BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 016893
         (381 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|2EA5|A Chain A, Solution Structure Of The Ring Domain Of The Human Cell
           Growth Regulator With Ring Finger Domain 1 Protein
          Length = 68

 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 5/62 (8%)

Query: 310 GNSAAEGFEDSDP-GKECVICMTEPKDTAVLPCRHMCMCGECAKELRLQSNKCPICRQPI 368
           G+S + G E S+   K+CV+C     +  +LPCRH C+C  C K  +    +CP+CRQ +
Sbjct: 1   GSSGSSGVEPSEENSKDCVVCQNGTVNWVLLPCRHTCLCDGCVKYFQ----QCPMCRQFV 56

Query: 369 EE 370
           +E
Sbjct: 57  QE 58


>pdb|2VJE|A Chain A, Crystal Structure Of The Mdm2-Mdmx Ring Domain Heterodimer
 pdb|2VJE|C Chain C, Crystal Structure Of The Mdm2-Mdmx Ring Domain Heterodimer
 pdb|2VJF|A Chain A, Crystal Structure Of The Mdm2-Mdmx Ring Domain Heterodimer
 pdb|2VJF|C Chain C, Crystal Structure Of The Mdm2-Mdmx Ring Domain Heterodimer
          Length = 64

 Score = 47.4 bits (111), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/49 (38%), Positives = 32/49 (65%), Gaps = 2/49 (4%)

Query: 326 CVICMTEPKDTAVLPCR--HMCMCGECAKELRLQSNKCPICRQPIEELI 372
           CVIC   PK+  ++  +  H+  C  CAK+L+ ++  CP+CRQPI+ ++
Sbjct: 11  CVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQMIV 59


>pdb|2HDP|A Chain A, Solution Structure Of Hdm2 Ring Finger Domain
 pdb|2HDP|B Chain B, Solution Structure Of Hdm2 Ring Finger Domain
          Length = 63

 Score = 47.4 bits (111), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/49 (38%), Positives = 32/49 (65%), Gaps = 2/49 (4%)

Query: 326 CVICMTEPKDTAVLPCR--HMCMCGECAKELRLQSNKCPICRQPIEELI 372
           CVIC   PK+  ++  +  H+  C  CAK+L+ ++  CP+CRQPI+ ++
Sbjct: 10  CVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQMIV 58


>pdb|3EB5|A Chain A, Structure Of The Ciap2 Ring Domain
 pdb|3EB6|A Chain A, Structure Of The Ciap2 Ring Domain Bound To Ubch5b
          Length = 74

 Score = 45.4 bits (106), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 4/46 (8%)

Query: 324 KECVICMTEPKDTAVLPCRHMCMCGECAKELRLQSNKCPICRQPIE 369
           + C +CM +      +PC H+ +C +CA  LR    KCPICR  I+
Sbjct: 25  RTCKVCMDKEVSIVFIPCGHLVVCKDCAPSLR----KCPICRSTIK 66


>pdb|3T6P|A Chain A, Iap Antagonist-Induced Conformational Change In Ciap1
           Promotes E3 Ligase Activation Via Dimerization
          Length = 345

 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 4/60 (6%)

Query: 310 GNSAAEGFEDSDPGKECVICMTEPKDTAVLPCRHMCMCGECAKELRLQSNKCPICRQPIE 369
           G S  E        + C +CM +      +PC H+ +C ECA  LR    KCPICR  I+
Sbjct: 282 GLSLEEQLRRLQEERTCKVCMDKEVSVVFIPCGHLVVCQECAPSLR----KCPICRGIIK 337


>pdb|2VJE|B Chain B, Crystal Structure Of The Mdm2-Mdmx Ring Domain Heterodimer
 pdb|2VJE|D Chain D, Crystal Structure Of The Mdm2-Mdmx Ring Domain Heterodimer
 pdb|2VJF|B Chain B, Crystal Structure Of The Mdm2-Mdmx Ring Domain Heterodimer
 pdb|2VJF|D Chain D, Crystal Structure Of The Mdm2-Mdmx Ring Domain Heterodimer
          Length = 63

 Score = 42.7 bits (99), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 2/55 (3%)

