BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016892
(381 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8LA32|LUL4_ARATH Probable E3 ubiquitin-protein ligase LUL4 OS=Arabidopsis thaliana
GN=LUL4 PE=2 SV=1
Length = 359
Score = 344 bits (883), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 184/309 (59%), Positives = 222/309 (71%), Gaps = 27/309 (8%)
Query: 84 NSCGYPNPMMGRFSYQFQYQPPYYANQA--HGWPAAAR-------QSQVGPPPPYVDHQS 134
NSC Y + Y + QPP Y A + W R Q Q PP PY++ Q+
Sbjct: 65 NSCSYGH-------YHYHPQPPQYFTTAQPNWWGPMMRPAYYCPPQPQTQPPKPYLEQQN 117
Query: 135 AKKVRNDVNVHKHTLKIEVDEENPDHVLVSFVFDALFDGSITVFYFAKEEPNCKFVPLFP 194
AKKVRNDVNVH+ T+++EVD+ P H LVSFVFDALFDGS T+ +FAKEEPNC +P FP
Sbjct: 118 AKKVRNDVNVHRDTVRLEVDDLVPGHHLVSFVFDALFDGSFTITFFAKEEPNCTIIPQFP 177
Query: 195 EAYMPAKIPFKKGLGQKFRQPSGTGIDLGFYELDDLSKPSLGEDIFPLVISAET-HQPSS 253
E Y P + F+KG GQKF QPSGTG DL F+ LDDLSKP L ED++PLVISAET P+S
Sbjct: 178 EVYSPTRFHFQKGPGQKFLQPSGTGTDLSFFVLDDLSKP-LEEDVYPLVISAETIISPNS 236
Query: 254 SNDGHLDDPVSNTSAHMQITQAVLEKNNDDLFQVKVIRQILWVDGVRYELREIYG-IGNS 312
++ +S H Q+TQAVLEK+ND F+VKV++QILW++GVRYELRE+YG
Sbjct: 237 ISE--------QSSVHKQVTQAVLEKDNDGSFKVKVVKQILWIEGVRYELRELYGSTTQG 288
Query: 313 AAEGFEDSDPGKECVICMTEPKDTAVLPCRHMCMCGECAKELRLQSNKCPICRQPIEELI 372
AA G ++S G ECVICMTE KDTAVLPCRH+CMC +CAKELRLQSNKCPICRQPIEEL+
Sbjct: 289 AASGLDESGSGTECVICMTEAKDTAVLPCRHLCMCSDCAKELRLQSNKCPICRQPIEELL 348
Query: 373 EIKINSGDQ 381
EIK+NS D+
Sbjct: 349 EIKMNSSDE 357
>sp|Q84ME1|LUL3_ARATH Probable E3 ubiquitin-protein ligase LUL3 OS=Arabidopsis thaliana
GN=LUL3 PE=1 SV=1
Length = 378
Score = 334 bits (857), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 181/322 (56%), Positives = 226/322 (70%), Gaps = 43/322 (13%)
Query: 68 PPQAPVNPYY--YHSHGYNSCGYPNPMMGRFSYQFQYQPPYYANQAHGWPAAARQSQVGP 125
P QAP PY+ YH +G+N PMM +P Y+ P A + P
Sbjct: 90 PQQAP--PYFTGYHHNGFN------PMM---------RPVYFGPT----PVAVME----P 124
Query: 126 PPPYVDHQSAKKVRNDVNVHKHTLKIEVDEENPDHVLVSFVFDALFDGSITVFYFAKEEP 185
P PYV+HQ+AKKV+NDVNV+K T+++ D+ NP H LVSFVFDALFDGS T+ +F +EE
Sbjct: 125 PAPYVEHQTAKKVKNDVNVNKATVRLVADDLNPGHYLVSFVFDALFDGSFTIIFFGEEES 184
Query: 186 NCKFVPLFPEAYMPAKIPFKKGLGQKFRQPSGTGIDLGFYELDDLSKPSLGEDIFPLVIS 245
C VP PEA+ P K+PF+KG GQKF Q GTGIDLGF+ LDDLSKPS E+++PLVIS
Sbjct: 185 KCTIVPHLPEAFPPIKVPFQKGAGQKFLQAPGTGIDLGFFSLDDLSKPS-PEEVYPLVIS 243
Query: 246 AETH-QPSSSNDGHLDDPVSNTSAHMQITQAVLEKNNDDLFQVKVIRQILWVDGVRYELR 304
