Citrus Sinensis ID: 016901

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380
Protein Sequence
MEICSLQSQTLSTIPSPLSRNGLIVKSFGSCQILKFPSSKKFSHPRKLKLPDFKAQASGTINICSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPKESIAPEKSDPAASKSMISEESSAPITEEPVQTKAKVTDPLSPYTR
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEccccHHHHHHHHHHHHccccEEEEEccHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEcccccccHHHHHccccEEEEcccccccccccccccccccHHHHHHHHHHHHHccccEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccEEEEcccccccccccccccccEEEccccccccccccHHHHHHHHHHHHcccccccccEEEEEcccccccccHHHHHHccccccccccccccccccccHHHHcccccccccccccccHHHHHHHccccccccc
Secondary Structure Prediction (SSPRO)
cccEEcccccEEEcccccccccEEEcccccccEEEccccccccccccccccccccEEccccccHHHcccccHHHcccccccEEEEEEcccHHHHHHHHHHHHcccEEEEEEccHHHHHHHccccccEEEcccccccccccccccEEEEEccccHHHHHHHHccccEEEEEcccccccccccccccHccHHHHHHHHHHHHHccccEEEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccccccccccccccEEEEcccccccccccHHHHHHHHHHHHHccHHHHccEEEEEccccccccHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
meicslqsqtlstipsplsrnglivksfgscqilkfpsskkfshprklklpdfkaqasgtinicseavgatptkadskddnlaFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLdgelankgiqpveMLELVECDLEKRvqiepalgnaSVVICCIgasekevfditgpyridfqATKNLVDAATIAKVNHFIMVSslgtnkfgfpAAILNLFWGVLLWKRKAEEALIasglpytivrpggmerptdaykethnitlsqedtlfggqvSNLQVAELLACMAKNRSLSYCKVVEVIAettapltpMEELLAkipsqraepkesiapeksdpaasksmiseessapiteepvqtkakvtdplspytr
Flexible Loop (DISEMBL)
meicslqsqtlstipsplsrNGLIVKSFGSCQILKfpsskkfshprkLKLPDFKAQASGTINICSEAVGAtptkadskddNLAFVagatgkvgsrtvRELLKLgfrvragvrsvqraeNLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIasglpytivrpggMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIpsqraepkesiapeksdpaaskSMISEEssapiteepvqtkakvtdplspytr
Low Complexity Region (SEG)
MEICSLQSQTLSTIPSPLSRNGLIVKSFGSCQILKFPSSKKFSHPRKLKLPDFKAQASGTINICSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPKESIAPEKSDPAASKSMISEESSAPITEEPVQTKAKVTDPLSPYTR
Disordered region (IsUnstruct)
********************NGLIVKSFGSCQILKF**********************GTINICSEAV************NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGME***DAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPL***************************************************************
Disordered Region (DISOPRED)
**************PS******L***********************************************************AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRA*********MKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE*********SDPAASKSMISEE******************P******
Disordered Region (DISEMBL)
**********LSTIPSPLSRNGLIVKSFGSCQILKFPSSKKFSHPRKLKLPDFKAQASGTINICSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIP****************************************************
Disordered Region (DISPRO)
**ICSLQSQTLSTIPSPLSRNGLIVKSFGSCQILKFPSSKKFSHPRKLKLPDFKAQASGT*NI**************KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPS***************************************************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEICSLQSQTLSTIPSPLSRNGLIVKSFGSCQILKFPSSKKFSHPRKLKLPDFKAQASGTINICSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPKESIAPEKSDPAASKSMISEESSAPITEEPVQTKAKVTDPLSPYTR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	380	2.2.26 [Sep-21-2011]
Q8H0U5	641	Protein TIC 62, chloropla	yes	no	0.981	0.581	0.650	1e-135
Q8SKU2	534	Protein TIC 62, chloropla	N/A	no	0.973	0.692	0.621	1e-128
Q8H124	280	Uncharacterized protein A	no	no	0.592	0.803	0.355	2e-26
Q94EG6	253	Uncharacterized protein A	no	no	0.613	0.920	0.277	5e-11
O80934	325	Uncharacterized protein A	no	no	0.597	0.698	0.25	2e-10
P48279	321	Uncharacterized protein y	N/A	no	0.376	0.445	0.306	5e-08

>sp|Q8H0U5|TIC62_ARATH Protein TIC 62, chloroplastic OS=Arabidopsis thaliana GN=TIC62 PE=1 SV=1

 Score =  482 bits (1241), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 246/378 (65%), Positives = 293/378 (77%), Gaps = 5/378 (1%)

Query: 4   CSLQSQTLSTIPSPLSRNGLIVKSFGSCQILKFPSSKKFSHPRKLKLPDFKAQASGTINI 63
           C L+ Q L+TIPS  SR G +++ + + +I++F   K  S   K +  D   +ASG I  
Sbjct: 5   CFLRGQPLTTIPSLPSRKGFLLQRWKTNRIVRFSGFKNHSVSGKSRSFDLSLRASGPIRA 64

Query: 64  CSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQS 123
            S    A+PT  +SK+++L FVAGATGKVGSRTVRELLKLGFRVRAGVRS QRA +LVQS
Sbjct: 65  SSVVTEASPTNLNSKEEDLVFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAGSLVQS 124

Query: 124 VKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITG 183
           VK+MKL     ++G QPVE LE+VECDLEK+  I+PALGNASV+ICCIGASEKE+ DITG
Sbjct: 125 VKEMKLQN--TDEGTQPVEKLEIVECDLEKKDSIQPALGNASVIICCIGASEKEISDITG 182

Query: 184 PYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI 243
           PYRID+ ATKNLVDAAT AKVN+FI+V+SLGTNKFGFPAAILNLFWGVL WKRKAEEALI
Sbjct: 183 PYRIDYLATKNLVDAATSAKVNNFILVTSLGTNKFGFPAAILNLFWGVLCWKRKAEEALI 242

Query: 244 ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSY 303
            SGL Y IVRPGGMERPTDAYKETHN+TL+ +DTLFGGQVSNLQVAELLACMAKN  LS+
Sbjct: 243 ESGLNYAIVRPGGMERPTDAYKETHNLTLALDDTLFGGQVSNLQVAELLACMAKNPQLSF 302

Query: 304 CKVVEVIAETTAPLTPMEELLAKIPSQR---AEPKESIAPEKSDPAASKSMISEESSAPI 360
            K+VEV+AETTAPLTP+E+LL KIPS+R     PK S+A ++  P  +K +  E ++   
Sbjct: 303 SKIVEVVAETTAPLTPIEKLLEKIPSKRPYVPPPKASVATKEVKPVPTKPVTQEPTAPKE 362

Query: 361 TEEPVQTKAKVTDPLSPY 378
            E P + K     PLSPY
Sbjct: 363 DEAPPKEKNVKPRPLSPY 380

Involved in protein precursor import into chloroplasts. Part of the redox regulon consisting of TIC32, TIC 55 and TIC62. Acts as a membrane anchor of LFNR1 and LFNR2. Has a NADPH-dependent dehydrogenase activity, but only after preincubation with lipids.
Arabidopsis thaliana (taxid: 3702)

>sp|Q8SKU2|TIC62_PEA Protein TIC 62, chloroplastic OS=Pisum sativum GN=TIC62 PE=1 SV=2

 Score =  458 bits (1178), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 248/399 (62%), Positives = 290/399 (72%), Gaps = 29/399 (7%)

Query: 1   MEICSLQSQTLSTIPSPLSRNG---------LIVKSFGSCQILKFPSSKKFSHPR----K 47
           ME+ SL S   + IPS L+R           L +  +     +++P +   ++ R     
Sbjct: 3   MEVFSLTS---TAIPSTLTRRDTAADKPSPHLNLSKY--SHFMRYPLTTTLTNNRIRSSS 57

Query: 48  LKLPDFKAQASGTINICSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRV 107
                 +AQASG+    S      P K DSKDDNL FVAGATGKVGSRTVREL+KLGF+V
Sbjct: 58  SSSSSIRAQASGSTK--SSTAEGIPEKTDSKDDNLVFVAGATGKVGSRTVRELIKLGFKV 115

Query: 108 RAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVV 167
           RAGVR+ Q+A  LVQSVKQ+KLDG  A+ G + VE LE+VECDLEK  QI  ALGNAS V
Sbjct: 116 RAGVRNAQKAGALVQSVKQLKLDG--ASGGGEAVEKLEIVECDLEKADQIGSALGNASTV 173

Query: 168 ICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNL 227
           IC IGASEKE+FDITGP RID++ATKNLVDAAT+AKVNHFI+V+SLGTNKFG PAAILNL
Sbjct: 174 ICAIGASEKEIFDITGPCRIDYRATKNLVDAATVAKVNHFILVTSLGTNKFGLPAAILNL 233

Query: 228 FWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQ 287
           FWGVL+WKRKAEEAL+ASG+PYTIVRPGGMERPTDAYKETHN+TLS EDTLFGGQVSNLQ
Sbjct: 234 FWGVLIWKRKAEEALLASGIPYTIVRPGGMERPTDAYKETHNVTLSTEDTLFGGQVSNLQ 293

Query: 288 VAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPKESIAPEKSDPAA 347
           VAEL+A MAKN  LSYCK+VEVIAETTAPLTP E+LL +IPSQR         +K+D A 
Sbjct: 294 VAELMAIMAKNPDLSYCKIVEVIAETTAPLTPAEKLLTRIPSQRPYIPSPKKVQKADTAT 353

Query: 348 ------SKSMISEESS-APITEEPVQTKAKVTDPLSPYT 379
                 S ++++E  S AP  E   +  AK   PLSPYT
Sbjct: 354 VSNTGPSANVVAEVPSIAPQKETASKPVAKTEQPLSPYT 392

Involved in protein precursor import into chloroplasts. Part of the redox regulon consisting of TIC32, TIC 55 and TIC62. Has a NADPH-dependent dehydrogenase activity, but only after preincubation with lipids.

Pisum sativum (taxid: 3888)

>sp|Q8H124|Y2446_ARATH Uncharacterized protein At2g34460, chloroplastic OS=Arabidopsis thaliana GN=At2g34460 PE=1 SV=1

 Score =  120 bits (301), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/253 (35%), Positives = 132/253 (52%), Gaps = 28/253 (11%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
           FVAGATG+ G R V +LL  GF V+AGVR V++A+   +    +++      +G  P ++
Sbjct: 50  FVAGATGQTGKRIVEQLLSRGFAVKAGVRDVEKAKTSFKDDPSLQIVRADVTEG--PDKL 107

Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
            E++  D             +  VIC  G   +  FDI  P+++D   T NLVDA     
Sbjct: 108 AEVIGDD-------------SQAVICATGF--RPGFDIFTPWKVDNFGTVNLVDACRKQG 152

Query: 204 VNHFIMVSSLGTNKFGF-----PAAI-LNLFWGVLLWKRKAEEALIASGLPYTIVRPGGM 257
           V  F++VSS+  N         PA + LNLF   L+ K +AE+ +  SG+ YTIVRPGG+
Sbjct: 153 VEKFVLVSSILVNGAAMGQILNPAYLFLNLFGLTLVAKLQAEKYIKKSGINYTIVRPGGL 212

Query: 258 ERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPL 317
           +        T N+ +  EDTL+ G +S   VAE +A  A  +  S  KVVE++A   AP 
Sbjct: 213 KNDP----PTGNVVMEPEDTLYEGSISRDLVAE-VAVEALLQEESSFKVVEIVARAEAPK 267

Query: 318 TPMEELLAKIPSQ 330
              ++L A +  Q
Sbjct: 268 RSYKDLFASVKGQ 280

Arabidopsis thaliana (taxid: 3702)

>sp|Q94EG6|Y5224_ARATH Uncharacterized protein At5g02240 OS=Arabidopsis thaliana GN=At5g02240 PE=1 SV=1

 Score = 69.3 bits (168), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 113/259 (43%), Gaps = 26/259 (10%)

Query: 84  FVAGATGKVGSRTVRELLKLG---FRVRAGVRSVQRAENLVQSVKQMK---LDGELANKG 137
            V GA+G+ G + V + LK G   F  +  VRS Q  E +            D +  N  
Sbjct: 8   LVTGASGRTG-QIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPA 66

Query: 138 IQPVEMLELVECDLEK-RVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLV 196
            Q ++ L ++   + K +   +P  G     I   G           P ++D+   KN +
Sbjct: 67  FQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQY---------PEQVDWIGQKNQI 117

Query: 197 DAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGG 256
           DAA +A V H ++V S+G      P   L     +L+WKRKAE+ L  SG PYTI+R GG
Sbjct: 118 DAAKVAGVKHIVVVGSMGGTNPDHPLNKLG-NGNILVWKRKAEQYLADSGTPYTIIRAGG 176

Query: 257 MERPTDAYKE---THNITLSQED--TLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIA 311
           +       +E     +  L Q D  T+    V+ + +  LL   AKN++       E   
Sbjct: 177 LLDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPE--- 233

Query: 312 ETTAPLTPMEELLAKIPSQ 330
            T+ P    + L +++ S+
Sbjct: 234 GTSTPTKDFKALFSQVTSR 252

Arabidopsis thaliana (taxid: 3702)

>sp|O80934|Y2766_ARATH Uncharacterized protein At2g37660, chloroplastic OS=Arabidopsis thaliana GN=At2g37660 PE=1 SV=2

 Score = 67.4 bits (163), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 73/292 (25%), Positives = 119/292 (40%), Gaps = 65/292 (22%)

Query: 14  IPSPLSRNGLIVKSFGSCQILKFPSSKKFSHPRKLKLPDFKAQASGTINIC--------S 65
           +P+   ++G +  SF              S PR   L  F++  S + +IC        +
Sbjct: 16  LPANTYKSGAVASSF-------------VSVPRSSSL-QFRSLVSDSTSICGPSKFTGKN 61

Query: 66  EAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQS 123
             V  T + A + +     V GA G+ G    ++L +    F  R  VR+ +  E     
Sbjct: 62  RRVSVTVSAAATTEPLTVLVTGAGGRTGQIVYKKLKERSEQFVARGLVRTKESKE----- 116

Query: 124 VKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGA---------- 173
               K++GE            E+   D+     I PA+     ++    A          
Sbjct: 117 ----KINGED-----------EVFIGDIRDTASIAPAVEGIDALVILTSAVPQMKPGFDP 161

Query: 174 ---SEKEVFDITGPY--RIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFP-AAILNL 227
                 E F   G Y  ++D+   KN +DAA  A V   ++V S+G      P  +I N 
Sbjct: 162 SKGGRPEFFFDDGAYPEQVDWIGQKNQIDAAKAAGVKQIVLVGSMGGTNINHPLNSIGNA 221

Query: 228 FWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLF 279
              +L+WKRKAE+ L  SG+PYTI+R GG++      +E   + + ++D L 
Sbjct: 222 --NILVWKRKAEQYLADSGIPYTIIRAGGLQDKDGGIRE---LLVGKDDELL 268

Arabidopsis thaliana (taxid: 3702)

>sp|P48279|YCF39_CYAPA Uncharacterized protein ycf39 OS=Cyanophora paradoxa GN=ycf39 PE=3 SV=1

 Score = 59.3 bits (142), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 80/173 (46%), Gaps = 30/173 (17%)

Query: 85  VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML 144
           V GATG +G + VR  L  G++VR  VR++++A  L +   ++ + G+L+    QP  +L
Sbjct: 5   VIGATGTLGRQIVRSALDEGYQVRCLVRNLRKAAFLKEWGAKL-IWGDLS----QPESLL 59

Query: 145 ELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKV 204
                         PAL    V+I     S     D  G Y++D +  K L+DAA   K+
Sbjct: 60  --------------PALTGIRVII---DTSTSRPTDPAGVYQVDLKGKKALIDAAKAMKI 102

Query: 205 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGM 257
             FI  S L + K+     ++ +       K   EE L  SGL YTI +  G 
Sbjct: 103 EKFIFFSILNSEKYS-QVPLMRI-------KTVTEELLKESGLNYTIFKLCGF 147

Cyanophora paradoxa (taxid: 2762)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	380
255556137	584	NAD dependent epimerase/dehydratase, put	0.986	0.642	0.698	1e-151
224103467	564	predicted protein [Populus trichocarpa]	0.963	0.648	0.728	1e-151
225428568	529	PREDICTED: protein TIC 62, chloroplastic	0.984	0.706	0.704	1e-148
224080277	517	predicted protein [Populus trichocarpa]	0.986	0.725	0.722	1e-148
147770508	535	hypothetical protein VITISV_033052 [Viti	0.984	0.699	0.667	1e-145
30685117	641	Rossmann-fold NAD(P)-binding domain-cont	0.981	0.581	0.650	1e-133
297830550	668	catalytic/ coenzyme binding protein [Ara	0.981	0.558	0.650	1e-133
356545313	528	PREDICTED: uncharacterized protein LOC10	0.981	0.706	0.652	1e-131
356541105	529	PREDICTED: uncharacterized protein LOC10	0.981	0.705	0.645	1e-131
9294698	649	unnamed protein product [Arabidopsis tha	0.981	0.574	0.634	1e-130

>gi|255556137|ref|XP_002519103.1| NAD dependent epimerase/dehydratase, putative [Ricinus communis] gi|223541766|gb|EEF43314.1| NAD dependent epimerase/dehydratase, putative [Ricinus communis]

 Score =  541 bits (1394), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 266/381 (69%), Positives = 309/381 (81%), Gaps = 6/381 (1%)

Query: 1   MEICSLQSQTLSTIPSPLSRNGLIVKSFGSCQILKFPSSKKFSHPRKLKLPDFKAQASGT 60
           ME  SLQS  ++TIP+ L+++G + K+F   Q+++F S  K+ H RK++    KAQASG 
Sbjct: 1   MERYSLQSSAITTIPTSLTKSGFLHKTFLHGQLIRFSSFSKYPHARKIRTFGIKAQASGV 60

Query: 61  INICSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL 120
               S A+ A P + D KDDNLAFVAGATG+VGSRTVRELLKLGF+VRAGVRS QRA+ L
Sbjct: 61  TKFSSGAIEAIPKETDIKDDNLAFVAGATGRVGSRTVRELLKLGFQVRAGVRSAQRAQTL 120

Query: 121 VQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFD 180
           VQSVKQMKLDGE    G QP+E  E++ECDL+K  +I  ALGNAS+VICCIGA EKEVFD
Sbjct: 121 VQSVKQMKLDGE----GAQPIEKFEIIECDLDKPNEIGAALGNASIVICCIGAGEKEVFD 176

Query: 181 ITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEE 240
            TGPYRID+QAT+NL+DAAT+AKV HFIMVSSLGTNK GFPAAILNLFWGVL WKRKAEE
Sbjct: 177 FTGPYRIDYQATRNLIDAATVAKVKHFIMVSSLGTNKVGFPAAILNLFWGVLFWKRKAEE 236

Query: 241 ALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRS 300
           ALIASG+PYTIVRPGGMERPTDAYKETHNITLS+EDTLFGGQVSNLQVAEL+A MAKN  
Sbjct: 237 ALIASGIPYTIVRPGGMERPTDAYKETHNITLSEEDTLFGGQVSNLQVAELMAVMAKNLD 296

Query: 301 LSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPKESIAPEKSDPAASKSMISE--ESSA 358
           LSYCKVVEVIAETTAPLT M++LL +IPSQR +PKE  A E  +PA S  ++ E  E ++
Sbjct: 297 LSYCKVVEVIAETTAPLTTMDKLLTRIPSQRIKPKEPAAAEGPEPAPSTKVVPEASEPTS 356

Query: 359 PITEEPVQTKAKVTDPLSPYT 379
            I +EP Q KA V+ PLSPYT
Sbjct: 357 AIEKEPEQPKATVSRPLSPYT 377

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224103467|ref|XP_002313068.1| predicted protein [Populus trichocarpa] gi|222849476|gb|EEE87023.1| predicted protein [Populus trichocarpa]

 Score =  540 bits (1390), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 276/379 (72%), Positives = 305/379 (80%), Gaps = 13/379 (3%)

Query: 1   MEICSLQSQTLSTIPSPLSRNGLIVKSFGSCQILKFPSSKKFSHPRKLKLPDFKAQASGT 60
           ME CSLQS  ++TIP+ L++ G I K     Q LKFP+  KF+H RKLK+ D KAQAS  
Sbjct: 1   MESCSLQSSAITTIPTSLTKCGFIEKPSIHGQFLKFPNLSKFAHSRKLKILDIKAQAS-- 58

Query: 61  INICSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL 120
                  V A   + ++KD+NLAFVAGATGKVGSR VRELLKLGFRVRAGVRS Q+AE L
Sbjct: 59  -------VEAISKEMETKDENLAFVAGATGKVGSRAVRELLKLGFRVRAGVRSAQKAEAL 111

Query: 121 VQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFD 180
            QSVK+MKLD E    G QPVE LE VECDLEK  QI PALGNASVV+CCIGASEKEVFD
Sbjct: 112 AQSVKEMKLDVE----GSQPVERLETVECDLEKPNQIGPALGNASVVLCCIGASEKEVFD 167

Query: 181 ITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEE 240
           +TGP RID++ATKNLVDAAT+AKV+HFIMVSSLGTNKFGFPAAILNLFWGVL+WKRKAEE
Sbjct: 168 VTGPCRIDYRATKNLVDAATVAKVDHFIMVSSLGTNKFGFPAAILNLFWGVLIWKRKAEE 227

Query: 241 ALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRS 300
           ALIASG+PYTIVRPGGMERPTDAYKETHN+T+S+EDTLFGGQVSNLQVAE +A MAKNR 
Sbjct: 228 ALIASGVPYTIVRPGGMERPTDAYKETHNLTVSEEDTLFGGQVSNLQVAEFMAFMAKNRG 287

Query: 301 LSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPKESIAPEKSDPAASKSMISEESSAPI 360
           LSYCKVVEVIAETTAPLTPM+ELLAKIPSQR EPK+S A E       K +  E  S P 
Sbjct: 288 LSYCKVVEVIAETTAPLTPMDELLAKIPSQRVEPKKSDAAELPKSVPPKIVEPEAPSPPS 347

Query: 361 TEEPVQTKAKVTDPLSPYT 379
             EP Q KA VT PLSPYT
Sbjct: 348 QREPAQAKAVVTRPLSPYT 366

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225428568|ref|XP_002284662.1| PREDICTED: protein TIC 62, chloroplastic isoform 1 [Vitis vinifera] gi|297741413|emb|CBI32544.3| unnamed protein product [Vitis vinifera]

 Score =  531 bits (1367), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 269/382 (70%), Positives = 306/382 (80%), Gaps = 8/382 (2%)

Query: 1   MEICSLQSQTLSTIPSPLSRNGLIVKSFGSCQILKFPSSKKFSHPRKLKLPDFKAQASGT 60
           ME+ SLQS T+++IP      G I K F   Q+L+ PSS++    RKL + +F+AQA+GT
Sbjct: 1   MELRSLQSPTVTSIPKLNRSGGFIEKPFLCGQVLRLPSSRRCPDSRKLTVLEFRAQATGT 60

Query: 61  INICSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL 120
                  +GA   KAD KD++LAFVAGATG+VGSRTVRELLKLGFRVRAGVR+ Q+AE L
Sbjct: 61  TKFSFSTIGAIQDKADLKDEDLAFVAGATGRVGSRTVRELLKLGFRVRAGVRTAQKAEAL 120

Query: 121 VQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFD 180
           +QSVKQMKLD E A++G QPVE LE+VECDLEKR QI PALGNASVVICCIGASEKEVFD
Sbjct: 121 IQSVKQMKLDVESASEGTQPVEKLEIVECDLEKRDQIGPALGNASVVICCIGASEKEVFD 180

Query: 181 ITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEE 240
           ITGPYRID+ ATKNL+DAAT+AKVNHFI+++SLGTNK GFPAAILNLFWGVL+WKRKAEE
Sbjct: 181 ITGPYRIDYMATKNLIDAATVAKVNHFILLTSLGTNKVGFPAAILNLFWGVLIWKRKAEE 240

Query: 241 ALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRS 300
           AL ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAEL+A MAKNR 
Sbjct: 241 ALFASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELIAFMAKNRG 300

Query: 301 LSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPKESIAPEKSDPA----ASKSMISEES 356
            SYCKVVEVIAETTAPLTP  ELLAKIPSQR +    ++P++SD A        +     
Sbjct: 301 SSYCKVVEVIAETTAPLTPFGELLAKIPSQRVD----VSPKESDAADGPAPVPVVSGPPP 356

Query: 357 SAPITEEPVQTKAKVTDPLSPY 378
           S PI + P Q KA    PLSPY
Sbjct: 357 STPIEKGPPQGKATAMSPLSPY 378

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224080277|ref|XP_002306080.1| predicted protein [Populus trichocarpa] gi|222849044|gb|EEE86591.1| predicted protein [Populus trichocarpa]

 Score =  530 bits (1366), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 274/379 (72%), Positives = 302/379 (79%), Gaps = 4/379 (1%)

Query: 1   MEICSLQSQTLSTIPSPLSRNGLIVKSFGSCQILKFPSSKKFSHPRKLKLPDFKAQASGT 60
           ME   LQS  ++TIP+ L++ G I KS    Q+LKFP   KF H RKLK+ D KAQAS  
Sbjct: 1   MEGGCLQSSAITTIPTSLTKCGFIEKSCIHGQLLKFPHFNKFPHSRKLKILDIKAQASVA 60

Query: 61  INICSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL 120
               S AV A   + ++KD+NLAFVAGATGKVGSR VRELLKLGFRVRAGVRS Q+AE L
Sbjct: 61  AKFRSGAVEADSKEVETKDENLAFVAGATGKVGSRAVRELLKLGFRVRAGVRSAQKAEAL 120

Query: 121 VQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFD 180
           VQSV  MKLD E    G QPVE L++VECDLEK  QI PALGNASV++CCIGA EKEVFD
Sbjct: 121 VQSVMAMKLDVE----GSQPVERLDIVECDLEKPNQIGPALGNASVLLCCIGAGEKEVFD 176

Query: 181 ITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEE 240
           +TGPYRID+ ATKNLVDAAT  KVNHFIMVSSLGTNK GFPAAILNLFWGVL+WKRKAEE
Sbjct: 177 VTGPYRIDYLATKNLVDAATATKVNHFIMVSSLGTNKVGFPAAILNLFWGVLIWKRKAEE 236

Query: 241 ALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRS 300
           ALIASG+PYTIVRPGGMERPTDAYKETHNITLS+EDTLFGG VSNLQVAEL+A MA NR 
Sbjct: 237 ALIASGVPYTIVRPGGMERPTDAYKETHNITLSEEDTLFGGLVSNLQVAELMAFMANNRR 296

Query: 301 LSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPKESIAPEKSDPAASKSMISEESSAPI 360
           LSYCKVVEVIAETTAPLTPM+ELLAKIPSQR EPKE  A +   P   K +  +  S+P 
Sbjct: 297 LSYCKVVEVIAETTAPLTPMDELLAKIPSQRVEPKEPEAADVPKPVPPKVVEPKAPSSPS 356

Query: 361 TEEPVQTKAKVTDPLSPYT 379
            +EP Q KA VT PLSPYT
Sbjct: 357 QKEPAQAKAMVTRPLSPYT 375

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147770508|emb|CAN75677.1| hypothetical protein VITISV_033052 [Vitis vinifera]

 Score =  519 bits (1337), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 269/403 (66%), Positives = 306/403 (75%), Gaps = 29/403 (7%)

Query: 1   MEICSLQSQTLSTIPSPLSRNGLIVKSFGSCQILKFPSSKKFSHPRKLKLPDFKAQASGT 60
           ME+ SLQS T+++IP      G I K F   Q+L+ PSS++    RKL + +F+AQA+GT
Sbjct: 1   MELRSLQSPTVTSIPKLNRSGGFIEKPFLCGQVLRLPSSRRCPDSRKLTVLEFRAQATGT 60

Query: 61  INICSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL 120
                  +GA   KAD KD++LAFVAGATG+VGSRTVRELLKLGFRVRAGVR+ Q+AE L
Sbjct: 61  TKFSFSTIGAIQDKADLKDEDLAFVAGATGRVGSRTVRELLKLGFRVRAGVRTAQKAEAL 120

Query: 121 VQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFD 180
           +QSVKQMKLD E A++G QPVE LE+VECDLEKR QI PALGNASVVICCIGASEKEVFD
Sbjct: 121 IQSVKQMKLDVESASEGTQPVEKLEIVECDLEKRDQIGPALGNASVVICCIGASEKEVFD 180

Query: 181 ITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEE 240
           ITGPYRID+ ATKNL+DAAT+AKVNHFI+++SLGTNK GFPAAILNLFWGVL+WKRKAEE
Sbjct: 181 ITGPYRIDYMATKNLIDAATVAKVNHFILLTSLGTNKVGFPAAILNLFWGVLIWKRKAEE 240

Query: 241 ALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNL-------------- 286
           AL ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNL              
Sbjct: 241 ALFASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQMQTWLKKLNATPK 300

Query: 287 -------QVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPKESIA 339
                  QVAEL+A MAKNR  SYCKVVEVIAETTAPLTP  ELLAKIPSQR +    ++
Sbjct: 301 VTFVNKFQVAELIAFMAKNRGSSYCKVVEVIAETTAPLTPFGELLAKIPSQRVD----VS 356

Query: 340 PEKSDPA----ASKSMISEESSAPITEEPVQTKAKVTDPLSPY 378
           P++SD A        +     S PI + P Q KA    PLSPY
Sbjct: 357 PKESDAADGPXPVPVVSGPPPSTPIEKGPPQGKATAMSPLSPY 399

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30685117|ref|NP_188519.2| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gi|75151827|sp|Q8H0U5.1|TIC62_ARATH RecName: Full=Protein TIC 62, chloroplastic; AltName: Full=Translocon at the inner envelope membrane of chloroplasts 62; Short=AtTIC62; Flags: Precursor gi|25083201|gb|AAN72050.1| Unknown protein [Arabidopsis thaliana] gi|30725480|gb|AAP37762.1| At3g18890 [Arabidopsis thaliana] gi|332642643|gb|AEE76164.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana]

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 246/378 (65%), Positives = 293/378 (77%), Gaps = 5/378 (1%)

Query: 4   CSLQSQTLSTIPSPLSRNGLIVKSFGSCQILKFPSSKKFSHPRKLKLPDFKAQASGTINI 63
           C L+ Q L+TIPS  SR G +++ + + +I++F   K  S   K +  D   +ASG I  
Sbjct: 5   CFLRGQPLTTIPSLPSRKGFLLQRWKTNRIVRFSGFKNHSVSGKSRSFDLSLRASGPIRA 64

Query: 64  CSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQS 123
            S    A+PT  +SK+++L FVAGATGKVGSRTVRELLKLGFRVRAGVRS QRA +LVQS
Sbjct: 65  SSVVTEASPTNLNSKEEDLVFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAGSLVQS 124

Query: 124 VKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITG 183
           VK+MKL     ++G QPVE LE+VECDLEK+  I+PALGNASV+ICCIGASEKE+ DITG
Sbjct: 125 VKEMKLQN--TDEGTQPVEKLEIVECDLEKKDSIQPALGNASVIICCIGASEKEISDITG 182

Query: 184 PYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI 243
           PYRID+ ATKNLVDAAT AKVN+FI+V+SLGTNKFGFPAAILNLFWGVL WKRKAEEALI
Sbjct: 183 PYRIDYLATKNLVDAATSAKVNNFILVTSLGTNKFGFPAAILNLFWGVLCWKRKAEEALI 242

Query: 244 ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSY 303
            SGL Y IVRPGGMERPTDAYKETHN+TL+ +DTLFGGQVSNLQVAELLACMAKN  LS+
Sbjct: 243 ESGLNYAIVRPGGMERPTDAYKETHNLTLALDDTLFGGQVSNLQVAELLACMAKNPQLSF 302

Query: 304 CKVVEVIAETTAPLTPMEELLAKIPSQR---AEPKESIAPEKSDPAASKSMISEESSAPI 360
            K+VEV+AETTAPLTP+E+LL KIPS+R     PK S+A ++  P  +K +  E ++   
Sbjct: 303 SKIVEVVAETTAPLTPIEKLLEKIPSKRPYVPPPKASVATKEVKPVPTKPVTQEPTAPKE 362

Query: 361 TEEPVQTKAKVTDPLSPY 378
            E P + K     PLSPY
Sbjct: 363 DEAPPKEKNVKPRPLSPY 380

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297830550|ref|XP_002883157.1| catalytic/ coenzyme binding protein [Arabidopsis lyrata subsp. lyrata] gi|297328997|gb|EFH59416.1| catalytic/ coenzyme binding protein [Arabidopsis lyrata subsp. lyrata]

 Score =  479 bits (1234), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 246/378 (65%), Positives = 290/378 (76%), Gaps = 5/378 (1%)

Query: 4   CSLQSQTLSTIPSPLSRNGLIVKSFGSCQILKFPSSKKFSHPRKLKLPDFKAQASGTINI 63
           C L+ Q L+TIPS  SR G +++ + + +I++F   K  S   K +  D   +ASG I  
Sbjct: 5   CFLRGQPLTTIPSLPSRKGFLLQRWKTNRIVRFSGLKNHSVSGKSRSFDLSIRASGPIRA 64

Query: 64  CSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQS 123
            S    A P   +SK+D+L FVAGATGKVGSRTVRELLKLGFRVRAGVRS QRA +LVQS
Sbjct: 65  SSAVTEANPANLNSKEDDLVFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAGSLVQS 124

Query: 124 VKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITG 183
           VK+MKL     ++G QPVE LE+VECDLEK+  I+PALGNASV+ICCIGASEKE+ DITG
Sbjct: 125 VKEMKLQN--TDEGAQPVEKLEIVECDLEKKDSIQPALGNASVIICCIGASEKEISDITG 182

Query: 184 PYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI 243
           PYRID+ ATKNLVDAAT AKVN+FI+V+SLGTNKFG PAAILNLFWGVL WKRKAEEALI
Sbjct: 183 PYRIDYLATKNLVDAATSAKVNNFILVTSLGTNKFGLPAAILNLFWGVLCWKRKAEEALI 242

Query: 244 ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSY 303
           ASGL Y IVRPGGMERPTDAYKETHN+TLS +DTLFGGQVSNLQVAELLACMAKN  LS+
Sbjct: 243 ASGLNYAIVRPGGMERPTDAYKETHNLTLSLDDTLFGGQVSNLQVAELLACMAKNPQLSF 302

Query: 304 CKVVEVIAETTAPLTPMEELLAKIPSQR---AEPKESIAPEKSDPAASKSMISEESSAPI 360
            K+VEV+AETTAPLT +E+LL KIPS+R     PK S+A ++  P  +K +  E ++   
Sbjct: 303 SKIVEVVAETTAPLTSIEKLLEKIPSKRPYVPPPKASVAAKEVKPVPTKPVTQEPTAPKE 362

Query: 361 TEEPVQTKAKVTDPLSPY 378
            E P + K     PLSPY
Sbjct: 363 DEAPPKEKDVKPRPLSPY 380

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356545313|ref|XP_003541088.1| PREDICTED: uncharacterized protein LOC100779056 [Glycine max]

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 252/386 (65%), Positives = 292/386 (75%), Gaps = 13/386 (3%)

Query: 1   MEICSLQSQTLSTIPSPLSRNGLIVKSFGSCQI-----LKFPSSKKFSHPRKLKLPDFKA 55
           ME  S+QS T +TIPS LSR G   K   +  +     +++P + + +   K K+   +A
Sbjct: 1   MEAFSVQSLTATTIPSSLSRRGATDKPSATSHVNLSHFMRYPCTTRST---KQKILCTRA 57

Query: 56  QASGTINICSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ 115
           QASG+    + +      K DSKDDNL FVAGATG+VGSRTVREL+KLGFRVRAGVRS Q
Sbjct: 58  QASGSTKSSTGSAEGISEKTDSKDDNLVFVAGATGRVGSRTVRELIKLGFRVRAGVRSAQ 117

Query: 116 RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASE 175
           RA  LVQSV+Q+KLDG  A+ G Q VE LE+VECDLEK   I  ALG+AS VIC IGASE
Sbjct: 118 RAGALVQSVEQLKLDG--ASGGGQAVEKLEIVECDLEKPETIGSALGDASTVICSIGASE 175

Query: 176 KEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWK 235
           KEVFDITGP+RID+QATKNL+DAAT+AKVNHFI+V+SLGTNK GFPAAILNLFWGVL+WK
Sbjct: 176 KEVFDITGPFRIDYQATKNLIDAATVAKVNHFILVTSLGTNKIGFPAAILNLFWGVLVWK 235

Query: 236 RKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACM 295
           RKAEEAL+ASGLPYTIVRPGGMERPTDA+KETHNITLS EDTLFGG VSNLQ+AELLA M
Sbjct: 236 RKAEEALLASGLPYTIVRPGGMERPTDAFKETHNITLSTEDTLFGGLVSNLQIAELLAVM 295

Query: 296 AKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR---AEPKESIAPEKSDPAASKSMI 352
           AKNR LSYCK+VE IAETTAPLTPMEELLAKIPSQR   + PK+      S P    +++
Sbjct: 296 AKNRDLSYCKIVEAIAETTAPLTPMEELLAKIPSQRPYISSPKKPDIAAVSVPDPPANVV 355

Query: 353 SEESSAPITEEPVQTKAKVTDPLSPY 378
           + E      +E  Q K     PLSPY
Sbjct: 356 TVEPKVATQQETAQPKPVAKQPLSPY 381

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356541105|ref|XP_003539023.1| PREDICTED: uncharacterized protein LOC100802919 [Glycine max]

 Score =  473 bits (1216), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 250/387 (64%), Positives = 288/387 (74%), Gaps = 14/387 (3%)

Query: 1   MEICSLQSQTLSTIP-SPLSRNGLIVKSFGSCQILKFPSSKKFSHPRKLKLPDFKAQASG 59
           ME  S+QS T +TIP S LSR     K   +  +       ++    K K+   +AQASG
Sbjct: 1   MEAFSVQSLTATTIPTSSLSRRAATDKPSATSHV-NLSHFTRYPCTTKHKIRCTRAQASG 59

Query: 60  TINICSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAEN 119
           +   C+        K DSKDDNL FVAGATG+VGSRTVREL+KLGFRVRAGVRS QRA  
Sbjct: 60  STKSCTGTAEGISEKTDSKDDNLVFVAGATGRVGSRTVRELIKLGFRVRAGVRSAQRAGA 119

Query: 120 LVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVF 179
           LVQSV+Q+KLDG  AN G+Q VE LE+VECDLEK   I  ALGNAS VIC IGASEKEVF
Sbjct: 120 LVQSVEQLKLDG--ANGGVQAVEKLEIVECDLEKPETIGSALGNASTVICSIGASEKEVF 177

Query: 180 DITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAE 239
           DITGP+RID+ ATKNL+DAAT+ KVNHFI+V+SLGTNK GFPAAILNLFWGVL+WKRKAE
Sbjct: 178 DITGPFRIDYLATKNLIDAATVTKVNHFILVTSLGTNKIGFPAAILNLFWGVLVWKRKAE 237

Query: 240 EALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNR 299
           EAL+ASGLPYTIVRPGGMERPTDA+KETHNITLS EDTLFGG VSNLQ+AELLA MAKNR
Sbjct: 238 EALLASGLPYTIVRPGGMERPTDAFKETHNITLSTEDTLFGGLVSNLQIAELLAVMAKNR 297

Query: 300 SLSYCKVVEVIAETTAPLTPMEELLAKIPSQR---AEPKESIAPEKS-----DPAASKSM 351
            LSYCK+VE IAETT+PLTPME LLA+IPSQR   + PK    P+ +     DP A  ++
Sbjct: 298 DLSYCKIVEAIAETTSPLTPMEGLLARIPSQRPYISSPKVIQKPDIAVVSIPDPPA--NV 355

Query: 352 ISEESSAPITEEPVQTKAKVTDPLSPY 378
           +++E      +E  Q K     PLSPY
Sbjct: 356 VAKEPKVATQQETAQPKPVANQPLSPY 382

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|9294698|dbj|BAB03098.1| unnamed protein product [Arabidopsis thaliana]

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 245/386 (63%), Positives = 292/386 (75%), Gaps = 13/386 (3%)

Query: 4   CSLQSQTLSTIPSPLSRNGLIVKSFGSCQILKFPSSKKFSHPRKLKLPDFKAQASGTINI 63
           C L+ Q L+TIPS  SR G +++ + + +I++F   K  S   K +  D   +ASG I  
Sbjct: 5   CFLRGQPLTTIPSLPSRKGFLLQRWKTNRIVRFSGFKNHSVSGKSRSFDLSLRASGPIRA 64

Query: 64  CSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQS 123
            S    A+PT  +SK+++L FVAGATGKVGSRTVRELLKLGFRVRAGVRS QRA +LVQS
Sbjct: 65  SSVVTEASPTNLNSKEEDLVFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAGSLVQS 124

Query: 124 VKQMKLDGELANKGIQ--------PVEMLELVECDLEKRVQIEPALGNASVVICCIGASE 175
           VK+MKL     ++G Q         VE LE+VECDLEK+  I+PALGNASV+ICCIGASE
Sbjct: 125 VKEMKLQN--TDEGTQRSVCVFSPAVEKLEIVECDLEKKDSIQPALGNASVIICCIGASE 182

Query: 176 KEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWK 235
           KE+ DITGPYRID+ ATKNLVDAAT AKVN+FI+V+SLGTNKFGFPAAILNLFWGVL WK
Sbjct: 183 KEISDITGPYRIDYLATKNLVDAATSAKVNNFILVTSLGTNKFGFPAAILNLFWGVLCWK 242

Query: 236 RKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACM 295
           RKAEEALI SGL Y IVRPGGMERPTDAYKETHN+TL+ +DTLFGGQVSNLQVAELLACM
Sbjct: 243 RKAEEALIESGLNYAIVRPGGMERPTDAYKETHNLTLALDDTLFGGQVSNLQVAELLACM 302

Query: 296 AKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR---AEPKESIAPEKSDPAASKSMI 352
           AKN  LS+ K+VEV+AETTAPLTP+E+LL KIPS+R     PK S+A ++  P  +K + 
Sbjct: 303 AKNPQLSFSKIVEVVAETTAPLTPIEKLLEKIPSKRPYVPPPKASVATKEVKPVPTKPVT 362

Query: 353 SEESSAPITEEPVQTKAKVTDPLSPY 378
            E ++    E P + K     PLSPY
Sbjct: 363 QEPTAPKEDEAPPKEKNVKPRPLSPY 388

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	380
TAIR|locus:2087901	641	Tic62 "translocon at the inner	0.978	0.580	0.654	5.7e-124
TAIR|locus:2040854	280	AT2G34460 [Arabidopsis thalian	0.589	0.8	0.314	3.7e-19
TAIR|locus:2102842	510	PTAC16 "plastid transcriptiona	0.802	0.598	0.277	1.1e-17
TAIR|locus:2185228	253	AT5G02240 [Arabidopsis thalian	0.610	0.916	0.279	7.1e-12
TAIR|locus:2040716	325	AT2G37660 [Arabidopsis thalian	0.721	0.843	0.246	1.5e-11
TAIR|locus:2180019	417	PCB2 "PALE-GREEN AND CHLOROPHY	0.810	0.738	0.267	6.3e-08
UNIPROTKB|Q71X34	209	LMOf2365_2365 "Putative unchar	0.176	0.320	0.375	0.00036

TAIR|locus:2087901 Tic62 "translocon at the inner envelope membrane of chloroplasts 62" [Arabidopsis thaliana (taxid:3702)]

 Score = 1202 (428.2 bits), Expect = 5.7e-124, Sum P(2) = 5.7e-124
 Identities = 248/379 (65%), Positives = 297/379 (78%)

Query:     4 CSLQSQTLSTIPSPLSRNGLIVKSFGSCQILKFPSSKKFSHPRKLKLPDFKAQASGTINI 63
             C L+ Q L+TIPS  SR G +++ + + +I++F   K  S   K +  D   +ASG I  
Sbjct:     5 CFLRGQPLTTIPSLPSRKGFLLQRWKTNRIVRFSGFKNHSVSGKSRSFDLSLRASGPIRA 64

Query:    64 CSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQS 123
              S    A+PT  +SK+++L FVAGATGKVGSRTVRELLKLGFRVRAGVRS QRA +LVQS
Sbjct:    65 SSVVTEASPTNLNSKEEDLVFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAGSLVQS 124

Query:   124 VKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITG 183
             VK+MKL     ++G QPVE LE+VECDLEK+  I+PALGNASV+ICCIGASEKE+ DITG
Sbjct:   125 VKEMKLQN--TDEGTQPVEKLEIVECDLEKKDSIQPALGNASVIICCIGASEKEISDITG 182

Query:   184 PYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI 243
             PYRID+ ATKNLVDAAT AKVN+FI+V+SLGTNKFGFPAAILNLFWGVL WKRKAEEALI
Sbjct:   183 PYRIDYLATKNLVDAATSAKVNNFILVTSLGTNKFGFPAAILNLFWGVLCWKRKAEEALI 242

Query:   244 ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSY 303
              SGL Y IVRPGGMERPTDAYKETHN+TL+ +DTLFGGQVSNLQVAELLACMAKN  LS+
Sbjct:   243 ESGLNYAIVRPGGMERPTDAYKETHNLTLALDDTLFGGQVSNLQVAELLACMAKNPQLSF 302

Query:   304 CKVVEVIAETTAPLTPMEELLAKIPSQRA---EPKESIAPEKSDPAASKSMISEESSAPI 360
              K+VEV+AETTAPLTP+E+LL KIPS+R     PK S+A ++  P  +K  +++E +AP 
Sbjct:   303 SKIVEVVAETTAPLTPIEKLLEKIPSKRPYVPPPKASVATKEVKPVPTKP-VTQEPTAPK 361

Query:   361 TEE-PVQTKAKVTDPLSPY 378
              +E P + K     PLSPY
Sbjct:   362 EDEAPPKEKNVKPRPLSPY 380

GO:0000166 "nucleotide binding" evidence=IEA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0010103 "stomatal complex morphogenesis" evidence=RCA

GO:0016556 "mRNA modification" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

TAIR|locus:2040854 AT2G34460 [Arabidopsis thaliana (taxid:3702)]

 Score = 232 (86.7 bits), Expect = 3.7e-19, P = 3.7e-19
 Identities = 80/254 (31%), Positives = 123/254 (48%)

Query:    84 FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
             FVAGATG+ G R V +LL  GF V+AGVR V++A+   +    +++      +G  P ++
Sbjct:    50 FVAGATGQTGKRIVEQLLSRGFAVKAGVRDVEKAKTSFKDDPSLQIVRADVTEG--PDKL 107

Query:   144 LELVECDLEKRVQIEPALGNASVVICCIGASEK-EVF-----DITGPYRIDFQATKNLVD 197
              E++  D             +  VIC  G     ++F     D  G   +     K  V+
Sbjct:   108 AEVIGDD-------------SQAVICATGFRPGFDIFTPWKVDNFGTVNLVDACRKQGVE 154

Query:   198 AATIAKVNHFIMVSSLGTNKFGFPAAI-LNLFWGVLLWKRKAEEALIASGLPYTIVRPGG 256
                +      I+V+     +   PA + LNLF   L+ K +AE+ +  SG+ YTIVRPGG
Sbjct:   155 KFVLVSS---ILVNGAAMGQILNPAYLFLNLFGLTLVAKLQAEKYIKKSGINYTIVRPGG 211

Query:   257 MERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAP 316
             ++        T N+ +  EDTL+ G +S   VAE+ A  A  +  S  KVVE++A   AP
Sbjct:   212 LKNDPP----TGNVVMEPEDTLYEGSISRDLVAEV-AVEALLQEESSFKVVEIVARAEAP 266

Query:   317 LTPMEELLAKIPSQ 330
                 ++L A +  Q
Sbjct:   267 KRSYKDLFASVKGQ 280

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0010287 "plastoglobule" evidence=IDA

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0010264 "myo-inositol hexakisphosphate biosynthetic process" evidence=RCA

TAIR|locus:2102842 PTAC16 "plastid transcriptionally active 16" [Arabidopsis thaliana (taxid:3702)]

 Score = 239 (89.2 bits), Expect = 1.1e-17, P = 1.1e-17
 Identities = 96/346 (27%), Positives = 163/346 (47%)

Query:    49 KLPDFKAQASGTINICSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVR 108
             KLPD K+      N  +  V     K   KD    FVAGATG+ G R  + LL+ GF VR
Sbjct:    63 KLPDMKSLIPVVTNPSTGLVFGNNRK---KDPGTIFVAGATGQAGIRIAQTLLQRGFSVR 119

Query:   109 AGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVI 168
             AGV  +  A++L +     K+   L+N     V+ L  V+   +    I  A+GNA+ V+
Sbjct:   120 AGVPDLGAAQDLARVAATYKI---LSN---DEVKRLNAVQSPFQDAESIAKAIGNATKVV 173

Query:   169 CCIGASEKEVFDITGP-YRIDFQATKNLVDAATIAKVNHFIMV--SSLGTNKFGFPAAIL 225
               +GA+E       GP  ++       +V AA +A V+H  +V   ++  + +     I 
Sbjct:   174 VTVGATEN------GPDAQVSTSDALLVVQAAELAGVSHVAIVYDGTISGSTYNVLDGIT 227

Query:   226 NLFWGVLLWKRKAE------EALIASGLPYTIVRPGGME--RPTDAYKETHNITLSQEDT 277
             + F+G L  K +        E +  + + YT+++    E   P  AY    N+ +S E +
Sbjct:   228 S-FFGNLFAKSQPLTISDLIEKVAQTDVAYTLIKTSLTEDFSPEKAY----NVVVSAEGS 282

Query:   278 LFGG--------QVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPS 329
               G         +V  L++A L+A +  N +++  KVVEV  + +AP  P++EL + IP 
Sbjct:   283 NSGSGSSSSEAYKVPKLKIASLVADIFANTAVAENKVVEVSTDPSAPSRPVDELFSVIPE 342

Query:   330 --QRAEPKESIAPEKSDPAASKSMISEESSAPITEEPVQTKAKVTD 373
               +R    ++IA E+++  A  +      +A   +E  +   K+++
Sbjct:   343 DGRRKVYADAIARERAEEEAKVAADKAREAAEAAKEFEKQMQKLSE 388

GO:0000166 "nucleotide binding" evidence=IEA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0009295 "nucleoid" evidence=IDA

GO:0009508 "plastid chromosome" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0007623 "circadian rhythm" evidence=IEP

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0006364 "rRNA processing" evidence=RCA

GO:0009637 "response to blue light" evidence=RCA

GO:0009902 "chloroplast relocation" evidence=RCA

GO:0010027 "thylakoid membrane organization" evidence=RCA

GO:0010103 "stomatal complex morphogenesis" evidence=RCA

GO:0010114 "response to red light" evidence=RCA

GO:0010218 "response to far red light" evidence=RCA

GO:0015979 "photosynthesis" evidence=RCA

GO:0015995 "chlorophyll biosynthetic process" evidence=RCA

GO:0016117 "carotenoid biosynthetic process" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

GO:0034660 "ncRNA metabolic process" evidence=RCA

TAIR|locus:2185228 AT5G02240 [Arabidopsis thaliana (taxid:3702)]

 Score = 177 (67.4 bits), Expect = 7.1e-12, P = 7.1e-12
 Identities = 72/258 (27%), Positives = 115/258 (44%)

Query:    85 VAGATGKVGSRTVRELLKLG---FRVRAGVRSVQRAENLVQSVKQMK---LDGELANKGI 138
             V GA+G+ G + V + LK G   F  +  VRS Q  E +            D +  N   
Sbjct:     9 VTGASGRTG-QIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAF 67

Query:   139 QPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVF-DITGPYRIDFQATKNLVD 197
             Q ++ L ++   + K   ++P            G   + +F D   P ++D+   KN +D
Sbjct:    68 QGIDALVILTSAVPK---MKPGFDPTK------GGRPEFIFEDGQYPEQVDWIGQKNQID 118

Query:   198 AATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGM 257
             AA +A V H ++V S+G      P   L     +L+WKRKAE+ L  SG PYTI+R GG+
Sbjct:   119 AAKVAGVKHIVVVGSMGGTNPDHPLNKLGN-GNILVWKRKAEQYLADSGTPYTIIRAGGL 177

Query:   258 ERPTDAYKET---HNITLSQEDT--LFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAE 312
                    +E     +  L Q DT  +    V+ + +  LL   AKN++       E    
Sbjct:   178 LDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPE---G 234

Query:   313 TTAPLTPMEELLAKIPSQ 330
             T+ P    + L +++ S+
Sbjct:   235 TSTPTKDFKALFSQVTSR 252

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity" evidence=IEA

GO:0006694 "steroid biosynthetic process" evidence=IEA

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0048046 "apoplast" evidence=IDA

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

TAIR|locus:2040716 AT2G37660 [Arabidopsis thaliana (taxid:3702)]

 Score = 181 (68.8 bits), Expect = 1.5e-11, P = 1.5e-11
 Identities = 75/304 (24%), Positives = 137/304 (45%)

Query:    38 SSKKFSHPRKLKLPDFKAQASGTINICSEA--------VGATPTKADSKDDNLAFVAGAT 89
             +S   S PR   L  F++  S + +IC  +        V  T + A + +     V GA 
Sbjct:    27 ASSFVSVPRSSSL-QFRSLVSDSTSICGPSKFTGKNRRVSVTVSAAATTEPLTVLVTGAG 85

Query:    90 GKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKG-IQP-VEMLE 145
             G+ G    ++L +    F  R  VR+ +  E  +    ++ + G++ +   I P VE ++
Sbjct:    86 GRTGQIVYKKLKERSEQFVARGLVRTKESKEK-INGEDEVFI-GDIRDTASIAPAVEGID 143

Query:   146 LVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITG-PYRIDFQATKNLVDAATIAKV 204
              +        Q++P    +       G   +  FD    P ++D+   KN +DAA  A V
Sbjct:   144 ALVILTSAVPQMKPGFDPSK------GGRPEFFFDDGAYPEQVDWIGQKNQIDAAKAAGV 197

Query:   205 NHFIMVSSLGTNKFGFPA-AILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDA 263
                ++V S+G      P  +I N    +L+WKRKAE+ L  SG+PYTI+R GG++     
Sbjct:   198 KQIVLVGSMGGTNINHPLNSIGNA--NILVWKRKAEQYLADSGIPYTIIRAGGLQDKDGG 255

Query:   264 YKETHNITLSQEDTLFGGQVSNLQVAELL-ACM-AKNRSLSYCKVVEVIAETTAPLTPME 321
              +E   + + ++D L   +   +  A++   C+ A     +  K +++ ++     TP +
Sbjct:   256 IRE---LLVGKDDELLETETRTIARADVAEVCVQALQLEEAKFKALDLASKPEGTGTPTK 312

Query:   322 ELLA 325
             +  A
Sbjct:   313 DFKA 316

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity" evidence=IEA

GO:0006694 "steroid biosynthetic process" evidence=IEA

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009507 "chloroplast" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0042742 "defense response to bacterium" evidence=IEP;RCA

GO:0048046 "apoplast" evidence=IDA

GO:0005507 "copper ion binding" evidence=IDA

GO:0000272 "polysaccharide catabolic process" evidence=RCA

GO:0005982 "starch metabolic process" evidence=RCA

GO:0006364 "rRNA processing" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009664 "plant-type cell wall organization" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009814 "defense response, incompatible interaction" evidence=RCA

GO:0015995 "chlorophyll biosynthetic process" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

TAIR|locus:2180019 PCB2 "PALE-GREEN AND CHLOROPHYLL B REDUCED 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 152 (58.6 bits), Expect = 6.3e-08, P = 6.3e-08
 Identities = 95/355 (26%), Positives = 153/355 (43%)

Query:     1 MEICSLQSQTLSTIPSP--LSRNGLIVKSFGSCQILKFPSSKKF-----SHPRKLKLPDF 53
             M +CS  +   S  P P  + ++   +  F   Q+   P +  F     S   K K    
Sbjct:     1 MSLCSSFNVFASYSPKPKTIFKDSKFISQF---QVKSSPLASTFHTNESSTSLKYKRARL 57

Query:    54 KAQASGTINICSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS 113
             K  +S    I   A   +      KD N+  V G+TG +G   V+E++K GF V A  R 
Sbjct:    58 KPISSLDSGISEIATSPSFRNKSPKDINV-LVVGSTGYIGRFVVKEMIKRGFNVIAVARE 116

Query:   114 VQ--RAEN-LVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALG-NASVVIC 169
                 R +N   +++KQ  L G  AN     V  L+++E  +E        LG    VV+ 
Sbjct:   117 KSGIRGKNDKEETLKQ--LQG--ANVCFSDVTELDVLEKSIEN-------LGFGVDVVVS 165

Query:   170 CIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNK--FGFPAAILNL 227
             C+ +    + D    ++ID++ATKN + A       HF+++S++   K    F  A L  
Sbjct:   166 CLASRNGGIKD---SWKIDYEATKNSLVAGKKFGAKHFVLLSAICVQKPLLEFQRAKLK- 221

Query:   228 FWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFG-GQVSNL 286
             F   L+   + ++    S   Y+IVRP    +      E   +   +   +FG G++   
Sbjct:   222 FEAELMDLAEQQD----SSFTYSIVRPTAFFKSLGGQVEI--VKDGKPYVMFGDGKLCAC 275

Query:   287 Q-VAEL-LACMAKNRSLSYCKVVEV--IAETTAPLTPME--ELLAKIPSQRAEPK 335
             + ++E  LA    +  L   K+ +V  I      LTP+E  E+L KI  +  EPK
Sbjct:   276 KPISEQDLAAFIADCVLEENKINQVLPIGGPGKALTPLEQGEILFKILGR--EPK 328

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0015995 "chlorophyll biosynthetic process" evidence=RCA;IMP;TAS

GO:0051744 "3,8-divinyl protochlorophyllide a 8-vinyl reductase activity" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0006364 "rRNA processing" evidence=RCA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=RCA

GO:0009073 "aromatic amino acid family biosynthetic process" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0016117 "carotenoid biosynthetic process" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0019344 "cysteine biosynthetic process" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

UNIPROTKB|Q71X34 LMOf2365_2365 "Putative uncharacterized protein" [Listeria monocytogenes serotype 4b str. F2365 (taxid:265669)]

 Score = 87 (35.7 bits), Expect = 0.00036, Sum P(2) = 0.00036
 Identities = 27/72 (37%), Positives = 37/72 (51%)

Query:   187 IDFQATKNLVDAATIAKVNHFIMVSSLGT-NKFGFPAAILNLFWGVLLWKRKAEEALIAS 245
             ID       ++ A    V  FI+VSS G  N    P ++++     L  K+ A+E L  S
Sbjct:    85 IDQNGAIKAIETAKEKGVRRFIIVSSYGADNPENGPESLIHY----LKAKQAADEELKRS 140

Query:   246 GLPYTIVRPGGM 257
             GL YTIVRP G+
Sbjct:   141 GLDYTIVRPVGL 152

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	380
PLN03209	576	PLN03209, PLN03209, translocon at the inner envelo	0.0
cd05243	203	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	8e-59
PLN00141	251	PLN00141, PLN00141, Tic62-NAD(P)-related group II	1e-36
pfam13460	182	pfam13460, NAD_binding_10, NADH(P)-binding	3e-26
cd05226	176	cd05226, SDR_e_a, Extended (e) and atypical (a) SD	2e-21
cd05269	272	cd05269, TMR_SDR_a, triphenylmethane reductase (TM	8e-19
cd05244	207	cd05244, BVR-B_like_SDR_a, biliverdin IX beta redu	5e-16
cd05251	242	cd05251, NmrA_like_SDR_a, NmrA (a transcriptional	7e-16
pfam05368	232	pfam05368, NmrA, NmrA-like family	1e-15
cd05271	273	cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub	2e-14
cd05250	214	cd05250, CC3_like_SDR_a, CC3(TIP30)-like, atypical	1e-13
PLN02657	390	PLN02657, PLN02657, 3,8-divinyl protochlorophyllid	1e-13
CHL00194	317	CHL00194, ycf39, Ycf39; Provisional	1e-12
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	2e-12
cd05228	318	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr	2e-12
COG0702	275	COG0702, COG0702, Predicted nucleoside-diphosphate	3e-12
cd05259	282	cd05259, PCBER_SDR_a, phenylcoumaran benzylic ethe	7e-10
cd08947	224	cd08947, NmrA_TMR_like_SDR_a, NmrA (a transcriptio	7e-09
TIGR03466	328	TIGR03466, HpnA, hopanoid-associated sugar epimera	4e-08
cd05231	259	cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcript	7e-08
cd05227	301	cd05227, AR_SDR_e, aldehyde reductase, extended (e	8e-08
cd05263	293	cd05263, MupV_like_SDR_e, Pseudomonas fluorescens	9e-08
cd05245	293	cd05245, SDR_a2, atypical (a) SDRs, subgroup 2	2e-07
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	6e-07
cd05265	250	cd05265, SDR_a1, atypical (a) SDRs, subgroup 1	1e-06
pfam01073	280	pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr	5e-06
cd08958	293	cd08958, FR_SDR_e, flavonoid reductase (FR), exten	1e-04
cd05193	295	cd05193, AR_like_SDR_e, aldehyde reductase, flavon	1e-04
cd05232	303	cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase,	4e-04
cd05262	291	cd05262, SDR_a7, atypical (a) SDRs, subgroup 7	5e-04
cd05241	331	cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d	7e-04
cd05267	203	cd05267, SDR_a6, atypical (a) SDRs, subgroup 6	9e-04

>gnl|CDD|178748 PLN03209, PLN03209, translocon at the inner envelope of chloroplast subunit 62; Provisional

 Score =  620 bits (1600), Expect = 0.0
 Identities = 286/379 (75%), Positives = 312/379 (82%), Gaps = 4/379 (1%)

Query: 1   MEICSLQSQTLSTIPSPLSRNGLIVKSFGSCQILKFPSSKKFSHPRKLKLPDFKAQASGT 60
           ME  SLQS  ++TIP+ L++ G I K F   Q+L+FP   K  H RKL+  D KAQASG 
Sbjct: 1   MEGTSLQSSAITTIPTSLTKCGFIEKPFLHGQLLRFPGFSKHPHSRKLRSLDIKAQASGA 60

Query: 61  INICSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL 120
               S A+ A P + D+KD++LAFVAGATGKVGSRTVRELLKLGFRVRAGVRS QRAE+L
Sbjct: 61  TKFSSAAIEAIPKELDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESL 120

Query: 121 VQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFD 180
           VQSVKQMKLD E    G QPVE LE+VECDLEK  QI PALGNASVVICCIGASEKEVFD
Sbjct: 121 VQSVKQMKLDVE----GTQPVEKLEIVECDLEKPDQIGPALGNASVVICCIGASEKEVFD 176

Query: 181 ITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEE 240
           +TGPYRID+ ATKNLVDAAT+AKVNHFI+V+SLGTNK GFPAAILNLFWGVL WKRKAEE
Sbjct: 177 VTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVGFPAAILNLFWGVLCWKRKAEE 236

Query: 241 ALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRS 300
           ALIASGLPYTIVRPGGMERPTDAYKETHN+TLS+EDTLFGGQVSNLQVAEL+ACMAKNR 
Sbjct: 237 ALIASGLPYTIVRPGGMERPTDAYKETHNLTLSEEDTLFGGQVSNLQVAELMACMAKNRR 296

Query: 301 LSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPKESIAPEKSDPAASKSMISEESSAPI 360
           LSYCKVVEVIAETTAPLTPMEELLAKIPSQR  PKES A +   P  +K +  E  S PI
Sbjct: 297 LSYCKVVEVIAETTAPLTPMEELLAKIPSQRVPPKESDAADGPKPVPTKPVTPEAPSPPI 356

Query: 361 TEEPVQTKAKVTDPLSPYT 379
            EEP Q KA V  PLSPYT
Sbjct: 357 EEEPPQPKAVVPRPLSPYT 375

Length = 576

>gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5

 Score =  189 bits (482), Expect = 8e-59
 Identities = 79/215 (36%), Positives = 99/215 (46%), Gaps = 28/215 (13%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
            V GATGKVG   VRELL  G++VRA VR   +AE L  +                    
Sbjct: 3   LVVGATGKVGRHVVRELLDRGYQVRALVRDPSQAEKLEAAG------------------- 43

Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
            E+V  DL     +  AL     VI   G+  K          +D+    NL+DAA  A 
Sbjct: 44  AEVVVGDLTDAESLAAALEGIDAVISAAGSGGK---GGPRTEAVDYDGNINLIDAAKKAG 100

Query: 204 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDA 263
           V  F++VSS+G +K   P   L      L  KRKAE+ L ASGL YTIVRPGG+   TD 
Sbjct: 101 VKRFVLVSSIGADKPSHP---LEALGPYLDAKRKAEDYLRASGLDYTIVRPGGL---TDD 154

Query: 264 YKETHNITLSQEDTLFGGQVSNLQVAELLACMAKN 298
              T  + L  + T   G +S   VAE+LA     
Sbjct: 155 PAGTGRVVLGGDGTRLDGPISRADVAEVLAEALDT 189

This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|215072 PLN00141, PLN00141, Tic62-NAD(P)-related group II protein; Provisional

 Score =  133 bits (335), Expect = 1e-36
 Identities = 102/270 (37%), Positives = 141/270 (52%), Gaps = 34/270 (12%)

Query: 70  ATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKL 129
           A+   A++      FVAGATG+ G R V +LL  GF V+AGVR V +A+    S+ Q   
Sbjct: 7   ASEEDAENVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKT---SLPQ--- 60

Query: 130 DGELANKGIQPVEMLELVECDL-EKRVQIEPALGNAS-VVICCIGASEKEVFDITGPYRI 187
                     P   L++V  D+ E   ++  A+G+ S  VIC  G   +  FD   P+++
Sbjct: 61  ---------DP--SLQIVRADVTEGSDKLVEAIGDDSDAVICATGF--RRSFDPFAPWKV 107

Query: 188 DFQATKNLVDAATIAKVNHFIMVSSLGTN-----KFGFPAAI-LNLFWGVLLWKRKAEEA 241
           D   T NLV+A   A V  FI+VSS+  N     +   PA I LNLF   L+ K +AE+ 
Sbjct: 108 DNFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQILNPAYIFLNLFGLTLVAKLQAEKY 167

Query: 242 LIASGLPYTIVRPGGM-ERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRS 300
           +  SG+ YTIVRPGG+   P      T NI +  EDTL+ G +S  QVAE +A  A    
Sbjct: 168 IRKSGINYTIVRPGGLTNDPP-----TGNIVMEPEDTLYEGSISRDQVAE-VAVEALLCP 221

Query: 301 LSYCKVVEVIAETTAPLTPMEELLAKIPSQ 330
            S  KVVE++A   AP    ++L A I  +
Sbjct: 222 ESSYKVVEIVARADAPKRSYKDLFASIKQK 251

Length = 251

>gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding

 Score =  103 bits (258), Expect = 3e-26
 Identities = 55/176 (31%), Positives = 70/176 (39%), Gaps = 36/176 (20%)

Query: 85  VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML 144
           V GATGK G R V+ELL  G +V A  R+  +A                      P   +
Sbjct: 3   VIGATGKTGRRLVKELLARGHQVTALSRNPSKA----------------------PAPGV 40

Query: 145 ELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKV 204
             V+ DL     +  AL     V+   GA              D    K+L+DAA  A V
Sbjct: 41  TPVQKDLFDLADLAEALAGVDAVVDAFGARPD-----------DSDGVKHLLDAAARAGV 89

Query: 205 NHFIMVSSLGT---NKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGM 257
              ++VS+ G        F      LF      K  AEE L ASGL +TIVRPG +
Sbjct: 90  RRIVVVSAAGLYRDEPGTFRLDDAPLFPPYARAKAAAEELLRASGLDWTIVRPGAL 145

Length = 182

>gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs

 Score = 89.8 bits (223), Expect = 2e-21
 Identities = 55/176 (31%), Positives = 73/176 (41%), Gaps = 27/176 (15%)

Query: 83  AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVE 142
             + GATG +G    RELL+ G  V   VR+ +R     Q                   E
Sbjct: 1   ILILGATGFIGRALARELLEQGHEVTLLVRNTKRLSKEDQ-------------------E 41

Query: 143 MLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA 202
            + +VE DL     +  A+    VVI   GA      D      +D + T+N+++AA  A
Sbjct: 42  PVAVVEGDLRDLDSLSDAVQGVDVVIHLAGAPR----DTRDFCEVDVEGTRNVLEAAKEA 97

Query: 203 KVNHFIMVSSLGTNKFGFPAA--ILNLFWGVLLWKRKAEEALIASGLPYTIVRPGG 256
            V HFI +SSLG             +     L  K K E  L  + LPYTIVRPG 
Sbjct: 98  GVKHFIFISSLGAYGDLHEETEPSPSSP--YLAVKAKTEAVLREASLPYTIVRPGV 151

Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176

>gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs

 Score = 85.0 bits (211), Expect = 8e-19
 Identities = 47/172 (27%), Positives = 68/172 (39%), Gaps = 39/172 (22%)

Query: 85  VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML 144
           V GATGK+G+  V  LL     V A VR+ ++A                A  G+      
Sbjct: 3   VTGATGKLGTAVVELLLAKVASVVALVRNPEKA-------------KAFAADGV------ 43

Query: 145 ELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRID-FQATKNLVDAATIAK 203
           E+ + D +    +E A                 +  I+     D  Q  KN +DAA  A 
Sbjct: 44  EVRQGDYDDPETLERAFEGVDR-----------LLLISPSDLEDRIQQHKNFIDAAKQAG 92

Query: 204 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPG 255
           V H + +S+ G +      +   L           E+ L ASG+PYTI+RPG
Sbjct: 93  VKHIVYLSASGAD----EDSPF-LLAR---DHGATEKYLEASGIPYTILRPG 136

TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272

>gnl|CDD|187555 cd05244, BVR-B_like_SDR_a, biliverdin IX beta reductase (BVR-B, aka flavin reductase)-like proteins; atypical (a) SDRs

 Score = 75.7 bits (187), Expect = 5e-16
 Identities = 51/211 (24%), Positives = 74/211 (35%), Gaps = 47/211 (22%)

Query: 85  VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML 144
           + GATG+ GS  VRE L  G  V A VR   +                   K       L
Sbjct: 4   IIGATGRTGSAIVREALARGHEVTALVRDPAKLP-------------AEHEK-------L 43

Query: 145 ELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKV 204
           ++V+ D+     ++ AL     VI  +G           P  +  + T+N+V A   A V
Sbjct: 44  KVVQGDVLDLEDVKEALEGQDAVISALGTRNDL-----SPTTLHSEGTRNIVSAMKAAGV 98

Query: 205 NHFIMVSSLGTNKFGFPAAILNLFWGVLL----WKR------KAEEALIASGLPYTIVRP 254
              I+V   G+         + L    LL     +R      +  + L  SGL +T VRP
Sbjct: 99  KRLIVVGGAGS---LDDRPKVTLVLDTLLFPPALRRVAEDHARMLKVLRESGLDWTAVRP 155

Query: 255 ---------GGMERPTDAYKETHNITLSQED 276
                    GG  R            +S+ D
Sbjct: 156 PALFDGGATGGYYRVELLVDAKGGSRISRAD 186

Human BVR-B catalyzes pyridine nucleotide-dependent production of bilirubin-IX beta during fetal development; in the adult BVR-B has flavin and ferric reductase activities. Human BVR-B catalyzes the reduction of FMN, FAD, and riboflavin. Recognition of flavin occurs mostly by hydrophobic interactions, accounting for the broad substrate specificity. Atypical SDRs are distinct from classical SDRs. BVR-B does not share the key catalytic triad, or conserved tyrosine typical of SDRs. The glycine-rich NADP-binding motif of BVR-B is GXXGXXG, which is similar but not identical to the pattern seen in extended SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 207

>gnl|CDD|187561 cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs

 Score = 76.2 bits (188), Expect = 7e-16
 Identities = 57/178 (32%), Positives = 69/178 (38%), Gaps = 44/178 (24%)

Query: 85  VAGATGKVGSRTVRELLK-LGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
           V GATGK G   VR LLK  GF+VRA  R                    LA  G+     
Sbjct: 3   VFGATGKQGGSVVRALLKDPGFKVRALTRDPSS-----------PAAKALAAPGV----- 46

Query: 144 LELVECDLEKRVQIEPALGNASVVICCI----GASEKEVFDITGPYRIDFQATKNLVDAA 199
            E+V+ DL+    +E AL     V           E E+           Q  KN+VDAA
Sbjct: 47  -EVVQGDLDDPESLEAALKGVYGVFLVTDFWEAGGEDEIA----------QG-KNVVDAA 94

Query: 200 TIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKA--EEALIASGLPYTIVRPG 255
             A V HF+  S     K                +  KA  EE + ASGLP TI+RP 
Sbjct: 95  KRAGVQHFVFSSVPDVEKLTLAVPH---------FDSKAEVEEYIRASGLPATILRPA 143

NmrA and HSCARG like proteins. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 242

>gnl|CDD|191263 pfam05368, NmrA, NmrA-like family

 Score = 75.0 bits (185), Expect = 1e-15
 Identities = 56/174 (32%), Positives = 68/174 (39%), Gaps = 36/174 (20%)

Query: 85  VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML 144
           V GATG  G   VR  LK G  VRA VR  +    L +S+K               V   
Sbjct: 3   VFGATGYQGGSVVRASLKAGHPVRALVRDPKSE--LAKSLKA------------AGV--- 45

Query: 145 ELVECDLEKRVQIEPALGNASVVICCIG-ASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
           ELVE DL+    +  AL    VV    G    KE+ D            K L DAA  A 
Sbjct: 46  ELVEGDLDDHESLVEALKGVDVVFSVTGFWLSKEIED-----------GKKLADAAKEAG 94

Query: 204 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLW--KRKAEEALIASGLPYTIVRPG 255
           V HFI  S  G +          +   V  +  K + E  + A G+PYT V  G
Sbjct: 95  VKHFIP-SEFGND----VDRSNGVEPAVPHFDSKAEVERYIRALGIPYTFVYAG 143

NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families. Length = 232

>gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs

 Score = 72.3 bits (178), Expect = 2e-14
 Identities = 48/172 (27%), Positives = 69/172 (40%), Gaps = 27/172 (15%)

Query: 85  VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML 144
           V GATG +G   V  L K G +V    R    A       +++ + G+L    +      
Sbjct: 5   VFGATGFIGRYVVNRLAKRGSQVIVPYRCEAYA-------RRLLVMGDLG--QVLF---- 51

Query: 145 ELVECDLEKRVQIEPALGNASVVICCIGAS-EKEVFDITGPYRIDFQATKNLVDAATIAK 203
             VE DL     I  AL  + VVI  +G   E + F       +  +  + L  AA  A 
Sbjct: 52  --VEFDLRDDESIRKALEGSDVVINLVGRLYETKNFSF---EDVHVEGPERLAKAAKEAG 106

Query: 204 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPG 255
           V   I +S+LG +    P+  L         K + EEA+  +    TIVRP 
Sbjct: 107 VERLIHISALGADANS-PSKYLRS-------KAEGEEAVREAFPEATIVRPS 150

This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273

>gnl|CDD|187560 cd05250, CC3_like_SDR_a, CC3(TIP30)-like, atypical (a) SDRs

 Score = 68.9 bits (169), Expect = 1e-13
 Identities = 50/174 (28%), Positives = 69/174 (39%), Gaps = 27/174 (15%)

Query: 83  AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVE 142
           A V GATG VG   +RELLK  +  +  V ++ R +      K          K +Q V 
Sbjct: 3   ALVLGATGLVGKHLLRELLKSPYYSK--VTAIVRRKLTFPEAK---------EKLVQIVV 51

Query: 143 MLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA 202
                  D E+  +   A  N  V  CC+G + K+        ++D      L   A  A
Sbjct: 52  -------DFERLDEYLEAFQNPDVGFCCLGTTRKKAGSQENFRKVDHDYVLKLAKLAKAA 104

Query: 203 KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPY-TIVRPG 255
            V HF++VSSLG +            +  L  K + E  L   G    TI RPG
Sbjct: 105 GVQHFLLVSSLGADP--------KSSFLYLKVKGEVERDLQKLGFERLTIFRPG 150

Atypical SDRs in this subgroup include CC3 (also known as TIP30) which is implicated in tumor suppression. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine rich NAD(P)-binding motif that resembles the extended SDRs, and have an active site triad of the SDRs (YXXXK and upstream Ser), although the upstream Asn of the usual SDR active site is substituted with Asp. For CC3, the Tyr of the triad is displaced compared to the usual SDRs and the protein is monomeric, both these observations suggest that the usual SDR catalytic activity is not present. NADP appears to serve an important role as a ligand, and may be important in the interaction with other macromolecules. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 214

>gnl|CDD|178263 PLN02657, PLN02657, 3,8-divinyl protochlorophyllide a 8-vinyl reductase

 Score = 70.9 bits (174), Expect = 1e-13
 Identities = 58/230 (25%), Positives = 88/230 (38%), Gaps = 41/230 (17%)

Query: 36  FPSSKKFSHPRKLKLPDFKAQASGTINICSEAVGATPTKADSKDDN---LAFVAGATGKV 92
            PS++  +            +A+      S A  A   ++    +       V GATG +
Sbjct: 18  SPSNRLAASLG----GALVRRAAAASR-GSRATAAAAAQSFRSKEPKDVTVLVVGATGYI 72

Query: 93  GSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLE 152
           G   VREL++ G+ V A  R               K   E   K +      E+V  D+ 
Sbjct: 73  GKFVVRELVRRGYNVVAVAREKSGIRG--------KNGKEDTKKELP---GAEVVFGDVT 121

Query: 153 KRVQIEPALGNAS----VVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFI 208
               +   L +      VV+ C+ +    V D    ++ID+QATKN +DA       HF+
Sbjct: 122 DADSLRKVLFSEGDPVDVVVSCLASRTGGVKD---SWKIDYQATKNSLDAGREVGAKHFV 178

Query: 209 MVSSLGTNK--FGFPAAILNLFWGVLLWKRKAEEALIA--SGLPYTIVRP 254
           ++S++   K    F  A           K K E  L A  S   Y+IVRP
Sbjct: 179 LLSAICVQKPLLEFQRA-----------KLKFEAELQALDSDFTYSIVRP 217

Length = 390

>gnl|CDD|177093 CHL00194, ycf39, Ycf39; Provisional

 Score = 67.7 bits (166), Expect = 1e-12
 Identities = 52/174 (29%), Positives = 78/174 (44%), Gaps = 34/174 (19%)

Query: 85  VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML 144
           V GATG +G + VR+ L  G++VR  VR++++A  L       K  G             
Sbjct: 5   VIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFL-------KEWGA------------ 45

Query: 145 ELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKV 204
           ELV  DL     + P+    + +I    AS     D+    +ID+     L++AA  AK+
Sbjct: 46  ELVYGDLSLPETLPPSFKGVTAII---DASTSRPSDLYNAKQIDWDGKLALIEAAKAAKI 102

Query: 205 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKA--EEALIASGLPYTIVRPGG 256
             FI  S L   ++ +          + L K K+  E+ L  SG+PYTI R  G
Sbjct: 103 KRFIFFSILNAEQYPY----------IPLMKLKSDIEQKLKKSGIPYTIFRLAG 146

Length = 317

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 66.9 bits (163), Expect = 2e-12
 Identities = 45/188 (23%), Positives = 61/188 (32%), Gaps = 35/188 (18%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
            V G  G +GS  V  LL  G  VR   R     + L+  V                   
Sbjct: 4   LVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLLSGV------------------- 44

Query: 144 LELVECDLEKRVQIEPAL-GNASVVI---CCIGASEKEVFDITGPYRIDFQATKNLVDAA 199
            E V  DL  R  ++    G    VI         +    D      ++   T NL++AA
Sbjct: 45  -EFVVLDLTDRDLVDELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAA 103

Query: 200 TIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLW-------KRKAEEAL----IASGLP 248
             A V  F+  SS+       P   ++   G           K  AE+ L       GLP
Sbjct: 104 RAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYARLYGLP 163

Query: 249 YTIVRPGG 256
             I+RP  
Sbjct: 164 VVILRPFN 171

Length = 314

>gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs

 Score = 66.9 bits (164), Expect = 2e-12
 Identities = 52/199 (26%), Positives = 70/199 (35%), Gaps = 44/199 (22%)

Query: 83  AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVE 142
             V GATG +GS  VR LL  G+RVRA VRS   A  L                      
Sbjct: 1   ILVTGATGFLGSNLVRALLAQGYRVRALVRSGSDAVLL-------------------DGL 41

Query: 143 MLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGP-----YRIDFQATKNLVD 197
            +E+VE DL     +  A+     V             +        YR + + T+N++D
Sbjct: 42  PVEVVEGDLTDAASLAAAMKGCDRVFHLAA-----FTSLWAKDRKELYRTNVEGTRNVLD 96

Query: 198 AATIAKVNHFIMVSSLGTNKFGFPA-AILNLFWGVLLW---------KRKAEEAL---IA 244
           AA  A V   +  SS+     G P    ++                 K  AE  +    A
Sbjct: 97  AALEAGVRRVVHTSSIAA--LGGPPDGRIDETTPWNERPFPNDYYRSKLLAELEVLEAAA 154

Query: 245 SGLPYTIVRPGGMERPTDA 263
            GL   IV P  +  P D 
Sbjct: 155 EGLDVVIVNPSAVFGPGDE 173

This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318

>gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 66.1 bits (161), Expect = 3e-12
 Identities = 47/173 (27%), Positives = 63/173 (36%), Gaps = 33/173 (19%)

Query: 85  VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML 144
           V GATG VG   VRELL  G  VRA VR+ + A  L                G++ V   
Sbjct: 5   VTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAAL--------------AGGVEVVLG- 49

Query: 145 ELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKV 204
                DL     +         V+   G  +           +   A     +AA  A V
Sbjct: 50  -----DLRDPKSLVAGAKGVDGVLLISGLLDGSDAFRA----VQVTAVVRAAEAAG-AGV 99

Query: 205 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGM 257
            H + +S LG +     A+   L       K   E AL +SG+PYT +R    
Sbjct: 100 KHGVSLSVLGAD----AASPSALAR----AKAAVEAALRSSGIPYTTLRRAAF 144

Length = 275

>gnl|CDD|187569 cd05259, PCBER_SDR_a, phenylcoumaran benzylic ether reductase (PCBER) like, atypical (a) SDRs

 Score = 59.2 bits (144), Expect = 7e-10
 Identities = 45/176 (25%), Positives = 62/176 (35%), Gaps = 42/176 (23%)

Query: 85  VAGATGKVGSRTVRELLKL-GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
           +AGATG +G   V  LL   GF V    R    + N            E    G++    
Sbjct: 4   IAGATGTLGGPIVSALLASPGFTVTVLTRPSSTSSN------------EFQPSGVK---- 47

Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
             +V  D      +  AL     VI  +G +            I  Q    L+DAA  A 
Sbjct: 48  --VVPVDYASHESLVAALKGVDAVISALGGAA-----------IGDQ--LKLIDAAIAAG 92

Query: 204 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAE--EALIAS--GLPYTIVRPG 255
           V  FI       ++FG     +     + L+  K +    L A   GLP+T V  G
Sbjct: 93  VKRFI------PSEFGVDYDRIGALPLLDLFDEKRDVRRYLRAKNAGLPWTYVSTG 142

PCBER and pinoresinol-lariciresinol reductases are NADPH-dependent aromatic alcohol reductases, and are atypical members of the SDR family. Other proteins in this subgroup are identified as eugenol synthase. These proteins contain an N-terminus characteristic of NAD(P)-binding proteins and a small C-terminal domain presumed to be involved in substrate binding, but they do not have the conserved active site Tyr residue typically found in SDRs. Numerous other members have unknown functions. The glycine rich NADP-binding motif in this subgroup is of 2 forms: GXGXXG and G[GA]XGXXG; it tends to be atypical compared with the forms generally seen in classical or extended SDRs. The usual SDR active site tetrad is not present, but a critical active site Lys at the usual SDR position has been identified in various members, though other charged and polar residues are found at this position in this subgroup. Atypical SDR-related proteins retain the Rossmann fold of the SDRs, but have limited sequence identity and generally lack the catalytic properties of the archetypical members. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 282

>gnl|CDD|187651 cd08947, NmrA_TMR_like_SDR_a, NmrA (a transcriptional regulator), HSCARG (an NADPH sensor), and triphenylmethane reductase (TMR) like proteins, atypical (a) SDRs

 Score = 55.2 bits (133), Expect = 7e-09
 Identities = 51/175 (29%), Positives = 74/175 (42%), Gaps = 43/175 (24%)

Query: 85  VAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
           V GATG+ G   +R LL  G  +VRA VR+V++A               LA++G+     
Sbjct: 3   VTGATGQQGGSVIRHLLAKGASQVRAVVRNVEKA-------------ATLADQGV----- 44

Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQAT---KNLVDAAT 200
            E+ + D  +   ++ A   AS            +F ITGP+  +       KN+ DAA 
Sbjct: 45  -EVRQGDYNQPELLQKAFAGASK-----------LFIITGPHYDNTLEIKQGKNVADAAR 92

Query: 201 IAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPG 255
            A V H   + S G       A    L    L      E A+  +G+PYT +R G
Sbjct: 93  RAGVKH---IYSTGYAFAEESAI--PLAHVKLA----VEYAIRTTGIPYTFLRNG 138

Atypical SDRs belonging to this subgroup include NmrA, HSCARG, and TMR, these proteins bind NAD(P) but they lack the usual catalytic residues of the SDRs. Atypical SDRs are distinct from classical SDRs. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. TMR, an NADP-binding protein, lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 224

>gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase

 Score = 54.2 bits (131), Expect = 4e-08
 Identities = 54/185 (29%), Positives = 68/185 (36%), Gaps = 32/185 (17%)

Query: 83  AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVE 142
             V GATG VGS  VR LL+ G  VR  VR      NL        LD            
Sbjct: 3   VLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLE------GLDV----------- 45

Query: 143 MLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA 202
             E+VE DL     +  A+     +            D    Y  + + T+NL+ AA  A
Sbjct: 46  --EIVEGDLRDPASLRKAVAGCRALFHVAADYRLWAPDPEEMYAANVEGTRNLLRAALEA 103

Query: 203 KVNHFIMVSS---LGTNKFGFPA-----AILNLFWGV-----LLWKRKAEEALIASGLPY 249
            V   +  SS   LG    G PA     + L+   G       L ++ A E     GLP 
Sbjct: 104 GVERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQAALEMAAEKGLPV 163

Query: 250 TIVRP 254
            IV P
Sbjct: 164 VIVNP 168

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328

>gnl|CDD|187542 cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcriptional regulator) and triphenylmethane reductase (TMR) like proteins, subgroup 1, atypical (a) SDRs

 Score = 52.7 bits (127), Expect = 7e-08
 Identities = 47/171 (27%), Positives = 68/171 (39%), Gaps = 32/171 (18%)

Query: 85  VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML 144
           V GATG++GS+    LL+ G  VRA VRS +RA               LA +G       
Sbjct: 3   VTGATGRIGSKVATTLLEAGRPVRALVRSDERAA-------------ALAARGA------ 43

Query: 145 ELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKV 204
           E+V  DL+    +  AL     V      +     D    Y    QA +    A   A V
Sbjct: 44  EVVVGDLDDPAVLAAALAGVDAVFFLAPPAPTA--DARPGYV---QAAEAFASALREAGV 98

Query: 205 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPG 255
              + +SS+G +    P+ ++   W         E+ L  +GLP   +RP 
Sbjct: 99  KRVVNLSSVGAD-PESPSGLIRGHW-------LMEQVLNWAGLPVVHLRPA 141

Atypical SDRs related to NMRa, TMR, and HSCARG (an NADPH sensor). This subgroup resembles the SDRs and has a partially conserved characteristic [ST]GXXGXXG NAD-binding motif, but lacks the conserved active site residues. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 259

>gnl|CDD|187538 cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs

 Score = 53.0 bits (128), Expect = 8e-08
 Identities = 42/141 (29%), Positives = 59/141 (41%), Gaps = 24/141 (17%)

Query: 82  LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPV 141
           L  V GATG + S  V +LLK G++VR  VRS+ ++  L   +K    +           
Sbjct: 1   LVLVTGATGFIASHIVEQLLKAGYKVRGTVRSLSKSAKLKALLKAAGYNDR--------- 51

Query: 142 EMLELVECDL-EKRVQIEPALGNASVVICCIGASEKEVFDITGPYR----IDF--QATKN 194
             LE V  D        + AL     VI    AS    F  TGP      ID   + T N
Sbjct: 52  --LEFVIVDDLTAPNAWDEALKGVDYVIHV--AS---PFPFTGPDAEDDVIDPAVEGTLN 104

Query: 195 LVDAA-TIAKVNHFIMVSSLG 214
           +++AA     V   ++ SS+ 
Sbjct: 105 VLEAAKAAGSVKRVVLTSSVA 125

This subgroup contains aldehyde reductase of the extended SDR-type and related proteins. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 301

>gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs

 Score = 52.8 bits (127), Expect = 9e-08
 Identities = 46/196 (23%), Positives = 78/196 (39%), Gaps = 45/196 (22%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
           FV G TG +G   V+ LL+ GF+V   VRS    E+L ++ ++++  G  A       + 
Sbjct: 2   FVTGGTGFLGRHLVKRLLENGFKVLVLVRS----ESLGEAHERIEEAGLEA-------DR 50

Query: 144 LELVECDLEKRV------QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVD 197
           + ++E DL +              G    VI C  AS          +R +   T+++++
Sbjct: 51  VRVLEGDLTQPNLGLSAAASRELAGKVDHVIHC-AASYDFQAPNEDAWRTNIDGTEHVLE 109

Query: 198 AATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLW--------------KRKAE-EAL 242
            A    +  F  VS+         A +     G +                + KAE E L
Sbjct: 110 LAARLDIQRFHYVST---------AYVAGNREGNIRETELNPGQNFKNPYEQSKAEAEQL 160

Query: 243 I---ASGLPYTIVRPG 255
           +   A+ +P T+ RP 
Sbjct: 161 VRAAATQIPLTVYRPS 176

This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187556 cd05245, SDR_a2, atypical (a) SDRs, subgroup 2

 Score = 52.0 bits (125), Expect = 2e-07
 Identities = 44/173 (25%), Positives = 63/173 (36%), Gaps = 34/173 (19%)

Query: 85  VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML 144
           V GATG VG R V  LL+ G +VRA VRS ++  +   S                  E +
Sbjct: 3   VTGATGYVGGRLVPRLLQEGHQVRALVRSPEKLADRPWS------------------ERV 44

Query: 145 ELVECDLEKRVQIEPALGNASVVICCIGA--SEKEVFDITGPYRIDFQATKNLVDAATIA 202
            +V  DLE    +  AL         + +  S  +  +       D +A +N   AA  A
Sbjct: 45  TVVRGDLEDPESLRAALEGIDTAYYLVHSMGSGGDFEE------ADRRAARNFARAARAA 98

Query: 203 KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPG 255
            V   I +  L                  L  + +  E L A G+P T +R  
Sbjct: 99  GVKRIIYLGGLIPKGEELSPH--------LRSRAEVGEILRAGGVPVTELRAA 143

This subgroup contains atypical SDRs, one member is identified as Escherichia coli protein ybjT, function unknown. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that generally matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score = 49.6 bits (119), Expect = 6e-07
 Identities = 32/137 (23%), Positives = 45/137 (32%), Gaps = 30/137 (21%)

Query: 83  AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVE 142
             V G TG +GS  VR LL+ G+ V    R  +                           
Sbjct: 1   ILVTGGTGFIGSHLVRRLLQEGYEVIVLGRRRRSESLNTGR------------------- 41

Query: 143 MLELVECDLEKRVQIEPALGNAS---VVICCIGASEKEVF-DITGP---YRIDFQATKNL 195
            +   E DL     +E  L       V+     A++  V      P    R +   T  L
Sbjct: 42  -IRFHEGDLTDPDALERLLAEVQPDAVIHL---AAQSGVGASFEDPADFIRANVLGTLRL 97

Query: 196 VDAATIAKVNHFIMVSS 212
           ++AA  A V  F+  SS
Sbjct: 98  LEAARRAGVKRFVFASS 114

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1

 Score = 48.8 bits (117), Expect = 1e-06
 Identities = 47/203 (23%), Positives = 68/203 (33%), Gaps = 58/203 (28%)

Query: 85  VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML 144
           + G T  +G   V ELL  G  V                         + N+G    ++ 
Sbjct: 5   IIGGTRFIGKALVEELLAAGHDV------------------------TVFNRGRTKPDLP 40

Query: 145 ELVE---CDLEKRVQIEPALGNAS--VVICCIGASEKEVFDITGPYRIDFQATKNLVDAA 199
           E VE    D   R  +E  LG     VV+  I  + ++V            A K      
Sbjct: 41  EGVEHIVGDRNDRDALEELLGGEDFDVVVDTIAYTPRQV-------ERALDAFKG----- 88

Query: 200 TIAKVNHFIMVSSLG-----------TNKFGFPAAILNLFWGVL-LWKRKAEEALI-ASG 246
              +V  +I +SS             +     P A+           KR AE+ LI A+ 
Sbjct: 89  ---RVKQYIFISSASVYLKPGRVITESTPLREPDAVGLSDPWDYGRGKRAAEDVLIEAAA 145

Query: 247 LPYTIVRPGGMERPTD-AYKETH 268
            PYTIVRP  +  P D   +  +
Sbjct: 146 FPYTIVRPPYIYGPGDYTGRLAY 168

Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250

>gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family

 Score = 47.3 bits (113), Expect = 5e-06
 Identities = 35/148 (23%), Positives = 61/148 (41%), Gaps = 24/148 (16%)

Query: 85  VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML 144
           V G  G +G   VR LL+ G  ++  VR      +        +L  + +   +      
Sbjct: 2   VTGGGGFLGRHIVRLLLREG-ELQE-VRVFDLRFS-------PELLEDFSKLQVITY--- 49

Query: 145 ELVECDLEKRVQIEPALGNASVVI--CCIGASEKEV-FDITGPYRIDFQATKNLVDAATI 201
             +E D+  +  +  AL  + VVI    I     +   D     +++ + T+N++DA   
Sbjct: 50  --IEGDVTDKQDLRRALQGSDVVIHTAAIIDVFGKAYRDTI--MKVNVKGTQNVLDACVK 105

Query: 202 AKVNHFIMVSS---LGTNKFGFPAAILN 226
           A V   +  SS   +G N +G P  I+N
Sbjct: 106 AGVRVLVYTSSMEVVGPNSYGQP--IVN 131

The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280

>gnl|CDD|187661 cd08958, FR_SDR_e, flavonoid reductase (FR), extended (e) SDRs

 Score = 43.3 bits (103), Expect = 1e-04
 Identities = 36/142 (25%), Positives = 58/142 (40%), Gaps = 31/142 (21%)

Query: 85  VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQ---MKLDGELANKGIQPV 141
           V GA+G +GS  V+ LL+ G+ VRA VR      +     K    ++L+G  A       
Sbjct: 3   VTGASGFIGSWLVKRLLQRGYTVRATVR------DPGDEKKVAHLLELEG--AK------ 48

Query: 142 EMLELVECDLEKRVQIEPALGNASVVICC-------IGASEKEVFDITGPYRIDFQATKN 194
           E L+L + DL      + A+     V              E+E+ +         + T N
Sbjct: 49  ERLKLFKADLLDYGSFDAAIDGCDGVFHVASPVDFDSEDPEEEMIEPA------VKGTLN 102

Query: 195 LVDAATIAK-VNHFIMVSSLGT 215
           +++A   AK V   +  SS+  
Sbjct: 103 VLEACAKAKSVKRVVFTSSVAA 124

This subgroup contains FRs of the extended SDR-type and related proteins. These FRs act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites; they have the characteristic active site triad of the SDRs (though not the upstream active site Asn) and a NADP-binding motif that is very similar to the typical extended SDR motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187536 cd05193, AR_like_SDR_e, aldehyde reductase, flavonoid reductase, and related proteins, extended (e) SDRs

 Score = 43.0 bits (101), Expect = 1e-04
 Identities = 37/134 (27%), Positives = 55/134 (41%), Gaps = 12/134 (8%)

Query: 83  AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVE 142
             V GA+G V S  V +LL+ G++VRA VR   +       VK++    +L  K  +   
Sbjct: 1   VLVTGASGFVASHVVEQLLERGYKVRATVRDPSK-------VKKVNHLLDLDAKPGR--- 50

Query: 143 MLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA 202
            LEL   DL      +  +   + V            D     +     T N + AA  A
Sbjct: 51  -LELAVADLTDEQSFDEVIKGCAGVFHVATPVSFSSKDPNEVIKPAIGGTLNALKAAAAA 109

Query: 203 K-VNHFIMVSSLGT 215
           K V  F++ SS G+
Sbjct: 110 KSVKRFVLTSSAGS 123

This subgroup contains aldehyde reductase and flavonoid reductase of the extended SDR-type and related proteins. Proteins in this subgroup have a complete SDR-type active site tetrad and a close match to the canonical extended SDR NADP-binding motif. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 295

>gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs

 Score = 41.6 bits (98), Expect = 4e-04
 Identities = 45/186 (24%), Positives = 66/186 (35%), Gaps = 43/186 (23%)

Query: 85  VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML 144
           V GA G +G   V +LL  G  VR  VR+ + AE                      V + 
Sbjct: 4   VTGANGFIGRALVDKLLSRGEEVRIAVRNAENAE--------------------PSVVLA 43

Query: 145 ELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGP-----YR-IDFQATKNLVDA 198
           EL + D                V+    A+   V +  G      YR ++ + T+ L  A
Sbjct: 44  ELPDIDSFTD-----LFLGVDAVVHL--AARVHVMNDQGADPLSDYRKVNTELTRRLARA 96

Query: 199 ATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVL------LWKRKAEEALIA----SGLP 248
           A    V  F+ +SS+  N  G   A  +              K +AE AL+      G+ 
Sbjct: 97  AARQGVKRFVFLSSVKVNGEGTVGAPFDETDPPAPQDAYGRSKLEAERALLELGASDGME 156

Query: 249 YTIVRP 254
             I+RP
Sbjct: 157 VVILRP 162

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303

>gnl|CDD|187572 cd05262, SDR_a7, atypical (a) SDRs, subgroup 7

 Score = 41.2 bits (97), Expect = 5e-04
 Identities = 18/37 (48%), Positives = 20/37 (54%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL 120
           FV GATG +GS  VREL+  G  V    RS   A  L
Sbjct: 4   FVTGATGFIGSAVVRELVAAGHEVVGLARSDAGAAKL 40

This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 291

>gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs

 Score = 40.9 bits (96), Expect = 7e-04
 Identities = 30/137 (21%), Positives = 52/137 (37%), Gaps = 25/137 (18%)

Query: 83  AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVE 142
             V G +G  G R V++LL+   R    VRS   A    +++                  
Sbjct: 2   VLVTGGSGFFGERLVKQLLE---RGGTYVRSFDIAP-PGEALSA------------WQHP 45

Query: 143 MLELVECDLEKRVQIEPALGNASVVICCI----GASEKEVFDITGPYRIDFQATKNLVDA 198
            +E ++ D+  R  +E AL  A  V         A  ++++       ++   T+N++DA
Sbjct: 46  NIEFLKGDITDRNDVEQALSGADCVFHTAAIVPLAGPRDLYWE-----VNVGGTQNVLDA 100

Query: 199 ATIAKVNHFIMVSSLGT 215
                V  F+  SS   
Sbjct: 101 CQRCGVQKFVYTSSSSV 117

Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331

>gnl|CDD|187577 cd05267, SDR_a6, atypical (a) SDRs, subgroup 6

 Score = 40.0 bits (94), Expect = 9e-04
 Identities = 27/116 (23%), Positives = 44/116 (37%), Gaps = 9/116 (7%)

Query: 190 QATKNLVDAATIAKVNHFIMVSSLGTN---KFGFPAAILNLFWGVLLWKRKAEEALIASG 246
           Q  +N+V A     V   I  +SLG        F           L   RK+   +  S 
Sbjct: 80  QQAENVVQAMKAVGVKRLIWTTSLGIYDEVPGKFGEWNKEFIGNYLAPYRKSAAVIENSD 139

Query: 247 LPYTIVRPGGMERPTDAYKETHNITLSQEDTLF-GGQVSNLQVAELLACMAKNRSL 301
           L YT++RP  +        +  +  L+ +   F G +VS   VA+L+  +  +   
Sbjct: 140 LDYTLLRPAWLT-----NNDEIDYELTPKGEAFKGTEVSRKSVADLITDIINHPDY 190

These atypical SDR family members of unknown function have only a partial match to a prototypical glycine-rich NAD(P)-binding motif consensus, GXXG, which conserves part of the motif of extended SDR. Furthermore, they lack the characteristic active site residues of the SDRs. This subgroup is related to phenylcoumaran benzylic ether reductase, an NADPH-dependent aromatic alcohol reductase. One member is identified as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	380
PLN03209	576	translocon at the inner envelope of chloroplast su	100.0
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	100.0
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	100.0
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	100.0
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	100.0
CHL00194	317	ycf39 Ycf39; Provisional	100.0
PLN02427	386	UDP-apiose/xylose synthase	100.0
PLN02214	342	cinnamoyl-CoA reductase	99.98
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.98
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.97
PLN02650	351	dihydroflavonol-4-reductase	99.97
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.97
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.97
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.97
PLN02572	442	UDP-sulfoquinovose synthase	99.97
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.97
PLN00198	338	anthocyanidin reductase; Provisional	99.97
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.97
PLN02583	297	cinnamoyl-CoA reductase	99.97
PLN02686	367	cinnamoyl-CoA reductase	99.97
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.97
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.97
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.97
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.97
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.96
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.96
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.96
PLN02206	442	UDP-glucuronate decarboxylase	99.96
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.96
PLN02260	668	probable rhamnose biosynthetic enzyme	99.96
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.96
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.96
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.96
PLN02240	352	UDP-glucose 4-epimerase	99.96
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.96
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.96
PLN02653	340	GDP-mannose 4,6-dehydratase	99.96
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.96
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.96
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.96
PLN02996	491	fatty acyl-CoA reductase	99.96
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.96
PRK07201	657	short chain dehydrogenase; Provisional	99.95
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.95
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.95
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.95
PLN00016	378	RNA-binding protein; Provisional	99.95
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.95
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.95
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	99.94
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.94
PRK05865	854	hypothetical protein; Provisional	99.94
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.94
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.94
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.93
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	99.93
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.93
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.93
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.93
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.93
PRK07806	248	short chain dehydrogenase; Provisional	99.92
PLN02778	298	3,5-epimerase/4-reductase	99.92
PRK12320	699	hypothetical protein; Provisional	99.92
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.92
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.92
PRK06482	276	short chain dehydrogenase; Provisional	99.92
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.92
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.92
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.92
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	99.91
PLN02503	605	fatty acyl-CoA reductase 2	99.91
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.91
PRK05875	276	short chain dehydrogenase; Provisional	99.91
PRK09135	249	pteridine reductase; Provisional	99.9
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.9
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.9
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.9
PRK08263	275	short chain dehydrogenase; Provisional	99.9
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.9
PRK12746	254	short chain dehydrogenase; Provisional	99.9
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.9
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.9
PRK07774	250	short chain dehydrogenase; Provisional	99.9
PRK07067	257	sorbitol dehydrogenase; Provisional	99.9
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.9
PRK06914	280	short chain dehydrogenase; Provisional	99.9
PRK07074	257	short chain dehydrogenase; Provisional	99.9
PRK06182	273	short chain dehydrogenase; Validated	99.89
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.89
PRK06180	277	short chain dehydrogenase; Provisional	99.89
PRK07775	274	short chain dehydrogenase; Provisional	99.89
PRK12828	239	short chain dehydrogenase; Provisional	99.89
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.89
PRK12939	250	short chain dehydrogenase; Provisional	99.89
PRK05876	275	short chain dehydrogenase; Provisional	99.89
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.89
PRK06128	300	oxidoreductase; Provisional	99.88
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.88
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.88
PRK12829	264	short chain dehydrogenase; Provisional	99.88
PRK12827	249	short chain dehydrogenase; Provisional	99.88
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.88
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.88
PRK07890	258	short chain dehydrogenase; Provisional	99.88
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.88
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.88
PRK09186	256	flagellin modification protein A; Provisional	99.88
PLN02253	280	xanthoxin dehydrogenase	99.87
PRK06138	252	short chain dehydrogenase; Provisional	99.87
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.87
PRK07326	237	short chain dehydrogenase; Provisional	99.87
PRK05717	255	oxidoreductase; Validated	99.87
PRK07478	254	short chain dehydrogenase; Provisional	99.87
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.87
PRK06179	270	short chain dehydrogenase; Provisional	99.87
PRK05993	277	short chain dehydrogenase; Provisional	99.87
PRK06194	287	hypothetical protein; Provisional	99.87
PRK07814	263	short chain dehydrogenase; Provisional	99.87
PRK09134	258	short chain dehydrogenase; Provisional	99.87
PRK07454	241	short chain dehydrogenase; Provisional	99.87
PRK07060	245	short chain dehydrogenase; Provisional	99.87
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.87
PRK08265	261	short chain dehydrogenase; Provisional	99.87
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.87
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.87
PRK07024	257	short chain dehydrogenase; Provisional	99.86
PRK07825	273	short chain dehydrogenase; Provisional	99.86
PRK07109	334	short chain dehydrogenase; Provisional	99.86
PRK08219	227	short chain dehydrogenase; Provisional	99.86
PRK12747	252	short chain dehydrogenase; Provisional	99.86
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.86
PRK10538	248	malonic semialdehyde reductase; Provisional	99.86
PRK05866	293	short chain dehydrogenase; Provisional	99.86
PRK06181	263	short chain dehydrogenase; Provisional	99.86
PRK07985	294	oxidoreductase; Provisional	99.86
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.86
PRK07063	260	short chain dehydrogenase; Provisional	99.86
PRK06123	248	short chain dehydrogenase; Provisional	99.86
PRK06196	315	oxidoreductase; Provisional	99.86
PRK06139	330	short chain dehydrogenase; Provisional	99.86
PRK05867	253	short chain dehydrogenase; Provisional	99.86
PRK08628	258	short chain dehydrogenase; Provisional	99.86
PRK08643	256	acetoin reductase; Validated	99.86
PLN02260	668	probable rhamnose biosynthetic enzyme	99.86
PRK07904	253	short chain dehydrogenase; Provisional	99.86
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.86
PRK12743	256	oxidoreductase; Provisional	99.86
PRK07035	252	short chain dehydrogenase; Provisional	99.86
PRK06500	249	short chain dehydrogenase; Provisional	99.86
PRK08589	272	short chain dehydrogenase; Validated	99.86
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.86
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.86
PRK08339	263	short chain dehydrogenase; Provisional	99.86
PRK09291	257	short chain dehydrogenase; Provisional	99.85
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.85
PRK06523	260	short chain dehydrogenase; Provisional	99.85
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.85
PRK06114	254	short chain dehydrogenase; Provisional	99.85
PRK06841	255	short chain dehydrogenase; Provisional	99.85
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.85
PRK06701	290	short chain dehydrogenase; Provisional	99.85
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.85
PRK05650	270	short chain dehydrogenase; Provisional	99.85
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.85
PRK12937	245	short chain dehydrogenase; Provisional	99.85
PRK06172	253	short chain dehydrogenase; Provisional	99.85
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.85
PRK12744	257	short chain dehydrogenase; Provisional	99.85
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.85
PRK06398	258	aldose dehydrogenase; Validated	99.85
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.85
PRK06949	258	short chain dehydrogenase; Provisional	99.84
PRK07856	252	short chain dehydrogenase; Provisional	99.84
PRK08267	260	short chain dehydrogenase; Provisional	99.84
PRK12742	237	oxidoreductase; Provisional	99.84
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.84
PRK05693	274	short chain dehydrogenase; Provisional	99.84
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.84
PRK06101	240	short chain dehydrogenase; Provisional	99.84
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.84
PRK08251	248	short chain dehydrogenase; Provisional	99.84
PRK07576	264	short chain dehydrogenase; Provisional	99.84
PRK09242	257	tropinone reductase; Provisional	99.84
PRK06197	306	short chain dehydrogenase; Provisional	99.83
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.83
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.83
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.83
PRK07102	243	short chain dehydrogenase; Provisional	99.83
PRK06198	260	short chain dehydrogenase; Provisional	99.83
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.83
PRK07041	230	short chain dehydrogenase; Provisional	99.83
PRK08017	256	oxidoreductase; Provisional	99.83
PRK07577	234	short chain dehydrogenase; Provisional	99.83
PRK07677	252	short chain dehydrogenase; Provisional	99.83
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.83
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.83
PRK08226	263	short chain dehydrogenase; Provisional	99.83
PRK08264	238	short chain dehydrogenase; Validated	99.83
PRK05872	296	short chain dehydrogenase; Provisional	99.83
PRK08324	681	short chain dehydrogenase; Validated	99.82
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.82
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.82
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.82
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.82
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.82
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	99.82
PRK07062	265	short chain dehydrogenase; Provisional	99.82
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.82
PRK09072	263	short chain dehydrogenase; Provisional	99.82
PRK07069	251	short chain dehydrogenase; Validated	99.82
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	99.82
PRK06940	275	short chain dehydrogenase; Provisional	99.82
PRK06057	255	short chain dehydrogenase; Provisional	99.82
PRK08278	273	short chain dehydrogenase; Provisional	99.82
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.81
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.81
PRK08703	239	short chain dehydrogenase; Provisional	99.81
PRK07832	272	short chain dehydrogenase; Provisional	99.81
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.81
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	99.81
PRK06483	236	dihydromonapterin reductase; Provisional	99.81
PRK06484	520	short chain dehydrogenase; Validated	99.81
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.81
PRK06125	259	short chain dehydrogenase; Provisional	99.81
PRK07791	286	short chain dehydrogenase; Provisional	99.81
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.8
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.8
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.8
PRK07831	262	short chain dehydrogenase; Provisional	99.8
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.8
PRK05884	223	short chain dehydrogenase; Provisional	99.8
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.8
PRK06924	251	short chain dehydrogenase; Provisional	99.8
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.8
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.8
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.8
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.8
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.8
PRK05855	582	short chain dehydrogenase; Validated	99.8
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.8
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.8
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.79
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.79
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.79
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.79
PRK07023	243	short chain dehydrogenase; Provisional	99.79
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.79
PRK07201	657	short chain dehydrogenase; Provisional	99.79
PRK05854	313	short chain dehydrogenase; Provisional	99.79
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.78
PRK06953	222	short chain dehydrogenase; Provisional	99.78
PRK12367	245	short chain dehydrogenase; Provisional	99.78
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.78
PLN02780	320	ketoreductase/ oxidoreductase	99.78
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	99.77
COG2910	211	Putative NADH-flavin reductase [General function p	99.77
PRK08303	305	short chain dehydrogenase; Provisional	99.77
PRK05599	246	hypothetical protein; Provisional	99.77
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.75
PRK06484	520	short chain dehydrogenase; Validated	99.75
PRK07578	199	short chain dehydrogenase; Provisional	99.75
PRK08177	225	short chain dehydrogenase; Provisional	99.74
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.74
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.74
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	99.73
KOG0725	270	consensus Reductases with broad range of substrate	99.72
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.71
PRK08862	227	short chain dehydrogenase; Provisional	99.71
PLN00015	308	protochlorophyllide reductase	99.7
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.7
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.68
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.68
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.66
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.66
KOG1208	314	consensus Dehydrogenases with different specificit	99.65
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	99.64
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.63
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.61
KOG4288	283	consensus Predicted oxidoreductase [General functi	99.59
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.59
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.57
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.56
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.56
COG1028	251	FabG Dehydrogenases with different specificities (	99.55
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	99.54
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.52
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.48
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.46
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.44
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.4
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.39
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	99.37
PRK06720	169	hypothetical protein; Provisional	99.29
KOG2774	366	consensus NAD dependent epimerase [General functio	99.27
PRK08309	177	short chain dehydrogenase; Provisional	99.24
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.1
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.05
PTZ00325	321	malate dehydrogenase; Provisional	99.01
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.92
KOG3019	315	consensus Predicted nucleoside-diphosphate sugar e	98.91
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	98.85
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	98.83
PLN00106	323	malate dehydrogenase	98.82
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	98.73
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.69
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.64
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.6
PRK05086	312	malate dehydrogenase; Provisional	98.53
PRK09620	229	hypothetical protein; Provisional	98.48
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	98.44
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.41
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	98.37
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.34
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	98.34
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	98.29
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	98.28
PRK14982	340	acyl-ACP reductase; Provisional	98.26
COG3268	382	Uncharacterized conserved protein [Function unknow	98.24
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.21
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.1
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.06
COG0569	225	TrkA K+ transport systems, NAD-binding component [	98.05
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.97
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	97.94
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	97.94
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	97.92
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.88
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	97.86
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.85
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.8
PRK09496	453	trkA potassium transporter peripheral membrane com	97.8
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	97.78
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.77
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.77
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	97.76
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	97.75
PLN00112	444	malate dehydrogenase (NADP); Provisional	97.74
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	97.74
PRK04148	134	hypothetical protein; Provisional	97.73
PRK05442	326	malate dehydrogenase; Provisional	97.71
PTZ00117	319	malate dehydrogenase; Provisional	97.67
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	97.64
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	97.64
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.63
PTZ00082	321	L-lactate dehydrogenase; Provisional	97.61
PRK06223	307	malate dehydrogenase; Reviewed	97.59
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	97.57
PRK09496	453	trkA potassium transporter peripheral membrane com	97.57
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	97.56
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	97.54
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	97.52
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	97.51
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.45
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	97.44
COG4982	866	3-oxoacyl-[acyl-carrier protein]	97.44
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	97.43
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	97.42
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	97.42
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	97.4
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	97.4
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	97.39
PLN02602	350	lactate dehydrogenase	97.38
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	97.38
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	97.37
PRK15116	268	sulfur acceptor protein CsdL; Provisional	97.37
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	97.37
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	97.36
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	97.36
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	97.36
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.35
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	97.35
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	97.35
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	97.3
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	97.3
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	97.3
PRK08223	287	hypothetical protein; Validated	97.29
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	97.28
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.28
PRK03659	601	glutathione-regulated potassium-efflux system prot	97.26
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	97.25
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	97.22
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	97.22
PRK10669	558	putative cation:proton antiport protein; Provision	97.22
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	97.21
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	97.21
PRK08328	231	hypothetical protein; Provisional	97.21
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	97.19
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	97.16
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	97.16
cd01339	300	LDH-like_MDH L-lactate dehydrogenase-like malate d	97.12
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	97.12
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	97.08
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	97.07
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.06
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.05
PRK03562	621	glutathione-regulated potassium-efflux system prot	97.04
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.03
PF08732	410	HIM1: HIM1; InterPro: IPR014843 HIM1 (high inducti	97.02
COG1004	414	Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en	96.99
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	96.98
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.98
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.98
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	96.97
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	96.96
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	96.96
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	96.95
PRK07877	722	hypothetical protein; Provisional	96.93
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.91
PRK00048	257	dihydrodipicolinate reductase; Provisional	96.9
PLN02383	344	aspartate semialdehyde dehydrogenase	96.9
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	96.89
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.89
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.89
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	96.88
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.88
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.86
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.85
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	96.84
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	96.81
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	96.8
TIGR01771	299	L-LDH-NAD L-lactate dehydrogenase. This model repr	96.78
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.77
PRK07411	390	hypothetical protein; Validated	96.75
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	96.72
PRK08655	437	prephenate dehydrogenase; Provisional	96.71
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	96.71
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.7
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.68
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.68
PRK08057	248	cobalt-precorrin-6x reductase; Reviewed	96.67
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	96.66
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.66
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	96.66
PRK14851	679	hypothetical protein; Provisional	96.65
PRK07531	495	bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe	96.65
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.64
PRK14852	989	hypothetical protein; Provisional	96.62
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.61
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.59
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	96.59
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.58
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	96.58
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	96.57
PLN02353	473	probable UDP-glucose 6-dehydrogenase	96.55
PRK06130	311	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.53
PRK13302	271	putative L-aspartate dehydrogenase; Provisional	96.53
KOG2018	430	consensus Predicted dinucleotide-utilizing enzyme	96.49
cd01491	286	Ube1_repeat1 Ubiquitin activating enzyme (E1), rep	96.48
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	96.48
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	96.45
PRK06153	393	hypothetical protein; Provisional	96.44
TIGR02717	447	AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP	96.42
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.39
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	96.39
PRK00094	325	gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr	96.38
PLN00203	519	glutamyl-tRNA reductase	96.38
PRK06849	389	hypothetical protein; Provisional	96.38
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.36
PF10100	429	DUF2338: Uncharacterized protein conserved in bact	96.35
COG2130	340	Putative NADP-dependent oxidoreductases [General f	96.32
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.32
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	96.28
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	96.26
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	96.25
KOG1494	345	consensus NAD-dependent malate dehydrogenase [Ener	96.24
PRK07530	292	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.24
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	96.24
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	96.22
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.22
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	96.2
PRK15057	388	UDP-glucose 6-dehydrogenase; Provisional	96.2
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.2
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	96.18
COG1023	300	Gnd Predicted 6-phosphogluconate dehydrogenase [Ca	96.18
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	96.17
PRK09599	301	6-phosphogluconate dehydrogenase-like protein; Rev	96.17
PRK10537	393	voltage-gated potassium channel; Provisional	96.16
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	96.13
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	96.13
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.13
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	96.12
TIGR01019	286	sucCoAalpha succinyl-CoA synthetase, alpha subunit	96.11
PF13380	116	CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5	96.1
PRK06522	304	2-dehydropantoate 2-reductase; Reviewed	96.09
PRK06035	291	3-hydroxyacyl-CoA dehydrogenase; Validated	96.08
TIGR00978	341	asd_EA aspartate-semialdehyde dehydrogenase (non-p	96.05
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	96.05
PRK11880	267	pyrroline-5-carboxylate reductase; Reviewed	96.04
COG0002	349	ArgC Acetylglutamate semialdehyde dehydrogenase [A	96.04
TIGR03693	637	ocin_ThiF_like putative thiazole-containing bacter	96.03
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	96.03
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	96.03
PRK07417	279	arogenate dehydrogenase; Reviewed	96.02
PF02571	249	CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro:	96.01
TIGR01724	341	hmd_rel H2-forming N(5),N(10)-methenyltetrahydrome	96.01
PRK08040	336	putative semialdehyde dehydrogenase; Provisional	96.0
PLN02586	360	probable cinnamyl alcohol dehydrogenase	95.99
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	95.98
PRK12921	305	2-dehydropantoate 2-reductase; Provisional	95.98
PRK15461	296	NADH-dependent gamma-hydroxybutyrate dehydrogenase	95.96

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=100.00  E-value=1.5e-47  Score=379.48  Aligned_cols=375  Identities=76%  Similarity=1.108  Sum_probs=316.7

Q ss_pred             CCcccccccccccccCCCCcCcccccccccceeeeccCCCCCCCCcccccccceecccCCccccccccCCCCCCCCCCCC
Q 016901            1 MEICSLQSQTLSTIPSPLSRNGLIVKSFGSCQILKFPSSKKFSHPRKLKLPDFKAQASGTINICSEAVGATPTKADSKDD   80 (380)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (380)
                      ||-|++|+.+++++|..+.+|.++.++|.+.++.+++.+..+++.|+++.+++.+.+++...+..++.++.+....++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g   80 (576)
T PLN03209          1 MEGTSLQSSAITTIPTSLTKCGFIEKPFLHGQLLRFPGFSKHPHSRKLRSLDIKAQASGATKFSSAAIEAIPKELDTKDE   80 (576)
T ss_pred             CCcccccccccccccccccccccccCcccccceeeccccccCcccccccccchhhccccchhhhhhhhhccccccccCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999888888888887788889


Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      ++||||||+|+||++++++|+++|++|++++|+.++...+.+.+..+++..    .+.....+++++.+|++|.+++.++
T Consensus        81 KvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~----~Ga~~~~~v~iV~gDLtD~esI~~a  156 (576)
T PLN03209         81 DLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDV----EGTQPVEKLEIVECDLEKPDQIGPA  156 (576)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhcccc----ccccccCceEEEEecCCCHHHHHHH
Confidence            999999999999999999999999999999999988777665554332210    0111124689999999999999999


Q ss_pred             hcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCCchhhhchhhHHHHHHHHHHH
Q 016901          161 LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEE  240 (380)
Q Consensus       161 ~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~  240 (380)
                      ++++|+||||+|.......++...+++|+.|+.+++++|++.+++|||++||+++...+.+....+...+|...|..+|+
T Consensus       157 LggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~g~p~~~~~sk~~~~~~KraaE~  236 (576)
T PLN03209        157 LGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVGFPAAILNLFWGVLCWKRKAEE  236 (576)
T ss_pred             hcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhcccCccccchhhHHHHHHHHHHHHH
Confidence            99999999999865433334455688999999999999999999999999998874333222223455678899999999


Q ss_pred             HHHHCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHHHHhCCCCccCcEEEEecCCCCCcchH
Q 016901          241 ALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPM  320 (380)
Q Consensus       241 ~l~~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~  320 (380)
                      ++.++|++|++||||+++++.+.+.....+.....+...++.+.++|||+++++++.++....+++|++.++......++
T Consensus       237 ~L~~sGIrvTIVRPG~L~tp~d~~~~t~~v~~~~~d~~~gr~isreDVA~vVvfLasd~~as~~kvvevi~~~~~p~~~~  316 (576)
T PLN03209        237 ALIASGLPYTIVRPGGMERPTDAYKETHNLTLSEEDTLFGGQVSNLQVAELMACMAKNRRLSYCKVVEVIAETTAPLTPM  316 (576)
T ss_pred             HHHHcCCCEEEEECCeecCCccccccccceeeccccccCCCccCHHHHHHHHHHHHcCchhccceEEEEEeCCCCCCCCH
Confidence            99999999999999999988554322333333333344567799999999999999987657799999999998888999


Q ss_pred             HHHHHhcCCCCCCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCCCCCC
Q 016901          321 EELLAKIPSQRAEPKESIAPEKSDPAASKSMISEESSAPITEEPVQTKAKVTDPLSPYT  379 (380)
Q Consensus       321 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  379 (380)
                      .+++..+-.++..++.......+.++|...++++.++...++++.+++++.++|||||+
T Consensus       317 ~~~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  375 (576)
T PLN03209        317 EELLAKIPSQRVPPKESDAADGPKPVPTKPVTPEAPSPPIEEEPPQPKAVVPRPLSPYT  375 (576)
T ss_pred             HHHHHhcccccCCCCcccccccCCCCCCcccCCCCCCCcccccCCCCcCCCCCCCCCcc
Confidence            99999998888888887778888999999999999999999999999999999999998

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=1.9e-33  Score=253.35  Aligned_cols=233  Identities=18%  Similarity=0.131  Sum_probs=183.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCc-eEEEEcCCCChhcHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM-LELVECDLEKRVQIEP  159 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~Dl~d~~~~~~  159 (380)
                      |+||||||+||||+|.+.+|++.|++|++++.-.....+...                   .. ..+++||+.|.+.+.+
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~-------------------~~~~~f~~gDi~D~~~L~~   61 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALL-------------------KLQFKFYEGDLLDRALLTA   61 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhh-------------------hccCceEEeccccHHHHHH
Confidence            579999999999999999999999999999874432222211                   12 6899999999999999


Q ss_pred             Hhc--CCCEEEEcccc--CccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCC-----CchhhhchhhH
Q 016901          160 ALG--NASVVICCIGA--SEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNLFWG  230 (380)
Q Consensus       160 a~~--~~d~Vi~~Ag~--~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~-----~~~~~~~~~~~  230 (380)
                      +|.  .+|+|||+||.  ++++..++.++++.|+.||.+|+++|++.++++|||.||+.++...     .+..+..+.++
T Consensus        62 vf~~~~idaViHFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~PI~E~~~~~p~NP  141 (329)
T COG1087          62 VFEENKIDAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSPISETSPLAPINP  141 (329)
T ss_pred             HHHhcCCCEEEECccccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcccCCCCCCCCCCc
Confidence            995  59999999994  4677788899999999999999999999999999999998884321     12235667889


Q ss_pred             HHHHHHHHHHHHHH----CCCCEEEEecCcccCCCcc--cc-----cccce--------------ee-c-----cCCccc
Q 016901          231 VLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDA--YK-----ETHNI--------------TL-S-----QEDTLF  279 (380)
Q Consensus       231 Y~~sK~~~E~~l~~----~g~~~~ivRpg~v~gp~~~--~~-----~~~~~--------------~~-~-----~~~~~~  279 (380)
                      ||.||++.|++++.    ++++++++|..++.|....  ..     .+..+              .+ +     .++.-.
T Consensus       142 YG~sKlm~E~iL~d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~i  221 (329)
T COG1087         142 YGRSKLMSEEILRDAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCI  221 (329)
T ss_pred             chhHHHHHHHHHHHHHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCee
Confidence            99999999999974    7899999999999875321  11     11111              11 1     122233


Q ss_pred             CCCCCHHHHHHHHHHHHhCCCCcc-CcEEEEecCCCCCcchHHHHHHhcCCCCC
Q 016901          280 GGQVSNLQVAELLACMAKNRSLSY-CKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (380)
Q Consensus       280 ~~~i~~~DvA~~i~~~l~~~~~~~-~~~~ni~~~~~~s~~~~~e~~~~~~~~~~  332 (380)
                      +++||+.|+|++.+.+++.-.... ..+||+++|...|..|+.+.+.++.|...
T Consensus       222 RDYIHV~DLA~aH~~Al~~L~~~g~~~~~NLG~G~G~SV~evi~a~~~vtg~~i  275 (329)
T COG1087         222 RDYIHVDDLADAHVLALKYLKEGGSNNIFNLGSGNGFSVLEVIEAAKKVTGRDI  275 (329)
T ss_pred             eeeeehhHHHHHHHHHHHHHHhCCceeEEEccCCCceeHHHHHHHHHHHhCCcC
Confidence            468999999999999987533211 36999999999999999999999999543

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=100.00  E-value=7.2e-33  Score=267.28  Aligned_cols=243  Identities=15%  Similarity=0.029  Sum_probs=181.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHH-HhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSV-KQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      .+|+|||||||||||++|+++|+++|++|++++|...........+ ...         +.....++.++.+|++|.+.+
T Consensus        14 ~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~Di~d~~~l   84 (348)
T PRK15181         14 APKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSV---------SEEQWSRFIFIQGDIRKFTDC   84 (348)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhcc---------ccccCCceEEEEccCCCHHHH
Confidence            5689999999999999999999999999999998654322111111 000         001114688999999999999


Q ss_pred             HHHhcCCCEEEEccccCcc--ccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCC-----chhhhchhhH
Q 016901          158 EPALGNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF-----PAAILNLFWG  230 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag~~~~--~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~-----~~~~~~~~~~  230 (380)
                      .++++++|+|||+|+....  ...++...+++|+.|+.+++++|++.++++|||+||.+++....     ++.+..+.+.
T Consensus        85 ~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~p~~~  164 (348)
T PRK15181         85 QKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSP  164 (348)
T ss_pred             HHHhhCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCCCCCCCCCCCCCCh
Confidence            9999999999999986432  22334456889999999999999999999999999987754211     1123346678


Q ss_pred             HHHHHHHHHHHHH----HCCCCEEEEecCcccCCCccccc---------------ccceeeccCCcccCCCCCHHHHHHH
Q 016901          231 VLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKE---------------THNITLSQEDTLFGGQVSNLQVAEL  291 (380)
Q Consensus       231 Y~~sK~~~E~~l~----~~g~~~~ivRpg~v~gp~~~~~~---------------~~~~~~~~~~~~~~~~i~~~DvA~~  291 (380)
                      |+.+|..+|.+++    ++|++++++||+++|||++....               ...+.+........+++|++|+|++
T Consensus       165 Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~a  244 (348)
T PRK15181        165 YAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQA  244 (348)
T ss_pred             hhHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHHH
Confidence            9999999998875    36999999999999999753210               1111222223333468999999999


Q ss_pred             HHHHHhCCC-CccCcEEEEecCCCCCcchHHHHHHhcCCC
Q 016901          292 LACMAKNRS-LSYCKVVEVIAETTAPLTPMEELLAKIPSQ  330 (380)
Q Consensus       292 i~~~l~~~~-~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~  330 (380)
                      ++.++.... ...+++||+++++..|+.|+++.+.+..+.
T Consensus       245 ~~~~~~~~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~~~  284 (348)
T PRK15181        245 NLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNL  284 (348)
T ss_pred             HHHHHhcccccCCCCEEEecCCCcEeHHHHHHHHHHHhCc
Confidence            998876532 135789999999999999999999988763

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=100.00  E-value=3.3e-32  Score=251.71  Aligned_cols=246  Identities=20%  Similarity=0.226  Sum_probs=184.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ++++|+||||+||||+||++.||++||+|++.+|++++.... +.+.++  .+        ..+++..+.+|++|.+++.
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~-~~L~~l--~~--------a~~~l~l~~aDL~d~~sf~   73 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKT-EHLRKL--EG--------AKERLKLFKADLLDEGSFD   73 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhH-HHHHhc--cc--------CcccceEEeccccccchHH
Confidence            678999999999999999999999999999999999874331 112221  11        1256999999999999999


Q ss_pred             HHhcCCCEEEEccccCccccCCCC-CcchhhHHHHHHHHHHHHHcC-CCEEEEEccCCCCCCC----Cc------hhh--
Q 016901          159 PALGNASVVICCIGASEKEVFDIT-GPYRIDFQATKNLVDAATIAK-VNHFIMVSSLGTNKFG----FP------AAI--  224 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~~~~~~~~-~~~~~nv~g~~~ll~a~~~~~-v~r~V~~SS~~~~~~~----~~------~~~--  224 (380)
                      +++++||.|||+|.+...+..+++ +..+.++.|+.|++++|++.. |+||||.||+++..+.    .+      ..+  
T Consensus        74 ~ai~gcdgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd  153 (327)
T KOG1502|consen   74 KAIDGCDGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSD  153 (327)
T ss_pred             HHHhCCCEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCc
Confidence            999999999999998776655544 568999999999999999988 9999999997653221    11      111  


Q ss_pred             ----hchhhHHHHHHHHHHHHHH----HCCCCEEEEecCcccCCCcccccccce------e---eccCCcccCCCCCHHH
Q 016901          225 ----LNLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKETHNI------T---LSQEDTLFGGQVSNLQ  287 (380)
Q Consensus       225 ----~~~~~~Y~~sK~~~E~~l~----~~g~~~~ivRpg~v~gp~~~~~~~~~~------~---~~~~~~~~~~~i~~~D  287 (380)
                          ......|..+|..+|+...    +.|++.+.|.|+.|+||..........      .   .......+..+||++|
T Consensus       154 ~~~~~~~~~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~n~~~~~VdVrD  233 (327)
T KOG1502|consen  154 LDFCRCKKLWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYPNFWLAFVDVRD  233 (327)
T ss_pred             HHHHHhhHHHHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCCCCceeeEeHHH
Confidence                1122469999999998765    478999999999999997543111100      0   1112222334799999


Q ss_pred             HHHHHHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCCCCCCCcccC
Q 016901          288 VAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPKESI  338 (380)
Q Consensus       288 vA~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~~~~~~~~  338 (380)
                      ||.+.+.+++++..  .+.|.+.++... ..|+++++.+.+.....+....
T Consensus       234 VA~AHv~a~E~~~a--~GRyic~~~~~~-~~ei~~~l~~~~P~~~ip~~~~  281 (327)
T KOG1502|consen  234 VALAHVLALEKPSA--KGRYICVGEVVS-IKEIADILRELFPDYPIPKKNA  281 (327)
T ss_pred             HHHHHHHHHcCccc--CceEEEecCccc-HHHHHHHHHHhCCCCCCCCCCC
Confidence            99999999999884  466655555544 8999999999988776554443

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=100.00  E-value=1.9e-32  Score=255.68  Aligned_cols=234  Identities=21%  Similarity=0.181  Sum_probs=177.0

Q ss_pred             EEEcCCChHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHHh
Q 016901           84 FVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPAL  161 (380)
Q Consensus        84 lVtGatG~iG~~lv~~Ll~~G--~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a~  161 (380)
                      |||||+||||++|+++|+++|  ++|+++++.+......  .+              ...+..+++.+|++|.+++.+++
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~--~~--------------~~~~~~~~~~~Di~d~~~l~~a~   64 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLK--DL--------------QKSGVKEYIQGDITDPESLEEAL   64 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccch--hh--------------hcccceeEEEeccccHHHHHHHh
Confidence            699999999999999999999  7999999876543210  00              01134459999999999999999


