~~~~~~~~iW~l~-~~W~~ 286 (381)
|.+||....+. .|..+|+.+.+...+..|.. ...+. .-+|++.+.. .. .+.+|..+ .+...
T Consensus 61 ~~l~~~d~~~~------~i~~~d~~~~~~~~~~~~~~-------v~~i~~~~dg~l~v~~--~~--gl~~~d~~~g~~~~ 123 (326)
T 2ghs_A 61 GTAWWFNILER------ELHELHLASGRKTVHALPFM-------GSALAKISDSKQLIAS--DD--GLFLRDTATGVLTL 123 (326)
T ss_dssp TEEEEEEGGGT------EEEEEETTTTEEEEEECSSC-------EEEEEEEETTEEEEEE--TT--EEEEEETTTCCEEE
T ss_pred CEEEEEECCCC------EEEEEECCCCcEEEEECCCc-------ceEEEEeCCCeEEEEE--CC--CEEEEECCCCcEEE
Confidence 78999876543 79999999888776655432 12233 3478887765 22 34444444 45443
Q ss_pred EEEecCC-CCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCceeeeeE
Q 016891 287 TFSFPRS-VGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGAAADQV 343 (381)
Q Consensus 287 ~~~i~~~-~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~~~~~v 343 (381)
....+.. ......-+.+.++|. +++...... .......|+.|| ++++ +.+
T Consensus 124 ~~~~~~~~~~~~~~~i~~d~~G~-l~v~~~~~~--~~~~~~~l~~~~--~g~~--~~~ 174 (326)
T 2ghs_A 124 HAELESDLPGNRSNDGRMHPSGA-LWIGTMGRK--AETGAGSIYHVA--KGKV--TKL 174 (326)
T ss_dssp EECSSTTCTTEEEEEEEECTTSC-EEEEEEETT--CCTTCEEEEEEE--TTEE--EEE
T ss_pred EeeCCCCCCCCCCCCEEECCCCC-EEEEeCCCc--CCCCceEEEEEe--CCcE--EEe
Confidence 3322211 112344456666777 776631000 000134688888 5666 554
No 106
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=75.36 E-value=40 Score=29.15 Aligned_cols=112 Identities=8% Similarity=0.002 Sum_probs=67.3
Q ss_pred EEECCeeEEEEeeCCCCCCcCEEEEEECCCCee-eeecCCCCCCCCCceeEEEEEECCeEEEEEecCCCceEEEEEEC-C
Q 016891 205 TFADGHVHWLVTNNPEDYIENLIIAFNLKSEEF-HEVPLPHLENRNDVLVMFVGNFSGCLYFSCLCNYPQPVDIWVLM-G 282 (381)
Q Consensus 205 v~~nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~-~~i~~P~~~~~~~~~~~~L~~~~G~L~~~~~~~~~~~~~iW~l~-~ 282 (381)
...++.||.+..... .+.+||..+-+- ..++.+... ..|+.-+++|++... .. .|++++ .
T Consensus 102 t~~g~~Ly~ltw~~~------~v~V~D~~Tl~~~~ti~~~~eG-------wGLt~Dg~~L~vSdG-s~----~l~~iDp~ 163 (268)
T 3nok_A 102 ASDGERLYQLTWTEG------LLFTWSGMPPQRERTTRYSGEG-------WGLCYWNGKLVRSDG-GT----MLTFHEPD 163 (268)
T ss_dssp EECSSCEEEEESSSC------EEEEEETTTTEEEEEEECSSCC-------CCEEEETTEEEEECS-SS----EEEEECTT
T ss_pred EEeCCEEEEEEccCC------EEEEEECCcCcEEEEEeCCCce-------eEEecCCCEEEEECC-CC----EEEEEcCC
Confidence 445678998876553 899999987544 455655332 235555677877753 22 477777 4
Q ss_pred ceeEEEEec-CCCC---CeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCceeeeeEEE
Q 016891 283 CWTKTFSFP-RSVG---DYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGAAADQVTI 345 (381)
Q Consensus 283 ~W~~~~~i~-~~~~---~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~~~~~v~~ 345 (381)
.=..+.+|. ..-+ ....-+... +|. |+... ...+.|...|++|+++. +.|.+
T Consensus 164 T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~-lyanv--------w~s~~I~vIDp~TG~V~-~~Idl 219 (268)
T 3nok_A 164 GFALVGAVQVKLRGQPVELINELECA-NGV-IYANI--------WHSSDVLEIDPATGTVV-GVIDA 219 (268)
T ss_dssp TCCEEEEEECEETTEECCCEEEEEEE-TTE-EEEEE--------TTCSEEEEECTTTCBEE-EEEEC
T ss_pred CCeEEEEEEeCCCCcccccccccEEe-CCE-EEEEE--------CCCCeEEEEeCCCCcEE-EEEEC
Confidence 445555555 1111 111112222 665 88774 34568999999999982 45544
No 107
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=75.36 E-value=37 Score=28.84 Aligned_cols=140 Identities=14% Similarity=0.006 Sum_probs=81.2
Q ss_pred eEEEEEEcCCCcEEEcccCCCcceecCC-CcEEECCeeEEEEeeCCCCCCcCEEEEEECCCCee-eeecCCCCCCCCCce
Q 016891 175 TEIAVYSLRTNSWRRIRVDFPYYILHGW-DGTFADGHVHWLVTNNPEDYIENLIIAFNLKSEEF-HEVPLPHLENRNDVL 252 (381)
Q Consensus 175 ~~~~vyss~t~~W~~~~~~~p~~~~~~~-~~v~~nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~-~~i~~P~~~~~~~~~ 252 (381)
..+.+++.+++.=.... .++... .. .-...++.||.+..... .+.+||..+-+- ..++.|...
T Consensus 43 S~v~~vD~~tgkv~~~~-~l~~~~--fgeGi~~~~~~ly~ltw~~~------~v~v~D~~tl~~~~ti~~~~~G------ 107 (243)
T 3mbr_X 43 SSVRKVDLETGRILQRA-EVPPPY--FGAGIVAWRDRLIQLTWRNH------EGFVYDLATLTPRARFRYPGEG------ 107 (243)
T ss_dssp CEEEEEETTTCCEEEEE-ECCTTC--CEEEEEEETTEEEEEESSSS------EEEEEETTTTEEEEEEECSSCC------
T ss_pred ceEEEEECCCCCEEEEE-eCCCCc--ceeEEEEeCCEEEEEEeeCC------EEEEEECCcCcEEEEEeCCCCc------
Confidence 57888999887543322 222111 11 23456889999986553 899999987544 445655321
Q ss_pred eEEEEEECCeEEEEEecCCCceEEEEEEC-CceeEEEEecC-CCC---CeeEEEEEEeCCCEEEEEecccCCccccCCcE
Q 016891 253 VMFVGNFSGCLYFSCLCNYPQPVDIWVLM-GCWTKTFSFPR-SVG---DYVKALAYSKSGGKVLVDKFEYGEDEDINRWE 327 (381)
Q Consensus 253 ~~~L~~~~G~L~~~~~~~~~~~~~iW~l~-~~W~~~~~i~~-~~~---~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~ 327 (381)
..|+.-+++|++... .. .|++++ ..=..+.+|.- .-+ ....-+- ..+|+ |+... ...+.
T Consensus 108 -wglt~dg~~L~vSdg-s~----~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe-~~~G~-lyanv--------w~s~~ 171 (243)
T 3mbr_X 108 -WALTSDDSHLYMSDG-TA----VIRKLDPDTLQQVGSIKVTAGGRPLDNLNELE-WVNGE-LLANV--------WLTSR 171 (243)
T ss_dssp -CEEEECSSCEEEECS-SS----EEEEECTTTCCEEEEEECEETTEECCCEEEEE-EETTE-EEEEE--------TTTTE
T ss_pred -eEEeeCCCEEEEECC-CC----eEEEEeCCCCeEEEEEEEccCCcccccceeeE-EeCCE-EEEEE--------CCCCe
Confidence 245555667888753 22 377888 44445555551 111 1111122 22666 88774 24568
Q ss_pred EEEEeCCCCceeeeeEEEe
Q 016891 328 LFWYDLQNQGAAADQVTIH 346 (381)
Q Consensus 328 l~~yd~~t~~~~~~~v~~~ 346 (381)
|.+.|++|+++. ..|.+.
T Consensus 172 I~vIDp~tG~V~-~~idl~ 189 (243)
T 3mbr_X 172 IARIDPASGKVV-AWIDLQ 189 (243)
T ss_dssp EEEECTTTCBEE-EEEECG
T ss_pred EEEEECCCCCEE-EEEECC
Confidence 999999999982 445443
No 108
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=75.22 E-value=35 Score=28.43 Aligned_cols=186 Identities=10% Similarity=0.067 Sum_probs=94.1
Q ss_pred CCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCC-CcEEEcccCCCc
Q 016891 118 ENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRT-NSWRRIRVDFPY 196 (381)
Q Consensus 118 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t-~~W~~~~~~~p~ 196 (381)
...++++|+.+++...+..... ....+.+.|.. .+-++ . . + ..+.+++..+ +....+. ..+.
T Consensus 21 ~~~i~~~d~~~~~~~~~~~~~~------~v~~~~~spdg-~~l~~-~-~---~----~~i~~~d~~~~~~~~~~~-~~~~ 83 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMRVVWQTPE------LFEAPNWSPDG-KYLLL-N-S---E----GLLYRLSLAGDPSPEKVD-TGFA 83 (297)
T ss_dssp CEEEEEEETTTTEEEEEEEESS------CCEEEEECTTS-SEEEE-E-E---T----TEEEEEESSSCCSCEECC-CTTC
T ss_pred ceeEEEEeCCCCceeeeccCCc------ceEeeEECCCC-CEEEE-E-c---C----CeEEEEeCCCCCCceEec-cccc
Confidence 4578999999988776654321 12234444433 33222 1 1 1 4788999988 7766554 2111
Q ss_pred ceecCCCcEE--ECCeeEEEEeeCCCCCCcCEEEEEECCCCeeeeecCCCCCCCCCceeEEEEEE-CCeE-EEEEecCCC
Q 016891 197 YILHGWDGTF--ADGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEVPLPHLENRNDVLVMFVGNF-SGCL-YFSCLCNYP 272 (381)
Q Consensus 197 ~~~~~~~~v~--~nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~-~G~L-~~~~~~~~~ 272 (381)
... . ..+. -+|.......... .....|..+|+.+.....+..... ...+.-. +|+. ++....++
T Consensus 84 ~~~-~-~~~~~spdg~~l~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~-------~~~~~~spdg~~l~~~~~~~~- 151 (297)
T 2ojh_A 84 TIC-N-NDHGISPDGALYAISDKVE--FGKSAIYLLPSTGGTPRLMTKNLP-------SYWHGWSPDGKSFTYCGIRDQ- 151 (297)
T ss_dssp CCB-C-SCCEECTTSSEEEEEECTT--TSSCEEEEEETTCCCCEECCSSSS-------EEEEEECTTSSEEEEEEEETT-
T ss_pred ccc-c-cceEECCCCCEEEEEEeCC--CCcceEEEEECCCCceEEeecCCC-------ccceEECCCCCEEEEEECCCC-
Confidence 000 0 1222 2454333333111 012378888887766554432211 1122323 5654 43444444
Q ss_pred ceEEEEEEC-CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCceeeeeE
Q 016891 273 QPVDIWVLM-GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGAAADQV 343 (381)
Q Consensus 273 ~~~~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~~~~~v 343 (381)
.+.||.++ ..-. ...+.. ......-+.+.++|..|++... . .....++.+++.++.. +.+
T Consensus 152 -~~~l~~~~~~~~~-~~~~~~-~~~~~~~~~~s~dg~~l~~~~~-----~-~~~~~i~~~~~~~~~~--~~~ 212 (297)
T 2ojh_A 152 -VFDIYSMDIDSGV-ETRLTH-GEGRNDGPDYSPDGRWIYFNSS-----R-TGQMQIWRVRVDGSSV--ERI 212 (297)
T ss_dssp -EEEEEEEETTTCC-EEECCC-SSSCEEEEEECTTSSEEEEEEC-----T-TSSCEEEEEETTSSCE--EEC
T ss_pred -ceEEEEEECCCCc-ceEccc-CCCccccceECCCCCEEEEEec-----C-CCCccEEEECCCCCCc--EEE
Confidence 78999987 2211 122221 1123455666778886665520 0 1234688888777777 665
No 109
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=74.92 E-value=42 Score=29.17 Aligned_cols=94 Identities=13% Similarity=0.064 Sum_probs=54.9
Q ss_pred EEEEEECCCCeee-eecCCCCCCCCCceeEEEEEE--CCeEEEEEecCCCceEEEEEEC-CceeEEEEec--CCCCCeeE
Q 016891 226 LIIAFNLKSEEFH-EVPLPHLENRNDVLVMFVGNF--SGCLYFSCLCNYPQPVDIWVLM-GCWTKTFSFP--RSVGDYVK 299 (381)
Q Consensus 226 ~i~~fD~~~e~~~-~i~~P~~~~~~~~~~~~L~~~--~G~L~~~~~~~~~~~~~iW~l~-~~W~~~~~i~--~~~~~~~~ 299 (381)
.|..+|+.+.+.. .+.... .....+.-. +|.+.+....++ .+.||.++ .+ ....+. ........
T Consensus 96 ~i~v~d~~~~~~~~~~~~~~------~~i~~~~~~~~~~~~l~s~~~dg--~i~iwd~~~~~--~~~~~~~~~~~~~~v~ 165 (366)
T 3k26_A 96 IIRIINPITMQCIKHYVGHG------NAINELKFHPRDPNLLLSVSKDH--ALRLWNIQTDT--LVAIFGGVEGHRDEVL 165 (366)
T ss_dssp EEEEECTTTCCEEEEEESCC------SCEEEEEECSSCTTEEEEEETTS--CEEEEETTTTE--EEEEECSTTSCSSCEE
T ss_pred EEEEEEchhceEeeeecCCC------CcEEEEEECCCCCCEEEEEeCCC--eEEEEEeecCe--EEEEecccccccCcee
Confidence 7889998865442 222111 112233332 567666666655 79999988 43 223332 11223456
Q ss_pred EEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCce
Q 016891 300 ALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGA 338 (381)
Q Consensus 300 ~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~ 338 (381)
-+.+.+++..|+.. ..+..+.+||+++++.
T Consensus 166 ~~~~~~~~~~l~~~---------~~dg~i~i~d~~~~~~ 195 (366)
T 3k26_A 166 SADYDLLGEKIMSC---------GMDHSLKLWRINSKRM 195 (366)
T ss_dssp EEEECTTSSEEEEE---------ETTSCEEEEESCSHHH
T ss_pred EEEECCCCCEEEEe---------cCCCCEEEEECCCCcc
Confidence 67777888845544 3556799999998764
No 110
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=74.88 E-value=73 Score=31.96 Aligned_cols=196 Identities=8% Similarity=0.064 Sum_probs=100.2
Q ss_pred cCcE-EEEeeCCCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCCc
Q 016891 108 CNGL-IAFKNDENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTNS 186 (381)
Q Consensus 108 ~~GL-l~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~ 186 (381)
.+|- |.+......++++||.|+++..++....... ......+..|.. +. +.+... ..+.+|+.+++.
T Consensus 415 ~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~-~~~v~~i~~d~~-g~---lwigt~-------~Gl~~~~~~~~~ 482 (795)
T 4a2l_A 415 EKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLV-NENVYAILPDGE-GN---LWLGTL-------SALVRFNPEQRS 482 (795)
T ss_dssp TTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCS-CSCEEEEEECSS-SC---EEEEES-------SCEEEEETTTTE
T ss_pred CCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcC-CCeeEEEEECCC-CC---EEEEec-------CceeEEeCCCCe
Confidence 3554 5555545678888999888877764221111 112333433432 21 233221 347789999999
Q ss_pred EEEcccCC--CcceecCC-CcEEE--CCeeEEEEeeCCCCCCcCEEEEEECCCCeeeeec-CCCCCCCCCceeEEEEE-E
Q 016891 187 WRRIRVDF--PYYILHGW-DGTFA--DGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEVP-LPHLENRNDVLVMFVGN-F 259 (381)
Q Consensus 187 W~~~~~~~--p~~~~~~~-~~v~~--nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~-~P~~~~~~~~~~~~L~~-~ 259 (381)
|+... .. +....... ..++. +|.+ |++... .|..+|..++++ .+. .+............+.+ .
T Consensus 483 ~~~~~-~~~~~~~~~~~~i~~i~~d~~g~l-Wigt~~-------Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~ 552 (795)
T 4a2l_A 483 FTTIE-KEKDGTPVVSKQITTLFRDSHKRL-WIGGEE-------GLSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEAS 552 (795)
T ss_dssp EEECC-BCTTCCBCCCCCEEEEEECTTCCE-EEEESS-------CEEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECT
T ss_pred EEEcc-ccccccccCCceEEEEEECCCCCE-EEEeCC-------ceEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECC
Confidence 98775 22 11111111 23333 4555 444433 488999988887 432 11110000112334554 3
Q ss_pred CCeEEEEEecCCCceEEEEEEC-CceeEEEEec-CCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCc
Q 016891 260 SGCLYFSCLCNYPQPVDIWVLM-GCWTKTFSFP-RSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQG 337 (381)
Q Consensus 260 ~G~L~~~~~~~~~~~~~iW~l~-~~W~~~~~i~-~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~ 337 (381)
+|.|.+.... + +..|..+ ..+... ... ..+.....-+....+|. |.+. . ...+..||+++++
T Consensus 553 ~g~lWigT~~-G---l~~~d~~~~~~~~~-~~~~gl~~~~i~~i~~d~~g~-lWi~---------t-~~Gl~~~~~~~~~ 616 (795)
T 4a2l_A 553 NGIIWVGTRE-G---FYCFNEKDKQIKRY-NTTNGLPNNVVYGILEDSFGR-LWLS---------T-NRGISCFNPETEK 616 (795)
T ss_dssp TSCEEEEESS-C---EEEEETTTTEEEEE-CGGGTCSCSCEEEEEECTTSC-EEEE---------E-TTEEEEEETTTTE
T ss_pred CCCEEEEeCC-C---ceeECCCCCcEEEe-CCCCCCchhheEEEEECCCCC-EEEE---------c-CCceEEEcCCCCc
Confidence 6888877653 2 3333333 443322 111 12222233333344566 8877 3 4579999999999
Q ss_pred eeeeeE
Q 016891 338 AAADQV 343 (381)
Q Consensus 338 ~~~~~v 343 (381)
+ +..
T Consensus 617 ~--~~~ 620 (795)
T 4a2l_A 617 F--RNF 620 (795)
T ss_dssp E--EEE
T ss_pred E--EEc
Confidence 8 766
No 111
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=74.77 E-value=42 Score=29.18 Aligned_cols=205 Identities=7% Similarity=-0.020 Sum_probs=96.4
Q ss_pred EEEeeCCCcEEEEccCCcceeeCCCCCCCC--------------CCceEEEEEeEECCCCCEEEEEEEEEeecCccceEE
Q 016891 112 IAFKNDENGIALWNPSTEEHLILPKFWGDL--------------KDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEI 177 (381)
Q Consensus 112 l~~~~~~~~~~V~NP~T~~~~~LP~~~~~~--------------~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~ 177 (381)
+.+......++.+||.+++...+....... .......++.+|+..+. ++.. . .. ..+
T Consensus 33 l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~--l~v~-d---~~---~~i 103 (322)
T 2fp8_A 33 FYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ--LYIV-D---CY---YHL 103 (322)
T ss_dssp EEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE--EEEE-E---TT---TEE
T ss_pred EEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCc--EEEE-E---CC---CCE
Confidence 444444567788888887665443111000 00012345666653332 2222 1 01 235
Q ss_pred EEEEcCCCcEEEcccCCCcceecCC-CcEEE---CCeeEEEEeeCCC-----------CCCcCEEEEEECCCCeeeee--
Q 016891 178 AVYSLRTNSWRRIRVDFPYYILHGW-DGTFA---DGHVHWLVTNNPE-----------DYIENLIIAFNLKSEEFHEV-- 240 (381)
Q Consensus 178 ~vyss~t~~W~~~~~~~p~~~~~~~-~~v~~---nG~lYwl~~~~~~-----------~~~~~~i~~fD~~~e~~~~i-- 240 (381)
.+|+..++..+.+. .......... +.+.+ +|.+|+....... ......|..+|..+.+...+
T Consensus 104 ~~~d~~~g~~~~~~-~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~ 182 (322)
T 2fp8_A 104 SVVGSEGGHATQLA-TSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLK 182 (322)
T ss_dssp EEECTTCEECEEEE-SEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEE
T ss_pred EEEeCCCCEEEEec-ccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEecc
Confidence 56666665554443 1111011111 44554 6788886533100 00113699999987766544
Q ss_pred --cCCCCCCCCCceeEEEEEE-CCe-EEEEEecCCCceEEEEEEC----CceeEEEEecCCCCCeeEEEEEEeCCCEEEE
Q 016891 241 --PLPHLENRNDVLVMFVGNF-SGC-LYFSCLCNYPQPVDIWVLM----GCWTKTFSFPRSVGDYVKALAYSKSGGKVLV 312 (381)
Q Consensus 241 --~~P~~~~~~~~~~~~L~~~-~G~-L~~~~~~~~~~~~~iW~l~----~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l 312 (381)
..|. .++.. +|+ |+++..... ++.++.++ ........+ .+ ..-+++..+|. |++
T Consensus 183 ~~~~p~----------gia~~~dg~~lyv~d~~~~--~I~~~~~~~~~~~~~~~~~~~---~g--P~gi~~d~~G~-l~v 244 (322)
T 2fp8_A 183 ELHVPG----------GAEVSADSSFVLVAEFLSH--QIVKYWLEGPKKGTAEVLVKI---PN--PGNIKRNADGH-FWV 244 (322)
T ss_dssp EESCCC----------EEEECTTSSEEEEEEGGGT--EEEEEESSSTTTTCEEEEEEC---SS--EEEEEECTTSC-EEE
T ss_pred CCccCc----------ceEECCCCCEEEEEeCCCC--eEEEEECCCCcCCccceEEeC---CC--CCCeEECCCCC-EEE
Confidence 1221 23333 454 666655433 45454444 233332222 22 33455566777 888
Q ss_pred EecccCC--ccccCCcEEEEEeCCCCceeeeeEEEe
Q 016891 313 DKFEYGE--DEDINRWELFWYDLQNQGAAADQVTIH 346 (381)
Q Consensus 313 ~~~~~~~--~~~~~~~~l~~yd~~t~~~~~~~v~~~ 346 (381)
..+..+. ........++.||++.+.+ +.+...
T Consensus 245 a~~~~~~~~~~~~~~~~v~~~d~~G~~~--~~~~~~ 278 (322)
T 2fp8_A 245 SSSEELDGNMHGRVDPKGIKFDEFGNIL--EVIPLP 278 (322)
T ss_dssp EEEEETTSSTTSCEEEEEEEECTTSCEE--EEEECC
T ss_pred EecCcccccccCCCccEEEEECCCCCEE--EEEECC
Confidence 7311000 0000024699999988777 777554
No 112
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=74.53 E-value=46 Score=29.49 Aligned_cols=197 Identities=14% Similarity=0.057 Sum_probs=96.5
Q ss_pred cCcEEEEeeCCCcEEEEccCCcceeeCCCCCC-CCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCCc
Q 016891 108 CNGLIAFKNDENGIALWNPSTEEHLILPKFWG-DLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTNS 186 (381)
Q Consensus 108 ~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~-~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~ 186 (381)
.++.|+....+..+.|||..+++......... .+. .....+.+.+. +.+ ++ ... . ...+.+++.+++.
T Consensus 92 ~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~--~~V~~v~~spd-g~~-l~-sgs--~----d~~i~iwd~~~~~ 160 (344)
T 4gqb_B 92 GERGILVASDSGAVELWELDENETLIVSKFCKYEHD--DIVSTVSVLSS-GTQ-AV-SGS--K----DICIKVWDLAQQV 160 (344)
T ss_dssp TTTEEEEEETTSEEEEEEECTTSSCEEEEEEEECCS--SCEEEEEECTT-SSE-EE-EEE--T----TSCEEEEETTTTE
T ss_pred CCCeEEEEECCCEEEEEeccCCCceeEeeccccCCC--CCEEEEEECCC-CCE-EE-EEe--C----CCeEEEEECCCCc
Confidence 35666655567789999999887554322111 111 12334555543 222 22 111 1 1457788877763
Q ss_pred EEEcccCCCcceecCCCcEEE--CCeeEEEEeeCCCCCCcCEEEEEECCCCeeee-ecCCCCCCCCCceeEEEEEE--CC
Q 016891 187 WRRIRVDFPYYILHGWDGTFA--DGHVHWLVTNNPEDYIENLIIAFNLKSEEFHE-VPLPHLENRNDVLVMFVGNF--SG 261 (381)
Q Consensus 187 W~~~~~~~p~~~~~~~~~v~~--nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~-i~~P~~~~~~~~~~~~L~~~--~G 261 (381)
=...-....... ..+.+ +|.-+.++...+ ..|..+|+.+.+-.. +..+.... ....+.-. ++
T Consensus 161 ~~~~~~~h~~~V----~~~~~~~~~~~~l~s~s~D-----~~v~iwd~~~~~~~~~~~~~~~~~----~~~~~~~~p~~~ 227 (344)
T 4gqb_B 161 VLSSYRAHAAQV----TCVAASPHKDSVFLSCSED-----NRILLWDTRCPKPASQIGCSAPGY----LPTSLAWHPQQS 227 (344)
T ss_dssp EEEEECCCSSCE----EEEEECSSCTTEEEEEETT-----SCEEEEETTSSSCEEECC----CC----CEEEEEECSSCT
T ss_pred EEEEEcCcCCce----EEEEecCCCCCceeeeccc-----cccccccccccceeeeeecceeec----cceeeeecCCCC
Confidence 221110100000 22222 333223332221 168899998765432 22221110 12223332 45
Q ss_pred eEEEEEecCCCceEEEEEEC-CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCceee
Q 016891 262 CLYFSCLCNYPQPVDIWVLM-GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGAAA 340 (381)
Q Consensus 262 ~L~~~~~~~~~~~~~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~~~ 340 (381)
.+.+....++ .+.||-++ .+ .+..+.. ......-+++.++|..+++.. ..+..|.+||.+++++
T Consensus 228 ~~l~sg~~dg--~v~~wd~~~~~--~~~~~~~-h~~~v~~v~fsp~g~~~lasg--------s~D~~i~vwd~~~~~~-- 292 (344)
T 4gqb_B 228 EVFVFGDENG--TVSLVDTKSTS--CVLSSAV-HSQCVTGLVFSPHSVPFLASL--------SEDCSLAVLDSSLSEL-- 292 (344)
T ss_dssp TEEEEEETTS--EEEEEESCC----CCEEEEC-CSSCEEEEEECSSSSCCEEEE--------ETTSCEEEECTTCCEE--
T ss_pred cceEEeccCC--cEEEEECCCCc--EEEEEcC-CCCCEEEEEEccCCCeEEEEE--------eCCCeEEEEECCCCcE--
Confidence 6666666555 79999887 22 2223321 113355667777776455542 3455699999999887
Q ss_pred eeE
Q 016891 341 DQV 343 (381)
Q Consensus 341 ~~v 343 (381)
.+.
T Consensus 293 ~~~ 295 (344)
T 4gqb_B 293 FRS 295 (344)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 113
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=73.84 E-value=38 Score=28.19 Aligned_cols=192 Identities=13% Similarity=0.012 Sum_probs=92.3
Q ss_pred EEcccCcEEEE-ee-CCCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEE
Q 016891 104 IIDSCNGLIAF-KN-DENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYS 181 (381)
Q Consensus 104 ~~~s~~GLl~~-~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vys 181 (381)
+.-+.+|-|.+ .+ ....+.++|+.++....++...... ..++.+|+. +. +. +... ...+.+|+
T Consensus 29 i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-----p~~i~~~~~-g~--l~-v~~~------~~~i~~~d 93 (270)
T 1rwi_B 29 VAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQ-----PQGLAVDGA-GT--VY-VTDF------NNRVVTLA 93 (270)
T ss_dssp EEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCS-----CCCEEECTT-CC--EE-EEET------TTEEEEEC
T ss_pred eEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCC-----cceeEECCC-CC--EE-EEcC------CCEEEEEe
Confidence 33344565655 43 4567888999887766655332111 123444543 22 22 2210 13567777
Q ss_pred cCCCcEEEcccCCCcceecCCCcEEE--CCeeEEEEeeCCCCCCcCEEEEEECCCCeeeeecCCCCCCCCCceeEEEEEE
Q 016891 182 LRTNSWRRIRVDFPYYILHGWDGTFA--DGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEVPLPHLENRNDVLVMFVGNF 259 (381)
Q Consensus 182 s~t~~W~~~~~~~p~~~~~~~~~v~~--nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~ 259 (381)
..++.-.... ..... ...++.+ +|.+|+...... .|..+|..+......... ... ....+...
T Consensus 94 ~~~~~~~~~~-~~~~~---~p~~i~~~~~g~l~v~~~~~~------~i~~~~~~~~~~~~~~~~-~~~----~p~~i~~~ 158 (270)
T 1rwi_B 94 AGSNNQTVLP-FDGLN---YPEGLAVDTQGAVYVADRGNN------RVVKLAAGSKTQTVLPFT-GLN----DPDGVAVD 158 (270)
T ss_dssp TTCSCCEECC-CCSCS---SEEEEEECTTCCEEEEEGGGT------EEEEECTTCCSCEECCCC-SCC----SCCCEEEC
T ss_pred CCCceEeeee-cCCcC---CCcceEECCCCCEEEEECCCC------EEEEEECCCceeEeeccc-cCC----CceeEEEe
Confidence 7665444332 11100 0034444 588877654432 688888776544332111 110 01123333
Q ss_pred -CCeEEEEEecCCCceEEEEEECCceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCce
Q 016891 260 -SGCLYFSCLCNYPQPVDIWVLMGCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGA 338 (381)
Q Consensus 260 -~G~L~~~~~~~~~~~~~iW~l~~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~ 338 (381)
+|+|++...... .+.+|..+.. .......... ....-+++.++|. |++.. .....|..||++++..
T Consensus 159 ~~g~l~v~~~~~~--~i~~~~~~~~-~~~~~~~~~~-~~p~~i~~d~~g~-l~v~~--------~~~~~v~~~~~~~~~~ 225 (270)
T 1rwi_B 159 NSGNVYVTDTDNN--RVVKLEAESN-NQVVLPFTDI-TAPWGIAVDEAGT-VYVTE--------HNTNQVVKLLAGSTTS 225 (270)
T ss_dssp TTCCEEEEEGGGT--EEEEECTTTC-CEEECCCSSC-CSEEEEEECTTCC-EEEEE--------TTTSCEEEECTTCSCC
T ss_pred CCCCEEEEECCCC--EEEEEecCCC-ceEeecccCC-CCceEEEECCCCC-EEEEE--------CCCCcEEEEcCCCCcc
Confidence 688877766544 5555544421 1111111111 2334456666775 88873 3355799999988776
No 114
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=73.63 E-value=22 Score=30.75 Aligned_cols=118 Identities=5% Similarity=-0.054 Sum_probs=59.4
Q ss_pred CC-eeEEEEeeCCCCCCcCEEEEEECCCCeeeeecCCCCCCCCCceeEEEEE-ECCeEEEEEecCCCceEEEEEECCcee
Q 016891 208 DG-HVHWLVTNNPEDYIENLIIAFNLKSEEFHEVPLPHLENRNDVLVMFVGN-FSGCLYFSCLCNYPQPVDIWVLMGCWT 285 (381)
Q Consensus 208 nG-~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~-~~G~L~~~~~~~~~~~~~iW~l~~~W~ 285 (381)
+| .|||...... .|..+|.. .+.+.+..|... ...+.. -+|+|+++..... .+.+|..+.+..
T Consensus 55 ~g~~l~~~d~~~~------~i~~~~~~-g~~~~~~~~~~~------~~gl~~d~dG~l~v~~~~~~--~v~~~~~~g~~~ 119 (305)
T 3dr2_A 55 AQRTLVWSDLVGR------RVLGWRED-GTVDVLLDATAF------TNGNAVDAQQRLVHCEHGRR--AITRSDADGQAH 119 (305)
T ss_dssp GGTEEEEEETTTT------EEEEEETT-SCEEEEEESCSC------EEEEEECTTSCEEEEETTTT--EEEEECTTSCEE
T ss_pred CCCEEEEEECCCC------EEEEEeCC-CCEEEEeCCCCc------cceeeECCCCCEEEEECCCC--EEEEECCCCCEE
Confidence 34 4899876543 78889984 445555433321 123333 3688776654333 444443333332
Q ss_pred EEEEecCC-CCCeeEEEEEEeCCCEEEEEecccCCc---------cccCCcEEEEEeCCCCceeeeeE
Q 016891 286 KTFSFPRS-VGDYVKALAYSKSGGKVLVDKFEYGED---------EDINRWELFWYDLQNQGAAADQV 343 (381)
Q Consensus 286 ~~~~i~~~-~~~~~~~~~~~~~g~~i~l~~~~~~~~---------~~~~~~~l~~yd~~t~~~~~~~v 343 (381)
........ ......-+.+.++|. |++....+|-. .......|+.||++++++ +.+
T Consensus 120 ~~~~~~~~~~~~~~~~i~~d~dG~-l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~--~~~ 184 (305)
T 3dr2_A 120 LLVGRYAGKRLNSPNDLIVARDGA-IWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPL--QRM 184 (305)
T ss_dssp EEECEETTEECSCCCCEEECTTSC-EEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCC--EEE
T ss_pred EEEeccCCCccCCCCCEEECCCCC-EEEeCcCCCccccccccccccccCCCeEEEEcCCCCcE--EEE
Confidence 22111110 001123356667887 88851111100 001135699999998888 665
No 115
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=73.55 E-value=45 Score=28.92 Aligned_cols=186 Identities=8% Similarity=-0.074 Sum_probs=90.2
Q ss_pred CCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCCcEE-EcccCCCc
Q 016891 118 ENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTNSWR-RIRVDFPY 196 (381)
Q Consensus 118 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W~-~~~~~~p~ 196 (381)
...+.++|+.|++....-+.... ..++.+++..+ + ++.... ....+.+|+.+++.-. .+......
T Consensus 68 ~~~v~~~d~~~~~~~~~~~~~~~------~~~~~~s~dg~-~-l~v~~~------~~~~v~~~d~~~~~~~~~~~~~~~~ 133 (353)
T 3vgz_A 68 GGVVYRLDPVTLEVTQAIHNDLK------PFGATINNTTQ-T-LWFGNT------VNSAVTAIDAKTGEVKGRLVLDDRK 133 (353)
T ss_dssp SEEEEEECTTTCCEEEEEEESSC------CCSEEEETTTT-E-EEEEET------TTTEEEEEETTTCCEEEEEESCCCC
T ss_pred CccEEEEcCCCCeEEEEEecCCC------cceEEECCCCC-E-EEEEec------CCCEEEEEeCCCCeeEEEEecCCCc
Confidence 34789999998876543211111 11234444333 2 222211 1146788888887532 22211000
Q ss_pred c---eecCC-CcEEE--CCe-eEEEEeeCCCCCCcCEEEEEECCCCeeee-ecCCCCCCCCCceeEEEEEECCeEEEEEe
Q 016891 197 Y---ILHGW-DGTFA--DGH-VHWLVTNNPEDYIENLIIAFNLKSEEFHE-VPLPHLENRNDVLVMFVGNFSGCLYFSCL 268 (381)
Q Consensus 197 ~---~~~~~-~~v~~--nG~-lYwl~~~~~~~~~~~~i~~fD~~~e~~~~-i~~P~~~~~~~~~~~~L~~~~G~L~~~~~ 268 (381)
. ..... .++.+ +|. +|....... ..|..+|+.+.+... ++..... ...+.+ .-+|+..++..
T Consensus 134 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~-----~~i~~~d~~~~~~~~~~~~~~~~----~~~~~~-s~dg~~l~~~~ 203 (353)
T 3vgz_A 134 RTEEVRPLQPRELVADDATNTVYISGIGKE-----SVIWVVDGGNIKLKTAIQNTGKM----STGLAL-DSEGKRLYTTN 203 (353)
T ss_dssp CCSSCCCCEEEEEEEETTTTEEEEEEESSS-----CEEEEEETTTTEEEEEECCCCTT----CCCCEE-ETTTTEEEEEC
T ss_pred cccccCCCCCceEEECCCCCEEEEEecCCC-----ceEEEEcCCCCceEEEecCCCCc----cceEEE-CCCCCEEEEEc
Confidence 0 00000 22333 554 555543221 279999998776533 3322111 011122 23554333333
Q ss_pred cCCCceEEEEEECCceeEEEEec--C-CCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCce
Q 016891 269 CNYPQPVDIWVLMGCWTKTFSFP--R-SVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGA 338 (381)
Q Consensus 269 ~~~~~~~~iW~l~~~W~~~~~i~--~-~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~ 338 (381)
.++ .+.+|.++ .......+. . .......-+++.++|+.+++.. .....+.+||+++++.
T Consensus 204 ~~~--~i~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~--------~~~~~v~~~d~~~~~~ 265 (353)
T 3vgz_A 204 ADG--ELITIDTA-DNKILSRKKLLDDGKEHFFINISLDTARQRAFITD--------SKAAEVLVVDTRNGNI 265 (353)
T ss_dssp TTS--EEEEEETT-TTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEE--------SSSSEEEEEETTTCCE
T ss_pred CCC--eEEEEECC-CCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEe--------CCCCEEEEEECCCCcE
Confidence 333 66666665 222222332 1 1223344577888898777763 3446799999998887
No 116
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=73.17 E-value=51 Score=29.38 Aligned_cols=66 Identities=12% Similarity=0.182 Sum_probs=38.1
Q ss_pred CeEEEEEecCCCceEEEEEEC-CceeEEEEecCC-C--CCeeEEEEEEeCCCEEEEEecccCCccccCCc---EEEEEeC
Q 016891 261 GCLYFSCLCNYPQPVDIWVLM-GCWTKTFSFPRS-V--GDYVKALAYSKSGGKVLVDKFEYGEDEDINRW---ELFWYDL 333 (381)
Q Consensus 261 G~L~~~~~~~~~~~~~iW~l~-~~W~~~~~i~~~-~--~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~---~l~~yd~ 333 (381)
+.+.+....++ .+.||.++ .+-......... . .....-+.+.+++..+++.. .... .+.+||+
T Consensus 178 ~~~l~~~~~dg--~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~--------~~d~~~~~i~~~d~ 247 (416)
T 2pm9_A 178 AHVFASAGSSN--FASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATA--------TGSDNDPSILIWDL 247 (416)
T ss_dssp TTEEEEESSSS--CEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEE--------ECCSSSCCCCEEET
T ss_pred CcEEEEEcCCC--CEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEE--------ECCCCCceEEEEeC
Confidence 56666665555 79999988 443332222210 0 23456677777764355542 2333 7999999
Q ss_pred CCC
Q 016891 334 QNQ 336 (381)
Q Consensus 334 ~t~ 336 (381)
++.
T Consensus 248 ~~~ 250 (416)
T 2pm9_A 248 RNA 250 (416)
T ss_dssp TST
T ss_pred CCC
Confidence 885
No 117
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=73.11 E-value=79 Score=31.54 Aligned_cols=97 Identities=21% Similarity=0.281 Sum_probs=61.3
Q ss_pred EEEEEECCCCeeeee-cCCCCCCCCCceeEEEEEE-C--CeEEEEEecCCCceEEEEEEC-CceeEEEEecCCCCCeeEE
Q 016891 226 LIIAFNLKSEEFHEV-PLPHLENRNDVLVMFVGNF-S--GCLYFSCLCNYPQPVDIWVLM-GCWTKTFSFPRSVGDYVKA 300 (381)
Q Consensus 226 ~i~~fD~~~e~~~~i-~~P~~~~~~~~~~~~L~~~-~--G~L~~~~~~~~~~~~~iW~l~-~~W~~~~~i~~~~~~~~~~ 300 (381)
.|..+|+.++++..+ .+.... ..-..+.-. + |.+.+.+..++ .+.||.++ ..|.....+... ......
T Consensus 32 ~I~vwd~~~~~~~~~~~l~~h~----~~V~~l~~s~~~~~~~l~s~s~Dg--~I~vwd~~~~~~~~~~~~~~h-~~~V~~ 104 (753)
T 3jro_A 32 TIKIFEVEGETHKLIDTLTGHE----GPVWRVDWAHPKFGTILASCSYDG--KVLIWKEENGRWSQIAVHAVH-SASVNS 104 (753)
T ss_dssp EEEEEEEETTEEEEEEEECCCS----SCEEEEEECCTTSCSEEEEEETTS--CEEEEEEETTEEEEEEEECCC-SSCEEE
T ss_pred cEEEEecCCCCCccceeccCCc----CceEEEEecCCCCCCEEEEEeCCC--eEEEEECCCCcccccccccCC-CCCeEE
Confidence 788899887666554 222111 112233332 3 67777766666 79999999 778777766521 134566
Q ss_pred EEEEeC--CCEEEEEecccCCccccCCcEEEEEeCCCCce
Q 016891 301 LAYSKS--GGKVLVDKFEYGEDEDINRWELFWYDLQNQGA 338 (381)
Q Consensus 301 ~~~~~~--g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~ 338 (381)
+.+.++ +..++.. ..+..+.+||++++..
T Consensus 105 v~~sp~~~~~~l~sg---------s~dg~I~vwdl~~~~~ 135 (753)
T 3jro_A 105 VQWAPHEYGPLLLVA---------SSDGKVSVVEFKENGT 135 (753)
T ss_dssp EEECCGGGCSEEEEE---------ETTSEEEEEECCSSSC
T ss_pred EEECCCCCCCEEEEE---------eCCCcEEEEEeecCCC
Confidence 677777 7744444 4567899999998843
No 118
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=73.06 E-value=42 Score=28.34 Aligned_cols=191 Identities=12% Similarity=0.088 Sum_probs=98.3
Q ss_pred ccCcEEEEeeC--CCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCC
Q 016891 107 SCNGLIAFKND--ENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRT 184 (381)
Q Consensus 107 s~~GLl~~~~~--~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t 184 (381)
..+|.|.+... ...+.++|+..+....+..... ....++.+|+.. . ++.... ....+.+|+...
T Consensus 86 ~~~g~l~v~~~~~~~~i~~~d~~g~~~~~~~~~~~-----~~~~~i~~~~~g-~--l~v~~~------~~~~i~~~~~~g 151 (286)
T 1q7f_A 86 RNSGDIIVTERSPTHQIQIYNQYGQFVRKFGATIL-----QHPRGVTVDNKG-R--IIVVEC------KVMRVIIFDQNG 151 (286)
T ss_dssp TTTTEEEEEECGGGCEEEEECTTSCEEEEECTTTC-----SCEEEEEECTTS-C--EEEEET------TTTEEEEECTTS
T ss_pred cCCCeEEEEcCCCCCEEEEECCCCcEEEEecCccC-----CCceEEEEeCCC-C--EEEEEC------CCCEEEEEcCCC
Confidence 45777766652 6789999965554444433211 122345556532 2 222210 114567777654
Q ss_pred CcEEEcccCCCcceecCCCcEEE--CCeeEEEEeeCCCCCCcCEEEEEECCCCeeeeecCCCCCCCCCceeEEEEEE-CC
Q 016891 185 NSWRRIRVDFPYYILHGWDGTFA--DGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEVPLPHLENRNDVLVMFVGNF-SG 261 (381)
Q Consensus 185 ~~W~~~~~~~p~~~~~~~~~v~~--nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~-~G 261 (381)
..-+.+....... ...++.+ +|.+|+...... .|..||...+....+..+.... ....++.. +|
T Consensus 152 ~~~~~~~~~~~~~---~p~~i~~~~~g~l~v~~~~~~------~i~~~~~~g~~~~~~~~~g~~~----~p~~i~~d~~G 218 (286)
T 1q7f_A 152 NVLHKFGCSKHLE---FPNGVVVNDKQEIFISDNRAH------CVKVFNYEGQYLRQIGGEGITN----YPIGVGINSNG 218 (286)
T ss_dssp CEEEEEECTTTCS---SEEEEEECSSSEEEEEEGGGT------EEEEEETTCCEEEEESCTTTSC----SEEEEEECTTC
T ss_pred CEEEEeCCCCccC---CcEEEEECCCCCEEEEECCCC------EEEEEcCCCCEEEEEccCCccC----CCcEEEECCCC
Confidence 4333332110000 0144554 478777654332 7999999877665554332111 12234443 68
Q ss_pred eEEEEEecCCCceEEEEEECCceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCC
Q 016891 262 CLYFSCLCNYPQPVDIWVLMGCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQ 336 (381)
Q Consensus 262 ~L~~~~~~~~~~~~~iW~l~~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~ 336 (381)
.|+++...... .+.+|..+..-........ ......-+++.++|. +++. .....+.+|+....
T Consensus 219 ~l~v~~~~~~~-~i~~~~~~g~~~~~~~~~~-~~~~~~~i~~~~~g~-l~vs---------~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 219 EILIADNHNNF-NLTIFTQDGQLISALESKV-KHAQCFDVALMDDGS-VVLA---------SKDYRLYIYRYVQL 281 (286)
T ss_dssp CEEEEECSSSC-EEEEECTTSCEEEEEEESS-CCSCEEEEEEETTTE-EEEE---------ETTTEEEEEECSCC
T ss_pred CEEEEeCCCCE-EEEEECCCCCEEEEEcccC-CCCcceeEEECCCCc-EEEE---------CCCCeEEEEEcccc
Confidence 88888765432 6777764433222222221 112244566777786 7777 23567888887543
No 119
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=72.98 E-value=41 Score=28.29 Aligned_cols=198 Identities=14% Similarity=0.069 Sum_probs=99.6
Q ss_pred EEcccCcEEEEee-CCCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEc
Q 016891 104 IIDSCNGLIAFKN-DENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSL 182 (381)
Q Consensus 104 ~~~s~~GLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss 182 (381)
+.-..+|-+.+.. ....++++||. ++...++.+... ....++.+|+. +. +. +.. . ....+..|+.
T Consensus 67 i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~----~~~~~i~~~~~-g~--l~-v~~---~--~~~~i~~~~~ 132 (300)
T 2qc5_A 67 LIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPD----SGPYGITEGLN-GD--IW-FTQ---L--NGDRIGKLTA 132 (300)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTT----CCEEEEEECST-TC--EE-EEE---T--TTTEEEEECT
T ss_pred EEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCC----CCCccceECCC-CC--EE-EEc---c--CCCeEEEECC
Confidence 3334566665555 35678999998 666544322111 12334555543 22 21 211 0 0135666666
Q ss_pred CCCcEEEcccCCCcceecCCCcEEE--CCeeEEEEeeCCCCCCcCEEEEEECCCCeeeeecCCCCCCCCCceeEEEEEE-
Q 016891 183 RTNSWRRIRVDFPYYILHGWDGTFA--DGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEVPLPHLENRNDVLVMFVGNF- 259 (381)
Q Consensus 183 ~t~~W~~~~~~~p~~~~~~~~~v~~--nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~- 259 (381)
. +...... . +.... ...++.+ +|.+|+...... .|..+|. +.++..+..|.... ....+...
T Consensus 133 ~-g~~~~~~-~-~~~~~-~~~~i~~d~~g~l~v~~~~~~------~i~~~~~-~g~~~~~~~~~~~~----~~~~i~~d~ 197 (300)
T 2qc5_A 133 D-GTIYEYD-L-PNKGS-YPAFITLGSDNALWFTENQNN------SIGRITN-TGKLEEYPLPTNAA----APVGITSGN 197 (300)
T ss_dssp T-SCEEEEE-C-SSTTC-CEEEEEECTTSSEEEEETTTT------EEEEECT-TCCEEEEECSSTTC----CEEEEEECT
T ss_pred C-CCEEEcc-C-CCCCC-CceeEEECCCCCEEEEecCCC------eEEEECC-CCcEEEeeCCCCCC----CcceEEECC
Confidence 5 5555432 1 11000 0033443 578776554332 7999999 56666565553321 12234433
Q ss_pred CCeEEEEEecCCCceEEEEEECCceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCcee
Q 016891 260 SGCLYFSCLCNYPQPVDIWVLMGCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGAA 339 (381)
Q Consensus 260 ~G~L~~~~~~~~~~~~~iW~l~~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~~ 339 (381)
+|.|++...... .+.++..+..... ..++. ......-+++.++|. |++.. .....|..||+ ++++
T Consensus 198 ~g~l~v~~~~~~--~i~~~~~~g~~~~-~~~~~-~~~~~~~i~~d~~g~-l~v~~--------~~~~~i~~~~~-~g~~- 262 (300)
T 2qc5_A 198 DGALWFVEIMGN--KIGRITTTGEISE-YDIPT-PNARPHAITAGKNSE-IWFTE--------WGANQIGRITN-DNTI- 262 (300)
T ss_dssp TSSEEEEETTTT--EEEEECTTCCEEE-EECSS-TTCCEEEEEECSTTC-EEEEE--------TTTTEEEEECT-TSCE-
T ss_pred CCCEEEEccCCC--EEEEEcCCCcEEE-EECCC-CCCCceEEEECCCCC-EEEec--------cCCCeEEEECC-CCcE-
Confidence 688888765443 3433333334333 22321 112234455566777 88872 23467999999 5666
Q ss_pred eeeEEEe
Q 016891 340 ADQVTIH 346 (381)
Q Consensus 340 ~~~v~~~ 346 (381)
+.+.+.