Query: 324 KECVICMTEPKDTAVLPCR--HMCMCGECAKELRLQSNKCPICRQPIEELIEIKI 376
           K C +C   P+D  ++  R  H+  C  CA+ L+     CPIC++ I+ +I++ I
Sbjct: 8   KPCSLCEKRPRDGNIIHGRTGHLVTCFHCARRLKKAGASCPICKKEIQLVIKVFI 62


>pdb|4AUQ|B Chain B, Structure Of Birc7-Ubch5b-Ub Complex.
 pdb|4AUQ|E Chain E, Structure Of Birc7-Ubch5b-Ub Complex
          Length = 62

 Score = 40.8 bits (94), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 5/49 (10%)

Query: 324 KECVICMTEPKDTAVLPCRHMCMCGECAKELRLQSNKCPICRQPIEELI 372
           + C +C+        +PC H+ +C ECA  L+L    CPICR P+   +
Sbjct: 14  RTCKVCLDRAVSIVFVPCGHL-VCAECAPGLQL----CPICRAPVRSRV 57


>pdb|2YHN|A Chain A, The Idol-Ube2d Complex Mediates Sterol-Dependent
           Degradation Of The Ldl Receptor
 pdb|2YHN|B Chain B, The Idol-Ube2d Complex Mediates Sterol-Dependent
           Degradation Of The Ldl Receptor
 pdb|2YHO|A Chain A, The Idol-Ube2d Complex Mediates Sterol-Dependent
           Degradation Of The Ldl Receptor
 pdb|2YHO|C Chain C, The Idol-Ube2d Complex Mediates Sterol-Dependent
           Degradation Of The Ldl Receptor
 pdb|2YHO|E Chain E, The Idol-Ube2d Complex Mediates Sterol-Dependent
           Degradation Of The Ldl Receptor
 pdb|2YHO|G Chain G, The Idol-Ube2d Complex Mediates Sterol-Dependent
           Degradation Of The Ldl Receptor
          Length = 79

 Score = 39.7 bits (91), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 4/46 (8%)

Query: 326 CVICMTEPKDTAVLPCRHMCMCGECAKELRLQSNKCPICRQPIEEL 371
           C++C  E  ++   PC H   C  CA +L+     CP+CR  +E +
Sbjct: 21  CMVCCEEEINSTFCPCGHTVCCESCAAQLQ----SCPVCRSRVEHV 62


>pdb|2ECG|A Chain A, Solution Structure Of The Ring Domain Of The Baculoviral
           Iap Repeat-Containing Protein 4 From Homo Sapiens
          Length = 75

 Score = 37.0 bits (84), Expect = 0.020,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 4/41 (9%)

Query: 324 KECVICMTEPKDTAVLPCRHMCMCGECAKELRLQSNKCPIC 364
           K C ICM        +PC H+  C +CA+ +    +KCP+C
Sbjct: 26  KLCKICMDRNIAIVFVPCGHLVTCKQCAEAV----DKCPMC 62


>pdb|4IC3|A Chain A, Crystal Structure Of The F495l Mutant Xiap Ring Domain
 pdb|4IC3|B Chain B, Crystal Structure Of The F495l Mutant Xiap Ring Domain
          Length = 74

 Score = 36.6 bits (83), Expect = 0.023,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 4/41 (9%)

Query: 324 KECVICMTEPKDTAVLPCRHMCMCGECAKELRLQSNKCPIC 364
           K C ICM        +PC H+  C +CA+ +    +KCP+C
Sbjct: 25  KLCKICMDRNIAIVFVPCGHLVTCKQCAEAV----DKCPMC 61


>pdb|4IC2|A Chain A, Crystal Structure Of The Xiap Ring Domain
 pdb|4IC2|B Chain B, Crystal Structure Of The Xiap Ring Domain
          Length = 74

 Score = 36.6 bits (83), Expect = 0.023,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 4/41 (9%)

Query: 324 KECVICMTEPKDTAVLPCRHMCMCGECAKELRLQSNKCPIC 364
           K C ICM        +PC H+  C +CA+ +    +KCP+C
Sbjct: 25  KLCKICMDRNIAIVFVPCGHLVTCKQCAEAV----DKCPMC 61