Q ss_pred             cCCCEEEEccccCcccc-CCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCC---CC------chh--hhchhh
Q 016901          162 GNASVVICCIGASEKEV-FDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKF---GF------PAA--ILNLFW  229 (380)
Q Consensus       162 ~~~d~Vi~~Ag~~~~~~-~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~---~~------~~~--~~~~~~  229 (380)
                      +++|+|||+|+...... ...+..+++|+.||+|++++|++.+++||||+||.++...   +.      +..  +.....
T Consensus        65 ~g~d~V~H~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~  144 (280)
T PF01073_consen   65 EGVDVVFHTAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLD  144 (280)
T ss_pred             cCCceEEEeCccccccCcccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCcccccccC
Confidence            99999999999765443 3445568999999999999999999999999999876332   11      111  122455


Q ss_pred             HHHHHHHHHHHHHHH-C--------CCCEEEEecCcccCCCccccc--------cc--ceeeccCCcccCCCCCHHHHHH
Q 016901          230 GVLLWKRKAEEALIA-S--------GLPYTIVRPGGMERPTDAYKE--------TH--NITLSQEDTLFGGQVSNLQVAE  290 (380)
Q Consensus       230 ~Y~~sK~~~E~~l~~-~--------g~~~~ivRpg~v~gp~~~~~~--------~~--~~~~~~~~~~~~~~i~~~DvA~  290 (380)
                      .|+.||..+|+++.+ .        .+.+++|||..||||++....        .+  .+.++ ......++++++|+|.
T Consensus       145 ~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~~g~~~~~~g-~~~~~~~~vyV~NvA~  223 (280)
T PF01073_consen  145 PYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKMVRSGLFLFQIG-DGNNLFDFVYVENVAH  223 (280)
T ss_pred             chHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccchhhHHHHhcccceeec-CCCceECcEeHHHHHH
Confidence            799999999999874 2        288999999999999864321        11  11222 2223346899999999


Q ss_pred             HHHHHHhC---C---CCccCcEEEEecCCCCC-cchHHHHHHhcCCCCCCC
Q 016901          291 LLACMAKN---R---SLSYCKVVEVIAETTAP-LTPMEELLAKIPSQRAEP  334 (380)
Q Consensus       291 ~i~~~l~~---~---~~~~~~~~ni~~~~~~s-~~~~~e~~~~~~~~~~~~  334 (380)
                      +++.++++   +   ....|+.|+|.+++..+ ..++...+-+.+|.....
T Consensus       224 ahvlA~~~L~~~~~~~~~~G~~y~itd~~p~~~~~~f~~~~~~~~G~~~~~  274 (280)
T PF01073_consen  224 AHVLAAQALLEPGKPERVAGQAYFITDGEPVPSFWDFMRPLWEALGYPPPK  274 (280)
T ss_pred             HHHHHHHHhccccccccCCCcEEEEECCCccCcHHHHHHHHHHHCCCCCCc
Confidence            99888653   2   33579999999999987 788888888888875544

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>CHL00194 ycf39 Ycf39; Provisional

Probab=100.00  E-value=1.1e-31  Score=255.89  Aligned_cols=219  Identities=25%  Similarity=0.341  Sum_probs=176.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      |+|+|||||||||++++++|+++||+|++++|+.++...+..                   .+++++.+|++|++++.++
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~-------------------~~v~~v~~Dl~d~~~l~~a   61 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKE-------------------WGAELVYGDLSLPETLPPS   61 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhh-------------------cCCEEEECCCCCHHHHHHH
Confidence            579999999999999999999999999999999765433221                   4689999999999999999


Q ss_pred             hcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCCchhhhchhhHHHHHHHHHHH
Q 016901          161 LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEE  240 (380)
Q Consensus       161 ~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~  240 (380)
                      +.++|+|||+++...   .+....+++|+.++.+++++|++.|++||||+||.++..++        ..+|..+|..+|+
T Consensus        62 l~g~d~Vi~~~~~~~---~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~~~~--------~~~~~~~K~~~e~  130 (317)
T CHL00194         62 FKGVTAIIDASTSRP---SDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAEQYP--------YIPLMKLKSDIEQ  130 (317)
T ss_pred             HCCCCEEEECCCCCC---CCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccccccccC--------CChHHHHHHHHHH
Confidence            999999999976432   23344678899999999999999999999999997653321        1358899999999


Q ss_pred             HHHHCCCCEEEEecCcccCCCc-ccc----cccceeeccCCcccCCCCCHHHHHHHHHHHHhCCCCccCcEEEEecCCCC
Q 016901          241 ALIASGLPYTIVRPGGMERPTD-AYK----ETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTA  315 (380)
Q Consensus       241 ~l~~~g~~~~ivRpg~v~gp~~-~~~----~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~~~~~~~~~ni~~~~~~  315 (380)
                      ++++++++++++||+.+|+... .+.    ......+..+ ....++||++|+|++++.+++++. ..+++||+++++..
T Consensus       131 ~l~~~~l~~tilRp~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~v~Dva~~~~~~l~~~~-~~~~~~ni~g~~~~  208 (317)
T CHL00194        131 KLKKSGIPYTIFRLAGFFQGLISQYAIPILEKQPIWITNE-STPISYIDTQDAAKFCLKSLSLPE-TKNKTFPLVGPKSW  208 (317)
T ss_pred             HHHHcCCCeEEEeecHHhhhhhhhhhhhhccCCceEecCC-CCccCccCHHHHHHHHHHHhcCcc-ccCcEEEecCCCcc
Confidence            9999999999999998886421 000    0111112222 222368999999999999998765 46899999999999


Q ss_pred             CcchHHHHHHhcCCCC
Q 016901          316 PLTPMEELLAKIPSQR  331 (380)
Q Consensus       316 s~~~~~e~~~~~~~~~  331 (380)
                      |..|+++.+.++.|.+
T Consensus       209 s~~el~~~~~~~~g~~  224 (317)
T CHL00194        209 NSSEIISLCEQLSGQK  224 (317)
T ss_pred             CHHHHHHHHHHHhCCC
Confidence            9999999999999875

>PLN02427 UDP-apiose/xylose synthase

Probab=100.00  E-value=1.5e-31  Score=261.56  Aligned_cols=239  Identities=15%  Similarity=0.135  Sum_probs=177.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~-G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +.|+|||||||||||++|+++|+++ |++|++++|+.++...+...    +        ...+..+++++.+|++|.+.+
T Consensus        13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~----~--------~~~~~~~~~~~~~Dl~d~~~l   80 (386)
T PLN02427         13 KPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEP----D--------TVPWSGRIQFHRINIKHDSRL   80 (386)
T ss_pred             cCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhcc----c--------cccCCCCeEEEEcCCCChHHH
Confidence            5678999999999999999999998 59999999886654432210    0        001124799999999999999


Q ss_pred             HHHhcCCCEEEEccccCcccc--CCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCC-----chhh------
Q 016901          158 EPALGNASVVICCIGASEKEV--FDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF-----PAAI------  224 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag~~~~~~--~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~-----~~~~------  224 (380)
                      .++++++|+|||+|+......  .++...+..|+.++.+++++|++.+ ++|||+||..++....     +..+      
T Consensus        81 ~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~-~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~  159 (386)
T PLN02427         81 EGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDHPLRQDPA  159 (386)
T ss_pred             HHHhhcCCEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC-CEEEEEeeeeeeCCCcCCCCCcccccccccc
Confidence            999999999999998643211  2223346789999999999999887 7999999987643210     0000      


Q ss_pred             ----------------hchhhHHHHHHHHHHHHHHH----CCCCEEEEecCcccCCCccccc------------------
Q 016901          225 ----------------LNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE------------------  266 (380)
Q Consensus       225 ----------------~~~~~~Y~~sK~~~E~~l~~----~g~~~~ivRpg~v~gp~~~~~~------------------  266 (380)
                                      ..+.+.|+.+|..+|++++.    +|++++++||+++|||++....                  
T Consensus       160 ~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~  239 (386)
T PLN02427        160 FYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSN  239 (386)
T ss_pred             cccccccccccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHH
Confidence                            01235799999999999864    6899999999999999753100                  


Q ss_pred             ----ccceeeccCCcccCCCCCHHHHHHHHHHHHhCCCCccCcEEEEecC-CCCCcchHHHHHHhcCCC
Q 016901          267 ----THNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAE-TTAPLTPMEELLAKIPSQ  330 (380)
Q Consensus       267 ----~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~~~~~~~~~ni~~~-~~~s~~~~~e~~~~~~~~  330 (380)
                          ...+.+........++||++|+|++++.+++++....+++||++++ +..++.|+++.+.++++.
T Consensus       240 ~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g~  308 (386)
T PLN02427        240 NLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYAK  308 (386)
T ss_pred             HHhcCCCeEEECCCCceECcEeHHHHHHHHHHHHhCcccccCceEEeCCCCCCccHHHHHHHHHHHhcc
Confidence                0011111122223368999999999999998764234789999998 588999999999999875

>PLN02214 cinnamoyl-CoA reductase

Probab=99.98  E-value=1.4e-30  Score=250.73  Aligned_cols=235  Identities=20%  Similarity=0.164  Sum_probs=175.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      .++|+||||||+||||++++++|+++|++|++++|+.++....  .+..+.          ....+++++.+|++|.+++
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~--~~~~~~----------~~~~~~~~~~~Dl~d~~~~   75 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNT--HLRELE----------GGKERLILCKADLQDYEAL   75 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHH--HHHHhh----------CCCCcEEEEecCcCChHHH
Confidence            3567999999999999999999999999999999987643211  011110          0014688999999999999


Q ss_pred             HHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCC-CCCCC--Cc-----hh------
Q 016901          158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG-TNKFG--FP-----AA------  223 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~-~~~~~--~~-----~~------  223 (380)
                      .++++++|+|||+|+...   .++...+++|+.|+.+++++|++.+++||||+||.+ ++...  .+     +.      
T Consensus        76 ~~~~~~~d~Vih~A~~~~---~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~  152 (342)
T PLN02214         76 KAAIDGCDGVFHTASPVT---DDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLD  152 (342)
T ss_pred             HHHHhcCCEEEEecCCCC---CCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChh
Confidence            999999999999998652   234455889999999999999999999999999964 43211  11     11      


Q ss_pred             -hhchhhHHHHHHHHHHHHHHH----CCCCEEEEecCcccCCCcccccccc------eeecc---CCcccCCCCCHHHHH
Q 016901          224 -ILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKETHN------ITLSQ---EDTLFGGQVSNLQVA  289 (380)
Q Consensus       224 -~~~~~~~Y~~sK~~~E~~l~~----~g~~~~ivRpg~v~gp~~~~~~~~~------~~~~~---~~~~~~~~i~~~DvA  289 (380)
                       +.++.+.|+.+|..+|++++.    .|++++++||++||||+........      ...+.   ......++||++|+|
T Consensus       153 ~~~~p~~~Y~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~V~Dva  232 (342)
T PLN02214        153 FCKNTKNWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVA  232 (342)
T ss_pred             hccccccHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccCCCCCcCeeEHHHHH
Confidence             122456799999999998863    6999999999999999753210000      00010   111234789999999


Q ss_pred             HHHHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCCC
Q 016901          290 ELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQ  330 (380)
Q Consensus       290 ~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~  330 (380)
                      ++++.+++++..  ++.||+++ ...++.++++.+.+.++.
T Consensus       233 ~a~~~al~~~~~--~g~yn~~~-~~~~~~el~~~i~~~~~~  270 (342)
T PLN02214        233 LAHVLVYEAPSA--SGRYLLAE-SARHRGEVVEILAKLFPE  270 (342)
T ss_pred             HHHHHHHhCccc--CCcEEEec-CCCCHHHHHHHHHHHCCC
Confidence            999999987652  56899987 467899999999999864

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.98  E-value=9.1e-31  Score=249.66  Aligned_cols=238  Identities=18%  Similarity=0.167  Sum_probs=173.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ++++|||||||||||++++++|+++|++|++++|+............ +  .        ...++++++.+|++|++.+.
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~--~--------~~~~~~~~~~~Dl~~~~~~~   71 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLA-L--D--------GAKERLHLFKANLLEEGSFD   71 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHh-c--c--------CCCCceEEEeccccCcchHH
Confidence            45789999999999999999999999999999998754322211110 0  0        01147899999999999999


Q ss_pred             HHhcCCCEEEEccccCccccCCCC-CcchhhHHHHHHHHHHHHHc-CCCEEEEEccCCCCCCC-C---------chhhhc
Q 016901          159 PALGNASVVICCIGASEKEVFDIT-GPYRIDFQATKNLVDAATIA-KVNHFIMVSSLGTNKFG-F---------PAAILN  226 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~~~~~~~~-~~~~~nv~g~~~ll~a~~~~-~v~r~V~~SS~~~~~~~-~---------~~~~~~  226 (380)
                      ++++++|+|||+|+.......++. ..+++|+.|+.+++++|.+. +++||||+||.++..++ .         +..+..
T Consensus        72 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~  151 (322)
T PLN02662         72 SVVDGCEGVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSD  151 (322)
T ss_pred             HHHcCCCEEEEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCC
Confidence            999999999999986543333332 56789999999999999887 88999999997532111 0         011111


Q ss_pred             h------hhHHHHHHHHHHHHHH----HCCCCEEEEecCcccCCCccccccc--c--eee-cc---CCcccCCCCCHHHH
Q 016901          227 L------FWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKETH--N--ITL-SQ---EDTLFGGQVSNLQV  288 (380)
Q Consensus       227 ~------~~~Y~~sK~~~E~~l~----~~g~~~~ivRpg~v~gp~~~~~~~~--~--~~~-~~---~~~~~~~~i~~~Dv  288 (380)
                      +      ...|+.+|..+|++++    +++++++++||+++|||........  .  ... ..   ......++||++|+
T Consensus       152 p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  231 (322)
T PLN02662        152 PAFCEESKLWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQTFPNASYRWVDVRDV  231 (322)
T ss_pred             hhHhhcccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCccCCCCCcCeEEHHHH
Confidence            2      2479999999998875    4799999999999999974321000  0  000 00   11123468999999


Q ss_pred             HHHHHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCCC
Q 016901          289 AELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQ  330 (380)
Q Consensus       289 A~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~  330 (380)
                      |++++.+++++..  ++.||++ +...++.|+++++.+..+.
T Consensus       232 a~a~~~~~~~~~~--~~~~~~~-g~~~s~~e~~~~i~~~~~~  270 (322)
T PLN02662        232 ANAHIQAFEIPSA--SGRYCLV-ERVVHYSEVVKILHELYPT  270 (322)
T ss_pred             HHHHHHHhcCcCc--CCcEEEe-CCCCCHHHHHHHHHHHCCC
Confidence            9999999987653  3578887 4678999999999998664

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.97  E-value=1.5e-30  Score=248.40  Aligned_cols=238  Identities=20%  Similarity=0.174  Sum_probs=176.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      .+++|||||||||||++++++|+++|++|++++|+.++.+.........           ....+++++.+|++|.+++.
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-----------~~~~~~~~~~~Dl~~~~~~~   72 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALD-----------GAKERLKLFKADLLEESSFE   72 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhcc-----------CCCCceEEEecCCCCcchHH
Confidence            4679999999999999999999999999999999876544332211100           01146899999999999999


Q ss_pred             HHhcCCCEEEEccccCccccCCCC-CcchhhHHHHHHHHHHHHHc-CCCEEEEEccCCCCCCCCc----------hhhh-
Q 016901          159 PALGNASVVICCIGASEKEVFDIT-GPYRIDFQATKNLVDAATIA-KVNHFIMVSSLGTNKFGFP----------AAIL-  225 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~~~~~~~~-~~~~~nv~g~~~ll~a~~~~-~v~r~V~~SS~~~~~~~~~----------~~~~-  225 (380)
                      ++++++|+|||+|+.......++. ..+++|+.|+.+++++|++. +++||||+||.++..++.+          ..+. 
T Consensus        73 ~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~  152 (322)
T PLN02986         73 QAIEGCDAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSD  152 (322)
T ss_pred             HHHhCCCEEEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCC
Confidence            999999999999986543322332 35789999999999999985 6899999999865322211          0111 


Q ss_pred             -----chhhHHHHHHHHHHHHHH----HCCCCEEEEecCcccCCCccccccc--c-e-e-eccC---CcccCCCCCHHHH
Q 016901          226 -----NLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKETH--N-I-T-LSQE---DTLFGGQVSNLQV  288 (380)
Q Consensus       226 -----~~~~~Y~~sK~~~E~~l~----~~g~~~~ivRpg~v~gp~~~~~~~~--~-~-~-~~~~---~~~~~~~i~~~Dv  288 (380)
                           .+.+.|+.+|..+|.+++    ++|++++++||+++|||........  . + . ....   ......+||++|+
T Consensus       153 p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~Dv  232 (322)
T PLN02986        153 PSLCRETKNWYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNLFNNRFYRFVDVRDV  232 (322)
T ss_pred             hHHhhccccchHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCCCCCcCcceeEHHHH
Confidence                 124679999999998775    4799999999999999964321000  0 0 0 0011   1122468999999


Q ss_pred             HHHHHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCCC
Q 016901          289 AELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQ  330 (380)
Q Consensus       289 A~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~  330 (380)
                      |++++.+++++..  ++.||++ +...++.++++++.+.++.
T Consensus       233 a~a~~~al~~~~~--~~~yni~-~~~~s~~e~~~~i~~~~~~  271 (322)
T PLN02986        233 ALAHIKALETPSA--NGRYIID-GPIMSVNDIIDILRELFPD  271 (322)
T ss_pred             HHHHHHHhcCccc--CCcEEEe-cCCCCHHHHHHHHHHHCCC
Confidence            9999999988653  4589995 5578999999999999874

>PLN02650 dihydroflavonol-4-reductase

Probab=99.97  E-value=1.9e-30  Score=250.75  Aligned_cols=238  Identities=19%  Similarity=0.204  Sum_probs=174.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ..++||||||+||||++++++|+++|++|++++|+.+....+......   .        ....+++++.+|++|.+.+.
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~---~--------~~~~~~~~v~~Dl~d~~~~~   72 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDL---P--------GATTRLTLWKADLAVEGSFD   72 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhc---c--------CCCCceEEEEecCCChhhHH
Confidence            457899999999999999999999999999999987665443321110   0        00136889999999999999


Q ss_pred             HHhcCCCEEEEccccCccccCCC-CCcchhhHHHHHHHHHHHHHcC-CCEEEEEccCCCCCCC---Cc---hh-------
Q 016901          159 PALGNASVVICCIGASEKEVFDI-TGPYRIDFQATKNLVDAATIAK-VNHFIMVSSLGTNKFG---FP---AA-------  223 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~~~~~~~-~~~~~~nv~g~~~ll~a~~~~~-v~r~V~~SS~~~~~~~---~~---~~-------  223 (380)
                      +++.++|+|||+|+.......++ ...+++|+.|+.+++++|.+.+ ++||||+||.+++...   .+   +.       
T Consensus        73 ~~~~~~d~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~  152 (351)
T PLN02650         73 DAIRGCTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDF  152 (351)
T ss_pred             HHHhCCCEEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhh
Confidence            99999999999998653322233 3568899999999999999877 7899999998553211   01   11       


Q ss_pred             ---hhchhhHHHHHHHHHHHHHH----HCCCCEEEEecCcccCCCcccccccce----e-e-ccC----CcccCCCCCHH
Q 016901          224 ---ILNLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKETHNI----T-L-SQE----DTLFGGQVSNL  286 (380)
Q Consensus       224 ---~~~~~~~Y~~sK~~~E~~l~----~~g~~~~ivRpg~v~gp~~~~~~~~~~----~-~-~~~----~~~~~~~i~~~  286 (380)
                         ...+.++|+.+|.++|.+++    ++|++++++||+++|||+........+    . . ...    .....+++|++
T Consensus       153 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~v~V~  232 (351)
T PLN02650        153 CRRKKMTGWMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEAHYSIIKQGQFVHLD  232 (351)
T ss_pred             hhccccccchHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCccccCcCCCcceeeHH
Confidence               01123579999999998875    479999999999999997432100000    0 0 000    01124789999


Q ss_pred             HHHHHHHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCCC
Q 016901          287 QVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQ  330 (380)
Q Consensus       287 DvA~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~  330 (380)
                      |+|++++.+++++..  ++.| ++++...++.++++++.+..+.
T Consensus       233 Dva~a~~~~l~~~~~--~~~~-i~~~~~~s~~el~~~i~~~~~~  273 (351)
T PLN02650        233 DLCNAHIFLFEHPAA--EGRY-ICSSHDATIHDLAKMLREKYPE  273 (351)
T ss_pred             HHHHHHHHHhcCcCc--CceE-EecCCCcCHHHHHHHHHHhCcc
Confidence            999999999987652  4477 6777888999999999998763

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.97  E-value=1.4e-30  Score=251.29  Aligned_cols=234  Identities=15%  Similarity=0.183  Sum_probs=176.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCC-ChhcH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLE-KRVQI  157 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~-G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~-d~~~~  157 (380)
                      +|+|||||||||||++|+++|+++ |++|++++|+..+...+..                  ..+++++.+|++ +.+.+
T Consensus         1 m~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~------------------~~~~~~~~~Dl~~~~~~~   62 (347)
T PRK11908          1 MKKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVN------------------HPRMHFFEGDITINKEWI   62 (347)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhcc------------------CCCeEEEeCCCCCCHHHH
Confidence            368999999999999999999987 6999999987654332210                  146899999998 67778


Q ss_pred             HHHhcCCCEEEEccccCcc--ccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCC-----chhh------
Q 016901          158 EPALGNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF-----PAAI------  224 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag~~~~--~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~-----~~~~------  224 (380)
                      .++++++|+|||+|+....  ...++...+++|+.++.+++++|++.+ ++|||+||..++....     ++..      
T Consensus        63 ~~~~~~~d~ViH~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~-~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~  141 (347)
T PRK11908         63 EYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCPDEEFDPEASPLVYGP  141 (347)
T ss_pred             HHHHcCCCEEEECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC-CeEEEEecceeeccCCCcCcCccccccccCc
Confidence            8889999999999985432  123455567899999999999999988 7999999987643211     1111      


Q ss_pred             -hchhhHHHHHHHHHHHHHH----HCCCCEEEEecCcccCCCcccc-------------------cccceeeccCCcccC
Q 016901          225 -LNLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYK-------------------ETHNITLSQEDTLFG  280 (380)
Q Consensus       225 -~~~~~~Y~~sK~~~E~~l~----~~g~~~~ivRpg~v~gp~~~~~-------------------~~~~~~~~~~~~~~~  280 (380)
                       .++.+.|+.+|.++|++++    +++++++++||+++|||+....                   ....+.+........
T Consensus       142 ~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r  221 (347)
T PRK11908        142 INKPRWIYACSKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKR  221 (347)
T ss_pred             CCCccchHHHHHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceee
Confidence             1345579999999998886    3799999999999999974210                   001111222223344


Q ss_pred             CCCCHHHHHHHHHHHHhCCCC-ccCcEEEEecC-CCCCcchHHHHHHhcCCCCC
Q 016901          281 GQVSNLQVAELLACMAKNRSL-SYCKVVEVIAE-TTAPLTPMEELLAKIPSQRA  332 (380)
Q Consensus       281 ~~i~~~DvA~~i~~~l~~~~~-~~~~~~ni~~~-~~~s~~~~~e~~~~~~~~~~  332 (380)
                      ++||++|+|++++.+++++.. ..+++||++++ ...|+.|+++.+.+..+..+
T Consensus       222 ~~i~v~D~a~a~~~~~~~~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~~~~  275 (347)
T PRK11908        222 AFTDIDDGIDALMKIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAAEYP  275 (347)
T ss_pred             ccccHHHHHHHHHHHHhCccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhcCcc
Confidence            689999999999999987531 34789999997 47899999999998888543

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.97  E-value=1.5e-30  Score=252.98  Aligned_cols=231  Identities=15%  Similarity=0.030  Sum_probs=176.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      .+|+|||||||||||+++++.|+++|++|++++|........                   ....++++.+|++|.+.+.
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~-------------------~~~~~~~~~~Dl~d~~~~~   80 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSE-------------------DMFCHEFHLVDLRVMENCL   80 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccccc-------------------ccccceEEECCCCCHHHHH
Confidence            568999999999999999999999999999999865321100                   0023578899999999899


Q ss_pred             HHhcCCCEEEEccccCcc---ccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCC--------c-h--hh
Q 016901          159 PALGNASVVICCIGASEK---EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF--------P-A--AI  224 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~~---~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~--------~-~--~~  224 (380)
                      +++.++|+|||+|+....   ...++...++.|+.++.+++++|++.++++|||+||..++....        . .  .+
T Consensus        81 ~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p  160 (370)
T PLN02695         81 KVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWP  160 (370)
T ss_pred             HHHhCCCEEEEcccccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCcccCCC
Confidence            889999999999985431   11233344678999999999999999999999999987654211        0 1  13


Q ss_pred             hchhhHHHHHHHHHHHHHH----HCCCCEEEEecCcccCCCccccc----------------ccceeeccCCcccCCCCC
Q 016901          225 LNLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKE----------------THNITLSQEDTLFGGQVS  284 (380)
Q Consensus       225 ~~~~~~Y~~sK~~~E~~l~----~~g~~~~ivRpg~v~gp~~~~~~----------------~~~~~~~~~~~~~~~~i~  284 (380)
                      ..+.+.|+.+|..+|++++    +.|++++++||+++|||++.+..                ...+.+........+++|
T Consensus       161 ~~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~  240 (370)
T PLN02695        161 AEPQDAYGLEKLATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTF  240 (370)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEe
Confidence            4566789999999998875    37999999999999999753311                011112222223346899


Q ss_pred             HHHHHHHHHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCCCC
Q 016901          285 NLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (380)
Q Consensus       285 ~~DvA~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~  331 (380)
                      ++|++++++.++.+..   +++||+++++..|+.++++.+.+..+..
T Consensus       241 v~D~a~ai~~~~~~~~---~~~~nv~~~~~~s~~el~~~i~~~~g~~  284 (370)
T PLN02695        241 IDECVEGVLRLTKSDF---REPVNIGSDEMVSMNEMAEIALSFENKK  284 (370)
T ss_pred             HHHHHHHHHHHHhccC---CCceEecCCCceeHHHHHHHHHHHhCCC
Confidence            9999999999887643   6899999999999999999999988753

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.97  E-value=1.9e-30  Score=232.85  Aligned_cols=233  Identities=13%  Similarity=0.073  Sum_probs=187.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeC-----CchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCC
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLG--FRVRAGVR-----SVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK  153 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G--~~V~~l~R-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d  153 (380)
                      |++|||||+||||+.++++++++.  .+|++++.     +.+.+..+                  +..+++.|+++|+.|
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~------------------~~~~~~~fv~~DI~D   62 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADV------------------EDSPRYRFVQGDICD   62 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhh------------------hcCCCceEEeccccC
Confidence            579999999999999999999986  45677665     22222221                  123799999999999


Q ss_pred             hhcHHHHhc--CCCEEEEccccC--ccccCCCCCcchhhHHHHHHHHHHHHHcCCC-EEEEEccCCCCCC-------CCc
Q 016901          154 RVQIEPALG--NASVVICCIGAS--EKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVSSLGTNKF-------GFP  221 (380)
Q Consensus       154 ~~~~~~a~~--~~d~Vi~~Ag~~--~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~-r~V~~SS~~~~~~-------~~~  221 (380)
                      .+.+.+++.  .+|+|+|.|+-.  +.+..++...+++|+.||.+|++++++...+ ||+|+||--++..       ..+
T Consensus        63 ~~~v~~~~~~~~~D~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE  142 (340)
T COG1088          63 RELVDRLFKEYQPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTE  142 (340)
T ss_pred             HHHHHHHHHhcCCCeEEEechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCccc
Confidence            999999997  599999999854  4445567777999999999999999998864 9999999655321       224


Q ss_pred             hhhhchhhHHHHHHHHHHHHHHH----CCCCEEEEecCcccCCCccccc-----------ccceeeccCCcccCCCCCHH
Q 016901          222 AAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE-----------THNITLSQEDTLFGGQVSNL  286 (380)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~~----~g~~~~ivRpg~v~gp~~~~~~-----------~~~~~~~~~~~~~~~~i~~~  286 (380)
                      ..+.+|.++|.+||+.++.++++    +|++++|.|+.+-|||.+....           ...+++-+.+....+|++++
T Consensus       143 ~tp~~PsSPYSASKAasD~lVray~~TYglp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iRDWl~Ve  222 (340)
T COG1088         143 TTPYNPSSPYSASKAASDLLVRAYVRTYGLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIRDWLYVE  222 (340)
T ss_pred             CCCCCCCCCcchhhhhHHHHHHHHHHHcCCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcceeeeEEeH
Confidence            56788899999999999988874    8999999999999999875421           12223334444556899999


Q ss_pred             HHHHHHHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCCCCCC
Q 016901          287 QVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE  333 (380)
Q Consensus       287 DvA~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~~~  333 (380)
                      |-++++..++.+...  |++|||+++...+..++++.+.+++++...
T Consensus       223 Dh~~ai~~Vl~kg~~--GE~YNIgg~~E~~Nlevv~~i~~~l~~~~~  267 (340)
T COG1088         223 DHCRAIDLVLTKGKI--GETYNIGGGNERTNLEVVKTICELLGKDKP  267 (340)
T ss_pred             hHHHHHHHHHhcCcC--CceEEeCCCccchHHHHHHHHHHHhCcccc
Confidence            999999999999886  999999999999999999999999997554

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.97  E-value=6.1e-30  Score=253.58  Aligned_cols=245  Identities=16%  Similarity=0.088  Sum_probs=173.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhH-------HHH------HHHHHhhhhcccccccCCCCCCc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRA-------ENL------VQSVKQMKLDGELANKGIQPVEM  143 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~-------~~~------~~~~~~~~~~~~~~~~~~~~~~~  143 (380)
                      ..++|+||||||+||||++|+++|+++|++|++++|.....       ...      .+.++.+..         ....+
T Consensus        44 ~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---------~~~~~  114 (442)
T PLN02572         44 SSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKE---------VSGKE  114 (442)
T ss_pred             cccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHH---------hhCCc
Confidence            45778999999999999999999999999999987532110       000      000110000         00146


Q ss_pred             eEEEEcCCCChhcHHHHhc--CCCEEEEccccCccc--cCCC---CCcchhhHHHHHHHHHHHHHcCCC-EEEEEccCCC
Q 016901          144 LELVECDLEKRVQIEPALG--NASVVICCIGASEKE--VFDI---TGPYRIDFQATKNLVDAATIAKVN-HFIMVSSLGT  215 (380)
Q Consensus       144 v~~~~~Dl~d~~~~~~a~~--~~d~Vi~~Ag~~~~~--~~~~---~~~~~~nv~g~~~ll~a~~~~~v~-r~V~~SS~~~  215 (380)
                      ++++.+|++|.+.+.++++  ++|+|||+|+.....  ..++   ...+++|+.|+.+++++|++.+++ +|||+||..+
T Consensus       115 v~~v~~Dl~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~v  194 (442)
T PLN02572        115 IELYVGDICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGE  194 (442)
T ss_pred             ceEEECCCCCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeccee
Confidence            8999999999999999997  489999999753221  1111   233678999999999999999985 9999999877


Q ss_pred             CCCCC---c------------h---hhhchhhHHHHHHHHHHHHHH----HCCCCEEEEecCcccCCCccccc-------
Q 016901          216 NKFGF---P------------A---AILNLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKE-------  266 (380)
Q Consensus       216 ~~~~~---~------------~---~~~~~~~~Y~~sK~~~E~~l~----~~g~~~~ivRpg~v~gp~~~~~~-------  266 (380)
                      +....   +            +   .+..+.+.|+.+|.++|.+++    .+|++++++||+++|||++....       
T Consensus       195 YG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~  274 (442)
T PLN02572        195 YGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELIN  274 (442)
T ss_pred             cCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCccccccccccc
Confidence            53210   0            0   133456789999999998875    36999999999999999753210       


Q ss_pred             ---------------------ccceeeccCCcccCCCCCHHHHHHHHHHHHhCCCCcc-CcEEEEecCCCCCcchHHHHH
Q 016901          267 ---------------------THNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSY-CKVVEVIAETTAPLTPMEELL  324 (380)
Q Consensus       267 ---------------------~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~~~~~-~~~~ni~~~~~~s~~~~~e~~  324 (380)
                                           ...+.+........+++|++|+|++++.++++....+ .++||+++ ...++.|+++++
T Consensus       275 ~~~~~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nigs-~~~si~el~~~i  353 (442)
T PLN02572        275 RLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPAKPGEFRVFNQFT-EQFSVNELAKLV  353 (442)
T ss_pred             ccCcccchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChhhcCceeEEEeCC-CceeHHHHHHHH
Confidence                                 0111122222334478999999999999998653111 26899976 568999999999


Q ss_pred             Hhc---CCCC
Q 016901          325 AKI---PSQR  331 (380)
Q Consensus       325 ~~~---~~~~  331 (380)
                      .++   .|..
T Consensus       354 ~~~~~~~g~~  363 (442)
T PLN02572        354 TKAGEKLGLD  363 (442)
T ss_pred             HHHHHhhCCC
Confidence            998   6643

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.97  E-value=1.3e-29  Score=242.25  Aligned_cols=238  Identities=18%  Similarity=0.131  Sum_probs=174.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      .+|+||||||+||||++++++|+++|++|++++|+..............           ....+++++.+|++|.+++.
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~-----------~~~~~~~~~~~D~~d~~~~~   72 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALD-----------GAKERLKLFKADLLDEGSFE   72 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhcc-----------CCCCceEEEeCCCCCchHHH
Confidence            4689999999999999999999999999999999876543322111100           01146889999999999999


Q ss_pred             HHhcCCCEEEEccccCccc--cCCCCCcchhhHHHHHHHHHHHHHc-CCCEEEEEccCCCCCCC----------Cchhhh
Q 016901          159 PALGNASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIA-KVNHFIMVSSLGTNKFG----------FPAAIL  225 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~~~--~~~~~~~~~~nv~g~~~ll~a~~~~-~v~r~V~~SS~~~~~~~----------~~~~~~  225 (380)
                      ++++++|+||||||.....  ..++...+++|+.|+.+++++|.+. ++++||++||.+++...          .+..+.
T Consensus        73 ~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~  152 (325)
T PLN02989         73 LAIDGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFT  152 (325)
T ss_pred             HHHcCCCEEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCC
Confidence            9999999999999864321  1223445789999999999999875 57899999997553211          111122


Q ss_pred             ch------hhHHHHHHHHHHHHHH----HCCCCEEEEecCcccCCCccccccc--ce--eeccCC----cccCCCCCHHH
Q 016901          226 NL------FWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKETH--NI--TLSQED----TLFGGQVSNLQ  287 (380)
Q Consensus       226 ~~------~~~Y~~sK~~~E~~l~----~~g~~~~ivRpg~v~gp~~~~~~~~--~~--~~~~~~----~~~~~~i~~~D  287 (380)
                      ++      .+.|+.+|..+|++++    ++|++++++||+++|||+.......  ..  .+..+.    ....+++|++|
T Consensus       153 ~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~~~~~r~~i~v~D  232 (325)
T PLN02989        153 NPSFAEERKQWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPFNTTHHRFVDVRD  232 (325)
T ss_pred             chhHhcccccchHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCCCCcCcCeeEHHH
Confidence            22      3569999999998876    3699999999999999975421100  00  000111    11246899999


Q ss_pred             HHHHHHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCCC
Q 016901          288 VAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQ  330 (380)
Q Consensus       288 vA~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~  330 (380)
                      +|++++.+++++..  ++.||++ +...++.++++++.++++.
T Consensus       233 va~a~~~~l~~~~~--~~~~ni~-~~~~s~~ei~~~i~~~~~~  272 (325)
T PLN02989        233 VALAHVKALETPSA--NGRYIID-GPVVTIKDIENVLREFFPD  272 (325)
T ss_pred             HHHHHHHHhcCccc--CceEEEe-cCCCCHHHHHHHHHHHCCC
Confidence            99999999987652  5689995 5578999999999999864

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.97  E-value=2.6e-29  Score=241.49  Aligned_cols=239  Identities=18%  Similarity=0.208  Sum_probs=172.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .+.+++||||||+||||++|+++|+++|++|++++|+.+....... +..+           ...++++++.+|++|.++
T Consensus         6 ~~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~-----------~~~~~~~~~~~Dl~d~~~   73 (338)
T PLN00198          6 PTGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAH-LRAL-----------QELGDLKIFGADLTDEES   73 (338)
T ss_pred             CCCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH-HHhc-----------CCCCceEEEEcCCCChHH
Confidence            3467899999999999999999999999999999998654332211 0000           011368899999999999


Q ss_pred             HHHHhcCCCEEEEccccCccccCCCC-CcchhhHHHHHHHHHHHHHc-CCCEEEEEccCCCCCCC------Cc--h----
Q 016901          157 IEPALGNASVVICCIGASEKEVFDIT-GPYRIDFQATKNLVDAATIA-KVNHFIMVSSLGTNKFG------FP--A----  222 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag~~~~~~~~~~-~~~~~nv~g~~~ll~a~~~~-~v~r~V~~SS~~~~~~~------~~--~----  222 (380)
                      +.++++++|+|||+|+.......++. ..+++|+.|+.++++++.+. ++++|||+||..++...      .+  +    
T Consensus        74 ~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~  153 (338)
T PLN00198         74 FEAPIAGCDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWT  153 (338)
T ss_pred             HHHHHhcCCEEEEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCC
Confidence            99999999999999986432222222 34688999999999999876 58899999998664311      00  0    


Q ss_pred             ------hhhchhhHHHHHHHHHHHHHH----HCCCCEEEEecCcccCCCccccccc------------ceeecc-CCcc-
Q 016901          223 ------AILNLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKETH------------NITLSQ-EDTL-  278 (380)
Q Consensus       223 ------~~~~~~~~Y~~sK~~~E~~l~----~~g~~~~ivRpg~v~gp~~~~~~~~------------~~~~~~-~~~~-  278 (380)
                            ....+.++|+.+|.++|.+++    ++|++++++||+++|||+.......            .+.+.. .... 
T Consensus       154 ~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  233 (338)
T PLN00198        154 DVEFLTSEKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGLKGMQM  233 (338)
T ss_pred             chhhhhhcCCccchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCcccccccccccc
Confidence                  112356679999999998876    3699999999999999974211000            011110 1111 


Q ss_pred             ---cCCCCCHHHHHHHHHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCCC
Q 016901          279 ---FGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQ  330 (380)
Q Consensus       279 ---~~~~i~~~DvA~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~  330 (380)
                         ..+++|++|+|++++.+++.+..  ++.| ++++...++.++++.+.+..+.
T Consensus       234 ~~~~~~~i~V~D~a~a~~~~~~~~~~--~~~~-~~~~~~~s~~el~~~i~~~~~~  285 (338)
T PLN00198        234 LSGSISITHVEDVCRAHIFLAEKESA--SGRY-ICCAANTSVPELAKFLIKRYPQ  285 (338)
T ss_pred             ccCCcceeEHHHHHHHHHHHhhCcCc--CCcE-EEecCCCCHHHHHHHHHHHCCC
Confidence               13789999999999999987542  3467 5666778899999999887754

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.97  E-value=1.7e-29  Score=244.40  Aligned_cols=237  Identities=14%  Similarity=0.102  Sum_probs=174.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      +++|||||||||||+++++.|+++|++|+++.++......... +..           .....+++++.+|++|.+++.+
T Consensus         1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~-~~~-----------~~~~~~~~~~~~Dl~d~~~~~~   68 (355)
T PRK10217          1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMS-LAP-----------VAQSERFAFEKVDICDRAELAR   68 (355)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhh-hhh-----------cccCCceEEEECCCcChHHHHH
Confidence            3689999999999999999999999886654443221111110 000           0011468889999999999999


Q ss_pred             HhcC--CCEEEEccccCccc--cCCCCCcchhhHHHHHHHHHHHHH---------cCCCEEEEEccCCCCCCC-------
Q 016901          160 ALGN--ASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATI---------AKVNHFIMVSSLGTNKFG-------  219 (380)
Q Consensus       160 a~~~--~d~Vi~~Ag~~~~~--~~~~~~~~~~nv~g~~~ll~a~~~---------~~v~r~V~~SS~~~~~~~-------  219 (380)
                      ++++  +|+||||||.....  ..++...+++|+.|+.+++++|.+         .++++||++||.+++...       
T Consensus        69 ~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~  148 (355)
T PRK10217         69 VFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFF  148 (355)
T ss_pred             HHhhcCCCEEEECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCc
Confidence            9974  99999999865322  224456688999999999999986         356799999997764321       


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHH----HCCCCEEEEecCcccCCCccccc-----------ccceeeccCCcccCCCCC
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKE-----------THNITLSQEDTLFGGQVS  284 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~----~~g~~~~ivRpg~v~gp~~~~~~-----------~~~~~~~~~~~~~~~~i~  284 (380)
                      .+..+..+.+.|+.+|.++|.+++    +.+++++++||+++|||++....           ...+.+........+++|
T Consensus       149 ~E~~~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~  228 (355)
T PRK10217        149 TETTPYAPSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLY  228 (355)
T ss_pred             CCCCCCCCCChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCeeeCcCc
Confidence            112233456789999999998875    47999999999999999863210           111122222333457899


Q ss_pred             HHHHHHHHHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCCC
Q 016901          285 NLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQ  330 (380)
Q Consensus       285 ~~DvA~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~  330 (380)
                      ++|+|++++.+++...  .+++||+++++..++.++++.+.+..+.
T Consensus       229 v~D~a~a~~~~~~~~~--~~~~yni~~~~~~s~~~~~~~i~~~~~~  272 (355)
T PRK10217        229 VEDHARALYCVATTGK--VGETYNIGGHNERKNLDVVETICELLEE  272 (355)
T ss_pred             HHHHHHHHHHHHhcCC--CCCeEEeCCCCcccHHHHHHHHHHHhcc
Confidence            9999999999998744  3789999999999999999999998875

>PLN02583 cinnamoyl-CoA reductase

Probab=99.97  E-value=4.6e-29  Score=235.60  Aligned_cols=242  Identities=16%  Similarity=0.144  Sum_probs=174.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      .+++|||||||||||++++++|+++|++|++++|+.++... ...+..+.          ....+++++.+|++|.+++.
T Consensus         5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~-~~~~~~l~----------~~~~~~~~~~~Dl~d~~~~~   73 (297)
T PLN02583          5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEI-EKEIRGLS----------CEEERLKVFDVDPLDYHSIL   73 (297)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhH-HHHHHhcc----------cCCCceEEEEecCCCHHHHH
Confidence            45789999999999999999999999999999996433211 11111110          00146889999999999999


Q ss_pred             HHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHc-CCCEEEEEccCCCCCCC----------Cchhhhch
Q 016901          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA-KVNHFIMVSSLGTNKFG----------FPAAILNL  227 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~-~v~r~V~~SS~~~~~~~----------~~~~~~~~  227 (380)
                      +++.++|.|+|+++.......+....+++|+.|+.+++++|.+. +++|||++||.++..++          ++..+..+
T Consensus        74 ~~l~~~d~v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~  153 (297)
T PLN02583         74 DALKGCSGLFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQ  153 (297)
T ss_pred             HHHcCCCEEEEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCH
Confidence            99999999999876543222233456899999999999999886 58999999997553211          01111111


Q ss_pred             h------hHHHHHHHHHHHHHH----HCCCCEEEEecCcccCCCccccc---ccceeeccCCcccCCCCCHHHHHHHHHH
Q 016901          228 F------WGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKE---THNITLSQEDTLFGGQVSNLQVAELLAC  294 (380)
Q Consensus       228 ~------~~Y~~sK~~~E~~l~----~~g~~~~ivRpg~v~gp~~~~~~---~~~~~~~~~~~~~~~~i~~~DvA~~i~~  294 (380)
                      .      ..|+.+|..+|++++    +.|+++++|||++||||+.....   ........ .. ...+||++|+|++++.
T Consensus       154 ~~~~~~~~~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~~~~~~~~~~~~-~~-~~~~v~V~Dva~a~~~  231 (297)
T PLN02583        154 NFCRKFKLWHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHNPYLKGAAQMYE-NG-VLVTVDVNFLVDAHIR  231 (297)
T ss_pred             HHHhhcccHHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCchhhhcCCcccCc-cc-CcceEEHHHHHHHHHH
Confidence            1      159999999999885    46999999999999999753211   00000001 11 1258999999999999


Q ss_pred             HHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCCCCCCCc
Q 016901          295 MAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPK  335 (380)
Q Consensus       295 ~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~~~~~  335 (380)
                      +++++. . ++.|.++++......++.+++.+.+...+.++
T Consensus       232 al~~~~-~-~~r~~~~~~~~~~~~~~~~~~~~~~p~~~~~~  270 (297)
T PLN02583        232 AFEDVS-S-YGRYLCFNHIVNTEEDAVKLAQMLSPLIPSPP  270 (297)
T ss_pred             HhcCcc-c-CCcEEEecCCCccHHHHHHHHHHhCCCCCCCC
Confidence            999765 3 44688887776556789999999887765554

>PLN02686 cinnamoyl-CoA reductase

Probab=99.97  E-value=4.9e-29  Score=242.04  Aligned_cols=244  Identities=17%  Similarity=0.162  Sum_probs=175.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ..++|+||||||+||||++++++|+++|++|++++|+.+....+.. +..++-.      + ....+++++.+|++|.++
T Consensus        50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~-l~~~~~~------~-~~~~~~~~v~~Dl~d~~~  121 (367)
T PLN02686         50 DAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLRE-MEMFGEM------G-RSNDGIWTVMANLTEPES  121 (367)
T ss_pred             CCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-Hhhhccc------c-ccCCceEEEEcCCCCHHH
Confidence            3467899999999999999999999999999999998765444321 1110000      0 001358899999999999


Q ss_pred             HHHHhcCCCEEEEccccCccccC--CCCCcchhhHHHHHHHHHHHHHc-CCCEEEEEccCC--CCCC--C-C-c------
Q 016901          157 IEPALGNASVVICCIGASEKEVF--DITGPYRIDFQATKNLVDAATIA-KVNHFIMVSSLG--TNKF--G-F-P------  221 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag~~~~~~~--~~~~~~~~nv~g~~~ll~a~~~~-~v~r~V~~SS~~--~~~~--~-~-~------  221 (380)
                      +.+++.++|+|||+|+.......  ......++|+.++.+++++|++. +++||||+||..  ++..  . . +      
T Consensus       122 l~~~i~~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~  201 (367)
T PLN02686        122 LHEAFDGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEE  201 (367)
T ss_pred             HHHHHHhccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCC
Confidence            99999999999999986532211  11344678999999999999986 799999999963  2210  0 0 0      


Q ss_pred             -----hhhhchhhHHHHHHHHHHHHHH----HCCCCEEEEecCcccCCCcccccc--------cceeeccCCcccCCCCC
Q 016901          222 -----AAILNLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKET--------HNITLSQEDTLFGGQVS  284 (380)
Q Consensus       222 -----~~~~~~~~~Y~~sK~~~E~~l~----~~g~~~~ivRpg~v~gp~~~~~~~--------~~~~~~~~~~~~~~~i~  284 (380)
                           ..+..+.+.|+.+|..+|++++    ++|+++++|||+++|||+......        ....+....  ...++|
T Consensus       202 ~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~~~~~~~~~g~~~~~g~g--~~~~v~  279 (367)
T PLN02686        202 SWSDESFCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNSTATIAYLKGAQEMLADG--LLATAD  279 (367)
T ss_pred             CCCChhhcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCChhHHHHhcCCCccCCCC--CcCeEE
Confidence                 0112244579999999999875    369999999999999997421100        001111111  124899


Q ss_pred             HHHHHHHHHHHHhCC-CCccCcEEEEecCCCCCcchHHHHHHhcCCCC
Q 016901          285 NLQVAELLACMAKNR-SLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (380)
Q Consensus       285 ~~DvA~~i~~~l~~~-~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~  331 (380)
                      ++|+|++++.+++.. ....+++| +++++..++.|+++.+.++++..
T Consensus       280 V~Dva~A~~~al~~~~~~~~~~~y-i~~g~~~s~~e~~~~i~~~~g~~  326 (367)
T PLN02686        280 VERLAEAHVCVYEAMGNKTAFGRY-ICFDHVVSREDEAEELARQIGLP  326 (367)
T ss_pred             HHHHHHHHHHHHhccCCCCCCCcE-EEeCCCccHHHHHHHHHHHcCCC
Confidence            999999999999853 11236678 89999999999999999998754

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.97  E-value=4.1e-29  Score=241.24  Aligned_cols=237  Identities=15%  Similarity=0.066  Sum_probs=175.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ++|+||||||+||||+++++.|+++|++|++++|+..........+..              ..+++++.+|++|.+++.
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~--------------~~~~~~~~~Dl~~~~~~~   68 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNL--------------AKKIEDHFGDIRDAAKLR   68 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhh--------------cCCceEEEccCCCHHHHH
Confidence            468999999999999999999999999999999987654333221110              145778999999999999


Q ss_pred             HHhcC--CCEEEEccccCcc--ccCCCCCcchhhHHHHHHHHHHHHHcC-CCEEEEEccCCCCCCC------Cchhhhch
Q 016901          159 PALGN--ASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAK-VNHFIMVSSLGTNKFG------FPAAILNL  227 (380)
Q Consensus       159 ~a~~~--~d~Vi~~Ag~~~~--~~~~~~~~~~~nv~g~~~ll~a~~~~~-v~r~V~~SS~~~~~~~------~~~~~~~~  227 (380)
                      ++++.  +|+|||+||....  ...++...+++|+.++.+++++|++.+ +++||++||..++...      .+..+..+
T Consensus        69 ~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p  148 (349)
T TIGR02622        69 KAIAEFKPEIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRETDPLGG  148 (349)
T ss_pred             HHHhhcCCCEEEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccCCCCCC
Confidence            99875  6999999985422  222344558899999999999998877 7899999997664321      11223455


Q ss_pred             hhHHHHHHHHHHHHHHH-----------CCCCEEEEecCcccCCCcccc------------cccceeeccCCcccCCCCC
Q 016901          228 FWGVLLWKRKAEEALIA-----------SGLPYTIVRPGGMERPTDAYK------------ETHNITLSQEDTLFGGQVS  284 (380)
Q Consensus       228 ~~~Y~~sK~~~E~~l~~-----------~g~~~~ivRpg~v~gp~~~~~------------~~~~~~~~~~~~~~~~~i~  284 (380)
                      .+.|+.+|.++|.+++.           .|++++++||+++|||++...            ....+.+. ......+++|
T Consensus       149 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~-~g~~~rd~i~  227 (349)
T TIGR02622       149 HDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVIIR-NPDATRPWQH  227 (349)
T ss_pred             CCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEEC-CCCcccceee
Confidence            67899999999988863           289999999999999974211            11122222 2334457899


Q ss_pred             HHHHHHHHHHHHhCC---CCccCcEEEEecC--CCCCcchHHHHHHhcCCC
Q 016901          285 NLQVAELLACMAKNR---SLSYCKVVEVIAE--TTAPLTPMEELLAKIPSQ  330 (380)
Q Consensus       285 ~~DvA~~i~~~l~~~---~~~~~~~~ni~~~--~~~s~~~~~e~~~~~~~~  330 (380)
                      ++|+|++++.+++..   ....+++|||+++  ...++.++++.+.+..+.
T Consensus       228 v~D~a~a~~~~~~~~~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~~  278 (349)
T TIGR02622       228 VLEPLSGYLLLAEKLFTGQAEFAGAWNFGPRASDNARVVELVVDALEFWWG  278 (349)
T ss_pred             HHHHHHHHHHHHHHHhhcCccccceeeeCCCcccCcCHHHHHHHHHHHhcC
Confidence            999999999888642   1122579999985  678899999988776553

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.97  E-value=1.9e-29  Score=249.21  Aligned_cols=230  Identities=15%  Similarity=0.092  Sum_probs=170.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHH-HHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAE-NLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      ..|+|||||||||||++|+++|+++|++|++++|...... .... +              ....+++++.+|+.+.   
T Consensus       119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~-~--------------~~~~~~~~~~~Di~~~---  180 (436)
T PLN02166        119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVH-L--------------FGNPRFELIRHDVVEP---  180 (436)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhh-h--------------ccCCceEEEECccccc---
Confidence            5578999999999999999999999999999998643211 1110 0              0114688889998764   


Q ss_pred             HHHhcCCCEEEEccccCccc--cCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCC-----Cch-----hhh
Q 016901          158 EPALGNASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPA-----AIL  225 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag~~~~~--~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~-----~~~-----~~~  225 (380)
                        .+.++|+|||+|+.....  ..++...+++|+.|+.+++++|++.++ +|||+||..++...     .+.     .+.
T Consensus       181 --~~~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~  257 (436)
T PLN02166        181 --ILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLEHPQKETYWGNVNPI  257 (436)
T ss_pred             --cccCCCEEEECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECcHHHhCCCCCCCCCccccccCCCC
Confidence              346799999999854321  123445578999999999999999886 89999998764321     011     123


Q ss_pred             chhhHHHHHHHHHHHHHHH----CCCCEEEEecCcccCCCccccc-------------ccceeeccCCcccCCCCCHHHH
Q 016901          226 NLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE-------------THNITLSQEDTLFGGQVSNLQV  288 (380)
Q Consensus       226 ~~~~~Y~~sK~~~E~~l~~----~g~~~~ivRpg~v~gp~~~~~~-------------~~~~~~~~~~~~~~~~i~~~Dv  288 (380)
                      .+.+.|+.+|..+|++++.    .+++++++||+++|||++....             ...+.+........+++|++|+
T Consensus       258 ~p~s~Yg~SK~~aE~~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dv  337 (436)
T PLN02166        258 GERSCYDEGKRTAETLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDL  337 (436)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHH
Confidence            3456799999999998763    6899999999999999742110             1111222223334468999999


Q ss_pred             HHHHHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCCCCC
Q 016901          289 AELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (380)
Q Consensus       289 A~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~~  332 (380)
                      +++++.++++..   .++||+++++..|+.|+++.+.++.+...
T Consensus       338 a~ai~~~~~~~~---~giyNIgs~~~~Si~ela~~I~~~~g~~~  378 (436)
T PLN02166        338 VDGLVALMEGEH---VGPFNLGNPGEFTMLELAEVVKETIDSSA  378 (436)
T ss_pred             HHHHHHHHhcCC---CceEEeCCCCcEeHHHHHHHHHHHhCCCC
Confidence            999999997643   56999999999999999999999988543

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.97  E-value=3.1e-29  Score=241.52  Aligned_cols=239  Identities=13%  Similarity=-0.002  Sum_probs=175.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhH--HHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRA--ENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      |+||||||+||||++|+++|+++|++|++++|+.+..  ..+.......         ......+++++.+|++|.+.+.
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~Dl~d~~~l~   71 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDP---------HNVNKARMKLHYGDLTDSSNLR   71 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhcc---------ccccccceeEEEeccCCHHHHH
Confidence            5799999999999999999999999999999986421  1111100000         0000146899999999999999


Q ss_pred             HHhcC--CCEEEEccccCccc--cCCCCCcchhhHHHHHHHHHHHHHcCCC---EEEEEccCCCCCCC-----Cchhhhc
Q 016901          159 PALGN--ASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVN---HFIMVSSLGTNKFG-----FPAAILN  226 (380)
Q Consensus       159 ~a~~~--~d~Vi~~Ag~~~~~--~~~~~~~~~~nv~g~~~ll~a~~~~~v~---r~V~~SS~~~~~~~-----~~~~~~~  226 (380)
                      +++++  +|+|||+|+.....  ..+....+++|+.|+.+++++|++.+++   +|||+||..++...     .+..+..
T Consensus        72 ~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~  151 (343)
T TIGR01472        72 RIIDEIKPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNETTPFY  151 (343)
T ss_pred             HHHHhCCCCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCCCCCC
Confidence            99984  69999999865322  1122334678999999999999988763   89999998664321     1223445


Q ss_pred             hhhHHHHHHHHHHHHHH----HCCCCEEEEecCcccCCCcccc--c-----------cc--ceeeccCCcccCCCCCHHH
Q 016901          227 LFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYK--E-----------TH--NITLSQEDTLFGGQVSNLQ  287 (380)
Q Consensus       227 ~~~~Y~~sK~~~E~~l~----~~g~~~~ivRpg~v~gp~~~~~--~-----------~~--~~~~~~~~~~~~~~i~~~D  287 (380)
                      +.+.|+.||.++|.+++    +.|+++++.|+.++|||+....  .           ..  ............+++|++|
T Consensus       152 p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D  231 (343)
T TIGR01472       152 PRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKD  231 (343)
T ss_pred             CCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCceeHHH
Confidence            67789999999998885    3689999999999999853210  0           00  0111122233457899999


Q ss_pred             HHHHHHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCCCC
Q 016901          288 VAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (380)
Q Consensus       288 vA~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~  331 (380)
                      +|++++.+++++.   +++|||++++..|+.|+++.+.++.+..
T Consensus       232 ~a~a~~~~~~~~~---~~~yni~~g~~~s~~e~~~~i~~~~g~~  272 (343)
T TIGR01472       232 YVEAMWLMLQQDK---PDDYVIATGETHSVREFVEVSFEYIGKT  272 (343)
T ss_pred             HHHHHHHHHhcCC---CccEEecCCCceeHHHHHHHHHHHcCCC
Confidence            9999999998754   4689999999999999999999998853

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.97  E-value=6e-29  Score=237.59  Aligned_cols=223  Identities=14%  Similarity=0.149  Sum_probs=171.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G--~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ++|+||||||+||||++++++|+++|  ++|++++|+..+...+...+.               ..+++++.+|++|.+.
T Consensus         3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~---------------~~~~~~v~~Dl~d~~~   67 (324)
T TIGR03589         3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFP---------------APCLRFFIGDVRDKER   67 (324)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhC---------------CCcEEEEEccCCCHHH
Confidence            56899999999999999999999986  789999998665433322110               1468899999999999


Q ss_pred             HHHHhcCCCEEEEccccCccc--cCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCCchhhhchhhHHHHH
Q 016901          157 IEPALGNASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLW  234 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag~~~~~--~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~~Y~~s  234 (380)
                      +.++++++|+||||||.....  ..++...+++|+.|+.+++++|.+.++++||++||....         .+.+.|+.+
T Consensus        68 l~~~~~~iD~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~~---------~p~~~Y~~s  138 (324)
T TIGR03589        68 LTRALRGVDYVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKAA---------NPINLYGAT  138 (324)
T ss_pred             HHHHHhcCCEEEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCCC---------CCCCHHHHH
Confidence            999999999999999864321  223345688999999999999999999999999996532         234579999


Q ss_pred             HHHHHHHHH-------HCCCCEEEEecCcccCCCccccc-------cc--ceeeccCCcccCCCCCHHHHHHHHHHHHhC
Q 016901          235 KRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE-------TH--NITLSQEDTLFGGQVSNLQVAELLACMAKN  298 (380)
Q Consensus       235 K~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~-------~~--~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~  298 (380)
                      |+++|.+++       ..|++++++|||++|||++....       ..  .+.+. .......|+|++|++++++.+++.
T Consensus       139 K~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~~~i~~~~~~~~~~~~~~~i~-~~~~~r~~i~v~D~a~a~~~al~~  217 (324)
T TIGR03589       139 KLASDKLFVAANNISGSKGTRFSVVRYGNVVGSRGSVVPFFKSLKEEGVTELPIT-DPRMTRFWITLEQGVNFVLKSLER  217 (324)
T ss_pred             HHHHHHHHHHHHhhccccCcEEEEEeecceeCCCCCcHHHHHHHHHhCCCCeeeC-CCCceEeeEEHHHHHHHHHHHHhh
Confidence            999998874       26899999999999999653211       01  12222 122334689999999999999987


Q ss_pred             CCCccCcEEEEecCCCCCcchHHHHHHhcCC
Q 016901          299 RSLSYCKVVEVIAETTAPLTPMEELLAKIPS  329 (380)
Q Consensus       299 ~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~  329 (380)
                      ..  .+++| ++++...++.++++.+.+...
T Consensus       218 ~~--~~~~~-~~~~~~~sv~el~~~i~~~~~  245 (324)
T TIGR03589       218 ML--GGEIF-VPKIPSMKITDLAEAMAPECP  245 (324)
T ss_pred             CC--CCCEE-ccCCCcEEHHHHHHHHHhhCC
Confidence            43  36777 566667889999999988654

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.96  E-value=1.8e-28  Score=237.05  Aligned_cols=235  Identities=19%  Similarity=0.175  Sum_probs=170.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      .+|+||||||+||||++++++|+++|++|++++|+..+.......+.              ...+++++.+|++|.+.+.
T Consensus         9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~--------------~~~~~~~~~~Dl~~~~~~~   74 (353)
T PLN02896          9 ATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWK--------------EGDRLRLFRADLQEEGSFD   74 (353)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhc--------------cCCeEEEEECCCCCHHHHH
Confidence            56799999999999999999999999999999998765544332111              0156889999999999999


Q ss_pred             HHhcCCCEEEEccccCcccc----CCCCCc-----chhhHHHHHHHHHHHHHcC-CCEEEEEccCCCCCCCC--------
Q 016901          159 PALGNASVVICCIGASEKEV----FDITGP-----YRIDFQATKNLVDAATIAK-VNHFIMVSSLGTNKFGF--------  220 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~~~~----~~~~~~-----~~~nv~g~~~ll~a~~~~~-v~r~V~~SS~~~~~~~~--------  220 (380)
                      +++.++|+|||+|+......    .++...     ++.|+.|+.+++++|++.+ +++||++||.+++....        
T Consensus        75 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~  154 (353)
T PLN02896         75 EAVKGCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAV  154 (353)
T ss_pred             HHHcCCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCc
Confidence            99999999999998653221    122222     3445699999999998875 88999999976643110        


Q ss_pred             -chh---hh-------chhhHHHHHHHHHHHHHH----HCCCCEEEEecCcccCCCcccccccce-----eeccCCc---
Q 016901          221 -PAA---IL-------NLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKETHNI-----TLSQEDT---  277 (380)
Q Consensus       221 -~~~---~~-------~~~~~Y~~sK~~~E~~l~----~~g~~~~ivRpg~v~gp~~~~~~~~~~-----~~~~~~~---  277 (380)
                       .+.   +.       .+.++|+.+|.++|++++    .+|++++++||+++|||+........+     .+.....   
T Consensus       155 ~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~  234 (353)
T PLN02896        155 VDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFS  234 (353)
T ss_pred             cCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCccccc
Confidence             111   11       122479999999998875    379999999999999997531100000     0000000   


Q ss_pred             ---------ccCCCCCHHHHHHHHHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCCC
Q 016901          278 ---------LFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQ  330 (380)
Q Consensus       278 ---------~~~~~i~~~DvA~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~  330 (380)
                               ...++||++|+|++++.+++.+..  ++.|+ +++...++.|+++++.+.++.
T Consensus       235 ~~~~~~~~~~~~dfi~v~Dva~a~~~~l~~~~~--~~~~~-~~~~~~s~~el~~~i~~~~~~  293 (353)
T PLN02896        235 ILSAVNSRMGSIALVHIEDICDAHIFLMEQTKA--EGRYI-CCVDSYDMSELINHLSKEYPC  293 (353)
T ss_pred             cccccccccCceeEEeHHHHHHHHHHHHhCCCc--CccEE-ecCCCCCHHHHHHHHHHhCCC
Confidence                     012689999999999999987542  45675 567788999999999998863

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.96  E-value=3e-28  Score=238.05  Aligned_cols=229  Identities=25%  Similarity=0.335  Sum_probs=176.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHH--HHHHHhhhhcccccccCCCCCCceEEEEcCCCChh
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL--VQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~  155 (380)
                      ..+++|+|||||||||++++++|+++|++|++++|+.++....  ...+..             ..++++++.+|++|++
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~-------------~~~~v~~v~~Dl~d~~  124 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKK-------------ELPGAEVVFGDVTDAD  124 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhh-------------hcCCceEEEeeCCCHH
Confidence            3678999999999999999999999999999999987643211  000000             1157899999999999


Q ss_pred             cHHHHhc----CCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCCchhhhchhhHH
Q 016901          156 QIEPALG----NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGV  231 (380)
Q Consensus       156 ~~~~a~~----~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~~Y  231 (380)
                      ++.++++    ++|+||||++....   .....+++|+.++.+++++|++.|++|||++||.+++.         +...|
T Consensus       125 ~l~~~~~~~~~~~D~Vi~~aa~~~~---~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~---------p~~~~  192 (390)
T PLN02657        125 SLRKVLFSEGDPVDVVVSCLASRTG---GVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQK---------PLLEF  192 (390)
T ss_pred             HHHHHHHHhCCCCcEEEECCccCCC---CCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccccC---------cchHH
Confidence            9999987    59999999985322   12344688999999999999999999999999987632         23458


Q ss_pred             HHHHHHHHHHHHH--CCCCEEEEecCcccCCCccc----ccccceeeccCCcc-cCCCCCHHHHHHHHHHHHhCCCCccC
Q 016901          232 LLWKRKAEEALIA--SGLPYTIVRPGGMERPTDAY----KETHNITLSQEDTL-FGGQVSNLQVAELLACMAKNRSLSYC  304 (380)
Q Consensus       232 ~~sK~~~E~~l~~--~g~~~~ivRpg~v~gp~~~~----~~~~~~~~~~~~~~-~~~~i~~~DvA~~i~~~l~~~~~~~~  304 (380)
                      ..+|...|+++++  .+++++||||+++|++....    .....+.+...... ...+||++|+|.+++.++.++. ..+
T Consensus       193 ~~sK~~~E~~l~~~~~gl~~tIlRp~~~~~~~~~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~~-~~~  271 (390)
T PLN02657        193 QRAKLKFEAELQALDSDFTYSIVRPTAFFKSLGGQVEIVKDGGPYVMFGDGKLCACKPISEADLASFIADCVLDES-KIN  271 (390)
T ss_pred             HHHHHHHHHHHHhccCCCCEEEEccHHHhcccHHHHHhhccCCceEEecCCcccccCceeHHHHHHHHHHHHhCcc-ccC
Confidence            8999999999986  89999999999999863211    11112222222222 2246999999999999998765 457


Q ss_pred             cEEEEecC-CCCCcchHHHHHHhcCCCCC
Q 016901          305 KVVEVIAE-TTAPLTPMEELLAKIPSQRA  332 (380)
Q Consensus       305 ~~~ni~~~-~~~s~~~~~e~~~~~~~~~~  332 (380)
                      ++||++++ +..|..|+++++.++.|...
T Consensus       272 ~~~~Iggp~~~~S~~Eia~~l~~~lG~~~  300 (390)
T PLN02657        272 KVLPIGGPGKALTPLEQGEMLFRILGKEP  300 (390)
T ss_pred             CEEEcCCCCcccCHHHHHHHHHHHhCCCC
Confidence            99999986 68899999999999998754

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.96  E-value=7.5e-29  Score=257.74  Aligned_cols=234  Identities=14%  Similarity=0.159  Sum_probs=176.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc-
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ-  156 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~-G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~-  156 (380)
                      .+|+|||||||||||++|+++|+++ |++|++++|.........                  ...+++++.+|++|... 
T Consensus       314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~------------------~~~~~~~~~gDl~d~~~~  375 (660)
T PRK08125        314 RRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFL------------------GHPRFHFVEGDISIHSEW  375 (660)
T ss_pred             cCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhc------------------CCCceEEEeccccCcHHH
Confidence            5789999999999999999999986 799999999765432211                  01468999999998655 


Q ss_pred             HHHHhcCCCEEEEccccCccc--cCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCC-----Cchhh-----
Q 016901          157 IEPALGNASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAI-----  224 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag~~~~~--~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~-----~~~~~-----  224 (380)
                      +++++.++|+|||+||.....  ..++...+++|+.++.+++++|++.+ ++|||+||..++...     .++.+     
T Consensus       376 l~~~l~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~-~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~  454 (660)
T PRK08125        376 IEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN-KRIIFPSTSEVYGMCTDKYFDEDTSNLIVG  454 (660)
T ss_pred             HHHHhcCCCEEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC-CeEEEEcchhhcCCCCCCCcCccccccccC
Confidence            577889999999999865321  22334457899999999999999988 799999998664321     11111     


Q ss_pred             -h-chhhHHHHHHHHHHHHHH----HCCCCEEEEecCcccCCCccccc-------------------ccceeeccCCccc
Q 016901          225 -L-NLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKE-------------------THNITLSQEDTLF  279 (380)
Q Consensus       225 -~-~~~~~Y~~sK~~~E~~l~----~~g~~~~ivRpg~v~gp~~~~~~-------------------~~~~~~~~~~~~~  279 (380)
                       . .+.+.|+.+|.++|++++    .+|++++++||+++|||++....                   ...+.+.......
T Consensus       455 p~~~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~  534 (660)
T PRK08125        455 PINKQRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQK  534 (660)
T ss_pred             CCCCCccchHHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCcee
Confidence             1 234579999999999985    36899999999999999752100                   0111122222334


Q ss_pred             CCCCCHHHHHHHHHHHHhCCC-CccCcEEEEecCC-CCCcchHHHHHHhcCCCC
Q 016901          280 GGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET-TAPLTPMEELLAKIPSQR  331 (380)
Q Consensus       280 ~~~i~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~-~~s~~~~~e~~~~~~~~~  331 (380)
                      .+++|++|+|++++.+++++. ...+++||+++++ ..|+.|+++.+.+..+..
T Consensus       535 rd~i~v~Dva~a~~~~l~~~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g~~  588 (660)
T PRK08125        535 RCFTDIRDGIEALFRIIENKDNRCDGQIINIGNPDNEASIRELAEMLLASFEKH  588 (660)
T ss_pred             eceeeHHHHHHHHHHHHhccccccCCeEEEcCCCCCceeHHHHHHHHHHHhccC
Confidence            478999999999999998753 1247899999986 689999999999998853

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.96  E-value=6.2e-29  Score=245.88  Aligned_cols=230  Identities=13%  Similarity=0.077  Sum_probs=168.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      +.|+|||||||||||++|+++|+++|++|++++|......+...  ..+            ...+++++.+|+.++    
T Consensus       118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~--~~~------------~~~~~~~i~~D~~~~----  179 (442)
T PLN02206        118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVM--HHF------------SNPNFELIRHDVVEP----  179 (442)
T ss_pred             CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhh--hhc------------cCCceEEEECCccCh----
Confidence            56899999999999999999999999999999875432111100  000            115688899998765    


Q ss_pred             HHhcCCCEEEEccccCccc--cCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCC-----Cch-----hhhc
Q 016901          159 PALGNASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPA-----AILN  226 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~~~--~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~-----~~~-----~~~~  226 (380)
                       ++.++|+|||+|+.....  ..++...+++|+.|+.+++++|++.++ +|||+||..++...     .+.     .+..
T Consensus       180 -~l~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~  257 (442)
T PLN02206        180 -ILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQVETYWGNVNPIG  257 (442)
T ss_pred             -hhcCCCEEEEeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECChHHhCCCCCCCCCccccccCCCCC
Confidence             345799999999854321  123445678999999999999999986 89999998774321     111     1222


Q ss_pred             hhhHHHHHHHHHHHHHH----HCCCCEEEEecCcccCCCccccc-------------ccceeeccCCcccCCCCCHHHHH
Q 016901          227 LFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKE-------------THNITLSQEDTLFGGQVSNLQVA  289 (380)
Q Consensus       227 ~~~~Y~~sK~~~E~~l~----~~g~~~~ivRpg~v~gp~~~~~~-------------~~~~~~~~~~~~~~~~i~~~DvA  289 (380)
                      +.+.|+.+|.++|+++.    +++++++++||+++|||+.....             ...+.+........+++|++|+|
T Consensus       258 ~~s~Y~~SK~~aE~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva  337 (442)
T PLN02206        258 VRSCYDEGKRTAETLTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLV  337 (442)
T ss_pred             ccchHHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHH
Confidence            35679999999999875    36899999999999999632110             11112222223334689999999


Q ss_pred             HHHHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCCCC
Q 016901          290 ELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (380)
Q Consensus       290 ~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~  331 (380)
                      ++++.++++..   +++||+++++..++.|+++.+.+..+..
T Consensus       338 ~ai~~a~e~~~---~g~yNIgs~~~~sl~Elae~i~~~~g~~  376 (442)
T PLN02206        338 EGLMRLMEGEH---VGPFNLGNPGEFTMLELAKVVQETIDPN  376 (442)
T ss_pred             HHHHHHHhcCC---CceEEEcCCCceeHHHHHHHHHHHhCCC
Confidence            99999987643   5699999999999999999999998753

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.96  E-value=6.3e-29  Score=235.59  Aligned_cols=229  Identities=24%  Similarity=0.208  Sum_probs=177.9

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHHh
Q 016901           82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPAL  161 (380)
Q Consensus        82 ~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a~  161 (380)
                      +|||||||||||++|+++|+++|++|++++|...+.....                    .++.++.+|++|.+.+.+++
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------------------~~~~~~~~d~~~~~~~~~~~   61 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL--------------------SGVEFVVLDLTDRDLVDELA   61 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc--------------------cccceeeecccchHHHHHHH
Confidence            4999999999999999999999999999999876543210                    36889999999998888888


Q ss_pred             cCC-CEEEEccccCccccCC---CCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCC------Cch-hhhchhhH
Q 016901          162 GNA-SVVICCIGASEKEVFD---ITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG------FPA-AILNLFWG  230 (380)
Q Consensus       162 ~~~-d~Vi~~Ag~~~~~~~~---~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~------~~~-~~~~~~~~  230 (380)
                      .++ |+|||+|+........   +...+.+|+.|+.+++++|++.++++|||.||.++....      .++ .+..+.+.
T Consensus        62 ~~~~d~vih~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~  141 (314)
T COG0451          62 KGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNP  141 (314)
T ss_pred             hcCCCEEEEccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCCCCcccccCCCCCCCH
Confidence            888 9999999976443332   224688999999999999999999999998886543321      122 23345557


Q ss_pred             HHHHHHHHHHHHHH----CCCCEEEEecCcccCCCccccccc-ce--------------eeccCCcccCCCCCHHHHHHH
Q 016901          231 VLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKETH-NI--------------TLSQEDTLFGGQVSNLQVAEL  291 (380)
Q Consensus       231 Y~~sK~~~E~~l~~----~g~~~~ivRpg~v~gp~~~~~~~~-~~--------------~~~~~~~~~~~~i~~~DvA~~  291 (380)
                      |+.+|+.+|+.++.    .|++++++||+++|||++...... ..              ...........++|++|++++
T Consensus       142 Yg~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  221 (314)
T COG0451         142 YGVSKLAAEQLLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADA  221 (314)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHH
Confidence            99999999999874    479999999999999986543110 00              011111111257999999999


Q ss_pred             HHHHHhCCCCccCcEEEEecCC-CCCcchHHHHHHhcCCCCCC
Q 016901          292 LACMAKNRSLSYCKVVEVIAET-TAPLTPMEELLAKIPSQRAE  333 (380)
Q Consensus       292 i~~~l~~~~~~~~~~~ni~~~~-~~s~~~~~e~~~~~~~~~~~  333 (380)
                      ++.+++++..  + .||++++. ..++.++++.+.+..+....
T Consensus       222 ~~~~~~~~~~--~-~~ni~~~~~~~~~~e~~~~~~~~~~~~~~  261 (314)
T COG0451         222 LLLALENPDG--G-VFNIGSGTAEITVRELAEAVAEAVGSKAP  261 (314)
T ss_pred             HHHHHhCCCC--c-EEEeCCCCCcEEHHHHHHHHHHHhCCCCc
Confidence            9999999774  3 99999997 88999999999999887654

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.96  E-value=8.6e-29  Score=258.20  Aligned_cols=237  Identities=14%  Similarity=0.129  Sum_probs=178.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHC--CCeEEEEeCCc--hhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCCh
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKL--GFRVRAGVRSV--QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~--G~~V~~l~R~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~  154 (380)
                      ++|+|||||||||||++|+++|+++  |++|++++|..  +....+..               .....+++++.+|++|.
T Consensus         5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~---------------~~~~~~v~~~~~Dl~d~   69 (668)
T PLN02260          5 EPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNP---------------SKSSPNFKFVKGDIASA   69 (668)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhh---------------cccCCCeEEEECCCCCh
Confidence            4679999999999999999999998  68999998753  12111110               00125799999999999


Q ss_pred             hcHHHHh--cCCCEEEEccccCccc--cCCCCCcchhhHHHHHHHHHHHHHcC-CCEEEEEccCCCCCCCC--------c
Q 016901          155 VQIEPAL--GNASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAK-VNHFIMVSSLGTNKFGF--------P  221 (380)
Q Consensus       155 ~~~~~a~--~~~d~Vi~~Ag~~~~~--~~~~~~~~~~nv~g~~~ll~a~~~~~-v~r~V~~SS~~~~~~~~--------~  221 (380)
                      +.+..++  .++|+|||+|+.....  ..+....+++|+.|+.+++++|++.+ +++|||+||..++....        +
T Consensus        70 ~~~~~~~~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E  149 (668)
T PLN02260         70 DLVNYLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHE  149 (668)
T ss_pred             HHHHHHHhhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccc
Confidence            8888766  5799999999965432  12334457899999999999999987 89999999987643211        1


Q ss_pred             hhhhchhhHHHHHHHHHHHHHHH----CCCCEEEEecCcccCCCccccc-----------ccceeeccCCcccCCCCCHH
Q 016901          222 AAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE-----------THNITLSQEDTLFGGQVSNL  286 (380)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~~----~g~~~~ivRpg~v~gp~~~~~~-----------~~~~~~~~~~~~~~~~i~~~  286 (380)
                      ..+..+.+.|+.+|..+|++++.    ++++++++||++||||++....           ...+.+........++||++
T Consensus       150 ~~~~~p~~~Y~~sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~  229 (668)
T PLN02260        150 ASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCE  229 (668)
T ss_pred             cCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecCCCceEeeEEHH
Confidence            12233566799999999998863    6899999999999999753211           11122222233334689999


Q ss_pred             HHHHHHHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCCCCC
Q 016901          287 QVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (380)
Q Consensus       287 DvA~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~~  332 (380)
                      |+|+++..+++...  .+++||+++++..++.|+++.+.+.+|...
T Consensus       230 Dva~a~~~~l~~~~--~~~vyni~~~~~~s~~el~~~i~~~~g~~~  273 (668)
T PLN02260        230 DVAEAFEVVLHKGE--VGHVYNIGTKKERRVIDVAKDICKLFGLDP  273 (668)
T ss_pred             HHHHHHHHHHhcCC--CCCEEEECCCCeeEHHHHHHHHHHHhCCCC
Confidence            99999999987654  378999999999999999999999988643

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.96  E-value=1.8e-28  Score=236.87  Aligned_cols=233  Identities=12%  Similarity=0.059  Sum_probs=172.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCe-EEEEeCCc--hhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFR-VRAGVRSV--QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~-V~~l~R~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      |+|||||||||||++|+++|+++|++ |+++.|..  ........    +           ....+++++.+|++|.+++
T Consensus         1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~----~-----------~~~~~~~~~~~Dl~d~~~~   65 (352)
T PRK10084          1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLAD----V-----------SDSERYVFEHADICDRAEL   65 (352)
T ss_pred             CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHh----c-----------ccCCceEEEEecCCCHHHH
Confidence            47999999999999999999999976 55555432  11111110    0           0014678899999999999


Q ss_pred             HHHhc--CCCEEEEccccCcc--ccCCCCCcchhhHHHHHHHHHHHHHc---------CCCEEEEEccCCCCCCC-----
Q 016901          158 EPALG--NASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIA---------KVNHFIMVSSLGTNKFG-----  219 (380)
Q Consensus       158 ~~a~~--~~d~Vi~~Ag~~~~--~~~~~~~~~~~nv~g~~~ll~a~~~~---------~v~r~V~~SS~~~~~~~-----  219 (380)
                      .++++  ++|+||||||....  ...+....+++|+.|+.+++++|++.         ++++|||+||..++...     
T Consensus        66 ~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~  145 (352)
T PRK10084         66 DRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDE  145 (352)
T ss_pred             HHHHHhcCCCEEEECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCcccc
Confidence            99996  48999999986532  22345667899999999999999874         46799999997664321     


Q ss_pred             ----------CchhhhchhhHHHHHHHHHHHHHH----HCCCCEEEEecCcccCCCccccc-----------ccceeecc
Q 016901          220 ----------FPAAILNLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKE-----------THNITLSQ  274 (380)
Q Consensus       220 ----------~~~~~~~~~~~Y~~sK~~~E~~l~----~~g~~~~ivRpg~v~gp~~~~~~-----------~~~~~~~~  274 (380)
                                .+..+..+.+.|+.+|.++|.+++    .+|++++++|++.+|||+.....           ...+.+..
T Consensus       146 ~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~  225 (352)
T PRK10084        146 VENSEELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYG  225 (352)
T ss_pred             ccccccCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEEeC
Confidence                      112234566789999999998875    36999999999999999752210           11122222


Q ss_pred             CCcccCCCCCHHHHHHHHHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCCC
Q 016901          275 EDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQ  330 (380)
Q Consensus       275 ~~~~~~~~i~~~DvA~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~  330 (380)
                      ......+++|++|+|++++.+++++.  .+++||+++++..++.++++.+++..+.
T Consensus       226 ~g~~~~~~v~v~D~a~a~~~~l~~~~--~~~~yni~~~~~~s~~~~~~~i~~~~~~  279 (352)
T PRK10084        226 KGDQIRDWLYVEDHARALYKVVTEGK--AGETYNIGGHNEKKNLDVVLTICDLLDE  279 (352)
T ss_pred             CCCeEEeeEEHHHHHHHHHHHHhcCC--CCceEEeCCCCcCcHHHHHHHHHHHhcc
Confidence            22334468999999999999998644  3789999999999999999999988875

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.96  E-value=8.5e-29  Score=233.98  Aligned_cols=215  Identities=12%  Similarity=0.024  Sum_probs=158.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      |+||||||+||||++|+++|+++| +|++++|...                              .+.+|++|.+.+.++
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~------------------------------~~~~Dl~d~~~~~~~   49 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST------------------------------DYCGDFSNPEGVAET   49 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc------------------------------cccCCCCCHHHHHHH
Confidence            479999999999999999999999 7988887521                              235899999999999


Q ss_pred             hc--CCCEEEEccccCcccc--CCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCC-----CchhhhchhhHH
Q 016901          161 LG--NASVVICCIGASEKEV--FDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNLFWGV  231 (380)
Q Consensus       161 ~~--~~d~Vi~~Ag~~~~~~--~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~-----~~~~~~~~~~~Y  231 (380)
                      ++  ++|+|||||+....+.  .++...+.+|+.|+.+++++|++.|+ +|||+||..++...     .+..+.+|.+.|
T Consensus        50 ~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g~-~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Y  128 (299)
T PRK09987         50 VRKIRPDVIVNAAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGA-WVVHYSTDYVFPGTGDIPWQETDATAPLNVY  128 (299)
T ss_pred             HHhcCCCEEEECCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEccceEECCCCCCCcCCCCCCCCCCHH
Confidence            97  5899999998654322  22334468999999999999999986 79999997664211     123345677789


Q ss_pred             HHHHHHHHHHHHHCCCCEEEEecCcccCCCccccc---------ccceeeccC--CcccCCCCCHHHHHHHHHHHHhCCC
Q 016901          232 LLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKE---------THNITLSQE--DTLFGGQVSNLQVAELLACMAKNRS  300 (380)
Q Consensus       232 ~~sK~~~E~~l~~~g~~~~ivRpg~v~gp~~~~~~---------~~~~~~~~~--~~~~~~~i~~~DvA~~i~~~l~~~~  300 (380)
                      +.+|+.+|++++.+..+++|+|++++|||++....         ...+.+..+  ......+...+|+++++..++..+.
T Consensus       129 g~sK~~~E~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~~~~~~~  208 (299)
T PRK09987        129 GETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELSVINDQFGAPTGAELLADCTAHAIRVALNKPE  208 (299)
T ss_pred             HHHHHHHHHHHHHhCCCEEEEecceecCCCCCCHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHHHhhccCC
Confidence            99999999999988889999999999999642110         111111111  1111112334556777776665443


Q ss_pred             CccCcEEEEecCCCCCcchHHHHHHhcCC
Q 016901          301 LSYCKVVEVIAETTAPLTPMEELLAKIPS  329 (380)
Q Consensus       301 ~~~~~~~ni~~~~~~s~~~~~e~~~~~~~  329 (380)
                      .  +++||+++++..|+.|+++.+.+..+
T Consensus       209 ~--~giyni~~~~~~s~~e~~~~i~~~~~  235 (299)
T PRK09987        209 V--AGLYHLVASGTTTWHDYAALVFEEAR  235 (299)
T ss_pred             C--CCeEEeeCCCCccHHHHHHHHHHHHH
Confidence            2  46999999999999999999977644

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.96  E-value=6.4e-29  Score=235.66  Aligned_cols=221  Identities=14%  Similarity=0.099  Sum_probs=159.1

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCCh---hc-HH
Q 016901           83 AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR---VQ-IE  158 (380)
Q Consensus        83 vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~---~~-~~  158 (380)
                      |||||||||||++|+++|+++|++|+++.|+.......                       ..+..+|+.|.   ++ +.
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~-----------------------~~~~~~~~~d~~~~~~~~~   58 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-----------------------VNLVDLDIADYMDKEDFLA   58 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH-----------------------HhhhhhhhhhhhhHHHHHH
Confidence            89999999999999999999999888877765432111                       01123444443   33 23


Q ss_pred             HHh-----cCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCC-----chhhhchh
Q 016901          159 PAL-----GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF-----PAAILNLF  228 (380)
Q Consensus       159 ~a~-----~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~-----~~~~~~~~  228 (380)
                      +++     .++|+|||+||.......+....+++|+.++.+++++|++.++ +|||+||.+++....     +..+..+.
T Consensus        59 ~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~-~~i~~SS~~vyg~~~~~~~~E~~~~~p~  137 (308)
T PRK11150         59 QIMAGDDFGDIEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTDDFIEEREYEKPL  137 (308)
T ss_pred             HHhcccccCCccEEEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHcCC-cEEEEcchHHhCcCCCCCCccCCCCCCC
Confidence            343     2699999999854332223334578999999999999999987 699999987643211     11234566


Q ss_pred             hHHHHHHHHHHHHHHH----CCCCEEEEecCcccCCCccccccc---------------ce-eeccCCcccCCCCCHHHH
Q 016901          229 WGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKETH---------------NI-TLSQEDTLFGGQVSNLQV  288 (380)
Q Consensus       229 ~~Y~~sK~~~E~~l~~----~g~~~~ivRpg~v~gp~~~~~~~~---------------~~-~~~~~~~~~~~~i~~~Dv  288 (380)
                      +.|+.+|.++|+++++    .+++++++||+++|||++......               .. ..........+++|++|+
T Consensus       138 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~  217 (308)
T PRK11150        138 NVYGYSKFLFDEYVRQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDV  217 (308)
T ss_pred             CHHHHHHHHHHHHHHHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHH
Confidence            7899999999988774    589999999999999975321100               00 111112223467999999


Q ss_pred             HHHHHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCCC
Q 016901          289 AELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQ  330 (380)
Q Consensus       289 A~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~  330 (380)
                      |++++.+++...   +++||+++++..++.|+++.+.++.+.
T Consensus       218 a~a~~~~~~~~~---~~~yni~~~~~~s~~el~~~i~~~~~~  256 (308)
T PRK11150        218 AAVNLWFWENGV---SGIFNCGTGRAESFQAVADAVLAYHKK  256 (308)
T ss_pred             HHHHHHHHhcCC---CCeEEcCCCCceeHHHHHHHHHHHhCC
Confidence            999999987643   579999999999999999999999874

>PLN02240 UDP-glucose 4-epimerase

Probab=99.96  E-value=6.7e-28  Score=232.78  Aligned_cols=245  Identities=16%  Similarity=0.099  Sum_probs=176.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++++|+|||||||||++++++|+++|++|++++|...........+....         .....+++++.+|++|++.+
T Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~D~~~~~~l   73 (352)
T PLN02240          3 LMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELA---------GDLGDNLVFHKVDLRDKEAL   73 (352)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhh---------cccCccceEEecCcCCHHHH
Confidence            456899999999999999999999999999999875432221111111110         00114688999999999999


Q ss_pred             HHHhc--CCCEEEEccccCcc--ccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCC-----Cchhhhchh
Q 016901          158 EPALG--NASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNLF  228 (380)
Q Consensus       158 ~~a~~--~~d~Vi~~Ag~~~~--~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~-----~~~~~~~~~  228 (380)
                      .++++  ++|+||||||....  ...++...+++|+.++.+++++|++.++++||++||.+++...     .+..+.++.
T Consensus        74 ~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~~~  153 (352)
T PLN02240         74 EKVFASTRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQPEEVPCTEEFPLSAT  153 (352)
T ss_pred             HHHHHhCCCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCC
Confidence            98886  68999999986432  1123344578999999999999999999999999997664311     122344456


Q ss_pred             hHHHHHHHHHHHHHHH-----CCCCEEEEecCcccCCCccc--cc------c-----------c---ceeecc------C
Q 016901          229 WGVLLWKRKAEEALIA-----SGLPYTIVRPGGMERPTDAY--KE------T-----------H---NITLSQ------E  275 (380)
Q Consensus       229 ~~Y~~sK~~~E~~l~~-----~g~~~~ivRpg~v~gp~~~~--~~------~-----------~---~~~~~~------~  275 (380)
                      ..|+.+|.++|++++.     .+++++++|++++||++...  ..      .           .   .+.+..      .
T Consensus       154 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  233 (352)
T PLN02240        154 NPYGRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKD  233 (352)
T ss_pred             CHHHHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCC
Confidence            7899999999998863     46889999999999874210  00      0           0   000100      1


Q ss_pred             CcccCCCCCHHHHHHHHHHHHhCC---CCccCcEEEEecCCCCCcchHHHHHHhcCCCC
Q 016901          276 DTLFGGQVSNLQVAELLACMAKNR---SLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (380)
Q Consensus       276 ~~~~~~~i~~~DvA~~i~~~l~~~---~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~  331 (380)
                      .....++||++|+|++++.++...   ....+++||+++++..|+.|+++.+.++.+..
T Consensus       234 g~~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~  292 (352)
T PLN02240        234 GTGVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTSVLEMVAAFEKASGKK  292 (352)
T ss_pred             CCEEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccCCCcEeHHHHHHHHHHHhCCC
Confidence            122335799999999999888642   11346899999999999999999999998753

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.96  E-value=3.7e-28  Score=230.50  Aligned_cols=233  Identities=13%  Similarity=0.063  Sum_probs=173.2

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCCch--hHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           82 LAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQ--RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        82 ~vlVtGatG~iG~~lv~~Ll~~G--~~V~~l~R~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +|+|||||||||++++++|+++|  ++|++++|...  ..+.+..    +.           ...+++++.+|++|++++
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~----~~-----------~~~~~~~~~~Dl~~~~~~   65 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLAD----LE-----------DNPRYRFVKGDIGDRELV   65 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhh----hc-----------cCCCcEEEEcCCcCHHHH
Confidence            48999999999999999999987  78998877432  1111111    00           014688999999999999


Q ss_pred             HHHhcC--CCEEEEccccCcc--ccCCCCCcchhhHHHHHHHHHHHHHcCCC-EEEEEccCCCCCCC------Cchhhhc
Q 016901          158 EPALGN--ASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVSSLGTNKFG------FPAAILN  226 (380)
Q Consensus       158 ~~a~~~--~d~Vi~~Ag~~~~--~~~~~~~~~~~nv~g~~~ll~a~~~~~v~-r~V~~SS~~~~~~~------~~~~~~~  226 (380)
                      .+++++  +|+|||+|+....  ...++...+++|+.++.+++++|.+.+.+ ++||+||..++...      .+..+..
T Consensus        66 ~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~  145 (317)
T TIGR01181        66 SRLFTEHQPDAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTETTPLA  145 (317)
T ss_pred             HHHHhhcCCCEEEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCCCCCCC
Confidence            999987  9999999986532  12234455789999999999999987544 89999997653321      1122334


Q ss_pred             hhhHHHHHHHHHHHHHH----HCCCCEEEEecCcccCCCcccc-----------cccceeeccCCcccCCCCCHHHHHHH
Q 016901          227 LFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYK-----------ETHNITLSQEDTLFGGQVSNLQVAEL  291 (380)
Q Consensus       227 ~~~~Y~~sK~~~E~~l~----~~g~~~~ivRpg~v~gp~~~~~-----------~~~~~~~~~~~~~~~~~i~~~DvA~~  291 (380)
                      +...|+.+|+.+|.+++    +.+++++++||+.+|||.....           ....+.+........+++|++|+|++
T Consensus       146 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~  225 (317)
T TIGR01181       146 PSSPYSASKAASDHLVRAYHRTYGLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRA  225 (317)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHH
Confidence            55679999999998875    4789999999999999964211           01111111222223468999999999


Q ss_pred             HHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCCCC
Q 016901          292 LACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (380)
Q Consensus       292 i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~  331 (380)
                      +..++++..  .+++||+++++..+..|+++++.+.++..
T Consensus       226 ~~~~~~~~~--~~~~~~~~~~~~~s~~~~~~~i~~~~~~~  263 (317)
T TIGR01181       226 IYLVLEKGR--VGETYNIGGGNERTNLEVVETILELLGKD  263 (317)
T ss_pred             HHHHHcCCC--CCceEEeCCCCceeHHHHHHHHHHHhCCC
Confidence            999997644  37899999999999999999999998853

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.96  E-value=4.4e-28  Score=231.33  Aligned_cols=229  Identities=25%  Similarity=0.189  Sum_probs=173.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      |+|+||||+||||+++++.|+++|++|++++|++++...+.                   ..+++++.+|++|.+++.++
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------------------~~~~~~~~~D~~~~~~l~~~   61 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLE-------------------GLDVEIVEGDLRDPASLRKA   61 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccc-------------------cCCceEEEeeCCCHHHHHHH
Confidence            47999999999999999999999999999999876532211                   13688999999999999999


Q ss_pred             hcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCC------Cchhhh---chhhHH
Q 016901          161 LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG------FPAAIL---NLFWGV  231 (380)
Q Consensus       161 ~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~------~~~~~~---~~~~~Y  231 (380)
                      ++++|+|||+|+.......++...+++|+.++.++++++.+.++++||++||..++...      .++.+.   .....|
T Consensus        62 ~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y  141 (328)
T TIGR03466        62 VAGCRALFHVAADYRLWAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHY  141 (328)
T ss_pred             HhCCCEEEEeceecccCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCCCCCcCccCCCCcccccChH
Confidence            99999999999854333334445578999999999999999999999999997664321      111111   123579


Q ss_pred             HHHHHHHHHHHHH----CCCCEEEEecCcccCCCcccccc-cce-------eeccCCcccCCCCCHHHHHHHHHHHHhCC
Q 016901          232 LLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKET-HNI-------TLSQEDTLFGGQVSNLQVAELLACMAKNR  299 (380)
Q Consensus       232 ~~sK~~~E~~l~~----~g~~~~ivRpg~v~gp~~~~~~~-~~~-------~~~~~~~~~~~~i~~~DvA~~i~~~l~~~  299 (380)
                      +.+|.++|+++++    ++++++++||+.+|||+...... ..+       ..........+++|++|+|++++.+++++
T Consensus       142 ~~sK~~~e~~~~~~~~~~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~  221 (328)
T TIGR03466       142 KRSKFLAEQAALEMAAEKGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYVDTGLNLVHVDDVAEGHLLALERG  221 (328)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCceeeCCCcceEEHHHHHHHHHHHHhCC
Confidence            9999999988864    68999999999999997532110 000       00000011125799999999999999875


Q ss_pred             CCccCcEEEEecCCCCCcchHHHHHHhcCCCC
Q 016901          300 SLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (380)
Q Consensus       300 ~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~  331 (380)
                      .  .+..|+++ ++..++.|+++.+.+++|..
T Consensus       222 ~--~~~~~~~~-~~~~s~~e~~~~i~~~~g~~  250 (328)
T TIGR03466       222 R--IGERYILG-GENLTLKQILDKLAEITGRP  250 (328)
T ss_pred             C--CCceEEec-CCCcCHHHHHHHHHHHhCCC
Confidence            4  36788775 67789999999999998864

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.96  E-value=4.8e-28  Score=232.88  Aligned_cols=240  Identities=14%  Similarity=-0.008  Sum_probs=176.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhH--HHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRA--ENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ++|+||||||+||||++++++|+++|++|++++|+.+..  ..+.. +..         .......+++++.+|++|.+.
T Consensus         5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~---------~~~~~~~~~~~~~~Dl~d~~~   74 (340)
T PLN02653          5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDH-IYI---------DPHPNKARMKLHYGDLSDASS   74 (340)
T ss_pred             CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhh-hcc---------ccccccCceEEEEecCCCHHH
Confidence            567899999999999999999999999999999875421  11111 000         000011468899999999999


Q ss_pred             HHHHhcC--CCEEEEccccCccc--cCCCCCcchhhHHHHHHHHHHHHHcCCC-----EEEEEccCCCCCCC----Cchh
Q 016901          157 IEPALGN--ASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVN-----HFIMVSSLGTNKFG----FPAA  223 (380)
Q Consensus       157 ~~~a~~~--~d~Vi~~Ag~~~~~--~~~~~~~~~~nv~g~~~ll~a~~~~~v~-----r~V~~SS~~~~~~~----~~~~  223 (380)
                      +.+++..  +|+|||||+.....  ..++...+++|+.|+.+++++|++.+++     +|||+||..++...    .+..
T Consensus        75 ~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~E~~  154 (340)
T PLN02653         75 LRRWLDDIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPPQSETT  154 (340)
T ss_pred             HHHHHHHcCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCCCCCCC
Confidence            9998874  69999999864322  1233444689999999999999988865     89999997664321    1223


Q ss_pred             hhchhhHHHHHHHHHHHHHH----HCCCCEEEEecCcccCCCccccc--------------cccee-eccCCcccCCCCC
Q 016901          224 ILNLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKE--------------THNIT-LSQEDTLFGGQVS  284 (380)
Q Consensus       224 ~~~~~~~Y~~sK~~~E~~l~----~~g~~~~ivRpg~v~gp~~~~~~--------------~~~~~-~~~~~~~~~~~i~  284 (380)
                      +..+.+.|+.+|.++|.+++    +++++++..|+.++|||+.....              ..... .........+++|
T Consensus       155 ~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~  234 (340)
T PLN02653        155 PFHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDWGF  234 (340)
T ss_pred             CCCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceeccee
Confidence            34466789999999999885    36888899999999998532110              00111 1122233447899


Q ss_pred             HHHHHHHHHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCCCC
Q 016901          285 NLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (380)
Q Consensus       285 ~~DvA~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~  331 (380)
                      ++|+|++++.++++..   ++.||+++++..|+.|+++.+.++.+..
T Consensus       235 v~D~a~a~~~~~~~~~---~~~yni~~g~~~s~~e~~~~i~~~~g~~  278 (340)
T PLN02653        235 AGDYVEAMWLMLQQEK---PDDYVVATEESHTVEEFLEEAFGYVGLN  278 (340)
T ss_pred             HHHHHHHHHHHHhcCC---CCcEEecCCCceeHHHHHHHHHHHcCCC
Confidence            9999999999998753   5789999999999999999999998853

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.96  E-value=6.1e-28  Score=226.49  Aligned_cols=213  Identities=17%  Similarity=0.139  Sum_probs=168.2

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHHh
Q 016901           82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPAL  161 (380)
Q Consensus        82 ~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a~  161 (380)
                      +|||||||||||++++++|+++|++|++++|+                                  .+|+.|.+++.+++
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~----------------------------------~~d~~~~~~~~~~~   46 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS----------------------------------QLDLTDPEALERLL   46 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc----------------------------------ccCCCCHHHHHHHH
Confidence            48999999999999999999999999999874                                  26889999999999


Q ss_pred             cCC--CEEEEccccCcccc--CCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCC-----CchhhhchhhHHH
Q 016901          162 GNA--SVVICCIGASEKEV--FDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNLFWGVL  232 (380)
Q Consensus       162 ~~~--d~Vi~~Ag~~~~~~--~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~-----~~~~~~~~~~~Y~  232 (380)
                      +++  |+||||||......  ......+++|+.++.+++++|++.+. +||++||..++...     .+..+.++.+.|+
T Consensus        47 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~  125 (287)
T TIGR01214        47 RAIRPDAVVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARHGA-RLVHISTDYVFDGEGKRPYREDDATNPLNVYG  125 (287)
T ss_pred             HhCCCCEEEECCccccccccccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeeeeecCCCCCCCCCCCCCCCcchhh
Confidence            865  99999998653221  12334578999999999999998885 89999998764321     1222334567899


Q ss_pred             HHHHHHHHHHHHCCCCEEEEecCcccCCCcc--ccc--------ccceeeccCCcccCCCCCHHHHHHHHHHHHhCCCCc
Q 016901          233 LWKRKAEEALIASGLPYTIVRPGGMERPTDA--YKE--------THNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLS  302 (380)
Q Consensus       233 ~sK~~~E~~l~~~g~~~~ivRpg~v~gp~~~--~~~--------~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~~~~  302 (380)
                      .+|..+|++++..+.+++++||+++|||++.  +..        ...+...  ...+..+++++|+|+++..+++.+. .
T Consensus       126 ~~K~~~E~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~v~Dva~a~~~~~~~~~-~  202 (287)
T TIGR01214       126 QSKLAGEQAIRAAGPNALIVRTSWLYGGGGGRNFVRTMLRLAGRGEELRVV--DDQIGSPTYAKDLARVIAALLQRLA-R  202 (287)
T ss_pred             HHHHHHHHHHHHhCCCeEEEEeeecccCCCCCCHHHHHHHHhhcCCCceEe--cCCCcCCcCHHHHHHHHHHHHhhcc-C
Confidence            9999999999988999999999999999741  100        0111111  1234578999999999999998763 3


Q ss_pred             cCcEEEEecCCCCCcchHHHHHHhcCCCCC
Q 016901          303 YCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (380)
Q Consensus       303 ~~~~~ni~~~~~~s~~~~~e~~~~~~~~~~  332 (380)
                      .+++||+++++..+..|+++++.+.++...
T Consensus       203 ~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~  232 (287)
T TIGR01214       203 ARGVYHLANSGQCSWYEFAQAIFEEAGADG  232 (287)
T ss_pred             CCCeEEEECCCCcCHHHHHHHHHHHhCccc
Confidence            478999999999999999999999998754

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.96  E-value=1.3e-27  Score=229.58  Aligned_cols=239  Identities=15%  Similarity=0.101  Sum_probs=173.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      |+|||||||||||++++++|+++|++|++++|...........+...            ...++.++.+|++|.+.+.++
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~Dl~d~~~~~~~   68 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERL------------GGKHPTFVEGDIRNEALLTEI   68 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHh------------cCCCceEEEccCCCHHHHHHH
Confidence            57999999999999999999999999999876533222211111111            013577889999999999988


Q ss_pred             hc--CCCEEEEccccCccc--cCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCC-----Cchhhh-chhhH
Q 016901          161 LG--NASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAIL-NLFWG  230 (380)
Q Consensus       161 ~~--~~d~Vi~~Ag~~~~~--~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~-----~~~~~~-~~~~~  230 (380)
                      +.  ++|+|||+||.....  .......+++|+.++.+++++|++.++++||++||.+++...     .+..+. .+...
T Consensus        69 ~~~~~~d~vvh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~  148 (338)
T PRK10675         69 LHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQSP  148 (338)
T ss_pred             HhcCCCCEEEECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCCCCCccccccCCCCCCCh
Confidence            86  699999999864321  122344578999999999999999999999999998764321     111122 45678


Q ss_pred             HHHHHHHHHHHHHH-----CCCCEEEEecCcccCCCcc--ccc--------------------ccceeecc------CCc
Q 016901          231 VLLWKRKAEEALIA-----SGLPYTIVRPGGMERPTDA--YKE--------------------THNITLSQ------EDT  277 (380)
Q Consensus       231 Y~~sK~~~E~~l~~-----~g~~~~ivRpg~v~gp~~~--~~~--------------------~~~~~~~~------~~~  277 (380)
                      |+.+|..+|+++++     .+++++++|++++|||...  +..                    ...+.+..      ...
T Consensus       149 Y~~sK~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  228 (338)
T PRK10675        149 YGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGT  228 (338)
T ss_pred             hHHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCCc
Confidence            99999999998863     3789999999999886311  000                    00010100      112


Q ss_pred             ccCCCCCHHHHHHHHHHHHhCC-CCccCcEEEEecCCCCCcchHHHHHHhcCCCC
Q 016901          278 LFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (380)
Q Consensus       278 ~~~~~i~~~DvA~~i~~~l~~~-~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~  331 (380)
                      ...+++|++|+|++++.++++. ....+++||+++++..++.|+++++.+..+..
T Consensus       229 ~~~~~v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~  283 (338)
T PRK10675        229 GVRDYIHVMDLADGHVAAMEKLANKPGVHIYNLGAGVGSSVLDVVNAFSKACGKP  283 (338)
T ss_pred             EEEeeEEHHHHHHHHHHHHHhhhccCCCceEEecCCCceeHHHHHHHHHHHhCCC
Confidence            2236899999999999998752 21346899999999999999999999998864

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.96  E-value=3.8e-28  Score=220.81  Aligned_cols=209  Identities=28%  Similarity=0.265  Sum_probs=164.5

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHHhc
Q 016901           83 AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALG  162 (380)
Q Consensus        83 vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a~~  162 (380)
                      |||||||||||++++++|+++|+.|+.+.|+..........                  .+++++.+|+.|.+.++++++
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~------------------~~~~~~~~dl~~~~~~~~~~~   62 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKK------------------LNVEFVIGDLTDKEQLEKLLE   62 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHH------------------TTEEEEESETTSHHHHHHHHH
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCcccccccccccccccccc------------------ceEEEEEeecccccccccccc
Confidence            79999999999999999999999999999987654332210                  379999999999999999997


Q ss_pred             CC--CEEEEccccCc--cccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCC-----CchhhhchhhHHHH
Q 016901          163 NA--SVVICCIGASE--KEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNLFWGVLL  233 (380)
Q Consensus       163 ~~--d~Vi~~Ag~~~--~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~-----~~~~~~~~~~~Y~~  233 (380)
                      +.  |+|||+|+...  ....+....++.|+.++.+++++|++.++++|||+||..++...     .++.+..+.+.|+.
T Consensus        63 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~~  142 (236)
T PF01370_consen   63 KANIDVVIHLAAFSSNPESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYGA  142 (236)
T ss_dssp             HHTESEEEEEBSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHHH
T ss_pred             ccCceEEEEeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            65  99999998752  22234455578899999999999999999999999998774433     12233456778999


Q ss_pred             HHHHHHHHHHH----CCCCEEEEecCcccCCC---cccc-----------cccceeeccCCcccCCCCCHHHHHHHHHHH
Q 016901          234 WKRKAEEALIA----SGLPYTIVRPGGMERPT---DAYK-----------ETHNITLSQEDTLFGGQVSNLQVAELLACM  295 (380)
Q Consensus       234 sK~~~E~~l~~----~g~~~~ivRpg~v~gp~---~~~~-----------~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~  295 (380)
                      +|...|++++.    .+++++++||+.+|||.   ....           ....+.+........+++|++|+|++++.+
T Consensus       143 ~K~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  222 (236)
T PF01370_consen  143 SKRAAEELLRDYAKKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAA  222 (236)
T ss_dssp             HHHHHHHHHHHHHHHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHH
Confidence            99999999873    58999999999999998   1110           111123333334455789999999999999


Q ss_pred             HhCCCCccCcEEEEe
Q 016901          296 AKNRSLSYCKVVEVI  310 (380)
Q Consensus       296 l~~~~~~~~~~~ni~  310 (380)
                      ++++. ..+++|||+
T Consensus       223 ~~~~~-~~~~~yNig  236 (236)
T PF01370_consen  223 LENPK-AAGGIYNIG  236 (236)
T ss_dssp             HHHSC-TTTEEEEES
T ss_pred             HhCCC-CCCCEEEeC
Confidence            99988 669999985

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PLN02996 fatty acyl-CoA reductase

Probab=99.96  E-value=1.1e-27  Score=240.10  Aligned_cols=256  Identities=14%  Similarity=0.075  Sum_probs=178.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCC---CeEEEEeCCchh---HHHHHHHHHhhhh-cccccccC----CCCCCceEE
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLG---FRVRAGVRSVQR---AENLVQSVKQMKL-DGELANKG----IQPVEMLEL  146 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G---~~V~~l~R~~~~---~~~~~~~~~~~~~-~~~~~~~~----~~~~~~v~~  146 (380)
                      .++++|||||||||||++|++.|++.+   .+|++++|....   .+.+...+.+..+ .......+    .....++++
T Consensus         9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~   88 (491)
T PLN02996          9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP   88 (491)
T ss_pred             hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence            367899999999999999999999875   368999997642   2222212111100 00000000    001268999


Q ss_pred             EEcCCCC-------hhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHc-CCCEEEEEccCCCCCC
Q 016901          147 VECDLEK-------RVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA-KVNHFIMVSSLGTNKF  218 (380)
Q Consensus       147 ~~~Dl~d-------~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~-~v~r~V~~SS~~~~~~  218 (380)
                      +.||+++       .+.++++++++|+|||+|+..... .++...+++|+.|+.+++++|++. ++++|||+||..++..
T Consensus        89 i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~-~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vyG~  167 (491)
T PLN02996         89 VPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFD-ERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVCGE  167 (491)
T ss_pred             EecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCc-CCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEecC
Confidence            9999984       345677888999999999976543 344556789999999999999986 6889999999766421


Q ss_pred             CC--------c--h-------------------------------h---------------hhchhhHHHHHHHHHHHHH
Q 016901          219 GF--------P--A-------------------------------A---------------ILNLFWGVLLWKRKAEEAL  242 (380)
Q Consensus       219 ~~--------~--~-------------------------------~---------------~~~~~~~Y~~sK~~~E~~l  242 (380)
                      ..        +  .                               .               .....+.|+.||+.+|+++
T Consensus       168 ~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE~lv  247 (491)
T PLN02996        168 KSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEMLL  247 (491)
T ss_pred             CCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHHHHH
Confidence            10        0  0                               0               0011245999999999999


Q ss_pred             HH--CCCCEEEEecCcccCCCcccccc-----------------cce-eeccCCcccCCCCCHHHHHHHHHHHHhCC--C
Q 016901          243 IA--SGLPYTIVRPGGMERPTDAYKET-----------------HNI-TLSQEDTLFGGQVSNLQVAELLACMAKNR--S  300 (380)
Q Consensus       243 ~~--~g~~~~ivRpg~v~gp~~~~~~~-----------------~~~-~~~~~~~~~~~~i~~~DvA~~i~~~l~~~--~  300 (380)
                      ++  .+++++|+||++|+||+......                 +.. .+..+.....++||++|++++++.++...  .
T Consensus       248 ~~~~~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~~~~~~~  327 (491)
T PLN02996        248 GNFKENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVAMAAHAGG  327 (491)
T ss_pred             HHhcCCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHHHHHhhcc
Confidence            86  58999999999999986432110                 001 11222333457899999999999998763  1


Q ss_pred             CccCcEEEEecC--CCCCcchHHHHHHhcCCCCCCC
Q 016901          301 LSYCKVVEVIAE--TTAPLTPMEELLAKIPSQRAEP  334 (380)
Q Consensus       301 ~~~~~~~ni~~~--~~~s~~~~~e~~~~~~~~~~~~  334 (380)
                      ...+.+||++++  +..++.++.+.+.++.+..+..
T Consensus       328 ~~~~~vYNi~s~~~~~~s~~ei~~~~~~~~~~~p~~  363 (491)
T PLN02996        328 QGSEIIYHVGSSLKNPVKFSNLHDFAYRYFSKNPWI  363 (491)
T ss_pred             CCCCcEEEecCCCCCcccHHHHHHHHHHHhhhCCCc
Confidence            123679999999  8889999999999998876644

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.96  E-value=1.9e-26  Score=212.53  Aligned_cols=229  Identities=38%  Similarity=0.552  Sum_probs=170.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCC-hh
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK-RV  155 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d-~~  155 (380)
                      ...+|+|+||||||+||++++++|+++|++|++++|++++......                 ...+++++.+|++| .+
T Consensus        14 ~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-----------------~~~~~~~~~~Dl~d~~~   76 (251)
T PLN00141         14 NVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP-----------------QDPSLQIVRADVTEGSD   76 (251)
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc-----------------cCCceEEEEeeCCCCHH
Confidence            3467899999999999999999999999999999999876543211                 01468999999998 46


Q ss_pred             cHHHHh-cCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCCch--h----hhchh
Q 016901          156 QIEPAL-GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPA--A----ILNLF  228 (380)
Q Consensus       156 ~~~~a~-~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~~--~----~~~~~  228 (380)
                      .+.+.+ .++|+|||++|....  .+....+++|+.++.++++++++.+++|||++||.+++......  .    ..+..
T Consensus        77 ~l~~~~~~~~d~vi~~~g~~~~--~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~  154 (251)
T PLN00141         77 KLVEAIGDDSDAVICATGFRRS--FDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQILNPAYIFLNLF  154 (251)
T ss_pred             HHHHHhhcCCCEEEECCCCCcC--CCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCCcccccCcchhHHHHH
Confidence            777788 689999999885321  12334467899999999999999999999999998764321111  1    11222


Q ss_pred             hHHHHHHHHHHHHHHHCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHHHHhCCCCccCcEEE
Q 016901          229 WGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVE  308 (380)
Q Consensus       229 ~~Y~~sK~~~E~~l~~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~~~~~~~~~n  308 (380)
                      ..|...|..+|+++++.|+++++||||+++++...    ..+..........++|+++|+|+++..++.++. ..+.+++
T Consensus       155 ~~~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~~~----~~~~~~~~~~~~~~~i~~~dvA~~~~~~~~~~~-~~~~~~~  229 (251)
T PLN00141        155 GLTLVAKLQAEKYIRKSGINYTIVRPGGLTNDPPT----GNIVMEPEDTLYEGSISRDQVAEVAVEALLCPE-SSYKVVE  229 (251)
T ss_pred             HHHHHHHHHHHHHHHhcCCcEEEEECCCccCCCCC----ceEEECCCCccccCcccHHHHHHHHHHHhcChh-hcCcEEE
Confidence            33556799999999999999999999999976321    112222222233468999999999999998877 4568899


Q ss_pred             EecCCCCCcchHHHHHHhcCC
Q 016901          309 VIAETTAPLTPMEELLAKIPS  329 (380)
Q Consensus       309 i~~~~~~s~~~~~e~~~~~~~  329 (380)
                      +.+........+.++++.+..
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~  250 (251)
T PLN00141        230 IVARADAPKRSYKDLFASIKQ  250 (251)
T ss_pred             EecCCCCCchhHHHHHHHhhc
Confidence            998666655677777766543

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.95  E-value=5.5e-27  Score=244.59  Aligned_cols=236  Identities=18%  Similarity=0.136  Sum_probs=172.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHH--HCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCCh----
Q 016901           81 NLAFVAGATGKVGSRTVRELL--KLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR----  154 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll--~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~----  154 (380)
                      |+|||||||||||++|+++|+  ++|++|++++|+... ..+......+            ...+++++.+|++|+    
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~-~~~~~~~~~~------------~~~~v~~~~~Dl~~~~~~~   67 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL-SRLEALAAYW------------GADRVVPLVGDLTEPGLGL   67 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH-HHHHHHHHhc------------CCCcEEEEecccCCccCCc
Confidence            479999999999999999999  579999999996533 2221111111            014689999999984    


Q ss_pred             --hcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCC----ch---hhh
Q 016901          155 --VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF----PA---AIL  225 (380)
Q Consensus       155 --~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~----~~---~~~  225 (380)
                        +.++++ .++|+||||||..... .......++|+.|+.+++++|++.++++|||+||.+++....    +.   ...
T Consensus        68 ~~~~~~~l-~~~D~Vih~Aa~~~~~-~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~~~~~e~~~~~~~  145 (657)
T PRK07201         68 SEADIAEL-GDIDHVVHLAAIYDLT-ADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDYEGVFREDDFDEGQ  145 (657)
T ss_pred             CHHHHHHh-cCCCEEEECceeecCC-CCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCccCccccccchhhc
Confidence              345555 8999999999865432 233445789999999999999999999999999987743211    01   112


Q ss_pred             chhhHHHHHHHHHHHHHHH-CCCCEEEEecCcccCCCcccccc---------------cc----eeeccCCcccCCCCCH
Q 016901          226 NLFWGVLLWKRKAEEALIA-SGLPYTIVRPGGMERPTDAYKET---------------HN----ITLSQEDTLFGGQVSN  285 (380)
Q Consensus       226 ~~~~~Y~~sK~~~E~~l~~-~g~~~~ivRpg~v~gp~~~~~~~---------------~~----~~~~~~~~~~~~~i~~  285 (380)
                      .+..+|+.+|+.+|+++++ .|++++++||++||||.......               ..    +..........+++|+
T Consensus       146 ~~~~~Y~~sK~~~E~~~~~~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v  225 (657)
T PRK07201        146 GLPTPYHRTKFEAEKLVREECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVPV  225 (657)
T ss_pred             CCCCchHHHHHHHHHHHHHcCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeeeeH
Confidence            2345699999999999984 78999999999999985321100               00    0000011111257999


Q ss_pred             HHHHHHHHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCCCCC
Q 016901          286 LQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (380)
Q Consensus       286 ~DvA~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~~  332 (380)
                      +|+++++..++..+. ..+++||+++++..++.|+++.+.+.+|...
T Consensus       226 ddva~ai~~~~~~~~-~~g~~~ni~~~~~~s~~el~~~i~~~~g~~~  271 (657)
T PRK07201        226 DYVADALDHLMHKDG-RDGQTFHLTDPKPQRVGDIYNAFARAAGAPP  271 (657)
T ss_pred             HHHHHHHHHHhcCcC-CCCCEEEeCCCCCCcHHHHHHHHHHHhCCCc
Confidence            999999999987654 4588999999999999999999999988754

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.95  E-value=7.6e-27  Score=212.71  Aligned_cols=248  Identities=17%  Similarity=0.124  Sum_probs=187.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      .++||||||+||||+|.+-+|+++|+.|++++.=......-...++++-.          ....+.++++|+.|.+.+++
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~----------~~~~v~f~~~Dl~D~~~L~k   71 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLG----------EGKSVFFVEGDLNDAEALEK   71 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcC----------CCCceEEEEeccCCHHHHHH
Confidence            46899999999999999999999999999987633222111122222111          12689999999999999999


Q ss_pred             Hhc--CCCEEEEcccc--CccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCC-----chhhhc-hhh
Q 016901          160 ALG--NASVVICCIGA--SEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF-----PAAILN-LFW  229 (380)
Q Consensus       160 a~~--~~d~Vi~~Ag~--~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~-----~~~~~~-~~~  229 (380)
                      +|+  .+|.|+|.|+.  ......++..++..|+.|+.+++++|++++++.+||.||+.++....     ++.+.. +.+
T Consensus        72 vF~~~~fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~ip~te~~~t~~p~~  151 (343)
T KOG1371|consen   72 LFSEVKFDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKVPITEEDPTDQPTN  151 (343)
T ss_pred             HHhhcCCceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCcceeeccCcCCCCCCCC
Confidence            996  58999999984  45667788888999999999999999999999999999998843221     122333 677


Q ss_pred             HHHHHHHHHHHHHHH----CCCCEEEEecCcccC--CCccccc-----cccee----------------e-----ccCCc
Q 016901          230 GVLLWKRKAEEALIA----SGLPYTIVRPGGMER--PTDAYKE-----THNIT----------------L-----SQEDT  277 (380)
Q Consensus       230 ~Y~~sK~~~E~~l~~----~g~~~~ivRpg~v~g--p~~~~~~-----~~~~~----------------~-----~~~~~  277 (380)
                      +|+.+|.++|+++..    .++.++.||..+++|  |.+....     ...+.                .     ..+..
T Consensus       152 pyg~tK~~iE~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~v~g~d~~t~dgt  231 (343)
T KOG1371|consen  152 PYGKTKKAIEEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQVVGRDYTTIDGT  231 (343)
T ss_pred             cchhhhHHHHHHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccccccchhhcccccceeecCcccccCCC
Confidence            899999999999874    568999999999998  5432211     00000                0     01113


Q ss_pred             ccCCCCCHHHHHHHHHHHHhCCCC-ccCcEEEEecCCCCCcchHHHHHHhcCCCCCCCccc
Q 016901          278 LFGGQVSNLQVAELLACMAKNRSL-SYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPKES  337 (380)
Q Consensus       278 ~~~~~i~~~DvA~~i~~~l~~~~~-~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~~~~~~~  337 (380)
                      ...+.||+.|.|+..+.++..... ..-.+||++.+...+..++...+++..|.+.+.+..
T Consensus       232 ~vrdyi~v~Dla~~h~~al~k~~~~~~~~i~Nlgtg~g~~V~~lv~a~~k~~g~~~k~~~v  292 (343)
T KOG1371|consen  232 IVRDYIHVLDLADGHVAALGKLRGAAEFGVYNLGTGKGSSVLELVTAFEKALGVKIKKKVV  292 (343)
T ss_pred             eeecceeeEehHHHHHHHhhccccchheeeEeecCCCCccHHHHHHHHHHHhcCCCCcccc
Confidence            334679999999999999987552 223599999999999999999999999876654443

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.95  E-value=4.3e-27  Score=222.58  Aligned_cols=213  Identities=19%  Similarity=0.148  Sum_probs=161.2

Q ss_pred             EEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHHhc-
Q 016901           84 FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALG-  162 (380)
Q Consensus        84 lVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a~~-  162 (380)
                      ||||||||||++|++.|+++|++|+++.+.                                 ..+|++|.+++.++++ 
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~---------------------------------~~~Dl~~~~~l~~~~~~   47 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH---------------------------------KELDLTRQADVEAFFAK   47 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc---------------------------------ccCCCCCHHHHHHHHhc
Confidence            699999999999999999999988765432                                 1379999999999886 


Q ss_pred             -CCCEEEEccccCcc---ccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCC-----chh----hhchhh
Q 016901          163 -NASVVICCIGASEK---EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF-----PAA----ILNLFW  229 (380)
Q Consensus       163 -~~d~Vi~~Ag~~~~---~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~-----~~~----~~~~~~  229 (380)
                       ++|+|||||+....   ...++...+++|+.++.+++++|++.++++|||+||..++....     +..    +..+..
T Consensus        48 ~~~d~Vih~A~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~  127 (306)
T PLN02725         48 EKPTYVILAAAKVGGIHANMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTN  127 (306)
T ss_pred             cCCCEEEEeeeeecccchhhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCc
Confidence             47999999986431   12234456789999999999999999999999999987743211     111    122322


Q ss_pred             -HHHHHHHHHHHHHH----HCCCCEEEEecCcccCCCcccccc-------------------cceee-ccCCcccCCCCC
Q 016901          230 -GVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKET-------------------HNITL-SQEDTLFGGQVS  284 (380)
Q Consensus       230 -~Y~~sK~~~E~~l~----~~g~~~~ivRpg~v~gp~~~~~~~-------------------~~~~~-~~~~~~~~~~i~  284 (380)
                       .|+.+|.++|++++    ..+++++++||+++|||++.+...                   ....+ ........++||
T Consensus       128 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~  207 (306)
T PLN02725        128 EWYAIAKIAGIKMCQAYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLH  207 (306)
T ss_pred             chHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeecccc
Confidence             49999999998765    479999999999999997532110                   00111 122222346899


Q ss_pred             HHHHHHHHHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCCCC
Q 016901          285 NLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (380)
Q Consensus       285 ~~DvA~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~  331 (380)
                      ++|++++++.++++..  ..+.||++++...++.|+++.+.+.++..
T Consensus       208 v~Dv~~~~~~~~~~~~--~~~~~ni~~~~~~s~~e~~~~i~~~~~~~  252 (306)
T PLN02725        208 VDDLADAVVFLMRRYS--GAEHVNVGSGDEVTIKELAELVKEVVGFE  252 (306)
T ss_pred             HHHHHHHHHHHHhccc--cCcceEeCCCCcccHHHHHHHHHHHhCCC
Confidence            9999999999998754  25678999999999999999999998754

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.95  E-value=5.9e-27  Score=222.43  Aligned_cols=225  Identities=14%  Similarity=0.082  Sum_probs=166.7

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHHh
Q 016901           83 AFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPAL  161 (380)
Q Consensus        83 vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a~  161 (380)
                      |||||||||||+++++.|+++|+ +|+++.|..... .+..                   .....+.+|+++.+.++.+.
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~~~-------------------~~~~~~~~d~~~~~~~~~~~   60 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KFLN-------------------LADLVIADYIDKEDFLDRLE   60 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hhhh-------------------hhheeeeccCcchhHHHHHH
Confidence            69999999999999999999997 788887654321 1110                   01135678888887777665


Q ss_pred             ----cCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCC----chh-hhchhhHHH
Q 016901          162 ----GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF----PAA-ILNLFWGVL  232 (380)
Q Consensus       162 ----~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~----~~~-~~~~~~~Y~  232 (380)
                          .++|+|||||+.......+....+++|+.++.+++++|.+.++ +|||+||.+++....    ++. +..+.+.|+
T Consensus        61 ~~~~~~~D~vvh~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~v~~SS~~vy~~~~~~~~e~~~~~~p~~~Y~  139 (314)
T TIGR02197        61 KGAFGKIEAIFHQGACSDTTETDGEYMMENNYQYSKRLLDWCAEKGI-PFIYASSAATYGDGEAGFREGRELERPLNVYG  139 (314)
T ss_pred             hhccCCCCEEEECccccCccccchHHHHHHHHHHHHHHHHHHHHhCC-cEEEEccHHhcCCCCCCcccccCcCCCCCHHH
Confidence                4799999999865444444555678999999999999999887 799999987743211    111 123567899


Q ss_pred             HHHHHHHHHHHH------CCCCEEEEecCcccCCCcccccc---------------cceeecc------CCcccCCCCCH
Q 016901          233 LWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKET---------------HNITLSQ------EDTLFGGQVSN  285 (380)
Q Consensus       233 ~sK~~~E~~l~~------~g~~~~ivRpg~v~gp~~~~~~~---------------~~~~~~~------~~~~~~~~i~~  285 (380)
                      .+|..+|.++++      .+++++++||+.+|||++.....               ..+.+..      ......+++|+
T Consensus       140 ~sK~~~e~~~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v  219 (314)
T TIGR02197       140 YSKFLFDQYVRRRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYV  219 (314)
T ss_pred             HHHHHHHHHHHHHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEH
Confidence            999999998864      35789999999999997532110               0111111      11222368999


Q ss_pred             HHHHHHHHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCCCC
Q 016901          286 LQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (380)
Q Consensus       286 ~DvA~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~  331 (380)
                      +|++++++.++.. .  .+++||+++++..|..|+++.+.+.++..
T Consensus       220 ~D~a~~i~~~~~~-~--~~~~yni~~~~~~s~~e~~~~i~~~~g~~  262 (314)
T TIGR02197       220 KDVVDVNLWLLEN-G--VSGIFNLGTGRARSFNDLADAVFKALGKD  262 (314)
T ss_pred             HHHHHHHHHHHhc-c--cCceEEcCCCCCccHHHHHHHHHHHhCCC
Confidence            9999999999987 3  36799999999999999999999998864

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PLN00016 RNA-binding protein; Provisional

Probab=99.95  E-value=4.7e-27  Score=229.22  Aligned_cols=223  Identities=16%  Similarity=0.190  Sum_probs=165.2

Q ss_pred             CCCeEEEE----cCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH----HHHhhhhcccccccCCCCCCceEEEEcC
Q 016901           79 DDNLAFVA----GATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQ----SVKQMKLDGELANKGIQPVEMLELVECD  150 (380)
Q Consensus        79 ~~~~vlVt----GatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~v~~~~~D  150 (380)
                      ++++||||    |||||||++|+++|+++||+|++++|+......+..    .+..+            ...+++++.+|
T Consensus        51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l------------~~~~v~~v~~D  118 (378)
T PLN00016         51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSEL------------SSAGVKTVWGD  118 (378)
T ss_pred             ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHh------------hhcCceEEEec
Confidence            55789999    999999999999999999999999998754322110    00000            01358899999


Q ss_pred             CCChhcHHHHh--cCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCC--chhhhc
Q 016901          151 LEKRVQIEPAL--GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF--PAAILN  226 (380)
Q Consensus       151 l~d~~~~~~a~--~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~--~~~~~~  226 (380)
                      +.|   +.+++  .++|+|||+++.              ++.++.+++++|++.|++||||+||.+++....  +.....
T Consensus       119 ~~d---~~~~~~~~~~d~Vi~~~~~--------------~~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~p~~E~~  181 (378)
T PLN00016        119 PAD---VKSKVAGAGFDVVYDNNGK--------------DLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHVEGD  181 (378)
T ss_pred             HHH---HHhhhccCCccEEEeCCCC--------------CHHHHHHHHHHHHHcCCCEEEEEccHhhcCCCCCCCCCCCC
Confidence            987   44444  479999999752              256789999999999999999999988754221  111111


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCEEEEecCcccCCCcccc----------cccceeeccCCcccCCCCCHHHHHHHHHHHH
Q 016901          227 LFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYK----------ETHNITLSQEDTLFGGQVSNLQVAELLACMA  296 (380)
Q Consensus       227 ~~~~Y~~sK~~~E~~l~~~g~~~~ivRpg~v~gp~~~~~----------~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l  296 (380)
                      +..++. +|..+|.++++.+++++++||+++|||+....          ....+.+........+++|++|+|++++.++
T Consensus       182 ~~~p~~-sK~~~E~~l~~~~l~~~ilRp~~vyG~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l  260 (378)
T PLN00016        182 AVKPKA-GHLEVEAYLQKLGVNWTSFRPQYIYGPGNNKDCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMFALVV  260 (378)
T ss_pred             cCCCcc-hHHHHHHHHHHcCCCeEEEeceeEECCCCCCchHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHHHHHHh
Confidence            122222 89999999999999999999999999964221          0111222222333346899999999999999


Q ss_pred             hCCCCccCcEEEEecCCCCCcchHHHHHHhcCCCCC
Q 016901          297 KNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (380)
Q Consensus       297 ~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~~  332 (380)
                      .++. ..+++||+++++..++.|+++.+.+..|...
T Consensus       261 ~~~~-~~~~~yni~~~~~~s~~el~~~i~~~~g~~~  295 (378)
T PLN00016        261 GNPK-AAGQIFNIVSDRAVTFDGMAKACAKAAGFPE  295 (378)
T ss_pred             cCcc-ccCCEEEecCCCccCHHHHHHHHHHHhCCCC
Confidence            8865 4479999999999999999999999988754

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.95  E-value=4.3e-26  Score=220.45  Aligned_cols=243  Identities=19%  Similarity=0.180  Sum_probs=173.2

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCCchhHH---HHHHHHHhhhhcccccccCCCCC-CceEEEEcCCCCh-
Q 016901           82 LAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAE---NLVQSVKQMKLDGELANKGIQPV-EMLELVECDLEKR-  154 (380)
Q Consensus        82 ~vlVtGatG~iG~~lv~~Ll~~G--~~V~~l~R~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~Dl~d~-  154 (380)
                      +|+|||||||||++++++|+++|  ++|++++|+.+...   .+.+.+....+..      .... .+++++.+|++++ 
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~------~~~~~~~v~~~~~D~~~~~   74 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQ------EDLARERIEVVAGDLSEPR   74 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCC------chhhhCCEEEEeCCcCccc
Confidence            48999999999999999999999  67999999876432   3323232222110      0001 4799999999864 


Q ss_pred             -----hcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCCc-----h--
Q 016901          155 -----VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFP-----A--  222 (380)
Q Consensus       155 -----~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~-----~--  222 (380)
                           +.+..+.+++|+|||||+..... ..+...+++|+.|+.+++++|.+.++++|||+||.+++.....     .  
T Consensus        75 ~gl~~~~~~~~~~~~d~vih~a~~~~~~-~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~~~~~~~~~  153 (367)
T TIGR01746        75 LGLSDAEWERLAENVDTIVHNGALVNWV-YPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDLSTVTEDDA  153 (367)
T ss_pred             CCcCHHHHHHHHhhCCEEEeCCcEeccC-CcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCCCCcccccc
Confidence                 45667778999999999865421 2233446789999999999999999989999999877533110     0  


Q ss_pred             ---hhhchhhHHHHHHHHHHHHHHH---CCCCEEEEecCcccCCCccc--ccccce-----------eeccCCcccCCCC
Q 016901          223 ---AILNLFWGVLLWKRKAEEALIA---SGLPYTIVRPGGMERPTDAY--KETHNI-----------TLSQEDTLFGGQV  283 (380)
Q Consensus       223 ---~~~~~~~~Y~~sK~~~E~~l~~---~g~~~~ivRpg~v~gp~~~~--~~~~~~-----------~~~~~~~~~~~~i  283 (380)
                         .......+|+.+|+.+|.++++   .|++++++|||.++|+....  .....+           ..+........++
T Consensus       154 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  233 (367)
T TIGR01746       154 IVTPPPGLAGGYAQSKWVAELLVREASDRGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAYPDSPELTEDLT  233 (367)
T ss_pred             ccccccccCCChHHHHHHHHHHHHHHHhcCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCCCCCCCccccCcc
Confidence               0112235799999999998874   59999999999999973211  000000           0111111123589


Q ss_pred             CHHHHHHHHHHHHhCCCC-ccCcEEEEecCCCCCcchHHHHHHhcCCCCC
Q 016901          284 SNLQVAELLACMAKNRSL-SYCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (380)
Q Consensus       284 ~~~DvA~~i~~~l~~~~~-~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~~  332 (380)
                      +++|+|++++.++.++.. ..+++||+++++..++.++++.+.+ .|...
T Consensus       234 ~vddva~ai~~~~~~~~~~~~~~~~~v~~~~~~s~~e~~~~i~~-~g~~~  282 (367)
T TIGR01746       234 PVDYVARAIVALSSQPAASAGGPVFHVVNPEPVSLDEFLEWLER-AGYNL  282 (367)
T ss_pred             cHHHHHHHHHHHHhCCCcccCCceEEecCCCCCCHHHHHHHHHH-cCCCC
Confidence            999999999999887652 1278999999999999999999998 66543

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.95  E-value=6.8e-26  Score=198.53  Aligned_cols=180  Identities=33%  Similarity=0.350  Sum_probs=147.5

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHHhc
Q 016901           83 AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALG  162 (380)
Q Consensus        83 vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a~~  162 (380)
                      |+|+||||++|++++++|+++|++|++++|++++.+.  .                   .+++++++|+.|++++.++++
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~--~-------------------~~~~~~~~d~~d~~~~~~al~   59 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED--S-------------------PGVEIIQGDLFDPDSVKAALK   59 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH--C-------------------TTEEEEESCTTCHHHHHHHHT
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc--c-------------------cccccceeeehhhhhhhhhhh
Confidence            7999999999999999999999999999999987765  1                   789999999999999999999


Q ss_pred             CCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCCch---hhhchhhHHHHHHHHHH
Q 016901          163 NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPA---AILNLFWGVLLWKRKAE  239 (380)
Q Consensus       163 ~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~~---~~~~~~~~Y~~sK~~~E  239 (380)
                      ++|+|||++|....           +...++++++++++.+++|+|++|+++++......   ........|...|..+|
T Consensus        60 ~~d~vi~~~~~~~~-----------~~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  128 (183)
T PF13460_consen   60 GADAVIHAAGPPPK-----------DVDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARDKREAE  128 (183)
T ss_dssp             TSSEEEECCHSTTT-----------HHHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHHHHHHH
T ss_pred             hcchhhhhhhhhcc-----------cccccccccccccccccccceeeeccccCCCCCcccccccccchhhhHHHHHHHH
Confidence            99999999975432           37789999999999999999999999986532221   11223356899999999


Q ss_pred             HHHHHCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHHHHhC
Q 016901          240 EALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKN  298 (380)
Q Consensus       240 ~~l~~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~  298 (380)
                      +.+++.+++|++|||+++||+...   ...+... .......+||++|+|++++.++++
T Consensus       129 ~~~~~~~~~~~ivrp~~~~~~~~~---~~~~~~~-~~~~~~~~i~~~DvA~~~~~~l~~  183 (183)
T PF13460_consen  129 EALRESGLNWTIVRPGWIYGNPSR---SYRLIKE-GGPQGVNFISREDVAKAIVEALEN  183 (183)
T ss_dssp             HHHHHSTSEEEEEEESEEEBTTSS---SEEEESS-TSTTSHCEEEHHHHHHHHHHHHH-
T ss_pred             HHHHhcCCCEEEEECcEeEeCCCc---ceeEEec-cCCCCcCcCCHHHHHHHHHHHhCC
Confidence            999999999999999999998632   1122111 223333789999999999999875

...