T Consensus 263 -~~~~~~ 268 (300)
T 2qc5_A 263 -QEYQLQ 268 (300)
T ss_dssp -EEEECC
T ss_pred -EEEECC
Confidence 655443
No 120
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=72.20 E-value=51 Score=28.96 Aligned_cols=74 Identities=9% Similarity=0.003 Sum_probs=45.2
Q ss_pred CCeEEEEEecCCCceEEEEEEC-CceeEEEEecCCC--CCeeEEEEEEeCCCEEEEEecccCCccccC-CcEEEEEeCC-
Q 016891 260 SGCLYFSCLCNYPQPVDIWVLM-GCWTKTFSFPRSV--GDYVKALAYSKSGGKVLVDKFEYGEDEDIN-RWELFWYDLQ- 334 (381)
Q Consensus 260 ~G~L~~~~~~~~~~~~~iW~l~-~~W~~~~~i~~~~--~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~-~~~l~~yd~~- 334 (381)
+|+..++...... .+.+|.++ ........+.... .....-+++.++|+.|++.. .. ...+.+|+++
T Consensus 221 dg~~l~v~~~~~~-~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~--------~~~~~~i~v~~~~~ 291 (361)
T 3scy_A 221 DGKFAYLINEIGG-TVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASN--------RLKADGVAIFKVDE 291 (361)
T ss_dssp TSSEEEEEETTTC-EEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEE--------CSSSCEEEEEEECT
T ss_pred CCCEEEEEcCCCC-eEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEEC--------CCCCCEEEEEEEcC
Confidence 6764444443232 79999988 6666666665221 13345677888999776663 23 4568887774
Q ss_pred -CCceeeeeEE
Q 016891 335 -NQGAAADQVT 344 (381)
Q Consensus 335 -t~~~~~~~v~ 344 (381)
++++ +.+.
T Consensus 292 ~~g~~--~~~~ 300 (361)
T 3scy_A 292 TNGTL--TKVG 300 (361)
T ss_dssp TTCCE--EEEE
T ss_pred CCCcE--EEee
Confidence 6777 6553
No 121
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=71.82 E-value=52 Score=28.97 Aligned_cols=78 Identities=15% Similarity=0.052 Sum_probs=41.2
Q ss_pred CcEEE--CCeeEEEEeeCCCCCCcCEEEEEECCCCe-eeeecCCCCCCCCCceeEEEEEE--CCeEEEEEecC-CCceEE
Q 016891 203 DGTFA--DGHVHWLVTNNPEDYIENLIIAFNLKSEE-FHEVPLPHLENRNDVLVMFVGNF--SGCLYFSCLCN-YPQPVD 276 (381)
Q Consensus 203 ~~v~~--nG~lYwl~~~~~~~~~~~~i~~fD~~~e~-~~~i~~P~~~~~~~~~~~~L~~~--~G~L~~~~~~~-~~~~~~ 276 (381)
.++.+ +|.|||+..... ......|+.||+.+.+ ...+.+|..........-.++.. +|.+++..... ....+.
T Consensus 70 ~gv~~d~~g~L~v~D~g~~-~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~ 148 (343)
T 2qe8_A 70 LGIKSDGNGIVWMLDNGNQ-SKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALI 148 (343)
T ss_dssp EEEEECSSSEEEEEECHHH-HTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEE
T ss_pred eEEEEcCCCcEEEEcCCCC-cCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEE
Confidence 45565 489999874310 0001279999999877 45566664321111111234444 46777766521 112666
Q ss_pred EEEEC
Q 016891 277 IWVLM 281 (381)
Q Consensus 277 iW~l~ 281 (381)
+|.++
T Consensus 149 v~d~~ 153 (343)
T 2qe8_A 149 RVDLQ 153 (343)
T ss_dssp EEETT
T ss_pred EEECC
Confidence 66665
No 122
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=71.59 E-value=45 Score=28.06 Aligned_cols=193 Identities=16% Similarity=0.087 Sum_probs=97.9
Q ss_pred EEcccCcEEEEeeC-CCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEc
Q 016891 104 IIDSCNGLIAFKND-ENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSL 182 (381)
Q Consensus 104 ~~~s~~GLl~~~~~-~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss 182 (381)
+....+|-+.+... ...+.++||. ++...++.+... ....++..|+. +. + .+.. . ....+..|+.
T Consensus 20 i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~----~~~~~i~~~~~-g~--l-~v~~---~--~~~~i~~~~~ 85 (299)
T 2z2n_A 20 ITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPD----AKVMCLTISSD-GE--V-WFTE---N--AANKIGRITK 85 (299)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTT----CCEEEEEECTT-SC--E-EEEE---T--TTTEEEEECT
T ss_pred eEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCccc----CceeeEEECCC-CC--E-EEeC---C--CCCeEEEECC
Confidence 33345666655553 5678999998 776665432111 12334555543 22 2 1211 0 0134566665
Q ss_pred CCCcEEEcccCCCcceecCCCcEEE--CCeeEEEEeeCCCCCCcCEEEEEECCCCeeeeecCCCCCCCCCceeEEEEEE-
Q 016891 183 RTNSWRRIRVDFPYYILHGWDGTFA--DGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEVPLPHLENRNDVLVMFVGNF- 259 (381)
Q Consensus 183 ~t~~W~~~~~~~p~~~~~~~~~v~~--nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~- 259 (381)
. +..+... . |.... ...++.+ +|.+|+..... ..|..+|+ +.+...+..|.... ....+...
T Consensus 86 ~-g~~~~~~-~-~~~~~-~~~~i~~~~~g~l~v~~~~~------~~i~~~d~-~g~~~~~~~~~~~~----~~~~i~~~~ 150 (299)
T 2z2n_A 86 K-GIIKEYT-L-PNPDS-APYGITEGPNGDIWFTEMNG------NRIGRITD-DGKIREYELPNKGS----YPSFITLGS 150 (299)
T ss_dssp T-SCEEEEE-C-SSTTC-CEEEEEECTTSCEEEEETTT------TEEEEECT-TCCEEEEECSSTTC----CEEEEEECT
T ss_pred C-CcEEEEe-C-CCcCC-CceeeEECCCCCEEEEecCC------ceEEEECC-CCCEEEecCCCCCC----CCceEEEcC
Confidence 4 4554443 1 11000 0034444 57777655333 27999999 66666555543221 12234443
Q ss_pred CCeEEEEEecCCCceEEEEEEC--CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCc
Q 016891 260 SGCLYFSCLCNYPQPVDIWVLM--GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQG 337 (381)
Q Consensus 260 ~G~L~~~~~~~~~~~~~iW~l~--~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~ 337 (381)
+|.|++...... . |+.++ .+... ..++. ......-+++.++|. |++.. .....+..||+ +++
T Consensus 151 ~g~l~v~~~~~~--~--i~~~~~~g~~~~-~~~~~-~~~~~~~i~~~~~g~-l~v~~--------~~~~~i~~~~~-~g~ 214 (299)
T 2z2n_A 151 DNALWFTENQNN--A--IGRITESGDITE-FKIPT-PASGPVGITKGNDDA-LWFVE--------IIGNKIGRITT-SGE 214 (299)
T ss_dssp TSCEEEEETTTT--E--EEEECTTCCEEE-EECSS-TTCCEEEEEECTTSS-EEEEE--------TTTTEEEEECT-TCC
T ss_pred CCCEEEEeCCCC--E--EEEEcCCCcEEE-eeCCC-CCCcceeEEECCCCC-EEEEc--------cCCceEEEECC-CCc
Confidence 678887665333 3 44444 33332 22221 112234455566777 77772 23567999999 777
Q ss_pred eeeeeE
Q 016891 338 AAADQV 343 (381)
Q Consensus 338 ~~~~~v 343 (381)
+ +.+
T Consensus 215 ~--~~~ 218 (299)
T 2z2n_A 215 I--TEF 218 (299)
T ss_dssp E--EEE
T ss_pred E--EEE
Confidence 7 655
No 123
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=71.49 E-value=49 Score=28.47 Aligned_cols=103 Identities=8% Similarity=-0.095 Sum_probs=58.5
Q ss_pred CeeEEEEeeCCCCCCcCEEEEEECCCCeeeee-cCCCCCCCCCceeEEEEEE-CCe-EEEEEecCCCceEEEEEEC-Cce
Q 016891 209 GHVHWLVTNNPEDYIENLIIAFNLKSEEFHEV-PLPHLENRNDVLVMFVGNF-SGC-LYFSCLCNYPQPVDIWVLM-GCW 284 (381)
Q Consensus 209 G~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~~~L~~~-~G~-L~~~~~~~~~~~~~iW~l~-~~W 284 (381)
+.+|+....+. .|..+|+.+.+.... ..+.. ...+... +|+ |+++..... .+.+|.++ ..-
T Consensus 10 ~~~~v~~~~~~------~v~~~d~~~~~~~~~~~~~~~-------~~~~~~s~dg~~l~~~~~~~~--~i~~~d~~~~~~ 74 (331)
T 3u4y_A 10 NFGIVVEQHLR------RISFFSTDTLEILNQITLGYD-------FVDTAITSDCSNVVVTSDFCQ--TLVQIETQLEPP 74 (331)
T ss_dssp CEEEEEEGGGT------EEEEEETTTCCEEEEEECCCC-------EEEEEECSSSCEEEEEESTTC--EEEEEECSSSSC
T ss_pred CEEEEEecCCC------eEEEEeCcccceeeeEEccCC-------cceEEEcCCCCEEEEEeCCCC--eEEEEECCCCce
Confidence 45566554442 799999998777443 44311 2244443 576 444444333 67777776 432
Q ss_pred eEEEEecCCCCCeeEE-EEEEeCCCEEEEEecccCCccccCC-c--EEEEEeCCCCce
Q 016891 285 TKTFSFPRSVGDYVKA-LAYSKSGGKVLVDKFEYGEDEDINR-W--ELFWYDLQNQGA 338 (381)
Q Consensus 285 ~~~~~i~~~~~~~~~~-~~~~~~g~~i~l~~~~~~~~~~~~~-~--~l~~yd~~t~~~ 338 (381)
....+.. +....- +++.++|..|+ .. ... . .+.+||+++++.
T Consensus 75 -~~~~~~~--~~~~~~~~~~s~dg~~l~-~~--------~~~~~~~~i~v~d~~~~~~ 120 (331)
T 3u4y_A 75 -KVVAIQE--GQSSMADVDITPDDQFAV-TV--------TGLNHPFNMQSYSFLKNKF 120 (331)
T ss_dssp -EEEEEEE--CSSCCCCEEECTTSSEEE-EC--------CCSSSSCEEEEEETTTTEE
T ss_pred -eEEeccc--CCCCccceEECCCCCEEE-Ee--------cCCCCcccEEEEECCCCCe
Confidence 1222221 111233 66778898666 52 222 2 799999999887
No 124
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=71.36 E-value=61 Score=29.51 Aligned_cols=188 Identities=10% Similarity=0.078 Sum_probs=100.0
Q ss_pred eeEEcccCcEEEEeeCCCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEE
Q 016891 102 TPIIDSCNGLIAFKNDENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYS 181 (381)
Q Consensus 102 ~~~~~s~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vys 181 (381)
...+...+.+++....+..+.|||..+++....-.. +. .....+.++ +.+ ++ ... ....+.+|+
T Consensus 162 v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~---h~--~~v~~~~~~---~~~-l~-s~s------~dg~i~~wd 225 (445)
T 2ovr_B 162 VWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYG---HT--STVRCMHLH---EKR-VV-SGS------RDATLRVWD 225 (445)
T ss_dssp EEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECC---CS--SCEEEEEEE---TTE-EE-EEE------TTSEEEEEE
T ss_pred EEEEEecCCEEEEEeCCCeEEEEECCcCcEEEEECC---CC--CcEEEEEec---CCE-EE-EEe------CCCEEEEEE
Confidence 344444566666666778899999998875542111 11 122334444 222 22 211 115688888
Q ss_pred cCCCcEEEcccCCCcceecCCCcEEECCeeEEEEeeCCCCCCcCEEEEEECCCCeeee-ecCCCCCCCCCceeEEEEEEC
Q 016891 182 LRTNSWRRIRVDFPYYILHGWDGTFADGHVHWLVTNNPEDYIENLIIAFNLKSEEFHE-VPLPHLENRNDVLVMFVGNFS 260 (381)
Q Consensus 182 s~t~~W~~~~~~~p~~~~~~~~~v~~nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~-i~~P~~~~~~~~~~~~L~~~~ 260 (381)
..++.-...-....... ..+..+|.....+..+. .|..+|+.+.+... +.... ..+.-...+
T Consensus 226 ~~~~~~~~~~~~~~~~v----~~~~~~~~~l~~~~~dg------~i~iwd~~~~~~~~~~~~~~-------~~v~~~~~~ 288 (445)
T 2ovr_B 226 IETGQCLHVLMGHVAAV----RCVQYDGRRVVSGAYDF------MVKVWDPETETCLHTLQGHT-------NRVYSLQFD 288 (445)
T ss_dssp SSSCCEEEEEECCSSCE----EEEEECSSCEEEEETTS------CEEEEEGGGTEEEEEECCCS-------SCEEEEEEC
T ss_pred CCCCcEEEEEcCCcccE----EEEEECCCEEEEEcCCC------EEEEEECCCCcEeEEecCCC-------CceEEEEEC
Confidence 87764322110111111 44556777666655442 68999988765432 22111 112222337
Q ss_pred CeEEEEEecCCCceEEEEEEC-CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCce
Q 016891 261 GCLYFSCLCNYPQPVDIWVLM-GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGA 338 (381)
Q Consensus 261 G~L~~~~~~~~~~~~~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~ 338 (381)
|...+....++ .+.+|.++ .+ .+..+.. ....+.++..+++.++.. ..+..+.+||+++++.
T Consensus 289 ~~~l~~~~~d~--~i~i~d~~~~~--~~~~~~~---~~~~v~~~~~~~~~l~~~---------~~dg~i~vwd~~~~~~ 351 (445)
T 2ovr_B 289 GIHVVSGSLDT--SIRVWDVETGN--CIHTLTG---HQSLTSGMELKDNILVSG---------NADSTVKIWDIKTGQC 351 (445)
T ss_dssp SSEEEEEETTS--CEEEEETTTCC--EEEEECC---CCSCEEEEEEETTEEEEE---------ETTSCEEEEETTTCCE
T ss_pred CCEEEEEeCCC--eEEEEECCCCC--EEEEEcC---CcccEEEEEEeCCEEEEE---------eCCCeEEEEECCCCcE
Confidence 77766666655 79999987 33 2233331 111233444466744444 3556799999988766
No 125
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=71.28 E-value=45 Score=28.02 Aligned_cols=193 Identities=15% Similarity=0.115 Sum_probs=98.8
Q ss_pred EEcccCcEEEEee-CCCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEc
Q 016891 104 IIDSCNGLIAFKN-DENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSL 182 (381)
Q Consensus 104 ~~~s~~GLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss 182 (381)
+.-..+|-+.+.. ....+.++||. ++...++.+.. .....++..|+. +. +. +.. . ....+.+|+.
T Consensus 25 i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~----~~~~~~i~~~~~-g~--l~-v~~---~--~~~~v~~~d~ 90 (300)
T 2qc5_A 25 ITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTP----DAKVMCLIVSSL-GD--IW-FTE---N--GANKIGKLSK 90 (300)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSST----TCCEEEEEECTT-SC--EE-EEE---T--TTTEEEEECT
T ss_pred eeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCC----CCcceeEEECCC-CC--EE-EEe---c--CCCeEEEECC
Confidence 3334456665555 45678899998 77665443211 112334555533 22 21 111 0 1135667777
Q ss_pred CCCcEEEcccCCCcceecCCCcEEE--CCeeEEEEeeCCCCCCcCEEEEEECCCCeeeeecCCCCCCCCCceeEEEEE-E
Q 016891 183 RTNSWRRIRVDFPYYILHGWDGTFA--DGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEVPLPHLENRNDVLVMFVGN-F 259 (381)
Q Consensus 183 ~t~~W~~~~~~~p~~~~~~~~~v~~--nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~-~ 259 (381)
. +.++... ..... . ...++.+ +|.+|+...... .|..+|.. .+...+.+|.... ....+.. .
T Consensus 91 ~-g~~~~~~-~~~~~-~-~~~~i~~~~~g~l~v~~~~~~------~i~~~~~~-g~~~~~~~~~~~~----~~~~i~~d~ 155 (300)
T 2qc5_A 91 K-GGFTEYP-LPQPD-S-GPYGITEGLNGDIWFTQLNGD------RIGKLTAD-GTIYEYDLPNKGS----YPAFITLGS 155 (300)
T ss_dssp T-SCEEEEE-CSSTT-C-CEEEEEECSTTCEEEEETTTT------EEEEECTT-SCEEEEECSSTTC----CEEEEEECT
T ss_pred C-CCeEEec-CCCCC-C-CCccceECCCCCEEEEccCCC------eEEEECCC-CCEEEccCCCCCC----CceeEEECC
Confidence 6 6666443 11110 0 0034444 578776554332 79999998 6666555553221 1223444 3
Q ss_pred CCeEEEEEecCCCceEEEEEEC--CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCc
Q 016891 260 SGCLYFSCLCNYPQPVDIWVLM--GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQG 337 (381)
Q Consensus 260 ~G~L~~~~~~~~~~~~~iW~l~--~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~ 337 (381)
+|+|++...... . |+.++ .+... ..++... ....-+.+.++|. |++.. .....+..||+ +++
T Consensus 156 ~g~l~v~~~~~~--~--i~~~~~~g~~~~-~~~~~~~-~~~~~i~~d~~g~-l~v~~--------~~~~~i~~~~~-~g~ 219 (300)
T 2qc5_A 156 DNALWFTENQNN--S--IGRITNTGKLEE-YPLPTNA-AAPVGITSGNDGA-LWFVE--------IMGNKIGRITT-TGE 219 (300)
T ss_dssp TSSEEEEETTTT--E--EEEECTTCCEEE-EECSSTT-CCEEEEEECTTSS-EEEEE--------TTTTEEEEECT-TCC
T ss_pred CCCEEEEecCCC--e--EEEECCCCcEEE-eeCCCCC-CCcceEEECCCCC-EEEEc--------cCCCEEEEEcC-CCc
Confidence 688877765433 3 45554 44433 2232111 2234455555676 87773 23457999999 555
Q ss_pred eeeeeE
Q 016891 338 AAADQV 343 (381)
Q Consensus 338 ~~~~~v 343 (381)
+ ..+
T Consensus 220 ~--~~~ 223 (300)
T 2qc5_A 220 I--SEY 223 (300)
T ss_dssp E--EEE
T ss_pred E--EEE
Confidence 5 454
No 126
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=71.26 E-value=50 Score=28.45 Aligned_cols=192 Identities=14% Similarity=0.048 Sum_probs=103.1
Q ss_pred CcEEEEee---CCCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCC
Q 016891 109 NGLIAFKN---DENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTN 185 (381)
Q Consensus 109 ~GLl~~~~---~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~ 185 (381)
+|.|.... ....+.+.|+.|++...--+.+. .....++..+ . + ++..... ....+.+|+..+.
T Consensus 31 dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~----~~fgeGi~~~--g-~-~lyv~t~------~~~~v~viD~~t~ 96 (266)
T 2iwa_A 31 NDTLFESTGLYGRSSVRQVALQTGKVENIHKMDD----SYFGEGLTLL--N-E-KLYQVVW------LKNIGFIYDRRTL 96 (266)
T ss_dssp TTEEEEEECSTTTCEEEEEETTTCCEEEEEECCT----TCCEEEEEEE--T-T-EEEEEET------TCSEEEEEETTTT
T ss_pred CCeEEEECCCCCCCEEEEEECCCCCEEEEEecCC----CcceEEEEEe--C-C-EEEEEEe------cCCEEEEEECCCC
Confidence 47776664 25789999999998765211111 1112233333 2 2 3333321 1157888998765
Q ss_pred cEEEcccCCCcceecCCCcEEECCeeEEEEeeCCCCCCcCEEEEEECCCCe-eeeecCCCCCCCCCceeEEEEEECCeEE
Q 016891 186 SWRRIRVDFPYYILHGWDGTFADGHVHWLVTNNPEDYIENLIIAFNLKSEE-FHEVPLPHLENRNDVLVMFVGNFSGCLY 264 (381)
Q Consensus 186 ~W~~~~~~~p~~~~~~~~~v~~nG~lYwl~~~~~~~~~~~~i~~fD~~~e~-~~~i~~P~~~~~~~~~~~~L~~~~G~L~ 264 (381)
+.+. .++.. ....-++..+|.--|.+... ..|..+|+.+.+ -..++...........+ .|.-.+|+|+
T Consensus 97 --~v~~-~i~~g-~~~g~glt~Dg~~l~vs~gs------~~l~viD~~t~~v~~~I~Vg~~~~p~~~~n-ele~~dg~ly 165 (266)
T 2iwa_A 97 --SNIK-NFTHQ-MKDGWGLATDGKILYGSDGT------SILYEIDPHTFKLIKKHNVKYNGHRVIRLN-ELEYINGEVW 165 (266)
T ss_dssp --EEEE-EEECC-SSSCCEEEECSSSEEEECSS------SEEEEECTTTCCEEEEEECEETTEECCCEE-EEEEETTEEE
T ss_pred --cEEE-EEECC-CCCeEEEEECCCEEEEECCC------CeEEEEECCCCcEEEEEEECCCCcccccce-eEEEECCEEE
Confidence 3333 33322 11124566677544455432 289999998744 34444321110000011 2223388888
Q ss_pred EEEecCCCceEEEEEEC-CceeEEEEecC-CC-----------CCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEE
Q 016891 265 FSCLCNYPQPVDIWVLM-GCWTKTFSFPR-SV-----------GDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWY 331 (381)
Q Consensus 265 ~~~~~~~~~~~~iW~l~-~~W~~~~~i~~-~~-----------~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~y 331 (381)
+...... .|.+.+ ..+..+..|+. .. .....-+++.++++++|+.+ ....+++..
T Consensus 166 vn~~~~~----~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTg--------k~~~~v~~i 233 (266)
T 2iwa_A 166 ANIWQTD----CIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTG--------KLWPKLFEI 233 (266)
T ss_dssp EEETTSS----EEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEE--------TTCSEEEEE
T ss_pred EecCCCC----eEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEEC--------CCCCeEEEE
Confidence 6654433 577788 66766666661 00 02335566677788788874 456678887
Q ss_pred eCCCCc
Q 016891 332 DLQNQG 337 (381)
Q Consensus 332 d~~t~~ 337 (381)
++.+..
T Consensus 234 ~l~~~~ 239 (266)
T 2iwa_A 234 KLHLVR 239 (266)
T ss_dssp EEEECC
T ss_pred EEeccc
Confidence 776554
No 127
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=70.85 E-value=74 Score=30.29 Aligned_cols=191 Identities=11% Similarity=0.026 Sum_probs=96.1
Q ss_pred CcEEEEeeCCCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCCcEE
Q 016891 109 NGLIAFKNDENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTNSWR 188 (381)
Q Consensus 109 ~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W~ 188 (381)
+++++.........|+|..|++.+.|...+. ..+.++|. +.+-+ .... +..+...+.+++..++.++
T Consensus 122 ~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--------~~~~~spD-G~~la-~~~~---~~~~~~~i~~~d~~~g~~~ 188 (582)
T 3o4h_A 122 EAVVFTGATEDRVALYALDGGGLRELARLPG--------FGFVSDIR-GDLIA-GLGF---FGGGRVSLFTSNLSSGGLR 188 (582)
T ss_dssp SCEEEEEECSSCEEEEEEETTEEEEEEEESS--------CEEEEEEE-TTEEE-EEEE---EETTEEEEEEEETTTCCCE
T ss_pred CeEEEEecCCCCceEEEccCCcEEEeecCCC--------ceEEECCC-CCEEE-EEEE---cCCCCeEEEEEcCCCCCce
Confidence 4566666655566799999998887764321 12333433 33322 2211 1112255888898899888
Q ss_pred EcccCCCcceecCCCcEEECCeeEEEEeeCCCCCCcCEEEEEECCCCeeeeecCCCCC-CCCCcee-EEE-EEECCeEEE
Q 016891 189 RIRVDFPYYILHGWDGTFADGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEVPLPHLE-NRNDVLV-MFV-GNFSGCLYF 265 (381)
Q Consensus 189 ~~~~~~p~~~~~~~~~v~~nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~-~~~~~~~-~~L-~~~~G~L~~ 265 (381)
.+. ..+..... ....=||...+.+..+. ...|..+|+.+.+...+...... ....... ... ..-+|.+++
T Consensus 189 ~l~-~~~~~~~~--~~~SpDG~~l~~~~~~~----~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~~~ 261 (582)
T 3o4h_A 189 VFD-SGEGSFSS--ASISPGMKVTAGLETAR----EARLVTVDPRDGSVEDLELPSKDFSSYRPTAITWLGYLPDGRLAV 261 (582)
T ss_dssp EEC-CSSCEEEE--EEECTTSCEEEEEECSS----CEEEEEECTTTCCEEECCCSCSHHHHHCCSEEEEEEECTTSCEEE
T ss_pred Eee-cCCCcccc--ceECCCCCEEEEccCCC----eeEEEEEcCCCCcEEEccCCCcChhhhhhccccceeEcCCCcEEE
Confidence 776 32221110 11112565444332221 13689999998777632221110 0000000 011 223677777
Q ss_pred EEecCCCceEEEEEECCceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCC
Q 016891 266 SCLCNYPQPVDIWVLMGCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQN 335 (381)
Q Consensus 266 ~~~~~~~~~~~iW~l~~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t 335 (381)
....++ .+.||.+ .+..+ . +.....-+.+. +|. +++.. ..+.....++.+|+++
T Consensus 262 ~~~~~g--~~~l~~~-g~~~~---~---~~~~v~~~~~s-dg~-~l~~~-----s~~~~p~~l~~~d~~~ 315 (582)
T 3o4h_A 262 VARREG--RSAVFID-GERVE---A---PQGNHGRVVLW-RGK-LVTSH-----TSLSTPPRIVSLPSGE 315 (582)
T ss_dssp EEEETT--EEEEEET-TEEEC---C---CSSEEEEEEEE-TTE-EEEEE-----EETTEEEEEEEETTCC
T ss_pred EEEcCC--cEEEEEE-CCeec---c---CCCceEEEEec-CCE-EEEEE-----cCCCCCCeEEEEcCCC
Confidence 666655 7899988 33221 1 11233445666 676 44442 1112234688888876
No 128
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=70.66 E-value=60 Score=29.13 Aligned_cols=95 Identities=16% Similarity=0.044 Sum_probs=55.7
Q ss_pred EEEEEECCCCeee-eecCCCCCCCCCceeEEEEEE-CCeEEEEEe-cCCCceEEEEEEC-CceeEEEEecCCCCCeeEEE
Q 016891 226 LIIAFNLKSEEFH-EVPLPHLENRNDVLVMFVGNF-SGCLYFSCL-CNYPQPVDIWVLM-GCWTKTFSFPRSVGDYVKAL 301 (381)
Q Consensus 226 ~i~~fD~~~e~~~-~i~~P~~~~~~~~~~~~L~~~-~G~L~~~~~-~~~~~~~~iW~l~-~~W~~~~~i~~~~~~~~~~~ 301 (381)
.|..+|+.+.+.. .+..+. ....+.-. +|+..++.. ..+. .+.||.++ ........+.... ....-+
T Consensus 285 ~i~i~d~~~~~~~~~~~~~~-------~v~~~~~s~~~~~l~~~~g~~dg-~i~v~~~~~~~~~~~~~~~~h~-~~v~~~ 355 (401)
T 4aez_A 285 QIHFWNAATGARVNTVDAGS-------QVTSLIWSPHSKEIMSTHGFPDN-NLSIWSYSSSGLTKQVDIPAHD-TRVLYS 355 (401)
T ss_dssp EEEEEETTTCCEEEEEECSS-------CEEEEEECSSSSEEEEEECTTTC-EEEEEEEETTEEEEEEEEECCS-SCCCEE
T ss_pred EEEEEECCCCCEEEEEeCCC-------cEEEEEECCCCCeEEEEeecCCC-cEEEEecCCccceeEEEecCCC-CCEEEE
Confidence 7999998876543 233221 12233332 566555543 2333 89999999 6677766654211 234556
Q ss_pred EEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCce
Q 016891 302 AYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGA 338 (381)
Q Consensus 302 ~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~ 338 (381)
.+.++|..|+.. ..+..+.+||+.+++.
T Consensus 356 ~~s~dg~~l~s~---------~~dg~i~iw~~~~~~~ 383 (401)
T 4aez_A 356 ALSPDGRILSTA---------ASDENLKFWRVYDGDH 383 (401)
T ss_dssp EECTTSSEEEEE---------CTTSEEEEEECCC---
T ss_pred EECCCCCEEEEE---------eCCCcEEEEECCCCcc
Confidence 777888845544 4566899999998876
No 129
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=69.96 E-value=60 Score=28.92 Aligned_cols=70 Identities=16% Similarity=0.192 Sum_probs=44.5
Q ss_pred CCeEEEEEecCC------CceEEEEEEC-CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEe
Q 016891 260 SGCLYFSCLCNY------PQPVDIWVLM-GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYD 332 (381)
Q Consensus 260 ~G~L~~~~~~~~------~~~~~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd 332 (381)
+++|+++...+. .....||+.+ .....+.+++ .+. ..-+++.++|++|+.. .. ..|.+||
T Consensus 265 g~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~--~~~-p~~ia~spdg~~l~v~---------n~-~~v~v~D 331 (361)
T 2oiz_A 265 SGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIP--GRD-ALSMTIDQQRNLMLTL---------DG-GNVNVYD 331 (361)
T ss_dssp TTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEE--CTT-CCEEEEETTTTEEEEE---------CS-SCEEEEE
T ss_pred CCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEe--cCC-eeEEEECCCCCEEEEe---------CC-CeEEEEE
Confidence 367777665111 0123566666 5556677776 223 5667888899966655 23 6799999
Q ss_pred CCCCceeeeeEE
Q 016891 333 LQNQGAAADQVT 344 (381)
Q Consensus 333 ~~t~~~~~~~v~ 344 (381)
++|+++ +.+.
T Consensus 332 ~~t~~l--~~~~ 341 (361)
T 2oiz_A 332 ISQPEP--KLLR 341 (361)
T ss_dssp CSSSSC--EEEE
T ss_pred CCCCcc--eeeE
Confidence 999966 6563
No 130
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=68.70 E-value=62 Score=28.58 Aligned_cols=101 Identities=15% Similarity=0.149 Sum_probs=53.4
Q ss_pred EEEEEECCCCee-eeecCCCCCCC-------CCceeEEEEEE-CCeEEEEEecCCCceEEEEEEC-CceeEEEEec-C--
Q 016891 226 LIIAFNLKSEEF-HEVPLPHLENR-------NDVLVMFVGNF-SGCLYFSCLCNYPQPVDIWVLM-GCWTKTFSFP-R-- 292 (381)
Q Consensus 226 ~i~~fD~~~e~~-~~i~~P~~~~~-------~~~~~~~L~~~-~G~L~~~~~~~~~~~~~iW~l~-~~W~~~~~i~-~-- 292 (381)
.|..+|+.+.+. ..+..|..... +......+.-. +|.+.+....++ .+.||.++ .+-....... .
T Consensus 259 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~ 336 (397)
T 1sq9_A 259 CITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDG--KLRFWDVKTKERITTLNMHCDDI 336 (397)
T ss_dssp EEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTS--EEEEEETTTTEEEEEEECCGGGC
T ss_pred eEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCC--eEEEEEcCCCceeEEEecccCcc
Confidence 799999887543 33333211000 11122233333 577666666555 89999988 4322222211 0
Q ss_pred CC---------------CCeeEEEEEEeCC----------CEEEEEecccCCccccCCcEEEEEeCCCCc
Q 016891 293 SV---------------GDYVKALAYSKSG----------GKVLVDKFEYGEDEDINRWELFWYDLQNQG 337 (381)
Q Consensus 293 ~~---------------~~~~~~~~~~~~g----------~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~ 337 (381)
.. .....-+.+.++| . +++.. ..+..+.+||+++++
T Consensus 337 ~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~-~l~s~--------~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 337 EIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNE-SLCCV--------CLDRSIRWFREAGGK 397 (397)
T ss_dssp SSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSC-EEEEE--------ETTTEEEEEEEEC--
T ss_pred cchhhhhccccccccccCCceeEEEeccccccccccccccc-eEEEe--------cCCCcEEEEEcCCCC
Confidence 11 2345667777787 5 44442 456789999998764
No 131
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=68.52 E-value=62 Score=28.52 Aligned_cols=100 Identities=7% Similarity=-0.025 Sum_probs=49.1
Q ss_pred EEEEEECCCCeeeeecC-CCCCCCCCceeEEEEEECCeEEEEEecCCCceEEEEEECCceeEEEEecCCCCCeeEEEEEE
Q 016891 226 LIIAFNLKSEEFHEVPL-PHLENRNDVLVMFVGNFSGCLYFSCLCNYPQPVDIWVLMGCWTKTFSFPRSVGDYVKALAYS 304 (381)
Q Consensus 226 ~i~~fD~~~e~~~~i~~-P~~~~~~~~~~~~L~~~~G~L~~~~~~~~~~~~~iW~l~~~W~~~~~i~~~~~~~~~~~~~~ 304 (381)
.|..+|+.+.+-..... ..................+...++...++ .+.||.+.. ...+..+.. ......-+++.
T Consensus 268 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~i~v~d~~~-~~~~~~~~~-~~~~v~~~~~s 343 (408)
T 4a11_B 268 RMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGS--TIAVYTVYS-GEQITMLKG-HYKTVDCCVFQ 343 (408)
T ss_dssp CEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETT--EEEEEETTT-CCEEEEECC-CSSCEEEEEEE
T ss_pred eEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCC--EEEEEECcC-Ccceeeecc-CCCeEEEEEEc
Confidence 68999998765432211 11000000111122222222333333333 788888871 123344431 11345667888
Q ss_pred eCCCEEEEEecccCCccccCCcEEEEEeCCCCce
Q 016891 305 KSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGA 338 (381)
Q Consensus 305 ~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~ 338 (381)
++|..|+.. ..+..+.+||+++.+.
T Consensus 344 ~~~~~l~s~---------~~dg~i~iw~~~~~~~ 368 (408)
T 4a11_B 344 SNFQELYSG---------SRDCNILAWVPSLYEP 368 (408)
T ss_dssp TTTTEEEEE---------ETTSCEEEEEECC---
T ss_pred CCCCEEEEE---------CCCCeEEEEeCCCCCc
Confidence 888844444 3556799999998876
No 132
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=68.42 E-value=65 Score=28.65 Aligned_cols=199 Identities=10% Similarity=0.045 Sum_probs=94.7
Q ss_pred cEEEEeeCCCcEEEEccCCcc------eeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcC
Q 016891 110 GLIAFKNDENGIALWNPSTEE------HLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLR 183 (381)
Q Consensus 110 GLl~~~~~~~~~~V~NP~T~~------~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~ 183 (381)
.+|+....+..+.|||..+++ ..........+ ......+.+.+..+.+-+ .. . ....+.+|+.+
T Consensus 127 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~l~-~~-~------~dg~v~iwd~~ 196 (416)
T 2pm9_A 127 NVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSS--VDEVISLAWNQSLAHVFA-SA-G------SSNFASIWDLK 196 (416)
T ss_dssp TBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCS--SCCCCEEEECSSCTTEEE-EE-S------SSSCEEEEETT
T ss_pred CEEEEEcCCCeEEEEECCCCccccccccccccccccCC--CCCeeEEEeCCCCCcEEE-EE-c------CCCCEEEEECC
Confidence 344444456789999998876 22221111111 112334555554333222 21 1 11458888888
Q ss_pred CCcEEEcccCCCccee--cCC-CcEEEC--C-eeEEEEeeCCCCCCcCEEEEEECCCCeeeeecCCCCCCCCCceeEEEE
Q 016891 184 TNSWRRIRVDFPYYIL--HGW-DGTFAD--G-HVHWLVTNNPEDYIENLIIAFNLKSEEFHEVPLPHLENRNDVLVMFVG 257 (381)
Q Consensus 184 t~~W~~~~~~~p~~~~--~~~-~~v~~n--G-~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~L~ 257 (381)
++.-...- ..+.... ... ..+.++ | .+...+..+.. ...|..+|+.+..-....+.. .+......+.
T Consensus 197 ~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~---~~~i~~~d~~~~~~~~~~~~~---~~~~~v~~~~ 269 (416)
T 2pm9_A 197 AKKEVIHL-SYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDN---DPSILIWDLRNANTPLQTLNQ---GHQKGILSLD 269 (416)
T ss_dssp TTEEEEEE-CCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSS---SCCCCEEETTSTTSCSBCCCS---CCSSCEEEEE
T ss_pred CCCcceEE-eccccccccCCceEEEEECCCCCCEEEEEECCCC---CceEEEEeCCCCCCCcEEeec---CccCceeEEE
Confidence 76543322 1110000 001 233332 3 33333333210 015778888764211111110 1111222333
Q ss_pred EE--CCeEEEEEecCCCceEEEEEECCceeEEEEecCCCCCeeEEEEEEeCC-CEEEEEecccCCccccCCcEEEEEeCC
Q 016891 258 NF--SGCLYFSCLCNYPQPVDIWVLMGCWTKTFSFPRSVGDYVKALAYSKSG-GKVLVDKFEYGEDEDINRWELFWYDLQ 334 (381)
Q Consensus 258 ~~--~G~L~~~~~~~~~~~~~iW~l~~~W~~~~~i~~~~~~~~~~~~~~~~g-~~i~l~~~~~~~~~~~~~~~l~~yd~~ 334 (381)
-. +|.+.+....++ .+.||.++. ...+..+.. ......-+.+.+++ . +++.. ..+..+.+||++
T Consensus 270 ~s~~~~~~l~s~~~dg--~v~~wd~~~-~~~~~~~~~-~~~~v~~~~~s~~~~~-~l~s~--------~~d~~i~iw~~~ 336 (416)
T 2pm9_A 270 WCHQDEHLLLSSGRDN--TVLLWNPES-AEQLSQFPA-RGNWCFKTKFAPEAPD-LFACA--------SFDNKIEVQTLQ 336 (416)
T ss_dssp ECSSCSSCEEEEESSS--EEEEECSSS-CCEEEEEEC-SSSCCCCEEECTTCTT-EEEEC--------CSSSEEEEEESC
T ss_pred eCCCCCCeEEEEeCCC--CEEEeeCCC-CccceeecC-CCCceEEEEECCCCCC-EEEEE--------ecCCcEEEEEcc
Confidence 33 567766666655 799998872 123334431 11223446677777 5 55552 456679999999
Q ss_pred CCce
Q 016891 335 NQGA 338 (381)
Q Consensus 335 t~~~ 338 (381)
+.+.
T Consensus 337 ~~~~ 340 (416)
T 2pm9_A 337 NLTN 340 (416)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 8775
No 133
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=68.31 E-value=69 Score=28.96 Aligned_cols=192 Identities=12% Similarity=0.083 Sum_probs=99.3
Q ss_pred CcEEEEeeCCCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCCcEE
Q 016891 109 NGLIAFKNDENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTNSWR 188 (381)
Q Consensus 109 ~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W~ 188 (381)
.+.|++.. ...+..+++.+++...+-... ....++.+|+..+ ++++.- . ....+..++..++..+
T Consensus 87 ~~~l~~~~-~~~I~~i~~~~~~~~~~~~~~------~~~~gl~~d~~~~--~ly~~D----~--~~~~I~r~~~~g~~~~ 151 (386)
T 3v65_B 87 EPVLLFAN-RIDIRQVLPHRSEYTLLLNNL------ENAIALDFHHRRE--LVFWSD----V--TLDRILRANLNGSNVE 151 (386)
T ss_dssp CCEEEEEC-BSCEEEECTTSCCCEEEECSC------SCEEEEEEETTTT--EEEEEE----T--TTTEEEEEETTSCCEE
T ss_pred cceeEeec-CccceeeccCCCcEEEEecCC------CccEEEEEecCCC--eEEEEe----C--CCCcEEEEecCCCCcE
Confidence 45555554 345777777666554432211 1245677787655 233221 1 1245677777766655
Q ss_pred EcccCCCcceecCCCcEEE---CCeeEEEEeeCCCCCCcCEEEEEECCCCeeeeecCCCCCCCCCceeEEEEE--ECCeE
Q 016891 189 RIRVDFPYYILHGWDGTFA---DGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEVPLPHLENRNDVLVMFVGN--FSGCL 263 (381)
Q Consensus 189 ~~~~~~p~~~~~~~~~v~~---nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~--~~G~L 263 (381)
.+. ... .... .++.+ +|.|||...... .|.++|+....-..+- ..... ....++. .+|.|
T Consensus 152 ~~~-~~~--~~~p-~glavd~~~g~lY~~d~~~~------~I~~~~~dg~~~~~l~-~~~l~----~P~giavdp~~g~l 216 (386)
T 3v65_B 152 EVV-STG--LESP-GGLAVDWVHDKLYWTDSGTS------RIEVANLDGAHRKVLL-WQSLE----KPRAIALHPMEGTI 216 (386)
T ss_dssp EEE-CSS--CSCC-CCEEEETTTTEEEEEETTTT------EEEECBTTSCSCEEEE-CSSCS----CEEEEEEETTTTEE
T ss_pred EEE-eCC--CCCc-cEEEEEeCCCeEEEEcCCCC------eEEEEeCCCCceEEee-cCCCC----CCcEEEEEcCCCeE
Confidence 443 111 1011 44444 589999876542 7999998765433331 11111 1223333 36788
Q ss_pred EEEEecCCCceEEEEEECCceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCceeeeeE
Q 016891 264 YFSCLCNYPQPVDIWVLMGCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGAAADQV 343 (381)
Q Consensus 264 ~~~~~~~~~~~~~iW~l~~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~~~~~v 343 (381)
++....... .+....++.+-.+. .+.... ....-+++.++++.||+.- .....|..+|+++... +.+
T Consensus 217 y~td~~~~~-~I~r~~~dG~~~~~-~~~~~~-~~PnGlavd~~~~~lY~aD--------~~~~~I~~~d~dG~~~--~~~ 283 (386)
T 3v65_B 217 YWTDWGNTP-RIEASSMDGSGRRI-IADTHL-FWPNGLTIDYAGRRMYWVD--------AKHHVIERANLDGSHR--KAV 283 (386)
T ss_dssp EEEECSSSC-EEEEEETTSCSCEE-EECSSC-SCEEEEEEEGGGTEEEEEE--------TTTTEEEEECTTSCSC--EEE
T ss_pred EEeccCCCC-EEEEEeCCCCCcEE-EEECCC-CCeeeEEEeCCCCEEEEEE--------CCCCEEEEEeCCCCee--EEE
Confidence 887654422 43333333322221 122111 2244566665566688882 3456799999987655 444
No 134
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=68.25 E-value=72 Score=29.13 Aligned_cols=200 Identities=12% Similarity=0.059 Sum_probs=101.7
Q ss_pred EEcccCcEEEEee-CCCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEc
Q 016891 104 IIDSCNGLIAFKN-DENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSL 182 (381)
Q Consensus 104 ~~~s~~GLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss 182 (381)
+.-..+|-|.+.+ ....+.++|+.+++...+...... .. +.+++..+ .++... ..+...+.+++.
T Consensus 136 la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~------~~-ia~~~~g~--~l~~~d-----~~~~~~I~~~d~ 201 (409)
T 3hrp_A 136 IAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKG------GK-PAVTKDKQ--RVYSIG-----WEGTHTVYVYMK 201 (409)
T ss_dssp EEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCB------CB-CEECTTSS--EEEEEB-----SSTTCEEEEEEG
T ss_pred EEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCC------Cc-eeEecCCC--cEEEEe-----cCCCceEEEEEc
Confidence 3334567776665 457899999999888776433111 11 33444333 222221 101126667776
Q ss_pred CCCc-EEEcccCCCc-ceecCCCcEEE---CCeeEEEEeeCCCCCCcCEEEEEECCCCeeeee-cCCCCCCCCCcee-E-
Q 016891 183 RTNS-WRRIRVDFPY-YILHGWDGTFA---DGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEV-PLPHLENRNDVLV-M- 254 (381)
Q Consensus 183 ~t~~-W~~~~~~~p~-~~~~~~~~v~~---nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~-~- 254 (381)
.++. .+.+. .... ..... .++.+ +|.||+ +... ..|..+|+.+.....+ ..+..... ... .
T Consensus 202 ~~~~~~~~~g-~~~~~~~~~p-~~iav~p~~g~lyv-~d~~------~~I~~~d~~~~~~~~~~~~~~~g~~--~~~P~~ 270 (409)
T 3hrp_A 202 ASGWAPTRIG-QLGSTFSGKI-GAVALDETEEWLYF-VDSN------KNFGRFNVKTQEVTLIKQLELSGSL--GTNPGP 270 (409)
T ss_dssp GGTTCEEEEE-ECCTTSCSCC-CBCEECTTSSEEEE-ECTT------CEEEEEETTTCCEEEEEECCCCSCC--CCSSCC
T ss_pred CCCceeEEee-eccchhcCCc-EEEEEeCCCCeEEE-EECC------CcEEEEECCCCCEEEEecccccCCC--CCCccc
Confidence 5542 33332 1111 11111 33443 689999 3222 2799999987766555 11111111 111 1
Q ss_pred EEEEE--CCeEEEEEecCCCceEEEEEEC--CceeEEEEecCCCC-----------CeeEEEEEEeCCCEEEEEecccCC
Q 016891 255 FVGNF--SGCLYFSCLCNYPQPVDIWVLM--GCWTKTFSFPRSVG-----------DYVKALAYSKSGGKVLVDKFEYGE 319 (381)
Q Consensus 255 ~L~~~--~G~L~~~~~~~~~~~~~iW~l~--~~W~~~~~i~~~~~-----------~~~~~~~~~~~g~~i~l~~~~~~~ 319 (381)
.++.. +|.|+++..... + |+.++ ..-..+.--....+ ....-+++.++|. |++..
T Consensus 271 ~ia~~p~~g~lyv~d~~~~--~--I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~-lyvad----- 340 (409)
T 3hrp_A 271 YLIYYFVDSNFYMSDQNLS--S--VYKITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN-FYIVD----- 340 (409)
T ss_dssp EEEEETTTTEEEEEETTTT--E--EEEECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC-EEEEE-----
T ss_pred cEEEeCCCCEEEEEeCCCC--E--EEEEecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC-EEEEe-----
Confidence 34444 588888765544 4 55555 33111111000000 1234456667788 88882
Q ss_pred cccc-CCcEEEEEeCCCCceeeeeE
Q 016891 320 DEDI-NRWELFWYDLQNQGAAADQV 343 (381)
Q Consensus 320 ~~~~-~~~~l~~yd~~t~~~~~~~v 343 (381)
. ....|..+|+.++++ ..+
T Consensus 341 ---~~~~~~I~~~~~~~G~v--~~~ 360 (409)
T 3hrp_A 341 ---GFKGYCLRKLDILDGYV--STV 360 (409)
T ss_dssp ---TTTTCEEEEEETTTTEE--EEE
T ss_pred ---CCCCCEEEEEECCCCEE--EEE
Confidence 4 456799999888888 666
No 135
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=68.11 E-value=57 Score=27.93 Aligned_cols=136 Identities=12% Similarity=0.055 Sum_probs=73.6
Q ss_pred eEEEEEEcCCCcEEEcccCCCcceecCCCcEE--ECCeeEEEEeeCCCCCCcCEEEEEECCCCeeeee-cCCCCCCCCCc
Q 016891 175 TEIAVYSLRTNSWRRIRVDFPYYILHGWDGTF--ADGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEV-PLPHLENRNDV 251 (381)
Q Consensus 175 ~~~~vyss~t~~W~~~~~~~p~~~~~~~~~v~--~nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~ 251 (381)
..+..|+..++.-+... . +... .++. -+|. +|++... .|..||+.+.+++.+ ..+..... .
T Consensus 35 ~~i~~~d~~~~~~~~~~-~-~~~~----~~i~~~~dG~-l~v~~~~-------~l~~~d~~~g~~~~~~~~~~~~~~--~ 98 (297)
T 3g4e_A 35 KKVCRWDSFTKQVQRVT-M-DAPV----SSVALRQSGG-YVATIGT-------KFCALNWKEQSAVVLATVDNDKKN--N 98 (297)
T ss_dssp TEEEEEETTTCCEEEEE-C-SSCE----EEEEEBTTSS-EEEEETT-------EEEEEETTTTEEEEEEECCTTCSS--E
T ss_pred CEEEEEECCCCcEEEEe-C-CCce----EEEEECCCCC-EEEEECC-------eEEEEECCCCcEEEEEecCCCCCC--C
Confidence 46777888776554433 1 1111 2233 2677 4555432 799999999888776 33222111 1
Q ss_pred eeEEEEEE-CCeEEEEEecCC-------CceEEEEEEC--CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCcc
Q 016891 252 LVMFVGNF-SGCLYFSCLCNY-------PQPVDIWVLM--GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDE 321 (381)
Q Consensus 252 ~~~~L~~~-~G~L~~~~~~~~-------~~~~~iW~l~--~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~ 321 (381)
..-.+... +|+|++...... ...-.||.++ ..-..+. .. . ....-+++.++|+.+++..
T Consensus 99 ~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~--~~-~-~~pngi~~spdg~~lyv~~------- 167 (297)
T 3g4e_A 99 RFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYF--DQ-V-DISNGLDWSLDHKIFYYID------- 167 (297)
T ss_dssp EEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEE--EE-E-SBEEEEEECTTSCEEEEEE-------
T ss_pred CCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEe--ec-c-ccccceEEcCCCCEEEEec-------
Confidence 11223333 689888775432 1246788888 3322211 10 1 1234566677888676662
Q ss_pred ccCCcEEEEEeC--CCCce
Q 016891 322 DINRWELFWYDL--QNQGA 338 (381)
Q Consensus 322 ~~~~~~l~~yd~--~t~~~ 338 (381)
.....|..||. +++++
T Consensus 168 -~~~~~i~~~~~d~~~G~~ 185 (297)
T 3g4e_A 168 -SLSYSVDAFDYDLQTGQI 185 (297)
T ss_dssp -GGGTEEEEEEECTTTCCE
T ss_pred -CCCCcEEEEeccCCCCcc
Confidence 33456888875 56655
No 136
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=67.95 E-value=59 Score=28.05 Aligned_cols=207 Identities=9% Similarity=-0.062 Sum_probs=101.7
Q ss_pred cCcEEEEee-CCCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCCc
Q 016891 108 CNGLIAFKN-DENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTNS 186 (381)
Q Consensus 108 ~~GLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~ 186 (381)
.+|-|.+.. ....++++||.+++...+..... ....++.+++.. . ++.... ........+.+|+..++.