AET PSS ++ L H QITQAVLEK ND F+VKV++QILW++G RYEL+
Sbjct: 244 AETVISPSSVSEEPL--------VHKQITQAVLEKTNDGSFKVKVMKQILWIEGERYELQ 295
Query: 305 EIYGIGNS-----AAEGFEDSDPGKECVICMTEPKDTAVLPCRHMCMCGECAKELRLQSN 359
E+YGI NS AA G ED+ GKECVIC+TEPKDTAV+PCRH+C+C +CA+ELR Q+N
Sbjct: 296 ELYGIDNSITQGTAASGLEDTG-GKECVICLTEPKDTAVMPCRHLCLCSDCAEELRFQTN 354
Query: 360 KCPICRQPIEELIEIKINSGDQ 381
KCPICRQPI EL++IK+ S D+
Sbjct: 355 KCPICRQPIHELVKIKVESSDE 376
>sp|Q9S752|LOFG2_ARATH Probable E3 ubiquitin-protein ligase LOG2 OS=Arabidopsis thaliana
GN=LOG2 PE=1 SV=1
Length = 388
Score = 257 bits (656), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 129/269 (47%), Positives = 173/269 (64%), Gaps = 31/269 (11%)
Query: 123 VGPPPPYVDHQSAKKVRNDVNVHKHTLKIEVDEENPDHVLVSFVFDALFDGSITVFYFAK 182
+ P PYV+HQ A +RNDVN+ K +L++E D +NP LVSF FDA G I+V +FAK
Sbjct: 117 MAQPTPYVEHQKAVTIRNDVNLKKESLRLEPDPDNPGRFLVSFTFDATVSGRISVIFFAK 176
Query: 183 EEPNCKFVPLFPEAYMPAKIPFKKGLGQKFRQPSGTGIDLGFYELDDLSKPSLGEDIFPL 242
E +CK + P + F+KGLGQKF+Q SG+GID +E +L K + +I+PL
Sbjct: 177 ESEDCKLTATKEDILPPITLDFEKGLGQKFKQSSGSGIDFSVFEDVELFKAAADTEIYPL 236
Query: 243 VISAET----------HQPSSSNDGHLDDPVSNTSAHMQITQAVLEKNNDDLFQVKVIRQ 292
+ AE + S N QITQAV EK+ ++ +++V++Q
Sbjct: 237 AVKAEAAPSGGENEEEERSGSKN--------------AQITQAVYEKDKGEI-KIRVVKQ 281
Query: 293 ILWVDGVRYELREIYGIGNSAAEG-----FEDSDPGKECVICMTEPKDTAVLPCRHMCMC 347
ILWV+G RYEL+EIYGIGN+ EG + +DPGKECVIC++EP+DT VLPCRHMCMC
Sbjct: 282 ILWVNGTRYELQEIYGIGNT-VEGDDDSADDANDPGKECVICLSEPRDTTVLPCRHMCMC 340
Query: 348 GECAKELRLQSNKCPICRQPIEELIEIKI 376
CAK LR Q+N+CPICRQP+E L+EIK+
Sbjct: 341 SGCAKVLRFQTNRCPICRQPVERLLEIKV 369
>sp|Q9LFH6|LUL2_ARATH Probable E3 ubiquitin-protein ligase LUL2 OS=Arabidopsis thaliana
GN=LUL2 PE=2 SV=1
Length = 299
Score = 251 bits (641), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 134/299 (44%), Positives = 185/299 (61%), Gaps = 27/299 (9%)
Query: 88 YPNPMMGRFSYQFQYQPPYYANQAHGWPAAARQSQVGPPPPYVDHQSAKKVRNDVNVHKH 147
YPNP YQ Y PY + + ++ P YV+HQ A +RND+N+ K
Sbjct: 22 YPNP---NAQYQGNYPSPYQDCARYPY------GEMASPVQYVEHQEAVTIRNDINLKKE 72
Query: 148 TLKIEVDEENPDHVLVSFVFDALFDGSITVFYFAKEEPNCKFVPLFPEAYMPAKIPFKKG 207
TL++E DE+NP L+SF FDA GSITV +FAKE +C + + + ++ F KG
Sbjct: 73 TLRLEPDEQNPGKFLLSFTFDASVPGSITVMFFAKEGKDCNLIATKEDLFPSTQVSFAKG 132
Query: 208 LGQKFRQPSGTGIDLGFYELDDLSKPSLGE----DIFPLVISAETHQPSSSNDGHLDDPV 263
L Q+F+Q GTGID D+S+ L E D++ + + AE S D H P