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=99.94  E-value=1.7e-26  Score=205.63  Aligned_cols=231  Identities=15%  Similarity=0.110  Sum_probs=180.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      .+++|+||||.||||+|||+.|..+||.|++++.-.........              .....++++.+..|+..+    
T Consensus        26 ~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~--------------~~~~~~~fel~~hdv~~p----   87 (350)
T KOG1429|consen   26 QNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLE--------------HWIGHPNFELIRHDVVEP----   87 (350)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcc--------------hhccCcceeEEEeechhH----
Confidence            56899999999999999999999999999999864332211110              011126778888777654    


Q ss_pred             HHhcCCCEEEEccccCccc--cCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCCchh------------h
Q 016901          159 PALGNASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAA------------I  224 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~~~--~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~~~------------~  224 (380)
                       ++..+|.|+|+|+.....  ..++...+..|+.|+.+++-.|++.+ +||++.||+.++  ++|..            +
T Consensus        88 -l~~evD~IyhLAapasp~~y~~npvktIktN~igtln~lglakrv~-aR~l~aSTseVY--gdp~~hpq~e~ywg~vnp  163 (350)
T KOG1429|consen   88 -LLKEVDQIYHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARFLLASTSEVY--GDPLVHPQVETYWGNVNP  163 (350)
T ss_pred             -HHHHhhhhhhhccCCCCcccccCccceeeecchhhHHHHHHHHHhC-ceEEEeeccccc--CCcccCCCccccccccCc
Confidence             778899999999865432  33556678899999999999999998 699999999884  33321            3


Q ss_pred             hchhhHHHHHHHHHHHHHH----HCCCCEEEEecCcccCCCccccc-------------ccceeeccCCcccCCCCCHHH
Q 016901          225 LNLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKE-------------THNITLSQEDTLFGGQVSNLQ  287 (380)
Q Consensus       225 ~~~~~~Y~~sK~~~E~~l~----~~g~~~~ivRpg~v~gp~~~~~~-------------~~~~~~~~~~~~~~~~i~~~D  287 (380)
                      ..+...|...|..+|.++.    +.|+.+.|.|+.+.|||+..+..             ...+.+..++.....|.++.|
T Consensus       164 igpr~cydegKr~aE~L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD  243 (350)
T KOG1429|consen  164 IGPRSCYDEGKRVAETLCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSD  243 (350)
T ss_pred             CCchhhhhHHHHHHHHHHHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHH
Confidence            4566789999999999986    47899999999999999876533             233344455555567899999


Q ss_pred             HHHHHHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCCCCCCC
Q 016901          288 VAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP  334 (380)
Q Consensus       288 vA~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~~~~  334 (380)
                      +.++++.+++++.   ...+||++++..|+.|++|++.++.+....+
T Consensus       244 ~Vegll~Lm~s~~---~~pvNiGnp~e~Tm~elAemv~~~~~~~s~i  287 (350)
T KOG1429|consen  244 LVEGLLRLMESDY---RGPVNIGNPGEFTMLELAEMVKELIGPVSEI  287 (350)
T ss_pred             HHHHHHHHhcCCC---cCCcccCCccceeHHHHHHHHHHHcCCCcce
Confidence            9999999999877   4559999999999999999999998654443

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.94  E-value=8.2e-26  Score=215.30  Aligned_cols=237  Identities=21%  Similarity=0.167  Sum_probs=173.1

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHHh
Q 016901           82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPAL  161 (380)
Q Consensus        82 ~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a~  161 (380)
                      +||||||||+||+++++.|+++|++|+++.|...........+.              ...+++++.+|++|.+++.+++
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~D~~~~~~~~~~~   66 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGE--------------RITRVTFVEGDLRDRELLDRLF   66 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhc--------------cccceEEEECCCCCHHHHHHHH
Confidence            48999999999999999999999999988664332211111000              0125788999999999999988


Q ss_pred             c--CCCEEEEccccCcc--ccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCC-----CchhhhchhhHHH
Q 016901          162 G--NASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNLFWGVL  232 (380)
Q Consensus       162 ~--~~d~Vi~~Ag~~~~--~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~-----~~~~~~~~~~~Y~  232 (380)
                      .  ++|+||||||....  ...+....++.|+.++.+++++|.+.++++||++||.+++...     .+..+..+...|+
T Consensus        67 ~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y~  146 (328)
T TIGR01179        67 EEHKIDAVIHFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPSSIPISEDSPLGPINPYG  146 (328)
T ss_pred             HhCCCcEEEECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCCCCCCCccccCCCCCCCchH
Confidence            5  69999999986422  1223445578899999999999999998999999997653211     1122334556799


Q ss_pred             HHHHHHHHHHHH-----CCCCEEEEecCcccCCCcccc-------cc--------------cceeecc------CCcccC
Q 016901          233 LWKRKAEEALIA-----SGLPYTIVRPGGMERPTDAYK-------ET--------------HNITLSQ------EDTLFG  280 (380)
Q Consensus       233 ~sK~~~E~~l~~-----~g~~~~ivRpg~v~gp~~~~~-------~~--------------~~~~~~~------~~~~~~  280 (380)
                      .+|..+|.+++.     .+++++++||+.+|||.....       ..              ..+.+..      ......
T Consensus       147 ~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  226 (328)
T TIGR01179       147 RSKLMSERILRDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVR  226 (328)
T ss_pred             HHHHHHHHHHHHHHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEE
Confidence            999999988763     689999999999999853110       00              0011100      111223


Q ss_pred             CCCCHHHHHHHHHHHHhCCC-CccCcEEEEecCCCCCcchHHHHHHhcCCCCC
Q 016901          281 GQVSNLQVAELLACMAKNRS-LSYCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (380)
Q Consensus       281 ~~i~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~~  332 (380)
                      ++||++|+|+++..++.... ...+++||+++++..++.|+++.+.+++|...
T Consensus       227 ~~v~~~D~a~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~ei~~~~~~~~g~~~  279 (328)
T TIGR01179       227 DYIHVMDLADAHLAALEYLLNGGESHVYNLGYGQGFSVLEVIEAFKKVSGVDF  279 (328)
T ss_pred             eeeeHHHHHHHHHHHHhhhhcCCCcceEEcCCCCcccHHHHHHHHHHHhCCCc
Confidence            58999999999999987532 13478999999999999999999999998643

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PRK05865 hypothetical protein; Provisional

Probab=99.94  E-value=4.5e-26  Score=237.31  Aligned_cols=197  Identities=18%  Similarity=0.185  Sum_probs=159.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      |+|+|||||||||++++++|+++|++|++++|+.....                      ..++.++.+|++|.+++.++
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~~----------------------~~~v~~v~gDL~D~~~l~~a   58 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDSW----------------------PSSADFIAADIRDATAVESA   58 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhhc----------------------ccCceEEEeeCCCHHHHHHH
Confidence            47999999999999999999999999999999753210                      04588999999999999999


Q ss_pred             hcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCCchhhhchhhHHHHHHHHHHH
Q 016901          161 LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEE  240 (380)
Q Consensus       161 ~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~  240 (380)
                      ++++|+|||||+....       .+++|+.++.+++++|++.++++|||+||..                    |..+|+
T Consensus        59 l~~vD~VVHlAa~~~~-------~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~--------------------K~aaE~  111 (854)
T PRK05865         59 MTGADVVAHCAWVRGR-------NDHINIDGTANVLKAMAETGTGRIVFTSSGH--------------------QPRVEQ  111 (854)
T ss_pred             HhCCCEEEECCCcccc-------hHHHHHHHHHHHHHHHHHcCCCeEEEECCcH--------------------HHHHHH
Confidence            9999999999975321       4689999999999999999999999999842                    889999


Q ss_pred             HHHHCCCCEEEEecCcccCCCccc-ccc-ccee-ec-cCCcccCCCCCHHHHHHHHHHHHhCCCCccCcEEEEecCCCCC
Q 016901          241 ALIASGLPYTIVRPGGMERPTDAY-KET-HNIT-LS-QEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAP  316 (380)
Q Consensus       241 ~l~~~g~~~~ivRpg~v~gp~~~~-~~~-~~~~-~~-~~~~~~~~~i~~~DvA~~i~~~l~~~~~~~~~~~ni~~~~~~s  316 (380)
                      ++++++++++++||+++|||+... ... .... .. .......++||++|+|+++..+++++. ..+++||+++++..|
T Consensus       112 ll~~~gl~~vILRp~~VYGP~~~~~i~~ll~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~-~~ggvyNIgsg~~~S  190 (854)
T PRK05865        112 MLADCGLEWVAVRCALIFGRNVDNWVQRLFALPVLPAGYADRVVQVVHSDDAQRLLVRALLDTV-IDSGPVNLAAPGELT  190 (854)
T ss_pred             HHHHcCCCEEEEEeceEeCCChHHHHHHHhcCceeccCCCCceEeeeeHHHHHHHHHHHHhCCC-cCCCeEEEECCCccc
Confidence            999999999999999999996321 111 0111 11 111122268999999999999987654 346899999999999


Q ss_pred             cchHHHHHHhc
Q 016901          317 LTPMEELLAKI  327 (380)
Q Consensus       317 ~~~~~e~~~~~  327 (380)
                      +.|+++.+.+.
T Consensus       191 i~EIae~l~~~  201 (854)
T PRK05865        191 FRRIAAALGRP  201 (854)
T ss_pred             HHHHHHHHhhh
Confidence            99999998764

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.94  E-value=1.4e-25  Score=211.57  Aligned_cols=240  Identities=18%  Similarity=0.141  Sum_probs=174.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G--~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ++.+++||||+||+|+||+++|++++  .+|++++..+.......+..            +. ...+++++.+|+.|...
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~------------~~-~~~~v~~~~~D~~~~~~   69 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELT------------GF-RSGRVTVILGDLLDANS   69 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhh------------cc-cCCceeEEecchhhhhh
Confidence            56789999999999999999999998  89999988764211111100            00 13789999999999999


Q ss_pred             HHHHhcCCCEEEEccccCccc--cCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCCc------h--hhhc
Q 016901          157 IEPALGNASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFP------A--AILN  226 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag~~~~~--~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~------~--~~~~  226 (380)
                      +..++.++ .|+|||+.....  ..+....+++|+.||.+++++|.+.|++++||+||..+...+.+      .  .+..
T Consensus        70 i~~a~~~~-~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~  148 (361)
T KOG1430|consen   70 ISNAFQGA-VVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPIINGDESLPYPLK  148 (361)
T ss_pred             hhhhccCc-eEEEeccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeecccCCCCCCCccc
Confidence            99999999 888888644222  22466678999999999999999999999999999877443322      1  1233


Q ss_pred             hhhHHHHHHHHHHHHHHHC----CCCEEEEecCcccCCCccccc----------ccceeeccCCcccCCCCCHHHHHHHH
Q 016901          227 LFWGVLLWKRKAEEALIAS----GLPYTIVRPGGMERPTDAYKE----------THNITLSQEDTLFGGQVSNLQVAELL  292 (380)
Q Consensus       227 ~~~~Y~~sK~~~E~~l~~~----g~~~~ivRpg~v~gp~~~~~~----------~~~~~~~~~~~~~~~~i~~~DvA~~i  292 (380)
                      ....|+.||..+|+++++.    ++..++|||..||||++....          ......+.. ..+.++++.+-+|.+.
T Consensus       149 ~~d~Y~~sKa~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~~~~~~i~~~~~~g~~~f~~g~~-~~~~~~~~~~Nva~ah  227 (361)
T KOG1430|consen  149 HIDPYGESKALAEKLVLEANGSDDLYTCALRPPGIYGPGDKRLLPKIVEALKNGGFLFKIGDG-ENLNDFTYGENVAWAH  227 (361)
T ss_pred             cccccchHHHHHHHHHHHhcCCCCeeEEEEccccccCCCCccccHHHHHHHHccCceEEeecc-ccccceEEechhHHHH
Confidence            4458999999999998853    388999999999999874321          111122222 3344566666565555


Q ss_pred             HHHHh----CCCCccCcEEEEecCCCCCcchHHHHHHhcCCCCCC
Q 016901          293 ACMAK----NRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE  333 (380)
Q Consensus       293 ~~~l~----~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~~~  333 (380)
                      +.+..    ......|+.|+|.+++....-+....+.+.+|....
T Consensus       228 ilA~~aL~~~~~~~~Gq~yfI~d~~p~~~~~~~~~l~~~lg~~~~  272 (361)
T KOG1430|consen  228 ILAARALLDKSPSVNGQFYFITDDTPVRFFDFLSPLVKALGYCLP  272 (361)
T ss_pred             HHHHHHHHhcCCccCceEEEEeCCCcchhhHHHHHHHHhcCCCCC
Confidence            54432    334468999999999988666666677777776554

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.94  E-value=2.5e-25  Score=208.81  Aligned_cols=203  Identities=17%  Similarity=0.131  Sum_probs=157.4

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHHh
Q 016901           82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPAL  161 (380)
Q Consensus        82 ~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a~  161 (380)
                      +|+||||||+||++++++|+++|++|++++|++++...                      .+++.+.+|++|++++.+++
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~~----------------------~~~~~~~~d~~d~~~l~~a~   58 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSAG----------------------PNEKHVKFDWLDEDTWDNPF   58 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccccC----------------------CCCccccccCCCHHHHHHHH
Confidence            48999999999999999999999999999999865321                      45777889999999999998


Q ss_pred             ------cC-CCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCCchhhhchhhHHHHH
Q 016901          162 ------GN-ASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLW  234 (380)
Q Consensus       162 ------~~-~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~~Y~~s  234 (380)
                            .+ +|.|+|+++....           ......+++++|++.|++|||++||.++....             ..
T Consensus        59 ~~~~~~~g~~d~v~~~~~~~~~-----------~~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~~-------------~~  114 (285)
T TIGR03649        59 SSDDGMEPEISAVYLVAPPIPD-----------LAPPMIKFIDFARSKGVRRFVLLSASIIEKGG-------------PA  114 (285)
T ss_pred             hcccCcCCceeEEEEeCCCCCC-----------hhHHHHHHHHHHHHcCCCEEEEeeccccCCCC-------------ch
Confidence                  67 9999999864211           13456789999999999999999997663221             12


Q ss_pred             HHHHHHHHHHC-CCCEEEEecCcccCCCccc------ccccceeeccCCcccCCCCCHHHHHHHHHHHHhCCCCccCcEE
Q 016901          235 KRKAEEALIAS-GLPYTIVRPGGMERPTDAY------KETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVV  307 (380)
Q Consensus       235 K~~~E~~l~~~-g~~~~ivRpg~v~gp~~~~------~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~~~~~~~~~  307 (380)
                      +...|+++++. |++++++||++++++....      .....+.... ......+|+++|+|++++.++.++. ..++.|
T Consensus       115 ~~~~~~~l~~~~gi~~tilRp~~f~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~v~~~Dva~~~~~~l~~~~-~~~~~~  192 (285)
T TIGR03649       115 MGQVHAHLDSLGGVEYTVLRPTWFMENFSEEFHVEAIRKENKIYSAT-GDGKIPFVSADDIARVAYRALTDKV-APNTDY  192 (285)
T ss_pred             HHHHHHHHHhccCCCEEEEeccHHhhhhcccccccccccCCeEEecC-CCCccCcccHHHHHHHHHHHhcCCC-cCCCeE
Confidence            33456778775 9999999999988653111      0111122221 2223368999999999999998865 457899


Q ss_pred             EEecCCCCCcchHHHHHHhcCCCCC
Q 016901          308 EVIAETTAPLTPMEELLAKIPSQRA  332 (380)
Q Consensus       308 ni~~~~~~s~~~~~e~~~~~~~~~~  332 (380)
                      ++.+++..|..|+++.+.+++|+..
T Consensus       193 ~l~g~~~~s~~eia~~l~~~~g~~v  217 (285)
T TIGR03649       193 VVLGPELLTYDDVAEILSRVLGRKI  217 (285)
T ss_pred             EeeCCccCCHHHHHHHHHHHhCCce
Confidence            9999999999999999999999754

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.93  E-value=5.1e-25  Score=201.11  Aligned_cols=215  Identities=16%  Similarity=0.120  Sum_probs=173.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      |+|||||++|++|..|++.|. .+++|++++|..                                  .|++|++.+.++
T Consensus         1 M~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~----------------------------------~Ditd~~~v~~~   45 (281)
T COG1091           1 MKILITGANGQLGTELRRALP-GEFEVIATDRAE----------------------------------LDITDPDAVLEV   45 (281)
T ss_pred             CcEEEEcCCChHHHHHHHHhC-CCceEEeccCcc----------------------------------ccccChHHHHHH
Confidence            349999999999999999998 679999988852                                  799999999999


Q ss_pred             hc--CCCEEEEccccCcccc--CCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCC-----CCCchhhhchhhHH
Q 016901          161 LG--NASVVICCIGASEKEV--FDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNK-----FGFPAAILNLFWGV  231 (380)
Q Consensus       161 ~~--~~d~Vi~~Ag~~~~~~--~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~-----~~~~~~~~~~~~~Y  231 (380)
                      +.  ..|+|||+|+....+.  .+++..+.+|..|+.++.++|.+.|. ++||+||--+.+     ...+.+..+|.+-|
T Consensus        46 i~~~~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga-~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvY  124 (281)
T COG1091          46 IRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVGA-RLVHISTDYVFDGEKGGPYKETDTPNPLNVY  124 (281)
T ss_pred             HHhhCCCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHhCC-eEEEeecceEecCCCCCCCCCCCCCCChhhh
Confidence            97  5799999999764433  23455688999999999999999997 799999954422     12345567788899


Q ss_pred             HHHHHHHHHHHHHCCCCEEEEecCcccCCCc-cccc------ccceeeccCCcccCCCCCHHHHHHHHHHHHhCCCCccC
Q 016901          232 LLWKRKAEEALIASGLPYTIVRPGGMERPTD-AYKE------THNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYC  304 (380)
Q Consensus       232 ~~sK~~~E~~l~~~g~~~~ivRpg~v~gp~~-~~~~------~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~~~~~~  304 (380)
                      |.||+++|+.+++.+-+..|||.+|+||..+ ++..      .....+......++.+++..|+|+++..++.....  +
T Consensus       125 G~sKl~GE~~v~~~~~~~~I~Rtswv~g~~g~nFv~tml~la~~~~~l~vv~Dq~gsPt~~~dlA~~i~~ll~~~~~--~  202 (281)
T COG1091         125 GRSKLAGEEAVRAAGPRHLILRTSWVYGEYGNNFVKTMLRLAKEGKELKVVDDQYGSPTYTEDLADAILELLEKEKE--G  202 (281)
T ss_pred             hHHHHHHHHHHHHhCCCEEEEEeeeeecCCCCCHHHHHHHHhhcCCceEEECCeeeCCccHHHHHHHHHHHHhcccc--C
Confidence            9999999999999999999999999999854 2211      11112233344566789999999999999987653  4


Q ss_pred             cEEEEecCCCCCcchHHHHHHhcCCCCCC
Q 016901          305 KVVEVIAETTAPLTPMEELLAKIPSQRAE  333 (380)
Q Consensus       305 ~~~ni~~~~~~s~~~~~e~~~~~~~~~~~  333 (380)
                      .+||+.+....|+.|+++.+.+.++..+.
T Consensus       203 ~~yH~~~~g~~Swydfa~~I~~~~~~~~~  231 (281)
T COG1091         203 GVYHLVNSGECSWYEFAKAIFEEAGVDGE  231 (281)
T ss_pred             cEEEEeCCCcccHHHHHHHHHHHhCCCcc
Confidence            59999999999999999999999886663

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=99.93  E-value=1.3e-25  Score=199.94  Aligned_cols=229  Identities=23%  Similarity=0.259  Sum_probs=183.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      +.++-.+.|+|||||+|+++|..|++.|.+|++-.|..+....-      +++-|+        .+++-+...|+.|+++
T Consensus        58 S~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~------lkvmGd--------LGQvl~~~fd~~DedS  123 (391)
T KOG2865|consen   58 SVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRH------LKVMGD--------LGQVLFMKFDLRDEDS  123 (391)
T ss_pred             cccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhh------eeeccc--------ccceeeeccCCCCHHH
Confidence            44778899999999999999999999999999999965432211      122222        2689999999999999


Q ss_pred             HHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCCchhhhchhhHHHHHHH
Q 016901          157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKR  236 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~~Y~~sK~  236 (380)
                      ++++++...+|||+.|..-+  ...-.+.++|+.+.+.+.+.|++.|+.|||++|+.++.-        ..-+-|..+|.
T Consensus       124 Ir~vvk~sNVVINLIGrd~e--Tknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lganv--------~s~Sr~LrsK~  193 (391)
T KOG2865|consen  124 IRAVVKHSNVVINLIGRDYE--TKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGANV--------KSPSRMLRSKA  193 (391)
T ss_pred             HHHHHHhCcEEEEeeccccc--cCCcccccccchHHHHHHHHHHhhChhheeehhhccccc--------cChHHHHHhhh
Confidence            99999999999999984311  111234689999999999999999999999999988531        22345899999


Q ss_pred             HHHHHHHHCCCCEEEEecCcccCCCccccc--------ccceee-ccCCcccCCCCCHHHHHHHHHHHHhCCCCccCcEE
Q 016901          237 KAEEALIASGLPYTIVRPGGMERPTDAYKE--------THNITL-SQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVV  307 (380)
Q Consensus       237 ~~E~~l~~~g~~~~ivRpg~v~gp~~~~~~--------~~~~~~-~~~~~~~~~~i~~~DvA~~i~~~l~~~~~~~~~~~  307 (380)
                      ++|..+++.-...||+||..|||..+.+..        .+.+.+ ..+......+|++.|||++|+++++++. +.|++|
T Consensus       194 ~gE~aVrdafPeAtIirPa~iyG~eDrfln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkDp~-s~Gkty  272 (391)
T KOG2865|consen  194 AGEEAVRDAFPEATIIRPADIYGTEDRFLNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKDPD-SMGKTY  272 (391)
T ss_pred             hhHHHHHhhCCcceeechhhhcccchhHHHHHHHHHHhcCceeeecCCcceeeccEEEehHHHHHHHhccCcc-ccCcee
Confidence            999999998889999999999998765421        222333 2333445568999999999999999997 889999


Q ss_pred             EEecCCCCCcchHHHHHHhcCCC
Q 016901          308 EVIAETTAPLTPMEELLAKIPSQ  330 (380)
Q Consensus       308 ni~~~~~~s~~~~~e~~~~~~~~  330 (380)
                      +.+++..+.+.|+++++-++...
T Consensus       273 e~vGP~~yql~eLvd~my~~~~~  295 (391)
T KOG2865|consen  273 EFVGPDRYQLSELVDIMYDMARE  295 (391)
T ss_pred             eecCCchhhHHHHHHHHHHHHhh
Confidence            99999999999999998877654

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.93  E-value=1.5e-26  Score=217.04  Aligned_cols=217  Identities=20%  Similarity=0.180  Sum_probs=154.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      |+||||||+|+||++|++.|.++|++|+++.|.                                  ..|++|.+.+.+.
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~----------------------------------~~dl~d~~~~~~~   46 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGYEVIATSRS----------------------------------DLDLTDPEAVAKL   46 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT----------------------------------CS-TTSHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch----------------------------------hcCCCCHHHHHHH
Confidence            689999999999999999999999999998775                                  3799999999988


Q ss_pred             hc--CCCEEEEccccCcccc--CCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCC-----CchhhhchhhHH
Q 016901          161 LG--NASVVICCIGASEKEV--FDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNLFWGV  231 (380)
Q Consensus       161 ~~--~~d~Vi~~Ag~~~~~~--~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~-----~~~~~~~~~~~Y  231 (380)
                      +.  .+|+||||||....+.  .+++..+.+|+.++.+++++|.+.|. ++||+||..+++..     .++...+|.+.|
T Consensus        47 ~~~~~pd~Vin~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~~-~li~~STd~VFdG~~~~~y~E~d~~~P~~~Y  125 (286)
T PF04321_consen   47 LEAFKPDVVINCAAYTNVDACEKNPEEAYAINVDATKNLAEACKERGA-RLIHISTDYVFDGDKGGPYTEDDPPNPLNVY  125 (286)
T ss_dssp             HHHH--SEEEE------HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT--EEEEEEEGGGS-SSTSSSB-TTS----SSHH
T ss_pred             HHHhCCCeEeccceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHcCC-cEEEeeccEEEcCCcccccccCCCCCCCCHH
Confidence            86  4899999998754322  24455689999999999999999986 89999998664322     234456778889


Q ss_pred             HHHHHHHHHHHHHCCCCEEEEecCcccCCCcc-ccc------ccceeeccCCcccCCCCCHHHHHHHHHHHHhCCCC--c
Q 016901          232 LLWKRKAEEALIASGLPYTIVRPGGMERPTDA-YKE------THNITLSQEDTLFGGQVSNLQVAELLACMAKNRSL--S  302 (380)
Q Consensus       232 ~~sK~~~E~~l~~~g~~~~ivRpg~v~gp~~~-~~~------~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~~~--~  302 (380)
                      |.+|+.+|+.+++..-++.|+|++++||+... +..      .....+......+..+++++|+|+++..++++...  .
T Consensus       126 G~~K~~~E~~v~~~~~~~~IlR~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA~~i~~l~~~~~~~~~  205 (286)
T PF04321_consen  126 GRSKLEGEQAVRAACPNALILRTSWVYGPSGRNFLRWLLRRLRQGEPIKLFDDQYRSPTYVDDLARVILELIEKNLSGAS  205 (286)
T ss_dssp             HHHHHHHHHHHHHH-SSEEEEEE-SEESSSSSSHHHHHHHHHHCTSEEEEESSCEE--EEHHHHHHHHHHHHHHHHH-GG
T ss_pred             HHHHHHHHHHHHHhcCCEEEEecceecccCCCchhhhHHHHHhcCCeeEeeCCceeCCEEHHHHHHHHHHHHHhcccccc
Confidence            99999999999986669999999999999432 110      01111222233345789999999999999987541  2


Q ss_pred             cCcEEEEecCCCCCcchHHHHHHhcCCCCC
Q 016901          303 YCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (380)
Q Consensus       303 ~~~~~ni~~~~~~s~~~~~e~~~~~~~~~~  332 (380)
                      ..++||+++++..|..|+++.+.+.++...
T Consensus       206 ~~Giyh~~~~~~~S~~e~~~~i~~~~~~~~  235 (286)
T PF04321_consen  206 PWGIYHLSGPERVSRYEFAEAIAKILGLDP  235 (286)
T ss_dssp             G-EEEE---BS-EEHHHHHHHHHHHHTHCT
T ss_pred             cceeEEEecCcccCHHHHHHHHHHHhCCCC
Confidence            469999999999999999999999998766

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.93  E-value=1.4e-25  Score=206.03  Aligned_cols=226  Identities=16%  Similarity=0.145  Sum_probs=162.8

Q ss_pred             EEEEcCCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCce----EEEEcCCCChhcH
Q 016901           83 AFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML----ELVECDLEKRVQI  157 (380)
Q Consensus        83 vlVtGatG~iG~~lv~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v----~~~~~Dl~d~~~~  157 (380)
                      ||||||+|.||+.|+++|++.+ .++++++|++.++..+..++....-           ..++    ..+.+|++|.+.+
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~-----------~~~v~~~~~~vigDvrd~~~l   69 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFP-----------DPKVRFEIVPVIGDVRDKERL   69 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC-------------TTCEEEEE--CTSCCHHHHH
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhccc-----------ccCcccccCceeecccCHHHH
Confidence            7999999999999999999998 6899999999999888877642110           0233    4568999999999


Q ss_pred             HHHhc--CCCEEEEccccCc--cccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCCchhhhchhhHHHH
Q 016901          158 EPALG--NASVVICCIGASE--KEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLL  233 (380)
Q Consensus       158 ~~a~~--~~d~Vi~~Ag~~~--~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~~Y~~  233 (380)
                      ..+++  ++|+|||.|+.-.  ....++.+..++|+.||+|++++|.++++++||++||--+.         +|.+-||+
T Consensus        70 ~~~~~~~~pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKAv---------~PtnvmGa  140 (293)
T PF02719_consen   70 NRIFEEYKPDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKAV---------NPTNVMGA  140 (293)
T ss_dssp             HHHTT--T-SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGCS---------S--SHHHH
T ss_pred             HHHHhhcCCCEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccccC---------CCCcHHHH
Confidence            99998  8999999998542  22234566689999999999999999999999999996542         45567999


Q ss_pred             HHHHHHHHHHH-------CCCCEEEEecCcccCCCcccc--------cccceeeccCCcccCCCCCHHHHHHHHHHHHhC
Q 016901          234 WKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK--------ETHNITLSQEDTLFGGQVSNLQVAELLACMAKN  298 (380)
Q Consensus       234 sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~--------~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~  298 (380)
                      ||+.+|.++..       .+.++++||.|+|.|-.++..        ..+.+.+.. ..+..-++++++.++.++.++..
T Consensus       141 tKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GSVip~F~~Qi~~g~PlTvT~-p~mtRffmti~EAv~Lvl~a~~~  219 (293)
T PF02719_consen  141 TKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRGSVIPLFKKQIKNGGPLTVTD-PDMTRFFMTIEEAVQLVLQAAAL  219 (293)
T ss_dssp             HHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTTSCHHHHHHHHHTTSSEEECE-TT-EEEEE-HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCCCcHHHHHHHHHHcCCcceeCC-CCcEEEEecHHHHHHHHHHHHhh
Confidence            99999999974       246899999999998765431        122232222 22333479999999999999987


Q ss_pred             CCCccCcEEEEecCCCCCcchHHHHHHhcCCCC
Q 016901          299 RSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (380)
Q Consensus       299 ~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~  331 (380)
                      ...  |++|-+-.|+..++.|+++.+.++.|..
T Consensus       220 ~~~--geifvl~mg~~v~I~dlA~~~i~~~g~~  250 (293)
T PF02719_consen  220 AKG--GEIFVLDMGEPVKILDLAEAMIELSGLE  250 (293)
T ss_dssp             --T--TEEEEE---TCEECCCHHHHHHHHTT-E
T ss_pred             CCC--CcEEEecCCCCcCHHHHHHHHHhhcccc
Confidence            553  8899999999999999999999998854

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.93  E-value=1.9e-25  Score=199.05  Aligned_cols=234  Identities=15%  Similarity=0.147  Sum_probs=179.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHC--CCeEEEEeCCc--hhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           81 NLAFVAGATGKVGSRTVRELLKL--GFRVRAGVRSV--QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~--G~~V~~l~R~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ++++||||+||||++.+..+..+  .++.+.++.=.  +.+..+.               .-.+.++..++.+|+.+...
T Consensus         7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~---------------~~~n~p~ykfv~~di~~~~~   71 (331)
T KOG0747|consen    7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLE---------------PVRNSPNYKFVEGDIADADL   71 (331)
T ss_pred             ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhh---------------hhccCCCceEeeccccchHH
Confidence            78999999999999999999987  36666654310  0111111               11234899999999999888


Q ss_pred             HHHHhc--CCCEEEEccccCccc--cCCCCCcchhhHHHHHHHHHHHHHcC-CCEEEEEccCCCCCCCC------chhhh
Q 016901          157 IEPALG--NASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAK-VNHFIMVSSLGTNKFGF------PAAIL  225 (380)
Q Consensus       157 ~~~a~~--~~d~Vi~~Ag~~~~~--~~~~~~~~~~nv~g~~~ll~a~~~~~-v~r~V~~SS~~~~~~~~------~~~~~  225 (380)
                      +.-.+.  .+|.|||.|+....+  ..+.......|+.++..|+++++..| +++|||+||-.++...+      +....
T Consensus        72 ~~~~~~~~~id~vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~E~s~~  151 (331)
T KOG0747|consen   72 VLYLFETEEIDTVIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVGEASLL  151 (331)
T ss_pred             HHhhhccCchhhhhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccccccccccC
Confidence            877774  699999999865432  23445557889999999999999885 89999999987743221      23456


Q ss_pred             chhhHHHHHHHHHHHHHH----HCCCCEEEEecCcccCCCcccccc-----------cceeeccCCcccCCCCCHHHHHH
Q 016901          226 NLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKET-----------HNITLSQEDTLFGGQVSNLQVAE  290 (380)
Q Consensus       226 ~~~~~Y~~sK~~~E~~l~----~~g~~~~ivRpg~v~gp~~~~~~~-----------~~~~~~~~~~~~~~~i~~~DvA~  290 (380)
                      +|.++|+++|+++|..++    ++|++++++|.++||||++.....           ....+.........|+|++|+++
T Consensus       152 nPtnpyAasKaAaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~e  231 (331)
T KOG0747|consen  152 NPTNPYAASKAAAEMLVRSYGRSYGLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSE  231 (331)
T ss_pred             CCCCchHHHHHHHHHHHHHHhhccCCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHH
Confidence            788899999999999987    489999999999999998743211           11223333444557899999999


Q ss_pred             HHHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCCCC
Q 016901          291 LLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (380)
Q Consensus       291 ~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~  331 (380)
                      ++-.+++....  |++|||+.....+..|+++.+.++.+++
T Consensus       232 a~~~v~~Kg~~--geIYNIgtd~e~~~~~l~k~i~eli~~~  270 (331)
T KOG0747|consen  232 AFKAVLEKGEL--GEIYNIGTDDEMRVIDLAKDICELFEKR  270 (331)
T ss_pred             HHHHHHhcCCc--cceeeccCcchhhHHHHHHHHHHHHHHh
Confidence            99999998554  9999999999999999999998887763

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.93  E-value=2.9e-24  Score=209.04  Aligned_cols=232  Identities=16%  Similarity=0.186  Sum_probs=189.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ..+|+||||||+|-||+.+++++++.+ .+++++.|++.+...+..++....           +..++.++-||+.|.+.
T Consensus       248 ~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~-----------~~~~~~~~igdVrD~~~  316 (588)
T COG1086         248 LTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKF-----------PELKLRFYIGDVRDRDR  316 (588)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhC-----------CCcceEEEecccccHHH
Confidence            478999999999999999999999998 689999999999888877765421           12678899999999999


Q ss_pred             HHHHhcC--CCEEEEccccC--ccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCCchhhhchhhHHH
Q 016901          157 IEPALGN--ASVVICCIGAS--EKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVL  232 (380)
Q Consensus       157 ~~~a~~~--~d~Vi~~Ag~~--~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~~Y~  232 (380)
                      +..++.+  +|+|||.|+.-  +--..++.+.+++|+.||.|++++|.+.|+++||.+||-.+         .+|.+.||
T Consensus       317 ~~~~~~~~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDKA---------V~PtNvmG  387 (588)
T COG1086         317 VERAMEGHKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKA---------VNPTNVMG  387 (588)
T ss_pred             HHHHHhcCCCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCcc---------cCCchHhh
Confidence            9999998  99999999843  23334667779999999999999999999999999999654         24556799


Q ss_pred             HHHHHHHHHHHH-----C--CCCEEEEecCcccCCCcccc--------cccceeeccCCcccCCCCCHHHHHHHHHHHHh
Q 016901          233 LWKRKAEEALIA-----S--GLPYTIVRPGGMERPTDAYK--------ETHNITLSQEDTLFGGQVSNLQVAELLACMAK  297 (380)
Q Consensus       233 ~sK~~~E~~l~~-----~--g~~~~ivRpg~v~gp~~~~~--------~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~  297 (380)
                      +||+.+|.++.+     .  +.+++++|.|||.|-.++.-        ..+.+.+. +..+..-|++..|.++.++.+..
T Consensus       388 aTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGSViPlFk~QI~~GgplTvT-dp~mtRyfMTI~EAv~LVlqA~a  466 (588)
T COG1086         388 ATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGSVIPLFKKQIAEGGPLTVT-DPDMTRFFMTIPEAVQLVLQAGA  466 (588)
T ss_pred             HHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCCCCCHHHHHHHHHcCCCcccc-CCCceeEEEEHHHHHHHHHHHHh
Confidence            999999999874     2  47899999999999876431        12222222 22333457999999999999988


Q ss_pred             CCCCccCcEEEEecCCCCCcchHHHHHHhcCCCCC
Q 016901          298 NRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (380)
Q Consensus       298 ~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~~  332 (380)
                      ...  +|++|-+-.|++.++.|+++.+-++.|+.+
T Consensus       467 ~~~--gGeifvldMGepvkI~dLAk~mi~l~g~~~  499 (588)
T COG1086         467 IAK--GGEIFVLDMGEPVKIIDLAKAMIELAGQTP  499 (588)
T ss_pred             hcC--CCcEEEEcCCCCeEHHHHHHHHHHHhCCCC
Confidence            744  499999999999999999999999988433

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.92  E-value=5.8e-24  Score=195.13  Aligned_cols=224  Identities=17%  Similarity=0.145  Sum_probs=159.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCch-hHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ-RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~  155 (380)
                      ++++++++||||+||||++++++|+++|++|++++|+.+ ..+.+...++..             ..++.++.+|++|++
T Consensus         3 ~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~-------------~~~~~~~~~D~~~~~   69 (248)
T PRK07806          3 DLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAA-------------GGRASAVGADLTDEE   69 (248)
T ss_pred             CCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhc-------------CCceEEEEcCCCCHH
Confidence            346789999999999999999999999999999999764 333333333221             146788999999998


Q ss_pred             cHHHHhc-------CCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcC--CCEEEEEccCCCCCCCCchhhhc
Q 016901          156 QIEPALG-------NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK--VNHFIMVSSLGTNKFGFPAAILN  226 (380)
Q Consensus       156 ~~~~a~~-------~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~--v~r~V~~SS~~~~~~~~~~~~~~  226 (380)
                      ++.++++       ++|+||||||.......++...+++|+.++.++++++.+.-  .+++|++||.+...... .....
T Consensus        70 ~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~-~~~~~  148 (248)
T PRK07806         70 SVAALMDTAREEFGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPT-VKTMP  148 (248)
T ss_pred             HHHHHHHHHHHhCCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCcc-ccCCc
Confidence            8877663       68999999986533333456678999999999999998642  35899999965421111 01112


Q ss_pred             hhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcccccccce--eeccCCcccCCCCCHHHHHHHHHHHHh
Q 016901          227 LFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNI--TLSQEDTLFGGQVSNLQVAELLACMAK  297 (380)
Q Consensus       227 ~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~~~~~--~~~~~~~~~~~~i~~~DvA~~i~~~l~  297 (380)
                      .+..|+.+|.++|.+++.       .|+++++++||.+.+|..........  .........+.+++++|+|++++.+++
T Consensus       149 ~~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~  228 (248)
T PRK07806        149 EYEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRLNPGAIEARREAAGKLYTVSEFAAEVARAVT  228 (248)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccCCHHHHHHHHhhhcccCCHHHHHHHHHHHhh
Confidence            245799999999988763       68999999999887763211000000  000111112467999999999999998


Q ss_pred             CCCCccCcEEEEecCCCC
Q 016901          298 NRSLSYCKVVEVIAETTA  315 (380)
Q Consensus       298 ~~~~~~~~~~ni~~~~~~  315 (380)
                      +.. ..+++|++++++..
T Consensus       229 ~~~-~~g~~~~i~~~~~~  245 (248)
T PRK07806        229 APV-PSGHIEYVGGADYF  245 (248)
T ss_pred             ccc-cCccEEEecCccce
Confidence            654 56899999998754

>PLN02778 3,5-epimerase/4-reductase

Probab=99.92  E-value=1.7e-24  Score=204.33  Aligned_cols=211  Identities=12%  Similarity=0.006  Sum_probs=148.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ..|+||||||+||||++|+++|+++|++|++..+                                     |+.|.+.+.
T Consensus         8 ~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~-------------------------------------~~~~~~~v~   50 (298)
T PLN02778          8 ATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSG-------------------------------------RLENRASLE   50 (298)
T ss_pred             CCCeEEEECCCCHHHHHHHHHHHhCCCEEEEecC-------------------------------------ccCCHHHHH
Confidence            4478999999999999999999999999975432                                     223333344


Q ss_pred             HHhc--CCCEEEEccccCccc-----cCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCC-----------C
Q 016901          159 PALG--NASVVICCIGASEKE-----VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----------F  220 (380)
Q Consensus       159 ~a~~--~~d~Vi~~Ag~~~~~-----~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~-----------~  220 (380)
                      ..+.  ++|+|||+||.....     ..++...+++|+.|+.+++++|++.++++ +++||..++.++           .
T Consensus        51 ~~l~~~~~D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~~-v~~sS~~vy~~~~~~p~~~~~~~~  129 (298)
T PLN02778         51 ADIDAVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERGLVL-TNYATGCIFEYDDAHPLGSGIGFK  129 (298)
T ss_pred             HHHHhcCCCEEEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCE-EEEecceEeCCCCCCCcccCCCCC
Confidence            4443  689999999965321     12344568899999999999999999865 555654443221           1


Q ss_pred             chh-hhchhhHHHHHHHHHHHHHHHCCCCEEEEecCcccCCCccccccc-ceeeccCC--cccCCCCCHHHHHHHHHHHH
Q 016901          221 PAA-ILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETH-NITLSQED--TLFGGQVSNLQVAELLACMA  296 (380)
Q Consensus       221 ~~~-~~~~~~~Y~~sK~~~E~~l~~~g~~~~ivRpg~v~gp~~~~~~~~-~~~~~~~~--~~~~~~i~~~DvA~~i~~~l  296 (380)
                      ++. +..+.+.|+.+|+++|.+++.+. +..++|++..++++....... ...+....  ....++++++|++++++.++
T Consensus       130 Ee~~p~~~~s~Yg~sK~~~E~~~~~y~-~~~~lr~~~~~~~~~~~~~~fi~~~~~~~~~~~~~~s~~yv~D~v~al~~~l  208 (298)
T PLN02778        130 EEDTPNFTGSFYSKTKAMVEELLKNYE-NVCTLRVRMPISSDLSNPRNFITKITRYEKVVNIPNSMTILDELLPISIEMA  208 (298)
T ss_pred             cCCCCCCCCCchHHHHHHHHHHHHHhh-ccEEeeecccCCcccccHHHHHHHHHcCCCeeEcCCCCEEHHHHHHHHHHHH
Confidence            122 22234679999999999998754 677899988777642211000 00011111  11235899999999999998


Q ss_pred             hCCCCccCcEEEEecCCCCCcchHHHHHHhcCCCC
Q 016901          297 KNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (380)
Q Consensus       297 ~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~  331 (380)
                      .+..   +++||+++++..|+.|++++++++++..
T Consensus       209 ~~~~---~g~yNigs~~~iS~~el~~~i~~~~~~~  240 (298)
T PLN02778        209 KRNL---TGIYNFTNPGVVSHNEILEMYRDYIDPS  240 (298)
T ss_pred             hCCC---CCeEEeCCCCcccHHHHHHHHHHHhCCC
Confidence            7643   4699999999999999999999999853

>PRK12320 hypothetical protein; Provisional

Probab=99.92  E-value=2.8e-24  Score=219.79  Aligned_cols=199  Identities=18%  Similarity=0.180  Sum_probs=151.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      |+||||||+||||++|+++|+++|++|++++|.+....                      ..+++++.+|++|+. +.++
T Consensus         1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~~----------------------~~~ve~v~~Dl~d~~-l~~a   57 (699)
T PRK12320          1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDAL----------------------DPRVDYVCASLRNPV-LQEL   57 (699)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhcc----------------------cCCceEEEccCCCHH-HHHH
Confidence            47999999999999999999999999999998753210                      146889999999985 7888


Q ss_pred             hcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCCchhhhchhhHHHHHHHHHHH
Q 016901          161 LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEE  240 (380)
Q Consensus       161 ~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~  240 (380)
                      +.++|+|||+|+....      ....+|+.|+.|++++|++.|+ ++||+||...    .+.       .|.    .+|.
T Consensus        58 l~~~D~VIHLAa~~~~------~~~~vNv~Gt~nLleAA~~~Gv-RiV~~SS~~G----~~~-------~~~----~aE~  115 (699)
T PRK12320         58 AGEADAVIHLAPVDTS------APGGVGITGLAHVANAAARAGA-RLLFVSQAAG----RPE-------LYR----QAET  115 (699)
T ss_pred             hcCCCEEEEcCccCcc------chhhHHHHHHHHHHHHHHHcCC-eEEEEECCCC----CCc-------ccc----HHHH
Confidence            8999999999985321      1236899999999999999997 7999998632    111       122    4788


Q ss_pred             HHHHCCCCEEEEecCcccCCCcccccccceeeccCCcccCC---CCCHHHHHHHHHHHHhCCCCccCcEEEEecCCCCCc
Q 016901          241 ALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGG---QVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPL  317 (380)
Q Consensus       241 ~l~~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~---~i~~~DvA~~i~~~l~~~~~~~~~~~ni~~~~~~s~  317 (380)
                      ++..++++++++|++++|||+........+.........+.   .+|++|++++++.+++.+.   +++|||++++..|+
T Consensus       116 ll~~~~~p~~ILR~~nVYGp~~~~~~~r~I~~~l~~~~~~~pI~vIyVdDvv~alv~al~~~~---~GiyNIG~~~~~Si  192 (699)
T PRK12320        116 LVSTGWAPSLVIRIAPPVGRQLDWMVCRTVATLLRSKVSARPIRVLHLDDLVRFLVLALNTDR---NGVVDLATPDTTNV  192 (699)
T ss_pred             HHHhcCCCEEEEeCceecCCCCcccHhHHHHHHHHHHHcCCceEEEEHHHHHHHHHHHHhCCC---CCEEEEeCCCeeEH
Confidence            88888899999999999999653211111100000000112   3699999999999997643   45999999999999


Q ss_pred             chHHHHHHhc
Q 016901          318 TPMEELLAKI  327 (380)
Q Consensus       318 ~~~~e~~~~~  327 (380)
                      .++.+++...
T Consensus       193 ~el~~~i~~~  202 (699)
T PRK12320        193 VTAWRLLRSV  202 (699)
T ss_pred             HHHHHHHHHh
Confidence            9998888776

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.92  E-value=4.9e-25  Score=202.86  Aligned_cols=171  Identities=25%  Similarity=0.276  Sum_probs=107.5

Q ss_pred             EEcCCChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHH---HHhhhhcccccccCCCCCCceEEEEcCCCCh-----
Q 016901           85 VAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQS---VKQMKLDGELANKGIQPVEMLELVECDLEKR-----  154 (380)
Q Consensus        85 VtGatG~iG~~lv~~Ll~~G~--~V~~l~R~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~-----  154 (380)
                      |||||||+|++|+++|++++.  +|+|++|..+......+.   +.+.++.....   .+...+++++.||++++     
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~---~~~~~ri~~v~GDl~~~~lGL~   77 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLD---KEALSRIEVVEGDLSQPNLGLS   77 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH----HHHTTTEEEEE--TTSGGGG--
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhh---hhhhccEEEEeccccccccCCC
Confidence            799999999999999999986  999999987654333333   22222211000   01137999999999975     


Q ss_pred             -hcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCCc--------h---
Q 016901          155 -VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFP--------A---  222 (380)
Q Consensus       155 -~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~--------~---  222 (380)
                       +.+.++.+.+|+|||||+..... .++...+++|+.|++++++.|.+.+.++|+|+||+.+......        .   
T Consensus        78 ~~~~~~L~~~v~~IiH~Aa~v~~~-~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~~~~~~~~~~~~~~~~~~  156 (249)
T PF07993_consen   78 DEDYQELAEEVDVIIHCAASVNFN-APYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVAGSRPGTIEEKVYPEEED  156 (249)
T ss_dssp             HHHHHHHHHH--EEEE--SS-SBS--S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGTTS-TTT--SSS-HHH--
T ss_pred             hHHhhccccccceeeecchhhhhc-ccchhhhhhHHHHHHHHHHHHHhccCcceEEeccccccCCCCCcccccccccccc
Confidence             46777778999999999977554 3556678999999999999999777779999999433221110        0   


Q ss_pred             ---hhhchhhHHHHHHHHHHHHHHH----CCCCEEEEecCcccC
Q 016901          223 ---AILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMER  259 (380)
Q Consensus       223 ---~~~~~~~~Y~~sK~~~E~~l~~----~g~~~~ivRpg~v~g  259 (380)
                         .......+|..||+.+|+++++    .|++++|+|||.|+|
T Consensus       157 ~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g  200 (249)
T PF07993_consen  157 DLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVG  200 (249)
T ss_dssp             EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-
T ss_pred             cchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccc
Confidence               1123345799999999999974    399999999999998

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.92  E-value=1.5e-24  Score=203.53  Aligned_cols=222  Identities=19%  Similarity=0.107  Sum_probs=152.4

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHHhc
Q 016901           83 AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALG  162 (380)
Q Consensus        83 vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a~~  162 (380)
                      |||||||||||+++++.|+++|++|++++|++.+.....                     ...  ..|+.. ..+.+++.
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---------------------~~~--~~~~~~-~~~~~~~~   56 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK---------------------WEG--YKPWAP-LAESEALE   56 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc---------------------cee--eecccc-cchhhhcC
Confidence            699999999999999999999999999999876532210                     001  112222 44567788


Q ss_pred             CCCEEEEccccCccc--cC--CCCCcchhhHHHHHHHHHHHHHcCCC--EEEEEccCCCCCCC-----CchhhhchhhHH
Q 016901          163 NASVVICCIGASEKE--VF--DITGPYRIDFQATKNLVDAATIAKVN--HFIMVSSLGTNKFG-----FPAAILNLFWGV  231 (380)
Q Consensus       163 ~~d~Vi~~Ag~~~~~--~~--~~~~~~~~nv~g~~~ll~a~~~~~v~--r~V~~SS~~~~~~~-----~~~~~~~~~~~Y  231 (380)
                      ++|+|||+||.....  +.  .....+++|+.++++++++|++.+++  +||+.|+++++...     .+..+..+...|
T Consensus        57 ~~D~Vvh~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~~~~  136 (292)
T TIGR01777        57 GADAVINLAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEEDSPAGDDFL  136 (292)
T ss_pred             CCCEEEECCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCcccCCCCCChH
Confidence            999999999864321  11  11234678999999999999999864  56666665443211     111112222234


Q ss_pred             HHHHHHHHHHHH---HCCCCEEEEecCcccCCCcccccc----c----ceeeccCCcccCCCCCHHHHHHHHHHHHhCCC
Q 016901          232 LLWKRKAEEALI---ASGLPYTIVRPGGMERPTDAYKET----H----NITLSQEDTLFGGQVSNLQVAELLACMAKNRS  300 (380)
Q Consensus       232 ~~sK~~~E~~l~---~~g~~~~ivRpg~v~gp~~~~~~~----~----~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~~  300 (380)
                      ...+...|..+.   +.+++++++||+++|||.+.....    .    ...+ .......++||++|+|+++..+++++.
T Consensus       137 ~~~~~~~e~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~i~v~Dva~~i~~~l~~~~  215 (292)
T TIGR01777       137 AELCRDWEEAAQAAEDLGTRVVLLRTGIVLGPKGGALAKMLPPFRLGLGGPL-GSGRQWFSWIHIEDLVQLILFALENAS  215 (292)
T ss_pred             HHHHHHHHHHhhhchhcCCceEEEeeeeEECCCcchhHHHHHHHhcCccccc-CCCCcccccEeHHHHHHHHHHHhcCcc
Confidence            555655665543   468999999999999996421110    0    0011 122333478999999999999998765


Q ss_pred             CccCcEEEEecCCCCCcchHHHHHHhcCCCC
Q 016901          301 LSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (380)
Q Consensus       301 ~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~  331 (380)
                      .  .++||+++++..++.|+++.+.+..+..
T Consensus       216 ~--~g~~~~~~~~~~s~~di~~~i~~~~g~~  244 (292)
T TIGR01777       216 I--SGPVNATAPEPVRNKEFAKALARALHRP  244 (292)
T ss_pred             c--CCceEecCCCccCHHHHHHHHHHHhCCC
Confidence            3  5689999999999999999999998853

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1e-23  Score=196.79  Aligned_cols=220  Identities=18%  Similarity=0.162  Sum_probs=155.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      .+++|||||+||||++++++|+++|++|+++.|+++....+....                ..++.++.+|++|.+++.+
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~----------------~~~~~~~~~D~~~~~~~~~   65 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY----------------GDRLWVLQLDVTDSAAVRA   65 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----------------cCceEEEEccCCCHHHHHH
Confidence            368999999999999999999999999999999987665543311                1468899999999988877


Q ss_pred             Hh-------cCCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCCCCch
Q 016901          160 AL-------GNASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGFPA  222 (380)
Q Consensus       160 a~-------~~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~~~~~  222 (380)
                      ++       .++|+||||||.......      ++...+++|+.|+.++++++    ++.+.++||++||.+....    
T Consensus        66 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~----  141 (276)
T PRK06482         66 VVDRAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIA----  141 (276)
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccC----
Confidence            65       358999999996532211      12334679999999999997    5567789999999765321    


Q ss_pred             hhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcc---cCCCccccccc----cee---e--ccCCcccCCCC
Q 016901          223 AILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGM---ERPTDAYKETH----NIT---L--SQEDTLFGGQV  283 (380)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v---~gp~~~~~~~~----~~~---~--~~~~~~~~~~i  283 (380)
                        ......|+.+|++.|.+++       .+|++++++|||.+   +|++.......    ...   +  ......+.-+.
T Consensus       142 --~~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (276)
T PRK06482        142 --YPGFSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGSFAIPG  219 (276)
T ss_pred             --CCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhccCCCCC
Confidence              1234579999999997765       26999999999998   44322110000    000   0  00000011236


Q ss_pred             CHHHHHHHHHHHHhCCCCccCcEEEEecCCCCCcchHHHH
Q 016901          284 SNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEEL  323 (380)
Q Consensus       284 ~~~DvA~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~  323 (380)
                      +++|++++++.++..+..  +..||+++++..++.++...
T Consensus       220 d~~~~~~a~~~~~~~~~~--~~~~~~g~~~~~~~~~~~~~  257 (276)
T PRK06482        220 DPQKMVQAMIASADQTPA--PRRLTLGSDAYASIRAALSE  257 (276)
T ss_pred             CHHHHHHHHHHHHcCCCC--CeEEecChHHHHHHHHHHHH
Confidence            899999999999986543  56799999986655544443

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.92  E-value=1.1e-23  Score=193.19  Aligned_cols=220  Identities=15%  Similarity=0.124  Sum_probs=159.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ++++++|+||||+|+||.+++++|+++|++|++++|+.++.....+.+...+             .++.++.+|++|.++
T Consensus         3 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~-------------~~~~~~~~Dl~~~~~   69 (251)
T PRK12826          3 DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAG-------------GKARARQVDVRDRAA   69 (251)
T ss_pred             CCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------------CeEEEEECCCCCHHH
Confidence            4567899999999999999999999999999999999876665554443211             458899999999998


Q ss_pred             HHHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCCC
Q 016901          157 IEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       157 ~~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~~  219 (380)
                      +.++++       .+|+||||+|......      .++...+++|+.++.++++++.    +.+.++||++||.+.....
T Consensus        70 ~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~  149 (251)
T PRK12826         70 LKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVG  149 (251)
T ss_pred             HHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccC
Confidence            888774       6899999998654311      1223347789999999988773    4567899999997664111


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccc-eeeccCCcccCCCCCHHHHHHH
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHN-ITLSQEDTLFGGQVSNLQVAEL  291 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~-~~~~~~~~~~~~~i~~~DvA~~  291 (380)
                           ......|+.+|.+++.+++       ..|++++++|||+++||......... ............+++++|+|++
T Consensus       150 -----~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  224 (251)
T PRK12826        150 -----YPGLAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQWAEAIAAAIPLGRLGEPEDIAAA  224 (251)
T ss_pred             -----CCCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchHHHHHHHhcCCCCCCcCHHHHHHH
Confidence                 1233469999999887765       25899999999999998542211111 0011111122357999999999


Q ss_pred             HHHHHhCCC-CccCcEEEEecCCC
Q 016901          292 LACMAKNRS-LSYCKVVEVIAETT  314 (380)
Q Consensus       292 i~~~l~~~~-~~~~~~~ni~~~~~  314 (380)
                      +..++.... ...+++|++.++..
T Consensus       225 ~~~l~~~~~~~~~g~~~~~~~g~~  248 (251)
T PRK12826        225 VLFLASDEARYITGQTLPVDGGAT  248 (251)
T ss_pred             HHHHhCccccCcCCcEEEECCCcc
Confidence            999887643 23589999987764

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.92  E-value=2e-24  Score=201.56  Aligned_cols=178  Identities=23%  Similarity=0.225  Sum_probs=138.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCCh-----
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR-----  154 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~-----  154 (380)
                      ++||+||||||+|++|+.+|+.+- .+|+|++|..+....+.+..+.+.....   +...+..+++++.||+..+     
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~---~~e~~~~ri~vv~gDl~e~~lGL~   77 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRH---WDELSADRVEVVAGDLAEPDLGLS   77 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhh---hhhhhcceEEEEecccccccCCCC
Confidence            479999999999999999999885 5999999987754444444443332111   2233458999999999953     


Q ss_pred             -hcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCCch-----------
Q 016901          155 -VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPA-----------  222 (380)
Q Consensus       155 -~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~~-----------  222 (380)
                       ..++++.+.+|.||||++.+ ++..++.+....||.||..+++.|...+.|.++|+||+++.......           
T Consensus        78 ~~~~~~La~~vD~I~H~gA~V-n~v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~  156 (382)
T COG3320          78 ERTWQELAENVDLIIHNAALV-NHVFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEISP  156 (382)
T ss_pred             HHHHHHHhhhcceEEecchhh-cccCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCccccccccc
Confidence             56778888999999998866 34566777789999999999999999888999999998874432111           


Q ss_pred             ---hhhchhhHHHHHHHHHHHHHHH---CCCCEEEEecCcccCCCc
Q 016901          223 ---AILNLFWGVLLWKRKAEEALIA---SGLPYTIVRPGGMERPTD  262 (380)
Q Consensus       223 ---~~~~~~~~Y~~sK~~~E~~l~~---~g~~~~ivRpg~v~gp~~  262 (380)
                         .......+|++|||.+|.++++   .|++++|+|||+|.|+..
T Consensus       157 ~~~~~~~~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~gds~  202 (382)
T COG3320         157 TRNVGQGLAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYITGDSR  202 (382)
T ss_pred             cccccCccCCCcchhHHHHHHHHHHHhhcCCCeEEEecCeeeccCc
Confidence               1122346899999999999984   689999999999998754

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.92  E-value=9e-24  Score=195.30  Aligned_cols=217  Identities=14%  Similarity=0.097  Sum_probs=157.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      ++++++|||||+|+||+++++.|+++|++|+++.|++++..+..+.+...+             .++.++++|++|.+++
T Consensus         5 ~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~Dl~~~~~~   71 (262)
T PRK13394          5 LNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAG-------------GKAIGVAMDVTNEDAV   71 (262)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcC-------------ceEEEEECCCCCHHHH
Confidence            457899999999999999999999999999999999887766665554321             4688899999999888


Q ss_pred             HHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHH----HHHHHHHH-HHcCCCEEEEEccCCCCCCC
Q 016901          158 EPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQA----TKNLVDAA-TIAKVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g----~~~ll~a~-~~~~v~r~V~~SS~~~~~~~  219 (380)
                      ++++.       ++|+||||||......      ..+...+++|+.+    +.++++++ ++.+.++||++||.......
T Consensus        72 ~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~  151 (262)
T PRK13394         72 NAGIDKVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEAS  151 (262)
T ss_pred             HHHHHHHHHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCC
Confidence            77664       4899999998653211      1223446789999    66677777 66678899999997553211


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccc-ccc--ce---------eeccCCcccC
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-ETH--NI---------TLSQEDTLFG  280 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~-~~~--~~---------~~~~~~~~~~  280 (380)
                            .....|+.+|...+.+++       ..++++++||||.+++|..... ...  ..         .+.......+
T Consensus       152 ------~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (262)
T PRK13394        152 ------PLKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDG  225 (262)
T ss_pred             ------CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhcCCCCC
Confidence                  223469999999887765       2689999999999999853111 000  00         0001122234


Q ss_pred             CCCCHHHHHHHHHHHHhCCC-CccCcEEEEecCC
Q 016901          281 GQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       281 ~~i~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      .+++++|++++++.++.... ...++.|++.++.
T Consensus       226 ~~~~~~dva~a~~~l~~~~~~~~~g~~~~~~~g~  259 (262)
T PRK13394        226 VFTTVEDVAQTVLFLSSFPSAALTGQSFVVSHGW  259 (262)
T ss_pred             CCCCHHHHHHHHHHHcCccccCCcCCEEeeCCce
Confidence            68999999999999997643 2347888888764

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=99.91  E-value=1.5e-22  Score=193.12  Aligned_cols=235  Identities=41%  Similarity=0.528  Sum_probs=164.4

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh
Q 016901           76 DSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (380)
Q Consensus        76 ~~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~  155 (380)
                      .+.+.++|+|+||||.+|+.+++.|+++|+.|++++|+.++...+....              ........+..|.....
T Consensus        75 ~~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~--------------~~d~~~~~v~~~~~~~~  140 (411)
T KOG1203|consen   75 NSKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVF--------------FVDLGLQNVEADVVTAI  140 (411)
T ss_pred             CCCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhccc--------------ccccccceeeecccccc
Confidence            4567789999999999999999999999999999999998877764300              01134455555554433


Q ss_pred             c-HHHHhc----CCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCCchhhhchhhH
Q 016901          156 Q-IEPALG----NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWG  230 (380)
Q Consensus       156 ~-~~~a~~----~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~~  230 (380)
                      + +..++.    +..+++-|+|..+... +....+.+++.|++|+++||+..|++|||++|+++......+......+..
T Consensus       141 d~~~~~~~~~~~~~~~v~~~~ggrp~~e-d~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~~~~~~~~~~~~~~~~  219 (411)
T KOG1203|consen  141 DILKKLVEAVPKGVVIVIKGAGGRPEEE-DIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGGTKFNQPPNILLLNGL  219 (411)
T ss_pred             chhhhhhhhccccceeEEecccCCCCcc-cCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecCcccCCCchhhhhhhh
Confidence            3 333332    3567777777554332 334456899999999999999999999999999988665544433333556


Q ss_pred             HHHHHHHHHHHHHHCCCCEEEEecCcccCCCcccccccceeeccCCcccCC--CCCHHHHHHHHHHHHhCCCCccCcEEE
Q 016901          231 VLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGG--QVSNLQVAELLACMAKNRSLSYCKVVE  308 (380)
Q Consensus       231 Y~~sK~~~E~~l~~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~--~i~~~DvA~~i~~~l~~~~~~~~~~~n  308 (380)
                      +..+|..+|+++++.|++++|||||...-+.+.................++  .++..|+|+.++.++.++......+.+
T Consensus       220 ~~~~k~~~e~~~~~Sgl~ytiIR~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~vael~~~all~~~~~~~k~~~  299 (411)
T KOG1203|consen  220 VLKAKLKAEKFLQDSGLPYTIIRPGGLEQDTGGQREVVVDDEKELLTVDGGAYSISRLDVAELVAKALLNEAATFKKVVE  299 (411)
T ss_pred             hhHHHHhHHHHHHhcCCCcEEEeccccccCCCCcceecccCccccccccccceeeehhhHHHHHHHHHhhhhhccceeEE
Confidence            779999999999999999999999998754332111111111111111122  699999999999999998866667777


Q ss_pred             EecCCCCCcchHHHHHH
Q 016901          309 VIAETTAPLTPMEELLA  325 (380)
Q Consensus       309 i~~~~~~s~~~~~e~~~  325 (380)
                      ++.....+-..+..+++
T Consensus       300 ~v~~~~gpg~~~~~l~~  316 (411)
T KOG1203|consen  300 LVLKPEGPGRPYKVLLE  316 (411)
T ss_pred             eecCCCCCCccHHHHHh
Confidence            77766554444444433

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.91  E-value=1.7e-23  Score=211.77  Aligned_cols=256  Identities=14%  Similarity=0.119  Sum_probs=170.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC---eEEEEeCCchhH---HHHHHHHHhhhh-cccccccCCC----CCCceEEE
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGF---RVRAGVRSVQRA---ENLVQSVKQMKL-DGELANKGIQ----PVEMLELV  147 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~---~V~~l~R~~~~~---~~~~~~~~~~~~-~~~~~~~~~~----~~~~v~~~  147 (380)
                      .+++|||||||||||++|++.|++.+.   +|++++|.....   +++.+.+.+..+ .......+..    ...++.++
T Consensus       118 ~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v  197 (605)
T PLN02503        118 RGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPV  197 (605)
T ss_pred             cCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEE
Confidence            678999999999999999999998763   789999975432   222111111000 0000000100    13689999


Q ss_pred             EcCCCCh------hcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcC-CCEEEEEccCCCCCCC-
Q 016901          148 ECDLEKR------VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK-VNHFIMVSSLGTNKFG-  219 (380)
Q Consensus       148 ~~Dl~d~------~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~-v~r~V~~SS~~~~~~~-  219 (380)
                      .||++++      +.++.+.+++|+|||+|+....+ .++...+++|+.|+.+++++|++.+ .++|||+||..++... 
T Consensus       198 ~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~-~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVyG~~~  276 (605)
T PLN02503        198 VGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFD-ERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNGQRQ  276 (605)
T ss_pred             EeeCCCcccCCCHHHHHHHHhcCCEEEECccccccc-cCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceeecCCC
Confidence            9999986      35566678899999999976543 3345568899999999999998864 7899999997552211 


Q ss_pred             -------Cc--h-------------------h------------h----------------------hchhhHHHHHHHH
Q 016901          220 -------FP--A-------------------A------------I----------------------LNLFWGVLLWKRK  237 (380)
Q Consensus       220 -------~~--~-------------------~------------~----------------------~~~~~~Y~~sK~~  237 (380)
                             .+  +                   .            .                      ...-+.|..+|..
T Consensus       277 G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt~TK~l  356 (605)
T PLN02503        277 GRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYVFTKAM  356 (605)
T ss_pred             CeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHHHHHHH
Confidence                   00  0                   0            0                      0011459999999


Q ss_pred             HHHHHHH--CCCCEEEEecCccc----------CCCccccc-------cccee-eccCCcccCCCCCHHHHHHHHHHHHh
Q 016901          238 AEEALIA--SGLPYTIVRPGGME----------RPTDAYKE-------THNIT-LSQEDTLFGGQVSNLQVAELLACMAK  297 (380)
Q Consensus       238 ~E~~l~~--~g~~~~ivRpg~v~----------gp~~~~~~-------~~~~~-~~~~~~~~~~~i~~~DvA~~i~~~l~  297 (380)
                      +|+++++  .+++++|+||+.|.          +++.....       .+.+. +..+.....+.|++|.++++++.++.
T Consensus       357 AE~lV~~~~~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~~~~~~~~DiVPVD~vvna~i~a~a  436 (605)
T PLN02503        357 GEMVINSMRGDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADPNGVLDVVPADMVVNATLAAMA  436 (605)
T ss_pred             HHHHHHHhcCCCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEEEeCCCeeEeEEeecHHHHHHHHHHH
Confidence            9999986  47999999999983          23211110       11111 11222233357999999999998843


Q ss_pred             C-CC--CccCcEEEEecC--CCCCcchHHHHHHhcCCCCCCCc
Q 016901          298 N-RS--LSYCKVVEVIAE--TTAPLTPMEELLAKIPSQRAEPK  335 (380)
Q Consensus       298 ~-~~--~~~~~~~ni~~~--~~~s~~~~~e~~~~~~~~~~~~~  335 (380)
                      . ..  ...+.+||++++  +..++.++.+.+.+.+.+.+..+
T Consensus       437 ~~~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~~~P~~~  479 (605)
T PLN02503        437 KHGGAAKPEINVYQIASSVVNPLVFQDLARLLYEHYKSSPYMD  479 (605)
T ss_pred             hhhcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHhhCCccc
Confidence            2 11  124789999998  77788999999998877665433

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.91  E-value=8.8e-23  Score=186.62  Aligned_cols=219  Identities=18%  Similarity=0.203  Sum_probs=156.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhH-HHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRA-ENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~  155 (380)
                      .+++++||||||||+||++++++|+++|++|+++.|+..+. +.+...+...             ..++.++.+|++|.+
T Consensus         3 ~~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~   69 (249)
T PRK12825          3 SLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEAL-------------GRRAQAVQADVTDKA   69 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc-------------CCceEEEECCcCCHH
Confidence            34567999999999999999999999999998877765432 2232222211             156889999999999


Q ss_pred             cHHHHh-------cCCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCC
Q 016901          156 QIEPAL-------GNASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKF  218 (380)
Q Consensus       156 ~~~~a~-------~~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~  218 (380)
                      ++.+++       +++|+||||||.......      ++...+++|+.++.++++++    ++.+.++||++||.+....
T Consensus        70 ~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~  149 (249)
T PRK12825         70 ALEAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPG  149 (249)
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCC
Confidence            888776       368999999995433221      22344778999999988887    4567889999999876422


Q ss_pred             CCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHH
Q 016901          219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAEL  291 (380)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~  291 (380)
                      .      .....|+.+|...+.+++       ..|++++++|||+++++...................+.+++++|++++
T Consensus       150 ~------~~~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  223 (249)
T PRK12825        150 W------PGRSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEAREAKDAETPLGRSGTPEDIARA  223 (249)
T ss_pred             C------CCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccchhHHhhhccCCCCCCcCHHHHHHH
Confidence            1      233569999998886664       268999999999999985422110000000001223458999999999


Q ss_pred             HHHHHhCCC-CccCcEEEEecCCC
Q 016901          292 LACMAKNRS-LSYCKVVEVIAETT  314 (380)
Q Consensus       292 i~~~l~~~~-~~~~~~~ni~~~~~  314 (380)
                      +..++.+.. ...+++|++.++..
T Consensus       224 ~~~~~~~~~~~~~g~~~~i~~g~~  247 (249)
T PRK12825        224 VAFLCSDASDYITGQVIEVTGGVD  247 (249)
T ss_pred             HHHHhCccccCcCCCEEEeCCCEe
Confidence            999997653 24689999998753

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.91  E-value=8.4e-23  Score=190.58  Aligned_cols=235  Identities=15%  Similarity=0.142  Sum_probs=165.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +.++++|||||+|+||+++++.|+++|++|+++.|+.++.+...+.+....           ...++.++.+|++|++++
T Consensus         5 ~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-----------~~~~~~~~~~Dl~~~~~~   73 (276)
T PRK05875          5 FQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALK-----------GAGAVRYEPADVTDEDQV   73 (276)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcc-----------CCCceEEEEcCCCCHHHH
Confidence            356899999999999999999999999999999999877665554433211           014688999999999888


Q ss_pred             HHHhc-------CCCEEEEccccCcc-------ccCCCCCcchhhHHHHHHHHHHHHH----cCCCEEEEEccCCCCCCC
Q 016901          158 EPALG-------NASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~~-------~~~~~~~~~~~nv~g~~~ll~a~~~----~~v~r~V~~SS~~~~~~~  219 (380)
                      .++++       ++|+||||||....       +..++...+++|+.++.++++++.+    .+.++||++||.......
T Consensus        74 ~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~  153 (276)
T PRK05875         74 ARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTH  153 (276)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCC
Confidence            77764       68999999985421       1112234477899999999887654    344589999997663321


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCccccccc-cee-eccCCcccCCCCCHHHHHH
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETH-NIT-LSQEDTLFGGQVSNLQVAE  290 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~~~-~~~-~~~~~~~~~~~i~~~DvA~  290 (380)
                            .....|+.+|.+.|.+++.       .++++++||||++.++........ ... ..........+++++|+|+
T Consensus       154 ------~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  227 (276)
T PRK05875        154 ------RWFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPELSADYRACTPLPRVGEVEDVAN  227 (276)
T ss_pred             ------CCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHHHHHHHcCCCCCCCcCHHHHHH
Confidence                  2345799999999988763       579999999999987643211100 000 0001112234678999999


Q ss_pred             HHHHHHhCCC-CccCcEEEEecCCCC-CcchHHHHHHhcCC
Q 016901          291 LLACMAKNRS-LSYCKVVEVIAETTA-PLTPMEELLAKIPS  329 (380)
Q Consensus       291 ~i~~~l~~~~-~~~~~~~ni~~~~~~-s~~~~~e~~~~~~~  329 (380)
                      ++..++.++. ...+++|++.++... ...++.+.+..+++
T Consensus       228 ~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~  268 (276)
T PRK05875        228 LAMFLLSDAASWITGQVINVDGGHMLRRGPDFSSMLEPVFG  268 (276)
T ss_pred             HHHHHcCchhcCcCCCEEEECCCeeccCCccHHHHHHHHhh
Confidence            9999998754 235899999998765 22455666555553

>PRK09135 pteridine reductase; Provisional

Probab=99.90  E-value=1.1e-22  Score=186.27  Aligned_cols=221  Identities=13%  Similarity=0.139  Sum_probs=152.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCc-hhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV-QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .++++||||||+||||++++++|+++|++|++++|+. ...+.+...+...            ....+.++.+|++|.++
T Consensus         4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~------------~~~~~~~~~~Dl~~~~~   71 (249)
T PRK09135          4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNAL------------RPGSAAALQADLLDPDA   71 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhh------------cCCceEEEEcCCCCHHH
Confidence            3567999999999999999999999999999999864 3333333322211            01358899999999988


Q ss_pred             HHHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHHHc---CCCEEEEEccCCCCCCCC
Q 016901          157 IEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIA---KVNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       157 ~~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~~~---~v~r~V~~SS~~~~~~~~  220 (380)
                      +.++++       ++|+||||||......      .++...+++|+.|+.++++++...   ...+++++++.....   
T Consensus        72 ~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---  148 (249)
T PRK09135         72 LPELVAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHAER---  148 (249)
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhhcC---
Confidence            887764       5899999998542211      123445779999999999998632   224677776643321   


Q ss_pred             chhhhchhhHHHHHHHHHHHHHHH------CCCCEEEEecCcccCCCccccccccee-eccCCcccCCCCCHHHHHHHHH
Q 016901          221 PAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKETHNIT-LSQEDTLFGGQVSNLQVAELLA  293 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~------~g~~~~ivRpg~v~gp~~~~~~~~~~~-~~~~~~~~~~~i~~~DvA~~i~  293 (380)
                         +.++...|+.+|..+|.+++.      .+++++++|||+++||........... ............+++|+|+++.
T Consensus       149 ---~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~  225 (249)
T PRK09135        149 ---PLKGYPVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGNSFDEEARQAILARTPLKRIGTPEDIAEAVR  225 (249)
T ss_pred             ---CCCCchhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccccccCCHHHHHHHHhcCCcCCCcCHHHHHHHHH
Confidence               234556799999999988763      369999999999999864211000000 0001111233467999999997


Q ss_pred             HHHhCCCCccCcEEEEecCCCCC
Q 016901          294 CMAKNRSLSYCKVVEVIAETTAP  316 (380)
Q Consensus       294 ~~l~~~~~~~~~~~ni~~~~~~s  316 (380)
                      .++.+.....|++||+.++...+
T Consensus       226 ~~~~~~~~~~g~~~~i~~g~~~~  248 (249)
T PRK09135        226 FLLADASFITGQILAVDGGRSLT  248 (249)
T ss_pred             HHcCccccccCcEEEECCCeecc
Confidence            77765443568999999987543

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.90  E-value=1.4e-22  Score=186.68  Aligned_cols=216  Identities=13%  Similarity=0.038  Sum_probs=153.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      .+++|+||||+|+||++++++|+++|++|++++|++++.+.....++..             ..+++++.+|++|.+++.
T Consensus         3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~Dl~~~~~~~   69 (258)
T PRK12429          3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKA-------------GGKAIGVAMDVTDEEAIN   69 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc-------------CCcEEEEEcCCCCHHHHH
Confidence            5679999999999999999999999999999999988777665544432             157889999999999887


Q ss_pred             HHhc-------CCCEEEEccccCccccC------CCCCcchhhHHHH----HHHHHHHHHcCCCEEEEEccCCCCCCCCc
Q 016901          159 PALG-------NASVVICCIGASEKEVF------DITGPYRIDFQAT----KNLVDAATIAKVNHFIMVSSLGTNKFGFP  221 (380)
Q Consensus       159 ~a~~-------~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~----~~ll~a~~~~~v~r~V~~SS~~~~~~~~~  221 (380)
                      +++.       ++|+||||||.......      .....+++|+.++    ..+++++++.+.++||++||.......  
T Consensus        70 ~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~--  147 (258)
T PRK12429         70 AGIDYAVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGS--  147 (258)
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCC--
Confidence            7764       68999999985432211      1223366788884    445555566778899999997553221  


Q ss_pred             hhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccccccc-----cee-------eccCCcccCCC
Q 016901          222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH-----NIT-------LSQEDTLFGGQ  282 (380)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~-----~~~-------~~~~~~~~~~~  282 (380)
                          .....|+.+|.+.+.+.+       ..+++++++|||++++|........     ...       ........+.+
T Consensus       148 ----~~~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (258)
T PRK12429        148 ----AGKAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRF  223 (258)
T ss_pred             ----CCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhccCCcccc
Confidence                234569999998886664       2689999999999998753210000     000       00011122468


Q ss_pred             CCHHHHHHHHHHHHhCCC-CccCcEEEEecCC
Q 016901          283 VSNLQVAELLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       283 i~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      ++++|+|+++..++.... ...++.|++.++-
T Consensus       224 ~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g~  255 (258)
T PRK12429        224 TTVEEIADYALFLASFAAKGVTGQAWVVDGGW  255 (258)
T ss_pred             CCHHHHHHHHHHHcCccccCccCCeEEeCCCE
Confidence            999999999999987643 2347888888763

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.90  E-value=1.4e-22  Score=179.31  Aligned_cols=203  Identities=18%  Similarity=0.173  Sum_probs=150.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ..++|.++||||+++||.+++++|++.|++|++..|+.++++++..++.+               ..+..+..|++|.++
T Consensus         3 ~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~---------------~~~~~~~~DVtD~~~   67 (246)
T COG4221           3 TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA---------------GAALALALDVTDRAA   67 (246)
T ss_pred             CCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc---------------CceEEEeeccCCHHH
Confidence            34668999999999999999999999999999999999999998876532               368889999999988


Q ss_pred             HHHHh-------cCCCEEEEccccCcc------ccCCCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCCC
Q 016901          157 IEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       157 ~~~a~-------~~~d~Vi~~Ag~~~~------~~~~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~~  219 (380)
                      +++++       +.+|++|||||....      +..++..++++|+.|..+..++.    .+++.+++|++||.+.....
T Consensus        68 ~~~~i~~~~~~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y  147 (246)
T COG4221          68 VEAAIEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPY  147 (246)
T ss_pred             HHHHHHHHHHhhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccC
Confidence            66655       579999999996533      22356677999999988877765    56666799999998653221


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCc--ccCCCCCHHHHHH
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDT--LFGGQVSNLQVAE  290 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~--~~~~~i~~~DvA~  290 (380)
                            .....|+.+|++...+..       ..+++++.|.||.+.+.....-....- -.....  .....+.++|+|+
T Consensus       148 ------~~~~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~-~~~~~~~y~~~~~l~p~dIA~  220 (246)
T COG4221         148 ------PGGAVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGD-DERADKVYKGGTALTPEDIAE  220 (246)
T ss_pred             ------CCCccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCch-hhhHHHHhccCCCCCHHHHHH
Confidence                  222459999999876643       378999999999995431110000000 000011  1224699999999


Q ss_pred             HHHHHHhCCCC
Q 016901          291 LLACMAKNRSL  301 (380)
Q Consensus       291 ~i~~~l~~~~~  301 (380)
                      ++..+++.|..
T Consensus       221 ~V~~~~~~P~~  231 (246)
T COG4221         221 AVLFAATQPQH  231 (246)
T ss_pred             HHHHHHhCCCc
Confidence            99999999874

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.90  E-value=1.2e-22  Score=186.99  Aligned_cols=215  Identities=16%  Similarity=0.083  Sum_probs=153.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      +++|||||+|+||+++++.|+++|++|++++|+.+..+.+.+.+...             ..++.++.+|+.|.+++..+
T Consensus         2 ~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~~~~~   68 (255)
T TIGR01963         2 KTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDA-------------GGSVIYLVADVTKEDEIADM   68 (255)
T ss_pred             CEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-------------CCceEEEECCCCCHHHHHHH
Confidence            58999999999999999999999999999999987766665544321             14688999999999866544


Q ss_pred             h-------cCCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCCCCchh
Q 016901          161 L-------GNASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGFPAA  223 (380)
Q Consensus       161 ~-------~~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~~~~~~  223 (380)
                      +       .++|+||||||.......      +....+++|+.|+..+++++    ++.++++||++||.+.....    
T Consensus        69 ~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~----  144 (255)
T TIGR01963        69 IAAAAAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVAS----  144 (255)
T ss_pred             HHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCC----
Confidence            4       568999999986432211      12333668999988877776    55678899999997543221    


Q ss_pred             hhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccccc-----ccceee-------ccCCcccCCCCC
Q 016901          224 ILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE-----THNITL-------SQEDTLFGGQVS  284 (380)
Q Consensus       224 ~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~-----~~~~~~-------~~~~~~~~~~i~  284 (380)
                        .....|..+|...+.+++       ..+++++++|||++++|......     ......       .........+++
T Consensus       145 --~~~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (255)
T TIGR01963       145 --PFKSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQPTKRFVT  222 (255)
T ss_pred             --CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHccCccccCcC
Confidence              123469999998887765       25899999999999988421100     000000       001112335899


Q ss_pred             HHHHHHHHHHHHhCCC-CccCcEEEEecCCC
Q 016901          285 NLQVAELLACMAKNRS-LSYCKVVEVIAETT  314 (380)
Q Consensus       285 ~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~~  314 (380)
                      ++|+|++++.++.+.. ...+++|++.++..
T Consensus       223 ~~d~a~~~~~~~~~~~~~~~g~~~~~~~g~~  253 (255)
T TIGR01963       223 VDEVAETALFLASDAAAGITGQAIVLDGGWT  253 (255)
T ss_pred             HHHHHHHHHHHcCccccCccceEEEEcCccc
Confidence            9999999999998642 23578999988754

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.90  E-value=8.9e-23  Score=190.47  Aligned_cols=226  Identities=18%  Similarity=0.130  Sum_probs=158.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ++++|+||||+|+||++++++|+++|++|++++|+.++...+.+.+                ..++.++++|++|.+++.
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~----------------~~~~~~~~~D~~~~~~~~   65 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY----------------GDRLLPLALDVTDRAAVF   65 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc----------------cCCeeEEEccCCCHHHHH
Confidence            4578999999999999999999999999999999987765543311                146788999999998877


Q ss_pred             HHh-------cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCCCCc
Q 016901          159 PAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGFP  221 (380)
Q Consensus       159 ~a~-------~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~~~~  221 (380)
                      +++       .++|+||||||......      .++...+++|+.++.++++++    ++.+.+++|++||.+.....  
T Consensus        66 ~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~--  143 (275)
T PRK08263         66 AAVETAVEHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAF--  143 (275)
T ss_pred             HHHHHHHHHcCCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCC--
Confidence            665       36899999999653321      123444789999987777765    56677899999997653321  


Q ss_pred             hhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccccc--cccee----e---ccCCcccCCC-CC
Q 016901          222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE--THNIT----L---SQEDTLFGGQ-VS  284 (380)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~--~~~~~----~---~~~~~~~~~~-i~  284 (380)
                          .....|+.+|+..+.+.+       .+|++++++|||.+.++......  .....    .   .......+.+ ++
T Consensus       144 ----~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (275)
T PRK08263        144 ----PMSGIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQWSERSVDGD  219 (275)
T ss_pred             ----CCccHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHHHHhccCCCC
Confidence                123469999999887664       27899999999999876431100  00000    0   0000111235 89


Q ss_pred             HHHHHHHHHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhc
Q 016901          285 NLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKI  327 (380)
Q Consensus       285 ~~DvA~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~  327 (380)
                      ++|+|++++.+++.+. ..+.+|+..++...+..++.+.+.+.
T Consensus       220 p~dva~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (275)
T PRK08263        220 PEAAAEALLKLVDAEN-PPLRLFLGSGVLDLAKADYERRLATW  261 (275)
T ss_pred             HHHHHHHHHHHHcCCC-CCeEEEeCchHHHHHHHHHHHHHHHH
Confidence            9999999999999765 34555555455555566666666553

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.90  E-value=2.8e-22  Score=184.86  Aligned_cols=220  Identities=15%  Similarity=0.112  Sum_probs=159.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++++||||||+|+||++++++|+++|++|+++.|++++.+.+.+.++..+             .++.++++|++|.+++
T Consensus         8 ~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~-------------~~~~~~~~D~~~~~~~   74 (255)
T PRK07523          8 LTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQG-------------LSAHALAFDVTDHDAV   74 (255)
T ss_pred             CCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC-------------ceEEEEEccCCCHHHH
Confidence            467899999999999999999999999999999999887766655444211             4588899999999888


Q ss_pred             HHHhc-------CCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHHHH----cCCCEEEEEccCCCCCCCC
Q 016901          158 EPALG-------NASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~~~----~~v~r~V~~SS~~~~~~~~  220 (380)
                      ++++.       .+|+||||||.......      ++...+++|+.++.++++++.+    .+.++||++||......  
T Consensus        75 ~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~--  152 (255)
T PRK07523         75 RAAIDAFEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALA--  152 (255)
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccC--
Confidence            87763       58999999986532221      1233467999999999988764    35679999999755321  


Q ss_pred             chhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccc-cccce-eeccCCcccCCCCCHHHHHHH
Q 016901          221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-ETHNI-TLSQEDTLFGGQVSNLQVAEL  291 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~-~~~~~-~~~~~~~~~~~~i~~~DvA~~  291 (380)
                          ......|+.+|.+.+.+++       .+|+++++||||++.++..... ..... .........+.+..++|+|.+
T Consensus       153 ----~~~~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  228 (255)
T PRK07523        153 ----RPGIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTPAGRWGKVEELVGA  228 (255)
T ss_pred             ----CCCCccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence                1234579999999998765       3689999999999998843210 00000 000111123456789999999


Q ss_pred             HHHHHhCCC-CccCcEEEEecCCCCC
Q 016901          292 LACMAKNRS-LSYCKVVEVIAETTAP  316 (380)
Q Consensus       292 i~~~l~~~~-~~~~~~~ni~~~~~~s  316 (380)
                      ++.++.+.. ...|+++++.++...|
T Consensus       229 ~~~l~~~~~~~~~G~~i~~~gg~~~~  254 (255)
T PRK07523        229 CVFLASDASSFVNGHVLYVDGGITAS  254 (255)
T ss_pred             HHHHcCchhcCccCcEEEECCCeecc
Confidence            999997543 2457889888876443

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.90  E-value=4.3e-22  Score=183.37  Aligned_cols=217  Identities=16%  Similarity=0.161  Sum_probs=153.4

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-eCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAG-VRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l-~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~  155 (380)
                      ++++++++||||+|+||++++++|+++|++|+++ .|+.++.....+.+...             ..+++++++|++|.+
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~d~~   69 (254)
T PRK12746          3 NLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESN-------------GGKAFLIEADLNSID   69 (254)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-------------CCcEEEEEcCcCCHH
Confidence            3456899999999999999999999999999775 67766555444433211             146889999999999


Q ss_pred             cHHHHhc-------------CCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHHHHc--CCCEEEEEccCC
Q 016901          156 QIEPALG-------------NASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLG  214 (380)
Q Consensus       156 ~~~~a~~-------------~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~~~~--~v~r~V~~SS~~  214 (380)
                      ++.++++             ++|+||||||.......      .+...+++|+.++.++++++.+.  ..++||++||..
T Consensus        70 ~i~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~  149 (254)
T PRK12746         70 GVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAE  149 (254)
T ss_pred             HHHHHHHHHHHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHH
Confidence            8887764             58999999986532211      11333678999999999988753  345899999976


Q ss_pred             CCCCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccc-c-ceeeccCCcccCCCCCH
Q 016901          215 TNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-H-NITLSQEDTLFGGQVSN  285 (380)
Q Consensus       215 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~-~-~~~~~~~~~~~~~~i~~  285 (380)
                      +...      ......|+.+|.+.+.+++       ..++++++++||++++|....... . ..........++.++++
T Consensus       150 ~~~~------~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (254)
T PRK12746        150 VRLG------FTGSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNSSVFGRIGQV  223 (254)
T ss_pred             hcCC------CCCCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccChhHHHHHHhcCCcCCCCCH
Confidence            6321      1233469999999987754       268999999999999874321100 0 00111122234556799


Q ss_pred             HHHHHHHHHHHhCCC-CccCcEEEEecC
Q 016901          286 LQVAELLACMAKNRS-LSYCKVVEVIAE  312 (380)
Q Consensus       286 ~DvA~~i~~~l~~~~-~~~~~~~ni~~~  312 (380)
                      +|+|+++..++.++. ...+++|++.++
T Consensus       224 ~dva~~~~~l~~~~~~~~~g~~~~i~~~  251 (254)
T PRK12746        224 EDIADAVAFLASSDSRWVTGQIIDVSGG  251 (254)
T ss_pred             HHHHHHHHHHcCcccCCcCCCEEEeCCC
Confidence            999999998887653 235789999876

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.90  E-value=4.9e-22  Score=182.50  Aligned_cols=217  Identities=16%  Similarity=0.162  Sum_probs=154.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEE-EeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRA-GVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~-l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      .+++++||||+|+||++++++|+++|++|++ ..|+..+.++..+.++..+             .++.++.+|++|++++
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~D~~~~~~~   69 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALG-------------RKALAVKANVGDVEKI   69 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC-------------CeEEEEEcCCCCHHHH
Confidence            4679999999999999999999999999876 4788776666555544321             5688899999999888


Q ss_pred             HHHhc-------CCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHHHH----cCCCEEEEEccCCCCCCCC
Q 016901          158 EPALG-------NASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~~~----~~v~r~V~~SS~~~~~~~~  220 (380)
                      .++++       ++|+||||||.......      .+...+++|+.++.++++++..    .+.++||++||++....  
T Consensus        70 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~--  147 (250)
T PRK08063         70 KEMFAQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRY--  147 (250)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccC--
Confidence            77764       58999999986432211      1122367899999888887754    45679999999765332  


Q ss_pred             chhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccc-ccee-eccCCcccCCCCCHHHHHHH
Q 016901          221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-HNIT-LSQEDTLFGGQVSNLQVAEL  291 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~-~~~~-~~~~~~~~~~~i~~~DvA~~  291 (380)
                          ......|+.+|.+.|.+++       ..|+++++|+||++.++....... ..+. ........+.+++++|+|++
T Consensus       148 ----~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  223 (250)
T PRK08063        148 ----LENYTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREELLEDARAKTPAGRMVEPEDVANA  223 (250)
T ss_pred             ----CCCccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCchHHHHHHhcCCCCCCCcCHHHHHHH
Confidence                1234579999999998875       268999999999998764221110 0000 00111123457999999999


Q ss_pred             HHHHHhCCC-CccCcEEEEecCCC
Q 016901          292 LACMAKNRS-LSYCKVVEVIAETT  314 (380)
Q Consensus       292 i~~~l~~~~-~~~~~~~ni~~~~~  314 (380)
                      ++.++.++. ...++.+++.++..
T Consensus       224 ~~~~~~~~~~~~~g~~~~~~gg~~  247 (250)
T PRK08063        224 VLFLCSPEADMIRGQTIIVDGGRS  247 (250)
T ss_pred             HHHHcCchhcCccCCEEEECCCee
Confidence            999997643 23578888887753

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.90  E-value=1.3e-22  Score=184.75  Aligned_cols=216  Identities=28%  Similarity=0.312  Sum_probs=156.6

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchh--HHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           83 AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR--AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        83 vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      |+|+||||.+|+++++.|++.|++|++++|+.++  ...+..                   .+++++.+|+.|.+++.++
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~-------------------~g~~vv~~d~~~~~~l~~a   61 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQA-------------------LGAEVVEADYDDPESLVAA   61 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHH-------------------TTTEEEES-TT-HHHHHHH
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhc-------------------ccceEeecccCCHHHHHHH
Confidence            7999999999999999999999999999999843  222222                   5688999999999999999


Q ss_pred             hcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCCchhhhchhhHHHHHHHHHHH
Q 016901          161 LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEE  240 (380)
Q Consensus       161 ~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~  240 (380)
                      |+++|+||++.+...          ........++++||++.|++|||+.|........   ....+...+...|...|+
T Consensus        62 l~g~d~v~~~~~~~~----------~~~~~~~~~li~Aa~~agVk~~v~ss~~~~~~~~---~~~~p~~~~~~~k~~ie~  128 (233)
T PF05368_consen   62 LKGVDAVFSVTPPSH----------PSELEQQKNLIDAAKAAGVKHFVPSSFGADYDES---SGSEPEIPHFDQKAEIEE  128 (233)
T ss_dssp             HTTCSEEEEESSCSC----------CCHHHHHHHHHHHHHHHT-SEEEESEESSGTTTT---TTSTTHHHHHHHHHHHHH
T ss_pred             HcCCceEEeecCcch----------hhhhhhhhhHHHhhhccccceEEEEEeccccccc---ccccccchhhhhhhhhhh
Confidence            999999999987442          2245678899999999999999964433332111   111222345578999999


Q ss_pred             HHHHCCCCEEEEecCcccCCCcc-------ccccc-ceeeccCCcccCCC-CCHHHHHHHHHHHHhCCCCc-cCcEEEEe
Q 016901          241 ALIASGLPYTIVRPGGMERPTDA-------YKETH-NITLSQEDTLFGGQ-VSNLQVAELLACMAKNRSLS-YCKVVEVI  310 (380)
Q Consensus       241 ~l~~~g~~~~ivRpg~v~gp~~~-------~~~~~-~~~~~~~~~~~~~~-i~~~DvA~~i~~~l~~~~~~-~~~~~ni~  310 (380)
                      ++++.++++|+||||.++.+...       ..... .+.+.........+ ++.+|+|+++..++.++... .++.+.+.
T Consensus       129 ~l~~~~i~~t~i~~g~f~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~~~~~~~~~~  208 (233)
T PF05368_consen  129 YLRESGIPYTIIRPGFFMENLLPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKHNNGKTIFLA  208 (233)
T ss_dssp             HHHHCTSEBEEEEE-EEHHHHHTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGTTEEEEEEEG
T ss_pred             hhhhccccceeccccchhhhhhhhhcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHhcCCEEEEeC
Confidence            99999999999999987643211       11111 12222222211123 59999999999999998754 56788776


Q ss_pred             cCCCCCcchHHHHHHhcCCCC
Q 016901          311 AETTAPLTPMEELLAKIPSQR  331 (380)
Q Consensus       311 ~~~~~s~~~~~e~~~~~~~~~  331 (380)
                      + +..|..|+++.+++.+|++
T Consensus       209 ~-~~~t~~eia~~~s~~~G~~  228 (233)
T PF05368_consen  209 G-ETLTYNEIAAILSKVLGKK  228 (233)
T ss_dssp             G-GEEEHHHHHHHHHHHHTSE
T ss_pred             C-CCCCHHHHHHHHHHHHCCc
Confidence            6 6678999999999999875

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.90  E-value=2.2e-22  Score=184.77  Aligned_cols=217  Identities=11%  Similarity=0.026  Sum_probs=155.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ..++++++||||+|+||++++++|+++|++|+++.|+.+....+.+.+...             ..++.++.+|++|.++
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~Dl~~~~~   69 (250)
T PRK07774          3 RFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVAD-------------GGTAIAVQVDVSDPDS   69 (250)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-------------CCcEEEEEcCCCCHHH
Confidence            346789999999999999999999999999999999987666555444321             1467789999999988


Q ss_pred             HHHHh-------cCCCEEEEccccCccc---------cCCCCCcchhhHHHHHHHHHHHHH----cCCCEEEEEccCCCC
Q 016901          157 IEPAL-------GNASVVICCIGASEKE---------VFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTN  216 (380)
Q Consensus       157 ~~~a~-------~~~d~Vi~~Ag~~~~~---------~~~~~~~~~~nv~g~~~ll~a~~~----~~v~r~V~~SS~~~~  216 (380)
                      +.+++       +.+|+||||||.....         ..++...+++|+.++.++++++..    .+.++||++||.+..
T Consensus        70 ~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~  149 (250)
T PRK07774         70 AKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAW  149 (250)
T ss_pred             HHHHHHHHHHHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEeccccc
Confidence            77665       3689999999964211         112233467999999999888764    345699999997763


Q ss_pred             CCCCchhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCccccccccee-eccCCcccCCCCCHHHH
Q 016901          217 KFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNIT-LSQEDTLFGGQVSNLQV  288 (380)
Q Consensus       217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~~~~~~-~~~~~~~~~~~i~~~Dv  288 (380)
                      .         +...|+.+|++.|.+++.       .|+++++++||.+.++........... ..........+.+++|+
T Consensus       150 ~---------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  220 (250)
T PRK07774        150 L---------YSNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTPKEFVADMVKGIPLSRMGTPEDL  220 (250)
T ss_pred             C---------CccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccCCHHHHHHHHhcCCCCCCcCHHHH
Confidence            2         234699999999988752       479999999999987753211000000 00001112235789999


Q ss_pred             HHHHHHHHhCCC-CccCcEEEEecCCCC
Q 016901          289 AELLACMAKNRS-LSYCKVVEVIAETTA  315 (380)
Q Consensus       289 A~~i~~~l~~~~-~~~~~~~ni~~~~~~  315 (380)
                      |++++.++.... ...+++|++.++...
T Consensus       221 a~~~~~~~~~~~~~~~g~~~~v~~g~~~  248 (250)
T PRK07774        221 VGMCLFLLSDEASWITGQIFNVDGGQII  248 (250)
T ss_pred             HHHHHHHhChhhhCcCCCEEEECCCeec
Confidence            999999987642 245789999988654

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.90  E-value=1.1e-22  Score=187.87  Aligned_cols=216  Identities=13%  Similarity=0.090  Sum_probs=157.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +.+++++||||+|+||+++++.|+++|++|++++|+.+....+.+.+.                .++.++.+|++|.+++
T Consensus         4 l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~----------------~~~~~~~~D~~~~~~~   67 (257)
T PRK07067          4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIG----------------PAAIAVSLDVTRQDSI   67 (257)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhC----------------CceEEEEccCCCHHHH
Confidence            456899999999999999999999999999999999877665543221                4588899999999888


Q ss_pred             HHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHHHc----C-CCEEEEEccCCCCCCC
Q 016901          158 EPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIA----K-VNHFIMVSSLGTNKFG  219 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~~~----~-v~r~V~~SS~~~~~~~  219 (380)
                      +++++       .+|+||||||......      .++...+++|+.++.++++++...    + -++||++||...... 
T Consensus        68 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~-  146 (257)
T PRK07067         68 DRIVAAAVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRG-  146 (257)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCC-
Confidence            77764       6899999998653211      123445789999999999988542    2 248999999654221 


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccccc-----ccce------eeccCCcccCC
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE-----THNI------TLSQEDTLFGG  281 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~-----~~~~------~~~~~~~~~~~  281 (380)
                           ..+...|+.+|.+.+.+++       ..|+++++|+||+++++......     ....      .........+.
T Consensus       147 -----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (257)
T PRK07067        147 -----EALVSHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGR  221 (257)
T ss_pred             -----CCCCchhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCCC
Confidence                 1234579999999887765       37899999999999997421100     0000      00011223456


Q ss_pred             CCCHHHHHHHHHHHHhCCC-CccCcEEEEecCCCC
Q 016901          282 QVSNLQVAELLACMAKNRS-LSYCKVVEVIAETTA  315 (380)
Q Consensus       282 ~i~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~~~  315 (380)
                      +.+++|+|+++..++.... ...+++|++.+++..
T Consensus       222 ~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~~~  256 (257)
T PRK07067        222 MGVPDDLTGMALFLASADADYIVAQTYNVDGGNWM  256 (257)
T ss_pred             ccCHHHHHHHHHHHhCcccccccCcEEeecCCEeC
Confidence            7899999999999998643 346899999887643

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.90  E-value=4.6e-22  Score=181.68  Aligned_cols=217  Identities=16%  Similarity=0.126  Sum_probs=155.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++++|+||||+|+||+++++.|+++|++|+++.|++.+...+...++..+             .++.++.+|++|++++
T Consensus         3 ~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~D~~~~~~~   69 (246)
T PRK05653          3 LQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAG-------------GEARVLVFDVSDEAAV   69 (246)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcC-------------CceEEEEccCCCHHHH
Confidence            356799999999999999999999999999999999877665555443221             5688999999999888


Q ss_pred             HHHhc-------CCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCCCC
Q 016901          158 EPALG-------NASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~~~  220 (380)
                      .+++.       .+|+|||++|.......      ++...++.|+.++.++++++.    +.++++||++||.+....  
T Consensus        70 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~--  147 (246)
T PRK05653         70 RALIEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTG--  147 (246)
T ss_pred             HHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccC--
Confidence            77664       47999999986543221      123336789999999888874    566789999999755321  


Q ss_pred             chhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHH
Q 016901          221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA  293 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~  293 (380)
                          ......|..+|...+.+++       ..+++++++|||.++++.....................+++++|+++++.
T Consensus       148 ----~~~~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  223 (246)
T PRK05653        148 ----NPGQTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGLPEEVKAEILKEIPLGRLGQPEEVANAVA  223 (246)
T ss_pred             ----CCCCcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence                1233569999998876654       25899999999999988542100000000001111245789999999999


Q ss_pred             HHHhCCC-CccCcEEEEecCC
Q 016901          294 CMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       294 ~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      .++.... ...+++|++.+|.
T Consensus       224 ~~~~~~~~~~~g~~~~~~gg~  244 (246)
T PRK05653        224 FLASDAASYITGQVIPVNGGM  244 (246)
T ss_pred             HHcCchhcCccCCEEEeCCCe
Confidence            9987532 2368899998875

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.90  E-value=6.5e-22  Score=184.98  Aligned_cols=218  Identities=17%  Similarity=0.177  Sum_probs=153.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      +++++|||||+|+||+++++.|+++|++|++++|+++......+.+...+.           ..+++++.+|++|+++++
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-----------~~~~~~~~~D~~d~~~~~   70 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNL-----------QQNIKVQQLDVTDQNSIH   70 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCC-----------CCceeEEecCCCCHHHHH
Confidence            457899999999999999999999999999999998877666554433211           146899999999988776


Q ss_pred             H---H---hcCCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCCCCch
Q 016901          159 P---A---LGNASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGFPA  222 (380)
Q Consensus       159 ~---a---~~~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~~~~~  222 (380)
                      +   +   ++++|+||||||.......      ++...+++|+.++.++++++    ++.+.++||++||.+.....   
T Consensus        71 ~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~---  147 (280)
T PRK06914         71 NFQLVLKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGF---  147 (280)
T ss_pred             HHHHHHHhcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCC---
Confidence            5   1   2468999999986543211      12233678999988888775    56667899999997543211   


Q ss_pred             hhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccc-cceeec--------------cCCcccC
Q 016901          223 AILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-HNITLS--------------QEDTLFG  280 (380)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~-~~~~~~--------------~~~~~~~  280 (380)
                         .....|+.+|...+.+++       ..|++++++|||.+++|....... ......              .......
T Consensus       148 ---~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (280)
T PRK06914        148 ---PGLSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGSD  224 (280)
T ss_pred             ---CCCchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHHhhhhh
Confidence               233569999999987765       358999999999998873211000 000000              0001112


Q ss_pred             CCCCHHHHHHHHHHHHhCCCCccCcEEEEecCCCC
Q 016901          281 GQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTA  315 (380)
Q Consensus       281 ~~i~~~DvA~~i~~~l~~~~~~~~~~~ni~~~~~~  315 (380)
                      .+++++|+|++++.++.++..  ...|+++++...
T Consensus       225 ~~~~~~dva~~~~~~~~~~~~--~~~~~~~~~~~~  257 (280)
T PRK06914        225 TFGNPIDVANLIVEIAESKRP--KLRYPIGKGVKL  257 (280)
T ss_pred             ccCCHHHHHHHHHHHHcCCCC--CcccccCCchHH
Confidence            468999999999999998764  357888876544

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.90  E-value=7.4e-22  Score=182.20  Aligned_cols=225  Identities=17%  Similarity=0.117  Sum_probs=162.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      +++++||||+|+||++++++|+++|++|++++|+.++.+.+.+.+.               ..+++++++|+.|.+++.+
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~---------------~~~~~~~~~D~~~~~~~~~   66 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG---------------DARFVPVACDLTDAASLAA   66 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc---------------CCceEEEEecCCCHHHHHH
Confidence            4689999999999999999999999999999999877665544331               1468899999999998877


Q ss_pred             Hhc-------CCCEEEEccccCccccCC------CCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCCCCch
Q 016901          160 ALG-------NASVVICCIGASEKEVFD------ITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGFPA  222 (380)
Q Consensus       160 a~~-------~~d~Vi~~Ag~~~~~~~~------~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~~~~~  222 (380)
                      ++.       ++|+||||+|........      +...+.+|+.++.++++++    .+.+.++||++||.......   
T Consensus        67 ~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---  143 (257)
T PRK07074         67 ALANAAAERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAAL---  143 (257)
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCCC---
Confidence            764       589999999864322111      1222568999998888877    34556789999996442111   


Q ss_pred             hhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcccccccceee-c--cCCcccCCCCCHHHHHHHH
Q 016901          223 AILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITL-S--QEDTLFGGQVSNLQVAELL  292 (380)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~~~~~~~-~--~~~~~~~~~i~~~DvA~~i  292 (380)
                          ....|+.+|.+.+.+++.       +|+++++++||+++++...........+ .  ........+++++|+++++
T Consensus       144 ----~~~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~  219 (257)
T PRK07074        144 ----GHPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKWYPLQDFATPDDVANAV  219 (257)
T ss_pred             ----CCcccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence                113699999999877752       5899999999999887532111000000 0  0111234689999999999


Q ss_pred             HHHHhCC-CCccCcEEEEecCCCCCcchHHHHHHh
Q 016901          293 ACMAKNR-SLSYCKVVEVIAETTAPLTPMEELLAK  326 (380)
Q Consensus       293 ~~~l~~~-~~~~~~~~ni~~~~~~s~~~~~e~~~~  326 (380)
                      +.++.+. ....+.++++.++...++.|+.+.+.+
T Consensus       220 ~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~  254 (257)
T PRK07074        220 LFLASPAARAITGVCLPVDGGLTAGNREMARTLTL  254 (257)
T ss_pred             HHHcCchhcCcCCcEEEeCCCcCcCChhhhhhhcc
Confidence            9999653 224578899999988888888887654

>PRK06182 short chain dehydrogenase; Validated

Probab=99.89  E-value=4.1e-22  Score=185.78  Aligned_cols=207  Identities=17%  Similarity=0.206  Sum_probs=146.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ++++++||||+|+||++++++|+++|++|++++|+.++..++..                   .+++++.+|++|.++++
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~-------------------~~~~~~~~Dv~~~~~~~   62 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLAS-------------------LGVHPLSLDVTDEASIK   62 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-------------------CCCeEEEeeCCCHHHHH
Confidence            46799999999999999999999999999999999876654432                   45889999999999888


Q ss_pred             HHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHH----HHHHHHHHHcCCCEEEEEccCCCCCCCCc
Q 016901          159 PALG-------NASVVICCIGASEKEV------FDITGPYRIDFQAT----KNLVDAATIAKVNHFIMVSSLGTNKFGFP  221 (380)
Q Consensus       159 ~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~----~~ll~a~~~~~v~r~V~~SS~~~~~~~~~  221 (380)
                      ++++       ++|+||||||......      .++...+++|+.++    +.+++.+++.+.+++|++||.+...+.  
T Consensus        63 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~--  140 (273)
T PRK06182         63 AAVDTIIAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYT--  140 (273)
T ss_pred             HHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCC--
Confidence            7774       7899999999653221      12344478899885    455556677777899999997643221  


Q ss_pred             hhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccccccccee------ec----------cCCcc
Q 016901          222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNIT------LS----------QEDTL  278 (380)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~------~~----------~~~~~  278 (380)
                          .....|+.+|.+.+.+.+       .+|+++++|+||++.+|...........      ..          .....
T Consensus       141 ----~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (273)
T PRK06182        141 ----PLGAWYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTYG  216 (273)
T ss_pred             ----CCccHhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHhhc
Confidence                122359999999997753       3689999999999988753211000000      00          00001


Q ss_pred             cCCCCCHHHHHHHHHHHHhCCCCccCcEEEEecC
Q 016901          279 FGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAE  312 (380)
Q Consensus       279 ~~~~i~~~DvA~~i~~~l~~~~~~~~~~~ni~~~  312 (380)
                      .+.+.+++|+|++++.++.....  ...|.++.+
T Consensus       217 ~~~~~~~~~vA~~i~~~~~~~~~--~~~~~~g~~  248 (273)
T PRK06182        217 SGRLSDPSVIADAISKAVTARRP--KTRYAVGFG  248 (273)
T ss_pred             cccCCCHHHHHHHHHHHHhCCCC--CceeecCcc
Confidence            22457999999999999986432  345555443

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.89  E-value=4.7e-22  Score=182.34  Aligned_cols=216  Identities=14%  Similarity=0.088  Sum_probs=152.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-CchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVR-SVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      +.+++++||||+|+||++++++|+++|++|+++.+ ++...+++.+.+...             ..++.++.+|++|.++
T Consensus         4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~-------------~~~~~~~~~D~~~~~~   70 (247)
T PRK12935          4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKE-------------GHDVYAVQADVSKVED   70 (247)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhc-------------CCeEEEEECCCCCHHH
Confidence            45789999999999999999999999999987654 444444443333221             1468899999999988


Q ss_pred             HHHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHHH----cCCCEEEEEccCCCCCCC
Q 016901          157 IEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       157 ~~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~~----~~v~r~V~~SS~~~~~~~  219 (380)
                      +.++++       .+|+||||||......      ..+...+++|+.++.++++++..    .+.++||++||.......
T Consensus        71 ~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~  150 (247)
T PRK12935         71 ANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGG  150 (247)
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCC
Confidence            887774       4899999998653221      12334478999999999988863    345689999997543221


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccccccc-ceeeccCCcccCCCCCHHHHHHH
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH-NITLSQEDTLFGGQVSNLQVAEL  291 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~-~~~~~~~~~~~~~~i~~~DvA~~  291 (380)
                            .....|+.+|.+.+.+++       ..++++++++||++.++........ ...... ....+.+.+++|++++
T Consensus       151 ------~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~-~~~~~~~~~~edva~~  223 (247)
T PRK12935        151 ------FGQTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEVPEEVRQKIVA-KIPKKRFGQADEIAKG  223 (247)
T ss_pred             ------CCCcchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhccHHHHHHHHH-hCCCCCCcCHHHHHHH
Confidence                  233579999998887754       2589999999999987632110000 000001 1112357999999999


Q ss_pred             HHHHHhCCCCccCcEEEEecCC
Q 016901          292 LACMAKNRSLSYCKVVEVIAET  313 (380)
Q Consensus       292 i~~~l~~~~~~~~~~~ni~~~~  313 (380)
                      ++.++.......++.||+.++.
T Consensus       224 ~~~~~~~~~~~~g~~~~i~~g~  245 (247)
T PRK12935        224 VVYLCRDGAYITGQQLNINGGL  245 (247)
T ss_pred             HHHHcCcccCccCCEEEeCCCc
Confidence            9999976544568999998874

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.89  E-value=8.7e-22  Score=184.01  Aligned_cols=200  Identities=14%  Similarity=0.113  Sum_probs=143.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ++++|+||||+|+||++++++|+++|++|++++|++++...+.+.                ...++.++.+|++|.+++.
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~----------------~~~~~~~~~~D~~d~~~~~   66 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEAL----------------HPDRALARLLDVTDFDAID   66 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhh----------------cCCCeeEEEccCCCHHHHH
Confidence            467899999999999999999999999999999998766554321                0146888999999998887


Q ss_pred             HHhc-------CCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCCCCc
Q 016901          159 PALG-------NASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGFP  221 (380)
Q Consensus       159 ~a~~-------~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~~~~  221 (380)
                      ++++       ++|+||||||.......      ++...+++|+.|+.++++++    ++.+.++||++||.+.....  
T Consensus        67 ~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~--  144 (277)
T PRK06180         67 AVVADAEATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITM--  144 (277)
T ss_pred             HHHHHHHHHhCCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCC--
Confidence            7664       58999999996532211      12333789999999999885    34556799999997653221  


Q ss_pred             hhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcccccc---ccee-----e---c--cCCcccCC
Q 016901          222 AAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET---HNIT-----L---S--QEDTLFGG  281 (380)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~~---~~~~-----~---~--~~~~~~~~  281 (380)
                          .....|+.+|.++|.+++.       .|++++++|||++.++.......   ....     .   .  ........
T Consensus       145 ----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (277)
T PRK06180        145 ----PGIGYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSGKQ  220 (277)
T ss_pred             ----CCcchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhccCC
Confidence                2345799999999877652       59999999999998763211000   0000     0   0  00011123


Q ss_pred             CCCHHHHHHHHHHHHhCCC
Q 016901          282 QVSNLQVAELLACMAKNRS  300 (380)
Q Consensus       282 ~i~~~DvA~~i~~~l~~~~  300 (380)
                      +.+++|+|++++.+++++.
T Consensus       221 ~~~~~dva~~~~~~l~~~~  239 (277)
T PRK06180        221 PGDPAKAAQAILAAVESDE  239 (277)
T ss_pred             CCCHHHHHHHHHHHHcCCC
Confidence            5789999999999998765

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.5e-21  Score=182.09  Aligned_cols=211  Identities=18%  Similarity=0.189  Sum_probs=148.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      .+++++||||+|+||+++++.|+++|++|+++.|+.+........+...+             .++.++.+|++|.+++.
T Consensus         9 ~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~Dl~~~~~~~   75 (274)
T PRK07775          9 DRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADG-------------GEAVAFPLDVTDPDSVK   75 (274)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------------CeEEEEECCCCCHHHHH
Confidence            56799999999999999999999999999999998776555444333211             46888999999999887


Q ss_pred             HHhc-------CCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCCCCc
Q 016901          159 PALG-------NASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFP  221 (380)
Q Consensus       159 ~a~~-------~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~~~~  221 (380)
                      ++++       ++|+||||||.......      ++...+++|+.++.++++++.    +.+.++||++||.......  
T Consensus        76 ~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~--  153 (274)
T PRK07775         76 SFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQR--  153 (274)
T ss_pred             HHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCC--
Confidence            7664       68999999986432111      122336899999999988864    3455689999997653321  


Q ss_pred             hhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcc-cccccceee----cc-CCcccCCCCCHHHH
Q 016901          222 AAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDA-YKETHNITL----SQ-EDTLFGGQVSNLQV  288 (380)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~-~~~~~~~~~----~~-~~~~~~~~i~~~Dv  288 (380)
                          .....|+.+|.+.|.+++.       .|+++++||||.+.++... .........    .. .......+++++|+
T Consensus       154 ----~~~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  229 (274)
T PRK07775        154 ----PHMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKWGQARHDYFLRASDL  229 (274)
T ss_pred             ----CCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHhcccccccccCHHHH
Confidence                2234699999999988753       4899999999998655221 111000000    00 01112357999999


Q ss_pred             HHHHHHHHhCCCCccCcEEEEe
Q 016901          289 AELLACMAKNRSLSYCKVVEVI  310 (380)
Q Consensus       289 A~~i~~~l~~~~~~~~~~~ni~  310 (380)
                      |++++.+++.+.  .+.+||+-
T Consensus       230 a~a~~~~~~~~~--~~~~~~~~  249 (274)
T PRK07775        230 ARAITFVAETPR--GAHVVNME  249 (274)
T ss_pred             HHHHHHHhcCCC--CCCeeEEe
Confidence            999999998754  35666665

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.7e-21  Score=177.31  Aligned_cols=207  Identities=17%  Similarity=0.142  Sum_probs=152.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      .+++++|||||+|+||+++++.|+++|++|++++|++.+..+..+.+..               ..++++.+|++|.+++
T Consensus         5 ~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~---------------~~~~~~~~D~~~~~~~   69 (239)
T PRK12828          5 LQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPA---------------DALRIGGIDLVDPQAA   69 (239)
T ss_pred             CCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhh---------------cCceEEEeecCCHHHH
Confidence            3578999999999999999999999999999999988765554433321               3567888999998888


Q ss_pred             HHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCCCC
Q 016901          158 EPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~~~  220 (380)
                      .++++       ++|+|||++|......      .++...+++|+.++.++++++.    +.++++||++||.+..... 
T Consensus        70 ~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-  148 (239)
T PRK12828         70 RRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAG-  148 (239)
T ss_pred             HHHHHHHHHHhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCC-
Confidence            77663       6899999998643211      1122336789999999888774    4568899999998764321 


Q ss_pred             chhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHH
Q 016901          221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA  293 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~  293 (380)
                           .....|+.+|.+.+.+++       ..+++++++|||+++++.....      ..  ......+++++|+|+++.
T Consensus       149 -----~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~------~~--~~~~~~~~~~~dva~~~~  215 (239)
T PRK12828        149 -----PGMGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRAD------MP--DADFSRWVTPEQIAAVIA  215 (239)
T ss_pred             -----CCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhc------CC--chhhhcCCCHHHHHHHHH
Confidence                 234569999998876664       3689999999999998742110      01  111234799999999999


Q ss_pred             HHHhCCC-CccCcEEEEecCC
Q 016901          294 CMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       294 ~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      .++.+.. ...++.+++.+++
T Consensus       216 ~~l~~~~~~~~g~~~~~~g~~  236 (239)
T PRK12828        216 FLLSDEAQAITGASIPVDGGV  236 (239)
T ss_pred             HHhCcccccccceEEEecCCE
Confidence            9998653 2357888888775

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.89  E-value=2.1e-21  Score=178.16  Aligned_cols=216  Identities=14%  Similarity=0.118  Sum_probs=154.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      +++++|||||+|+||++++++|+++|++|++++|+.++...+.+.+...             ..++.++.+|++|.++++
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~d~~~~~~~~   68 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAK-------------GGNAQAFACDITDRDSVD   68 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhc-------------CCcEEEEEcCCCCHHHHH
Confidence            4678999999999999999999999999999999987776665544332             156889999999998888


Q ss_pred             HHhc-------CCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCCCCc
Q 016901          159 PALG-------NASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFP  221 (380)
Q Consensus       159 ~a~~-------~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~~~~  221 (380)
                      +++.       ++|+||||+|.......      .+...+++|+.++.++++++.    +.+.+++|++||.+.....  
T Consensus        69 ~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~--  146 (250)
T TIGR03206        69 TAVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGS--  146 (250)
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCC--
Confidence            7764       68999999986432111      123347899999998887764    5567799999997663321  


Q ss_pred             hhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcccccc---cc--e-eeccCCcccCCCCCHHHH
Q 016901          222 AAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET---HN--I-TLSQEDTLFGGQVSNLQV  288 (380)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~~---~~--~-~~~~~~~~~~~~i~~~Dv  288 (380)
                          .....|+.+|++.+.+++.       .+++++++|||+++++.......   ..  . .........+....++|+
T Consensus       147 ----~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  222 (250)
T TIGR03206       147 ----SGEAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPLGRLGQPDDL  222 (250)
T ss_pred             ----CCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCCccCCcCHHHH
Confidence                1234699999888776652       58999999999999874211000   00  0 000111122345789999


Q ss_pred             HHHHHHHHhCCC-CccCcEEEEecCC
Q 016901          289 AELLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       289 A~~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      |+++..++..+. ...++++++.++.
T Consensus       223 a~~~~~l~~~~~~~~~g~~~~~~~g~  248 (250)
T TIGR03206       223 PGAILFFSSDDASFITGQVLSVSGGL  248 (250)
T ss_pred             HHHHHHHcCcccCCCcCcEEEeCCCc
Confidence            999999987643 3457889887763

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.89  E-value=9.4e-22  Score=180.41  Aligned_cols=218  Identities=12%  Similarity=0.089  Sum_probs=157.1

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .+.+++++||||+|+||+++++.|+++|++|+++.|++++.....+.++..+             .++.++.+|++|.++
T Consensus         4 ~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~Dl~~~~~   70 (250)
T PRK12939          4 NLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAG-------------GRAHAIAADLADPAS   70 (250)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC-------------CcEEEEEccCCCHHH
Confidence            3467899999999999999999999999999999999887766655443221             468899999999988


Q ss_pred             HHHHh-------cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHHH----cCCCEEEEEccCCCCCCC
Q 016901          157 IEPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       157 ~~~a~-------~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~~----~~v~r~V~~SS~~~~~~~  219 (380)
                      +.+++       +++|+||||+|......      .++...+++|+.++.++++++..    .+.++||++||.......
T Consensus        71 ~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~  150 (250)
T PRK12939         71 VQRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGA  150 (250)
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCC
Confidence            88776       46899999998643221      12233367899999999888753    334599999996553211


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccc-cceeeccCCcccCCCCCHHHHHHH
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-HNITLSQEDTLFGGQVSNLQVAEL  291 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~-~~~~~~~~~~~~~~~i~~~DvA~~  291 (380)
                            .....|+.+|...+.+++       ..++++++|+||.+.++....... ..............+++++|+|++
T Consensus       151 ------~~~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  224 (250)
T PRK12939        151 ------PKLGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPADERHAYYLKGRALERLQVPDDVAGA  224 (250)
T ss_pred             ------CCcchHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCChHHHHHHHhcCCCCCCCCHHHHHHH
Confidence                  123469999999998775       268999999999998774321111 000001111123357899999999


Q ss_pred             HHHHHhCCC-CccCcEEEEecCC
Q 016901          292 LACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       292 i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      ++.++.... ...|+.+++.++.
T Consensus       225 ~~~l~~~~~~~~~G~~i~~~gg~  247 (250)
T PRK12939        225 VLFLLSDAARFVTGQLLPVNGGF  247 (250)
T ss_pred             HHHHhCccccCccCcEEEECCCc
Confidence            999997643 3468888888875

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.89  E-value=5.9e-21  Score=178.29  Aligned_cols=205  Identities=17%  Similarity=0.072  Sum_probs=145.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .+++++++||||+|+||+++++.|+++|++|++.+|+.+..++..+.++..+             .++.++.+|++|.++
T Consensus         3 ~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~-------------~~~~~~~~Dv~d~~~   69 (275)
T PRK05876          3 GFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEG-------------FDVHGVMCDVRHREE   69 (275)
T ss_pred             CcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------------CeEEEEeCCCCCHHH
Confidence            4577899999999999999999999999999999999877766655443211             468889999999988


Q ss_pred             HHHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHH----HcC-CCEEEEEccCCCCCC
Q 016901          157 IEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAK-VNHFIMVSSLGTNKF  218 (380)
Q Consensus       157 ~~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~----~~~-v~r~V~~SS~~~~~~  218 (380)
                      +.++++       .+|+||||||......      .++...+++|+.|+.++++++.    +.+ .++||++||......
T Consensus        70 v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~  149 (275)
T PRK05876         70 VTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVP  149 (275)
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccC
Confidence            877663       5899999999642211      1223347899999999888864    444 468999999765321


Q ss_pred             CCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccccccc-ce--------eeccCCcccCCC
Q 016901          219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH-NI--------TLSQEDTLFGGQ  282 (380)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~-~~--------~~~~~~~~~~~~  282 (380)
                            ......|+.+|.+.+.+.+       ..|+++++|+||.+.++........ ..        ...........+
T Consensus       150 ------~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (275)
T PRK05876        150 ------NAGLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDN  223 (275)
T ss_pred             ------CCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCccccccccccccccccccccC
Confidence                  1234579999998554432       3689999999999988742111000 00        000001112246


Q ss_pred             CCHHHHHHHHHHHHhCCC
Q 016901          283 VSNLQVAELLACMAKNRS  300 (380)
Q Consensus       283 i~~~DvA~~i~~~l~~~~  300 (380)
                      ++++|+|+.++.++.++.
T Consensus       224 ~~~~dva~~~~~ai~~~~  241 (275)
T PRK05876        224 LGVDDIAQLTADAILANR  241 (275)
T ss_pred             CCHHHHHHHHHHHHHcCC
Confidence            899999999999997654

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.89  E-value=5.1e-21  Score=173.95  Aligned_cols=202  Identities=16%  Similarity=0.094  Sum_probs=152.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .+++++++|||||++||..+++.|+++|++|+++.|+.+++.++.+++++..            .-.++++.+|++|+++
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~------------~v~v~vi~~DLs~~~~   70 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKT------------GVEVEVIPADLSDPEA   70 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhh------------CceEEEEECcCCChhH
Confidence            3477899999999999999999999999999999999999999998887531            1468899999999988


Q ss_pred             HHHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHH----HHHcCCCEEEEEccCCCCCCC
Q 016901          157 IEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDA----ATIAKVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       157 ~~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a----~~~~~v~r~V~~SS~~~~~~~  219 (380)
                      +.++..       .+|++|||||......      .+..+++++|+.+...+..+    +.+.+.++||+++|.+...+.
T Consensus        71 ~~~l~~~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~  150 (265)
T COG0300          71 LERLEDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPT  150 (265)
T ss_pred             HHHHHHHHHhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCC
Confidence            887763       5999999999664332      22344588999987666555    456777899999998774432


Q ss_pred             CchhhhchhhHHHHHHHHHHHH-------HHHCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHH
Q 016901          220 FPAAILNLFWGVLLWKRKAEEA-------LIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELL  292 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~-------l~~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i  292 (380)
                            +....|++||...-.+       ++.+|+.++.|.||.+..+....   ......... .-..+++++|+|+..
T Consensus       151 ------p~~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~---~~~~~~~~~-~~~~~~~~~~va~~~  220 (265)
T COG0300         151 ------PYMAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDA---KGSDVYLLS-PGELVLSPEDVAEAA  220 (265)
T ss_pred             ------cchHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCccccccccc---ccccccccc-chhhccCHHHHHHHH
Confidence                  2345699999986533       34589999999999998763210   111111100 111368999999999


Q ss_pred             HHHHhCCC
Q 016901          293 ACMAKNRS  300 (380)
Q Consensus       293 ~~~l~~~~  300 (380)
                      +..+....
T Consensus       221 ~~~l~~~k  228 (265)
T COG0300         221 LKALEKGK  228 (265)
T ss_pred             HHHHhcCC
Confidence            99998865

>PRK06128 oxidoreductase; Provisional

Probab=99.88  E-value=1.9e-21  Score=183.90  Aligned_cols=220  Identities=15%  Similarity=0.127  Sum_probs=155.4

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCch--hHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCCh
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ--RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~  154 (380)
                      .+.+|+||||||+|+||+++++.|+++|++|++..|+.+  ..+...+.++..+             .++.++.+|++|.
T Consensus        52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~Dl~~~  118 (300)
T PRK06128         52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEG-------------RKAVALPGDLKDE  118 (300)
T ss_pred             ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcC-------------CeEEEEecCCCCH
Confidence            346789999999999999999999999999988877543  2333333333221             4678899999999


Q ss_pred             hcHHHHh-------cCCCEEEEccccCcc-------ccCCCCCcchhhHHHHHHHHHHHHHc--CCCEEEEEccCCCCCC
Q 016901          155 VQIEPAL-------GNASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKF  218 (380)
Q Consensus       155 ~~~~~a~-------~~~d~Vi~~Ag~~~~-------~~~~~~~~~~~nv~g~~~ll~a~~~~--~v~r~V~~SS~~~~~~  218 (380)
                      +++++++       +++|+||||||....       ...++...+++|+.|+.++++++...  .-++||++||......
T Consensus       119 ~~v~~~~~~~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~  198 (300)
T PRK06128        119 AFCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQP  198 (300)
T ss_pred             HHHHHHHHHHHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCC
Confidence            8877765       468999999995421       11234455889999999999998753  2258999999876432


Q ss_pred             CCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccccc--ccceeeccCCcccCCCCCHHHHH
Q 016901          219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE--THNITLSQEDTLFGGQVSNLQVA  289 (380)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~--~~~~~~~~~~~~~~~~i~~~DvA  289 (380)
                      .      .....|+.+|.+.+.+++       ..|+++++|+||++.+|......  .............+.+.+++|+|
T Consensus       199 ~------~~~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva  272 (300)
T PRK06128        199 S------PTLLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSETPMKRPGQPVEMA  272 (300)
T ss_pred             C------CCchhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCHHHHHHHhcCCCCCCCcCHHHHH
Confidence            1      223469999999987765       26999999999999988531100  00000001112234567999999