>pdb|1CHC|A Chain A, Structure Of The C3hc4 Domain By 1h-Nuclear Magnetic
           Resonance Spectroscopy; A New Structural Class Of Zinc-
           Finger
          Length = 68

 Score = 33.5 bits (75), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 5/63 (7%)

Query: 323 GKECVICMTEPKD-TAVLPCRHMCMCGECAKELRLQSNKCPICRQPIEEL---IEIKINS 378
            + C IC+ +P + +  LPC H   C  C      Q+  CP+C+ P+E +   IE     
Sbjct: 5   AERCPICLEDPSNYSMALPCLHA-FCYVCITRWIRQNPTCPLCKVPVESVVHTIESDSEF 63

Query: 379 GDQ 381
           GDQ
Sbjct: 64  GDQ 66


>pdb|2D8T|A Chain A, Solution Structure Of The Ring Domain Of The Human Ring
           Finger Protein 146
          Length = 71

 Score = 33.1 bits (74), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%)

Query: 325 ECVICMTEPKDTAVLPCRHMCMCGECAKELRLQSNKCPICRQPIEE 370
           EC IC+        LPC+H+  C  C K       +C +CRQ I E
Sbjct: 17  ECAICLQTCVHPVSLPCKHV-FCYLCVKGASWLGKRCALCRQEIPE 61


>pdb|2YUR|A Chain A, Solution Structure Of The Ring Finger Of Human
           Retinoblastoma-Binding Protein 6
          Length = 74

 Score = 32.7 bits (73), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 3/60 (5%)

Query: 310 GNSAAEGFEDSDPGKE-CVICMTEPKDTAVLPCRHMCMCGECAKELRLQSNK--CPICRQ 366
           G+S + G +D  P +  C+IC     D  V+PC     C EC +   L+S++  CP C Q
Sbjct: 1   GSSGSSGEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCHQ 60


>pdb|3LRQ|A Chain A, Crystal Structure Of The U-Box Domain Of Human Ubiquitin-
           Protein Ligase (E3), Northeast Structural Genomics
           Consortium Target Hr4604d.
 pdb|3LRQ|B Chain B, Crystal Structure Of The U-Box Domain Of Human Ubiquitin-
           Protein Ligase (E3), Northeast Structural Genomics
           Consortium Target Hr4604d.
 pdb|3LRQ|C Chain C, Crystal Structure Of The U-Box Domain Of Human Ubiquitin-
           Protein Ligase (E3), Northeast Structural Genomics
           Consortium Target Hr4604d.
 pdb|3LRQ|D Chain D, Crystal Structure Of The U-Box Domain Of Human Ubiquitin-
           Protein Ligase (E3), Northeast Structural Genomics
           Consortium Target Hr4604d
          Length = 100

 Score = 32.3 bits (72), Expect = 0.41,   Method: Composition-based stats.
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 3/46 (6%)

Query: 326 CVICMTEPKDTAVLP-CRHMCMCGECAKE-LRLQSNKCPICRQPIE 369
           C IC  + +D  + P C  +C C  C +  L  Q  +CP CR P++
Sbjct: 25  CFICXEKLRDARLCPHCSKLC-CFSCIRRWLTEQRAQCPHCRAPLQ 69


>pdb|4A4B|A Chain A, Structure Of Modified Phosphotyr371-C-Cbl-Ubch5b-Zap-70
           Complex
          Length = 391

 Score = 32.0 bits (71), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)

Query: 326 CVICMTEPKDTAVLPCRHMCMCGECAKELR-LQSNKCPICRQPIE 369
           C IC    KD  + PC H+ MC  C    +  +   CP CR  I+
Sbjct: 337 CKICAENDKDVKIEPCGHL-MCTSCLTSWQESEGQGCPFCRCEIK 380


>pdb|3VGO|A Chain A, Crystal Structure Of The N-Terminal Fragment Of Cbl-B
 pdb|3VGO|B Chain B, Crystal Structure Of The N-Terminal Fragment Of Cbl-B
 pdb|3VGO|C Chain C, Crystal Structure Of The N-Terminal Fragment Of Cbl-B
          Length = 394