Sbjct: 133 LEQRFKQACGTGIDFS-----DMSEADLVEANETDVYHVAVKAEV----VSEDDH---PE 180
Query: 264 SNTSAHMQITQAVLEKNNDDLFQVKVIRQILWVDGVRYELREIYGIGNSAAEGFEDSDP- 322
S T + QIT VLEK++ ++ +V++QILWV+G RY L+EIYGIGN+ + ED++
Sbjct: 181 SGT-PNRQITHVVLEKDHKGEYKARVVKQILWVNGNRYVLQEIYGIGNTVDDNGEDANER 239
Query: 323 GKECVICMTEPKDTAVLPCRHMCMCGECAKELRLQSNKCPICRQPIEELIEIKINSGDQ 381
GKECVIC++EP+DT VLPCRHMCMC CAK LR Q+N CPICRQP++ L+EI +N+ D+
Sbjct: 240 GKECVICLSEPRDTTVLPCRHMCMCSGCAKLLRFQTNLCPICRQPVDRLLEITVNNNDR 298
>sp|Q9LYW5|LUL1_ARATH Probable E3 ubiquitin-protein ligase LUL1 OS=Arabidopsis thaliana
GN=LUL1 PE=1 SV=1
Length = 337
Score = 237 bits (604), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 136/316 (43%), Positives = 177/316 (56%), Gaps = 39/316 (12%)
Query: 63 PPPQPPPQAPVNPYYYHSHGYNSCGYPNPMMGRFSYQFQYQPPYYANQAHGWPAAARQSQ 122
PP PP P N + H + NS P+P+ HG +
Sbjct: 61 PPVTEPPMLPYNFNHLHHYPPNSYQLPHPLF------------------HGG-----RYP 97
Query: 123 VGPPPPYVDHQSAKKVRNDVNVHKHTLKIEVDEENPDHVLVSFVFDALFDGSITVFYFAK 182
+ PPP YV HQ A +RNDVN+ K TL + D ENP+ +LVSF FDA G ITV +FA
Sbjct: 98 ILPPPTYV-HQKAVTIRNDVNLKKKTLTLIPDPENPNRLLVSFTFDASMPGRITVVFFAT 156
Query: 183 EEPNCKFVPLFPEAYMPAKIPFKKGLGQKFRQPSGTGIDLGFYELDDLSKPSLGEDIFPL 242
E+ C + P F +GLGQKF Q SGTGIDL ++ +L K + D+FPL
Sbjct: 157 EDAECNLRATKEDTLPPITFDFGEGLGQKFIQSSGTGIDLTAFKDSELFK-EVDTDVFPL 215
Query: 243 VISAETHQPSSSNDGHLDDPVSNTSAHMQITQAVLEKNNDDLFQVKVIRQILWVDGVRYE 302
+ AE G S ++QITQ V K ++ +++V++QILWV+ RYE
Sbjct: 216 AVKAEATPAEEGKSG---------STNVQITQVVYTKEKGEI-KIEVVKQILWVNKRRYE 265
Query: 303 LREIYGIGNSAAEGFEDSDPGKECVICMTEPKDTAVLPCRHMCMCGECAKELRLQSNKCP 362
L EIYGI N+ + SD GKECV+C++EP+DT VLPCRHMCMC CAK LR Q+N CP
Sbjct: 266 LLEIYGIENTV----DGSDEGKECVVCLSEPRDTTVLPCRHMCMCSGCAKALRFQTNLCP 321
Query: 363 ICRQPIEELIEIKINS 378
+CRQP+E L+EI N
Sbjct: 322 VCRQPVEMLLEINKNG 337
>sp|O60291|MGRN1_HUMAN E3 ubiquitin-protein ligase MGRN1 OS=Homo sapiens GN=MGRN1 PE=1
SV=2
Length = 552
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/270 (33%), Positives = 138/270 (51%), Gaps = 35/270 (12%)
Query: 128 PYVD---HQSAKKVRNDVNVHKHTLKIEVDEENPD---------HVLVS--FVFDALFDG 173
PYV H+ K +R+ VN+ K +L++ +++ D VL S F FDA
Sbjct: 71 PYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSLEFTFDADARV 130
Query: 174 SITVFYFAKEE---PNCKFVPLFPEAYMPAKIPFKKGLGQKFRQPSGTGIDLGFYELDDL 230
+IT++ A EE + P P + + +K+G+ Q+F PS ID ++ D+L
Sbjct: 131 AITIYCQASEEFLNGRAVYSPKSP-SLQSETVHYKRGVSQQFSLPS-FKIDFSEWKDDEL 188