Q ss_pred             HHHHHHHhCCC-CccCcEEEEecCCCC
Q 016901          290 ELLACMAKNRS-LSYCKVVEVIAETTA  315 (380)
Q Consensus       290 ~~i~~~l~~~~-~~~~~~~ni~~~~~~  315 (380)
                      .+++.++.+.. ...+++|++.++...
T Consensus       273 ~~~~~l~s~~~~~~~G~~~~v~gg~~~  299 (300)
T PRK06128        273 PLYVLLASQESSYVTGEVFGVTGGLLL  299 (300)
T ss_pred             HHHHHHhCccccCccCcEEeeCCCEeC
Confidence            99999987643 346889999887643

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.88  E-value=1.9e-21  Score=178.42  Aligned_cols=215  Identities=13%  Similarity=0.079  Sum_probs=152.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +.+++++||||+|+||++++++|+++|++|++++|+.++...+...+..              ..++.++.+|++|++++
T Consensus         3 ~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--------------~~~~~~~~~D~~~~~~~   68 (251)
T PRK07231          3 LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA--------------GGRAIAVAADVSDEADV   68 (251)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc--------------CCeEEEEECCCCCHHHH
Confidence            3567999999999999999999999999999999998776665543321              14688999999999988


Q ss_pred             HHHhc-------CCCEEEEccccCcccc-------CCCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCCC
Q 016901          158 EPALG-------NASVVICCIGASEKEV-------FDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~~~~-------~~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~~  219 (380)
                      .+++.       ++|+||||||......       .++...+++|+.++.++++.+.    +.+.++||++||.+.... 
T Consensus        69 ~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-  147 (251)
T PRK07231         69 EAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRP-  147 (251)
T ss_pred             HHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCC-
Confidence            87763       5799999998642211       1223447789988777776654    456789999999866432 


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccc----c-ceeeccCCcccCCCCCHHH
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET----H-NITLSQEDTLFGGQVSNLQ  287 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~----~-~~~~~~~~~~~~~~i~~~D  287 (380)
                           ......|+.+|...+.+++       ..++++++++||.+.++.......    . ...+.. ....+.+++++|
T Consensus       148 -----~~~~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d  221 (251)
T PRK07231        148 -----RPGLGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLA-TIPLGRLGTPED  221 (251)
T ss_pred             -----CCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhc-CCCCCCCcCHHH
Confidence                 1234569999999887665       248999999999997764211100    0 000111 112345789999


Q ss_pred             HHHHHHHHHhCCC-CccCcEEEEecCC
Q 016901          288 VAELLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       288 vA~~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      +|.+++.++.... ...+..+.+.++.
T Consensus       222 va~~~~~l~~~~~~~~~g~~~~~~gg~  248 (251)
T PRK07231        222 IANAALFLASDEASWITGVTLVVDGGR  248 (251)
T ss_pred             HHHHHHHHhCccccCCCCCeEEECCCc
Confidence            9999999997543 2346777776654

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.88  E-value=1.3e-21  Score=219.84  Aligned_cols=242  Identities=22%  Similarity=0.173  Sum_probs=170.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC----CeEEEEeCCchhHHHHH---HHHHhhhhcccccccCCCCCCceEEEEcCC
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLG----FRVRAGVRSVQRAENLV---QSVKQMKLDGELANKGIQPVEMLELVECDL  151 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G----~~V~~l~R~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl  151 (380)
                      ..++|+|||||||||++++++|+++|    ++|++++|+........   .....+++-      ......+++++.+|+
T Consensus       970 ~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~------~~~~~~~i~~~~gDl 1043 (1389)
T TIGR03443       970 TPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIW------DEEWASRIEVVLGDL 1043 (1389)
T ss_pred             CCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCC------chhhhcceEEEeccC
Confidence            45799999999999999999999987    89999999865433322   222222110      011124799999999


Q ss_pred             CCh------hcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCC-------
Q 016901          152 EKR------VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKF-------  218 (380)
Q Consensus       152 ~d~------~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~-------  218 (380)
                      +++      +.+.++..++|+|||||+..... .........|+.|+.+++++|.+.++++|+|+||.+++..       
T Consensus      1044 ~~~~lgl~~~~~~~l~~~~d~iiH~Aa~~~~~-~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~~ 1122 (1389)
T TIGR03443      1044 SKEKFGLSDEKWSDLTNEVDVIIHNGALVHWV-YPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVNLS 1122 (1389)
T ss_pred             CCccCCcCHHHHHHHHhcCCEEEECCcEecCc-cCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccchh
Confidence            754      55677778999999999876422 2223334579999999999999988999999999866421       


Q ss_pred             ---------CCchh------hhchhhHHHHHHHHHHHHHHH---CCCCEEEEecCcccCCCccccc--ccce--------
Q 016901          219 ---------GFPAA------ILNLFWGVLLWKRKAEEALIA---SGLPYTIVRPGGMERPTDAYKE--THNI--------  270 (380)
Q Consensus       219 ---------~~~~~------~~~~~~~Y~~sK~~~E~~l~~---~g~~~~ivRpg~v~gp~~~~~~--~~~~--------  270 (380)
                               +.++.      ......+|+.+|+.+|.++..   .|++++++|||.|+|+......  ...+        
T Consensus      1123 ~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~ 1202 (1389)
T TIGR03443      1123 DELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCI 1202 (1389)
T ss_pred             hhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHhCCCCEEEECCCccccCCCcCCCCchhHHHHHHHHHH
Confidence                     00110      111235699999999999864   6899999999999998542210  0000        


Q ss_pred             eecc--CCcccCCCCCHHHHHHHHHHHHhCCCC-ccCcEEEEecCCCCCcchHHHHHHhc
Q 016901          271 TLSQ--EDTLFGGQVSNLQVAELLACMAKNRSL-SYCKVVEVIAETTAPLTPMEELLAKI  327 (380)
Q Consensus       271 ~~~~--~~~~~~~~i~~~DvA~~i~~~l~~~~~-~~~~~~ni~~~~~~s~~~~~e~~~~~  327 (380)
                      .++.  .......+++++|+|++++.++.++.. ..+.+||++++...++.++.+.+.+.
T Consensus      1203 ~~~~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~ 1262 (1389)
T TIGR03443      1203 QLGLIPNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPRIRFNDFLGTLKTY 1262 (1389)
T ss_pred             HhCCcCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCCCcHHHHHHHHHHh
Confidence            0011  111123689999999999999876542 23568999999988999999998765

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.88  E-value=1.1e-21  Score=181.58  Aligned_cols=216  Identities=15%  Similarity=0.128  Sum_probs=152.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      ++++++|||||+|+||++++++|+++|++|++++|+.+..+.+.+...+               .++.++.+|++|++++
T Consensus         9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~---------------~~~~~~~~D~~~~~~~   73 (264)
T PRK12829          9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPG---------------AKVTATVADVADPAQV   73 (264)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc---------------CceEEEEccCCCHHHH
Confidence            4668999999999999999999999999999999987766554432211               2578899999999888


Q ss_pred             HHHh-------cCCCEEEEccccC-cccc------CCCCCcchhhHHHHHHHHHHHH----HcCC-CEEEEEccCCCCCC
Q 016901          158 EPAL-------GNASVVICCIGAS-EKEV------FDITGPYRIDFQATKNLVDAAT----IAKV-NHFIMVSSLGTNKF  218 (380)
Q Consensus       158 ~~a~-------~~~d~Vi~~Ag~~-~~~~------~~~~~~~~~nv~g~~~ll~a~~----~~~v-~r~V~~SS~~~~~~  218 (380)
                      .+++       .++|+|||+||.. ....      .++...+++|+.++.++++++.    ..+. ++|+++||.+... 
T Consensus        74 ~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~-  152 (264)
T PRK12829         74 ERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRL-  152 (264)
T ss_pred             HHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEeccccccc-
Confidence            7766       4789999999965 2111      1223447889999999888773    3444 5788888765422 


Q ss_pred             CCchhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCccccccc-----ceee---c---cCCcccC
Q 016901          219 GFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETH-----NITL---S---QEDTLFG  280 (380)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~~~-----~~~~---~---~~~~~~~  280 (380)
                      +.     .....|+.+|.+.|.+++.       .++++++||||++++|........     ....   .   .......
T Consensus       153 ~~-----~~~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (264)
T PRK12829        153 GY-----PGRTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLG  227 (264)
T ss_pred             CC-----CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHhcCCCC
Confidence            11     1234699999999887653       589999999999999853211000     0000   0   0011123


Q ss_pred             CCCCHHHHHHHHHHHHhCC-CCccCcEEEEecCCC
Q 016901          281 GQVSNLQVAELLACMAKNR-SLSYCKVVEVIAETT  314 (380)
Q Consensus       281 ~~i~~~DvA~~i~~~l~~~-~~~~~~~~ni~~~~~  314 (380)
                      .+++++|+|+++..++... ....++.|++.++..
T Consensus       228 ~~~~~~d~a~~~~~l~~~~~~~~~g~~~~i~~g~~  262 (264)
T PRK12829        228 RMVEPEDIAATALFLASPAARYITGQAISVDGNVE  262 (264)
T ss_pred             CCCCHHHHHHHHHHHcCccccCccCcEEEeCCCcc
Confidence            4799999999999888643 224588999988763

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.88  E-value=2.3e-21  Score=177.56  Aligned_cols=215  Identities=14%  Similarity=0.115  Sum_probs=150.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCc----hhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCC
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV----QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK  153 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d  153 (380)
                      +++|+++||||+|+||+++++.|+++|++|+++.|..    +....+.+.+...             ..+++++.+|++|
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~Dl~~   70 (249)
T PRK12827          4 LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAA-------------GGKALGLAFDVRD   70 (249)
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhc-------------CCcEEEEEccCCC
Confidence            3568999999999999999999999999999977643    3333333322211             1568899999999


Q ss_pred             hhcHHHHh-------cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHH-----HcCCCEEEEEccCCC
Q 016901          154 RVQIEPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT-----IAKVNHFIMVSSLGT  215 (380)
Q Consensus       154 ~~~~~~a~-------~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~-----~~~v~r~V~~SS~~~  215 (380)
                      .+++.+++       .++|+||||||......      .++...+++|+.++.++++++.     +.+.++||++||.+.
T Consensus        71 ~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~  150 (249)
T PRK12827         71 FAATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAG  150 (249)
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchh
Confidence            98888776       46899999999654211      1223447899999999999987     456679999999766


Q ss_pred             CCCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHH
Q 016901          216 NKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQV  288 (380)
Q Consensus       216 ~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~Dv  288 (380)
                      ....      .....|+.+|.+.+.+++       ..+++++++|||++.++.......... .. .......+.+++|+
T Consensus       151 ~~~~------~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~-~~-~~~~~~~~~~~~~v  222 (249)
T PRK12827        151 VRGN------RGQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPTEH-LL-NPVPVQRLGEPDEV  222 (249)
T ss_pred             cCCC------CCCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchHHH-HH-hhCCCcCCcCHHHH
Confidence            4321      233469999998887655       258999999999999874321110000 00 01112234589999


Q ss_pred             HHHHHHHHhCCC-CccCcEEEEecCC
Q 016901          289 AELLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       289 A~~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      |++++.++.+.. ...++.+++.++.
T Consensus       223 a~~~~~l~~~~~~~~~g~~~~~~~g~  248 (249)
T PRK12827        223 AALVAFLVSDAASYVTGQVIPVDGGF  248 (249)
T ss_pred             HHHHHHHcCcccCCccCcEEEeCCCC
Confidence            999999886543 2357788887653

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.88  E-value=1.8e-21  Score=179.89  Aligned_cols=214  Identities=17%  Similarity=0.124  Sum_probs=146.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +.+++++||||+|+||++++++|+++|++|++++|+.. ...+.+.+...             ..++.++.+|++|.+++
T Consensus         6 ~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~~   71 (260)
T PRK12823          6 FAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAA-------------GGEALALTADLETYAGA   71 (260)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhc-------------CCeEEEEEEeCCCHHHH
Confidence            46789999999999999999999999999999999853 23333322211             14678899999998877


Q ss_pred             HHHh-------cCCCEEEEccccCcc-c------cCCCCCcchhhHHHHHHHH----HHHHHcCCCEEEEEccCCCCCCC
Q 016901          158 EPAL-------GNASVVICCIGASEK-E------VFDITGPYRIDFQATKNLV----DAATIAKVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       158 ~~a~-------~~~d~Vi~~Ag~~~~-~------~~~~~~~~~~nv~g~~~ll----~a~~~~~v~r~V~~SS~~~~~~~  219 (380)
                      .+++       +++|+||||||.... .      ..++...+++|+.++..++    +.+++.+.++||++||...... 
T Consensus        72 ~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-  150 (260)
T PRK12823         72 QAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRGI-  150 (260)
T ss_pred             HHHHHHHHHHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccCC-
Confidence            7665       368999999984311 1      1112233678888876554    4445566779999999765321 


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcccc-------cccceee------ccCCccc
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-------ETHNITL------SQEDTLF  279 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~-------~~~~~~~------~~~~~~~  279 (380)
                             ....|+.+|.+.+.+++.       .|+++++|+||++++|.....       .......      .......
T Consensus       151 -------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (260)
T PRK12823        151 -------NRVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLM  223 (260)
T ss_pred             -------CCCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCc
Confidence                   123699999999987652       589999999999999732110       0000000      0011122


Q ss_pred             CCCCCHHHHHHHHHHHHhCCC-CccCcEEEEecCC
Q 016901          280 GGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       280 ~~~i~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      +.+.+++|+|++++.++.+.. ...+++|++.+++
T Consensus       224 ~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~  258 (260)
T PRK12823        224 KRYGTIDEQVAAILFLASDEASYITGTVLPVGGGD  258 (260)
T ss_pred             ccCCCHHHHHHHHHHHcCcccccccCcEEeecCCC
Confidence            335689999999999987642 2457889888775

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.88  E-value=4.6e-21  Score=174.95  Aligned_cols=197  Identities=14%  Similarity=0.094  Sum_probs=146.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++++++||||+|+||++++++|+++|++|++++|+..+..+..+.+...+             .++.++.+|++|++++
T Consensus         5 ~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~D~~~~~~~   71 (239)
T PRK07666          5 LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYG-------------VKVVIATADVSDYEEV   71 (239)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhC-------------CeEEEEECCCCCHHHH
Confidence            456899999999999999999999999999999999877666555443211             4788999999999988


Q ss_pred             HHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCCCC
Q 016901          158 EPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~~~  220 (380)
                      .++++       ++|+||||+|......      .++...+++|+.++.++++++.    +.+.+++|++||....... 
T Consensus        72 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~-  150 (239)
T PRK07666         72 TAAIEQLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGA-  150 (239)
T ss_pred             HHHHHHHHHHcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCC-
Confidence            87774       7999999998643211      1223457899999988888775    4556789999997653321 


Q ss_pred             chhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHH
Q 016901          221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA  293 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~  293 (380)
                           .....|+.+|.+.+.+++       ..|+++++||||++.++.....   .  ...  ......++++|+|+.+.
T Consensus       151 -----~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~---~--~~~--~~~~~~~~~~~~a~~~~  218 (239)
T PRK07666        151 -----AVTSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDL---G--LTD--GNPDKVMQPEDLAEFIV  218 (239)
T ss_pred             -----CCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhc---c--ccc--cCCCCCCCHHHHHHHHH
Confidence                 223469999998887654       3689999999999987732110   0  111  11234689999999999


Q ss_pred             HHHhCCC
Q 016901          294 CMAKNRS  300 (380)
Q Consensus       294 ~~l~~~~  300 (380)
                      .++.++.
T Consensus       219 ~~l~~~~  225 (239)
T PRK07666        219 AQLKLNK  225 (239)
T ss_pred             HHHhCCC
Confidence            9998764

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.88  E-value=2e-21  Score=179.28  Aligned_cols=216  Identities=13%  Similarity=0.111  Sum_probs=153.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      .+++|+||||+|+||++++++|+++|++|++++|++...+.+...+...+             .++.++.+|++|.++++
T Consensus         4 ~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~D~~~~~~~~   70 (258)
T PRK07890          4 KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLG-------------RRALAVPTDITDEDQCA   70 (258)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhC-------------CceEEEecCCCCHHHHH
Confidence            56899999999999999999999999999999999877666655443221             46889999999998877


Q ss_pred             HHh-------cCCCEEEEccccCcc-c------cCCCCCcchhhHHHHHHHHHHHHHc---CCCEEEEEccCCCCCCCCc
Q 016901          159 PAL-------GNASVVICCIGASEK-E------VFDITGPYRIDFQATKNLVDAATIA---KVNHFIMVSSLGTNKFGFP  221 (380)
Q Consensus       159 ~a~-------~~~d~Vi~~Ag~~~~-~------~~~~~~~~~~nv~g~~~ll~a~~~~---~v~r~V~~SS~~~~~~~~~  221 (380)
                      .++       +++|+||||||.... .      ..++...+++|+.++..+++++...   ..++||++||......   
T Consensus        71 ~~~~~~~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~---  147 (258)
T PRK07890         71 NLVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHS---  147 (258)
T ss_pred             HHHHHHHHHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccC---
Confidence            665       468999999986422 1      1123344789999999999988642   2358999999765322   


Q ss_pred             hhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcccc-cc----ccee----ec--cCCcccCCCC
Q 016901          222 AAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-ET----HNIT----LS--QEDTLFGGQV  283 (380)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~-~~----~~~~----~~--~~~~~~~~~i  283 (380)
                         ......|+.+|.+.+.+++.       .++++++++||.+++|..... ..    ....    ..  ......+.+.
T Consensus       148 ---~~~~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (258)
T PRK07890        148 ---QPKYGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLP  224 (258)
T ss_pred             ---CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcCCccccC
Confidence               12345699999999987762       589999999999999853110 00    0000    00  0111223467


Q ss_pred             CHHHHHHHHHHHHhCCC-CccCcEEEEecCC
Q 016901          284 SNLQVAELLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       284 ~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      +++|+|++++.++.... ...++++.+.++.
T Consensus       225 ~~~dva~a~~~l~~~~~~~~~G~~i~~~gg~  255 (258)
T PRK07890        225 TDDEVASAVLFLASDLARAITGQTLDVNCGE  255 (258)
T ss_pred             CHHHHHHHHHHHcCHhhhCccCcEEEeCCcc
Confidence            89999999999887532 2456766665554

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.88  E-value=4e-21  Score=177.05  Aligned_cols=216  Identities=17%  Similarity=0.132  Sum_probs=150.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCch-hHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ-RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      +|+|+||||+|+||+++++.|+++|++|++++|+.. ......+.++..             ..++.++.+|++|.+++.
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~~~   68 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRAL-------------GVEVIFFPADVADLSAHE   68 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhc-------------CCceEEEEecCCCHHHHH
Confidence            468999999999999999999999999999998643 333332222211             146889999999988877


Q ss_pred             HHh-------cCCCEEEEccccCcccc--------CCCCCcchhhHHHHHHHHHHHHHc-----C-----CCEEEEEccC
Q 016901          159 PAL-------GNASVVICCIGASEKEV--------FDITGPYRIDFQATKNLVDAATIA-----K-----VNHFIMVSSL  213 (380)
Q Consensus       159 ~a~-------~~~d~Vi~~Ag~~~~~~--------~~~~~~~~~nv~g~~~ll~a~~~~-----~-----v~r~V~~SS~  213 (380)
                      +++       +.+|+||||||......        .+++..+++|+.++.++++++...     +     +++||++||.
T Consensus        69 ~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~  148 (256)
T PRK12745         69 AMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSV  148 (256)
T ss_pred             HHHHHHHHhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECCh
Confidence            665       36899999998642211        123344789999999998887432     1     5689999997


Q ss_pred             CCCCCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccccccc-ceeeccCCcccCCCCCH
Q 016901          214 GTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH-NITLSQEDTLFGGQVSN  285 (380)
Q Consensus       214 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~-~~~~~~~~~~~~~~i~~  285 (380)
                      ......      .....|+.+|.+.|.+++       .+|+++++|+||.++++........ ...+.........+.++
T Consensus       149 ~~~~~~------~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (256)
T PRK12745        149 NAIMVS------PNRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTAKYDALIAKGLVPMPRWGEP  222 (256)
T ss_pred             hhccCC------CCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccchhHHhhhhhcCCCcCCCcCH
Confidence            653321      223469999999987765       3789999999999998743211100 00011111123356799


Q ss_pred             HHHHHHHHHHHhCCC-CccCcEEEEecCCC
Q 016901          286 LQVAELLACMAKNRS-LSYCKVVEVIAETT  314 (380)
Q Consensus       286 ~DvA~~i~~~l~~~~-~~~~~~~ni~~~~~  314 (380)
                      +|+++++..++.... ...|.+|++.++..
T Consensus       223 ~d~a~~i~~l~~~~~~~~~G~~~~i~gg~~  252 (256)
T PRK12745        223 EDVARAVAALASGDLPYSTGQAIHVDGGLS  252 (256)
T ss_pred             HHHHHHHHHHhCCcccccCCCEEEECCCee
Confidence            999999999886542 23578999988754

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.88  E-value=1.2e-20  Score=172.59  Aligned_cols=217  Identities=17%  Similarity=0.151  Sum_probs=149.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchh-HHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR-AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      +++++++||||||+||+++++.|+++|++|+++.|+..+ .....+.+...             ..++.++.+|++|.++
T Consensus         3 ~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~Dl~~~~~   69 (248)
T PRK05557          3 LEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGAL-------------GGKALAVQGDVSDAES   69 (248)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc-------------CCceEEEEcCCCCHHH
Confidence            356899999999999999999999999999888887653 33333323211             1568899999999988


Q ss_pred             HHHHhc-------CCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHHHH----cCCCEEEEEccCCCCCCC
Q 016901          157 IEPALG-------NASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       157 ~~~a~~-------~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~~~----~~v~r~V~~SS~~~~~~~  219 (380)
                      +.++++       ++|+||||||.......      .+...+++|+.++.++++++..    .+.++||++||..... +
T Consensus        70 ~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~-~  148 (248)
T PRK05557         70 VERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLM-G  148 (248)
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCc-C
Confidence            877664       68999999986533211      1223367899999998888764    3567899999974422 2


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHH
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELL  292 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i  292 (380)
                      .     .....|+.+|.+.+.+++       ..++++++++||.+.++...................+.+++++|+|+++
T Consensus       149 ~-----~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~  223 (248)
T PRK05557        149 N-----PGQANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDALPEDVKEAILAQIPLGRLGQPEEIASAV  223 (248)
T ss_pred             C-----CCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccccChHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            1     123469999998886654       3689999999999876532111000000001111223468999999999


Q ss_pred             HHHHhCCC-CccCcEEEEecCC
Q 016901          293 ACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       293 ~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      ..++.... ...+++|++.++.
T Consensus       224 ~~l~~~~~~~~~g~~~~i~~~~  245 (248)
T PRK05557        224 AFLASDEAAYITGQTLHVNGGM  245 (248)
T ss_pred             HHHcCcccCCccccEEEecCCc
Confidence            98887622 2457899998764

>PRK09186 flagellin modification protein A; Provisional

Probab=99.88  E-value=2e-21  Score=179.09  Aligned_cols=220  Identities=16%  Similarity=0.121  Sum_probs=148.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ++|+|+||||+|+||+++++.|+++|++|+++.|++++.+...+.+....           ....+.++++|++|++++.
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~-----------~~~~~~~~~~Dl~d~~~~~   71 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEF-----------KSKKLSLVELDITDQESLE   71 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhc-----------CCCceeEEEecCCCHHHHH
Confidence            57899999999999999999999999999999999887766655443210           0135677899999998888


Q ss_pred             HHhc-------CCCEEEEccccCcccc---------CCCCCcchhhHHHHHHHHH----HHHHcCCCEEEEEccCCCCCC
Q 016901          159 PALG-------NASVVICCIGASEKEV---------FDITGPYRIDFQATKNLVD----AATIAKVNHFIMVSSLGTNKF  218 (380)
Q Consensus       159 ~a~~-------~~d~Vi~~Ag~~~~~~---------~~~~~~~~~nv~g~~~ll~----a~~~~~v~r~V~~SS~~~~~~  218 (380)
                      ++++       ++|+|||||+......         ..+...+++|+.++..+++    ++++.+.++||++||......
T Consensus        72 ~~~~~~~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~  151 (256)
T PRK09186         72 EFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVA  151 (256)
T ss_pred             HHHHHHHHHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhcc
Confidence            7774       3899999997532111         1122335678777665554    445567789999999654211


Q ss_pred             -CC---chhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHH
Q 016901          219 -GF---PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQ  287 (380)
Q Consensus       219 -~~---~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~D  287 (380)
                       ..   ..........|+.+|...+.+.+       ..|+++++++||.++++...... .  ... ........++++|
T Consensus       152 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~~~~-~--~~~-~~~~~~~~~~~~d  227 (256)
T PRK09186        152 PKFEIYEGTSMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPEAFL-N--AYK-KCCNGKGMLDPDD  227 (256)
T ss_pred             ccchhccccccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCHHHH-H--HHH-hcCCccCCCCHHH
Confidence             10   11111122359999999987764       36899999999999865321000 0  000 0111235799999


Q ss_pred             HHHHHHHHHhCCC-CccCcEEEEecCC
Q 016901          288 VAELLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       288 vA~~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      +|++++.++.+.. ...+.++.+.++.
T Consensus       228 va~~~~~l~~~~~~~~~g~~~~~~~g~  254 (256)
T PRK09186        228 ICGTLVFLLSDQSKYITGQNIIVDDGF  254 (256)
T ss_pred             hhhhHhheeccccccccCceEEecCCc
Confidence            9999999997643 2357777776653

>PLN02253 xanthoxin dehydrogenase

Probab=99.87  E-value=4e-21  Score=179.73  Aligned_cols=222  Identities=14%  Similarity=0.099  Sum_probs=155.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++|+++||||+|+||++++++|+++|++|++++|+.+..+++.+.+.              ...++.++++|++|.+++
T Consensus        16 l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~Dl~d~~~~   81 (280)
T PLN02253         16 LLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLG--------------GEPNVCFFHCDVTVEDDV   81 (280)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhc--------------CCCceEEEEeecCCHHHH
Confidence            467899999999999999999999999999999998766555443221              114688999999999888


Q ss_pred             HHHhc-------CCCEEEEccccCccc--------cCCCCCcchhhHHHHHHHHHHHHH----cCCCEEEEEccCCCCCC
Q 016901          158 EPALG-------NASVVICCIGASEKE--------VFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKF  218 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~~~--------~~~~~~~~~~nv~g~~~ll~a~~~----~~v~r~V~~SS~~~~~~  218 (380)
                      +++++       ++|+||||||.....        ..++...+++|+.|+.++++++..    .+.+++|++||......
T Consensus        82 ~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~  161 (280)
T PLN02253         82 SRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIG  161 (280)
T ss_pred             HHHHHHHHHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhccc
Confidence            87774       699999999864321        112344588999999998887753    34468999998655322


Q ss_pred             CCchhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCccc--cccc---ce------eeccCCcccC
Q 016901          219 GFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAY--KETH---NI------TLSQEDTLFG  280 (380)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~--~~~~---~~------~~~~~~~~~~  280 (380)
                      .      .....|+.+|.+.|.+++.       .|+++++++||.+.++....  ....   ..      .........+
T Consensus       162 ~------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  235 (280)
T PLN02253        162 G------LGPHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKG  235 (280)
T ss_pred             C------CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCCCcC
Confidence            1      1123699999999988752       58999999999998763211  0000   00      0000111112


Q ss_pred             CCCCHHHHHHHHHHHHhCCC-CccCcEEEEecCCCCCcch
Q 016901          281 GQVSNLQVAELLACMAKNRS-LSYCKVVEVIAETTAPLTP  319 (380)
Q Consensus       281 ~~i~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~~~s~~~  319 (380)
                      ..++++|+|+++..++.+.. ...+..+++.++...+..+
T Consensus       236 ~~~~~~dva~~~~~l~s~~~~~i~G~~i~vdgG~~~~~~~  275 (280)
T PLN02253        236 VELTVDDVANAVLFLASDEARYISGLNLMIDGGFTCTNHS  275 (280)
T ss_pred             CCCCHHHHHHHHHhhcCcccccccCcEEEECCchhhccch
Confidence            34799999999999987543 3457888888776544433

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.87  E-value=9.9e-21  Score=173.91  Aligned_cols=214  Identities=15%  Similarity=0.091  Sum_probs=151.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ++++++||||+|+||++++++|+++|++|+++.|+.+......+.+. .             ..++.++++|++|++++.
T Consensus         4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~-------------~~~~~~~~~D~~~~~~~~   69 (252)
T PRK06138          4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA-A-------------GGRAFARQGDVGSAEAVE   69 (252)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh-c-------------CCeEEEEEcCCCCHHHHH
Confidence            56899999999999999999999999999999999876655444332 1             146889999999999888


Q ss_pred             HHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCCCCc
Q 016901          159 PALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGFP  221 (380)
Q Consensus       159 ~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~~~~  221 (380)
                      ++++       ++|+||||+|......      .++...+++|+.++.++.+++    ++.+.++||++||.+.....  
T Consensus        70 ~~~~~i~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~--  147 (252)
T PRK06138         70 ALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGG--  147 (252)
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCC--
Confidence            7763       6899999999643211      112333778999987766654    55677899999997553211  


Q ss_pred             hhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcccccccce------eeccCCcccCCCCCHHHH
Q 016901          222 AAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNI------TLSQEDTLFGGQVSNLQV  288 (380)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~~~~~------~~~~~~~~~~~~i~~~Dv  288 (380)
                          .....|+.+|.+.+.+++.       .|++++++|||+++++..........      ...........+++++|+
T Consensus       148 ----~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  223 (252)
T PRK06138        148 ----RGRAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHPMNRFGTAEEV  223 (252)
T ss_pred             ----CCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhcCCCCCCcCHHHH
Confidence                2235699999999877652       58999999999999885321100000      000011122347899999


Q ss_pred             HHHHHHHHhCCC-CccCcEEEEecC
Q 016901          289 AELLACMAKNRS-LSYCKVVEVIAE  312 (380)
Q Consensus       289 A~~i~~~l~~~~-~~~~~~~ni~~~  312 (380)
                      |++++.++.++. ...|..+.+.++
T Consensus       224 a~~~~~l~~~~~~~~~g~~~~~~~g  248 (252)
T PRK06138        224 AQAALFLASDESSFATGTTLVVDGG  248 (252)
T ss_pred             HHHHHHHcCchhcCccCCEEEECCC
Confidence            999999998754 234666766554

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.87  E-value=1.3e-20  Score=173.21  Aligned_cols=217  Identities=16%  Similarity=0.106  Sum_probs=151.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCc-hhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV-QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      +.+++||||||+|+||++++++|+++|++|++..|+. .........++..             ..++.++.+|+++.++
T Consensus         4 ~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~   70 (252)
T PRK06077          4 LKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKEN-------------GGEGIGVLADVSTREG   70 (252)
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHc-------------CCeeEEEEeccCCHHH
Confidence            3568999999999999999999999999998877643 3333322222221             1457788999999887


Q ss_pred             HHHHh-------cCCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHHHHc--CCCEEEEEccCCCCCCCCc
Q 016901          157 IEPAL-------GNASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFP  221 (380)
Q Consensus       157 ~~~a~-------~~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~~~~--~v~r~V~~SS~~~~~~~~~  221 (380)
                      +..++       .++|+||||||.......      ..+..+++|+.++.++++++.+.  ..++||++||......   
T Consensus        71 ~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~---  147 (252)
T PRK06077         71 CETLAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRP---  147 (252)
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCC---
Confidence            77665       368999999996432211      12344788999999988887643  2358999999765332   


Q ss_pred             hhhhchhhHHHHHHHHHHHHHHH------CCCCEEEEecCcccCCCcccc-cccce---eeccCCcccCCCCCHHHHHHH
Q 016901          222 AAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYK-ETHNI---TLSQEDTLFGGQVSNLQVAEL  291 (380)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~~------~g~~~~ivRpg~v~gp~~~~~-~~~~~---~~~~~~~~~~~~i~~~DvA~~  291 (380)
                         ..+...|+.+|...|.+++.      .++++.+++||++.++..... .....   .........+.+++++|+|++
T Consensus       148 ---~~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  224 (252)
T PRK06077        148 ---AYGLSIYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEKFTLMGKILDPEEVAEF  224 (252)
T ss_pred             ---CCCchHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhcccccHHHHHHhcCcCCCCCCHHHHHHH
Confidence               23446799999999988762      379999999999987743110 00000   001111223467999999999


Q ss_pred             HHHHHhCCCCccCcEEEEecCCC
Q 016901          292 LACMAKNRSLSYCKVVEVIAETT  314 (380)
Q Consensus       292 i~~~l~~~~~~~~~~~ni~~~~~  314 (380)
                      ++.++..+. ..+++|++.++..
T Consensus       225 ~~~~~~~~~-~~g~~~~i~~g~~  246 (252)
T PRK06077        225 VAAILKIES-ITGQVFVLDSGES  246 (252)
T ss_pred             HHHHhCccc-cCCCeEEecCCee
Confidence            999997654 5688999998864

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.87  E-value=1e-20  Score=172.31  Aligned_cols=209  Identities=15%  Similarity=0.134  Sum_probs=152.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +.+++|+||||+|+||++++++|+++|++|++++|++.+...+.+.+...              .++.++.+|++|.+++
T Consensus         4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~--------------~~~~~~~~D~~~~~~~   69 (237)
T PRK07326          4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK--------------GNVLGLAADVRDEADV   69 (237)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc--------------CcEEEEEccCCCHHHH
Confidence            35689999999999999999999999999999999987766655443211              4688999999999888


Q ss_pred             HHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHHH---cCCCEEEEEccCCCCCCCCc
Q 016901          158 EPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATI---AKVNHFIMVSSLGTNKFGFP  221 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~~---~~v~r~V~~SS~~~~~~~~~  221 (380)
                      .++++       ++|+|||++|......      .++...+++|+.++.++++++.+   .+.+++|++||......   
T Consensus        70 ~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~---  146 (237)
T PRK07326         70 QRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNF---  146 (237)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccC---
Confidence            77664       7999999998643211      11234478899999998888753   34568999999755321   


Q ss_pred             hhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHH
Q 016901          222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLAC  294 (380)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~  294 (380)
                         ......|..+|++.+.+.+       ..|+++++||||++.++.....     .  ...  ....++++|+++.++.
T Consensus       147 ---~~~~~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~-----~--~~~--~~~~~~~~d~a~~~~~  214 (237)
T PRK07326        147 ---FAGGAAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHT-----P--SEK--DAWKIQPEDIAQLVLD  214 (237)
T ss_pred             ---CCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCcccccc-----c--chh--hhccCCHHHHHHHHHH
Confidence               1223469999998776654       2689999999999987632110     0  000  1124899999999999


Q ss_pred             HHhCCCCccCcEEEEecCCCC
Q 016901          295 MAKNRSLSYCKVVEVIAETTA  315 (380)
Q Consensus       295 ~l~~~~~~~~~~~ni~~~~~~  315 (380)
                      ++..+.......+++.+++..
T Consensus       215 ~l~~~~~~~~~~~~~~~~~~~  235 (237)
T PRK07326        215 LLKMPPRTLPSKIEVRPSRPP  235 (237)
T ss_pred             HHhCCccccccceEEecCCCC
Confidence            998877556667777655543

>PRK05717 oxidoreductase; Validated

Probab=99.87  E-value=6.1e-21  Score=176.01  Aligned_cols=215  Identities=13%  Similarity=0.140  Sum_probs=150.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      +.++++++||||+|+||+++++.|+++|++|++++|+..+..+..+.+                ..++.++++|++|.++
T Consensus         7 ~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~----------------~~~~~~~~~Dl~~~~~   70 (255)
T PRK05717          7 GHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL----------------GENAWFIAMDVADEAQ   70 (255)
T ss_pred             ccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc----------------CCceEEEEccCCCHHH
Confidence            346789999999999999999999999999999999876554433211                1468899999999887


Q ss_pred             HHHHh-------cCCCEEEEccccCccc--c------CCCCCcchhhHHHHHHHHHHHHH---cCCCEEEEEccCCCCCC
Q 016901          157 IEPAL-------GNASVVICCIGASEKE--V------FDITGPYRIDFQATKNLVDAATI---AKVNHFIMVSSLGTNKF  218 (380)
Q Consensus       157 ~~~a~-------~~~d~Vi~~Ag~~~~~--~------~~~~~~~~~nv~g~~~ll~a~~~---~~v~r~V~~SS~~~~~~  218 (380)
                      +.+++       +.+|+||||||.....  .      .++...+++|+.++.++++++..   ...+++|++||......
T Consensus        71 ~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~  150 (255)
T PRK05717         71 VAAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQS  150 (255)
T ss_pred             HHHHHHHHHHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCC
Confidence            76554       3589999999965321  1      12234578999999999999863   22368999999765322


Q ss_pred             CCchhhhchhhHHHHHHHHHHHHHHH------CCCCEEEEecCcccCCCcccccccce-eeccCCcccCCCCCHHHHHHH
Q 016901          219 GFPAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKETHNI-TLSQEDTLFGGQVSNLQVAEL  291 (380)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~~------~g~~~~ivRpg~v~gp~~~~~~~~~~-~~~~~~~~~~~~i~~~DvA~~  291 (380)
                      .      .....|+.+|.+.+.+++.      .++++++|+||++.++.......... .........+...+++|+|.+
T Consensus       151 ~------~~~~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~  224 (255)
T PRK05717        151 E------PDTEAYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQRRAEPLSEADHAQHPAGRVGTVEDVAAM  224 (255)
T ss_pred             C------CCCcchHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCccccccchHHHHHHhhcCCCCCCcCHHHHHHH
Confidence            1      1234699999999987762      35999999999999874321100000 000111122456799999999


Q ss_pred             HHHHHhCCC-CccCcEEEEecCC
Q 016901          292 LACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       292 i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      +..++.+.. ...++.+.+.++.
T Consensus       225 ~~~l~~~~~~~~~g~~~~~~gg~  247 (255)
T PRK05717        225 VAWLLSRQAGFVTGQEFVVDGGM  247 (255)
T ss_pred             HHHHcCchhcCccCcEEEECCCc
Confidence            998886542 2357777776553

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.87  E-value=6e-21  Score=175.90  Aligned_cols=218  Identities=11%  Similarity=0.111  Sum_probs=153.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++++++||||+|+||.+++++|+++|++|++++|++++.+.+.+.++..+             .++.++.+|++|++++
T Consensus         4 ~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~D~~~~~~~   70 (254)
T PRK07478          4 LNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEG-------------GEAVALAGDVRDEAYA   70 (254)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------------CcEEEEEcCCCCHHHH
Confidence            456899999999999999999999999999999999887776665544321             4688899999999888


Q ss_pred             HHHhc-------CCCEEEEccccCcc-cc------CCCCCcchhhHHHHHHHHHH----HHHcCCCEEEEEccCCCCCCC
Q 016901          158 EPALG-------NASVVICCIGASEK-EV------FDITGPYRIDFQATKNLVDA----ATIAKVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~~-~~------~~~~~~~~~nv~g~~~ll~a----~~~~~v~r~V~~SS~~~~~~~  219 (380)
                      +++++       .+|+||||||.... ..      .++...+++|+.++..++++    +++.+.++||++||.......
T Consensus        71 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~  150 (254)
T PRK07478         71 KALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAG  150 (254)
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccC
Confidence            77763       68999999996421 11      12344578999887766554    455566789999997543211


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccccccc-ce-eeccCCcccCCCCCHHHHHH
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH-NI-TLSQEDTLFGGQVSNLQVAE  290 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~-~~-~~~~~~~~~~~~i~~~DvA~  290 (380)
                           ......|+.+|.+.+.+++       ..|+++++|+||++.++........ .. .........+....++|+|+
T Consensus       151 -----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~  225 (254)
T PRK07478        151 -----FPGMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGLHALKRMAQPEEIAQ  225 (254)
T ss_pred             -----CCCcchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCHHHHHHHHhcCCCCCCcCHHHHHH
Confidence                 1233579999999987765       2589999999999987732111000 00 00011111234578999999


Q ss_pred             HHHHHHhCCC-CccCcEEEEecCC
Q 016901          291 LLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       291 ~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      .++.++.+.. ...|+++.+-++.
T Consensus       226 ~~~~l~s~~~~~~~G~~~~~dgg~  249 (254)
T PRK07478        226 AALFLASDAASFVTGTALLVDGGV  249 (254)
T ss_pred             HHHHHcCchhcCCCCCeEEeCCch
Confidence            9999987643 3457777776553

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.87  E-value=1.3e-20  Score=174.24  Aligned_cols=221  Identities=14%  Similarity=0.072  Sum_probs=153.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      ++++++|||||+|+||++++++|+++|++|++++|+.++.+...+.++..+             .++.++.+|++|++++
T Consensus        10 ~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~-------------~~~~~~~~Dl~d~~~i   76 (259)
T PRK08213         10 LSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALG-------------IDALWIAADVADEADI   76 (259)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC-------------CeEEEEEccCCCHHHH
Confidence            356899999999999999999999999999999999877666555443221             4678899999999888


Q ss_pred             HHHh-------cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHHHc-----CCCEEEEEccCCCCCCC
Q 016901          158 EPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIA-----KVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       158 ~~a~-------~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~~~-----~v~r~V~~SS~~~~~~~  219 (380)
                      ++++       .++|+||||||......      ..+...+++|+.++.++++++...     +.++||++||.+.....
T Consensus        77 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~  156 (259)
T PRK08213         77 ERLAEETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGN  156 (259)
T ss_pred             HHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCC
Confidence            6655       35899999998642211      112334679999999999987654     56799999997553221


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHH
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELL  292 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i  292 (380)
                      .+.  ..+..+|..+|+..|.+++.       +|+++++++||++.++.....................+...+|+|.++
T Consensus       157 ~~~--~~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~  234 (259)
T PRK08213        157 PPE--VMDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTLERLGEDLLAHTPLGRLGDDEDLKGAA  234 (259)
T ss_pred             Ccc--ccCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhhHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            111  12335799999999988762       589999999999987642110000000000111122345799999999


Q ss_pred             HHHHhCCC-CccCcEEEEecCC
Q 016901          293 ACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       293 ~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      ..++.... ...|+.+++.++.
T Consensus       235 ~~l~~~~~~~~~G~~~~~~~~~  256 (259)
T PRK08213        235 LLLASDASKHITGQILAVDGGV  256 (259)
T ss_pred             HHHhCccccCccCCEEEECCCe
Confidence            98886543 3457788776653

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.87  E-value=5.8e-21  Score=177.58  Aligned_cols=195  Identities=18%  Similarity=0.170  Sum_probs=142.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ++++|+||||+|+||++++++|+++|++|++++|++++...                     ..+++++++|++|+++++
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~---------------------~~~~~~~~~D~~d~~~~~   61 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP---------------------IPGVELLELDVTDDASVQ   61 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc---------------------cCCCeeEEeecCCHHHHH
Confidence            45789999999999999999999999999999998754322                     156889999999999888


Q ss_pred             HHhc-------CCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCCCCc
Q 016901          159 PALG-------NASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGFP  221 (380)
Q Consensus       159 ~a~~-------~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~~~~  221 (380)
                      ++++       .+|+||||||.......      +....+++|+.|+.++++++    ++.+.++||++||......   
T Consensus        62 ~~~~~~~~~~g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~---  138 (270)
T PRK06179         62 AAVDEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLP---  138 (270)
T ss_pred             HHHHHHHHhCCCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCC---
Confidence            8774       47999999996533221      22344789999988888774    5677889999999755321   


Q ss_pred             hhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeecc-----------CCcccCCCC
Q 016901          222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQ-----------EDTLFGGQV  283 (380)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~-----------~~~~~~~~i  283 (380)
                         ......|+.+|...+.+++       +.|+++++|+||++.++..............           .........
T Consensus       139 ---~~~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (270)
T PRK06179        139 ---APYMALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVAKAVKKAD  215 (270)
T ss_pred             ---CCCccHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHHhccccCC
Confidence               1223469999999987754       3699999999999988743211100000000           001122357


Q ss_pred             CHHHHHHHHHHHHhCCC
Q 016901          284 SNLQVAELLACMAKNRS  300 (380)
Q Consensus       284 ~~~DvA~~i~~~l~~~~  300 (380)
                      +++|+|+.++.++..+.
T Consensus       216 ~~~~va~~~~~~~~~~~  232 (270)
T PRK06179        216 APEVVADTVVKAALGPW  232 (270)
T ss_pred             CHHHHHHHHHHHHcCCC
Confidence            89999999999998755

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.87  E-value=1.2e-20  Score=176.25  Aligned_cols=197  Identities=16%  Similarity=0.143  Sum_probs=141.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ++++|+||||+|+||+++++.|+++|++|++++|++++...+..                   .+++++.+|++|.++++
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~-------------------~~~~~~~~Dl~d~~~~~   63 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA-------------------EGLEAFQLDYAEPESIA   63 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-------------------CCceEEEccCCCHHHHH
Confidence            45789999999999999999999999999999999877665432                   45788999999998877


Q ss_pred             HHhc--------CCCEEEEccccCccccC------CCCCcchhhHHH----HHHHHHHHHHcCCCEEEEEccCCCCCCCC
Q 016901          159 PALG--------NASVVICCIGASEKEVF------DITGPYRIDFQA----TKNLVDAATIAKVNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       159 ~a~~--------~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g----~~~ll~a~~~~~v~r~V~~SS~~~~~~~~  220 (380)
                      ++++        .+|+||||||.......      +....+++|+.|    ++++++.+++.+.++||++||......  
T Consensus        64 ~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~--  141 (277)
T PRK05993         64 ALVAQVLELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVP--  141 (277)
T ss_pred             HHHHHHHHHcCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCC--
Confidence            6653        58999999986533221      123347899998    566777777788889999999755321  


Q ss_pred             chhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccccc-c--ccee----------------ecc
Q 016901          221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE-T--HNIT----------------LSQ  274 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~-~--~~~~----------------~~~  274 (380)
                          ......|+.+|++.|.+++       ..|+++++|+||.+.++...... .  ....                +..
T Consensus       142 ----~~~~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (277)
T PRK05993        142 ----MKYRGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRFRANALAAFKRWIDIENSVHRAAYQQQMARLEG  217 (277)
T ss_pred             ----CCccchHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCchhhHHHHHHhhhhccccchhHHHHHHHHHHHHh
Confidence                1234579999999998764       47999999999999876321100 0  0000                000


Q ss_pred             CCcccCCCCCHHHHHHHHHHHHhCCC
Q 016901          275 EDTLFGGQVSNLQVAELLACMAKNRS  300 (380)
Q Consensus       275 ~~~~~~~~i~~~DvA~~i~~~l~~~~  300 (380)
                      ........++++++|+.++.++.++.
T Consensus       218 ~~~~~~~~~~~~~va~~i~~a~~~~~  243 (277)
T PRK05993        218 GGSKSRFKLGPEAVYAVLLHALTAPR  243 (277)
T ss_pred             hhhccccCCCHHHHHHHHHHHHcCCC
Confidence            00000113789999999999998765

>PRK06194 hypothetical protein; Provisional

Probab=99.87  E-value=8.5e-21  Score=178.04  Aligned_cols=205  Identities=13%  Similarity=0.066  Sum_probs=142.1

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .+.++++|||||+||||++++++|+++|++|++++|+.+...+....+...             ..++.++.+|++|.++
T Consensus         3 ~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~d~~~   69 (287)
T PRK06194          3 DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQ-------------GAEVLGVRTDVSDAAQ   69 (287)
T ss_pred             CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc-------------CCeEEEEECCCCCHHH
Confidence            345689999999999999999999999999999999877666555443321             1468889999999988


Q ss_pred             HHHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHH----HHHcCC------CEEEEEccC
Q 016901          157 IEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDA----ATIAKV------NHFIMVSSL  213 (380)
Q Consensus       157 ~~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a----~~~~~v------~r~V~~SS~  213 (380)
                      ++++++       ++|+||||||......      .++...+++|+.|+.+++++    +.+.+.      +++|++||.
T Consensus        70 ~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~  149 (287)
T PRK06194         70 VEALADAALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASM  149 (287)
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCCh
Confidence            888774       5899999999754321      12233478999999987777    444443      589999997


Q ss_pred             CCCCCCCchhhhchhhHHHHHHHHHHHHHHH---------CCCCEEEEecCcccCCCcccccccceeeccCCc-------
Q 016901          214 GTNKFGFPAAILNLFWGVLLWKRKAEEALIA---------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDT-------  277 (380)
Q Consensus       214 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~---------~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~-------  277 (380)
                      +.....      .....|+.+|.+.+.+++.         .+++++.+.||.+..+...........+.....       
T Consensus       150 ~~~~~~------~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~  223 (287)
T PRK06194        150 AGLLAP------PAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQSERNRPADLANTAPPTRSQLI  223 (287)
T ss_pred             hhccCC------CCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccccccCchhcccCccccchhhH
Confidence            664321      2234699999999987652         358888999999866532111000111100000       


Q ss_pred             --------ccCCCCCHHHHHHHHHHHHhCCC
Q 016901          278 --------LFGGQVSNLQVAELLACMAKNRS  300 (380)
Q Consensus       278 --------~~~~~i~~~DvA~~i~~~l~~~~  300 (380)
                              ...+.++++|+|+.++.++....
T Consensus       224 ~~~~~~~~~~~~~~s~~dva~~i~~~~~~~~  254 (287)
T PRK06194        224 AQAMSQKAVGSGKVTAEEVAQLVFDAIRAGR  254 (287)
T ss_pred             HHHHHHhhhhccCCCHHHHHHHHHHHHHcCC
Confidence                    01124789999999998886443

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.87  E-value=7.3e-21  Score=176.38  Aligned_cols=218  Identities=17%  Similarity=0.154  Sum_probs=154.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      ++++++|||||+|+||.++++.|+++|++|++++|+.++.+++.+.++..+             .++.++.+|++|.+++
T Consensus         8 ~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~-------------~~~~~~~~D~~~~~~~   74 (263)
T PRK07814          8 LDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAG-------------RRAHVVAADLAHPEAT   74 (263)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------------CcEEEEEccCCCHHHH
Confidence            367899999999999999999999999999999999877766655443211             5688999999999888


Q ss_pred             HHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHHH-----cCCCEEEEEccCCCCCCC
Q 016901          158 EPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATI-----AKVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~~-----~~v~r~V~~SS~~~~~~~  219 (380)
                      .++++       ++|+||||||......      .++...+++|+.++.++++++..     .+.++||++||.......
T Consensus        75 ~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~  154 (263)
T PRK07814         75 AGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAG  154 (263)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCC
Confidence            76653       6899999998542211      12344578999999999999863     456789999997553221


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHHH------CCCCEEEEecCcccCCCccccc-cccee-eccCCcccCCCCCHHHHHHH
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKE-THNIT-LSQEDTLFGGQVSNLQVAEL  291 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~------~g~~~~ivRpg~v~gp~~~~~~-~~~~~-~~~~~~~~~~~i~~~DvA~~  291 (380)
                            .....|+.+|.+++.+++.      .+++++.|+||.+.++...... ..... .............++|+|++
T Consensus       155 ------~~~~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~  228 (263)
T PRK07814        155 ------RGFAAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEVVAANDELRAPMEKATPLRRLGDPEDIAAA  228 (263)
T ss_pred             ------CCCchhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence                  2345699999999988763      4689999999999766321100 00000 00011112234689999999


Q ss_pred             HHHHHhCC-CCccCcEEEEecCCC
Q 016901          292 LACMAKNR-SLSYCKVVEVIAETT  314 (380)
Q Consensus       292 i~~~l~~~-~~~~~~~~ni~~~~~  314 (380)
                      ++.++.+. ....++.+.+.++..
T Consensus       229 ~~~l~~~~~~~~~g~~~~~~~~~~  252 (263)
T PRK07814        229 AVYLASPAGSYLTGKTLEVDGGLT  252 (263)
T ss_pred             HHHHcCccccCcCCCEEEECCCcc
Confidence            99998763 234577777766543

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.87  E-value=1.4e-20  Score=173.89  Aligned_cols=216  Identities=15%  Similarity=0.143  Sum_probs=150.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC-chhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS-VQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .++|++|||||+|+||+++++.|+++|++|+++.|. .+....+.+.+...             ..++.++.+|++|.++
T Consensus         7 ~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~Dl~d~~~   73 (258)
T PRK09134          7 AAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRAL-------------GRRAVALQADLADEAE   73 (258)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-------------CCeEEEEEcCCCCHHH
Confidence            467899999999999999999999999999887764 44444444433221             1568899999999988


Q ss_pred             HHHHh-------cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHHHc----CCCEEEEEccCCCCCCC
Q 016901          157 IEPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIA----KVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       157 ~~~a~-------~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~~~----~v~r~V~~SS~~~~~~~  219 (380)
                      +.+++       +++|+||||||......      .++...+++|+.++.++++++...    +.+++|+++|...... 
T Consensus        74 ~~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~-  152 (258)
T PRK09134         74 VRALVARASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNL-  152 (258)
T ss_pred             HHHHHHHHHHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCC-
Confidence            87776       35899999998643211      123345789999999999887642    3458888887543221 


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHHH------CCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHH
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA  293 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~------~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~  293 (380)
                           ......|+.+|.++|.+.+.      .++++++++||++.........  .+.........+...+++|+|++++
T Consensus       153 -----~p~~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~d~a~~~~  225 (258)
T PRK09134        153 -----NPDFLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQSPE--DFARQHAATPLGRGSTPEEIAAAVR  225 (258)
T ss_pred             -----CCCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCcccChH--HHHHHHhcCCCCCCcCHHHHHHHHH
Confidence                 11234699999999877653      3489999999998764321000  0000011112234588999999999


Q ss_pred             HHHhCCCCccCcEEEEecCCCC
Q 016901          294 CMAKNRSLSYCKVVEVIAETTA  315 (380)
Q Consensus       294 ~~l~~~~~~~~~~~ni~~~~~~  315 (380)
                      .+++.+. ..++.|++.++...
T Consensus       226 ~~~~~~~-~~g~~~~i~gg~~~  246 (258)
T PRK09134        226 YLLDAPS-VTGQMIAVDGGQHL  246 (258)
T ss_pred             HHhcCCC-cCCCEEEECCCeec
Confidence            9998765 56788888887644

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.87  E-value=1.5e-20  Score=171.89  Aligned_cols=197  Identities=17%  Similarity=0.147  Sum_probs=144.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ++++++||||+|+||++++++|+++|++|++++|++++...+.+.++..+             .++.++.+|++|.+++.
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~D~~~~~~~~   71 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTG-------------VKAAAYSIDLSNPEAIA   71 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCC-------------CcEEEEEccCCCHHHHH
Confidence            56799999999999999999999999999999999877666655443211             46889999999998877


Q ss_pred             HHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCCCCc
Q 016901          159 PALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGFP  221 (380)
Q Consensus       159 ~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~~~~  221 (380)
                      ++++       ++|+||||||......      .++...+++|+.++.++++++    .+.+.+++|++||.......  
T Consensus        72 ~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~--  149 (241)
T PRK07454         72 PGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAF--  149 (241)
T ss_pred             HHHHHHHHHcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCC--
Confidence            7653       5899999998653221      123334778999888877665    44556799999997653321  


Q ss_pred             hhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHH
Q 016901          222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLAC  294 (380)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~  294 (380)
                          .....|+.+|...+.+.+       ..|+++++||||++.+|....   ....   ........++++|+|++++.
T Consensus       150 ----~~~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~---~~~~---~~~~~~~~~~~~~va~~~~~  219 (241)
T PRK07454        150 ----PQWGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDT---ETVQ---ADFDRSAMLSPEQVAQTILH  219 (241)
T ss_pred             ----CCccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCcccc---cccc---cccccccCCCHHHHHHHHHH
Confidence                223469999999987754       368999999999998774210   0000   00011246899999999999


Q ss_pred             HHhCCC
Q 016901          295 MAKNRS  300 (380)
Q Consensus       295 ~l~~~~  300 (380)
                      ++.++.
T Consensus       220 l~~~~~  225 (241)
T PRK07454        220 LAQLPP  225 (241)
T ss_pred             HHcCCc
Confidence            998875

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.87  E-value=5.3e-21  Score=174.97  Aligned_cols=212  Identities=16%  Similarity=0.098  Sum_probs=152.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++++++||||+|+||+++++.|+++|++|++++|+.++.+++.+.                  .+..++.+|++|.+++
T Consensus         7 ~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~------------------~~~~~~~~D~~~~~~v   68 (245)
T PRK07060          7 FSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGE------------------TGCEPLRLDVGDDAAI   68 (245)
T ss_pred             cCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH------------------hCCeEEEecCCCHHHH
Confidence            3568999999999999999999999999999999998766544321                  2366789999999888


Q ss_pred             HHHhc---CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHHHc----C-CCEEEEEccCCCCCCCCchh
Q 016901          158 EPALG---NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIA----K-VNHFIMVSSLGTNKFGFPAA  223 (380)
Q Consensus       158 ~~a~~---~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~~~----~-v~r~V~~SS~~~~~~~~~~~  223 (380)
                      .++++   ++|+||||||......      .++...+.+|+.++.++++++.+.    + .++||++||.+.....    
T Consensus        69 ~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----  144 (245)
T PRK07060         69 RAALAAAGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGL----  144 (245)
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCC----
Confidence            88774   5899999998643211      123334668999999999887542    2 3689999997653321    


Q ss_pred             hhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccc--ccccceeeccCCcccCCCCCHHHHHHHHHH
Q 016901          224 ILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAY--KETHNITLSQEDTLFGGQVSNLQVAELLAC  294 (380)
Q Consensus       224 ~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~--~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~  294 (380)
                        .....|+.+|.++|.+++       ..|++++.+|||+++++....  ...............+.+++++|+|++++.
T Consensus       145 --~~~~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~  222 (245)
T PRK07060        145 --PDHLAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAIPLGRFAEVDDVAAPILF  222 (245)
T ss_pred             --CCCcHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence              223469999999998765       258999999999999885321  110000000011123467999999999999


Q ss_pred             HHhCCC-CccCcEEEEecCC
Q 016901          295 MAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       295 ~l~~~~-~~~~~~~ni~~~~  313 (380)
                      ++..+. ...|+++++.++.
T Consensus       223 l~~~~~~~~~G~~~~~~~g~  242 (245)
T PRK07060        223 LLSDAASMVSGVSLPVDGGY  242 (245)
T ss_pred             HcCcccCCccCcEEeECCCc
Confidence            998654 2357888877653

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.87  E-value=1.6e-20  Score=173.42  Aligned_cols=218  Identities=12%  Similarity=0.092  Sum_probs=151.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      +++||||||+|+||++++++|+++|++|++++|+..+.....+.+....           ...++.++.+|++|.+++..
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~-----------~~~~~~~~~~D~~~~~~i~~   70 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEY-----------GEGMAYGFGADATSEQSVLA   70 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhc-----------CCceeEEEEccCCCHHHHHH
Confidence            5689999999999999999999999999999998876665554433210           01358899999999887776


Q ss_pred             Hh-------cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHH----HcC-CCEEEEEccCCCCCCCCc
Q 016901          160 AL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAK-VNHFIMVSSLGTNKFGFP  221 (380)
Q Consensus       160 a~-------~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~----~~~-v~r~V~~SS~~~~~~~~~  221 (380)
                      ++       +.+|+||||||......      .++...+++|+.++.++++++.    +.+ ..++|++||..... +. 
T Consensus        71 ~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~-~~-  148 (259)
T PRK12384         71 LSRGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKV-GS-  148 (259)
T ss_pred             HHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCccccc-CC-
Confidence            65       46899999998643221      1223446889999887777664    345 35899999965322 11 


Q ss_pred             hhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccc--cc----cc------eeeccCCcccCCC
Q 016901          222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK--ET----HN------ITLSQEDTLFGGQ  282 (380)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~--~~----~~------~~~~~~~~~~~~~  282 (380)
                          .....|+.+|++.+.+++       ..|+++++||||.++++.....  ..    ..      ..........+.+
T Consensus       149 ----~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (259)
T PRK12384        149 ----KHNSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRG  224 (259)
T ss_pred             ----CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCC
Confidence                123469999999876654       3789999999999876532110  00    00      0000112223467


Q ss_pred             CCHHHHHHHHHHHHhCCC-CccCcEEEEecCCC
Q 016901          283 VSNLQVAELLACMAKNRS-LSYCKVVEVIAETT  314 (380)
Q Consensus       283 i~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~~  314 (380)
                      ++++|++++++.++.+.. ...|++|++.+++.
T Consensus       225 ~~~~dv~~~~~~l~~~~~~~~~G~~~~v~~g~~  257 (259)
T PRK12384        225 CDYQDVLNMLLFYASPKASYCTGQSINVTGGQV  257 (259)
T ss_pred             CCHHHHHHHHHHHcCcccccccCceEEEcCCEE
Confidence            899999999999987543 24688999998763

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.87  E-value=1.3e-20  Score=174.64  Aligned_cols=215  Identities=15%  Similarity=0.141  Sum_probs=151.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .+++++++||||+|+||++++++|+++|++|++++|+.++.+++.+.+                ..++.++++|++|.++
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----------------~~~~~~~~~Dl~~~~~   66 (261)
T PRK08265          3 GLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL----------------GERARFIATDITDDAA   66 (261)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----------------CCeeEEEEecCCCHHH
Confidence            456789999999999999999999999999999999987665554322                1468899999999988


Q ss_pred             HHHHh-------cCCCEEEEccccCccc-----cCCCCCcchhhHHHHHHHHHHHHH---cCCCEEEEEccCCCCCCCCc
Q 016901          157 IEPAL-------GNASVVICCIGASEKE-----VFDITGPYRIDFQATKNLVDAATI---AKVNHFIMVSSLGTNKFGFP  221 (380)
Q Consensus       157 ~~~a~-------~~~d~Vi~~Ag~~~~~-----~~~~~~~~~~nv~g~~~ll~a~~~---~~v~r~V~~SS~~~~~~~~~  221 (380)
                      +.+++       +.+|+||||||.....     ..++...+++|+.++.++++++..   .+-++||++||.......  
T Consensus        67 ~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~--  144 (261)
T PRK08265         67 IERAVATVVARFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQ--  144 (261)
T ss_pred             HHHHHHHHHHHhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCC--
Confidence            87766       3689999999864221     112334478899999888887653   334689999997553211  


Q ss_pred             hhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCccc-ccccc-e--eeccCCcccCCCCCHHHHHH
Q 016901          222 AAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAY-KETHN-I--TLSQEDTLFGGQVSNLQVAE  290 (380)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~-~~~~~-~--~~~~~~~~~~~~i~~~DvA~  290 (380)
                          .....|+.+|...+.+.+.       .|+++++|+||++.++.... ..... .  .........+....++|+|+
T Consensus       145 ----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~  220 (261)
T PRK08265        145 ----TGRWLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAPFHLLGRVGDPEEVAQ  220 (261)
T ss_pred             ----CCCchhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhhcccCCCCCccCHHHHHH
Confidence                1234699999999877652       68999999999998763211 00000 0  00011112334578999999


Q ss_pred             HHHHHHhCCC-CccCcEEEEecCC
Q 016901          291 LLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       291 ~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      ++..++.... ...+..+.+.++.
T Consensus       221 ~~~~l~s~~~~~~tG~~i~vdgg~  244 (261)
T PRK08265        221 VVAFLCSDAASFVTGADYAVDGGY  244 (261)
T ss_pred             HHHHHcCccccCccCcEEEECCCe
Confidence            9999997643 3467777776663

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.87  E-value=4.3e-21  Score=171.66  Aligned_cols=222  Identities=15%  Similarity=0.139  Sum_probs=145.7

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHHhc
Q 016901           83 AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALG  162 (380)
Q Consensus        83 vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a~~  162 (380)
                      |+|||||||||++|+.+|.+.||+|++++|++.+......                   ..+.       ..+.+.+...
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~-------------------~~v~-------~~~~~~~~~~   54 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLH-------------------PNVT-------LWEGLADALT   54 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcC-------------------cccc-------ccchhhhccc
Confidence            6899999999999999999999999999999987654221                   1222       1233444444


Q ss_pred             -CCCEEEEccccCcccc-CCC---CCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCCchh----hhch-hhHH-
Q 016901          163 -NASVVICCIGASEKEV-FDI---TGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAA----ILNL-FWGV-  231 (380)
Q Consensus       163 -~~d~Vi~~Ag~~~~~~-~~~---~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~~~----~~~~-~~~Y-  231 (380)
                       ++|+|||+||..-... ++.   +...+.-+..|+.|.++..+...+.=+++|.+++..|+....    ..++ -..+ 
T Consensus        55 ~~~DavINLAG~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fl  134 (297)
T COG1090          55 LGIDAVINLAGEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFL  134 (297)
T ss_pred             CCCCEEEECCCCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCCChH
Confidence             7999999999653322 221   222456788899999998855433334444443333433221    0011 1111 


Q ss_pred             HHHHHHHHHHHH---HCCCCEEEEecCcccCCCccccccc--ceeec-----cCCcccCCCCCHHHHHHHHHHHHhCCCC
Q 016901          232 LLWKRKAEEALI---ASGLPYTIVRPGGMERPTDAYKETH--NITLS-----QEDTLFGGQVSNLQVAELLACMAKNRSL  301 (380)
Q Consensus       232 ~~sK~~~E~~l~---~~g~~~~ivRpg~v~gp~~~~~~~~--~~~~~-----~~~~~~~~~i~~~DvA~~i~~~l~~~~~  301 (380)
                      ...-..-|+...   +.|.+++++|.|.|.++.+-.....  .+.+.     ..+..+-.|||++|++++|..++++...
T Consensus       135 a~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~SWIhieD~v~~I~fll~~~~l  214 (297)
T COG1090         135 AQLCQDWEEEALQAQQLGTRVVLLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWFSWIHIEDLVNAILFLLENEQL  214 (297)
T ss_pred             HHHHHHHHHHHhhhhhcCceEEEEEEEEEecCCCcchhhhcchhhhccCCccCCCCceeeeeeHHHHHHHHHHHHhCcCC
Confidence            112222333332   3699999999999999754221111  11111     1223344699999999999999999876


Q ss_pred             ccCcEEEEecCCCCCcchHHHHHHhcCCCCC
Q 016901          302 SYCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (380)
Q Consensus       302 ~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~~  332 (380)
                        .+.||+.+|.+.+..++.+.+.++.++..
T Consensus       215 --sGp~N~taP~PV~~~~F~~al~r~l~RP~  243 (297)
T COG1090         215 --SGPFNLTAPNPVRNKEFAHALGRALHRPA  243 (297)
T ss_pred             --CCcccccCCCcCcHHHHHHHHHHHhCCCc
Confidence              78999999999999999999999988543

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.87  E-value=1.4e-20  Score=173.36  Aligned_cols=217  Identities=11%  Similarity=0.067  Sum_probs=154.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +.++++|||||+|+||++++++|+++|++|++++|+.++..+..+.++..+             .++.++.+|++|.+++
T Consensus         7 l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~-------------~~~~~~~~Dl~~~~~~   73 (254)
T PRK08085          7 LAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEG-------------IKAHAAPFNVTHKQEV   73 (254)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcC-------------CeEEEEecCCCCHHHH
Confidence            467899999999999999999999999999999999877766655444321             4677889999999888


Q ss_pred             HHHh-------cCCCEEEEccccCccc------cCCCCCcchhhHHHHHHHHHHHHH----cCCCEEEEEccCCCCCCCC
Q 016901          158 EPAL-------GNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       158 ~~a~-------~~~d~Vi~~Ag~~~~~------~~~~~~~~~~nv~g~~~ll~a~~~----~~v~r~V~~SS~~~~~~~~  220 (380)
                      .+++       +.+|+||||||.....      ..++...+++|+.++.++++++..    .+.++||++||....... 
T Consensus        74 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-  152 (254)
T PRK08085         74 EAAIEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGR-  152 (254)
T ss_pred             HHHHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCC-
Confidence            7766       3589999999864321      123344588999998888877653    456799999997543211 


Q ss_pred             chhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcccccc-cce-eeccCCcccCCCCCHHHHHHH
Q 016901          221 PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-HNI-TLSQEDTLFGGQVSNLQVAEL  291 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~~-~~~-~~~~~~~~~~~~i~~~DvA~~  291 (380)
                           .....|+.+|.+.+.+++.       .|+++++|+||++.++....... ... .........+.+..++|+|++
T Consensus       153 -----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~  227 (254)
T PRK08085        153 -----DTITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQELIGA  227 (254)
T ss_pred             -----CCCcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence                 2335799999999987762       68999999999998874321100 000 000111123456789999999


Q ss_pred             HHHHHhCC-CCccCcEEEEecCC
Q 016901          292 LACMAKNR-SLSYCKVVEVIAET  313 (380)
Q Consensus       292 i~~~l~~~-~~~~~~~~ni~~~~  313 (380)
                      +..++... ....|.++.+-++.
T Consensus       228 ~~~l~~~~~~~i~G~~i~~dgg~  250 (254)
T PRK08085        228 AVFLSSKASDFVNGHLLFVDGGM  250 (254)
T ss_pred             HHHHhCccccCCcCCEEEECCCe
Confidence            99998753 33457777666553

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.86  E-value=1e-20  Score=174.74  Aligned_cols=191  Identities=14%  Similarity=0.112  Sum_probs=141.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      +++|+||||+|+||.+++++|+++|++|++++|+.++..+..+.+..              ..++.++.+|++|.+++.+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~--------------~~~~~~~~~Dl~~~~~i~~   67 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPK--------------AARVSVYAADVRDADALAA   67 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccc--------------CCeeEEEEcCCCCHHHHHH
Confidence            46899999999999999999999999999999998766554432211              0268899999999988877


Q ss_pred             Hhc-------CCCEEEEccccCcccc-------CCCCCcchhhHHHHHHHHH----HHHHcCCCEEEEEccCCCCCCCCc
Q 016901          160 ALG-------NASVVICCIGASEKEV-------FDITGPYRIDFQATKNLVD----AATIAKVNHFIMVSSLGTNKFGFP  221 (380)
Q Consensus       160 a~~-------~~d~Vi~~Ag~~~~~~-------~~~~~~~~~nv~g~~~ll~----a~~~~~v~r~V~~SS~~~~~~~~~  221 (380)
                      +++       .+|+||||||......       .++...+++|+.|+.++++    ++++.+.++||++||.......  
T Consensus        68 ~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~--  145 (257)
T PRK07024         68 AAADFIAAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGL--  145 (257)
T ss_pred             HHHHHHHhCCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCC--
Confidence            663       4899999998643211       1233447899999988776    5556667899999997553211  


Q ss_pred             hhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHH
Q 016901          222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLAC  294 (380)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~  294 (380)
                          .....|+.+|.+.+.+++       .+|+++++|+||.+.++.....     ..  .   ....++++|+|+.++.
T Consensus       146 ----~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~-----~~--~---~~~~~~~~~~a~~~~~  211 (257)
T PRK07024        146 ----PGAGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAHN-----PY--P---MPFLMDADRFAARAAR  211 (257)
T ss_pred             ----CCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhcC-----CC--C---CCCccCHHHHHHHHHH
Confidence                223469999999997764       3689999999999988742110     00  0   0124789999999999


Q ss_pred             HHhCCC
Q 016901          295 MAKNRS  300 (380)
Q Consensus       295 ~l~~~~  300 (380)
                      ++.+..
T Consensus       212 ~l~~~~  217 (257)
T PRK07024        212 AIARGR  217 (257)
T ss_pred             HHhCCC
Confidence            998654

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.86  E-value=5.1e-20  Score=171.60  Aligned_cols=191  Identities=16%  Similarity=0.062  Sum_probs=140.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++++++||||+|+||++++++|+++|++|++++|++++.....+.+                 .++.++.+|++|++++
T Consensus         3 ~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~-----------------~~~~~~~~D~~~~~~~   65 (273)
T PRK07825          3 LRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAEL-----------------GLVVGGPLDVTDPASF   65 (273)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----------------ccceEEEccCCCHHHH
Confidence            35689999999999999999999999999999999987766544321                 2478899999999887


Q ss_pred             HHHh-------cCCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCCCC
Q 016901          158 EPAL-------GNASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       158 ~~a~-------~~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~~~  220 (380)
                      .+++       +++|++|||||.......      +....+++|+.|+.++++++    .+.+.++||++||.+..... 
T Consensus        66 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-  144 (273)
T PRK07825         66 AAFLDAVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPV-  144 (273)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCC-
Confidence            6655       468999999996532211      12334788999888776655    45677899999998653321 


Q ss_pred             chhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHH
Q 016901          221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA  293 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~  293 (380)
                           .....|+.+|.+.+.+.+       ..|+++++|+||++.++.....       .  .......++++|+|+.++
T Consensus       145 -----~~~~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~-------~--~~~~~~~~~~~~va~~~~  210 (273)
T PRK07825        145 -----PGMATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGT-------G--GAKGFKNVEPEDVAAAIV  210 (273)
T ss_pred             -----CCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhccc-------c--cccCCCCCCHHHHHHHHH
Confidence                 234569999988775543       4799999999999976531100       0  011124689999999999


Q ss_pred             HHHhCCC
Q 016901          294 CMAKNRS  300 (380)
Q Consensus       294 ~~l~~~~  300 (380)
                      .++.++.
T Consensus       211 ~~l~~~~  217 (273)
T PRK07825        211 GTVAKPR  217 (273)
T ss_pred             HHHhCCC
Confidence            9998865

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.86  E-value=4.1e-20  Score=177.31  Aligned_cols=202  Identities=15%  Similarity=0.111  Sum_probs=145.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ++.+++|+||||+|+||+++++.|+++|++|++++|+.++.+++.+.++..+             .++.++.+|++|.++
T Consensus         5 ~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g-------------~~~~~v~~Dv~d~~~   71 (334)
T PRK07109          5 PIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAG-------------GEALAVVADVADAEA   71 (334)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcC-------------CcEEEEEecCCCHHH
Confidence            3467899999999999999999999999999999999888777666554322             568899999999988


Q ss_pred             HHHHh-------cCCCEEEEccccCccccC------CCCCcchhhHHHHHHH----HHHHHHcCCCEEEEEccCCCCCCC
Q 016901          157 IEPAL-------GNASVVICCIGASEKEVF------DITGPYRIDFQATKNL----VDAATIAKVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       157 ~~~a~-------~~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~l----l~a~~~~~v~r~V~~SS~~~~~~~  219 (380)
                      +++++       +.+|++|||||.......      ++...+++|+.|+.++    ++.+++.+.++||++||.......
T Consensus        72 v~~~~~~~~~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~  151 (334)
T PRK07109         72 VQAAADRAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSI  151 (334)
T ss_pred             HHHHHHHHHHHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCC
Confidence            88765       469999999996432211      2233477887776654    455556666799999998764321


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHHH---------CCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHH
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALIA---------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAE  290 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~---------~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~  290 (380)
                            .....|+.+|.+.+.+.+.         .++++++|+||.+.+|.......   ............++++|+|+
T Consensus       152 ------~~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~~---~~~~~~~~~~~~~~pe~vA~  222 (334)
T PRK07109        152 ------PLQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWARS---RLPVEPQPVPPIYQPEVVAD  222 (334)
T ss_pred             ------CcchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhhh---hccccccCCCCCCCHHHHHH
Confidence                  2335799999998766531         46999999999998874221110   11111111234579999999


Q ss_pred             HHHHHHhCCC
Q 016901          291 LLACMAKNRS  300 (380)
Q Consensus       291 ~i~~~l~~~~  300 (380)
                      +++.++.++.
T Consensus       223 ~i~~~~~~~~  232 (334)
T PRK07109        223 AILYAAEHPR  232 (334)
T ss_pred             HHHHHHhCCC
Confidence            9999998763

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.86  E-value=4.8e-20  Score=166.55  Aligned_cols=203  Identities=17%  Similarity=0.164  Sum_probs=143.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ++|+++||||+|+||+++++.|+++ ++|++++|+.++.+.+.+..                 .+++++.+|++|.+++.
T Consensus         2 ~~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~-----------------~~~~~~~~D~~~~~~~~   63 (227)
T PRK08219          2 ERPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL-----------------PGATPFPVDLTDPEAIA   63 (227)
T ss_pred             CCCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh-----------------ccceEEecCCCCHHHHH
Confidence            3578999999999999999999999 99999999987655443211                 35889999999999999


Q ss_pred             HHhc---CCCEEEEccccCccccC------CCCCcchhhHHHHH----HHHHHHHHcCCCEEEEEccCCCCCCCCchhhh
Q 016901          159 PALG---NASVVICCIGASEKEVF------DITGPYRIDFQATK----NLVDAATIAKVNHFIMVSSLGTNKFGFPAAIL  225 (380)
Q Consensus       159 ~a~~---~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~----~ll~a~~~~~v~r~V~~SS~~~~~~~~~~~~~  225 (380)
                      +++.   ++|+|||++|.......      ++...+++|+.+..    ++++++++. .+++|++||.......      
T Consensus        64 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~~~------  136 (227)
T PRK08219         64 AAVEQLGRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA-HGHVVFINSGAGLRAN------  136 (227)
T ss_pred             HHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCeEEEEcchHhcCcC------
Confidence            8886   59999999986532211      12223677888844    444545544 4689999997653321      


Q ss_pred             chhhHHHHHHHHHHHHHHH-----CC-CCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHHHHhCC
Q 016901          226 NLFWGVLLWKRKAEEALIA-----SG-LPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNR  299 (380)
Q Consensus       226 ~~~~~Y~~sK~~~E~~l~~-----~g-~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~  299 (380)
                      .....|+.+|...+.+++.     .+ ++++.++||.+.++........    .......+.+++++|+|++++.+++++
T Consensus       137 ~~~~~y~~~K~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~----~~~~~~~~~~~~~~dva~~~~~~l~~~  212 (227)
T PRK08219        137 PGWGSYAASKFALRALADALREEEPGNVRVTSVHPGRTDTDMQRGLVAQ----EGGEYDPERYLRPETVAKAVRFAVDAP  212 (227)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHhcCCceEEEEecCCccchHhhhhhhh----hccccCCCCCCCHHHHHHHHHHHHcCC
Confidence            2234699999998877652     34 9999999999876632110000    001111235799999999999999876


Q ss_pred             CCccCcEEEEecC
Q 016901          300 SLSYCKVVEVIAE  312 (380)
Q Consensus       300 ~~~~~~~~ni~~~  312 (380)
                      .  .+.++|+.-.
T Consensus       213 ~--~~~~~~~~~~  223 (227)
T PRK08219        213 P--DAHITEVVVR  223 (227)
T ss_pred             C--CCccceEEEe
Confidence            5  3677777644

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.86  E-value=4.4e-20  Score=169.94  Aligned_cols=216  Identities=16%  Similarity=0.150  Sum_probs=148.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEe-CCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGV-RSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~-R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      ++|+++||||+|+||++++++|++.|++|++.. |+.++.++....+...+             .++..+.+|++|.+++
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~D~~~~~~~   69 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNG-------------GSAFSIGANLESLHGV   69 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcC-------------CceEEEecccCCHHHH
Confidence            568999999999999999999999999998875 55555555444333211             4577889999997666


Q ss_pred             HHHh-----------c--CCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHHHHc--CCCEEEEEccCCCC
Q 016901          158 EPAL-----------G--NASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTN  216 (380)
Q Consensus       158 ~~a~-----------~--~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~~~~--~v~r~V~~SS~~~~  216 (380)
                      ..++           +  ++|+||||||.......      ++...+++|+.++..+++++...  ..++||++||....
T Consensus        70 ~~~~~~~~~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~  149 (252)
T PRK12747         70 EALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATR  149 (252)
T ss_pred             HHHHHHHHHHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccc
Confidence            5433           1  68999999996432211      12344779999999999877543  23589999998663


Q ss_pred             CCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccce--eeccCCcccCCCCCHHH
Q 016901          217 KFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNI--TLSQEDTLFGGQVSNLQ  287 (380)
Q Consensus       217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~--~~~~~~~~~~~~i~~~D  287 (380)
                      ...      .....|+.+|++++.+++       ..|+++++|.||++.++..........  .........+.+.+++|
T Consensus       150 ~~~------~~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  223 (252)
T PRK12747        150 ISL------PDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGEVED  223 (252)
T ss_pred             cCC------CCchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccCHHHHHHHHhcCcccCCCCHHH
Confidence            321      223579999999997765       368999999999998874211000000  00011111245689999


Q ss_pred             HHHHHHHHHhCC-CCccCcEEEEecCC
Q 016901          288 VAELLACMAKNR-SLSYCKVVEVIAET  313 (380)
Q Consensus       288 vA~~i~~~l~~~-~~~~~~~~ni~~~~  313 (380)
                      +|+++..++... ....|..+.+.++.
T Consensus       224 va~~~~~l~s~~~~~~~G~~i~vdgg~  250 (252)
T PRK12747        224 IADTAAFLASPDSRWVTGQLIDVSGGS  250 (252)
T ss_pred             HHHHHHHHcCccccCcCCcEEEecCCc
Confidence            999999988753 23457777776653

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.86  E-value=1.5e-20  Score=171.95  Aligned_cols=215  Identities=17%  Similarity=0.144  Sum_probs=149.1

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .+++++++||||+|+||++++++|+++|+.|++..|+.++.+.+...+                ..++.++.+|++|.++
T Consensus         3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~----------------~~~~~~~~~D~~~~~~   66 (245)
T PRK12936          3 DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL----------------GERVKIFPANLSDRDE   66 (245)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh----------------CCceEEEEccCCCHHH
Confidence            346789999999999999999999999999999888877665543321                1468889999999988


Q ss_pred             HHHHh-------cCCCEEEEccccCccc------cCCCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCCC
Q 016901          157 IEPAL-------GNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       157 ~~~a~-------~~~d~Vi~~Ag~~~~~------~~~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~~  219 (380)
                      +.+++       .++|+||||||.....      ..++...+++|+.++.++++++.    +.+.++||++||..... +
T Consensus        67 ~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-~  145 (245)
T PRK12936         67 VKALGQKAEADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVT-G  145 (245)
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCc-C
Confidence            87764       4689999999864321      11234447889999888887764    34567999999965432 1


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHH
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELL  292 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i  292 (380)
                      .+     ....|+.+|.+.+.+++       ..|+++++++||++.++.....................+.+++|+++++
T Consensus       146 ~~-----~~~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~  220 (245)
T PRK12936        146 NP-----GQANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLNDKQKEAIMGAIPMKRMGTGAEVASAV  220 (245)
T ss_pred             CC-----CCcchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcccChHHHHHHhcCCCCCCCcCHHHHHHHH
Confidence            11     22359999987776554       3689999999999876532110000000000111223457899999999


Q ss_pred             HHHHhCCC-CccCcEEEEecCC
Q 016901          293 ACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       293 ~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      ..++.... ...|+++++.++.
T Consensus       221 ~~l~~~~~~~~~G~~~~~~~g~  242 (245)
T PRK12936        221 AYLASSEAAYVTGQTIHVNGGM  242 (245)
T ss_pred             HHHcCccccCcCCCEEEECCCc
Confidence            98886543 2358889888774

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.86  E-value=1.4e-20  Score=172.85  Aligned_cols=198  Identities=17%  Similarity=0.103  Sum_probs=139.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      |+|+||||+|+||.++++.|+++|++|++++|++++...+...+.                .++.++.+|++|.+++.++
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------------~~~~~~~~Dl~~~~~i~~~   64 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG----------------DNLYIAQLDVRNRAAIEEM   64 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc----------------cceEEEEecCCCHHHHHHH
Confidence            579999999999999999999999999999999877655443211                4688999999999888776


Q ss_pred             h-------cCCCEEEEccccCcc-------ccCCCCCcchhhHHHHHHHHHH----HHHcCCCEEEEEccCCCCCCCCch
Q 016901          161 L-------GNASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDA----ATIAKVNHFIMVSSLGTNKFGFPA  222 (380)
Q Consensus       161 ~-------~~~d~Vi~~Ag~~~~-------~~~~~~~~~~~nv~g~~~ll~a----~~~~~v~r~V~~SS~~~~~~~~~~  222 (380)
                      +       +++|.||||||....       +..++...+++|+.|+.+++++    +++.+.++||++||.+....    
T Consensus        65 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~----  140 (248)
T PRK10538         65 LASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWP----  140 (248)
T ss_pred             HHHHHHHcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCC----
Confidence            5       379999999985421       1112334478899996665554    45567789999999765321    


Q ss_pred             hhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcccc-cccceeeccCCcccCCCCCHHHHHHHHHH
Q 016901          223 AILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-ETHNITLSQEDTLFGGQVSNLQVAELLAC  294 (380)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~-~~~~~~~~~~~~~~~~~i~~~DvA~~i~~  294 (380)
                        ......|+.+|.+.+.+.+.       .|+++++|+||.+.|+..... ................++.++|+|++++.
T Consensus       141 --~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~  218 (248)
T PRK10538        141 --YAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWW  218 (248)
T ss_pred             --CCCCchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcHHHHHhhccccCCCCHHHHHHHHHH
Confidence              12334699999999877652       689999999999986532110 00000000000001246899999999999


Q ss_pred             HHhCCC
Q 016901          295 MAKNRS  300 (380)
Q Consensus       295 ~l~~~~  300 (380)
                      ++..+.
T Consensus       219 l~~~~~  224 (248)
T PRK10538        219 VATLPA  224 (248)
T ss_pred             HhcCCC
Confidence            997665

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.86  E-value=3.2e-20  Score=174.88  Aligned_cols=197  Identities=17%  Similarity=0.164  Sum_probs=145.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .+.+++|+||||+|+||+++++.|+++|++|++++|+.++.+++.+.+...+             .++.++.+|++|.++
T Consensus        37 ~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~-------------~~~~~~~~Dl~d~~~  103 (293)
T PRK05866         37 DLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAG-------------GDAMAVPCDLSDLDA  103 (293)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-------------CcEEEEEccCCCHHH
Confidence            3466899999999999999999999999999999999887776665544321             457889999999988


Q ss_pred             HHHHhc-------CCCEEEEccccCcccc--------CCCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCC
Q 016901          157 IEPALG-------NASVVICCIGASEKEV--------FDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNK  217 (380)
Q Consensus       157 ~~~a~~-------~~d~Vi~~Ag~~~~~~--------~~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~  217 (380)
                      +.++++       ++|+||||||......        .+....+++|+.|+.++++++    ++.+.+++|++||.+...
T Consensus       104 v~~~~~~~~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~  183 (293)
T PRK05866        104 VDALVADVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLS  183 (293)
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcC
Confidence            887765       7999999998653221        112234788999988877765    456678999999976532


Q ss_pred             CCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHH
Q 016901          218 FGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAE  290 (380)
Q Consensus       218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~  290 (380)
                      ...     .....|+.+|++.+.+++       ..|+++++|+||.+-++.....     .  ....  ...++++++|+
T Consensus       184 ~~~-----p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~-----~--~~~~--~~~~~pe~vA~  249 (293)
T PRK05866        184 EAS-----PLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPT-----K--AYDG--LPALTADEAAE  249 (293)
T ss_pred             CCC-----CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCcccccc-----c--cccC--CCCCCHHHHHH
Confidence            111     223569999999987765       2689999999999877632110     0  0001  12479999999


Q ss_pred             HHHHHHhCCC
Q 016901          291 LLACMAKNRS  300 (380)
Q Consensus       291 ~i~~~l~~~~  300 (380)
                      .++.++.+..
T Consensus       250 ~~~~~~~~~~  259 (293)
T PRK05866        250 WMVTAARTRP  259 (293)
T ss_pred             HHHHHHhcCC
Confidence            9999998754

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.86  E-value=4.4e-20  Score=170.96  Aligned_cols=202  Identities=17%  Similarity=0.165  Sum_probs=145.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      +++||||||+|+||+++++.|+++|++|++++|+..+.+.+.+.+...+             .++.++.+|++|.+++.+
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~-------------~~~~~~~~Dl~~~~~~~~   67 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHG-------------GEALVVPTDVSDAEACER   67 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------------CcEEEEEccCCCHHHHHH
Confidence            3579999999999999999999999999999999877666555443221             468889999999988887


Q ss_pred             Hhc-------CCCEEEEccccCccccCC-------CCCcchhhHHHHHHHHHHHHH---cCCCEEEEEccCCCCCCCCch
Q 016901          160 ALG-------NASVVICCIGASEKEVFD-------ITGPYRIDFQATKNLVDAATI---AKVNHFIMVSSLGTNKFGFPA  222 (380)
Q Consensus       160 a~~-------~~d~Vi~~Ag~~~~~~~~-------~~~~~~~nv~g~~~ll~a~~~---~~v~r~V~~SS~~~~~~~~~~  222 (380)
                      +++       ++|+||||||........       +...+++|+.++.++++.+..   .+.+++|++||.......   
T Consensus        68 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~---  144 (263)
T PRK06181         68 LIEAAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGV---  144 (263)
T ss_pred             HHHHHHHHcCCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCC---
Confidence            764       689999999865322111       223378999999999988753   234789999997653321   


Q ss_pred             hhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccc-cccceeeccCCcccCCCCCHHHHHHHHHH
Q 016901          223 AILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-ETHNITLSQEDTLFGGQVSNLQVAELLAC  294 (380)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~-~~~~~~~~~~~~~~~~~i~~~DvA~~i~~  294 (380)
                         .....|+.+|...+.+++       ..++++++++||++.++..... ................+++++|+|++++.
T Consensus       145 ---~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~  221 (263)
T PRK06181        145 ---PTRSGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRALDGDGKPLGKSPMQESKIMSAEECAEAILP  221 (263)
T ss_pred             ---CCccHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhhccccccccccccccccCCCCHHHHHHHHHH
Confidence               233569999999987764       2689999999999987632110 00001111111112257999999999999


Q ss_pred             HHhCCC
Q 016901          295 MAKNRS  300 (380)
Q Consensus       295 ~l~~~~  300 (380)
                      ++....
T Consensus       222 ~~~~~~  227 (263)
T PRK06181        222 AIARRK  227 (263)
T ss_pred             HhhCCC
Confidence            998643

>PRK07985 oxidoreductase; Provisional

Probab=99.86  E-value=2.1e-20  Score=176.31  Aligned_cols=217  Identities=16%  Similarity=0.129  Sum_probs=151.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCc--hhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV--QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~  155 (380)
                      +++++++||||+|+||+++++.|+++|++|++..|+.  +..+++.+.+...             ..++.++.+|++|.+
T Consensus        47 ~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~Dl~~~~  113 (294)
T PRK07985         47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEEC-------------GRKAVLLPGDLSDEK  113 (294)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHc-------------CCeEEEEEccCCCHH
Confidence            4668999999999999999999999999999887653  2334443333221             146788999999988


Q ss_pred             cHHHHh-------cCCCEEEEccccCcc-------ccCCCCCcchhhHHHHHHHHHHHHHc--CCCEEEEEccCCCCCCC
Q 016901          156 QIEPAL-------GNASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       156 ~~~~a~-------~~~d~Vi~~Ag~~~~-------~~~~~~~~~~~nv~g~~~ll~a~~~~--~v~r~V~~SS~~~~~~~  219 (380)
                      ++.+++       +++|++|||||....       ...++...+++|+.|+.++++++...  .-++||++||.......
T Consensus       114 ~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~  193 (294)
T PRK07985        114 FARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPS  193 (294)
T ss_pred             HHHHHHHHHHHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCC
Confidence            776655       468999999985321       11233455889999999999888642  12589999998664321


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccccc--ccceeeccCCcccCCCCCHHHHHH
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE--THNITLSQEDTLFGGQVSNLQVAE  290 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~--~~~~~~~~~~~~~~~~i~~~DvA~  290 (380)
                            .....|+.+|.+.+.+++       .+|+++++|+||++++|......  .............+.+..++|+|.
T Consensus       194 ------~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~pedva~  267 (294)
T PRK07985        194 ------PHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAP  267 (294)
T ss_pred             ------CCcchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCCHHHHHHHhccCCCCCCCCHHHHHH
Confidence                  223469999999987765       26999999999999988431100  000000011112234678999999


Q ss_pred             HHHHHHhCCC-CccCcEEEEecCC
Q 016901          291 LLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       291 ~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      ++..++.... ...+.++.+.++.
T Consensus       268 ~~~fL~s~~~~~itG~~i~vdgG~  291 (294)
T PRK07985        268 VYVYLASQESSYVTAEVHGVCGGE  291 (294)
T ss_pred             HHHhhhChhcCCccccEEeeCCCe
Confidence            9999997643 3467888777764

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.86  E-value=2.5e-20  Score=170.47  Aligned_cols=216  Identities=16%  Similarity=0.129  Sum_probs=152.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-eCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAG-VRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l-~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ++++++|||||+|+||.++++.|+++|++|+++ .|+.++...+.+.+...             ..++.++.+|++|+++
T Consensus         3 ~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~   69 (247)
T PRK05565          3 LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEE-------------GGDAIAVKADVSSEED   69 (247)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-------------CCeEEEEECCCCCHHH
Confidence            356799999999999999999999999999998 89877766555544321             1468899999999988


Q ss_pred             HHHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCCC
Q 016901          157 IEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       157 ~~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~~  219 (380)
                      +.+++.       ++|+|||++|......      ..++..+++|+.++.++++++.    +.+.++||++||.+.....
T Consensus        70 ~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~  149 (247)
T PRK05565         70 VENLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGA  149 (247)
T ss_pred             HHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCC
Confidence            877764       7999999998653211      1223447889999888877765    3456789999997553221


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccce-eeccCCcccCCCCCHHHHHHH
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNI-TLSQEDTLFGGQVSNLQVAEL  291 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~-~~~~~~~~~~~~i~~~DvA~~  291 (380)
                            .....|+.+|.+.+.+++       ..|+++++++||++.++.......... .... .........++|+++.
T Consensus       150 ------~~~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~~va~~  222 (247)
T PRK05565        150 ------SCEVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSEEDKEGLAE-EIPLGRLGKPEEIAKV  222 (247)
T ss_pred             ------CCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccChHHHHHHHh-cCCCCCCCCHHHHHHH
Confidence                  123469999988776654       368999999999997664321110000 0001 1122346799999999


Q ss_pred             HHHHHhCCC-CccCcEEEEecCC
Q 016901          292 LACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       292 i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      ++.++.... ...++++++.++.
T Consensus       223 ~~~l~~~~~~~~~g~~~~~~~~~  245 (247)
T PRK05565        223 VLFLASDDASYITGQIITVDGGW  245 (247)
T ss_pred             HHHHcCCccCCccCcEEEecCCc
Confidence            999987643 3467888887764

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.86  E-value=1.7e-20  Score=173.52  Aligned_cols=219  Identities=13%  Similarity=0.069  Sum_probs=155.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++++++||||+|+||+++++.|+++|++|++++|+.++.++..+.+....           ...++.++.+|++|.+++
T Consensus         5 l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~-----------~~~~~~~~~~Dl~~~~~~   73 (260)
T PRK07063          5 LAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDV-----------AGARVLAVPADVTDAASV   73 (260)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcc-----------CCceEEEEEccCCCHHHH
Confidence            467899999999999999999999999999999999887776665554210           114688999999999888


Q ss_pred             HHHhc-------CCCEEEEccccCccc------cCCCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCCCC
Q 016901          158 EPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~~~------~~~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~~~  220 (380)
                      .++++       .+|+||||||.....      ..++...+++|+.++.++++++.    +.+.++||++||....... 
T Consensus        74 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-  152 (260)
T PRK07063         74 AAAVAAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKII-  152 (260)
T ss_pred             HHHHHHHHHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCC-
Confidence            77663       699999999964221      11234447889999988888764    3455799999997553221 


Q ss_pred             chhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCccc--cc--c-c-ceeeccCCcccCCCCCHHH
Q 016901          221 PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAY--KE--T-H-NITLSQEDTLFGGQVSNLQ  287 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~--~~--~-~-~~~~~~~~~~~~~~i~~~D  287 (380)
                           .....|+.+|++.+.+++.       .|++++.|+||++.++....  ..  . . ...........+.+..++|
T Consensus       153 -----~~~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~  227 (260)
T PRK07063        153 -----PGCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPMKRIGRPEE  227 (260)
T ss_pred             -----CCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCCCCCCCHHH
Confidence                 2334699999999988752       68999999999997763210  00  0 0 0000001112234678999


Q ss_pred             HHHHHHHHHhCCC-CccCcEEEEecCC
Q 016901          288 VAELLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       288 vA~~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      +|.+++.++.+.. ...|+.+.+-++.
T Consensus       228 va~~~~fl~s~~~~~itG~~i~vdgg~  254 (260)
T PRK07063        228 VAMTAVFLASDEAPFINATCITIDGGR  254 (260)
T ss_pred             HHHHHHHHcCccccccCCcEEEECCCe
Confidence            9999999987643 3467777776664

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.86  E-value=1.2e-20  Score=173.14  Aligned_cols=215  Identities=15%  Similarity=0.178  Sum_probs=146.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEe-CCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGV-RSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~-R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      +++++||||+|+||++++++|+++|++|++.. |+++........+...+             .++.++.+|++|.+++.
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~-------------~~~~~~~~Dl~~~~~~~   68 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQG-------------GEALAVAADVADEADVL   68 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCC-------------CcEEEEEeccCCHHHHH
Confidence            36899999999999999999999999988776 44444444444333211             45788999999998888


Q ss_pred             HHhc-------CCCEEEEccccCccc--cC-----CCCCcchhhHHHHHHHHHHHHHc------C-CCEEEEEccCCCCC
Q 016901          159 PALG-------NASVVICCIGASEKE--VF-----DITGPYRIDFQATKNLVDAATIA------K-VNHFIMVSSLGTNK  217 (380)
Q Consensus       159 ~a~~-------~~d~Vi~~Ag~~~~~--~~-----~~~~~~~~nv~g~~~ll~a~~~~------~-v~r~V~~SS~~~~~  217 (380)
                      +++.       .+|+||||||.....  ..     ++...+++|+.++.++++++...      + .++||++||.+...
T Consensus        69 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~  148 (248)
T PRK06123         69 RLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARL  148 (248)
T ss_pred             HHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcC
Confidence            7764       689999999865321  11     22344889999999988887542      1 24799999975432


Q ss_pred             CCCchhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcccccc-cceeeccCCcccCCCCCHHHHH
Q 016901          218 FGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-HNITLSQEDTLFGGQVSNLQVA  289 (380)
Q Consensus       218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~~-~~~~~~~~~~~~~~~i~~~DvA  289 (380)
                      .. +    .....|+.+|.+.|.+++.       .|+++++||||++++|....... ................+++|++
T Consensus       149 ~~-~----~~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~d~a  223 (248)
T PRK06123        149 GS-P----GEYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGGEPGRVDRVKAGIPMGRGGTAEEVA  223 (248)
T ss_pred             CC-C----CCccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccCCHHHHHHHHhcCCCCCCcCHHHHH
Confidence            21 1    1113599999999987652       58999999999999984321100 0000000011122235789999


Q ss_pred             HHHHHHHhCCC-CccCcEEEEecC
Q 016901          290 ELLACMAKNRS-LSYCKVVEVIAE  312 (380)
Q Consensus       290 ~~i~~~l~~~~-~~~~~~~ni~~~  312 (380)
                      ++++.++.... ...+++|++.++
T Consensus       224 ~~~~~l~~~~~~~~~g~~~~~~gg  247 (248)
T PRK06123        224 RAILWLLSDEASYTTGTFIDVSGG  247 (248)
T ss_pred             HHHHHHhCccccCccCCEEeecCC
Confidence            99999987643 245788988765

>PRK06196 oxidoreductase; Provisional

Probab=99.86  E-value=1.8e-20  Score=178.37  Aligned_cols=206  Identities=17%  Similarity=0.149  Sum_probs=142.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++++|+||||+|+||++++++|+++|++|++++|+.++.++..+.+                 .++.++.+|++|.+++
T Consensus        24 l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l-----------------~~v~~~~~Dl~d~~~v   86 (315)
T PRK06196         24 LSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGI-----------------DGVEVVMLDLADLESV   86 (315)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----------------hhCeEEEccCCCHHHH
Confidence            35689999999999999999999999999999999987766554322                 2478899999999888


Q ss_pred             HHHh-------cCCCEEEEccccCccc----cCCCCCcchhhHHHHHHHHH----HHHHcCCCEEEEEccCCCCCCCCc-
Q 016901          158 EPAL-------GNASVVICCIGASEKE----VFDITGPYRIDFQATKNLVD----AATIAKVNHFIMVSSLGTNKFGFP-  221 (380)
Q Consensus       158 ~~a~-------~~~d~Vi~~Ag~~~~~----~~~~~~~~~~nv~g~~~ll~----a~~~~~v~r~V~~SS~~~~~~~~~-  221 (380)
                      ++++       +++|+||||||.....    ...++..+++|+.|+..+++    .+++.+.++||++||.+....... 
T Consensus        87 ~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~  166 (315)
T PRK06196         87 RAFAERFLDSGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRW  166 (315)
T ss_pred             HHHHHHHHhcCCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCc
Confidence            7766       4689999999964321    11233447899999666555    445555579999999754211110 


Q ss_pred             -----hhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccccccc-ce---eeccCCcccC-CCCC
Q 016901          222 -----AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH-NI---TLSQEDTLFG-GQVS  284 (380)
Q Consensus       222 -----~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~-~~---~~~~~~~~~~-~~i~  284 (380)
                           .....+...|+.+|.+.+.+.+       ..|+++++|+||++.+|........ ..   .+........ ...+
T Consensus       167 ~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (315)
T PRK06196        167 DDPHFTRGYDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHGNPIDPGFKT  246 (315)
T ss_pred             cccCccCCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhhhhhhhhhcCC
Confidence                 1123345679999999887654       2689999999999998853211100 00   0000000111 2467


Q ss_pred             HHHHHHHHHHHHhCCC
Q 016901          285 NLQVAELLACMAKNRS  300 (380)
Q Consensus       285 ~~DvA~~i~~~l~~~~  300 (380)
                      ++|+|..++.++..+.
T Consensus       247 ~~~~a~~~~~l~~~~~  262 (315)
T PRK06196        247 PAQGAATQVWAATSPQ  262 (315)
T ss_pred             HhHHHHHHHHHhcCCc
Confidence            8999999999997654

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.86  E-value=6.5e-20  Score=175.39  Aligned_cols=201  Identities=15%  Similarity=0.104  Sum_probs=147.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +.+++|+||||+|+||+++++.|+++|++|++++|++++++++.+.++..+             .++.++.+|++|.+++
T Consensus         5 l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g-------------~~~~~~~~Dv~d~~~v   71 (330)
T PRK06139          5 LHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALG-------------AEVLVVPTDVTDADQV   71 (330)
T ss_pred             CCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-------------CcEEEEEeeCCCHHHH
Confidence            467899999999999999999999999999999999988877766555432             4688899999999888


Q ss_pred             HHHh-------cCCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCCCC
Q 016901          158 EPAL-------GNASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       158 ~~a~-------~~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~~~  220 (380)
                      ++++       +++|++|||||.......      ++...+++|+.|+.++++++    ++.+..+||++||.+..... 
T Consensus        72 ~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~-  150 (330)
T PRK06139         72 KALATQAASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQ-  150 (330)
T ss_pred             HHHHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCC-
Confidence            8776       568999999996432221      22334789999988877765    45556789999997653211 


Q ss_pred             chhhhchhhHHHHHHHHHHHHHH-------H-CCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHH
Q 016901          221 PAAILNLFWGVLLWKRKAEEALI-------A-SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELL  292 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~-~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i  292 (380)
                           .....|+.+|.+.+.+.+       . .|++++.|.||.+.+|......  .. ...........++++|+|+++
T Consensus       151 -----p~~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~--~~-~~~~~~~~~~~~~pe~vA~~i  222 (330)
T PRK06139        151 -----PYAAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGA--NY-TGRRLTPPPPVYDPRRVAKAV  222 (330)
T ss_pred             -----CCchhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccccc--cc-ccccccCCCCCCCHHHHHHHH
Confidence                 223579999998765543       2 3899999999999988432111  00 011111112357999999999


Q ss_pred             HHHHhCCC
Q 016901          293 ACMAKNRS  300 (380)
Q Consensus       293 ~~~l~~~~  300 (380)
                      +.++.++.
T Consensus       223 l~~~~~~~  230 (330)
T PRK06139        223 VRLADRPR  230 (330)
T ss_pred             HHHHhCCC
Confidence            99998765

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.86  E-value=2.3e-20  Score=171.96  Aligned_cols=218  Identities=15%  Similarity=0.127  Sum_probs=154.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      ++++++|||||+|+||.+++++|+++|++|+++.|+.++.+.+.+.++..+             .++.++.+|++|.+++
T Consensus         7 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-------------~~~~~~~~D~~~~~~~   73 (253)
T PRK05867          7 LHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSG-------------GKVVPVCCDVSQHQQV   73 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC-------------CeEEEEEccCCCHHHH
Confidence            467899999999999999999999999999999999887776665544321             4688899999999888


Q ss_pred             HHHh-------cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHH----HcC-CCEEEEEccCCCCCCC
Q 016901          158 EPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAK-VNHFIMVSSLGTNKFG  219 (380)
Q Consensus       158 ~~a~-------~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~----~~~-v~r~V~~SS~~~~~~~  219 (380)
                      .+++       +.+|+||||||......      .++...+++|+.++..+++++.    +.+ -+++|++||.......
T Consensus        74 ~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~  153 (253)
T PRK05867         74 TSMLDQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIIN  153 (253)
T ss_pred             HHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCC
Confidence            7765       47999999999653221      1223346799999988888764    233 2479999986542211


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHH
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELL  292 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i  292 (380)
                      .+    .....|+.+|.+.+.+.+       ..|++++.|+||.+.++............ ......+.+..++|+|+++
T Consensus       154 ~~----~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~~~~~~~-~~~~~~~r~~~p~~va~~~  228 (253)
T PRK05867        154 VP----QQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYTEYQPLW-EPKIPLGRLGRPEELAGLY  228 (253)
T ss_pred             CC----CCccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccchHHHHHH-HhcCCCCCCcCHHHHHHHH
Confidence            11    123469999999998776       26899999999999877421100000000 1111234568999999999


Q ss_pred             HHHHhCC-CCccCcEEEEecCC
Q 016901          293 ACMAKNR-SLSYCKVVEVIAET  313 (380)
Q Consensus       293 ~~~l~~~-~~~~~~~~ni~~~~  313 (380)
                      ..++... ....|+++.+-+|.
T Consensus       229 ~~L~s~~~~~~tG~~i~vdgG~  250 (253)
T PRK05867        229 LYLASEASSYMTGSDIVIDGGY  250 (253)
T ss_pred             HHHcCcccCCcCCCeEEECCCc
Confidence            9999753 33467888777664

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.86  E-value=1.6e-20  Score=173.36  Aligned_cols=216  Identities=13%  Similarity=0.072  Sum_probs=151.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      ++++++|||||+|+||++++++|+++|++|++++|++++. +..+.+...+             .++.++.+|++|.+++
T Consensus         5 l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~-------------~~~~~~~~D~~~~~~~   70 (258)
T PRK08628          5 LKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQ-------------PRAEFVQVDLTDDAQC   70 (258)
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcC-------------CceEEEEccCCCHHHH
Confidence            4678999999999999999999999999999999988765 3333333211             5688999999999888


Q ss_pred             HHHhc-------CCCEEEEccccCcccc-----CCCCCcchhhHHHHHHHHHHHHH---cCCCEEEEEccCCCCCCCCch
Q 016901          158 EPALG-------NASVVICCIGASEKEV-----FDITGPYRIDFQATKNLVDAATI---AKVNHFIMVSSLGTNKFGFPA  222 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~~~~-----~~~~~~~~~nv~g~~~ll~a~~~---~~v~r~V~~SS~~~~~~~~~~  222 (380)
                      .++++       ++|+||||||......     .++...+++|+.+..++++++..   .+.++||++||.......   
T Consensus        71 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~---  147 (258)
T PRK08628         71 RDAVEQTVAKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQ---  147 (258)
T ss_pred             HHHHHHHHHhcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCC---
Confidence            87763       6899999998542211     12233477899999888887643   234689999997653221   


Q ss_pred             hhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccc-cc---ccc--e-eeccCCcccCCCCCHHHH
Q 016901          223 AILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAY-KE---THN--I-TLSQEDTLFGGQVSNLQV  288 (380)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~-~~---~~~--~-~~~~~~~~~~~~i~~~Dv  288 (380)
                         .....|+.+|...+.+++       ..|++++.|+||++++|.... ..   ...  . ...........+++++|+
T Consensus       148 ---~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  224 (258)
T PRK08628        148 ---GGTSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGHRMTTAEEI  224 (258)
T ss_pred             ---CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCCccccCCCHHHH
Confidence               234579999999998775       268999999999999884210 00   000  0 000001111246889999


Q ss_pred             HHHHHHHHhCCC-CccCcEEEEecCC
Q 016901          289 AELLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       289 A~~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      |++++.++.... ...+..|.+.++.
T Consensus       225 a~~~~~l~~~~~~~~~g~~~~~~gg~  250 (258)
T PRK08628        225 ADTAVFLLSERSSHTTGQWLFVDGGY  250 (258)
T ss_pred             HHHHHHHhChhhccccCceEEecCCc
Confidence            999999997653 2356777776553

>PRK08643 acetoin reductase; Validated

Probab=99.86  E-value=6.1e-20  Score=169.29  Aligned_cols=215  Identities=17%  Similarity=0.120  Sum_probs=150.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      +++++||||+|+||+++++.|+++|++|++++|+.++...+...+...+             .++.++.+|++|++++.+
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~Dl~~~~~~~~   68 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDG-------------GKAIAVKADVSDRDQVFA   68 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------------CeEEEEECCCCCHHHHHH
Confidence            5789999999999999999999999999999999877666655444321             468889999999988777


Q ss_pred             Hh-------cCCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHHHH----cC-CCEEEEEccCCCCCCCCc
Q 016901          160 AL-------GNASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAATI----AK-VNHFIMVSSLGTNKFGFP  221 (380)
Q Consensus       160 a~-------~~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~~~----~~-v~r~V~~SS~~~~~~~~~  221 (380)
                      ++       +++|+||||||.......      ++...+++|+.++..+++++..    .+ ..++|++||...... . 
T Consensus        69 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-~-  146 (256)
T PRK08643         69 AVRQVVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVG-N-  146 (256)
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccC-C-
Confidence            66       368999999986432211      1233477899998877766643    23 358999999765321 1 


Q ss_pred             hhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccccc---------ccce--eeccCCcccCCCC
Q 016901          222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE---------THNI--TLSQEDTLFGGQV  283 (380)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~---------~~~~--~~~~~~~~~~~~i  283 (380)
                          .....|+.+|.+.+.+++       ..|++++.|+||++.+|......         ....  .........+.+.
T Consensus       147 ----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (256)
T PRK08643        147 ----PELAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLGRLS  222 (256)
T ss_pred             ----CCCchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccCCCCCCc
Confidence                123469999999887665       36899999999999887421100         0000  0000112234467


Q ss_pred             CHHHHHHHHHHHHhCCC-CccCcEEEEecCC
Q 016901          284 SNLQVAELLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       284 ~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      .++|+|.++..++.... ...|.++.+-++.
T Consensus       223 ~~~~va~~~~~L~~~~~~~~~G~~i~vdgg~  253 (256)
T PRK08643        223 EPEDVANCVSFLAGPDSDYITGQTIIVDGGM  253 (256)
T ss_pred             CHHHHHHHHHHHhCccccCccCcEEEeCCCe
Confidence            89999999999987543 3467777776654

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.86  E-value=6.7e-21  Score=198.96  Aligned_cols=208  Identities=12%  Similarity=-0.007  Sum_probs=148.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ..|+||||||+||||++|++.|.++|++|...                                     .+|++|.+.+.
T Consensus       379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~-------------------------------------~~~l~d~~~v~  421 (668)
T PLN02260        379 PSLKFLIYGRTGWIGGLLGKLCEKQGIAYEYG-------------------------------------KGRLEDRSSLL  421 (668)
T ss_pred             CCceEEEECCCchHHHHHHHHHHhCCCeEEee-------------------------------------ccccccHHHHH
Confidence            45789999999999999999999999987311                                     14567777777


Q ss_pred             HHhc--CCCEEEEccccCccc-----cCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCC-----------C
Q 016901          159 PALG--NASVVICCIGASEKE-----VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----------F  220 (380)
Q Consensus       159 ~a~~--~~d~Vi~~Ag~~~~~-----~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~-----------~  220 (380)
                      +.+.  ++|+|||||+.....     ..++...+++|+.|+.+++++|++.|++ +|++||..++.++           .
T Consensus       422 ~~i~~~~pd~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~~-~v~~Ss~~v~~~~~~~~~~~~~p~~  500 (668)
T PLN02260        422 ADIRNVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGLL-MMNFATGCIFEYDAKHPEGSGIGFK  500 (668)
T ss_pred             HHHHhhCCCEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCCe-EEEEcccceecCCcccccccCCCCC
Confidence            7775  689999999865321     1244556889999999999999999985 6677775553321           1


Q ss_pred             chhhh-chhhHHHHHHHHHHHHHHHCCCCEEEEecCcccCCCc----ccccccceeeccCCcccCCCCCHHHHHHHHHHH
Q 016901          221 PAAIL-NLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTD----AYKETHNITLSQEDTLFGGQVSNLQVAELLACM  295 (380)
Q Consensus       221 ~~~~~-~~~~~Y~~sK~~~E~~l~~~g~~~~ivRpg~v~gp~~----~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~  295 (380)
                      ++... .+.+.|+.+|+++|++++.+ -++.++|+.++|+...    ++... .+.......+..+..+++|++.+++.+
T Consensus       501 E~~~~~~~~~~Yg~sK~~~E~~~~~~-~~~~~~r~~~~~~~~~~~~~nfv~~-~~~~~~~~~vp~~~~~~~~~~~~~~~l  578 (668)
T PLN02260        501 EEDKPNFTGSFYSKTKAMVEELLREY-DNVCTLRVRMPISSDLSNPRNFITK-ISRYNKVVNIPNSMTVLDELLPISIEM  578 (668)
T ss_pred             cCCCCCCCCChhhHHHHHHHHHHHhh-hhheEEEEEEecccCCCCccHHHHH-HhccceeeccCCCceehhhHHHHHHHH
Confidence            11122 23478999999999999876 4678888888886421    11100 000111111223567788888888888


Q ss_pred             HhCCCCccCcEEEEecCCCCCcchHHHHHHhcCC
Q 016901          296 AKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPS  329 (380)
Q Consensus       296 l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~  329 (380)
                      ++...   +++||++++...|+.|+++.+.+..+
T Consensus       579 ~~~~~---~giyni~~~~~~s~~e~a~~i~~~~~  609 (668)
T PLN02260        579 AKRNL---RGIWNFTNPGVVSHNEILEMYKDYID  609 (668)
T ss_pred             HHhCC---CceEEecCCCcCcHHHHHHHHHHhcC
Confidence            87433   68999999999999999999988764

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.86  E-value=5.1e-20  Score=169.86  Aligned_cols=193  Identities=17%  Similarity=0.154  Sum_probs=141.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCCchh-HHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQR-AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G-~~V~~l~R~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ++++|+||||+|+||++++++|+++| ++|++++|++++ .+++.+.++..+            ..+++++.+|++|.++
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~------------~~~v~~~~~D~~~~~~   74 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAG------------ASSVEVIDFDALDTDS   74 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcC------------CCceEEEEecCCChHH
Confidence            56789999999999999999999995 999999999876 666555444321            1368999999999887


Q ss_pred             HHHHh------cCCCEEEEccccCccccCCCC------CcchhhHHHHHH----HHHHHHHcCCCEEEEEccCCCCCCCC
Q 016901          157 IEPAL------GNASVVICCIGASEKEVFDIT------GPYRIDFQATKN----LVDAATIAKVNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       157 ~~~a~------~~~d~Vi~~Ag~~~~~~~~~~------~~~~~nv~g~~~----ll~a~~~~~v~r~V~~SS~~~~~~~~  220 (380)
                      +.+++      +++|++|||+|..........      +.+++|+.++..    +++++++.+.++||++||......  
T Consensus        75 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~--  152 (253)
T PRK07904         75 HPKVIDAAFAGGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERV--  152 (253)
T ss_pred             HHHHHHHHHhcCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCC--
Confidence            65544      369999999987533211111      237889988776    566677777789999999754221  


Q ss_pred             chhhhchhhHHHHHHHHHHHHH-------HHCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHH
Q 016901          221 PAAILNLFWGVLLWKRKAEEAL-------IASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA  293 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l-------~~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~  293 (380)
                          ......|+.+|++...+.       +.+|+++++++||++..+....     .  .  .  ....++++|+|+.++
T Consensus       153 ----~~~~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~-----~--~--~--~~~~~~~~~~A~~i~  217 (253)
T PRK07904        153 ----RRSNFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAH-----A--K--E--APLTVDKEDVAKLAV  217 (253)
T ss_pred             ----CCCCcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhcc-----C--C--C--CCCCCCHHHHHHHHH
Confidence                112245999999887543       3479999999999998763210     0  0  0  013589999999999


Q ss_pred             HHHhCCC
Q 016901          294 CMAKNRS  300 (380)
Q Consensus       294 ~~l~~~~  300 (380)
                      .++.++.
T Consensus       218 ~~~~~~~  224 (253)
T PRK07904        218 TAVAKGK  224 (253)
T ss_pred             HHHHcCC
Confidence            9998765

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.86  E-value=4.1e-20  Score=170.45  Aligned_cols=218  Identities=13%  Similarity=0.143  Sum_probs=156.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +.+++|+||||+|+||+++++.|+++|++|++++|+.+..+.+...++..+             .++.++.+|++|.+++
T Consensus         9 l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~-------------~~~~~~~~D~~~~~~i   75 (255)
T PRK06113          9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLG-------------GQAFACRCDITSEQEL   75 (255)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcC-------------CcEEEEEccCCCHHHH
Confidence            467899999999999999999999999999999998877766655544321             4688899999999888


Q ss_pred             HHHh-------cCCCEEEEccccCccccC-----CCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCCCCc
Q 016901          158 EPAL-------GNASVVICCIGASEKEVF-----DITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFP  221 (380)
Q Consensus       158 ~~a~-------~~~d~Vi~~Ag~~~~~~~-----~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~~~~  221 (380)
                      .+++       .++|+||||||.......     ++...+++|+.++.++++++.    +.+.+++|++||......   
T Consensus        76 ~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~---  152 (255)
T PRK06113         76 SALADFALSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENK---  152 (255)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCC---
Confidence            7765       358999999996432211     222337899999999999875    344569999999765321   


Q ss_pred             hhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccce-eeccCCcccCCCCCHHHHHHHHH
Q 016901          222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNI-TLSQEDTLFGGQVSNLQVAELLA  293 (380)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~-~~~~~~~~~~~~i~~~DvA~~i~  293 (380)
                         ......|+.+|.+.+.+++       ..|+++++|.||.+..+.......... ...........+..++|+++++.
T Consensus       153 ---~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~  229 (255)
T PRK06113        153 ---NINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAAL  229 (255)
T ss_pred             ---CCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence               1233469999999998875       268999999999998763211000000 00011112234679999999999


Q ss_pred             HHHhCCC-CccCcEEEEecCCC
Q 016901          294 CMAKNRS-LSYCKVVEVIAETT  314 (380)
Q Consensus       294 ~~l~~~~-~~~~~~~ni~~~~~  314 (380)
                      .++.... ...|+++++.++..
T Consensus       230 ~l~~~~~~~~~G~~i~~~gg~~  251 (255)
T PRK06113        230 FLCSPAASWVSGQILTVSGGGV  251 (255)
T ss_pred             HHcCccccCccCCEEEECCCcc
Confidence            9987532 34688898888753

>PRK12743 oxidoreductase; Provisional

Probab=99.86  E-value=5.6e-20  Score=169.74  Aligned_cols=215  Identities=16%  Similarity=0.154  Sum_probs=150.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-CchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVR-SVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      +++|+||||+|+||++++++|+++|++|+++.| +.+..+.+.+.++..+             .++.++.+|++|.++++
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~Dl~~~~~~~   68 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHG-------------VRAEIRQLDLSDLPEGA   68 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcC-------------CceEEEEccCCCHHHHH
Confidence            468999999999999999999999999988865 4445555544443321             57889999999998877


Q ss_pred             HHh-------cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHHHc----C-CCEEEEEccCCCCCCCC
Q 016901          159 PAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIA----K-VNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       159 ~a~-------~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~~~----~-v~r~V~~SS~~~~~~~~  220 (380)
                      +++       +.+|+||||||......      .++...+++|+.++.++++++...    + -++||++||......  
T Consensus        69 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~--  146 (256)
T PRK12743         69 QALDKLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTP--  146 (256)
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCC--
Confidence            665       35899999998653221      123344789999999999877542    2 358999999765322  


Q ss_pred             chhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHH
Q 016901          221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA  293 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~  293 (380)
                          ..+...|+.+|.+.+.+++       ..|++++.|+||.++++...................+...+++|+|.++.
T Consensus       147 ----~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  222 (256)
T PRK12743        147 ----LPGASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDDSDVKPDSRPGIPLGRPGDTHEIASLVA  222 (256)
T ss_pred             ----CCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccChHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence                1234579999999987765       36899999999999987421110000000011112234578999999999


Q ss_pred             HHHhCCC-CccCcEEEEecCC
Q 016901          294 CMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       294 ~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      .++.... ...|.++.+.++.
T Consensus       223 ~l~~~~~~~~~G~~~~~dgg~  243 (256)
T PRK12743        223 WLCSEGASYTTGQSLIVDGGF  243 (256)
T ss_pred             HHhCccccCcCCcEEEECCCc
Confidence            9887543 2357777777664

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.86  E-value=3.6e-20  Score=170.42  Aligned_cols=217  Identities=13%  Similarity=0.138  Sum_probs=152.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .+++++|+||||+|+||.+++++|+++|++|++++|+.++.+.+.+.+...+             .++.++++|++|.++
T Consensus         5 ~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~D~~~~~~   71 (252)
T PRK07035          5 DLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAG-------------GKAEALACHIGEMEQ   71 (252)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------------CeEEEEEcCCCCHHH
Confidence            3467899999999999999999999999999999999877766665544321             457789999999887


Q ss_pred             HHHHh-------cCCCEEEEccccCcc-------ccCCCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCC
Q 016901          157 IEPAL-------GNASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKF  218 (380)
Q Consensus       157 ~~~a~-------~~~d~Vi~~Ag~~~~-------~~~~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~  218 (380)
                      +++++       +.+|+||||||....       ...+++..+++|+.++..+++++    ++.+.+++|++||......
T Consensus        72 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~  151 (252)
T PRK07035         72 IDALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSP  151 (252)
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCC
Confidence            77665       358999999985321       11112345788999988877666    4455679999999654321


Q ss_pred             CCchhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcccc-cc-cceeeccCCcccCCCCCHHHHH
Q 016901          219 GFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-ET-HNITLSQEDTLFGGQVSNLQVA  289 (380)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~-~~-~~~~~~~~~~~~~~~i~~~DvA  289 (380)
                      .      .....|+.+|++++.+++.       .|++++.|.||.+.++..... .. .................++|+|
T Consensus       152 ~------~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va  225 (252)
T PRK07035        152 G------DFQGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDAILKQALAHIPLRRHAEPSEMA  225 (252)
T ss_pred             C------CCCcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHHHHHHHHccCCCCCcCCHHHHH
Confidence            1      2335699999999988762       589999999999977632110 00 0000000111233467899999


Q ss_pred             HHHHHHHhCCC-CccCcEEEEecC
Q 016901          290 ELLACMAKNRS-LSYCKVVEVIAE  312 (380)
Q Consensus       290 ~~i~~~l~~~~-~~~~~~~ni~~~  312 (380)
                      +.+..++.+.. ...|+++++-++
T Consensus       226 ~~~~~l~~~~~~~~~g~~~~~dgg  249 (252)
T PRK07035        226 GAVLYLASDASSYTTGECLNVDGG  249 (252)
T ss_pred             HHHHHHhCccccCccCCEEEeCCC
Confidence            99999997653 246777777655

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.86  E-value=2.6e-20  Score=170.81  Aligned_cols=213  Identities=15%  Similarity=0.141  Sum_probs=147.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++++++||||+|+||++++++|+++|++|++++|+.+...+..+.+                ..++.++++|++|.+++
T Consensus         4 ~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~----------------~~~~~~~~~D~~~~~~~   67 (249)
T PRK06500          4 LQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL----------------GESALVIRADAGDVAAQ   67 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh----------------CCceEEEEecCCCHHHH
Confidence            45689999999999999999999999999999999876655443321                14678899999998766


Q ss_pred             HHHh-------cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHHHc--CCCEEEEEccCCCCCCCCch
Q 016901          158 EPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFPA  222 (380)
Q Consensus       158 ~~a~-------~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~~~--~v~r~V~~SS~~~~~~~~~~  222 (380)
                      ..++       +++|+||||||......      .++...+++|+.++.++++++...  ...++|++||.... ++.  
T Consensus        68 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~-~~~--  144 (249)
T PRK06500         68 KALAQALAEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAH-IGM--  144 (249)
T ss_pred             HHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhc-cCC--
Confidence            5544       46899999998643221      123345789999999999999742  23578888875432 111  


Q ss_pred             hhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccc--ccccee-e---ccCCcccCCCCCHHHHH
Q 016901          223 AILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK--ETHNIT-L---SQEDTLFGGQVSNLQVA  289 (380)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~--~~~~~~-~---~~~~~~~~~~i~~~DvA  289 (380)
                         .....|+.+|.+.|.+++       ..|++++++|||.+++|.....  ...... .   .........+.+++|+|
T Consensus       145 ---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va  221 (249)
T PRK06500        145 ---PNSSVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLGRFGTPEEIA  221 (249)
T ss_pred             ---CCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCCCCcCHHHHH
Confidence               223579999999998874       2589999999999998742110  000000 0   00011122356899999


Q ss_pred             HHHHHHHhCCC-CccCcEEEEecC
Q 016901          290 ELLACMAKNRS-LSYCKVVEVIAE  312 (380)
Q Consensus       290 ~~i~~~l~~~~-~~~~~~~ni~~~  312 (380)
                      +++..++.+.. ...+..+.+.++
T Consensus       222 ~~~~~l~~~~~~~~~g~~i~~~gg  245 (249)
T PRK06500        222 KAVLYLASDESAFIVGSEIIVDGG  245 (249)
T ss_pred             HHHHHHcCccccCccCCeEEECCC
Confidence            99999987543 334666666555

>PRK08589 short chain dehydrogenase; Validated

Probab=99.86  E-value=5e-20  Score=171.70  Aligned_cols=216  Identities=17%  Similarity=0.152  Sum_probs=150.4

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .++++++|||||+|+||+++++.|+++|++|+++.|+ +...+..+.++..+             .++.++.+|++|.++
T Consensus         3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~-------------~~~~~~~~Dl~~~~~   68 (272)
T PRK08589          3 RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNG-------------GKAKAYHVDISDEQQ   68 (272)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcC-------------CeEEEEEeecCCHHH
Confidence            3467899999999999999999999999999999999 66655555443221             468899999999988


Q ss_pred             HHHHh-------cCCCEEEEccccCcc-c-cC-----CCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCC
Q 016901          157 IEPAL-------GNASVVICCIGASEK-E-VF-----DITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKF  218 (380)
Q Consensus       157 ~~~a~-------~~~d~Vi~~Ag~~~~-~-~~-----~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~  218 (380)
                      +.+++       +.+|+||||||.... . ..     .+...+++|+.++..+++++    ++.+ +++|++||......
T Consensus        69 ~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~  147 (272)
T PRK08589         69 VKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAA  147 (272)
T ss_pred             HHHHHHHHHHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCC
Confidence            77665       458999999986421 1 11     12334678998887766654    3444 68999999765322


Q ss_pred             CCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccc-cccc----eeec---cCCcccCCCC
Q 016901          219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-ETHN----ITLS---QEDTLFGGQV  283 (380)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~-~~~~----~~~~---~~~~~~~~~i  283 (380)
                      .      .....|+.+|.+.+.+++       ..|++++.|.||.+.++..... ....    ..+.   ......+.+.
T Consensus       148 ~------~~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (272)
T PRK08589        148 D------LYRSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLG  221 (272)
T ss_pred             C------CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccCCCCCCc
Confidence            1      123469999999998775       2689999999999987742110 0000    0000   0011223457


Q ss_pred             CHHHHHHHHHHHHhCC-CCccCcEEEEecCC
Q 016901          284 SNLQVAELLACMAKNR-SLSYCKVVEVIAET  313 (380)
Q Consensus       284 ~~~DvA~~i~~~l~~~-~~~~~~~~ni~~~~  313 (380)
                      +++|+|+++..++.+. ....|+++.+.++.
T Consensus       222 ~~~~va~~~~~l~s~~~~~~~G~~i~vdgg~  252 (272)
T PRK08589        222 KPEEVAKLVVFLASDDSSFITGETIRIDGGV  252 (272)
T ss_pred             CHHHHHHHHHHHcCchhcCcCCCEEEECCCc
Confidence            8999999999998753 23467777777664

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.86  E-value=3.5e-20  Score=173.17  Aligned_cols=217  Identities=17%  Similarity=0.136  Sum_probs=152.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +.+++++||||+|+||++++++|+++|++|++++|+.+..+.+.+.+...+             .++.++++|++|.+++
T Consensus         8 ~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~Dl~~~~~v   74 (278)
T PRK08277          8 LKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAG-------------GEALAVKADVLDKESL   74 (278)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------------CeEEEEECCCCCHHHH
Confidence            356899999999999999999999999999999999877666655443221             4688999999998877


Q ss_pred             HHHh-------cCCCEEEEccccCcccc---------------------CCCCCcchhhHHHHHHHHHH----HHHcCCC
Q 016901          158 EPAL-------GNASVVICCIGASEKEV---------------------FDITGPYRIDFQATKNLVDA----ATIAKVN  205 (380)
Q Consensus       158 ~~a~-------~~~d~Vi~~Ag~~~~~~---------------------~~~~~~~~~nv~g~~~ll~a----~~~~~v~  205 (380)
                      .+++       +.+|+||||||......                     .++...+++|+.++..++++    +.+.+.+
T Consensus        75 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g  154 (278)
T PRK08277         75 EQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGG  154 (278)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCc
Confidence            7665       46899999998532110                     11223467899988766554    4455567


Q ss_pred             EEEEEccCCCCCCCCchhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCccccc--c-cce----e
Q 016901          206 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE--T-HNI----T  271 (380)
Q Consensus       206 r~V~~SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~--~-~~~----~  271 (380)
                      +||++||......      ......|+.+|.+.+.+++.       .|+++++|+||++.++......  . ...    .
T Consensus       155 ~ii~isS~~~~~~------~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~  228 (278)
T PRK08277        155 NIINISSMNAFTP------LTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERAN  228 (278)
T ss_pred             EEEEEccchhcCC------CCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHH
Confidence            9999999866432      12345699999999988762       5899999999999887431100  0 000    0


Q ss_pred             eccCCcccCCCCCHHHHHHHHHHHHhC-C-CCccCcEEEEecCC
Q 016901          272 LSQEDTLFGGQVSNLQVAELLACMAKN-R-SLSYCKVVEVIAET  313 (380)
Q Consensus       272 ~~~~~~~~~~~i~~~DvA~~i~~~l~~-~-~~~~~~~~ni~~~~  313 (380)
                      ........+.+..++|+|++++.++.. . ....|..+.+-++.
T Consensus       229 ~~~~~~p~~r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdgG~  272 (278)
T PRK08277        229 KILAHTPMGRFGKPEELLGTLLWLADEKASSFVTGVVLPVDGGF  272 (278)
T ss_pred             HHhccCCccCCCCHHHHHHHHHHHcCccccCCcCCCEEEECCCe
Confidence            000111234567899999999998876 3 33467788776653

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.86  E-value=8e-20  Score=168.82  Aligned_cols=215  Identities=14%  Similarity=0.118  Sum_probs=151.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +.+++||||||+|+||.+++++|+++|++|+++.|+ .+.+.+.+.+...             ..++.++.+|++|.+++
T Consensus        13 l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~i   78 (258)
T PRK06935         13 LDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKE-------------GRKVTFVQVDLTKPESA   78 (258)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhc-------------CCceEEEEcCCCCHHHH
Confidence            467899999999999999999999999999999998 4444444433321             14688999999999888


Q ss_pred             HHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCCCC
Q 016901          158 EPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~~~  220 (380)
                      .++++       .+|++|||||......      .+++..+++|+.++.++++++    ++.+.+++|++||....... 
T Consensus        79 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-  157 (258)
T PRK06935         79 EKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGG-  157 (258)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCC-
Confidence            77764       6899999998643221      123344778999977777655    35556799999997653221 