T Consensus 54 ~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~-----~~~~~i~~~~dg-~--l~v~~~--~~~~~~~~i~~~d~~~~~ 123 (333)
T 2dg1_A 54 RQGQLFLLDVFEGNIFKINPETKEIKRPFVSHK-----ANPAAIKIHKDG-R--LFVCYL--GDFKSTGGIFAATENGDN 123 (333)
T ss_dssp TTSCEEEEETTTCEEEEECTTTCCEEEEEECSS-----SSEEEEEECTTS-C--EEEEEC--TTSSSCCEEEEECTTSCS
T ss_pred CCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCC-----CCcceEEECCCC-c--EEEEeC--CCCCCCceEEEEeCCCCE
Confidence 456555443 45679999999998776532111 123345556442 2 222211 000011367778877776
Q ss_pred EEEcccCCCcceecCC-CcEEE--CCeeEEEEeeCCCCCCcCEEEEEECCCCeeeeecCCCCCCCCCceeEEEEEE-CCe
Q 016891 187 WRRIRVDFPYYILHGW-DGTFA--DGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEVPLPHLENRNDVLVMFVGNF-SGC 262 (381)
Q Consensus 187 W~~~~~~~p~~~~~~~-~~v~~--nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~-~G~ 262 (381)
-+.+...... ... ..+.+ +|.+|+....+........|..+|..+.+...+.. ... ....+... +|+
T Consensus 124 ~~~~~~~~~~---~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~----~~~~i~~~~dg~ 194 (333)
T 2dg1_A 124 LQDIIEDLST---AYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQ--NIS----VANGIALSTDEK 194 (333)
T ss_dssp CEEEECSSSS---CCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEE--EES----SEEEEEECTTSS
T ss_pred EEEEEccCcc---CCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeec--CCC----cccceEECCCCC
Confidence 5432201110 011 23333 57777654321100111268889988766654421 000 11123333 564
Q ss_pred -EEEEEecCCCceEEEEEEC---CceeEEE-Eec-CCCC-CeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCC
Q 016891 263 -LYFSCLCNYPQPVDIWVLM---GCWTKTF-SFP-RSVG-DYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQN 335 (381)
Q Consensus 263 -L~~~~~~~~~~~~~iW~l~---~~W~~~~-~i~-~~~~-~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t 335 (381)
|++...... .+.+|.++ ....... .+. ...+ ....-+++.++|. |++.. .....|..||+++
T Consensus 195 ~l~v~~~~~~--~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~-l~v~~--------~~~~~v~~~d~~g 263 (333)
T 2dg1_A 195 VLWVTETTAN--RLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDN-LYVAM--------YGQGRVLVFNKRG 263 (333)
T ss_dssp EEEEEEGGGT--EEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCC-EEEEE--------ETTTEEEEECTTS
T ss_pred EEEEEeCCCC--eEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCC-EEEEE--------cCCCEEEEECCCC
Confidence 666654433 67777774 2222111 111 1011 2334466666777 77772 2346799999987
Q ss_pred CceeeeeEEEe
Q 016891 336 QGAAADQVTIH 346 (381)
Q Consensus 336 ~~~~~~~v~~~ 346 (381)
+.. +.+...
T Consensus 264 ~~~--~~~~~~ 272 (333)
T 2dg1_A 264 YPI--GQILIP 272 (333)
T ss_dssp CEE--EEEECT
T ss_pred CEE--EEEEcC
Confidence 777 776543
No 137
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=67.49 E-value=1e+02 Score=30.71 Aligned_cols=194 Identities=11% Similarity=0.040 Sum_probs=99.6
Q ss_pred cCcEEEEeeCCCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCCcE
Q 016891 108 CNGLIAFKNDENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTNSW 187 (381)
Q Consensus 108 ~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W 187 (381)
.+|-|-+......++.+||.++++..+.... ... ......+..|.. +. +++... ...+..|+..++.+
T Consensus 372 ~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~-~~~-~~~v~~i~~d~~-g~---lWigt~------~~Gl~~~~~~~~~~ 439 (781)
T 3v9f_A 372 GQGKLWIGTDGGGINVFENGKRVAIYNKENR-ELL-SNSVLCSLKDSE-GN---LWFGTY------LGNISYYNTRLKKF 439 (781)
T ss_dssp TTSCEEEEEBSSCEEEEETTEEEEECC------CC-CSBEEEEEECTT-SC---EEEEET------TEEEEEECSSSCEE
T ss_pred CCCCEEEEeCCCcEEEEECCCCeEEEccCCC-CCC-CcceEEEEECCC-CC---EEEEec------cCCEEEEcCCCCcE
Confidence 4566655554567888999888777653211 111 112333443422 21 233220 13577888888888
Q ss_pred EEcccCCCcceecCC-CcEEE--CCeeEEEEeeCCCCCCcCEEEEEECCCCeeeeecCCCCCCCCCceeEEEEEE-CCeE
Q 016891 188 RRIRVDFPYYILHGW-DGTFA--DGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEVPLPHLENRNDVLVMFVGNF-SGCL 263 (381)
Q Consensus 188 ~~~~~~~p~~~~~~~-~~v~~--nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~-~G~L 263 (381)
+... .. ...... .+++. +|. .|++... .|..||..+++|..+...............+.+- +|.|
T Consensus 440 ~~~~-~~--~~~~~~v~~i~~d~~g~-lwigt~~-------Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~l 508 (781)
T 3v9f_A 440 QIIE-LE--KNELLDVRVFYEDKNKK-IWIGTHA-------GVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRF 508 (781)
T ss_dssp EECC-ST--TTCCCCEEEEEECTTSE-EEEEETT-------EEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCE
T ss_pred EEec-cC--CCCCCeEEEEEECCCCC-EEEEECC-------ceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCE
Confidence 8765 21 111111 33333 355 4555443 6999999998887663222110001122334433 6788
Q ss_pred EEEEecCCCceEEEEEEC---CceeEEEEecC-CCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEE-EEEeCCCCce
Q 016891 264 YFSCLCNYPQPVDIWVLM---GCWTKTFSFPR-SVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWEL-FWYDLQNQGA 338 (381)
Q Consensus 264 ~~~~~~~~~~~~~iW~l~---~~W~~~~~i~~-~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l-~~yd~~t~~~ 338 (381)
.+.....+ |+.++ ..+..... .. .......-+....+|. |.+. +. ..+ +.||++++++
T Consensus 509 Wigt~~~G-----l~~~~~~~~~~~~~~~-~~~l~~~~i~~i~~d~~g~-lWi~---------T~-~Glv~~~d~~~~~~ 571 (781)
T 3v9f_A 509 WIGTFGGG-----VGIYTPDMQLVRKFNQ-YEGFCSNTINQIYRSSKGQ-MWLA---------TG-EGLVCFPSARNFDY 571 (781)
T ss_dssp EEEESSSC-----EEEECTTCCEEEEECT-TTTCSCSCEEEEEECTTSC-EEEE---------ET-TEEEEESCTTTCCC
T ss_pred EEEEcCCC-----EEEEeCCCCeEEEccC-CCCCCCCeeEEEEECCCCC-EEEE---------EC-CCceEEECCCCCcE
Confidence 87765333 33444 34433211 11 1222333344444566 8777 44 557 9999999988
Q ss_pred eeeeE
Q 016891 339 AADQV 343 (381)
Q Consensus 339 ~~~~v 343 (381)
+.+
T Consensus 572 --~~~ 574 (781)
T 3v9f_A 572 --QVF 574 (781)
T ss_dssp --EEE
T ss_pred --EEc
Confidence 766
No 138
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=67.29 E-value=64 Score=28.16 Aligned_cols=187 Identities=11% Similarity=0.101 Sum_probs=93.3
Q ss_pred EEEeeCCCcEEEEccCCcceeeC-CCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCC----Cc
Q 016891 112 IAFKNDENGIALWNPSTEEHLIL-PKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRT----NS 186 (381)
Q Consensus 112 l~~~~~~~~~~V~NP~T~~~~~L-P~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t----~~ 186 (381)
|++.. ...+.+.++.+++...+ |.. ....++.+|+..+ ++++.-. ....+..++..+ ..
T Consensus 4 ll~~~-~~~I~~i~~~~~~~~~~~~~~-------~~p~g~~~d~~~~--~ly~~D~------~~~~I~~~~~~g~~~~~~ 67 (316)
T 1ijq_A 4 LFFTN-RHEVRKMTLDRSEYTSLIPNL-------RNVVALDTEVASN--RIYWSDL------SQRMICSTQLDRAHGVSS 67 (316)
T ss_dssp EEEEC-BSSEEEEETTSCCCEEEECSC-------SSEEEEEEETTTT--EEEEEET------TTTEEEEEEC--------
T ss_pred EEEEC-CCeEEEEECCCcceEehhcCC-------CceEEEEEEeCCC--EEEEEEC------CCCcEEEEECCCCCCCcc
Confidence 34443 24567777777665543 322 1245677777655 2333211 114566666654 11
Q ss_pred EEEcccCCCcceecCCCcEEE---CCeeEEEEeeCCCCCCcCEEEEEECCCCeeeee-cCCCCCCCCCceeEEEEE--EC
Q 016891 187 WRRIRVDFPYYILHGWDGTFA---DGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEV-PLPHLENRNDVLVMFVGN--FS 260 (381)
Q Consensus 187 W~~~~~~~p~~~~~~~~~v~~---nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~~~L~~--~~ 260 (381)
-+.+- +...... .++.+ +|.|||...... .|.++|+....-..+ .. ... ....++. .+
T Consensus 68 ~~~~~---~~~~~~p-~glavd~~~~~ly~~d~~~~------~I~~~~~~g~~~~~~~~~--~~~----~P~~iavdp~~ 131 (316)
T 1ijq_A 68 YDTVI---SRDIQAP-DGLAVDWIHSNIYWTDSVLG------TVSVADTKGVKRKTLFRE--NGS----KPRAIVVDPVH 131 (316)
T ss_dssp CEEEE---CSSCSCC-CEEEEETTTTEEEEEETTTT------EEEEEETTSSSEEEEEEC--TTC----CEEEEEEETTT
T ss_pred cEEEE---eCCCCCc-CEEEEeecCCeEEEEECCCC------EEEEEeCCCCceEEEEEC--CCC----CcceEEeCCCC
Confidence 11111 1011111 44543 689999875542 799999986544433 21 111 1223443 36
Q ss_pred CeEEEEEecCCCceEEEEEECCceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCceee
Q 016891 261 GCLYFSCLCNYPQPVDIWVLMGCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGAAA 340 (381)
Q Consensus 261 G~L~~~~~~~~~~~~~iW~l~~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~~~ 340 (381)
|.|++....... .+....++.+-.+.. +...+ ....-+++..+++.||+.- .....|..+|+++...
T Consensus 132 g~ly~~d~~~~~-~I~~~~~dG~~~~~~-~~~~~-~~P~gla~d~~~~~lY~~D--------~~~~~I~~~d~dg~~~-- 198 (316)
T 1ijq_A 132 GFMYWTDWGTPA-KIKKGGLNGVDIYSL-VTENI-QWPNGITLDLLSGRLYWVD--------SKLHSISSIDVNGGNR-- 198 (316)
T ss_dssp TEEEEEECSSSC-EEEEEETTSCCEEEE-ECSSC-SCEEEEEEETTTTEEEEEE--------TTTTEEEEEETTSCSC--
T ss_pred CEEEEEccCCCC-eEEEEcCCCCCeEEE-EECCC-CCceEEEEeccCCEEEEEE--------CCCCeEEEEecCCCce--
Confidence 788887654312 443333443322221 11111 2344566665666688882 3446799999987666
Q ss_pred eeE
Q 016891 341 DQV 343 (381)
Q Consensus 341 ~~v 343 (381)
+.+
T Consensus 199 ~~~ 201 (316)
T 1ijq_A 199 KTI 201 (316)
T ss_dssp EEE
T ss_pred EEE
Confidence 555
No 139
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=66.71 E-value=65 Score=29.80 Aligned_cols=112 Identities=11% Similarity=0.054 Sum_probs=60.1
Q ss_pred CcEEEC-----CeeEEEEeeCCCCCCcCEEEEEECCCCeeeeecCCCCCCCCCceeEEEEE-ECCeEEEEEecCCCceEE
Q 016891 203 DGTFAD-----GHVHWLVTNNPEDYIENLIIAFNLKSEEFHEVPLPHLENRNDVLVMFVGN-FSGCLYFSCLCNYPQPVD 276 (381)
Q Consensus 203 ~~v~~n-----G~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~-~~G~L~~~~~~~~~~~~~ 276 (381)
.++.++ |.|||.... ..|..+|+.+.+.+.+..+.. ....++. .+|.|+++........-.
T Consensus 142 ~gvavd~~s~~g~Lyv~D~~-------~~I~~id~~~g~v~~~~~~~~------~P~giavd~dG~lyVad~~~~~~~~g 208 (433)
T 4hw6_A 142 WRMMFDPNSNYDDLYWVGQR-------DAFRHVDFVNQYVDIKTTNIG------QCADVNFTLNGDMVVVDDQSSDTNTG 208 (433)
T ss_dssp CEEEECTTTTTCEEEEECBT-------SCEEEEETTTTEEEEECCCCS------CEEEEEECTTCCEEEEECCSCTTSEE
T ss_pred ceEEEccccCCCEEEEEeCC-------CCEEEEECCCCEEEEeecCCC------CccEEEECCCCCEEEEcCCCCcccce
Confidence 677776 899997654 179999998888776633211 1223433 367788877643211233
Q ss_pred EEEEC--CceeEEEEecCCCCCeeEEEEEEe-CCCEEEEEecccCCccccCCcEEEEEeCCCCce
Q 016891 277 IWVLM--GCWTKTFSFPRSVGDYVKALAYSK-SGGKVLVDKFEYGEDEDINRWELFWYDLQNQGA 338 (381)
Q Consensus 277 iW~l~--~~W~~~~~i~~~~~~~~~~~~~~~-~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~ 338 (381)
+..+. ..|.....+.. . ....-+++.+ +|. |++.. .....|+.||+++++.
T Consensus 209 v~~~~~~~~~~~~~~~~~-~-~~P~giavd~~~G~-lyv~d--------~~~~~V~~~d~~~g~~ 262 (433)
T 4hw6_A 209 IYLFTRASGFTERLSLCN-A-RGAKTCAVHPQNGK-IYYTR--------YHHAMISSYDPATGTL 262 (433)
T ss_dssp EEEECGGGTTCCEEEEEE-C-SSBCCCEECTTTCC-EEECB--------TTCSEEEEECTTTCCE
T ss_pred EEEEECCCCeeccccccc-c-CCCCEEEEeCCCCe-EEEEE--------CCCCEEEEEECCCCeE
Confidence 43444 34432122221 0 1122245555 455 77662 2344677787775554
No 140
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=66.38 E-value=56 Score=27.94 Aligned_cols=100 Identities=13% Similarity=0.101 Sum_probs=55.4
Q ss_pred EEEEEECCCCeeeeecCCCCCCCCCceeEEEEEE-CCeEEEEEecCCCceEEEEEECCceeEEEEecCCCCCeeEEEEEE
Q 016891 226 LIIAFNLKSEEFHEVPLPHLENRNDVLVMFVGNF-SGCLYFSCLCNYPQPVDIWVLMGCWTKTFSFPRSVGDYVKALAYS 304 (381)
Q Consensus 226 ~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~-~G~L~~~~~~~~~~~~~iW~l~~~W~~~~~i~~~~~~~~~~~~~~ 304 (381)
.|..+|+.+.+...+..+.... ....+... +|+..++. +. .+.+|.++ ....+..+. .+....-+++.
T Consensus 220 ~v~~~d~~~~~~~~~~~~~~~~----~~~~~~~s~dg~~l~~~--~~--~v~~~d~~-~~~~~~~~~--~~~~~~~~~~s 288 (337)
T 1pby_B 220 GLLTMDLETGEMAMREVRIMDV----FYFSTAVNPAKTRAFGA--YN--VLESFDLE-KNASIKRVP--LPHSYYSVNVS 288 (337)
T ss_dssp EEEEEETTTCCEEEEEEEECSS----CEEEEEECTTSSEEEEE--ES--EEEEEETT-TTEEEEEEE--CSSCCCEEEEC
T ss_pred ceEEEeCCCCCceEeecCCCCC----ceeeEEECCCCCEEEEe--CC--eEEEEECC-CCcCcceec--CCCceeeEEEC
Confidence 5789999887765443332211 11123333 56544443 22 77777776 122233333 11223456777
Q ss_pred eCCCEEEEEecccCCccccCCcEEEEEeCCCCceeeeeEEEe
Q 016891 305 KSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGAAADQVTIH 346 (381)
Q Consensus 305 ~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~~~~~v~~~ 346 (381)
++|+.|++. .....+.+||+++++.- +.+...
T Consensus 289 ~dg~~l~~~---------~~~~~i~v~d~~~~~~~-~~~~~~ 320 (337)
T 1pby_B 289 TDGSTVWLG---------GALGDLAAYDAETLEKK-GQVDLP 320 (337)
T ss_dssp TTSCEEEEE---------SBSSEEEEEETTTCCEE-EEEECG
T ss_pred CCCCEEEEE---------cCCCcEEEEECcCCcEE-EEEEcC
Confidence 888866666 34567999999988761 445444
No 141
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=65.74 E-value=63 Score=27.55 Aligned_cols=182 Identities=10% Similarity=0.069 Sum_probs=92.2
Q ss_pred EeeCCCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCCcEEEcccC
Q 016891 114 FKNDENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTNSWRRIRVD 193 (381)
Q Consensus 114 ~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W~~~~~~ 193 (381)
....+..+.||+..+++....-.. + ......+.+.+.. .+ +.... . ...+.+|+.+++.-...-..
T Consensus 40 s~~~dg~i~iw~~~~~~~~~~~~~---h--~~~v~~~~~~~~~-~~--l~s~~--~----d~~i~vwd~~~~~~~~~~~~ 105 (312)
T 4ery_A 40 SSSADKLIKIWGAYDGKFEKTISG---H--KLGISDVAWSSDS-NL--LVSAS--D----DKTLKIWDVSSGKCLKTLKG 105 (312)
T ss_dssp EEETTSCEEEEETTTCCEEEEECC---C--SSCEEEEEECTTS-SE--EEEEE--T----TSEEEEEETTTCCEEEEEEC
T ss_pred EeeCCCeEEEEeCCCcccchhhcc---C--CCceEEEEEcCCC-CE--EEEEC--C----CCEEEEEECCCCcEEEEEcC
Confidence 333456788888888776543211 1 1123345555532 22 22221 1 15688888877643211101
Q ss_pred CCcceecCCCcEEE--CCeeEEEEeeCCCCCCcCEEEEEECCCCeee-eecCCCCCCCCCceeEEEEEE-CCeEEEEEec
Q 016891 194 FPYYILHGWDGTFA--DGHVHWLVTNNPEDYIENLIIAFNLKSEEFH-EVPLPHLENRNDVLVMFVGNF-SGCLYFSCLC 269 (381)
Q Consensus 194 ~p~~~~~~~~~v~~--nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~-~i~~P~~~~~~~~~~~~L~~~-~G~L~~~~~~ 269 (381)
..... ..+.+ +|.+...+..+. .|..+|+.+.+.. .+..... ....+.-. +|.+.+....
T Consensus 106 ~~~~v----~~~~~~~~~~~l~s~~~d~------~i~iwd~~~~~~~~~~~~~~~------~v~~~~~~~~~~~l~~~~~ 169 (312)
T 4ery_A 106 HSNYV----FCCNFNPQSNLIVSGSFDE------SVRIWDVKTGKCLKTLPAHSD------PVSAVHFNRDGSLIVSSSY 169 (312)
T ss_dssp CSSCE----EEEEECSSSSEEEEEETTS------CEEEEETTTCCEEEEECCCSS------CEEEEEECTTSSEEEEEET
T ss_pred CCCCE----EEEEEcCCCCEEEEEeCCC------cEEEEECCCCEEEEEecCCCC------cEEEEEEcCCCCEEEEEeC
Confidence 10000 11111 343333333332 6889999876542 2222111 11223322 5777666666
Q ss_pred CCCceEEEEEEC-CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCce
Q 016891 270 NYPQPVDIWVLM-GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGA 338 (381)
Q Consensus 270 ~~~~~~~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~ 338 (381)
++ .+.+|.+. .+-. ..+..........+.+.+++..|+.. ..+..+.+||+++.+.
T Consensus 170 d~--~i~~wd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~---------~~d~~i~iwd~~~~~~ 226 (312)
T 4ery_A 170 DG--LCRIWDTASGQCL--KTLIDDDNPPVSFVKFSPNGKYILAA---------TLDNTLKLWDYSKGKC 226 (312)
T ss_dssp TS--CEEEEETTTCCEE--EEECCSSCCCEEEEEECTTSSEEEEE---------ETTTEEEEEETTTTEE
T ss_pred CC--cEEEEECCCCcee--eEEeccCCCceEEEEECCCCCEEEEE---------cCCCeEEEEECCCCcE
Confidence 55 79999988 3322 22221111235567777888855554 4566899999998876
No 142
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=65.39 E-value=65 Score=27.58 Aligned_cols=133 Identities=11% Similarity=0.102 Sum_probs=64.2
Q ss_pred eEEEEEEcCCCcEEEcccCCCcceecCCCcEEE--CCeeEEEEeeCCCCCCcCEEEEEECCCCeeeee-cCCCCCCCCCc
Q 016891 175 TEIAVYSLRTNSWRRIRVDFPYYILHGWDGTFA--DGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEV-PLPHLENRNDV 251 (381)
Q Consensus 175 ~~~~vyss~t~~W~~~~~~~p~~~~~~~~~v~~--nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~ 251 (381)
..+.+|+.+++.-...-....... .++.+ +|.+...+..+. .|..+|+.+.+-... ....
T Consensus 195 ~~i~i~d~~~~~~~~~~~~h~~~v----~~~~~s~~~~~l~s~s~Dg------~i~iwd~~~~~~~~~~~~~~------- 257 (340)
T 4aow_A 195 KLVKVWNLANCKLKTNHIGHTGYL----NTVTVSPDGSLCASGGKDG------QAMLWDLNEGKHLYTLDGGD------- 257 (340)
T ss_dssp SCEEEEETTTTEEEEEECCCSSCE----EEEEECTTSSEEEEEETTC------EEEEEETTTTEEEEEEECSS-------
T ss_pred CEEEEEECCCCceeeEecCCCCcE----EEEEECCCCCEEEEEeCCC------eEEEEEeccCceeeeecCCc-------
Confidence 456777777664432220111111 22322 455444443332 788999987654322 2211
Q ss_pred eeEEEEEECCeEEEEEecCCCceEEEEEEC-CceeEEEEec------C--CCCCeeEEEEEEeCCCEEEEEecccCCccc
Q 016891 252 LVMFVGNFSGCLYFSCLCNYPQPVDIWVLM-GCWTKTFSFP------R--SVGDYVKALAYSKSGGKVLVDKFEYGEDED 322 (381)
Q Consensus 252 ~~~~L~~~~G~L~~~~~~~~~~~~~iW~l~-~~W~~~~~i~------~--~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~ 322 (381)
....+.-..+...++...++ .+.||.++ ..-. ..+. . .......-+++.++|. .++.+
T Consensus 258 ~v~~~~~~~~~~~~~~~~d~--~i~iwd~~~~~~~--~~~~~~~~~~~~~~h~~~v~~l~~s~dg~-~l~sg-------- 324 (340)
T 4aow_A 258 IINALCFSPNRYWLCAATGP--SIKIWDLEGKIIV--DELKQEVISTSSKAEPPQCTSLAWSADGQ-TLFAG-------- 324 (340)
T ss_dssp CEEEEEECSSSSEEEEEETT--EEEEEETTTTEEE--EEECCC-------CCCCCEEEEEECTTSS-EEEEE--------
T ss_pred eEEeeecCCCCceeeccCCC--EEEEEECCCCeEE--EeccccceeeeccCCCCCEEEEEECCCCC-EEEEE--------
Confidence 11223333333333333334 78999887 2211 1111 0 0113345567778888 44442
Q ss_pred cCCcEEEEEeCCCCc
Q 016891 323 INRWELFWYDLQNQG 337 (381)
Q Consensus 323 ~~~~~l~~yd~~t~~ 337 (381)
..+..|.+||++|++
T Consensus 325 s~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 325 YTDNLVRVWQVTIGT 339 (340)
T ss_dssp ETTSCEEEEEEEC--
T ss_pred eCCCEEEEEeCCCcC
Confidence 355679999998864
No 143
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=64.11 E-value=1.2e+02 Score=30.11 Aligned_cols=117 Identities=10% Similarity=0.117 Sum_probs=66.8
Q ss_pred ECCeeEEEEeeCCCCCCcCEEEEEECCC--CeeeeecCCCCCCCCCceeEEEEEECCeEEEEEecCCCceEEEEEEC--C
Q 016891 207 ADGHVHWLVTNNPEDYIENLIIAFNLKS--EEFHEVPLPHLENRNDVLVMFVGNFSGCLYFSCLCNYPQPVDIWVLM--G 282 (381)
Q Consensus 207 ~nG~lYwl~~~~~~~~~~~~i~~fD~~~--e~~~~i~~P~~~~~~~~~~~~L~~~~G~L~~~~~~~~~~~~~iW~l~--~ 282 (381)
-++.||+....+. ....|..+|+.+ +.|+.+- |.... ....+...++.|++....++ ...||.++ .
T Consensus 326 dg~~l~~~s~~~~---~~~~l~~~d~~~~~~~~~~l~-~~~~~----~l~~~~~~~~~lv~~~~~dg--~~~l~~~~~~g 395 (741)
T 1yr2_A 326 VGDQLWFVSGDGA---PLKKIVRVDLSGSTPRFDTVV-PESKD----NLESVGIAGNRLFASYIHDA--KSQVLAFDLDG 395 (741)
T ss_dssp ETTEEEEEECTTC---TTCEEEEEECSSSSCEEEEEE-CCCSS----EEEEEEEEBTEEEEEEEETT--EEEEEEEETTS
T ss_pred cCCEEEEEECCCC---CCCEEEEEeCCCCccccEEEe-cCCCC----eEEEEEEECCEEEEEEEECC--EEEEEEEeCCC
Confidence 3556777765431 124799999987 5787662 22211 11123344788887777666 66788876 3
Q ss_pred ceeEEEEec-CCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCceeeeeE
Q 016891 283 CWTKTFSFP-RSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGAAADQV 343 (381)
Q Consensus 283 ~W~~~~~i~-~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~~~~~v 343 (381)
. ....+. +.. .....+...++++.|++..... .....++.||+.+++. +.+
T Consensus 396 ~--~~~~l~~~~~-~~v~~~~~s~d~~~l~~~~ss~-----~~P~~i~~~d~~tg~~--~~l 447 (741)
T 1yr2_A 396 K--PAGAVSLPGI-GSASGLSGRPGDRHAYLSFSSF-----TQPATVLALDPATAKT--TPW 447 (741)
T ss_dssp C--EEEECBCSSS-CEEEEEECCBTCSCEEEEEEET-----TEEEEEEEEETTTTEE--EEC
T ss_pred C--ceeeccCCCC-eEEEEeecCCCCCEEEEEEcCC-----CCCCEEEEEECCCCcE--EEE
Confidence 2 333444 111 2233344455676576662111 2345799999999887 555
No 144
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=63.92 E-value=78 Score=27.95 Aligned_cols=189 Identities=12% Similarity=0.009 Sum_probs=88.9
Q ss_pred cCcEEEEe-eCCCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCCc
Q 016891 108 CNGLIAFK-NDENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTNS 186 (381)
Q Consensus 108 ~~GLl~~~-~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~ 186 (381)
.+|-.++. ..+..+.|||..+++....-.. +. .....+.+.+....+ ++.. . . ...+.+|+.+++.
T Consensus 137 pdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~---h~--~~V~~~~~~~~~~~~-l~s~-s--~----D~~v~iwd~~~~~ 203 (344)
T 4gqb_B 137 SSGTQAVSGSKDICIKVWDLAQQVVLSSYRA---HA--AQVTCVAASPHKDSV-FLSC-S--E----DNRILLWDTRCPK 203 (344)
T ss_dssp TTSSEEEEEETTSCEEEEETTTTEEEEEECC---CS--SCEEEEEECSSCTTE-EEEE-E--T----TSCEEEEETTSSS
T ss_pred CCCCEEEEEeCCCeEEEEECCCCcEEEEEcC---cC--CceEEEEecCCCCCc-eeee-c--c----ccccccccccccc
Confidence 34544433 3566789999988876553211 11 123344444443332 2211 1 1 1457788887764
Q ss_pred EEE-cccCCCcceecCCCcEEE---CCeeEEEEeeCCCCCCcCEEEEEECCCCeee-eecCCCCCCCCCceeEEEEEE-C
Q 016891 187 WRR-IRVDFPYYILHGWDGTFA---DGHVHWLVTNNPEDYIENLIIAFNLKSEEFH-EVPLPHLENRNDVLVMFVGNF-S 260 (381)
Q Consensus 187 W~~-~~~~~p~~~~~~~~~v~~---nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~-~i~~P~~~~~~~~~~~~L~~~-~ 260 (381)
-.. +....+. . .-.++.+ ++.+...+..+. .|-.+|+.+.+.. .+.... .....+.-. +
T Consensus 204 ~~~~~~~~~~~-~--~~~~~~~~p~~~~~l~sg~~dg------~v~~wd~~~~~~~~~~~~h~------~~v~~v~fsp~ 268 (344)
T 4gqb_B 204 PASQIGCSAPG-Y--LPTSLAWHPQQSEVFVFGDENG------TVSLVDTKSTSCVLSSAVHS------QCVTGLVFSPH 268 (344)
T ss_dssp CEEECC----C-C--CEEEEEECSSCTTEEEEEETTS------EEEEEESCC--CCEEEECCS------SCEEEEEECSS
T ss_pred eeeeeecceee-c--cceeeeecCCCCcceEEeccCC------cEEEEECCCCcEEEEEcCCC------CCEEEEEEccC
Confidence 322 2100000 0 0022222 233333333332 7888998875432 222111 112233333 4
Q ss_pred C-eEEEEEecCCCceEEEEEEC-CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCce
Q 016891 261 G-CLYFSCLCNYPQPVDIWVLM-GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGA 338 (381)
Q Consensus 261 G-~L~~~~~~~~~~~~~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~ 338 (381)
| ++.+.+..++ .+.||-++ .+ ...+.. -.....-+++.++|..++... ..+..|.+|++.++..
T Consensus 269 g~~~lasgs~D~--~i~vwd~~~~~---~~~~~~-H~~~V~~v~~sp~~~~llas~--------s~D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 269 SVPFLASLSEDC--SLAVLDSSLSE---LFRSQA-HRDFVRDATWSPLNHSLLTTV--------GWDHQVVHHVVPTEPL 334 (344)
T ss_dssp SSCCEEEEETTS--CEEEECTTCCE---EEEECC-CSSCEEEEEECSSSTTEEEEE--------ETTSCEEEEECCC---
T ss_pred CCeEEEEEeCCC--eEEEEECCCCc---EEEEcC-CCCCEEEEEEeCCCCeEEEEE--------cCCCeEEEEECCCCCC
Confidence 5 4444455444 79999777 32 222221 113455667777776566552 3456799999988776
No 145
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=63.36 E-value=1.1e+02 Score=29.70 Aligned_cols=156 Identities=7% Similarity=0.031 Sum_probs=77.4
Q ss_pred eEEEEEEcCCCcEEEcccCCCcceecCCCcEEE--CCe-eEEEEeeCCCCCCcCEEEEEECCCC-eeeeecCCCCCCC-C
Q 016891 175 TEIAVYSLRTNSWRRIRVDFPYYILHGWDGTFA--DGH-VHWLVTNNPEDYIENLIIAFNLKSE-EFHEVPLPHLENR-N 249 (381)
Q Consensus 175 ~~~~vyss~t~~W~~~~~~~p~~~~~~~~~v~~--nG~-lYwl~~~~~~~~~~~~i~~fD~~~e-~~~~i~~P~~~~~-~ 249 (381)
..+.+++..++.-+.+.......... ..+.+ +|. |+....+.. .....|..+|+.+. ....+........ .
T Consensus 235 ~~l~~~d~~~~~~~~~~~~~~~~~~~--~~~~~spdg~~l~~~~~~~~--~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~ 310 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQTGEPKEKFL--TNLSWSPDENILYVAEVNRA--QNECKVNAYDAETGRFVRTLFVETDKHYVE 310 (706)
T ss_dssp EEEEEEETTTTEEEECCCCSCTTCEE--EEEEECTTSSEEEEEEECTT--SCEEEEEEEETTTCCEEEEEEEEECSSCCC
T ss_pred eEEEEEECCCCceEeeccCCCCceeE--eeEEEECCCCEEEEEEeCCC--CCeeEEEEEECCCCceeeEEEEccCCCeEC
Confidence 67889998888765554111100000 12222 565 555443321 12237889999887 6655421111000 0
Q ss_pred CceeEEEEEE--CCeEEEEEecCCCceEEEEEECCceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcE
Q 016891 250 DVLVMFVGNF--SGCLYFSCLCNYPQPVDIWVLMGCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWE 327 (381)
Q Consensus 250 ~~~~~~L~~~--~G~L~~~~~~~~~~~~~iW~l~~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~ 327 (381)
....+.. .- +|++.++...++ ...||.++..-.....+.........++++.++|+.|++.... .......
T Consensus 311 ~~~~~~~-sp~~dg~~l~~~~~~g--~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~----~~~~~~~ 383 (706)
T 2z3z_A 311 PLHPLTF-LPGSNNQFIWQSRRDG--WNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTE----ASPLERH 383 (706)
T ss_dssp CCSCCEE-CTTCSSEEEEEECTTS--SCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESS----SCTTCBE
T ss_pred ccCCcee-ecCCCCEEEEEEccCC--ccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecC----CCCceEE
Confidence 0001111 22 677555444433 6789988711123334431111223346778888877777410 0001247
Q ss_pred EEEEeCCCCceeeeeE
Q 016891 328 LFWYDLQNQGAAADQV 343 (381)
Q Consensus 328 l~~yd~~t~~~~~~~v 343 (381)
|+.+|+++++. +.+
T Consensus 384 l~~~d~~~~~~--~~l 397 (706)
T 2z3z_A 384 FYCIDIKGGKT--KDL 397 (706)
T ss_dssp EEEEETTCCCC--EES
T ss_pred EEEEEcCCCCc--eec
Confidence 99999998887 666
No 146
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=62.89 E-value=1e+02 Score=29.04 Aligned_cols=135 Identities=10% Similarity=-0.063 Sum_probs=71.1
Q ss_pred eEEEEEEcCCCcEEEcccCCCcceecCC-CcEEE--CCeeEEEEeeCCCCCCcCEEEEEECCCCeeeeecCCCCCCCCCc
Q 016891 175 TEIAVYSLRTNSWRRIRVDFPYYILHGW-DGTFA--DGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEVPLPHLENRNDV 251 (381)
Q Consensus 175 ~~~~vyss~t~~W~~~~~~~p~~~~~~~-~~v~~--nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~ 251 (381)
..+.+|+..++.... . .... .... ..+.+ +|.+-..+..+. .|..+|+.+.+-... +.... . .
T Consensus 467 ~~i~~~~~~~~~~~~-~-~~~~--~~~~v~~~~~s~~g~~l~~~~~dg------~i~iw~~~~~~~~~~-~~~~h-~--~ 532 (615)
T 1pgu_A 467 NTIQVFKLSDLEVSF-D-LKTP--LRAKPSYISISPSETYIAAGDVMG------KILLYDLQSREVKTS-RWAFR-T--S 532 (615)
T ss_dssp SCEEEEETTEEEEEE-E-CSSC--CSSCEEEEEECTTSSEEEEEETTS------CEEEEETTTTEEEEC-CSCCC-S--S
T ss_pred CeEEEEECCCccccc-c-ccCC--ccCceEEEEECCCCCEEEEcCCCC------eEEEeeCCCCcceeE-eecCC-C--C
Confidence 457778877765432 1 1110 0001 23333 566555444432 689999987655332 21100 0 1
Q ss_pred eeEEEEEE-----------CCeEEEEEecCCCceEEEEEECCceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCc
Q 016891 252 LVMFVGNF-----------SGCLYFSCLCNYPQPVDIWVLMGCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGED 320 (381)
Q Consensus 252 ~~~~L~~~-----------~G~L~~~~~~~~~~~~~iW~l~~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~ 320 (381)
.-..+.-. +|++.+....++ .+.||.++..-..+..+.. ......-+.+.++|. |+..
T Consensus 533 ~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg--~i~iw~~~~~~~~~~~~~~-h~~~v~~l~~s~~~~-l~s~------- 601 (615)
T 1pgu_A 533 KINAISWKPAEKGANEEEIEEDLVATGSLDT--NIFIYSVKRPMKIIKALNA-HKDGVNNLLWETPST-LVSS------- 601 (615)
T ss_dssp CEEEEEECCCC------CCSCCEEEEEETTS--CEEEEESSCTTCCEEETTS-STTCEEEEEEEETTE-EEEE-------
T ss_pred ceeEEEEcCccccccccccCCCEEEEEcCCC--cEEEEECCCCceechhhhc-CccceEEEEEcCCCC-eEEe-------
Confidence 12223222 577777766665 7999999821133333431 113456677788887 6655
Q ss_pred cccCCcEEEEEeCCCC
Q 016891 321 EDINRWELFWYDLQNQ 336 (381)
Q Consensus 321 ~~~~~~~l~~yd~~t~ 336 (381)
..+..+.+||++++
T Consensus 602 --~~d~~v~iw~~~~~ 615 (615)
T 1pgu_A 602 --GADACIKRWNVVLE 615 (615)
T ss_dssp --ETTSCEEEEEEC--
T ss_pred --cCCceEEEEeeecC
Confidence 35567999998763
No 147
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=61.73 E-value=94 Score=28.18 Aligned_cols=194 Identities=8% Similarity=0.071 Sum_probs=93.0
Q ss_pred EEEEeeCCCcEEEEccCCcce--eeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCCc-E
Q 016891 111 LIAFKNDENGIALWNPSTEEH--LILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTNS-W 187 (381)
Q Consensus 111 Ll~~~~~~~~~~V~NP~T~~~--~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~-W 187 (381)
+|+.......+.||+..++.. ..+.+.............+.+.+..+.+-+.+- ....+.+|+.+++. .
T Consensus 196 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~--------~dg~i~i~d~~~~~~~ 267 (430)
T 2xyi_A 196 YLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVA--------DDQKLMIWDTRNNNTS 267 (430)
T ss_dssp EEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEE--------TTSEEEEEETTCSCSS
T ss_pred eEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEe--------CCCeEEEEECCCCCCC
Confidence 565555667889999877321 111111000011122444555654443222211 11578899988652 1
Q ss_pred EEcccCCCcceecCC-CcEEEC--Ce-eEEEEeeCCCCCCcCEEEEEECCCCe--eeeecCCCCCCCCCceeEEEEEE-C
Q 016891 188 RRIRVDFPYYILHGW-DGTFAD--GH-VHWLVTNNPEDYIENLIIAFNLKSEE--FHEVPLPHLENRNDVLVMFVGNF-S 260 (381)
Q Consensus 188 ~~~~~~~p~~~~~~~-~~v~~n--G~-lYwl~~~~~~~~~~~~i~~fD~~~e~--~~~i~~P~~~~~~~~~~~~L~~~-~ 260 (381)
+.+. .. ...... ..+.++ |. ++..+..+. .|..+|+.+.. ...+.... .....+.-. +
T Consensus 268 ~~~~-~~--~~~~~~v~~i~~~p~~~~~l~tg~~dg------~v~vwd~~~~~~~~~~~~~h~------~~v~~i~~sp~ 332 (430)
T 2xyi_A 268 KPSH-TV--DAHTAEVNCLSFNPYSEFILATGSADK------TVALWDLRNLKLKLHSFESHK------DEIFQVQWSPH 332 (430)
T ss_dssp SCSE-EE--ECCSSCEEEEEECSSCTTEEEEEETTS------EEEEEETTCTTSCSEEEECCS------SCEEEEEECSS
T ss_pred ccee-Ee--ecCCCCeEEEEeCCCCCCEEEEEeCCC------eEEEEeCCCCCCCeEEeecCC------CCEEEEEECCC
Confidence 1111 00 000001 334443 43 455554442 79999998632 22222111 112233333 3
Q ss_pred C-eEEEEEecCCCceEEEEEEC--Cc-----------eeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCc
Q 016891 261 G-CLYFSCLCNYPQPVDIWVLM--GC-----------WTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRW 326 (381)
Q Consensus 261 G-~L~~~~~~~~~~~~~iW~l~--~~-----------W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~ 326 (381)
| .+.+.+..++ .+.||.+. .. -..+..... ......-+.+.+++..+++.. ....
T Consensus 333 ~~~~l~s~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~p~~~~~l~s~--------s~dg 401 (430)
T 2xyi_A 333 NETILASSGTDR--RLHVWDLSKIGEEQSTEDAEDGPPELLFIHGG-HTAKISDFSWNPNEPWIICSV--------SEDN 401 (430)
T ss_dssp CTTEEEEEETTS--CCEEEEGGGTTCCCCHHHHHHCCTTEEEECCC-CSSCEEEEEECSSSTTEEEEE--------ETTS
T ss_pred CCCEEEEEeCCC--cEEEEeCCCCccccCccccccCCcceEEEcCC-CCCCceEEEECCCCCCEEEEE--------ECCC
Confidence 5 4566665555 79999987 11 122232221 113356667777777344442 3556
Q ss_pred EEEEEeCCCCce
Q 016891 327 ELFWYDLQNQGA 338 (381)
Q Consensus 327 ~l~~yd~~t~~~ 338 (381)
.|.+|++.++.+
T Consensus 402 ~i~iw~~~~~~~ 413 (430)
T 2xyi_A 402 IMQVWQMAENVY 413 (430)
T ss_dssp EEEEEEECHHHH
T ss_pred CEEEeEcccccc
Confidence 799999988777
No 148
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=61.53 E-value=46 Score=28.73 Aligned_cols=67 Identities=7% Similarity=-0.028 Sum_probs=41.3
Q ss_pred CCeEEEEEecCCCceEEEEEEC-CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCce
Q 016891 260 SGCLYFSCLCNYPQPVDIWVLM-GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGA 338 (381)
Q Consensus 260 ~G~L~~~~~~~~~~~~~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~ 338 (381)
++.+++....+. .+.+|.++ .+..+...++... ...-+++.++|+.+++.. .....+..||+++++.
T Consensus 10 ~~~~~v~~~~~~--~v~~~d~~~~~~~~~~~~~~~~--~~~~~~~s~dg~~~~v~~--------~~~~~i~~~d~~t~~~ 77 (349)
T 1jmx_B 10 GHEYMIVTNYPN--NLHVVDVASDTVYKSCVMPDKF--GPGTAMMAPDNRTAYVLN--------NHYGDIYGIDLDTCKN 77 (349)
T ss_dssp TCEEEEEEETTT--EEEEEETTTTEEEEEEECSSCC--SSCEEEECTTSSEEEEEE--------TTTTEEEEEETTTTEE
T ss_pred CCEEEEEeCCCC--eEEEEECCCCcEEEEEecCCCC--CCceeEECCCCCEEEEEe--------CCCCcEEEEeCCCCcE
Confidence 455666555544 77788777 4444333333211 234566778888666663 3456799999999876
No 149
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=61.44 E-value=83 Score=27.49 Aligned_cols=141 Identities=14% Similarity=0.069 Sum_probs=75.1
Q ss_pred eEEEEEEcCCCcEEEcccCCCcceecCCCcEEE--CCeeEEEEeeCCCCCCcCEEEEEECCCCeeeee-cCCCCCCCCCc
Q 016891 175 TEIAVYSLRTNSWRRIRVDFPYYILHGWDGTFA--DGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEV-PLPHLENRNDV 251 (381)
Q Consensus 175 ~~~~vyss~t~~W~~~~~~~p~~~~~~~~~v~~--nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~ 251 (381)
..+.+++..++.|.... .........-..+.+ +|.+-..+..+. .|..+|+.+..+..+ .+.... .
T Consensus 38 ~~i~iw~~~~~~~~~~~-~~~~~h~~~v~~~~~sp~g~~l~s~s~D~------~v~iw~~~~~~~~~~~~~~~h~----~ 106 (345)
T 3fm0_A 38 RRIRIWGTEGDSWICKS-VLSEGHQRTVRKVAWSPCGNYLASASFDA------TTCIWKKNQDDFECVTTLEGHE----N 106 (345)
T ss_dssp SCEEEEEEETTEEEEEE-EECSSCSSCEEEEEECTTSSEEEEEETTS------CEEEEEECCC-EEEEEEECCCS----S
T ss_pred CeEEEEEcCCCcceeee-eeccccCCcEEEEEECCCCCEEEEEECCC------cEEEEEccCCCeEEEEEccCCC----C
Confidence 45778888888775432 111000000022222 454333333332 577888877765443 222111 1
Q ss_pred eeEEEEEE-CCeEEEEEecCCCceEEEEEEC--CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEE
Q 016891 252 LVMFVGNF-SGCLYFSCLCNYPQPVDIWVLM--GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWEL 328 (381)
Q Consensus 252 ~~~~L~~~-~G~L~~~~~~~~~~~~~iW~l~--~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l 328 (381)
.-..+.-. +|.+.+.+..++ .+.||.++ ..+..+..+.. ......-+.+.+++..|+.. ..+..+
T Consensus 107 ~v~~v~~sp~~~~l~s~s~D~--~v~iwd~~~~~~~~~~~~~~~-h~~~v~~~~~~p~~~~l~s~---------s~d~~i 174 (345)
T 3fm0_A 107 EVKSVAWAPSGNLLATCSRDK--SVWVWEVDEEDEYECVSVLNS-HTQDVKHVVWHPSQELLASA---------SYDDTV 174 (345)
T ss_dssp CEEEEEECTTSSEEEEEETTS--CEEEEEECTTSCEEEEEEECC-CCSCEEEEEECSSSSCEEEE---------ETTSCE
T ss_pred CceEEEEeCCCCEEEEEECCC--eEEEEECCCCCCeEEEEEecC-cCCCeEEEEECCCCCEEEEE---------eCCCcE
Confidence 12233333 577766666665 79999998 45555555541 11235566777788844444 345568
Q ss_pred EEEeCCCCce
Q 016891 329 FWYDLQNQGA 338 (381)
Q Consensus 329 ~~yd~~t~~~ 338 (381)
.+||.+++++
T Consensus 175 ~~w~~~~~~~ 184 (345)
T 3fm0_A 175 KLYREEEDDW 184 (345)
T ss_dssp EEEEEETTEE
T ss_pred EEEEecCCCE
Confidence 8999888776
No 150
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=60.21 E-value=82 Score=26.99 Aligned_cols=199 Identities=10% Similarity=0.033 Sum_probs=94.2
Q ss_pred EEEEeeCCCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCCcEEEc
Q 016891 111 LIAFKNDENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTNSWRRI 190 (381)
Q Consensus 111 Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W~~~ 190 (381)
|+........++.++| +++...+.... ....++.+|+. +. ++.. .. ....+.+|+.. ++.+.+
T Consensus 59 l~~~d~~~~~i~~~~~-~g~~~~~~~~~------~~~~gl~~d~d-G~--l~v~-~~-----~~~~v~~~~~~-g~~~~~ 121 (305)
T 3dr2_A 59 LVWSDLVGRRVLGWRE-DGTVDVLLDAT------AFTNGNAVDAQ-QR--LVHC-EH-----GRRAITRSDAD-GQAHLL 121 (305)
T ss_dssp EEEEETTTTEEEEEET-TSCEEEEEESC------SCEEEEEECTT-SC--EEEE-ET-----TTTEEEEECTT-SCEEEE
T ss_pred EEEEECCCCEEEEEeC-CCCEEEEeCCC------CccceeeECCC-CC--EEEE-EC-----CCCEEEEECCC-CCEEEE
Confidence 4444435567888888 56554443221 11335555653 22 2222 10 11356666664 555554
Q ss_pred ccCCCcceecCC-CcEEE--CCeeEEEEe---eCC--------CCCCcCEEEEEECCCCeeeeecCCCCCCCCCceeEEE
Q 016891 191 RVDFPYYILHGW-DGTFA--DGHVHWLVT---NNP--------EDYIENLIIAFNLKSEEFHEVPLPHLENRNDVLVMFV 256 (381)
Q Consensus 191 ~~~~p~~~~~~~-~~v~~--nG~lYwl~~---~~~--------~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~L 256 (381)
. .......... +.+.+ +|.+|+... ... .......|..+|+.+.+++.+. .... .. .+
T Consensus 122 ~-~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~-----p~-gl 193 (305)
T 3dr2_A 122 V-GRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDH-----PN-GL 193 (305)
T ss_dssp E-CEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESS-----EE-EE
T ss_pred E-eccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCC-----Cc-ce
Confidence 3 1111111111 33333 688777421 000 0001237999999877776553 1111 12 23
Q ss_pred EEE-CCe-EEEEEecCC---CceEEEEEEC-CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEE
Q 016891 257 GNF-SGC-LYFSCLCNY---PQPVDIWVLM-GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFW 330 (381)
Q Consensus 257 ~~~-~G~-L~~~~~~~~---~~~~~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~ 330 (381)
+.. +|+ |+++..... ...+.+|.++ ........+.........-+.+..+|. |++. . ...|..
T Consensus 194 ~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~-lwv~---------~-~~gv~~ 262 (305)
T 3dr2_A 194 AFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGW-LWSS---------S-GTGVCV 262 (305)
T ss_dssp EECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSC-EEEC---------C-SSEEEE
T ss_pred EEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCC-EEEe---------c-CCcEEE
Confidence 333 565 666655320 1245555444 332211111111111122355666787 7777 3 456999
Q ss_pred EeCCCCceeeeeEEEec
Q 016891 331 YDLQNQGAAADQVTIHG 347 (381)
Q Consensus 331 yd~~t~~~~~~~v~~~~ 347 (381)
||++++.+ ..+....
T Consensus 263 ~~~~g~~~--~~~~~~~ 277 (305)
T 3dr2_A 263 FDSDGQLL--GHIPTPG 277 (305)
T ss_dssp ECTTSCEE--EEEECSS
T ss_pred ECCCCCEE--EEEECCC
Confidence 99998888 8876544
No 151
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=59.79 E-value=95 Score=27.62 Aligned_cols=94 Identities=19% Similarity=0.193 Sum_probs=51.8
Q ss_pred EEEEEECCCCe--eeeecCCCCCCCCCceeEEEEEECCeEEEEEecCCCceEEEEEEC--CceeEEEEec-C----CCCC
Q 016891 226 LIIAFNLKSEE--FHEVPLPHLENRNDVLVMFVGNFSGCLYFSCLCNYPQPVDIWVLM--GCWTKTFSFP-R----SVGD 296 (381)
Q Consensus 226 ~i~~fD~~~e~--~~~i~~P~~~~~~~~~~~~L~~~~G~L~~~~~~~~~~~~~iW~l~--~~W~~~~~i~-~----~~~~ 296 (381)
.|..+|+.+.+ ...+...... ....+...+|.+.+....++ .+.||.+. ..-.....+. + ....