Query: 231 SKPSLGEDIFPLVISAETHQPSSSNDGHLDDPVSNTSAHMQITQAVLEKNNDDLFQVKVI 290
+ L +FP+VI A + + H + A EK+ D F VK +
Sbjct: 189 NF-DLDRGVFPVVIQAVVDEGDVVE----------VTGHAHVLLAAFEKHMDGSFSVKPL 237
Query: 291 RQILWVDGVRYELREIYGIGNSAAEGF-----EDSDPGKECVICMTEPKDTAVLPCRHMC 345
+Q VD V Y L+EIYGI N + E+SD ECV+C+++ +DT +LPCRH+C
Sbjct: 238 KQKQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLC 297
Query: 346 MCGECAKELRLQSNKCPICRQPIEELIEIK 375
+C CA LR Q+N CPICR P L++I+
Sbjct: 298 LCTSCADTLRYQANNCPICRLPFRALLQIR 327
>sp|Q96PX1|RN157_HUMAN RING finger protein 157 OS=Homo sapiens GN=RNF157 PE=1 SV=3
Length = 679
Score = 136 bits (342), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 132/269 (49%), Gaps = 36/269 (13%)
Query: 126 PPPYVDHQSAKKVRNDVNVHKHTLKI-----------EVDEENPDHVLVSFVFDALFDGS 174
PPP + K +R+ VN+ K TL++ E + H V F FD +
Sbjct: 75 PPP---QEPVKTLRSLVNIRKDTLRLVKCAEEVKSPGEEASKAKVHYNVEFTFDTDARVA 131
Query: 175 ITVFYFAKEEPNCKFVPLFPE--AYMPAKIPFKKGLGQKFRQPSGTGIDLGFYELDDLSK 232
IT++Y A EE P+ + + +K+G+ Q+F PS T +D + ++L
Sbjct: 132 ITIYYQATEEFQNGIASYIPKDNSLQSETVQYKRGVCQQFCLPSHT-VDPSEWAEEELGF 190
Query: 233 PSLGEDIFPLVISAETHQPSSSNDGHLDDPVSNTSAHMQITQAVLEKNNDDLFQVKVIRQ 292
L +++PLV+ H D + H + EK+ D F VK ++Q
Sbjct: 191 -DLDREVYPLVV----HAVVDEGDEYF--------GHCHVLLGTFEKHTDGTFCVKPLKQ 237
Query: 293 ILWVDGVRYELREIYGIGN------SAAEGFEDSDPGKECVICMTEPKDTAVLPCRHMCM 346
VDGV Y L+EIYGI N S E SD ECV+C+++ +DT +LPCRH+C+
Sbjct: 238 KQVVDGVSYLLQEIYGIENKYNTQDSKVAEDEVSDNSAECVVCLSDVRDTLILPCRHLCL 297
Query: 347 CGECAKELRLQSNKCPICRQPIEELIEIK 375
C CA LR Q+N CPICR P L++I+
Sbjct: 298 CNTCADTLRYQANNCPICRLPFRALLQIR 326
>sp|Q9D074|MGRN1_MOUSE E3 ubiquitin-protein ligase MGRN1 OS=Mus musculus GN=Mgrn1 PE=1
SV=2
Length = 532
Score = 135 bits (341), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 94/274 (34%), Positives = 139/274 (50%), Gaps = 43/274 (15%)
Query: 128 PYVD---HQSAKKVRNDVNVHKHTLKIEVDEENPD---------HVLVS--FVFDALFDG 173
PYV H+ K +R+ VN+ K +L++ +E+ D VL S F FDA
Sbjct: 71 PYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKEDADSPTEDGEKPRVLYSLEFTFDADARV 130
Query: 174 SITVFYFAKEEP-------NCKFVPLFPEAYMPAKIPFKKGLGQKFRQPSGTGIDLGFYE 226
+IT++ A EE +CK L E + +K+G+ Q+F PS ID ++
Sbjct: 131 AITIYCQAVEELVNGVAVYSCKNPSLQSET-----VHYKRGVSQQFSLPS-FKIDFSEWK 184
Query: 227 LDDLSKPSLGEDIFPLVISAETHQPSSSNDGHLDDPVSNTSAHMQITQAVLEKNNDDLFQ 286
D+L+ L +FP+VI A + + H + A EK+ D F