Q ss_pred             chhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccc---eeeccCCcccCCCCCHHHHHH
Q 016901          221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHN---ITLSQEDTLFGGQVSNLQVAE  290 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~---~~~~~~~~~~~~~i~~~DvA~  290 (380)
                           .....|+.+|.+.+.+++       ..|+++++|+||.+.++.........   .... .....+.+..++|+|.
T Consensus       158 -----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~dva~  231 (258)
T PRK06935        158 -----KFVPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEIL-KRIPAGRWGEPDDLMG  231 (258)
T ss_pred             -----CCchhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHHHHHHH-hcCCCCCCCCHHHHHH
Confidence                 223469999999998765       26899999999999877422110000   0000 1112345788999999


Q ss_pred             HHHHHHhCCC-CccCcEEEEecCC
Q 016901          291 LLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       291 ~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      .+..++.+.. ...|.++.+-++.
T Consensus       232 ~~~~l~s~~~~~~~G~~i~~dgg~  255 (258)
T PRK06935        232 AAVFLASRASDYVNGHILAVDGGW  255 (258)
T ss_pred             HHHHHcChhhcCCCCCEEEECCCe
Confidence            9999887543 3467777776653

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.86  E-value=7.5e-20  Score=169.72  Aligned_cols=221  Identities=14%  Similarity=0.128  Sum_probs=155.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      ++++++|||||+|+||+++++.|+++|++|++++|+.++.++..+.+...            ...++.++.+|++|.+++
T Consensus         6 l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------------~~~~~~~~~~Dv~~~~~i   73 (263)
T PRK08339          6 LSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSE------------SNVDVSYIVADLTKREDL   73 (263)
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh------------cCCceEEEEecCCCHHHH
Confidence            36789999999999999999999999999999999988776666544321            014688999999999888


Q ss_pred             HHHhc------CCCEEEEccccCccc------cCCCCCcchhhHHHHHHHHH----HHHHcCCCEEEEEccCCCCCCCCc
Q 016901          158 EPALG------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVD----AATIAKVNHFIMVSSLGTNKFGFP  221 (380)
Q Consensus       158 ~~a~~------~~d~Vi~~Ag~~~~~------~~~~~~~~~~nv~g~~~ll~----a~~~~~v~r~V~~SS~~~~~~~~~  221 (380)
                      +++++      ++|++|||||.....      ..++...+++|+.+...+++    .+++.+.+++|++||......   
T Consensus        74 ~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~---  150 (263)
T PRK08339         74 ERTVKELKNIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEP---  150 (263)
T ss_pred             HHHHHHHHhhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCC---
Confidence            87763      589999999864321      12334457888887665554    445566679999999865321   


Q ss_pred             hhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccccc-----------ccceeeccCCcccCCCC
Q 016901          222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE-----------THNITLSQEDTLFGGQV  283 (380)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~-----------~~~~~~~~~~~~~~~~i  283 (380)
                         ......|+.+|.+.+.+.+       .+|++++.|.||.+.++......           .............+...
T Consensus       151 ---~~~~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~  227 (263)
T PRK08339        151 ---IPNIALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLG  227 (263)
T ss_pred             ---CCcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccCCcccCc
Confidence               1223469999999987765       37899999999999876321000           00000001111234567


Q ss_pred             CHHHHHHHHHHHHhCCC-CccCcEEEEecCCCCC
Q 016901          284 SNLQVAELLACMAKNRS-LSYCKVVEVIAETTAP  316 (380)
Q Consensus       284 ~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~~~s  316 (380)
                      .++|+|.++..++.+.. ...|+++.+-++...|
T Consensus       228 ~p~dva~~v~fL~s~~~~~itG~~~~vdgG~~~~  261 (263)
T PRK08339        228 EPEEIGYLVAFLASDLGSYINGAMIPVDGGRLNS  261 (263)
T ss_pred             CHHHHHHHHHHHhcchhcCccCceEEECCCcccc
Confidence            89999999999987643 3467888777766443

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.85  E-value=6.1e-20  Score=169.25  Aligned_cols=202  Identities=15%  Similarity=0.136  Sum_probs=141.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      +++||||||+|+||+++++.|+++|++|++++|++.+...+.+.....             ..++.++.+|++|++++.+
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~~~~   68 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARR-------------GLALRVEKLDLTDAIDRAQ   68 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-------------CCcceEEEeeCCCHHHHHH
Confidence            468999999999999999999999999999999987666554433221             1468899999999999998


Q ss_pred             Hhc-CCCEEEEccccCccccC------CCCCcchhhHHHHHHHHH----HHHHcCCCEEEEEccCCCCCCCCchhhhchh
Q 016901          160 ALG-NASVVICCIGASEKEVF------DITGPYRIDFQATKNLVD----AATIAKVNHFIMVSSLGTNKFGFPAAILNLF  228 (380)
Q Consensus       160 a~~-~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~----a~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~  228 (380)
                      ++. ++|+||||||.......      +....+++|+.++.++.+    .+++.+.++||++||.+.....      ...
T Consensus        69 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~------~~~  142 (257)
T PRK09291         69 AAEWDVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITG------PFT  142 (257)
T ss_pred             HhcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCC------CCc
Confidence            886 89999999986532211      122346788888766554    4456677899999997543211      123


Q ss_pred             hHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccc-cccc-ce------eec-cCCcccCCCCCHHHHHHHH
Q 016901          229 WGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAY-KETH-NI------TLS-QEDTLFGGQVSNLQVAELL  292 (380)
Q Consensus       229 ~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~-~~~~-~~------~~~-~~~~~~~~~i~~~DvA~~i  292 (380)
                      ..|+.+|.+.|.+++       ..|+++++||||++..+.... .... ..      .+. .......++++.+|+++.+
T Consensus       143 ~~Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (257)
T PRK09291        143 GAYCASKHALEAIAEAMHAELKPFGIQVATVNPGPYLTGFNDTMAETPKRWYDPARNFTDPEDLAFPLEQFDPQEMIDAM  222 (257)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccchhhhhhhhhhhcchhhHHHhhhhhhccccCCCHHHHHHHH
Confidence            469999999987654       369999999999986542110 0000 00      000 0111122458899999999


Q ss_pred             HHHHhCCC
Q 016901          293 ACMAKNRS  300 (380)
Q Consensus       293 ~~~l~~~~  300 (380)
                      +.++.++.
T Consensus       223 ~~~l~~~~  230 (257)
T PRK09291        223 VEVIPADT  230 (257)
T ss_pred             HHHhcCCC
Confidence            99887654

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.85  E-value=1.2e-19  Score=167.23  Aligned_cols=217  Identities=17%  Similarity=0.163  Sum_probs=154.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++++++||||+|+||++++++|+++|++|+++.|+.+....+...++..+             .++.++.+|++|.+++
T Consensus         9 ~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~Dl~~~~~~   75 (256)
T PRK06124          9 LAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAG-------------GAAEALAFDIADEEAV   75 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcC-------------CceEEEEccCCCHHHH
Confidence            467899999999999999999999999999999999877666655554321             4688999999999887


Q ss_pred             HHHh-------cCCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCCCC
Q 016901          158 EPAL-------GNASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       158 ~~a~-------~~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~~~  220 (380)
                      .+++       +.+|+||||+|.......      +++..+++|+.++.++++++.    +.+.++||++||....... 
T Consensus        76 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~-  154 (256)
T PRK06124         76 AAAFARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVAR-  154 (256)
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCC-
Confidence            7766       357999999996532211      223347889999988886654    4567899999997653221 


Q ss_pred             chhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccccc-ccce-eeccCCcccCCCCCHHHHHHH
Q 016901          221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE-THNI-TLSQEDTLFGGQVSNLQVAEL  291 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~-~~~~-~~~~~~~~~~~~i~~~DvA~~  291 (380)
                           .....|+.+|.+.+.+++       ..|++++.|+||.+.++...... .... .........+.+++++|++.+
T Consensus       155 -----~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  229 (256)
T PRK06124        155 -----AGDAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPAVGPWLAQRTPLGRWGRPEEIAGA  229 (256)
T ss_pred             -----CCccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChHHHHHHHhcCCCCCCCCHHHHHHH
Confidence                 123469999999887765       25899999999999987421100 0000 000111123467999999999


Q ss_pred             HHHHHhCCC-CccCcEEEEecCC
Q 016901          292 LACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       292 i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      ++.++.++. ...|+.+.+-++.
T Consensus       230 ~~~l~~~~~~~~~G~~i~~dgg~  252 (256)
T PRK06124        230 AVFLASPAASYVNGHVLAVDGGY  252 (256)
T ss_pred             HHHHcCcccCCcCCCEEEECCCc
Confidence            999998753 2356776665543

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.85  E-value=2.8e-20  Score=172.00  Aligned_cols=212  Identities=20%  Similarity=0.170  Sum_probs=149.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++++||||||+|+||++++++|+++|++|+++.|+.+...                      ..++.++++|++|.+++
T Consensus         7 ~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~~----------------------~~~~~~~~~D~~~~~~~   64 (260)
T PRK06523          7 LAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDDL----------------------PEGVEFVAADLTTAEGC   64 (260)
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhhc----------------------CCceeEEecCCCCHHHH
Confidence            46789999999999999999999999999999999864311                      14688999999998877


Q ss_pred             HHHh-------cCCCEEEEccccCccc--------cCCCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCC
Q 016901          158 EPAL-------GNASVVICCIGASEKE--------VFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKF  218 (380)
Q Consensus       158 ~~a~-------~~~d~Vi~~Ag~~~~~--------~~~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~  218 (380)
                      .+++       +++|+||||||.....        ..++...+++|+.++.++++++    ++.+.+++|++||......
T Consensus        65 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~  144 (260)
T PRK06523         65 AAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLP  144 (260)
T ss_pred             HHHHHHHHHHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCC
Confidence            6554       4689999999853211        1123444788999987776554    4556678999999765322


Q ss_pred             CCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccccc-----ccceeec---------cCCc
Q 016901          219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE-----THNITLS---------QEDT  277 (380)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~-----~~~~~~~---------~~~~  277 (380)
                      .     ......|+.+|.+++.+++       ..|+++++|+||++.+|......     .......         ....
T Consensus       145 ~-----~~~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (260)
T PRK06523        145 L-----PESTTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGI  219 (260)
T ss_pred             C-----CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccC
Confidence            1     1134579999999987765       26899999999999988531100     0000000         0011


Q ss_pred             ccCCCCCHHHHHHHHHHHHhCC-CCccCcEEEEecCCCCC
Q 016901          278 LFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAETTAP  316 (380)
Q Consensus       278 ~~~~~i~~~DvA~~i~~~l~~~-~~~~~~~~ni~~~~~~s  316 (380)
                      ..+.+..++|+|+++..++.+. ....++.+.+.++...+
T Consensus       220 p~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~vdgg~~~~  259 (260)
T PRK06523        220 PLGRPAEPEEVAELIAFLASDRAASITGTEYVIDGGTVPT  259 (260)
T ss_pred             ccCCCCCHHHHHHHHHHHhCcccccccCceEEecCCccCC
Confidence            2234578999999999999754 33467888888876543

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.85  E-value=4.3e-20  Score=169.23  Aligned_cols=215  Identities=16%  Similarity=0.132  Sum_probs=145.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-CchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVR-SVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      ++++++||||+|+||++++++|+++|++|+++.+ +.....+..+.++..             ..++..+.+|++|.+++
T Consensus         2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~~   68 (246)
T PRK12938          2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKAL-------------GFDFIASEGNVGDWDST   68 (246)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhc-------------CCcEEEEEcCCCCHHHH
Confidence            4679999999999999999999999999988654 443333333322221             14577889999999887


Q ss_pred             HHHh-------cCCCEEEEccccCccc------cCCCCCcchhhHHHHHHHHHH----HHHcCCCEEEEEccCCCCCCCC
Q 016901          158 EPAL-------GNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDA----ATIAKVNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       158 ~~a~-------~~~d~Vi~~Ag~~~~~------~~~~~~~~~~nv~g~~~ll~a----~~~~~v~r~V~~SS~~~~~~~~  220 (380)
                      .+++       +++|+||||||.....      ..+++..+++|+.++.+++++    +++.+.++||++||....... 
T Consensus        69 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-  147 (246)
T PRK12938         69 KAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQ-  147 (246)
T ss_pred             HHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCC-
Confidence            7765       4689999999865321      112344578899997665554    455667899999997543211 


Q ss_pred             chhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHH
Q 016901          221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA  293 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~  293 (380)
                           .....|+.+|.+.+.+++       ..|+++++|+||++.+|........................++|++++++
T Consensus       148 -----~~~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  222 (246)
T PRK12938        148 -----FGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATIPVRRLGSPDEIGSIVA  222 (246)
T ss_pred             -----CCChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhcChHHHHHHHhcCCccCCcCHHHHHHHHH
Confidence                 234569999998877654       26899999999999887431100000000001111223578999999999


Q ss_pred             HHHhCC-CCccCcEEEEecC
Q 016901          294 CMAKNR-SLSYCKVVEVIAE  312 (380)
Q Consensus       294 ~~l~~~-~~~~~~~~ni~~~  312 (380)
                      .++.+. ....++.+.+.++
T Consensus       223 ~l~~~~~~~~~g~~~~~~~g  242 (246)
T PRK12938        223 WLASEESGFSTGADFSLNGG  242 (246)
T ss_pred             HHcCcccCCccCcEEEECCc
Confidence            998764 3346777877665

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1.1e-19  Score=167.71  Aligned_cols=219  Identities=14%  Similarity=0.099  Sum_probs=150.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCch-hHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ-RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~  155 (380)
                      .+.+++++||||+|+||++++++|+++|++|++++|+.+ ..+...+.+...+             .++.++++|++|.+
T Consensus         5 ~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~-------------~~~~~~~~D~~~~~   71 (254)
T PRK06114          5 DLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAG-------------RRAIQIAADVTSKA   71 (254)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcC-------------CceEEEEcCCCCHH
Confidence            346789999999999999999999999999999999764 3344444333211             46788999999998


Q ss_pred             cHHHHh-------cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCC
Q 016901          156 QIEPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKF  218 (380)
Q Consensus       156 ~~~~a~-------~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~  218 (380)
                      ++.+++       +.+|+||||||......      .++...+++|+.++..+++++    ++.+.++||++||......
T Consensus        72 ~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~  151 (254)
T PRK06114         72 DLRAAVARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIV  151 (254)
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCC
Confidence            887765       35799999999653221      223445789999987776654    4455679999999754321


Q ss_pred             CCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccc-eeeccCCcccCCCCCHHHHHH
Q 016901          219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHN-ITLSQEDTLFGGQVSNLQVAE  290 (380)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~-~~~~~~~~~~~~~i~~~DvA~  290 (380)
                      . +.   .....|+.+|++.+.+++       ..|+++++|+||++.++......... ..........+....++|+|.
T Consensus       152 ~-~~---~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~  227 (254)
T PRK06114        152 N-RG---LLQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRPEMVHQTKLFEEQTPMQRMAKVDEMVG  227 (254)
T ss_pred             C-CC---CCcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccccchHHHHHHHhcCCCCCCcCHHHHHH
Confidence            1 10   113469999999887765       36899999999999887432110000 000011112345678999999


Q ss_pred             HHHHHHhCC-CCccCcEEEEecC
Q 016901          291 LLACMAKNR-SLSYCKVVEVIAE  312 (380)
Q Consensus       291 ~i~~~l~~~-~~~~~~~~ni~~~  312 (380)
                      +++.++.+. ....|+++.+-++
T Consensus       228 ~~~~l~s~~~~~~tG~~i~~dgg  250 (254)
T PRK06114        228 PAVFLLSDAASFCTGVDLLVDGG  250 (254)
T ss_pred             HHHHHcCccccCcCCceEEECcC
Confidence            999998753 3346777777665

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.85  E-value=7.7e-20  Score=168.45  Aligned_cols=214  Identities=13%  Similarity=0.057  Sum_probs=151.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      ..++++|||||+|+||.+++++|+++|++|+++.|+....... ..+.               ..++.++.+|++|.+++
T Consensus        13 ~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~-~~~~---------------~~~~~~~~~Dl~~~~~~   76 (255)
T PRK06841         13 LSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVA-AQLL---------------GGNAKGLVCDVSDSQSV   76 (255)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHhh---------------CCceEEEEecCCCHHHH
Confidence            3678999999999999999999999999999999987543221 1111               14577899999999888


Q ss_pred             HHHhc-------CCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHHHH----cCCCEEEEEccCCCCCCCC
Q 016901          158 EPALG-------NASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~~~----~~v~r~V~~SS~~~~~~~~  220 (380)
                      .+++.       ++|+||||||.......      ++...+++|+.|+.++++++..    .+.++||++||.+.... .
T Consensus        77 ~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-~  155 (255)
T PRK06841         77 EAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVA-L  155 (255)
T ss_pred             HHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccC-C
Confidence            77663       68999999996532211      2233578999999999988753    45679999999754221 1


Q ss_pred             chhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccccccc-ceeeccCCcccCCCCCHHHHHHHH
Q 016901          221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH-NITLSQEDTLFGGQVSNLQVAELL  292 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~-~~~~~~~~~~~~~~i~~~DvA~~i  292 (380)
                           .....|+.+|.+.+.+.+       ..|++++.|+||.+.++........ ...........+.+.+++|+|+++
T Consensus       156 -----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~  230 (255)
T PRK06841        156 -----ERHVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAGEKGERAKKLIPAGRFAYPEEIAAAA  230 (255)
T ss_pred             -----CCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccchhHHHHHHhcCCCCCCcCHHHHHHHH
Confidence                 223469999999887765       2689999999999987742210000 000001111234578999999999


Q ss_pred             HHHHhCCC-CccCcEEEEecCC
Q 016901          293 ACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       293 ~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      +.++..+. ...|+++.+.++.
T Consensus       231 ~~l~~~~~~~~~G~~i~~dgg~  252 (255)
T PRK06841        231 LFLASDAAAMITGENLVIDGGY  252 (255)
T ss_pred             HHHcCccccCccCCEEEECCCc
Confidence            99997643 3467888877664

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.85  E-value=1.1e-19  Score=166.76  Aligned_cols=214  Identities=15%  Similarity=0.106  Sum_probs=148.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++++|+||||+|+||++++++|+++|++|++++|+..  ....+.+..+             ..++.++.+|++|.+++
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~--~~~~~~~~~~-------------~~~~~~~~~D~~~~~~~   67 (248)
T TIGR01832         3 LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP--SETQQQVEAL-------------GRRFLSLTADLSDIEAI   67 (248)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH--HHHHHHHHhc-------------CCceEEEECCCCCHHHH
Confidence            36789999999999999999999999999999999752  2232322221             14688999999999888


Q ss_pred             HHHh-------cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHHH----cC-CCEEEEEccCCCCCCC
Q 016901          158 EPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATI----AK-VNHFIMVSSLGTNKFG  219 (380)
Q Consensus       158 ~~a~-------~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~~----~~-v~r~V~~SS~~~~~~~  219 (380)
                      .+++       +++|+||||||......      .++...+++|+.++.++++++..    .+ .+++|++||.......
T Consensus        68 ~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~  147 (248)
T TIGR01832        68 KALVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGG  147 (248)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCC
Confidence            7655       46899999998653211      12334478999999998888753    33 4689999997653221


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCccccccccee--eccCCcccCCCCCHHHHHH
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNIT--LSQEDTLFGGQVSNLQVAE  290 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~~~~~~--~~~~~~~~~~~i~~~DvA~  290 (380)
                            .....|+.+|.+.+.+++.       +|+++++|+||++.++...........  ........+.+++++|+|+
T Consensus       148 ------~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  221 (248)
T TIGR01832       148 ------IRVPSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRNAAILERIPAGRWGTPDDIGG  221 (248)
T ss_pred             ------CCCchhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHHHHHHHhcCCCCCCcCHHHHHH
Confidence                  1223699999999987752       589999999999987742111000000  0001112346899999999


Q ss_pred             HHHHHHhCCC-CccCcEEEEecC
Q 016901          291 LLACMAKNRS-LSYCKVVEVIAE  312 (380)
Q Consensus       291 ~i~~~l~~~~-~~~~~~~ni~~~  312 (380)
                      ++..++.... ...|.++.+.++
T Consensus       222 ~~~~l~s~~~~~~~G~~i~~dgg  244 (248)
T TIGR01832       222 PAVFLASSASDYVNGYTLAVDGG  244 (248)
T ss_pred             HHHHHcCccccCcCCcEEEeCCC
Confidence            9999997543 234666665544

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.85  E-value=5.1e-20  Score=173.28  Aligned_cols=218  Identities=12%  Similarity=0.087  Sum_probs=152.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchh-HHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR-AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~  155 (380)
                      .+++|++|||||+|+||.+++++|+++|++|+++.|+... .+.....++..             ..++.++.+|++|.+
T Consensus        43 ~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~~Dl~~~~  109 (290)
T PRK06701         43 KLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKE-------------GVKCLLIPGDVSDEA  109 (290)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc-------------CCeEEEEEccCCCHH
Confidence            3467899999999999999999999999999999997643 33333322211             146889999999998


Q ss_pred             cHHHHh-------cCCCEEEEccccCcc--cc-----CCCCCcchhhHHHHHHHHHHHHHc--CCCEEEEEccCCCCCCC
Q 016901          156 QIEPAL-------GNASVVICCIGASEK--EV-----FDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       156 ~~~~a~-------~~~d~Vi~~Ag~~~~--~~-----~~~~~~~~~nv~g~~~ll~a~~~~--~v~r~V~~SS~~~~~~~  219 (380)
                      ++.+++       ..+|+||||||....  ..     .++...+++|+.++.++++++...  ..++||++||.+.....
T Consensus       110 ~~~~~~~~i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~  189 (290)
T PRK06701        110 FCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGN  189 (290)
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCC
Confidence            887766       368999999986422  11     122345789999999999988652  23589999997764321


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccc-cceeeccCCcccCCCCCHHHHHHH
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-HNITLSQEDTLFGGQVSNLQVAEL  291 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~-~~~~~~~~~~~~~~~i~~~DvA~~  291 (380)
                            .....|+.+|.+.+.+++       ..|++++.|+||.++++....... ............+.+.+++|+|++
T Consensus       190 ------~~~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  263 (290)
T PRK06701        190 ------ETLIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFDEEKVSQFGSNTPMQRPGQPEELAPA  263 (290)
T ss_pred             ------CCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccccCHHHHHHHHhcCCcCCCcCHHHHHHH
Confidence                  122469999999987765       258999999999998874211000 000000111123457899999999


Q ss_pred             HHHHHhCCC-CccCcEEEEecCC
Q 016901          292 LACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       292 i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      ++.++.... ...+.+|++.++.
T Consensus       264 ~~~ll~~~~~~~~G~~i~idgg~  286 (290)
T PRK06701        264 YVFLASPDSSYITGQMLHVNGGV  286 (290)
T ss_pred             HHHHcCcccCCccCcEEEeCCCc
Confidence            999998743 2457888887764

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.85  E-value=3e-20  Score=170.80  Aligned_cols=213  Identities=14%  Similarity=0.107  Sum_probs=147.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-CchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVR-SVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      ++++++||||+|+||+++++.|+++|++|+++.+ +..+.+.+...+                ..++.++.+|++|++++
T Consensus         4 ~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~----------------~~~~~~~~~D~~~~~~~   67 (253)
T PRK08642          4 SEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL----------------GDRAIALQADVTDREQV   67 (253)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh----------------CCceEEEEcCCCCHHHH
Confidence            5679999999999999999999999999988765 444433332211                14688899999999888


Q ss_pred             HHHhc-------C-CCEEEEccccCcc-------cc-----CCCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccC
Q 016901          158 EPALG-------N-ASVVICCIGASEK-------EV-----FDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSL  213 (380)
Q Consensus       158 ~~a~~-------~-~d~Vi~~Ag~~~~-------~~-----~~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~  213 (380)
                      .++++       . +|+||||||....       ..     .++...+++|+.++.++++++.    +.+.+++|++||.
T Consensus        68 ~~~~~~~~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~  147 (253)
T PRK08642         68 QAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTN  147 (253)
T ss_pred             HHHHHHHHHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCc
Confidence            77763       3 8999999985310       00     1122347889999999998875    3455799999986


Q ss_pred             CCCCCCCchhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCccccc-ccceeeccCCcccCCCCCH
Q 016901          214 GTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE-THNITLSQEDTLFGGQVSN  285 (380)
Q Consensus       214 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~-~~~~~~~~~~~~~~~~i~~  285 (380)
                      .....      ..+...|+.+|.+.|.+++.       .|++++.|+||++..+...... .............+.+.++
T Consensus       148 ~~~~~------~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (253)
T PRK08642        148 LFQNP------VVPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATPDEVFDLIAATTPLRKVTTP  221 (253)
T ss_pred             cccCC------CCCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCCHHHHHHHHhcCCcCCCCCH
Confidence            54221      12345799999999988763       6899999999999776321100 0000000111123457899


Q ss_pred             HHHHHHHHHHHhCC-CCccCcEEEEecCC
Q 016901          286 LQVAELLACMAKNR-SLSYCKVVEVIAET  313 (380)
Q Consensus       286 ~DvA~~i~~~l~~~-~~~~~~~~ni~~~~  313 (380)
                      +|+|+++..++... ....|..+.+.++.
T Consensus       222 ~~va~~~~~l~~~~~~~~~G~~~~vdgg~  250 (253)
T PRK08642        222 QEFADAVLFFASPWARAVTGQNLVVDGGL  250 (253)
T ss_pred             HHHHHHHHHHcCchhcCccCCEEEeCCCe
Confidence            99999999999753 33567788777653

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.85  E-value=7.6e-20  Score=170.19  Aligned_cols=201  Identities=12%  Similarity=0.090  Sum_probs=143.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      |+|+||||+|+||++++++|+++|++|++++|+.++.+.....+...+             .++.++.+|++|.+++.++
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~-------------~~~~~~~~D~~~~~~~~~~   67 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAG-------------GDGFYQRCDVRDYSQLTAL   67 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------------CceEEEEccCCCHHHHHHH
Confidence            479999999999999999999999999999999887776665544321             5688899999999888776


Q ss_pred             hc-------CCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHH----HHHcCCCEEEEEccCCCCCCCCchh
Q 016901          161 LG-------NASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDA----ATIAKVNHFIMVSSLGTNKFGFPAA  223 (380)
Q Consensus       161 ~~-------~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a----~~~~~v~r~V~~SS~~~~~~~~~~~  223 (380)
                      +.       ++|+||||||.......      ++...+++|+.++.+++++    +++.+.++||++||......     
T Consensus        68 ~~~i~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~-----  142 (270)
T PRK05650         68 AQACEEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQ-----  142 (270)
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCC-----
Confidence            63       69999999996533221      2223467898887776655    45667789999999765322     


Q ss_pred             hhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeec--cCCcccCCCCCHHHHHHHHHH
Q 016901          224 ILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLS--QEDTLFGGQVSNLQVAELLAC  294 (380)
Q Consensus       224 ~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~--~~~~~~~~~i~~~DvA~~i~~  294 (380)
                       ......|+.+|.+.+.+.+       ..|+++++|+||.+.++.............  ........+++++|+|+.++.
T Consensus       143 -~~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~  221 (270)
T PRK05650        143 -GPAMSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGKLLEKSPITAADIADYIYQ  221 (270)
T ss_pred             -CCCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHHHHHhhcCCCCHHHHHHHHHH
Confidence             1234579999998776543       268999999999998774321100000000  000111246899999999999


Q ss_pred             HHhCCC
Q 016901          295 MAKNRS  300 (380)
Q Consensus       295 ~l~~~~  300 (380)
                      ++.+..
T Consensus       222 ~l~~~~  227 (270)
T PRK05650        222 QVAKGE  227 (270)
T ss_pred             HHhCCC
Confidence            998643

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.85  E-value=3.1e-20  Score=169.99  Aligned_cols=214  Identities=14%  Similarity=0.144  Sum_probs=144.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEE-eCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAG-VRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l-~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      ++++||||+|+||++++++|+++|++|+++ .|+.++..+....+...+             .++.++++|++|.+++++
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~D~~d~~~i~~   68 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAG-------------GKAFVLQADISDENQVVA   68 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCC-------------CeEEEEEccCCCHHHHHH
Confidence            589999999999999999999999999874 577666555554443221             468889999999988887


Q ss_pred             Hhc-------CCCEEEEccccCccc--cC-----CCCCcchhhHHHHHHHHHHHHHc-------CCCEEEEEccCCCCCC
Q 016901          160 ALG-------NASVVICCIGASEKE--VF-----DITGPYRIDFQATKNLVDAATIA-------KVNHFIMVSSLGTNKF  218 (380)
Q Consensus       160 a~~-------~~d~Vi~~Ag~~~~~--~~-----~~~~~~~~nv~g~~~ll~a~~~~-------~v~r~V~~SS~~~~~~  218 (380)
                      +++       .+|+||||||.....  ..     ++...+++|+.++.++++++...       ..++||++||......
T Consensus        69 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~  148 (247)
T PRK09730         69 MFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLG  148 (247)
T ss_pred             HHHHHHHhCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccC
Confidence            764       579999999864211  11     12245788999998877765432       1357999999755322


Q ss_pred             CCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccce-eeccCCcccCCCCCHHHHHH
Q 016901          219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNI-TLSQEDTLFGGQVSNLQVAE  290 (380)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~-~~~~~~~~~~~~i~~~DvA~  290 (380)
                      . +    .....|+.+|...+.+++       ..|++++++|||++++|.......... .............+++|+|+
T Consensus       149 ~-~----~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  223 (247)
T PRK09730        149 A-P----GEYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQRGGQPEEVAQ  223 (247)
T ss_pred             C-C----CcccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCCHHHHHHHHhcCCCCCCcCHHHHHH
Confidence            1 1    112359999999987765       258999999999999985321110000 00000111122358999999


Q ss_pred             HHHHHHhCCC-CccCcEEEEecC
Q 016901          291 LLACMAKNRS-LSYCKVVEVIAE  312 (380)
Q Consensus       291 ~i~~~l~~~~-~~~~~~~ni~~~  312 (380)
                      +++.++.+.. ...+.+|++.++
T Consensus       224 ~~~~~~~~~~~~~~g~~~~~~g~  246 (247)
T PRK09730        224 AIVWLLSDKASYVTGSFIDLAGG  246 (247)
T ss_pred             HHHhhcChhhcCccCcEEecCCC
Confidence            9999887642 245677777664

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1.4e-19  Score=165.60  Aligned_cols=215  Identities=15%  Similarity=0.130  Sum_probs=149.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCch-hHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ-RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      ++++++||||+|+||+++++.|+++|++|+++.|+.. ....+.+.+...+             .++.++.+|++|.+++
T Consensus         4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~Dl~~~~~~   70 (245)
T PRK12937          4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAG-------------GRAIAVQADVADAAAV   70 (245)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcC-------------CeEEEEECCCCCHHHH
Confidence            5689999999999999999999999999988877543 3334433333221             5688999999999888


Q ss_pred             HHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHHHc--CCCEEEEEccCCCCCCCCch
Q 016901          158 EPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFPA  222 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~~~--~v~r~V~~SS~~~~~~~~~~  222 (380)
                      .++++       ++|+||||||......      .++...+++|+.++.++++++.+.  ..++||++||.+....    
T Consensus        71 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~----  146 (245)
T PRK12937         71 TRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALP----  146 (245)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCC----
Confidence            87764       6899999999643211      122334779999999999888653  2358999998765322    


Q ss_pred             hhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcccccccce-eeccCCcccCCCCCHHHHHHHHHH
Q 016901          223 AILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNI-TLSQEDTLFGGQVSNLQVAELLAC  294 (380)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~~~~~-~~~~~~~~~~~~i~~~DvA~~i~~  294 (380)
                        ......|+.+|.+.+.+++.       .|+++++++||++.++.......... .........+.+.+++|+|+++..
T Consensus       147 --~~~~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~  224 (245)
T PRK12937        147 --LPGYGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGKSAEQIDQLAGLAPLERLGTPEEIAAAVAF  224 (245)
T ss_pred             --CCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence              12335699999999987752       58999999999987763110000000 000011123346789999999999


Q ss_pred             HHhCCC-CccCcEEEEecC
Q 016901          295 MAKNRS-LSYCKVVEVIAE  312 (380)
Q Consensus       295 ~l~~~~-~~~~~~~ni~~~  312 (380)
                      ++.++. ...+.++++.++
T Consensus       225 l~~~~~~~~~g~~~~~~~g  243 (245)
T PRK12937        225 LAGPDGAWVNGQVLRVNGG  243 (245)
T ss_pred             HcCccccCccccEEEeCCC
Confidence            987643 245788887654

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.85  E-value=5.9e-20  Score=169.09  Aligned_cols=217  Identities=11%  Similarity=0.082  Sum_probs=153.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +.+++++||||+|+||++++++|+++|++|+++.|+.++.+...+.+...+             .++.++.+|++|.+++
T Consensus         5 l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~D~~~~~~i   71 (253)
T PRK06172          5 FSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAG-------------GEALFVACDVTRDAEV   71 (253)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC-------------CceEEEEcCCCCHHHH
Confidence            356899999999999999999999999999999999887666555444321             5688999999999888


Q ss_pred             HHHhc-------CCCEEEEccccCccc-------cCCCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCCC
Q 016901          158 EPALG-------NASVVICCIGASEKE-------VFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~~~-------~~~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~~  219 (380)
                      .++++       .+|+||||||.....       ..++...+++|+.++.++++++    .+.+.+++|++||.......
T Consensus        72 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~  151 (253)
T PRK06172         72 KALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAA  151 (253)
T ss_pred             HHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCC
Confidence            77653       579999999864221       1123344779999987776654    34556789999997653221


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcccccc--cce-eeccCCcccCCCCCHHHHH
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET--HNI-TLSQEDTLFGGQVSNLQVA  289 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~~--~~~-~~~~~~~~~~~~i~~~DvA  289 (380)
                            .....|+.+|.+.+.+++.       .|+++++|+||.+.++.......  ... .........+....++|++
T Consensus       152 ------~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ia  225 (253)
T PRK06172        152 ------PKMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPVGRIGKVEEVA  225 (253)
T ss_pred             ------CCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHHhccCCCCCccCHHHHH
Confidence                  2345699999999877652       58999999999997764221100  000 0000111123457899999


Q ss_pred             HHHHHHHhCC-CCccCcEEEEecCC
Q 016901          290 ELLACMAKNR-SLSYCKVVEVIAET  313 (380)
Q Consensus       290 ~~i~~~l~~~-~~~~~~~~ni~~~~  313 (380)
                      +.++.++.+. ....|+.+++.++.
T Consensus       226 ~~~~~l~~~~~~~~~G~~i~~dgg~  250 (253)
T PRK06172        226 SAVLYLCSDGASFTTGHALMVDGGA  250 (253)
T ss_pred             HHHHHHhCccccCcCCcEEEECCCc
Confidence            9999999764 33568888887764

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.85  E-value=5.9e-20  Score=168.65  Aligned_cols=215  Identities=13%  Similarity=0.108  Sum_probs=150.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +.+++++||||+|+||..+++.|+++|++|++++|++++.....+.+...+             .++.++++|++|.+++
T Consensus         3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~D~~~~~~~   69 (253)
T PRK08217          3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALG-------------TEVRGYAANVTDEEDV   69 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------------CceEEEEcCCCCHHHH
Confidence            356899999999999999999999999999999999877666555443321             5688899999998877


Q ss_pred             HHHh-------cCCCEEEEccccCcccc---------------CCCCCcchhhHHHHHHHHHHHH----Hc-CCCEEEEE
Q 016901          158 EPAL-------GNASVVICCIGASEKEV---------------FDITGPYRIDFQATKNLVDAAT----IA-KVNHFIMV  210 (380)
Q Consensus       158 ~~a~-------~~~d~Vi~~Ag~~~~~~---------------~~~~~~~~~nv~g~~~ll~a~~----~~-~v~r~V~~  210 (380)
                      ++++       +.+|+||||||......               .++...+++|+.++.++++++.    +. .-.++|++
T Consensus        70 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~  149 (253)
T PRK08217         70 EATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINI  149 (253)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEE
Confidence            6655       34799999998543211               0112236789999887765443    32 23479999


Q ss_pred             ccCCCCCCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCC
Q 016901          211 SSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQV  283 (380)
Q Consensus       211 SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i  283 (380)
                      ||.+..  +.     .....|+.+|.+.+.+++       ..|++++.++||++.++.......................
T Consensus       150 ss~~~~--~~-----~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  222 (253)
T PRK08217        150 SSIARA--GN-----MGQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMKPEALERLEKMIPVGRLG  222 (253)
T ss_pred             cccccc--CC-----CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCHHHHHHHHhcCCcCCCc
Confidence            987642  21     233569999999987765       3689999999999988743211000000000111223457


Q ss_pred             CHHHHHHHHHHHHhCCCCccCcEEEEecCC
Q 016901          284 SNLQVAELLACMAKNRSLSYCKVVEVIAET  313 (380)
Q Consensus       284 ~~~DvA~~i~~~l~~~~~~~~~~~ni~~~~  313 (380)
                      +++|+|+++..++.... ..+++|++.++.
T Consensus       223 ~~~~~a~~~~~l~~~~~-~~g~~~~~~gg~  251 (253)
T PRK08217        223 EPEEIAHTVRFIIENDY-VTGRVLEIDGGL  251 (253)
T ss_pred             CHHHHHHHHHHHHcCCC-cCCcEEEeCCCc
Confidence            89999999999997643 578899988874

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.85  E-value=9e-20  Score=168.39  Aligned_cols=216  Identities=16%  Similarity=0.186  Sum_probs=145.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCch----hHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCC
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ----RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK  153 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d  153 (380)
                      +++++++||||+|+||.++++.|+++|++|+++.++..    ..+...+.++..             ..++.++++|++|
T Consensus         6 l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~-------------~~~~~~~~~D~~~   72 (257)
T PRK12744          6 LKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAA-------------GAKAVAFQADLTT   72 (257)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHh-------------CCcEEEEecCcCC
Confidence            35689999999999999999999999999887776432    233332222221             1468899999999


Q ss_pred             hhcHHHHh-------cCCCEEEEccccCccc------cCCCCCcchhhHHHHHHHHHHHHHcC--CCEEEEE-ccCCCCC
Q 016901          154 RVQIEPAL-------GNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATIAK--VNHFIMV-SSLGTNK  217 (380)
Q Consensus       154 ~~~~~~a~-------~~~d~Vi~~Ag~~~~~------~~~~~~~~~~nv~g~~~ll~a~~~~~--v~r~V~~-SS~~~~~  217 (380)
                      .+++++++       +++|+||||||.....      ..++...+++|+.++..+++++...-  .++++++ ||.... 
T Consensus        73 ~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~-  151 (257)
T PRK12744         73 AAAVEKLFDDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGA-  151 (257)
T ss_pred             HHHHHHHHHHHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcc-
Confidence            98888766       3689999999964221      11234457899999999998886431  2456665 443221 


Q ss_pred             CCCchhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcccc-cccceee---ccCCccc--CCCCC
Q 016901          218 FGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-ETHNITL---SQEDTLF--GGQVS  284 (380)
Q Consensus       218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~-~~~~~~~---~~~~~~~--~~~i~  284 (380)
                      +.      .....|+.+|.+.|.+++.       .|+++++++||.+.++..... .......   .......  .++.+
T Consensus       152 ~~------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (257)
T PRK12744        152 FT------PFYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVAYHKTAAALSPFSKTGLTD  225 (257)
T ss_pred             cC------CCcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccchhhcccccccccccccCCCCC
Confidence            11      2235699999999988763       479999999999987632110 0000000   0001111  25789


Q ss_pred             HHHHHHHHHHHHhCCCCccCcEEEEecCC
Q 016901          285 NLQVAELLACMAKNRSLSYCKVVEVIAET  313 (380)
Q Consensus       285 ~~DvA~~i~~~l~~~~~~~~~~~ni~~~~  313 (380)
                      ++|+|.++..++.......|+++++.++.
T Consensus       226 ~~dva~~~~~l~~~~~~~~g~~~~~~gg~  254 (257)
T PRK12744        226 IEDIVPFIRFLVTDGWWITGQTILINGGY  254 (257)
T ss_pred             HHHHHHHHHHhhcccceeecceEeecCCc
Confidence            99999999999986433457888888764

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.85  E-value=8.7e-20  Score=169.32  Aligned_cols=217  Identities=12%  Similarity=0.080  Sum_probs=154.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +.+++++||||+|+||++++++|+++|++|+++.|+.++.++....+...+             .++.++++|++|.+++
T Consensus         8 ~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~Dl~~~~~~   74 (265)
T PRK07097          8 LKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELG-------------IEAHGYVCDVTDEDGV   74 (265)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcC-------------CceEEEEcCCCCHHHH
Confidence            366899999999999999999999999999999999887766655444321             4688999999999888


Q ss_pred             HHHh-------cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCCCC
Q 016901          158 EPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       158 ~~a~-------~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~~~  220 (380)
                      ++++       +.+|+||||||......      .++...+++|+.|+..+++++.    +.+.++||++||......  
T Consensus        75 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~--  152 (265)
T PRK07097         75 QAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELG--  152 (265)
T ss_pred             HHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCC--
Confidence            8776       35899999999653221      1233346789999887776653    455679999999754221  


Q ss_pred             chhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccc-----cceeec---cCCcccCCCCCH
Q 016901          221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-----HNITLS---QEDTLFGGQVSN  285 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~-----~~~~~~---~~~~~~~~~i~~  285 (380)
                          ......|+.+|.+.+.+++       ..|++++.|+||.+.++.......     ......   ......+.+..+
T Consensus       153 ----~~~~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (265)
T PRK07097        153 ----RETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPAARWGDP  228 (265)
T ss_pred             ----CCCCccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCCccCCcCH
Confidence                1234569999999987765       268999999999998874211000     000000   001112346789


Q ss_pred             HHHHHHHHHHHhCC-CCccCcEEEEecCC
Q 016901          286 LQVAELLACMAKNR-SLSYCKVVEVIAET  313 (380)
Q Consensus       286 ~DvA~~i~~~l~~~-~~~~~~~~ni~~~~  313 (380)
                      +|+|..+..++... ....++++.+.++.
T Consensus       229 ~dva~~~~~l~~~~~~~~~g~~~~~~gg~  257 (265)
T PRK07097        229 EDLAGPAVFLASDASNFVNGHILYVDGGI  257 (265)
T ss_pred             HHHHHHHHHHhCcccCCCCCCEEEECCCc
Confidence            99999999999863 33457777777664

>PRK06398 aldose dehydrogenase; Validated

Probab=99.85  E-value=1.6e-19  Score=167.03  Aligned_cols=207  Identities=13%  Similarity=0.097  Sum_probs=147.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .++++++|||||+|+||++++++|+++|++|++++|+....                        .++.++++|++|+++
T Consensus         3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~------------------------~~~~~~~~D~~~~~~   58 (258)
T PRK06398          3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY------------------------NDVDYFKVDVSNKEQ   58 (258)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc------------------------CceEEEEccCCCHHH
Confidence            34678999999999999999999999999999999986421                        358889999999988


Q ss_pred             HHHHh-------cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCCC
Q 016901          157 IEPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       157 ~~~a~-------~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~~  219 (380)
                      +++++       +++|+||||||......      .++...+++|+.|+.++++++.    +.+.++||++||...... 
T Consensus        59 i~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-  137 (258)
T PRK06398         59 VIKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAV-  137 (258)
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccC-
Confidence            87766       36899999999643221      1233447899999988887764    345679999999765322 


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHHH------CCCCEEEEecCcccCCCccccc-----c--cce----eeccCCcccCCC
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKE-----T--HNI----TLSQEDTLFGGQ  282 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~------~g~~~~ivRpg~v~gp~~~~~~-----~--~~~----~~~~~~~~~~~~  282 (380)
                           ......|+.+|.+.+.+.+.      .+++++.|+||++.++......     .  ...    .........+..
T Consensus       138 -----~~~~~~Y~~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (258)
T PRK06398        138 -----TRNAAAYVTSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRV  212 (258)
T ss_pred             -----CCCCchhhhhHHHHHHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhcCCcCCC
Confidence                 12345799999999988763      3499999999999776321000     0  000    000011122345


Q ss_pred             CCHHHHHHHHHHHHhCCC-CccCcEEEEecCC
Q 016901          283 VSNLQVAELLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       283 i~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      ..++|+|++++.++.... ...|.++.+.++.
T Consensus       213 ~~p~eva~~~~~l~s~~~~~~~G~~i~~dgg~  244 (258)
T PRK06398        213 GKPEEVAYVVAFLASDLASFITGECVTVDGGL  244 (258)
T ss_pred             cCHHHHHHHHHHHcCcccCCCCCcEEEECCcc
Confidence            789999999999987543 3457777777664

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.85  E-value=1.9e-19  Score=164.57  Aligned_cols=216  Identities=16%  Similarity=0.119  Sum_probs=147.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      +++++||||+|+||+++++.|+++|++|+++.|+...  ...+....+.          ....++.++.+|++|.+++.+
T Consensus         2 ~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~--~~~~~~~~~~----------~~~~~~~~~~~D~~~~~~v~~   69 (245)
T PRK12824          2 KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGND--CAKDWFEEYG----------FTEDQVRLKELDVTDTEECAE   69 (245)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHH--HHHHHHHHhh----------ccCCeEEEEEcCCCCHHHHHH
Confidence            3589999999999999999999999999999998541  1111111110          011468899999999988877


Q ss_pred             Hhc-------CCCEEEEccccCccc------cCCCCCcchhhHHHHHHHHH----HHHHcCCCEEEEEccCCCCCCCCch
Q 016901          160 ALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVD----AATIAKVNHFIMVSSLGTNKFGFPA  222 (380)
Q Consensus       160 a~~-------~~d~Vi~~Ag~~~~~------~~~~~~~~~~nv~g~~~ll~----a~~~~~v~r~V~~SS~~~~~~~~~~  222 (380)
                      +++       .+|+||||+|.....      ..++...+++|+.++.++++    .+++.+.++||++||.......   
T Consensus        70 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~---  146 (245)
T PRK12824         70 ALAEIEEEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQ---  146 (245)
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCC---
Confidence            663       589999999865321      11233446789999888755    4455667899999997653211   


Q ss_pred             hhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHHH
Q 016901          223 AILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACM  295 (380)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~  295 (380)
                         .....|..+|.+.+.+++       ..|+++++++||++.++...................+.+..++|+++++..+
T Consensus       147 ---~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  223 (245)
T PRK12824        147 ---FGQTNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQMGPEVLQSIVNQIPMKRLGTPEEIAAAVAFL  223 (245)
T ss_pred             ---CCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcCHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence               123469999998876654       3689999999999988743211110000001111233467899999999988


Q ss_pred             HhCC-CCccCcEEEEecCC
Q 016901          296 AKNR-SLSYCKVVEVIAET  313 (380)
Q Consensus       296 l~~~-~~~~~~~~ni~~~~  313 (380)
                      +... ....|+.+++.++.
T Consensus       224 ~~~~~~~~~G~~~~~~~g~  242 (245)
T PRK12824        224 VSEAAGFITGETISINGGL  242 (245)
T ss_pred             cCccccCccCcEEEECCCe
Confidence            8653 33468899988875

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.84  E-value=1e-19  Score=167.86  Aligned_cols=215  Identities=15%  Similarity=0.158  Sum_probs=151.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +.+++|+||||+|+||+++++.|+++|++|+++.|+.++.+.+...+...             ..++.++.+|+++.+++
T Consensus         7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~-------------~~~~~~~~~D~~~~~~~   73 (258)
T PRK06949          7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAE-------------GGAAHVVSLDVTDYQSI   73 (258)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-------------CCcEEEEEecCCCHHHH
Confidence            46789999999999999999999999999999999988776665544321             14688999999999888


Q ss_pred             HHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHHH----cC--------CCEEEEEcc
Q 016901          158 EPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATI----AK--------VNHFIMVSS  212 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~~----~~--------v~r~V~~SS  212 (380)
                      .++++       .+|+||||||......      .++...+++|+.++.++++++..    ..        .+++|++||
T Consensus        74 ~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS  153 (258)
T PRK06949         74 KAAVAHAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIAS  153 (258)
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECc
Confidence            87764       6899999998643211      12334478899999888877642    21        258999999


Q ss_pred             CCCCCCCCchhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCccc--ccccceeeccCCcccCCCC
Q 016901          213 LGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAY--KETHNITLSQEDTLFGGQV  283 (380)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~--~~~~~~~~~~~~~~~~~~i  283 (380)
                      ......      ......|+.+|.+.+.+++.       .|+++++|+||++++|....  .......+. .....+.+.
T Consensus       154 ~~~~~~------~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~-~~~~~~~~~  226 (258)
T PRK06949        154 VAGLRV------LPQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWETEQGQKLV-SMLPRKRVG  226 (258)
T ss_pred             ccccCC------CCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccChHHHHHHH-hcCCCCCCc
Confidence            765322      12335699999998877652       68999999999999885321  100000011 111123457


Q ss_pred             CHHHHHHHHHHHHhCCC-CccCcEEEEecC
Q 016901          284 SNLQVAELLACMAKNRS-LSYCKVVEVIAE  312 (380)
Q Consensus       284 ~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~  312 (380)
                      .++|+++++..++.... ...|..+.+.++
T Consensus       227 ~p~~~~~~~~~l~~~~~~~~~G~~i~~dgg  256 (258)
T PRK06949        227 KPEDLDGLLLLLAADESQFINGAIISADDG  256 (258)
T ss_pred             CHHHHHHHHHHHhChhhcCCCCcEEEeCCC
Confidence            78999999999987532 345666655543

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.84  E-value=1.2e-19  Score=167.05  Aligned_cols=211  Identities=14%  Similarity=0.076  Sum_probs=150.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++++++||||+|+||++++++|+++|++|++++|+.++.  .               .    ..++.++++|++|.+++
T Consensus         4 ~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~~--~---------------~----~~~~~~~~~D~~~~~~~   62 (252)
T PRK07856          4 LTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPET--V---------------D----GRPAEFHAADVRDPDQV   62 (252)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhhh--h---------------c----CCceEEEEccCCCHHHH
Confidence            4678999999999999999999999999999999987541  0               0    14688999999999888


Q ss_pred             HHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHHH-----cCCCEEEEEccCCCCCCC
Q 016901          158 EPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATI-----AKVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~~-----~~v~r~V~~SS~~~~~~~  219 (380)
                      .+++.       .+|+||||||......      .++...+++|+.++.++++++..     .+.++||++||.......
T Consensus        63 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~  142 (252)
T PRK07856         63 AALVDAIVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPS  142 (252)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCC
Confidence            77763       5799999998643221      12234578999999999988753     234689999997653221


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHHH------CCCCEEEEecCcccCCCccc--ccccceeeccCCcccCCCCCHHHHHHH
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAY--KETHNITLSQEDTLFGGQVSNLQVAEL  291 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~------~g~~~~ivRpg~v~gp~~~~--~~~~~~~~~~~~~~~~~~i~~~DvA~~  291 (380)
                            .....|+.+|.+.+.+++.      ..++++.|+||.+.++....  ...............+....++|+|++
T Consensus       143 ------~~~~~Y~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~  216 (252)
T PRK07856        143 ------PGTAAYGAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVPLGRLATPADIAWA  216 (252)
T ss_pred             ------CCCchhHHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhhhccCHHHHHHHhhcCCCCCCcCHHHHHHH
Confidence                  2235699999999988762      23899999999998774211  000000000011122345789999999


Q ss_pred             HHHHHhCC-CCccCcEEEEecCCCC
Q 016901          292 LACMAKNR-SLSYCKVVEVIAETTA  315 (380)
Q Consensus       292 i~~~l~~~-~~~~~~~~ni~~~~~~  315 (380)
                      ++.++... ....|..+.+-++...
T Consensus       217 ~~~L~~~~~~~i~G~~i~vdgg~~~  241 (252)
T PRK07856        217 CLFLASDLASYVSGANLEVHGGGER  241 (252)
T ss_pred             HHHHcCcccCCccCCEEEECCCcch
Confidence            99998754 3457888888777543

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.84  E-value=1.6e-19  Score=167.01  Aligned_cols=197  Identities=16%  Similarity=0.037  Sum_probs=141.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      ++++|||||+|+||++++++|+++|++|++++|+.++.+++...+.               ..++.++++|++|.+++.+
T Consensus         1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------------~~~~~~~~~D~~~~~~v~~   65 (260)
T PRK08267          1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG---------------AGNAWTGALDVTDRAAWDA   65 (260)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc---------------CCceEEEEecCCCHHHHHH
Confidence            3689999999999999999999999999999999887666544322               1468999999999888877


Q ss_pred             Hhc--------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCCCCc
Q 016901          160 ALG--------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFP  221 (380)
Q Consensus       160 a~~--------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~~~~  221 (380)
                      +++        ++|+||||||......      .++...+++|+.++.++++++.    ..+..+||++||.......  
T Consensus        66 ~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~--  143 (260)
T PRK08267         66 ALADFAAATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQ--  143 (260)
T ss_pred             HHHHHHHHcCCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCC--
Confidence            653        5799999999653221      1233457899999999988774    3456789999997542211  


Q ss_pred             hhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHH
Q 016901          222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLAC  294 (380)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~  294 (380)
                          .....|+.+|...+.+.+       ..|+++++|+||++.++..... ...... .........+.++|+|++++.
T Consensus       144 ----~~~~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~-~~~~~~-~~~~~~~~~~~~~~va~~~~~  217 (260)
T PRK08267        144 ----PGLAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGT-SNEVDA-GSTKRLGVRLTPEDVAEAVWA  217 (260)
T ss_pred             ----CCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCcccccc-cchhhh-hhHhhccCCCCHHHHHHHHHH
Confidence                123469999999887665       2589999999999976532110 000000 000111235788999999999


Q ss_pred             HHhCC
Q 016901          295 MAKNR  299 (380)
Q Consensus       295 ~l~~~  299 (380)
                      ++++.
T Consensus       218 ~~~~~  222 (260)
T PRK08267        218 AVQHP  222 (260)
T ss_pred             HHhCC
Confidence            99754

>PRK12742 oxidoreductase; Provisional

Probab=99.84  E-value=9.8e-20  Score=165.83  Aligned_cols=212  Identities=16%  Similarity=0.186  Sum_probs=145.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC-chhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS-VQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~  155 (380)
                      .+++++||||||+|+||+++++.|+++|++|+++.|+ .+..+++..   .               .++.++.+|++|.+
T Consensus         3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~---~---------------~~~~~~~~D~~~~~   64 (237)
T PRK12742          3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQ---E---------------TGATAVQTDSADRD   64 (237)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHH---H---------------hCCeEEecCCCCHH
Confidence            3467899999999999999999999999999887664 444333321   1               23567889999988


Q ss_pred             cHHHHh---cCCCEEEEccccCccc------cCCCCCcchhhHHHHHHHHHHHHHc--CCCEEEEEccCCCCCCCCchhh
Q 016901          156 QIEPAL---GNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFPAAI  224 (380)
Q Consensus       156 ~~~~a~---~~~d~Vi~~Ag~~~~~------~~~~~~~~~~nv~g~~~ll~a~~~~--~v~r~V~~SS~~~~~~~~~~~~  224 (380)
                      ++.+++   +++|+||||||.....      ..++...+++|+.++.+++..+...  ..+++|++||.......     
T Consensus        65 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~-----  139 (237)
T PRK12742         65 AVIDVVRKSGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDRMP-----  139 (237)
T ss_pred             HHHHHHHHhCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccccCC-----
Confidence            877766   3589999999864321      1123445889999999887666543  24689999997652211     


Q ss_pred             hchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHHHHh
Q 016901          225 LNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAK  297 (380)
Q Consensus       225 ~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~  297 (380)
                      ......|+.+|++.|.+++       ..|+++++|+||.+.++........ ..........+.+.+++|+|+++..++.
T Consensus       140 ~~~~~~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~-~~~~~~~~~~~~~~~p~~~a~~~~~l~s  218 (237)
T PRK12742        140 VAGMAAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANGPM-KDMMHSFMAIKRHGRPEEVAGMVAWLAG  218 (237)
T ss_pred             CCCCcchHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCccccccHH-HHHHHhcCCCCCCCCHHHHHHHHHHHcC
Confidence            1234579999999997775       2689999999999987642110000 0000011122356899999999999987


Q ss_pred             CCC-CccCcEEEEecC
Q 016901          298 NRS-LSYCKVVEVIAE  312 (380)
Q Consensus       298 ~~~-~~~~~~~ni~~~  312 (380)
                      +.. ...|..+.+-++
T Consensus       219 ~~~~~~~G~~~~~dgg  234 (237)
T PRK12742        219 PEASFVTGAMHTIDGA  234 (237)
T ss_pred             cccCcccCCEEEeCCC
Confidence            643 235677766554

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.84  E-value=1.6e-19  Score=164.31  Aligned_cols=211  Identities=18%  Similarity=0.162  Sum_probs=146.3

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEeCCc-hhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHHh
Q 016901           83 AFVAGATGKVGSRTVRELLKLGFRVRAGVRSV-QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPAL  161 (380)
Q Consensus        83 vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a~  161 (380)
                      |+|||++|+||++++++|+++|++|++++|+. +......+.++..+             .++.++.+|++|.+++++++
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~-------------~~~~~~~~D~~~~~~~~~~~   67 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYG-------------VKALGVVCDVSDREDVKAVV   67 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcC-------------CceEEEEecCCCHHHHHHHH
Confidence            58999999999999999999999999999875 33333333332211             45889999999998887776


Q ss_pred             c-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHHH----cCCCEEEEEccCCCCCCCCchhh
Q 016901          162 G-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFGFPAAI  224 (380)
Q Consensus       162 ~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~~----~~v~r~V~~SS~~~~~~~~~~~~  224 (380)
                      .       .+|+|||++|......      ..++..+++|+.++.++++++..    .+.++||++||.+... +.    
T Consensus        68 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~-g~----  142 (239)
T TIGR01830        68 EEIEEELGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLM-GN----  142 (239)
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccC-CC----
Confidence            3       5799999999653221      12334477899999999998864    4567999999975432 21    


Q ss_pred             hchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHHHHh
Q 016901          225 LNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAK  297 (380)
Q Consensus       225 ~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~  297 (380)
                       .....|+.+|.+.+.+++       ..|+++++++||.+.++.....................+.+++|+|++++.++.
T Consensus       143 -~~~~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~  221 (239)
T TIGR01830       143 -AGQANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTDKLSEKVKKKILSQIPLGRFGTPEEVANAVAFLAS  221 (239)
T ss_pred             -CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhhcChHHHHHHHhcCCcCCCcCHHHHHHHHHHHhC
Confidence             123469999998886654       268999999999997763211100000000011113357899999999998885


Q ss_pred             CCC-CccCcEEEEecC
Q 016901          298 NRS-LSYCKVVEVIAE  312 (380)
Q Consensus       298 ~~~-~~~~~~~ni~~~  312 (380)
                      ... ...+++||+.++
T Consensus       222 ~~~~~~~g~~~~~~~g  237 (239)
T TIGR01830       222 DEASYITGQVIHVDGG  237 (239)
T ss_pred             cccCCcCCCEEEeCCC
Confidence            532 245789998765

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.84  E-value=5.2e-19  Score=164.90  Aligned_cols=196  Identities=13%  Similarity=0.131  Sum_probs=138.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      +|+++||||+|+||+++++.|+++|++|++++|+.++...+..                   .+++++.+|++|.+++++
T Consensus         1 mk~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-------------------~~~~~~~~Dl~~~~~~~~   61 (274)
T PRK05693          1 MPVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAA-------------------AGFTAVQLDVNDGAALAR   61 (274)
T ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-------------------CCCeEEEeeCCCHHHHHH
Confidence            3689999999999999999999999999999999876554432                   357788999999988877


Q ss_pred             Hh-------cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHHH---cCCCEEEEEccCCCCCCCCchh
Q 016901          160 AL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATI---AKVNHFIMVSSLGTNKFGFPAA  223 (380)
Q Consensus       160 a~-------~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~~---~~v~r~V~~SS~~~~~~~~~~~  223 (380)
                      ++       +++|+||||||......      .++...+++|+.|+.++++++..   .+.+++|++||.......    
T Consensus        62 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~----  137 (274)
T PRK05693         62 LAEELEAEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVT----  137 (274)
T ss_pred             HHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCC----
Confidence            65       46899999998643221      12234478999999988887743   244689999996542211    


Q ss_pred             hhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccce-eeccCCc--------------ccCC
Q 016901          224 ILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNI-TLSQEDT--------------LFGG  281 (380)
Q Consensus       224 ~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~-~~~~~~~--------------~~~~  281 (380)
                        .....|+.+|.+.+.+.+       ..|+++++|+||.+.++.......... .......              ....
T Consensus       138 --~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (274)
T PRK05693        138 --PFAGAYCASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQFASNASREAEQLLAEQSPWWPLREHIQARARASQDN  215 (274)
T ss_pred             --CCccHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccccccccccccchhhcCCCCCccHHHHHHHHHHHHhccCC
Confidence              123469999999887654       379999999999998763211100000 0000000              0012


Q ss_pred             CCCHHHHHHHHHHHHhCCC
Q 016901          282 QVSNLQVAELLACMAKNRS  300 (380)
Q Consensus       282 ~i~~~DvA~~i~~~l~~~~  300 (380)
                      ..+++|+|+.++.++..+.
T Consensus       216 ~~~~~~~a~~i~~~~~~~~  234 (274)
T PRK05693        216 PTPAAEFARQLLAAVQQSP  234 (274)
T ss_pred             CCCHHHHHHHHHHHHhCCC
Confidence            4689999999999998655

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.84  E-value=1.2e-19  Score=167.19  Aligned_cols=214  Identities=13%  Similarity=0.067  Sum_probs=147.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +.+|+++||||+|+||++++++|+++|++|+++.|+..  +...+.++..             ..++.++.+|++|.+++
T Consensus         6 l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~~-------------~~~~~~~~~Dl~~~~~~   70 (251)
T PRK12481          6 LNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEAL-------------GRKFHFITADLIQQKDI   70 (251)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHHc-------------CCeEEEEEeCCCCHHHH
Confidence            46789999999999999999999999999999888643  2222222221             15688999999999888


Q ss_pred             HHHh-------cCCCEEEEccccCccc------cCCCCCcchhhHHHHHHHHHHHH----HcC-CCEEEEEccCCCCCCC
Q 016901          158 EPAL-------GNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAAT----IAK-VNHFIMVSSLGTNKFG  219 (380)
Q Consensus       158 ~~a~-------~~~d~Vi~~Ag~~~~~------~~~~~~~~~~nv~g~~~ll~a~~----~~~-v~r~V~~SS~~~~~~~  219 (380)
                      ++++       +++|++|||||.....      ..++...+++|+.++..+++++.    +.+ .++||++||.......
T Consensus        71 ~~~~~~~~~~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~  150 (251)
T PRK12481         71 DSIVSQAVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGG  150 (251)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCC
Confidence            7776       3689999999964321      12344558899999888877664    333 3689999997653321


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccccc-ccce-eeccCCcccCCCCCHHHHHH
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE-THNI-TLSQEDTLFGGQVSNLQVAE  290 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~-~~~~-~~~~~~~~~~~~i~~~DvA~  290 (380)
                            .....|+.+|.+.+.+.+       .+|++++.|+||++.++...... .... .........+.+..++|+|+
T Consensus       151 ------~~~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~peeva~  224 (251)
T PRK12481        151 ------IRVPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEAILERIPASRWGTPDDLAG  224 (251)
T ss_pred             ------CCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChHHHHHHHhcCCCCCCcCHHHHHH
Confidence                  122469999999987765       37999999999999876321100 0000 00000111234679999999


Q ss_pred             HHHHHHhCC-CCccCcEEEEecC
Q 016901          291 LLACMAKNR-SLSYCKVVEVIAE  312 (380)
Q Consensus       291 ~i~~~l~~~-~~~~~~~~ni~~~  312 (380)
                      ++..++.+. ....|.++.+.++
T Consensus       225 ~~~~L~s~~~~~~~G~~i~vdgg  247 (251)
T PRK12481        225 PAIFLSSSASDYVTGYTLAVDGG  247 (251)
T ss_pred             HHHHHhCccccCcCCceEEECCC
Confidence            999999753 3345677766554

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.84  E-value=1.2e-19  Score=165.90  Aligned_cols=187  Identities=14%  Similarity=0.126  Sum_probs=140.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      ++++||||+|+||++++++|+++|++|++++|++++.+++.+.                 ..++.++.+|++|.++++++
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~-----------------~~~~~~~~~D~~~~~~~~~~   64 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ-----------------SANIFTLAFDVTDHPGTKAA   64 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh-----------------cCCCeEEEeeCCCHHHHHHH
Confidence            6799999999999999999999999999999998766554321                 14688899999999999988


Q ss_pred             hcC----CCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHHHc--CCCEEEEEccCCCCCCCCchhhhchh
Q 016901          161 LGN----ASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFPAAILNLF  228 (380)
Q Consensus       161 ~~~----~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~~~--~v~r~V~~SS~~~~~~~~~~~~~~~~  228 (380)
                      ++.    .|.+|||||......      .++...+++|+.|+.++++++...  +.+++|++||...... .     ...
T Consensus        65 ~~~~~~~~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~-~-----~~~  138 (240)
T PRK06101         65 LSQLPFIPELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELA-L-----PRA  138 (240)
T ss_pred             HHhcccCCCEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccC-C-----CCC
Confidence            854    689999998542111      112345889999999999998752  2357999998654221 1     223


Q ss_pred             hHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHHHHhCCC
Q 016901          229 WGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRS  300 (380)
Q Consensus       229 ~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~~  300 (380)
                      ..|+.+|..++.+.+       .+|++++++|||++++|......     .  .   ....++++|+|+.++..++...
T Consensus       139 ~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~~-----~--~---~~~~~~~~~~a~~i~~~i~~~~  207 (240)
T PRK06101        139 EAYGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDKNT-----F--A---MPMIITVEQASQEIRAQLARGK  207 (240)
T ss_pred             chhhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCCCC-----C--C---CCcccCHHHHHHHHHHHHhcCC
Confidence            469999999998764       46999999999999987432110     0  0   1124799999999999998754

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.84  E-value=9.7e-20  Score=167.41  Aligned_cols=208  Identities=12%  Similarity=0.066  Sum_probs=148.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +.++++|||||+|+||++++++|+++|++|++++|+.  ...                    ...++.++++|++|.+++
T Consensus         6 ~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~--~~~--------------------~~~~~~~~~~D~~~~~~~   63 (252)
T PRK08220          6 FSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF--LTQ--------------------EDYPFATFVLDVSDAAAV   63 (252)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch--hhh--------------------cCCceEEEEecCCCHHHH
Confidence            3568999999999999999999999999999999986  100                    015688999999999888


Q ss_pred             HHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCCCC
Q 016901          158 EPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~~~  220 (380)
                      .++++       .+|+||||+|......      .++...+++|+.++.++++++.    +.+.++||++||.+....  
T Consensus        64 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~--  141 (252)
T PRK08220         64 AQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVP--  141 (252)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccC--
Confidence            87764       4899999998653221      1233447899999999988874    345568999999765321  


Q ss_pred             chhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccc----cceee------ccCCcccCCCC
Q 016901          221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET----HNITL------SQEDTLFGGQV  283 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~----~~~~~------~~~~~~~~~~i  283 (380)
                          ......|+.+|...+.+++       ..|+++++++||.+++|.......    .....      .........++
T Consensus       142 ----~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (252)
T PRK08220        142 ----RIGMAAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIA  217 (252)
T ss_pred             ----CCCCchhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcCCCcccC
Confidence                1234579999999987765       278999999999999885321000    00000      00111234578


Q ss_pred             CHHHHHHHHHHHHhCC-CCccCcEEEEecCC
Q 016901          284 SNLQVAELLACMAKNR-SLSYCKVVEVIAET  313 (380)
Q Consensus       284 ~~~DvA~~i~~~l~~~-~~~~~~~~ni~~~~  313 (380)
                      +++|+|++++.++.+. ....++++.+.++.
T Consensus       218 ~~~dva~~~~~l~~~~~~~~~g~~i~~~gg~  248 (252)
T PRK08220        218 RPQEIANAVLFLASDLASHITLQDIVVDGGA  248 (252)
T ss_pred             CHHHHHHHHHHHhcchhcCccCcEEEECCCe
Confidence            9999999999999754 23456777666653

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.84  E-value=6e-19  Score=161.84  Aligned_cols=194  Identities=16%  Similarity=0.164  Sum_probs=142.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      +++++||||+|+||++++++|+++|++|++++|++++.+++...+....           ...++.++++|++|.+++.+
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-----------~~~~~~~~~~D~~~~~~~~~   70 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARY-----------PGIKVAVAALDVNDHDQVFE   70 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhC-----------CCceEEEEEcCCCCHHHHHH
Confidence            4689999999999999999999999999999999887766655443210           11468899999999988776


Q ss_pred             Hh-------cCCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCCCCch
Q 016901          160 AL-------GNASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFPA  222 (380)
Q Consensus       160 a~-------~~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~~~~~  222 (380)
                      ++       +++|+||||||.......      .....+++|+.++.++++++.    +.+.++||++||.+.... .+ 
T Consensus        71 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-~~-  148 (248)
T PRK08251         71 VFAEFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRG-LP-  148 (248)
T ss_pred             HHHHHHHHcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccC-CC-
Confidence            65       468999999986533221      112346799999988887763    556779999999755321 11 


Q ss_pred             hhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHHH
Q 016901          223 AILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACM  295 (380)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~  295 (380)
                         .+...|+.+|.+.+.+++       ..++++++++||++.++......         .  ....++.+|.|+.++.+
T Consensus       149 ---~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~---------~--~~~~~~~~~~a~~i~~~  214 (248)
T PRK08251        149 ---GVKAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKAK---------S--TPFMVDTETGVKALVKA  214 (248)
T ss_pred             ---CCcccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhccc---------c--CCccCCHHHHHHHHHHH
Confidence               123569999999887764       25799999999999876321110         0  01248899999999999


Q ss_pred             HhCCC
Q 016901          296 AKNRS  300 (380)
Q Consensus       296 l~~~~  300 (380)
                      +++..
T Consensus       215 ~~~~~  219 (248)
T PRK08251        215 IEKEP  219 (248)
T ss_pred             HhcCC
Confidence            98654

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.84  E-value=4e-19  Score=164.87  Aligned_cols=218  Identities=15%  Similarity=0.104  Sum_probs=151.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .+++++++||||+|+||++++++|+++|++|++++|+.+......+.+...+             .++.++.+|++|.++
T Consensus         6 ~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~Dv~~~~~   72 (264)
T PRK07576          6 DFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAG-------------PEGLGVSADVRDYAA   72 (264)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhC-------------CceEEEECCCCCHHH
Confidence            4567899999999999999999999999999999999876665544443221             457889999999988


Q ss_pred             HHHHh-------cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHHHc---CCCEEEEEccCCCCCCCC
Q 016901          157 IEPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIA---KVNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       157 ~~~a~-------~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~~~---~v~r~V~~SS~~~~~~~~  220 (380)
                      +.+++       +++|+||||||......      .++...+++|+.|+.++++++...   .-++||++||......  
T Consensus        73 i~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~--  150 (264)
T PRK07576         73 VEAAFAQIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVP--  150 (264)
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccC--
Confidence            87766       35799999998532111      122334679999999999887532   1258999999754221  


Q ss_pred             chhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCC-c-cccccccee-eccCCcccCCCCCHHHHHH
Q 016901          221 PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPT-D-AYKETHNIT-LSQEDTLFGGQVSNLQVAE  290 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~-~-~~~~~~~~~-~~~~~~~~~~~i~~~DvA~  290 (380)
                          ......|+.+|.+.+.+++.       .|++++.|+||.+.+.. . ......... ........+....++|+|+
T Consensus       151 ----~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  226 (264)
T PRK07576        151 ----MPMQAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPSPELQAAVAQSVPLKRNGTKQDIAN  226 (264)
T ss_pred             ----CCCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcccCHHHHHHHHhcCCCCCCCCHHHHHH
Confidence                12335699999999988762       68999999999987432 1 110000000 0001112345678999999


Q ss_pred             HHHHHHhCCC-CccCcEEEEecCC
Q 016901          291 LLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       291 ~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      +++.++..+. ...+..+.+.++.
T Consensus       227 ~~~~l~~~~~~~~~G~~~~~~gg~  250 (264)
T PRK07576        227 AALFLASDMASYITGVVLPVDGGW  250 (264)
T ss_pred             HHHHHcChhhcCccCCEEEECCCc
Confidence            9999997632 2457777777764

>PRK09242 tropinone reductase; Provisional

Probab=99.84  E-value=2.8e-19  Score=165.07  Aligned_cols=218  Identities=14%  Similarity=0.100  Sum_probs=152.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +.+|+++||||+|+||+++++.|+++|++|++++|+.+..+.+...+....           ...++.++.+|++|.+++
T Consensus         7 ~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~-----------~~~~~~~~~~Dl~~~~~~   75 (257)
T PRK09242          7 LDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEF-----------PEREVHGLAADVSDDEDR   75 (257)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhC-----------CCCeEEEEECCCCCHHHH
Confidence            467899999999999999999999999999999999877766655443210           114688899999998877


Q ss_pred             HHHh-------cCCCEEEEccccCccc------cCCCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCCCC
Q 016901          158 EPAL-------GNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       158 ~~a~-------~~~d~Vi~~Ag~~~~~------~~~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~~~  220 (380)
                      .+++       +++|+||||||.....      ..++...+.+|+.++.++++++.    +.+.++||++||....... 
T Consensus        76 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~-  154 (257)
T PRK09242         76 RAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHV-  154 (257)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCC-
Confidence            6655       4689999999863221      12334457889999999888764    4556799999997653321 


Q ss_pred             chhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccc-ccccee-eccCCcccCCCCCHHHHHHH
Q 016901          221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-ETHNIT-LSQEDTLFGGQVSNLQVAEL  291 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~-~~~~~~-~~~~~~~~~~~i~~~DvA~~  291 (380)
                           .....|+.+|.+.+.+++       ..|++++.|+||++.+|..... ...... ........+.+..++|++.+
T Consensus       155 -----~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~  229 (257)
T PRK09242        155 -----RSGAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPMRRVGEPEEVAAA  229 (257)
T ss_pred             -----CCCcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChHHHHHHHhcCCCCCCcCHHHHHHH
Confidence                 223469999999987765       2689999999999988753211 000000 00011112335689999999


Q ss_pred             HHHHHhCCC-CccCcEEEEecC
Q 016901          292 LACMAKNRS-LSYCKVVEVIAE  312 (380)
Q Consensus       292 i~~~l~~~~-~~~~~~~ni~~~  312 (380)
                      +..++.... ...++.+.+.++
T Consensus       230 ~~~l~~~~~~~~~g~~i~~~gg  251 (257)
T PRK09242        230 VAFLCMPAASYITGQCIAVDGG  251 (257)
T ss_pred             HHHHhCcccccccCCEEEECCC
Confidence            999986532 234677766554

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.83  E-value=4.1e-19  Score=168.40  Aligned_cols=221  Identities=16%  Similarity=0.055  Sum_probs=145.4

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .+.+++|+||||+|+||++++++|+++|++|+++.|+.++.....+.+....           ...++.++.+|++|.++
T Consensus        13 ~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~-----------~~~~~~~~~~Dl~d~~~   81 (306)
T PRK06197         13 DQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAAT-----------PGADVTLQELDLTSLAS   81 (306)
T ss_pred             cCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhC-----------CCCceEEEECCCCCHHH
Confidence            4567899999999999999999999999999999999877665544443210           01468899999999988


Q ss_pred             HHHHh-------cCCCEEEEccccCccc----cCCCCCcchhhHHH----HHHHHHHHHHcCCCEEEEEccCCCCCCCC-
Q 016901          157 IEPAL-------GNASVVICCIGASEKE----VFDITGPYRIDFQA----TKNLVDAATIAKVNHFIMVSSLGTNKFGF-  220 (380)
Q Consensus       157 ~~~a~-------~~~d~Vi~~Ag~~~~~----~~~~~~~~~~nv~g----~~~ll~a~~~~~v~r~V~~SS~~~~~~~~-  220 (380)
                      +++++       +++|+||||||.....    ..+++..+++|+.|    +..+++.+++.+.++||++||.+...++. 
T Consensus        82 v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~  161 (306)
T PRK06197         82 VRAAADALRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAI  161 (306)
T ss_pred             HHHHHHHHHhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCC
Confidence            87765       3589999999864221    12344558899999    55666666666667999999975422110 


Q ss_pred             --c----hhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEE--ecCcccCCCccccccccee-eccCCcccCCCCC
Q 016901          221 --P----AAILNLFWGVLLWKRKAEEALIA-------SGLPYTIV--RPGGMERPTDAYKETHNIT-LSQEDTLFGGQVS  284 (380)
Q Consensus       221 --~----~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~iv--Rpg~v~gp~~~~~~~~~~~-~~~~~~~~~~~i~  284 (380)
                        .    .....+...|+.+|++.+.+.+.       .|++++++  .||++.++........... +......+  ...
T Consensus       162 ~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~~~~~~~~~~~~~~~~~--~~~  239 (306)
T PRK06197        162 HFDDLQWERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARNLPRALRPVATVLAPLL--AQS  239 (306)
T ss_pred             CccccCcccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccccCcHHHHHHHHHHHhhh--cCC
Confidence              0    11233556899999999877652       56776655  7999987632111000000 00000001  245


Q ss_pred             HHHHHHHHHHHHhCCCCccCcEEEEe
Q 016901          285 NLQVAELLACMAKNRSLSYCKVVEVI  310 (380)
Q Consensus       285 ~~DvA~~i~~~l~~~~~~~~~~~ni~  310 (380)
                      ++.-+..++.++..+....+..|+..
T Consensus       240 ~~~g~~~~~~~~~~~~~~~g~~~~~~  265 (306)
T PRK06197        240 PEMGALPTLRAATDPAVRGGQYYGPD  265 (306)
T ss_pred             HHHHHHHHHHHhcCCCcCCCeEEccC
Confidence            66667777777776654456666544

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.83  E-value=7e-19  Score=160.53  Aligned_cols=214  Identities=17%  Similarity=0.160  Sum_probs=145.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-CchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVR-SVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      |++|||||+|+||++++++|+++|++|+++.| ++...+.....+...             ..++.++.+|++|++++.+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~~~~   67 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGAL-------------GFDFRVVEGDVSSFESCKA   67 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhh-------------CCceEEEEecCCCHHHHHH
Confidence            57999999999999999999999999999988 544444333322211             1468899999999887776


Q ss_pred             Hh-------cCCCEEEEccccCccccC------CCCCcchhhHHHHHHHHH----HHHHcCCCEEEEEccCCCCCCCCch
Q 016901          160 AL-------GNASVVICCIGASEKEVF------DITGPYRIDFQATKNLVD----AATIAKVNHFIMVSSLGTNKFGFPA  222 (380)
Q Consensus       160 a~-------~~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~----a~~~~~v~r~V~~SS~~~~~~~~~~  222 (380)
                      ++       +.+|+||||||.......      ++...+++|+.++..+++    .+++.+.++||++||.......   
T Consensus        68 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~---  144 (242)
T TIGR01829        68 AVAKVEAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQ---  144 (242)
T ss_pred             HHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCC---
Confidence            65       358999999986532111      223336789998777544    4556677899999997543211   


Q ss_pred             hhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHHH
Q 016901          223 AILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACM  295 (380)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~  295 (380)
                         .....|..+|...+.+++       ..|+++++++||++.+|.....................+..++|+++++..+
T Consensus       145 ---~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l  221 (242)
T TIGR01829       145 ---FGQTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMAMREDVLNSIVAQIPVGRLGRPEEIAAAVAFL  221 (242)
T ss_pred             ---CCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence               123469999998776654       2689999999999988743211000000000111223457889999999888


Q ss_pred             HhCCC-CccCcEEEEecCC
Q 016901          296 AKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       296 l~~~~-~~~~~~~ni~~~~  313 (380)
                      +.++. ...|+++.+.++.
T Consensus       222 ~~~~~~~~~G~~~~~~gg~  240 (242)
T TIGR01829       222 ASEEAGYITGATLSINGGL  240 (242)
T ss_pred             cCchhcCccCCEEEecCCc
Confidence            86642 3468888887764

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.83  E-value=1.5e-19  Score=165.89  Aligned_cols=215  Identities=16%  Similarity=0.172  Sum_probs=143.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEe-CCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGV-RSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~-R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      +++|+||||+|+||..+++.|+++|++|+++. |++++.+.....++..             ..++.++++|++|.+++.
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~Dl~~~~~~~   68 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAA-------------GGRACVVAGDVANEADVI   68 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-------------CCcEEEEEeccCCHHHHH
Confidence            46899999999999999999999999998765 5555555544444321             146889999999998877


Q ss_pred             HHh-------cCCCEEEEccccCccc--cC-----CCCCcchhhHHHHHHHHHHHHH-c---C---CCEEEEEccCCCCC
Q 016901          159 PAL-------GNASVVICCIGASEKE--VF-----DITGPYRIDFQATKNLVDAATI-A---K---VNHFIMVSSLGTNK  217 (380)
Q Consensus       159 ~a~-------~~~d~Vi~~Ag~~~~~--~~-----~~~~~~~~nv~g~~~ll~a~~~-~---~---v~r~V~~SS~~~~~  217 (380)
                      +++       +.+|+||||||.....  ..     ++...+++|+.++.++++++.+ .   +   -.+||++||.+...
T Consensus        69 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~  148 (248)
T PRK06947         69 AMFDAVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRL  148 (248)
T ss_pred             HHHHHHHHhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcC
Confidence            655       3689999999864321  11     1233478899999888765432 1   1   23699999975432


Q ss_pred             CCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccc-cceeeccCCcccCCCCCHHHHH
Q 016901          218 FGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-HNITLSQEDTLFGGQVSNLQVA  289 (380)
Q Consensus       218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~-~~~~~~~~~~~~~~~i~~~DvA  289 (380)
                      .. +    .....|+.+|...+.+++       ..|++++++|||++.+|....... ............+...+++|+|
T Consensus       149 ~~-~----~~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va  223 (248)
T PRK06947        149 GS-P----NEYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQPGRAARLGAQTPLGRAGEADEVA  223 (248)
T ss_pred             CC-C----CCCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCCHHHHHHHhhcCCCCCCcCHHHHH
Confidence            11 1    112359999999987654       258999999999998874211000 0000000111122357899999


Q ss_pred             HHHHHHHhCCC-CccCcEEEEecC
Q 016901          290 ELLACMAKNRS-LSYCKVVEVIAE  312 (380)
Q Consensus       290 ~~i~~~l~~~~-~~~~~~~ni~~~  312 (380)
                      +.++.++.++. ...|+++.+.++
T Consensus       224 ~~~~~l~~~~~~~~~G~~~~~~gg  247 (248)
T PRK06947        224 ETIVWLLSDAASYVTGALLDVGGG  247 (248)
T ss_pred             HHHHHHcCccccCcCCceEeeCCC
Confidence            99999988754 345777766554

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.83  E-value=3.5e-19  Score=164.25  Aligned_cols=212  Identities=14%  Similarity=0.127  Sum_probs=145.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchh-HHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR-AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      +.+|+++||||+|+||+++++.|+++|++|+++.|+.+. ...+.+                   .++.++.+|++|.++
T Consensus         5 l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~-------------------~~~~~~~~Dl~~~~~   65 (255)
T PRK06463          5 FKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELRE-------------------KGVFTIKCDVGNRDQ   65 (255)
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHh-------------------CCCeEEEecCCCHHH
Confidence            356899999999999999999999999999988775532 222211                   257889999999988


Q ss_pred             HHHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHH----HHHHHHcCCCEEEEEccCCCCCCC
Q 016901          157 IEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNL----VDAATIAKVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       157 ~~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~l----l~a~~~~~v~r~V~~SS~~~~~~~  219 (380)
                      +.++++       ++|+||||||......      .++...+++|+.++..+    ++.+++.+.++||++||.......
T Consensus        66 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~  145 (255)
T PRK06463         66 VKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTA  145 (255)
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCC
Confidence            877763       6899999998643211      12334478899996555    444555566799999997653211


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccc-cccce-ee---ccCCcccCCCCCHHH
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-ETHNI-TL---SQEDTLFGGQVSNLQ  287 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~-~~~~~-~~---~~~~~~~~~~i~~~D  287 (380)
                           ......|+.+|.+.+.+++       ..|+++++|+||++..+..... ..... ..   .......+.+.+++|
T Consensus       146 -----~~~~~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (255)
T PRK06463        146 -----AEGTTFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVLKTTGKPED  220 (255)
T ss_pred             -----CCCccHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCCcCCCcCHHH
Confidence                 1223469999999987765       2689999999999976532110 00000 00   001112334578999


Q ss_pred             HHHHHHHHHhCCC-CccCcEEEEecCC
Q 016901          288 VAELLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       288 vA~~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      +|++++.++.... ...|..+.+.++.
T Consensus       221 va~~~~~l~s~~~~~~~G~~~~~dgg~  247 (255)
T PRK06463        221 IANIVLFLASDDARYITGQVIVADGGR  247 (255)
T ss_pred             HHHHHHHHcChhhcCCCCCEEEECCCe
Confidence            9999999987643 3467888887766

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.83  E-value=5.5e-19  Score=161.73  Aligned_cols=193  Identities=17%  Similarity=0.156  Sum_probs=142.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      +|+|+||||+|+||.+++++|+++|++|++++|++++.+...+.+...            ...+++++++|++|.+++++
T Consensus         1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~------------~~~~~~~~~~Dl~~~~~~~~   68 (243)
T PRK07102          1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRAR------------GAVAVSTHELDILDTASHAA   68 (243)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHh------------cCCeEEEEecCCCChHHHHH
Confidence            468999999999999999999999999999999987766554443221            11578999999999988877


Q ss_pred             Hhc----CCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCCCCchhhh
Q 016901          160 ALG----NASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFPAAIL  225 (380)
Q Consensus       160 a~~----~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~~~~~~~~  225 (380)
                      +++    .+|.||||+|.......      ++...+++|+.++.++++++.    +.+.++||++||...... .     
T Consensus        69 ~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-~-----  142 (243)
T PRK07102         69 FLDSLPALPDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRG-R-----  142 (243)
T ss_pred             HHHHHhhcCCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCC-C-----
Confidence            764    47999999985432211      122347789999998888764    356789999999754221 1     


Q ss_pred             chhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHHHHhC
Q 016901          226 NLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKN  298 (380)
Q Consensus       226 ~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~  298 (380)
                      .....|+.+|...+.+.+       +.|+++++|+||.++++....     ...     .....++++|+|+.++.++.+
T Consensus       143 ~~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~-----~~~-----~~~~~~~~~~~a~~i~~~~~~  212 (243)
T PRK07102        143 ASNYVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAG-----LKL-----PGPLTAQPEEVAKDIFRAIEK  212 (243)
T ss_pred             CCCcccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhhc-----cCC-----CccccCCHHHHHHHHHHHHhC
Confidence            122469999999887654       368999999999999873211     000     011357899999999999987


Q ss_pred             CC
Q 016901          299 RS  300 (380)
Q Consensus       299 ~~  300 (380)
                      +.
T Consensus       213 ~~  214 (243)
T PRK07102        213 GK  214 (243)
T ss_pred             CC
Confidence            54

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.83  E-value=3.5e-19  Score=164.56  Aligned_cols=218  Identities=15%  Similarity=0.162  Sum_probs=153.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFR-VRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~-V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~  155 (380)
                      .+++++++||||+|+||++++++|+++|++ |+++.|+.++.......+...             ..++.++.+|++|++
T Consensus         3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~-------------~~~~~~~~~D~~~~~   69 (260)
T PRK06198          3 RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEAL-------------GAKAVFVQADLSDVE   69 (260)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhc-------------CCeEEEEEccCCCHH
Confidence            456789999999999999999999999998 999999877665544433221             146788999999998


Q ss_pred             cHHHHh-------cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHHH----cC-CCEEEEEccCCCCC
Q 016901          156 QIEPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATI----AK-VNHFIMVSSLGTNK  217 (380)
Q Consensus       156 ~~~~a~-------~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~~----~~-v~r~V~~SS~~~~~  217 (380)
                      ++.+++       +++|+||||||......      ..+...+++|+.++.++++++.+    .+ .+++|++||.....
T Consensus        70 ~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~  149 (260)
T PRK06198         70 DCRRVVAAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHG  149 (260)
T ss_pred             HHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCccccc
Confidence            887766       36899999998643211      11233478899999999887743    22 35899999976532


Q ss_pred             CCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccccccc---c-ee-e--ccCCcccCCCC
Q 016901          218 FGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH---N-IT-L--SQEDTLFGGQV  283 (380)
Q Consensus       218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~---~-~~-~--~~~~~~~~~~i  283 (380)
                      ..      .....|+.+|...|.+++       ..+++++.++||+++++........   . .. .  ......++.++
T Consensus       150 ~~------~~~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (260)
T PRK06198        150 GQ------PFLAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQPFGRLL  223 (260)
T ss_pred             CC------CCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccCCccCCc
Confidence            11      223469999999998766       2579999999999998753210000   0 00 0  00111234568


Q ss_pred             CHHHHHHHHHHHHhCCC-CccCcEEEEecCC
Q 016901          284 SNLQVAELLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       284 ~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      +++|+|+++..++.+.. ...+++|++.++.
T Consensus       224 ~~~~~a~~~~~l~~~~~~~~~G~~~~~~~~~  254 (260)
T PRK06198        224 DPDEVARAVAFLLSDESGLMTGSVIDFDQSV  254 (260)
T ss_pred             CHHHHHHHHHHHcChhhCCccCceEeECCcc
Confidence            99999999999987543 2457888777665

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.83  E-value=3.8e-19  Score=164.79  Aligned_cols=213  Identities=15%  Similarity=0.079  Sum_probs=149.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++++++||||+|+||++++++|+++|++|++++|+.++.+.+.+.+                ..++.++++|++|.+++
T Consensus         4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----------------~~~~~~~~~D~~~~~~~   67 (263)
T PRK06200          4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF----------------GDHVLVVEGDVTSYADN   67 (263)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----------------CCcceEEEccCCCHHHH
Confidence            46789999999999999999999999999999999987766554321                14678899999998887


Q ss_pred             HHHh-------cCCCEEEEccccCcc--cc--CC-------CCCcchhhHHHHHHHHHHHHHc---CCCEEEEEccCCCC
Q 016901          158 EPAL-------GNASVVICCIGASEK--EV--FD-------ITGPYRIDFQATKNLVDAATIA---KVNHFIMVSSLGTN  216 (380)
Q Consensus       158 ~~a~-------~~~d~Vi~~Ag~~~~--~~--~~-------~~~~~~~nv~g~~~ll~a~~~~---~v~r~V~~SS~~~~  216 (380)
                      ++++       +.+|++|||||....  ..  .+       +...+++|+.++..+++++...   ..+++|++||....
T Consensus        68 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~  147 (263)
T PRK06200         68 QRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSF  147 (263)
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhc
Confidence            7765       368999999996421  11  11       2344788999988888877532   22589999997653


Q ss_pred             CCCCchhhhchhhHHHHHHHHHHHHHHH------CCCCEEEEecCcccCCCccccc----cc---cee----eccCCccc
Q 016901          217 KFGFPAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKE----TH---NIT----LSQEDTLF  279 (380)
Q Consensus       217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~~------~g~~~~ivRpg~v~gp~~~~~~----~~---~~~----~~~~~~~~  279 (380)
                      ...      .....|+.+|.+.+.+++.      .+++++.|.||++..+......    ..   ...    ........
T Consensus       148 ~~~------~~~~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~  221 (263)
T PRK06200        148 YPG------GGGPLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPL  221 (263)
T ss_pred             CCC------CCCchhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcCCCC
Confidence            321      1234699999999987752      3599999999999776321000    00   000    00011122


Q ss_pred             CCCCCHHHHHHHHHHHHhCC--CCccCcEEEEecC
Q 016901          280 GGQVSNLQVAELLACMAKNR--SLSYCKVVEVIAE  312 (380)
Q Consensus       280 ~~~i~~~DvA~~i~~~l~~~--~~~~~~~~ni~~~  312 (380)
                      +....++|+|+++..++.+.  ....|+++.+-++
T Consensus       222 ~r~~~~~eva~~~~fl~s~~~~~~itG~~i~vdgG  256 (263)
T PRK06200        222 QFAPQPEDHTGPYVLLASRRNSRALTGVVINADGG  256 (263)
T ss_pred             CCCCCHHHHhhhhhheecccccCcccceEEEEcCc
Confidence            34678999999999998754  2346777777665

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.83  E-value=3.6e-19  Score=161.47  Aligned_cols=209  Identities=15%  Similarity=0.086  Sum_probs=150.5

Q ss_pred             EEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHHhc-
Q 016901           84 FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALG-  162 (380)
Q Consensus        84 lVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a~~-  162 (380)
                      +||||+|+||++++++|+++|++|++++|++++.......++.              ..+++++.+|++|.+++.++++ 
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~--------------~~~~~~~~~Dl~~~~~~~~~~~~   66 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG--------------GAPVRTAALDITDEAAVDAFFAE   66 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc--------------CCceEEEEccCCCHHHHHHHHHh
Confidence            6999999999999999999999999999997766554433321              1568899999999999988885 


Q ss_pred             --CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCCchhhhchhhHHHHH
Q 016901          163 --NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLW  234 (380)
Q Consensus       163 --~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~~Y~~s  234 (380)
                        .+|++|||+|......      .++...+++|+.++.+++++....+.++||++||.+.....      .....|+.+
T Consensus        67 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~~~------~~~~~Y~~s  140 (230)
T PRK07041         67 AGPFDHVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVRPS------ASGVLQGAI  140 (230)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcCCC------CcchHHHHH
Confidence              4899999998643221      12344478899999999997665566799999998764321      234569999


Q ss_pred             HHHHHHHHHH-----CCCCEEEEecCcccCCCccccccc-c--e-eeccCCcccCCCCCHHHHHHHHHHHHhCCCCccCc
Q 016901          235 KRKAEEALIA-----SGLPYTIVRPGGMERPTDAYKETH-N--I-TLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCK  305 (380)
Q Consensus       235 K~~~E~~l~~-----~g~~~~ivRpg~v~gp~~~~~~~~-~--~-~~~~~~~~~~~~i~~~DvA~~i~~~l~~~~~~~~~  305 (380)
                      |.+.+.+++.     .+++++.++||++.++........ .  . .........+...+++|+|++++.++.+.. ..++
T Consensus       141 K~a~~~~~~~la~e~~~irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~-~~G~  219 (230)
T PRK07041        141 NAALEALARGLALELAPVRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPARRVGQPEDVANAILFLAANGF-TTGS  219 (230)
T ss_pred             HHHHHHHHHHHHHHhhCceEEEEeecccccHHHHhhhccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcCCC-cCCc
Confidence            9999988763     468999999999876532110000 0  0 000000111234678999999999998653 5688


Q ss_pred             EEEEecCC
Q 016901          306 VVEVIAET  313 (380)
Q Consensus       306 ~~ni~~~~  313 (380)
                      .|++.++.
T Consensus       220 ~~~v~gg~  227 (230)
T PRK07041        220 TVLVDGGH  227 (230)
T ss_pred             EEEeCCCe
Confidence            99988775

>PRK08017 oxidoreductase; Provisional

Probab=99.83  E-value=2.9e-19  Score=164.64  Aligned_cols=195  Identities=15%  Similarity=0.100  Sum_probs=138.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      ++|+||||+|+||.++++.|+++|++|+++.|+.++.+.+.+                   .+++.+.+|++|.+++.++
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~-------------------~~~~~~~~D~~~~~~~~~~   63 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNS-------------------LGFTGILLDLDDPESVERA   63 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHh-------------------CCCeEEEeecCCHHHHHHH
Confidence            589999999999999999999999999999999876554322                   3477889999998776655


Q ss_pred             h--------cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHH----HHHHHHcCCCEEEEEccCCCCCCCCch
Q 016901          161 L--------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNL----VDAATIAKVNHFIMVSSLGTNKFGFPA  222 (380)
Q Consensus       161 ~--------~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~l----l~a~~~~~v~r~V~~SS~~~~~~~~~~  222 (380)
                      +        ..+|.+||++|......      .++...+++|+.|+.++    ++++++.+.+++|++||.......   
T Consensus        64 ~~~i~~~~~~~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~---  140 (256)
T PRK08017         64 ADEVIALTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLIST---  140 (256)
T ss_pred             HHHHHHhcCCCCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCC---
Confidence            4        34799999998543211      12234578899888775    566677777899999997443211   


Q ss_pred             hhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccccccc--ceeeccCCcccCCCCCHHHHHHHHH
Q 016901          223 AILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH--NITLSQEDTLFGGQVSNLQVAELLA  293 (380)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~--~~~~~~~~~~~~~~i~~~DvA~~i~  293 (380)
                         .....|+.+|...|.+.+       ..++++++++||.+.++........  .............+++++|+++.+.
T Consensus       141 ---~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~  217 (256)
T PRK08017        141 ---PGRGAYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAARFTLGPEAVVPKLR  217 (256)
T ss_pred             ---CCccHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhcccchhhccchhhhHHHhhcCCCHHHHHHHHH
Confidence               234569999999987653       4789999999999876532110000  0011100111124699999999999


Q ss_pred             HHHhCCC
Q 016901          294 CMAKNRS  300 (380)
Q Consensus       294 ~~l~~~~  300 (380)
                      .++.++.
T Consensus       218 ~~~~~~~  224 (256)
T PRK08017        218 HALESPK  224 (256)
T ss_pred             HHHhCCC
Confidence            9998866

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.83  E-value=2.8e-19  Score=162.49  Aligned_cols=203  Identities=17%  Similarity=0.148  Sum_probs=143.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      .+++|+||||+|+||++++++|+++|++|+++.|+..+.                        ...+++.+|++|.+++.
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~------------------------~~~~~~~~D~~~~~~~~   57 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD------------------------FPGELFACDLADIEQTA   57 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc------------------------cCceEEEeeCCCHHHHH
Confidence            457899999999999999999999999999999986531                        11257889999998887


Q ss_pred             HHhc------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCCCCch
Q 016901          159 PALG------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGFPA  222 (380)
Q Consensus       159 ~a~~------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~~~~~  222 (380)
                      +++.      ++|+||||||......      .++...+++|+.++.++++++    ++.+.++||++||.+..  +.  
T Consensus        58 ~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~--~~--  133 (234)
T PRK07577         58 ATLAQINEIHPVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIF--GA--  133 (234)
T ss_pred             HHHHHHHHhCCCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcccccc--CC--
Confidence            7764      6899999999653322      122334778888877776554    45677899999997642  21  


Q ss_pred             hhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccc--cce--eeccCCcccCCCCCHHHHHHH
Q 016901          223 AILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET--HNI--TLSQEDTLFGGQVSNLQVAEL  291 (380)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~--~~~--~~~~~~~~~~~~i~~~DvA~~  291 (380)
                         .....|+.+|...+.+++       ..|+++++||||.+.++.......  ...  .... ....+....++|+|.+
T Consensus       134 ---~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~  209 (234)
T PRK07577        134 ---LDRTSYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLA-SIPMRRLGTPEEVAAA  209 (234)
T ss_pred             ---CCchHHHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhh-cCCCCCCcCHHHHHHH
Confidence               123579999999987764       369999999999998774211000  000  0000 1112234589999999


Q ss_pred             HHHHHhCCC-CccCcEEEEecCC
Q 016901          292 LACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       292 i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      ++.++..+. ...+..+.+.++.
T Consensus       210 ~~~l~~~~~~~~~g~~~~~~g~~  232 (234)
T PRK07577        210 IAFLLSDDAGFITGQVLGVDGGG  232 (234)
T ss_pred             HHHHhCcccCCccceEEEecCCc
Confidence            999997653 2457788776654

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.83  E-value=8.2e-19  Score=161.51  Aligned_cols=215  Identities=13%  Similarity=0.108  Sum_probs=149.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      +|+++||||+|+||+++++.|+++|++|+++.|+.++.+...+.+...             ..++.++.+|++|++++++
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~~~~   67 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQF-------------PGQVLTVQMDVRNPEDVQK   67 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-------------CCcEEEEEecCCCHHHHHH
Confidence            368999999999999999999999999999999987766655544321             1468899999999988877


Q ss_pred             Hh-------cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHHH----cC-CCEEEEEccCCCCCCCCc
Q 016901          160 AL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATI----AK-VNHFIMVSSLGTNKFGFP  221 (380)
Q Consensus       160 a~-------~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~~----~~-v~r~V~~SS~~~~~~~~~  221 (380)
                      ++       +++|+||||||......      .++...+++|+.|+.++++++.+    .+ .++||++||.......  
T Consensus        68 ~~~~~~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~--  145 (252)
T PRK07677         68 MVEQIDEKFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAG--  145 (252)
T ss_pred             HHHHHHHHhCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCC--
Confidence            65       46899999998532111      12344588999999999988843    22 3689999997543211  


Q ss_pred             hhhhchhhHHHHHHHHHHHHHH--------HCCCCEEEEecCcccCCCcccc--cccce-eeccCCcccCCCCCHHHHHH
Q 016901          222 AAILNLFWGVLLWKRKAEEALI--------ASGLPYTIVRPGGMERPTDAYK--ETHNI-TLSQEDTLFGGQVSNLQVAE  290 (380)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~--------~~g~~~~ivRpg~v~gp~~~~~--~~~~~-~~~~~~~~~~~~i~~~DvA~  290 (380)
                          .....|+.+|.+.+.+.+        ++|++++.|+||.+.++.....  ..... .........+.+..++|+|+
T Consensus       146 ----~~~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~  221 (252)
T PRK07677        146 ----PGVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPLGRLGTPEEIAG  221 (252)
T ss_pred             ----CCCcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhccCCCCCCCCHHHHHH
Confidence                122369999999887765        2589999999999985421100  00000 00001112345688999999


Q ss_pred             HHHHHHhCC-CCccCcEEEEecCC
Q 016901          291 LLACMAKNR-SLSYCKVVEVIAET  313 (380)
Q Consensus       291 ~i~~~l~~~-~~~~~~~~ni~~~~  313 (380)
                      ++..++... ....|.++.+.++.
T Consensus       222 ~~~~l~~~~~~~~~g~~~~~~gg~  245 (252)
T PRK07677        222 LAYFLLSDEAAYINGTCITMDGGQ  245 (252)
T ss_pred             HHHHHcCccccccCCCEEEECCCe
Confidence            999888754 23457777776654

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.83  E-value=1.4e-18  Score=160.30  Aligned_cols=213  Identities=17%  Similarity=0.136  Sum_probs=146.2

Q ss_pred             CCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEeCCch-----------hHHHHHHHHHhhhhcccccccCCCCCCceE
Q 016901           79 DDNLAFVAGATG--KVGSRTVRELLKLGFRVRAGVRSVQ-----------RAENLVQSVKQMKLDGELANKGIQPVEMLE  145 (380)
Q Consensus        79 ~~~~vlVtGatG--~iG~~lv~~Ll~~G~~V~~l~R~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  145 (380)
                      ++++||||||+|  +||.+++++|+++|++|+++.|++.           ....+...+...             ..+++
T Consensus         4 ~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~   70 (256)
T PRK12748          4 MKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESY-------------GVRCE   70 (256)
T ss_pred             CCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhc-------------CCeEE
Confidence            568999999995  7999999999999999999998721           111122222211             14689


Q ss_pred             EEEcCCCChhcHHHHh-------cCCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHHHHc----CCCEEE
Q 016901          146 LVECDLEKRVQIEPAL-------GNASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAATIA----KVNHFI  208 (380)
Q Consensus       146 ~~~~Dl~d~~~~~~a~-------~~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~~~~----~v~r~V  208 (380)
                      ++.+|++|.+++..++       +.+|+||||||.......      ++...+++|+.++.++++++...    +.++||
T Consensus        71 ~~~~D~~~~~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv  150 (256)
T PRK12748         71 HMEIDLSQPYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRII  150 (256)
T ss_pred             EEECCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEE
Confidence            9999999988876655       458999999986432221      22334779999999999887542    346899


Q ss_pred             EEccCCCCCCCCchhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcccccccceeeccCCcccCC
Q 016901          209 MVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGG  281 (380)
Q Consensus       209 ~~SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~  281 (380)
                      ++||.......      .....|+.+|++.+.+++.       .|++++.|+||.+..+.......... .  .......
T Consensus       151 ~~ss~~~~~~~------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~~~~~~~-~--~~~~~~~  221 (256)
T PRK12748        151 NLTSGQSLGPM------PDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITEELKHHL-V--PKFPQGR  221 (256)
T ss_pred             EECCccccCCC------CCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCChhHHHhh-h--ccCCCCC
Confidence            99997653221      2234699999999987652       68999999999987763211000000 0  0111123


Q ss_pred             CCCHHHHHHHHHHHHhCCC-CccCcEEEEecCC
Q 016901          282 QVSNLQVAELLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       282 ~i~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      +..++|+|+.+..++.... ...+.++++.++.
T Consensus       222 ~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~g~  254 (256)
T PRK12748        222 VGEPVDAARLIAFLVSEEAKWITGQVIHSEGGF  254 (256)
T ss_pred             CcCHHHHHHHHHHHhCcccccccCCEEEecCCc
Confidence            5678999999998887643 3457888887653

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.83  E-value=1.3e-19  Score=173.17  Aligned_cols=169  Identities=14%  Similarity=0.171  Sum_probs=124.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      ..+++|+||||+|+||.++++.|+++|++|++++|+.++.+...+.+..             ...++.++.+|++|.+++
T Consensus         4 ~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~-------------~~~~~~~~~~Dl~~~~~v   70 (322)
T PRK07453          4 DAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGI-------------PPDSYTIIHIDLGDLDSV   70 (322)
T ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhc-------------cCCceEEEEecCCCHHHH
Confidence            4678999999999999999999999999999999998877665544321             014688999999999888


Q ss_pred             HHHhc-------CCCEEEEccccCccc-------cCCCCCcchhhHHHHHHHHHHHHH----cC--CCEEEEEccCCCCC
Q 016901          158 EPALG-------NASVVICCIGASEKE-------VFDITGPYRIDFQATKNLVDAATI----AK--VNHFIMVSSLGTNK  217 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~~~-------~~~~~~~~~~nv~g~~~ll~a~~~----~~--v~r~V~~SS~~~~~  217 (380)
                      .++++       .+|+||||||.....       ..+++..+++|+.|+.++++++..    .+  .+|||++||.....
T Consensus        71 ~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~  150 (322)
T PRK07453         71 RRFVDDFRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANP  150 (322)
T ss_pred             HHHHHHHHHhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCc
Confidence            87763       489999999964221       112344588999999988877653    33  35999999965421


Q ss_pred             ---CCC---c-----------------------hhhhchhhHHHHHHHHHHHHHH----H----CCCCEEEEecCcccC
Q 016901          218 ---FGF---P-----------------------AAILNLFWGVLLWKRKAEEALI----A----SGLPYTIVRPGGMER  259 (380)
Q Consensus       218 ---~~~---~-----------------------~~~~~~~~~Y~~sK~~~E~~l~----~----~g~~~~ivRpg~v~g  259 (380)
                         .+.   +                       .....+...|+.||.+.+.+.+    .    .|++++.++||+|++
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~  229 (322)
T PRK07453        151 KELGGKIPIPAPADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVAD  229 (322)
T ss_pred             cccCCccCCCCccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccC
Confidence               000   0                       0112455689999988765433    2    489999999999975

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.83  E-value=1.2e-18  Score=161.22  Aligned_cols=217  Identities=17%  Similarity=0.131  Sum_probs=148.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +.+++++||||+|+||++++++|+++|++|+++.|+... .+..+.+...             ..++.++.+|++|.+++
T Consensus         4 ~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~-~~~~~~~~~~-------------~~~~~~~~~Dl~~~~~v   69 (263)
T PRK08226          4 LTGKTALITGALQGIGEGIARVFARHGANLILLDISPEI-EKLADELCGR-------------GHRCTAVVADVRDPASV   69 (263)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHH-HHHHHHHHHh-------------CCceEEEECCCCCHHHH
Confidence            467899999999999999999999999999999998642 2222222211             14678899999999888


Q ss_pred             HHHhc-------CCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCCCC
Q 016901          158 EPALG-------NASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~~~  220 (380)
                      ++++.       .+|+||||||.......      ++...+++|+.++.++++++.    +.+.++||++||........
T Consensus        70 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~  149 (263)
T PRK08226         70 AAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVAD  149 (263)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCC
Confidence            77653       68999999996432211      122347789999998888765    34556899999965422111


Q ss_pred             chhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCccccc------ccc--eeeccCCcccCCCCCH
Q 016901          221 PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE------THN--ITLSQEDTLFGGQVSN  285 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~------~~~--~~~~~~~~~~~~~i~~  285 (380)
                           .....|+.+|.+.+.+++.       .|++++.|+||.+.++......      ...  ..........+.+.++
T Consensus       150 -----~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  224 (263)
T PRK08226        150 -----PGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADP  224 (263)
T ss_pred             -----CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCCCCCCCH
Confidence                 1234699999999877652       5899999999999887321100      000  0000011123346799


Q ss_pred             HHHHHHHHHHHhCC-CCccCcEEEEecCC
Q 016901          286 LQVAELLACMAKNR-SLSYCKVVEVIAET  313 (380)
Q Consensus       286 ~DvA~~i~~~l~~~-~~~~~~~~ni~~~~  313 (380)
                      +|+|+++..++... ....++++.+-++.
T Consensus       225 ~~va~~~~~l~~~~~~~~~g~~i~~dgg~  253 (263)
T PRK08226        225 LEVGELAAFLASDESSYLTGTQNVIDGGS  253 (263)
T ss_pred             HHHHHHHHHHcCchhcCCcCceEeECCCc
Confidence            99999999888643 33457777776664

>PRK08264 short chain dehydrogenase; Validated

Probab=99.83  E-value=9.1e-19  Score=159.62  Aligned_cols=184  Identities=16%  Similarity=0.127  Sum_probs=139.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      +.+++|+||||+|+||+++++.|+++|+ +|++++|+.++... .                   ..++.++.+|++|.++
T Consensus         4 ~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-~-------------------~~~~~~~~~D~~~~~~   63 (238)
T PRK08264          4 IKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-L-------------------GPRVVPLQLDVTDPAS   63 (238)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-c-------------------CCceEEEEecCCCHHH
Confidence            4568999999999999999999999998 99999998765432 0                   1578899999999999


Q ss_pred             HHHHhc---CCCEEEEcccc-Ccccc------CCCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCCCCch
Q 016901          157 IEPALG---NASVVICCIGA-SEKEV------FDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFPA  222 (380)
Q Consensus       157 ~~~a~~---~~d~Vi~~Ag~-~~~~~------~~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~~~~~  222 (380)
                      +.+++.   .+|+|||++|. .....      .++...+++|+.++.++++++.    +.+.++||++||......    
T Consensus        64 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~----  139 (238)
T PRK08264         64 VAAAAEAASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVN----  139 (238)
T ss_pred             HHHHHHhcCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccC----
Confidence            888775   58999999987 22111      1223346789999999988864    456678999999765321    


Q ss_pred             hhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHHH
Q 016901          223 AILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACM  295 (380)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~  295 (380)
                        ......|+.+|..+|.+++.       .|++++++|||.+.++....             .....++++|+++.++..
T Consensus       140 --~~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~-------------~~~~~~~~~~~a~~~~~~  204 (238)
T PRK08264        140 --FPNLGTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAG-------------LDAPKASPADVARQILDA  204 (238)
T ss_pred             --CCCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCccccccccc-------------CCcCCCCHHHHHHHHHHH
Confidence              12345699999999877652       58999999999998763110             011258899999999999


Q ss_pred             HhCCC
Q 016901          296 AKNRS  300 (380)
Q Consensus       296 l~~~~  300 (380)
                      +....
T Consensus       205 ~~~~~  209 (238)
T PRK08264        205 LEAGD  209 (238)
T ss_pred             HhCCC
Confidence            88654

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.83  E-value=1e-18  Score=164.86  Aligned_cols=203  Identities=14%  Similarity=0.064  Sum_probs=145.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +.+++++||||+|+||.++++.|+++|++|++++|+.++.+.+.+.+..              ...+..+.+|++|.+++
T Consensus         7 l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~--------------~~~~~~~~~Dv~d~~~v   72 (296)
T PRK05872          7 LAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG--------------DDRVLTVVADVTDLAAM   72 (296)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC--------------CCcEEEEEecCCCHHHH
Confidence            4678999999999999999999999999999999998877665543321              13566778999999887


Q ss_pred             HHHh-------cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHHHc---CCCEEEEEccCCCCCCCCc
Q 016901          158 EPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIA---KVNHFIMVSSLGTNKFGFP  221 (380)
Q Consensus       158 ~~a~-------~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~~~---~v~r~V~~SS~~~~~~~~~  221 (380)
                      ++++       +++|+||||||......      .++...+++|+.|+.++++++...   ..++||++||.+.....  
T Consensus        73 ~~~~~~~~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~--  150 (296)
T PRK05872         73 QAAAEEAVERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAA--  150 (296)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCC--
Confidence            7665       46899999999653211      123345789999999998887531   23689999997653321  


Q ss_pred             hhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccccccc-ce--eec-cCCcccCCCCCHHHHHH
Q 016901          222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH-NI--TLS-QEDTLFGGQVSNLQVAE  290 (380)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~-~~--~~~-~~~~~~~~~i~~~DvA~  290 (380)
                          .....|+.+|...+.+.+       ..|+++++++||++.++........ ..  .+. .........++++|+|+
T Consensus       151 ----~~~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~  226 (296)
T PRK05872        151 ----PGMAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLPWPLRRTTSVEKCAA  226 (296)
T ss_pred             ----CCchHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhHHHHHhhCCCcccCCCCHHHHHH
Confidence                234579999999997765       3789999999999987632111000 00  000 01112234689999999


Q ss_pred             HHHHHHhCCC
Q 016901          291 LLACMAKNRS  300 (380)
Q Consensus       291 ~i~~~l~~~~  300 (380)
                      +++.++.+..
T Consensus       227 ~i~~~~~~~~  236 (296)
T PRK05872        227 AFVDGIERRA  236 (296)
T ss_pred             HHHHHHhcCC
Confidence            9999998755

>PRK08324 short chain dehydrogenase; Validated

Probab=99.82  E-value=9.9e-19  Score=182.63  Aligned_cols=218  Identities=17%  Similarity=0.186  Sum_probs=155.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +.+++||||||+|+||+++++.|+++|++|++++|+.++.......+..              ..++.++.+|++|.+++
T Consensus       420 l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~--------------~~~v~~v~~Dvtd~~~v  485 (681)
T PRK08324        420 LAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGG--------------PDRALGVACDVTDEAAV  485 (681)
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhc--------------cCcEEEEEecCCCHHHH
Confidence            3568999999999999999999999999999999998776655443221              03688999999999888


Q ss_pred             HHHh-------cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHH----HcCC-CEEEEEccCCCCCCC
Q 016901          158 EPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAKV-NHFIMVSSLGTNKFG  219 (380)
Q Consensus       158 ~~a~-------~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~----~~~v-~r~V~~SS~~~~~~~  219 (380)
                      .+++       +++|+||||||......      ..+...+++|+.|+.++++++.    +.+. ++||++||.......
T Consensus       486 ~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~  565 (681)
T PRK08324        486 QAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPG  565 (681)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCC
Confidence            7766       36899999999653221      1223447899999999977664    4454 689999997653321


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCccc-CCCccccc-------cccee------eccCCcc
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGME-RPTDAYKE-------THNIT------LSQEDTL  278 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~-gp~~~~~~-------~~~~~------~~~~~~~  278 (380)
                            .....|+.+|.+.+.+++.       .|+++++|+||.+| +.......       .....      .......
T Consensus       566 ------~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  639 (681)
T PRK08324        566 ------PNFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNL  639 (681)
T ss_pred             ------CCcHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhhhhhccCChHHHHHHHHhcCC
Confidence                  2345799999999988763       57999999999997 44211100       00000      0111223


Q ss_pred             cCCCCCHHHHHHHHHHHHhC-CCCccCcEEEEecCCCC
Q 016901          279 FGGQVSNLQVAELLACMAKN-RSLSYCKVVEVIAETTA  315 (380)
Q Consensus       279 ~~~~i~~~DvA~~i~~~l~~-~~~~~~~~~ni~~~~~~  315 (380)
                      .+.+++++|+|++++.++.. .....|++|++.++...
T Consensus       640 l~~~v~~~DvA~a~~~l~s~~~~~~tG~~i~vdgG~~~  677 (681)
T PRK08324        640 LKREVTPEDVAEAVVFLASGLLSKTTGAIITVDGGNAA  677 (681)
T ss_pred             cCCccCHHHHHHHHHHHhCccccCCcCCEEEECCCchh
Confidence            34679999999999999853 22356889999888643

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.82  E-value=9.6e-19  Score=163.03  Aligned_cols=216  Identities=12%  Similarity=0.128  Sum_probs=146.4

Q ss_pred             CCCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh
Q 016901           78 KDDNLAFVAGATG--KVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (380)
Q Consensus        78 ~~~~~vlVtGatG--~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~  155 (380)
                      ++++++|||||++  +||++++++|+++|++|++..|+....+.+.+..+..              ....++++|++|.+
T Consensus         5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~--------------g~~~~~~~Dv~d~~   70 (271)
T PRK06505          5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESL--------------GSDFVLPCDVEDIA   70 (271)
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhc--------------CCceEEeCCCCCHH
Confidence            4678999999997  9999999999999999999988754333322221111              22346899999998


Q ss_pred             cHHHHh-------cCCCEEEEccccCccc----------cCCCCCcchhhHHHHHHHHHHHHHc--CCCEEEEEccCCCC
Q 016901          156 QIEPAL-------GNASVVICCIGASEKE----------VFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTN  216 (380)
Q Consensus       156 ~~~~a~-------~~~d~Vi~~Ag~~~~~----------~~~~~~~~~~nv~g~~~ll~a~~~~--~v~r~V~~SS~~~~  216 (380)
                      ++++++       +.+|++|||||.....          ..++...+++|+.++.++++++...  .-+++|++||.+..
T Consensus        71 ~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~  150 (271)
T PRK06505         71 SVDAVFEALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGST  150 (271)
T ss_pred             HHHHHHHHHHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCcc
Confidence            887765       4689999999964311          1123344789999988888766431  12589999997652


Q ss_pred             CCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccccccc-c-eeeccCCcccCCCCCHHH
Q 016901          217 KFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH-N-ITLSQEDTLFGGQVSNLQ  287 (380)
Q Consensus       217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~-~-~~~~~~~~~~~~~i~~~D  287 (380)
                      ..      ...+..|+.+|++.+.+.+       .+|++++.|.||++.++........ . ..........+.+..++|
T Consensus       151 ~~------~~~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pee  224 (271)
T PRK06505        151 RV------MPNYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDARAIFSYQQRNSPLRRTVTIDE  224 (271)
T ss_pred             cc------CCccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcchHHHHHHHhhcCCccccCCHHH
Confidence            21      1233569999999987765       3789999999999987632110000 0 000011112334678999


Q ss_pred             HHHHHHHHHhCCC-CccCcEEEEecCC
Q 016901          288 VAELLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       288 vA~~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      +|++++.++.... ...++++.+-++.
T Consensus       225 va~~~~fL~s~~~~~itG~~i~vdgG~  251 (271)
T PRK06505        225 VGGSALYLLSDLSSGVTGEIHFVDSGY  251 (271)
T ss_pred             HHHHHHHHhCccccccCceEEeecCCc
Confidence            9999999987533 3467788777664

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.82  E-value=6e-19  Score=162.61  Aligned_cols=213  Identities=15%  Similarity=0.120  Sum_probs=145.9

Q ss_pred             CCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh
Q 016901           78 KDDNLAFVAGAT--GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (380)
Q Consensus        78 ~~~~~vlVtGat--G~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~  155 (380)
                      +++|+++||||+  ++||+.++++|+++|++|++..|+. +..+..   +++.            ..++.++++|++|++
T Consensus         5 l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~---~~~~------------~~~~~~~~~Dl~~~~   68 (252)
T PRK06079          5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSL---QKLV------------DEEDLLVECDVASDE   68 (252)
T ss_pred             cCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHH---Hhhc------------cCceeEEeCCCCCHH
Confidence            467899999999  7999999999999999999999973 322222   1110            135788999999998


Q ss_pred             cHHHHh-------cCCCEEEEccccCcc----------ccCCCCCcchhhHHHHHHHHHHHHHc--CCCEEEEEccCCCC
Q 016901          156 QIEPAL-------GNASVVICCIGASEK----------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTN  216 (380)
Q Consensus       156 ~~~~a~-------~~~d~Vi~~Ag~~~~----------~~~~~~~~~~~nv~g~~~ll~a~~~~--~v~r~V~~SS~~~~  216 (380)
                      ++++++       +.+|++|||||....          +..++...+++|+.+...+++++...  .-+++|++||.+..
T Consensus        69 ~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~  148 (252)
T PRK06079         69 SIERAFATIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSE  148 (252)
T ss_pred             HHHHHHHHHHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCcc
Confidence            887665       468999999996431          11123344788999988888777542  12589999997653


Q ss_pred             CCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccc-ccc-cceeeccCCcccCCCCCHHH
Q 016901          217 KFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAY-KET-HNITLSQEDTLFGGQVSNLQ  287 (380)
Q Consensus       217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~-~~~-~~~~~~~~~~~~~~~i~~~D  287 (380)
                      ..      ......|+.+|.+.+.+.+       ..|++++.|.||.|.++.... ... ............+.+..++|
T Consensus       149 ~~------~~~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~ped  222 (252)
T PRK06079        149 RA------IPNYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSRTVDGVGVTIEE  222 (252)
T ss_pred             cc------CCcchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCChHHHHHHHHhcCcccCCCCHHH
Confidence            21      1234579999999998765       378999999999998763211 000 00000011112235688999


Q ss_pred             HHHHHHHHHhCC-CCccCcEEEEecC
Q 016901          288 VAELLACMAKNR-SLSYCKVVEVIAE  312 (380)
Q Consensus       288 vA~~i~~~l~~~-~~~~~~~~ni~~~  312 (380)
                      +|+++..++... ....|+++.+-++
T Consensus       223 va~~~~~l~s~~~~~itG~~i~vdgg  248 (252)
T PRK06079        223 VGNTAAFLLSDLSTGVTGDIIYVDKG  248 (252)
T ss_pred             HHHHHHHHhCcccccccccEEEeCCc
Confidence            999999999764 3345777766554

>TIGR02415 23BDH acetoin reductases

Probab=99.82  E-value=8.5e-19  Score=161.32  Aligned_cols=213  Identities=16%  Similarity=0.169  Sum_probs=147.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      ++++||||+|+||.+++++|+++|++|+++.|+......+.+.+...+             .++.++.+|++|++++.++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~-------------~~~~~~~~Dl~~~~~i~~~   67 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAG-------------GKAVAYKLDVSDKDQVFSA   67 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------------CeEEEEEcCCCCHHHHHHH
Confidence            479999999999999999999999999999998776666555443321             4688999999999888776


Q ss_pred             h-------cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHH----HcC-CCEEEEEccCCCCCCCCch
Q 016901          161 L-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAK-VNHFIMVSSLGTNKFGFPA  222 (380)
Q Consensus       161 ~-------~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~----~~~-v~r~V~~SS~~~~~~~~~~  222 (380)
                      +       ..+|+||||||......      .++...+++|+.++..+++++.    +.+ .+++|++||.......   
T Consensus        68 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---  144 (254)
T TIGR02415        68 IDQAAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGN---  144 (254)
T ss_pred             HHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCC---
Confidence            5       35899999998643211      1223447899999887766654    333 3689999996543211   


Q ss_pred             hhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcccccc-----cceeec------cCCcccCCCCC
Q 016901          223 AILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-----HNITLS------QEDTLFGGQVS  284 (380)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~~-----~~~~~~------~~~~~~~~~i~  284 (380)
                         .....|+.+|.+.+.+++.       .++++++|+||.+.++.......     ......      ......+.+.+
T Consensus       145 ---~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (254)
T TIGR02415       145 ---PILSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSE  221 (254)
T ss_pred             ---CCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhhCCCCCCCC
Confidence               2245699999999877752       58999999999997764211000     000000      00111234789


Q ss_pred             HHHHHHHHHHHHhCCC-CccCcEEEEecC
Q 016901          285 NLQVAELLACMAKNRS-LSYCKVVEVIAE  312 (380)
Q Consensus       285 ~~DvA~~i~~~l~~~~-~~~~~~~ni~~~  312 (380)
                      ++|+++++..++.+.. ...+.++.+-++
T Consensus       222 ~~~~a~~~~~l~~~~~~~~~g~~~~~d~g  250 (254)
T TIGR02415       222 PEDVAGLVSFLASEDSDYITGQSILVDGG  250 (254)
T ss_pred             HHHHHHHHHhhcccccCCccCcEEEecCC
Confidence            9999999999998754 234666655554

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.82  E-value=8.5e-19  Score=162.13  Aligned_cols=214  Identities=16%  Similarity=0.156  Sum_probs=146.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      |+++||||+|+||++++++|+++|++|++++|++++.++..+.+...              .++.++++|++|.++++++
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--------------~~~~~~~~Dv~d~~~~~~~   66 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEY--------------GEVYAVKADLSDKDDLKNL   66 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--------------CCceEEEcCCCCHHHHHHH
Confidence            57999999999999999999999999999999988776665544321              4578899999999888776


Q ss_pred             h-------cCCCEEEEccccCcccc---C-----CCCCcchhhHHHHHHHHH----HHH-HcCCCEEEEEccCCCCCCCC
Q 016901          161 L-------GNASVVICCIGASEKEV---F-----DITGPYRIDFQATKNLVD----AAT-IAKVNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       161 ~-------~~~d~Vi~~Ag~~~~~~---~-----~~~~~~~~nv~g~~~ll~----a~~-~~~v~r~V~~SS~~~~~~~~  220 (380)
                      +       +++|+||||||......   .     ++...+.+|+.+...+..    .+. +.+.++||++||......  
T Consensus        67 ~~~~~~~~g~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~--  144 (259)
T PRK08340         67 VKEAWELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEP--  144 (259)
T ss_pred             HHHHHHhcCCCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCC--
Confidence            6       46899999999642111   1     112224567766554443    333 334569999999866321  


Q ss_pred             chhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcccc-----ccccee-------eccCCcccCC
Q 016901          221 PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-----ETHNIT-------LSQEDTLFGG  281 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~-----~~~~~~-------~~~~~~~~~~  281 (380)
                          ......|+.+|...+.+.+.       .|++++.|.||++.+|.....     ......       ........+.
T Consensus       145 ----~~~~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r  220 (259)
T PRK08340        145 ----MPPLVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTPLKR  220 (259)
T ss_pred             ----CCCchHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCCccC
Confidence                12345699999999887762       689999999999987743110     000000       0001112244


Q ss_pred             CCCHHHHHHHHHHHHhCCC-CccCcEEEEecCCC
Q 016901          282 QVSNLQVAELLACMAKNRS-LSYCKVVEVIAETT  314 (380)
Q Consensus       282 ~i~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~~  314 (380)
                      +..++|+|+++..++.... ...|.++.+.++..
T Consensus       221 ~~~p~dva~~~~fL~s~~~~~itG~~i~vdgg~~  254 (259)
T PRK08340        221 TGRWEELGSLIAFLLSENAEYMLGSTIVFDGAMT  254 (259)
T ss_pred             CCCHHHHHHHHHHHcCcccccccCceEeecCCcC
Confidence            6789999999999998643 34677777776643

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.82  E-value=4.9e-19  Score=163.89  Aligned_cols=219  Identities=12%  Similarity=0.071  Sum_probs=145.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-CchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVR-SVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~  155 (380)
                      .+++++++||||+++||++++++|+++|++|+++.| +.+..+...+.++..            ...++.++.+|++|++
T Consensus         5 ~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~D~~~~~   72 (260)
T PRK08416          5 EMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQK------------YGIKAKAYPLNILEPE   72 (260)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHh------------cCCceEEEEcCCCCHH
Confidence            356789999999999999999999999999988865 444444444433221            0146889999999998


Q ss_pred             cHHHHh-------cCCCEEEEccccCcc------cc------CCCCCcchhhHHHHHHHHHH----HHHcCCCEEEEEcc
Q 016901          156 QIEPAL-------GNASVVICCIGASEK------EV------FDITGPYRIDFQATKNLVDA----ATIAKVNHFIMVSS  212 (380)
Q Consensus       156 ~~~~a~-------~~~d~Vi~~Ag~~~~------~~------~~~~~~~~~nv~g~~~ll~a----~~~~~v~r~V~~SS  212 (380)
                      ++++++       +.+|+||||||....      ..      ......+++|+.+...+.+.    +++.+.++||++||
T Consensus        73 ~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS  152 (260)
T PRK08416         73 TYKELFKKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSS  152 (260)
T ss_pred             HHHHHHHHHHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEec
Confidence            887766       358999999985321      00      11222366777776555444    44445569999999


Q ss_pred             CCCCCCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccc-ccee-eccCCcccCCCC
Q 016901          213 LGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-HNIT-LSQEDTLFGGQV  283 (380)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~-~~~~-~~~~~~~~~~~i  283 (380)
                      .+...+.      .....|+.+|++.+.+++       .+|++++.|.||++..+....... .... ........+.+.
T Consensus       153 ~~~~~~~------~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~r~~  226 (260)
T PRK08416        153 TGNLVYI------ENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSPLNRMG  226 (260)
T ss_pred             cccccCC------CCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCCHHHHHHHHhcCCCCCCC
Confidence            7643221      223469999999998775       268999999999997663111000 0000 000111123468


Q ss_pred             CHHHHHHHHHHHHhCC-CCccCcEEEEecCC
Q 016901          284 SNLQVAELLACMAKNR-SLSYCKVVEVIAET  313 (380)
Q Consensus       284 ~~~DvA~~i~~~l~~~-~~~~~~~~ni~~~~  313 (380)
                      .++|+|.+++.++... ....++.+.+.++.
T Consensus       227 ~p~~va~~~~~l~~~~~~~~~G~~i~vdgg~  257 (260)
T PRK08416        227 QPEDLAGACLFLCSEKASWLTGQTIVVDGGT  257 (260)
T ss_pred             CHHHHHHHHHHHcChhhhcccCcEEEEcCCe
Confidence            8999999999998754 23457777766553

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=99.82  E-value=2.1e-19  Score=155.40  Aligned_cols=235  Identities=16%  Similarity=0.112  Sum_probs=173.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC---eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGF---RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~---~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      +++|||||++|.+|++|++.+.+.|.   +.+....                                  -.+|+++.++
T Consensus         1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s----------------------------------kd~DLt~~a~   46 (315)
T KOG1431|consen    1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS----------------------------------KDADLTNLAD   46 (315)
T ss_pred             CceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc----------------------------------ccccccchHH
Confidence            36899999999999999999998875   2222211                                  1379999999


Q ss_pred             HHHHhc--CCCEEEEccccCccc---cCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCC----Cchh----
Q 016901          157 IEPALG--NASVVICCIGASEKE---VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG----FPAA----  223 (380)
Q Consensus       157 ~~~a~~--~~d~Vi~~Ag~~~~~---~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~----~~~~----  223 (380)
                      .+++|.  ....|||+|+.++.-   .......+..|+.-.-|++..|-++|++++|++.|...++..    .++.    
T Consensus        47 t~~lF~~ekPthVIhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~yPIdEtmvh~  126 (315)
T KOG1431|consen   47 TRALFESEKPTHVIHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSYPIDETMVHN  126 (315)
T ss_pred             HHHHHhccCCceeeehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecCCCCCCCCCHHHhcc
Confidence            999995  579999999866432   223345578899999999999999999999999987764422    1211    


Q ss_pred             --hhchhhHHHHHHHHHHH----HHHHCCCCEEEEecCcccCCCcccccccc--------------------eeeccCCc
Q 016901          224 --ILNLFWGVLLWKRKAEE----ALIASGLPYTIVRPGGMERPTDAYKETHN--------------------ITLSQEDT  277 (380)
Q Consensus       224 --~~~~~~~Y~~sK~~~E~----~l~~~g~~~~ivRpg~v~gp~~~~~~~~~--------------------~~~~~~~~  277 (380)
                        +.+...+|.-.|+.+.-    +-.++|..++.+-|.++|||.+++.....                    +.+.+.+.
T Consensus       127 gpphpsN~gYsyAKr~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~  206 (315)
T KOG1431|consen  127 GPPHPSNFGYSYAKRMIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGS  206 (315)
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCC
Confidence              23334568889977653    33468999999999999999987643222                    22223333