T Consensus 314 ~i~vwd~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~l~s~~~d~--~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (420)
T 3vl1_A 314 MLAQWDLRSPECPVGEFLINEGT-----PINNVYFAAGALFVSSGFDT--SIKLDIISDPESERPAIEFETPTFLVSNDD 386 (420)
T ss_dssp EEEEEETTCTTSCSEEEEESTTS-----CEEEEEEETTEEEEEETTTE--EEEEEEECCTTCCSCEECTTSCEEECCSSC
T ss_pred eEEEEEcCCCcCchhhhhccCCC-----CceEEEeCCCCEEEEecCCc--cEEEEeccCCCCCccceeccCccEEccCCc
Confidence 79999998753 2223221111 12233445787666555444 89999988 2211111111 0 0113
Q ss_pred eeEEEEEEeCCC---EEEEEecccCCccccCCcEEEEEeCCC
Q 016891 297 YVKALAYSKSGG---KVLVDKFEYGEDEDINRWELFWYDLQN 335 (381)
Q Consensus 297 ~~~~~~~~~~g~---~i~l~~~~~~~~~~~~~~~l~~yd~~t 335 (381)
...-+++.+++. .|+.. .....+..|+++.
T Consensus 387 ~v~~~~~s~~~~~~g~l~a~---------g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 387 AVSQFCYVSDDESNGEVLEV---------GKNNFCALYNLSN 419 (420)
T ss_dssp CCCEEEEECCSSSSCEEEEE---------ETTTEEEEEESCC
T ss_pred ceEEEEEccCCCCcceEEEE---------cCCceEEEEeccC
Confidence 345566677766 67777 4566788998875
No 152
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=59.60 E-value=86 Score=27.02 Aligned_cols=190 Identities=10% Similarity=0.047 Sum_probs=88.3
Q ss_pred EEEEeeCCCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCCcEEEc
Q 016891 111 LIAFKNDENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTNSWRRI 190 (381)
Q Consensus 111 Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W~~~ 190 (381)
+|+....+..+.|||..+++...+.... .....+.+.+..+. +.+.... . ...+.+|+.+++.-...
T Consensus 100 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~------~~v~~~~~~~~~~~-~~l~~~~--~----dg~i~vwd~~~~~~~~~ 166 (368)
T 3mmy_A 100 KVFTASCDKTAKMWDLSSNQAIQIAQHD------APVKTIHWIKAPNY-SCVMTGS--W----DKTLKFWDTRSSNPMMV 166 (368)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEECS------SCEEEEEEEECSSC-EEEEEEE--T----TSEEEEECSSCSSCSEE
T ss_pred EEEEEcCCCcEEEEEcCCCCceeecccc------CceEEEEEEeCCCC-CEEEEcc--C----CCcEEEEECCCCcEEEE
Confidence 4444445667899999888877643221 12233444222222 2222221 1 14677888776531111
Q ss_pred ccCCCcceecCCCcEEECCeeEEEEeeCCCCCCcCEEEEEECCCCee--eeecCCCCCCCCCceeEEEEEEC---CeEEE
Q 016891 191 RVDFPYYILHGWDGTFADGHVHWLVTNNPEDYIENLIIAFNLKSEEF--HEVPLPHLENRNDVLVMFVGNFS---GCLYF 265 (381)
Q Consensus 191 ~~~~p~~~~~~~~~v~~nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~--~~i~~P~~~~~~~~~~~~L~~~~---G~L~~ 265 (381)
- ..+... ..+...+.....+..+. .+..+|+.+..- ..+..+.... .....+.... ....+
T Consensus 167 ~-~~~~~~----~~~~~~~~~~~~~~~~~------~i~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 232 (368)
T 3mmy_A 167 L-QLPERC----YCADVIYPMAVVATAER------GLIVYQLENQPSEFRRIESPLKHQ---HRCVAIFKDKQNKPTGFA 232 (368)
T ss_dssp E-ECSSCE----EEEEEETTEEEEEEGGG------CEEEEECSSSCEEEEECCCSCSSC---EEEEEEEECTTSCEEEEE
T ss_pred E-ecCCCc----eEEEecCCeeEEEeCCC------cEEEEEeccccchhhhccccccCC---CceEEEcccCCCCCCeEE
Confidence 1 011100 11222222333333332 688888876543 3333332221 1122222111 12233
Q ss_pred EEecCCCceEEEEEEC-C-ceeEEEEec-C-C-------CC--CeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEe
Q 016891 266 SCLCNYPQPVDIWVLM-G-CWTKTFSFP-R-S-------VG--DYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYD 332 (381)
Q Consensus 266 ~~~~~~~~~~~iW~l~-~-~W~~~~~i~-~-~-------~~--~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd 332 (381)
+...++ .+.||.++ . .-.....+. . . .+ ....-+++.+++..|+.. ..+..+.+||
T Consensus 233 ~~~~dg--~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~---------~~dg~i~iwd 301 (368)
T 3mmy_A 233 LGSIEG--RVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATV---------GSDGRFSFWD 301 (368)
T ss_dssp EEETTS--EEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEE---------ETTSCEEEEE
T ss_pred EecCCC--cEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEE---------ccCCeEEEEE
Confidence 333334 89999988 2 111222222 0 0 00 135556777788845444 3556799999
Q ss_pred CCCCce
Q 016891 333 LQNQGA 338 (381)
Q Consensus 333 ~~t~~~ 338 (381)
+++++.
T Consensus 302 ~~~~~~ 307 (368)
T 3mmy_A 302 KDARTK 307 (368)
T ss_dssp TTTTEE
T ss_pred CCCCcE
Confidence 998776
No 153
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=59.54 E-value=1.3e+02 Score=29.21 Aligned_cols=195 Identities=10% Similarity=0.057 Sum_probs=98.7
Q ss_pred CcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCC-cEEEcccCCCcc
Q 016891 119 NGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTN-SWRRIRVDFPYY 197 (381)
Q Consensus 119 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~-~W~~~~~~~p~~ 197 (381)
..++++|..+++...+..... . ......+.+.+.. .+ ++.... ........+.+++..++ ..+.+.......
T Consensus 235 ~~l~~~d~~~~~~~~~~~~~~-~--~~~~~~~~~spdg-~~-l~~~~~--~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~ 307 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQTGEP-K--EKFLTNLSWSPDE-NI-LYVAEV--NRAQNECKVNAYDAETGRFVRTLFVETDKH 307 (706)
T ss_dssp EEEEEEETTTTEEEECCCCSC-T--TCEEEEEEECTTS-SE-EEEEEE--CTTSCEEEEEEEETTTCCEEEEEEEEECSS
T ss_pred eEEEEEECCCCceEeeccCCC-C--ceeEeeEEEECCC-CE-EEEEEe--CCCCCeeEEEEEECCCCceeeEEEEccCCC
Confidence 468999999998777653311 1 1123344444433 22 222211 11112267888898888 776654110000
Q ss_pred eecCCCcEEE----CCeeEEEEeeCCCCCCcCEEEEEECCCCeeeeecCCCCCCCCCceeEE-EEEE-CC-eEEEEEecC
Q 016891 198 ILHGWDGTFA----DGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEVPLPHLENRNDVLVMF-VGNF-SG-CLYFSCLCN 270 (381)
Q Consensus 198 ~~~~~~~v~~----nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~-L~~~-~G-~L~~~~~~~ 270 (381)
.......+.+ +|.+.+.+..+. ...|..+|..+.....+..... .... +... +| .|++....+
T Consensus 308 ~~~~~~~~~~sp~~dg~~l~~~~~~g----~~~l~~~~~~~~~~~~l~~~~~------~v~~~~~~spdg~~l~~~~~~~ 377 (706)
T 2z3z_A 308 YVEPLHPLTFLPGSNNQFIWQSRRDG----WNHLYLYDTTGRLIRQVTKGEW------EVTNFAGFDPKGTRLYFESTEA 377 (706)
T ss_dssp CCCCCSCCEECTTCSSEEEEEECTTS----SCEEEEEETTSCEEEECCCSSS------CEEEEEEECTTSSEEEEEESSS
T ss_pred eECccCCceeecCCCCEEEEEEccCC----ccEEEEEECCCCEEEecCCCCe------EEEeeeEEcCCCCEEEEEecCC
Confidence 0000022222 788766654332 2368888877766665532111 1112 3333 45 455555554
Q ss_pred CCceEEEEEEC-CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCce
Q 016891 271 YPQPVDIWVLM-GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGA 338 (381)
Q Consensus 271 ~~~~~~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~ 338 (381)
......||.++ .. .+...+.. ......+.+.++|..|++.. ........++.+|+++++.
T Consensus 378 ~~~~~~l~~~d~~~-~~~~~l~~--~~~~~~~~~spdg~~l~~~~-----~~~~~p~~i~l~d~~~~~~ 438 (706)
T 2z3z_A 378 SPLERHFYCIDIKG-GKTKDLTP--ESGMHRTQLSPDGSAIIDIF-----QSPTVPRKVTVTNIGKGSH 438 (706)
T ss_dssp CTTCBEEEEEETTC-CCCEESCC--SSSEEEEEECTTSSEEEEEE-----ECSSCSCEEEEEESSSCEE
T ss_pred CCceEEEEEEEcCC-CCceeccC--CCceEEEEECCCCCEEEEEe-----cCCCCCcEEEEEECCCCeE
Confidence 43346788776 21 11223332 12245567778888666652 1112235699999988874
No 154
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=59.10 E-value=1.6e+02 Score=29.85 Aligned_cols=117 Identities=9% Similarity=0.064 Sum_probs=64.3
Q ss_pred CcEEE---CCeeEEEEeeCCCCCCcCEEEEEECCCCeeeeecCCCCCCCCCceeEEEEE--ECCeEEEEEecCCCceEEE
Q 016891 203 DGTFA---DGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEVPLPHLENRNDVLVMFVGN--FSGCLYFSCLCNYPQPVDI 277 (381)
Q Consensus 203 ~~v~~---nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~--~~G~L~~~~~~~~~~~~~i 277 (381)
.++.+ +|.|||...... .|.++|+.....+.+-. .... ....|++ .+|.||+....... +|.+
T Consensus 474 ~GLAvD~~~~~LY~tD~~~~------~I~v~~ldG~~~~~l~~-~~l~----~P~gIaVDp~~g~LYwtD~g~~~-~I~~ 541 (791)
T 3m0c_C 474 DGLAVDWIHSNIYWTDSVLG------TVSVADTKGVKRKTLFR-ENGS----KPRAIVVDPVHGFMYWTDWGTPA-KIKK 541 (791)
T ss_dssp CEEEEETTTTEEEEEETTTT------EEEEEETTSSSEEEEEE-CTTC----CEEEEEEETTTTEEEEEECSSSC-EEEE
T ss_pred ceeeeeecCCcEEEEecCCC------eEEEEeCCCCeEEEEEe-CCCC----CcceEEEecCCCCEEEecCCCCC-eEEE
Confidence 55655 469999876543 89999998765444411 1111 1223443 36889888754322 4444
Q ss_pred EEECCceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCceeeeeE
Q 016891 278 WVLMGCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGAAADQV 343 (381)
Q Consensus 278 W~l~~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~~~~~v 343 (381)
-.|+..-.++ .+...+ ....-+++...++.||+.- ....+|..+|++.... +.+
T Consensus 542 ~~~dG~~~~~-lv~~~l-~~P~GLavD~~~~~LYwaD--------~~~~~I~~~d~dG~~~--~~v 595 (791)
T 3m0c_C 542 GGLNGVDIYS-LVTENI-QWPNGITLDLLSGRLYWVD--------SKLHSISSIDVNGGNR--KTI 595 (791)
T ss_dssp EETTSCCEEE-EECSSC-SCEEEEEEETTTTEEEEEE--------TTTTEEEEEETTSCSC--EEE
T ss_pred EecCCCceEE-EEeCCC-CCceEEEEecCCCeEEEEe--------CCCCcEEEEecCCCce--EEE
Confidence 4444332221 122111 1234455554566688882 3345799999988777 555
No 155
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=59.06 E-value=87 Score=26.93 Aligned_cols=105 Identities=11% Similarity=0.120 Sum_probs=58.2
Q ss_pred CCeeEEEEeeCCCCCCcCEEEEEECCCCeeeeecCCCCCCCCCceeEEEEEE-CCeEEEEEecCCCceEEEEEEC---Cc
Q 016891 208 DGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEVPLPHLENRNDVLVMFVGNF-SGCLYFSCLCNYPQPVDIWVLM---GC 283 (381)
Q Consensus 208 nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~-~G~L~~~~~~~~~~~~~iW~l~---~~ 283 (381)
+|.|||...... .|..+|+.++.-..+..+. .-..++.. +|+|+++..... ...|+.+. .+
T Consensus 42 ~g~lyv~d~~~~------~I~~~d~~g~~~~~~~~~~-------~p~gia~~~dG~l~vad~~~~--~~~v~~~d~~~g~ 106 (306)
T 2p4o_A 42 DGTIFVTNHEVG------EIVSITPDGNQQIHATVEG-------KVSGLAFTSNGDLVATGWNAD--SIPVVSLVKSDGT 106 (306)
T ss_dssp TSCEEEEETTTT------EEEEECTTCCEEEEEECSS-------EEEEEEECTTSCEEEEEECTT--SCEEEEEECTTSC
T ss_pred CCCEEEEeCCCC------eEEEECCCCceEEEEeCCC-------CceeEEEcCCCcEEEEeccCC--cceEEEEcCCCCe
Confidence 689999875432 7999999876444444432 12234433 688888775433 23455553 45
Q ss_pred eeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCce
Q 016891 284 WTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGA 338 (381)
Q Consensus 284 W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~ 338 (381)
...+..++. . ....-++.+. +..+++.. .....++.+|+.+++.
T Consensus 107 ~~~~~~~~~-~-~~~~g~~~~~-~~~~~v~d--------~~~g~i~~~d~~~~~~ 150 (306)
T 2p4o_A 107 VETLLTLPD-A-IFLNGITPLS-DTQYLTAD--------SYRGAIWLIDVVQPSG 150 (306)
T ss_dssp EEEEEECTT-C-SCEEEEEESS-SSEEEEEE--------TTTTEEEEEETTTTEE
T ss_pred EEEEEeCCC-c-cccCcccccC-CCcEEEEE--------CCCCeEEEEeCCCCcE
Confidence 554444431 1 1122233343 34366661 2345799999987643
No 156
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=58.74 E-value=1.1e+02 Score=27.87 Aligned_cols=213 Identities=10% Similarity=0.013 Sum_probs=101.4
Q ss_pred cCcEEEEee-CCCcEEEEccCCc----ceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEc
Q 016891 108 CNGLIAFKN-DENGIALWNPSTE----EHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSL 182 (381)
Q Consensus 108 ~~GLl~~~~-~~~~~~V~NP~T~----~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss 182 (381)
.+|.|...+ ....++..++... ....+-... .....++.+|...+ ++++.- .....+++++.
T Consensus 122 ~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~-----~~~p~glavD~~~~--~lY~~d------~~~~~I~~~~~ 188 (400)
T 3p5b_L 122 ASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD-----IQAPDGLAVDWIHS--NIYWTD------SVLGTVSVADT 188 (400)
T ss_dssp TTTEEEEEETTTTEEEEEEC------CCCEEEECSS-----CSCEEEEEEETTTT--EEEEEE------TTTTEEEEECT
T ss_pred ccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCC-----CCCcccEEEEecCC--ceEEEE------CCCCeEEEEeC
Confidence 456665555 3455666666542 111211111 11234566676544 232221 11245667777
Q ss_pred CCCcEEEcccCCCcceecCCCcEEE---CCeeEEEEeeCCCCCCcCEEEEEECCCCeeeeecCCCCCCCCCceeEEEEE-
Q 016891 183 RTNSWRRIRVDFPYYILHGWDGTFA---DGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEVPLPHLENRNDVLVMFVGN- 258 (381)
Q Consensus 183 ~t~~W~~~~~~~p~~~~~~~~~v~~---nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~- 258 (381)
.+..-+.+. ... ... ..++.+ +|.|||...... ..|..+|+....-+.+-. .... ..-.|+.
T Consensus 189 ~g~~~~~l~-~~~--~~~-P~~iavdp~~g~ly~td~~~~-----~~I~~~~~dG~~~~~~~~-~~l~----~P~glavd 254 (400)
T 3p5b_L 189 KGVKRKTLF-REN--GSK-PRAIVVDPVHGFMYWTDWGTP-----AKIKKGGLNGVDIYSLVT-ENIQ----WPNGITLD 254 (400)
T ss_dssp TTCSEEEEE-ECS--SCC-EEEEEEETTTTEEEEEECSSS-----CCEEEEETTSCSCEEEEC-SSCS----CEEEEEEE
T ss_pred CCCceEEEE-eCC--CCC-cceEEEecccCeEEEEeCCCC-----CEEEEEeCCCCccEEEEE-CCCC----ceEEEEEE
Confidence 665544433 111 000 044554 689999875321 269999988654333311 1111 1223443
Q ss_pred -ECCeEEEEEecCCCceEEEEEECCceeE-EEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCC
Q 016891 259 -FSGCLYFSCLCNYPQPVDIWVLMGCWTK-TFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQ 336 (381)
Q Consensus 259 -~~G~L~~~~~~~~~~~~~iW~l~~~W~~-~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~ 336 (381)
.+|+||++..... .|....++..-.+ +...+ +....|.++...++.||+.. .....|..+|..++
T Consensus 255 ~~~~~lY~aD~~~~--~I~~~d~dG~~~~~~~~~~---~~l~~P~gl~v~~~~lywtd--------~~~~~V~~~~~~~G 321 (400)
T 3p5b_L 255 LLSGRLYWVDSKLH--SISSIDVNGGNRKTILEDE---KRLAHPFSLAVFEDKVFWTD--------IINEAIFSANRLTG 321 (400)
T ss_dssp TTTTEEEEEETTTT--EEEEEETTSCCCEEEEECS---STTSSEEEEEEETTEEEEEE--------SSSCSEEEEESSSC
T ss_pred eCCCEEEEEECCCC--EEEEEeCCCCccEEEEeCC---CCCCCCEEEEEeCCEEEEec--------CCCCeEEEEEcCCC
Confidence 3688999876543 4333333322111 11111 12235666655566688883 34456999997666
Q ss_pred ceeeeeEEEecCCCCceeEEEEeecee
Q 016891 337 GAAADQVTIHGVPQGCRDTIVCVDSLV 363 (381)
Q Consensus 337 ~~~~~~v~~~~~~~~~~~~~~y~~sl~ 363 (381)
+.- +.|. .+.... ..+.+|.+...
T Consensus 322 ~~~-~~i~-~~~~~p-~~i~v~~~~~q 345 (400)
T 3p5b_L 322 SDV-NLLA-ENLLSP-EDMVLFHNLTQ 345 (400)
T ss_dssp CCC-EEEE-CSCSCE-EEEEEESGGGS
T ss_pred Cce-EEEe-cCCCCC-ceEEEEeeccC
Confidence 540 3442 222222 45666665543
No 157
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=58.54 E-value=1.4e+02 Score=29.16 Aligned_cols=192 Identities=12% Similarity=0.066 Sum_probs=98.9
Q ss_pred cccCcEEEEee-CCCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCC
Q 016891 106 DSCNGLIAFKN-DENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRT 184 (381)
Q Consensus 106 ~s~~GLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t 184 (381)
+..+|.|...+ ....+..+++-......+-..... ...++.+|...+ ++++.- .....++++++.+
T Consensus 45 d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~-----~P~GlAvD~~~~--~LY~tD------~~~~~I~v~~~dG 111 (628)
T 4a0p_A 45 DVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLD-----YPEGMAVDWLGK--NLYWAD------TGTNRIEVSKLDG 111 (628)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCS-----CCCEEEEETTTT--EEEEEE------TTTTEEEEEETTS
T ss_pred ECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCC-----CcceEEEEeCCC--EEEEEE------CCCCEEEEEecCC
Confidence 34567777666 456777888766544443322211 122566676555 333321 1225677777765
Q ss_pred CcEEEcccCCCcceecCCCcEEE---CCeeEEEEeeCCCCCCcCEEEEEECCCCeeeeecCCCCCCCCCceeEEEEEECC
Q 016891 185 NSWRRIRVDFPYYILHGWDGTFA---DGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEVPLPHLENRNDVLVMFVGNFSG 261 (381)
Q Consensus 185 ~~W~~~~~~~p~~~~~~~~~v~~---nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~~G 261 (381)
..=+.+. ... .... .++.+ +|.|||...... ..|..+++.....+.+- . .... ...+.+-..++
T Consensus 112 ~~~~~l~-~~~--l~~P-~~iavdp~~G~lY~tD~g~~-----~~I~r~~~dG~~~~~l~-~-~~~~--P~GlalD~~~~ 178 (628)
T 4a0p_A 112 QHRQVLV-WKD--LDSP-RALALDPAEGFMYWTEWGGK-----PKIDRAAMDGSERTTLV-P-NVGR--ANGLTIDYAKR 178 (628)
T ss_dssp TTCEEEE-CSS--CCCE-EEEEEETTTTEEEEEECSSS-----CEEEEEETTSCSCEEEE-C-SCSS--EEEEEEETTTT
T ss_pred CcEEEEE-eCC--CCCc-ccEEEccCCCeEEEeCCCCC-----CEEEEEeCCCCceEEEE-C-CCCC--cceEEEccccC
Confidence 4322222 101 1111 45554 599999874321 27999999866554431 1 1110 11222222368
Q ss_pred eEEEEEecCCCceEEEEEECCceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCce
Q 016891 262 CLYFSCLCNYPQPVDIWVLMGCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGA 338 (381)
Q Consensus 262 ~L~~~~~~~~~~~~~iW~l~~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~ 338 (381)
+||++..... .+....++..-.++ +.. ....|.++.-+++.||+.. .....|...|..+++-
T Consensus 179 ~LY~aD~~~~--~I~~~d~dG~~~~v--~~~---~l~~P~glav~~~~ly~tD--------~~~~~I~~~dk~tg~~ 240 (628)
T 4a0p_A 179 RLYWTDLDTN--LIESSNMLGLNREV--IAD---DLPHPFGLTQYQDYIYWTD--------WSRRSIERANKTSGQN 240 (628)
T ss_dssp EEEEEETTTT--EEEEEETTSCSCEE--EEE---CCSCEEEEEEETTEEEEEE--------TTTTEEEEEETTTCCS
T ss_pred EEEEEECCCC--EEEEEcCCCCceEE--eec---cCCCceEEEEECCEEEEec--------CCCCEEEEEECCCCCc
Confidence 8999887544 44433333221221 221 1224555555456688883 3456799999887765
No 158
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=58.37 E-value=91 Score=26.94 Aligned_cols=127 Identities=12% Similarity=0.060 Sum_probs=64.5
Q ss_pred CcEEE--CCeeEEEEeeCCCCCCcCEEEEEECCCCeeeeecCCCCCCC--------------CCceeEEEEEE--CCeEE
Q 016891 203 DGTFA--DGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEVPLPHLENR--------------NDVLVMFVGNF--SGCLY 264 (381)
Q Consensus 203 ~~v~~--nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~--------------~~~~~~~L~~~--~G~L~ 264 (381)
.++.+ +|.++|...... .|..||..+.+++.+..+..... .......+... +|.|+
T Consensus 22 ~~i~~d~~g~~l~v~~~~~------~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~ 95 (322)
T 2fp8_A 22 NSFTFDSTNKGFYTSVQDG------RVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLY 95 (322)
T ss_dssp CCEECCTTCSSEEEECTTS------EEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEE
T ss_pred eEEEEcCCCCEEEEEcCCC------eEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEE
Confidence 44554 578888765442 79999998877766533221100 00012234444 58888
Q ss_pred EEEecCCCceEEEEEEC---CceeEEEEecCC-CCCeeEEEEEEe-CCCEEEEEecc--cCC-------ccccCCcEEEE
Q 016891 265 FSCLCNYPQPVDIWVLM---GCWTKTFSFPRS-VGDYVKALAYSK-SGGKVLVDKFE--YGE-------DEDINRWELFW 330 (381)
Q Consensus 265 ~~~~~~~~~~~~iW~l~---~~W~~~~~i~~~-~~~~~~~~~~~~-~g~~i~l~~~~--~~~-------~~~~~~~~l~~ 330 (381)
++.... . |+.++ .....+...... ......-+.+.+ +|. |++.... ++- .+......++.
T Consensus 96 v~d~~~---~--i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~ 169 (322)
T 2fp8_A 96 IVDCYY---H--LSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGI-VYFTDVSTLYDDRGVQQIMDTSDKTGRLIK 169 (322)
T ss_dssp EEETTT---E--EEEECTTCEECEEEESEETTEECSCEEEEEECTTTCC-EEEEESCSSCCTTCHHHHHHHTCCCEEEEE
T ss_pred EEECCC---C--EEEEeCCCCEEEEecccCCCCcccccceEEEecCCCE-EEEECCcccccccccceehcccCCCceEEE
Confidence 886542 2 44554 222222111110 002234466666 776 8887311 000 00001256999
Q ss_pred EeCCCCceeeeeE
Q 016891 331 YDLQNQGAAADQV 343 (381)
Q Consensus 331 yd~~t~~~~~~~v 343 (381)
||+++++. +.+
T Consensus 170 ~d~~~~~~--~~~ 180 (322)
T 2fp8_A 170 YDPSTKET--TLL 180 (322)
T ss_dssp EETTTTEE--EEE
T ss_pred EeCCCCEE--EEe
Confidence 99999887 654
No 159
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=58.25 E-value=1e+02 Score=27.43 Aligned_cols=187 Identities=8% Similarity=0.030 Sum_probs=96.9
Q ss_pred cEEEEeeCCCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCCcE-E
Q 016891 110 GLIAFKNDENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTNSW-R 188 (381)
Q Consensus 110 GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W-~ 188 (381)
.+|+.......+.|||..+++....-... ......+.+.+.. .+ + +... . ...+.+|+.+++.= +
T Consensus 110 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~h-----~~~v~~~~~~~~~-~~-l-~s~s--~----d~~i~iwd~~~~~~~~ 175 (420)
T 3vl1_A 110 RRFILGTTEGDIKVLDSNFNLQREIDQAH-----VSEITKLKFFPSG-EA-L-ISSS--Q----DMQLKIWSVKDGSNPR 175 (420)
T ss_dssp CEEEEEETTSCEEEECTTSCEEEEETTSS-----SSCEEEEEECTTS-SE-E-EEEE--T----TSEEEEEETTTCCCCE
T ss_pred CEEEEEECCCCEEEEeCCCcceeeecccc-----cCccEEEEECCCC-CE-E-EEEe--C----CCeEEEEeCCCCcCce
Confidence 34445556678999999988877653221 1234455666543 22 2 2221 1 15688888876531 1
Q ss_pred EcccCCCcceecCCCcEEE--CCeeEEEEeeCCCCCCcCEEEEEECCCCeeee-ecCCCCCCCCCceeEEEEE-------
Q 016891 189 RIRVDFPYYILHGWDGTFA--DGHVHWLVTNNPEDYIENLIIAFNLKSEEFHE-VPLPHLENRNDVLVMFVGN------- 258 (381)
Q Consensus 189 ~~~~~~p~~~~~~~~~v~~--nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~-i~~P~~~~~~~~~~~~L~~------- 258 (381)
.+. ...... .++.+ +|.....+..+. .|..+|+.+.+... +..+..... ....+..
T Consensus 176 ~~~-~h~~~v----~~~~~~~~~~~l~s~~~d~------~v~iwd~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~ 241 (420)
T 3vl1_A 176 TLI-GHRATV----TDIAIIDRGRNVLSASLDG------TIRLWECGTGTTIHTFNRKENPHD---GVNSIALFVGTDRQ 241 (420)
T ss_dssp EEE-CCSSCE----EEEEEETTTTEEEEEETTS------CEEEEETTTTEEEEEECBTTBTTC---CEEEEEEEECCCSS
T ss_pred EEc-CCCCcE----EEEEEcCCCCEEEEEcCCC------cEEEeECCCCceeEEeecCCCCCC---CccEEEEecCCcce
Confidence 111 111001 22222 454444333332 68899998765433 332221110 1111111
Q ss_pred ---------------ECCeEEEEEecCCCceEEEEEEC-CceeEEEEecCCCCCeeEEEEEEeCCC-EEEEEecccCCcc
Q 016891 259 ---------------FSGCLYFSCLCNYPQPVDIWVLM-GCWTKTFSFPRSVGDYVKALAYSKSGG-KVLVDKFEYGEDE 321 (381)
Q Consensus 259 ---------------~~G~L~~~~~~~~~~~~~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~-~i~l~~~~~~~~~ 321 (381)
-+|++.++...++ .+.||.+. .. ....+.........-+.+.+++. .|+..
T Consensus 242 ~~~~~~~~v~~~~~s~~~~~l~~~~~dg--~i~i~d~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~~g-------- 309 (420)
T 3vl1_A 242 LHEISTSKKNNLEFGTYGKYVIAGHVSG--VITVHNVFSKE--QTIQLPSKFTCSCNSLTVDGNNANYIYAG-------- 309 (420)
T ss_dssp CGGGCCCCCCTTCSSCTTEEEEEEETTS--CEEEEETTTCC--EEEEECCTTSSCEEEEEECSSCTTEEEEE--------
T ss_pred eeecccCcccceEEcCCCCEEEEEcCCC--eEEEEECCCCc--eeEEcccccCCCceeEEEeCCCCCEEEEE--------
Confidence 2566666666555 79999887 32 22333321223456677777777 45554
Q ss_pred ccCCcEEEEEeCCCCc
Q 016891 322 DINRWELFWYDLQNQG 337 (381)
Q Consensus 322 ~~~~~~l~~yd~~t~~ 337 (381)
..+..+.+||+++.+
T Consensus 310 -~~dg~i~vwd~~~~~ 324 (420)
T 3vl1_A 310 -YENGMLAQWDLRSPE 324 (420)
T ss_dssp -ETTSEEEEEETTCTT
T ss_pred -eCCCeEEEEEcCCCc
Confidence 456689999999864
No 160
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=58.18 E-value=98 Score=27.23 Aligned_cols=67 Identities=16% Similarity=0.147 Sum_probs=38.8
Q ss_pred CCeEEEEEecCCCceEEEEEEC-CceeEEEEecCCC---CCeeEEEEEEeCCCEEEEEecccCCccccCC---cEEEEEe
Q 016891 260 SGCLYFSCLCNYPQPVDIWVLM-GCWTKTFSFPRSV---GDYVKALAYSKSGGKVLVDKFEYGEDEDINR---WELFWYD 332 (381)
Q Consensus 260 ~G~L~~~~~~~~~~~~~iW~l~-~~W~~~~~i~~~~---~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~---~~l~~yd 332 (381)
+| +.++...++ .+.+|.++ ..-.......... .....-+.+.+++..|+.. ... ..+.+||
T Consensus 197 ~~-~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~---------~~d~~~g~i~i~d 264 (397)
T 1sq9_A 197 RG-LIATGFNNG--TVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIA---------HDSNSFGCITLYE 264 (397)
T ss_dssp TS-EEEEECTTS--EEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEE---------EEETTEEEEEEEE
T ss_pred Cc-eEEEEeCCC--cEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEE---------ecCCCCceEEEEE
Confidence 45 444444334 89999988 4433333220001 2345667777788844444 344 5799999
Q ss_pred CCCCce
Q 016891 333 LQNQGA 338 (381)
Q Consensus 333 ~~t~~~ 338 (381)
+++++.
T Consensus 265 ~~~~~~ 270 (397)
T 1sq9_A 265 TEFGER 270 (397)
T ss_dssp TTTCCE
T ss_pred CCCCcc
Confidence 988776
No 161
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=58.11 E-value=58 Score=29.66 Aligned_cols=100 Identities=7% Similarity=-0.014 Sum_probs=53.8
Q ss_pred EEEEEECCCCeeee-ecCCCCCCCCCceeEEEEE--ECCeEEEEEecCCCceEEEEEEC-CceeEEEEecCCCCCeeEEE
Q 016891 226 LIIAFNLKSEEFHE-VPLPHLENRNDVLVMFVGN--FSGCLYFSCLCNYPQPVDIWVLM-GCWTKTFSFPRSVGDYVKAL 301 (381)
Q Consensus 226 ~i~~fD~~~e~~~~-i~~P~~~~~~~~~~~~L~~--~~G~L~~~~~~~~~~~~~iW~l~-~~W~~~~~i~~~~~~~~~~~ 301 (381)
.|..+|+.+..... +.+.... ..-..|.- .+|.+.+.+..++ .+.||-++ ..-.... -..........+
T Consensus 143 ~i~lWd~~~~~~~~~~~~~gH~----~~V~~l~f~p~~~~~l~s~s~D~--~v~iwd~~~~~~~~~~-~~~~~~~~~~~~ 215 (435)
T 4e54_B 143 DIMLWNFGIKDKPTFIKGIGAG----GSITGLKFNPLNTNQFYASSMEG--TTRLQDFKGNILRVFA-SSDTINIWFCSL 215 (435)
T ss_dssp CEEEECSSCCSCCEEECCCSSS----CCCCEEEECSSCTTEEEEECSSS--CEEEEETTSCEEEEEE-CCSSCSCCCCCE
T ss_pred EEEEEECCCCCceeEEEccCCC----CCEEEEEEeCCCCCEEEEEeCCC--EEEEeeccCCceeEEe-ccCCCCccEEEE
Confidence 57788887654322 2322111 11123333 3566666555555 79999988 3222111 111111223446
Q ss_pred EEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCceeeeeE
Q 016891 302 AYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGAAADQV 343 (381)
Q Consensus 302 ~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~~~~~v 343 (381)
.+.+++. +++.+ .....|.+||++++.+ ..+
T Consensus 216 ~~~~~~~-~l~~g--------~~dg~i~~wd~~~~~~--~~~ 246 (435)
T 4e54_B 216 DVSASSR-MVVTG--------DNVGNVILLNMDGKEL--WNL 246 (435)
T ss_dssp EEETTTT-EEEEE--------CSSSBEEEEESSSCBC--CCS
T ss_pred EECCCCC-EEEEE--------eCCCcEeeeccCccee--EEE
Confidence 6777888 54442 4556799999998877 555
No 162
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=57.76 E-value=1.1e+02 Score=27.75 Aligned_cols=194 Identities=9% Similarity=0.039 Sum_probs=94.8
Q ss_pred EcccCcEEEEeeCCCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCC
Q 016891 105 IDSCNGLIAFKNDENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRT 184 (381)
Q Consensus 105 ~~s~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t 184 (381)
+...+++|+....+..+.|||..+++...--.. +. .....+.+.+.. .++.. . . ...+.+++.++
T Consensus 128 ~~~~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~---h~--~~V~~l~~~~~~---~l~s~-s--~----dg~i~vwd~~~ 192 (464)
T 3v7d_B 128 LQFEDNYVITGADDKMIRVYDSINKKFLLQLSG---HD--GGVWALKYAHGG---ILVSG-S--T----DRTVRVWDIKK 192 (464)
T ss_dssp EEEETTEEEEEETTSCEEEEETTTTEEEEEECC---CS--SCEEEEEECSTT---EEEEE-E--T----TSCEEEEETTT
T ss_pred EEECCCEEEEEcCCCcEEEEECCCCcEEEEEeC---CC--cCEEEEEEcCCC---EEEEE-e--C----CCCEEEEECCC
Confidence 344456666555677899999888775542111 11 123344444332 22222 1 1 14678888877
Q ss_pred CcEEEcccCCCcceecCCCcEEE----CCeeEEEEeeCCCCCCcCEEEEEECCCCeeeee-c----------CCCC----
Q 016891 185 NSWRRIRVDFPYYILHGWDGTFA----DGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEV-P----------LPHL---- 245 (381)
Q Consensus 185 ~~W~~~~~~~p~~~~~~~~~v~~----nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i-~----------~P~~---- 245 (381)
+.-...-....... .++.+ +|..-..+..+. .|..+|+.+..-... . .|..
T Consensus 193 ~~~~~~~~~h~~~v----~~l~~~~~~~~~~l~s~s~d~------~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (464)
T 3v7d_B 193 GCCTHVFEGHNSTV----RCLDIVEYKNIKYIVTGSRDN------TLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYF 262 (464)
T ss_dssp TEEEEEECCCSSCE----EEEEEEESSSCEEEEEEETTS------CEEEEECCCCCCC------CCSSEEESCGGGCTTE
T ss_pred CcEEEEECCCCCcc----EEEEEecCCCCCEEEEEcCCC------cEEEeeCCCCcccccccccCCcceEeeccCCCeEE
Confidence 64322110111111 12221 233333333221 678888876542211 0 0000
Q ss_pred ---CCCCCceeEEEEEECCeEEEEEecCCCceEEEEEEC-CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCcc
Q 016891 246 ---ENRNDVLVMFVGNFSGCLYFSCLCNYPQPVDIWVLM-GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDE 321 (381)
Q Consensus 246 ---~~~~~~~~~~L~~~~G~L~~~~~~~~~~~~~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~ 321 (381)
...+ ...+.-...+|.+.++...++ .+.+|.+. .+ .+..+.. .......+++.+++..++..
T Consensus 263 ~~~~~~~-~~~v~~~~~~~~~l~~~~~d~--~i~vwd~~~~~--~~~~~~~-~~~~v~~~~~~~~~~~l~sg-------- 328 (464)
T 3v7d_B 263 VGVLRGH-MASVRTVSGHGNIVVSGSYDN--TLIVWDVAQMK--CLYILSG-HTDRIYSTIYDHERKRCISA-------- 328 (464)
T ss_dssp EEEECCC-SSCEEEEEEETTEEEEEETTS--CEEEEETTTTE--EEEEECC-CSSCEEEEEEETTTTEEEEE--------
T ss_pred EEEccCc-cceEEEEcCCCCEEEEEeCCC--eEEEEECCCCc--EEEEecC-CCCCEEEEEEcCCCCEEEEE--------
Confidence 0000 011122234566666666555 79999887 32 2333331 11345667778888844444
Q ss_pred ccCCcEEEEEeCCCCce
Q 016891 322 DINRWELFWYDLQNQGA 338 (381)
Q Consensus 322 ~~~~~~l~~yd~~t~~~ 338 (381)
..+..+.+||+++++.
T Consensus 329 -~~dg~i~vwd~~~~~~ 344 (464)
T 3v7d_B 329 -SMDTTIRIWDLENGEL 344 (464)
T ss_dssp -ETTSCEEEEETTTTEE
T ss_pred -eCCCcEEEEECCCCcE
Confidence 3556799999998876
No 163
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=57.17 E-value=1.4e+02 Score=28.73 Aligned_cols=198 Identities=12% Similarity=-0.026 Sum_probs=100.3
Q ss_pred CcEEEEee-CCCcEEEEccCCcceee-CCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCCc
Q 016891 109 NGLIAFKN-DENGIALWNPSTEEHLI-LPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTNS 186 (381)
Q Consensus 109 ~GLl~~~~-~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~ 186 (381)
++++.+.. ....+.|+|+.|++... +|... ...++.+++. +.|-.+. . . ...+.+|+..+.+
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~-------~p~~v~~SpD-Gr~lyv~--~--~----dg~V~viD~~~~t 229 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTYEIKTVLDTGY-------AVHISRLSAS-GRYLFVI--G--R----DGKVNMIDLWMKE 229 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTCCEEEEEECSS-------CEEEEEECTT-SCEEEEE--E--T----TSEEEEEETTSSS
T ss_pred CceEEEEeCCCCeEEEEECCCCeEEEEEeCCC-------CccceEECCC-CCEEEEE--c--C----CCeEEEEECCCCC
Confidence 44555444 56789999999987664 44221 1124445543 3443332 1 1 1468888885211
Q ss_pred EEEcccCCCcceecCCCcEEE------CCe-eEEEEeeCCCCCCcCEEEEEECCCCee-eeecCCCC-CCC---CCc-ee
Q 016891 187 WRRIRVDFPYYILHGWDGTFA------DGH-VHWLVTNNPEDYIENLIIAFNLKSEEF-HEVPLPHL-ENR---NDV-LV 253 (381)
Q Consensus 187 W~~~~~~~p~~~~~~~~~v~~------nG~-lYwl~~~~~~~~~~~~i~~fD~~~e~~-~~i~~P~~-~~~---~~~-~~ 253 (381)
-+.+. .++.... . .++.+ +|. +|....... .+.++|..+.+- ..++.... .+. +.. ..
T Consensus 230 ~~~v~-~i~~G~~-P-~~ia~s~~~~pDGk~l~v~n~~~~------~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rv 300 (567)
T 1qks_A 230 PTTVA-EIKIGSE-A-RSIETSKMEGWEDKYAIAGAYWPP------QYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRV 300 (567)
T ss_dssp CCEEE-EEECCSE-E-EEEEECCSTTCTTTEEEEEEEETT------EEEEEETTTCCEEEEEECCEECTTTCCEESCCCE
T ss_pred CcEeE-EEecCCC-C-ceeEEccccCCCCCEEEEEEccCC------eEEEEECCCCcEEEEEeccccccccccccCCCce
Confidence 12222 2221111 0 23333 574 555544432 789999877544 33443221 110 000 11
Q ss_pred EEEEEE-CCeEEEEEecCCCceEEEEEEC---CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEE
Q 016891 254 MFVGNF-SGCLYFSCLCNYPQPVDIWVLM---GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELF 329 (381)
Q Consensus 254 ~~L~~~-~G~L~~~~~~~~~~~~~iW~l~---~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~ 329 (381)
..+... ++...++...... + ||..+ ....++..|+ .+...+-.++.++|.++++.. ...++|.
T Consensus 301 a~i~~s~~~~~~vv~~~~~g-~--v~~vd~~~~~~~~v~~i~--~~~~~~d~~~~pdgr~~~va~--------~~sn~V~ 367 (567)
T 1qks_A 301 AAILASHYRPEFIVNVKETG-K--ILLVDYTDLNNLKTTEIS--AERFLHDGGLDGSHRYFITAA--------NARNKLV 367 (567)
T ss_dssp EEEEECSSSSEEEEEETTTT-E--EEEEETTCSSEEEEEEEE--CCSSEEEEEECTTSCEEEEEE--------GGGTEEE
T ss_pred EEEEEcCCCCEEEEEecCCC-e--EEEEecCCCccceeeeee--ccccccCceECCCCCEEEEEe--------CCCCeEE
Confidence 123323 3444444443322 4 45544 4455555565 223455677888898676663 3456799
Q ss_pred EEeCCCCceeeeeEEE
Q 016891 330 WYDLQNQGAAADQVTI 345 (381)
Q Consensus 330 ~yd~~t~~~~~~~v~~ 345 (381)
++|++++++. ..+.+
T Consensus 368 ViD~~t~kl~-~~i~v 382 (567)
T 1qks_A 368 VIDTKEGKLV-AIEDT 382 (567)
T ss_dssp EEETTTTEEE-EEEEC
T ss_pred EEECCCCcEE-EEEec
Confidence 9999999882 34444
No 164
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=56.92 E-value=91 Score=26.50 Aligned_cols=107 Identities=9% Similarity=0.030 Sum_probs=52.5
Q ss_pred EEEEEECCCCeee-eecCCCCCCCCCceeEEEEEE-CCe-EEEEEecCCCceEEEEEEC-CceeEEEEecC-C-CCCeeE
Q 016891 226 LIIAFNLKSEEFH-EVPLPHLENRNDVLVMFVGNF-SGC-LYFSCLCNYPQPVDIWVLM-GCWTKTFSFPR-S-VGDYVK 299 (381)
Q Consensus 226 ~i~~fD~~~e~~~-~i~~P~~~~~~~~~~~~L~~~-~G~-L~~~~~~~~~~~~~iW~l~-~~W~~~~~i~~-~-~~~~~~ 299 (381)
.|..+|+.+.+.. .+..+..... ...+... +|+ |++...... .+.+|.++ .+-.....++. . .+....
T Consensus 12 ~v~~~d~~~~~~~~~~~~~~~~~~----~~~~~~s~dg~~l~v~~~~~~--~v~~~d~~~~~~~~~~~~~~~~~~~~~~~ 85 (337)
T 1pby_B 12 KLVVIDTEKMAVDKVITIADAGPT----PMVPMVAPGGRIAYATVNKSE--SLVKIDLVTGETLGRIDLSTPEERVKSLF 85 (337)
T ss_dssp EEEEEETTTTEEEEEEECTTCTTC----CCCEEECTTSSEEEEEETTTT--EEEEEETTTCCEEEEEECCBTTEEEECTT
T ss_pred eEEEEECCCCcEEEEEEcCCCCCC----ccceEEcCCCCEEEEEeCCCC--eEEEEECCCCCeEeeEEcCCccccccccc
Confidence 7899999876553 3454431000 0123332 564 444443333 67777766 33222222221 0 001223
Q ss_pred EEEEEeCCCEEEEEecccCCc-ccc--CCcEEEEEeCCCCce
Q 016891 300 ALAYSKSGGKVLVDKFEYGED-EDI--NRWELFWYDLQNQGA 338 (381)
Q Consensus 300 ~~~~~~~g~~i~l~~~~~~~~-~~~--~~~~l~~yd~~t~~~ 338 (381)
-+.+.++|+.|++.....+.. ... ....+.+||+++++.
T Consensus 86 ~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~ 127 (337)
T 1pby_B 86 GAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSR 127 (337)
T ss_dssp CEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEE
T ss_pred ceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcE
Confidence 456677888666662100000 000 246799999998876
No 165
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=56.92 E-value=1e+02 Score=27.15 Aligned_cols=92 Identities=12% Similarity=0.069 Sum_probs=52.7
Q ss_pred EEEEEECCCCeeee-ecCCCCCCCCCceeEEEEEE-CCeEEEEEecCCCceEEEEEEC-CceeEEEEecCCCCCeeEEEE
Q 016891 226 LIIAFNLKSEEFHE-VPLPHLENRNDVLVMFVGNF-SGCLYFSCLCNYPQPVDIWVLM-GCWTKTFSFPRSVGDYVKALA 302 (381)
Q Consensus 226 ~i~~fD~~~e~~~~-i~~P~~~~~~~~~~~~L~~~-~G~L~~~~~~~~~~~~~iW~l~-~~W~~~~~i~~~~~~~~~~~~ 302 (381)
.|..+|+.+.+... +.... .....+.-. +|.+.++...++ .+.||.++ ..-. ..+.. ......-+.
T Consensus 228 ~i~~~d~~~~~~~~~~~~~~------~~i~~~~~~~~~~~l~~~~~d~--~i~i~d~~~~~~~--~~~~~-~~~~i~~~~ 296 (425)
T 1r5m_A 228 AIFVYQITEKTPTGKLIGHH------GPISVLEFNDTNKLLLSASDDG--TLRIWHGGNGNSQ--NCFYG-HSQSIVSAS 296 (425)
T ss_dssp CEEEEETTCSSCSEEECCCS------SCEEEEEEETTTTEEEEEETTS--CEEEECSSSBSCS--EEECC-CSSCEEEEE
T ss_pred eEEEEEcCCCceeeeeccCC------CceEEEEECCCCCEEEEEcCCC--EEEEEECCCCccc--eEecC-CCccEEEEE
Confidence 69999998764322 22111 112233333 566666655555 78999887 3222 22221 113345566
Q ss_pred EEeCCCEEEEEecccCCccccCCcEEEEEeCCCCce
Q 016891 303 YSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGA 338 (381)
Q Consensus 303 ~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~ 338 (381)
+.+++ .++.. .....+.+||+++++.
T Consensus 297 ~~~~~-~l~~~---------~~d~~i~i~d~~~~~~ 322 (425)
T 1r5m_A 297 WVGDD-KVISC---------SMDGSVRLWSLKQNTL 322 (425)
T ss_dssp EETTT-EEEEE---------ETTSEEEEEETTTTEE
T ss_pred ECCCC-EEEEE---------eCCCcEEEEECCCCcE
Confidence 67677 45555 4566799999988876
No 166
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=56.81 E-value=2e+02 Score=30.33 Aligned_cols=190 Identities=16% Similarity=0.212 Sum_probs=95.4
Q ss_pred Cc-EEEEeeCCCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCCcE
Q 016891 109 NG-LIAFKNDENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTNSW 187 (381)
Q Consensus 109 ~G-Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W 187 (381)
+| +|.....+..+.|||..|++...--.. + ......+.+.+.. .+-+ ... . ...+.|++..++.-
T Consensus 626 ~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~---h--~~~v~~~~~s~~~-~~l~--s~~--~----d~~v~vwd~~~~~~ 691 (1249)
T 3sfz_A 626 DGQRIASCGADKTLQVFKAETGEKLLDIKA---H--EDEVLCCAFSSDD-SYIA--TCS--A----DKKVKIWDSATGKL 691 (1249)
T ss_dssp TSSEEEEEETTSCEEEEETTTCCEEEEECC---C--SSCEEEEEECTTS-SEEE--EEE--T----TSEEEEEETTTCCE
T ss_pred CCCEEEEEeCCCeEEEEECCCCCEEEEecc---C--CCCEEEEEEecCC-CEEE--EEe--C----CCeEEEEECCCCce
Confidence 44 344344667899999999876542111 1 1223445555532 3322 221 1 15688999888753
Q ss_pred EEcccCCCcceecCCCcEEEC---CeeEEEEeeCCCCCCcCEEEEEECCCCeeeeecCCCCCCCCCceeEEEEEE-CCeE
Q 016891 188 RRIRVDFPYYILHGWDGTFAD---GHVHWLVTNNPEDYIENLIIAFNLKSEEFHEVPLPHLENRNDVLVMFVGNF-SGCL 263 (381)
Q Consensus 188 ~~~~~~~p~~~~~~~~~v~~n---G~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~-~G~L 263 (381)
...-....... ..+.+. +..+..++... ..|..+|+.+.+....-.... .....+.-. +|.+
T Consensus 692 ~~~~~~~~~~v----~~~~~~~~~~~~~l~sg~~d-----~~v~vwd~~~~~~~~~~~~h~-----~~v~~~~~sp~~~~ 757 (1249)
T 3sfz_A 692 VHTYDEHSEQV----NCCHFTNKSNHLLLATGSND-----FFLKLWDLNQKECRNTMFGHT-----NSVNHCRFSPDDEL 757 (1249)
T ss_dssp EEEEECCSSCE----EEEEECSSSSCCEEEEEETT-----SCEEEEETTSSSEEEEECCCS-----SCEEEEEECSSTTE
T ss_pred EEEEcCCCCcE----EEEEEecCCCceEEEEEeCC-----CeEEEEECCCcchhheecCCC-----CCEEEEEEecCCCE
Confidence 32210111111 222221 22222232222 268999998765433211111 112223332 5776
Q ss_pred EEEEecCCCceEEEEEEC-CceeEEEEecCC----------CCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEe
Q 016891 264 YFSCLCNYPQPVDIWVLM-GCWTKTFSFPRS----------VGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYD 332 (381)
Q Consensus 264 ~~~~~~~~~~~~~iW~l~-~~W~~~~~i~~~----------~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd 332 (381)
.+.+..++ .+.+|.+. ..-......... .......+.+.++|..++.. ....+..||
T Consensus 758 l~s~s~dg--~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~----------~~~~v~~~d 825 (1249)
T 3sfz_A 758 LASCSADG--TLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVA----------AKNKVLLFD 825 (1249)
T ss_dssp EEEEESSS--EEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEE----------ETTEEEEEE
T ss_pred EEEEECCC--eEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEE----------cCCcEEEEE
Confidence 66666555 79999988 332322222210 11233445566788845444 356799999
Q ss_pred CCCCce
Q 016891 333 LQNQGA 338 (381)
Q Consensus 333 ~~t~~~ 338 (381)
+.++..