Sbjct: 185 DDELNF-DLDRGVFPVVIQAVVDEGDVVE----------VTGHAHVLLAAFEKHVDGSFS 233
Query: 287 VKVIRQILWVDGVRYELREIYGIGNSAAEGF-----EDSDPGKECVICMTEPKDTAVLPC 341
VK ++Q VD V Y L+EIYGI N + E+SD ECV+C+++ +DT +LPC
Sbjct: 234 VKPLKQKQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSSECVVCLSDLRDTLILPC 293
Query: 342 RHMCMCGECAKELRLQSNKCPICRQPIEELIEIK 375
RH+C+C CA LR Q+N CPICR P L++I+
Sbjct: 294 RHLCLCTSCADTLRYQANNCPICRLPFRALLQIR 327
>sp|Q6INH1|RN157_XENLA RING finger protein 157 OS=Xenopus laevis GN=rnf157 PE=2 SV=1
Length = 674
Score = 135 bits (340), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 133/260 (51%), Gaps = 33/260 (12%)
Query: 135 AKKVRNDVNVHKHTLKI----------EVDEENPD-HVLVSFVFDALFDGSITVFYFAKE 183
K +R+ +N+ K TL++ V+ P H V F FD +IT++Y A E
Sbjct: 81 VKTLRSLINIRKDTLRLVRCTEELKTTGVEGSRPKVHYNVEFTFDTDARVAITMYYQATE 140
Query: 184 EPNCKFVPLFPEA--YMPAKIPFKKGLGQKFRQPSGTGIDLGFYELDDLSKPSLGEDIFP 241
E P++ + FK+G+ Q+F PS T +D + ++L+ L +++P
Sbjct: 141 EFQGGIPSYLPKSSNLQSDTVHFKRGVSQQFCFPSHT-VDPSEWREEELTF-DLDREVYP 198
Query: 242 LVISAETHQPSSSNDGHLDDPVSNTSAHMQITQAVLEKNNDDLFQVKVIRQILWVDGVRY 301
+V+ A + + HL H + A EK+ D F VK ++Q VDGV Y
Sbjct: 199 MVVHAVVEE----GEEHL--------GHSHVLMATFEKHADGSFCVKPLKQKQVVDGVSY 246
Query: 302 ELREIYGIGN------SAAEGFEDSDPGKECVICMTEPKDTAVLPCRHMCMCGECAKELR 355
L+EIYGI N S E SD ECV+C+++ +DT +LPCRH+C+C CA LR
Sbjct: 247 LLQEIYGIENKYNSQDSKVAEDELSDNSAECVVCLSDVRDTLILPCRHLCLCNACADTLR 306
Query: 356 LQSNKCPICRQPIEELIEIK 375
Q++ CPICR P L++I+
Sbjct: 307 YQASNCPICRLPFRALLQIR 326
>sp|Q5XIQ4|MGRN1_RAT E3 ubiquitin-protein ligase MGRN1 OS=Rattus norvegicus GN=Mgrn1
PE=2 SV=1
Length = 533
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/274 (33%), Positives = 139/274 (50%), Gaps = 43/274 (15%)
Query: 128 PYVD---HQSAKKVRNDVNVHKHTLKIEVDEENPD---------HVLVS--FVFDALFDG 173
PYV H+ K +R+ VN+ K +L++ +++ D VL S F FDA
Sbjct: 72 PYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDTDSPTEDGEKPRVLYSLEFTFDADARV 131
Query: 174 SITVFYFAKEE-------PNCKFVPLFPEAYMPAKIPFKKGLGQKFRQPSGTGIDLGFYE 226
+IT++ A EE +CK L E + +K+G+ Q+F PS ID ++
Sbjct: 132 AITIYCQAVEEFVNGMTVYSCKNPSLQSET-----VHYKRGVSQQFSLPS-FKIDFSEWK 185
Query: 227 LDDLSKPSLGEDIFPLVISAETHQPSSSNDGHLDDPVSNTSAHMQITQAVLEKNNDDLFQ 286
D+L+ L +FP+VI A + + H + A EK+ D F
Sbjct: 186 DDELNF-DLDRGVFPVVIQAVVDEGDVVE----------VTGHAHVLLAAFEKHVDGSFS 234
Query: 287 VKVIRQILWVDGVRYELREIYGIGNSAAEGF-----EDSDPGKECVICMTEPKDTAVLPC 341