Q ss_pred             ccCCCCCHHHHHHHHHHHHhCCCCccCcEEEEecCC--CCCcchHHHHHHhcCCCCCCCcccCCCCCCCCCCCCCCC
Q 016901          278 LFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAET--TAPLTPMEELLAKIPSQRAEPKESIAPEKSDPAASKSMI  352 (380)
Q Consensus       278 ~~~~~i~~~DvA~~i~~~l~~~~~~~~~~~ni~~~~--~~s~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  352 (380)
                      ..+.|||.+|+|++++.++.+-..  -+.++++.++  ..+++|+++++.++.+..++  ...+..+++..+.+.+.
T Consensus       207 PlRqFiys~DLA~l~i~vlr~Y~~--vEpiils~ge~~EVtI~e~aeaV~ea~~F~G~--l~~DttK~DGq~kKtas  279 (315)
T KOG1431|consen  207 PLRQFIYSDDLADLFIWVLREYEG--VEPIILSVGESDEVTIREAAEAVVEAVDFTGK--LVWDTTKSDGQFKKTAS  279 (315)
T ss_pred             hHHHHhhHhHHHHHHHHHHHhhcC--ccceEeccCccceeEHHHHHHHHHHHhCCCce--EEeeccCCCCCcccccc
Confidence            344689999999999999988553  5677888888  78999999999999887664  44566777777766554

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.82  E-value=2.7e-18  Score=159.15  Aligned_cols=218  Identities=16%  Similarity=0.154  Sum_probs=150.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++++++||||+|+||++++++|+++|++|++++|+.++.+...+.+....           ...++.++.+|++|.+++
T Consensus         6 l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-----------~~~~~~~~~~D~~~~~~v   74 (265)
T PRK07062          6 LEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKF-----------PGARLLAARCDVLDEADV   74 (265)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhC-----------CCceEEEEEecCCCHHHH
Confidence            467899999999999999999999999999999999887766555443210           013678899999999887


Q ss_pred             HHHh-------cCCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCCCC
Q 016901          158 EPAL-------GNASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       158 ~~a~-------~~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~~~  220 (380)
                      .+++       +.+|+||||||.......      ++...+++|+.+...+++++    ++.+.++||++||....... 
T Consensus        75 ~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-  153 (265)
T PRK07062         75 AAFAAAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPE-  153 (265)
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCC-
Confidence            7655       468999999996432111      23344678888766665554    44556799999997653211 


Q ss_pred             chhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcc--ccc--ccceee--------ccCCcccCC
Q 016901          221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDA--YKE--THNITL--------SQEDTLFGG  281 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~--~~~--~~~~~~--------~~~~~~~~~  281 (380)
                           .....|+.+|.+.+.+.+       ..|++++.|+||++..+...  +..  ......        .......+.
T Consensus       154 -----~~~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r  228 (265)
T PRK07062        154 -----PHMVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPLGR  228 (265)
T ss_pred             -----CCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCcCC
Confidence                 223469999998876654       37899999999999876321  000  000000        001112234


Q ss_pred             CCCHHHHHHHHHHHHhCC-CCccCcEEEEecC
Q 016901          282 QVSNLQVAELLACMAKNR-SLSYCKVVEVIAE  312 (380)
Q Consensus       282 ~i~~~DvA~~i~~~l~~~-~~~~~~~~ni~~~  312 (380)
                      +..++|+|+++..++.+. ....|+++.+.++
T Consensus       229 ~~~p~~va~~~~~L~s~~~~~~tG~~i~vdgg  260 (265)
T PRK07062        229 LGRPDEAARALFFLASPLSSYTTGSHIDVSGG  260 (265)
T ss_pred             CCCHHHHHHHHHHHhCchhcccccceEEEcCc
Confidence            678999999999998753 3346778877665

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.82  E-value=3.2e-19  Score=162.34  Aligned_cols=207  Identities=15%  Similarity=0.120  Sum_probs=144.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCCh-hcH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR-VQI  157 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~-~~~  157 (380)
                      ++++++||||+|+||++++++|+++|++|+++.|+.....                      ..++.++.+|+++. +.+
T Consensus         4 ~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~----------------------~~~~~~~~~D~~~~~~~~   61 (235)
T PRK06550          4 MTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDL----------------------SGNFHFLQLDLSDDLEPL   61 (235)
T ss_pred             CCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCccccc----------------------CCcEEEEECChHHHHHHH
Confidence            5689999999999999999999999999999999754310                      14688999999987 444


Q ss_pred             HHHhcCCCEEEEccccCcc--c-----cCCCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCCCCchhhhc
Q 016901          158 EPALGNASVVICCIGASEK--E-----VFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFPAAILN  226 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag~~~~--~-----~~~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~~~~~~~~~  226 (380)
                      .+.++.+|+||||||....  .     ..++...+++|+.++.++++++.    +.+.++||++||.......      .
T Consensus        62 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~------~  135 (235)
T PRK06550         62 FDWVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAG------G  135 (235)
T ss_pred             HHhhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCC------C
Confidence            4555789999999985421  1     11233447899999999988875    3445689999997553221      1


Q ss_pred             hhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccc-cccce-eeccCCcccCCCCCHHHHHHHHHHHHh
Q 016901          227 LFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-ETHNI-TLSQEDTLFGGQVSNLQVAELLACMAK  297 (380)
Q Consensus       227 ~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~-~~~~~-~~~~~~~~~~~~i~~~DvA~~i~~~l~  297 (380)
                      ....|+.+|...+.+.+       ..|+++++|+||++.++..... ..... .........+.+..++|+|++++.++.
T Consensus       136 ~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s  215 (235)
T PRK06550        136 GGAAYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEPGGLADWVARETPIKRWAEPEEVAELTLFLAS  215 (235)
T ss_pred             CCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCchHHHHHHhccCCcCCCCCHHHHHHHHHHHcC
Confidence            22469999999887665       2589999999999988743110 00000 000111123346889999999999997


Q ss_pred             CCC-CccCcEEEEecCC
Q 016901          298 NRS-LSYCKVVEVIAET  313 (380)
Q Consensus       298 ~~~-~~~~~~~ni~~~~  313 (380)
                      +.. ...+.++.+.++.
T Consensus       216 ~~~~~~~g~~~~~~gg~  232 (235)
T PRK06550        216 GKADYMQGTIVPIDGGW  232 (235)
T ss_pred             hhhccCCCcEEEECCce
Confidence            543 3457777776653

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.82  E-value=3.3e-18  Score=158.49  Aligned_cols=197  Identities=17%  Similarity=0.139  Sum_probs=142.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ++++++||||+|+||.+++++|+++|++|++++|++++.+.+..++. .             ..++.++.+|++|.+++.
T Consensus         4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~-------------~~~~~~~~~D~~d~~~~~   69 (263)
T PRK09072          4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLP-Y-------------PGRHRWVVADLTSEAGRE   69 (263)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHh-c-------------CCceEEEEccCCCHHHHH
Confidence            56789999999999999999999999999999999877766554431 1             157889999999998877


Q ss_pred             HHh------cCCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHHHH----cCCCEEEEEccCCCCCCCCch
Q 016901          159 PAL------GNASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFGFPA  222 (380)
Q Consensus       159 ~a~------~~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~~~----~~v~r~V~~SS~~~~~~~~~~  222 (380)
                      +++      +.+|+||||||.......      +....+++|+.|+.++++++..    .+.+++|++||...... .  
T Consensus        70 ~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-~--  146 (263)
T PRK09072         70 AVLARAREMGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIG-Y--  146 (263)
T ss_pred             HHHHHHHhcCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcC-C--
Confidence            665      468999999986532211      2233467999999998888753    34568999988654221 1  


Q ss_pred             hhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHHH
Q 016901          223 AILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACM  295 (380)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~  295 (380)
                         .....|+.+|.+.+.+++       ..|++++++.||.+.++......  . ..  .........+++|+|+.++.+
T Consensus       147 ---~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~--~-~~--~~~~~~~~~~~~~va~~i~~~  218 (263)
T PRK09072        147 ---PGYASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAV--Q-AL--NRALGNAMDDPEDVAAAVLQA  218 (263)
T ss_pred             ---CCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchhhhc--c-cc--cccccCCCCCHHHHHHHHHHH
Confidence               123469999999876654       26899999999999766321100  0 00  001112357899999999999


Q ss_pred             HhCCC
Q 016901          296 AKNRS  300 (380)
Q Consensus       296 l~~~~  300 (380)
                      +++..
T Consensus       219 ~~~~~  223 (263)
T PRK09072        219 IEKER  223 (263)
T ss_pred             HhCCC
Confidence            98765

>PRK07069 short chain dehydrogenase; Validated

Probab=99.82  E-value=1.6e-18  Score=159.13  Aligned_cols=214  Identities=13%  Similarity=0.088  Sum_probs=144.9

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC-chhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRS-VQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        82 ~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      +++||||+|+||+++++.|+++|++|+++.|+ .+..+.+.+.+....           ....+.++++|++|.+++.++
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~D~~~~~~~~~~   69 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAH-----------GEGVAFAAVQDVTDEAQWQAL   69 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcC-----------CCceEEEEEeecCCHHHHHHH
Confidence            38999999999999999999999999999998 555555544332210           002345688999999887766


Q ss_pred             h-------cCCCEEEEccccCccccC------CCCCcchhhHH----HHHHHHHHHHHcCCCEEEEEccCCCCCCCCchh
Q 016901          161 L-------GNASVVICCIGASEKEVF------DITGPYRIDFQ----ATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAA  223 (380)
Q Consensus       161 ~-------~~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~----g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~~~  223 (380)
                      +       +++|+||||||.......      +....+++|+.    +++++++++++.+.++||++||.......    
T Consensus        70 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~----  145 (251)
T PRK07069         70 LAQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAE----  145 (251)
T ss_pred             HHHHHHHcCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCC----
Confidence            5       468999999986543221      22334667877    67788888887778899999997653321    


Q ss_pred             hhchhhHHHHHHHHHHHHHHH---------CCCCEEEEecCcccCCCccccc-----ccceeeccCCcccCCCCCHHHHH
Q 016901          224 ILNLFWGVLLWKRKAEEALIA---------SGLPYTIVRPGGMERPTDAYKE-----THNITLSQEDTLFGGQVSNLQVA  289 (380)
Q Consensus       224 ~~~~~~~Y~~sK~~~E~~l~~---------~g~~~~ivRpg~v~gp~~~~~~-----~~~~~~~~~~~~~~~~i~~~DvA  289 (380)
                        .....|+.+|...+.+++.         .+++++.|+||++.+|......     .............+.+.+++|+|
T Consensus       146 --~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va  223 (251)
T PRK07069        146 --PDYTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPDDVA  223 (251)
T ss_pred             --CCCchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCCCCCCcCHHHHH
Confidence              2234699999998877652         2488999999999988532100     00000001111223457899999


Q ss_pred             HHHHHHHhCCC-CccCcEEEEecC
Q 016901          290 ELLACMAKNRS-LSYCKVVEVIAE  312 (380)
Q Consensus       290 ~~i~~~l~~~~-~~~~~~~ni~~~  312 (380)
                      ++++.++.++. ...|+.+.+.++
T Consensus       224 ~~~~~l~~~~~~~~~g~~i~~~~g  247 (251)
T PRK07069        224 HAVLYLASDESRFVTGAELVIDGG  247 (251)
T ss_pred             HHHHHHcCccccCccCCEEEECCC
Confidence            99999876542 235566555444

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.82  E-value=1.3e-18  Score=161.69  Aligned_cols=219  Identities=25%  Similarity=0.241  Sum_probs=166.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      |+||||||||++|++++++|+++|++|++++|++++...+.                    ..+++..+|+.++.++..+
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~--------------------~~v~~~~~d~~~~~~l~~a   60 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA--------------------GGVEVVLGDLRDPKSLVAG   60 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc--------------------CCcEEEEeccCCHhHHHHH
Confidence            47999999999999999999999999999999998877642                    5799999999999999999


Q ss_pred             hcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCCchhhhchhhHHHHHHHHHHH
Q 016901          161 LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEE  240 (380)
Q Consensus       161 ~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~  240 (380)
                      +.++|.++++.+... ...   ...........+..+++. .++++++++|.++...        .....|..+|...|.
T Consensus        61 ~~G~~~~~~i~~~~~-~~~---~~~~~~~~~~~~~a~~a~-~~~~~~~~~s~~~~~~--------~~~~~~~~~~~~~e~  127 (275)
T COG0702          61 AKGVDGVLLISGLLD-GSD---AFRAVQVTAVVRAAEAAG-AGVKHGVSLSVLGADA--------ASPSALARAKAAVEA  127 (275)
T ss_pred             hccccEEEEEecccc-ccc---chhHHHHHHHHHHHHHhc-CCceEEEEeccCCCCC--------CCccHHHHHHHHHHH
Confidence            999999999987543 111   123344455555555544 4578999999988743        122469999999999


Q ss_pred             HHHHCCCCEEEEecCccc-CCCcccc---cccceeeccCCcccCCCCCHHHHHHHHHHHHhCCCCccCcEEEEecCCCCC
Q 016901          241 ALIASGLPYTIVRPGGME-RPTDAYK---ETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAP  316 (380)
Q Consensus       241 ~l~~~g~~~~ivRpg~v~-gp~~~~~---~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~~~~~~~~~ni~~~~~~s  316 (380)
                      .+++.|++++++|+..+| +......   ................++..+|++.++..++..+. ..+++|++.+++..+
T Consensus       128 ~l~~sg~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~a~~~~~~l~~~~-~~~~~~~l~g~~~~~  206 (275)
T COG0702         128 ALRSSGIPYTTLRRAAFYLGAGAAFIEAAEAAGLPVIPRGIGRLSPIAVDDVAEALAAALDAPA-TAGRTYELAGPEALT  206 (275)
T ss_pred             HHHhcCCCeEEEecCeeeeccchhHHHHHHhhCCceecCCCCceeeeEHHHHHHHHHHHhcCCc-ccCcEEEccCCceec
Confidence            999999999999965554 4433211   11111111111112257999999999999999887 679999999999888


Q ss_pred             cchHHHHHHhcCCCCCC
Q 016901          317 LTPMEELLAKIPSQRAE  333 (380)
Q Consensus       317 ~~~~~e~~~~~~~~~~~  333 (380)
                      ..++.+.+....++...
T Consensus       207 ~~~~~~~l~~~~gr~~~  223 (275)
T COG0702         207 LAELASGLDYTIGRPVG  223 (275)
T ss_pred             HHHHHHHHHHHhCCcce
Confidence            99999999988876543

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.82  E-value=9.9e-19  Score=163.28  Aligned_cols=218  Identities=15%  Similarity=0.159  Sum_probs=148.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      +|+++|||| |+||++++++|+ +|++|++++|+.++.++..+.++..+             .++.++.+|++|.+++.+
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~-------------~~~~~~~~Dv~d~~~i~~   66 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAG-------------FDVSTQEVDVSSRESVKA   66 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcC-------------CeEEEEEeecCCHHHHHH
Confidence            568999998 799999999996 89999999999877666555443211             468889999999988877


Q ss_pred             Hh------cCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHc--CCCEEEEEccCCCCCCCC-----------
Q 016901          160 AL------GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGF-----------  220 (380)
Q Consensus       160 a~------~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~--~v~r~V~~SS~~~~~~~~-----------  220 (380)
                      ++      +.+|+||||||... ...++...+++|+.|+.++++++...  .-+++|++||........           
T Consensus        67 ~~~~~~~~g~id~li~nAG~~~-~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~  145 (275)
T PRK06940         67 LAATAQTLGPVTGLVHTAGVSP-SQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALAT  145 (275)
T ss_pred             HHHHHHhcCCCCEEEECCCcCC-chhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhccccc
Confidence            76      35899999999652 22345666899999999999887542  113567777764422110           


Q ss_pred             -------------chhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccc--ccc--cceeeccCC
Q 016901          221 -------------PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAY--KET--HNITLSQED  276 (380)
Q Consensus       221 -------------~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~--~~~--~~~~~~~~~  276 (380)
                                   +.........|+.+|++.+.+.+       ..|++++.|.||++.++....  ...  .........
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~  225 (275)
T PRK06940        146 TPTEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAK  225 (275)
T ss_pred             cccccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhh
Confidence                         00000134579999999887765       268999999999998874211  000  000000011


Q ss_pred             cccCCCCCHHHHHHHHHHHHhCC-CCccCcEEEEecCC
Q 016901          277 TLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET  313 (380)
Q Consensus       277 ~~~~~~i~~~DvA~~i~~~l~~~-~~~~~~~~ni~~~~  313 (380)
                      ...+.+..++|+|+++..++.+. ....|..+.+-++.
T Consensus       226 ~p~~r~~~peeia~~~~fL~s~~~~~itG~~i~vdgg~  263 (275)
T PRK06940        226 SPAGRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGGA  263 (275)
T ss_pred             CCcccCCCHHHHHHHHHHHcCcccCcccCceEEEcCCe
Confidence            12345689999999999998653 33467777766653

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.82  E-value=1e-18  Score=161.20  Aligned_cols=212  Identities=14%  Similarity=0.061  Sum_probs=143.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++++|+||||+|+||.+++++|+++|++|++++|+..+.+...+.+                  ...++++|++|.+++
T Consensus         5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~------------------~~~~~~~D~~~~~~~   66 (255)
T PRK06057          5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEV------------------GGLFVPTDVTDEDAV   66 (255)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc------------------CCcEEEeeCCCHHHH
Confidence            46789999999999999999999999999999999876655443211                  125788999999888


Q ss_pred             HHHhc-------CCCEEEEccccCccc--c------CCCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCC
Q 016901          158 EPALG-------NASVVICCIGASEKE--V------FDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKF  218 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~~~--~------~~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~  218 (380)
                      +++++       ++|+||||||.....  .      ..+...+++|+.|+.++++.+.    +.+.+++|++||......
T Consensus        67 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g  146 (255)
T PRK06057         67 NALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMG  146 (255)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccC
Confidence            87764       589999999864321  1      1123447789999887776653    455668999998643211


Q ss_pred             CCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccc-cceee--ccCCcccCCCCCHHHH
Q 016901          219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-HNITL--SQEDTLFGGQVSNLQV  288 (380)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~-~~~~~--~~~~~~~~~~i~~~Dv  288 (380)
                      . +    .....|+.+|++.+.+.+       ..|+++++|+||++.+|....... .....  .......+.+.+++|+
T Consensus       147 ~-~----~~~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (255)
T PRK06057        147 S-A----TSQISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAARRLVHVPMGRFAEPEEI  221 (255)
T ss_pred             C-C----CCCcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHHHHHhcCCCCCCcCHHHH
Confidence            1 1    123469999987766554       368999999999998874321100 00000  0001112356889999


Q ss_pred             HHHHHHHHhCCC-CccCcEEEEecC
Q 016901          289 AELLACMAKNRS-LSYCKVVEVIAE  312 (380)
Q Consensus       289 A~~i~~~l~~~~-~~~~~~~ni~~~  312 (380)
                      |+++..++.+.. ...+..+.+.++
T Consensus       222 a~~~~~l~~~~~~~~~g~~~~~~~g  246 (255)
T PRK06057        222 AAAVAFLASDDASFITASTFLVDGG  246 (255)
T ss_pred             HHHHHHHhCccccCccCcEEEECCC
Confidence            999998887543 234666666554

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.82  E-value=3e-18  Score=159.86  Aligned_cols=199  Identities=10%  Similarity=0.050  Sum_probs=139.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhH-------HHHHHHHHhhhhcccccccCCCCCCceEEEEcC
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRA-------ENLVQSVKQMKLDGELANKGIQPVEMLELVECD  150 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  150 (380)
                      +.+++++||||+|+||+++++.|+++|++|+++.|+.++.       .+..+.+...             ..++.++.+|
T Consensus         4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~-------------~~~~~~~~~D   70 (273)
T PRK08278          4 LSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAA-------------GGQALPLVGD   70 (273)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhc-------------CCceEEEEec
Confidence            4568999999999999999999999999999999986532       2222222211             1568899999


Q ss_pred             CCChhcHHHHhc-------CCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHHHH----cCCCEEEEEccC
Q 016901          151 LEKRVQIEPALG-------NASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSL  213 (380)
Q Consensus       151 l~d~~~~~~a~~-------~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~~~----~~v~r~V~~SS~  213 (380)
                      ++|.+++.++++       .+|+||||||.......      +++..+++|+.++.++++++..    .+-.++|++||.
T Consensus        71 ~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~  150 (273)
T PRK08278         71 VRDEDQVAAAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPP  150 (273)
T ss_pred             CCCHHHHHHHHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCc
Confidence            999988877764       68999999986432211      2233477999999999998853    334589999986


Q ss_pred             CCCCCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCc-ccCCCcccccccceeeccCCcccCCCCCH
Q 016901          214 GTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGG-MERPTDAYKETHNITLSQEDTLFGGQVSN  285 (380)
Q Consensus       214 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~-v~gp~~~~~~~~~~~~~~~~~~~~~~i~~  285 (380)
                      .....   . .......|+.+|.++|.+++       .+|++++.|.||. +..+....     .  .........+..+
T Consensus       151 ~~~~~---~-~~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~-----~--~~~~~~~~~~~~p  219 (273)
T PRK08278        151 LNLDP---K-WFAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRN-----L--LGGDEAMRRSRTP  219 (273)
T ss_pred             hhccc---c-ccCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHh-----c--ccccccccccCCH
Confidence            43211   0 01334579999999998876       2689999999994 54442110     0  0111122346799


Q ss_pred             HHHHHHHHHHHhCCC
Q 016901          286 LQVAELLACMAKNRS  300 (380)
Q Consensus       286 ~DvA~~i~~~l~~~~  300 (380)
                      +|+|++++.++....
T Consensus       220 ~~va~~~~~l~~~~~  234 (273)
T PRK08278        220 EIMADAAYEILSRPA  234 (273)
T ss_pred             HHHHHHHHHHhcCcc
Confidence            999999999987654

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.81  E-value=1.2e-18  Score=158.73  Aligned_cols=210  Identities=11%  Similarity=0.088  Sum_probs=145.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      .+++|+||||+|+||.++++.|+++|++|++++|++++.+.+...+...              .+++++.+|++|.++++
T Consensus         4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--------------~~~~~~~~Dl~~~~~~~   69 (238)
T PRK05786          4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKY--------------GNIHYVVGDVSSTESAR   69 (238)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--------------CCeEEEECCCCCHHHHH
Confidence            5689999999999999999999999999999999987766554333211              36889999999998887


Q ss_pred             HHh-------cCCCEEEEccccCccccC----CCCCcchhhHHHHHHHHHHHHHc--CCCEEEEEccCCCCCCCCchhhh
Q 016901          159 PAL-------GNASVVICCIGASEKEVF----DITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFPAAIL  225 (380)
Q Consensus       159 ~a~-------~~~d~Vi~~Ag~~~~~~~----~~~~~~~~nv~g~~~ll~a~~~~--~v~r~V~~SS~~~~~~~~~~~~~  225 (380)
                      +++       +++|.+||++|.......    +....+++|+.+...+++.+...  .-++||++||.+.....     .
T Consensus        70 ~~~~~~~~~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~-----~  144 (238)
T PRK05786         70 NVIEKAAKVLNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKA-----S  144 (238)
T ss_pred             HHHHHHHHHhCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcccC-----C
Confidence            655       357999999985432111    12233678888887777776542  12579999987542111     1


Q ss_pred             chhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHHHHhC
Q 016901          226 NLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKN  298 (380)
Q Consensus       226 ~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~  298 (380)
                      .....|+.+|...+.+++       ..|+++++||||+++++.... .  ...  .........++.+|++++++.++..
T Consensus       145 ~~~~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~-~--~~~--~~~~~~~~~~~~~~va~~~~~~~~~  219 (238)
T PRK05786        145 PDQLSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPE-R--NWK--KLRKLGDDMAPPEDFAKVIIWLLTD  219 (238)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCch-h--hhh--hhccccCCCCCHHHHHHHHHHHhcc
Confidence            233569999998886654       368999999999999873210 0  000  0001111358999999999999976


Q ss_pred             CCC-ccCcEEEEecC
Q 016901          299 RSL-SYCKVVEVIAE  312 (380)
Q Consensus       299 ~~~-~~~~~~ni~~~  312 (380)
                      +.. ..+..+.+.++
T Consensus       220 ~~~~~~g~~~~~~~~  234 (238)
T PRK05786        220 EADWVDGVVIPVDGG  234 (238)
T ss_pred             cccCccCCEEEECCc
Confidence            442 34666666443

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.81  E-value=7.9e-19  Score=162.62  Aligned_cols=214  Identities=16%  Similarity=0.075  Sum_probs=148.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++++++||||+|+||++++++|+++|++|+++.|+.++.+++.+..                ..++.++++|++|.+++
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~----------------~~~~~~~~~D~~~~~~~   66 (262)
T TIGR03325         3 LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAH----------------GDAVVGVEGDVRSLDDH   66 (262)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhc----------------CCceEEEEeccCCHHHH
Confidence            35789999999999999999999999999999999887665543210                14688899999998877


Q ss_pred             HHHh-------cCCCEEEEccccCcc--cc---------CCCCCcchhhHHHHHHHHHHHHHc---CCCEEEEEccCCCC
Q 016901          158 EPAL-------GNASVVICCIGASEK--EV---------FDITGPYRIDFQATKNLVDAATIA---KVNHFIMVSSLGTN  216 (380)
Q Consensus       158 ~~a~-------~~~d~Vi~~Ag~~~~--~~---------~~~~~~~~~nv~g~~~ll~a~~~~---~v~r~V~~SS~~~~  216 (380)
                      .+++       +.+|++|||||....  ..         .++...+++|+.++.++++++...   .-+++|++||....
T Consensus        67 ~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~  146 (262)
T TIGR03325        67 KEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGF  146 (262)
T ss_pred             HHHHHHHHHHhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEecccee
Confidence            7665       468999999985321  10         023456889999999999888542   12578888886543


Q ss_pred             CCCCchhhhchhhHHHHHHHHHHHHHHH------CCCCEEEEecCcccCCCcccc----ccc---ceeec---cCCcccC
Q 016901          217 KFGFPAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYK----ETH---NITLS---QEDTLFG  280 (380)
Q Consensus       217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~~------~g~~~~ivRpg~v~gp~~~~~----~~~---~~~~~---~~~~~~~  280 (380)
                      ...      .....|+.+|.+.+.+++.      ..++++.|.||++.++.....    ...   .....   ......+
T Consensus       147 ~~~------~~~~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~  220 (262)
T TIGR03325       147 YPN------GGGPLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPIG  220 (262)
T ss_pred             cCC------CCCchhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCCccccccccccccccccchhhhhhhcCCCC
Confidence            211      2234699999999988752      248999999999987632110    000   00000   0111234


Q ss_pred             CCCCHHHHHHHHHHHHhCCC--CccCcEEEEecCC
Q 016901          281 GQVSNLQVAELLACMAKNRS--LSYCKVVEVIAET  313 (380)
Q Consensus       281 ~~i~~~DvA~~i~~~l~~~~--~~~~~~~ni~~~~  313 (380)
                      .+..++|+|++++.++.+..  ...|.++.+.++.
T Consensus       221 r~~~p~eva~~~~~l~s~~~~~~~tG~~i~vdgg~  255 (262)
T TIGR03325       221 RMPDAEEYTGAYVFFATRGDTVPATGAVLNYDGGM  255 (262)
T ss_pred             CCCChHHhhhheeeeecCCCcccccceEEEecCCe
Confidence            56789999999999887632  2467777776653

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.81  E-value=1.6e-18  Score=158.17  Aligned_cols=204  Identities=16%  Similarity=0.123  Sum_probs=141.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCCh--h
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR--V  155 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~--~  155 (380)
                      +.+++++||||+|+||+++++.|+++|++|++++|++++.+...+.+...+            ...+.++.+|+.|.  +
T Consensus         4 l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~------------~~~~~~~~~D~~~~~~~   71 (239)
T PRK08703          4 LSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAG------------HPEPFAIRFDLMSAEEK   71 (239)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcC------------CCCcceEEeeecccchH
Confidence            466899999999999999999999999999999999887766655443211            13567788999753  3


Q ss_pred             cHHHH-------h-cCCCEEEEccccCcc-cc------CCCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCC
Q 016901          156 QIEPA-------L-GNASVVICCIGASEK-EV------FDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTN  216 (380)
Q Consensus       156 ~~~~a-------~-~~~d~Vi~~Ag~~~~-~~------~~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~  216 (380)
                      ++.++       + ..+|+||||||.... ..      .++...+++|+.|+.++++++.    +.+..++|++||....
T Consensus        72 ~~~~~~~~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~  151 (239)
T PRK08703         72 EFEQFAATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGE  151 (239)
T ss_pred             HHHHHHHHHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccc
Confidence            44433       2 568999999995421 11      1222347899999888887764    3445699999996543


Q ss_pred             CCCCchhhhchhhHHHHHHHHHHHHHHH-------C-CCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHH
Q 016901          217 KFGFPAAILNLFWGVLLWKRKAEEALIA-------S-GLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQV  288 (380)
Q Consensus       217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~-g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~Dv  288 (380)
                      ..      ......|+.+|++.+.+++.       . ++++++|+||+|++|....     .. ..  .....+...+|+
T Consensus       152 ~~------~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~-----~~-~~--~~~~~~~~~~~~  217 (239)
T PRK08703        152 TP------KAYWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIK-----SH-PG--EAKSERKSYGDV  217 (239)
T ss_pred             cC------CCCccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccc-----cC-CC--CCccccCCHHHH
Confidence            21      12334699999999988752       2 6999999999999884311     00 01  112246799999


Q ss_pred             HHHHHHHHhCC-CCccCcEE
Q 016901          289 AELLACMAKNR-SLSYCKVV  307 (380)
Q Consensus       289 A~~i~~~l~~~-~~~~~~~~  307 (380)
                      +..+..++... ....|+++
T Consensus       218 ~~~~~~~~~~~~~~~~g~~~  237 (239)
T PRK08703        218 LPAFVWWASAESKGRSGEIV  237 (239)
T ss_pred             HHHHHHHhCccccCcCCeEe
Confidence            99999999742 22344443

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.81  E-value=3.7e-18  Score=159.02  Aligned_cols=202  Identities=17%  Similarity=0.145  Sum_probs=139.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      |+++||||+|+||.++++.|+++|++|+++.|+.++.+...+.+...+            ...+.++.+|++|.+++.++
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~------------~~~~~~~~~D~~~~~~~~~~   68 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALG------------GTVPEHRALDISDYDAVAAF   68 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------------CCcceEEEeeCCCHHHHHHH
Confidence            479999999999999999999999999999998877665554443221            12355678999998877665


Q ss_pred             h-------cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHH----Hc-CCCEEEEEccCCCCCCCCch
Q 016901          161 L-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IA-KVNHFIMVSSLGTNKFGFPA  222 (380)
Q Consensus       161 ~-------~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~----~~-~v~r~V~~SS~~~~~~~~~~  222 (380)
                      +       +++|+||||+|......      .++...+++|+.++.++++++.    +. ..++||++||...... .  
T Consensus        69 ~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~-~--  145 (272)
T PRK07832         69 AADIHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVA-L--  145 (272)
T ss_pred             HHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCC-C--
Confidence            5       35899999998643211      1223447899999999998864    22 2468999999754221 1  


Q ss_pred             hhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccc-----eeec-cCCcccCCCCCHHHHH
Q 016901          223 AILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHN-----ITLS-QEDTLFGGQVSNLQVA  289 (380)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~-----~~~~-~~~~~~~~~i~~~DvA  289 (380)
                         .....|+.+|.+.+.+.+       ..|+++++|+||.+.+|.........     .... ......+..++++|+|
T Consensus       146 ---~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA  222 (272)
T PRK07832        146 ---PWHAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVDRFRGHAVTPEKAA  222 (272)
T ss_pred             ---CCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHHhcccCCCCHHHHH
Confidence               223469999998776653       37899999999999887432110000     0000 0011123468999999


Q ss_pred             HHHHHHHhCCC
Q 016901          290 ELLACMAKNRS  300 (380)
Q Consensus       290 ~~i~~~l~~~~  300 (380)
                      +.++.++.++.
T Consensus       223 ~~~~~~~~~~~  233 (272)
T PRK07832        223 EKILAGVEKNR  233 (272)
T ss_pred             HHHHHHHhcCC
Confidence            99999997544

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.81  E-value=1.4e-18  Score=160.10  Aligned_cols=213  Identities=13%  Similarity=0.074  Sum_probs=146.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +.+++++||||+|+||++++++|+++|++|++++|+..  .+..+.+...+             .++.++++|++|.+++
T Consensus         8 l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~~~~~~~~~~-------------~~~~~~~~Dl~~~~~~   72 (253)
T PRK08993          8 LEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTALG-------------RRFLSLTADLRKIDGI   72 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch--HHHHHHHHhcC-------------CeEEEEECCCCCHHHH
Confidence            46789999999999999999999999999998877542  22222222211             4678899999998888


Q ss_pred             HHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHHH----cC-CCEEEEEccCCCCCCC
Q 016901          158 EPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATI----AK-VNHFIMVSSLGTNKFG  219 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~~----~~-v~r~V~~SS~~~~~~~  219 (380)
                      +++++       ++|+||||||......      .++...+++|+.++.++++++..    .+ -+++|++||.......
T Consensus        73 ~~~~~~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~  152 (253)
T PRK08993         73 PALLERAVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGG  152 (253)
T ss_pred             HHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCC
Confidence            77763       6899999999643221      23445588999999988887643    23 2589999997653211


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccc-cc--eeeccCCcccCCCCCHHHHH
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-HN--ITLSQEDTLFGGQVSNLQVA  289 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~-~~--~~~~~~~~~~~~~i~~~DvA  289 (380)
                            .....|+.+|.+.+.+.+       ..|++++.|+||++..+....... ..  ..... ....+.+..++|+|
T Consensus       153 ------~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~-~~p~~r~~~p~eva  225 (253)
T PRK08993        153 ------IRVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILD-RIPAGRWGLPSDLM  225 (253)
T ss_pred             ------CCCcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccchHHHHHHHh-cCCCCCCcCHHHHH
Confidence                  122369999999987765       268999999999998764211100 00  00111 11134578899999


Q ss_pred             HHHHHHHhCCC-CccCcEEEEecC
Q 016901          290 ELLACMAKNRS-LSYCKVVEVIAE  312 (380)
Q Consensus       290 ~~i~~~l~~~~-~~~~~~~ni~~~  312 (380)
                      ..+..++.+.. ...|.++.+.++
T Consensus       226 ~~~~~l~s~~~~~~~G~~~~~dgg  249 (253)
T PRK08993        226 GPVVFLASSASDYINGYTIAVDGG  249 (253)
T ss_pred             HHHHHHhCccccCccCcEEEECCC
Confidence            99999997643 235666665544

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.81  E-value=1.3e-18  Score=159.51  Aligned_cols=204  Identities=17%  Similarity=0.212  Sum_probs=141.4

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh
Q 016901           76 DSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (380)
Q Consensus        76 ~~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~  155 (380)
                      +...+|+|+||||+++||.+++.+|+++|.+++.++|...+++.+.+++++.+        ..   .++.++++|++|.+
T Consensus         8 e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~--------~~---~~v~~~~~Dvs~~~   76 (282)
T KOG1205|consen    8 ERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLG--------SL---EKVLVLQLDVSDEE   76 (282)
T ss_pred             HHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhC--------Cc---CccEEEeCccCCHH
Confidence            45578999999999999999999999999999999999988888866666542        10   26999999999999


Q ss_pred             cHHHHh-------cCCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCC
Q 016901          156 QIEPAL-------GNASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKF  218 (380)
Q Consensus       156 ~~~~a~-------~~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~  218 (380)
                      ++++++       +++|++|||||.......      +....+++|+.|+..+.+++    ++.+-+|||.+||+.....
T Consensus        77 ~~~~~~~~~~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~  156 (282)
T KOG1205|consen   77 SVKKFVEWAIRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMP  156 (282)
T ss_pred             HHHHHHHHHHHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccC
Confidence            888664       689999999997643222      22335899999988877776    4555579999999866332


Q ss_pred             CCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEE-EEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHH
Q 016901          219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYT-IVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAE  290 (380)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~-ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~  290 (380)
                      .      +....|.+||++.+.+..       ..+..+. +|.||+|.......    ......+..........+|++.
T Consensus       157 ~------P~~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i~V~PG~V~Te~~~~----~~~~~~~~~~~~~~~~~~~~~~  226 (282)
T KOG1205|consen  157 L------PFRSIYSASKHALEGFFETLRQELIPLGTIIIILVSPGPIETEFTGK----ELLGEEGKSQQGPFLRTEDVAD  226 (282)
T ss_pred             C------CcccccchHHHHHHHHHHHHHHHhhccCceEEEEEecCceeecccch----hhccccccccccchhhhhhhhh
Confidence            1      112269999999997754       2332222 69999996542110    0000001022223455566655


Q ss_pred             --HHHHHHhCCC
Q 016901          291 --LLACMAKNRS  300 (380)
Q Consensus       291 --~i~~~l~~~~  300 (380)
                        .+..++..+.
T Consensus       227 ~~~~~~~i~~~~  238 (282)
T KOG1205|consen  227 PEAVAYAISTPP  238 (282)
T ss_pred             HHHHHHHHhcCc
Confidence              6766666654

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.81  E-value=1.6e-18  Score=157.93  Aligned_cols=207  Identities=12%  Similarity=0.071  Sum_probs=141.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      +|++|||||+|+||++++++|+++|++|++++|++++..+   .+..               .++.++.+|++|.+++++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~---~~~~---------------~~~~~~~~D~~~~~~~~~   63 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAID---GLRQ---------------AGAQCIQADFSTNAGIMA   63 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHH---HHHH---------------cCCEEEEcCCCCHHHHHH
Confidence            4689999999999999999999999999999998754322   1111               236789999999888776


Q ss_pred             Hh-------cCCCEEEEccccCccc------cCCCCCcchhhHHHHHHHHHHHH----HcC--CCEEEEEccCCCCCCCC
Q 016901          160 AL-------GNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAAT----IAK--VNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       160 a~-------~~~d~Vi~~Ag~~~~~------~~~~~~~~~~nv~g~~~ll~a~~----~~~--v~r~V~~SS~~~~~~~~  220 (380)
                      ++       +++|++|||||.....      ..++...+++|+.++..+.+++.    +.+  .+++|++||....... 
T Consensus        64 ~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~-  142 (236)
T PRK06483         64 FIDELKQHTDGLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGS-  142 (236)
T ss_pred             HHHHHHhhCCCccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCC-
Confidence            65       3589999999864221      11233447889998877666554    333  4589999987542211 


Q ss_pred             chhhhchhhHHHHHHHHHHHHHHH------CCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHH
Q 016901          221 PAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLAC  294 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~------~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~  294 (380)
                           .....|+.+|.+.+.+++.      .+++++.|+||++..+......... .... ....+....++|+|+++..
T Consensus       143 -----~~~~~Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~va~~~~~  215 (236)
T PRK06483        143 -----DKHIAYAASKAALDNMTLSFAAKLAPEVKVNSIAPALILFNEGDDAAYRQ-KALA-KSLLKIEPGEEEIIDLVDY  215 (236)
T ss_pred             -----CCCccHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCceecCCCCCHHHHH-HHhc-cCccccCCCHHHHHHHHHH
Confidence                 2234699999999988762      3699999999998543211000000 0001 1112234689999999999


Q ss_pred             HHhCCCCccCcEEEEecCC
Q 016901          295 MAKNRSLSYCKVVEVIAET  313 (380)
Q Consensus       295 ~l~~~~~~~~~~~ni~~~~  313 (380)
                      ++.+. ...|+++.+.++.
T Consensus       216 l~~~~-~~~G~~i~vdgg~  233 (236)
T PRK06483        216 LLTSC-YVTGRSLPVDGGR  233 (236)
T ss_pred             HhcCC-CcCCcEEEeCccc
Confidence            99743 4677888777664

>PRK06484 short chain dehydrogenase; Validated

Probab=99.81  E-value=8.8e-19  Score=178.06  Aligned_cols=214  Identities=17%  Similarity=0.157  Sum_probs=153.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      ..++++|||||+|+||++++++|+++|++|+++.|+.++.+.+.+.+.                .++..+.+|++|++++
T Consensus       267 ~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------------~~~~~~~~D~~~~~~~  330 (520)
T PRK06484        267 ESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALG----------------DEHLSVQADITDEAAV  330 (520)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC----------------CceeEEEccCCCHHHH
Confidence            367899999999999999999999999999999999877666543221                4567789999999888


Q ss_pred             HHHh-------cCCCEEEEccccCcc-c------cCCCCCcchhhHHHHHHHHHHHHHc--CCCEEEEEccCCCCCCCCc
Q 016901          158 EPAL-------GNASVVICCIGASEK-E------VFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFP  221 (380)
Q Consensus       158 ~~a~-------~~~d~Vi~~Ag~~~~-~------~~~~~~~~~~nv~g~~~ll~a~~~~--~v~r~V~~SS~~~~~~~~~  221 (380)
                      ++++       +.+|+||||||.... .      ..++...+++|+.|+.++++++...  +.++||++||.......  
T Consensus       331 ~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--  408 (520)
T PRK06484        331 ESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLAL--  408 (520)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCC--
Confidence            7766       458999999996421 1      1123445789999999998887653  23589999997653321  


Q ss_pred             hhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccccc-ccc--eeeccCCcccCCCCCHHHHHHH
Q 016901          222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE-THN--ITLSQEDTLFGGQVSNLQVAEL  291 (380)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~-~~~--~~~~~~~~~~~~~i~~~DvA~~  291 (380)
                          .....|+.+|+..+.+.+       ..|++++.|+||++.++...... ...  ..........+....++|+|++
T Consensus       409 ----~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~  484 (520)
T PRK06484        409 ----PPRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPLGRLGDPEEVAEA  484 (520)
T ss_pred             ----CCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence                233579999999997765       26899999999999887421100 000  0000011122345789999999


Q ss_pred             HHHHHhCC-CCccCcEEEEecCC
Q 016901          292 LACMAKNR-SLSYCKVVEVIAET  313 (380)
Q Consensus       292 i~~~l~~~-~~~~~~~~ni~~~~  313 (380)
                      ++.++... ....|+++.+-++.
T Consensus       485 ~~~l~s~~~~~~~G~~i~vdgg~  507 (520)
T PRK06484        485 IAFLASPAASYVNGATLTVDGGW  507 (520)
T ss_pred             HHHHhCccccCccCcEEEECCCc
Confidence            99998754 23467888777663

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.81  E-value=1.8e-18  Score=161.50  Aligned_cols=215  Identities=12%  Similarity=0.089  Sum_probs=145.1

Q ss_pred             CCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           79 DDNLAFVAGAT--GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        79 ~~~~vlVtGat--G~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .+|+++||||+  ++||+++++.|+++|++|++..|+....+.+.+....+         +    .. .++++|++|.++
T Consensus         4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~---------~----~~-~~~~~Dv~d~~~   69 (274)
T PRK08415          4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQEL---------G----SD-YVYELDVSKPEH   69 (274)
T ss_pred             CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhc---------C----Cc-eEEEecCCCHHH
Confidence            56899999997  79999999999999999999999853222222211111         0    23 578999999988


Q ss_pred             HHHHh-------cCCCEEEEccccCcc----c------cCCCCCcchhhHHHHHHHHHHHHHc--CCCEEEEEccCCCCC
Q 016901          157 IEPAL-------GNASVVICCIGASEK----E------VFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNK  217 (380)
Q Consensus       157 ~~~a~-------~~~d~Vi~~Ag~~~~----~------~~~~~~~~~~nv~g~~~ll~a~~~~--~v~r~V~~SS~~~~~  217 (380)
                      +++++       +.+|++|||||....    .      ..++...+++|+.|+..+++++...  .-++||++||.+...
T Consensus        70 v~~~~~~i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~  149 (274)
T PRK08415         70 FKSLAESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVK  149 (274)
T ss_pred             HHHHHHHHHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCcc
Confidence            87665       468999999996421    1      1123445889999988888776532  125899999976532


Q ss_pred             CCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccc-cc-eeeccCCcccCCCCCHHHH
Q 016901          218 FGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-HN-ITLSQEDTLFGGQVSNLQV  288 (380)
Q Consensus       218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~-~~-~~~~~~~~~~~~~i~~~Dv  288 (380)
                      .      ......|+.+|++.+.+.+       .+|++++.|.||++.++....... .. ..........+.+..++|+
T Consensus       150 ~------~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~r~~~pedv  223 (274)
T PRK08415        150 Y------VPHYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDFRMILKWNEINAPLKKNVSIEEV  223 (274)
T ss_pred             C------CCcchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchhhHHhhhhhhhCchhccCCHHHH
Confidence            1      1223469999999987765       378999999999998763211000 00 0000011122346889999


Q ss_pred             HHHHHHHHhCC-CCccCcEEEEecCC
Q 016901          289 AELLACMAKNR-SLSYCKVVEVIAET  313 (380)
Q Consensus       289 A~~i~~~l~~~-~~~~~~~~ni~~~~  313 (380)
                      |++++.++.+. ....++++.+-++.
T Consensus       224 a~~v~fL~s~~~~~itG~~i~vdGG~  249 (274)
T PRK08415        224 GNSGMYLLSDLSSGVTGEIHYVDAGY  249 (274)
T ss_pred             HHHHHHHhhhhhhcccccEEEEcCcc
Confidence            99999999763 33567777777664

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.81  E-value=7.4e-18  Score=155.77  Aligned_cols=218  Identities=15%  Similarity=0.105  Sum_probs=153.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++++++||||+|+||+++++.|+++|++|+++.|+.++.+...+.+...            ...++.++.+|++|.+++
T Consensus         5 ~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~------------~~~~~~~~~~D~~~~~~~   72 (259)
T PRK06125          5 LAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAA------------HGVDVAVHALDLSSPEAR   72 (259)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhh------------cCCceEEEEecCCCHHHH
Confidence            35689999999999999999999999999999999988776665544321            014688899999999888


Q ss_pred             HHHh---cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCCCCchhh
Q 016901          158 EPAL---GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGFPAAI  224 (380)
Q Consensus       158 ~~a~---~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~~~~~~~  224 (380)
                      .+++   +.+|.+|||||......      .++...+++|+.+...+++++    ++.+.+++|++||......      
T Consensus        73 ~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~------  146 (259)
T PRK06125         73 EQLAAEAGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENP------  146 (259)
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCC------
Confidence            7766   46999999998643211      123344788999988887765    4444568999998755321      


Q ss_pred             hchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCccc--cccc--ce------eeccCCcccCCCCCHHH
Q 016901          225 LNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAY--KETH--NI------TLSQEDTLFGGQVSNLQ  287 (380)
Q Consensus       225 ~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~--~~~~--~~------~~~~~~~~~~~~i~~~D  287 (380)
                      ...+..|..+|.+.+.+.+.       .|++++.|+||.+.++....  ....  .+      .........+.+.+++|
T Consensus       147 ~~~~~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (259)
T PRK06125        147 DADYICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLPLGRPATPEE  226 (259)
T ss_pred             CCCchHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhccCCcCCCcCHHH
Confidence            12345689999998877652       68999999999998763110  0000  00      00001112235678999


Q ss_pred             HHHHHHHHHhCCC-CccCcEEEEecCC
Q 016901          288 VAELLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       288 vA~~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      +|++++.++.+.. ...|..+.+.++.
T Consensus       227 va~~~~~l~~~~~~~~~G~~i~vdgg~  253 (259)
T PRK06125        227 VADLVAFLASPRSGYTSGTVVTVDGGI  253 (259)
T ss_pred             HHHHHHHHcCchhccccCceEEecCCe
Confidence            9999999987542 2467788777664

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.81  E-value=4.2e-18  Score=159.98  Aligned_cols=215  Identities=13%  Similarity=0.060  Sum_probs=146.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCc---------hhHHHHHHHHHhhhhcccccccCCCCCCceEEE
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV---------QRAENLVQSVKQMKLDGELANKGIQPVEMLELV  147 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  147 (380)
                      .+++++++||||+++||+++++.|+++|++|+++.|+.         +......+.+...             ..++.++
T Consensus         3 ~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~-------------~~~~~~~   69 (286)
T PRK07791          3 LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAA-------------GGEAVAN   69 (286)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhc-------------CCceEEE
Confidence            35678999999999999999999999999999988765         4444444433321             1467889


Q ss_pred             EcCCCChhcHHHHh-------cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHH----HcC------C
Q 016901          148 ECDLEKRVQIEPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAK------V  204 (380)
Q Consensus       148 ~~Dl~d~~~~~~a~-------~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~----~~~------v  204 (380)
                      .+|++|.+++.+++       +.+|++|||||......      .++...+++|+.|+..+++++.    +.+      .
T Consensus        70 ~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~  149 (286)
T PRK07791         70 GDDIADWDGAANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVD  149 (286)
T ss_pred             eCCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCC
Confidence            99999988877665       46899999999653221      1234458899999888877664    221      2


Q ss_pred             CEEEEEccCCCCCCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCc
Q 016901          205 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDT  277 (380)
Q Consensus       205 ~r~V~~SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~  277 (380)
                      ++||++||.......      .....|+.+|.+.+.+.+       ..|++++.|.|| +..+..... .... ......
T Consensus       150 g~Iv~isS~~~~~~~------~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~~~-~~~~-~~~~~~  220 (286)
T PRK07791        150 ARIINTSSGAGLQGS------VGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTETV-FAEM-MAKPEE  220 (286)
T ss_pred             cEEEEeCchhhCcCC------CCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcchhh-HHHH-HhcCcc
Confidence            489999997553211      223569999999987765       379999999999 543321000 0000 000000


Q ss_pred             ccCCCCCHHHHHHHHHHHHhCC-CCccCcEEEEecCC
Q 016901          278 LFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET  313 (380)
Q Consensus       278 ~~~~~i~~~DvA~~i~~~l~~~-~~~~~~~~ni~~~~  313 (380)
                      .......++|+|++++.++... ....|+++.+-++.
T Consensus       221 ~~~~~~~pedva~~~~~L~s~~~~~itG~~i~vdgG~  257 (286)
T PRK07791        221 GEFDAMAPENVSPLVVWLGSAESRDVTGKVFEVEGGK  257 (286)
T ss_pred             cccCCCCHHHHHHHHHHHhCchhcCCCCcEEEEcCCc
Confidence            0002468999999999998753 33467888777665

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.80  E-value=2e-18  Score=160.02  Aligned_cols=217  Identities=12%  Similarity=0.100  Sum_probs=144.0

Q ss_pred             CCCCCeEEEEcC--CChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCCh
Q 016901           77 SKDDNLAFVAGA--TGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (380)
Q Consensus        77 ~~~~~~vlVtGa--tG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~  154 (380)
                      .+++++++||||  +++||++++++|+++|++|++..|+.. ..+..+.+...             ......+++|++|.
T Consensus         3 ~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~-~~~~~~~~~~~-------------~~~~~~~~~Dv~~~   68 (261)
T PRK08690          3 FLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDK-LEERVRKMAAE-------------LDSELVFRCDVASD   68 (261)
T ss_pred             ccCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHH-HHHHHHHHHhc-------------cCCceEEECCCCCH
Confidence            456789999997  679999999999999999999877632 22222222110             02345789999999


Q ss_pred             hcHHHHh-------cCCCEEEEccccCccc-----c-C-----CCCCcchhhHHHHHHHHHHHHH---cCCCEEEEEccC
Q 016901          155 VQIEPAL-------GNASVVICCIGASEKE-----V-F-----DITGPYRIDFQATKNLVDAATI---AKVNHFIMVSSL  213 (380)
Q Consensus       155 ~~~~~a~-------~~~d~Vi~~Ag~~~~~-----~-~-----~~~~~~~~nv~g~~~ll~a~~~---~~v~r~V~~SS~  213 (380)
                      +++++++       +++|++|||||.....     . .     .+...+++|+.+...+.+++..   ...++||++||.
T Consensus        69 ~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~  148 (261)
T PRK08690         69 DEINQVFADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYL  148 (261)
T ss_pred             HHHHHHHHHHHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEccc
Confidence            8888776       4699999999965321     0 1     1222367888888777766432   122589999997


Q ss_pred             CCCCCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccc-cce-eeccCCcccCCCCC
Q 016901          214 GTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-HNI-TLSQEDTLFGGQVS  284 (380)
Q Consensus       214 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~-~~~-~~~~~~~~~~~~i~  284 (380)
                      +....      ......|+.+|.+.+.+.+       .+|++++.|.||++..+....... ... .........+.+..
T Consensus       149 ~~~~~------~~~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~  222 (261)
T PRK08690        149 GAVRA------IPNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPLRRNVT  222 (261)
T ss_pred             ccccC------CCCcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCchHHHHHHHhhcCCCCCCCC
Confidence            65321      1233469999999987765       378999999999998763210000 000 00011112345678


Q ss_pred             HHHHHHHHHHHHhCC-CCccCcEEEEecCC
Q 016901          285 NLQVAELLACMAKNR-SLSYCKVVEVIAET  313 (380)
Q Consensus       285 ~~DvA~~i~~~l~~~-~~~~~~~~ni~~~~  313 (380)
                      ++|+|+++..++.+. ....|+++.+-++.
T Consensus       223 peevA~~v~~l~s~~~~~~tG~~i~vdgG~  252 (261)
T PRK08690        223 IEEVGNTAAFLLSDLSSGITGEITYVDGGY  252 (261)
T ss_pred             HHHHHHHHHHHhCcccCCcceeEEEEcCCc
Confidence            999999999999864 33467777776654

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.80  E-value=2.2e-18  Score=158.17  Aligned_cols=198  Identities=15%  Similarity=0.109  Sum_probs=140.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCC--Ch
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLE--KR  154 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~--d~  154 (380)
                      ...+++|+||||+|+||.+++++|+++|++|++++|+.++...+.+.+...+            ..++.++.+|++  +.
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~------------~~~~~~~~~d~~~~~~   76 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAG------------GPQPAIIPLDLLTATP   76 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcC------------CCCceEEEecccCCCH
Confidence            3467899999999999999999999999999999999887776665554321            145778888886  44


Q ss_pred             hcHHHH-------hcCCCEEEEccccCccc-------cCCCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCC
Q 016901          155 VQIEPA-------LGNASVVICCIGASEKE-------VFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTN  216 (380)
Q Consensus       155 ~~~~~a-------~~~~d~Vi~~Ag~~~~~-------~~~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~  216 (380)
                      +++.++       +..+|+||||||.....       ...+...+++|+.|+.++++++    .+.+.++||++||....
T Consensus        77 ~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~  156 (247)
T PRK08945         77 QNYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGR  156 (247)
T ss_pred             HHHHHHHHHHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhc
Confidence            444333       35789999999864221       1123344789999988888776    45667899999997543


Q ss_pred             CCCCchhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHH
Q 016901          217 KFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVA  289 (380)
Q Consensus       217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA  289 (380)
                      ...      .....|+.+|.+++.+++.       .++++++++||.+.++....    ..  ...  ....+..++|++
T Consensus       157 ~~~------~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~----~~--~~~--~~~~~~~~~~~~  222 (247)
T PRK08945        157 QGR------ANWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRAS----AF--PGE--DPQKLKTPEDIM  222 (247)
T ss_pred             CCC------CCCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhh----hc--Ccc--cccCCCCHHHHH
Confidence            211      1234699999999987652       57999999999997653210    00  001  123468899999


Q ss_pred             HHHHHHHhCCC
Q 016901          290 ELLACMAKNRS  300 (380)
Q Consensus       290 ~~i~~~l~~~~  300 (380)
                      +++..++.+..
T Consensus       223 ~~~~~~~~~~~  233 (247)
T PRK08945        223 PLYLYLMGDDS  233 (247)
T ss_pred             HHHHHHhCccc
Confidence            99999886543

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.80  E-value=8.7e-18  Score=155.17  Aligned_cols=214  Identities=14%  Similarity=0.125  Sum_probs=143.2

Q ss_pred             CCCCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEeCCc-----------hhHHHHHHHHHhhhhcccccccCCCCCCc
Q 016901           77 SKDDNLAFVAGATG--KVGSRTVRELLKLGFRVRAGVRSV-----------QRAENLVQSVKQMKLDGELANKGIQPVEM  143 (380)
Q Consensus        77 ~~~~~~vlVtGatG--~iG~~lv~~Ll~~G~~V~~l~R~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (380)
                      ..++++++||||+|  +||.+++++|+++|++|++..|..           ....+..+.++..             ..+
T Consensus         3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------g~~   69 (256)
T PRK12859          3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKN-------------GVK   69 (256)
T ss_pred             CcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhc-------------CCe
Confidence            34678999999995  899999999999999998875421           1112222222211             146


Q ss_pred             eEEEEcCCCChhcHHHHh-------cCCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHH----HHHcCCCE
Q 016901          144 LELVECDLEKRVQIEPAL-------GNASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDA----ATIAKVNH  206 (380)
Q Consensus       144 v~~~~~Dl~d~~~~~~a~-------~~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a----~~~~~v~r  206 (380)
                      +.++++|++|.+++.+++       +.+|+||||||.......      +++..+++|+.+...+..+    +++.+.++
T Consensus        70 ~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~  149 (256)
T PRK12859         70 VSSMELDLTQNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGR  149 (256)
T ss_pred             EEEEEcCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeE
Confidence            888999999998887776       358999999986432211      2333478899988777544    44444569


Q ss_pred             EEEEccCCCCCCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCccc
Q 016901          207 FIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLF  279 (380)
Q Consensus       207 ~V~~SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~  279 (380)
                      ||++||......      ......|+.+|.+.+.+.+       ..|++++.|+||++.++.........  .. .....
T Consensus       150 iv~isS~~~~~~------~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~~~~~~--~~-~~~~~  220 (256)
T PRK12859        150 IINMTSGQFQGP------MVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTEEIKQG--LL-PMFPF  220 (256)
T ss_pred             EEEEcccccCCC------CCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCHHHHHH--HH-hcCCC
Confidence            999999765321      1234579999999987754       36899999999999776321100000  00 11112


Q ss_pred             CCCCCHHHHHHHHHHHHhCCC-CccCcEEEEecC
Q 016901          280 GGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE  312 (380)
Q Consensus       280 ~~~i~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~  312 (380)
                      +....++|+|+++..++.... ...|+++.+-++
T Consensus       221 ~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgg  254 (256)
T PRK12859        221 GRIGEPKDAARLIKFLASEEAEWITGQIIHSEGG  254 (256)
T ss_pred             CCCcCHHHHHHHHHHHhCccccCccCcEEEeCCC
Confidence            335689999999999887642 345677766554

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.80  E-value=5.9e-18  Score=156.73  Aligned_cols=218  Identities=18%  Similarity=0.150  Sum_probs=151.0

Q ss_pred             CCCCeEEEEcCCC-hHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           78 KDDNLAFVAGATG-KVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        78 ~~~~~vlVtGatG-~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      +.+++++||||+| +||+++++.|+++|++|++++|+.++.+...+.++...           ...++.++++|++|.++
T Consensus        15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~Dl~~~~~   83 (262)
T PRK07831         15 LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAEL-----------GLGRVEAVVCDVTSEAQ   83 (262)
T ss_pred             cCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhc-----------CCceEEEEEccCCCHHH
Confidence            3578999999997 79999999999999999999998877666555443210           01368889999999988


Q ss_pred             HHHHh-------cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHH----HcC-CCEEEEEccCCCCCC
Q 016901          157 IEPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAK-VNHFIMVSSLGTNKF  218 (380)
Q Consensus       157 ~~~a~-------~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~----~~~-v~r~V~~SS~~~~~~  218 (380)
                      +++++       +.+|+||||||......      .++...+++|+.++..+++++.    +.+ ..++|++||......
T Consensus        84 ~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~  163 (262)
T PRK07831         84 VDALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRA  163 (262)
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCC
Confidence            87766       36899999999642211      1233347789999888877764    333 468999988654321


Q ss_pred             CCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccccc-ccceeeccCCcccCCCCCHHHHHH
Q 016901          219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE-THNITLSQEDTLFGGQVSNLQVAE  290 (380)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~-~~~~~~~~~~~~~~~~i~~~DvA~  290 (380)
                      .      .....|+.+|.+.+.+++       .+|+++++|+||.+.+|...... .............+.+..++|+|+
T Consensus       164 ~------~~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~r~~~p~~va~  237 (262)
T PRK07831        164 Q------HGQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTSAELLDELAAREAFGRAAEPWEVAN  237 (262)
T ss_pred             C------CCCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccCHHHHHHHHhcCCCCCCcCHHHHHH
Confidence            1      233469999999998876       26899999999999987432110 000000011122345678999999


Q ss_pred             HHHHHHhCCC-CccCcEEEEecC
Q 016901          291 LLACMAKNRS-LSYCKVVEVIAE  312 (380)
Q Consensus       291 ~i~~~l~~~~-~~~~~~~ni~~~  312 (380)
                      +++.++.+.. ...|+++.+.++
T Consensus       238 ~~~~l~s~~~~~itG~~i~v~~~  260 (262)
T PRK07831        238 VIAFLASDYSSYLTGEVVSVSSQ  260 (262)
T ss_pred             HHHHHcCchhcCcCCceEEeCCC
Confidence            9999987643 345677766553

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.80  E-value=7.2e-18  Score=156.06  Aligned_cols=217  Identities=14%  Similarity=0.095  Sum_probs=145.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCc-hhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV-QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      +++++++||||+|+||+++++.|+++|++|+++.|+. +......+.++..             ..++.++.+|++|.++
T Consensus         5 ~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~-------------~~~~~~~~~Dl~~~~~   71 (261)
T PRK08936          5 LEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKA-------------GGEAIAVKGDVTVESD   71 (261)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc-------------CCeEEEEEecCCCHHH
Confidence            3678999999999999999999999999999888854 3334444333321             1467889999999988


Q ss_pred             HHHHh-------cCCCEEEEccccCccccC------CCCCcchhhHHHHHHHHH----HHHHcC-CCEEEEEccCCCCCC
Q 016901          157 IEPAL-------GNASVVICCIGASEKEVF------DITGPYRIDFQATKNLVD----AATIAK-VNHFIMVSSLGTNKF  218 (380)
Q Consensus       157 ~~~a~-------~~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~----a~~~~~-v~r~V~~SS~~~~~~  218 (380)
                      +.+++       ..+|+||||||.......      ++...+++|+.++..+++    .+.+.+ .+++|++||......
T Consensus        72 i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~  151 (261)
T PRK08936         72 VVNLIQTAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIP  151 (261)
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCC
Confidence            77765       358999999996432211      223347889888765544    445554 368999999754321


Q ss_pred             CCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccc--cccceeeccCCcccCCCCCHHHHH
Q 016901          219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK--ETHNITLSQEDTLFGGQVSNLQVA  289 (380)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~--~~~~~~~~~~~~~~~~~i~~~DvA  289 (380)
                            ......|+.+|.+.+.+.+       ..|+++++|+||++.+|.....  ..............+....++|++
T Consensus       152 ------~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va  225 (261)
T PRK08936        152 ------WPLFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPKQRADVESMIPMGYIGKPEEIA  225 (261)
T ss_pred             ------CCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHHHHHHHHhcCCCCCCcCHHHHH
Confidence                  1233469999988876654       3689999999999988742110  000000000111234567899999


Q ss_pred             HHHHHHHhCCC-CccCcEEEEecCC
Q 016901          290 ELLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       290 ~~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      +++..++.... ...+..+.+.++.
T Consensus       226 ~~~~~l~s~~~~~~~G~~i~~d~g~  250 (261)
T PRK08936        226 AVAAWLASSEASYVTGITLFADGGM  250 (261)
T ss_pred             HHHHHHcCcccCCccCcEEEECCCc
Confidence            99999987543 2356666665543

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.80  E-value=2.5e-18  Score=155.58  Aligned_cols=193  Identities=12%  Similarity=0.047  Sum_probs=141.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      |+++||||+|+||+++++.|+++|++|+++.|+.++.....+.                  .+++++++|++|.++++++
T Consensus         1 m~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~------------------~~~~~~~~D~~~~~~v~~~   62 (223)
T PRK05884          1 VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKE------------------LDVDAIVCDNTDPASLEEA   62 (223)
T ss_pred             CeEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh------------------ccCcEEecCCCCHHHHHHH
Confidence            3699999999999999999999999999999998766554321                  2366889999999988887


Q ss_pred             hc----CCCEEEEccccCcc-----------ccCCCCCcchhhHHHHHHHHHHHHHc--CCCEEEEEccCCCCCCCCchh
Q 016901          161 LG----NASVVICCIGASEK-----------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFPAA  223 (380)
Q Consensus       161 ~~----~~d~Vi~~Ag~~~~-----------~~~~~~~~~~~nv~g~~~ll~a~~~~--~v~r~V~~SS~~~~~~~~~~~  223 (380)
                      ++    .+|++|||||....           ...++...+++|+.++.++++++...  .-+++|++||...        
T Consensus        63 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~~--------  134 (223)
T PRK05884         63 RGLFPHHLDTIVNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPENP--------  134 (223)
T ss_pred             HHHHhhcCcEEEECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCCC--------
Confidence            74    58999999984210           11223445789999999999887542  2358999998652        


Q ss_pred             hhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHHHH
Q 016901          224 ILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMA  296 (380)
Q Consensus       224 ~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l  296 (380)
                        .....|+.+|++.+.+.+       .+|++++.|.||++..+....     .  .   ..  ..-.++|+|+++..++
T Consensus       135 --~~~~~Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~~-----~--~---~~--p~~~~~~ia~~~~~l~  200 (223)
T PRK05884        135 --PAGSAEAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPGYDG-----L--S---RT--PPPVAAEIARLALFLT  200 (223)
T ss_pred             --CCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchhhhh-----c--c---CC--CCCCHHHHHHHHHHHc
Confidence              112469999999987765       378999999999997663210     0  0   00  1127899999999998


Q ss_pred             hCC-CCccCcEEEEecCC
Q 016901          297 KNR-SLSYCKVVEVIAET  313 (380)
Q Consensus       297 ~~~-~~~~~~~~ni~~~~  313 (380)
                      ... ....|+++.+.++.
T Consensus       201 s~~~~~v~G~~i~vdgg~  218 (223)
T PRK05884        201 TPAARHITGQTLHVSHGA  218 (223)
T ss_pred             CchhhccCCcEEEeCCCe
Confidence            753 33467777776554

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.80  E-value=9e-19  Score=162.50  Aligned_cols=208  Identities=14%  Similarity=0.137  Sum_probs=145.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++++++||||+|+||+++++.|+++|++|+++.|+..+...                      .++.++.+|++|.+++
T Consensus         7 l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~----------------------~~~~~~~~D~~~~~~~   64 (266)
T PRK06171          7 LQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQH----------------------ENYQFVPTDVSSAEEV   64 (266)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcccccc----------------------CceEEEEccCCCHHHH
Confidence            467899999999999999999999999999999988754321                      4688899999999888


Q ss_pred             HHHh-------cCCCEEEEccccCcccc---------------CCCCCcchhhHHHHHHHHHHHHH----cCCCEEEEEc
Q 016901          158 EPAL-------GNASVVICCIGASEKEV---------------FDITGPYRIDFQATKNLVDAATI----AKVNHFIMVS  211 (380)
Q Consensus       158 ~~a~-------~~~d~Vi~~Ag~~~~~~---------------~~~~~~~~~nv~g~~~ll~a~~~----~~v~r~V~~S  211 (380)
                      ++++       +.+|+||||||......               .++...+++|+.++..+++++..    .+..+||++|
T Consensus        65 ~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~is  144 (266)
T PRK06171         65 NHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMS  144 (266)
T ss_pred             HHHHHHHHHHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEc
Confidence            7765       35899999998542210               11233478899999999888753    3446899999


Q ss_pred             cCCCCCCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCccc-CCCcc--ccccc----c-----e--
Q 016901          212 SLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGME-RPTDA--YKETH----N-----I--  270 (380)
Q Consensus       212 S~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~-gp~~~--~~~~~----~-----~--  270 (380)
                      |.......      .....|+.+|.+.+.+++       ..|+++++|+||.+. .+...  +....    .     .  
T Consensus       145 S~~~~~~~------~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~  218 (266)
T PRK06171        145 SEAGLEGS------EGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRA  218 (266)
T ss_pred             cccccCCC------CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHh
Confidence            97653221      223569999999987765       268999999999985 22110  00000    0     0  


Q ss_pred             eecc-CCcccCCCCCHHHHHHHHHHHHhCCC-CccCcEEEEecCC
Q 016901          271 TLSQ-EDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       271 ~~~~-~~~~~~~~i~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      .... .....+....++|+|.++..++.... ...++++++-++.
T Consensus       219 ~~~~~~~~p~~r~~~~~eva~~~~fl~s~~~~~itG~~i~vdgg~  263 (266)
T PRK06171        219 GYTKTSTIPLGRSGKLSEVADLVCYLLSDRASYITGVTTNIAGGK  263 (266)
T ss_pred             hhcccccccCCCCCCHHHhhhheeeeeccccccceeeEEEecCcc
Confidence            0000 01123456789999999999987533 3467777776653

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.80  E-value=5.7e-19  Score=162.26  Aligned_cols=207  Identities=16%  Similarity=0.118  Sum_probs=137.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCch-hHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ-RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      |+++||||+|+||++++++|+++|++|++++|++. ....+.+   .             ...+++++.+|++|.+++++
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~---~-------------~~~~~~~~~~D~~~~~~~~~   65 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAE---Q-------------YNSNLTFHSLDLQDVHELET   65 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHh---c-------------cCCceEEEEecCCCHHHHHH
Confidence            68999999999999999999999999999999873 3222211   1             11568899999999988887


Q ss_pred             HhcC---------C--CEEEEccccCccc--c-----CCCCCcchhhHHHHHHHHHHH----HHc-CCCEEEEEccCCCC
Q 016901          160 ALGN---------A--SVVICCIGASEKE--V-----FDITGPYRIDFQATKNLVDAA----TIA-KVNHFIMVSSLGTN  216 (380)
Q Consensus       160 a~~~---------~--d~Vi~~Ag~~~~~--~-----~~~~~~~~~nv~g~~~ll~a~----~~~-~v~r~V~~SS~~~~  216 (380)
                      +++.         .  +.+|||||.....  .     .++...+++|+.+...+++.+    ++. +.++||++||....
T Consensus        66 ~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~  145 (251)
T PRK06924         66 NFNEILSSIQEDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAK  145 (251)
T ss_pred             HHHHHHHhcCcccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhc
Confidence            7642         1  2799999864221  1     122334677888866655544    333 34689999997653


Q ss_pred             CCCCchhhhchhhHHHHHHHHHHHHHH---------HCCCCEEEEecCcccCCCcccc---ccccee-e--ccCCcccCC
Q 016901          217 KFGFPAAILNLFWGVLLWKRKAEEALI---------ASGLPYTIVRPGGMERPTDAYK---ETHNIT-L--SQEDTLFGG  281 (380)
Q Consensus       217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~---------~~g~~~~ivRpg~v~gp~~~~~---~~~~~~-~--~~~~~~~~~  281 (380)
                      ..      ......|+.+|.+.+.+++         ..+++++.|+||++.++.....   ...... .  .......+.
T Consensus       146 ~~------~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (251)
T PRK06924        146 NP------YFGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLKEEGK  219 (251)
T ss_pred             CC------CCCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHhhcCC
Confidence            22      2334679999999998765         1479999999999977642110   000000 0  000011234


Q ss_pred             CCCHHHHHHHHHHHHhCCCCccCcEEEE
Q 016901          282 QVSNLQVAELLACMAKNRSLSYCKVVEV  309 (380)
Q Consensus       282 ~i~~~DvA~~i~~~l~~~~~~~~~~~ni  309 (380)
                      +.+++|+|+.++.++.+.....|..+.+
T Consensus       220 ~~~~~dva~~~~~l~~~~~~~~G~~~~v  247 (251)
T PRK06924        220 LLSPEYVAKALRNLLETEDFPNGEVIDI  247 (251)
T ss_pred             cCCHHHHHHHHHHHHhcccCCCCCEeeh
Confidence            6899999999999998744445555543

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.80  E-value=3.5e-18  Score=159.37  Aligned_cols=216  Identities=12%  Similarity=0.120  Sum_probs=146.9

Q ss_pred             CCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh
Q 016901           78 KDDNLAFVAGAT--GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (380)
Q Consensus        78 ~~~~~vlVtGat--G~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~  155 (380)
                      +.+++++||||+  ++||.++++.|+++|++|++..|+....+.+.+..+.+              .....+++|++|.+
T Consensus         8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~--------------~~~~~~~~Dl~~~~   73 (272)
T PRK08159          8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAEL--------------GAFVAGHCDVTDEA   73 (272)
T ss_pred             ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhc--------------CCceEEecCCCCHH
Confidence            466899999997  89999999999999999998888642222222211111              23557899999998


Q ss_pred             cHHHHh-------cCCCEEEEccccCccc----------cCCCCCcchhhHHHHHHHHHHHHHc--CCCEEEEEccCCCC
Q 016901          156 QIEPAL-------GNASVVICCIGASEKE----------VFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTN  216 (380)
Q Consensus       156 ~~~~a~-------~~~d~Vi~~Ag~~~~~----------~~~~~~~~~~nv~g~~~ll~a~~~~--~v~r~V~~SS~~~~  216 (380)
                      ++++++       +.+|++|||||.....          ..++...+++|+.++..+++++...  +-+++|++||.+..
T Consensus        74 ~v~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~  153 (272)
T PRK08159         74 SIDAVFETLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAE  153 (272)
T ss_pred             HHHHHHHHHHHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccc
Confidence            888765       4589999999965311          1123445789999999998877542  22589999997653


Q ss_pred             CCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccc-cce-eeccCCcccCCCCCHHH
Q 016901          217 KFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-HNI-TLSQEDTLFGGQVSNLQ  287 (380)
Q Consensus       217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~-~~~-~~~~~~~~~~~~i~~~D  287 (380)
                      ..      ...+..|+.+|++.+.+.+       .+|++++.|.||++.++....... ... .........+.+..++|
T Consensus       154 ~~------~p~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pee  227 (272)
T PRK08159        154 KV------MPHYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIEE  227 (272)
T ss_pred             cC------CCcchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcchHHHHHHHhCCcccccCCHHH
Confidence            21      1234569999999987765       378999999999997652211000 000 00001112234678999


Q ss_pred             HHHHHHHHHhCCC-CccCcEEEEecCC
Q 016901          288 VAELLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       288 vA~~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      +|++++.++.+.. ...|.++.+-++.
T Consensus       228 vA~~~~~L~s~~~~~itG~~i~vdgG~  254 (272)
T PRK08159        228 VGDSALYLLSDLSRGVTGEVHHVDSGY  254 (272)
T ss_pred             HHHHHHHHhCccccCccceEEEECCCc
Confidence            9999999997543 3467788777764

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.80  E-value=3.5e-18  Score=158.02  Aligned_cols=215  Identities=12%  Similarity=0.114  Sum_probs=145.1

Q ss_pred             CCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh
Q 016901           78 KDDNLAFVAGAT--GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (380)
Q Consensus        78 ~~~~~vlVtGat--G~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~  155 (380)
                      +++|+++||||+  ++||++++++|+++|++|++..|+....+.+.+..+..              ..+.++.+|++|.+
T Consensus         8 ~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~--------------~~~~~~~~D~~~~~   73 (258)
T PRK07533          8 LAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEEL--------------DAPIFLPLDVREPG   73 (258)
T ss_pred             cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhh--------------ccceEEecCcCCHH
Confidence            467899999998  59999999999999999999999864332222211111              23567899999998


Q ss_pred             cHHHHh-------cCCCEEEEccccCcc----------ccCCCCCcchhhHHHHHHHHHHHHHc--CCCEEEEEccCCCC
Q 016901          156 QIEPAL-------GNASVVICCIGASEK----------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTN  216 (380)
Q Consensus       156 ~~~~a~-------~~~d~Vi~~Ag~~~~----------~~~~~~~~~~~nv~g~~~ll~a~~~~--~v~r~V~~SS~~~~  216 (380)
                      ++++++       +.+|++|||||....          +..++...+++|+.+...+++++...  .-+++|++||.+..
T Consensus        74 ~v~~~~~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~  153 (258)
T PRK07533         74 QLEAVFARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAE  153 (258)
T ss_pred             HHHHHHHHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccccc
Confidence            887665       468999999986431          11123445789999999888876432  12589999997653


Q ss_pred             CCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccc-cce-eeccCCcccCCCCCHHH
Q 016901          217 KFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-HNI-TLSQEDTLFGGQVSNLQ  287 (380)
Q Consensus       217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~-~~~-~~~~~~~~~~~~i~~~D  287 (380)
                      ..      ......|+.+|.+.+.+.+       .+|++++.|.||.+.++....... ... .........+....++|
T Consensus       154 ~~------~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~d  227 (258)
T PRK07533        154 KV------VENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDALLEDAAERAPLRRLVDIDD  227 (258)
T ss_pred             cC------CccchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcHHHHHHHHhcCCcCCCCCHHH
Confidence            21      1234569999999987765       378999999999997763210000 000 00001112234678999


Q ss_pred             HHHHHHHHHhCC-CCccCcEEEEecC
Q 016901          288 VAELLACMAKNR-SLSYCKVVEVIAE  312 (380)
Q Consensus       288 vA~~i~~~l~~~-~~~~~~~~ni~~~  312 (380)
                      +|.+++.++.+. ....|+.+.+-++
T Consensus       228 va~~~~~L~s~~~~~itG~~i~vdgg  253 (258)
T PRK07533        228 VGAVAAFLASDAARRLTGNTLYIDGG  253 (258)
T ss_pred             HHHHHHHHhChhhccccCcEEeeCCc
Confidence            999999998753 3345777766554

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.80  E-value=6.2e-18  Score=175.94  Aligned_cols=220  Identities=15%  Similarity=0.155  Sum_probs=151.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +.+++||||||+|+||++++++|+++|++|++++|+.+..+...+.+....           ...++..+++|++|.+++
T Consensus       412 l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~-----------~~~~~~~v~~Dvtd~~~v  480 (676)
T TIGR02632       412 LARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQF-----------GAGRAVALKMDVTDEQAV  480 (676)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhc-----------CCCcEEEEECCCCCHHHH
Confidence            467899999999999999999999999999999999877666554433110           013577899999999888


Q ss_pred             HHHhc-------CCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHH----HHcC-CCEEEEEccCCCCCCC
Q 016901          158 EPALG-------NASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAA----TIAK-VNHFIMVSSLGTNKFG  219 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~----~~~~-v~r~V~~SS~~~~~~~  219 (380)
                      .+++.       ++|+||||||.......      ++...+++|+.+...+++++    ++.+ .++||++||.......
T Consensus       481 ~~a~~~i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~  560 (676)
T TIGR02632       481 KAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAG  560 (676)
T ss_pred             HHHHHHHHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCC
Confidence            87764       68999999996532211      12334678888877665443    4444 3589999997543221


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCccccccc--------ceee------ccCCcc
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETH--------NITL------SQEDTL  278 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~~~--------~~~~------~~~~~~  278 (380)
                            .....|+.+|.+.+.+++.       .|++++.|+||.++.+.+.+....        ....      ......
T Consensus       561 ------~~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  634 (676)
T TIGR02632       561 ------KNASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTL  634 (676)
T ss_pred             ------CCCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHhcCC
Confidence                  2235799999999988762       589999999999873211111000        0000      011122


Q ss_pred             cCCCCCHHHHHHHHHHHHhCC-CCccCcEEEEecCCC
Q 016901          279 FGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAETT  314 (380)
Q Consensus       279 ~~~~i~~~DvA~~i~~~l~~~-~~~~~~~~ni~~~~~  314 (380)
                      .+.+++++|+|+++..++.+. ....|.++++.+|..
T Consensus       635 l~r~v~peDVA~av~~L~s~~~~~~TG~~i~vDGG~~  671 (676)
T TIGR02632       635 LKRHIFPADIAEAVFFLASSKSEKTTGCIITVDGGVP  671 (676)
T ss_pred             cCCCcCHHHHHHHHHHHhCCcccCCcCcEEEECCCch
Confidence            345689999999999998753 334688899887753

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.80  E-value=4.3e-18  Score=157.71  Aligned_cols=216  Identities=13%  Similarity=0.120  Sum_probs=143.7

Q ss_pred             CCCCCeEEEEcC--CChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCCh
Q 016901           77 SKDDNLAFVAGA--TGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (380)
Q Consensus        77 ~~~~~~vlVtGa--tG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~  154 (380)
                      .+++++++||||  +++||.+++++|+++|++|++..|.....+.+.+..+.+              +...++++|++|+
T Consensus         3 ~l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~Dv~d~   68 (260)
T PRK06997          3 FLAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEF--------------GSDLVFPCDVASD   68 (260)
T ss_pred             ccCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhc--------------CCcceeeccCCCH
Confidence            346789999996  679999999999999999998866422222222111111              2234688999999


Q ss_pred             hcHHHHh-------cCCCEEEEccccCccc-----------cCCCCCcchhhHHHHHHHHHHHHHc--CCCEEEEEccCC
Q 016901          155 VQIEPAL-------GNASVVICCIGASEKE-----------VFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLG  214 (380)
Q Consensus       155 ~~~~~a~-------~~~d~Vi~~Ag~~~~~-----------~~~~~~~~~~nv~g~~~ll~a~~~~--~v~r~V~~SS~~  214 (380)
                      +++++++       +.+|++|||||.....           ..++...+++|+.+...+++++...  +-+++|++||.+
T Consensus        69 ~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~  148 (260)
T PRK06997         69 EQIDALFASLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLG  148 (260)
T ss_pred             HHHHHHHHHHHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccc
Confidence            8888776       4689999999964321           1123334789999998888876532  235899999976


Q ss_pred             CCCCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccc-cce-eeccCCcccCCCCCH
Q 016901          215 TNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-HNI-TLSQEDTLFGGQVSN  285 (380)
Q Consensus       215 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~-~~~-~~~~~~~~~~~~i~~  285 (380)
                      ....      ......|+.+|++.+.+.+       .+|++++.|.||++..+....... ... .........+....+
T Consensus       149 ~~~~------~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p  222 (260)
T PRK06997        149 AERV------VPNYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDFGKILDFVESNAPLRRNVTI  222 (260)
T ss_pred             cccC------CCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccchhhHHHHHHhcCcccccCCH
Confidence            5321      1223469999999987765       368999999999997753211000 000 000011123346789


Q ss_pred             HHHHHHHHHHHhCC-CCccCcEEEEecC
Q 016901          286 LQVAELLACMAKNR-SLSYCKVVEVIAE  312 (380)
Q Consensus       286 ~DvA~~i~~~l~~~-~~~~~~~~ni~~~  312 (380)
                      +|+|+++..++... ....++++.+-++
T Consensus       223 edva~~~~~l~s~~~~~itG~~i~vdgg  250 (260)
T PRK06997        223 EEVGNVAAFLLSDLASGVTGEITHVDSG  250 (260)
T ss_pred             HHHHHHHHHHhCccccCcceeEEEEcCC
Confidence            99999999999763 3356777776555

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.80  E-value=4e-18  Score=157.66  Aligned_cols=216  Identities=15%  Similarity=0.172  Sum_probs=144.9

Q ss_pred             CCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCCch--hHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCC
Q 016901           78 KDDNLAFVAGAT--GKVGSRTVRELLKLGFRVRAGVRSVQ--RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK  153 (380)
Q Consensus        78 ~~~~~vlVtGat--G~iG~~lv~~Ll~~G~~V~~l~R~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d  153 (380)
                      +++++++||||+  ++||++++++|+++|++|++..|+.+  +.++..+++...             ...+.++++|++|
T Consensus         4 l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~Dl~d   70 (258)
T PRK07370          4 LTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEP-------------LNPSLFLPCDVQD   70 (258)
T ss_pred             cCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhc-------------cCcceEeecCcCC
Confidence            467899999986  89999999999999999988876543  222222222211             0346788999999


Q ss_pred             hhcHHHHh-------cCCCEEEEccccCcc-----c-----cCCCCCcchhhHHHHHHHHHHHHHc--CCCEEEEEccCC
Q 016901          154 RVQIEPAL-------GNASVVICCIGASEK-----E-----VFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLG  214 (380)
Q Consensus       154 ~~~~~~a~-------~~~d~Vi~~Ag~~~~-----~-----~~~~~~~~~~nv~g~~~ll~a~~~~--~v~r~V~~SS~~  214 (380)
                      .+++++++       +.+|++|||||....     .     ..++...+++|+.++..+++++...  .-++||++||.+
T Consensus        71 ~~~v~~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~  150 (258)
T PRK07370         71 DAQIEETFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLG  150 (258)
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccc
Confidence            98887765       468999999996421     1     1123455889999988888776421  126899999976


Q ss_pred             CCCCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccc--cceeeccCCcccCCCCCH
Q 016901          215 TNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET--HNITLSQEDTLFGGQVSN  285 (380)
Q Consensus       215 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~--~~~~~~~~~~~~~~~i~~  285 (380)
                      ....      ......|+.+|.+.+.+.+       ..|++++.|.||++..+.......  ............+.+..+
T Consensus       151 ~~~~------~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~  224 (258)
T PRK07370        151 GVRA------IPNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGILDMIHHVEEKAPLRRTVTQ  224 (258)
T ss_pred             cccC------CcccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccchhhhhhhhhcCCcCcCCCH
Confidence            5321      1233469999999997765       268999999999998763211000  000000011123346789


Q ss_pred             HHHHHHHHHHHhCCC-CccCcEEEEecC
Q 016901          286 LQVAELLACMAKNRS-LSYCKVVEVIAE  312 (380)
Q Consensus       286 ~DvA~~i~~~l~~~~-~~~~~~~ni~~~  312 (380)
                      +|+|.++..++.+.. ...|+++.+-++
T Consensus       225 ~dva~~~~fl~s~~~~~~tG~~i~vdgg  252 (258)
T PRK07370        225 TEVGNTAAFLLSDLASGITGQTIYVDAG  252 (258)
T ss_pred             HHHHHHHHHHhChhhccccCcEEEECCc
Confidence            999999999997543 345677766555

>PRK05855 short chain dehydrogenase; Validated

Probab=99.80  E-value=4.1e-18  Score=174.99  Aligned_cols=204  Identities=15%  Similarity=0.075  Sum_probs=146.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +.++++|||||+|+||++++++|+++|++|++++|+.++.+++.+.++..+             .++.++.+|++|++++
T Consensus       313 ~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~Dv~~~~~~  379 (582)
T PRK05855        313 FSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAG-------------AVAHAYRVDVSDADAM  379 (582)
T ss_pred             CCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------------CeEEEEEcCCCCHHHH
Confidence            456899999999999999999999999999999999888777666554321             4688999999999888


Q ss_pred             HHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHH----HcC-CCEEEEEccCCCCCCC
Q 016901          158 EPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAK-VNHFIMVSSLGTNKFG  219 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~----~~~-v~r~V~~SS~~~~~~~  219 (380)
                      .++++       .+|+||||||......      .++...+++|+.|+.++++++.    +.+ .++||++||.......
T Consensus       380 ~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~  459 (582)
T PRK05855        380 EAFAEWVRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPS  459 (582)
T ss_pred             HHHHHHHHHhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCC
Confidence            77763       5899999999653221      1233447799999998887753    344 3589999998664321


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceee-------ccCCcc-cCCCCC
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITL-------SQEDTL-FGGQVS  284 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~-------~~~~~~-~~~~i~  284 (380)
                            .....|+.+|++.+.+.+       .+|+++++|+||.+.++............       ...... ....+.
T Consensus       460 ------~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  533 (582)
T PRK05855        460 ------RSLPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKLYQRRGYG  533 (582)
T ss_pred             ------CCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhhhccccCCC
Confidence                  234579999999887754       36999999999999776321100000000       000000 112368


Q ss_pred             HHHHHHHHHHHHhCCC
Q 016901          285 NLQVAELLACMAKNRS  300 (380)
Q Consensus       285 ~~DvA~~i~~~l~~~~  300 (380)
                      ++|+|+.++.++.++.
T Consensus       534 p~~va~~~~~~~~~~~  549 (582)
T PRK05855        534 PEKVAKAIVDAVKRNK  549 (582)
T ss_pred             HHHHHHHHHHHHHcCC
Confidence            9999999999998765

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.80  E-value=4e-18  Score=158.05  Aligned_cols=216  Identities=12%  Similarity=0.105  Sum_probs=144.5

Q ss_pred             CCCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh
Q 016901           78 KDDNLAFVAGATG--KVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (380)
Q Consensus        78 ~~~~~vlVtGatG--~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~  155 (380)
                      +++++++||||++  +||+++++.|+++|++|++..|+. +.++..+++...             .+.+.++.+|++|++
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~-~~~~~~~~~~~~-------------~~~~~~~~~Dl~~~~   69 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQ-------------LGSDIVLPCDVAEDA   69 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecch-hHHHHHHHHHhc-------------cCCceEeecCCCCHH
Confidence            4678999999986  999999999999999999888873 322222222210             134667899999998


Q ss_pred             cHHHHh-------cCCCEEEEccccCcccc-----------CCCCCcchhhHHHHHHHHHHHHHc--CCCEEEEEccCCC
Q 016901          156 QIEPAL-------GNASVVICCIGASEKEV-----------FDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGT  215 (380)
Q Consensus       156 ~~~~a~-------~~~d~Vi~~Ag~~~~~~-----------~~~~~~~~~nv~g~~~ll~a~~~~--~v~r~V~~SS~~~  215 (380)
                      ++++++       +.+|++|||||......           .++...+++|+.+...+.+++...  .-.+||++||.+.
T Consensus        70 ~v~~~~~~~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~  149 (262)
T PRK07984         70 SIDAMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGA  149 (262)
T ss_pred             HHHHHHHHHHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCC
Confidence            888766       45899999998643211           112234678999888877776431  1258999999765


Q ss_pred             CCCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccccccc-ce-eeccCCcccCCCCCHH
Q 016901          216 NKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH-NI-TLSQEDTLFGGQVSNL  286 (380)
Q Consensus       216 ~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~-~~-~~~~~~~~~~~~i~~~  286 (380)
                      ...      ......|+.+|.+.+.+.+       ..|++++.|.||++..+........ .. .........+.+..++
T Consensus       150 ~~~------~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pe  223 (262)
T PRK07984        150 ERA------IPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIE  223 (262)
T ss_pred             CCC------CCCcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCchHHHHHHHHHcCCCcCCCCHH
Confidence            321      1223469999999998876       2689999999999977521100000 00 0000111234567999


Q ss_pred             HHHHHHHHHHhCC-CCccCcEEEEecCC
Q 016901          287 QVAELLACMAKNR-SLSYCKVVEVIAET  313 (380)
Q Consensus       287 DvA~~i~~~l~~~-~~~~~~~~ni~~~~  313 (380)
                      |+|.++..++.+. ....+.++.+.++.
T Consensus       224 dva~~~~~L~s~~~~~itG~~i~vdgg~  251 (262)
T PRK07984        224 DVGNSAAFLCSDLSAGISGEVVHVDGGF  251 (262)
T ss_pred             HHHHHHHHHcCcccccccCcEEEECCCc
Confidence            9999999999763 33467777776653

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.80  E-value=4.8e-18  Score=157.08  Aligned_cols=217  Identities=12%  Similarity=0.124  Sum_probs=144.1

Q ss_pred             CCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh
Q 016901           78 KDDNLAFVAGAT--GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (380)
Q Consensus        78 ~~~~~vlVtGat--G~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~  155 (380)
                      +.+|+++||||+  ++||++++++|+++|++|++..|+....+.+.+....+.            ..++.++++|++|.+
T Consensus         5 ~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~------------~~~~~~~~~Dv~d~~   72 (257)
T PRK08594          5 LEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLE------------GQESLLLPCDVTSDE   72 (257)
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcC------------CCceEEEecCCCCHH
Confidence            467899999997  899999999999999999998876422222222111110            146888999999998


Q ss_pred             cHHHHh-------cCCCEEEEccccCcc----cc-C-----CCCCcchhhHHHHHHHHHHHHHc--CCCEEEEEccCCCC
Q 016901          156 QIEPAL-------GNASVVICCIGASEK----EV-F-----DITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTN  216 (380)
Q Consensus       156 ~~~~a~-------~~~d~Vi~~Ag~~~~----~~-~-----~~~~~~~~nv~g~~~ll~a~~~~--~v~r~V~~SS~~~~  216 (380)
                      ++++++       +.+|++|||||....    .. .     .+...+++|+.+...+++++...  ...+||++||....
T Consensus        73 ~v~~~~~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~  152 (257)
T PRK08594         73 EITACFETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGE  152 (257)
T ss_pred             HHHHHHHHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCc
Confidence            877665       458999999986421    00 1     12233678899888777776532  12589999997653


Q ss_pred             CCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccc--cceeeccCCcccCCCCCHHH
Q 016901          217 KFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET--HNITLSQEDTLFGGQVSNLQ  287 (380)
Q Consensus       217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~--~~~~~~~~~~~~~~~i~~~D  287 (380)
                      ..      ......|+.+|.+.+.+.+       .+|++++.|.||.+.++.......  ............+.+..++|
T Consensus       153 ~~------~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~  226 (257)
T PRK08594        153 RV------VQNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGFNSILKEIEERAPLRRTTTQEE  226 (257)
T ss_pred             cC------CCCCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccccHHHHHHhhcCCccccCCHHH
Confidence            21      1223469999999997765       368999999999998763210000  00000001112234678999


Q ss_pred             HHHHHHHHHhCCC-CccCcEEEEecC
Q 016901          288 VAELLACMAKNRS-LSYCKVVEVIAE  312 (380)
Q Consensus       288 vA~~i~~~l~~~~-~~~~~~~ni~~~  312 (380)
                      +|++++.++.... ...|.++.+-++
T Consensus       227 va~~~~~l~s~~~~~~tG~~~~~dgg  252 (257)
T PRK08594        227 VGDTAAFLFSDLSRGVTGENIHVDSG  252 (257)
T ss_pred             HHHHHHHHcCcccccccceEEEECCc
Confidence            9999999987533 345777766554

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.79  E-value=2.6e-18  Score=153.74  Aligned_cols=239  Identities=15%  Similarity=0.018  Sum_probs=174.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      +|++||||-||+-|++|++.|+++|+.|+.+.|+.+....-+-.+..         -+-+...++.++.||++|...+.+
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~---------~~~~~~~~l~l~~gDLtD~~~l~r   72 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYE---------DPHLNDPRLHLHYGDLTDSSNLLR   72 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceecc---------ccccCCceeEEEeccccchHHHHH
Confidence            57899999999999999999999999999999874322110000111         111223568999999999999999


Q ss_pred             Hhc--CCCEEEEccccC--ccccCCCCCcchhhHHHHHHHHHHHHHcCC--CEEEEEccCCCCC-----CCCchhhhchh
Q 016901          160 ALG--NASVVICCIGAS--EKEVFDITGPYRIDFQATKNLVDAATIAKV--NHFIMVSSLGTNK-----FGFPAAILNLF  228 (380)
Q Consensus       160 a~~--~~d~Vi~~Ag~~--~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v--~r~V~~SS~~~~~-----~~~~~~~~~~~  228 (380)
                      +++  ..|-|+|+|+..  ..++..+....+++-.|+.+++++++..+.  -||...||.-.+.     +..+..+..|.
T Consensus        73 ~l~~v~PdEIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~TPFyPr  152 (345)
T COG1089          73 ILEEVQPDEIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKETTPFYPR  152 (345)
T ss_pred             HHHhcCchhheeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccCCCCCCC
Confidence            996  479999999844  345556677788899999999999998764  3888888853311     22344567788


Q ss_pred             hHHHHHHHHHHHHHH----HCCCCEEEEecCcccCCCcc--c--------------ccccceeeccCCcccCCCCCHHHH
Q 016901          229 WGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDA--Y--------------KETHNITLSQEDTLFGGQVSNLQV  288 (380)
Q Consensus       229 ~~Y~~sK~~~E~~l~----~~g~~~~ivRpg~v~gp~~~--~--------------~~~~~~~~~~~~~~~~~~i~~~Dv  288 (380)
                      ++|+.+|..+-.+..    .+|+-.|.=...+-.+|...  +              .....+.+ +......+|-|..|.
T Consensus       153 SPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~l-GNldAkRDWG~A~DY  231 (345)
T COG1089         153 SPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYL-GNLDAKRDWGHAKDY  231 (345)
T ss_pred             CHHHHHHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEe-ccccccccccchHHH
Confidence            999999999986653    57887766556665566321  1              00111111 222334578999999


Q ss_pred             HHHHHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCCCC
Q 016901          289 AELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (380)
Q Consensus       289 A~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~  331 (380)
                      +++|+.+++.+.   ...|.+..++..|.+|++++..+..|..
T Consensus       232 Ve~mwlmLQq~~---PddyViATg~t~sVrefv~~Af~~~g~~  271 (345)
T COG1089         232 VEAMWLMLQQEE---PDDYVIATGETHSVREFVELAFEMVGID  271 (345)
T ss_pred             HHHHHHHHccCC---CCceEEecCceeeHHHHHHHHHHHcCce
Confidence            999999999877   6779999999999999999999888744

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.79  E-value=9.5e-18  Score=152.99  Aligned_cols=210  Identities=17%  Similarity=0.122  Sum_probs=143.8

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEeCCc-hhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHHh
Q 016901           83 AFVAGATGKVGSRTVRELLKLGFRVRAGVRSV-QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPAL  161 (380)
Q Consensus        83 vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a~  161 (380)
                      |+||||+|+||.++++.|+++|++|+++.|.. ++.+.+.+.++..             ..++.++.+|++|.+++.+++
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~-------------~~~~~~~~~Dl~~~~~~~~~~   67 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQ-------------GGNARLLQFDVADRVACRTLL   67 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc-------------CCeEEEEEccCCCHHHHHHHH
Confidence            68999999999999999999999999988754 4444444433321             156889999999998887765


Q ss_pred             -------cCCCEEEEccccCccc------cCCCCCcchhhHHHHHHHHHHHH-----HcCCCEEEEEccCCCCCCCCchh
Q 016901          162 -------GNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAAT-----IAKVNHFIMVSSLGTNKFGFPAA  223 (380)
Q Consensus       162 -------~~~d~Vi~~Ag~~~~~------~~~~~~~~~~nv~g~~~ll~a~~-----~~~v~r~V~~SS~~~~~~~~~~~  223 (380)
                             +.+|.+|||+|.....      ..++...+++|+.++.++++++.     +.+.++||++||.......    
T Consensus        68 ~~~~~~~~~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~----  143 (239)
T TIGR01831        68 EADIAEHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGN----  143 (239)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCC----
Confidence                   3579999999864321      12334457899999999988752     2445689999996543221    


Q ss_pred             hhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHHHH
Q 016901          224 ILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMA  296 (380)
Q Consensus       224 ~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l  296 (380)
                        .....|+.+|.+.+.+.+       ..|++++.|+||++.++............. .....+....++|+|+++..++
T Consensus       144 --~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~va~~~~~l~  220 (239)
T TIGR01831       144 --RGQVNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAEVEHDLDEAL-KTVPMNRMGQPAEVASLAGFLM  220 (239)
T ss_pred             --CCCcchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchhhhHHHHHHH-hcCCCCCCCCHHHHHHHHHHHc
Confidence              123469999998876654       368999999999998774321110000000 1111234578999999999998


Q ss_pred             hCC-CCccCcEEEEecC
Q 016901          297 KNR-SLSYCKVVEVIAE  312 (380)
Q Consensus       297 ~~~-~~~~~~~~ni~~~  312 (380)
                      .++ ....+..+.+.++
T Consensus       221 ~~~~~~~~g~~~~~~gg  237 (239)
T TIGR01831       221 SDGASYVTRQVISVNGG  237 (239)
T ss_pred             CchhcCccCCEEEecCC
Confidence            864 3345666555544

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.79  E-value=5.3e-18  Score=157.07  Aligned_cols=216  Identities=10%  Similarity=0.079  Sum_probs=143.6

Q ss_pred             CCCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh
Q 016901           78 KDDNLAFVAGATG--KVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (380)
Q Consensus        78 ~~~~~vlVtGatG--~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~  155 (380)
                      +++|+++||||++  +||+++++.|+++|++|++..|+. ..++..+.+...             .....++++|++|++
T Consensus         6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~-------------~g~~~~~~~Dv~~~~   71 (260)
T PRK06603          6 LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEE-------------IGCNFVSELDVTNPK   71 (260)
T ss_pred             cCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHh-------------cCCceEEEccCCCHH
Confidence            4678999999997  899999999999999999988874 222222222110             012345789999998


Q ss_pred             cHHHHh-------cCCCEEEEccccCccc----------cCCCCCcchhhHHHHHHHHHHHHHc--CCCEEEEEccCCCC
Q 016901          156 QIEPAL-------GNASVVICCIGASEKE----------VFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTN  216 (380)
Q Consensus       156 ~~~~a~-------~~~d~Vi~~Ag~~~~~----------~~~~~~~~~~nv~g~~~ll~a~~~~--~v~r~V~~SS~~~~  216 (380)
                      ++++++       +.+|++|||||.....          ..++...+++|+.+...+++++...  .-+++|++||.+..
T Consensus        72 ~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~  151 (260)
T PRK06603         72 SISNLFDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAE  151 (260)
T ss_pred             HHHHHHHHHHHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccc
Confidence            887766       4589999999864211          1123334789999998888776421  12589999997653


Q ss_pred             CCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccc--cceeeccCCcccCCCCCHHH
Q 016901          217 KFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET--HNITLSQEDTLFGGQVSNLQ  287 (380)
Q Consensus       217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~--~~~~~~~~~~~~~~~i~~~D  287 (380)
                      ..      ......|+.+|++.+.+.+       .+|++++.|.||.+.++.......  ............+.+..++|
T Consensus       152 ~~------~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~ped  225 (260)
T PRK06603        152 KV------IPNYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAATAPLKRNTTQED  225 (260)
T ss_pred             cC------CCcccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCcHHHHHHHHhcCCcCCCCCHHH
Confidence            21      1223469999999987765       378999999999997763110000  00000001112334678999


Q ss_pred             HHHHHHHHHhCCC-CccCcEEEEecCC
Q 016901          288 VAELLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       288 vA~~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      +|++++.++.... ...++++.+-++.
T Consensus       226 va~~~~~L~s~~~~~itG~~i~vdgG~  252 (260)
T PRK06603        226 VGGAAVYLFSELSKGVTGEIHYVDCGY  252 (260)
T ss_pred             HHHHHHHHhCcccccCcceEEEeCCcc
Confidence            9999999997643 3457777776653

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.79  E-value=1.1e-17  Score=155.45  Aligned_cols=214  Identities=17%  Similarity=0.130  Sum_probs=141.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC-chhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH--
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS-VQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI--  157 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~--  157 (380)
                      ++++||||+|+||++++++|+++|++|+++.|+ +++...+.+.+...            ...++.++.+|++|.+++  
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~------------~~~~~~~~~~Dv~d~~~~~~   69 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNAR------------RPNSAVTCQADLSNSATLFS   69 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhc------------cCCceEEEEccCCCchhhHH
Confidence            479999999999999999999999999998764 45555444433211            013567789999998754  


Q ss_pred             --HHHh-------cCCCEEEEccccCccccC---C--------------CCCcchhhHHHHHHHHHHHHHcC--------
Q 016901          158 --EPAL-------GNASVVICCIGASEKEVF---D--------------ITGPYRIDFQATKNLVDAATIAK--------  203 (380)
Q Consensus       158 --~~a~-------~~~d~Vi~~Ag~~~~~~~---~--------------~~~~~~~nv~g~~~ll~a~~~~~--------  203 (380)
                        ++++       +++|+||||||.......   +              +...+++|+.++..+++++....        
T Consensus        70 ~~~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~  149 (267)
T TIGR02685        70 RCEAIIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQR  149 (267)
T ss_pred             HHHHHHHHHHHccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccC
Confidence              3332       469999999996422111   1              12347899999998888764221        


Q ss_pred             --CCEEEEEccCCCCCCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeecc
Q 016901          204 --VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQ  274 (380)
Q Consensus       204 --v~r~V~~SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~  274 (380)
                        ..++|++||......      ......|+.+|.+.+.+++       ..|++++.|+||++..|...... .......
T Consensus       150 ~~~~~iv~~~s~~~~~~------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~~~-~~~~~~~  222 (267)
T TIGR02685       150 STNLSIVNLCDAMTDQP------LLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMPFE-VQEDYRR  222 (267)
T ss_pred             CCCeEEEEehhhhccCC------CcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccchh-HHHHHHH
Confidence              236888888654221      1234579999999998765       26899999999999766432110 0000111


Q ss_pred             CCcccCCCCCHHHHHHHHHHHHhCCC-CccCcEEEEecCC
Q 016901          275 EDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       275 ~~~~~~~~i~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      ..........++|+|++++.++.+.. ...|+.+.+-++.
T Consensus       223 ~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~v~gg~  262 (267)
T TIGR02685       223 KVPLGQREASAEQIADVVIFLVSPKAKYITGTCIKVDGGL  262 (267)
T ss_pred             hCCCCcCCCCHHHHHHHHHHHhCcccCCcccceEEECCce
Confidence            11111135799999999999997643 3467777776664

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.79  E-value=1.6e-18  Score=158.62  Aligned_cols=197  Identities=18%  Similarity=0.131  Sum_probs=135.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      +|+++||||+|+||++++++|+++|++|++++|+..+..  .   ..             ...++.++++|++|.+++++
T Consensus         1 ~~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~--~---~~-------------~~~~~~~~~~D~~~~~~~~~   62 (243)
T PRK07023          1 AVRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSL--A---AA-------------AGERLAEVELDLSDAAAAAA   62 (243)
T ss_pred             CceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhh--h---hc-------------cCCeEEEEEeccCCHHHHHH
Confidence            358999999999999999999999999999999865421  0   00             01468899999999988877


Q ss_pred             Hhc-----------CCCEEEEccccCccc-------cCCCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCC
Q 016901          160 ALG-----------NASVVICCIGASEKE-------VFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNK  217 (380)
Q Consensus       160 a~~-----------~~d~Vi~~Ag~~~~~-------~~~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~  217 (380)
                      ++.           .+|++|||||.....       ..++...+++|+.|+..+++.+    .+.+.++||++||.....
T Consensus        63 ~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~  142 (243)
T PRK07023         63 WLAGDLLAAFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARN  142 (243)
T ss_pred             HHHHHHHHHhccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcC
Confidence            431           479999999864321       1123445788999966665554    444567999999976533


Q ss_pred             CCCchhhhchhhHHHHHHHHHHHHHH------HCCCCEEEEecCcccCCCcccccccc---eeec---cCCcccCCCCCH
Q 016901          218 FGFPAAILNLFWGVLLWKRKAEEALI------ASGLPYTIVRPGGMERPTDAYKETHN---ITLS---QEDTLFGGQVSN  285 (380)
Q Consensus       218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~------~~g~~~~ivRpg~v~gp~~~~~~~~~---~~~~---~~~~~~~~~i~~  285 (380)
                      .      ......|+.+|...|.+++      ..|+++++|+||.+.++.........   ....   ......+..+.+
T Consensus       143 ~------~~~~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (243)
T PRK07023        143 A------YAGWSVYCATKAALDHHARAVALDANRALRIVSLAPGVVDTGMQATIRATDEERFPMRERFRELKASGALSTP  216 (243)
T ss_pred             C------CCCchHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccHHHHHHHhcccccchHHHHHHHhhhcCCCCCH
Confidence            2      1234579999999998876      25899999999999766321000000   0000   000112346889


Q ss_pred             HHHHHHHHHHHhCCC
Q 016901          286 LQVAELLACMAKNRS  300 (380)
Q Consensus       286 ~DvA~~i~~~l~~~~  300 (380)
                      +|+|..++..+..+.
T Consensus       217 ~~va~~~~~~l~~~~  231 (243)
T PRK07023        217 EDAARRLIAYLLSDD  231 (243)
T ss_pred             HHHHHHHHHHHhccc
Confidence            999997777776665

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.79  E-value=6.4e-18  Score=160.26  Aligned_cols=213  Identities=14%  Similarity=0.083  Sum_probs=144.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCc-hhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV-QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~  155 (380)
                      .+++++++||||+|+||++++++|+++|++|++.+|+. ...+...+.++..+             .++.++.+|++|.+
T Consensus         9 ~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g-------------~~~~~~~~Dv~d~~   75 (306)
T PRK07792          9 DLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAG-------------AKAVAVAGDISQRA   75 (306)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcC-------------CeEEEEeCCCCCHH
Confidence            34678999999999999999999999999999988754 34444444443221             56889999999988


Q ss_pred             cHHHHh------cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHHH----c-------CCCEEEEEcc
Q 016901          156 QIEPAL------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATI----A-------KVNHFIMVSS  212 (380)
Q Consensus       156 ~~~~a~------~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~~----~-------~v~r~V~~SS  212 (380)
                      ++.+++      +.+|+||||||......      .++...+++|+.|+.++++++..    .       ..++||++||
T Consensus        76 ~~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS  155 (306)
T PRK07792         76 TADELVATAVGLGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSS  155 (306)
T ss_pred             HHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECC
Confidence            777665      46899999999653221      12334578999999999887642    1       1258999999


Q ss_pred             CCCCCCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCH
Q 016901          213 LGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSN  285 (380)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~  285 (380)
                      .......      .....|+.+|.+++.+++       .+|+++++|.||. ..+..... ...  ..........++++
T Consensus       156 ~~~~~~~------~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~~~~~~-~~~--~~~~~~~~~~~~~p  225 (306)
T PRK07792        156 EAGLVGP------VGQANYGAAKAGITALTLSAARALGRYGVRANAICPRA-RTAMTADV-FGD--APDVEAGGIDPLSP  225 (306)
T ss_pred             cccccCC------CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCchhhhh-ccc--cchhhhhccCCCCH
Confidence            7543211      123469999999987764       3789999999984 22211000 000  00000011235789


Q ss_pred             HHHHHHHHHHHhCCC-CccCcEEEEecC
Q 016901          286 LQVAELLACMAKNRS-LSYCKVVEVIAE  312 (380)
Q Consensus       286 ~DvA~~i~~~l~~~~-~~~~~~~ni~~~  312 (380)
                      +|+|.++..++.... ...|++|.+.++
T Consensus       226 e~va~~v~~L~s~~~~~~tG~~~~v~gg  253 (306)
T PRK07792        226 EHVVPLVQFLASPAAAEVNGQVFIVYGP  253 (306)
T ss_pred             HHHHHHHHHHcCccccCCCCCEEEEcCC
Confidence            999999998887533 345777777654

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.79  E-value=1.3e-17  Score=174.06  Aligned_cols=195  Identities=15%  Similarity=0.211  Sum_probs=146.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++++++||||+|+||++++++|+++|++|++++|+++..+++.+.+...+             .++.++.+|++|.+++
T Consensus       369 ~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~Dv~~~~~~  435 (657)
T PRK07201        369 LVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKG-------------GTAHAYTCDLTDSAAV  435 (657)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-------------CcEEEEEecCCCHHHH
Confidence            467899999999999999999999999999999999887776655443321             5688999999999888


Q ss_pred             HHHhc-------CCCEEEEccccCcccc--------CCCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCC
Q 016901          158 EPALG-------NASVVICCIGASEKEV--------FDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKF  218 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~~~~--------~~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~  218 (380)
                      +++++       ++|+||||||......        .++...+++|+.|+.++++++    ++.+.++||++||.++...
T Consensus       436 ~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~  515 (657)
T PRK07201        436 DHTVKDILAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTN  515 (657)
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCC
Confidence            87764       6899999999642111        123345789999988876665    4556779999999876432


Q ss_pred             CCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHH
Q 016901          219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAEL  291 (380)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~  291 (380)
                      .      .....|+.+|.+.+.+++       ..|+++++|+||++.++......    ..   .  ....++++++|+.
T Consensus       516 ~------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~~----~~---~--~~~~~~~~~~a~~  580 (657)
T PRK07201        516 A------PRFSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPTK----RY---N--NVPTISPEEAADM  580 (657)
T ss_pred             C------CCcchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCccc----cc---c--CCCCCCHHHHHHH
Confidence            1      223569999999998765       26899999999999877432110    00   0  1135899999999


Q ss_pred             HHHHHhCCC
Q 016901          292 LACMAKNRS  300 (380)
Q Consensus       292 i~~~l~~~~  300 (380)
                      ++..+.+..
T Consensus       581 i~~~~~~~~  589 (657)
T PRK07201        581 VVRAIVEKP  589 (657)
T ss_pred             HHHHHHhCC
Confidence            999886543

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.79  E-value=6.3e-18  Score=160.79  Aligned_cols=221  Identities=14%  Similarity=0.044  Sum_probs=145.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .+++++++||||+|+||.+++++|+++|++|++++|+.++.++..+.+....           ...++.++.+|++|.++
T Consensus        11 ~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~-----------~~~~v~~~~~Dl~d~~s   79 (313)
T PRK05854         11 DLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAV-----------PDAKLSLRALDLSSLAS   79 (313)
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhC-----------CCCceEEEEecCCCHHH
Confidence            4567899999999999999999999999999999999887776665554321           11468899999999988


Q ss_pred             HHHHh-------cCCCEEEEccccCccc-----cCCCCCcchhhHHHHHHHHHHHH---HcCCCEEEEEccCCCCCCCC-
Q 016901          157 IEPAL-------GNASVVICCIGASEKE-----VFDITGPYRIDFQATKNLVDAAT---IAKVNHFIMVSSLGTNKFGF-  220 (380)
Q Consensus       157 ~~~a~-------~~~d~Vi~~Ag~~~~~-----~~~~~~~~~~nv~g~~~ll~a~~---~~~v~r~V~~SS~~~~~~~~-  220 (380)
                      +++++       +.+|++|||||.....     ...++..+.+|+.|...+++.+.   +.+..++|++||........ 
T Consensus        80 v~~~~~~~~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~  159 (313)
T PRK05854         80 VAALGEQLRAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAIN  159 (313)
T ss_pred             HHHHHHHHHHhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcC
Confidence            87765       3589999999965321     12334458899999887776654   22346899999975422110 


Q ss_pred             -----chhhhchhhHHHHHHHHHHHHHHH---------CCCCEEEEecCcccCCCcccc----cccce---eeccCCccc
Q 016901          221 -----PAAILNLFWGVLLWKRKAEEALIA---------SGLPYTIVRPGGMERPTDAYK----ETHNI---TLSQEDTLF  279 (380)
Q Consensus       221 -----~~~~~~~~~~Y~~sK~~~E~~l~~---------~g~~~~ivRpg~v~gp~~~~~----~~~~~---~~~~~~~~~  279 (380)
                           ......+...|+.||.+.+.+.++         .|++++.+.||.+.++.....    .....   .+.......
T Consensus       160 ~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (313)
T PRK05854        160 WDDLNWERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLAARPEVGRDKDTLMVRLIRSLSAR  239 (313)
T ss_pred             cccccccccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCccccccccccchhHHHHHHHHHHhhc
Confidence                 011224456799999998866541         479999999999976532110    00000   000000000


Q ss_pred             C-CCCCHHHHHHHHHHHHhCCCCccCcEEE
Q 016901          280 G-GQVSNLQVAELLACMAKNRSLSYCKVVE  308 (380)
Q Consensus       280 ~-~~i~~~DvA~~i~~~l~~~~~~~~~~~n  308 (380)
                      + -.-++++-|...+.++..+....|+.|.
T Consensus       240 ~~~~~~~~~ga~~~l~~a~~~~~~~g~~~~  269 (313)
T PRK05854        240 GFLVGTVESAILPALYAATSPDAEGGAFYG  269 (313)
T ss_pred             ccccCCHHHHHHHhhheeeCCCCCCCcEEC
Confidence            0 1236677788777777766544455553

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.78  E-value=2.8e-18  Score=158.45  Aligned_cols=210  Identities=15%  Similarity=0.108  Sum_probs=143.1

Q ss_pred             eEEEEcCCChHHHHHHHHHHH----CCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           82 LAFVAGATGKVGSRTVRELLK----LGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        82 ~vlVtGatG~iG~~lv~~Ll~----~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      .++||||+|+||.+++++|++    .|++|+++.|+.+..+++.+.++...           ...++.++.+|++|.+++
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~-----------~~~~v~~~~~Dl~~~~~v   70 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAER-----------SGLRVVRVSLDLGAEAGL   70 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcC-----------CCceEEEEEeccCCHHHH
Confidence            589999999999999999997    79999999999888777666554310           114688899999999888


Q ss_pred             HHHhcC-----------CCEEEEccccCccc---c------CCCCCcchhhHHHHHHHHHHHH----Hc-C-CCEEEEEc
Q 016901          158 EPALGN-----------ASVVICCIGASEKE---V------FDITGPYRIDFQATKNLVDAAT----IA-K-VNHFIMVS  211 (380)
Q Consensus       158 ~~a~~~-----------~d~Vi~~Ag~~~~~---~------~~~~~~~~~nv~g~~~ll~a~~----~~-~-v~r~V~~S  211 (380)
                      +++++.           .|+||||||.....   .      .++...+++|+.++..+++++.    +. + .++||++|
T Consensus        71 ~~~~~~~~~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~is  150 (256)
T TIGR01500        71 EQLLKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNIS  150 (256)
T ss_pred             HHHHHHHHhccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEEC
Confidence            776631           26999999864221   1      1223457899999877776653    32 2 35899999


Q ss_pred             cCCCCCCCCchhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcccc-cc-cc--e-eeccCCccc
Q 016901          212 SLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-ET-HN--I-TLSQEDTLF  279 (380)
Q Consensus       212 S~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~-~~-~~--~-~~~~~~~~~  279 (380)
                      |.+....      ......|+.+|.+.+.+.+.       .|++++.|.||++.++..... .. ..  . .........
T Consensus       151 S~~~~~~------~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  224 (256)
T TIGR01500       151 SLCAIQP------FKGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQELKAK  224 (256)
T ss_pred             CHHhCCC------CCCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCChhHHHHHHHHHhc
Confidence            9765321      12345799999999987652       689999999999987632100 00 00  0 000001112


Q ss_pred             CCCCCHHHHHHHHHHHHhCCCCccCcEEE
Q 016901          280 GGQVSNLQVAELLACMAKNRSLSYCKVVE  308 (380)
Q Consensus       280 ~~~i~~~DvA~~i~~~l~~~~~~~~~~~n  308 (380)
                      +.+..++|+|..++.++.+.....|+.+.
T Consensus       225 ~~~~~p~eva~~~~~l~~~~~~~~G~~~~  253 (256)
T TIGR01500       225 GKLVDPKVSAQKLLSLLEKDKFKSGAHVD  253 (256)
T ss_pred             CCCCCHHHHHHHHHHHHhcCCcCCcceee
Confidence            34689999999999999755544455443

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.78  E-value=2.5e-17  Score=148.81  Aligned_cols=194  Identities=14%  Similarity=0.076  Sum_probs=140.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      +++++||||+|+||++++++|+++|++|++++|+.++.+++..                   .+++++.+|++|.+++++
T Consensus         1 ~~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~-------------------~~~~~~~~D~~~~~~v~~   61 (222)
T PRK06953          1 MKTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQA-------------------LGAEALALDVADPASVAG   61 (222)
T ss_pred             CceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHh-------------------ccceEEEecCCCHHHHHH
Confidence            3689999999999999999999999999999999776654432                   346689999999988887


Q ss_pred             Hh---c--CCCEEEEccccCcc--------ccCCCCCcchhhHHHHHHHHHHHHH---cCCCEEEEEccCCCCCCCCchh
Q 016901          160 AL---G--NASVVICCIGASEK--------EVFDITGPYRIDFQATKNLVDAATI---AKVNHFIMVSSLGTNKFGFPAA  223 (380)
Q Consensus       160 a~---~--~~d~Vi~~Ag~~~~--------~~~~~~~~~~~nv~g~~~ll~a~~~---~~v~r~V~~SS~~~~~~~~~~~  223 (380)
                      ++   .  ++|.||||+|....        ...++...+++|+.++.++++++..   ...+++|++||........+  
T Consensus        62 ~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~--  139 (222)
T PRK06953         62 LAWKLDGEALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDAT--  139 (222)
T ss_pred             HHHHhcCCCCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCccccccccc--
Confidence            64   2  48999999986521        1122345588999999999988864   22357999998644221111  


Q ss_pred             hhchhhHHHHHHHHHHHHHHH-----CCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHHHHhC
Q 016901          224 ILNLFWGVLLWKRKAEEALIA-----SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKN  298 (380)
Q Consensus       224 ~~~~~~~Y~~sK~~~E~~l~~-----~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~  298 (380)
                       ..+...|+.+|...+.+++.     .+++++.|+||++..+...           .    .+.+..+|.+..+..++..
T Consensus       140 -~~~~~~Y~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~~~-----------~----~~~~~~~~~~~~~~~~~~~  203 (222)
T PRK06953        140 -GTTGWLYRASKAALNDALRAASLQARHATCIALHPGWVRTDMGG-----------A----QAALDPAQSVAGMRRVIAQ  203 (222)
T ss_pred             -CCCccccHHhHHHHHHHHHHHhhhccCcEEEEECCCeeecCCCC-----------C----CCCCCHHHHHHHHHHHHHh
Confidence             11123599999999988763     4789999999999876321           0    2357889999999998765


Q ss_pred             CCC-ccCcEEEEe
Q 016901          299 RSL-SYCKVVEVI  310 (380)
Q Consensus       299 ~~~-~~~~~~ni~  310 (380)
                      ... ..+.+|...
T Consensus       204 ~~~~~~~~~~~~~  216 (222)
T PRK06953        204 ATRRDNGRFFQYD  216 (222)
T ss_pred             cCcccCceEEeeC
Confidence            432 234555543

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.78  E-value=1.2e-17  Score=153.30  Aligned_cols=184  Identities=15%  Similarity=0.056  Sum_probs=129.4

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh
Q 016901           76 DSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (380)
Q Consensus        76 ~~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~  155 (380)
                      ..+++++++||||+|+||++++++|+++|++|++++|+........   .           .    .....+.+|++|.+
T Consensus        10 ~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~---~-----------~----~~~~~~~~D~~~~~   71 (245)
T PRK12367         10 STWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESN---D-----------E----SPNEWIKWECGKEE   71 (245)
T ss_pred             HhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhh---c-----------c----CCCeEEEeeCCCHH
Confidence            4457789999999999999999999999999999999863211100   0           0    12357889999999


Q ss_pred             cHHHHhcCCCEEEEccccCccc---cCCCCCcchhhHHHHHHHHHHHHHc-------CCCEEEEEccCCCCCCCCchhhh
Q 016901          156 QIEPALGNASVVICCIGASEKE---VFDITGPYRIDFQATKNLVDAATIA-------KVNHFIMVSSLGTNKFGFPAAIL  225 (380)
Q Consensus       156 ~~~~a~~~~d~Vi~~Ag~~~~~---~~~~~~~~~~nv~g~~~ll~a~~~~-------~v~r~V~~SS~~~~~~~~~~~~~  225 (380)
                      ++.+.++++|++|||||.....   ..++...+++|+.|+.++++++...       +-+.++..||.+....  +    
T Consensus        72 ~~~~~~~~iDilVnnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~--~----  145 (245)
T PRK12367         72 SLDKQLASLDVLILNHGINPGGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQP--A----  145 (245)
T ss_pred             HHHHhcCCCCEEEECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCC--C----
Confidence            9999999999999999864221   2234455889999999999876431       1123434444432111  1    


Q ss_pred             chhhHHHHHHHHHHHHH---H-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHHH
Q 016901          226 NLFWGVLLWKRKAEEAL---I-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACM  295 (380)
Q Consensus       226 ~~~~~Y~~sK~~~E~~l---~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~  295 (380)
                       ....|+.||++.+.+.   +       ..++.++.+.||.+.++..              .  ...++++|+|+.++.+
T Consensus       146 -~~~~Y~aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~--------------~--~~~~~~~~vA~~i~~~  208 (245)
T PRK12367        146 -LSPSYEISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSELN--------------P--IGIMSADFVAKQILDQ  208 (245)
T ss_pred             -CCchhHHHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCcccccC--------------c--cCCCCHHHHHHHHHHH
Confidence             1235999999975322   1       3688899999998754421              0  1257899999999999


Q ss_pred             HhCCC
Q 016901          296 AKNRS  300 (380)
Q Consensus       296 l~~~~  300 (380)
                      +.+..
T Consensus       209 ~~~~~  213 (245)
T PRK12367        209 ANLGL  213 (245)
T ss_pred             HhcCC
Confidence            98765

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.78  E-value=1.1e-17  Score=154.56  Aligned_cols=212  Identities=13%  Similarity=0.092  Sum_probs=142.1

Q ss_pred             CCCCeEEEEcC--CChHHHHHHHHHHHCCCeEEEEeCCc--hhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCC
Q 016901           78 KDDNLAFVAGA--TGKVGSRTVRELLKLGFRVRAGVRSV--QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK  153 (380)
Q Consensus        78 ~~~~~vlVtGa--tG~iG~~lv~~Ll~~G~~V~~l~R~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d  153 (380)
                      +.+++++||||  +++||.+++++|+++|++|++..|+.  +..+++.+.+                ..++.++.+|++|
T Consensus         5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~----------------~~~~~~~~~Dv~~   68 (256)
T PRK07889          5 LEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRL----------------PEPAPVLELDVTN   68 (256)
T ss_pred             ccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhc----------------CCCCcEEeCCCCC
Confidence            45689999999  89999999999999999999998864  2223322211                0357789999999


Q ss_pred             hhcHHHHh-------cCCCEEEEccccCccc-----c-----CCCCCcchhhHHHHHHHHHHHHHc--CCCEEEEEccCC
Q 016901          154 RVQIEPAL-------GNASVVICCIGASEKE-----V-----FDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLG  214 (380)
Q Consensus       154 ~~~~~~a~-------~~~d~Vi~~Ag~~~~~-----~-----~~~~~~~~~nv~g~~~ll~a~~~~--~v~r~V~~SS~~  214 (380)
                      .+++++++       +++|++|||||.....     .     .++...+++|+.++..+++++...  .-+++|++|+.+
T Consensus        69 ~~~i~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~  148 (256)
T PRK07889         69 EEHLASLADRVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDA  148 (256)
T ss_pred             HHHHHHHHHHHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeecc
Confidence            98877665       4699999999965321     1     112234789999988887776432  125799988654


Q ss_pred             CCCCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccc-cce-eeccCCcccC-CCCC
Q 016901          215 TNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-HNI-TLSQEDTLFG-GQVS  284 (380)
Q Consensus       215 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~-~~~-~~~~~~~~~~-~~i~  284 (380)
                      ..  .     ...+..|+.+|+..+.+.+       ..|++++.|.||++..+....... ... .........+ .+..
T Consensus       149 ~~--~-----~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~~  221 (256)
T PRK07889        149 TV--A-----WPAYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGFELLEEGWDERAPLGWDVKD  221 (256)
T ss_pred             cc--c-----CCccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCcHHHHHHHHhcCccccccCC
Confidence            21  1     1233468999999987765       378999999999998763211000 000 0000011122 3578


Q ss_pred             HHHHHHHHHHHHhCCC-CccCcEEEEecC
Q 016901          285 NLQVAELLACMAKNRS-LSYCKVVEVIAE  312 (380)
Q Consensus       285 ~~DvA~~i~~~l~~~~-~~~~~~~ni~~~  312 (380)
                      ++|+|++++.++.+.. ...++++.+-++
T Consensus       222 p~evA~~v~~l~s~~~~~~tG~~i~vdgg  250 (256)
T PRK07889        222 PTPVARAVVALLSDWFPATTGEIVHVDGG  250 (256)
T ss_pred             HHHHHHHHHHHhCcccccccceEEEEcCc
Confidence            9999999999997643 345777766554

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.78  E-value=1.6e-17  Score=158.28  Aligned_cols=193  Identities=15%  Similarity=0.089  Sum_probs=137.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCC--hhc
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK--RVQ  156 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d--~~~  156 (380)
                      .+++++||||||+||++++++|+++|++|++++|++++.+++.++++...           ...++..+.+|+++  .+.
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~-----------~~~~~~~~~~Dl~~~~~~~  120 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKY-----------SKTQIKTVVVDFSGDIDEG  120 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHC-----------CCcEEEEEEEECCCCcHHH
Confidence            45789999999999999999999999999999999988877766554310           01357788899985  232


Q ss_pred             ---HHHHhcC--CCEEEEccccCccc--c------CCCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCC-C
Q 016901          157 ---IEPALGN--ASVVICCIGASEKE--V------FDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNK-F  218 (380)
Q Consensus       157 ---~~~a~~~--~d~Vi~~Ag~~~~~--~------~~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~-~  218 (380)
                         +.+.+++  +|++|||||.....  .      .+....+++|+.|+.++++++.    +.+.+++|++||..... .
T Consensus       121 ~~~l~~~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~  200 (320)
T PLN02780        121 VKRIKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIP  200 (320)
T ss_pred             HHHHHHHhcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCC
Confidence               3334444  56999999964321  1      1123347899999988887754    45667999999976532 1


Q ss_pred             CCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHH
Q 016901          219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAEL  291 (380)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~  291 (380)
                      ..     .....|+.+|.+.+.+.+       ..|+++++|+||.+.++....        . ....  ...+++++|+.
T Consensus       201 ~~-----p~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~--------~-~~~~--~~~~p~~~A~~  264 (320)
T PLN02780        201 SD-----PLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASI--------R-RSSF--LVPSSDGYARA  264 (320)
T ss_pred             CC-----ccchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCcccc--------c-CCCC--CCCCHHHHHHH
Confidence            11     224579999999987764       368999999999998763211        0 0111  13689999999


Q ss_pred             HHHHHhC
Q 016901          292 LACMAKN  298 (380)
Q Consensus       292 i~~~l~~  298 (380)
                      ++..+..
T Consensus       265 ~~~~~~~  271 (320)
T PLN02780        265 ALRWVGY  271 (320)
T ss_pred             HHHHhCC
Confidence            9999964

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=99.77  E-value=1.5e-17  Score=161.28  Aligned_cols=254  Identities=16%  Similarity=0.182  Sum_probs=167.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC---CeEEEEeCCch---hHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCC
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLG---FRVRAGVRSVQ---RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLE  152 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G---~~V~~l~R~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~  152 (380)
                      .+++|+|||||||+|+-+++.|++.-   .+++++.|...   ..+++..+.+. .+.....+...+...++..+.||+.
T Consensus        11 ~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~-~lF~~l~~~~p~~l~Kv~pi~GDi~   89 (467)
T KOG1221|consen   11 KNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKD-PLFEVLKEKKPEALEKVVPIAGDIS   89 (467)
T ss_pred             CCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhh-hHHHHHHhhCccceecceecccccc
Confidence            67899999999999999999999863   47899988553   33333333322 2211111122334578999999998


Q ss_pred             Ch------hcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcC-CCEEEEEccCCCCC--------
Q 016901          153 KR------VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK-VNHFIMVSSLGTNK--------  217 (380)
Q Consensus       153 d~------~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~-v~r~V~~SS~~~~~--------  217 (380)
                      ++      .+++.....+|+|||+|+.+.++. .......+|..||+++++.|++.. .+-+||+||+-+..        
T Consensus        90 ~~~LGis~~D~~~l~~eV~ivih~AAtvrFde-~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~i~E~  168 (467)
T KOG1221|consen   90 EPDLGISESDLRTLADEVNIVIHSAATVRFDE-PLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGHIEEK  168 (467)
T ss_pred             CcccCCChHHHHHHHhcCCEEEEeeeeeccch-hhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheeccccccccc
Confidence            74      455667789999999999776542 233446789999999999999875 67899999964421        


Q ss_pred             -CCC-----chh--------------------hhchhhHHHHHHHHHHHHHHH--CCCCEEEEecCcccCCCc-------
Q 016901          218 -FGF-----PAA--------------------ILNLFWGVLLWKRKAEEALIA--SGLPYTIVRPGGMERPTD-------  262 (380)
Q Consensus       218 -~~~-----~~~--------------------~~~~~~~Y~~sK~~~E~~l~~--~g~~~~ivRpg~v~gp~~-------  262 (380)
                       |..     +..                    ....-..|.-+|+.+|.++.+  .+++++|+||+.|.....       
T Consensus       169 ~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~~lPivIiRPsiI~st~~EP~pGWi  248 (467)
T KOG1221|consen  169 PYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAENLPLVIIRPSIITSTYKEPFPGWI  248 (467)
T ss_pred             ccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhccCCCeEEEcCCceeccccCCCCCcc
Confidence             110     100                    011123499999999999975  689999999988754321       