 Score = 32.0 bits (71), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)

Query: 326 CVICMTEPKDTAVLPCRHMCMCGECAKELRLQSNK-CPICRQPIE 369
           C IC    KD  + PC H+ MC  C    +    + CP CR  I+
Sbjct: 341 CKICAENDKDVKIEPCGHL-MCTSCLTAWQESDGQGCPFCRCEIK 384


>pdb|4A4C|A Chain A, Structure Of Phosphotyr371-C-Cbl-Ubch5b-Zap-70 Complex
          Length = 391

 Score = 32.0 bits (71), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)

Query: 326 CVICMTEPKDTAVLPCRHMCMCGECAKELR-LQSNKCPICRQPIE 369
           C IC    KD  + PC H+ MC  C    +  +   CP CR  I+
Sbjct: 337 CKICAENDKDVKIEPCGHL-MCTSCLTSWQESEGQGCPFCRCEIK 380


>pdb|2Y1M|A Chain A, Structure Of Native C-Cbl
 pdb|2Y1M|B Chain B, Structure Of Native C-Cbl
 pdb|2Y1M|C Chain C, Structure Of Native C-Cbl
 pdb|2Y1M|D Chain D, Structure Of Native C-Cbl
 pdb|2Y1M|E Chain E, Structure Of Native C-Cbl
 pdb|2Y1M|F Chain F, Structure Of Native C-Cbl
 pdb|2Y1N|A Chain A, Structure Of C-Cbl-Zap-70 Peptide Complex
 pdb|2Y1N|C Chain C, Structure Of C-Cbl-Zap-70 Peptide Complex
          Length = 389

 Score = 31.6 bits (70), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)

Query: 326 CVICMTEPKDTAVLPCRHMCMCGECAKELR-LQSNKCPICRQPIE 369
           C IC    KD  + PC H+ MC  C    +  +   CP CR  I+
Sbjct: 335 CKICAENDKDVKIEPCGHL-MCTSCLTSWQESEGQGCPFCRCEIK 378


>pdb|1FBV|A Chain A, Structure Of A Cbl-Ubch7 Complex: Ring Domain Function In
           Ubiquitin-Protein Ligases
          Length = 388

 Score = 31.6 bits (70), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)

Query: 326 CVICMTEPKDTAVLPCRHMCMCGECAKELR-LQSNKCPICRQPIE 369
           C IC    KD  + PC H+ MC  C    +  +   CP CR  I+
Sbjct: 335 CKICAENDKDVKIEPCGHL-MCTSCLTSWQESEGQGCPFCRCEIK 378


>pdb|2ECN|A Chain A, Solution Structure Of The Ring Domain Of The Human Ring
           Finger Protein 141
          Length = 70

 Score = 30.4 bits (67), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 2/42 (4%)

Query: 324 KECVICMTEPKDTAVLPCRHMCMCGECAKELRLQSNKCPICR 365
           +EC ICM    D  +LPC H   C +C  +   +   CPICR
Sbjct: 16  EECCICMDGRADL-ILPCAHS-FCQKCIDKWSDRHRNCPICR 55


>pdb|3ZTG|A Chain A, Solution Structure Of The Ring Finger-Like Domain Of
           Retinoblastoma Binding Protein-6 (Rbbp6)
 pdb|3ZTG|B Chain B, Solution Structure Of The Ring Finger-Like Domain Of
           Retinoblastoma Binding Protein-6 (Rbbp6)
          Length = 92

 Score = 30.0 bits (66), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 2/43 (4%)

Query: 326 CVICMTEPKDTAVLPCRHMCMCGECAKELRLQSNK--CPICRQ 366
           C+IC     D  V+PC     C EC +   L+S++  CP C Q
Sbjct: 16  CLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCHQ 58


>pdb|2KIZ|A Chain A, Solution Structure Of Arkadia Ring-H2 Finger Domain
          Length = 69

 Score = 29.6 bits (65), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 4/48 (8%)

Query: 325 ECVICMT---EPKDTAVLPCRHMCMCGECAKELRLQSNKCPICRQPIE 369
           +C IC++   E +D   LPC H+     C  +  + + KCPICR  IE
Sbjct: 16  KCTICLSILEEGEDVRRLPCMHL-FHQVCVDQWLITNKKCPICRVDIE 62