VK ++Q VD V Y L+EIYGI N + E+SD ECV+C+++ +DT +LPC
Sbjct: 235 VKPLKQKQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSSECVVCLSDLRDTLILPC 294
Query: 342 RHMCMCGECAKELRLQSNKCPICRQPIEELIEIK 375
RH+C+C CA LR Q+N CPICR P L++I+
Sbjct: 295 RHLCLCTSCADTLRYQANNCPICRLPFRALLQIR 328
>sp|Q7ZUL9|MGRN1_DANRE Probable E3 ubiquitin-protein ligase MGRN1 OS=Danio rerio GN=mgrn1
PE=2 SV=1
Length = 529
Score = 132 bits (333), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/269 (32%), Positives = 140/269 (52%), Gaps = 35/269 (13%)
Query: 128 PYVD---HQSAKKVRNDVNVHKHTLKIEVDEENPD---------HVL--VSFVFDALFDG 173
PYV H+ K +R+ VN+ K +L++ +++ D VL V F FD
Sbjct: 71 PYVTPAAHEPVKTLRSLVNIRKDSLRLVRYKDDSDSTPEDTGDPRVLYSVEFCFDTDARV 130
Query: 174 SITVFYFAKEEPNCKFVPLFPEA--YMPAKIPFKKGLGQKFRQPSGTGIDLGFYELDDLS 231
+IT++ A EE ++ + + +K+G+ Q+F PS ID ++ ++L+
Sbjct: 131 AITLYCQAFEEFANGMAIYSAKSPSMVSETVHYKRGINQQFSLPS-FKIDFTKWKPEELN 189
Query: 232 KPSLGEDIFPLVISAETHQPSSSNDGHLDDPVSNTSAHMQITQAVLEKNNDDLFQVKVIR 291
L + +FPLV+ A + D + + H + A E++ D F VK ++
Sbjct: 190 F-DLDKGVFPLVVQA------------IVDDGDDVTGHAHVLLAAFERHVDGSFSVKPLK 236
Query: 292 QILWVDGVRYELREIYGIGN-----SAAEGFEDSDPGKECVICMTEPKDTAVLPCRHMCM 346
Q VD V Y L+EIYGI N + + E+SD ECV+C+++ +DT +LPCRH+C+
Sbjct: 237 QKQIVDRVSYLLQEIYGIENRNNQETKSTEDENSDNSSECVVCLSDLRDTLILPCRHLCL 296
Query: 347 CGECAKELRLQSNKCPICRQPIEELIEIK 375
C CA LR Q+N CPICR P L++I+
Sbjct: 297 CNACADTLRYQANNCPICRLPFRALLQIR 325
>sp|Q3TEL6|RN157_MOUSE RING finger protein 157 OS=Mus musculus GN=Rnf157 PE=2 SV=2
Length = 685
Score = 132 bits (331), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 140/289 (48%), Gaps = 43/289 (14%)
Query: 106 YYANQAHGWPAAARQSQVGPPPPYVDHQSAKKVRNDVNVHKHTLKI-----EVDEENPD- 159
+ N+ +P AA PPP + K +R+ +N+ K TL++ EV +
Sbjct: 62 FLGNRPVAFPYAA-------PPP---QEPVKTLRSLINIRKDTLRLVKCAEEVKSHGEEA 111
Query: 160 -----HVLVSFVFDALFDGSITVFYFAKEEPNCKFVPLFPE--AYMPAKIPFKKGLGQKF 212
H V F FD +IT++Y A EE P+ + + +K+G+ Q+F
Sbjct: 112 GKAKVHYNVEFTFDTDARVAITIYYQATEEFQNGIASYIPKDNSLQSETVHYKRGVFQQF 171
Query: 213 RQPSGTGIDLGFYELDDLSKPSLGEDIFPLVISAETHQPSSSNDGHLDDPVSNTSAHMQI 272
PS T +D + ++L L +++PLV+ H D + H +
Sbjct: 172 CLPSHT-VDPSEWAEEELGF-DLDREVYPLVV----HAVVDEGDEYF--------GHCHV 217
Query: 273 TQAVLEKNNDDLFQVKVIRQILWVDGVRYELREIYGIGN------SAAEGFEDSDPGKEC 326
EK+ D F VK ++Q VDGV Y L+EIYGI N S + SD EC
Sbjct: 218 LLGTFEKHPDGTFCVKPLKQKQVVDGVSYLLQEIYGIENKYNTQDSKVAEDDVSDNSAEC 277