T Consensus 826 ~~~~~~ 831 (1249)
T 3sfz_A 826 IHTSGL 831 (1249)
T ss_dssp TTTCCE
T ss_pred ecCCCc
Confidence 998887
No 167
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=55.30 E-value=93 Score=26.09 Aligned_cols=91 Identities=14% Similarity=0.229 Sum_probs=53.1
Q ss_pred EEEEEECCCCeee-eecCCCCCCCCCceeEEEEEE-CCeEEEEEecCCCceEEEEEEC-CceeEEEEecCCCCCeeEEEE
Q 016891 226 LIIAFNLKSEEFH-EVPLPHLENRNDVLVMFVGNF-SGCLYFSCLCNYPQPVDIWVLM-GCWTKTFSFPRSVGDYVKALA 302 (381)
Q Consensus 226 ~i~~fD~~~e~~~-~i~~P~~~~~~~~~~~~L~~~-~G~L~~~~~~~~~~~~~iW~l~-~~W~~~~~i~~~~~~~~~~~~ 302 (381)
.|..+|+.+.+.. .+..... ....+.-. +|.| +....++ .+.||.++ .+-....... .....-+.
T Consensus 206 ~i~i~d~~~~~~~~~~~~~~~------~i~~~~~~~~~~l-~~~~~dg--~v~iwd~~~~~~~~~~~~~---~~~i~~~~ 273 (313)
T 3odt_A 206 LIKLVDMHTGDVLRTYEGHES------FVYCIKLLPNGDI-VSCGEDR--TVRIWSKENGSLKQVITLP---AISIWSVD 273 (313)
T ss_dssp EEEEEETTTCCEEEEEECCSS------CEEEEEECTTSCE-EEEETTS--EEEEECTTTCCEEEEEECS---SSCEEEEE
T ss_pred eEEEEECCchhhhhhhhcCCc------eEEEEEEecCCCE-EEEecCC--EEEEEECCCCceeEEEecc---CceEEEEE
Confidence 7999999865442 2232211 12233333 4543 3333333 89999887 4433333222 12355667
Q ss_pred EEeCCCEEEEEecccCCccccCCcEEEEEeCCCCce
Q 016891 303 YSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGA 338 (381)
Q Consensus 303 ~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~ 338 (381)
+.++|. ++.. ..+..+.+||++++++
T Consensus 274 ~~~~~~-~~~~---------~~dg~i~iw~~~~~~~ 299 (313)
T 3odt_A 274 CMSNGD-IIVG---------SSDNLVRIFSQEKSRW 299 (313)
T ss_dssp ECTTSC-EEEE---------ETTSCEEEEESCGGGC
T ss_pred EccCCC-EEEE---------eCCCcEEEEeCCCCce
Confidence 777887 6555 3566799999999988
No 168
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=55.17 E-value=1.2e+02 Score=27.46 Aligned_cols=191 Identities=10% Similarity=0.060 Sum_probs=94.6
Q ss_pred cEEEEeeCCCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCC----
Q 016891 110 GLIAFKNDENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTN---- 185 (381)
Q Consensus 110 GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~---- 185 (381)
..|++.. ...+...++.++....+-+. .....++.+|+..+ ++.+.- . ....+..++..+.
T Consensus 84 ~~ll~~~-~~~I~~i~l~~~~~~~~~~~------~~~~~~l~~d~~~~--~lywsD----~--~~~~I~~~~~~g~~~~~ 148 (400)
T 3p5b_L 84 AYLFFTN-RHEVRKMTLDRSEYTSLIPN------LRNVVALDTEVASN--RIYWSD----L--SQRMICSTQLDRAHGVS 148 (400)
T ss_dssp CEEEEEE-TTEEEEECTTSCSCEEEECS------CSCEEEEEEETTTT--EEEEEE----T--TTTEEEEEEC------C
T ss_pred ceeEEec-cceeEEEccCCcceeEeccc------cCcceEEeeeeccC--ceEEEe----c--CCCeEEEEEcccCCCCC
Confidence 3455443 34566667666655443211 12345777787655 333321 1 1134455555431
Q ss_pred cEEEcccCCCcceecCCCcEEE---CCeeEEEEeeCCCCCCcCEEEEEECCCCeeeeecCCCCCCCCCceeEEEEE--EC
Q 016891 186 SWRRIRVDFPYYILHGWDGTFA---DGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEVPLPHLENRNDVLVMFVGN--FS 260 (381)
Q Consensus 186 ~W~~~~~~~p~~~~~~~~~v~~---nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~--~~ 260 (381)
....+. .. ... ...++.+ +|.|||...... .|.++|+.......+- ..... ....|+. .+
T Consensus 149 ~~~~~~-~~--~~~-~p~glavD~~~~~lY~~d~~~~------~I~~~~~~g~~~~~l~-~~~~~----~P~~iavdp~~ 213 (400)
T 3p5b_L 149 SYDTVI-SR--DIQ-APDGLAVDWIHSNIYWTDSVLG------TVSVADTKGVKRKTLF-RENGS----KPRAIVVDPVH 213 (400)
T ss_dssp CCEEEE-CS--SCS-CEEEEEEETTTTEEEEEETTTT------EEEEECTTTCSEEEEE-ECSSC----CEEEEEEETTT
T ss_pred cceEEE-eC--CCC-CcccEEEEecCCceEEEECCCC------eEEEEeCCCCceEEEE-eCCCC----CcceEEEeccc
Confidence 122221 10 000 0144444 689999876543 7999999876544331 11111 1123333 36
Q ss_pred CeEEEEEecCCCceEEEEEECCceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCceee
Q 016891 261 GCLYFSCLCNYPQPVDIWVLMGCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGAAA 340 (381)
Q Consensus 261 G~L~~~~~~~~~~~~~iW~l~~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~~~ 340 (381)
|.|++....... .+....|+.+-.+.. +...+ ....-+++..+++.||+.- .....|..+|++....
T Consensus 214 g~ly~td~~~~~-~I~~~~~dG~~~~~~-~~~~l-~~P~glavd~~~~~lY~aD--------~~~~~I~~~d~dG~~~-- 280 (400)
T 3p5b_L 214 GFMYWTDWGTPA-KIKKGGLNGVDIYSL-VTENI-QWPNGITLDLLSGRLYWVD--------SKLHSISSIDVNGGNR-- 280 (400)
T ss_dssp TEEEEEECSSSC-CEEEEETTSCSCEEE-ECSSC-SCEEEEEEETTTTEEEEEE--------TTTTEEEEEETTSCCC--
T ss_pred CeEEEEeCCCCC-EEEEEeCCCCccEEE-EECCC-CceEEEEEEeCCCEEEEEE--------CCCCEEEEEeCCCCcc--
Confidence 888887754322 444444443222211 22111 2344566665566688882 3456799999988776
Q ss_pred eeE
Q 016891 341 DQV 343 (381)
Q Consensus 341 ~~v 343 (381)
+.+
T Consensus 281 ~~~ 283 (400)
T 3p5b_L 281 KTI 283 (400)
T ss_dssp EEE
T ss_pred EEE
Confidence 555
No 169
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=55.05 E-value=1.6e+02 Score=28.75 Aligned_cols=185 Identities=11% Similarity=0.099 Sum_probs=93.1
Q ss_pred EEEeeCCCcEEEEccCCccee-eCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCCcEEEc
Q 016891 112 IAFKNDENGIALWNPSTEEHL-ILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTNSWRRI 190 (381)
Q Consensus 112 l~~~~~~~~~~V~NP~T~~~~-~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W~~~ 190 (381)
|++.. ...+...+..+.... .+|-... ....++.+|+..+ +|++.-. ....+..++..+...+.+
T Consensus 9 Ll~s~-~~~I~~i~l~~~~~~~~~~~~~~-----~~~~~l~~d~~~~--~lywtD~------~~~~I~r~~~~g~~~~~v 74 (628)
T 4a0p_A 9 LLFSR-RADIRRISLETNNNNVAIPLTGV-----KEASALDFDVTDN--RIYWTDI------SLKTISRAFMNGSALEHV 74 (628)
T ss_dssp EEEEE-TTEEEEEESSCTTCEEECCCCSC-----SCEEEEEEETTTT--EEEEEET------TTTEEEEEETTSCSCEEE
T ss_pred EEEEe-CCcEEEEECCCCCcceEEEcCCC-----CceEEEEEECCCC--EEEEEEC------CCCeEEEEECCCCCcEEE
Confidence 44442 345556666554432 3443221 1356788887766 3333311 114556666665555444
Q ss_pred ccCCCcceecCCCcEEE---CCeeEEEEeeCCCCCCcCEEEEEECCCCeeeeecCCCCCCCCCceeEEEEE--ECCeEEE
Q 016891 191 RVDFPYYILHGWDGTFA---DGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEVPLPHLENRNDVLVMFVGN--FSGCLYF 265 (381)
Q Consensus 191 ~~~~p~~~~~~~~~v~~---nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~--~~G~L~~ 265 (381)
. ... .. ...++.+ +|.|||...... .|.++|+....-+.+-. .... ....|+. .+|.||+
T Consensus 75 ~-~~g--~~-~P~GlAvD~~~~~LY~tD~~~~------~I~v~~~dG~~~~~l~~-~~l~----~P~~iavdp~~G~lY~ 139 (628)
T 4a0p_A 75 V-EFG--LD-YPEGMAVDWLGKNLYWADTGTN------RIEVSKLDGQHRQVLVW-KDLD----SPRALALDPAEGFMYW 139 (628)
T ss_dssp E-CSS--CS-CCCEEEEETTTTEEEEEETTTT------EEEEEETTSTTCEEEEC-SSCC----CEEEEEEETTTTEEEE
T ss_pred E-eCC--CC-CcceEEEEeCCCEEEEEECCCC------EEEEEecCCCcEEEEEe-CCCC----CcccEEEccCCCeEEE
Confidence 3 111 11 1155665 589999765442 89999997654333311 1111 1223443 3788888
Q ss_pred EEecCCCceEEEEEEC-CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCce
Q 016891 266 SCLCNYPQPVDIWVLM-GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGA 338 (381)
Q Consensus 266 ~~~~~~~~~~~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~ 338 (381)
....... ++....|+ ..-..+ +.. . ....-+++..++++||+.. .....|..+|+++...
T Consensus 140 tD~g~~~-~I~r~~~dG~~~~~l--~~~-~-~~P~GlalD~~~~~LY~aD--------~~~~~I~~~d~dG~~~ 200 (628)
T 4a0p_A 140 TEWGGKP-KIDRAAMDGSERTTL--VPN-V-GRANGLTIDYAKRRLYWTD--------LDTNLIESSNMLGLNR 200 (628)
T ss_dssp EECSSSC-EEEEEETTSCSCEEE--ECS-C-SSEEEEEEETTTTEEEEEE--------TTTTEEEEEETTSCSC
T ss_pred eCCCCCC-EEEEEeCCCCceEEE--ECC-C-CCcceEEEccccCEEEEEE--------CCCCEEEEEcCCCCce
Confidence 7753222 44444444 221111 121 1 2233455555566677772 3345688888877655
No 170
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=53.94 E-value=1.2e+02 Score=27.01 Aligned_cols=194 Identities=13% Similarity=0.119 Sum_probs=95.2
Q ss_pred cCcEE-EEeeCCCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCCc
Q 016891 108 CNGLI-AFKNDENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTNS 186 (381)
Q Consensus 108 ~~GLl-~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~ 186 (381)
.+|-+ +....+..+.|||..+++....-.. + ......+.+.+... + ++.. . . ...+.+++.+++.
T Consensus 133 ~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~---h--~~~v~~~~~~p~~~-~-l~s~-s--~----d~~v~iwd~~~~~ 198 (393)
T 1erj_A 133 PDGKFLATGAEDRLIRIWDIENRKIVMILQG---H--EQDIYSLDYFPSGD-K-LVSG-S--G----DRTVRIWDLRTGQ 198 (393)
T ss_dssp TTSSEEEEEETTSCEEEEETTTTEEEEEECC---C--SSCEEEEEECTTSS-E-EEEE-E--T----TSEEEEEETTTTE
T ss_pred CCCCEEEEEcCCCeEEEEECCCCcEEEEEcc---C--CCCEEEEEEcCCCC-E-EEEe-c--C----CCcEEEEECCCCe
Confidence 35544 4444677899999998876543211 1 11234455555432 2 2221 1 1 1568888888775
Q ss_pred EEEcccCCCcceecCCCcEEE---CCeeEEEEeeCCCCCCcCEEEEEECCCCeee-eecCCCCC-CCCCceeEEEEEE-C
Q 016891 187 WRRIRVDFPYYILHGWDGTFA---DGHVHWLVTNNPEDYIENLIIAFNLKSEEFH-EVPLPHLE-NRNDVLVMFVGNF-S 260 (381)
Q Consensus 187 W~~~~~~~p~~~~~~~~~v~~---nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~-~i~~P~~~-~~~~~~~~~L~~~-~ 260 (381)
-...- ...... ..+.+ +|.+...+..+. .|..+|+.+.... .+..+... ..+...-..+.-. +
T Consensus 199 ~~~~~-~~~~~v----~~~~~~~~~~~~l~~~s~d~------~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~ 267 (393)
T 1erj_A 199 CSLTL-SIEDGV----TTVAVSPGDGKYIAAGSLDR------AVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRD 267 (393)
T ss_dssp EEEEE-ECSSCE----EEEEECSTTCCEEEEEETTS------CEEEEETTTCCEEEEEC------CCCSSCEEEEEECTT
T ss_pred eEEEE-EcCCCc----EEEEEECCCCCEEEEEcCCC------cEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCC
Confidence 43322 111111 12222 455444444332 6889998876542 22222111 1111122233333 5
Q ss_pred CeEEEEEecCCCceEEEEEEC-Cce----------eEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEE
Q 016891 261 GCLYFSCLCNYPQPVDIWVLM-GCW----------TKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELF 329 (381)
Q Consensus 261 G~L~~~~~~~~~~~~~iW~l~-~~W----------~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~ 329 (381)
|++.+....++ .+.||.++ ..- .....+.. ......-+++.+++..|+-. ..+..+.
T Consensus 268 g~~l~s~s~d~--~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~sg---------s~D~~v~ 335 (393)
T 1erj_A 268 GQSVVSGSLDR--SVKLWNLQNANNKSDSKTPNSGTCEVTYIG-HKDFVLSVATTQNDEYILSG---------SKDRGVL 335 (393)
T ss_dssp SSEEEEEETTS--EEEEEEC---------------CEEEEEEC-CSSCEEEEEECGGGCEEEEE---------ETTSEEE
T ss_pred CCEEEEEeCCC--EEEEEECCCCCCcccccCCCCCcceEEEec-ccCcEEEEEECCCCCEEEEE---------eCCCeEE
Confidence 77666666555 89999987 111 01111110 11234456666777744444 3566799
Q ss_pred EEeCCCCce
Q 016891 330 WYDLQNQGA 338 (381)
Q Consensus 330 ~yd~~t~~~ 338 (381)
+||+++++.
T Consensus 336 iwd~~~~~~ 344 (393)
T 1erj_A 336 FWDKKSGNP 344 (393)
T ss_dssp EEETTTCCE
T ss_pred EEECCCCeE
Confidence 999998876
No 171
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=53.31 E-value=1.7e+02 Score=28.59 Aligned_cols=196 Identities=9% Similarity=0.009 Sum_probs=98.7
Q ss_pred cEEEEccCCccee--eCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCCcEEEcccCCCcc
Q 016891 120 GIALWNPSTEEHL--ILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTNSWRRIRVDFPYY 197 (381)
Q Consensus 120 ~~~V~NP~T~~~~--~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W~~~~~~~p~~ 197 (381)
.+++++.-|++.. .+-..+. .. .......+.+. +.+-++.... ......+.+++..++.|+.+..... .
T Consensus 203 ~v~~~~l~t~~~~~~lv~~~~~-~~--~~~~~~~~SpD-G~~l~~~~~~----~~~~~~l~~~~~~~~~~~~l~~~~~-~ 273 (695)
T 2bkl_A 203 TIRYHTLGTEPSKDTVVHERTG-DP--TTFLQSDLSRD-GKYLFVYILR----GWSENDVYWKRPGEKDFRLLVKGVG-A 273 (695)
T ss_dssp EEEEEETTSCGGGCEEEECCCC-CT--TCEEEEEECTT-SCCEEEEEEE----TTTEEEEEEECTTCSSCEEEEECSS-C
T ss_pred EEEEEECCCCchhceEEEecCC-CC--EEEEEEEECCC-CCEEEEEEeC----CCCceEEEEEcCCCCceEEeecCCC-c
Confidence 3889998887632 2222111 11 11223444433 3444433322 1012456666666678887762111 1
Q ss_pred eecCCCcEEECCeeEEEEeeCCCCCCcCEEEEEECCCCe---eeeecCCCCCCCCCceeEEEEEECCeEEEEEecCCCce
Q 016891 198 ILHGWDGTFADGHVHWLVTNNPEDYIENLIIAFNLKSEE---FHEVPLPHLENRNDVLVMFVGNFSGCLYFSCLCNYPQP 274 (381)
Q Consensus 198 ~~~~~~~v~~nG~lYwl~~~~~~~~~~~~i~~fD~~~e~---~~~i~~P~~~~~~~~~~~~L~~~~G~L~~~~~~~~~~~ 274 (381)
. ...+..+|.+|+.+..+ .....|..+|+.+.. |+.+-.+.... ....+...+|.|.+....++ .
T Consensus 274 ~---~~~~~~~g~l~~~s~~~---~~~~~l~~~d~~~~~~~~~~~l~~~~~~~----~l~~~~~~~~~lv~~~~~dg--~ 341 (695)
T 2bkl_A 274 K---YEVHAWKDRFYVLTDEG---APRQRVFEVDPAKPARASWKEIVPEDSSA----SLLSVSIVGGHLSLEYLKDA--T 341 (695)
T ss_dssp C---EEEEEETTEEEEEECTT---CTTCEEEEEBTTBCSGGGCEEEECCCSSC----EEEEEEEETTEEEEEEEETT--E
T ss_pred e---EEEEecCCcEEEEECCC---CCCCEEEEEeCCCCCccCCeEEecCCCCC----eEEEEEEECCEEEEEEEECC--E
Confidence 1 13344577776665422 112489999997643 66552221110 11223334888888777666 6
Q ss_pred EEEEEECCceeEEEEec-CCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCceeeeeEE
Q 016891 275 VDIWVLMGCWTKTFSFP-RSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGAAADQVT 344 (381)
Q Consensus 275 ~~iW~l~~~W~~~~~i~-~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~~~~~v~ 344 (381)
..||.++..=.....+. +..+ ....+...++++.|++..... .....++.||+++++. +.+.
T Consensus 342 ~~l~~~~~~g~~~~~l~~~~~~-~v~~~~~s~d~~~l~~~~ss~-----~~P~~v~~~d~~~g~~--~~l~ 404 (695)
T 2bkl_A 342 SEVRVATLKGKPVRTVQLPGVG-AASNLMGLEDLDDAYYVFTSF-----TTPRQIYKTSVSTGKS--ELWA 404 (695)
T ss_dssp EEEEEEETTCCEEEECCCSSSS-EECCCBSCTTCSEEEEEEEET-----TEEEEEEEEETTTCCE--EEEE
T ss_pred EEEEEEeCCCCeeEEecCCCCe-EEEEeecCCCCCEEEEEEcCC-----CCCCEEEEEECCCCcE--EEEe
Confidence 77888771111333443 1111 122233345676566652101 2235699999999887 6663
No 172
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=52.74 E-value=1.3e+02 Score=27.03 Aligned_cols=86 Identities=21% Similarity=0.339 Sum_probs=51.0
Q ss_pred eeeecCCCCCCCCCceeEEEEE-ECCeEEEEEecCCCceEEEEEEC-CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEe
Q 016891 237 FHEVPLPHLENRNDVLVMFVGN-FSGCLYFSCLCNYPQPVDIWVLM-GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDK 314 (381)
Q Consensus 237 ~~~i~~P~~~~~~~~~~~~L~~-~~G~L~~~~~~~~~~~~~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~ 314 (381)
++.+..|...++ +...|.. ..+.+..+.. +. .+.||-.+ .+-.+...+.. .+..+.-+++.++|..|+..
T Consensus 94 ~~~l~ap~~~~d---~y~~~l~wS~~n~lAvgl-d~--tV~lWd~~tg~~~~~~~~~~-~~~~V~sv~fspdg~~lasg- 165 (420)
T 4gga_A 94 DRILDAPEIRND---YYLNLVDWSSGNVLAVAL-DN--SVYLWSASSGDILQLLQMEQ-PGEYISSVAWIKEGNYLAVG- 165 (420)
T ss_dssp SEEEECTTCCCC---TTCBCEEECTTSEEEEEE-TT--EEEEEETTTCCEEEEEECCS-TTCCEEEEEECTTSSEEEEE-
T ss_pred ceEEECCCCccc---ccceeEEECCCCEEEEEe-CC--EEEEEECCCCCEEEEEEecC-CCCcEEEEEECCCCCEEEEE-
Confidence 344455654432 2333333 3333333333 33 89999988 66566555542 12346677888899844444
Q ss_pred cccCCccccCCcEEEEEeCCCCce
Q 016891 315 FEYGEDEDINRWELFWYDLQNQGA 338 (381)
Q Consensus 315 ~~~~~~~~~~~~~l~~yd~~t~~~ 338 (381)
..+..+.+||+++++.
T Consensus 166 --------s~Dg~v~iWd~~~~~~ 181 (420)
T 4gga_A 166 --------TSSAEVQLWDVQQQKR 181 (420)
T ss_dssp --------ETTSCEEEEETTTTEE
T ss_pred --------ECCCeEEEEEcCCCcE
Confidence 4566799999999877
No 173
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=52.59 E-value=1.9e+02 Score=28.86 Aligned_cols=198 Identities=10% Similarity=0.124 Sum_probs=101.9
Q ss_pred cCcEEEEeeCCCcEEEEccCCcceeeCCCCCCCC---CCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCC
Q 016891 108 CNGLIAFKNDENGIALWNPSTEEHLILPKFWGDL---KDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRT 184 (381)
Q Consensus 108 ~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~---~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t 184 (381)
.+|-|-+......+..+||.++++...+...... .......++..|.. +. .+++... ...+..|+..+
T Consensus 366 ~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~-g~--~lWigt~------~~Gl~~~d~~~ 436 (795)
T 4a2l_A 366 KDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEK-KS--LVYIGTH------AGGLSILHRNS 436 (795)
T ss_dssp TTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETT-TT--EEEEEET------TTEEEEEETTT
T ss_pred CCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCC-CC--EEEEEeC------cCceeEEeCCC
Confidence 4555555444557888899888887765332100 00112333444432 21 1333320 13577888888
Q ss_pred CcEEEcccCCCcceecCC-CcEEE--CCeeEEEEeeCCCCCCcCEEEEEECCCCeeeeecCC---CCCCCCCceeEEEEE
Q 016891 185 NSWRRIRVDFPYYILHGW-DGTFA--DGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEVPLP---HLENRNDVLVMFVGN 258 (381)
Q Consensus 185 ~~W~~~~~~~p~~~~~~~-~~v~~--nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~~P---~~~~~~~~~~~~L~~ 258 (381)
+.++......+. ..... .+++. +|.| |++... .|..||..+++|..+... ..... .....+.+
T Consensus 437 ~~~~~~~~~~~~-l~~~~v~~i~~d~~g~l-wigt~~-------Gl~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~i~~ 505 (795)
T 4a2l_A 437 GQVENFNQRNSQ-LVNENVYAILPDGEGNL-WLGTLS-------ALVRFNPEQRSFTTIEKEKDGTPVVS--KQITTLFR 505 (795)
T ss_dssp CCEEEECTTTSC-CSCSCEEEEEECSSSCE-EEEESS-------CEEEEETTTTEEEECCBCTTCCBCCC--CCEEEEEE
T ss_pred CcEEEeecCCCC-cCCCeeEEEEECCCCCE-EEEecC-------ceeEEeCCCCeEEEccccccccccCC--ceEEEEEE
Confidence 888776511111 11111 23333 4555 455443 589999999999877432 11111 12233444
Q ss_pred -ECCeEEEEEecCCCceEEEEEEC-CceeEEEEe-c-C-CCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeC
Q 016891 259 -FSGCLYFSCLCNYPQPVDIWVLM-GCWTKTFSF-P-R-SVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDL 333 (381)
Q Consensus 259 -~~G~L~~~~~~~~~~~~~iW~l~-~~W~~~~~i-~-~-~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~ 333 (381)
.+|.|.+... . -+..+..+ ..+ ..... . . .......-+....+|. |.+. +.. .++.||+
T Consensus 506 d~~g~lWigt~-~---Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~-lWig---------T~~-Gl~~~d~ 569 (795)
T 4a2l_A 506 DSHKRLWIGGE-E---GLSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEASNGI-IWVG---------TRE-GFYCFNE 569 (795)
T ss_dssp CTTCCEEEEES-S---CEEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECTTSC-EEEE---------ESS-CEEEEET
T ss_pred CCCCCEEEEeC-C---ceEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECCCCC-EEEE---------eCC-CceeECC
Confidence 3688888775 3 24445444 555 21110 1 1 1112233333344566 7777 444 6999999
Q ss_pred CCCceeeeeE
Q 016891 334 QNQGAAADQV 343 (381)
Q Consensus 334 ~t~~~~~~~v 343 (381)
+++++ +.+
T Consensus 570 ~~~~~--~~~ 577 (795)
T 4a2l_A 570 KDKQI--KRY 577 (795)
T ss_dssp TTTEE--EEE
T ss_pred CCCcE--EEe
Confidence 99998 765
No 174
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=52.56 E-value=1e+02 Score=25.79 Aligned_cols=188 Identities=13% Similarity=0.042 Sum_probs=90.6
Q ss_pred cCcEEEEeeCCCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCC-c
Q 016891 108 CNGLIAFKNDENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTN-S 186 (381)
Q Consensus 108 ~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~-~ 186 (381)
.+++|+....+..+.|||..+++....-... ......+.+.+. +.+-+ ... . ...+.+++..+. .
T Consensus 28 ~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~-----~~~v~~~~~~~~-~~~l~--~~~--~----dg~i~~~~~~~~~~ 93 (313)
T 3odt_A 28 DDSKVASVSRDGTVRLWSKDDQWLGTVVYTG-----QGFLNSVCYDSE-KELLL--FGG--K----DTMINGVPLFATSG 93 (313)
T ss_dssp ETTEEEEEETTSEEEEEEESSSEEEEEEEEC-----SSCEEEEEEETT-TTEEE--EEE--T----TSCEEEEETTCCTT
T ss_pred CCCEEEEEEcCCcEEEEECCCCEEEEEeecC-----CccEEEEEECCC-CCEEE--Eec--C----CCeEEEEEeeecCC
Confidence 3445555556677889998777654432221 112334555553 22222 211 1 134555555432 1
Q ss_pred EEEcccCCCcceecCC-CcEEECCeeEEEEeeCCCCCCcCEEEEEECCCCeeeeecCCCCCCCCCceeEEEEEECCeEEE
Q 016891 187 WRRIRVDFPYYILHGW-DGTFADGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEVPLPHLENRNDVLVMFVGNFSGCLYF 265 (381)
Q Consensus 187 W~~~~~~~p~~~~~~~-~~v~~nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~~G~L~~ 265 (381)
.+.+. ... ..... ..+.++|.....+..+. .|..+|.... ...+...... -........++.+.+
T Consensus 94 ~~~~~-~~~--~~~~~i~~~~~~~~~l~~~~~d~------~i~~~d~~~~-~~~~~~~~~~----v~~~~~~~~~~~~l~ 159 (313)
T 3odt_A 94 EDPLY-TLI--GHQGNVCSLSFQDGVVISGSWDK------TAKVWKEGSL-VYNLQAHNAS----VWDAKVVSFSENKFL 159 (313)
T ss_dssp SCC-C-EEC--CCSSCEEEEEEETTEEEEEETTS------EEEEEETTEE-EEEEECCSSC----EEEEEEEETTTTEEE
T ss_pred CCccc-chh--hcccCEEEEEecCCEEEEEeCCC------CEEEEcCCcE-EEecccCCCc----eeEEEEccCCCCEEE
Confidence 11111 000 00011 44455666555444432 7888883322 2222221111 112222232677666
Q ss_pred EEecCCCceEEEEEECCceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCce
Q 016891 266 SCLCNYPQPVDIWVLMGCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGA 338 (381)
Q Consensus 266 ~~~~~~~~~~~iW~l~~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~ 338 (381)
+...++ .+.+|... .....+..........+.+.+++. ++.. .....+.+||+++++.
T Consensus 160 ~~~~d~--~i~i~d~~---~~~~~~~~~~~~~i~~~~~~~~~~-~~~~---------~~dg~i~i~d~~~~~~ 217 (313)
T 3odt_A 160 TASADK--TIKLWQND---KVIKTFSGIHNDVVRHLAVVDDGH-FISC---------SNDGLIKLVDMHTGDV 217 (313)
T ss_dssp EEETTS--CEEEEETT---EEEEEECSSCSSCEEEEEEEETTE-EEEE---------ETTSEEEEEETTTCCE
T ss_pred EEECCC--CEEEEecC---ceEEEEeccCcccEEEEEEcCCCe-EEEc---------cCCCeEEEEECCchhh
Confidence 666655 78999733 112222211223456677777776 5555 4566799999998776
No 175
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=52.36 E-value=1.1e+02 Score=26.02 Aligned_cols=141 Identities=13% Similarity=0.058 Sum_probs=71.2
Q ss_pred eEEEEEEcCCC--cEEEcccCCCcceecCCCcEEECCeeEEEEeeCCCCCCcCEEEEEECCCCeeeeecCCCCCCCCCce
Q 016891 175 TEIAVYSLRTN--SWRRIRVDFPYYILHGWDGTFADGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEVPLPHLENRNDVL 252 (381)
Q Consensus 175 ~~~~vyss~t~--~W~~~~~~~p~~~~~~~~~v~~nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~ 252 (381)
..+.+++.+++ .|+.-. .-.... ....+.-||.++. +... .|..||...+.-..+..|... .
T Consensus 15 ~~v~~~d~~tG~~~w~~~~-~~~~~~--~~~~~~pdG~ilv-s~~~-------~V~~~d~~G~~~W~~~~~~~~-----~ 78 (276)
T 3no2_A 15 NKIAIINKDTKEIVWEYPL-EKGWEC--NSVAATKAGEILF-SYSK-------GAKMITRDGRELWNIAAPAGC-----E 78 (276)
T ss_dssp SEEEEEETTTTEEEEEEEC-CTTCCC--CEEEECTTSCEEE-ECBS-------EEEEECTTSCEEEEEECCTTC-----E
T ss_pred CEEEEEECCCCeEEEEeCC-CccCCC--cCeEECCCCCEEE-eCCC-------CEEEECCCCCEEEEEcCCCCc-----c
Confidence 56778887776 577544 110000 0012223788777 4332 799999954433334444221 1
Q ss_pred eEEEEE-ECCeEEEEEecCCCceEEEEEEC--CceeEEEEecCC-CC--CeeEEEEEEeCCCEEEEEecccCCccccCCc
Q 016891 253 VMFVGN-FSGCLYFSCLCNYPQPVDIWVLM--GCWTKTFSFPRS-VG--DYVKALAYSKSGGKVLVDKFEYGEDEDINRW 326 (381)
Q Consensus 253 ~~~L~~-~~G~L~~~~~~~~~~~~~iW~l~--~~W~~~~~i~~~-~~--~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~ 326 (381)
...... .+|.+.++..... -.|+.++ .+......+... .+ .....+....+|+ +++.. ....
T Consensus 79 ~~~~~~~~dG~~lv~~~~~~---~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~-~lv~~--------~~~~ 146 (276)
T 3no2_A 79 MQTARILPDGNALVAWCGHP---STILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGN-YLVPL--------FATS 146 (276)
T ss_dssp EEEEEECTTSCEEEEEESTT---EEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSC-EEEEE--------TTTT
T ss_pred ccccEECCCCCEEEEecCCC---CEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCC-EEEEe--------cCCC
Confidence 112223 3677766655421 2455655 333333333311 01 1122234556888 55552 4566
Q ss_pred EEEEEeCCCCceeeeeEEE
Q 016891 327 ELFWYDLQNQGAAADQVTI 345 (381)
Q Consensus 327 ~l~~yd~~t~~~~~~~v~~ 345 (381)
.++.||++.+.+ .++..
T Consensus 147 ~v~~~d~~G~~~--w~~~~ 163 (276)
T 3no2_A 147 EVREIAPNGQLL--NSVKL 163 (276)
T ss_dssp EEEEECTTSCEE--EEEEC
T ss_pred EEEEECCCCCEE--EEEEC
Confidence 799999996666 55543
No 176
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=52.21 E-value=1.3e+02 Score=26.82 Aligned_cols=92 Identities=21% Similarity=0.188 Sum_probs=53.4
Q ss_pred EEEEEECCCCeeeee-cCCCCCCCCCceeEEEEEE-CCeEEEEEecCCCceEEEEEEC-CceeEEEEecCCCCCeeEEEE
Q 016891 226 LIIAFNLKSEEFHEV-PLPHLENRNDVLVMFVGNF-SGCLYFSCLCNYPQPVDIWVLM-GCWTKTFSFPRSVGDYVKALA 302 (381)
Q Consensus 226 ~i~~fD~~~e~~~~i-~~P~~~~~~~~~~~~L~~~-~G~L~~~~~~~~~~~~~iW~l~-~~W~~~~~i~~~~~~~~~~~~ 302 (381)
.|..+|+.+.+.... .... ..-..+.-. +|...+....++ .+.||.++ .+-....... .....+.
T Consensus 146 ~i~iwd~~~~~~~~~~~~h~------~~v~~~~~~p~~~~l~s~s~d~--~v~iwd~~~~~~~~~~~~~----~~v~~~~ 213 (393)
T 1erj_A 146 LIRIWDIENRKIVMILQGHE------QDIYSLDYFPSGDKLVSGSGDR--TVRIWDLRTGQCSLTLSIE----DGVTTVA 213 (393)
T ss_dssp CEEEEETTTTEEEEEECCCS------SCEEEEEECTTSSEEEEEETTS--EEEEEETTTTEEEEEEECS----SCEEEEE
T ss_pred eEEEEECCCCcEEEEEccCC------CCEEEEEEcCCCCEEEEecCCC--cEEEEECCCCeeEEEEEcC----CCcEEEE
Confidence 688999988765433 2111 112233333 566655555555 89999888 4433333322 2345566
Q ss_pred EEe-CCCEEEEEecccCCccccCCcEEEEEeCCCCce
Q 016891 303 YSK-SGGKVLVDKFEYGEDEDINRWELFWYDLQNQGA 338 (381)
Q Consensus 303 ~~~-~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~ 338 (381)
+.+ +|. +++.+ ..+..+.+||+++++.
T Consensus 214 ~~~~~~~-~l~~~--------s~d~~v~iwd~~~~~~ 241 (393)
T 1erj_A 214 VSPGDGK-YIAAG--------SLDRAVRVWDSETGFL 241 (393)
T ss_dssp ECSTTCC-EEEEE--------ETTSCEEEEETTTCCE
T ss_pred EECCCCC-EEEEE--------cCCCcEEEEECCCCcE
Confidence 666 676 44442 3456699999988765
No 177
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=51.86 E-value=1.2e+02 Score=26.31 Aligned_cols=66 Identities=9% Similarity=-0.136 Sum_probs=41.1
Q ss_pred CCeEEEEEecCCCceEEEEEEC-CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCce
Q 016891 260 SGCLYFSCLCNYPQPVDIWVLM-GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGA 338 (381)
Q Consensus 260 ~G~L~~~~~~~~~~~~~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~ 338 (381)
+|.+.+....++ .+.+|.++ ..-....... ......-+.+.++|. ++..+ ..+..+.+||+++++.
T Consensus 138 ~~~~l~s~s~dg--~i~~wd~~~~~~~~~~~~~--~~~~i~~~~~~pdg~-~lasg--------~~dg~i~iwd~~~~~~ 204 (343)
T 3lrv_A 138 NTEYFIWADNRG--TIGFQSYEDDSQYIVHSAK--SDVEYSSGVLHKDSL-LLALY--------SPDGILDVYNLSSPDQ 204 (343)
T ss_dssp -CCEEEEEETTC--CEEEEESSSSCEEEEECCC--SSCCCCEEEECTTSC-EEEEE--------CTTSCEEEEESSCTTS
T ss_pred CCCEEEEEeCCC--cEEEEECCCCcEEEEEecC--CCCceEEEEECCCCC-EEEEE--------cCCCEEEEEECCCCCC
Confidence 456666566555 79999998 3322222111 112355677788888 55552 3556799999999887
No 178
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=51.55 E-value=1.2e+02 Score=26.43 Aligned_cols=112 Identities=12% Similarity=0.071 Sum_probs=59.8
Q ss_pred CCeeEEEEeeCCCCCCcCEEEEEECCCCeeeeecCCCCCCCCCceeEEEEE--ECCeEEEEEecCCCceEEEEEECCcee
Q 016891 208 DGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEVPLPHLENRNDVLVMFVGN--FSGCLYFSCLCNYPQPVDIWVLMGCWT 285 (381)
Q Consensus 208 nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~--~~G~L~~~~~~~~~~~~~iW~l~~~W~ 285 (381)
+|.|||...... .|.++|+....-+.+.. .... ....++. .+|.|++....... .+....++.+-.
T Consensus 90 ~g~ly~~d~~~~------~I~~~~~dG~~~~~l~~-~~~~----~P~giavdp~~g~ly~td~~~~~-~I~r~~~dG~~~ 157 (318)
T 3sov_A 90 GEKLYWTDSETN------RIEVSNLDGSLRKVLFW-QELD----QPRAIALDPSSGFMYWTDWGEVP-KIERAGMDGSSR 157 (318)
T ss_dssp TTEEEEEETTTT------EEEEEETTSCSCEEEEC-SSCS----SEEEEEEEGGGTEEEEEECSSSC-EEEEEETTSCSC
T ss_pred CCeEEEEECCCC------EEEEEECCCCcEEEEEe-CCCC----CccEEEEeCCCCEEEEEecCCCC-EEEEEEcCCCCe
Confidence 689999875442 79999998654333311 1111 1123333 36888887643222 433333333322
Q ss_pred EEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCceeeeeE
Q 016891 286 KTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGAAADQV 343 (381)
Q Consensus 286 ~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~~~~~v 343 (381)
+.. +...+ ....-+++..+++.||+.- .....|..+|++.... +.+
T Consensus 158 ~~~-~~~~l-~~Pnglavd~~~~~lY~aD--------~~~~~I~~~d~dG~~~--~~~ 203 (318)
T 3sov_A 158 FII-INSEI-YWPNGLTLDYEEQKLYWAD--------AKLNFIHKSNLDGTNR--QAV 203 (318)
T ss_dssp EEE-ECSSC-SCEEEEEEETTTTEEEEEE--------TTTTEEEEEETTSCSC--EEE
T ss_pred EEE-EECCC-CCccEEEEeccCCEEEEEE--------CCCCEEEEEcCCCCce--EEE
Confidence 211 22111 2334566666566688882 3456788999887665 544
No 179
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=51.24 E-value=1.3e+02 Score=26.61 Aligned_cols=141 Identities=11% Similarity=0.058 Sum_probs=71.8
Q ss_pred eEEEEEEcCCCcEEEcc-cCCCcceecCCCcEEE---CCeeEEEEeeCCCCCCcCEEEEEECCCC--eeeeecCCCCCCC
Q 016891 175 TEIAVYSLRTNSWRRIR-VDFPYYILHGWDGTFA---DGHVHWLVTNNPEDYIENLIIAFNLKSE--EFHEVPLPHLENR 248 (381)
Q Consensus 175 ~~~~vyss~t~~W~~~~-~~~p~~~~~~~~~v~~---nG~lYwl~~~~~~~~~~~~i~~fD~~~e--~~~~i~~P~~~~~ 248 (381)
..+.+|+.+++.-...- ...+......-..+.+ +|.+...+..+. .|-.+|+... ....+.....
T Consensus 180 ~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~------~v~~wd~~~~~~~~~~~~~h~~--- 250 (380)
T 3iz6_a 180 QTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDT------TVRLWDLRITSRAVRTYHGHEG--- 250 (380)
T ss_dssp SCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTS------CEEEEETTTTCCCCEEECCCSS---
T ss_pred CcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCC------eEEEEECCCCCcceEEECCcCC---
Confidence 45777887776543221 0111111000022233 445444444332 6889998632 2222221111
Q ss_pred CCceeEEEEEE-CCeEEEEEecCCCceEEEEEEC-CceeEEEEecCCC----CCeeEEEEEEeCCCEEEEEecccCCccc
Q 016891 249 NDVLVMFVGNF-SGCLYFSCLCNYPQPVDIWVLM-GCWTKTFSFPRSV----GDYVKALAYSKSGGKVLVDKFEYGEDED 322 (381)
Q Consensus 249 ~~~~~~~L~~~-~G~L~~~~~~~~~~~~~iW~l~-~~W~~~~~i~~~~----~~~~~~~~~~~~g~~i~l~~~~~~~~~~ 322 (381)
.-..+.-. +|.+.+....++ .+.||.+. ..-...+...... ......+++.++|. +++.+
T Consensus 251 ---~v~~v~~~p~~~~l~s~s~D~--~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~g-------- 316 (380)
T 3iz6_a 251 ---DINSVKFFPDGQRFGTGSDDG--TCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGR-LLFAG-------- 316 (380)
T ss_dssp ---CCCEEEECTTSSEEEEECSSS--CEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSS-EEEEE--------
T ss_pred ---CeEEEEEecCCCeEEEEcCCC--eEEEEECCCCcEEEEecccccccccccCceEEEEECCCCC-EEEEE--------
Confidence 11123333 567666665555 79999998 4323333222111 02345678888898 55553
Q ss_pred cCCcEEEEEeCCCCce
Q 016891 323 INRWELFWYDLQNQGA 338 (381)
Q Consensus 323 ~~~~~l~~yd~~t~~~ 338 (381)
.....+.+||..+.+.
T Consensus 317 ~~dg~i~vwd~~~~~~ 332 (380)
T 3iz6_a 317 YSNGDCYVWDTLLAEM 332 (380)
T ss_dssp CTTSCEEEEETTTCCE
T ss_pred ECCCCEEEEECCCCce
Confidence 4566799999988776
No 180
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=50.81 E-value=1.9e+02 Score=28.46 Aligned_cols=187 Identities=9% Similarity=0.053 Sum_probs=94.7
Q ss_pred CcEEEEeeCCCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCC-cE
Q 016891 109 NGLIAFKNDENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTN-SW 187 (381)
Q Consensus 109 ~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~-~W 187 (381)
+.+|.....+..+.|||..+++....-.. +. .....+.+.+... + ++ ... ....+.+|+..++ ..
T Consensus 67 ~~~l~~~~~dg~i~vw~~~~~~~~~~~~~---~~--~~v~~~~~s~~~~-~-l~-~~~------~dg~i~vw~~~~~~~~ 132 (814)
T 3mkq_A 67 KNWIIVGSDDFRIRVFNYNTGEKVVDFEA---HP--DYIRSIAVHPTKP-Y-VL-SGS------DDLTVKLWNWENNWAL 132 (814)
T ss_dssp GTEEEEEETTSEEEEEETTTCCEEEEEEC---CS--SCEEEEEECSSSS-E-EE-EEE------TTSEEEEEEGGGTSEE
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEEec---CC--CCEEEEEEeCCCC-E-EE-EEc------CCCEEEEEECCCCceE
Confidence 34455555677899999988876542211 11 1233444444322 2 22 221 1146788888765 22
Q ss_pred EEcccCCCcceecCCCcEEE---CCeeEEEEeeCCCCCCcCEEEEEECCCCeeee-ecCCCCCCCCCceeEEEEEE---C
Q 016891 188 RRIRVDFPYYILHGWDGTFA---DGHVHWLVTNNPEDYIENLIIAFNLKSEEFHE-VPLPHLENRNDVLVMFVGNF---S 260 (381)
Q Consensus 188 ~~~~~~~p~~~~~~~~~v~~---nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~-i~~P~~~~~~~~~~~~L~~~---~ 260 (381)
...-....... ..+.+ +|.....+..+. .|..+|+.+.+... +..+... ....+.-. +
T Consensus 133 ~~~~~~~~~~v----~~~~~~p~~~~~l~~~~~dg------~v~vwd~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~ 197 (814)
T 3mkq_A 133 EQTFEGHEHFV----MCVAFNPKDPSTFASGCLDR------TVKVWSLGQSTPNFTLTTGQER-----GVNYVDYYPLPD 197 (814)
T ss_dssp EEEEECCSSCE----EEEEEETTEEEEEEEEETTS------EEEEEETTCSSCSEEEECCCTT-----CCCEEEECCSTT
T ss_pred EEEEcCCCCcE----EEEEEEcCCCCEEEEEeCCC------eEEEEECCCCcceeEEecCCCC-----CEEEEEEEECCC
Confidence 22110111111 22333 344444444332 78999987654322 2222111 11122222 5
Q ss_pred CeEEEEEecCCCceEEEEEEC-CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCce
Q 016891 261 GCLYFSCLCNYPQPVDIWVLM-GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGA 338 (381)
Q Consensus 261 G~L~~~~~~~~~~~~~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~ 338 (381)
|.+.++...++ .+.+|.++ .. ....+.. .......+.+.++|..|+.. ..+..+.+||+.+.+.
T Consensus 198 ~~~l~~~~~dg--~i~~~d~~~~~--~~~~~~~-~~~~v~~~~~~~~~~~l~~~---------~~dg~v~vwd~~~~~~ 262 (814)
T 3mkq_A 198 KPYMITASDDL--TIKIWDYQTKS--CVATLEG-HMSNVSFAVFHPTLPIIISG---------SEDGTLKIWNSSTYKV 262 (814)
T ss_dssp CCEEEEECTTS--EEEEEETTTTE--EEEEEEC-CSSCEEEEEECSSSSEEEEE---------ETTSCEEEEETTTCSE
T ss_pred CCEEEEEeCCC--EEEEEECCCCc--EEEEEcC-CCCCEEEEEEcCCCCEEEEE---------eCCCeEEEEECCCCcE
Confidence 66666666555 79999887 33 2233321 11335566777888844444 3456799999998766
No 181
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=50.20 E-value=1.2e+02 Score=25.70 Aligned_cols=97 Identities=16% Similarity=0.191 Sum_probs=56.8
Q ss_pred EEEEEECCCC--eeeee-cCCCCCCCCCceeEEEEEE---CCeEEEEEecCCCceEEEEEEC--------CceeEEEEec
Q 016891 226 LIIAFNLKSE--EFHEV-PLPHLENRNDVLVMFVGNF---SGCLYFSCLCNYPQPVDIWVLM--------GCWTKTFSFP 291 (381)
Q Consensus 226 ~i~~fD~~~e--~~~~i-~~P~~~~~~~~~~~~L~~~---~G~L~~~~~~~~~~~~~iW~l~--------~~W~~~~~i~ 291 (381)
.|..+|+.++ .+..+ .+.... ..-..+.-. +|.+.+....++ .+.||.++ ..|.....+.
T Consensus 34 ~i~iw~~~~~~~~~~~~~~~~~~~----~~v~~~~~~~~~d~~~l~s~~~dg--~v~vwd~~~~~~~~~~~~~~~~~~~~ 107 (351)
T 3f3f_A 34 HIKVFKLDKDTSNWELSDSWRAHD----SSIVAIDWASPEYGRIIASASYDK--TVKLWEEDPDQEECSGRRWNKLCTLN 107 (351)
T ss_dssp EEEEEEECSSSCCEEEEEEEECCS----SCEEEEEECCGGGCSEEEEEETTS--CEEEEEECTTSCTTSSCSEEEEEEEC
T ss_pred eEEEEECCCCCCcceecceeccCC----CcEEEEEEcCCCCCCEEEEEcCCC--eEEEEecCCCcccccccCcceeeeec
Confidence 6888888754 22222 111111 112233333 377777766665 79999998 3466666665
Q ss_pred CCCCCeeEEEEEEeC--CCEEEEEecccCCccccCCcEEEEEeCCCCce
Q 016891 292 RSVGDYVKALAYSKS--GGKVLVDKFEYGEDEDINRWELFWYDLQNQGA 338 (381)
Q Consensus 292 ~~~~~~~~~~~~~~~--g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~ 338 (381)
... ....-+.+.++ +..++.. ..+..+.+||+++.+.