>pdb|4EPO|C Chain C, Crystal Structure Of Rnf8 Bound To The Ubc13MMS2
           HETERODIMER
 pdb|4EPO|G Chain G, Crystal Structure Of Rnf8 Bound To The Ubc13MMS2
           HETERODIMER
 pdb|4EPO|H Chain H, Crystal Structure Of Rnf8 Bound To The Ubc13MMS2
           HETERODIMER
 pdb|4EPO|K Chain K, Crystal Structure Of Rnf8 Bound To The Ubc13MMS2
           HETERODIMER
 pdb|4EPO|L Chain L, Crystal Structure Of Rnf8 Bound To The Ubc13MMS2
           HETERODIMER
          Length = 149

 Score = 29.6 bits (65), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%)

Query: 325 ECVICMTEPKDTAVLPCRHMCMCGECAKELRLQSNKCPICRQPIE 369
           +C+IC     +   L C H   C  C  E   +  +CPICR+ I+
Sbjct: 66  QCIICSEYFIEAVTLNCAHS-FCSYCINEWMKRKIECPICRKDIK 109


>pdb|1IYM|A Chain A, Ring-H2 Finger Domain Of El5
          Length = 55

 Score = 29.6 bits (65), Expect = 3.0,   Method: Composition-based stats.
 Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 7/50 (14%)

Query: 321 DPGKECVICMTEPKDTAVLPCRHMCMCG-----ECAKELRLQSNKCPICR 365
           D G EC +C+ E +D      R +  CG     EC        + CP+CR
Sbjct: 3   DDGVECAVCLAELEDGE--EARFLPRCGHGFHAECVDMWLGSHSTCPLCR 50


>pdb|4AYC|B Chain B, Rnf8 Ring Domain Structure
          Length = 138

 Score = 29.3 bits (64), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 325 ECVICMTEPKDTAVLPCRHMCMCGECAKELRLQSNKCPICRQPI 368
           +C+IC     +   L C H   C  C  E   +  +CPICR+ I
Sbjct: 55  QCIICSEYFIEAVTLNCAHS-FCSYCINEWMKRKIECPICRKDI 97


>pdb|4AYC|A Chain A, Rnf8 Ring Domain Structure
          Length = 138

 Score = 28.9 bits (63), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 325 ECVICMTEPKDTAVLPCRHMCMCGECAKELRLQSNKCPICRQPI 368
           +C+IC     +   L C H   C  C  E   +  +CPICR+ I
Sbjct: 55  QCIICSEYFIEAVTLNCAHS-FCSYCINEWMKRKIECPICRKDI 97


>pdb|2K4D|A Chain A, E2-C-Cbl Recognition Is Necessary But Not Sufficient For
           Ubiquitination Activity
          Length = 83

 Score = 28.1 bits (61), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)

Query: 326 CVICMTEPKDTAVLPCRHMCMCGECAKELR-LQSNKCPICRQPIE 369
           C IC    KD  + PC H+ MC  C    +  +   CP CR  I+
Sbjct: 27  CKICAENDKDVKIEPCGHL-MCTSCLTSWQESEGQGCPFCRCEIK 70


>pdb|4A49|A Chain A, Structure Of Phosphotyr371-C-Cbl-Ubch5b Complex
          Length = 84

 Score = 28.1 bits (61), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)

Query: 326 CVICMTEPKDTAVLPCRHMCMCGECAKELR-LQSNKCPICRQPIE 369
           C IC    KD  + PC H+ MC  C    +  +   CP CR  I+
Sbjct: 30  CKICAENDKDVKIEPCGHL-MCTSCLTSWQESEGQGCPFCRCEIK 73


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.319    0.137    0.426 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,144,200
Number of Sequences: 62578
Number of extensions: 404452
Number of successful extensions: 736
Number of sequences better than 100.0: 42
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 705
Number of HSP's gapped (non-prelim): 44
length of query: 381
length of database: 14,973,337
effective HSP length: 101
effective length of query: 280
effective length of database: 8,652,959
effective search space: 2422828520
effective search space used: 2422828520
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)