Query: 327 VICMTEPKDTAVLPCRHMCMCGECAKELRLQSNKCPICRQPIEELIEIK 375
V+C+++ +DT +LPCRH+C+C CA LR Q+N CPICR P L++I+
Sbjct: 278 VVCLSDVRDTLILPCRHLCLCNTCADTLRYQANNCPICRLPFRALLQIR 326
>sp|Q0MW30|NEU1B_MOUSE E3 ubiquitin-protein ligase NEURL1B OS=Mus musculus GN=Neurl1b PE=1
SV=1
Length = 546
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 325 ECVICMTEPKDTAVLPCRHMCMCGECAKELRLQSNK-CPICRQPIEELIEI 374
EC +C DT + C HMC+C C LR Q+ CPICR+PI+++I+I
Sbjct: 493 ECTVCFDSEVDTVIYTCGHMCLCHGCGLRLRRQARACCPICRRPIKDVIKI 543
>sp|A8MQ27|NEU1B_HUMAN E3 ubiquitin-protein ligase NEURL1B OS=Homo sapiens GN=NEURL1B PE=1
SV=1
Length = 555
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 325 ECVICMTEPKDTAVLPCRHMCMCGECAKELRLQSNK-CPICRQPIEELIEI 374
EC +C DT + C HMC+C C L+ Q+ CPICR+PI+++I+I
Sbjct: 502 ECTVCFDGEVDTVIYTCGHMCLCHSCGLRLKRQARACCPICRRPIKDVIKI 552
>sp|Q5M870|NEUL3_RAT E3 ubiquitin-protein ligase NEURL3 OS=Rattus norvegicus GN=Neurl3
PE=2 SV=1
Length = 254
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 323 GKECVICMTEPKDTAVLPCRHMCMCGECAKELRLQSNKCPICRQPIEEL-IEIKINSGD 380
G+ECVIC +T ++PC H CG CA + + +CP+CR IEE+ +E + SG+
Sbjct: 194 GEECVICFHNTANTRLMPCGHSQFCGSCAWHIFKDTARCPMCRWQIEEVAVEPSVKSGE 252
>sp|P41435|IAP1_NPVAC Apoptosis inhibitor 1 OS=Autographa californica nuclear
polyhedrosis virus GN=IAP1 PE=4 SV=1
Length = 286
Score = 52.0 bits (123), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 315 EGFEDSDPGKECVICMTEPKDTAVLPCRHMCMCGECAKELRLQSNKCPICRQPIEELIEI 374
E +D + EC +C+ +D ++PCRH C+C +C L KCP CRQ + + I+I
Sbjct: 227 ENADDIEEKYECKVCLERQRDAVLMPCRHFCVCVQCYFGL---DQKCPTCRQDVTDFIKI 283
Query: 375 KI 376
+
Sbjct: 284 FV 285
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.138 0.450
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 180,254,372
Number of Sequences: 539616
Number of extensions: 9599236
Number of successful extensions: 168402
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1772
Number of HSP's successfully gapped in prelim test: 1767
Number of HSP's that attempted gapping in prelim test: 65862
Number of HSP's gapped (non-prelim): 40498
length of query: 381
length of database: 191,569,459
effective HSP length: 119
effective length of query: 262
effective length of database: 127,355,155
effective search space: 33367050610
effective search space used: 33367050610
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)