T Consensus 108 ~~~-~~v~~~~~~~~~~~~~l~~~---------~~dg~v~iwd~~~~~~ 146 (351)
T 3f3f_A 108 DSK-GSLYSVKFAPAHLGLKLACL---------GNDGILRLYDALEPSD 146 (351)
T ss_dssp CCS-SCEEEEEECCGGGCSEEEEE---------ETTCEEEEEECSSTTC
T ss_pred ccC-CceeEEEEcCCCCCcEEEEe---------cCCCcEEEecCCChHH
Confidence 211 33556667777 7744444 4566799999987764
No 182
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=48.82 E-value=1.9e+02 Score=27.79 Aligned_cols=194 Identities=10% Similarity=-0.054 Sum_probs=97.4
Q ss_pred CcEEEEccCC------cceeeCC-CCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCc--cceEEEEEEcC-CCcE-
Q 016891 119 NGIALWNPST------EEHLILP-KFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNV--GYTEIAVYSLR-TNSW- 187 (381)
Q Consensus 119 ~~~~V~NP~T------~~~~~LP-~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~--~~~~~~vyss~-t~~W- 187 (381)
..++++|..+ ++...|. ... .......+.|. +.+ ++..... .... ....+.+++.. ++.+
T Consensus 161 ~~i~~~~~~~~~~~~~~~~~~l~~~~~------~~~~~~~~SpD-G~~-la~~~~~-~~~~~~~~~~i~~~d~~~~g~~~ 231 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSAVRELSDDAH------RFVTGPRLSPD-GRQ-AVWLAWD-HPRMPWEGTELKTARVTEDGRFA 231 (662)
T ss_dssp EEEEEEETTSTTTTCGGGSEESSCSCS------SEECCCEECTT-SSE-EEEEEEC-TTCCTTTCEEEEEEEECTTSCEE
T ss_pred eEEEEEECCCCccccCCceeEEEecCC------CcccCceECCC-CCE-EEEEECC-CCCCCCCCcEEEEEEECCCCccc
Confidence 4799999998 7777765 321 11222333332 332 2222210 1000 12578899988 5743
Q ss_pred --EEcccCCCcceecCCCcEE--ECCeeEEEEeeCCCCCCcCEEEEEECCCCeeeee-cCCCCCCCCCce---eEEEEEE
Q 016891 188 --RRIRVDFPYYILHGWDGTF--ADGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEV-PLPHLENRNDVL---VMFVGNF 259 (381)
Q Consensus 188 --~~~~~~~p~~~~~~~~~v~--~nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~---~~~L~~~ 259 (381)
+.+........ ..+. -+|.+|+.+..+. ...|..+|+.+.++..+ +....... ..+ ...+...
T Consensus 232 ~~~~l~~~~~~~~----~~~~~spdg~l~~~~~~~~----~~~l~~~~~~~~~~~~l~~~~~~~~~-p~w~~~~~~~~~~ 302 (662)
T 3azo_A 232 DTRTLLGGPEEAI----AQAEWAPDGSLIVATDRTG----WWNLHRVDPATGAATQLCRREEEFAG-PLWTPGMRWFAPL 302 (662)
T ss_dssp EEEEEEEETTBCE----EEEEECTTSCEEEEECTTS----SCEEEEECTTTCCEEESSCCSSBSSC-CCCSTTCCSEEEC
T ss_pred ccEEeCCCCCceE----cceEECCCCeEEEEECCCC----CeEEEEEECCCCceeecccccccccC-ccccccCceEeEe
Confidence 33331101111 1222 2788888775432 23789999977777655 22211100 000 1123333
Q ss_pred -CCeEEEEEecCCCceEEEEEEC-CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCc
Q 016891 260 -SGCLYFSCLCNYPQPVDIWVLM-GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQG 337 (381)
Q Consensus 260 -~G~L~~~~~~~~~~~~~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~ 337 (381)
+|++++.... + ...||.++ .. .+...+.... .....+. ..+++.+++... .......++.+|+++++
T Consensus 303 ~~~~~~~~~~~-~--~~~l~~~d~~~-~~~~~l~~~~-~~~~~~~-s~~~~~~~~~~~-----~~~~~~~i~~~d~~~g~ 371 (662)
T 3azo_A 303 ANGLIAVVHGK-G--AAVLGILDPES-GELVDAAGPW-TEWAATL-TVSGTRAVGVAA-----SPRTAYEVVELDTVTGR 371 (662)
T ss_dssp TTSCEEEEEBS-S--SCEEEEEETTT-TEEEECCSSC-CEEEEEE-EEETTEEEEEEE-----ETTEEEEEEEEETTTCC
T ss_pred CCCEEEEEEEc-C--ccEEEEEECCC-CcEEEecCCC-CeEEEEE-ecCCCEEEEEEc-----CCCCCCEEEEEECCCCc
Confidence 6787776665 3 78899887 21 1233444211 1222231 445665666631 10122369999999998
Q ss_pred eeeeeE
Q 016891 338 AAADQV 343 (381)
Q Consensus 338 ~~~~~v 343 (381)
. +.+
T Consensus 372 ~--~~l 375 (662)
T 3azo_A 372 A--RTI 375 (662)
T ss_dssp E--EEE
T ss_pred e--EEe
Confidence 8 776
No 183
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=48.27 E-value=1.5e+02 Score=26.29 Aligned_cols=192 Identities=12% Similarity=0.080 Sum_probs=98.3
Q ss_pred CcEEEEeeCCCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCCcEE
Q 016891 109 NGLIAFKNDENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTNSWR 188 (381)
Q Consensus 109 ~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W~ 188 (381)
.+.|++.. ...+..+++.+.....+-... ....++.+|+..+ ++++.- . ....+..++..++.-+
T Consensus 44 ~~~ll~~~-~~~I~~i~~~g~~~~~~~~~~------~~~~~l~~d~~~~--~ly~~D----~--~~~~I~r~~~~g~~~~ 108 (349)
T 3v64_C 44 EPVLLFAN-RIDIRQVLPHRSEYTLLLNNL------ENAIALDFHHRRE--LVFWSD----V--TLDRILRANLNGSNVE 108 (349)
T ss_dssp CCEEEEEC-BSCEEEECTTSCCEEEEECSC------SCEEEEEEETTTT--EEEEEE----T--TTTEEEEEETTSCSCE
T ss_pred CceeEeec-ccceEEEeCCCCeeEEeecCC------CceEEEEEecccc--EEEEEe----c--cCCceEEEecCCCCce
Confidence 45555554 234667777665554432211 1245777787655 333221 1 1145667777665544
Q ss_pred EcccCCCcceecCCCcEEE---CCeeEEEEeeCCCCCCcCEEEEEECCCCeeeeecCCCCCCCCCceeEEEEEE--CCeE
Q 016891 189 RIRVDFPYYILHGWDGTFA---DGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEVPLPHLENRNDVLVMFVGNF--SGCL 263 (381)
Q Consensus 189 ~~~~~~p~~~~~~~~~v~~---nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~--~G~L 263 (381)
.+. ... .... .++.+ +|.|||...... .|.++|+....-..+. ..... ..-.++.- +|.|
T Consensus 109 ~~~-~~~--~~~p-~glavd~~~g~ly~~d~~~~------~I~~~~~dG~~~~~l~-~~~l~----~P~~iavdp~~g~l 173 (349)
T 3v64_C 109 EVV-STG--LESP-GGLAVDWVHDKLYWTDSGTS------RIEVANLDGAHRKVLL-WQSLE----KPRAIALHPMEGTI 173 (349)
T ss_dssp EEE-CSS--CSCC-CEEEEETTTTEEEEEETTTT------EEEEEETTSCSCEEEE-CTTCS----CEEEEEEETTTTEE
T ss_pred EEE-eCC--CCCc-cEEEEecCCCeEEEEcCCCC------eEEEEcCCCCceEEEE-eCCCC----CcceEEEecCcCeE
Confidence 432 111 1011 44444 689999876542 7999999865443331 11111 11234433 6788
Q ss_pred EEEEecCCCceEEEEEECCceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCceeeeeE
Q 016891 264 YFSCLCNYPQPVDIWVLMGCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGAAADQV 343 (381)
Q Consensus 264 ~~~~~~~~~~~~~iW~l~~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~~~~~v 343 (381)
++....... ++....++.+-.+. .+.... ....-+++..+++.||+.- .....|..+|+++... +.+
T Consensus 174 y~td~~~~~-~I~r~~~dG~~~~~-~~~~~~-~~PnGla~d~~~~~lY~aD--------~~~~~I~~~~~dG~~~--~~~ 240 (349)
T 3v64_C 174 YWTDWGNTP-RIEASSMDGSGRRI-IADTHL-FWPNGLTIDYAGRRMYWVD--------AKHHVIERANLDGSHR--KAV 240 (349)
T ss_dssp EEEECSSSC-EEEEEETTSCSCEE-SCCSSC-SCEEEEEEETTTTEEEEEE--------TTTTEEEEEETTSCSC--EEE
T ss_pred EEeccCCCC-EEEEEeCCCCCcEE-EEECCC-CCcceEEEeCCCCEEEEEE--------CCCCEEEEEeCCCCce--EEE
Confidence 887765412 44443344321111 111111 2344566665566688882 3456799999987665 444
No 184
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=48.12 E-value=1.4e+02 Score=25.91 Aligned_cols=199 Identities=13% Similarity=0.049 Sum_probs=96.2
Q ss_pred eEEcccCcEEEEeeCCCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECC-CCCEEEEEEEEEeecCccceEEEEEE
Q 016891 103 PIIDSCNGLIAFKNDENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAV-NDDYKVVRLVQLVIGNVGYTEIAVYS 181 (381)
Q Consensus 103 ~~~~s~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~-~~~ykVv~~~~~~~~~~~~~~~~vys 181 (381)
.+.++.+|.+.+-+....+.++|..+++...--... + ......+.+.+. .+.+-+ .. . . ...+.+|+
T Consensus 88 ~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~--~--~~~v~~~~~~~~~~~~~l~-s~-s--~----dg~i~~wd 155 (343)
T 3lrv_A 88 IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVD--S--ANEIIYMYGHNEVNTEYFI-WA-D--N----RGTIGFQS 155 (343)
T ss_dssp EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECC--C--SSCEEEEECCC---CCEEE-EE-E--T----TCCEEEEE
T ss_pred eEEecCCCeEEEEEccCceEEeecCCcceeEEeecC--C--CCCEEEEEcCCCCCCCEEE-EE-e--C----CCcEEEEE
Confidence 455666788777666667788888887733211111 1 112344555552 233322 11 1 1 14678888
Q ss_pred cCCCcEEEcccCCCcceecCCCcEEE--CCeeEEEEeeCCCCCCcCEEEEEECCCCeeeeecCCCCCCCCCceeEEEEEE
Q 016891 182 LRTNSWRRIRVDFPYYILHGWDGTFA--DGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEVPLPHLENRNDVLVMFVGNF 259 (381)
Q Consensus 182 s~t~~W~~~~~~~p~~~~~~~~~v~~--nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~ 259 (381)
.+++.-.... ........ ..+.+ +|.+...+..+. .|..+|+.+.+-....+... +...-..+.-.
T Consensus 156 ~~~~~~~~~~-~~~~~~~i--~~~~~~pdg~~lasg~~dg------~i~iwd~~~~~~~~~~~~~~---h~~~v~~l~fs 223 (343)
T 3lrv_A 156 YEDDSQYIVH-SAKSDVEY--SSGVLHKDSLLLALYSPDG------ILDVYNLSSPDQASSRFPVD---EEAKIKEVKFA 223 (343)
T ss_dssp SSSSCEEEEE-CCCSSCCC--CEEEECTTSCEEEEECTTS------CEEEEESSCTTSCCEECCCC---TTSCEEEEEEC
T ss_pred CCCCcEEEEE-ecCCCCce--EEEEECCCCCEEEEEcCCC------EEEEEECCCCCCCccEEecc---CCCCEEEEEEe
Confidence 8876543222 11110000 22222 455544444332 79999998765431122210 11122233333
Q ss_pred -CCeEEEEEecCCCceEEEEEEC-CceeEEEEecC----CCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeC
Q 016891 260 -SGCLYFSCLCNYPQPVDIWVLM-GCWTKTFSFPR----SVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDL 333 (381)
Q Consensus 260 -~G~L~~~~~~~~~~~~~iW~l~-~~W~~~~~i~~----~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~ 333 (381)
+|...+... ++ .+.||.+. .. ....+.. ........+++.++|..|+..+ .....+.+|+.
T Consensus 224 ~~g~~l~s~~-~~--~v~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s--------~~d~~i~v~~~ 290 (343)
T 3lrv_A 224 DNGYWMVVEC-DQ--TVVCFDLRKDV--GTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYS--------NESNSLTIYKF 290 (343)
T ss_dssp TTSSEEEEEE-SS--BEEEEETTSST--TCBSSCCCBC-----CCEEEEECTTSSEEEEEE--------TTTTEEEEEEE
T ss_pred CCCCEEEEEe-CC--eEEEEEcCCCC--cceeecccccccccccceEEEECCCCCEEEEec--------CCCCcEEEEEE
Confidence 566555555 44 79999988 21 0111110 0000013477778888555542 21556777776
Q ss_pred --CCCce
Q 016891 334 --QNQGA 338 (381)
Q Consensus 334 --~t~~~ 338 (381)
.++.|
T Consensus 291 ~~~~~~~ 297 (343)
T 3lrv_A 291 DKKTKNW 297 (343)
T ss_dssp CTTTCSE
T ss_pred cccccce
Confidence 55567
No 185
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=47.90 E-value=67 Score=29.06 Aligned_cols=50 Identities=12% Similarity=0.028 Sum_probs=34.0
Q ss_pred EEC-CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCcccc-CCcEEEEEeCCCCce
Q 016891 279 VLM-GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDI-NRWELFWYDLQNQGA 338 (381)
Q Consensus 279 ~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~-~~~~l~~yd~~t~~~ 338 (381)
+.+ .....+.+|+ .+....-+.+.++|+++++.+ . ....|-++|+.|++.
T Consensus 298 ViD~~t~~vv~~i~--vg~~p~gi~~s~Dg~~l~va~--------~~~~~~VsVID~~t~kv 349 (368)
T 1mda_H 298 SVTASVGQTSGPIS--NGHDSDAIIAAQDGASDNYAN--------SAGTEVLDIYDAASDQD 349 (368)
T ss_dssp EEESSSCCEEECCE--EEEEECEEEECCSSSCEEEEE--------ETTTTEEEEEESSSCEE
T ss_pred EEECCCCeEEEEEE--CCCCcceEEECCCCCEEEEEc--------cCCCCeEEEEECCCCcE
Confidence 555 5556666666 223344566677888677773 3 367899999999988
No 186
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=47.17 E-value=2.2e+02 Score=28.04 Aligned_cols=184 Identities=13% Similarity=0.092 Sum_probs=90.4
Q ss_pred EEEeeCCCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCCcEEEcc
Q 016891 112 IAFKNDENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTNSWRRIR 191 (381)
Q Consensus 112 l~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W~~~~ 191 (381)
|........+.|||..+++...--.. + ......+.+.+... + ++... ....+.+|+..++.....-
T Consensus 28 la~~~~~g~v~iwd~~~~~~~~~~~~---~--~~~v~~~~~s~~~~-~--l~~~~------~dg~i~vw~~~~~~~~~~~ 93 (814)
T 3mkq_A 28 VLTTLYSGRVEIWNYETQVEVRSIQV---T--ETPVRAGKFIARKN-W--IIVGS------DDFRIRVFNYNTGEKVVDF 93 (814)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEEC---C--SSCEEEEEEEGGGT-E--EEEEE------TTSEEEEEETTTCCEEEEE
T ss_pred EEEEeCCCEEEEEECCCCceEEEEec---C--CCcEEEEEEeCCCC-E--EEEEe------CCCeEEEEECCCCcEEEEE
Confidence 33333455678889888765442111 1 11234455555332 2 22221 1157889998887654322
Q ss_pred cCCCcceecCCCcEEE--CCeeEEEEeeCCCCCCcCEEEEEECCCC-eeeee-cCCCCCCCCCceeEEEEEE--CCeEEE
Q 016891 192 VDFPYYILHGWDGTFA--DGHVHWLVTNNPEDYIENLIIAFNLKSE-EFHEV-PLPHLENRNDVLVMFVGNF--SGCLYF 265 (381)
Q Consensus 192 ~~~p~~~~~~~~~v~~--nG~lYwl~~~~~~~~~~~~i~~fD~~~e-~~~~i-~~P~~~~~~~~~~~~L~~~--~G~L~~ 265 (381)
....... ..+.+ +|..-..+..+ ..|..+|+.+. ..... .... .....+.-. +|.+.+
T Consensus 94 ~~~~~~v----~~~~~s~~~~~l~~~~~d------g~i~vw~~~~~~~~~~~~~~~~------~~v~~~~~~p~~~~~l~ 157 (814)
T 3mkq_A 94 EAHPDYI----RSIAVHPTKPYVLSGSDD------LTVKLWNWENNWALEQTFEGHE------HFVMCVAFNPKDPSTFA 157 (814)
T ss_dssp ECCSSCE----EEEEECSSSSEEEEEETT------SEEEEEEGGGTSEEEEEEECCS------SCEEEEEEETTEEEEEE
T ss_pred ecCCCCE----EEEEEeCCCCEEEEEcCC------CEEEEEECCCCceEEEEEcCCC------CcEEEEEEEcCCCCEEE
Confidence 0111111 22222 34332233322 27899998775 33222 2111 112233333 455555
Q ss_pred EEecCCCceEEEEEEC-CceeEEEEecCCCCCeeEEEEEEe--CCCEEEEEecccCCccccCCcEEEEEeCCCCce
Q 016891 266 SCLCNYPQPVDIWVLM-GCWTKTFSFPRSVGDYVKALAYSK--SGGKVLVDKFEYGEDEDINRWELFWYDLQNQGA 338 (381)
Q Consensus 266 ~~~~~~~~~~~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~--~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~ 338 (381)
....++ .+.+|.+. ..-....... .......+.+.+ ++..|+.. .....+.+||+++++.
T Consensus 158 ~~~~dg--~v~vwd~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~~~---------~~dg~i~~~d~~~~~~ 220 (814)
T 3mkq_A 158 SGCLDR--TVKVWSLGQSTPNFTLTTG--QERGVNYVDYYPLPDKPYMITA---------SDDLTIKIWDYQTKSC 220 (814)
T ss_dssp EEETTS--EEEEEETTCSSCSEEEECC--CTTCCCEEEECCSTTCCEEEEE---------CTTSEEEEEETTTTEE
T ss_pred EEeCCC--eEEEEECCCCcceeEEecC--CCCCEEEEEEEECCCCCEEEEE---------eCCCEEEEEECCCCcE
Confidence 555555 79999887 3222211111 112244555555 77744444 4566799999988776
No 187
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=45.04 E-value=1.5e+02 Score=28.61 Aligned_cols=31 Identities=13% Similarity=0.186 Sum_probs=23.8
Q ss_pred CcEEECCeeEEEEeeCCCCCCcCEEEEEECCC--Ceeeee
Q 016891 203 DGTFADGHVHWLVTNNPEDYIENLIIAFNLKS--EEFHEV 240 (381)
Q Consensus 203 ~~v~~nG~lYwl~~~~~~~~~~~~i~~fD~~~--e~~~~i 240 (381)
.+++.+|.+|.....+ .|.++|..+ +.|+.-
T Consensus 63 ~P~v~~g~vyv~~~~~-------~v~AlD~~tG~~~W~~~ 95 (582)
T 1flg_A 63 QAIVSDGVIYVTASYS-------RLFALDAKTGKRLWTYN 95 (582)
T ss_dssp CCEEETTEEEEEETTT-------EEEEEESSSCCEEEEEE
T ss_pred ccEEECCEEEEEcCCC-------CEEEEECCCCcEEEEEc
Confidence 6788999999977643 599999865 567654
No 188
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=44.83 E-value=1.8e+02 Score=26.23 Aligned_cols=198 Identities=14% Similarity=0.135 Sum_probs=98.9
Q ss_pred cCcEEEEeeCCCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCcc--ceEEEEEEc--C
Q 016891 108 CNGLIAFKNDENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVG--YTEIAVYSL--R 183 (381)
Q Consensus 108 ~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~--~~~~~vyss--~ 183 (381)
...+++-......++|+|..-++...||... ........+| .-.....-++.+.. .+ ...+.+|+. .
T Consensus 39 ~~s~ii~t~k~~gL~Vydl~G~~l~~~~~g~--~nnVD~r~~~--~l~g~~~dla~as~-----R~~~~n~l~vf~iDp~ 109 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSLDGKMLHSYNTGK--LNNVDIRYDF--PLNGKKVDIAAASN-----RSEGKNTIEIYAIDGK 109 (355)
T ss_dssp GGCEEEEEETTTEEEEEETTSCEEEEECCSC--EEEEEEEEEE--EETTEEEEEEEEEE-----CSTTCCEEEEEEECTT
T ss_pred CccEEEEEcCCCCEEEEcCCCcEEEEccCCC--cccEEEeccc--ccCCceEeEEEEeC-----CCCCCCeEEEEEECCC
Confidence 4455554544567888888666666676422 1111122222 11111111222222 22 367888855 6
Q ss_pred CCcEEEcccCC--Cccee-cCCCcEEE-----CCeeEEEEeeCCCCCCcCEEEEEECC---CC-----eeeeecCCCCCC
Q 016891 184 TNSWRRIRVDF--PYYIL-HGWDGTFA-----DGHVHWLVTNNPEDYIENLIIAFNLK---SE-----EFHEVPLPHLEN 247 (381)
Q Consensus 184 t~~W~~~~~~~--p~~~~-~~~~~v~~-----nG~lYwl~~~~~~~~~~~~i~~fD~~---~e-----~~~~i~~P~~~~ 247 (381)
++.++.+. .+ |.... ..-.++++ .|.+|......++ .+..|++. +. .-+.+++|...
T Consensus 110 ~~~l~~i~-~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G-----~~~q~~l~~~~~g~~~~~lVR~f~lgsq~- 182 (355)
T 3amr_A 110 NGTLQSMT-DPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEG-----EFEQYELKADKNGYISGKKVRAFKMNSQT- 182 (355)
T ss_dssp TCCEEECS-CTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSS-----EEEEEEEEECTTSCEEEEEEEEEECSSCE-
T ss_pred CCceeecc-ccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCC-----eEEEEEEEeCCCCcccceEEEEecCCCCc-
Confidence 78899986 43 42111 11155555 3667766655432 56666652 22 22334555422
Q ss_pred CCCceeEEEEEECCeEEEEEecCCCceEEEEEEC-C-----ceeEEEEec-CCCCCeeEEEEE--EeCCC-EEEEEeccc
Q 016891 248 RNDVLVMFVGNFSGCLYFSCLCNYPQPVDIWVLM-G-----CWTKTFSFP-RSVGDYVKALAY--SKSGG-KVLVDKFEY 317 (381)
Q Consensus 248 ~~~~~~~~L~~~~G~L~~~~~~~~~~~~~iW~l~-~-----~W~~~~~i~-~~~~~~~~~~~~--~~~g~-~i~l~~~~~ 317 (381)
..+.+-.-.|.|++..-. ..||.+. + .-..+..++ ..+.....-+++ ..+|. +|+..+
T Consensus 183 ----EgcvvDd~~g~Lyv~eEd-----~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSs--- 250 (355)
T 3amr_A 183 ----EGMAADDEYGRLYIAEED-----EAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASS--- 250 (355)
T ss_dssp ----EEEEEETTTTEEEEEETT-----TEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEE---
T ss_pred ----ceEEEcCCCCeEEEeccc-----ceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEc---
Confidence 122222235788877654 2389998 2 355666665 222223333444 23444 466652
Q ss_pred CCccccCCcEEEEEeCC-CCce
Q 016891 318 GEDEDINRWELFWYDLQ-NQGA 338 (381)
Q Consensus 318 ~~~~~~~~~~l~~yd~~-t~~~ 338 (381)
-....+.+||.+ +++.
T Consensus 251 -----QG~~s~~Vydr~~~~~~ 267 (355)
T 3amr_A 251 -----QGNSSYAIYDRQGKNKY 267 (355)
T ss_dssp -----GGGTEEEEEESSTTCCE
T ss_pred -----CCCCEEEEEECCCCCcE
Confidence 234579999997 5554
No 189
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=44.52 E-value=1.6e+02 Score=25.55 Aligned_cols=200 Identities=8% Similarity=-0.050 Sum_probs=96.9
Q ss_pred cccCcEEEEee-CCCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCC
Q 016891 106 DSCNGLIAFKN-DENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRT 184 (381)
Q Consensus 106 ~s~~GLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t 184 (381)
...+|.+.+.+ ....++++||.+++...+.... ...++.+++. +. ++.... ..+.+|+..+
T Consensus 57 ~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~-------~v~~i~~~~d-g~--l~v~~~--------~gl~~~d~~~ 118 (326)
T 2ghs_A 57 DPASGTAWWFNILERELHELHLASGRKTVHALPF-------MGSALAKISD-SK--QLIASD--------DGLFLRDTAT 118 (326)
T ss_dssp ETTTTEEEEEEGGGTEEEEEETTTTEEEEEECSS-------CEEEEEEEET-TE--EEEEET--------TEEEEEETTT
T ss_pred eCCCCEEEEEECCCCEEEEEECCCCcEEEEECCC-------cceEEEEeCC-Ce--EEEEEC--------CCEEEEECCC
Confidence 33345554444 4567899999998876553221 1233444543 32 222211 3478888888
Q ss_pred CcEEEcccCCCcceecCC-CcEEE--CCeeEEEEeeCCCCCCcCEEEEEECCCCeeeeecCCCCCCCCCceeEEEEEE-C
Q 016891 185 NSWRRIRVDFPYYILHGW-DGTFA--DGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEVPLPHLENRNDVLVMFVGNF-S 260 (381)
Q Consensus 185 ~~W~~~~~~~p~~~~~~~-~~v~~--nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~-~ 260 (381)
+..+.+. ..+....... +.+.+ +|.+|+-............|..+| +.+...+.- ... ..-.++.. +
T Consensus 119 g~~~~~~-~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~--~~~----~~~~i~~s~d 189 (326)
T 2ghs_A 119 GVLTLHA-ELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFA--DIS----IPNSICFSPD 189 (326)
T ss_dssp CCEEEEE-CSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEE--EES----SEEEEEECTT
T ss_pred CcEEEEe-eCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeC--CCc----ccCCeEEcCC
Confidence 8887664 2221110001 23333 678765443211001123688888 455554311 110 01123333 5
Q ss_pred Ce-EEEEEecCCCceEEEEEEC---C-cee--E-EEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEe
Q 016891 261 GC-LYFSCLCNYPQPVDIWVLM---G-CWT--K-TFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYD 332 (381)
Q Consensus 261 G~-L~~~~~~~~~~~~~iW~l~---~-~W~--~-~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd 332 (381)
|+ |+++..... .+.+|.++ . ... + ...++.. .....-+.+..+|. |++.. .....|..||
T Consensus 190 g~~lyv~~~~~~--~I~~~d~~~~~Gl~~~~~~~~~~~~~~-~~~p~gi~~d~~G~-lwva~--------~~~~~v~~~d 257 (326)
T 2ghs_A 190 GTTGYFVDTKVN--RLMRVPLDARTGLPTGKAEVFIDSTGI-KGGMDGSVCDAEGH-IWNAR--------WGEGAVDRYD 257 (326)
T ss_dssp SCEEEEEETTTC--EEEEEEBCTTTCCBSSCCEEEEECTTS-SSEEEEEEECTTSC-EEEEE--------ETTTEEEEEC
T ss_pred CCEEEEEECCCC--EEEEEEcccccCCcccCceEEEECCCC-CCCCCeeEECCCCC-EEEEE--------eCCCEEEEEC
Confidence 64 666544332 55555553 2 211 1 1222211 12233345555676 77772 2346799999
Q ss_pred CCCCceeeeeEEEe
Q 016891 333 LQNQGAAADQVTIH 346 (381)
Q Consensus 333 ~~t~~~~~~~v~~~ 346 (381)
++++.. +.+...
T Consensus 258 ~~g~~~--~~i~~~ 269 (326)
T 2ghs_A 258 TDGNHI--ARYEVP 269 (326)
T ss_dssp TTCCEE--EEEECS
T ss_pred CCCCEE--EEEECC
Confidence 977777 666543
No 190
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=44.48 E-value=1.5e+02 Score=25.21 Aligned_cols=95 Identities=16% Similarity=0.106 Sum_probs=48.8
Q ss_pred EEEEEECCCCeeeeecCCCCCCCCCceeEEEEEE-C--CeEEEEEecCCCceEEEEEEC-CceeEEEEecCCCCCeeEEE
Q 016891 226 LIIAFNLKSEEFHEVPLPHLENRNDVLVMFVGNF-S--GCLYFSCLCNYPQPVDIWVLM-GCWTKTFSFPRSVGDYVKAL 301 (381)
Q Consensus 226 ~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~-~--G~L~~~~~~~~~~~~~iW~l~-~~W~~~~~i~~~~~~~~~~~ 301 (381)
.+..+|+....-.......... ....+... + +.+.+....+. .+.+|.++ ..- ...+.. ......-+
T Consensus 151 ~~~~~d~~~~~~~~~~~~~~~~----~v~~~~~~~~~~~~~~~s~~~d~--~i~i~d~~~~~~--~~~~~~-h~~~v~~~ 221 (340)
T 4aow_A 151 TIKLWNTLGVCKYTVQDESHSE----WVSCVRFSPNSSNPIIVSCGWDK--LVKVWNLANCKL--KTNHIG-HTGYLNTV 221 (340)
T ss_dssp CEEEECTTSCEEEEECSSSCSS----CEEEEEECSCSSSCEEEEEETTS--CEEEEETTTTEE--EEEECC-CSSCEEEE
T ss_pred eEEEEEeCCCceEEEEeccccC----cccceEEccCCCCcEEEEEcCCC--EEEEEECCCCce--eeEecC-CCCcEEEE
Confidence 5777887765443333221111 11122211 2 23444444444 78999887 332 222321 11234556
Q ss_pred EEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCce
Q 016891 302 AYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGA 338 (381)
Q Consensus 302 ~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~ 338 (381)
++.++|. +++.+ ..+..+.+||+++.+.
T Consensus 222 ~~s~~~~-~l~s~--------s~Dg~i~iwd~~~~~~ 249 (340)
T 4aow_A 222 TVSPDGS-LCASG--------GKDGQAMLWDLNEGKH 249 (340)
T ss_dssp EECTTSS-EEEEE--------ETTCEEEEEETTTTEE
T ss_pred EECCCCC-EEEEE--------eCCCeEEEEEeccCce
Confidence 7777888 44442 3556788999888766
No 191
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=43.51 E-value=1.8e+02 Score=25.92 Aligned_cols=67 Identities=12% Similarity=0.062 Sum_probs=40.6
Q ss_pred CCeEEEEEecCCCceEEEEEECCceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCce
Q 016891 260 SGCLYFSCLCNYPQPVDIWVLMGCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGA 338 (381)
Q Consensus 260 ~G~L~~~~~~~~~~~~~iW~l~~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~ 338 (381)
+|++.+-...+. .+.||.++..=....... ......-+++.+++..+++.. ..+..+.+||+++++.
T Consensus 155 d~~~las~s~D~--tv~~Wd~~~~~~~~~~~~--~~~~v~~v~~~p~~~~~l~~~--------~~d~~v~~wd~~t~~~ 221 (393)
T 4gq1_A 155 AEQVIASVGDDC--TLIIWRLTDEGPILAGYP--LSSPGISVQFRPSNPNQLIVG--------ERNGNIRIFDWTLNLS 221 (393)
T ss_dssp EEEEEEEEETTS--EEEEEEEETTEEEEEEEE--CSSCEEEEEEETTEEEEEEEE--------ETTSEEEEEETTCCC-
T ss_pred CCCEEEEEECCC--eEEEEECCCCceeeeecC--CCCCcEEEEECCCCCceEEec--------CCCCEEEEEECCCCcc
Confidence 567777666666 899999872212222222 112345567777765455553 3556799999998876
No 192
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=42.90 E-value=1.5e+02 Score=25.05 Aligned_cols=84 Identities=11% Similarity=0.168 Sum_probs=0.0
Q ss_pred CCeEEEEEecCCCceEEEEEEC-CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCce
Q 016891 260 SGCLYFSCLCNYPQPVDIWVLM-GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGA 338 (381)
Q Consensus 260 ~G~L~~~~~~~~~~~~~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~ 338 (381)
+|.+.+....++ .+.||.++ ..-........ .....+.+.+++..|+.. ..+..+.+||+++++.
T Consensus 24 ~~~~l~s~~~dg--~v~lWd~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~s~---------s~d~~i~vwd~~~~~~ 89 (304)
T 2ynn_A 24 TEPWVLTTLYSG--RVELWNYETQVEVRSIQVTE---TPVRAGKFIARKNWIIVG---------SDDFRIRVFNYNTGEK 89 (304)
T ss_dssp SSSEEEEEETTS--EEEEEETTTTEEEEEEECCS---SCEEEEEEEGGGTEEEEE---------ETTSEEEEEETTTCCE
T ss_pred CCCEEEEEcCCC--cEEEEECCCCceeEEeeccC---CcEEEEEEeCCCCEEEEE---------CCCCEEEEEECCCCcE
Q ss_pred eeeeEEEecCCCCceeEEEEeec
Q 016891 339 AADQVTIHGVPQGCRDTIVCVDS 361 (381)
Q Consensus 339 ~~~~v~~~~~~~~~~~~~~y~~s 361 (381)
...+.+.... ...+.+.+.
T Consensus 90 ---~~~~~~h~~~-v~~~~~~~~ 108 (304)
T 2ynn_A 90 ---VVDFEAHPDY-IRSIAVHPT 108 (304)
T ss_dssp ---EEEEECCSSC-EEEEEECSS
T ss_pred ---EEEEeCCCCc-EEEEEEcCC
No 193
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=40.91 E-value=2.6e+02 Score=27.18 Aligned_cols=192 Identities=7% Similarity=0.024 Sum_probs=95.7
Q ss_pred cEEEEccCC-cceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCCcEEEcccCCCcc-
Q 016891 120 GIALWNPST-EEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTNSWRRIRVDFPYY- 197 (381)
Q Consensus 120 ~~~V~NP~T-~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W~~~~~~~p~~- 197 (381)
.++++|..+ ++...+..... . ......+.+ +. +.+-++.... .......+.+++..++..+.+.......
T Consensus 264 ~l~~~d~~~~~~~~~~~~~~~-~--~~~~~~~~~-pD-g~~l~~~~~~---~~~~~~~i~~~d~~~g~~~~~~~~~~~~~ 335 (741)
T 2ecf_A 264 KLGVISPAEQAQTQWIDLGKE-Q--DIYLARVNW-RD-PQHLSFQRQS---RDQKKLDLVEVTLASNQQRVLAHETSPTW 335 (741)
T ss_dssp EEEEECSSTTCCCEEECCCSC-S--SEEEEEEEE-EE-TTEEEEEEEE---TTSSEEEEEEEETTTCCEEEEEEEECSSC
T ss_pred EEEEEECCCCCceEEecCCCC-c--ceEEEEEEe-CC-CCEEEEEEec---ccCCeEEEEEEECCCCceEEEEEcCCCCc
Confidence 788999998 88766643311 1 123334455 33 3333322221 1112367888898888776654111100
Q ss_pred eecCCCc-EEECCeeEEEEeeCCCCCCcCEEEEEECCCCeeeeecCCCCCCCCCceeEEE--EEECCe-EEEEEecCCCc
Q 016891 198 ILHGWDG-TFADGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEVPLPHLENRNDVLVMFV--GNFSGC-LYFSCLCNYPQ 273 (381)
Q Consensus 198 ~~~~~~~-v~~nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~L--~~~~G~-L~~~~~~~~~~ 273 (381)
....... ..-+|.+++.+..+. ...|..+|+.+. ...+. .... ....+ ..-+|+ |++....++..
T Consensus 336 ~~~~~~~~~spdg~~~~~~~~~g----~~~l~~~~~~~~-~~~l~--~~~~----~v~~~~~~s~dg~~l~~~~~~~~~~ 404 (741)
T 2ecf_A 336 VPLHNSLRFLDDGSILWSSERTG----FQHLYRIDSKGK-AAALT--HGNW----SVDELLAVDEKAGLAYFRAGIESAR 404 (741)
T ss_dssp CCCCSCCEECTTSCEEEEECTTS----SCEEEEECSSSC-EEESC--CSSS----CEEEEEEEETTTTEEEEEECSSCTT
T ss_pred CCcCCceEECCCCeEEEEecCCC----ccEEEEEcCCCC-eeeee--ecce----EEEeEeEEeCCCCEEEEEEeCCCCc
Confidence 0000011 123788777665432 236888887665 43332 1110 11122 233564 55555544433
Q ss_pred eEEEEEEC-CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCce
Q 016891 274 PVDIWVLM-GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGA 338 (381)
Q Consensus 274 ~~~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~ 338 (381)
.+.||.++ .. .....+.. ......+.+.++|+.|++... .......++.+|.+++..
T Consensus 405 ~~~l~~~~~~g-~~~~~l~~--~~~~~~~~~spdg~~l~~~~~-----~~~~p~~~~l~~~~~~~~ 462 (741)
T 2ecf_A 405 ESQIYAVPLQG-GQPQRLSK--APGMHSASFARNASVYVDSWS-----NNSTPPQIELFRANGEKI 462 (741)
T ss_dssp CBEEEEEETTC-CCCEECCC--SCSEEEEEECTTSSEEEEEEE-----ETTEEEEEEEEETTSCEE
T ss_pred eEEEEEEEcCC-CCeeeccc--CCCceEEEECCCCCEEEEEec-----CCCCCCeEEEEEcCCCeE
Confidence 68899987 22 12233332 122446677788886666521 111224688888766544
No 194
>1ddw_A GLGF-domain protein homer; pleckstrin homology domain fold, signaling protein; 1.70A {Rattus norvegicus} SCOP: b.55.1.4 PDB: 1ddv_A 2p8v_A 1i7a_A*
Probab=39.99 E-value=74 Score=23.66 Aligned_cols=40 Identities=20% Similarity=0.355 Sum_probs=29.0
Q ss_pred CcEEEEccCCc-ceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEE
Q 016891 119 NGIALWNPSTE-EHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLV 165 (381)
Q Consensus 119 ~~~~V~NP~T~-~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~ 165 (381)
-.+++.||.|+ .|...-.. ...+.+-+|+..+.|+|+.+.
T Consensus 11 A~V~~~D~~tk~~W~p~g~~-------~~~V~~~~d~~~~~yRIv~~~ 51 (120)
T 1ddw_A 11 AHVFQIDPNTKKNWVPTSKH-------AVTVSYFYDSTRNVYRIISLD 51 (120)
T ss_dssp EEEEEECTTTSCSEEESCSS-------CEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEEcCCCCCceEeCCCC-------ceEEEEEEcCCCCEEEEEEcc
Confidence 35788999996 98664332 145567789888889998863
No 195
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=39.09 E-value=1.7e+02 Score=24.44 Aligned_cols=196 Identities=15% Similarity=0.162 Sum_probs=88.7
Q ss_pred ccCcEEEEeeCCCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCCc
Q 016891 107 SCNGLIAFKNDENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTNS 186 (381)
Q Consensus 107 s~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~ 186 (381)
|.+|+|.+.. +..+.|||+.|++...+-.... + ......+.+.+.. .+-+ ... . ...+.+++.+++.
T Consensus 34 S~~~~lAvg~-D~tV~iWd~~tg~~~~~~~~~~-~--~~~V~~v~~~~~~-~~l~--sgs--~----Dg~v~iw~~~~~~ 100 (318)
T 4ggc_A 34 SSGNVLAVAL-DNSVYLWSASSGDILQLLQMEQ-P--GEYISSVAWIKEG-NYLA--VGT--S----SAEVQLWDVQQQK 100 (318)
T ss_dssp CTTSEEEEEE-TTEEEEEETTTCCEEEEEECCS-T--TCCEEEEEECTTS-SEEE--EEE--T----TSEEEEEETTTTE
T ss_pred CCCCEEEEEe-CCEEEEEECCCCCEEEEEEecC-C--CCeEEEEEECCCC-CEEE--EEE--C----CCcEEEeecCCce
Confidence 5677765543 5789999999998766432211 1 1123445555433 3322 211 1 1567888887764
Q ss_pred EEEcccCCCcceecCCCcEEECCeeEEEEeeCCCCCCcCEEEEEECCCCeeeeecCCCCCCCCCceeEEEEE-ECCeEEE
Q 016891 187 WRRIRVDFPYYILHGWDGTFADGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEVPLPHLENRNDVLVMFVGN-FSGCLYF 265 (381)
Q Consensus 187 W~~~~~~~p~~~~~~~~~v~~nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~-~~G~L~~ 265 (381)
-........... .....++.+-..+... ..+...+..+.......+.... .....+.. .+|.+.+
T Consensus 101 ~~~~~~~h~~~~----~~~~~~~~~l~s~~~~------~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~ 166 (318)
T 4ggc_A 101 RLRNMTSHSARV----GSLSWNSYILSSGSRS------GHIHHHDVRVAEHHVATLSGHS----QEVCGLRWAPDGRHLA 166 (318)
T ss_dssp EEEEEECCSSCE----EEEEEETTEEEEEETT------SEEEEEETTSSSCEEEEEECCS----SCEEEEEECTTSSEEE
T ss_pred eEEEecCccceE----EEeecCCCEEEEEecC------CceEeeecCCCceeEEEEcCcc----CceEEEEEcCCCCEEE
Confidence 221110111000 2223334332222222 1455555554433222111111 11222222 3566666
Q ss_pred EEecCCCceEEEEEEC---CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCce
Q 016891 266 SCLCNYPQPVDIWVLM---GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGA 338 (381)
Q Consensus 266 ~~~~~~~~~~~iW~l~---~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~ 338 (381)
....++ .+.||.+. ............. .....+...+.+..++.... + .....+.++|.++...
T Consensus 167 s~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~--~----~~~~~i~lwd~~~~~~ 233 (318)
T 4ggc_A 167 SGGNDN--LVNVWPSAPGEGGWVPLQTFTQHQ-GAVKAVAWCPWQSNVLATGG--G----TSDRHIRIWNVCSGAC 233 (318)
T ss_dssp EEETTS--CEEEEESSCBTTBSCCSEEECCCC-SCEEEEEECTTSTTEEEEEE--C----TTTCEEEEEETTTCCE
T ss_pred EEecCc--ceeEEECCCCcccccceeeecccC-CceEEEEecCCCCcEEEEEe--c----CCCCEEEEEecccccc
Confidence 666555 79999887 2222222222111 12333344443332433310 0 2334577888887777
No 196
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=38.65 E-value=1.8e+02 Score=24.54 Aligned_cols=96 Identities=20% Similarity=0.278 Sum_probs=54.7
Q ss_pred EEEEEECCCCeeeee-cCCCCCCCCCceeEEEEEE---CCeEEEEEecCCCceEEEEEEC-CceeEEEEecCCCCCeeEE
Q 016891 226 LIIAFNLKSEEFHEV-PLPHLENRNDVLVMFVGNF---SGCLYFSCLCNYPQPVDIWVLM-GCWTKTFSFPRSVGDYVKA 300 (381)
Q Consensus 226 ~i~~fD~~~e~~~~i-~~P~~~~~~~~~~~~L~~~---~G~L~~~~~~~~~~~~~iW~l~-~~W~~~~~i~~~~~~~~~~ 300 (381)
.|..+|+.+++...+ .+.. +...-..+.-. +|.+.+.+..++ .+.||.++ ..|.....+.. ......-
T Consensus 32 ~v~iw~~~~~~~~~~~~l~g----H~~~V~~v~~s~~~~g~~l~s~s~D~--~v~iWd~~~~~~~~~~~~~~-h~~~v~~ 104 (297)
T 2pm7_B 32 TIKIFEVEGETHKLIDTLTG----HEGPVWRVDWAHPKFGTILASCSYDG--KVMIWKEENGRWSQIAVHAV-HSASVNS 104 (297)
T ss_dssp CEEEEEBCSSCBCCCEEECC----CSSCEEEEEECCGGGCSEEEEEETTT--EEEEEEBSSSCBCCCEEECC-CSSCEEE
T ss_pred EEEEEecCCCCcEEEEEEcc----ccCCeEEEEecCCCcCCEEEEEcCCC--EEEEEEcCCCceEEEEEeec-CCCceeE
Confidence 688888875433222 1111 11112233322 267666666655 89999999 77877665541 1123455
Q ss_pred EEEEeC--CCEEEEEecccCCccccCCcEEEEEeCCCCc
Q 016891 301 LAYSKS--GGKVLVDKFEYGEDEDINRWELFWYDLQNQG 337 (381)
Q Consensus 301 ~~~~~~--g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~ 337 (381)
+.+.++ |..|+.. ..+..+.+||++++.
T Consensus 105 v~~~p~~~g~~l~s~---------s~d~~v~~wd~~~~~ 134 (297)
T 2pm7_B 105 VQWAPHEYGPMLLVA---------SSDGKVSVVEFKENG 134 (297)
T ss_dssp EEECCGGGCSEEEEE---------ETTSEEEEEEBCSSS
T ss_pred EEeCcCCCCcEEEEE---------ECCCcEEEEEecCCC
Confidence 666665 6634444 356679999998763
No 197
>1evh_A WH1 domain, protein (MENA EVH1 domain); molecular recognition, actin dynamics, contractIle protein; 1.80A {Mus musculus} SCOP: b.55.1.4 PDB: 2xqn_M 2iyb_A
Probab=38.63 E-value=58 Score=23.87 Aligned_cols=41 Identities=7% Similarity=0.001 Sum_probs=29.1
Q ss_pred cEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEE
Q 016891 120 GIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLV 165 (381)
Q Consensus 120 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~ 165 (381)
.+++++|.|+.|....... ....+.+..|...+.|+|+...
T Consensus 12 ~V~~~d~~~~~W~p~~~~~-----g~s~V~~~~d~~~~~yrIv~~~ 52 (112)
T 1evh_A 12 AVMVYDDANKKWVPAGGST-----GFSRVHIYHHTGNNTFRVVGRK 52 (112)
T ss_dssp EEEEEETTTTEEEEGGGCC-----SCEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEcCCCCceEECCCCC-----CceEEEEEEECCCCEEEEEEEE
Confidence 5788999999775543211 2245678889888889998874
No 198
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=38.33 E-value=1.7e+02 Score=24.36 Aligned_cols=55 Identities=24% Similarity=0.418 Sum_probs=38.0
Q ss_pred eEEEEEEC-CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCce
Q 016891 274 PVDIWVLM-GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGA 338 (381)
Q Consensus 274 ~~~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~ 338 (381)
.+.||-++ .+-.+...... ......-+++.++|+ .++.+ ..+..+.+||+++++.
T Consensus 46 tV~iWd~~tg~~~~~~~~~~-~~~~V~~v~~~~~~~-~l~sg--------s~Dg~v~iw~~~~~~~ 101 (318)
T 4ggc_A 46 SVYLWSASSGDILQLLQMEQ-PGEYISSVAWIKEGN-YLAVG--------TSSAEVQLWDVQQQKR 101 (318)
T ss_dssp EEEEEETTTCCEEEEEECCS-TTCCEEEEEECTTSS-EEEEE--------ETTSEEEEEETTTTEE
T ss_pred EEEEEECCCCCEEEEEEecC-CCCeEEEEEECCCCC-EEEEE--------ECCCcEEEeecCCcee
Confidence 79999988 65555554431 223456677788888 44442 4566799999999987
No 199
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=38.04 E-value=2e+02 Score=24.83 Aligned_cols=120 Identities=12% Similarity=0.070 Sum_probs=63.6
Q ss_pred CcEEE--CCeeEEEEeeCCCCCCcCEEEEEECCCC--eeeeecCC--CCC-CCCCceeEEEEEE--CCeEEEEEe-cCCC
Q 016891 203 DGTFA--DGHVHWLVTNNPEDYIENLIIAFNLKSE--EFHEVPLP--HLE-NRNDVLVMFVGNF--SGCLYFSCL-CNYP 272 (381)
Q Consensus 203 ~~v~~--nG~lYwl~~~~~~~~~~~~i~~fD~~~e--~~~~i~~P--~~~-~~~~~~~~~L~~~--~G~L~~~~~-~~~~ 272 (381)
.++.+ +|.+|+..... ..|..||+... ....+..+ ... ...-.....++.. +|.|+++.. ...
T Consensus 94 ~gia~d~~g~l~v~d~~~------~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~- 166 (329)
T 3fvz_A 94 HGLSIDTDGNYWVTDVAL------HQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNS- 166 (329)
T ss_dssp EEEEECTTSCEEEEETTT------TEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCC-
T ss_pred eEEEECCCCCEEEEECCC------CEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCC-
Confidence 34444 58888765443 27999998765 33333211 110 0000122345554 688998885 333
Q ss_pred ceEEEEEECCceeEEEEec-CC----CC--CeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCce
Q 016891 273 QPVDIWVLMGCWTKTFSFP-RS----VG--DYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGA 338 (381)
Q Consensus 273 ~~~~iW~l~~~W~~~~~i~-~~----~~--~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~ 338 (381)
.+.+|..+........-. .. .+ ....-+++.++++.|++.. .....|..||++++++
T Consensus 167 -~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d--------~~~~~I~~~~~~~G~~ 230 (329)
T 3fvz_A 167 -RIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVAD--------RENGRIQCFKTDTKEF 230 (329)
T ss_dssp -EEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEE--------TTTTEEEEEETTTCCE
T ss_pred -eEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEE--------CCCCEEEEEECCCCcE
Confidence 666666443332222111 10 11 2244466666644488883 3456799999996655
No 200
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=37.91 E-value=2e+02 Score=24.85 Aligned_cols=93 Identities=13% Similarity=0.197 Sum_probs=55.0
Q ss_pred EEEEEECCCCeeeee-cCCCCCCCCCceeEEEEEE-CCeEEEEEecCCCceEEEEEEC-CceeEEEEecCCCCCeeEEEE
Q 016891 226 LIIAFNLKSEEFHEV-PLPHLENRNDVLVMFVGNF-SGCLYFSCLCNYPQPVDIWVLM-GCWTKTFSFPRSVGDYVKALA 302 (381)
Q Consensus 226 ~i~~fD~~~e~~~~i-~~P~~~~~~~~~~~~L~~~-~G~L~~~~~~~~~~~~~iW~l~-~~W~~~~~i~~~~~~~~~~~~ 302 (381)
.|..+|+.+.+.... .... .....+.-. +|.+.+....++ .+.||.+. .. ....+.. ......-++
T Consensus 165 ~i~~wd~~~~~~~~~~~~h~------~~v~~~~~~~~~~~l~sg~~d~--~v~~wd~~~~~--~~~~~~~-h~~~v~~v~ 233 (340)
T 1got_B 165 TCALWDIETGQQTTTFTGHT------GDVMSLSLAPDTRLFVSGACDA--SAKLWDVREGM--CRQTFTG-HESDINAIC 233 (340)
T ss_dssp CEEEEETTTTEEEEEECCCS------SCEEEEEECTTSSEEEEEETTS--CEEEEETTTCS--EEEEECC-CSSCEEEEE
T ss_pred cEEEEECCCCcEEEEEcCCC------CceEEEEECCCCCEEEEEeCCC--cEEEEECCCCe--eEEEEcC-CcCCEEEEE
Confidence 688999988765332 2111 112233333 577777666666 79999887 32 2233331 113356677
Q ss_pred EEeCCCEEEEEecccCCccccCCcEEEEEeCCCCce
Q 016891 303 YSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGA 338 (381)
Q Consensus 303 ~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~ 338 (381)
+.++|. .++.+ ..+..+.+||+++++.