Q ss_pred             -ccccccceee----------ccCCcccCCCCCHHHHHHHHHHHHhCC--CC--ccCcEEEEecCCCC--CcchHHHHHH
Q 016901          263 -AYKETHNITL----------SQEDTLFGGQVSNLQVAELLACMAKNR--SL--SYCKVVEVIAETTA--PLTPMEELLA  325 (380)
Q Consensus       263 -~~~~~~~~~~----------~~~~~~~~~~i~~~DvA~~i~~~l~~~--~~--~~~~~~ni~~~~~~--s~~~~~e~~~  325 (380)
                       ...+...+.+          ..+.....+.|.+|.++.+++.+...-  ..  ....+||+++++..  +..++.++..
T Consensus       249 dn~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~Np~t~~~~~e~~~  328 (467)
T KOG1221|consen  249 DNLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDNPVTWGDFIELAL  328 (467)
T ss_pred             ccCCCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccccCcccHHHHHHHHH
Confidence             0011111111          122233345799999999999776431  11  12559999997765  5577777777


Q ss_pred             hcCCCCCCC
Q 016901          326 KIPSQRAEP  334 (380)
Q Consensus       326 ~~~~~~~~~  334 (380)
                      +...+.+..
T Consensus       329 ~~~~~~Pl~  337 (467)
T KOG1221|consen  329 RYFEKIPLE  337 (467)
T ss_pred             HhcccCCcc
Confidence            776655443

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=99.77  E-value=3.5e-17  Score=137.71  Aligned_cols=198  Identities=21%  Similarity=0.222  Sum_probs=147.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      |+|.|.||||.+|++++++++++||+|++++|++++....                     +++.+++.|+.|++++.+.
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~---------------------~~~~i~q~Difd~~~~a~~   59 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR---------------------QGVTILQKDIFDLTSLASD   59 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc---------------------ccceeecccccChhhhHhh
Confidence            6799999999999999999999999999999999886543                     5688999999999999999


Q ss_pred             hcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCC----chhhhchhhHHHHHHH
Q 016901          161 LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF----PAAILNLFWGVLLWKR  236 (380)
Q Consensus       161 ~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~----~~~~~~~~~~Y~~sK~  236 (380)
                      +.+.|+||..-+....+   .   ..........+++..+..++.|++.++.+|.-.-..    -+.+.-|..-|...+.
T Consensus        60 l~g~DaVIsA~~~~~~~---~---~~~~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~ey~~~A~~  133 (211)
T COG2910          60 LAGHDAVISAFGAGASD---N---DELHSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYKPEALA  133 (211)
T ss_pred             hcCCceEEEeccCCCCC---h---hHHHHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecCCCCchhHHHHHHH
Confidence            99999999987654211   1   122344577788999999999999999876622111    0112223333666777


Q ss_pred             HHH--HHHH-HCCCCEEEEecCcccCCCcccccccceeeccCCccc----CCCCCHHHHHHHHHHHHhCCCCccCcEEEE
Q 016901          237 KAE--EALI-ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLF----GGQVSNLQVAELLACMAKNRSLSYCKVVEV  309 (380)
Q Consensus       237 ~~E--~~l~-~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~----~~~i~~~DvA~~i~~~l~~~~~~~~~~~ni  309 (380)
                      .+|  +.++ +..++||.|-|..++-|+.   +++.+.++.+.-..    ..+|+..|.|-+++..++++. ..++-|.+
T Consensus       134 ~ae~L~~Lr~~~~l~WTfvSPaa~f~PGe---rTg~yrlggD~ll~n~~G~SrIS~aDYAiA~lDe~E~~~-h~rqRftv  209 (211)
T COG2910         134 QAEFLDSLRAEKSLDWTFVSPAAFFEPGE---RTGNYRLGGDQLLVNAKGESRISYADYAIAVLDELEKPQ-HIRQRFTV  209 (211)
T ss_pred             HHHHHHHHhhccCcceEEeCcHHhcCCcc---ccCceEeccceEEEcCCCceeeeHHHHHHHHHHHHhccc-ccceeeee
Confidence            777  4455 3669999999999999854   45555555443222    157999999999999999988 45555544

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.77  E-value=2.4e-17  Score=156.14  Aligned_cols=207  Identities=17%  Similarity=0.097  Sum_probs=136.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCc----------hhHHHHHHHHHhhhhcccccccCCCCCCceEEE
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV----------QRAENLVQSVKQMKLDGELANKGIQPVEMLELV  147 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  147 (380)
                      +.+|+++||||+++||.++++.|++.|++|+++.|+.          ++.+.+.+.+...+             .++.++
T Consensus         6 l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~-------------~~~~~~   72 (305)
T PRK08303          6 LRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAG-------------GRGIAV   72 (305)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcC-------------CceEEE
Confidence            4678999999999999999999999999999999974          23333333333211             457789


Q ss_pred             EcCCCChhcHHHHh-------cCCCEEEEcc-ccCc-----cccC-----CCCCcchhhHHHHHHHHHHHH----HcCCC
Q 016901          148 ECDLEKRVQIEPAL-------GNASVVICCI-GASE-----KEVF-----DITGPYRIDFQATKNLVDAAT----IAKVN  205 (380)
Q Consensus       148 ~~Dl~d~~~~~~a~-------~~~d~Vi~~A-g~~~-----~~~~-----~~~~~~~~nv~g~~~ll~a~~----~~~v~  205 (380)
                      ++|++|.+++++++       +.+|++|||| |...     ....     ++...+++|+.+...+++++.    +.+-.
T Consensus        73 ~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g  152 (305)
T PRK08303         73 QVDHLVPEQVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGG  152 (305)
T ss_pred             EcCCCCHHHHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCc
Confidence            99999998887665       4689999999 6321     1111     122336788888877776653    33346


Q ss_pred             EEEEEccCCCCCCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcc-c-c-cccce-eecc
Q 016901          206 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDA-Y-K-ETHNI-TLSQ  274 (380)
Q Consensus       206 r~V~~SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~-~-~-~~~~~-~~~~  274 (380)
                      +||++||........+   ......|+.+|.+...+.+       ..|++++.|.||++..+... . . ..... ....
T Consensus       153 ~IV~isS~~~~~~~~~---~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~  229 (305)
T PRK08303        153 LVVEITDGTAEYNATH---YRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVTEENWRDALA  229 (305)
T ss_pred             EEEEECCccccccCcC---CCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccCccchhhhhc
Confidence            8999999643211000   1123469999999987765       36899999999999776311 0 0 00000 0000


Q ss_pred             CCcccCCCCCHHHHHHHHHHHHhCCC
Q 016901          275 EDTLFGGQVSNLQVAELLACMAKNRS  300 (380)
Q Consensus       275 ~~~~~~~~i~~~DvA~~i~~~l~~~~  300 (380)
                      ..........++|+|++++.++.++.
T Consensus       230 ~~p~~~~~~~peevA~~v~fL~s~~~  255 (305)
T PRK08303        230 KEPHFAISETPRYVGRAVAALAADPD  255 (305)
T ss_pred             cccccccCCCHHHHHHHHHHHHcCcc
Confidence            11111233579999999999998763

>PRK05599 hypothetical protein; Provisional

Probab=99.77  E-value=4.9e-17  Score=149.34  Aligned_cols=190  Identities=14%  Similarity=0.112  Sum_probs=135.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      |+++||||+++||.+++++|+ +|++|+++.|+.++.+++.+.++..+            ...+.++.+|++|.++++++
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~------------~~~~~~~~~Dv~d~~~v~~~   67 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRG------------ATSVHVLSFDAQDLDTHREL   67 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcc------------CCceEEEEcccCCHHHHHHH
Confidence            579999999999999999998 59999999999988877766654321            13478899999999887766


Q ss_pred             h-------cCCCEEEEccccCccccC-C-----CCCcchhhHHHHHHHHHH----HHHcC-CCEEEEEccCCCCCCCCch
Q 016901          161 L-------GNASVVICCIGASEKEVF-D-----ITGPYRIDFQATKNLVDA----ATIAK-VNHFIMVSSLGTNKFGFPA  222 (380)
Q Consensus       161 ~-------~~~d~Vi~~Ag~~~~~~~-~-----~~~~~~~nv~g~~~ll~a----~~~~~-v~r~V~~SS~~~~~~~~~~  222 (380)
                      +       +++|++|||||....... +     ..+.+++|+.+..+++.+    +.+.+ -++||++||.......   
T Consensus        68 ~~~~~~~~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~---  144 (246)
T PRK05599         68 VKQTQELAGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRAR---  144 (246)
T ss_pred             HHHHHHhcCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCC---
Confidence            5       468999999996532111 1     112245777777655443    44443 3689999997553211   


Q ss_pred             hhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHHH
Q 016901          223 AILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACM  295 (380)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~  295 (380)
                         .....|+.+|.+.+.+.+       ..|++++.+.||.+.++.....         ...  .....++|+|+.++.+
T Consensus       145 ---~~~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~---------~~~--~~~~~pe~~a~~~~~~  210 (246)
T PRK05599        145 ---RANYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTTGM---------KPA--PMSVYPRDVAAAVVSA  210 (246)
T ss_pred             ---cCCcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhhcCC---------CCC--CCCCCHHHHHHHHHHH
Confidence               123469999999887765       2689999999999987632100         000  0126899999999999


Q ss_pred             HhCCC
Q 016901          296 AKNRS  300 (380)
Q Consensus       296 l~~~~  300 (380)
                      +.+..
T Consensus       211 ~~~~~  215 (246)
T PRK05599        211 ITSSK  215 (246)
T ss_pred             HhcCC
Confidence            98865

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.75  E-value=3.1e-17  Score=156.14  Aligned_cols=217  Identities=14%  Similarity=0.119  Sum_probs=141.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      ++++++||||+++||.++++.|+++| ++|++++|+.++.+++.+.+..             ...++.++.+|++|.+++
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~-------------~~~~~~~~~~Dl~~~~~v   68 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGM-------------PKDSYTIMHLDLGSLDSV   68 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcC-------------CCCeEEEEEcCCCCHHHH
Confidence            46799999999999999999999999 9999999998776665543321             114678899999999887


Q ss_pred             HHHh-------cCCCEEEEccccCccc-------cCCCCCcchhhHHHHHHHHHHH----HHcC--CCEEEEEccCCCCC
Q 016901          158 EPAL-------GNASVVICCIGASEKE-------VFDITGPYRIDFQATKNLVDAA----TIAK--VNHFIMVSSLGTNK  217 (380)
Q Consensus       158 ~~a~-------~~~d~Vi~~Ag~~~~~-------~~~~~~~~~~nv~g~~~ll~a~----~~~~--v~r~V~~SS~~~~~  217 (380)
                      ++++       +++|++|||||.....       ...+...+++|+.|+..+++++    ++.+  .++||++||.....
T Consensus        69 ~~~~~~~~~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~  148 (314)
T TIGR01289        69 RQFVQQFRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNT  148 (314)
T ss_pred             HHHHHHHHHhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCcccc
Confidence            7665       4599999999964211       1122334789999987776654    3332  36999999975532


Q ss_pred             CC----Cc-----------------------hhhhchhhHHHHHHHHHHHHHH----H----CCCCEEEEecCccc-CCC
Q 016901          218 FG----FP-----------------------AAILNLFWGVLLWKRKAEEALI----A----SGLPYTIVRPGGME-RPT  261 (380)
Q Consensus       218 ~~----~~-----------------------~~~~~~~~~Y~~sK~~~E~~l~----~----~g~~~~ivRpg~v~-gp~  261 (380)
                      ..    .+                       .....+...|+.||++...+.+    +    .|+.++.|+||+|. .+.
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l  228 (314)
T TIGR01289       149 NTLAGNVPPKANLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGL  228 (314)
T ss_pred             ccCCCcCCCcccccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcc
Confidence            10    00                       0112345679999999654432    1    47999999999994 432


Q ss_pred             cccccccc-eeec-cCCcccCCCCCHHHHHHHHHHHHhCCCCc-cCcEEE
Q 016901          262 DAYKETHN-ITLS-QEDTLFGGQVSNLQVAELLACMAKNRSLS-YCKVVE  308 (380)
Q Consensus       262 ~~~~~~~~-~~~~-~~~~~~~~~i~~~DvA~~i~~~l~~~~~~-~~~~~n  308 (380)
                      ........ .... .......++.++++.|+.++.++...... .|..|+
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~  278 (314)
T TIGR01289       229 FREHVPLFRTLFPPFQKYITKGYVSEEEAGERLAQVVSDPKLKKSGVYWS  278 (314)
T ss_pred             cccccHHHHHHHHHHHHHHhccccchhhhhhhhHHhhcCcccCCCceeee
Confidence            21000000 0000 00011124688999999999988765432 344443

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK06484 short chain dehydrogenase; Validated

Probab=99.75  E-value=5.6e-17  Score=164.84  Aligned_cols=211  Identities=17%  Similarity=0.151  Sum_probs=146.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      .+++++||||+++||.+++++|+++|++|+++.|+.++..++.+.+.                .++.++.+|++|+++++
T Consensus         4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------------~~~~~~~~D~~~~~~~~   67 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLG----------------PDHHALAMDVSDEAQIR   67 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC----------------CceeEEEeccCCHHHHH
Confidence            56899999999999999999999999999999999877665543221                45778999999998887


Q ss_pred             HHh-------cCCCEEEEccccCcc--------ccCCCCCcchhhHHHHHHHHHHHHH----cCCC-EEEEEccCCCCCC
Q 016901          159 PAL-------GNASVVICCIGASEK--------EVFDITGPYRIDFQATKNLVDAATI----AKVN-HFIMVSSLGTNKF  218 (380)
Q Consensus       159 ~a~-------~~~d~Vi~~Ag~~~~--------~~~~~~~~~~~nv~g~~~ll~a~~~----~~v~-r~V~~SS~~~~~~  218 (380)
                      +++       +++|+||||||....        +..++...+++|+.++..+++++..    .+.+ ++|++||......
T Consensus        68 ~~~~~~~~~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~  147 (520)
T PRK06484         68 EGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVA  147 (520)
T ss_pred             HHHHHHHHHhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCC
Confidence            766       468999999986321        1112344588999999988887753    3333 8999999765332


Q ss_pred             CCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccc-cceeec--cCCcccCCCCCHHHH
Q 016901          219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-HNITLS--QEDTLFGGQVSNLQV  288 (380)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~-~~~~~~--~~~~~~~~~i~~~Dv  288 (380)
                      .      .....|+.+|.+.+.+.+       ..+++++.|+||.+.++....... ......  ......+....++|+
T Consensus       148 ~------~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  221 (520)
T PRK06484        148 L------PKRTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRIPLGRLGRPEEI  221 (520)
T ss_pred             C------CCCchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhcCCCCCCcCHHHH
Confidence            1      123469999999997765       368999999999997764211000 000000  000112235689999


Q ss_pred             HHHHHHHHhCCC-CccCcEEEEec
Q 016901          289 AELLACMAKNRS-LSYCKVVEVIA  311 (380)
Q Consensus       289 A~~i~~~l~~~~-~~~~~~~ni~~  311 (380)
                      |+++..++.... ...+.++.+.+
T Consensus       222 a~~v~~l~~~~~~~~~G~~~~~~g  245 (520)
T PRK06484        222 AEAVFFLASDQASYITGSTLVVDG  245 (520)
T ss_pred             HHHHHHHhCccccCccCceEEecC
Confidence            999999887532 23455555443

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.75  E-value=1.1e-16  Score=141.96  Aligned_cols=181  Identities=18%  Similarity=0.129  Sum_probs=132.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      |+++||||+|+||+++++.|+++ ++|++++|+..                              .+++|++|.++++++
T Consensus         1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~------------------------------~~~~D~~~~~~~~~~   49 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG------------------------------DVQVDITDPASIRAL   49 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC------------------------------ceEecCCChHHHHHH
Confidence            47999999999999999999999 99999988742                              357899999988887


Q ss_pred             hc---CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHHHc--CCCEEEEEccCCCCCCCCchhhhchhh
Q 016901          161 LG---NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFPAAILNLFW  229 (380)
Q Consensus       161 ~~---~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~~~--~v~r~V~~SS~~~~~~~~~~~~~~~~~  229 (380)
                      ++   ++|+||||||......      .++...+++|+.++.++++++...  +..+|+++||.......      ....
T Consensus        50 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~~------~~~~  123 (199)
T PRK07578         50 FEKVGKVDAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEPI------PGGA  123 (199)
T ss_pred             HHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCCCC------CCch
Confidence            75   6899999999643211      123344778999999999887542  23579999987653211      2334


Q ss_pred             HHHHHHHHHHHHHH------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHHHHhCCCCcc
Q 016901          230 GVLLWKRKAEEALI------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSY  303 (380)
Q Consensus       230 ~Y~~sK~~~E~~l~------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~~~~~  303 (380)
                      .|+.+|...+.+.+      ..|++++.|+||++..+......    .+.     ....++++|+|+++..+++..  ..
T Consensus       124 ~Y~~sK~a~~~~~~~la~e~~~gi~v~~i~Pg~v~t~~~~~~~----~~~-----~~~~~~~~~~a~~~~~~~~~~--~~  192 (199)
T PRK07578        124 SAATVNGALEGFVKAAALELPRGIRINVVSPTVLTESLEKYGP----FFP-----GFEPVPAARVALAYVRSVEGA--QT  192 (199)
T ss_pred             HHHHHHHHHHHHHHHHHHHccCCeEEEEEcCCcccCchhhhhh----cCC-----CCCCCCHHHHHHHHHHHhccc--ee
Confidence            69999999887665      36899999999999765321110    000     114689999999999999764  34


Q ss_pred             CcEEEE
Q 016901          304 CKVVEV  309 (380)
Q Consensus       304 ~~~~ni  309 (380)
                      +++|++
T Consensus       193 g~~~~~  198 (199)
T PRK07578        193 GEVYKV  198 (199)
T ss_pred             eEEecc
Confidence            677765

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.74  E-value=1.2e-16  Score=144.63  Aligned_cols=185  Identities=16%  Similarity=0.091  Sum_probs=132.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      +++++||||+|+||++++++|+++|++|++++|++.+.+.+.+                  ..++.++.+|++|.+++++
T Consensus         1 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~------------------~~~~~~~~~D~~d~~~~~~   62 (225)
T PRK08177          1 KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQA------------------LPGVHIEKLDMNDPASLDQ   62 (225)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHh------------------ccccceEEcCCCCHHHHHH
Confidence            3689999999999999999999999999999999876544321                  1457788999999988877


Q ss_pred             Hhc-----CCCEEEEccccCccc--------cCCCCCcchhhHHHHHHHHHHHHHc---CCCEEEEEccCCCCCCCCchh
Q 016901          160 ALG-----NASVVICCIGASEKE--------VFDITGPYRIDFQATKNLVDAATIA---KVNHFIMVSSLGTNKFGFPAA  223 (380)
Q Consensus       160 a~~-----~~d~Vi~~Ag~~~~~--------~~~~~~~~~~nv~g~~~ll~a~~~~---~v~r~V~~SS~~~~~~~~~~~  223 (380)
                      +++     ++|+||||||.....        ..+....+++|+.++..+++++...   +..+++++||........   
T Consensus        63 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~~~~~---  139 (225)
T PRK08177         63 LLQRLQGQRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGSVELP---  139 (225)
T ss_pred             HHHHhhcCCCCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCccccccC---
Confidence            664     589999999864221        1123344778999999888877532   335788898853321111   


Q ss_pred             hhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHHHH
Q 016901          224 ILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMA  296 (380)
Q Consensus       224 ~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l  296 (380)
                      .......|+.+|.+.+.+++.       .+++++.|+||++-++...            .   ...++....+..++..+
T Consensus       140 ~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~~~------------~---~~~~~~~~~~~~~~~~~  204 (225)
T PRK08177        140 DGGEMPLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDMGG------------D---NAPLDVETSVKGLVEQI  204 (225)
T ss_pred             CCCCccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecCCCC------------C---CCCCCHHHHHHHHHHHH
Confidence            112334699999999988762       5799999999999776321            0   01356667777777777


Q ss_pred             hCCC
Q 016901          297 KNRS  300 (380)
Q Consensus       297 ~~~~  300 (380)
                      ++..
T Consensus       205 ~~~~  208 (225)
T PRK08177        205 EAAS  208 (225)
T ss_pred             HhCC
Confidence            6654

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.74  E-value=1e-16  Score=160.02  Aligned_cols=214  Identities=16%  Similarity=0.079  Sum_probs=144.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      ..+++++||||+|+||..+++.|+++|++|++++|.... +.+.+....               -+..++.+|++|.+++
T Consensus       208 ~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~-~~l~~~~~~---------------~~~~~~~~Dv~~~~~~  271 (450)
T PRK08261        208 LAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAG-EALAAVANR---------------VGGTALALDITAPDAP  271 (450)
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccH-HHHHHHHHH---------------cCCeEEEEeCCCHHHH
Confidence            467899999999999999999999999999999885322 122211111               1345788999999887


Q ss_pred             HHHhc-------CCCEEEEccccCccc------cCCCCCcchhhHHHHHHHHHHHHHcC----CCEEEEEccCCCCCCCC
Q 016901          158 EPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATIAK----VNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~~~------~~~~~~~~~~nv~g~~~ll~a~~~~~----v~r~V~~SS~~~~~~~~  220 (380)
                      +++++       ++|+||||||.....      ..++...+++|+.|+.++++++....    -++||++||....... 
T Consensus       272 ~~~~~~~~~~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~-  350 (450)
T PRK08261        272 ARIAEHLAERHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGN-  350 (450)
T ss_pred             HHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCC-
Confidence            77653       689999999965322      12233447899999999999987643    2689999997543211 


Q ss_pred             chhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHH
Q 016901          221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA  293 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~  293 (380)
                           .....|+.+|...+.+++       ..|++++.|.||.+..+........................++|+|+++.
T Consensus       351 -----~~~~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~l~~~~~p~dva~~~~  425 (450)
T PRK08261        351 -----RGQTNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAAIPFATREAGRRMNSLQQGGLPVDVAETIA  425 (450)
T ss_pred             -----CCChHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhccchhHHHHHhhcCCcCCCCCHHHHHHHHH
Confidence                 123469999998776654       36899999999998654211000000000001111222356889999999


Q ss_pred             HHHhCCC-CccCcEEEEecCC
Q 016901          294 CMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       294 ~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      .++.... ...++++.+.++.
T Consensus       426 ~l~s~~~~~itG~~i~v~g~~  446 (450)
T PRK08261        426 WLASPASGGVTGNVVRVCGQS  446 (450)
T ss_pred             HHhChhhcCCCCCEEEECCCc
Confidence            9886532 3457888887754

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.74  E-value=1.5e-16  Score=155.02  Aligned_cols=183  Identities=16%  Similarity=0.133  Sum_probs=130.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++|+|+||||+|+||++++++|+++|++|++++|+.++......   ..             ..++..+.+|++|.+++
T Consensus       176 l~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~---~~-------------~~~v~~v~~Dvsd~~~v  239 (406)
T PRK07424        176 LKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEIN---GE-------------DLPVKTLHWQVGQEAAL  239 (406)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh---hc-------------CCCeEEEEeeCCCHHHH
Confidence            467899999999999999999999999999999998765432211   00             03467889999999999


Q ss_pred             HHHhcCCCEEEEccccCcccc---CCCCCcchhhHHHHHHHHHHHHH----cC----CCEEEEEccCCCCCCCCchhhhc
Q 016901          158 EPALGNASVVICCIGASEKEV---FDITGPYRIDFQATKNLVDAATI----AK----VNHFIMVSSLGTNKFGFPAAILN  226 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag~~~~~~---~~~~~~~~~nv~g~~~ll~a~~~----~~----v~r~V~~SS~~~~~~~~~~~~~~  226 (380)
                      .+.++++|++|||||......   .+....+++|+.|+.++++++..    .+    ...+|++|+.+..    +    .
T Consensus       240 ~~~l~~IDiLInnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ssa~~~----~----~  311 (406)
T PRK07424        240 AELLEKVDILIINHGINVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSEAEVN----P----A  311 (406)
T ss_pred             HHHhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcccccc----C----C
Confidence            999999999999998643211   12345588999999999988742    22    1235565543221    1    1


Q ss_pred             hhhHHHHHHHHHHHHHH----HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHHHHhCCC
Q 016901          227 LFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRS  300 (380)
Q Consensus       227 ~~~~Y~~sK~~~E~~l~----~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~~  300 (380)
                      ....|++||.+.+.+..    +.++.+..+.||.+..+..              .  .+.++++|+|+.++.+++++.
T Consensus       312 ~~~~Y~ASKaAl~~l~~l~~~~~~~~I~~i~~gp~~t~~~--------------~--~~~~spe~vA~~il~~i~~~~  373 (406)
T PRK07424        312 FSPLYELSKRALGDLVTLRRLDAPCVVRKLILGPFKSNLN--------------P--IGVMSADWVAKQILKLAKRDF  373 (406)
T ss_pred             CchHHHHHHHHHHHHHHHHHhCCCCceEEEEeCCCcCCCC--------------c--CCCCCHHHHHHHHHHHHHCCC
Confidence            12359999999987542    2566677777776543210              0  134899999999999998876

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.73  E-value=5.4e-16  Score=141.10  Aligned_cols=195  Identities=14%  Similarity=0.131  Sum_probs=143.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      ..++.||||||++++|+.++.+++++|..+++.+.+.+...+..+.+++.              +++....+|++|.+++
T Consensus        36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~--------------g~~~~y~cdis~~eei  101 (300)
T KOG1201|consen   36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKI--------------GEAKAYTCDISDREEI  101 (300)
T ss_pred             ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhc--------------CceeEEEecCCCHHHH
Confidence            36789999999999999999999999999999999998887777766543              3688999999998776


Q ss_pred             HHHh-------cCCCEEEEccccCccccC------CCCCcchhhHHHHH----HHHHHHHHcCCCEEEEEccCCCCCCCC
Q 016901          158 EPAL-------GNASVVICCIGASEKEVF------DITGPYRIDFQATK----NLVDAATIAKVNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       158 ~~a~-------~~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~----~ll~a~~~~~v~r~V~~SS~~~~~~~~  220 (380)
                      .+..       +++|++|||||.......      ..+..+++|+.|..    +++..+.+.+-+|+|.++|+.....  
T Consensus       102 ~~~a~~Vk~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g--  179 (300)
T KOG1201|consen  102 YRLAKKVKKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFG--  179 (300)
T ss_pred             HHHHHHHHHhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccC--
Confidence            5543       679999999997643221      22334889988854    5556667777789999999755221  


Q ss_pred             chhhhchhhHHHHHHHHHHHHHH-------H---CCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHH
Q 016901          221 PAAILNLFWGVLLWKRKAEEALI-------A---SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAE  290 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~---~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~  290 (380)
                          ......|++||.++..+.+       +   .|++.|.|.|+.+-...  +..      ......+...+.++.+|+
T Consensus       180 ----~~gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgm--f~~------~~~~~~l~P~L~p~~va~  247 (300)
T KOG1201|consen  180 ----PAGLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGM--FDG------ATPFPTLAPLLEPEYVAK  247 (300)
T ss_pred             ----CccchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccc--cCC------CCCCccccCCCCHHHHHH
Confidence                1233469999999864432       2   67999999999986321  111      112222335689999999


Q ss_pred             HHHHHHhCCC
Q 016901          291 LLACMAKNRS  300 (380)
Q Consensus       291 ~i~~~l~~~~  300 (380)
                      .+++++...+
T Consensus       248 ~Iv~ai~~n~  257 (300)
T KOG1201|consen  248 RIVEAILTNQ  257 (300)
T ss_pred             HHHHHHHcCC
Confidence            9999998766

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.72  E-value=9.2e-16  Score=142.15  Aligned_cols=222  Identities=19%  Similarity=0.156  Sum_probs=155.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ++.+|+++||||+.+||++++++|++.|++|++..|+.+..++....+...+..          ..++..+.+|+++.++
T Consensus         5 ~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~----------~~~~~~~~~Dv~~~~~   74 (270)
T KOG0725|consen    5 RLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYT----------GGKVLAIVCDVSKEVD   74 (270)
T ss_pred             cCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCC----------CCeeEEEECcCCCHHH
Confidence            468899999999999999999999999999999999999887777665543321          2678999999998766


Q ss_pred             HHHHh--------cCCCEEEEccccCcccc-------CCCCCcchhhHHH-HHHHHHHHH----HcCCCEEEEEccCCCC
Q 016901          157 IEPAL--------GNASVVICCIGASEKEV-------FDITGPYRIDFQA-TKNLVDAAT----IAKVNHFIMVSSLGTN  216 (380)
Q Consensus       157 ~~~a~--------~~~d~Vi~~Ag~~~~~~-------~~~~~~~~~nv~g-~~~ll~a~~----~~~v~r~V~~SS~~~~  216 (380)
                      .++++        +++|++|||||......       ..+...+++|+.| +..+..++.    +.+-..++++||.+..
T Consensus        75 ~~~l~~~~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~  154 (270)
T KOG0725|consen   75 VEKLVEFAVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGV  154 (270)
T ss_pred             HHHHHHHHHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccc
Confidence            55543        56999999999654321       2344558899995 555555543    3345689999997654


Q ss_pred             CCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccc-cc---cceee---ccCCcccCCC
Q 016901          217 KFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-ET---HNITL---SQEDTLFGGQ  282 (380)
Q Consensus       217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~-~~---~~~~~---~~~~~~~~~~  282 (380)
                      ....+.    + ..|+.+|.+.+++.+       .+|++++.|-||.+.++..... ..   .....   .......+..
T Consensus       155 ~~~~~~----~-~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p~gr~  229 (270)
T KOG0725|consen  155 GPGPGS----G-VAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVPLGRV  229 (270)
T ss_pred             cCCCCC----c-ccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhccccccccCCc
Confidence            322111    1 369999999998876       3899999999999988741100 00   00100   1122234456


Q ss_pred             CCHHHHHHHHHHHHhCCC-CccCcEEEEecCC
Q 016901          283 VSNLQVAELLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       283 i~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      ..++|+|..+..++.+.. +..|+.+-+.++.
T Consensus       230 g~~~eva~~~~fla~~~asyitG~~i~vdgG~  261 (270)
T KOG0725|consen  230 GTPEEVAEAAAFLASDDASYITGQTIIVDGGF  261 (270)
T ss_pred             cCHHHHHHhHHhhcCcccccccCCEEEEeCCE
Confidence            789999999999988753 3456666555554

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.71  E-value=3.7e-16  Score=142.20  Aligned_cols=199  Identities=15%  Similarity=0.108  Sum_probs=134.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G--~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      |+|+||||+|+||++++++|+++|  +.|+...|+....  .                   ...++.++++|++|.++++
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~--~-------------------~~~~~~~~~~Dls~~~~~~   59 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD--F-------------------QHDNVQWHALDVTDEAEIK   59 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc--c-------------------ccCceEEEEecCCCHHHHH
Confidence            579999999999999999999985  5666666654321  0                   0157889999999988766


Q ss_pred             HH---hcCCCEEEEccccCccccC------------CCCCcchhhHHHHHHHHHHHHH----cCCCEEEEEccCCCCCCC
Q 016901          159 PA---LGNASVVICCIGASEKEVF------------DITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       159 ~a---~~~~d~Vi~~Ag~~~~~~~------------~~~~~~~~nv~g~~~ll~a~~~----~~v~r~V~~SS~~~~~~~  219 (380)
                      ++   ++++|+||||||.......            .+...+++|+.+...+++++..    .+.++++++||.......
T Consensus        60 ~~~~~~~~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~  139 (235)
T PRK09009         60 QLSEQFTQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISD  139 (235)
T ss_pred             HHHHhcCCCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeeccccccc
Confidence            64   4679999999996532110            1123467898888877776643    344689999874321111


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHHH---------CCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHH
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALIA---------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAE  290 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~---------~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~  290 (380)
                      .   .......|+.+|+..+.+++.         .+++++.|.||.+.++.....       .. ....+.+++++|+|+
T Consensus       140 ~---~~~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~-------~~-~~~~~~~~~~~~~a~  208 (235)
T PRK09009        140 N---RLGGWYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPF-------QQ-NVPKGKLFTPEYVAQ  208 (235)
T ss_pred             C---CCCCcchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcch-------hh-ccccCCCCCHHHHHH
Confidence            1   112345799999999987652         478999999999987643210       01 111234689999999


Q ss_pred             HHHHHHhCCC-CccCcEEEEec
Q 016901          291 LLACMAKNRS-LSYCKVVEVIA  311 (380)
Q Consensus       291 ~i~~~l~~~~-~~~~~~~ni~~  311 (380)
                      +++.++.... ...+..+.+-+
T Consensus       209 ~~~~l~~~~~~~~~g~~~~~~g  230 (235)
T PRK09009        209 CLLGIIANATPAQSGSFLAYDG  230 (235)
T ss_pred             HHHHHHHcCChhhCCcEEeeCC
Confidence            9999998764 23455554443

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.71  E-value=1.1e-15  Score=138.78  Aligned_cols=186  Identities=8%  Similarity=-0.007  Sum_probs=131.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++++++||||+++||++++++|+++|++|+++.|+.++.++..+.++..+             .++..+.+|++|++++
T Consensus         3 ~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~-------------~~~~~~~~D~~~~~~~   69 (227)
T PRK08862          3 IKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALT-------------DNVYSFQLKDFSQESI   69 (227)
T ss_pred             CCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC-------------CCeEEEEccCCCHHHH
Confidence            357899999999999999999999999999999999988777666554321             4577889999999888


Q ss_pred             HHHh-------c-CCCEEEEccccCcc-ccC------CCCCcchhhHHHHHHHHHH----HHHcC-CCEEEEEccCCCCC
Q 016901          158 EPAL-------G-NASVVICCIGASEK-EVF------DITGPYRIDFQATKNLVDA----ATIAK-VNHFIMVSSLGTNK  217 (380)
Q Consensus       158 ~~a~-------~-~~d~Vi~~Ag~~~~-~~~------~~~~~~~~nv~g~~~ll~a----~~~~~-v~r~V~~SS~~~~~  217 (380)
                      ++++       + .+|++|||||.... ...      ++.+.+++|+.+...++++    +.+.+ .+++|++||.....
T Consensus        70 ~~~~~~~~~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~  149 (227)
T PRK08862         70 RHLFDAIEQQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDHQ  149 (227)
T ss_pred             HHHHHHHHHHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCCC
Confidence            7665       4 69999999974321 111      1122355677776655544    34433 46899999965421


Q ss_pred             CCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCC-HHHHH
Q 016901          218 FGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVS-NLQVA  289 (380)
Q Consensus       218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~-~~DvA  289 (380)
                               ....|+.+|.+.+.+.+       .+|++++.|.||++.++......              .|.. .+|++
T Consensus       150 ---------~~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~~~~~~--------------~~~~~~~~~~  206 (227)
T PRK08862        150 ---------DLTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSANGELDAV--------------HWAEIQDELI  206 (227)
T ss_pred             ---------CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCCccCHH--------------HHHHHHHHHH
Confidence                     23469999999987765       37899999999999876211000              0111 16788


Q ss_pred             HHHHHHHhCC
Q 016901          290 ELLACMAKNR  299 (380)
Q Consensus       290 ~~i~~~l~~~  299 (380)
                      .+...++.+.
T Consensus       207 ~~~~~l~~~~  216 (227)
T PRK08862        207 RNTEYIVANE  216 (227)
T ss_pred             hheeEEEecc
Confidence            8877777644

>PLN00015 protochlorophyllide reductase

Probab=99.70  E-value=3.5e-16  Score=148.51  Aligned_cols=212  Identities=17%  Similarity=0.145  Sum_probs=137.0

Q ss_pred             EEEcCCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHHh-
Q 016901           84 FVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPAL-  161 (380)
Q Consensus        84 lVtGatG~iG~~lv~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a~-  161 (380)
                      +||||+++||.+++++|+++| ++|++..|+.++..+..+.+..             ...++.++.+|++|.+++++++ 
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~-------------~~~~~~~~~~Dl~d~~~v~~~~~   67 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGM-------------PKDSYTVMHLDLASLDSVRQFVD   67 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcC-------------CCCeEEEEEecCCCHHHHHHHHH
Confidence            699999999999999999999 9999999998776655443321             1146888999999998887665 


Q ss_pred             ------cCCCEEEEccccCccc-------cCCCCCcchhhHHHHHHHHHHH----HHcC--CCEEEEEccCCCCCC---C
Q 016901          162 ------GNASVVICCIGASEKE-------VFDITGPYRIDFQATKNLVDAA----TIAK--VNHFIMVSSLGTNKF---G  219 (380)
Q Consensus       162 ------~~~d~Vi~~Ag~~~~~-------~~~~~~~~~~nv~g~~~ll~a~----~~~~--v~r~V~~SS~~~~~~---~  219 (380)
                            +.+|++|||||.....       ..+++..+++|+.|+..+++++    ++.+  .++||++||......   +
T Consensus        68 ~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~  147 (308)
T PLN00015         68 NFRRSGRPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAG  147 (308)
T ss_pred             HHHhcCCCCCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccc
Confidence                  3589999999964221       1123345789999977776554    4443  469999999754211   0


Q ss_pred             --Cc------------------------hhhhchhhHHHHHHHHHHHHHH----H----CCCCEEEEecCccc-CCCccc
Q 016901          220 --FP------------------------AAILNLFWGVLLWKRKAEEALI----A----SGLPYTIVRPGGME-RPTDAY  264 (380)
Q Consensus       220 --~~------------------------~~~~~~~~~Y~~sK~~~E~~l~----~----~g~~~~ivRpg~v~-gp~~~~  264 (380)
                        .+                        .........|+.||.+.+.+.+    +    .|+.++.|+||+|. .+....
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~  227 (308)
T PLN00015        148 NVPPKANLGDLRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFRE  227 (308)
T ss_pred             cCCCccchhhhhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCcccccc
Confidence              00                        0011345679999998554432    2    48999999999994 342210


Q ss_pred             ccccceee-c-cCCcccCCCCCHHHHHHHHHHHHhCCCC-ccCcEEE
Q 016901          265 KETHNITL-S-QEDTLFGGQVSNLQVAELLACMAKNRSL-SYCKVVE  308 (380)
Q Consensus       265 ~~~~~~~~-~-~~~~~~~~~i~~~DvA~~i~~~l~~~~~-~~~~~~n  308 (380)
                      ........ . ......+...++++.|+.++.++.+... ..|..|+
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~l~~~~~~~~~G~~~~  274 (308)
T PLN00015        228 HIPLFRLLFPPFQKYITKGYVSEEEAGKRLAQVVSDPSLTKSGVYWS  274 (308)
T ss_pred             ccHHHHHHHHHHHHHHhcccccHHHhhhhhhhhccccccCCCccccc
Confidence            00000000 0 0001122457899999999998876442 2344444

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.70  E-value=1.9e-15  Score=142.44  Aligned_cols=228  Identities=11%  Similarity=0.070  Sum_probs=143.9

Q ss_pred             CCCCeEEEEcC--CChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCC--CC
Q 016901           78 KDDNLAFVAGA--TGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDL--EK  153 (380)
Q Consensus        78 ~~~~~vlVtGa--tG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl--~d  153 (380)
                      +++|++|||||  +.+||.++++.|++.|++|++ .|+..+++.+...+...++.................+.+|+  ++
T Consensus         7 l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   85 (303)
T PLN02730          7 LRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFDT   85 (303)
T ss_pred             CCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecCc
Confidence            57899999999  799999999999999999988 78877777666555432110000000000001245788888  43


Q ss_pred             hh------------------cHHHHh-------cCCCEEEEccccCcc--------ccCCCCCcchhhHHHHHHHHHHHH
Q 016901          154 RV------------------QIEPAL-------GNASVVICCIGASEK--------EVFDITGPYRIDFQATKNLVDAAT  200 (380)
Q Consensus       154 ~~------------------~~~~a~-------~~~d~Vi~~Ag~~~~--------~~~~~~~~~~~nv~g~~~ll~a~~  200 (380)
                      .+                  ++++++       +.+|++|||||....        +..++...+++|+.+...+++++.
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~  165 (303)
T PLN02730         86 PEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFG  165 (303)
T ss_pred             cccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            33                  444444       468999999974311        112344558899999888887764


Q ss_pred             Hc--CCCEEEEEccCCCCCCCCchhhhchh-hHHHHHHHHHHHHHH-------H-CCCCEEEEecCcccCCCccccc-cc
Q 016901          201 IA--KVNHFIMVSSLGTNKFGFPAAILNLF-WGVLLWKRKAEEALI-------A-SGLPYTIVRPGGMERPTDAYKE-TH  268 (380)
Q Consensus       201 ~~--~v~r~V~~SS~~~~~~~~~~~~~~~~-~~Y~~sK~~~E~~l~-------~-~g~~~~ivRpg~v~gp~~~~~~-~~  268 (380)
                      ..  .-.++|++||.......      ... ..|+.+|.+.+.+.+       . +|++++.|.||++..+...... ..
T Consensus       166 p~m~~~G~II~isS~a~~~~~------p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~~~~~  239 (303)
T PLN02730        166 PIMNPGGASISLTYIASERII------PGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAIGFID  239 (303)
T ss_pred             HHHhcCCEEEEEechhhcCCC------CCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhcccccH
Confidence            32  12689999997553211      112 359999999997765       2 5899999999999876321100 00


Q ss_pred             c-eeeccCCcccCCCCCHHHHHHHHHHHHhCCC-CccCcEEEEecC
Q 016901          269 N-ITLSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE  312 (380)
Q Consensus       269 ~-~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~  312 (380)
                      . ..........+.+..++|+|.+++.++.... ...++++.+-++
T Consensus       240 ~~~~~~~~~~pl~r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG  285 (303)
T PLN02730        240 DMIEYSYANAPLQKELTADEVGNAAAFLASPLASAITGATIYVDNG  285 (303)
T ss_pred             HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEECCC
Confidence            0 0000011112345789999999999997543 345676666554

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.68  E-value=6.9e-16  Score=130.93  Aligned_cols=214  Identities=21%  Similarity=0.191  Sum_probs=146.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      +.+.++||||+.+||++++..|+++|++|.+.+++...+++....+..              +.+...+.+|+.+.++++
T Consensus        13 ~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g--------------~~~h~aF~~DVS~a~~v~   78 (256)
T KOG1200|consen   13 MSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGG--------------YGDHSAFSCDVSKAHDVQ   78 (256)
T ss_pred             hcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCC--------------CCccceeeeccCcHHHHH
Confidence            567899999999999999999999999999999988877666543322              146677899999987666


Q ss_pred             HHh-------cCCCEEEEccccCccc------cCCCCCcchhhHHHHHHHHHHHHHc----C--CCEEEEEccCCCCCCC
Q 016901          159 PAL-------GNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATIA----K--VNHFIMVSSLGTNKFG  219 (380)
Q Consensus       159 ~a~-------~~~d~Vi~~Ag~~~~~------~~~~~~~~~~nv~g~~~ll~a~~~~----~--v~r~V~~SS~~~~~~~  219 (380)
                      ..+       +.+++++||||.....      ..+|.+.+.+|+.|+..+.+++.+.    +  .-+||++||+-.....
T Consensus        79 ~~l~e~~k~~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN  158 (256)
T KOG1200|consen   79 NTLEEMEKSLGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGN  158 (256)
T ss_pred             HHHHHHHHhcCCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhccccc
Confidence            543       5689999999976432      2355666889999998888776543    2  2389999997432221


Q ss_pred             CchhhhchhhHHHHHH--------HHHHHHHHHCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHH
Q 016901          220 FPAAILNLFWGVLLWK--------RKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAEL  291 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK--------~~~E~~l~~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~  291 (380)
                      ..      ...|.++|        .++.+ +...++++++|.||+|-.|...........--.+....+..-..+|+|..
T Consensus       159 ~G------QtnYAAsK~GvIgftktaArE-la~knIrvN~VlPGFI~tpMT~~mp~~v~~ki~~~iPmgr~G~~EevA~~  231 (256)
T KOG1200|consen  159 FG------QTNYAASKGGVIGFTKTAARE-LARKNIRVNVVLPGFIATPMTEAMPPKVLDKILGMIPMGRLGEAEEVANL  231 (256)
T ss_pred             cc------chhhhhhcCceeeeeHHHHHH-HhhcCceEeEeccccccChhhhhcCHHHHHHHHccCCccccCCHHHHHHH
Confidence            11      12466665        44433 44589999999999998884321110000000111122345678999999


Q ss_pred             HHHHHhCCC-CccCcEEEEecCC
Q 016901          292 LACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       292 i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      +..++.+.. +..+..+++.++-
T Consensus       232 V~fLAS~~ssYiTG~t~evtGGl  254 (256)
T KOG1200|consen  232 VLFLASDASSYITGTTLEVTGGL  254 (256)
T ss_pred             HHHHhccccccccceeEEEeccc
Confidence            999885533 3467788887763

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.68  E-value=7.5e-16  Score=132.79  Aligned_cols=162  Identities=19%  Similarity=0.177  Sum_probs=119.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      ++++||||+|+||.+++++|+++|+ .|+++.|+..........+..+..          ...++.++.+|+++.+++.+
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~----------~~~~~~~~~~D~~~~~~~~~   70 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEA----------LGAEVTVVACDVADRAALAA   70 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHh----------cCCeEEEEECCCCCHHHHHH
Confidence            4699999999999999999999996 688888876543322211111110          01567889999999887777


Q ss_pred             Hh-------cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCCchhhhc
Q 016901          160 AL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILN  226 (380)
Q Consensus       160 a~-------~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~~~~~~  226 (380)
                      ++       ..+|.|||++|......      .++...+++|+.++.++++++.+.+.+++|++||.+.....      .
T Consensus        71 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~~~~------~  144 (180)
T smart00822       71 ALAAIPARLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGVLGN------P  144 (180)
T ss_pred             HHHHHHHHcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHHhcCC------C
Confidence            65       34799999998543211      12344578999999999999988788899999997553221      2


Q ss_pred             hhhHHHHHHHHHHHHHH---HCCCCEEEEecCccc
Q 016901          227 LFWGVLLWKRKAEEALI---ASGLPYTIVRPGGME  258 (380)
Q Consensus       227 ~~~~Y~~sK~~~E~~l~---~~g~~~~ivRpg~v~  258 (380)
                      ....|+.+|...+.+++   ..+++++.+.||.+.
T Consensus       145 ~~~~y~~sk~~~~~~~~~~~~~~~~~~~~~~g~~~  179 (180)
T smart00822      145 GQANYAAANAFLDALAAHRRARGLPATSINWGAWA  179 (180)
T ss_pred             CchhhHHHHHHHHHHHHHHHhcCCceEEEeecccc
Confidence            23469999999998865   478999999999874

It uses NADPH to reduce the keto group to a hydroxy group.

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.66  E-value=3.6e-16  Score=143.03  Aligned_cols=206  Identities=19%  Similarity=0.220  Sum_probs=143.1

Q ss_pred             cCC--ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH----
Q 016901           87 GAT--GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA----  160 (380)
Q Consensus        87 Gat--G~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a----  160 (380)
                      |++  ++||++++++|+++|++|++..|+.++.....+.+.+.              ....++.+|++|.++++++    
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~--------------~~~~~~~~D~~~~~~v~~~~~~~   66 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKE--------------YGAEVIQCDLSDEESVEALFDEA   66 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHH--------------TTSEEEESCTTSHHHHHHHHHHH
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHH--------------cCCceEeecCcchHHHHHHHHHH
Confidence            666  99999999999999999999999998754444433321              1244699999998887776    


Q ss_pred             ---h-cCCCEEEEccccCcc----cc------CCCCCcchhhHHHHHHHHHHHHHc--CCCEEEEEccCCCCCCCCchhh
Q 016901          161 ---L-GNASVVICCIGASEK----EV------FDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFPAAI  224 (380)
Q Consensus       161 ---~-~~~d~Vi~~Ag~~~~----~~------~~~~~~~~~nv~g~~~ll~a~~~~--~v~r~V~~SS~~~~~~~~~~~~  224 (380)
                         + +.+|++|||+|....    ..      .++...+++|+.+...+++++...  .-+++|++||.+....      
T Consensus        67 ~~~~~g~iD~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~------  140 (241)
T PF13561_consen   67 VERFGGRIDILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRP------  140 (241)
T ss_dssp             HHHHCSSESEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSB------
T ss_pred             HhhcCCCeEEEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhccc------
Confidence               4 568999999986543    11      122334778888888888777431  1258999999865332      


Q ss_pred             hchhhHHHHHHHHHHHHHH-------H-CCCCEEEEecCcccCCCccccc--ccceeeccCCcccCCCCCHHHHHHHHHH
Q 016901          225 LNLFWGVLLWKRKAEEALI-------A-SGLPYTIVRPGGMERPTDAYKE--THNITLSQEDTLFGGQVSNLQVAELLAC  294 (380)
Q Consensus       225 ~~~~~~Y~~sK~~~E~~l~-------~-~g~~~~ivRpg~v~gp~~~~~~--~~~~~~~~~~~~~~~~i~~~DvA~~i~~  294 (380)
                      ......|+.+|.+.+.+.+       . +|++++.|.||++.++......  .............+.+..++|+|+++..
T Consensus       141 ~~~~~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl~r~~~~~evA~~v~f  220 (241)
T PF13561_consen  141 MPGYSAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKRIPLGRLGTPEEVANAVLF  220 (241)
T ss_dssp             STTTHHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHSTTSSHBEHHHHHHHHHH
T ss_pred             CccchhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhccccccchhhhhhhhhccCCCcCHHHHHHHHHH
Confidence            1233479999999998876       4 6999999999999876321110  0001111112223345799999999999


Q ss_pred             HHhCCC-CccCcEEEEecC
Q 016901          295 MAKNRS-LSYCKVVEVIAE  312 (380)
Q Consensus       295 ~l~~~~-~~~~~~~ni~~~  312 (380)
                      ++.+.. ...|+++.+-+|
T Consensus       221 L~s~~a~~itG~~i~vDGG  239 (241)
T PF13561_consen  221 LASDAASYITGQVIPVDGG  239 (241)
T ss_dssp             HHSGGGTTGTSEEEEESTT
T ss_pred             HhCccccCccCCeEEECCC
Confidence            998752 357888877665

...

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.66  E-value=2.9e-15  Score=128.79  Aligned_cols=144  Identities=19%  Similarity=0.227  Sum_probs=112.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCC--chhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRS--VQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G-~~V~~l~R~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      |+++||||+|.||+.++++|+++| +.|+++.|+  .+...++.+.++..+             .++.++++|+++.+++
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~-------------~~~~~~~~D~~~~~~~   67 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPG-------------AKITFIECDLSDPESI   67 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTT-------------SEEEEEESETTSHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccc-------------cccccccccccccccc
Confidence            579999999999999999999995 578888898  555565555554322             6799999999999888


Q ss_pred             HHHh-------cCCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCCchhh
Q 016901          158 EPAL-------GNASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAI  224 (380)
Q Consensus       158 ~~a~-------~~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~~~~  224 (380)
                      ++++       ..+|+||||||.......      ++...+++|+.+...+.+++...+-++||++||+.....      
T Consensus        68 ~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~------  141 (167)
T PF00106_consen   68 RALIEEVIKRFGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGVRG------  141 (167)
T ss_dssp             HHHHHHHHHHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGTSS------
T ss_pred             cccccccccccccccccccccccccccccccccchhhhhccccccceeeeeeehheeccccceEEecchhhccC------
Confidence            7776       468999999997653222      223458899999999999988766679999999866432      


Q ss_pred             hchhhHHHHHHHHHHHHHH
Q 016901          225 LNLFWGVLLWKRKAEEALI  243 (380)
Q Consensus       225 ~~~~~~Y~~sK~~~E~~l~  243 (380)
                      ......|..+|.+.+.+++
T Consensus       142 ~~~~~~Y~askaal~~~~~  160 (167)
T PF00106_consen  142 SPGMSAYSASKAALRGLTQ  160 (167)
T ss_dssp             STTBHHHHHHHHHHHHHHH
T ss_pred             CCCChhHHHHHHHHHHHHH
Confidence            1334579999999998876

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.65  E-value=8.5e-15  Score=137.89  Aligned_cols=210  Identities=18%  Similarity=0.105  Sum_probs=144.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      ..+++++|||||++||.++++.|+.+|.+|+...|+.++.++..+.+.+-.           ...++.++++|++|..++
T Consensus        33 ~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~-----------~~~~i~~~~lDLssl~SV  101 (314)
T KOG1208|consen   33 LSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGK-----------ANQKIRVIQLDLSSLKSV  101 (314)
T ss_pred             CCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcC-----------CCCceEEEECCCCCHHHH
Confidence            366899999999999999999999999999999999988888877776511           126788999999999888


Q ss_pred             HHHh-------cCCCEEEEccccCcccc----CCCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCC---C
Q 016901          158 EPAL-------GNASVVICCIGASEKEV----FDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKF---G  219 (380)
Q Consensus       158 ~~a~-------~~~d~Vi~~Ag~~~~~~----~~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~---~  219 (380)
                      .+..       ...|++|||||......    ...+..+.+|+.|...+.+.+    +.....|||++||......   .
T Consensus       102 ~~fa~~~~~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~~  181 (314)
T KOG1208|consen  102 RKFAEEFKKKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDLK  181 (314)
T ss_pred             HHHHHHHHhcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCccchh
Confidence            7665       45899999999764322    234556899999987776654    4444479999999654110   0


Q ss_pred             C--chhh--hchhhHHHHHHHHHHHHHH----H--CCCCEEEEecCcccCCCcccccccceeeccCCcccCCC-CCHHHH
Q 016901          220 F--PAAI--LNLFWGVLLWKRKAEEALI----A--SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQ-VSNLQV  288 (380)
Q Consensus       220 ~--~~~~--~~~~~~Y~~sK~~~E~~l~----~--~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~-i~~~Dv  288 (380)
                      +  ++..  ......|+.||.+...+..    +  .|+.+..+.||.+.++.-.- .......-. ......+ -+.++-
T Consensus       182 ~l~~~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~l~r-~~~~~~~l~-~~l~~~~~ks~~~g  259 (314)
T KOG1208|consen  182 DLSGEKAKLYSSDAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTGLSR-VNLLLRLLA-KKLSWPLTKSPEQG  259 (314)
T ss_pred             hccchhccCccchhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccceec-chHHHHHHH-HHHHHHhccCHHHH
Confidence            0  1111  2333459999998764443    2  38999999999998763211 000000000 0001111 367788


Q ss_pred             HHHHHHHHhCCC
Q 016901          289 AELLACMAKNRS  300 (380)
Q Consensus       289 A~~i~~~l~~~~  300 (380)
                      |+.+..++.+++
T Consensus       260 a~t~~~~a~~p~  271 (314)
T KOG1208|consen  260 AATTCYAALSPE  271 (314)
T ss_pred             hhheehhccCcc
Confidence            888888888775

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=99.64  E-value=1.6e-15  Score=126.66  Aligned_cols=194  Identities=20%  Similarity=0.244  Sum_probs=142.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G--~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~  155 (380)
                      +.+|.++|.||||-.|+.+++++++.+  .+|+++.|++..-++                    ....+..+..|....+
T Consensus        16 mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~a--------------------t~k~v~q~~vDf~Kl~   75 (238)
T KOG4039|consen   16 MQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPA--------------------TDKVVAQVEVDFSKLS   75 (238)
T ss_pred             hhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCcc--------------------ccceeeeEEechHHHH
Confidence            477899999999999999999999998  489999998532111                    1267888889999889


Q ss_pred             cHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCCchhhhchhhHHHHHH
Q 016901          156 QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWK  235 (380)
Q Consensus       156 ~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~~Y~~sK  235 (380)
                      ++...+.+.|+.|+|.|....... ....++++-+-...+.+++++.|+++||.+||.|++.        .....|...|
T Consensus        76 ~~a~~~qg~dV~FcaLgTTRgkaG-adgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~GAd~--------sSrFlY~k~K  146 (238)
T KOG4039|consen   76 QLATNEQGPDVLFCALGTTRGKAG-ADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSAGADP--------SSRFLYMKMK  146 (238)
T ss_pred             HHHhhhcCCceEEEeecccccccc-cCceEeechHHHHHHHHHHHhCCCeEEEEEeccCCCc--------ccceeeeecc
Confidence            999999999999999986533322 4556788888889999999999999999999999854        2234599999


Q ss_pred             HHHHHHHHHCCC-CEEEEecCcccCCCcccccccc---eeeccCCcccC--CCCCHHHHHHHHHHHHhCCC
Q 016901          236 RKAEEALIASGL-PYTIVRPGGMERPTDAYKETHN---ITLSQEDTLFG--GQVSNLQVAELLACMAKNRS  300 (380)
Q Consensus       236 ~~~E~~l~~~g~-~~~ivRpg~v~gp~~~~~~~~~---~~~~~~~~~~~--~~i~~~DvA~~i~~~l~~~~  300 (380)
                      ...|.-+.+..+ +++|+|||.+.+.+........   +....-...+.  -..++.-++.+++..+..+.
T Consensus       147 GEvE~~v~eL~F~~~~i~RPG~ll~~R~esr~geflg~~~~a~l~~~~~R~~s~pv~~~~~amvn~~~~~~  217 (238)
T KOG4039|consen  147 GEVERDVIELDFKHIIILRPGPLLGERTESRQGEFLGNLTAALLRSRFQRLLSYPVYGDEVAMVNVLNTSG  217 (238)
T ss_pred             chhhhhhhhccccEEEEecCcceecccccccccchhhheehhhhhhHHHhccCCchhhhhHhHhhccccCC
Confidence            999988887655 5899999999987643321111   11111111110  12455567778888766655

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.63  E-value=4.6e-15  Score=129.18  Aligned_cols=213  Identities=18%  Similarity=0.186  Sum_probs=145.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ++|++++||+.|+||..+.++|+++|..+.++..+.+..+...+ ++           ...+...+.|+++|+++..+++
T Consensus         4 tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~ak-L~-----------ai~p~~~v~F~~~DVt~~~~~~   71 (261)
T KOG4169|consen    4 TGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAK-LQ-----------AINPSVSVIFIKCDVTNRGDLE   71 (261)
T ss_pred             cCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHH-Hh-----------ccCCCceEEEEEeccccHHHHH
Confidence            68999999999999999999999999988888777766544332 22           2234578999999999998888


Q ss_pred             HHh-------cCCCEEEEccccCccccCCCCCcchhhHHH----HHHHHHHHHH-cC--CCEEEEEccCCCCCCCCchhh
Q 016901          159 PAL-------GNASVVICCIGASEKEVFDITGPYRIDFQA----TKNLVDAATI-AK--VNHFIMVSSLGTNKFGFPAAI  224 (380)
Q Consensus       159 ~a~-------~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g----~~~ll~a~~~-~~--v~r~V~~SS~~~~~~~~~~~~  224 (380)
                      +++       +.+|++||+||...  ..+++..+.+|+.|    |...+..+.+ .|  -+-+|++||...-.+      
T Consensus        72 ~~f~ki~~~fg~iDIlINgAGi~~--dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P------  143 (261)
T KOG4169|consen   72 AAFDKILATFGTIDILINGAGILD--DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDP------  143 (261)
T ss_pred             HHHHHHHHHhCceEEEEccccccc--chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCc------
Confidence            876       46899999999764  34567778888776    4455566643 22  347999999654221      


Q ss_pred             hchhhHHHHHHHHH---------HHHHHHCCCCEEEEecCcccCCCcccccccceeeccCCcc-----cCCCCCHHHHHH
Q 016901          225 LNLFWGVLLWKRKA---------EEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTL-----FGGQVSNLQVAE  290 (380)
Q Consensus       225 ~~~~~~Y~~sK~~~---------E~~l~~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~-----~~~~i~~~DvA~  290 (380)
                      ......|++||+..         +.+.+++|+++..++||.+-..-..........+...+.+     .-..-+..+++.
T Consensus       144 ~p~~pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~~~l~~~~~q~~~~~a~  223 (261)
T KOG4169|consen  144 MPVFPVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDASGGYLEYSDSIKEALERAPKQSPACCAI  223 (261)
T ss_pred             cccchhhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhcCCcccccHHHHHHHHHcccCCHHHHHH
Confidence            12233599999764         3444568999999999987432110000001111111111     013467889999


Q ss_pred             HHHHHHhCCCCccCcEEEEecCC
Q 016901          291 LLACMAKNRSLSYCKVVEVIAET  313 (380)
Q Consensus       291 ~i~~~l~~~~~~~~~~~ni~~~~  313 (380)
                      .++++++.+..  |.+|-+..+.
T Consensus       224 ~~v~aiE~~~N--Gaiw~v~~g~  244 (261)
T KOG4169|consen  224 NIVNAIEYPKN--GAIWKVDSGS  244 (261)
T ss_pred             HHHHHHhhccC--CcEEEEecCc
Confidence            99999998553  7777776665

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.61  E-value=2.6e-14  Score=130.77  Aligned_cols=161  Identities=21%  Similarity=0.177  Sum_probs=123.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ..+.|+|||.-.+.|..++++|.++|+.|.+-.-+++..+.+..+.+               .++..-++.|++++++++
T Consensus        28 ~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~---------------s~rl~t~~LDVT~~esi~   92 (322)
T KOG1610|consen   28 SDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK---------------SPRLRTLQLDVTKPESVK   92 (322)
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc---------------CCcceeEeeccCCHHHHH
Confidence            56789999999999999999999999999999888777777654332               378888999999999999


Q ss_pred             HHh---------cCCCEEEEccccCccc-cC------CCCCcchhhHHHHHHHHHHHH---HcCCCEEEEEccCCCCCCC
Q 016901          159 PAL---------GNASVVICCIGASEKE-VF------DITGPYRIDFQATKNLVDAAT---IAKVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       159 ~a~---------~~~d~Vi~~Ag~~~~~-~~------~~~~~~~~nv~g~~~ll~a~~---~~~v~r~V~~SS~~~~~~~  219 (380)
                      ++.         .+.-.||||||..... ..      ++...+++|..|+..+..+..   +.-.+|+|++||.+..-. 
T Consensus        93 ~a~~~V~~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR~~-  171 (322)
T KOG1610|consen   93 EAAQWVKKHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGRVA-  171 (322)
T ss_pred             HHHHHHHHhcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccCcc-
Confidence            886         3578999999954221 11      334458899999888777653   222469999999876322 


Q ss_pred             CchhhhchhhHHHHHHHHHHHHH-------HHCCCCEEEEecCcccCC
Q 016901          220 FPAAILNLFWGVLLWKRKAEEAL-------IASGLPYTIVRPGGMERP  260 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l-------~~~g~~~~ivRpg~v~gp  260 (380)
                           .+...+|+.||.++|.+.       +..|+++.+|-||.+-.+
T Consensus       172 -----~p~~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~  214 (322)
T KOG1610|consen  172 -----LPALGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTN  214 (322)
T ss_pred             -----CcccccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCccccc
Confidence                 123457999999998553       358999999999965443

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=99.59  E-value=6.5e-15  Score=128.14  Aligned_cols=193  Identities=19%  Similarity=0.132  Sum_probs=146.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      ...++.|+.||.|+++++.....|+.|..+.|+..+.-                  ...|...+.+..+|.....-+...
T Consensus        53 e~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k~~------------------l~sw~~~vswh~gnsfssn~~k~~  114 (283)
T KOG4288|consen   53 EWTLVLGGNPFSGSEVLKNATNVVHSVGILSENENKQT------------------LSSWPTYVSWHRGNSFSSNPNKLK  114 (283)
T ss_pred             HHHhhhcCCCcchHHHHHHHHhhceeeeEeecccCcch------------------hhCCCcccchhhccccccCcchhh
Confidence            46899999999999999999999999999999876421                  123457899999999877777888


Q ss_pred             hcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCCchhhhchhhHHHHHHHHHHH
Q 016901          161 LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEE  240 (380)
Q Consensus       161 ~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~  240 (380)
                      +.++..++-++|....    ...+..+|-....+.++++++.|+++|+|+|....   +.+.   ....+|..+|+.+|.
T Consensus       115 l~g~t~v~e~~ggfgn----~~~m~~ing~ani~a~kaa~~~gv~~fvyISa~d~---~~~~---~i~rGY~~gKR~AE~  184 (283)
T KOG4288|consen  115 LSGPTFVYEMMGGFGN----IILMDRINGTANINAVKAAAKAGVPRFVYISAHDF---GLPP---LIPRGYIEGKREAEA  184 (283)
T ss_pred             hcCCcccHHHhcCccc----hHHHHHhccHhhHHHHHHHHHcCCceEEEEEhhhc---CCCC---ccchhhhccchHHHH
Confidence            8899999999986532    23345678888888999999999999999996422   2111   122479999999997


Q ss_pred             HHH-HCCCCEEEEecCcccCCCcccccccce-------------------eeccCCcccCCCCCHHHHHHHHHHHHhCCC
Q 016901          241 ALI-ASGLPYTIVRPGGMERPTDAYKETHNI-------------------TLSQEDTLFGGQVSNLQVAELLACMAKNRS  300 (380)
Q Consensus       241 ~l~-~~g~~~~ivRpg~v~gp~~~~~~~~~~-------------------~~~~~~~~~~~~i~~~DvA~~i~~~l~~~~  300 (380)
                      .+. .++.+-+++|||+|||.+........+                   .++.-+.....++++++||.+.+.++++|.
T Consensus       185 Ell~~~~~rgiilRPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve~VA~aal~ai~dp~  264 (283)
T KOG4288|consen  185 ELLKKFRFRGIILRPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVESVALAALKAIEDPD  264 (283)
T ss_pred             HHHHhcCCCceeeccceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCcccccccCCCcCHHHHHHHHHHhccCCC
Confidence            776 478999999999999975322111000                   122223334467999999999999999998


Q ss_pred             C
Q 016901          301 L  301 (380)
Q Consensus       301 ~  301 (380)
                      +
T Consensus       265 f  265 (283)
T KOG4288|consen  265 F  265 (283)
T ss_pred             c
Confidence            6

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.59  E-value=1.5e-13  Score=119.78  Aligned_cols=200  Identities=14%  Similarity=0.080  Sum_probs=133.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHC-CCeEEE-EeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKL-GFRVRA-GVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~-G~~V~~-l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .++.++||||+.+||..||++|++. |.++++ ..|+++++.+..+   .+..          ..+++++++.|+++.++
T Consensus         2 spksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~---~k~~----------~d~rvHii~Ldvt~deS   68 (249)
T KOG1611|consen    2 SPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELA---LKSK----------SDSRVHIIQLDVTCDES   68 (249)
T ss_pred             CCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHH---Hhhc----------cCCceEEEEEecccHHH
Confidence            3467999999999999999999986 666554 5566887522221   1110          13899999999999877


Q ss_pred             HHHHh---------cCCCEEEEccccCccccC-------CCCCcchhhHHHHHHHHHHH----HHcCC-----------C
Q 016901          157 IEPAL---------GNASVVICCIGASEKEVF-------DITGPYRIDFQATKNLVDAA----TIAKV-----------N  205 (380)
Q Consensus       157 ~~~a~---------~~~d~Vi~~Ag~~~~~~~-------~~~~~~~~nv~g~~~ll~a~----~~~~v-----------~  205 (380)
                      +.+++         +++|.+|+|||....-..       .+...+++|..|+..+.+++    ++...           .
T Consensus        69 ~~~~~~~V~~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~ra  148 (249)
T KOG1611|consen   69 IDNFVQEVEKIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRA  148 (249)
T ss_pred             HHHHHHHHHhhcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccce
Confidence            77665         468999999996522111       12334789988876666554    33222           2


Q ss_pred             EEEEEccCCCCCCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcc
Q 016901          206 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTL  278 (380)
Q Consensus       206 r~V~~SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~  278 (380)
                      .+|++||.+...   ......+..+|..||.+.-.+.+       +.++-++.++||||-...+.               
T Consensus       149 aIinisS~~~s~---~~~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg---------------  210 (249)
T KOG1611|consen  149 AIINISSSAGSI---GGFRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGG---------------  210 (249)
T ss_pred             eEEEeecccccc---CCCCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCC---------------
Confidence            789999965532   22233556789999999987766       36778999999999754221               


Q ss_pred             cCCCCCHHHHHHHHHHHHhCCC-CccCcEEEE
Q 016901          279 FGGQVSNLQVAELLACMAKNRS-LSYCKVVEV  309 (380)
Q Consensus       279 ~~~~i~~~DvA~~i~~~l~~~~-~~~~~~~ni  309 (380)
                      ....+.+++-+.-++..+.+-. ...|..||.
T Consensus       211 ~~a~ltveeSts~l~~~i~kL~~~hnG~ffn~  242 (249)
T KOG1611|consen  211 KKAALTVEESTSKLLASINKLKNEHNGGFFNR  242 (249)
T ss_pred             CCcccchhhhHHHHHHHHHhcCcccCcceEcc
Confidence            1234777777777776665422 144666664

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.57  E-value=1.5e-13  Score=125.52  Aligned_cols=203  Identities=16%  Similarity=0.139  Sum_probs=143.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      .+|+|||++.++|..++.++..+|++|.++.|+..+..++...++-..           ....|.+..+|+.|.+++..+
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~-----------~~~~v~~~S~d~~~Y~~v~~~  102 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLT-----------QVEDVSYKSVDVIDYDSVSKV  102 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhh-----------ccceeeEeccccccHHHHHHH
Confidence            589999999999999999999999999999999999888877664321           113477999999998877776


Q ss_pred             hc-------CCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHHHHc----C-CCEEEEEccCCCCCCCCch
Q 016901          161 LG-------NASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAATIA----K-VNHFIMVSSLGTNKFGFPA  222 (380)
Q Consensus       161 ~~-------~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~~~~----~-v~r~V~~SS~~~~~~~~~~  222 (380)
                      ++       .+|.+|||||.......      +.+..+++|+.|+.|++.++...    . .++|+.+||..+..     
T Consensus       103 ~~~l~~~~~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~-----  177 (331)
T KOG1210|consen  103 IEELRDLEGPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAML-----  177 (331)
T ss_pred             HhhhhhccCCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhc-----
Confidence            63       47999999996533222      23344889999999999876432    2 34899999864421     


Q ss_pred             hhhchhhHHHHHHHHHHHH-------HHHCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHHH
Q 016901          223 AILNLFWGVLLWKRKAEEA-------LIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACM  295 (380)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~-------l~~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~  295 (380)
                       ....++.|..+|.+...+       +..+|+.++..-|+.+..|+-............-.....+.+..+++|.+++.-
T Consensus       178 -~i~GysaYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En~tkP~~t~ii~g~ss~~~~e~~a~~~~~~  256 (331)
T KOG1210|consen  178 -GIYGYSAYSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFERENKTKPEETKIIEGGSSVIKCEEMAKAIVKG  256 (331)
T ss_pred             -CcccccccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCccccccccCchheeeecCCCCCcCHHHHHHHHHhH
Confidence             123445688888776533       234899999999999998853211111100111111123458899999999988


Q ss_pred             HhCCC
Q 016901          296 AKNRS  300 (380)
Q Consensus       296 l~~~~  300 (380)
                      +....
T Consensus       257 ~~rg~  261 (331)
T KOG1210|consen  257 MKRGN  261 (331)
T ss_pred             HhhcC
Confidence            87755

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.56  E-value=1.8e-13  Score=128.98  Aligned_cols=228  Identities=14%  Similarity=0.105  Sum_probs=131.0

Q ss_pred             CCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccc-cccCC-----------CCCCc
Q 016901           78 KDDNLAFVAGAT--GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGEL-ANKGI-----------QPVEM  143 (380)
Q Consensus        78 ~~~~~vlVtGat--G~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~-~~~~~-----------~~~~~  143 (380)
                      +++|+++||||+  .+||+++++.|+++|++|++.+|.+ .+....+........... ...+.           .....
T Consensus         6 ~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~   84 (299)
T PRK06300          6 LTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFDT   84 (299)
T ss_pred             CCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhhhhcCC
Confidence            478999999995  9999999999999999999976542 111111100000000000 00000           00011


Q ss_pred             eEEEEcCCCCh--------hcHHHHh-------cCCCEEEEccccCcc---c-----cCCCCCcchhhHHHHHHHHHHHH
Q 016901          144 LELVECDLEKR--------VQIEPAL-------GNASVVICCIGASEK---E-----VFDITGPYRIDFQATKNLVDAAT  200 (380)
Q Consensus       144 v~~~~~Dl~d~--------~~~~~a~-------~~~d~Vi~~Ag~~~~---~-----~~~~~~~~~~nv~g~~~ll~a~~  200 (380)
                      .+-+..|+++.        +++++++       +++|++|||||....   .     ..++...+++|+.|..++++++.
T Consensus        85 ~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~  164 (299)
T PRK06300         85 PEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFG  164 (299)
T ss_pred             CEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            22232333221        1233333       569999999985321   1     11334457899999999888775


Q ss_pred             Hc--CCCEEEEEccCCCCCCCCchhhhchh-hHHHHHHHHHHHHHH-------H-CCCCEEEEecCcccCCCcccccc-c
Q 016901          201 IA--KVNHFIMVSSLGTNKFGFPAAILNLF-WGVLLWKRKAEEALI-------A-SGLPYTIVRPGGMERPTDAYKET-H  268 (380)
Q Consensus       201 ~~--~v~r~V~~SS~~~~~~~~~~~~~~~~-~~Y~~sK~~~E~~l~-------~-~g~~~~ivRpg~v~gp~~~~~~~-~  268 (380)
                      ..  .-+++|++||...... .+     .. ..|+.+|.+.+.+.+       . +|++++.|.||.+..+....... .
T Consensus       165 p~m~~~G~ii~iss~~~~~~-~p-----~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~~~~~  238 (299)
T PRK06300        165 PIMNPGGSTISLTYLASMRA-VP-----GYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIGFIE  238 (299)
T ss_pred             HHhhcCCeEEEEeehhhcCc-CC-----CccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhcccccH
Confidence            32  1257999988654221 11     11 259999999987764       2 38999999999998763210000 0


Q ss_pred             c-eeeccCCcccCCCCCHHHHHHHHHHHHhCC-CCccCcEEEEecC
Q 016901          269 N-ITLSQEDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAE  312 (380)
Q Consensus       269 ~-~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~-~~~~~~~~ni~~~  312 (380)
                      . ..........+....++|+|.++..++... ....++++.+-++
T Consensus       239 ~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG  284 (299)
T PRK06300        239 RMVDYYQDWAPLPEPMEAEQVGAAAAFLVSPLASAITGETLYVDHG  284 (299)
T ss_pred             HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            0 000000111234578999999999998753 3356777776655

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.56  E-value=4.3e-14  Score=129.35  Aligned_cols=191  Identities=18%  Similarity=0.155  Sum_probs=129.1

Q ss_pred             HHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHHhc----CCCEEEEcc
Q 016901           96 TVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALG----NASVVICCI  171 (380)
Q Consensus        96 lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a~~----~~d~Vi~~A  171 (380)
                      ++++|+++|++|++++|+.++..                        ..+++++|++|.++++++++    ++|+|||||
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~------------------------~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nA   56 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT------------------------LDGFIQADLGDPASIDAAVAALPGRIDALFNIA   56 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh------------------------hhHhhcccCCCHHHHHHHHHHhcCCCeEEEECC
Confidence            47889999999999999876531                        12357899999998888775    589999999


Q ss_pred             ccCccccCCCCCcchhhHHHHHHHHHHHHHc--CCCEEEEEccCCCCCCCC--c------------h-------hhhchh
Q 016901          172 GASEKEVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGF--P------------A-------AILNLF  228 (380)
Q Consensus       172 g~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~--~v~r~V~~SS~~~~~~~~--~------------~-------~~~~~~  228 (380)
                      |...  ..++...+++|+.++..+++++...  ..++||++||........  +            .       .+....
T Consensus        57 G~~~--~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (241)
T PRK12428         57 GVPG--TAPVELVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALA  134 (241)
T ss_pred             CCCC--CCCHHHhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcc
Confidence            9653  2345566899999999999988653  236999999986642110  0            0       122344


Q ss_pred             hHHHHHHHHHHHHHH--------HCCCCEEEEecCcccCCCcccccc--cceeeccCCcccCCCCCHHHHHHHHHHHHhC
Q 016901          229 WGVLLWKRKAEEALI--------ASGLPYTIVRPGGMERPTDAYKET--HNITLSQEDTLFGGQVSNLQVAELLACMAKN  298 (380)
Q Consensus       229 ~~Y~~sK~~~E~~l~--------~~g~~~~ivRpg~v~gp~~~~~~~--~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~  298 (380)
                      ..|+.+|.+.+.+.+        ..|+++++|+||++.++.......  ............+....++|+|+++..++..
T Consensus       135 ~~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~l~s~  214 (241)
T PRK12428        135 TGYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSMLGQERVDSDAKRMGRPATADEQAAVLVFLCSD  214 (241)
T ss_pred             cHHHHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccchhhhhhHhhhhcccccCCCCCHHHHHHHHHHHcCh
Confidence            679999999886543        368999999999998874211000  0000000111123357899999999998865


Q ss_pred             CC-CccCcEEEEecC
Q 016901          299 RS-LSYCKVVEVIAE  312 (380)
Q Consensus       299 ~~-~~~~~~~ni~~~  312 (380)
                      .. ...|+.+.+-++
T Consensus       215 ~~~~~~G~~i~vdgg  229 (241)
T PRK12428        215 AARWINGVNLPVDGG  229 (241)
T ss_pred             hhcCccCcEEEecCc
Confidence            32 234666655544

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.55  E-value=1.3e-13  Score=126.64  Aligned_cols=165  Identities=21%  Similarity=0.248  Sum_probs=117.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchh--HHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCC-h
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR--AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK-R  154 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d-~  154 (380)
                      +.+++|+||||+++||..+++.|+++|++|+++.|+...  .+...+... .        .+.   ..+.+..+|+++ .
T Consensus         3 ~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-~--------~~~---~~~~~~~~Dvs~~~   70 (251)
T COG1028           3 LSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK-E--------AGG---GRAAAVAADVSDDE   70 (251)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH-h--------cCC---CcEEEEEecCCCCH
Confidence            467899999999999999999999999999988887654  233322222 0        000   257788899998 7


Q ss_pred             hcHHHHh-------cCCCEEEEccccCcc--cc-----CCCCCcchhhHHHHHHHHHHHHHcC-CCEEEEEccCCCCCCC
Q 016901          155 VQIEPAL-------GNASVVICCIGASEK--EV-----FDITGPYRIDFQATKNLVDAATIAK-VNHFIMVSSLGTNKFG  219 (380)
Q Consensus       155 ~~~~~a~-------~~~d~Vi~~Ag~~~~--~~-----~~~~~~~~~nv~g~~~ll~a~~~~~-v~r~V~~SS~~~~~~~  219 (380)
                      ++++.++       +++|++|||||....  ..     ..+...+++|+.|...+.+++...- .++||++||.... ..
T Consensus        71 ~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~-~~  149 (251)
T COG1028          71 ESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGL-GG  149 (251)
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhc-CC
Confidence            7666554       459999999997542  11     1234447899999888887443211 1189999998764 32


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCC
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERP  260 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp  260 (380)
                      ...     ...|+.||++.+.+.+       ..|++++.|.||.+..+
T Consensus       150 ~~~-----~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~  192 (251)
T COG1028         150 PPG-----QAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTP  192 (251)
T ss_pred             CCC-----cchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCc
Confidence            111     3579999999886654       37899999999977655

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.54  E-value=1.8e-14  Score=120.23  Aligned_cols=213  Identities=13%  Similarity=0.073  Sum_probs=148.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      ..++.|+|||+.-+||+.++..|++.|.+|+++.|++..+..+.++                ...-++.+.+|+.+-+.+
T Consensus         5 laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e----------------~p~~I~Pi~~Dls~wea~   68 (245)
T KOG1207|consen    5 LAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKE----------------TPSLIIPIVGDLSAWEAL   68 (245)
T ss_pred             ccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhh----------------CCcceeeeEecccHHHHH
Confidence            4678999999999999999999999999999999999887776541                123488899999998888


Q ss_pred             HHHhc---CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHHH----cC-CCEEEEEccCCCCCCCCchh
Q 016901          158 EPALG---NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATI----AK-VNHFIMVSSLGTNKFGFPAA  223 (380)
Q Consensus       158 ~~a~~---~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~~----~~-v~r~V~~SS~~~~~~~~~~~  223 (380)
                      .+++.   .+|.++||||.....+      .++...|++|+.+..++.+...+    .+ .+.+|.+||.......    
T Consensus        69 ~~~l~~v~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~----  144 (245)
T KOG1207|consen   69 FKLLVPVFPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPL----  144 (245)
T ss_pred             HHhhcccCchhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhccccc----
Confidence            88875   4799999999653222      24556689999998887776432    23 3479999997654321    


Q ss_pred             hhchhhHHHHHHHHHHHHHH----H---CCCCEEEEecCcccCCCc--ccccccceeeccCCcccCCCCCHHHHHHHHHH
Q 016901          224 ILNLFWGVLLWKRKAEEALI----A---SGLPYTIVRPGGMERPTD--AYKETHNITLSQEDTLFGGQVSNLQVAELLAC  294 (380)
Q Consensus       224 ~~~~~~~Y~~sK~~~E~~l~----~---~g~~~~ivRpg~v~gp~~--~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~  294 (380)
                        ..-+.|..+|.+.+.+.+    +   ..+++..+.|..++...+  +|.......---.....+.|-.++.+.+++..
T Consensus       145 --~nHtvYcatKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~riPl~rFaEV~eVVnA~lf  222 (245)
T KOG1207|consen  145 --DNHTVYCATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDRIPLKRFAEVDEVVNAVLF  222 (245)
T ss_pred             --CCceEEeecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchhccchhhhCchhhhhHHHHHHhhhee
Confidence              223459999999886654    2   568999999999875432  22221111111111123356778899999998


Q ss_pred             HHhCCC-CccCcEEEEecC
Q 016901          295 MAKNRS-LSYCKVVEVIAE  312 (380)
Q Consensus       295 ~l~~~~-~~~~~~~ni~~~  312 (380)
                      ++.+.. ...|.++-+-+|
T Consensus       223 LLSd~ssmttGstlpveGG  241 (245)
T KOG1207|consen  223 LLSDNSSMTTGSTLPVEGG  241 (245)
T ss_pred             eeecCcCcccCceeeecCC
Confidence            887644 234555544443

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.52  E-value=3.1e-13  Score=116.04  Aligned_cols=160  Identities=16%  Similarity=0.095  Sum_probs=118.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      ..+.+||||||+.+||..+++++.+.|-+|++..|++.++.+.....                 +.+.-+.+|+.|.+++
T Consensus         3 ~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~-----------------p~~~t~v~Dv~d~~~~   65 (245)
T COG3967           3 TTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAEN-----------------PEIHTEVCDVADRDSR   65 (245)
T ss_pred             ccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcC-----------------cchheeeecccchhhH
Confidence            35679999999999999999999999999999999999887765421                 6777889999998877


Q ss_pred             HHHh-------cCCCEEEEccccCccccC--------CCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCC
Q 016901          158 EPAL-------GNASVVICCIGASEKEVF--------DITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKF  218 (380)
Q Consensus       158 ~~a~-------~~~d~Vi~~Ag~~~~~~~--------~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~  218 (380)
                      ++.+       ...+++|||||.......        +.+..+.+|+.++.+|..+..    +..-.-+|.+||.-+.-+
T Consensus        66 ~~lvewLkk~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvP  145 (245)
T COG3967          66 RELVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVP  145 (245)
T ss_pred             HHHHHHHHhhCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCc
Confidence            7665       258999999997532111        123336789999888777654    444447999999543211


Q ss_pred             CCchhhhchhhHHHHHHHHHHHHH-------HHCCCCEEEEecCcccCC
Q 016901          219 GFPAAILNLFWGVLLWKRKAEEAL-------IASGLPYTIVRPGGMERP  260 (380)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l-------~~~g~~~~ivRpg~v~gp  260 (380)
                            .....-|.++|++...+-       +..++++.=+-|..|..+
T Consensus       146 ------m~~~PvYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         146 ------MASTPVYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             ------ccccccchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence                  111224999999887552       346888988889888764

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.48  E-value=1.6e-13  Score=118.20  Aligned_cols=158  Identities=15%  Similarity=0.129  Sum_probs=118.6

Q ss_pred             CCCeEEEEcC-CChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           79 DDNLAFVAGA-TGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        79 ~~~~vlVtGa-tG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      ..+.|||||+ .|+||-+|++++.++|+.|++..|+.+....+...                  .++.....|+++++++
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~------------------~gl~~~kLDV~~~~~V   67 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQ------------------FGLKPYKLDVSKPEEV   67 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHh------------------hCCeeEEeccCChHHH
Confidence            4568888875 68999999999999999999999998877666421                  4678889999999888


Q ss_pred             HHHh--------cCCCEEEEccccCcc-c-----cCCCCCcchhhHHHHHHHHHHHHHc---CCCEEEEEccCCCCCCCC
Q 016901          158 EPAL--------GNASVVICCIGASEK-E-----VFDITGPYRIDFQATKNLVDAATIA---KVNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       158 ~~a~--------~~~d~Vi~~Ag~~~~-~-----~~~~~~~~~~nv~g~~~ll~a~~~~---~v~r~V~~SS~~~~~~~~  220 (380)
                      .+..        +..|.+|||||..=. .     ....+..+++|+.|..++.++....   ..+.||++.|..+.-.. 
T Consensus        68 ~~v~~evr~~~~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpf-  146 (289)
T KOG1209|consen   68 VTVSGEVRANPDGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPF-  146 (289)
T ss_pred             HHHHHHHhhCCCCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEecc-
Confidence            7665        357999999996421 1     1123445889999987777765421   23579999997653321 


Q ss_pred             chhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCC
Q 016901          221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERP  260 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp  260 (380)
                           ...+.|.+||++...+.+       -.|++++.+-+|.|...
T Consensus       147 -----pf~~iYsAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~T~  188 (289)
T KOG1209|consen  147 -----PFGSIYSASKAAIHAYARTLRLELKPFGVRVINAITGGVATD  188 (289)
T ss_pred             -----chhhhhhHHHHHHHHhhhhcEEeeeccccEEEEecccceecc
Confidence                 233569999999988865       27899999999998654

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.46  E-value=2e-12  Score=113.12  Aligned_cols=157  Identities=20%  Similarity=0.194  Sum_probs=107.9

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCCch---hHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           82 LAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQ---RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        82 ~vlVtGatG~iG~~lv~~Ll~~G-~~V~~l~R~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      ++|||||+|.||..+++.|+++| .+|+++.|+..   ......+.++..+             .++.++.+|++|++++
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g-------------~~v~~~~~Dv~d~~~v   68 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAG-------------ARVEYVQCDVTDPEAV   68 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT--------------EEEEEE--TTSHHHH
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCC-------------CceeeeccCccCHHHH
Confidence            68999999999999999999998 58999999932   2233444444322             6899999999999999


Q ss_pred             HHHhc-------CCCEEEEccccCccccCCC------CCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCCchhh
Q 016901          158 EPALG-------NASVVICCIGASEKEVFDI------TGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAI  224 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~~~~~~~------~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~~~~  224 (380)
                      .+++.       .++.|||+||.........      ...+...+.|+.+|.++......+.||++||+......     
T Consensus        69 ~~~~~~~~~~~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~G~-----  143 (181)
T PF08659_consen   69 AAALAQLRQRFGPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSLLGG-----  143 (181)
T ss_dssp             HHHHHTSHTTSS-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHTT------
T ss_pred             HHHHHHHHhccCCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHhccC-----
Confidence            98873       4689999999754332222      12255678899999999988889999999997542211     


Q ss_pred             hchhhHHHHHHHHHHHHHH---HCCCCEEEEecCcc
Q 016901          225 LNLFWGVLLWKRKAEEALI---ASGLPYTIVRPGGM  257 (380)
Q Consensus       225 ~~~~~~Y~~sK~~~E~~l~---~~g~~~~ivRpg~v  257 (380)
                       .....|.......+.+.+   ..|.+++.|.-|..
T Consensus       144 -~gq~~YaaAN~~lda~a~~~~~~g~~~~sI~wg~W  178 (181)
T PF08659_consen  144 -PGQSAYAAANAFLDALARQRRSRGLPAVSINWGAW  178 (181)
T ss_dssp             -TTBHHHHHHHHHHHHHHHHHHHTTSEEEEEEE-EB
T ss_pred             -cchHhHHHHHHHHHHHHHHHHhCCCCEEEEEcccc
Confidence             123468888888887764   47889888887654

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.44  E-value=3.7e-12  Score=146.63  Aligned_cols=175  Identities=14%  Similarity=0.084  Sum_probs=120.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCCchh-----------HHHHHHHH----Hhhh--------------
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSVQR-----------AENLVQSV----KQMK--------------  128 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~-G~~V~~l~R~~~~-----------~~~~~~~~----~~~~--------------  128 (380)
                      .++++|||||+++||..++++|+++ |++|+++.|+...           ..++...+    ...+              
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            5789999999999999999999998 6999999998210           00000000    0000              


Q ss_pred             ------hcccccccCCCCCCceEEEEcCCCChhcHHHHhc------CCCEEEEccccCccc------cCCCCCcchhhHH
Q 016901          129 ------LDGELANKGIQPVEMLELVECDLEKRVQIEPALG------NASVVICCIGASEKE------VFDITGPYRIDFQ  190 (380)
Q Consensus       129 ------~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a~~------~~d~Vi~~Ag~~~~~------~~~~~~~~~~nv~  190 (380)
                            +..... .-.+...++.++.+|++|.+++.+++.      ++|.||||||.....      ..++...+++|+.
T Consensus      2076 ~~~~~ei~~~la-~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~ 2154 (2582)
T TIGR02813      2076 VLSSLEIAQALA-AFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVD 2154 (2582)
T ss_pred             cchhHHHHHHHH-HHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHH
Confidence                  000000 000011568899999999988887763      589999999964322      1233445899999


Q ss_pred             HHHHHHHHHHHcCCCEEEEEccCCCCCCCCchhhhchhhHHHHHHHHHHHHHHH-----CCCCEEEEecCcccCC
Q 016901          191 ATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-----SGLPYTIVRPGGMERP  260 (380)
Q Consensus       191 g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-----~g~~~~ivRpg~v~gp  260 (380)
                      |+.++++++.....++||++||.......      .....|+.+|...+.+.+.     .+++++.|.||.+.|+
T Consensus      2155 G~~~Ll~al~~~~~~~IV~~SSvag~~G~------~gqs~YaaAkaaL~~la~~la~~~~~irV~sI~wG~wdtg 2223 (2582)
T TIGR02813      2155 GLLSLLAALNAENIKLLALFSSAAGFYGN------TGQSDYAMSNDILNKAALQLKALNPSAKVMSFNWGPWDGG 2223 (2582)
T ss_pred             HHHHHHHHHHHhCCCeEEEEechhhcCCC------CCcHHHHHHHHHHHHHHHHHHHHcCCcEEEEEECCeecCC
Confidence            99999999987777899999997653221      2234699999988766542     3689999999988664

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.40  E-value=7e-13  Score=110.59  Aligned_cols=212  Identities=15%  Similarity=0.159  Sum_probs=147.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      .++-..+||||.+++|+..+++|++.|..|.+++-..++-.+..+++.                .++.|.+.|++...++
T Consensus         7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg----------------~~~vf~padvtsekdv   70 (260)
T KOG1199|consen    7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELG----------------GKVVFTPADVTSEKDV   70 (260)
T ss_pred             hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhC----------------CceEEeccccCcHHHH
Confidence            356789999999999999999999999999999987777666655432                6899999999998888


Q ss_pred             HHHh-------cCCCEEEEccccC------------ccccCCCCCcchhhHHHHHHHHHHHHH--------cCCC--EEE
Q 016901          158 EPAL-------GNASVVICCIGAS------------EKEVFDITGPYRIDFQATKNLVDAATI--------AKVN--HFI  208 (380)
Q Consensus       158 ~~a~-------~~~d~Vi~~Ag~~------------~~~~~~~~~~~~~nv~g~~~ll~a~~~--------~~v~--r~V  208 (380)
                      ..++       +..|+.+||||..            .++..+++..+++|+.||.|+++....        ++-+  -+|
T Consensus        71 ~aala~ak~kfgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgvii  150 (260)
T KOG1199|consen   71 RAALAKAKAKFGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVII  150 (260)
T ss_pred             HHHHHHHHhhccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEE
Confidence            8776       4589999999953            122335566688999999999986531        1112  355


Q ss_pred             EEccCCCCCCCCchhhhchhhHHHHHHHHHHHH-------HHHCCCCEEEEecCcccCCCccccccc-ceeeccCCcccC
Q 016901          209 MVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEA-------LIASGLPYTIVRPGGMERPTDAYKETH-NITLSQEDTLFG  280 (380)
Q Consensus       209 ~~SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~-------l~~~g~~~~ivRpg~v~gp~~~~~~~~-~~~~~~~~~~~~  280 (380)
                      ...|..+.+..      -....|.+||...-.+       +...|++++.|-||.+-.|--...... ...+........
T Consensus       151 ntasvaafdgq------~gqaaysaskgaivgmtlpiardla~~gir~~tiapglf~tpllsslpekv~~fla~~ipfps  224 (260)
T KOG1199|consen  151 NTASVAAFDGQ------TGQAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSSLPEKVKSFLAQLIPFPS  224 (260)
T ss_pred             eeceeeeecCc------cchhhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhhhhHHHHHHHHHhCCCch
Confidence            55554443221      2234699999875433       223799999999999988743211111 111112222223


Q ss_pred             CCCCHHHHHHHHHHHHhCCCCccCcEEEEecC
Q 016901          281 GQVSNLQVAELLACMAKNRSLSYCKVVEVIAE  312 (380)
Q Consensus       281 ~~i~~~DvA~~i~~~l~~~~~~~~~~~ni~~~  312 (380)
                      ..-|+.+.+..+..+++|+- ..++++.+-+.
T Consensus       225 rlg~p~eyahlvqaiienp~-lngevir~dga  255 (260)
T KOG1199|consen  225 RLGHPHEYAHLVQAIIENPY-LNGEVIRFDGA  255 (260)
T ss_pred             hcCChHHHHHHHHHHHhCcc-cCCeEEEecce
Confidence            34688889999999999987 56777766543

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.39  E-value=7.1e-12  Score=114.79  Aligned_cols=164  Identities=17%  Similarity=0.150  Sum_probs=122.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc---
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ---  156 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~---  156 (380)
                      ++-+.|||||.+||++.+++|+++|.+|+++.|+.++++.+.+++.+.-            .-.+.++..|+++.+.   
T Consensus        49 g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~------------~vev~~i~~Dft~~~~~ye  116 (312)
T KOG1014|consen   49 GSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKY------------KVEVRIIAIDFTKGDEVYE  116 (312)
T ss_pred             CCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHh------------CcEEEEEEEecCCCchhHH
Confidence            3679999999999999999999999999999999999999999886531            1458889999998664   


Q ss_pred             -HHHHhcC--CCEEEEccccCccccC--------CCCCcchhhHHHHHHHHHH----HHHcCCCEEEEEccCCCCCCCCc
Q 016901          157 -IEPALGN--ASVVICCIGASEKEVF--------DITGPYRIDFQATKNLVDA----ATIAKVNHFIMVSSLGTNKFGFP  221 (380)
Q Consensus       157 -~~~a~~~--~d~Vi~~Ag~~~~~~~--------~~~~~~~~nv~g~~~ll~a----~~~~~v~r~V~~SS~~~~~~~~~  221 (380)
                       +.+.+.+  +-++|||+|.....+.        ..+..+.+|+.++..+.+.    +.+.+.+-+|++||.+.-.    
T Consensus       117 ~i~~~l~~~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~----  192 (312)
T KOG1014|consen  117 KLLEKLAGLDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLI----  192 (312)
T ss_pred             HHHHHhcCCceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccc----
Confidence             4444444  6799999997642221        1233467888886655554    4455667899999976522    


Q ss_pred             hhhhchhhHHHHHHHHHHHHH-------HHCCCCEEEEecCcccCCC
Q 016901          222 AAILNLFWGVLLWKRKAEEAL-------IASGLPYTIVRPGGMERPT  261 (380)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l-------~~~g~~~~ivRpg~v~gp~  261 (380)
                        +.+..+.|+.+|...+.+-       +..|+.+-.+-|..|.++.
T Consensus       193 --p~p~~s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm  237 (312)
T KOG1014|consen  193 --PTPLLSVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKM  237 (312)
T ss_pred             --cChhHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheeccc
Confidence              2244567999999776442       3479999999999987763

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=99.37  E-value=4.2e-12  Score=111.83  Aligned_cols=235  Identities=14%  Similarity=0.040  Sum_probs=154.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHH--HHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAE--NLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ..+..||||-||.=|++|++.|+.+|++|..+.|..+...  +......+         -............||++|...
T Consensus        27 ~rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~n---------P~~h~~~~mkLHYgDmTDss~   97 (376)
T KOG1372|consen   27 PRKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSN---------PHTHNGASMKLHYGDMTDSSC   97 (376)
T ss_pred             cceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcC---------chhcccceeEEeeccccchHH
Confidence            4568999999999999999999999999999998765321  11111100         001112456778899999999


Q ss_pred             HHHHhcC--CCEEEEccccCccc--cCCCCCcchhhHHHHHHHHHHHHHcCCC---EEEEEccCCCCC-----CCCchhh
Q 016901          157 IEPALGN--ASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVN---HFIMVSSLGTNK-----FGFPAAI  224 (380)
Q Consensus       157 ~~~a~~~--~d~Vi~~Ag~~~~~--~~~~~~~~~~nv~g~~~ll~a~~~~~v~---r~V~~SS~~~~~-----~~~~~~~  224 (380)
                      +.+++..  .+-|+|+|+...-.  ..-++-..+++..|+.++++|.+..+..   ||.-.||.-.+.     +..+..+
T Consensus        98 L~k~I~~ikPtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQsE~TP  177 (376)
T KOG1372|consen   98 LIKLISTIKPTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQSETTP  177 (376)
T ss_pred             HHHHHhccCchhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCcccCCC
Confidence            9999864  68999999854221  1122333577888999999999887632   787888853321     1122345


Q ss_pred             hchhhHHHHHHHHHHHHH----HHCCCCEEEEecCccc---CCCc--ccc--------------cccceeeccCCcccCC
Q 016901          225 LNLFWGVLLWKRKAEEAL----IASGLPYTIVRPGGME---RPTD--AYK--------------ETHNITLSQEDTLFGG  281 (380)
Q Consensus       225 ~~~~~~Y~~sK~~~E~~l----~~~g~~~~ivRpg~v~---gp~~--~~~--------------~~~~~~~~~~~~~~~~  281 (380)
                      .-|.++|+.+|..+-.++    ..+++-.|   -|.++   .|+.  ++-              ....+.++ ......+
T Consensus       178 FyPRSPYa~aKmy~~WivvNyREAYnmfAc---NGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LG-NL~a~RD  253 (376)
T KOG1372|consen  178 FYPRSPYAAAKMYGYWIVVNYREAYNMFAC---NGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELG-NLSALRD  253 (376)
T ss_pred             CCCCChhHHhhhhheEEEEEhHHhhcceee---ccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEec-chhhhcc
Confidence            667889999998875432    23554332   23333   3321  110              00011111 1223347


Q ss_pred             CCCHHHHHHHHHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCC
Q 016901          282 QVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPS  329 (380)
Q Consensus       282 ~i~~~DvA~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~  329 (380)
                      |-|..|..++|+.++.++.   ..-|-|..++..|.+|+.++.....|
T Consensus       254 WGhA~dYVEAMW~mLQ~d~---PdDfViATge~hsVrEF~~~aF~~ig  298 (376)
T KOG1372|consen  254 WGHAGDYVEAMWLMLQQDS---PDDFVIATGEQHSVREFCNLAFAEIG  298 (376)
T ss_pred             cchhHHHHHHHHHHHhcCC---CCceEEecCCcccHHHHHHHHHHhhC
Confidence            8999999999999999877   44567899999999999888665544

>PRK06720 hypothetical protein; Provisional

Probab=99.29  E-value=8.6e-11  Score=101.44  Aligned_cols=125  Identities=14%  Similarity=0.149  Sum_probs=85.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++++++||||+|+||..+++.|+++|++|+++.|+.+......+.+...+             ....++.+|++|.+++
T Consensus        14 l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~-------------~~~~~~~~Dl~~~~~v   80 (169)
T PRK06720         14 LAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLG-------------GEALFVSYDMEKQGDW   80 (169)
T ss_pred             cCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-------------CcEEEEEccCCCHHHH
Confidence            357899999999999999999999999999999998776655444333211             4567889999998877


Q ss_pred             HHHh-------cCCCEEEEccccCccccCCCC----CcchhhHHHHH----HHHHHHHHc-------CCCEEEEEccCCC
Q 016901          158 EPAL-------GNASVVICCIGASEKEVFDIT----GPYRIDFQATK----NLVDAATIA-------KVNHFIMVSSLGT  215 (380)
Q Consensus       158 ~~a~-------~~~d~Vi~~Ag~~~~~~~~~~----~~~~~nv~g~~----~ll~a~~~~-------~v~r~V~~SS~~~  215 (380)
                      .+++       +++|.+|||||..........    ....+|+.++.    .+...+.+.       +.+||..+|+.++
T Consensus        81 ~~~v~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (169)
T PRK06720         81 QRVISITLNAFSRIDMLFQNAGLYKIDSIFSRQQENDSNVLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQ  160 (169)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCCCCCcccccchhHhhceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEeccccc
Confidence            7654       569999999996432111101    11233444433    333332222       3568999998776

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=99.27  E-value=4.5e-11  Score=104.68  Aligned_cols=228  Identities=11%  Similarity=0.065  Sum_probs=150.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHC-CC-eEEEEeC-CchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKL-GF-RVRAGVR-SVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~-G~-~V~~l~R-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~  155 (380)
                      ...+|||||+-|.+|..+++.|... |. .|++.+- .++.  .+.                    ..--++..|+.|..
T Consensus        43 ~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~--~V~--------------------~~GPyIy~DILD~K  100 (366)
T KOG2774|consen   43 KAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPA--NVT--------------------DVGPYIYLDILDQK  100 (366)
T ss_pred             CCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCch--hhc--------------------ccCCchhhhhhccc
Confidence            4468999999999999999888766 64 4555332 2221  111                    23346778999999


Q ss_pred             cHHHHh--cCCCEEEEccccC-ccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCCch------hhhc
Q 016901          156 QIEPAL--GNASVVICCIGAS-EKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPA------AILN  226 (380)
Q Consensus       156 ~~~~a~--~~~d~Vi~~Ag~~-~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~~------~~~~  226 (380)
                      .+++.+  ..+|.+||..+.- .....+..-..++|+.|..|+++.+++++.+ +..-|++|+.....|-      ....
T Consensus       101 ~L~eIVVn~RIdWL~HfSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~kL~-iFVPSTIGAFGPtSPRNPTPdltIQR  179 (366)
T KOG2774|consen  101 SLEEIVVNKRIDWLVHFSALLSAVGETNVPLALQVNIRGVHNILQVAAKHKLK-VFVPSTIGAFGPTSPRNPTPDLTIQR  179 (366)
T ss_pred             cHHHhhcccccceeeeHHHHHHHhcccCCceeeeecchhhhHHHHHHHHcCee-EeecccccccCCCCCCCCCCCeeeec
Confidence            999988  4599999986522 1222233445789999999999999999874 5557888875433222      2344


Q ss_pred             hhhHHHHHHHHHHHHHH----HCCCCEEEEecCcccC---CCcccc-----------cccceeeccCCcccCCCCCHHHH
Q 016901          227 LFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMER---PTDAYK-----------ETHNITLSQEDTLFGGQVSNLQV  288 (380)
Q Consensus       227 ~~~~Y~~sK~~~E~~l~----~~g~~~~ivRpg~v~g---p~~~~~-----------~~~~~~~~~~~~~~~~~i~~~Dv  288 (380)
                      +..-||.||..+|-+-+    ..|+++..+|...+..   |++...           ..+...-.......-..++.+|+
T Consensus       180 PRTIYGVSKVHAEL~GEy~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtrlpmmy~~dc  259 (366)
T KOG2774|consen  180 PRTIYGVSKVHAELLGEYFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTRLPMMYDTDC  259 (366)
T ss_pred             CceeechhHHHHHHHHHHHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCccCceeehHHH
Confidence            56679999999885433    4789999999876653   222100           00111111111111135788999


Q ss_pred             HHHHHHHHhCCCC-ccCcEEEEecCCCCCcchHHHHHHhcCCC
Q 016901          289 AELLACMAKNRSL-SYCKVVEVIAETTAPLTPMEELLAKIPSQ  330 (380)
Q Consensus       289 A~~i~~~l~~~~~-~~~~~~ni~~~~~~s~~~~~e~~~~~~~~  330 (380)
                      -++++.++..+.. ....+||+.+ -..+..|+++.+.+....
T Consensus       260 ~~~~~~~~~a~~~~lkrr~ynvt~-~sftpee~~~~~~~~~p~  301 (366)
T KOG2774|consen  260 MASVIQLLAADSQSLKRRTYNVTG-FSFTPEEIADAIRRVMPG  301 (366)
T ss_pred             HHHHHHHHhCCHHHhhhheeeece-eccCHHHHHHHHHhhCCC
Confidence            9999888876542 3567899765 445678999999887643

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.24  E-value=8e-11  Score=102.30  Aligned_cols=155  Identities=15%  Similarity=0.124  Sum_probs=111.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      |+++|||||||+|. +++.|+++|++|++++|++++...+...+..              ..++.++.+|++|.+++.++
T Consensus         1 m~vlVtGGtG~gg~-la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~--------------~~~i~~~~~Dv~d~~sv~~~   65 (177)
T PRK08309          1 MHALVIGGTGMLKR-VSLWLCEKGFHVSVIARREVKLENVKRESTT--------------PESITPLPLDYHDDDALKLA   65 (177)
T ss_pred             CEEEEECcCHHHHH-HHHHHHHCcCEEEEEECCHHHHHHHHHHhhc--------------CCcEEEEEccCCCHHHHHHH
Confidence            57999999998876 9999999999999999998766555432211              14688899999999888877


Q ss_pred             hc-------CCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCC----EEEEEccCCCCCCCCchhhhchhh
Q 016901          161 LG-------NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN----HFIMVSSLGTNKFGFPAAILNLFW  229 (380)
Q Consensus       161 ~~-------~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~----r~V~~SS~~~~~~~~~~~~~~~~~  229 (380)
                      ++       .+|.+|+.+                .+.++.++..+|++.|++    +|+|+=...+.+.           
T Consensus        66 i~~~l~~~g~id~lv~~v----------------h~~~~~~~~~~~~~~gv~~~~~~~~h~~gs~~~~~-----------  118 (177)
T PRK08309         66 IKSTIEKNGPFDLAVAWI----------------HSSAKDALSVVCRELDGSSETYRLFHVLGSAASDP-----------  118 (177)
T ss_pred             HHHHHHHcCCCeEEEEec----------------cccchhhHHHHHHHHccCCCCceEEEEeCCcCCch-----------
Confidence            73       467777654                445789999999999998    8988875544210           


Q ss_pred             HHHHHHHHHHHHHHHCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHHHHhCCC
Q 016901          230 GVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRS  300 (380)
Q Consensus       230 ~Y~~sK~~~E~~l~~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~~  300 (380)
                           +...+.... ....+.=|..|++....                 ...|++=+.+++.++.+++++.
T Consensus       119 -----~~~~~~~~~-~~~~~~~i~lgf~~~~~-----------------~~rwlt~~ei~~gv~~~~~~~~  166 (177)
T PRK08309        119 -----RIPSEKIGP-ARCSYRRVILGFVLEDT-----------------YSRWLTHEEISDGVIKAIESDA  166 (177)
T ss_pred             -----hhhhhhhhh-cCCceEEEEEeEEEeCC-----------------ccccCchHHHHHHHHHHHhcCC
Confidence                 111222222 44566666667764321                 1257888899999999998765

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.10  E-value=5.9e-11  Score=103.74  Aligned_cols=200  Identities=14%  Similarity=0.120  Sum_probs=125.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEE--------EcC
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELV--------ECD  150 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--------~~D  150 (380)
                      +.+.+||||++-+||..++..+.+.+.++....++....+                      ..++.+.        .+|
T Consensus         5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~----------------------~~~L~v~~gd~~v~~~g~   62 (253)
T KOG1204|consen    5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE----------------------LEGLKVAYGDDFVHVVGD   62 (253)
T ss_pred             cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc----------------------ccceEEEecCCcceechH
Confidence            5678999999999999999999988865443333322111                      1233333        344


Q ss_pred             CCChhcHHHHh-------cCCCEEEEccccCcc---------ccCCCCCcchhhHHHHHHHHHHHHH----cC-CCEEEE
Q 016901          151 LEKRVQIEPAL-------GNASVVICCIGASEK---------EVFDITGPYRIDFQATKNLVDAATI----AK-VNHFIM  209 (380)
Q Consensus       151 l~d~~~~~~a~-------~~~d~Vi~~Ag~~~~---------~~~~~~~~~~~nv~g~~~ll~a~~~----~~-v~r~V~  209 (380)
                      +++...+.+.+       ..-|.||||||..+.         +...+..+++.|+.+...+...+..    .. .+-+|+
T Consensus        63 ~~e~~~l~al~e~~r~k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVn  142 (253)
T KOG1204|consen   63 ITEEQLLGALREAPRKKGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVN  142 (253)
T ss_pred             HHHHHHHHHHHhhhhhcCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEE
Confidence            44433333332       347999999996422         1223455688999998877765532    22 357899


Q ss_pred             EccCCCCCCCCchhhhchhhHHHHHHHHHHHHHH-----HC-CCCEEEEecCcccCCCcccccccc-e-----eeccCCc
Q 016901          210 VSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-----AS-GLPYTIVRPGGMERPTDAYKETHN-I-----TLSQEDT  277 (380)
Q Consensus       210 ~SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-----~~-g~~~~ivRpg~v~gp~~~~~~~~~-~-----~~~~~~~  277 (380)
                      +||.....+      ...+..|+.+|++.+.+.+     ++ ++++..++||.|-.+.+....... +     .......
T Consensus       143 vSS~aav~p------~~~wa~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~  216 (253)
T KOG1204|consen  143 VSSLAAVRP------FSSWAAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELK  216 (253)
T ss_pred             ecchhhhcc------ccHHHHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHH
Confidence            999765432      3556679999999998876     34 899999999999877543222111 0     0001111


Q ss_pred             ccCCCCCHHHHHHHHHHHHhCCCCccCcE
Q 016901          278 LFGGQVSNLQVAELLACMAKNRSLSYCKV  306 (380)
Q Consensus       278 ~~~~~i~~~DvA~~i~~~l~~~~~~~~~~  306 (380)
                      ..+..++..+.|..+..++++.....|+.
T Consensus       217 ~~~~ll~~~~~a~~l~~L~e~~~f~sG~~  245 (253)
T KOG1204|consen  217 ESGQLLDPQVTAKVLAKLLEKGDFVSGQH  245 (253)
T ss_pred             hcCCcCChhhHHHHHHHHHHhcCcccccc
Confidence            12235788888888888888764334443

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.05  E-value=1.3e-09  Score=96.57  Aligned_cols=173  Identities=14%  Similarity=0.102  Sum_probs=122.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC-----CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCC
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLG-----FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK  153 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G-----~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d  153 (380)
                      +.|.+||||+++++|..|+.+|++..     .++.+.+|+.+++++.-..++..--         ...-+++++..|+++
T Consensus         2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p---------~~~i~~~yvlvD~sN   72 (341)
T KOG1478|consen    2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHP---------KSTIEVTYVLVDVSN   72 (341)
T ss_pred             CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCC---------CceeEEEEEEEehhh
Confidence            45789999999999999999999874     3466778999999988877765421         112578999999999


Q ss_pred             hhcHHHHh-------cCCCEEEEccccCccccC---------------------------------CCCCcchhhHHHHH
Q 016901          154 RVQIEPAL-------GNASVVICCIGASEKEVF---------------------------------DITGPYRIDFQATK  193 (380)
Q Consensus       154 ~~~~~~a~-------~~~d~Vi~~Ag~~~~~~~---------------------------------~~~~~~~~nv~g~~  193 (380)
                      ..++..|.       ...|.|+.|||.......                                 +....++.||.|..
T Consensus        73 m~Sv~~A~~di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhf  152 (341)
T KOG1478|consen   73 MQSVFRASKDIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHF  152 (341)
T ss_pred             HHHHHHHHHHHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchh
Confidence            87777665       568999999997532211                                 11223788999988


Q ss_pred             HHHHHHHHc----CCCEEEEEccCCCCCCCCch---hhhchhhHHHHHHHHHHHHH----H---HCCCCEEEEecCcccC
Q 016901          194 NLVDAATIA----KVNHFIMVSSLGTNKFGFPA---AILNLFWGVLLWKRKAEEAL----I---ASGLPYTIVRPGGMER  259 (380)
Q Consensus       194 ~ll~a~~~~----~v~r~V~~SS~~~~~~~~~~---~~~~~~~~Y~~sK~~~E~~l----~---~~g~~~~ivRpg~v~g  259 (380)
                      .+++.....    ....+|.+||..+.......   .......+|..||++.+-+-    +   ..|+.-.++.||....
T Consensus       153 yli~~l~pll~~~~~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt  232 (341)
T KOG1478|consen  153 YLIRELEPLLCHSDNPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTT  232 (341)
T ss_pred             hhHhhhhhHhhcCCCCeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeec
Confidence            888765432    23489999997764433221   22334456999999887432    1   2567778888887654


Q ss_pred             C
Q 016901          260 P  260 (380)
Q Consensus       260 p  260 (380)
                      .
T Consensus       233 ~  233 (341)
T KOG1478|consen  233 N  233 (341)
T ss_pred             c
Confidence            3

>PTZ00325 malate dehydrogenase; Provisional

Probab=99.01  E-value=1.9e-09  Score=102.08  Aligned_cols=167  Identities=14%  Similarity=-0.014  Sum_probs=109.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G--~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~  155 (380)
                      .++++|+|+|++|.||+.++..|+.++  .++++++++....+.+  .+..               ........+.+|+.
T Consensus         6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~--Dl~~---------------~~~~~~v~~~td~~   68 (321)
T PTZ00325          6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAA--DLSH---------------IDTPAKVTGYADGE   68 (321)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCccccc--chhh---------------cCcCceEEEecCCC
Confidence            367799999999999999999998766  6899998833221110  1100               01123345666766


Q ss_pred             cHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCC-------Cchhhhchh
Q 016901          156 QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-------FPAAILNLF  228 (380)
Q Consensus       156 ~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~-------~~~~~~~~~  228 (380)
                      ++.++++++|+||++||.......+....+..|+..++++++++++++++++|+++|..++...       ......++.
T Consensus        69 ~~~~~l~gaDvVVitaG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvdv~~~~~~~~~~~~sg~p~~  148 (321)
T PTZ00325         69 LWEKALRGADLVLICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVNSTVPIAAETLKKAGVYDPR  148 (321)
T ss_pred             chHHHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHHHhhhhhccCCChh
Confidence            6678999999999999976443334455688899999999999999999999999996552211       011111222


Q ss_pred             hHHHHHHHHHH---HH-HHHCCCCEEEEecCcccCCCc
Q 016901          229 WGVLLWKRKAE---EA-LIASGLPYTIVRPGGMERPTD  262 (380)
Q Consensus       229 ~~Y~~sK~~~E---~~-l~~~g~~~~ivRpg~v~gp~~  262 (380)
                      .-||.+-+..-   .+ .+..++...-|+ ++|.|.++
T Consensus       149 ~viG~g~LDs~R~r~~la~~l~v~~~~V~-~~VlGeHG  185 (321)
T PTZ00325        149 KLFGVTTLDVVRARKFVAEALGMNPYDVN-VPVVGGHS  185 (321)
T ss_pred             heeechhHHHHHHHHHHHHHhCcChhheE-EEEEeecC
Confidence            33444311111   11 234677777777 88888754

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.92  E-value=8e-09  Score=99.27  Aligned_cols=99  Identities=19%  Similarity=0.201  Sum_probs=82.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      +|+|||.|| |+||+.+++.|+++| .+|++.+|+.++..+.....                .++++.++.|+.|.+++.
T Consensus         1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~----------------~~~v~~~~vD~~d~~al~   63 (389)
T COG1748           1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELI----------------GGKVEALQVDAADVDALV   63 (389)
T ss_pred             CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhc----------------cccceeEEecccChHHHH
Confidence            468999997 999999999999999 89999999998887765421                147999999999999999


Q ss_pred             HHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEcc
Q 016901          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS  212 (380)
                      +++++.|+|||++....                ...++++|.++|+ ++|=+|-
T Consensus        64 ~li~~~d~VIn~~p~~~----------------~~~i~ka~i~~gv-~yvDts~  100 (389)
T COG1748          64 ALIKDFDLVINAAPPFV----------------DLTILKACIKTGV-DYVDTSY  100 (389)
T ss_pred             HHHhcCCEEEEeCCchh----------------hHHHHHHHHHhCC-CEEEccc
Confidence            99999999999986431                3368888888886 4555553

>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]

Probab=98.91  E-value=2.6e-09  Score=93.26  Aligned_cols=222  Identities=12%  Similarity=0.022  Sum_probs=133.6

Q ss_pred             CCCeEEEEcCCChHHHHHHH-----HHHHCC----CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEc
Q 016901           79 DDNLAFVAGATGKVGSRTVR-----ELLKLG----FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVEC  149 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~-----~Ll~~G----~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  149 (380)
                      +.+..++-+++|+|+..|..     ++-+.+    |.|++++|.+.+.                         ++++-..
T Consensus        11 ~sr~a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~~-------------------------ritw~el   65 (315)
T KOG3019|consen   11 KSRDAVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGKA-------------------------RITWPEL   65 (315)
T ss_pred             ccccCCCCccccchhccccCcccccccCCCCcccccceEEEecCCCCc-------------------------ccccchh
Confidence            34567788999999988876     443334    8999999998753                         3333333


Q ss_pred             CCCChhcHHHHhcCCCEEEEccccCccccCCCCCcchhhH-----HHHHHHHHHHHHcC--CCEEEEEccCCCCCCCCch
Q 016901          150 DLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDF-----QATKNLVDAATIAK--VNHFIMVSSLGTNKFGFPA  222 (380)
Q Consensus       150 Dl~d~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv-----~g~~~ll~a~~~~~--v~r~V~~SS~~~~~~~~~~  222 (380)
                      |..-..  -....++.++.+|+...-.   .+...++-|+     ..+..+.++...+.  .+.+|.+|..+++......
T Consensus        66 ~~~Gip--~sc~a~vna~g~n~l~P~r---RWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~  140 (315)
T KOG3019|consen   66 DFPGIP--ISCVAGVNAVGNNALLPIR---RWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSESQ  140 (315)
T ss_pred             cCCCCc--eehHHHHhhhhhhccCchh---hcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEecccccc
Confidence            322111  0111233444444443211   2222244444     44778888887665  4578999987764432111


Q ss_pred             -----hhhchhhHHH--HHHHHHHHHHHHCCCCEEEEecCcccCCCccccccc--ceeeccCC-----cccCCCCCHHHH
Q 016901          223 -----AILNLFWGVL--LWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETH--NITLSQED-----TLFGGQVSNLQV  288 (380)
Q Consensus       223 -----~~~~~~~~Y~--~sK~~~E~~l~~~g~~~~ivRpg~v~gp~~~~~~~~--~~~~~~~~-----~~~~~~i~~~Dv  288 (380)
                           .....+.-..  ..||......-....++++||.|.|.|.++--....  .+.++.+.     ..+-.|||++|+
T Consensus       141 eY~e~~~~qgfd~~srL~l~WE~aA~~~~~~~r~~~iR~GvVlG~gGGa~~~M~lpF~~g~GGPlGsG~Q~fpWIHv~DL  220 (315)
T KOG3019|consen  141 EYSEKIVHQGFDILSRLCLEWEGAALKANKDVRVALIRIGVVLGKGGGALAMMILPFQMGAGGPLGSGQQWFPWIHVDDL  220 (315)
T ss_pred             ccccccccCChHHHHHHHHHHHHHhhccCcceeEEEEEEeEEEecCCcchhhhhhhhhhccCCcCCCCCeeeeeeehHHH
Confidence                 1111121111  123333222223568999999999998765221111  12222222     223358999999


Q ss_pred             HHHHHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCCCCC
Q 016901          289 AELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (380)
Q Consensus       289 A~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~~  332 (380)
                      +..+..+++++..  .+++|-+.++..+..|+.+.+...++...
T Consensus       221 ~~li~~ale~~~v--~GViNgvAP~~~~n~Ef~q~lg~aL~Rp~  262 (315)
T KOG3019|consen  221 VNLIYEALENPSV--KGVINGVAPNPVRNGEFCQQLGSALSRPS  262 (315)
T ss_pred             HHHHHHHHhcCCC--CceecccCCCccchHHHHHHHHHHhCCCc
Confidence            9999999999876  78899999999999999999998887643

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=98.85  E-value=3.7e-08  Score=93.90  Aligned_cols=164  Identities=15%  Similarity=0.091  Sum_probs=100.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC-------CeEEEEeCCchh--HHHHHHHHHhhhhcccccccCCCCCCceEEEEcCC
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLG-------FRVRAGVRSVQR--AENLVQSVKQMKLDGELANKGIQPVEMLELVECDL  151 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G-------~~V~~l~R~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl  151 (380)
                      .+|+||||+|+||++++..|+..+       .+|+++++++..  +....-.+.                .-.....+|+
T Consensus         3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~----------------d~~~~~~~~~   66 (325)
T cd01336           3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQ----------------DCAFPLLKSV   66 (325)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehh----------------hccccccCCc
Confidence            479999999999999999999855       489999996532  211100000                0000223355


Q ss_pred             CChhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcC-CC-EEEEEccCCCC-------C--CCC
Q 016901          152 EKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK-VN-HFIMVSSLGTN-------K--FGF  220 (380)
Q Consensus       152 ~d~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~-v~-r~V~~SS~~~~-------~--~~~  220 (380)
                      ....++.++++++|+|||+||.......+....++.|+.-.+.+.+.+.++. .. .++.+|. -++       .  .+.
T Consensus        67 ~~~~~~~~~l~~aDiVI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsN-PvD~~t~~~~k~~~~~  145 (325)
T cd01336          67 VATTDPEEAFKDVDVAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGN-PANTNALILLKYAPSI  145 (325)
T ss_pred             eecCCHHHHhCCCCEEEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecC-cHHHHHHHHHHHcCCC
Confidence            5556778899999999999997655444445668899999999998888774 34 4555553 110       0  011


Q ss_pred             chhhhchhhHHHHHHHHHHHHHHHCCCCEEEEecCcccCCCc
Q 016901          221 PAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTD  262 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~~g~~~~ivRpg~v~gp~~  262 (380)
                      +.... ....+..+.++-..+.+..+++..-|+-..|.|..+
T Consensus       146 ~~~~i-g~gt~LDs~R~r~~la~~l~v~~~~v~~~~V~GeHG  186 (325)
T cd01336         146 PKENF-TALTRLDHNRAKSQIALKLGVPVSDVKNVIIWGNHS  186 (325)
T ss_pred             CHHHE-EeeehHHHHHHHHHHHHHhCcChhhceEeEEEEcCC
Confidence            11110 011233444444444555777777776666767643

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=98.83  E-value=1.3e-07  Score=90.64  Aligned_cols=161  Identities=11%  Similarity=0.067  Sum_probs=99.6

Q ss_pred             CCCeEEEEcCCChHHHH--HHHHHHHCCCeEEEEeCCchhH------------HHHHHHHHhhhhcccccccCCCCCCce
Q 016901           79 DDNLAFVAGATGKVGSR--TVRELLKLGFRVRAGVRSVQRA------------ENLVQSVKQMKLDGELANKGIQPVEML  144 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~--lv~~Ll~~G~~V~~l~R~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~v  144 (380)
                      .+|++|||||++++|.+  +++.| +.|++|+++.+..++.            ....+.++..+             ..+
T Consensus        40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G-------------~~a  105 (398)
T PRK13656         40 GPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAG-------------LYA  105 (398)
T ss_pred             CCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcC-------------Cce
Confidence            56899999999999999  89999 9999998888543221            12222222211             346


Q ss_pred             EEEEcCCCChhcHHHHh-------cCCCEEEEccccCccccC---------------CCC-----------------Cc-
Q 016901          145 ELVECDLEKRVQIEPAL-------GNASVVICCIGASEKEVF---------------DIT-----------------GP-  184 (380)
Q Consensus       145 ~~~~~Dl~d~~~~~~a~-------~~~d~Vi~~Ag~~~~~~~---------------~~~-----------------~~-  184 (380)
                      ..+.+|+++.+++++++       +++|.||||+|.......               ...                 .. 
T Consensus       106 ~~i~~DVss~E~v~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~  185 (398)
T PRK13656        106 KSINGDAFSDEIKQKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPAT  185 (398)
T ss_pred             EEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCC
Confidence            78899999988777665       569999999986522110               000                 00 


Q ss_pred             -----chhhHHHHHH---HHHHHHHcC----CCEEEEEccCCCCCCCCchhhhchh--hHHHHHHHHHHHHHH-------
Q 016901          185 -----YRIDFQATKN---LVDAATIAK----VNHFIMVSSLGTNKFGFPAAILNLF--WGVLLWKRKAEEALI-------  243 (380)
Q Consensus       185 -----~~~nv~g~~~---ll~a~~~~~----v~r~V~~SS~~~~~~~~~~~~~~~~--~~Y~~sK~~~E~~l~-------  243 (380)
                           ..+++.|...   -+++....+    -.++|-+|..|...      ..+.+  ..-+..|..+|...+       
T Consensus       186 ~~ei~~Tv~vMggedw~~Wi~al~~a~lla~g~~~va~TY~G~~~------t~p~Y~~g~mG~AKa~LE~~~r~La~~L~  259 (398)
T PRK13656        186 EEEIADTVKVMGGEDWELWIDALDEAGVLAEGAKTVAYSYIGPEL------THPIYWDGTIGKAKKDLDRTALALNEKLA  259 (398)
T ss_pred             HHHHHHHHHhhccchHHHHHHHHHhcccccCCcEEEEEecCCcce------eecccCCchHHHHHHHHHHHHHHHHHHhh
Confidence                 1123444322   222333332    13677777665421      11111  135789999997665       


Q ss_pred             HCCCCEEEEecCcccC
Q 016901          244 ASGLPYTIVRPGGMER  259 (380)
Q Consensus       244 ~~g~~~~ivRpg~v~g  259 (380)
                      ..|+++.++-.|.+..
T Consensus       260 ~~giran~i~~g~~~T  275 (398)
T PRK13656        260 AKGGDAYVSVLKAVVT  275 (398)
T ss_pred             hcCCEEEEEecCcccc
Confidence            2688999998888754

>PLN00106 malate dehydrogenase

Probab=98.82  E-value=2.5e-08  Score=94.55  Aligned_cols=163  Identities=16%  Similarity=-0.011  Sum_probs=105.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G--~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      .+|+|+||+|.||..++..|+.++  .+++++++++..... .+ +..               ........++.+.+++.
T Consensus        19 ~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a-~D-l~~---------------~~~~~~i~~~~~~~d~~   81 (323)
T PLN00106         19 FKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVA-AD-VSH---------------INTPAQVRGFLGDDQLG   81 (323)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeE-ch-hhh---------------CCcCceEEEEeCCCCHH
Confidence            589999999999999999999877  479999887721111 00 100               11112233544556688


Q ss_pred             HHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCC-------CchhhhchhhHH
Q 016901          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-------FPAAILNLFWGV  231 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~-------~~~~~~~~~~~Y  231 (380)
                      ++++++|+|||+||.......+.......|+..++++++.+++++.+.+|+++|--++...       ......++...|
T Consensus        82 ~~l~~aDiVVitAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPvD~~~~i~t~~~~~~s~~p~~~vi  161 (323)
T PLN00106         82 DALKGADLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPVNSTVPIAAEVLKKAGVYDPKKLF  161 (323)
T ss_pred             HHcCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCCCCcceEE
Confidence            8999999999999976544344555678899999999999999999999999986543100       000112223335


Q ss_pred             HHHHHHHHHHH----HHCCCCEEEEecCcccCCC
Q 016901          232 LLWKRKAEEAL----IASGLPYTIVRPGGMERPT  261 (380)
Q Consensus       232 ~~sK~~~E~~l----~~~g~~~~ivRpg~v~gp~  261 (380)
                      +.++...+++-    +..|++..-| -++|+|.+
T Consensus       162 G~~~LDs~Rl~~~lA~~lgv~~~~V-~~~ViGeH  194 (323)
T PLN00106        162 GVTTLDVVRANTFVAEKKGLDPADV-DVPVVGGH  194 (323)
T ss_pred             EEecchHHHHHHHHHHHhCCChhhe-EEEEEEeC
Confidence            55555554432    2467766655 34555543

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=98.73  E-value=9.5e-07  Score=77.80  Aligned_cols=214  Identities=13%  Similarity=0.161  Sum_probs=131.3

Q ss_pred             CCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh
Q 016901           78 KDDNLAFVAGAT--GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (380)
Q Consensus        78 ~~~~~vlVtGat--G~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~  155 (380)
                      +++|++||+|-.  -.|+..+++.|.+.|.++.....++.-..++.+..+.+              ..-.+++||+++.+
T Consensus         4 L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e~l~krv~~la~~~--------------~s~~v~~cDV~~d~   69 (259)
T COG0623           4 LEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEEL--------------GSDLVLPCDVTNDE   69 (259)
T ss_pred             cCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHHHhhc--------------cCCeEEecCCCCHH
Confidence            578999999864  58999999999999999988887763222222222221              23457899999988


Q ss_pred             cHHHHh-------cCCCEEEEccccCccccC--C--------CCCcchhhHHHHHHHHHHHHHc--CCCEEEEEccCCCC
Q 016901          156 QIEPAL-------GNASVVICCIGASEKEVF--D--------ITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTN  216 (380)
Q Consensus       156 ~~~~a~-------~~~d~Vi~~Ag~~~~~~~--~--------~~~~~~~nv~g~~~ll~a~~~~--~v~r~V~~SS~~~~  216 (380)
                      +++++|       ++.|.|+|+.|..+.+..  +        +...+++-..+...+.++++..  +-..+|-++=.+..
T Consensus        70 ~i~~~f~~i~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlgs~  149 (259)
T COG0623          70 SIDALFATIKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLGSE  149 (259)
T ss_pred             HHHHHHHHHHHhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEeccce
Confidence            888776       568999999986543211  1        1111333344444455555421  11345555433331


Q ss_pred             CCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccC-----CCcccccccceeeccCCcccCCCCC
Q 016901          217 KFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMER-----PTDAYKETHNITLSQEDTLFGGQVS  284 (380)
Q Consensus       217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~g-----p~~~~~~~~~~~~~~~~~~~~~~i~  284 (380)
                            ...+.++.-+..|+..|.-+|       ..|+|++.|--|.|-.     =.+ +  ..-+.........+..+.
T Consensus       150 ------r~vPnYNvMGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~~-f--~~~l~~~e~~aPl~r~vt  220 (259)
T COG0623         150 ------RVVPNYNVMGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIGD-F--RKMLKENEANAPLRRNVT  220 (259)
T ss_pred             ------eecCCCchhHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhcccc-H--HHHHHHHHhhCCccCCCC
Confidence                  112223346789999996655       2689999998888731     111 0  001111222233445689


Q ss_pred             HHHHHHHHHHHHhCCC-CccCcEEEEecCCC
Q 016901          285 NLQVAELLACMAKNRS-LSYCKVVEVIAETT  314 (380)
Q Consensus       285 ~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~~  314 (380)
                      .+||+.....++.+-. ...|++.++-+|-.
T Consensus       221 ~eeVG~tA~fLlSdLssgiTGei~yVD~G~~  251 (259)
T COG0623         221 IEEVGNTAAFLLSDLSSGITGEIIYVDSGYH  251 (259)
T ss_pred             HHHhhhhHHHHhcchhcccccceEEEcCCce
Confidence            9999999999987632 24577877776653

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.69  E-value=1.1e-07  Score=93.08  Aligned_cols=76  Identities=33%  Similarity=0.503  Sum_probs=61.3

Q ss_pred             EEEEcCCChHHHHHHHHHHHCC-C-eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           83 AFVAGATGKVGSRTVRELLKLG-F-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        83 vlVtGatG~iG~~lv~~Ll~~G-~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      |+|.|| |++|+.+++.|++++ + +|++.+|+.++++++.+.+               ...++.+++.|+.|.+++.++
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~---------------~~~~~~~~~~d~~~~~~l~~~   64 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL---------------LGDRVEAVQVDVNDPESLAEL   64 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT-----------------TTTTEEEEE--TTTHHHHHHH
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc---------------cccceeEEEEecCCHHHHHHH
Confidence            799999 999999999999997 4 8999999999888775432               126899999999999999999


Q ss_pred             hcCCCEEEEccccC
Q 016901          161 LGNASVVICCIGAS  174 (380)
Q Consensus       161 ~~~~d~Vi~~Ag~~  174 (380)
                      ++++|+||||+|..
T Consensus        65 ~~~~dvVin~~gp~   78 (386)
T PF03435_consen   65 LRGCDVVINCAGPF   78 (386)
T ss_dssp             HTTSSEEEE-SSGG
T ss_pred             HhcCCEEEECCccc
Confidence            99999999999864

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.64  E-value=2.3e-07  Score=82.04  Aligned_cols=81  Identities=26%  Similarity=0.253  Sum_probs=66.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      .+++++|+||+|.+|+.+++.|++.|++|+++.|+.++.+.+.+.+...              .+..+..+|+.+.+++.
T Consensus        27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~--------------~~~~~~~~~~~~~~~~~   92 (194)
T cd01078          27 KGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRAR--------------FGEGVGAVETSDDAARA   92 (194)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhh--------------cCCcEEEeeCCCHHHHH
Confidence            5689999999999999999999999999999999988877766544311              23456677888888889


Q ss_pred             HHhcCCCEEEEcccc
Q 016901          159 PALGNASVVICCIGA  173 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~  173 (380)
                      +++.++|+||++.+.
T Consensus        93 ~~~~~~diVi~at~~  107 (194)
T cd01078          93 AAIKGADVVFAAGAA  107 (194)
T ss_pred             HHHhcCCEEEECCCC
Confidence            999999999997653

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.60  E-value=1.9e-07  Score=86.96  Aligned_cols=85  Identities=18%  Similarity=0.345  Sum_probs=69.5

Q ss_pred             eEEEEcCCChHHHHHHHHHHH----CCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           82 LAFVAGATGKVGSRTVRELLK----LGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        82 ~vlVtGatG~iG~~lv~~Ll~----~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      .++|.||+||.|.++++++++    .|...-+..|++.++++..+.+..-.        +.. .....++.+|..|++++
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~--------~~~-ls~~~i~i~D~~n~~Sl   77 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKT--------GTD-LSSSVILIADSANEASL   77 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhcc--------CCC-cccceEEEecCCCHHHH
Confidence            589999999999999999999    67888888999999888776554321        111 13333899999999999


Q ss_pred             HHHhcCCCEEEEccccCc
Q 016901          158 EPALGNASVVICCIGASE  175 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag~~~  175 (380)
                      .+..+.+.+|+||+|+..
T Consensus        78 ~emak~~~vivN~vGPyR   95 (423)
T KOG2733|consen   78 DEMAKQARVIVNCVGPYR   95 (423)
T ss_pred             HHHHhhhEEEEeccccce
Confidence            999999999999999764

>PRK05086 malate dehydrogenase; Provisional

Probab=98.53  E-value=6e-07  Score=85.18  Aligned_cols=116  Identities=19%  Similarity=0.167  Sum_probs=80.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHH-C--CCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           81 NLAFVAGATGKVGSRTVRELLK-L--GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~-~--G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      |+|+|+||+|.||++++..|.. .  ++.+++++|++.. ....-.+.              ..+....+.+  .+.+++
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~-~g~alDl~--------------~~~~~~~i~~--~~~~d~   63 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVT-PGVAVDLS--------------HIPTAVKIKG--FSGEDP   63 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCC-cceehhhh--------------cCCCCceEEE--eCCCCH
Confidence            5899999999999999988855 2  3678888887432 11000000              0011122333  224456


Q ss_pred             HHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccC
Q 016901          158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL  213 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~  213 (380)
                      .+.++++|+||.++|.......+....+..|.....++++++++.+.+++|.+.|-
T Consensus        64 ~~~l~~~DiVIitaG~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvsN  119 (312)
T PRK05086         64 TPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIITN  119 (312)
T ss_pred             HHHcCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccC
Confidence            67788999999999975443334455578899999999999999999999988873

>PRK09620 hypothetical protein; Provisional

Probab=98.48  E-value=2.1e-07  Score=84.12  Aligned_cols=185  Identities=12%  Similarity=0.034  Sum_probs=100.1

Q ss_pred             CCCeEEEEcCC----------------ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCC
Q 016901           79 DDNLAFVAGAT----------------GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVE  142 (380)
Q Consensus        79 ~~~~vlVtGat----------------G~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (380)
                      .+++||||+|.                ||+|++|+++|+++|++|+++.+.........                 ....
T Consensus         2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~-----------------~~~~   64 (229)
T PRK09620          2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDI-----------------NNQL   64 (229)
T ss_pred             CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCccc-----------------CCce
Confidence            57899999875                99999999999999999999876422110000                 0002


Q ss_pred             ceEEEEcCCCChhcHHHHhc--CCCEEEEccccCccccCCC--------------C--CcchhhHHHHHHHHHHHHHcCC
Q 016901          143 MLELVECDLEKRVQIEPALG--NASVVICCIGASEKEVFDI--------------T--GPYRIDFQATKNLVDAATIAKV  204 (380)
Q Consensus       143 ~v~~~~~Dl~d~~~~~~a~~--~~d~Vi~~Ag~~~~~~~~~--------------~--~~~~~nv~g~~~ll~a~~~~~v  204 (380)
                      .+..+.+|....+.+.+++.  ++|+|||+|+..++.+...              .  ....+.+.-+-.++..+++...
T Consensus        65 ~~~~V~s~~d~~~~l~~~~~~~~~D~VIH~AAvsD~~~~~~~~~~~~~~~~~~Ki~~~~~~~l~L~~~pdIl~~l~~~~~  144 (229)
T PRK09620         65 ELHPFEGIIDLQDKMKSIITHEKVDAVIMAAAGSDWVVDKICDQEGNVLDMNGKISSDIAPIIHFQKAPKVLKQIKQWDP  144 (229)
T ss_pred             eEEEEecHHHHHHHHHHHhcccCCCEEEECccccceecccccccccccccccCCCcCCCCCeEEEEECcHHHHHHHhhCC
Confidence            34455664433467777784  6899999999765433210              0  0112333334456666654332


Q ss_pred             CEEEEEccCCCCCCCCchhhhchhhHHHHHHHHHHHHHHHCCCCEEEEecC-cccCCCcccccccceeeccCCcccCCCC
Q 016901          205 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPG-GMERPTDAYKETHNITLSQEDTLFGGQV  283 (380)
Q Consensus       205 ~r~V~~SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~g~~~~ivRpg-~v~gp~~~~~~~~~~~~~~~~~~~~~~i  283 (380)
                      +.+ .++=..-  ....         +-.--..+..-++.+++++++...- ..+|-.     .....+....... ...
T Consensus       145 ~~~-~vGFkaE--t~~~---------~~~l~~~A~~kl~~k~~D~ivaN~~~~~~g~~-----~~~~ii~~~~~~~-~~~  206 (229)
T PRK09620        145 ETV-LVGFKLE--SDVN---------EEELFERAKNRMEEAKASVMIANSPHSLYSRG-----AMHYVIGQDGKGQ-LCN  206 (229)
T ss_pred             CCE-EEEEEec--cCCC---------HHHHHHHHHHHHHHcCCCEEEECCcccccCCC-----cEEEEEeCCCccc-cCC
Confidence            222 2221111  0000         0011122344455688888877653 222221     1223333332222 346


Q ss_pred             CHHHHHHHHHHHHhC
Q 016901          284 SNLQVAELLACMAKN  298 (380)
Q Consensus       284 ~~~DvA~~i~~~l~~  298 (380)
                      +-.++|..++..+.+
T Consensus       207 ~K~~iA~~i~~~i~~  221 (229)
T PRK09620        207 GKDETAKEIVKRLEV  221 (229)
T ss_pred             CHHHHHHHHHHHHHH
Confidence            778899888877654

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=98.44  E-value=1.1e-06  Score=80.74  Aligned_cols=95  Identities=11%  Similarity=0.049  Sum_probs=71.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      |+|||+||||. |+.|++.|.++|++|++.+++....+.+..                   .+...+..+..|.+++.+.
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~-------------------~g~~~v~~g~l~~~~l~~~   60 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPI-------------------HQALTVHTGALDPQELREF   60 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccc-------------------cCCceEEECCCCHHHHHHH
Confidence            57999999999 999999999999999999998865433221                   2233445566677778888


Q ss_pred             hc--CCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEE
Q 016901          161 LG--NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFI  208 (380)
Q Consensus       161 ~~--~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V  208 (380)
                      +.  ++|+||+.+.+.           .  ..-+.|+.++|++.|+.-+=
T Consensus        61 l~~~~i~~VIDAtHPf-----------A--~~is~~a~~a~~~~~ipylR   97 (256)
T TIGR00715        61 LKRHSIDILVDATHPF-----------A--AQITTNATAVCKELGIPYVR   97 (256)
T ss_pred             HHhcCCCEEEEcCCHH-----------H--HHHHHHHHHHHHHhCCcEEE
Confidence            84  599999987543           2  24578899999998876333

This enzyme was found to be a monomer by gel filtration.