T Consensus 234 ~~p~~~-~l~s~--------s~d~~v~iwd~~~~~~ 260 (340)
T 1got_B 234 FFPNGN-AFATG--------SDDATCRLFDLRADQE 260 (340)
T ss_dssp ECTTSS-EEEEE--------ETTSCEEEEETTTTEE
T ss_pred EcCCCC-EEEEE--------cCCCcEEEEECCCCcE
Confidence 788888 44442 3456799999988765
No 201
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=35.65 E-value=3.4e+02 Score=26.93 Aligned_cols=125 Identities=11% Similarity=0.173 Sum_probs=67.6
Q ss_pred EECCeeEEEEeeCC----CCCCcCEEEEEECCC--------CeeeeecCCCCCCCCCceeEEEEEECCeEEEEEecCCCc
Q 016891 206 FADGHVHWLVTNNP----EDYIENLIIAFNLKS--------EEFHEVPLPHLENRNDVLVMFVGNFSGCLYFSCLCNYPQ 273 (381)
Q Consensus 206 ~~nG~lYwl~~~~~----~~~~~~~i~~fD~~~--------e~~~~i~~P~~~~~~~~~~~~L~~~~G~L~~~~~~~~~~ 273 (381)
+.+|.+|+....+- .......|++.|+.+ ..|+.+-.|... ..--.+...++.|++....++..
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~l~~~~~~~~~l~~~~~~~~~~ 372 (711)
T 4hvt_A 297 SFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTAN----EVFNFISTTKDRVFLATYDNVVA 372 (711)
T ss_dssp EETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTT----EEEEEEEECSSCEEEEEEETTEE
T ss_pred eECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCC----CeEEEEEEECCEEEEEEEECCEE
Confidence 56888888653220 001234799999875 367764333321 11224455577888877776643
Q ss_pred eEEEEEEC-CceeEEEEec-CCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCceeeeeE
Q 016891 274 PVDIWVLM-GCWTKTFSFP-RSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGAAADQV 343 (381)
Q Consensus 274 ~~~iW~l~-~~W~~~~~i~-~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~~~~~v 343 (381)
++.++.++ ..|.....++ +..+ .........+++.+++... .......++.||++ ++. +.+
T Consensus 373 ~l~~~~~~~g~~~~~~~i~lp~~~-~~~~~~~~~~~~~~~~~~s-----s~~~P~~~~~~d~~-~~~--~~l 435 (711)
T 4hvt_A 373 KVVTFTLENEQWTKPVVLKLPYQN-AIFGMSSYEEEEEALITIE-----NSIVPPTIYLWVKT-HEL--KII 435 (711)
T ss_dssp EEEEECEETTEECCCEEECCCSTT-CEEEEECCTTCSCEEEEEE-----CSSSCCEEEEECTT-SCE--EEE
T ss_pred EEEEEECCCCceEEEeccCCCCCe-EEEEEeecCcCCEEEEEEe-----cCCCCCEEEEEeCC-CcE--EEE
Confidence 55555554 6775432243 1112 2333333345554666521 11345679999988 666 555
No 202
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=35.21 E-value=2.1e+02 Score=24.33 Aligned_cols=107 Identities=9% Similarity=-0.082 Sum_probs=58.1
Q ss_pred ECCeeEEEEeeCCCCCCcCEEEEEECCCCeeeeecCCCCCCCCCceeEEEEEE----CCeEEEEEecCCCceEEEEEEC-
Q 016891 207 ADGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEVPLPHLENRNDVLVMFVGNF----SGCLYFSCLCNYPQPVDIWVLM- 281 (381)
Q Consensus 207 ~nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~----~G~L~~~~~~~~~~~~~iW~l~- 281 (381)
-+|.+...+..+. .|..+|+.+.+......... ....+.-. +|...++...++ .+.+|.+.
T Consensus 178 ~~~~~l~~~~~d~------~i~i~d~~~~~~~~~~~~~~------~v~~~~~~~~~~~~~~l~~~~~dg--~i~i~d~~~ 243 (357)
T 3i2n_A 178 QEERVVCAGYDNG------DIKLFDLRNMALRWETNIKN------GVCSLEFDRKDISMNKLVATSLEG--KFHVFDMRT 243 (357)
T ss_dssp -CCCEEEEEETTS------EEEEEETTTTEEEEEEECSS------CEEEEEESCSSSSCCEEEEEESTT--EEEEEEEEE
T ss_pred CCCCEEEEEccCC------eEEEEECccCceeeecCCCC------ceEEEEcCCCCCCCCEEEEECCCC--eEEEEeCcC
Confidence 3565555444432 79999999876543311111 12233333 566666665555 89999887
Q ss_pred ----CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCc
Q 016891 282 ----GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQG 337 (381)
Q Consensus 282 ----~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~ 337 (381)
...... .+.. ......-+.+.+++..+++.. ..+..+.+||+++..
T Consensus 244 ~~~~~~~~~~-~~~~-~~~~v~~~~~~~~~~~~l~~~--------~~dg~i~iwd~~~~~ 293 (357)
T 3i2n_A 244 QHPTKGFASV-SEKA-HKSTVWQVRHLPQNRELFLTA--------GGAGGLHLWKYEYPI 293 (357)
T ss_dssp EETTTEEEEE-EEEC-CSSCEEEEEEETTEEEEEEEE--------ETTSEEEEEEEECCS
T ss_pred CCcccceeee-ccCC-CcCCEEEEEECCCCCcEEEEE--------eCCCcEEEeecCCCc
Confidence 122111 1111 123455666777776344442 355679999988654
No 203
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=34.30 E-value=2.3e+02 Score=24.64 Aligned_cols=66 Identities=18% Similarity=0.333 Sum_probs=42.8
Q ss_pred CCeEEEEEecCCCce-EEEEEEC-CceeEEEEecCC-CCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCC
Q 016891 260 SGCLYFSCLCNYPQP-VDIWVLM-GCWTKTFSFPRS-VGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQ 336 (381)
Q Consensus 260 ~G~L~~~~~~~~~~~-~~iW~l~-~~W~~~~~i~~~-~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~ 336 (381)
+|++.+.+..++ . +.||.++ .+ .+..+... ......-+++.++|..|+.. ..+..+.+||+++.
T Consensus 206 ~g~~l~s~s~d~--~~v~iwd~~~~~--~~~~~~~g~h~~~v~~~~~s~~~~~l~s~---------s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 206 KSDMVATCSQDG--TIIRVFKTEDGV--LVREFRRGLDRADVVDMKWSTDGSKLAVV---------SDKWTLHVFEIFND 272 (355)
T ss_dssp TSSEEEEEETTC--SEEEEEETTTCC--EEEEEECTTCCSCEEEEEECTTSCEEEEE---------ETTCEEEEEESSCC
T ss_pred CCCEEEEEeCCC--CEEEEEECCCCc--EEEEEEcCCCCCcEEEEEECCCCCEEEEE---------ECCCEEEEEEccCC
Confidence 677777666665 6 9999988 33 33344311 12345667788888844444 35567999999877
Q ss_pred ce
Q 016891 337 GA 338 (381)
Q Consensus 337 ~~ 338 (381)
..
T Consensus 273 ~~ 274 (355)
T 3vu4_A 273 QD 274 (355)
T ss_dssp SC
T ss_pred CC
Confidence 54
No 204
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=33.81 E-value=2.4e+02 Score=24.57 Aligned_cols=182 Identities=13% Similarity=0.111 Sum_probs=90.1
Q ss_pred EEEEeeCCCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCCcEEEc
Q 016891 111 LIAFKNDENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTNSWRRI 190 (381)
Q Consensus 111 Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W~~~ 190 (381)
.|+....+..+.|||..+++....-.. + ......+.+.+....-.++... . ...+.+|+.+++.....
T Consensus 168 ~l~t~s~D~~v~lwd~~~~~~~~~~~~---h--~~~v~~~~~~~~~~g~~l~sgs---~----Dg~v~~wd~~~~~~~~~ 235 (354)
T 2pbi_B 168 QILTASGDGTCALWDVESGQLLQSFHG---H--GADVLCLDLAPSETGNTFVSGG---C----DKKAMVWDMRSGQCVQA 235 (354)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEEC---C--SSCEEEEEECCCSSCCEEEEEE---T----TSCEEEEETTTCCEEEE
T ss_pred EEEEEeCCCcEEEEeCCCCeEEEEEcC---C--CCCeEEEEEEeCCCCCEEEEEe---C----CCeEEEEECCCCcEEEE
Confidence 344344567889999988775432111 1 1123334444432222222221 1 14678888887754322
Q ss_pred ccCCCcceecCCCcEEE--CCeeEEEEeeCCCCCCcCEEEEEECCCCeeeee-cCCCCCCCCCceeEEEEE-ECCeEEEE
Q 016891 191 RVDFPYYILHGWDGTFA--DGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEV-PLPHLENRNDVLVMFVGN-FSGCLYFS 266 (381)
Q Consensus 191 ~~~~p~~~~~~~~~v~~--nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~~~L~~-~~G~L~~~ 266 (381)
-....... .++.+ +|.....+..+. .|-.+|+.+.+-..+ ...... .....+.- .+|.+.++
T Consensus 236 ~~~h~~~v----~~v~~~p~~~~l~s~s~D~------~v~lwd~~~~~~~~~~~~~~~~----~~~~~~~~s~~g~~l~~ 301 (354)
T 2pbi_B 236 FETHESDV----NSVRYYPSGDAFASGSDDA------TCRLYDLRADREVAIYSKESII----FGASSVDFSLSGRLLFA 301 (354)
T ss_dssp ECCCSSCE----EEEEECTTSSEEEEEETTS------CEEEEETTTTEEEEEECCTTCC----SCEEEEEECTTSSEEEE
T ss_pred ecCCCCCe----EEEEEeCCCCEEEEEeCCC------eEEEEECCCCcEEEEEcCCCcc----cceeEEEEeCCCCEEEE
Confidence 10111111 23333 455444444332 688999987654332 221111 01112322 36777777
Q ss_pred EecCCCceEEEEEEC-CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEe
Q 016891 267 CLCNYPQPVDIWVLM-GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYD 332 (381)
Q Consensus 267 ~~~~~~~~~~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd 332 (381)
...++ .+.||.+. .+ .+..+.. ......-+++.++|..|+-. ..+..+.+||
T Consensus 302 g~~d~--~i~vwd~~~~~--~~~~l~~-h~~~v~~l~~spdg~~l~sg---------s~D~~v~vW~ 354 (354)
T 2pbi_B 302 GYNDY--TINVWDVLKGS--RVSILFG-HENRVSTLRVSPDGTAFCSG---------SWDHTLRVWA 354 (354)
T ss_dssp EETTS--CEEEEETTTCS--EEEEECC-CSSCEEEEEECTTSSCEEEE---------ETTSEEEEEC
T ss_pred EECCC--cEEEEECCCCc--eEEEEEC-CCCcEEEEEECCCCCEEEEE---------cCCCCEEecC
Confidence 77665 79999886 32 2333331 11345667778888844444 3455677664
No 205
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=33.74 E-value=2.7e+02 Score=27.20 Aligned_cols=30 Identities=23% Similarity=0.233 Sum_probs=23.9
Q ss_pred CcEEECCeeEEEEeeCCCCCCcCEEEEEECCC--Ceeee
Q 016891 203 DGTFADGHVHWLVTNNPEDYIENLIIAFNLKS--EEFHE 239 (381)
Q Consensus 203 ~~v~~nG~lYwl~~~~~~~~~~~~i~~fD~~~--e~~~~ 239 (381)
.+++.+|.+|...... .|.++|..+ +.|+.
T Consensus 61 ~P~v~~g~vyv~~~~~-------~v~AlD~~tG~~~W~~ 92 (668)
T 1kv9_A 61 TPLFHDGVIYTSMSWS-------RVIAVDAASGKELWRY 92 (668)
T ss_dssp CCEEETTEEEEEEGGG-------EEEEEETTTCCEEEEE
T ss_pred CCEEECCEEEEECCCC-------eEEEEECCCChhceEE
Confidence 6788999999987655 799999865 56664
No 206
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=33.40 E-value=1.6e+02 Score=28.27 Aligned_cols=30 Identities=13% Similarity=0.022 Sum_probs=22.9
Q ss_pred CcEEECCeeEEEEe-eCCCCCCcCEEEEEEC-CC--Ceeee
Q 016891 203 DGTFADGHVHWLVT-NNPEDYIENLIIAFNL-KS--EEFHE 239 (381)
Q Consensus 203 ~~v~~nG~lYwl~~-~~~~~~~~~~i~~fD~-~~--e~~~~ 239 (381)
.+++.+|.+|.... .. .|.++|. .+ +.|+.
T Consensus 57 ~P~v~~g~vyv~~~~~~-------~v~AlD~~~tG~~~W~~ 90 (571)
T 2ad6_A 57 APLVIGDMMYVHSAFPN-------NTYALNLNDPGKIVWQH 90 (571)
T ss_dssp CCEEETTEEEEECSTTT-------CEEEEETTCTTSEEEEE
T ss_pred ccEEECCEEEEEeCCCC-------EEEEEeCCCCccEEEEE
Confidence 67889999999776 33 6999998 54 46664
No 207
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=32.13 E-value=2.3e+02 Score=23.82 Aligned_cols=185 Identities=12% Similarity=0.139 Sum_probs=88.2
Q ss_pred EEEEeeCCCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCCcEEE-
Q 016891 111 LIAFKNDENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTNSWRR- 189 (381)
Q Consensus 111 Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W~~- 189 (381)
+|+....+..+.|||..+++....-.. + ......+.+.+... + + .... . ...+.+|+.+++.-..
T Consensus 79 ~l~s~~~d~~i~vwd~~~~~~~~~~~~---~--~~~v~~~~~~~~~~-~-l-~s~~--~----d~~i~iwd~~~~~~~~~ 144 (312)
T 4ery_A 79 LLVSASDDKTLKIWDVSSGKCLKTLKG---H--SNYVFCCNFNPQSN-L-I-VSGS--F----DESVRIWDVKTGKCLKT 144 (312)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEEC---C--SSCEEEEEECSSSS-E-E-EEEE--T----TSCEEEEETTTCCEEEE
T ss_pred EEEEECCCCEEEEEECCCCcEEEEEcC---C--CCCEEEEEEcCCCC-E-E-EEEe--C----CCcEEEEECCCCEEEEE
Confidence 333344567789999888765432111 1 11233444554322 2 2 2211 1 1457788887764321
Q ss_pred cccCCCcceecCCCcEEE--CCeeEEEEeeCCCCCCcCEEEEEECCCCeeee-ecCCCCCCCCCceeEEEEEE-CCeEEE
Q 016891 190 IRVDFPYYILHGWDGTFA--DGHVHWLVTNNPEDYIENLIIAFNLKSEEFHE-VPLPHLENRNDVLVMFVGNF-SGCLYF 265 (381)
Q Consensus 190 ~~~~~p~~~~~~~~~v~~--nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~-i~~P~~~~~~~~~~~~L~~~-~G~L~~ 265 (381)
+. ...... ..+.+ +|.+...+..+. .|..+|+.+.+... +...... ....+.-. +|...+
T Consensus 145 ~~-~~~~~v----~~~~~~~~~~~l~~~~~d~------~i~~wd~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~ 208 (312)
T 4ery_A 145 LP-AHSDPV----SAVHFNRDGSLIVSSSYDG------LCRIWDTASGQCLKTLIDDDNP-----PVSFVKFSPNGKYIL 208 (312)
T ss_dssp EC-CCSSCE----EEEEECTTSSEEEEEETTS------CEEEEETTTCCEEEEECCSSCC-----CEEEEEECTTSSEEE
T ss_pred ec-CCCCcE----EEEEEcCCCCEEEEEeCCC------cEEEEECCCCceeeEEeccCCC-----ceEEEEECCCCCEEE
Confidence 11 111001 22222 455444443332 68999998765432 2211111 11123222 566666
Q ss_pred EEecCCCceEEEEEEC-CceeEEEEec-C-CCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCce
Q 016891 266 SCLCNYPQPVDIWVLM-GCWTKTFSFP-R-SVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGA 338 (381)
Q Consensus 266 ~~~~~~~~~~~iW~l~-~~W~~~~~i~-~-~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~ 338 (381)
+...++ .+.||.+. .. ....+. . .............++. .++.+ ..+..+.+||+++++.
T Consensus 209 ~~~~d~--~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sg--------~~dg~i~vwd~~~~~~ 271 (312)
T 4ery_A 209 AATLDN--TLKLWDYSKGK--CLKTYTGHKNEKYCIFANFSVTGGK-WIVSG--------SEDNLVYIWNLQTKEI 271 (312)
T ss_dssp EEETTT--EEEEEETTTTE--EEEEECSSCCSSSCCCEEEECSSSC-EEEEC--------CTTSCEEEEETTTCCE
T ss_pred EEcCCC--eEEEEECCCCc--EEEEEEecCCceEEEEEEEEeCCCc-EEEEE--------CCCCEEEEEECCCchh
Confidence 665555 89999988 33 222232 1 1111111122223555 55552 3456799999999887
No 208
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=31.83 E-value=2.4e+02 Score=24.10 Aligned_cols=178 Identities=8% Similarity=0.054 Sum_probs=89.8
Q ss_pred eCCCcEEEEccCCcceee-CCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCCcEEEcccCC
Q 016891 116 NDENGIALWNPSTEEHLI-LPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTNSWRRIRVDF 194 (381)
Q Consensus 116 ~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W~~~~~~~ 194 (381)
..+..+.|||..+++... +...+. ....+.+.|.. .+- +... ....+.+|+.+++.-...-...
T Consensus 99 s~D~~i~lWd~~~~~~~~~~~~~~~------~~~~~~~spdg-~~l--~~g~------~dg~v~i~~~~~~~~~~~~~~~ 163 (321)
T 3ow8_A 99 SLDAHIRLWDLENGKQIKSIDAGPV------DAWTLAFSPDS-QYL--ATGT------HVGKVNIFGVESGKKEYSLDTR 163 (321)
T ss_dssp ETTSEEEEEETTTTEEEEEEECCTT------CCCCEEECTTS-SEE--EEEC------TTSEEEEEETTTCSEEEEEECS
T ss_pred eCCCcEEEEECCCCCEEEEEeCCCc------cEEEEEECCCC-CEE--EEEc------CCCcEEEEEcCCCceeEEecCC
Confidence 356788999998876544 221111 11123344432 222 1211 1146778887765432111010
Q ss_pred CcceecCCCcEEE--CCeeEEEEeeCCCCCCcCEEEEEECCCCeeee-ecCCCCCCCCCceeEEEEEE-CCeEEEEEecC
Q 016891 195 PYYILHGWDGTFA--DGHVHWLVTNNPEDYIENLIIAFNLKSEEFHE-VPLPHLENRNDVLVMFVGNF-SGCLYFSCLCN 270 (381)
Q Consensus 195 p~~~~~~~~~v~~--nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~-i~~P~~~~~~~~~~~~L~~~-~G~L~~~~~~~ 270 (381)
.... ..+.+ +|..-..+..+. .|..+|+.+.+... +...... -..+.-. +|.+.+....+
T Consensus 164 ~~~v----~~~~~spdg~~lasg~~dg------~i~iwd~~~~~~~~~~~~h~~~------v~~l~~spd~~~l~s~s~d 227 (321)
T 3ow8_A 164 GKFI----LSIAYSPDGKYLASGAIDG------IINIFDIATGKLLHTLEGHAMP------IRSLTFSPDSQLLVTASDD 227 (321)
T ss_dssp SSCE----EEEEECTTSSEEEEEETTS------CEEEEETTTTEEEEEECCCSSC------CCEEEECTTSCEEEEECTT
T ss_pred CceE----EEEEECCCCCEEEEEcCCC------eEEEEECCCCcEEEEEcccCCc------eeEEEEcCCCCEEEEEcCC
Confidence 0000 11221 455444333332 68899998775432 2221111 1123333 56766666555
Q ss_pred CCceEEEEEEC-CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCce
Q 016891 271 YPQPVDIWVLM-GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGA 338 (381)
Q Consensus 271 ~~~~~~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~ 338 (381)
+ .+.||.++ ..- ...+.. ......-+++.++|..|+.. ..+..+.+||+++++.
T Consensus 228 g--~i~iwd~~~~~~--~~~~~~-h~~~v~~~~~sp~~~~l~s~---------s~D~~v~iwd~~~~~~ 282 (321)
T 3ow8_A 228 G--YIKIYDVQHANL--AGTLSG-HASWVLNVAFCPDDTHFVSS---------SSDKSVKVWDVGTRTC 282 (321)
T ss_dssp S--CEEEEETTTCCE--EEEECC-CSSCEEEEEECTTSSEEEEE---------ETTSCEEEEETTTTEE
T ss_pred C--eEEEEECCCcce--eEEEcC-CCCceEEEEECCCCCEEEEE---------eCCCcEEEEeCCCCEE
Confidence 5 79999988 332 233331 11235566777888844444 3556799999998877
No 209
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=31.72 E-value=2.7e+02 Score=24.65 Aligned_cols=104 Identities=12% Similarity=0.046 Sum_probs=55.1
Q ss_pred EEEEEECCCCee-----eeecCCCCCCCCC------ceeEEEEEE-CCeEEEEEecCCCceEEEEEEC--CceeEEEEec
Q 016891 226 LIIAFNLKSEEF-----HEVPLPHLENRND------VLVMFVGNF-SGCLYFSCLCNYPQPVDIWVLM--GCWTKTFSFP 291 (381)
Q Consensus 226 ~i~~fD~~~e~~-----~~i~~P~~~~~~~------~~~~~L~~~-~G~L~~~~~~~~~~~~~iW~l~--~~W~~~~~i~ 291 (381)
.|..+|+.+.+. ..+..+....... .....+.-. +|++.+.... + .+.||.+. ..-.......
T Consensus 250 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~--~v~iwd~~~~~~~~~~~~~~ 326 (447)
T 3dw8_B 250 TIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-L--SVKVWDLNMENRPVETYQVH 326 (447)
T ss_dssp CEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-S--EEEEEETTCCSSCSCCEESC
T ss_pred eEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-C--eEEEEeCCCCccccceeecc
Confidence 699999987663 4443332100000 012233333 5777666555 3 89999987 2212122111
Q ss_pred CC-CC-----------CeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCceeeeeE
Q 016891 292 RS-VG-----------DYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGAAADQV 343 (381)
Q Consensus 292 ~~-~~-----------~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~~~~~v 343 (381)
.. .. ....-+++.++|..|+.. ..+..|.+||+++++. ..+
T Consensus 327 ~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~---------s~dg~v~iwd~~~~~~--~~~ 379 (447)
T 3dw8_B 327 EYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTG---------SYNNFFRMFDRNTKRD--ITL 379 (447)
T ss_dssp GGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEE---------CSTTEEEEEETTTCCE--EEE
T ss_pred ccccccccccccccccccceEEEECCCCCEEEEe---------ccCCEEEEEEcCCCcc--eee
Confidence 10 00 001126777888855444 4567899999999988 655
No 210
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=31.66 E-value=2.3e+02 Score=23.71 Aligned_cols=141 Identities=13% Similarity=0.098 Sum_probs=71.0
Q ss_pred eEEEEEEcCCCcEEEcccCCCcceecCC-CcEEE--C-CeeEEEEeeCCCCCCcCEEEEEECCCCeeeee-c-CCCCCCC
Q 016891 175 TEIAVYSLRTNSWRRIRVDFPYYILHGW-DGTFA--D-GHVHWLVTNNPEDYIENLIIAFNLKSEEFHEV-P-LPHLENR 248 (381)
Q Consensus 175 ~~~~vyss~t~~W~~~~~~~p~~~~~~~-~~v~~--n-G~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i-~-~P~~~~~ 248 (381)
..+.+|+..++.++.+. .......... .++.+ + |.+|+..... .|..+|.. .+...+ . .+.....
T Consensus 46 ~~i~~~d~~~g~~~~~~-~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~-------~l~~~d~~-g~~~~~~~~~~~~~~~ 116 (314)
T 1pjx_A 46 GEILRIDLKTGKKTVIC-KPEVNGYGGIPAGCQCDRDANQLFVADMRL-------GLLVVQTD-GTFEEIAKKDSEGRRM 116 (314)
T ss_dssp CEEEEECTTTCCEEEEE-CCEETTEECCEEEEEECSSSSEEEEEETTT-------EEEEEETT-SCEEECCSBCTTSCBC
T ss_pred CEEEEEeCCCCcEEEEE-ecccCCCCCCCceEEEecCCCcEEEEECCC-------CEEEEeCC-CCEEEEEeccCCCccc
Confidence 45777777777776554 2000000011 34444 4 7777655432 68999998 666544 2 1111100
Q ss_pred CCceeEEEEE-ECCeEEEEEecCC-----------CceEEEEEEC--CceeEEEEecCCCCCeeEEEEEE----eCCCEE
Q 016891 249 NDVLVMFVGN-FSGCLYFSCLCNY-----------PQPVDIWVLM--GCWTKTFSFPRSVGDYVKALAYS----KSGGKV 310 (381)
Q Consensus 249 ~~~~~~~L~~-~~G~L~~~~~~~~-----------~~~~~iW~l~--~~W~~~~~i~~~~~~~~~~~~~~----~~g~~i 310 (381)
.....+.. -+|+|++...... .....||.++ .+..... .. . ....-+++. ++|+.|
T Consensus 117 --~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~--~~-~-~~~~~i~~~~~~d~dg~~l 190 (314)
T 1pjx_A 117 --QGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDGQMIQVD--TA-F-QFPNGIAVRHMNDGRPYQL 190 (314)
T ss_dssp --BCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTSCEEEEE--EE-E-SSEEEEEEEECTTSCEEEE
T ss_pred --cCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCCCCEEEec--cC-C-CCcceEEEecccCCCCCEE
Confidence 01123443 3688888775431 1125678777 3322211 10 0 123445566 667556
Q ss_pred EEEecccCCccccCCcEEEEEeCC-CCce
Q 016891 311 LVDKFEYGEDEDINRWELFWYDLQ-NQGA 338 (381)
Q Consensus 311 ~l~~~~~~~~~~~~~~~l~~yd~~-t~~~ 338 (381)
++.. .....+..||++ ++++
T Consensus 191 ~v~~--------~~~~~i~~~~~~~~g~~ 211 (314)
T 1pjx_A 191 IVAE--------TPTKKLWSYDIKGPAKI 211 (314)
T ss_dssp EEEE--------TTTTEEEEEEEEETTEE
T ss_pred EEEE--------CCCCeEEEEECCCCCcc
Confidence 6662 234679999876 4544
No 211
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=31.22 E-value=2.7e+02 Score=24.40 Aligned_cols=139 Identities=6% Similarity=-0.043 Sum_probs=69.0
Q ss_pred eEEEEEEcCCCcEEEcccCCCcceecCCCcEEE--CCeeEEEEeeCCCCCCcCEEEEEECCCCeeeeecCCCCCCCCCce
Q 016891 175 TEIAVYSLRTNSWRRIRVDFPYYILHGWDGTFA--DGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEVPLPHLENRNDVL 252 (381)
Q Consensus 175 ~~~~vyss~t~~W~~~~~~~p~~~~~~~~~v~~--nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~ 252 (381)
..+.+++.+++.-.... ...... ..+.+ +|.+...+.++ .+..++..+............. ..
T Consensus 157 ~~i~iwd~~~~~~~~~~-~~~~~V----~~v~fspdg~~l~s~s~~-------~~~~~~~~~~~~~~~~~~~~~~---~~ 221 (365)
T 4h5i_A 157 AIMRIIDPSDLTEKFEI-ETRGEV----KDLHFSTDGKVVAYITGS-------SLEVISTVTGSCIARKTDFDKN---WS 221 (365)
T ss_dssp CEEEEEETTTTEEEEEE-ECSSCC----CEEEECTTSSEEEEECSS-------CEEEEETTTCCEEEEECCCCTT---EE
T ss_pred CEEEEeECCCCcEEEEe-CCCCce----EEEEEccCCceEEeccce-------eEEEEEeccCcceeeeecCCCC---CC
Confidence 46777887776543322 111101 22332 45544433332 5777787766543332211111 11
Q ss_pred eEEEE-EECCeEEEEEecCCCce--EEEEEEC-CceeE--EEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCc
Q 016891 253 VMFVG-NFSGCLYFSCLCNYPQP--VDIWVLM-GCWTK--TFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRW 326 (381)
Q Consensus 253 ~~~L~-~~~G~L~~~~~~~~~~~--~~iW~l~-~~W~~--~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~ 326 (381)
...+. .-+|++.+....+.... +.+|.+. ..+.. ...+.. ......-+++.++|.+|... ..+.
T Consensus 222 v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~V~~~~~Spdg~~lasg---------s~D~ 291 (365)
T 4h5i_A 222 LSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTN-RFKGITSMDVDMKGELAVLA---------SNDN 291 (365)
T ss_dssp EEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEES-SCSCEEEEEECTTSCEEEEE---------ETTS
T ss_pred EEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecC-CCCCeEeEEECCCCCceEEE---------cCCC
Confidence 11222 34777766665543323 4445444 33222 223321 11335667888899844444 3556
Q ss_pred EEEEEeCCCCce
Q 016891 327 ELFWYDLQNQGA 338 (381)
Q Consensus 327 ~l~~yd~~t~~~ 338 (381)
.|.+||+++.+.
T Consensus 292 ~V~iwd~~~~~~ 303 (365)
T 4h5i_A 292 SIALVKLKDLSM 303 (365)
T ss_dssp CEEEEETTTTEE
T ss_pred EEEEEECCCCcE
Confidence 799999999876
No 212
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=30.87 E-value=2.5e+02 Score=23.88 Aligned_cols=95 Identities=18% Similarity=0.212 Sum_probs=54.4
Q ss_pred EEEEEECCCCeeeee-cCCCCCCCCCceeEEEEEE---CCeEEEEEecCCCceEEEEEEC-CceeEEEEecCCCCCeeEE
Q 016891 226 LIIAFNLKSEEFHEV-PLPHLENRNDVLVMFVGNF---SGCLYFSCLCNYPQPVDIWVLM-GCWTKTFSFPRSVGDYVKA 300 (381)
Q Consensus 226 ~i~~fD~~~e~~~~i-~~P~~~~~~~~~~~~L~~~---~G~L~~~~~~~~~~~~~iW~l~-~~W~~~~~i~~~~~~~~~~ 300 (381)
.|-.+|+.+.....+ .+.... ..-..+.-. +|.+.+.+..++ .+.||.++ ..|.....+.... ....-
T Consensus 36 ~v~lwd~~~~~~~~~~~l~gH~----~~V~~v~~~~~~~~~~l~s~s~D~--~v~iWd~~~~~~~~~~~~~~h~-~~V~~ 108 (316)
T 3bg1_A 36 SVKIFDVRNGGQILIADLRGHE----GPVWQVAWAHPMYGNILASCSYDR--KVIIWREENGTWEKSHEHAGHD-SSVNS 108 (316)
T ss_dssp EEEEEEEETTEEEEEEEEECCS----SCEEEEEECCGGGSSCEEEEETTS--CEEEECCSSSCCCEEEEECCCS-SCCCE
T ss_pred eEEEEEecCCCcEEEEEEcCCC----ccEEEEEeCCCCCCCEEEEEECCC--EEEEEECCCCcceEEEEccCCC-CceEE
Confidence 788888877653322 221111 112223322 266666666555 79999998 7788777665111 22445
Q ss_pred EEEEeC--CCEEEEEecccCCccccCCcEEEEEeCCCC
Q 016891 301 LAYSKS--GGKVLVDKFEYGEDEDINRWELFWYDLQNQ 336 (381)
Q Consensus 301 ~~~~~~--g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~ 336 (381)
+++.++ |. +++.. ..+..+.+||++++
T Consensus 109 v~~~p~~~g~-~lasg--------s~D~~i~lwd~~~~ 137 (316)
T 3bg1_A 109 VCWAPHDYGL-ILACG--------SSDGAISLLTYTGE 137 (316)
T ss_dssp EEECCTTTCS-CEEEE--------CSSSCEEEEEECSS
T ss_pred EEECCCCCCc-EEEEE--------cCCCCEEEEecCCC
Confidence 666665 55 44442 34556889998876
No 213
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=30.79 E-value=3.9e+02 Score=26.13 Aligned_cols=31 Identities=19% Similarity=0.204 Sum_probs=22.1
Q ss_pred CcEEECCeeEEEEeeCCCCCCcCEEEEEECCC--Ceeeee
Q 016891 203 DGTFADGHVHWLVTNNPEDYIENLIIAFNLKS--EEFHEV 240 (381)
Q Consensus 203 ~~v~~nG~lYwl~~~~~~~~~~~~i~~fD~~~--e~~~~i 240 (381)
..++.+|.+|....++ .|.++|..+ ..|+.-
T Consensus 123 ~~a~~~~~v~v~~~dg-------~l~alD~~tG~~~W~~~ 155 (677)
T 1kb0_A 123 GVALWKGKVYVGAWDG-------RLIALDAATGKEVWHQN 155 (677)
T ss_dssp CCEEETTEEEEECTTS-------EEEEEETTTCCEEEEEE
T ss_pred CceEECCEEEEEcCCC-------EEEEEECCCCCEEeeec
Confidence 4567889999875544 799999865 456543
No 214
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=30.34 E-value=2.7e+02 Score=24.15 Aligned_cols=157 Identities=8% Similarity=-0.076 Sum_probs=78.5
Q ss_pred eEEEEEEcCCCcEEEcccCCCcceecCCCcEEE---CCeeEEEEeeCCCCCCcCEEEEEECCCCeeeee-cCCCCCCCCC
Q 016891 175 TEIAVYSLRTNSWRRIRVDFPYYILHGWDGTFA---DGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEV-PLPHLENRND 250 (381)
Q Consensus 175 ~~~~vyss~t~~W~~~~~~~p~~~~~~~~~v~~---nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~ 250 (381)
..+++++..+..=+.+. ... .... .++.+ +|.|||...... ..|..+|+....-+.+ .. ...
T Consensus 101 ~~I~~~~~dG~~~~~l~-~~~--~~~P-~giavdp~~g~ly~td~~~~-----~~I~r~~~dG~~~~~~~~~--~l~--- 166 (318)
T 3sov_A 101 NRIEVSNLDGSLRKVLF-WQE--LDQP-RAIALDPSSGFMYWTDWGEV-----PKIERAGMDGSSRFIIINS--EIY--- 166 (318)
T ss_dssp TEEEEEETTSCSCEEEE-CSS--CSSE-EEEEEEGGGTEEEEEECSSS-----CEEEEEETTSCSCEEEECS--SCS---
T ss_pred CEEEEEECCCCcEEEEE-eCC--CCCc-cEEEEeCCCCEEEEEecCCC-----CEEEEEEcCCCCeEEEEEC--CCC---
Confidence 45677776654322222 100 0001 45554 489999874321 2799999875433332 21 111
Q ss_pred ceeEEEEEE--CCeEEEEEecCCCceEEEEEECCceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEE
Q 016891 251 VLVMFVGNF--SGCLYFSCLCNYPQPVDIWVLMGCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWEL 328 (381)
Q Consensus 251 ~~~~~L~~~--~G~L~~~~~~~~~~~~~iW~l~~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l 328 (381)
..-.|+.. +|+||++..... .+....++.+-.++. +.. ....|.++.-+++.||+.. .....|
T Consensus 167 -~Pnglavd~~~~~lY~aD~~~~--~I~~~d~dG~~~~~~-~~~---~~~~P~glav~~~~lywtd--------~~~~~V 231 (318)
T 3sov_A 167 -WPNGLTLDYEEQKLYWADAKLN--FIHKSNLDGTNRQAV-VKG---SLPHPFALTLFEDILYWTD--------WSTHSI 231 (318)
T ss_dssp -CEEEEEEETTTTEEEEEETTTT--EEEEEETTSCSCEEE-ECS---CCSCEEEEEEETTEEEEEE--------TTTTEE
T ss_pred -CccEEEEeccCCEEEEEECCCC--EEEEEcCCCCceEEE-ecC---CCCCceEEEEeCCEEEEEe--------cCCCeE
Confidence 11234433 688998876543 444444442211111 111 2235555555556688883 345689
Q ss_pred EEEeCCCCceeeeeEEEecCCCCceeEEEEeecee
Q 016891 329 FWYDLQNQGAAADQVTIHGVPQGCRDTIVCVDSLV 363 (381)
Q Consensus 329 ~~yd~~t~~~~~~~v~~~~~~~~~~~~~~y~~sl~ 363 (381)
..+|+.+++.. +.|.. +.... +.+.+|.++..
T Consensus 232 ~~~~~~~G~~~-~~i~~-~~~~P-~~i~v~~~~~q 263 (318)
T 3sov_A 232 LACNKYTGEGL-REIHS-DIFSP-MDIHAFSQQRQ 263 (318)
T ss_dssp EEEETTTCCSC-EEEEC-CCSSC-CCEEEECGGGS
T ss_pred EEEECCCCCce-EEEeC-CCCCC-cEEEEeccccc
Confidence 99999766650 34422 22222 34556655543
No 215
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=29.82 E-value=3e+02 Score=24.47 Aligned_cols=96 Identities=14% Similarity=0.180 Sum_probs=53.0
Q ss_pred EEEEEECCCCee-eeecCCCCCCCCCceeEEEEEE-CCeEEEEEecCCCceEEEEEEC-CceeEEEEecCCCCCeeEEEE
Q 016891 226 LIIAFNLKSEEF-HEVPLPHLENRNDVLVMFVGNF-SGCLYFSCLCNYPQPVDIWVLM-GCWTKTFSFPRSVGDYVKALA 302 (381)
Q Consensus 226 ~i~~fD~~~e~~-~~i~~P~~~~~~~~~~~~L~~~-~G~L~~~~~~~~~~~~~iW~l~-~~W~~~~~i~~~~~~~~~~~~ 302 (381)
.|..+|+.+.+. ..+..|.... ....+.-. +|.+.+....++ .+.||.++ ..-.....+.. .....-+.
T Consensus 193 ~i~iwd~~~~~~~~~~~~~~h~~----~v~~~~~s~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~--~~~v~~~~ 264 (437)
T 3gre_A 193 RVIIFDIRTLERLQIIENSPRHG----AVSSICIDEECCVLILGTTRG--IIDIWDIRFNVLIRSWSFGD--HAPITHVE 264 (437)
T ss_dssp EEEEEETTTCCEEEEEECCGGGC----CEEEEEECTTSCEEEEEETTS--CEEEEETTTTEEEEEEBCTT--CEEEEEEE
T ss_pred eEEEEeCCCCeeeEEEccCCCCC----ceEEEEECCCCCEEEEEcCCC--eEEEEEcCCccEEEEEecCC--CCceEEEE
Confidence 799999987654 3334432211 12233333 577777776665 79999988 43333322221 11122232
Q ss_pred EE----eCCCEEEEEecccCCccccCCcEEEEEeCCCCce
Q 016891 303 YS----KSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGA 338 (381)
Q Consensus 303 ~~----~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~ 338 (381)
+. +++. +++.+ ..+..+.+||+++++.
T Consensus 265 ~~~~~s~~~~-~l~s~--------~~dg~i~iwd~~~~~~ 295 (437)
T 3gre_A 265 VCQFYGKNSV-IVVGG--------SSKTFLTIWNFVKGHC 295 (437)
T ss_dssp ECTTTCTTEE-EEEEE--------STTEEEEEEETTTTEE
T ss_pred eccccCCCcc-EEEEE--------cCCCcEEEEEcCCCcE
Confidence 22 2454 45552 4556799999998886
No 216
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=29.77 E-value=2.6e+02 Score=23.75 Aligned_cols=181 Identities=7% Similarity=-0.025 Sum_probs=85.2
Q ss_pred EEEEeeCCCcEEEEccCC-ccee--eCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCCcE
Q 016891 111 LIAFKNDENGIALWNPST-EEHL--ILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTNSW 187 (381)
Q Consensus 111 Ll~~~~~~~~~~V~NP~T-~~~~--~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W 187 (381)
+|+....+..+.|||..+ ++.. .+.. + ......+.+.+ .+.+-+ ... . ...+.+|+.+++.-
T Consensus 56 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~----h--~~~v~~~~~~~-~~~~l~--s~~--~----dg~v~iwd~~~~~~ 120 (368)
T 3mmy_A 56 FLIAGSWANDVRCWEVQDSGQTIPKAQQM----H--TGPVLDVCWSD-DGSKVF--TAS--C----DKTAKMWDLSSNQA 120 (368)
T ss_dssp EEEEEETTSEEEEEEECTTSCEEEEEEEE----C--SSCEEEEEECT-TSSEEE--EEE--T----TSEEEEEETTTTEE
T ss_pred EEEEECCCCcEEEEEcCCCCceeEEEecc----c--cCCEEEEEECc-CCCEEE--EEc--C----CCcEEEEEcCCCCc
Confidence 334444567789999877 3332 1211 1 11233455555 233322 211 1 15688889888765
Q ss_pred EEcccCCCcceecCCCcEEE----CCeeEEEEeeCCCCCCcCEEEEEECCCCee-eeecCCCCCCCCCceeEEEEEECCe
Q 016891 188 RRIRVDFPYYILHGWDGTFA----DGHVHWLVTNNPEDYIENLIIAFNLKSEEF-HEVPLPHLENRNDVLVMFVGNFSGC 262 (381)
Q Consensus 188 ~~~~~~~p~~~~~~~~~v~~----nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~-~~i~~P~~~~~~~~~~~~L~~~~G~ 262 (381)
.... ...... ..+.+ +|.+...+..+. .|..+|+.+.+. ..+..+.. ...+......
T Consensus 121 ~~~~-~~~~~v----~~~~~~~~~~~~~l~~~~~dg------~i~vwd~~~~~~~~~~~~~~~-------~~~~~~~~~~ 182 (368)
T 3mmy_A 121 IQIA-QHDAPV----KTIHWIKAPNYSCVMTGSWDK------TLKFWDTRSSNPMMVLQLPER-------CYCADVIYPM 182 (368)
T ss_dssp EEEE-ECSSCE----EEEEEEECSSCEEEEEEETTS------EEEEECSSCSSCSEEEECSSC-------EEEEEEETTE
T ss_pred eeec-cccCce----EEEEEEeCCCCCEEEEccCCC------cEEEEECCCCcEEEEEecCCC-------ceEEEecCCe
Confidence 4433 111111 33333 444333333332 799999876543 33333321 2233333443
Q ss_pred EEEEEecCCCceEEEEEECCceeEEEEecCCCCCeeEEEEEEeCCCE----EEEEecccCCccccCCcEEEEEeCCCC
Q 016891 263 LYFSCLCNYPQPVDIWVLMGCWTKTFSFPRSVGDYVKALAYSKSGGK----VLVDKFEYGEDEDINRWELFWYDLQNQ 336 (381)
Q Consensus 263 L~~~~~~~~~~~~~iW~l~~~W~~~~~i~~~~~~~~~~~~~~~~g~~----i~l~~~~~~~~~~~~~~~l~~yd~~t~ 336 (381)
.++...++ .+.+|.++..=.....+..........+.+..++.. ++.. .....+.+||+++.
T Consensus 183 -~~~~~~~~--~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~dg~i~i~~~~~~ 248 (368)
T 3mmy_A 183 -AVVATAER--GLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALG---------SIEGRVAIHYINPP 248 (368)
T ss_dssp -EEEEEGGG--CEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEE---------ETTSEEEEEESSCS
T ss_pred -eEEEeCCC--cEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEe---------cCCCcEEEEecCCC
Confidence 33444444 688998882111222222112233444444443321 3333 34566888888776
No 217
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=28.91 E-value=3.5e+02 Score=25.05 Aligned_cols=96 Identities=13% Similarity=0.076 Sum_probs=54.6
Q ss_pred EEEEEECCCCeeeeecCCCCCCCCCceeEEEEEE-CCeEEEEEecCCCceEEEEEECCceeEEEEecCCCCCeeEEEEEE
Q 016891 226 LIIAFNLKSEEFHEVPLPHLENRNDVLVMFVGNF-SGCLYFSCLCNYPQPVDIWVLMGCWTKTFSFPRSVGDYVKALAYS 304 (381)
Q Consensus 226 ~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~-~G~L~~~~~~~~~~~~~iW~l~~~W~~~~~i~~~~~~~~~~~~~~ 304 (381)
.|..+|...+....+..... ....+... +|++.+....++ .+.+|.++.. .+..+.. ......-+++.
T Consensus 408 ~v~~~~~~~~~~~~~~~~~~------~v~~~~~s~d~~~l~~~~~d~--~v~~w~~~~~--~~~~~~~-~~~~v~~~~~s 476 (577)
T 2ymu_A 408 TVKLWNRNGQLLQTLTGHSS------SVWGVAFSPDDQTIASASDDK--TVKLWNRNGQ--LLQTLTG-HSSSVRGVAFS 476 (577)
T ss_dssp EEEEECTTCCEEEEEECCSS------CEEEEEECTTSSEEEEEETTS--EEEEEETTSC--EEEEEEC-CSSCEEEEEEC
T ss_pred EEEEEeCCCCEEEEecCCCC------CeEEEEECCCCCEEEEEcCCC--EEEEEECCCC--EEEEEcC-CCCCEEEEEEc
Confidence 67788876655544432211 12233333 566666555555 7999987632 1222221 11335667778
Q ss_pred eCCCEEEEEecccCCccccCCcEEEEEeCCCCceeeeeE
Q 016891 305 KSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGAAADQV 343 (381)
Q Consensus 305 ~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~~~~~v 343 (381)
++|..|+.. ..+..+.+||...+.. +.+
T Consensus 477 pd~~~las~---------~~d~~i~iw~~~~~~~--~~~ 504 (577)
T 2ymu_A 477 PDGQTIASA---------SDDKTVKLWNRNGQLL--QTL 504 (577)
T ss_dssp TTSCEEEEE---------ETTSEEEEEETTSCEE--EEE
T ss_pred CCCCEEEEE---------eCCCEEEEEcCCCCEE--EEE
Confidence 888844444 3566799999877666 555
No 218
>1egx_A VAsp, vasodilator-stimulated phosphoprotein; EVH1, VAsp-ENA, poly-proline-binding domain, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.4
Probab=28.37 E-value=98 Score=22.74 Aligned_cols=42 Identities=14% Similarity=0.190 Sum_probs=29.0
Q ss_pred cEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEE
Q 016891 120 GIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLV 165 (381)
Q Consensus 120 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~ 165 (381)
.++++||.|++|. |..... ...+.+.+..|...+.|+|+...
T Consensus 12 ~V~~~d~~~~~W~--p~~~g~--~gvs~V~~~~d~~~~~yrI~~~~ 53 (115)
T 1egx_A 12 TVMLYDDGNKRWL--PAGTGP--QAFSRVQIYHNPTANSFRVVGRK 53 (115)
T ss_dssp ECBEECTTTSSCC--BSSCSC--CCCEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEcCCCCcee--ECCCCC--CCccEEEEEEeCCCCEEEEEEEE
Confidence 4688899999975 433210 12245678889888899998874
No 219
>1i2h_A PSD-ZIP45(homer-1C/VESL-1L); enabled VAsp homology 1 domain, signaling protein; 1.80A {Rattus norvegicus} SCOP: b.55.1.4
Probab=28.13 E-value=1.2e+02 Score=23.95 Aligned_cols=40 Identities=20% Similarity=0.331 Sum_probs=28.4
Q ss_pred CcEEEEccCCc-ceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEE
Q 016891 119 NGIALWNPSTE-EHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLV 165 (381)
Q Consensus 119 ~~~~V~NP~T~-~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~ 165 (381)
-.+++.||.|+ .|+..-... ..+.+-+|...+.|+|+.+.
T Consensus 16 A~Vm~~D~~tk~~WvP~g~~~-------~~V~i~~d~~rnsyRIvg~~ 56 (168)
T 1i2h_A 16 AHVFQIDPNTKKNWVPTSKHA-------VTVSYFYDSTRNVYRIISLD 56 (168)
T ss_dssp EEEEEECTTSSCCSEESCSSC-------EEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEECCCCCCceeecCCCC-------eEEEEEEcCCCCEEEEEEcc
Confidence 35889999997 886643321 24556689888889998864
No 220
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=28.01 E-value=4.3e+02 Score=25.79 Aligned_cols=122 Identities=11% Similarity=-0.007 Sum_probs=61.9
Q ss_pred cCcEEEEeeCCCcEEEEccCCcceeeCCCCCCCCC------CceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEE
Q 016891 108 CNGLIAFKNDENGIALWNPSTEEHLILPKFWGDLK------DFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYS 181 (381)
Q Consensus 108 ~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~------~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vys 181 (381)
.+|.|.+......++-+|+.||+.+.--....... ......+..++ ++ +|+... ..-.+..++
T Consensus 76 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~---~~-~v~v~~-------~dg~l~alD 144 (677)
T 1kb0_A 76 VDGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALW---KG-KVYVGA-------WDGRLIALD 144 (677)
T ss_dssp ETTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEE---TT-EEEEEC-------TTSEEEEEE
T ss_pred ECCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEE---CC-EEEEEc-------CCCEEEEEE
Confidence 47877766655678889999988665221111100 00000011111 11 232221 114577788
Q ss_pred cCCC--cEEEccc-CCCcceecCCCcEEECCeeEEEEeeCCCCCCcCEEEEEECCCC--eeeeec
Q 016891 182 LRTN--SWRRIRV-DFPYYILHGWDGTFADGHVHWLVTNNPEDYIENLIIAFNLKSE--EFHEVP 241 (381)
Q Consensus 182 s~t~--~W~~~~~-~~p~~~~~~~~~v~~nG~lYwl~~~~~~~~~~~~i~~fD~~~e--~~~~i~ 241 (381)
.+|+ .|+.-.. ..+........++..+|.+|......+. .....|.+||..+. .|+.-.
T Consensus 145 ~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~-~~~g~v~a~D~~tG~~~W~~~~ 208 (677)
T 1kb0_A 145 AATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEY-GVRGYITAYDAETGERKWRWFS 208 (677)
T ss_dssp TTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTT-CCBCEEEEEETTTCCEEEEEES
T ss_pred CCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEeccccc-CCCCEEEEEECCCCcEEEEecc
Confidence 8776 5886541 1111111222677889999886543210 01238999998764 566543
No 221
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=27.70 E-value=3e+02 Score=23.85 Aligned_cols=135 Identities=8% Similarity=-0.055 Sum_probs=73.3
Q ss_pred eEEEEEEcCCCcEEEcccCCCcceecCC-CcEEE---CCeeEEEEeeCCCCCCcCEEEEEECCCCeeeeecCCCCCCCCC
Q 016891 175 TEIAVYSLRTNSWRRIRVDFPYYILHGW-DGTFA---DGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEVPLPHLENRND 250 (381)
Q Consensus 175 ~~~~vyss~t~~W~~~~~~~p~~~~~~~-~~v~~---nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~ 250 (381)
..+.+|+..++...... .... . ... .++.+ +|.+...+..+ ..|..+|+.++....+........
T Consensus 96 g~i~iwd~~~~~~~~~~-~~~~-h-~~~v~~~~~~~~~~~~l~s~~~d------~~i~iwd~~~~~~~~~~~~~~~~~-- 164 (383)
T 3ei3_B 96 GDIILWDYDVQNKTSFI-QGMG-P-GDAITGMKFNQFNTNQLFVSSIR------GATTLRDFSGSVIQVFAKTDSWDY-- 164 (383)
T ss_dssp SCEEEEETTSTTCEEEE-CCCS-T-TCBEEEEEEETTEEEEEEEEETT------TEEEEEETTSCEEEEEECCCCSSC--
T ss_pred CeEEEEeCCCcccceee-ecCC-c-CCceeEEEeCCCCCCEEEEEeCC------CEEEEEECCCCceEEEeccCCCCC--
Confidence 46888888877665443 1100 0 000 23333 33433333333 279999999877766644332111
Q ss_pred ceeEEEEEE-CCeEEEEEecCCCceEEEEEECCceeEEEEecCCCCCeeEEEEEEeCCC-EEEEEecccCCccccCCcEE
Q 016891 251 VLVMFVGNF-SGCLYFSCLCNYPQPVDIWVLMGCWTKTFSFPRSVGDYVKALAYSKSGG-KVLVDKFEYGEDEDINRWEL 328 (381)
Q Consensus 251 ~~~~~L~~~-~G~L~~~~~~~~~~~~~iW~l~~~W~~~~~i~~~~~~~~~~~~~~~~g~-~i~l~~~~~~~~~~~~~~~l 328 (381)
....+.-. +|.+.+....++ .+.+|.++.+ .+..+.. ......-+.+.+++. .++.. ..+..+
T Consensus 165 -~v~~~~~~~~~~~l~~~~~d~--~i~i~d~~~~--~~~~~~~-h~~~v~~~~~~~~~~~~l~s~---------~~d~~i 229 (383)
T 3ei3_B 165 -WYCCVDVSVSRQMLATGDSTG--RLLLLGLDGH--EIFKEKL-HKAKVTHAEFNPRCDWLMATS---------SVDATV 229 (383)
T ss_dssp -CEEEEEEETTTTEEEEEETTS--EEEEEETTSC--EEEEEEC-SSSCEEEEEECSSCTTEEEEE---------ETTSEE
T ss_pred -CeEEEEECCCCCEEEEECCCC--CEEEEECCCC--EEEEecc-CCCcEEEEEECCCCCCEEEEE---------eCCCEE
Confidence 12233333 577666666555 8999998722 2222321 113455667777776 44444 355679
Q ss_pred EEEeCCC
Q 016891 329 FWYDLQN 335 (381)
Q Consensus 329 ~~yd~~t 335 (381)
.+||+++
T Consensus 230 ~iwd~~~ 236 (383)
T 3ei3_B 230 KLWDLRN 236 (383)
T ss_dssp EEEEGGG
T ss_pred EEEeCCC
Confidence 9999987
No 222
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=27.20 E-value=3.8e+02 Score=24.90 Aligned_cols=99 Identities=12% Similarity=0.195 Sum_probs=52.8
Q ss_pred EEEEEECCCCeeeeec-CCCCCCCCCceeEEEEEECCeEEEEEecCCCceEEEEEEC-CceeEEEEecC-CCCCeeEEEE
Q 016891 226 LIIAFNLKSEEFHEVP-LPHLENRNDVLVMFVGNFSGCLYFSCLCNYPQPVDIWVLM-GCWTKTFSFPR-SVGDYVKALA 302 (381)
Q Consensus 226 ~i~~fD~~~e~~~~i~-~P~~~~~~~~~~~~L~~~~G~L~~~~~~~~~~~~~iW~l~-~~W~~~~~i~~-~~~~~~~~~~ 302 (381)
.|..+|+.+.+....- .+..... .....+.-.+|.+.+....++ .+.+|.++ .+-........ ........+.
T Consensus 230 ~i~vwd~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~l~~~~~d~--~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (615)
T 1pgu_A 230 KISCFDGKSGEFLKYIEDDQEPVQ--GGIFALSWLDSQKFATVGADA--TIRVWDVTTSKCVQKWTLDKQQLGNQQVGVV 305 (615)
T ss_dssp CEEEEETTTCCEEEECCBTTBCCC--SCEEEEEESSSSEEEEEETTS--EEEEEETTTTEEEEEEECCTTCGGGCEEEEE
T ss_pred eEEEEECCCCCEeEEecccccccC--CceEEEEEcCCCEEEEEcCCC--cEEEEECCCCcEEEEEcCCCCcccCceeEEE
Confidence 6999999876543321 1100111 112222222777777776655 79999988 44443333331 1111222222
Q ss_pred EEeCCCEEEEEecccCCccccCCcEEEEEeCCCCce
Q 016891 303 YSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGA 338 (381)
Q Consensus 303 ~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~ 338 (381)
..+++.++.. .....+.+||+++++.
T Consensus 306 -~~~~~~l~~~---------~~~g~i~~~d~~~~~~ 331 (615)
T 1pgu_A 306 -ATGNGRIISL---------SLDGTLNFYELGHDEV 331 (615)
T ss_dssp -EEETTEEEEE---------ETTSCEEEEETTEEEE
T ss_pred -eCCCCeEEEE---------ECCCCEEEEECCCCcE
Confidence 2367745555 4566799999988554
No 223
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=26.84 E-value=3.5e+02 Score=24.31 Aligned_cols=202 Identities=8% Similarity=-0.049 Sum_probs=93.4
Q ss_pred EEEEeeCCCcEEEEccCCcceeeCCC-CCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCCcEEE
Q 016891 111 LIAFKNDENGIALWNPSTEEHLILPK-FWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTNSWRR 189 (381)
Q Consensus 111 Ll~~~~~~~~~~V~NP~T~~~~~LP~-~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W~~ 189 (381)
+|+.......+++++..+++....+. ....+ ......+.+.+..+.-+.+.... . ...+.+|+..++.-..
T Consensus 163 ~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h--~~~v~~~~~sp~~~~~~~l~s~~--~----d~~i~vwd~~~~~~~~ 234 (450)
T 2vdu_B 163 TVIIADKFGDVYSIDINSIPEEKFTQEPILGH--VSMLTDVHLIKDSDGHQFIITSD--R----DEHIKISHYPQCFIVD 234 (450)
T ss_dssp EEEEEETTSEEEEEETTSCCCSSCCCCCSEEC--SSCEEEEEEEECTTSCEEEEEEE--T----TSCEEEEEESCTTCEE
T ss_pred EEEEEeCCCcEEEEecCCcccccccceeeecc--cCceEEEEEcCCCCCCcEEEEEc--C----CCcEEEEECCCCceee
Confidence 34444455667888776665442110 00011 11233455555411112222222 1 1457788877654322
Q ss_pred c-ccCCCcceecCCCcEEE-CCeeEEEEeeCCCCCCcCEEEEEECCCCee-eeecCCC-----CC--------------C
Q 016891 190 I-RVDFPYYILHGWDGTFA-DGHVHWLVTNNPEDYIENLIIAFNLKSEEF-HEVPLPH-----LE--------------N 247 (381)
Q Consensus 190 ~-~~~~p~~~~~~~~~v~~-nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~-~~i~~P~-----~~--------------~ 247 (381)
. ........ ..+.+ +|.+...+..+. .|..+|+.+.+. ..+.... .. .
T Consensus 235 ~~~~~h~~~v----~~~~~sd~~~l~s~~~d~------~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (450)
T 2vdu_B 235 KWLFGHKHFV----SSICCGKDYLLLSAGGDD------KIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENND 304 (450)
T ss_dssp EECCCCSSCE----EEEEECSTTEEEEEESSS------EEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------
T ss_pred eeecCCCCce----EEEEECCCCEEEEEeCCC------eEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccc
Confidence 1 10111001 22333 666555554442 799999987653 3233210 00 0
Q ss_pred CCCceeEEEEEE-CCeEEEEEecCCCceEEEEEE--C--CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCcc-
Q 016891 248 RNDVLVMFVGNF-SGCLYFSCLCNYPQPVDIWVL--M--GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDE- 321 (381)
Q Consensus 248 ~~~~~~~~L~~~-~G~L~~~~~~~~~~~~~iW~l--~--~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~- 321 (381)
........+... +|++.++...... .+.||.+ + ..+..+..+... ....-+++.+ +. +++... +..
T Consensus 305 ~~~~~v~~i~~~~~~~~l~~~~~~d~-~i~iw~~~~~~~~~l~~~~~~~~~--~~v~~~~~~~-~~-~~v~~~---~~~~ 376 (450)
T 2vdu_B 305 IIEFAVSKIIKSKNLPFVAFFVEATK-CIIILEMSEKQKGDLALKQIITFP--YNVISLSAHN-DE-FQVTLD---NKES 376 (450)
T ss_dssp CBCCCEEEEEECSSSSEEEEEETTCS-EEEEEEECSSSTTCEEEEEEEECS--SCEEEEEEET-TE-EEEEEC---CTTC
T ss_pred cceEEEEEEEEeCCCCEEEEEECCCC-eEEEEEeccCCCCceeeccEeccC--CceEEEEecC-Cc-EEEEEe---cccC
Confidence 000111223333 4666666653333 8999999 4 556666666521 2344556665 44 555420 000
Q ss_pred c---cCCcEEEEEeCCCCce
Q 016891 322 D---INRWELFWYDLQNQGA 338 (381)
Q Consensus 322 ~---~~~~~l~~yd~~t~~~ 338 (381)
. .+.-.++.++.+++++
T Consensus 377 ~~~~~~~i~v~~~~~~~~~~ 396 (450)
T 2vdu_B 377 SGVQKNFAKFIEYNLNENSF 396 (450)
T ss_dssp CSSCCCSEEEEEEETTTTEE
T ss_pred CCCCCcceEEEEEEcCCCeE
Confidence 0 0011688889998888
No 224
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=26.74 E-value=3e+02 Score=23.51 Aligned_cols=100 Identities=15% Similarity=0.050 Sum_probs=53.3
Q ss_pred EEEEEECCCCeeeee-cCCCCCCCCCceeEEEEEE-C--CeEEEEEecCCCceEEEEEEC-------CceeEEEEecCCC
Q 016891 226 LIIAFNLKSEEFHEV-PLPHLENRNDVLVMFVGNF-S--GCLYFSCLCNYPQPVDIWVLM-------GCWTKTFSFPRSV 294 (381)
Q Consensus 226 ~i~~fD~~~e~~~~i-~~P~~~~~~~~~~~~L~~~-~--G~L~~~~~~~~~~~~~iW~l~-------~~W~~~~~i~~~~ 294 (381)
.|-.+|..+..+..+ .+.... ..-..+.-. + +.+.+....++ .+.||.++ ..|.....+....
T Consensus 176 ~i~iW~~~~~~~~~~~~~~~h~----~~v~~~~~~~~~~~~~l~s~s~D~--~v~iw~~~~~~~~~~~~~~~~~~~~~~h 249 (330)
T 2hes_X 176 TVRIWKDYDDDWECVAVLNGHE----GTVWSSDFDKTEGVFRLCSGSDDS--TVRVWKYMGDDEDDQQEWVCEAILPDVH 249 (330)
T ss_dssp CEEEEEEETTEEEEEEEECCCS----SCEEEEEECCSSSSCEEEEEETTS--CEEEEEEEEECTTSCEEEEEEEECCSCC
T ss_pred eEEEEECCCCCeeEEEEccCCC----CcEEEEEecCCCCeeEEEEEeCCC--eEEEEEecCCCccccceeEEeeeccccc
Confidence 577888777655443 221111 111222222 2 33333444444 79999886 3466655554211
Q ss_pred CCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCceeeeeE
Q 016891 295 GDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGAAADQV 343 (381)
Q Consensus 295 ~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~~~~~v 343 (381)
.....-+++.++ ..|+.. ..+..+.+||..++++ +.+
T Consensus 250 ~~~v~~v~~s~~-~~l~s~---------~~dg~v~iw~~~~~~~--~~~ 286 (330)
T 2hes_X 250 KRQVYNVAWGFN-GLIASV---------GADGVLAVYEEVDGEW--KVF 286 (330)
T ss_dssp SSCEEEEEECTT-SCEEEE---------ETTSCEEEEEEETTEE--EEE
T ss_pred ccceEEEEEcCC-CEEEEE---------eCCCEEEEEEcCCCce--EEE
Confidence 233445555544 435555 3456799999999887 655
No 225
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=24.60 E-value=4.8e+02 Score=25.15 Aligned_cols=195 Identities=13% Similarity=0.024 Sum_probs=0.0
Q ss_pred EEcccCcEEEEeeCCCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcC
Q 016891 104 IIDSCNGLIAFKNDENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLR 183 (381)
Q Consensus 104 ~~~s~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~ 183 (381)
.+...+.+|+....+..+.|||..+++....-... ......+.+.+ .+.+-+.+-.. ..+.+++..
T Consensus 437 ~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h-----~~~v~~~~~s~-~~~~l~s~s~D--------~~i~iwd~~ 502 (694)
T 3dm0_A 437 VLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGH-----TKDVLSVAFSL-DNRQIVSASRD--------RTIKLWNTL 502 (694)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTTEEEEEEECC-----SSCEEEEEECT-TSSCEEEEETT--------SCEEEECTT
T ss_pred EECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCC-----CCCEEEEEEeC-CCCEEEEEeCC--------CEEEEEECC
Q ss_pred CCcEEEcccCCCcceecCCCcEEECC----eeEEEEeeCCCCCCcCEEEEEECCCCeeeeecCCCCCCCCCceeEEEEEE
Q 016891 184 TNSWRRIRVDFPYYILHGWDGTFADG----HVHWLVTNNPEDYIENLIIAFNLKSEEFHEVPLPHLENRNDVLVMFVGNF 259 (381)
Q Consensus 184 t~~W~~~~~~~p~~~~~~~~~v~~nG----~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~ 259 (381)
+..=..+. .........-.++.+.- .+...+..+. .|..+|+.+.+....-..... ....+...
T Consensus 503 ~~~~~~~~-~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~------~v~vwd~~~~~~~~~~~~h~~-----~v~~v~~s 570 (694)
T 3dm0_A 503 GECKYTIS-EGGEGHRDWVSCVRFSPNTLQPTIVSASWDK------TVKVWNLSNCKLRSTLAGHTG-----YVSTVAVS 570 (694)
T ss_dssp SCEEEEEC-SSTTSCSSCEEEEEECSCSSSCEEEEEETTS------CEEEEETTTCCEEEEECCCSS-----CEEEEEEC
T ss_pred CCcceeec-cCCCCCCCcEEEEEEeCCCCcceEEEEeCCC------eEEEEECCCCcEEEEEcCCCC-----CEEEEEEe
Q ss_pred -CCeEEEEEecCCCceEEEEEEC-CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCc
Q 016891 260 -SGCLYFSCLCNYPQPVDIWVLM-GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQG 337 (381)
Q Consensus 260 -~G~L~~~~~~~~~~~~~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~ 337 (381)
+|++.+.+..++ .+.||.+. ..-....... .....+++.+++. ++.. .....+.+||+++++
T Consensus 571 pdg~~l~sg~~Dg--~i~iwd~~~~~~~~~~~~~----~~v~~~~~sp~~~-~l~~---------~~~~~i~iwd~~~~~ 634 (694)
T 3dm0_A 571 PDGSLCASGGKDG--VVLLWDLAEGKKLYSLEAN----SVIHALCFSPNRY-WLCA---------ATEHGIKIWDLESKS 634 (694)
T ss_dssp TTSSEEEEEETTS--BCEEEETTTTEEEECCBCS----SCEEEEEECSSSS-EEEE---------EETTEEEEEETTTTE
T ss_pred CCCCEEEEEeCCC--eEEEEECCCCceEEEecCC----CcEEEEEEcCCCc-EEEE---------EcCCCEEEEECCCCC
Q ss_pred eeeee
Q 016891 338 AAADQ 342 (381)
Q Consensus 338 ~~~~~ 342 (381)
. ..
T Consensus 635 ~--~~ 637 (694)
T 3dm0_A 635 I--VE 637 (694)
T ss_dssp E--EE
T ss_pred C--hh
No 226
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=24.36 E-value=3.7e+02 Score=23.78 Aligned_cols=67 Identities=9% Similarity=-0.034 Sum_probs=41.0
Q ss_pred CCeEEEEEecCCCceEEEEEEC-CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCce
Q 016891 260 SGCLYFSCLCNYPQPVDIWVLM-GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGA 338 (381)
Q Consensus 260 ~G~L~~~~~~~~~~~~~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~ 338 (381)
+|.+.+....++ .+.+|.++ .+-........ ......-+++.+++..|+.. ..+..+.+||+++++.
T Consensus 181 ~~~~l~~~~~d~--~i~iwd~~~~~~~~~~~~~~-h~~~v~~~~~s~~~~~l~s~---------~~dg~i~iwd~~~~~~ 248 (437)
T 3gre_A 181 EKSLLVALTNLS--RVIIFDIRTLERLQIIENSP-RHGAVSSICIDEECCVLILG---------TTRGIIDIWDIRFNVL 248 (437)
T ss_dssp SCEEEEEEETTS--EEEEEETTTCCEEEEEECCG-GGCCEEEEEECTTSCEEEEE---------ETTSCEEEEETTTTEE
T ss_pred CCCEEEEEeCCC--eEEEEeCCCCeeeEEEccCC-CCCceEEEEECCCCCEEEEE---------cCCCeEEEEEcCCccE
Confidence 466666666655 89999988 33222222210 11345666777788844444 3556799999998776
No 227
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=24.12 E-value=5e+02 Score=25.21 Aligned_cols=100 Identities=13% Similarity=0.173 Sum_probs=57.7
Q ss_pred EEEEEECCCC--eeeeecCCCCCCCCCceeEEEEEECCeEEEEEecCCCceEEEEEEC------CceeEEEEecCCCCCe
Q 016891 226 LIIAFNLKSE--EFHEVPLPHLENRNDVLVMFVGNFSGCLYFSCLCNYPQPVDIWVLM------GCWTKTFSFPRSVGDY 297 (381)
Q Consensus 226 ~i~~fD~~~e--~~~~i~~P~~~~~~~~~~~~L~~~~G~L~~~~~~~~~~~~~iW~l~------~~W~~~~~i~~~~~~~ 297 (381)
.|..+|+.+. .+..+..+.... .. .+..-++.|++....+.. ...|+.+. ..|..+ ++... .
T Consensus 260 ~i~~~d~~~~~~~~~~l~~~~~~~----~~-~~~~~g~~l~~~t~~~~~-~~~l~~~d~~~~~~~~~~~l--~~~~~-~- 329 (693)
T 3iuj_A 260 RLYVKDLSQENAPLLTVQGDLDAD----VS-LVDNKGSTLYLLTNRDAP-NRRLVTVDAANPGPAHWRDL--IPERQ-Q- 329 (693)
T ss_dssp EEEEEETTSTTCCCEEEECSSSSC----EE-EEEEETTEEEEEECTTCT-TCEEEEEETTSCCGGGCEEE--ECCCS-S-
T ss_pred EEEEEECCCCCCceEEEeCCCCce----EE-EEeccCCEEEEEECCCCC-CCEEEEEeCCCCCccccEEE--ecCCC-C-
Confidence 5777787665 666664443321 12 244456788887766543 45566655 347743 23211 1
Q ss_pred eEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCceeeeeEEE
Q 016891 298 VKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGAAADQVTI 345 (381)
Q Consensus 298 ~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~~~~~v~~ 345 (381)
.. .+..+++.|++... .....+|..+|++++.. +.+..
T Consensus 330 -~~-~~s~~g~~lv~~~~------~~g~~~l~~~d~~g~~~--~~l~~ 367 (693)
T 3iuj_A 330 -VL-TVHSGSGYLFAEYM------VDATARVEQFDYEGKRV--REVAL 367 (693)
T ss_dssp -CE-EEEEETTEEEEEEE------ETTEEEEEEECTTSCEE--EEECC
T ss_pred -EE-EEEEECCEEEEEEE------ECCeeEEEEEECCCCee--EEeec
Confidence 12 66777876777631 01123699999998888 77744
No 228
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=23.93 E-value=3.4e+02 Score=23.15 Aligned_cols=67 Identities=13% Similarity=0.104 Sum_probs=40.8
Q ss_pred CCeEEEEEecCCCceEEEEEEC---CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCC
Q 016891 260 SGCLYFSCLCNYPQPVDIWVLM---GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQ 336 (381)
Q Consensus 260 ~G~L~~~~~~~~~~~~~iW~l~---~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~ 336 (381)
+|++.+.+..++ .+.||.+. ..+..+..+.. ......-+.+.+++. +++.. ..+..+.+||..++
T Consensus 118 ~g~~las~s~D~--~v~iwd~~~~~~~~~~~~~~~~-h~~~v~~v~~~p~~~-~l~s~--------s~D~~i~iW~~~~~ 185 (330)
T 2hes_X 118 DGYYLATCSRDK--SVWIWETDESGEEYECISVLQE-HSQDVKHVIWHPSEA-LLASS--------SYDDTVRIWKDYDD 185 (330)
T ss_dssp TSCEEEEEETTS--CEEEEECCTTCCCCEEEEEECC-CSSCEEEEEECSSSS-EEEEE--------ETTSCEEEEEEETT
T ss_pred CCCEEEEEeCCC--EEEEEeccCCCCCeEEEEEecc-CCCceEEEEECCCCC-EEEEE--------cCCCeEEEEECCCC
Confidence 455555555545 79999985 45665555541 112355566677887 44442 34556888888777
Q ss_pred ce
Q 016891 337 GA 338 (381)
Q Consensus 337 ~~ 338 (381)
.+
T Consensus 186 ~~ 187 (330)
T 2hes_X 186 DW 187 (330)
T ss_dssp EE
T ss_pred Ce
Confidence 65
No 229
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=23.56 E-value=3.2e+02 Score=22.79 Aligned_cols=66 Identities=12% Similarity=0.186 Sum_probs=39.4
Q ss_pred CeEEEEEecCCCceEEEEEEC---CceeEEEEecCCCCCeeEEEEEEeCC--CEEEEEecccCCccccCCcEEEEEeCCC
Q 016891 261 GCLYFSCLCNYPQPVDIWVLM---GCWTKTFSFPRSVGDYVKALAYSKSG--GKVLVDKFEYGEDEDINRWELFWYDLQN 335 (381)
Q Consensus 261 G~L~~~~~~~~~~~~~iW~l~---~~W~~~~~i~~~~~~~~~~~~~~~~g--~~i~l~~~~~~~~~~~~~~~l~~yd~~t 335 (381)
+++.+....++ .+.||.++ ..|.....+.. -.....-+++.+++ +.+++.. ..+..+.+||+++
T Consensus 170 ~~~l~sgs~D~--~v~lwd~~~~~~~~~~~~~l~~-H~~~V~~v~~sp~~~~~~~las~--------s~D~~v~iWd~~~ 238 (297)
T 2pm7_B 170 SRKFVTGGADN--LVKIWKYNSDAQTYVLESTLEG-HSDWVRDVAWSPTVLLRSYMASV--------SQDRTCIIWTQDN 238 (297)
T ss_dssp CCEEEEEETTS--CEEEEEEETTTTEEEEEEEECC-CSSCEEEEEECCCCSSSEEEEEE--------ETTSCEEEEEESS
T ss_pred cceEEEEcCCC--cEEEEEEcCCCceEEEEEEecC-CCCceEEEEECCCCCCceEEEEE--------ECCCcEEEEEeCC
Confidence 44555555555 79999987 44666666651 11235566666764 2244442 3455688999877
Q ss_pred Cc
Q 016891 336 QG 337 (381)
Q Consensus 336 ~~ 337 (381)
.+
T Consensus 239 ~~ 240 (297)
T 2pm7_B 239 EQ 240 (297)
T ss_dssp TT
T ss_pred CC
Confidence 43
No 230
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=22.26 E-value=5.4e+02 Score=24.86 Aligned_cols=161 Identities=14% Similarity=0.108 Sum_probs=81.9
Q ss_pred EEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCCcEEEcccCCCcceecCCCcEEE---CCeeEEEEeeCCCCCC
Q 016891 147 VDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTNSWRRIRVDFPYYILHGWDGTFA---DGHVHWLVTNNPEDYI 223 (381)
Q Consensus 147 ~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W~~~~~~~p~~~~~~~~~v~~---nG~lYwl~~~~~~~~~ 223 (381)
..++.||+..+ +|++.- . ....+..++..+..++.+. .-. ... ..++.+ +|.|||.....
T Consensus 351 ~~~ld~d~~~~--~ly~sD----~--~~~~I~r~~~~g~~~~~v~-~~~--~~~-p~GlAvD~~~~~lY~tD~~~----- 413 (619)
T 3s94_A 351 AIAIDYDPVEG--YIYWTD----D--EVRAIRRSFIDGSGSQFVV-TAQ--IAH-PDGIAVDWVARNLYWTDTGT----- 413 (619)
T ss_dssp EEEEEEETTTT--EEEEEE----T--TTTEEEEEETTSCSCEEEE-CSS--CSC-CCEEEEETTTTEEEEEETTT-----
T ss_pred cEEEEEEcCCC--eEEEEe----C--CCCeEEEEEcCCCccEEEE-ECC--CCC-cCceEEecccCcEEEEeCCC-----
Confidence 45677776555 222221 0 1134555566555555443 111 111 145554 58999986543
Q ss_pred cCEEEEEECCCCeeeeecCCCCCCCCCceeEEEEE--ECCeEEEEEecCCCceEEEEEECCceeEEEEecCCCCCeeEEE
Q 016891 224 ENLIIAFNLKSEEFHEVPLPHLENRNDVLVMFVGN--FSGCLYFSCLCNYPQPVDIWVLMGCWTKTFSFPRSVGDYVKAL 301 (381)
Q Consensus 224 ~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~--~~G~L~~~~~~~~~~~~~iW~l~~~W~~~~~i~~~~~~~~~~~ 301 (381)
..|.++++....-+.+-. ... . ....|+. .+|.||+....... ++....|+.+-.+.. +.... ....-+
T Consensus 414 -~~I~v~~~~G~~~~~l~~-~~l--~--~P~~iavdp~~G~ly~tD~g~~~-~I~r~~~dG~~~~~l-~~~~l-~~P~Gl 484 (619)
T 3s94_A 414 -DRIEVTRLNGTMRKILIS-EDL--E--EPRAIVLDPMVGYMYWTDWGEIP-KIERAALDGSDRVVL-VNTSL-GWPNGL 484 (619)
T ss_dssp -TEEEEEETTSCSCEEEEC-TTC--C--SEEEEEEETTTTEEEEEECSSSC-EEEEEETTSCSCEEE-ECSSC-SCEEEE
T ss_pred -CcEEEEeCCCCeEEEEEE-CCC--C--CeeeEEEEcCCCcEEEecCCCCC-EEEEEccCCCccEEE-EeCCC-CCCeee
Confidence 279999998764433321 111 1 1223443 36899988765433 444444452212111 22111 123334
Q ss_pred EEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCceeeeeE
Q 016891 302 AYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGAAADQV 343 (381)
Q Consensus 302 ~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~~~~~v 343 (381)
++..+++.||+.- ....+|..+|++.... +.+
T Consensus 485 alD~~~~~LY~aD--------~~~~~I~~~~~dG~~~--~~~ 516 (619)
T 3s94_A 485 ALDYDEGKIYWGD--------AKTDKIEVMNTDGTGR--RVL 516 (619)
T ss_dssp EEETTTTEEEEEE--------TTTTEEEEEESSSCCC--EEE
T ss_pred EEcccCCEEEEEE--------CCCCEEEEEecCCCce--EEE
Confidence 5554466688872 3345788888887766 555
No 231
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=22.13 E-value=6.3e+02 Score=25.62 Aligned_cols=96 Identities=10% Similarity=0.050 Sum_probs=54.9
Q ss_pred EEEEEECCCCeeeeecCCCCCCCCCceeEEEEEECCeEEEEEecCCCceEEEEEEC-CceeEEEEecCCCCCeeEEEEEE
Q 016891 226 LIIAFNLKSEEFHEVPLPHLENRNDVLVMFVGNFSGCLYFSCLCNYPQPVDIWVLM-GCWTKTFSFPRSVGDYVKALAYS 304 (381)
Q Consensus 226 ~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~~G~L~~~~~~~~~~~~~iW~l~-~~W~~~~~i~~~~~~~~~~~~~~ 304 (381)
.|..+|..+.+.... .+.. ..-..|.-..|++.+....++ .+.||.++ .+-.. .+. .......+.+.
T Consensus 40 ~I~lw~~~~~~~~~~-~~~~-----~~V~~l~fspg~~L~S~s~D~--~v~lWd~~~~~~~~--~~~--~~~~V~~v~~s 107 (902)
T 2oaj_A 40 EVHIYGQQQVEVVIK-LEDR-----SAIKEMRFVKGIYLVVINAKD--TVYVLSLYSQKVLT--TVF--VPGKITSIDTD 107 (902)
T ss_dssp EEEEECSTTCEEEEE-CSSC-----CCEEEEEEETTTEEEEEETTC--EEEEEETTTCSEEE--EEE--CSSCEEEEECC
T ss_pred EEEEEeCCCcEEEEE-cCCC-----CCEEEEEEcCCCEEEEEECcC--eEEEEECCCCcEEE--EEc--CCCCEEEEEEC
Confidence 677777766554322 2211 112234334477433333334 89999998 44332 222 11345667777
Q ss_pred eCCCEEEEEecccCCccccCCcEEEEEeCCCCceeeeeEE
Q 016891 305 KSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGAAADQVT 344 (381)
Q Consensus 305 ~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~~~~~v~ 344 (381)
++++.|+.. .....+.+||+++++. ....
T Consensus 108 p~g~~l~sg---------s~dg~V~lwd~~~~~~--~~~~ 136 (902)
T 2oaj_A 108 ASLDWMLIG---------LQNGSMIVYDIDRDQL--SSFK 136 (902)
T ss_dssp TTCSEEEEE---------ETTSCEEEEETTTTEE--EEEE
T ss_pred CCCCEEEEE---------cCCCcEEEEECCCCcc--ccce
Confidence 888855555 4556799999999887 5443
No 232
>3kvp_A Uncharacterized protein YMZC; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.40A {Bacillus subtilis}
Probab=21.49 E-value=85 Score=20.60 Aligned_cols=17 Identities=6% Similarity=0.159 Sum_probs=14.4
Q ss_pred cEEEEEeCCCCceeeeeEE
Q 016891 326 WELFWYDLQNQGAAADQVT 344 (381)
Q Consensus 326 ~~l~~yd~~t~~~~~~~v~ 344 (381)
-+||.||.++|.+ +.++
T Consensus 40 iKIykyde~tNeI--~LkK 56 (72)
T 3kvp_A 40 IKIYEYNESRNEV--KLKK 56 (72)
T ss_dssp EEEEEEETTTTEE--EEEE
T ss_pred EEEEEeCCCCCeE--EEEE
Confidence 4799999999999 7663
No 233
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=21.46 E-value=5.7e+02 Score=24.85 Aligned_cols=121 Identities=12% Similarity=-0.023 Sum_probs=60.1
Q ss_pred cCcEEEEeeCCCcEEEEccCCcceeeCCCCCCCCC------CceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEE
Q 016891 108 CNGLIAFKNDENGIALWNPSTEEHLILPKFWGDLK------DFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYS 181 (381)
Q Consensus 108 ~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~------~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vys 181 (381)
.+|.|.+......++-+|+.||+.+.--....... ......+..++ ++ +|+... ..-.+..++
T Consensus 65 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~v~v~~-------~dg~l~alD 133 (668)
T 1kv9_A 65 HDGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALW---GD-KVYVGT-------LDGRLIALD 133 (668)
T ss_dssp ETTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEE---BT-EEEEEC-------TTSEEEEEE
T ss_pred ECCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEEE---CC-EEEEEc-------CCCEEEEEE
Confidence 47777666555678888998887554211111000 00000001111 11 232221 114577788
Q ss_pred cCCC--cEEEcccCCCcceecCCCcEEECCeeEEEEeeCCCCCCcCEEEEEECCCC--eeeee
Q 016891 182 LRTN--SWRRIRVDFPYYILHGWDGTFADGHVHWLVTNNPEDYIENLIIAFNLKSE--EFHEV 240 (381)
Q Consensus 182 s~t~--~W~~~~~~~p~~~~~~~~~v~~nG~lYwl~~~~~~~~~~~~i~~fD~~~e--~~~~i 240 (381)
.+|+ .|+.-....+........++..+|.+|.-....+. .....|.+||..+. .|+.-
T Consensus 134 ~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~-~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 134 AKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEY-GVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp TTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTT-CCBCEEEEEETTTCCEEEEEE
T ss_pred CCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCc-CCCCEEEEEECCCCcEEEEec
Confidence 8776 58865412111111222667889999875433110 01238999998764 56654
No 234
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=21.41 E-value=6.5e+02 Score=25.51 Aligned_cols=188 Identities=10% Similarity=0.072 Sum_probs=90.2
Q ss_pred EEEeeCCCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCCCcEEEcc
Q 016891 112 IAFKNDENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRTNSWRRIR 191 (381)
Q Consensus 112 l~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t~~W~~~~ 191 (381)
|.....+..+.|||..+.+....... ......+.|.+ +.+ ++... . ...+.+++.+++.-...-
T Consensus 32 lAsgs~Dg~I~lw~~~~~~~~~~~~~------~~~V~~l~fsp--g~~-L~S~s---~----D~~v~lWd~~~~~~~~~~ 95 (902)
T 2oaj_A 32 LAIATVTGEVHIYGQQQVEVVIKLED------RSAIKEMRFVK--GIY-LVVIN---A----KDTVYVLSLYSQKVLTTV 95 (902)
T ss_dssp EEEEETTSEEEEECSTTCEEEEECSS------CCCEEEEEEET--TTE-EEEEE---T----TCEEEEEETTTCSEEEEE
T ss_pred EEEEeCCCEEEEEeCCCcEEEEEcCC------CCCEEEEEEcC--CCE-EEEEE---C----cCeEEEEECCCCcEEEEE
Confidence 33333455678888777665442211 12345566676 443 33322 1 156888888776432111
Q ss_pred cCCCcceecCCCcEEE--CCeeEEEEeeCCCCCCcCEEEEEECCCCeeeeecCCC------CCCCCCceeEEEEEE--CC
Q 016891 192 VDFPYYILHGWDGTFA--DGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEVPLPH------LENRNDVLVMFVGNF--SG 261 (381)
Q Consensus 192 ~~~p~~~~~~~~~v~~--nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~------~~~~~~~~~~~L~~~--~G 261 (381)
..+... ..+.+ +|..-..+..+ ..|..+|+.+.+......|. ....+...-..+.-. ++
T Consensus 96 -~~~~~V----~~v~~sp~g~~l~sgs~d------g~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~ 164 (902)
T 2oaj_A 96 -FVPGKI----TSIDTDASLDWMLIGLQN------GSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDI 164 (902)
T ss_dssp -ECSSCE----EEEECCTTCSEEEEEETT------SCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEE
T ss_pred -cCCCCE----EEEEECCCCCEEEEEcCC------CcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCC
Confidence 111000 22222 33332333222 16889999887653222211 001111112233333 23
Q ss_pred eEEEEEecCCCceEEEEEEC-CceeEEEEec--C-CC------------CCeeEEEEEEeCCCEEEEEecccCCccccCC
Q 016891 262 CLYFSCLCNYPQPVDIWVLM-GCWTKTFSFP--R-SV------------GDYVKALAYSKSGGKVLVDKFEYGEDEDINR 325 (381)
Q Consensus 262 ~L~~~~~~~~~~~~~iW~l~-~~W~~~~~i~--~-~~------------~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~ 325 (381)
.+.++...++ .+ ||.++ .+-.+..... + .. .....-+++.++|. .++.. ..+
T Consensus 165 ~~l~~g~~dg--~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~-~lasg--------s~D 232 (902)
T 2oaj_A 165 GTVLISYEYV--TL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSL-HIITI--------HED 232 (902)
T ss_dssp EEEEEECSSC--EE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSS-EEEEE--------ETT
T ss_pred CEEEEEeCCC--cE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCC-EEEEE--------ECC
Confidence 4444444444 78 99988 4322222111 0 00 12355677778888 44442 355
Q ss_pred cEEEEEeCCCCce
Q 016891 326 WELFWYDLQNQGA 338 (381)
Q Consensus 326 ~~l~~yd~~t~~~ 338 (381)
..+.+||+++++.
T Consensus 233 g~i~lWd~~~g~~ 245 (902)
T 2oaj_A 233 NSLVFWDANSGHM 245 (902)
T ss_dssp CCEEEEETTTCCE
T ss_pred CeEEEEECCCCcE
Confidence 6799999988765
No 235
>2kwv_A RAD30 homolog B, DNA polymerase IOTA; ubiquitin-binding motif, UBM, TL protein binding-signaling protein complex; HET: DNA; NMR {Mus musculus}
Probab=20.80 E-value=48 Score=19.91 Aligned_cols=16 Identities=50% Similarity=0.615 Sum_probs=11.0
Q ss_pred CCCcHHHHHHHHccCC
Q 016891 2 AGLPTDINIDILSRLS 17 (381)
Q Consensus 2 ~~LPdDll~eIL~rLP 17 (381)
..||.|+-+|||+--.
T Consensus 22 ~~LP~dIQ~Ells~~~ 37 (48)
T 2kwv_A 22 KQLPADIQEEILSGKS 37 (48)
T ss_dssp TTSCHHHHHHHTTCCC
T ss_pred HHCcHHHHHHHHhcch
Confidence 3677777777776544
No 236
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=20.78 E-value=5.7e+02 Score=24.64 Aligned_cols=192 Identities=11% Similarity=0.030 Sum_probs=97.4
Q ss_pred cccCcEEEEee-CCCcEEEEccCCcceeeCCCCCCCCCCceEEEEEeEECCCCCEEEEEEEEEeecCccceEEEEEEcCC
Q 016891 106 DSCNGLIAFKN-DENGIALWNPSTEEHLILPKFWGDLKDFMVVDGFGYDAVNDDYKVVRLVQLVIGNVGYTEIAVYSLRT 184 (381)
Q Consensus 106 ~s~~GLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~d~~~~~ykVv~~~~~~~~~~~~~~~~vyss~t 184 (381)
++.+|.|.+.+ ....++.+++-......+-...... ..++.+|...+ ++++.- .+...+++.++.+
T Consensus 357 d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~-----p~GlAvD~~~~--~lY~tD------~~~~~I~v~~~~G 423 (619)
T 3s94_A 357 DPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAH-----PDGIAVDWVAR--NLYWTD------TGTDRIEVTRLNG 423 (619)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSC-----CCEEEEETTTT--EEEEEE------TTTTEEEEEETTS
T ss_pred EcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCC-----cCceEEecccC--cEEEEe------CCCCcEEEEeCCC
Confidence 44578777776 4567888888765443332222111 22566676544 232221 1225677887765
Q ss_pred CcEEEcccCCCcceecCCCcEEE---CCeeEEEEeeCCCCCCcCEEEEEECCCCeeeeecCCCCCCCCCceeEEEEEE--
Q 016891 185 NSWRRIRVDFPYYILHGWDGTFA---DGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEVPLPHLENRNDVLVMFVGNF-- 259 (381)
Q Consensus 185 ~~W~~~~~~~p~~~~~~~~~v~~---nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~~~L~~~-- 259 (381)
..-+.+. .- .+... .++.+ +|.|||...... ..|..+++....-..+- ..... ..--|+.-
T Consensus 424 ~~~~~l~-~~--~l~~P-~~iavdp~~G~ly~tD~g~~-----~~I~r~~~dG~~~~~l~-~~~l~----~P~GlalD~~ 489 (619)
T 3s94_A 424 TMRKILI-SE--DLEEP-RAIVLDPMVGYMYWTDWGEI-----PKIERAALDGSDRVVLV-NTSLG----WPNGLALDYD 489 (619)
T ss_dssp CSCEEEE-CT--TCCSE-EEEEEETTTTEEEEEECSSS-----CEEEEEETTSCSCEEEE-CSSCS----CEEEEEEETT
T ss_pred CeEEEEE-EC--CCCCe-eeEEEEcCCCcEEEecCCCC-----CEEEEEccCCCccEEEE-eCCCC----CCeeeEEccc
Confidence 5333332 11 11111 45555 599999875331 27999998754333321 11111 11233333
Q ss_pred CCeEEEEEecCCCceEEEEEECCceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCCce
Q 016891 260 SGCLYFSCLCNYPQPVDIWVLMGCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQGA 338 (381)
Q Consensus 260 ~G~L~~~~~~~~~~~~~iW~l~~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~~~ 338 (381)
+++||++..... ++....++..-.+.. +.. ....|.++.-.++.||+.- .....|+..|..++.-
T Consensus 490 ~~~LY~aD~~~~--~I~~~~~dG~~~~~~-~~~---~l~~P~glav~~~~ly~tD--------~~~~~I~~~~k~~g~~ 554 (619)
T 3s94_A 490 EGKIYWGDAKTD--KIEVMNTDGTGRRVL-VED---KIPHIFGFTLLGDYVYWTD--------WQRRSIERVHKRSAER 554 (619)
T ss_dssp TTEEEEEETTTT--EEEEEESSSCCCEEE-EEC---CCCSSCCEEEETTEEEEEC--------TTSSCEEEEESSSCCE
T ss_pred CCEEEEEECCCC--EEEEEecCCCceEEE-ecc---CCCCcEEEEEECCEEEEee--------cCCCeEEEEEcCCCce
Confidence 689999876554 444444442222211 111 1123333333344588882 2345699999999855
No 237
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=20.55 E-value=2.5e+02 Score=27.73 Aligned_cols=56 Identities=14% Similarity=0.132 Sum_probs=29.9
Q ss_pred eEEEEEEcCCCcEEEcccCCCcceecCCCcEEECCeeEEEEeeCCCCCCcCEEEEEECCCCee
Q 016891 175 TEIAVYSLRTNSWRRIRVDFPYYILHGWDGTFADGHVHWLVTNNPEDYIENLIIAFNLKSEEF 237 (381)
Q Consensus 175 ~~~~vyss~t~~W~~~~~~~p~~~~~~~~~v~~nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~ 237 (381)
..+++|+..+..-+.+. ...........-.+..+.+||...... .|.++|..+.+.
T Consensus 562 ~~I~~~d~dG~~~~~~~-~~~~~~~~P~glavd~~~lywtd~~~~------~V~~~d~~~G~~ 617 (699)
T 1n7d_A 562 HSISSIDVNGGNRKTIL-EDEKRLAHPFSLAVFEDKVFWTDIINE------AIFSANRLTGSD 617 (699)
T ss_dssp TEEEEECSSSSCCEEEC-CCSSSCSSCCCCEEETTEEEEECSTTT------CEEEEETTTEEE
T ss_pred CeEEEEccCCCceEEEE-ecCCcCCCceEeEEECCEEEEEeCCCC------eEEEEEccCCCc
Confidence 45667776543333332 111111111133445679999885542 799999876544
No 238
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=20.31 E-value=3.9e+02 Score=22.56 Aligned_cols=87 Identities=11% Similarity=0.048 Sum_probs=0.0
Q ss_pred CCeEEEEEecCCCceEEEEEEC---CceeEEEEecCCCCCeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEeCCCC
Q 016891 260 SGCLYFSCLCNYPQPVDIWVLM---GCWTKTFSFPRSVGDYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYDLQNQ 336 (381)
Q Consensus 260 ~G~L~~~~~~~~~~~~~iW~l~---~~W~~~~~i~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd~~t~ 336 (381)
++.+.+....++ .+.+|.+. .........-..-......+.+.++|..|+-. ..+..+.+||++++
T Consensus 29 ~~~~l~s~s~D~--~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~---------s~D~~v~~wd~~~~ 97 (319)
T 3frx_A 29 QPNLLLSASRDK--TLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSA---------SWDKTLRLWDVATG 97 (319)
T ss_dssp CTTEEEEEETTS--EEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEE---------ETTSEEEEEETTTT
T ss_pred CccEEEEecCCc--cEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEE---------eCCCEEEEEECCCC
Q ss_pred ceeeeeEEEecCCCCceeEEEEeec
Q 016891 337 GAAADQVTIHGVPQGCRDTIVCVDS 361 (381)
Q Consensus 337 ~~~~~~v~~~~~~~~~~~~~~y~~s 361 (381)
+. .-.+.+.... .....+.+.
T Consensus 98 ~~---~~~~~~h~~~-v~~~~~~~~ 118 (319)
T 3frx_A 98 ET---YQRFVGHKSD-VMSVDIDKK 118 (319)
T ss_dssp EE---EEEEECCSSC-EEEEEECTT
T ss_pred Ce---eEEEccCCCc-EEEEEEcCC
No 239
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=20.18 E-value=4.2e+02 Score=22.82 Aligned_cols=125 Identities=15% Similarity=0.184 Sum_probs=64.3
Q ss_pred CcEEE--CCeeEEEEeeCCCCCCcCEEEEEECCCCeeeeecCCCCCCC---CCceeEEEEEE-CCeEEEEEecC---CCc
Q 016891 203 DGTFA--DGHVHWLVTNNPEDYIENLIIAFNLKSEEFHEVPLPHLENR---NDVLVMFVGNF-SGCLYFSCLCN---YPQ 273 (381)
Q Consensus 203 ~~v~~--nG~lYwl~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~---~~~~~~~L~~~-~G~L~~~~~~~---~~~ 273 (381)
.+|.+ +|.+|.-....... . ..|..+| +.+. .++|..... .-..-..+... +|+|+++.... ...
T Consensus 20 ~~va~~~~g~~~v~~~~~~~~-~-~~l~~~~--~g~~--~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~ 93 (343)
T 2qe8_A 20 GNITLTPDGRLFLSLHQFYQP-E-MQVAELT--QDGL--IPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVP 93 (343)
T ss_dssp EEEEECTTSCEEEEECGGGCC-S-CSEEEEE--TTEE--EESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCC
T ss_pred ceEEECCCCCEEEEeCCCCCC-c-eEEEEEC--CCCe--ecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCC
Confidence 44444 58887654221100 0 2577777 4443 344432110 00112233333 58999988642 112
Q ss_pred eEEEEEEC-CceeEEEEecCC---CCCeeEEEEEEeCCCEEEEEecccCCcccc---CCcEEEEEeCCCCceeeeeE
Q 016891 274 PVDIWVLM-GCWTKTFSFPRS---VGDYVKALAYSKSGGKVLVDKFEYGEDEDI---NRWELFWYDLQNQGAAADQV 343 (381)
Q Consensus 274 ~~~iW~l~-~~W~~~~~i~~~---~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~---~~~~l~~yd~~t~~~~~~~v 343 (381)
++.+|.++ .+-.+...++.. ......-+.+..+++.+++.. . ....+.+||+++++. .++
T Consensus 94 ~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd--------~~~~~~~~i~v~d~~~g~~--~r~ 160 (343)
T 2qe8_A 94 KLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISD--------PAPDDKAALIRVDLQTGLA--ARV 160 (343)
T ss_dssp EEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEE--------CCSGGGCEEEEEETTTCCE--EEE
T ss_pred eEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEc--------CccCCCCeEEEEECCCCCE--EEE
Confidence 66666666 444445555421 112334566665555587872 2 345799999998877 554
No 240
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=20.01 E-value=4.4e+02 Score=25.56 Aligned_cols=76 Identities=12% Similarity=-0.011 Sum_probs=46.4
Q ss_pred ECCeEEEEEecCCCceEEEEEEC---CceeEEEEecCC-CC--CeeEEEEEEeCCCEEEEEecccCCccccCCcEEEEEe
Q 016891 259 FSGCLYFSCLCNYPQPVDIWVLM---GCWTKTFSFPRS-VG--DYVKALAYSKSGGKVLVDKFEYGEDEDINRWELFWYD 332 (381)
Q Consensus 259 ~~G~L~~~~~~~~~~~~~iW~l~---~~W~~~~~i~~~-~~--~~~~~~~~~~~g~~i~l~~~~~~~~~~~~~~~l~~yd 332 (381)
-++.+++.....+...-.||.+. ..|..+...+.. -+ ....-..+.++|++|.+....-| .....|+++|
T Consensus 78 dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G----~~~~~i~v~d 153 (695)
T 2bkl_A 78 RNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNA----ADEAVLHVID 153 (695)
T ss_dssp ETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETT----CSCCEEEEEE
T ss_pred ECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCC----CceEEEEEEE
Confidence 34566666665543356789887 667766554421 11 23444566789997776632111 1235799999
Q ss_pred CCCCce
Q 016891 333 LQNQGA 338 (381)
Q Consensus 333 ~~t~~~ 338 (381)
+++++.
T Consensus 154 l~tg~~ 159 (695)
T 2bkl_A 154 VDSGEW 159 (695)
T ss_dssp TTTCCB
T ss_pred CCCCCC
Confidence 999988
Done!