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.41  E-value=4.7e-07  Score=82.05  Aligned_cols=72  Identities=19%  Similarity=0.299  Sum_probs=51.3

Q ss_pred             EEE-cCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCC--hhcHHHH
Q 016901           84 FVA-GATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK--RVQIEPA  160 (380)
Q Consensus        84 lVt-GatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d--~~~~~~a  160 (380)
                      .|| .+|||+|++|+++|+++|++|+++.|......                    ....+++++.++-.+  .+.+.+.
T Consensus        19 ~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~--------------------~~~~~v~~i~v~s~~~m~~~l~~~   78 (229)
T PRK06732         19 GITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKP--------------------EPHPNLSIIEIENVDDLLETLEPL   78 (229)
T ss_pred             eecCccchHHHHHHHHHHHhCCCEEEEEECcccccC--------------------CCCCCeEEEEEecHHHHHHHHHHH
Confidence            444 67899999999999999999999987642110                    001356666654332  2456667


Q ss_pred             hcCCCEEEEccccCc
Q 016901          161 LGNASVVICCIGASE  175 (380)
Q Consensus       161 ~~~~d~Vi~~Ag~~~  175 (380)
                      ++++|+||||||...
T Consensus        79 ~~~~DivIh~AAvsd   93 (229)
T PRK06732         79 VKDHDVLIHSMAVSD   93 (229)
T ss_pred             hcCCCEEEeCCccCC
Confidence            788999999999754

>cd00704 MDH Malate dehydrogenase

Probab=98.37  E-value=2.6e-06  Score=81.11  Aligned_cols=103  Identities=16%  Similarity=0.112  Sum_probs=74.6

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCC-------eEEEEeCCc--hhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCC
Q 016901           82 LAFVAGATGKVGSRTVRELLKLGF-------RVRAGVRSV--QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLE  152 (380)
Q Consensus        82 ~vlVtGatG~iG~~lv~~Ll~~G~-------~V~~l~R~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~  152 (380)
                      +|.|+||+|.||+.++..|+..|.       +++++++++  +..+                           ....|+.
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~---------------------------g~~~Dl~   54 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALE---------------------------GVVMELQ   54 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccc---------------------------eeeeehh
Confidence            699999999999999999998762       488888876  3221                           2223333


Q ss_pred             Ch-----------hcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcC-CC-EEEEEc
Q 016901          153 KR-----------VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK-VN-HFIMVS  211 (380)
Q Consensus       153 d~-----------~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~-v~-r~V~~S  211 (380)
                      |.           ....+.++++|+|||+||.......+..+.+..|+.-.+.+...+++.+ .. .++.+|
T Consensus        55 d~~~~~~~~~~i~~~~~~~~~~aDiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvs  126 (323)
T cd00704          55 DCAFPLLKGVVITTDPEEAFKDVDVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVG  126 (323)
T ss_pred             hhcccccCCcEEecChHHHhCCCCEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence            32           3456888999999999997655444455557889999999999998884 55 444444

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.34  E-value=2.5e-06  Score=80.13  Aligned_cols=82  Identities=16%  Similarity=0.141  Sum_probs=63.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEeCCc---hhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCC
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFR-VRAGVRSV---QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK  153 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~-V~~l~R~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d  153 (380)
                      .++++++|+|| |++|++++..|++.|++ |+++.|+.   ++.+++.+.+...             ...+.+...|+++
T Consensus       124 ~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~-------------~~~~~~~~~d~~~  189 (289)
T PRK12548        124 VKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQE-------------VPECIVNVYDLND  189 (289)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhc-------------CCCceeEEechhh
Confidence            35689999998 89999999999999985 99999987   5555555443221             1345566789988


Q ss_pred             hhcHHHHhcCCCEEEEcccc
Q 016901          154 RVQIEPALGNASVVICCIGA  173 (380)
Q Consensus       154 ~~~~~~a~~~~d~Vi~~Ag~  173 (380)
                      .+++.+.+..+|+||||...
T Consensus       190 ~~~~~~~~~~~DilINaTp~  209 (289)
T PRK12548        190 TEKLKAEIASSDILVNATLV  209 (289)
T ss_pred             hhHHHhhhccCCEEEEeCCC
Confidence            88888888899999998753

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=98.34  E-value=1.2e-05  Score=67.30  Aligned_cols=115  Identities=17%  Similarity=0.119  Sum_probs=81.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G--~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      |+|.|+||+|.+|++++..|+..+  .+++++++++++++.....+.......         .....+..       ...
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~---------~~~~~i~~-------~~~   64 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPL---------PSPVRITS-------GDY   64 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGS---------TEEEEEEE-------SSG
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhc---------cccccccc-------ccc
Confidence            579999999999999999999987  579999999887776665555432110         01222222       224


Q ss_pred             HHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCC-EEEEEc
Q 016901          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVS  211 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~-r~V~~S  211 (380)
                      +.++++|+||.+||.......+..+.++.|..-.+.+.+.+.+.+.+ .++.+|
T Consensus        65 ~~~~~aDivvitag~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivvt  118 (141)
T PF00056_consen   65 EALKDADIVVITAGVPRKPGMSRLDLLEANAKIVKEIAKKIAKYAPDAIVIVVT  118 (141)
T ss_dssp             GGGTTESEEEETTSTSSSTTSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-S
T ss_pred             cccccccEEEEeccccccccccHHHHHHHhHhHHHHHHHHHHHhCCccEEEEeC
Confidence            56679999999999764433344445788999999999999888755 444443

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=98.29  E-value=4.7e-06  Score=79.39  Aligned_cols=105  Identities=16%  Similarity=0.100  Sum_probs=74.9

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCC-------eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCCh
Q 016901           82 LAFVAGATGKVGSRTVRELLKLGF-------RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (380)
Q Consensus        82 ~vlVtGatG~iG~~lv~~Ll~~G~-------~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~  154 (380)
                      +|.|+||+|.||..++..|+..|.       ++++++++++.                         +..+....|+.|.
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~-------------------------~~a~g~~~Dl~d~   55 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAM-------------------------KVLEGVVMELMDC   55 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcc-------------------------cccceeEeehhcc
Confidence            489999999999999999998663       58888886542                         1122233444443


Q ss_pred             h-----------cHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcC-CC-EEEEEc
Q 016901          155 V-----------QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK-VN-HFIMVS  211 (380)
Q Consensus       155 ~-----------~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~-v~-r~V~~S  211 (380)
                      .           ...+.++++|+|||+||.......+....+..|+.-.+.+.+.+.++. .. .++.+|
T Consensus        56 ~~~~~~~~~~~~~~~~~~~~aDiVVitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvs  125 (324)
T TIGR01758        56 AFPLLDGVVPTHDPAVAFTDVDVAILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVG  125 (324)
T ss_pred             cchhcCceeccCChHHHhCCCCEEEEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence            2           345788999999999997654433455567889999999999999884 54 444444

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=98.28  E-value=3.4e-06  Score=80.26  Aligned_cols=166  Identities=10%  Similarity=0.007  Sum_probs=104.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC-------eEEEEeCCchh--HHHHHHHHHhhhhcccccccCCCCCCceEEEEcC
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGF-------RVRAGVRSVQR--AENLVQSVKQMKLDGELANKGIQPVEMLELVECD  150 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~-------~V~~l~R~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  150 (380)
                      .++|.|+||+|.||..++..|+..|.       ++++++.+++.  +....-.+.....         ....++++.   
T Consensus         2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~---------~~~~~~~i~---   69 (322)
T cd01338           2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAF---------PLLAEIVIT---   69 (322)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccc---------cccCceEEe---
Confidence            35899999999999999999998873       68888885432  3322221111000         000122221   


Q ss_pred             CCChhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCC-C-EEEEEccCCCCC--CC-Cchh-h
Q 016901          151 LEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKV-N-HFIMVSSLGTNK--FG-FPAA-I  224 (380)
Q Consensus       151 l~d~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v-~-r~V~~SS~~~~~--~~-~~~~-~  224 (380)
                          ....+.++++|+||.+||.......+..+.++.|+.-.+.+...+.+.+. . .++.+|. -++-  +. .... -
T Consensus        70 ----~~~~~~~~daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsN-PvD~~t~~~~k~sg~  144 (322)
T cd01338          70 ----DDPNVAFKDADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGN-PCNTNALIAMKNAPD  144 (322)
T ss_pred             ----cCcHHHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecC-cHHHHHHHHHHHcCC
Confidence                12246788999999999976544344455578899999999999988773 5 4455542 1100  00 0001 0


Q ss_pred             hchhhHHHHHHHHHHHHHH----HCCCCEEEEecCcccCCCc
Q 016901          225 LNLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTD  262 (380)
Q Consensus       225 ~~~~~~Y~~sK~~~E~~l~----~~g~~~~ivRpg~v~gp~~  262 (380)
                      .++...|+.+++..+++..    ..|++...+|..+|+|+++
T Consensus       145 ~p~~~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeHG  186 (322)
T cd01338         145 IPPDNFTAMTRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNHS  186 (322)
T ss_pred             CChHheEEehHHHHHHHHHHHHHHhCcChhHeEEEEEEeCCc
Confidence            2233457777777776643    4789999999999999864

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.26  E-value=3.3e-06  Score=80.36  Aligned_cols=73  Identities=25%  Similarity=0.276  Sum_probs=56.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHC-C-CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKL-G-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~-G-~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~  155 (380)
                      ..+++|+||||+|+||+.++++|+++ | .+++++.|+..++..+..++                      ..+|+.   
T Consensus       153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el----------------------~~~~i~---  207 (340)
T PRK14982        153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAEL----------------------GGGKIL---  207 (340)
T ss_pred             cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHh----------------------ccccHH---
Confidence            46789999999999999999999865 5 68999999987766654321                      123333   


Q ss_pred             cHHHHhcCCCEEEEccccCc
Q 016901          156 QIEPALGNASVVICCIGASE  175 (380)
Q Consensus       156 ~~~~a~~~~d~Vi~~Ag~~~  175 (380)
                      ++.+++.++|+|||+++...
T Consensus       208 ~l~~~l~~aDiVv~~ts~~~  227 (340)
T PRK14982        208 SLEEALPEADIVVWVASMPK  227 (340)
T ss_pred             hHHHHHccCCEEEECCcCCc
Confidence            36688899999999998653

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=98.24  E-value=3.2e-06  Score=78.28  Aligned_cols=79  Identities=22%  Similarity=0.275  Sum_probs=64.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ....++|-|||||.|..++++|+++|.+-.+..|+..++..+...+.                +...  ..++-+++.++
T Consensus         5 ~e~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG----------------~~~~--~~p~~~p~~~~   66 (382)
T COG3268           5 REYDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLG----------------PEAA--VFPLGVPAALE   66 (382)
T ss_pred             cceeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcC----------------cccc--ccCCCCHHHHH
Confidence            34579999999999999999999999988888999999888776432                2232  33444488999


Q ss_pred             HHhcCCCEEEEccccCc
Q 016901          159 PALGNASVVICCIGASE  175 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~  175 (380)
                      +.+.++++|+||+|+..
T Consensus        67 ~~~~~~~VVlncvGPyt   83 (382)
T COG3268          67 AMASRTQVVLNCVGPYT   83 (382)
T ss_pred             HHHhcceEEEecccccc
Confidence            99999999999999763

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.21  E-value=4.7e-06  Score=81.45  Aligned_cols=180  Identities=13%  Similarity=0.106  Sum_probs=102.1

Q ss_pred             CCCCeEEEEcC----------------CChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCC
Q 016901           78 KDDNLAFVAGA----------------TGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPV  141 (380)
Q Consensus        78 ~~~~~vlVtGa----------------tG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (380)
                      +.+++||||||                +|.+|.+++++|+++|++|+++.++.+ ...                     .
T Consensus       186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~~---------------------~  243 (399)
T PRK05579        186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LPT---------------------P  243 (399)
T ss_pred             cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-ccC---------------------C
Confidence            47899999999                899999999999999999999988652 110                     0


Q ss_pred             CceEEEEcCCCChhcHHHHh----cCCCEEEEccccCccccCCC--------CCcchhhHHHHHHHHHHHHHcCCCEEEE
Q 016901          142 EMLELVECDLEKRVQIEPAL----GNASVVICCIGASEKEVFDI--------TGPYRIDFQATKNLVDAATIAKVNHFIM  209 (380)
Q Consensus       142 ~~v~~~~~Dl~d~~~~~~a~----~~~d~Vi~~Ag~~~~~~~~~--------~~~~~~nv~g~~~ll~a~~~~~v~r~V~  209 (380)
                      .+  +...|+++.+++.+++    +.+|++|||||...+.....        .....+.+.-+..++..+.+...++-+.
T Consensus       244 ~~--~~~~dv~~~~~~~~~v~~~~~~~DilI~~Aav~d~~~~~~~~~Kikk~~~~~~l~L~~~pdIl~~l~~~~~~~~~~  321 (399)
T PRK05579        244 AG--VKRIDVESAQEMLDAVLAALPQADIFIMAAAVADYRPATVAEGKIKKGEGELTLELVPNPDILAEVAALKDKRPFV  321 (399)
T ss_pred             CC--cEEEccCCHHHHHHHHHHhcCCCCEEEEcccccccccccccccCccCCCCCceEEEEeCcHHHHHHHhccCCCCEE
Confidence            12  3457999877666555    56999999999764433211        0011222333445666665443222122


Q ss_pred             EccCCCCCCCCchhhhchhhHHHHHHHHHHHHHHHCCCCEEEEecCcccCCCcccccccceeeccCCc-ccCCCCCHHHH
Q 016901          210 VSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDT-LFGGQVSNLQV  288 (380)
Q Consensus       210 ~SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~-~~~~~i~~~Dv  288 (380)
                      ++=..-      .   +.      ....+.+-+.++++++++...=. .+-+-.......+.+..... ..-...+-.++
T Consensus       322 VGFaaE------t---~~------~~~~A~~kl~~k~~D~ivaN~i~-~~~~fg~~~n~~~ii~~~~~~~~~~~~~K~~i  385 (399)
T PRK05579        322 VGFAAE------T---GD------VLEYARAKLKRKGLDLIVANDVS-AGGGFGSDDNEVTLIWSDGGEVKLPLMSKLEL  385 (399)
T ss_pred             EEEccC------C---ch------HHHHHHHHHHHcCCeEEEEecCC-cCCCcCCCceEEEEEECCCcEEEcCCCCHHHH
Confidence            332111      0   00      11223334456889988777632 11100001122233333222 11244678899


Q ss_pred             HHHHHHHHh
Q 016901          289 AELLACMAK  297 (380)
Q Consensus       289 A~~i~~~l~  297 (380)
                      |+.++..+.
T Consensus       386 A~~i~~~i~  394 (399)
T PRK05579        386 ARRLLDEIA  394 (399)
T ss_pred             HHHHHHHHH
Confidence            999988764

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.10  E-value=9.5e-05  Score=72.10  Aligned_cols=176  Identities=14%  Similarity=0.115  Sum_probs=104.6

Q ss_pred             CCCCeEEEEcC----------------CChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCC
Q 016901           78 KDDNLAFVAGA----------------TGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPV  141 (380)
Q Consensus        78 ~~~~~vlVtGa----------------tG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (380)
                      +.+++|+||||                ||.+|.+++++|..+|++|+++.+.....                      ..
T Consensus       183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~----------------------~~  240 (390)
T TIGR00521       183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL----------------------TP  240 (390)
T ss_pred             cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC----------------------CC
Confidence            57799999998                36799999999999999999988765321                      00


Q ss_pred             CceEEEEcCCCChhcH-HHHh----cCCCEEEEccccCccccCC--------CCCcchhhHHHHHHHHHHHHHcCCCEEE
Q 016901          142 EMLELVECDLEKRVQI-EPAL----GNASVVICCIGASEKEVFD--------ITGPYRIDFQATKNLVDAATIAKVNHFI  208 (380)
Q Consensus       142 ~~v~~~~~Dl~d~~~~-~~a~----~~~d~Vi~~Ag~~~~~~~~--------~~~~~~~nv~g~~~ll~a~~~~~v~r~V  208 (380)
                      ..+  ...|+++.+++ ++++    .++|++|||||..++....        ....+.+|+.-+..++...++...++ +
T Consensus       241 ~~~--~~~~v~~~~~~~~~~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~~~~~~-~  317 (390)
T TIGR00521       241 PGV--KSIKVSTAEEMLEAALNELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRKIKKHQ-V  317 (390)
T ss_pred             CCc--EEEEeccHHHHHHHHHHhhcccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHHhhCCCc-E
Confidence            222  45788887766 4333    4689999999976543321        11224466677777888777543332 2


Q ss_pred             EEccCCCCCCCCchhhhchhhHHHHHHHHHHHHHHHCCCCEEEEecCcc--cCCCcccccccceeeccCCcccCCCCCHH
Q 016901          209 MVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGM--ERPTDAYKETHNITLSQEDTLFGGQVSNL  286 (380)
Q Consensus       209 ~~SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~g~~~~ivRpg~v--~gp~~~~~~~~~~~~~~~~~~~~~~i~~~  286 (380)
                      .++=..-      ..  .   .   -...+.+-++++++++++...-.-  +|..    ....+.+...........+-.
T Consensus       318 lvgF~aE------t~--~---~---l~~~A~~kl~~k~~D~ivaN~i~~~~fg~~----~n~~~li~~~~~~~~~~~~K~  379 (390)
T TIGR00521       318 IVGFKAE------TN--D---D---LIKYAKEKLKKKNLDMIVANDVSQRGFGSD----ENEVYIFSKHGHKELPLMSKL  379 (390)
T ss_pred             EEEEEcC------CC--c---H---HHHHHHHHHHHcCCCEEEEccCCccccCCC----CcEEEEEECCCeEEeCCCCHH
Confidence            3332111      00  0   0   122234445568999888765321  2221    122223333322222446778


Q ss_pred             HHHHHHHHHH
Q 016901          287 QVAELLACMA  296 (380)
Q Consensus       287 DvA~~i~~~l  296 (380)
                      ++|+.++..+
T Consensus       380 ~iA~~i~~~~  389 (390)
T TIGR00521       380 EVAERILDEI  389 (390)
T ss_pred             HHHHHHHHHh
Confidence            9999988765

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.06  E-value=3.5e-05  Score=63.94  Aligned_cols=76  Identities=25%  Similarity=0.312  Sum_probs=58.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFR-VRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~-V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .++++++|.|| |+.|+.++..|++.|.+ |+++.|+.++++++.+.+..               ..+.++..     ++
T Consensus        10 l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~---------------~~~~~~~~-----~~   68 (135)
T PF01488_consen   10 LKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGG---------------VNIEAIPL-----ED   68 (135)
T ss_dssp             GTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTG---------------CSEEEEEG-----GG
T ss_pred             cCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCc---------------cccceeeH-----HH
Confidence            46789999995 99999999999999975 99999999998888765521               23444432     34


Q ss_pred             HHHHhcCCCEEEEccccC
Q 016901          157 IEPALGNASVVICCIGAS  174 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag~~  174 (380)
                      +.+.+.++|+||++.+..
T Consensus        69 ~~~~~~~~DivI~aT~~~   86 (135)
T PF01488_consen   69 LEEALQEADIVINATPSG   86 (135)
T ss_dssp             HCHHHHTESEEEE-SSTT
T ss_pred             HHHHHhhCCeEEEecCCC
Confidence            557788999999997654

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=98.05  E-value=6.1e-05  Score=68.12  Aligned_cols=75  Identities=25%  Similarity=0.323  Sum_probs=63.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      |+++|.| .|.+|..+++.|.+.|++|+++.++++...+....                 ......+.+|-+|++.++++
T Consensus         1 m~iiIiG-~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~-----------------~~~~~~v~gd~t~~~~L~~a   62 (225)
T COG0569           1 MKIIIIG-AGRVGRSVARELSEEGHNVVLIDRDEERVEEFLAD-----------------ELDTHVVIGDATDEDVLEEA   62 (225)
T ss_pred             CEEEEEC-CcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhh-----------------hcceEEEEecCCCHHHHHhc
Confidence            5688888 89999999999999999999999999887663220                 04578899999999999998


Q ss_pred             -hcCCCEEEEcccc
Q 016901          161 -LGNASVVICCIGA  173 (380)
Q Consensus       161 -~~~~d~Vi~~Ag~  173 (380)
                       +.++|++|-..+.
T Consensus        63 gi~~aD~vva~t~~   76 (225)
T COG0569          63 GIDDADAVVAATGN   76 (225)
T ss_pred             CCCcCCEEEEeeCC
Confidence             7899999987763

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.97  E-value=0.00019  Score=68.21  Aligned_cols=117  Identities=17%  Similarity=0.179  Sum_probs=81.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCCh
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~--~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~  154 (380)
                      .+.+++|.|+|+ |.||..++..|+..|.  ++++++++++++......+.....          ...++.+..+     
T Consensus         3 ~~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~----------~~~~~~i~~~-----   66 (315)
T PRK00066          3 KKQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVP----------FTSPTKIYAG-----   66 (315)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhcc----------ccCCeEEEeC-----
Confidence            345679999997 9999999999999985  799999988877666555543210          0022333322     


Q ss_pred             hcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCE-EEEEc
Q 016901          155 VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNH-FIMVS  211 (380)
Q Consensus       155 ~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r-~V~~S  211 (380)
                       .+ +.++++|+||.+||.......+....+..|..-.+.+++.+.+.+.+- ++.+|
T Consensus        67 -~~-~~~~~adivIitag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~~~~~~vivvs  122 (315)
T PRK00066         67 -DY-SDCKDADLVVITAGAPQKPGETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVAS  122 (315)
T ss_pred             -CH-HHhCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence             23 457899999999997544333444557789998999999998877554 44444

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=97.94  E-value=1.7e-05  Score=71.76  Aligned_cols=67  Identities=12%  Similarity=0.164  Sum_probs=46.8

Q ss_pred             EEE-cCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH--
Q 016901           84 FVA-GATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA--  160 (380)
Q Consensus        84 lVt-GatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a--  160 (380)
                      .|| .++|+||++++++|+++|++|+++.+... ..                       . .....+|+.+.+++.++  
T Consensus        18 ~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~-l~-----------------------~-~~~~~~Dv~d~~s~~~l~~   72 (227)
T TIGR02114        18 SITNHSTGHLGKIITETFLSAGHEVTLVTTKRA-LK-----------------------P-EPHPNLSIREIETTKDLLI   72 (227)
T ss_pred             eecCCcccHHHHHHHHHHHHCCCEEEEEcChhh-cc-----------------------c-ccCCcceeecHHHHHHHHH
Confidence            444 55999999999999999999999876311 00                       0 00134688876655544  


Q ss_pred             -----hcCCCEEEEccccCc
Q 016901          161 -----LGNASVVICCIGASE  175 (380)
Q Consensus       161 -----~~~~d~Vi~~Ag~~~  175 (380)
                           ++++|++|||||...
T Consensus        73 ~v~~~~g~iDiLVnnAgv~d   92 (227)
T TIGR02114        73 TLKELVQEHDILIHSMAVSD   92 (227)
T ss_pred             HHHHHcCCCCEEEECCEecc
Confidence                 357999999999653

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=97.94  E-value=5.1e-05  Score=73.86  Aligned_cols=100  Identities=20%  Similarity=0.342  Sum_probs=67.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~-G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      ++++|.|.||||++|..+++.|+++ +++|..++++.+..+.+..                   ....+..+|+.+.+++
T Consensus        37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~-------------------~~~~l~~~~~~~~~~~   97 (381)
T PLN02968         37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFGS-------------------VFPHLITQDLPNLVAV   97 (381)
T ss_pred             cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCchh-------------------hCccccCccccceecC
Confidence            5579999999999999999999999 5799999886543222111                   1112233455444444


Q ss_pred             HHH-hcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCC
Q 016901          158 EPA-LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT  215 (380)
Q Consensus       158 ~~a-~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~  215 (380)
                      +.. +.++|+||.+.+..                ...+++.++. .| .++|-+|+..-
T Consensus        98 ~~~~~~~~DvVf~Alp~~----------------~s~~i~~~~~-~g-~~VIDlSs~fR  138 (381)
T PLN02968         98 KDADFSDVDAVFCCLPHG----------------TTQEIIKALP-KD-LKIVDLSADFR  138 (381)
T ss_pred             CHHHhcCCCEEEEcCCHH----------------HHHHHHHHHh-CC-CEEEEcCchhc
Confidence            433 68899999987632                4666777763 45 57999998654

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=97.92  E-value=4.5e-05  Score=72.38  Aligned_cols=117  Identities=16%  Similarity=0.185  Sum_probs=73.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCCc--hhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSV--QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~--~V~~l~R~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      |+|.|+||||.+|..++..|+..|+  +|++++|++  +++......+...-.         .......+ .  .  ..+
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~---------~~~~~~~i-~--~--~~d   66 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALA---------AAGIDAEI-K--I--SSD   66 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchh---------ccCCCcEE-E--E--CCC
Confidence            5799999999999999999999986  599999954  333222211111000         00011111 1  1  112


Q ss_pred             HHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCC-EEEEEcc
Q 016901          157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVSS  212 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~-r~V~~SS  212 (380)
                      ++ .+.++|+||-++|.......+....++.|+.-.+.+++.+.+.+.+ .+|.+++
T Consensus        67 ~~-~l~~aDiViitag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~n  122 (309)
T cd05294          67 LS-DVAGSDIVIITAGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTN  122 (309)
T ss_pred             HH-HhCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence            33 4899999999999654332233445677888899998888777644 5565554

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.88  E-value=9.7e-05  Score=70.07  Aligned_cols=114  Identities=17%  Similarity=0.152  Sum_probs=79.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G--~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ++|.|.| +|.+|+.++..|+..|  ++|++++|++++.+.+...+......         ......+..+|      . 
T Consensus         1 ~kI~IIG-aG~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~---------~~~~~~i~~~~------~-   63 (306)
T cd05291           1 RKVVIIG-AGHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAF---------LPSPVKIKAGD------Y-   63 (306)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhc---------cCCCeEEEcCC------H-
Confidence            3699999 5999999999999999  68999999998877766655432100         00122222222      2 


Q ss_pred             HHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCC-EEEEEc
Q 016901          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVS  211 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~-r~V~~S  211 (380)
                      +.+.++|+||+++|.......+....++.|..-.+.+.+.+++.+.+ .++.+|
T Consensus        64 ~~l~~aDIVIitag~~~~~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvs  117 (306)
T cd05291          64 SDCKDADIVVITAGAPQKPGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVAS  117 (306)
T ss_pred             HHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEec
Confidence            34689999999999764433344455778998899999999888755 444444

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=97.86  E-value=0.00039  Score=55.68  Aligned_cols=70  Identities=24%  Similarity=0.328  Sum_probs=58.4

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH-h
Q 016901           83 AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA-L  161 (380)
Q Consensus        83 vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a-~  161 (380)
                      |+|.| .|.+|..+++.|.+.+.+|+++.++++..+.+.+                   .++.++.||.+|++.++++ +
T Consensus         1 vvI~G-~g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~-------------------~~~~~i~gd~~~~~~l~~a~i   60 (116)
T PF02254_consen    1 VVIIG-YGRIGREIAEQLKEGGIDVVVIDRDPERVEELRE-------------------EGVEVIYGDATDPEVLERAGI   60 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHH-------------------TTSEEEES-TTSHHHHHHTTG
T ss_pred             eEEEc-CCHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHh-------------------cccccccccchhhhHHhhcCc
Confidence            57888 5799999999999977799999999988777654                   5688999999999988876 4


Q ss_pred             cCCCEEEEccc
Q 016901          162 GNASVVICCIG  172 (380)
Q Consensus       162 ~~~d~Vi~~Ag  172 (380)
                      .+++.||-+..
T Consensus        61 ~~a~~vv~~~~   71 (116)
T PF02254_consen   61 EKADAVVILTD   71 (116)
T ss_dssp             GCESEEEEESS
T ss_pred             cccCEEEEccC
Confidence            78999998764

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.85  E-value=0.00028  Score=67.72  Aligned_cols=108  Identities=14%  Similarity=0.282  Sum_probs=74.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCc---------------------hhHHHHHHHHHhhhhcccccc
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV---------------------QRAENLVQSVKQMKLDGELAN  135 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~---------------------~~~~~~~~~~~~~~~~~~~~~  135 (380)
                      .+.++|+|.| .|.+|+++++.|++.|. ++++++++.                     .|.+...+.++..+       
T Consensus        22 L~~~~VlIiG-~GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~in-------   93 (338)
T PRK12475         22 IREKHVLIVG-AGALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKIN-------   93 (338)
T ss_pred             hcCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHC-------
Confidence            4667899999 68899999999999997 788888864                     24444444444432       


Q ss_pred             cCCCCCCceEEEEcCCCChhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCC
Q 016901          136 KGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (380)
Q Consensus       136 ~~~~~~~~v~~~~~Dl~d~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~  214 (380)
                          +.-+++.+..|++ .+.++++++++|+||.+..               |...-..+-++|.+.++ .+|+.+..+
T Consensus        94 ----p~v~i~~~~~~~~-~~~~~~~~~~~DlVid~~D---------------~~~~r~~in~~~~~~~i-p~i~~~~~g  151 (338)
T PRK12475         94 ----SEVEIVPVVTDVT-VEELEELVKEVDLIIDATD---------------NFDTRLLINDLSQKYNI-PWIYGGCVG  151 (338)
T ss_pred             ----CCcEEEEEeccCC-HHHHHHHhcCCCEEEEcCC---------------CHHHHHHHHHHHHHcCC-CEEEEEecc
Confidence                1135667777876 4567888999999999863               22223335577788876 467776544

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.80  E-value=0.00038  Score=61.88  Aligned_cols=109  Identities=16%  Similarity=0.221  Sum_probs=73.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCc-------------------hhHHHHHHHHHhhhhcccccccC
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKG  137 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~-------------------~~~~~~~~~~~~~~~~~~~~~~~  137 (380)
                      ....+|+|.| .|.+|+++++.|+..|. ++++++++.                   .|.+.+.+.+++++         
T Consensus        19 l~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~n---------   88 (202)
T TIGR02356        19 LLNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELN---------   88 (202)
T ss_pred             hcCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhC---------
Confidence            4567899999 89999999999999996 888888763                   34444444444432         


Q ss_pred             CCCCCceEEEEcCCCChhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCC
Q 016901          138 IQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT  215 (380)
Q Consensus       138 ~~~~~~v~~~~~Dl~d~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~  215 (380)
                        +.-+++.+..++. .+.+.+.+.++|+||.+..               |...-..+-+.|.+.++ .+|+.+..+.
T Consensus        89 --p~v~i~~~~~~i~-~~~~~~~~~~~D~Vi~~~d---------------~~~~r~~l~~~~~~~~i-p~i~~~~~g~  147 (202)
T TIGR02356        89 --SDIQVTALKERVT-AENLELLINNVDLVLDCTD---------------NFATRYLINDACVALGT-PLISAAVVGF  147 (202)
T ss_pred             --CCCEEEEehhcCC-HHHHHHHHhCCCEEEECCC---------------CHHHHHHHHHHHHHcCC-CEEEEEeccC
Confidence              1123444444554 3557788899999999863               23334456678888875 5777776443

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.80  E-value=0.00023  Score=71.19  Aligned_cols=73  Identities=18%  Similarity=0.112  Sum_probs=62.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      |+|+|.|+ |.+|+++++.|.+.|++|++++++++..+.+.+                  ..++.++.||.++...++++
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~------------------~~~~~~~~gd~~~~~~l~~~   61 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQD------------------RLDVRTVVGNGSSPDVLREA   61 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHh------------------hcCEEEEEeCCCCHHHHHHc
Confidence            57999996 999999999999999999999999887665432                  03588999999999999888


Q ss_pred             -hcCCCEEEEccc
Q 016901          161 -LGNASVVICCIG  172 (380)
Q Consensus       161 -~~~~d~Vi~~Ag  172 (380)
                       +.++|.||-+..
T Consensus        62 ~~~~a~~vi~~~~   74 (453)
T PRK09496         62 GAEDADLLIAVTD   74 (453)
T ss_pred             CCCcCCEEEEecC
Confidence             889999998864

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=97.78  E-value=0.00023  Score=67.85  Aligned_cols=118  Identities=10%  Similarity=0.029  Sum_probs=77.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-------eEEEEeCCc--hhHHHHHHHHHhhhhcccccccCCCCCCceEEEEc
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGF-------RVRAGVRSV--QRAENLVQSVKQMKLDGELANKGIQPVEMLELVEC  149 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~-------~V~~l~R~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  149 (380)
                      +..+|.|+||+|+||+.++..|+..|.       ++++++.++  +++......+......         ...++.+.  
T Consensus         2 ~p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~---------~~~~~~i~--   70 (323)
T TIGR01759         2 KPVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFP---------LLAGVVAT--   70 (323)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhcccc---------ccCCcEEe--
Confidence            346899999999999999999998883       688888854  3343333222211000         00122211  


Q ss_pred             CCCChhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCC-CEEEEEcc
Q 016901          150 DLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKV-NHFIMVSS  212 (380)
Q Consensus       150 Dl~d~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v-~r~V~~SS  212 (380)
                           ....+.++++|+||.+||.......+..+.+..|..-.+.+.+.+.+.+. .-++.+-|
T Consensus        71 -----~~~~~~~~daDvVVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs  129 (323)
T TIGR01759        71 -----TDPEEAFKDVDAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVG  129 (323)
T ss_pred             -----cChHHHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence                 22346788999999999976544444455578899999999999998875 54444443

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.77  E-value=0.00044  Score=66.38  Aligned_cols=108  Identities=17%  Similarity=0.282  Sum_probs=74.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCc---------------------hhHHHHHHHHHhhhhcccccc
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV---------------------QRAENLVQSVKQMKLDGELAN  135 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~---------------------~~~~~~~~~~~~~~~~~~~~~  135 (380)
                      ....+|+|.| .|++|+++++.|++.|. ++++++++.                     .+.....+.+++++       
T Consensus        22 L~~~~VlVvG-~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~in-------   93 (339)
T PRK07688         22 LREKHVLIIG-AGALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEIN-------   93 (339)
T ss_pred             hcCCcEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHC-------
Confidence            3567899999 59999999999999997 888888863                     23333333343332       


Q ss_pred             cCCCCCCceEEEEcCCCChhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCC
Q 016901          136 KGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (380)
Q Consensus       136 ~~~~~~~~v~~~~~Dl~d~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~  214 (380)
                          +.-+++.+..++++ +.+.++++++|+||.+..               |...-..+-++|.+.++ .+|+.+..+
T Consensus        94 ----p~v~v~~~~~~~~~-~~~~~~~~~~DlVid~~D---------------n~~~r~~ln~~~~~~~i-P~i~~~~~g  151 (339)
T PRK07688         94 ----SDVRVEAIVQDVTA-EELEELVTGVDLIIDATD---------------NFETRFIVNDAAQKYGI-PWIYGACVG  151 (339)
T ss_pred             ----CCcEEEEEeccCCH-HHHHHHHcCCCEEEEcCC---------------CHHHHHHHHHHHHHhCC-CEEEEeeee
Confidence                11346666777754 557778899999999853               33334456678888885 477777654

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.77  E-value=0.00026  Score=70.79  Aligned_cols=76  Identities=20%  Similarity=0.208  Sum_probs=56.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCc-hhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV-QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      +++++|+|+|+++ +|..+++.|+++|++|++.+++. +...+..+.+..               .++.++.+|..+   
T Consensus         3 ~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~---------------~~~~~~~~~~~~---   63 (450)
T PRK14106          3 LKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGE---------------LGIELVLGEYPE---   63 (450)
T ss_pred             cCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHh---------------cCCEEEeCCcch---
Confidence            3578999999777 99999999999999999999875 233222222221               246778888775   


Q ss_pred             HHHHhcCCCEEEEccccC
Q 016901          157 IEPALGNASVVICCIGAS  174 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag~~  174 (380)
                        +..+++|+||+++|..
T Consensus        64 --~~~~~~d~vv~~~g~~   79 (450)
T PRK14106         64 --EFLEGVDLVVVSPGVP   79 (450)
T ss_pred             --hHhhcCCEEEECCCCC
Confidence              3457899999999854

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=97.76  E-value=0.00017  Score=78.00  Aligned_cols=77  Identities=21%  Similarity=0.264  Sum_probs=62.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC-Ce-------------EEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCce
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLG-FR-------------VRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML  144 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G-~~-------------V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  144 (380)
                      .+++|+|.|| |++|+.+++.|++.+ ++             |.+.+++.+.++++.+..                 +++
T Consensus       568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~-----------------~~~  629 (1042)
T PLN02819        568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGI-----------------ENA  629 (1042)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhc-----------------CCC
Confidence            4679999995 999999999998763 34             777788887766654311                 467


Q ss_pred             EEEEcCCCChhcHHHHhcCCCEEEEcccc
Q 016901          145 ELVECDLEKRVQIEPALGNASVVICCIGA  173 (380)
Q Consensus       145 ~~~~~Dl~d~~~~~~a~~~~d~Vi~~Ag~  173 (380)
                      +.++.|++|.+++.++++++|+||++...
T Consensus       630 ~~v~lDv~D~e~L~~~v~~~DaVIsalP~  658 (1042)
T PLN02819        630 EAVQLDVSDSESLLKYVSQVDVVISLLPA  658 (1042)
T ss_pred             ceEEeecCCHHHHHHhhcCCCEEEECCCc
Confidence            78999999999999999999999999864

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=97.75  E-value=0.0001  Score=70.69  Aligned_cols=93  Identities=25%  Similarity=0.238  Sum_probs=60.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC---eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGF---RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~---~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      +++|+|.||||++|+.|++.|.++||   +++.++++.+..+.+.                   ..+..+...|+.+   
T Consensus         1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~-------------------~~g~~i~v~d~~~---   58 (334)
T PRK14874          1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELS-------------------FKGKELKVEDLTT---   58 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeee-------------------eCCceeEEeeCCH---
Confidence            36899999999999999999999876   4577877654322210                   0123344445543   


Q ss_pred             HHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccC
Q 016901          157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL  213 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~  213 (380)
                        ..+.++|+||.++|..                .+..++....+.|+ .+|=.|+.
T Consensus        59 --~~~~~vDvVf~A~g~g----------------~s~~~~~~~~~~G~-~VIDlS~~   96 (334)
T PRK14874         59 --FDFSGVDIALFSAGGS----------------VSKKYAPKAAAAGA-VVIDNSSA   96 (334)
T ss_pred             --HHHcCCCEEEECCChH----------------HHHHHHHHHHhCCC-EEEECCch
Confidence              2346899999998642                24455566656675 45555653

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=97.74  E-value=0.0019  Score=63.81  Aligned_cols=117  Identities=15%  Similarity=0.049  Sum_probs=82.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHC-------CC--eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEc
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKL-------GF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVEC  149 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~-------G~--~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  149 (380)
                      +.-+|.|+|++|.||.+++-.|+..       |.  +++++++++++++...-.+......         ...++.+..+
T Consensus        99 ~~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~---------~~~~v~i~~~  169 (444)
T PLN00112         99 KLINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYP---------LLREVSIGID  169 (444)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhh---------hcCceEEecC
Confidence            4568999999999999999999988       64  7889999998877666555432111         0022222221


Q ss_pred             CCCChhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHH-cCCC-EEEEEc
Q 016901          150 DLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATI-AKVN-HFIMVS  211 (380)
Q Consensus       150 Dl~d~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~-~~v~-r~V~~S  211 (380)
                      |       -+.++++|+||-+||.......+..+.++.|+.-.+.+.+.+.+ .+.. .+|.+|
T Consensus       170 ~-------ye~~kdaDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVs  226 (444)
T PLN00112        170 P-------YEVFQDAEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNEVASRNVKVIVVG  226 (444)
T ss_pred             C-------HHHhCcCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcC
Confidence            1       46678999999999976444344455578899999999999988 5654 444444

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=97.74  E-value=0.00019  Score=66.48  Aligned_cols=114  Identities=17%  Similarity=0.114  Sum_probs=78.2

Q ss_pred             EEEEcCCChHHHHHHHHHHHCC----CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           83 AFVAGATGKVGSRTVRELLKLG----FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        83 vlVtGatG~iG~~lv~~Ll~~G----~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      |.|.||+|.+|..++..|+..|    .+|++++++++++......++.+...         . ...     .+.-..++.
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~---------~-~~~-----~i~~~~d~~   65 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEP---------L-ADI-----KVSITDDPY   65 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhh---------c-cCc-----EEEECCchH
Confidence            5799999999999999999998    78999999887777666655443210         0 011     111123456


Q ss_pred             HHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCE-EEEEc
Q 016901          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNH-FIMVS  211 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r-~V~~S  211 (380)
                      ++++++|+||.++|..............-|+.-.+.+++.+++...+- ++.+|
T Consensus        66 ~~~~~aDiVv~t~~~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~~i~~t  119 (263)
T cd00650          66 EAFKDADVVIITAGVGRKPGMGRLDLLKRNVPIVKEIGDNIEKYSPDAWIIVVS  119 (263)
T ss_pred             HHhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            788999999999986544332323345668888888888888877553 44443

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PRK04148 hypothetical protein; Provisional

Probab=97.73  E-value=0.00061  Score=55.92  Aligned_cols=92  Identities=16%  Similarity=0.072  Sum_probs=71.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      +++++++.| +| .|..++..|.+.|++|++++.++...+...+                   ..+.++.+|+.+++  .
T Consensus        16 ~~~kileIG-~G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~-------------------~~~~~v~dDlf~p~--~   72 (134)
T PRK04148         16 KNKKIVELG-IG-FYFKVAKKLKESGFDVIVIDINEKAVEKAKK-------------------LGLNAFVDDLFNPN--L   72 (134)
T ss_pred             cCCEEEEEE-ec-CCHHHHHHHHHCCCEEEEEECCHHHHHHHHH-------------------hCCeEEECcCCCCC--H
Confidence            457899999 67 8889999999999999999999987665543                   46789999999887  4


Q ss_pred             HHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEE
Q 016901          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFI  208 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V  208 (380)
                      +.-+++|.|+-+=-.               .+-...+++.+++.++.-+|
T Consensus        73 ~~y~~a~liysirpp---------------~el~~~~~~la~~~~~~~~i  107 (134)
T PRK04148         73 EIYKNAKLIYSIRPP---------------RDLQPFILELAKKINVPLII  107 (134)
T ss_pred             HHHhcCCEEEEeCCC---------------HHHHHHHHHHHHHcCCCEEE
Confidence            566889999876321               12356788999998876444

>PRK05442 malate dehydrogenase; Provisional

Probab=97.71  E-value=0.00029  Score=67.16  Aligned_cols=117  Identities=10%  Similarity=0.036  Sum_probs=76.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-------eEEEEeCCch--hHHHHHHHHHhhhhcccccccCCCCCCceEEEEc
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGF-------RVRAGVRSVQ--RAENLVQSVKQMKLDGELANKGIQPVEMLELVEC  149 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~-------~V~~l~R~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  149 (380)
                      ++++|.|+||+|.+|+.++..|+..|.       ++++++.++.  ++......+......         ...++.+.  
T Consensus         3 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~---------~~~~~~i~--   71 (326)
T PRK05442          3 APVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFP---------LLAGVVIT--   71 (326)
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhh---------hcCCcEEe--
Confidence            567899999999999999999988762       6888887543  233222222111000         00122221  


Q ss_pred             CCCChhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcC-CC-EEEEEc
Q 016901          150 DLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK-VN-HFIMVS  211 (380)
Q Consensus       150 Dl~d~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~-v~-r~V~~S  211 (380)
                           ....+.++++|+||-+||.......+..+.+..|..-.+.+.+.+.++. .. .++.+|
T Consensus        72 -----~~~y~~~~daDiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs  130 (326)
T PRK05442         72 -----DDPNVAFKDADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVG  130 (326)
T ss_pred             -----cChHHHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence                 1234678899999999997654444455557889999999999998844 33 555555

>PTZ00117 malate dehydrogenase; Provisional

Probab=97.67  E-value=0.00031  Score=67.00  Aligned_cols=118  Identities=16%  Similarity=0.121  Sum_probs=76.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +.++|.|.|| |.+|..++..|+..| .+|++++++++......-.+....        . .......+ .+    ..++
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~--------~-~~~~~~~i-~~----~~d~   68 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFS--------T-LVGSNINI-LG----TNNY   68 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhc--------c-ccCCCeEE-Ee----CCCH
Confidence            4568999996 999999999999988 689999998766443221111100        0 00011121 11    1234


Q ss_pred             HHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCE-EEEEcc
Q 016901          158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNH-FIMVSS  212 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r-~V~~SS  212 (380)
                      + ++.++|+||.++|.......+....+..|..-.+.+++.+.+...+. ++++|.
T Consensus        69 ~-~l~~ADiVVitag~~~~~g~~r~dll~~n~~i~~~i~~~i~~~~p~a~vivvsN  123 (319)
T PTZ00117         69 E-DIKDSDVVVITAGVQRKEEMTREDLLTINGKIMKSVAESVKKYCPNAFVICVTN  123 (319)
T ss_pred             H-HhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            5 77999999999986544333334446678877888888888887665 566554

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=97.64  E-value=0.00044  Score=65.40  Aligned_cols=114  Identities=16%  Similarity=0.099  Sum_probs=75.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G--~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      |+|.|+|++|.||+.++..|+..|  .++++++.+  +++...-.+..          ..   ....+...  ...+++.
T Consensus         1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~----------~~---~~~~i~~~--~~~~~~y   63 (310)
T cd01337           1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSH----------IN---TPAKVTGY--LGPEELK   63 (310)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHh----------CC---CcceEEEe--cCCCchH
Confidence            479999999999999999999888  478888877  32221111111          00   11111111  0123356


Q ss_pred             HHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEc
Q 016901          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVS  211 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~S  211 (380)
                      +.++++|+||-+||.......+..+.++.|..-.+.+++...+.+.+-++.+-
T Consensus        64 ~~~~daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~p~a~vivv  116 (310)
T cd01337          64 KALKGADVVVIPAGVPRKPGMTRDDLFNINAGIVRDLATAVAKACPKALILII  116 (310)
T ss_pred             HhcCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEc
Confidence            78899999999999764443344555788999999999999888765444333

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=97.64  E-value=0.0015  Score=54.02  Aligned_cols=106  Identities=20%  Similarity=0.320  Sum_probs=74.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCc-------------------hhHHHHHHHHHhhhhcccccccCCC
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKGIQ  139 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~  139 (380)
                      .++|+|.| .|.+|+.+++.|+..|. ++++++.+.                   .|.+.+.+.+.+++.          
T Consensus         2 ~~~v~iiG-~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np----------   70 (135)
T PF00899_consen    2 NKRVLIIG-AGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINP----------   70 (135)
T ss_dssp             T-EEEEES-TSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHST----------
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcC----------
Confidence            35899999 89999999999999996 688877632                   245555555554431          


Q ss_pred             CCCceEEEEcCCCChhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCC
Q 016901          140 PVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (380)
Q Consensus       140 ~~~~v~~~~~Dl~d~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~  214 (380)
                       .-+++.+..++ +.+.+.+.++++|+||.|..               |...-..+-+.|++.+. .+|+.+..+
T Consensus        71 -~~~v~~~~~~~-~~~~~~~~~~~~d~vi~~~d---------------~~~~~~~l~~~~~~~~~-p~i~~~~~g  127 (135)
T PF00899_consen   71 -DVEVEAIPEKI-DEENIEELLKDYDIVIDCVD---------------SLAARLLLNEICREYGI-PFIDAGVNG  127 (135)
T ss_dssp             -TSEEEEEESHC-SHHHHHHHHHTSSEEEEESS---------------SHHHHHHHHHHHHHTT--EEEEEEEET
T ss_pred             -ceeeeeeeccc-ccccccccccCCCEEEEecC---------------CHHHHHHHHHHHHHcCC-CEEEEEeec
Confidence             14566677777 34567788899999999864               23344557778888876 677777654

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.63  E-value=0.00017  Score=62.99  Aligned_cols=70  Identities=14%  Similarity=0.172  Sum_probs=42.8

Q ss_pred             cCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCC--hhcHHHHhcCC
Q 016901           87 GATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK--RVQIEPALGNA  164 (380)
Q Consensus        87 GatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d--~~~~~~a~~~~  164 (380)
                      -+||..|.+|+++++.+|++|+++....+ ...                     ..+++.+...-.+  .+.+.+.+...
T Consensus        26 ~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~~---------------------p~~~~~i~v~sa~em~~~~~~~~~~~   83 (185)
T PF04127_consen   26 RSSGKMGAALAEEAARRGAEVTLIHGPSS-LPP---------------------PPGVKVIRVESAEEMLEAVKELLPSA   83 (185)
T ss_dssp             S--SHHHHHHHHHHHHTT-EEEEEE-TTS--------------------------TTEEEEE-SSHHHHHHHHHHHGGGG
T ss_pred             CCcCHHHHHHHHHHHHCCCEEEEEecCcc-ccc---------------------cccceEEEecchhhhhhhhccccCcc
Confidence            45899999999999999999999987632 111                     1467666644322  13445556778


Q ss_pred             CEEEEccccCcccc
Q 016901          165 SVVICCIGASEKEV  178 (380)
Q Consensus       165 d~Vi~~Ag~~~~~~  178 (380)
                      |++||+|+..++..
T Consensus        84 Di~I~aAAVsDf~p   97 (185)
T PF04127_consen   84 DIIIMAAAVSDFRP   97 (185)
T ss_dssp             SEEEE-SB--SEEE
T ss_pred             eeEEEecchhheee
Confidence            99999999765443

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=97.61  E-value=0.00052  Score=65.43  Aligned_cols=119  Identities=8%  Similarity=0.060  Sum_probs=75.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHH-HHHHhhhhcccccccCCCCCCceEEEEcCCCCh
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLV-QSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~  154 (380)
                      +.+.++|.|.| +|.+|..++..++..|. +|++++.+++...... +..+...+.          ....++...     
T Consensus         3 ~~~~~KI~IIG-aG~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~----------~~~~~I~~~-----   66 (321)
T PTZ00082          3 MIKRRKISLIG-SGNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIA----------GSNSKVIGT-----   66 (321)
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhcc----------CCCeEEEEC-----
Confidence            44567999999 69999999999999994 8999999887643211 111110000          012223210     


Q ss_pred             hcHHHHhcCCCEEEEccccCccccC-----CCCCcchhhHHHHHHHHHHHHHcCCC-EEEEEcc
Q 016901          155 VQIEPALGNASVVICCIGASEKEVF-----DITGPYRIDFQATKNLVDAATIAKVN-HFIMVSS  212 (380)
Q Consensus       155 ~~~~~a~~~~d~Vi~~Ag~~~~~~~-----~~~~~~~~nv~g~~~ll~a~~~~~v~-r~V~~SS  212 (380)
                      .++ ++++++|+||.++|.......     +..+.+..|+.-.+.+++.+.+.+.+ .++.+|.
T Consensus        67 ~d~-~~l~~aDiVI~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a~~iv~sN  129 (321)
T PTZ00082         67 NNY-EDIAGSDVVIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNAFVIVITN  129 (321)
T ss_pred             CCH-HHhCCCCEEEECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            123 467899999999986543222     22223556887788888888887766 5666664

>PRK06223 malate dehydrogenase; Reviewed

Probab=97.59  E-value=0.00057  Score=64.85  Aligned_cols=116  Identities=13%  Similarity=0.072  Sum_probs=72.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      +++|.|.|| |.+|..++..|+..|. +|++++++++........+......         ......+. .    ..++ 
T Consensus         2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~---------~~~~~~i~-~----~~d~-   65 (307)
T PRK06223          2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPV---------EGFDTKIT-G----TNDY-   65 (307)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhh---------cCCCcEEE-e----CCCH-
Confidence            368999997 9999999999999875 9999999887654433222211100         00111111 1    1223 


Q ss_pred             HHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCE-EEEEc
Q 016901          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNH-FIMVS  211 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r-~V~~S  211 (380)
                      +.+.++|+||.++|.......+..+...-|+.-.+.+++.+.+...+. +|.++
T Consensus        66 ~~~~~aDiVii~~~~p~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv~t  119 (307)
T PRK06223         66 EDIAGSDVVVITAGVPRKPGMSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVVT  119 (307)
T ss_pred             HHHCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            357899999999986533222222234567777788888887766554 55554

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=97.57  E-value=0.0015  Score=58.42  Aligned_cols=113  Identities=24%  Similarity=0.276  Sum_probs=76.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCc-------------------hhHHHHHHHHHhhhhcccccccC
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKG  137 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~-------------------~~~~~~~~~~~~~~~~~~~~~~~  137 (380)
                      .+..+|+|.| -|++|++.++.|++.|. ++++++-+.                   ++.+-+.+.++..+         
T Consensus        28 l~~~~V~VvG-iGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~In---------   97 (263)
T COG1179          28 LKQAHVCVVG-IGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQIN---------   97 (263)
T ss_pred             HhhCcEEEEe-cCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhC---------
Confidence            4567899999 89999999999999995 566655432                   23444444444332         


Q ss_pred             CCCCCceEEEEc-CCCChhcHHHHhc-CCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCC
Q 016901          138 IQPVEMLELVEC-DLEKRVQIEPALG-NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT  215 (380)
Q Consensus       138 ~~~~~~v~~~~~-Dl~d~~~~~~a~~-~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~  215 (380)
                          +..++... |+-.++.+++.+. +.|+||.+.=               |+..=..|+..|.+++.   -++||+|+
T Consensus        98 ----P~c~V~~~~~f~t~en~~~~~~~~~DyvIDaiD---------------~v~~Kv~Li~~c~~~ki---~vIss~Ga  155 (263)
T COG1179          98 ----PECEVTAINDFITEENLEDLLSKGFDYVIDAID---------------SVRAKVALIAYCRRNKI---PVISSMGA  155 (263)
T ss_pred             ----CCceEeehHhhhCHhHHHHHhcCCCCEEEEchh---------------hhHHHHHHHHHHHHcCC---CEEeeccc
Confidence                44444333 4456777888775 5999999852               45666778999998875   36788777


Q ss_pred             CCCCCch
Q 016901          216 NKFGFPA  222 (380)
Q Consensus       216 ~~~~~~~  222 (380)
                      ....+|.
T Consensus       156 g~k~DPT  162 (263)
T COG1179         156 GGKLDPT  162 (263)
T ss_pred             cCCCCCc
Confidence            5554554

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.57  E-value=0.001  Score=66.55  Aligned_cols=101  Identities=18%  Similarity=0.207  Sum_probs=74.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      .+++|+|.|+ |.+|+.+++.|.+.|++|++++++++..+.+.+..                 .++.++.||.++.+.++
T Consensus       230 ~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~-----------------~~~~~i~gd~~~~~~L~  291 (453)
T PRK09496        230 PVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEEL-----------------PNTLVLHGDGTDQELLE  291 (453)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHC-----------------CCCeEEECCCCCHHHHH
Confidence            4688999995 99999999999999999999999998766654311                 35788999999998886


Q ss_pred             HH-hcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEcc
Q 016901          159 PA-LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (380)
Q Consensus       159 ~a-~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS  212 (380)
                      ++ +.++|+||-+....           ..|+.    +...+++.+.++++....
T Consensus       292 ~~~~~~a~~vi~~~~~~-----------~~n~~----~~~~~~~~~~~~ii~~~~  331 (453)
T PRK09496        292 EEGIDEADAFIALTNDD-----------EANIL----SSLLAKRLGAKKVIALVN  331 (453)
T ss_pred             hcCCccCCEEEECCCCc-----------HHHHH----HHHHHHHhCCCeEEEEEC
Confidence            54 47899998765421           33544    233455566666665443

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=97.56  E-value=0.00045  Score=65.58  Aligned_cols=89  Identities=15%  Similarity=0.076  Sum_probs=53.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      ++|.|+| .|.+|..++..|+++|++|++.+|+++..+.....+... +.... ..+.............+.-..++.++
T Consensus         3 ~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~~~~~~~~~~~~~-l~~l~-~~g~~~~~~~~~~~~~i~~~~~~~~a   79 (308)
T PRK06129          3 GSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPAAAAAAPAYIAGR-LEDLA-AFDLLDGEAPDAVLARIRVTDSLADA   79 (308)
T ss_pred             cEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHHHHHHHHHHHHHH-HHHHH-HcCCCchhhHHHHhcCeEEECcHHHh
Confidence            4799999 999999999999999999999999987666544332210 00000 00000000000000111112356677


Q ss_pred             hcCCCEEEEccc
Q 016901          161 LGNASVVICCIG  172 (380)
Q Consensus       161 ~~~~d~Vi~~Ag  172 (380)
                      ++++|.||.+..
T Consensus        80 ~~~ad~Vi~avp   91 (308)
T PRK06129         80 VADADYVQESAP   91 (308)
T ss_pred             hCCCCEEEECCc
Confidence            889999999873

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=97.54  E-value=0.0017  Score=55.61  Aligned_cols=66  Identities=32%  Similarity=0.347  Sum_probs=51.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      |++|.+.| .|-+|+.+++.|+++|++|++.+|++++.+++.+                   .+++.       .++..+
T Consensus         1 m~~Ig~IG-lG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~-------------------~g~~~-------~~s~~e   53 (163)
T PF03446_consen    1 MMKIGFIG-LGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAE-------------------AGAEV-------ADSPAE   53 (163)
T ss_dssp             -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHH-------------------TTEEE-------ESSHHH
T ss_pred             CCEEEEEc-hHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHH-------------------hhhhh-------hhhhhh
Confidence            46899999 7999999999999999999999999988887764                   23222       355678


Q ss_pred             HhcCCCEEEEccc
Q 016901          160 ALGNASVVICCIG  172 (380)
Q Consensus       160 a~~~~d~Vi~~Ag  172 (380)
                      +++.+|+||-|..
T Consensus        54 ~~~~~dvvi~~v~   66 (163)
T PF03446_consen   54 AAEQADVVILCVP   66 (163)
T ss_dssp             HHHHBSEEEE-SS
T ss_pred             HhhcccceEeecc
Confidence            8888899999864

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=97.52  E-value=0.00082  Score=63.69  Aligned_cols=114  Identities=18%  Similarity=0.143  Sum_probs=74.5

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           82 LAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        82 ~vlVtGatG~iG~~lv~~Ll~~G~--~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      +|.|+|++|.||.+++..|+..|.  +++++++++..  ...-.+..          .   .....+....  +.+++.+
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~--g~a~DL~~----------~---~~~~~i~~~~--~~~~~~~   63 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAA--GVAADLSH----------I---PTAASVKGFS--GEEGLEN   63 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCc--EEEchhhc----------C---CcCceEEEec--CCCchHH
Confidence            489999999999999999998874  78888887621  11000000          0   0111221101  1123567


Q ss_pred             HhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEcc
Q 016901          160 ALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (380)
Q Consensus       160 a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS  212 (380)
                      .++++|+||.+||.......+..+.+..|+.-.+.+.+.+.+.+.+-++.+-|
T Consensus        64 ~~~daDivvitaG~~~~~g~~R~dll~~N~~I~~~i~~~i~~~~p~~iiivvs  116 (312)
T TIGR01772        64 ALKGADVVVIPAGVPRKPGMTRDDLFNVNAGIVKDLVAAVAESCPKAMILVIT  116 (312)
T ss_pred             HcCCCCEEEEeCCCCCCCCccHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEec
Confidence            89999999999997654444455567889999999999998887664444443

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=97.51  E-value=0.0016  Score=59.02  Aligned_cols=108  Identities=19%  Similarity=0.275  Sum_probs=72.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCc-------------------hhHHHHHHHHHhhhhcccccccC
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKG  137 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~-------------------~~~~~~~~~~~~~~~~~~~~~~~  137 (380)
                      ....+|+|.| .|.+|+++++.|+..|. ++++++.+.                   .|.+.+.+.+++++         
T Consensus        19 L~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~n---------   88 (228)
T cd00757          19 LKNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAIN---------   88 (228)
T ss_pred             HhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhC---------
Confidence            3567899999 89999999999999995 666665432                   24444455444432         


Q ss_pred             CCCCCceEEEEcCCCChhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCC
Q 016901          138 IQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (380)
Q Consensus       138 ~~~~~~v~~~~~Dl~d~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~  214 (380)
                        +.-+++.+..+++ .+.+.+.+.++|+||.|...               ...-..+-++|.+.++ .+|+.+..+
T Consensus        89 --p~~~i~~~~~~i~-~~~~~~~~~~~DvVi~~~d~---------------~~~r~~l~~~~~~~~i-p~i~~g~~g  146 (228)
T cd00757          89 --PDVEIEAYNERLD-AENAEELIAGYDLVLDCTDN---------------FATRYLINDACVKLGK-PLVSGAVLG  146 (228)
T ss_pred             --CCCEEEEecceeC-HHHHHHHHhCCCEEEEcCCC---------------HHHHHHHHHHHHHcCC-CEEEEEecc
Confidence              1134555655663 45677888999999998642               2233456678888875 577776543

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.45  E-value=0.00073  Score=63.19  Aligned_cols=75  Identities=27%  Similarity=0.403  Sum_probs=55.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ..+++++|+|+ |++|+.++..|+..| .+|+++.|+.++.+.+.+.+...              ..+.+   ++    +
T Consensus       121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~--------------~~~~~---~~----~  178 (278)
T PRK00258        121 LKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGAL--------------GKAEL---DL----E  178 (278)
T ss_pred             CCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhc--------------cceee---cc----c
Confidence            35689999995 999999999999999 79999999998887776543211              11121   11    2


Q ss_pred             HHHHhcCCCEEEEccccC
Q 016901          157 IEPALGNASVVICCIGAS  174 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag~~  174 (380)
                      ..+.+.++|+||++....
T Consensus       179 ~~~~~~~~DivInaTp~g  196 (278)
T PRK00258        179 LQEELADFDLIINATSAG  196 (278)
T ss_pred             chhccccCCEEEECCcCC
Confidence            345667899999998643

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=97.44  E-value=0.0025  Score=57.70  Aligned_cols=108  Identities=22%  Similarity=0.277  Sum_probs=69.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCc-------------------hhHHHHHHHHHhhhhcccccccC
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKG  137 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~-------------------~~~~~~~~~~~~~~~~~~~~~~~  137 (380)
                      ....+|+|.| .|++|+++++.|++.|. ++++++.+.                   .|.+.+.+.+..++         
T Consensus         9 L~~~~VlVvG-~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~in---------   78 (231)
T cd00755           9 LRNAHVAVVG-LGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDIN---------   78 (231)
T ss_pred             HhCCCEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHC---------
Confidence            3567899999 89999999999999995 777776543                   23344444444432         


Q ss_pred             CCCCCceEEEEcCCCChhcHHHHh-cCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCC
Q 016901          138 IQPVEMLELVECDLEKRVQIEPAL-GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (380)
Q Consensus       138 ~~~~~~v~~~~~Dl~d~~~~~~a~-~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~  214 (380)
                        +.-+++.+...++ ++.+.+.+ .++|+||.+..               |+..-..+.+.|.+.+++ ||...+.+
T Consensus        79 --P~~~V~~~~~~i~-~~~~~~l~~~~~D~VvdaiD---------------~~~~k~~L~~~c~~~~ip-~I~s~g~g  137 (231)
T cd00755          79 --PECEVDAVEEFLT-PDNSEDLLGGDPDFVVDAID---------------SIRAKVALIAYCRKRKIP-VISSMGAG  137 (231)
T ss_pred             --CCcEEEEeeeecC-HhHHHHHhcCCCCEEEEcCC---------------CHHHHHHHHHHHHHhCCC-EEEEeCCc
Confidence              1134555555554 34556666 46999999863               234456688889888753 54444433

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=97.44  E-value=0.011  Score=59.61  Aligned_cols=219  Identities=15%  Similarity=0.066  Sum_probs=122.6

Q ss_pred             CCCeEEEEcCC-ChHHHHHHHHHHHCCCeEEEEeCCch--hHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh
Q 016901           79 DDNLAFVAGAT-GKVGSRTVRELLKLGFRVRAGVRSVQ--RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (380)
Q Consensus        79 ~~~~vlVtGat-G~iG~~lv~~Ll~~G~~V~~l~R~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~  155 (380)
                      ..+.++||||+ |-||..++..|++-|.+|++.+.+-+  ..+-.+....+.+          .+...+-++..++....
T Consensus       395 ~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a----------~~ga~LwvVpaN~~Sys  464 (866)
T COG4982         395 GDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHA----------RYGAALWVVPANMGSYS  464 (866)
T ss_pred             ccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhC----------CCCceEEEEeccccchh
Confidence            45789999986 78999999999999999999876543  3333333222221          22256778888888777


Q ss_pred             cHHHHhc---------------------CCCEEEEccccCcccc-CC----CCCcchhhHHHHHHHHHHHHHcC----CC
Q 016901          156 QIEPALG---------------------NASVVICCIGASEKEV-FD----ITGPYRIDFQATKNLVDAATIAK----VN  205 (380)
Q Consensus       156 ~~~~a~~---------------------~~d~Vi~~Ag~~~~~~-~~----~~~~~~~nv~g~~~ll~a~~~~~----v~  205 (380)
                      +++.++.                     ..|.+|-+|++..... .+    .+..+++-+...++++-..+..+    +.
T Consensus       465 DVdAlIewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsraE~~~rilLw~V~Rliggl~~~~s~r~v~  544 (866)
T COG4982         465 DVDALIEWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRAEFAMRILLWNVLRLIGGLKKQGSSRGVD  544 (866)
T ss_pred             hHHHHHHHhccccccccCCcceecccccCcceeeecccCCccCccccCCchHHHHHHHHHHHHHHHHHHhhhhccccCcc
Confidence            7776651                     1467777776543221 11    11124555555666666555443    22


Q ss_pred             ---EEEEEccCCCCCCCCchhhhchhhHHHHHHHHHHHHHHH----C----CCCEEEEecCcccCCCcccccccceeecc
Q 016901          206 ---HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA----S----GLPYTIVRPGGMERPTDAYKETHNITLSQ  274 (380)
Q Consensus       206 ---r~V~~SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~----~----g~~~~ivRpg~v~gp~~~~~~~~~~~~~~  274 (380)
                         |+|.-.|-.-..+       .....|+.+|...|.++..    +    .+.++--++||+-|-+-..  ...+....
T Consensus       545 ~R~hVVLPgSPNrG~F-------GgDGaYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGWtrGTGLMg--~Ndiiv~a  615 (866)
T COG4982         545 TRLHVVLPGSPNRGMF-------GGDGAYGESKLALDAVVNRWHSESSWAARVSLAHALIGWTRGTGLMG--HNDIIVAA  615 (866)
T ss_pred             cceEEEecCCCCCCcc-------CCCcchhhHHHHHHHHHHHhhccchhhHHHHHhhhheeeeccccccC--CcchhHHH
Confidence               5666555322111       2223599999999988752    2    2444555667765543211  11111111


Q ss_pred             CCcccCCCCCHHHHHHHHHHHHhCCC----CccCcEEEEecCCCCC
Q 016901          275 EDTLFGGQVSNLQVAELLACMAKNRS----LSYCKVVEVIAETTAP  316 (380)
Q Consensus       275 ~~~~~~~~i~~~DvA~~i~~~l~~~~----~~~~~~~ni~~~~~~s  316 (380)
                      -...--...+.+.+|..++-++...-    ....-.+++.+|-...
T Consensus       616 iEk~GV~tyS~~EmA~~LLgL~saev~e~a~~~PI~aDLtGGL~~~  661 (866)
T COG4982         616 IEKAGVRTYSTDEMAFNLLGLASAEVVELAASSPITADLTGGLGEV  661 (866)
T ss_pred             HHHhCceecCHHHHHHHHHhhccHHHHHHHhcCCeEeeccCccccc
Confidence            11110123566778877776665321    1223456777765543

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=97.43  E-value=0.0034  Score=59.42  Aligned_cols=115  Identities=16%  Similarity=0.133  Sum_probs=78.3

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           82 LAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        82 ~vlVtGatG~iG~~lv~~Ll~~G~--~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      +|.|.|+ |.||..++..|+.+|.  ++++++.+++++......+....-        .....++.+..+|       -+
T Consensus         1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~--------~~~~~~~~i~~~~-------y~   64 (307)
T cd05290           1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATA--------LTYSTNTKIRAGD-------YD   64 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhc--------cCCCCCEEEEECC-------HH
Confidence            4789997 9999999999999883  799999888766554443332110        0000234444333       35


Q ss_pred             HhcCCCEEEEccccCccccCC--CCCcchhhHHHHHHHHHHHHHcCCCEEEEEcc
Q 016901          160 ALGNASVVICCIGASEKEVFD--ITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (380)
Q Consensus       160 a~~~~d~Vi~~Ag~~~~~~~~--~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS  212 (380)
                      .++++|+||-+||.......+  ..+.+..|..-.+.+.+.+.+.+..-++.+-|
T Consensus        65 ~~~~aDivvitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~~p~~i~ivvs  119 (307)
T cd05290          65 DCADADIIVITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKVTKEAVIILIT  119 (307)
T ss_pred             HhCCCCEEEECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEec
Confidence            678999999999975432222  24557889999999999999888665555544

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=97.42  E-value=0.0012  Score=62.57  Aligned_cols=114  Identities=17%  Similarity=0.121  Sum_probs=76.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G--~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ++|.|+|+ |.||..++..|+..|  .++++++.+++++......+....          .......+...     .+++
T Consensus         4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~----------~~~~~~~v~~~-----~dy~   67 (312)
T cd05293           4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGS----------AFLKNPKIEAD-----KDYS   67 (312)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhh----------ccCCCCEEEEC-----CCHH
Confidence            58999995 999999999999887  478999988876655544443321          00011122221     1233


Q ss_pred             HHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCC-EEEEEc
Q 016901          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVS  211 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~-r~V~~S  211 (380)
                       .++++|+||.+||.......+....++.|..-.+.+.+.+.+.+.+ .++.+|
T Consensus        68 -~~~~adivvitaG~~~k~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvs  120 (312)
T cd05293          68 -VTANSKVVIVTAGARQNEGESRLDLVQRNVDIFKGIIPKLVKYSPNAILLVVS  120 (312)
T ss_pred             -HhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEcc
Confidence             3789999999999764433333444678888888899999888755 444444

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=97.42  E-value=0.00061  Score=65.65  Aligned_cols=99  Identities=21%  Similarity=0.124  Sum_probs=61.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEE-EcCCCChhcH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELV-ECDLEKRVQI  157 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~-G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~Dl~d~~~~  157 (380)
                      +++|+|.||||++|+.+++.|.++ +++++++.++.+..+.+.+..                 +.+..+ ..++.+.+..
T Consensus         2 m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g~~l~~~~-----------------~~~~~~~~~~~~~~~~~   64 (343)
T PRK00436          2 MIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSAGKPLSDVH-----------------PHLRGLVDLVLEPLDPE   64 (343)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccccCcchHHhC-----------------cccccccCceeecCCHH
Confidence            468999999999999999999987 578888777443222221100                 111111 1233333322


Q ss_pred             HHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCC
Q 016901          158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~  214 (380)
                        .+.++|+||.|.+..                ....++.++.+.|+ ++|=.|+..
T Consensus        65 --~~~~vD~Vf~alP~~----------------~~~~~v~~a~~aG~-~VID~S~~f  102 (343)
T PRK00436         65 --ILAGADVVFLALPHG----------------VSMDLAPQLLEAGV-KVIDLSADF  102 (343)
T ss_pred             --HhcCCCEEEECCCcH----------------HHHHHHHHHHhCCC-EEEECCccc
Confidence              457899999987531                24456666666664 677777643

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=97.40  E-value=0.0026  Score=62.16  Aligned_cols=108  Identities=16%  Similarity=0.160  Sum_probs=73.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC-------------------chhHHHHHHHHHhhhhcccccccC
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRS-------------------VQRAENLVQSVKQMKLDGELANKG  137 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~-------------------~~~~~~~~~~~~~~~~~~~~~~~~  137 (380)
                      ....+|+|.| .|++|+++++.|+..|. ++++++++                   ..|.+.+.+.+.+.+-        
T Consensus       133 l~~~~VlvvG-~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np--------  203 (376)
T PRK08762        133 LLEARVLLIG-AGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNP--------  203 (376)
T ss_pred             HhcCcEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCC--------
Confidence            3567899998 69999999999999996 78888887                   3455555555554320        


Q ss_pred             CCCCCceEEEEcCCCChhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCC
Q 016901          138 IQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (380)
Q Consensus       138 ~~~~~~v~~~~~Dl~d~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~  214 (380)
                         .-+++.+...+++ +.+.+.++++|+||++..               |...-..+-++|.+.++ .+|+.+..+
T Consensus       204 ---~v~v~~~~~~~~~-~~~~~~~~~~D~Vv~~~d---------------~~~~r~~ln~~~~~~~i-p~i~~~~~g  260 (376)
T PRK08762        204 ---DVQVEAVQERVTS-DNVEALLQDVDVVVDGAD---------------NFPTRYLLNDACVKLGK-PLVYGAVFR  260 (376)
T ss_pred             ---CCEEEEEeccCCh-HHHHHHHhCCCEEEECCC---------------CHHHHHHHHHHHHHcCC-CEEEEEecc
Confidence               1234444444443 456778899999999864               22223346677888886 577776644

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=97.40  E-value=0.00077  Score=63.34  Aligned_cols=116  Identities=19%  Similarity=0.172  Sum_probs=78.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G--~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ++|.|+|| |+||+.++..|+.++  .++++++..+++++.....+...          ......-..+.+| .+    -
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~----------~~~~~~~~~i~~~-~~----y   64 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHA----------AAPLGSDVKITGD-GD----Y   64 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhc----------chhccCceEEecC-CC----h
Confidence            47999999 999999999998876  48999999865544332222111          0000111122222 11    4


Q ss_pred             HHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEcc
Q 016901          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS  212 (380)
                      +.++++|+|+-+||.......+..+.++.|..-...+.+...+.+.+-++.+-|
T Consensus        65 ~~~~~aDiVvitAG~prKpGmtR~DLl~~Na~I~~~i~~~i~~~~~d~ivlVvt  118 (313)
T COG0039          65 EDLKGADIVVITAGVPRKPGMTRLDLLEKNAKIVKDIAKAIAKYAPDAIVLVVT  118 (313)
T ss_pred             hhhcCCCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCeEEEEec
Confidence            567899999999997655544555668889999999999998888765555555

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=97.39  E-value=0.0037  Score=59.30  Aligned_cols=114  Identities=19%  Similarity=0.149  Sum_probs=73.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G--~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      |+|.|.|+ |.+|..++..|+.+|  .+|.++++++++.......+....          .......+..+|      + 
T Consensus         1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~----------~~~~~~~i~~~d------~-   62 (308)
T cd05292           1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGT----------PFVKPVRIYAGD------Y-   62 (308)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccc----------cccCCeEEeeCC------H-
Confidence            47999996 999999999999999  589999999876653322222110          000122222222      2 


Q ss_pred             HHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEcc
Q 016901          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS  212 (380)
                      +.++++|+||.+++.......+.......|+.-.+.+++.+.+.+.+-++.+-+
T Consensus        63 ~~l~~aDiViita~~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~~~~giiiv~t  116 (308)
T cd05292          63 ADCKGADVVVITAGANQKPGETRLDLLKRNVAIFKEIIPQILKYAPDAILLVVT  116 (308)
T ss_pred             HHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            457899999999986543323333345668888888888888776554444443

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN02602 lactate dehydrogenase

Probab=97.38  E-value=0.0017  Score=62.53  Aligned_cols=114  Identities=10%  Similarity=0.098  Sum_probs=76.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G--~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ++|.|+|+ |.||+.++..|+..|  .++++++.+++++......+.....          ......+.. +    .+++
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~----------~~~~~~i~~-~----~dy~  101 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAA----------FLPRTKILA-S----TDYA  101 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhh----------cCCCCEEEe-C----CCHH
Confidence            68999995 999999999999888  3789999988776655544443210          001222222 1    1233


Q ss_pred             HHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCC-EEEEEc
Q 016901          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVS  211 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~-r~V~~S  211 (380)
                       .++++|+||-+||.......+..+.+..|+.-.+.+.+.+++.+.+ .++.+|
T Consensus       102 -~~~daDiVVitAG~~~k~g~tR~dll~~N~~I~~~i~~~I~~~~p~~ivivvt  154 (350)
T PLN02602        102 -VTAGSDLCIVTAGARQIPGESRLNLLQRNVALFRKIIPELAKYSPDTILLIVS  154 (350)
T ss_pred             -HhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence             3789999999999754433333445677888888889988888755 445544

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=97.38  E-value=0.0042  Score=55.60  Aligned_cols=107  Identities=17%  Similarity=0.261  Sum_probs=71.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCc------------------hhHHHHHHHHHhhhhcccccccCC
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV------------------QRAENLVQSVKQMKLDGELANKGI  138 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~------------------~~~~~~~~~~~~~~~~~~~~~~~~  138 (380)
                      ....+|+|.| .|.+|+.+++.|++.|. ++++++.+.                  .|.+.+.+.+..++          
T Consensus        26 L~~~~V~ViG-~GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~ln----------   94 (212)
T PRK08644         26 LKKAKVGIAG-AGGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEIN----------   94 (212)
T ss_pred             HhCCCEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHC----------
Confidence            3567899999 79999999999999996 588888762                  23344444443332          


Q ss_pred             CCCCceEEEEcCCCChhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHc-CCCEEEEEccC
Q 016901          139 QPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA-KVNHFIMVSSL  213 (380)
Q Consensus       139 ~~~~~v~~~~~Dl~d~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~-~v~r~V~~SS~  213 (380)
                       +.-+++.+...+++ +.+.+.++++|+||.|.-               |...-..+.+.|.+. ++ .+|+.+..
T Consensus        95 -p~v~v~~~~~~i~~-~~~~~~~~~~DvVI~a~D---------------~~~~r~~l~~~~~~~~~~-p~I~~~~~  152 (212)
T PRK08644         95 -PFVEIEAHNEKIDE-DNIEELFKDCDIVVEAFD---------------NAETKAMLVETVLEHPGK-KLVAASGM  152 (212)
T ss_pred             -CCCEEEEEeeecCH-HHHHHHHcCCCEEEECCC---------------CHHHHHHHHHHHHHhCCC-CEEEeehh
Confidence             11345556656654 456778899999999842               333345566778777 64 57766543

>cd05295 MDH_like Malate dehydrogenase-like

Probab=97.37  E-value=0.0025  Score=63.04  Aligned_cols=118  Identities=13%  Similarity=0.110  Sum_probs=78.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHC---C----CeEEEEeC--CchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEc
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKL---G----FRVRAGVR--SVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVEC  149 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~---G----~~V~~l~R--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  149 (380)
                      ..-+|+||||+|.||.+|+-.+++=   |    ..+++++.  +.++++...-++....++-         ..++.+.. 
T Consensus       122 ~p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pl---------l~~v~i~~-  191 (452)
T cd05295         122 NPLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPL---------LRGISVTT-  191 (452)
T ss_pred             CceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhh---------cCCcEEEE-
Confidence            4468999999999999999888762   4    23556666  4555555554444332110         02233321 


Q ss_pred             CCCChhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCC--CEEEEEcc
Q 016901          150 DLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKV--NHFIMVSS  212 (380)
Q Consensus       150 Dl~d~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v--~r~V~~SS  212 (380)
                            .-.++++++|+||-++|.......+.....+.|..-.+.+.++..+.+.  .+++.+.|
T Consensus       192 ------~~~ea~~daDvvIitag~prk~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~t  250 (452)
T cd05295         192 ------DLDVAFKDAHVIVLLDDFLIKEGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGR  250 (452)
T ss_pred             ------CCHHHhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeC
Confidence                  1257889999999999976443334444577888888999999888775  56666665

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=97.37  E-value=0.0049  Score=57.02  Aligned_cols=108  Identities=20%  Similarity=0.265  Sum_probs=68.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCCc-------------------hhHHHHHHHHHhhhhcccccccC
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKG  137 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G-~~V~~l~R~~-------------------~~~~~~~~~~~~~~~~~~~~~~~  137 (380)
                      +...+|+|.| .|++|+++++.|++.| -++++++.+.                   .+.+.+.+.+...+         
T Consensus        28 L~~s~VlVvG-~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~IN---------   97 (268)
T PRK15116         28 FADAHICVVG-IGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQIN---------   97 (268)
T ss_pred             hcCCCEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHC---------
Confidence            4567899999 8999999999999999 5788877653                   12233333333322         


Q ss_pred             CCCCCceEEEEcCCCChhcHHHHhc-CCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCC
Q 016901          138 IQPVEMLELVECDLEKRVQIEPALG-NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (380)
Q Consensus       138 ~~~~~~v~~~~~Dl~d~~~~~~a~~-~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~  214 (380)
                        +.-+++.+. +..+++.+.+.+. ++|+||.+...               +..-..+.+.|.+.++ .||.+..++
T Consensus        98 --P~~~V~~i~-~~i~~e~~~~ll~~~~D~VIdaiD~---------------~~~k~~L~~~c~~~~i-p~I~~gGag  156 (268)
T PRK15116         98 --PECRVTVVD-DFITPDNVAEYMSAGFSYVIDAIDS---------------VRPKAALIAYCRRNKI-PLVTTGGAG  156 (268)
T ss_pred             --CCcEEEEEe-cccChhhHHHHhcCCCCEEEEcCCC---------------HHHHHHHHHHHHHcCC-CEEEECCcc
Confidence              112344443 2334566666764 69999998752               2334557888888876 455554444

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=97.37  E-value=0.0054  Score=51.15  Aligned_cols=104  Identities=18%  Similarity=0.269  Sum_probs=69.8

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCc-------------------hhHHHHHHHHHhhhhcccccccCCCCC
Q 016901           82 LAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKGIQPV  141 (380)
Q Consensus        82 ~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (380)
                      +|+|.| .|.+|+++++.|+..|. ++++++.+.                   .|.+.+.+.+++++           +.
T Consensus         1 ~VliiG-~GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~-----------p~   68 (143)
T cd01483           1 RVLLVG-LGGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELN-----------PG   68 (143)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHC-----------CC
Confidence            489999 59999999999999996 688776542                   23444444444432           11


Q ss_pred             CceEEEEcCCCChhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCC
Q 016901          142 EMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (380)
Q Consensus       142 ~~v~~~~~Dl~d~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~  214 (380)
                      -+++.+..++.+. ...+.+.+.|+||.+..               |......+.++|++.++ .+|..++.+
T Consensus        69 v~i~~~~~~~~~~-~~~~~~~~~diVi~~~d---------------~~~~~~~l~~~~~~~~i-~~i~~~~~g  124 (143)
T cd01483          69 VNVTAVPEGISED-NLDDFLDGVDLVIDAID---------------NIAVRRALNRACKELGI-PVIDAGGLG  124 (143)
T ss_pred             cEEEEEeeecChh-hHHHHhcCCCEEEECCC---------------CHHHHHHHHHHHHHcCC-CEEEEcCCC
Confidence            3444555555443 34677789999999864               23445667788988885 477777655

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=97.36  E-value=0.003  Score=61.10  Aligned_cols=108  Identities=19%  Similarity=0.165  Sum_probs=72.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCc-------------------hhHHHHHHHHHhhhhcccccccC
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKG  137 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~-------------------~~~~~~~~~~~~~~~~~~~~~~~  137 (380)
                      ....+|+|.| .|++|+++++.|+..|. ++++++.+.                   .|.+...+.++.++         
T Consensus        26 L~~~~VlivG-~GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~n---------   95 (355)
T PRK05597         26 LFDAKVAVIG-AGGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALN---------   95 (355)
T ss_pred             HhCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHC---------
Confidence            3567899999 69999999999999995 677777654                   34455555555443         


Q ss_pred             CCCCCceEEEEcCCCChhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCC
Q 016901          138 IQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (380)
Q Consensus       138 ~~~~~~v~~~~~Dl~d~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~  214 (380)
                        +.-+++.+...++. +...+.+.++|+||.+..               |...-..+-++|.+.++ .+|+.+..+
T Consensus        96 --p~v~v~~~~~~i~~-~~~~~~~~~~DvVvd~~d---------------~~~~r~~~n~~c~~~~i-p~v~~~~~g  153 (355)
T PRK05597         96 --PDVKVTVSVRRLTW-SNALDELRDADVILDGSD---------------NFDTRHLASWAAARLGI-PHVWASILG  153 (355)
T ss_pred             --CCcEEEEEEeecCH-HHHHHHHhCCCEEEECCC---------------CHHHHHHHHHHHHHcCC-CEEEEEEec
Confidence              11345555556653 456678899999999863               22333345577888875 477766543

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=97.36  E-value=0.0047  Score=56.59  Aligned_cols=108  Identities=15%  Similarity=0.246  Sum_probs=70.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCc-------------------hhHHHHHHHHHhhhhcccccccC
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKG  137 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~-------------------~~~~~~~~~~~~~~~~~~~~~~~  137 (380)
                      ....+|+|.|+ |.+|+.+++.|+..|. ++++++.+.                   .|.+...+.+.+++         
T Consensus        30 L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~ln---------   99 (245)
T PRK05690         30 LKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARIN---------   99 (245)
T ss_pred             hcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHC---------
Confidence            35678999996 9999999999999995 677776543                   23333333343332         


Q ss_pred             CCCCCceEEEEcCCCChhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCC
Q 016901          138 IQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (380)
Q Consensus       138 ~~~~~~v~~~~~Dl~d~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~  214 (380)
                        +.-+++.+...++ .+.+.+.+.++|+||.+..               |...-..+-++|.+.++ .+|+.++.+
T Consensus       100 --p~v~i~~~~~~i~-~~~~~~~~~~~DiVi~~~D---------------~~~~r~~ln~~~~~~~i-p~v~~~~~g  157 (245)
T PRK05690        100 --PHIAIETINARLD-DDELAALIAGHDLVLDCTD---------------NVATRNQLNRACFAAKK-PLVSGAAIR  157 (245)
T ss_pred             --CCCEEEEEeccCC-HHHHHHHHhcCCEEEecCC---------------CHHHHHHHHHHHHHhCC-EEEEeeecc
Confidence              1134555555554 3456778899999999863               22333446677888875 577655433

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=97.36  E-value=0.0051  Score=53.28  Aligned_cols=101  Identities=17%  Similarity=0.298  Sum_probs=66.1

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCc------------------hhHHHHHHHHHhhhhcccccccCCCCCC
Q 016901           82 LAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV------------------QRAENLVQSVKQMKLDGELANKGIQPVE  142 (380)
Q Consensus        82 ~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (380)
                      +|+|.| .|.+|+++++.|++.|. ++++++.+.                  .|.+...+.+++++           +.-
T Consensus         1 ~VlViG-~GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~ln-----------p~v   68 (174)
T cd01487           1 KVGIAG-AGGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREIN-----------PFV   68 (174)
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHC-----------CCC
Confidence            489999 79999999999999997 598888865                  23333333333322           113


Q ss_pred             ceEEEEcCCCChhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHc-CCCEEEEEc
Q 016901          143 MLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA-KVNHFIMVS  211 (380)
Q Consensus       143 ~v~~~~~Dl~d~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~-~v~r~V~~S  211 (380)
                      +++.+...+++ +.+.+.++++|.||.+..               |...-..+.+.+.+. ++ .+|+.+
T Consensus        69 ~i~~~~~~~~~-~~~~~~l~~~DlVi~~~d---------------~~~~r~~i~~~~~~~~~i-p~i~~~  121 (174)
T cd01487          69 KIEAINIKIDE-NNLEGLFGDCDIVVEAFD---------------NAETKAMLAESLLGNKNK-PVVCAS  121 (174)
T ss_pred             EEEEEEeecCh-hhHHHHhcCCCEEEECCC---------------CHHHHHHHHHHHHHHCCC-CEEEEe
Confidence            45555555544 557788899999999842               223334466777666 64 466554

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.35  E-value=0.0011  Score=56.07  Aligned_cols=75  Identities=17%  Similarity=0.275  Sum_probs=53.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      ++++|+|+|+ |.+|..+++.|++.| ++|++.+|+.++.+++.+.+..                .  .+..+..+   .
T Consensus        18 ~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~----------------~--~~~~~~~~---~   75 (155)
T cd01065          18 KGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGE----------------L--GIAIAYLD---L   75 (155)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhh----------------c--ccceeecc---h
Confidence            4678999996 999999999999996 8899999998877665543221                0  01122322   3


Q ss_pred             HHHhcCCCEEEEccccCc
Q 016901          158 EPALGNASVVICCIGASE  175 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag~~~  175 (380)
                      .++++++|+||++.+...
T Consensus        76 ~~~~~~~Dvvi~~~~~~~   93 (155)
T cd01065          76 EELLAEADLIINTTPVGM   93 (155)
T ss_pred             hhccccCCEEEeCcCCCC
Confidence            445789999999987543

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=97.35  E-value=0.0036  Score=60.91  Aligned_cols=117  Identities=12%  Similarity=0.029  Sum_probs=77.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-e----EEE--E--eCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEc
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGF-R----VRA--G--VRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVEC  149 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~-~----V~~--l--~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  149 (380)
                      +.-+|.|+||+|.+|.+++-.|+..|. +    |.+  +  +++.++++.....+......         ...++.+..+
T Consensus        43 ~p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~---------~~~~v~i~~~  113 (387)
T TIGR01757        43 KTVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYP---------LLREVSIGID  113 (387)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhh---------hcCceEEecC
Confidence            345899999999999999999998873 3    333  3  67777766655544432111         0022222221


Q ss_pred             CCCChhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcC-CC-EEEEEc
Q 016901          150 DLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK-VN-HFIMVS  211 (380)
Q Consensus       150 Dl~d~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~-v~-r~V~~S  211 (380)
                      |       .+.++++|+||.+||.......+..+.+..|+.-.+.+...+.++. .. ++|.+|
T Consensus       114 ~-------y~~~kdaDIVVitAG~prkpg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVs  170 (387)
T TIGR01757       114 P-------YEVFEDADWALLIGAKPRGPGMERADLLDINGQIFADQGKALNAVASKNCKVLVVG  170 (387)
T ss_pred             C-------HHHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcC
Confidence            1       4678899999999997644434445557789999999999998844 44 455555

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=97.35  E-value=0.0042  Score=56.71  Aligned_cols=108  Identities=14%  Similarity=0.274  Sum_probs=70.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCc-------------------hhHHHHHHHHHhhhhcccccccC
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKG  137 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~-------------------~~~~~~~~~~~~~~~~~~~~~~~  137 (380)
                      ....+|+|.| .|++|+.+++.|+..|. ++++++.+.                   .|.+.+.+.+++++         
T Consensus        22 L~~~~VlvvG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~in---------   91 (240)
T TIGR02355        22 LKASRVLIVG-LGGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQIN---------   91 (240)
T ss_pred             HhCCcEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHC---------
Confidence            3556899999 89999999999999995 677776643                   23333444444332         


Q ss_pred             CCCCCceEEEEcCCCChhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCC
Q 016901          138 IQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (380)
Q Consensus       138 ~~~~~~v~~~~~Dl~d~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~  214 (380)
                        +.-+++.+...++ .+.+.+.+.++|+||.+.-               |...-..+-++|.+.++ .+|+.++.+
T Consensus        92 --p~v~i~~~~~~i~-~~~~~~~~~~~DlVvd~~D---------------~~~~r~~ln~~~~~~~i-p~v~~~~~g  149 (240)
T TIGR02355        92 --PHIAINPINAKLD-DAELAALIAEHDIVVDCTD---------------NVEVRNQLNRQCFAAKV-PLVSGAAIR  149 (240)
T ss_pred             --CCcEEEEEeccCC-HHHHHHHhhcCCEEEEcCC---------------CHHHHHHHHHHHHHcCC-CEEEEEecc
Confidence              1123444444443 3557788899999999863               23334445678888876 577766544

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.30  E-value=0.00056  Score=65.50  Aligned_cols=94  Identities=20%  Similarity=0.205  Sum_probs=56.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCe---EEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFR---VRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~---V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~  155 (380)
                      ++++|.|+||||++|..+++.|.+++|.   +..+. +.++..+..                 . ..+   ...++.+.+
T Consensus         3 ~~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~-s~~~aG~~l-----------------~-~~~---~~l~~~~~~   60 (336)
T PRK05671          3 QPLDIAVVGATGTVGEALVQILEERDFPVGTLHLLA-SSESAGHSV-----------------P-FAG---KNLRVREVD   60 (336)
T ss_pred             CCCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEE-CcccCCCee-----------------c-cCC---cceEEeeCC
Confidence            3478999999999999999999987764   33443 332211100                 0 011   123333333


Q ss_pred             cHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccC
Q 016901          156 QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL  213 (380)
Q Consensus       156 ~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~  213 (380)
                      ..  .++++|.||.+++..                -...++..+.+.|+ ++|=.|+.
T Consensus        61 ~~--~~~~vD~vFla~p~~----------------~s~~~v~~~~~~G~-~VIDlS~~   99 (336)
T PRK05671         61 SF--DFSQVQLAFFAAGAA----------------VSRSFAEKARAAGC-SVIDLSGA   99 (336)
T ss_pred             hH--HhcCCCEEEEcCCHH----------------HHHHHHHHHHHCCC-eEEECchh
Confidence            22  257899999987521                13447777777776 46666664

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=97.30  E-value=0.083  Score=44.52  Aligned_cols=200  Identities=15%  Similarity=0.124  Sum_probs=108.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCC--C-hhc
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLE--K-RVQ  156 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~--d-~~~  156 (380)
                      ..+|+|-||-|-+|+++++.+..++|-|.-++-.++...                       .--.++.+|-.  + .++
T Consensus         3 agrVivYGGkGALGSacv~~FkannywV~siDl~eNe~A-----------------------d~sI~V~~~~swtEQe~~   59 (236)
T KOG4022|consen    3 AGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQA-----------------------DSSILVDGNKSWTEQEQS   59 (236)
T ss_pred             CceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccccc-----------------------cceEEecCCcchhHHHHH
Confidence            457999999999999999999999999887766543211                       11223334322  1 122


Q ss_pred             H----HHHh--cCCCEEEEccccCccccCC-------CCCcchhhHHHHHHHHHHH-HHcCCCEEEEEccCCCCCCCCch
Q 016901          157 I----EPAL--GNASVVICCIGASEKEVFD-------ITGPYRIDFQATKNLVDAA-TIAKVNHFIMVSSLGTNKFGFPA  222 (380)
Q Consensus       157 ~----~~a~--~~~d~Vi~~Ag~~~~~~~~-------~~~~~~~nv~g~~~ll~a~-~~~~v~r~V~~SS~~~~~~~~~~  222 (380)
                      +    .+.+  +.+|+||+.||........       ..-+++-.+....--...+ ...+.+-++-+..+...-.+   
T Consensus        60 v~~~vg~sL~gekvDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGAkaAl~g---  136 (236)
T KOG4022|consen   60 VLEQVGSSLQGEKVDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGAKAALGG---  136 (236)
T ss_pred             HHHHHHHhhcccccceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeecccccccCC---
Confidence            2    2233  3599999999854221111       1111222222111111111 11122334444443322222   


Q ss_pred             hhhchhhHHHHHHHHHHHHHHH-----CCCC----EEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHH
Q 016901          223 AILNLFWGVLLWKRKAEEALIA-----SGLP----YTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA  293 (380)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~~-----~g~~----~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~  293 (380)
                        .+.+-+|+..|.+..++++.     +|++    ...|-|-.+..|..+      ...  ...-++.|....-+++.+.
T Consensus       137 --TPgMIGYGMAKaAVHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNR------KwM--P~ADfssWTPL~fi~e~fl  206 (236)
T KOG4022|consen  137 --TPGMIGYGMAKAAVHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNR------KWM--PNADFSSWTPLSFISEHFL  206 (236)
T ss_pred             --CCcccchhHHHHHHHHHHHHhcccccCCCCCceeEEEeeeeccCcccc------ccC--CCCcccCcccHHHHHHHHH
Confidence              23445899999999999873     4554    445556666655321      111  1222456788888888877


Q ss_pred             HHHhCC-CCccCcEEEEecCCCC
Q 016901          294 CMAKNR-SLSYCKVVEVIAETTA  315 (380)
Q Consensus       294 ~~l~~~-~~~~~~~~ni~~~~~~  315 (380)
                      .-.... ..+.+..+.+...+..
T Consensus       207 kWtt~~~RPssGsLlqi~TtnG~  229 (236)
T KOG4022|consen  207 KWTTETSRPSSGSLLQITTTNGT  229 (236)
T ss_pred             HHhccCCCCCCCceEEEEecCCe
Confidence            666542 2345666766655443

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=97.30  E-value=0.0015  Score=53.00  Aligned_cols=96  Identities=24%  Similarity=0.251  Sum_probs=55.0

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCC-CeEEEE-eCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           82 LAFVAGATGKVGSRTVRELLKLG-FRVRAG-VRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        82 ~vlVtGatG~iG~~lv~~Ll~~G-~~V~~l-~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      +|.|.||||++|+.+++.|+++. ++++.+ .++.+....+.......           .....+.+..   .+    .+
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~-----------~~~~~~~~~~---~~----~~   62 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHP-----------KGFEDLSVED---AD----PE   62 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGG-----------TTTEEEBEEE---TS----GH
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhcccc-----------ccccceeEee---cc----hh
Confidence            58999999999999999999974 565554 44442222222111100           0001222222   12    23


Q ss_pred             HhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEcc
Q 016901          160 ALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (380)
Q Consensus       160 a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS  212 (380)
                      .+.++|+||.|.+.                .....+...+.+.|+ ++|=.|+
T Consensus        63 ~~~~~Dvvf~a~~~----------------~~~~~~~~~~~~~g~-~ViD~s~   98 (121)
T PF01118_consen   63 ELSDVDVVFLALPH----------------GASKELAPKLLKAGI-KVIDLSG   98 (121)
T ss_dssp             HHTTESEEEE-SCH----------------HHHHHHHHHHHHTTS-EEEESSS
T ss_pred             HhhcCCEEEecCch----------------hHHHHHHHHHhhCCc-EEEeCCH
Confidence            44899999999753                135566677777776 4555554

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PRK08223 hypothetical protein; Validated

Probab=97.29  E-value=0.0062  Score=56.68  Aligned_cols=110  Identities=19%  Similarity=0.279  Sum_probs=72.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCc-------------------hhHHHHHHHHHhhhhcccccccC
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKG  137 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~-------------------~~~~~~~~~~~~~~~~~~~~~~~  137 (380)
                      ....+|+|.| .|++|+.+++.|+..|. ++++++.+.                   .|.+...+.+++++         
T Consensus        25 L~~s~VlIvG-~GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iN---------   94 (287)
T PRK08223         25 LRNSRVAIAG-LGGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDIN---------   94 (287)
T ss_pred             HhcCCEEEEC-CCHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHC---------
Confidence            3567899999 89999999999999995 677776643                   23444444444433         


Q ss_pred             CCCCCceEEEEcCCCChhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCC
Q 016901          138 IQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (380)
Q Consensus       138 ~~~~~~v~~~~~Dl~d~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~  214 (380)
                        +.-+++.+...++ .+...++++++|.||.+.-..             ++..-..+-++|.+.++ .+|+.+..+
T Consensus        95 --P~v~V~~~~~~l~-~~n~~~ll~~~DlVvD~~D~~-------------~~~~r~~ln~~c~~~~i-P~V~~~~~g  154 (287)
T PRK08223         95 --PELEIRAFPEGIG-KENADAFLDGVDVYVDGLDFF-------------EFDARRLVFAACQQRGI-PALTAAPLG  154 (287)
T ss_pred             --CCCEEEEEecccC-ccCHHHHHhCCCEEEECCCCC-------------cHHHHHHHHHHHHHcCC-CEEEEeccC
Confidence              1134555666665 455788899999999764210             12233446678888885 577776644

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=97.28  E-value=0.0064  Score=53.81  Aligned_cols=109  Identities=20%  Similarity=0.306  Sum_probs=71.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCch---------------------hHHHHHHHHHhhhhccccccc
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQ---------------------RAENLVQSVKQMKLDGELANK  136 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~---------------------~~~~~~~~~~~~~~~~~~~~~  136 (380)
                      +..+|+|.|++ .+|.++++.|+..|. ++++++.+.-                     +.+...+.+++++        
T Consensus        18 ~~s~VlviG~g-glGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lN--------   88 (198)
T cd01485          18 RSAKVLIIGAG-ALGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELN--------   88 (198)
T ss_pred             hhCcEEEECCC-HHHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHC--------
Confidence            45689999955 599999999999995 6777775421                     2223333333332        


Q ss_pred             CCCCCCceEEEEcCCCC-hhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCC
Q 016901          137 GIQPVEMLELVECDLEK-RVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT  215 (380)
Q Consensus       137 ~~~~~~~v~~~~~Dl~d-~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~  215 (380)
                         +.-+++.+..++.+ .+...+.+.++|+||.+..               +......+-+.|++.++ .+|+.++.|.
T Consensus        89 ---p~v~i~~~~~~~~~~~~~~~~~~~~~dvVi~~~d---------------~~~~~~~ln~~c~~~~i-p~i~~~~~G~  149 (198)
T cd01485          89 ---PNVKLSIVEEDSLSNDSNIEEYLQKFTLVIATEE---------------NYERTAKVNDVCRKHHI-PFISCATYGL  149 (198)
T ss_pred             ---CCCEEEEEecccccchhhHHHHHhCCCEEEECCC---------------CHHHHHHHHHHHHHcCC-CEEEEEeecC
Confidence               11345556556642 3456677889999998742               22334456688888886 5888887665

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.28  E-value=0.0015  Score=60.89  Aligned_cols=74  Identities=20%  Similarity=0.324  Sum_probs=53.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      .+++++|+|+ |.+|+.++..|++.|++|+++.|+.++.+++.+.+...              ..+...  ++.+     
T Consensus       116 ~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~--------------~~~~~~--~~~~-----  173 (270)
T TIGR00507       116 PNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRY--------------GEIQAF--SMDE-----  173 (270)
T ss_pred             cCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhc--------------CceEEe--chhh-----
Confidence            4678999997 89999999999999999999999988877766544321              112222  1111     


Q ss_pred             HHhcCCCEEEEccccC
Q 016901          159 PALGNASVVICCIGAS  174 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~  174 (380)
                      ..+.++|+||++.+..
T Consensus       174 ~~~~~~DivInatp~g  189 (270)
T TIGR00507       174 LPLHRVDLIINATSAG  189 (270)
T ss_pred             hcccCccEEEECCCCC
Confidence            1235799999998753

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=97.26  E-value=0.0025  Score=66.08  Aligned_cols=73  Identities=14%  Similarity=0.157  Sum_probs=63.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      .++|+|.| .|.+|+.+++.|.++|++++++++|+++.+.+.+                   .+..++.||.+|++.+++
T Consensus       400 ~~~vII~G-~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~-------------------~g~~v~~GDat~~~~L~~  459 (601)
T PRK03659        400 KPQVIIVG-FGRFGQVIGRLLMANKMRITVLERDISAVNLMRK-------------------YGYKVYYGDATQLELLRA  459 (601)
T ss_pred             cCCEEEec-CchHHHHHHHHHHhCCCCEEEEECCHHHHHHHHh-------------------CCCeEEEeeCCCHHHHHh
Confidence            35799999 8999999999999999999999999988776643                   467899999999998887


Q ss_pred             H-hcCCCEEEEccc
Q 016901          160 A-LGNASVVICCIG  172 (380)
Q Consensus       160 a-~~~~d~Vi~~Ag  172 (380)
                      + ++++|.||-+..
T Consensus       460 agi~~A~~vv~~~~  473 (601)
T PRK03659        460 AGAEKAEAIVITCN  473 (601)
T ss_pred             cCCccCCEEEEEeC
Confidence            6 578999998764

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=97.25  E-value=0.0011  Score=63.94  Aligned_cols=99  Identities=18%  Similarity=0.150  Sum_probs=60.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHC-CCeEEEE-eCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEE-EcCCCChhcH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKL-GFRVRAG-VRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELV-ECDLEKRVQI  157 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~-G~~V~~l-~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~Dl~d~~~~  157 (380)
                      ++|.|.||||++|..+++.|.++ +++++.+ +++.+..+.+.+..                 +.+... ..++.+ .+.
T Consensus         1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sagk~~~~~~-----------------~~l~~~~~~~~~~-~~~   62 (346)
T TIGR01850         1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAGKPVSEVH-----------------PHLRGLVDLNLEP-IDE   62 (346)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcCCChHHhC-----------------ccccccCCceeec-CCH
Confidence            47999999999999999999987 5788854 54432211111100                 111111 111221 123


Q ss_pred             HHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCC
Q 016901          158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~  214 (380)
                      ++++.++|+||.|.+..                ....++..+.+.| .++|=.|+..
T Consensus        63 ~~~~~~~DvVf~alP~~----------------~s~~~~~~~~~~G-~~VIDlS~~f  102 (346)
T TIGR01850        63 EEIAEDADVVFLALPHG----------------VSAELAPELLAAG-VKVIDLSADF  102 (346)
T ss_pred             HHhhcCCCEEEECCCch----------------HHHHHHHHHHhCC-CEEEeCChhh
Confidence            44446899999998632                3556677776677 4788888753

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=97.22  E-value=0.0028  Score=60.08  Aligned_cols=116  Identities=13%  Similarity=0.043  Sum_probs=70.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      |+|.|.|+ |.+|..++..|+.+|+ +|++++..++........+......         ......     +.-..++++
T Consensus         2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~~---------~~~~~~-----i~~t~d~~~   66 (305)
T TIGR01763         2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASPV---------GGFDTK-----VTGTNNYAD   66 (305)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhhc---------cCCCcE-----EEecCCHHH
Confidence            47999995 9999999999999886 8999998765433221111110000         000111     111123444


Q ss_pred             HhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCC-EEEEEcc
Q 016901          160 ALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVSS  212 (380)
Q Consensus       160 a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~-r~V~~SS  212 (380)
                       +.++|.||-++|.......+....+..|..-.+.+++.+.+.+.. .+|.+|.
T Consensus        67 -~~~aDiVIitag~p~~~~~sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~tN  119 (305)
T TIGR01763        67 -TANSDIVVITAGLPRKPGMSREDLLSMNAGIVREVTGRIMEHSPNPIIVVVSN  119 (305)
T ss_pred             -hCCCCEEEEcCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence             689999999999654322222234567888888888888877644 4555543

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=97.22  E-value=0.0012  Score=70.24  Aligned_cols=162  Identities=15%  Similarity=0.144  Sum_probs=105.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFR-VRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~-V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      .++.+|+||-|+.|..|+..|..+|.+ +++.+|+.-+..-....++.+.-.+          -.|.+-.-|++..+...
T Consensus      1768 eksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~G----------VqV~vsT~nitt~~ga~ 1837 (2376)
T KOG1202|consen 1768 EKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRG----------VQVQVSTSNITTAEGAR 1837 (2376)
T ss_pred             cceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcC----------eEEEEecccchhhhhHH
Confidence            468999999999999999999999975 5555676644433333344432111          23444445666666555


Q ss_pred             HHh------cCCCEEEEccccCc------cccCCCCCcchhhHHHHHHHHHHHHHcC--CCEEEEEccCCCCCCCCchhh
Q 016901          159 PAL------GNASVVICCIGASE------KEVFDITGPYRIDFQATKNLVDAATIAK--VNHFIMVSSLGTNKFGFPAAI  224 (380)
Q Consensus       159 ~a~------~~~d~Vi~~Ag~~~------~~~~~~~~~~~~nv~g~~~ll~a~~~~~--v~r~V~~SS~~~~~~~~~~~~  224 (380)
                      +++      +.+-.|||+|..-.      ....++...-+.-+.||.|+=++.++.-  .+-||.+||........    
T Consensus      1838 ~Li~~s~kl~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSvscGRGN~---- 1913 (2376)
T KOG1202|consen 1838 GLIEESNKLGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSSVSCGRGNA---- 1913 (2376)
T ss_pred             HHHHHhhhcccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEeecccCCCC----
Confidence            555      34788999987431      1222233333445677888777766654  56899999976644332    


Q ss_pred             hchhhHHHHHHHHHHHHHHH---CCCCEEEEecCcc
Q 016901          225 LNLFWGVLLWKRKAEEALIA---SGLPYTIVRPGGM  257 (380)
Q Consensus       225 ~~~~~~Y~~sK~~~E~~l~~---~g~~~~ivRpg~v  257 (380)
                        ..+.|+.+..+.|+++.+   .|++-+.|.=|.|
T Consensus      1914 --GQtNYG~aNS~MERiceqRr~~GfPG~AiQWGAI 1947 (2376)
T KOG1202|consen 1914 --GQTNYGLANSAMERICEQRRHEGFPGTAIQWGAI 1947 (2376)
T ss_pred             --cccccchhhHHHHHHHHHhhhcCCCcceeeeecc
Confidence              224599999999999974   7888777777665

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=97.22  E-value=0.0031  Score=64.91  Aligned_cols=73  Identities=25%  Similarity=0.238  Sum_probs=62.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      ..+++|.| .|.+|+++++.|.++|++|+++++++++.+...+                   .+...+.||.+|++.+++
T Consensus       417 ~~hiiI~G-~G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~-------------------~g~~~i~GD~~~~~~L~~  476 (558)
T PRK10669        417 CNHALLVG-YGRVGSLLGEKLLAAGIPLVVIETSRTRVDELRE-------------------RGIRAVLGNAANEEIMQL  476 (558)
T ss_pred             CCCEEEEC-CChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH-------------------CCCeEEEcCCCCHHHHHh
Confidence            35799999 8999999999999999999999999988776654                   568899999999998886


Q ss_pred             H-hcCCCEEEEccc
Q 016901          160 A-LGNASVVICCIG  172 (380)
Q Consensus       160 a-~~~~d~Vi~~Ag  172 (380)
                      + ++++|.|+-+.+
T Consensus       477 a~i~~a~~viv~~~  490 (558)
T PRK10669        477 AHLDCARWLLLTIP  490 (558)
T ss_pred             cCccccCEEEEEcC
Confidence            5 478998887654

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=97.21  E-value=0.0083  Score=53.06  Aligned_cols=108  Identities=14%  Similarity=0.169  Sum_probs=69.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCc-------------------hhHHHHHHHHHhhhhcccccccC
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKG  137 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~-------------------~~~~~~~~~~~~~~~~~~~~~~~  137 (380)
                      ....+|+|.| .|.+|.++++.|+..|. ++++++.+.                   .|.+...+.+++++         
T Consensus        19 L~~s~VlIiG-~gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lN---------   88 (197)
T cd01492          19 LRSARILLIG-LKGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALN---------   88 (197)
T ss_pred             HHhCcEEEEc-CCHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHC---------
Confidence            3567899999 55599999999999995 677776542                   23344444444433         


Q ss_pred             CCCCCceEEEEcCCCChhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCC
Q 016901          138 IQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT  215 (380)
Q Consensus       138 ~~~~~~v~~~~~Dl~d~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~  215 (380)
                        +.-+++.+...+.+  ...+.+.++|+||.+..               |...-..+-++|++.++ .+|+.++.+.
T Consensus        89 --p~v~i~~~~~~~~~--~~~~~~~~~dvVi~~~~---------------~~~~~~~ln~~c~~~~i-p~i~~~~~G~  146 (197)
T cd01492          89 --PRVKVSVDTDDISE--KPEEFFSQFDVVVATEL---------------SRAELVKINELCRKLGV-KFYATGVHGL  146 (197)
T ss_pred             --CCCEEEEEecCccc--cHHHHHhCCCEEEECCC---------------CHHHHHHHHHHHHHcCC-CEEEEEecCC
Confidence              11345555555542  34566789999998743               12234446678888886 5788777654

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=97.21  E-value=0.0057  Score=59.48  Aligned_cols=106  Identities=16%  Similarity=0.210  Sum_probs=71.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCc-------------------hhHHHHHHHHHhhhhcccccccC
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKG  137 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~-------------------~~~~~~~~~~~~~~~~~~~~~~~  137 (380)
                      ....+|+|.| .|++|+.+++.|+..|. ++++++.+.                   .|.+.+.+.+.+++         
T Consensus        39 l~~~~VliiG-~GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~n---------  108 (370)
T PRK05600         39 LHNARVLVIG-AGGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQ---------  108 (370)
T ss_pred             hcCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHC---------
Confidence            3567899999 89999999999999995 788887752                   23444444444432         


Q ss_pred             CCCCCceEEEEcCCCChhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEcc
Q 016901          138 IQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (380)
Q Consensus       138 ~~~~~~v~~~~~Dl~d~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS  212 (380)
                        +.-+++.+...++ .+.+.+.++++|+||.|.-               |...-..+-++|.+.++ .+|+.+.
T Consensus       109 --p~v~i~~~~~~i~-~~~~~~~~~~~DlVid~~D---------------n~~~r~~in~~~~~~~i-P~v~~~~  164 (370)
T PRK05600        109 --PDIRVNALRERLT-AENAVELLNGVDLVLDGSD---------------SFATKFLVADAAEITGT-PLVWGTV  164 (370)
T ss_pred             --CCCeeEEeeeecC-HHHHHHHHhCCCEEEECCC---------------CHHHHHHHHHHHHHcCC-CEEEEEE
Confidence              1134555555564 4557788999999999863               33333445567777775 3665554

>PRK08328 hypothetical protein; Provisional

Probab=97.21  E-value=0.0089  Score=54.27  Aligned_cols=108  Identities=20%  Similarity=0.242  Sum_probs=68.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHH--------------------HHHHhhhhcccccccC
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLV--------------------QSVKQMKLDGELANKG  137 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~~~~~~--------------------~~~~~~~~~~~~~~~~  137 (380)
                      ...+|+|.| .|++|+++++.|+..|. ++++++.+.-....+.                    +.++.+          
T Consensus        26 ~~~~VlIiG-~GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~----------   94 (231)
T PRK08328         26 KKAKVAVVG-VGGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERF----------   94 (231)
T ss_pred             hCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHh----------
Confidence            556899999 89999999999999995 6777776432211111                    111111          


Q ss_pred             CCCCCceEEEEcCCCChhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCC
Q 016901          138 IQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT  215 (380)
Q Consensus       138 ~~~~~~v~~~~~Dl~d~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~  215 (380)
                       .+.-.++.+...++ .+.+.+.++++|+||.|.-               |...-..+-++|.+.++ .+|+.++.+.
T Consensus        95 -np~v~v~~~~~~~~-~~~~~~~l~~~D~Vid~~d---------------~~~~r~~l~~~~~~~~i-p~i~g~~~g~  154 (231)
T PRK08328         95 -NSDIKIETFVGRLS-EENIDEVLKGVDVIVDCLD---------------NFETRYLLDDYAHKKGI-PLVHGAVEGT  154 (231)
T ss_pred             -CCCCEEEEEeccCC-HHHHHHHHhcCCEEEECCC---------------CHHHHHHHHHHHHHcCC-CEEEEeeccC
Confidence             11234555555654 4557778899999999863               22223344567888875 4777666544

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=97.19  E-value=0.00087  Score=64.41  Aligned_cols=90  Identities=18%  Similarity=0.201  Sum_probs=57.1

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEE---EEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           82 LAFVAGATGKVGSRTVRELLKLGFRVR---AGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        82 ~vlVtGatG~iG~~lv~~Ll~~G~~V~---~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      +|+|.||||++|..|++.|.+++|.++   .+.+..+....+.                   ..+......|+.     .
T Consensus         1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~~~~-------------------~~~~~~~~~~~~-----~   56 (339)
T TIGR01296         1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAGRKVT-------------------FKGKELEVNEAK-----I   56 (339)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCCeee-------------------eCCeeEEEEeCC-----h
Confidence            489999999999999999999887643   4446543222110                   022445555553     2


Q ss_pred             HHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEcc
Q 016901          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS  212 (380)
                      ..+.++|+||.++|..                -+..++....+.|+ ++|=.|+
T Consensus        57 ~~~~~~D~v~~a~g~~----------------~s~~~a~~~~~~G~-~VID~ss   93 (339)
T TIGR01296        57 ESFEGIDIALFSAGGS----------------VSKEFAPKAAKCGA-IVIDNTS   93 (339)
T ss_pred             HHhcCCCEEEECCCHH----------------HHHHHHHHHHHCCC-EEEECCH
Confidence            3457899999998743                24445555556676 4555555

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=97.16  E-value=0.0039  Score=58.98  Aligned_cols=112  Identities=14%  Similarity=0.114  Sum_probs=76.9

Q ss_pred             EEEEcCCChHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           83 AFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        83 vlVtGatG~iG~~lv~~Ll~~G--~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      |.|.|+ |.+|..++..|+..|  .+++++++++++.......+......          .....+..+  .|    .+.
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~----------~~~~~i~~~--~~----~~~   63 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAF----------LATGTIVRG--GD----YAD   63 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccc----------cCCCeEEEC--CC----HHH
Confidence            468884 899999999999998  68999999988877766655543210          012222221  11    347


Q ss_pred             hcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCE-EEEEc
Q 016901          161 LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNH-FIMVS  211 (380)
Q Consensus       161 ~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r-~V~~S  211 (380)
                      +.++|+||.++|.......+....+..|+.-.+.+.+.+++.+.+- ++.+|
T Consensus        64 l~~aDiVIitag~p~~~~~~R~~l~~~n~~i~~~~~~~i~~~~p~~~viv~s  115 (300)
T cd00300          64 AADADIVVITAGAPRKPGETRLDLINRNAPILRSVITNLKKYGPDAIILVVS  115 (300)
T ss_pred             hCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            8899999999997544333444456778888899999998887554 44444

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=97.16  E-value=0.0019  Score=58.17  Aligned_cols=42  Identities=29%  Similarity=0.368  Sum_probs=37.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQ  122 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~  122 (380)
                      |+|.|.||+|.+|..++..|+++|++|++.+|++++.+.+..
T Consensus         1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~   42 (219)
T TIGR01915         1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAA   42 (219)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHH
Confidence            479999999999999999999999999999999887766554

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins

Probab=97.12  E-value=0.003  Score=59.76  Aligned_cols=113  Identities=14%  Similarity=0.084  Sum_probs=69.0

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHHh
Q 016901           83 AFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPAL  161 (380)
Q Consensus        83 vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a~  161 (380)
                      |.|.|| |.+|..++..|+.+|. +|++++++++.+......+.....         .......+..     ..++ +.+
T Consensus         1 I~IIGa-G~vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~---------~~~~~~~I~~-----t~d~-~~l   64 (300)
T cd01339           1 ISIIGA-GNVGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAP---------ILGSDTKVTG-----TNDY-EDI   64 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhh---------hcCCCeEEEE-----cCCH-HHh
Confidence            568997 9999999999998876 999999987755333221221100         0001122211     0113 357


Q ss_pred             cCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEE-EEEc
Q 016901          162 GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHF-IMVS  211 (380)
Q Consensus       162 ~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~-V~~S  211 (380)
                      +++|+||.++|.......+..+...-|+.-.+.+++.+.+...+.+ |.+|
T Consensus        65 ~dADiVIit~g~p~~~~~~r~e~~~~n~~i~~~i~~~i~~~~p~~~iIv~s  115 (300)
T cd01339          65 AGSDVVVITAGIPRKPGMSRDDLLGTNAKIVKEVAENIKKYAPNAIVIVVT  115 (300)
T ss_pred             CCCCEEEEecCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            8999999999865332222222345577778888888887765544 4444

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.12  E-value=0.0017  Score=62.74  Aligned_cols=38  Identities=34%  Similarity=0.269  Sum_probs=31.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCCchh
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQR  116 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G-~~V~~l~R~~~~  116 (380)
                      ++++|+|+||||++|+.+++.|+++. .+++++.++.+.
T Consensus         2 ~~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~~~   40 (349)
T PRK08664          2 MKLKVGILGATGMVGQRFVQLLANHPWFEVTALAASERS   40 (349)
T ss_pred             CCcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcChhh
Confidence            35789999999999999999999876 488888666543

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=97.08  E-value=0.014  Score=52.96  Aligned_cols=106  Identities=12%  Similarity=0.228  Sum_probs=69.4

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCc-------------------hhHHHHHHHHHhhhhcccccccCCCCC
Q 016901           82 LAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKGIQPV  141 (380)
Q Consensus        82 ~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (380)
                      +|+|.| .|++|..+++.|+..|. ++++++.+.                   .|.+...+.+++++           +.
T Consensus         1 kVlvvG-~GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~n-----------p~   68 (234)
T cd01484           1 KVLLVG-AGGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRN-----------PN   68 (234)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHC-----------CC
Confidence            488998 89999999999999995 677777643                   12222233333222           11


Q ss_pred             CceEEEEcCCCChhcH-HHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCC
Q 016901          142 EMLELVECDLEKRVQI-EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT  215 (380)
Q Consensus       142 ~~v~~~~~Dl~d~~~~-~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~  215 (380)
                      -+++.+..++.+...+ .+.++++|.||.+.-               |+..-..+-+.|...++ .+|..++.|-
T Consensus        69 v~i~~~~~~i~~~~~~~~~f~~~~DvVi~a~D---------------n~~aR~~ln~~c~~~~i-plI~~g~~G~  127 (234)
T cd01484          69 CKVVPYQNKVGPEQDFNDTFFEQFHIIVNALD---------------NIIARRYVNGMLIFLIV-PLIESGTEGF  127 (234)
T ss_pred             CEEEEEeccCChhhhchHHHHhCCCEEEECCC---------------CHHHHHHHHHHHHHcCC-CEEEEcccCC
Confidence            3566677777654433 456789999999752               44555556677887775 5777776543

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=97.07  E-value=0.011  Score=52.32  Aligned_cols=80  Identities=16%  Similarity=0.266  Sum_probs=55.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC---chhH---------------HHHHHHHHhhhhcccccccCC
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRS---VQRA---------------ENLVQSVKQMKLDGELANKGI  138 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~---~~~~---------------~~~~~~~~~~~~~~~~~~~~~  138 (380)
                      ....+|+|.| .|.+|+.++..|++.|. +|++++++   .+.+               +...+.+.+++          
T Consensus        19 L~~~~V~IvG-~GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~in----------   87 (200)
T TIGR02354        19 LEQATVAICG-LGGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEIN----------   87 (200)
T ss_pred             HhCCcEEEEC-cCHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHC----------
Confidence            4567899999 68899999999999997 69998887   3222               22222222221          


Q ss_pred             CCCCceEEEEcCCCChhcHHHHhcCCCEEEEc
Q 016901          139 QPVEMLELVECDLEKRVQIEPALGNASVVICC  170 (380)
Q Consensus       139 ~~~~~v~~~~~Dl~d~~~~~~a~~~~d~Vi~~  170 (380)
                       +.-+++.+..++++ +.+.++++++|.||.+
T Consensus        88 -p~~~i~~~~~~i~~-~~~~~~~~~~DlVi~a  117 (200)
T TIGR02354        88 -PYTEIEAYDEKITE-ENIDKFFKDADIVCEA  117 (200)
T ss_pred             -CCCEEEEeeeeCCH-hHHHHHhcCCCEEEEC
Confidence             11345566666653 5678889999999998

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.06  E-value=0.0035  Score=58.81  Aligned_cols=70  Identities=24%  Similarity=0.290  Sum_probs=52.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      ..+++++|+| .|.+|+.+++.|...|++|++..|++++......                   .+...+     +.+++
T Consensus       149 l~gk~v~IiG-~G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~-------------------~g~~~~-----~~~~l  203 (287)
T TIGR02853       149 IHGSNVMVLG-FGRTGMTIARTFSALGARVFVGARSSADLARITE-------------------MGLIPF-----PLNKL  203 (287)
T ss_pred             CCCCEEEEEc-ChHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-------------------CCCeee-----cHHHH
Confidence            4678999999 5889999999999999999999999865443221                   112211     23456


Q ss_pred             HHHhcCCCEEEEccc
Q 016901          158 EPALGNASVVICCIG  172 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag  172 (380)
                      .+++.++|+||++..
T Consensus       204 ~~~l~~aDiVint~P  218 (287)
T TIGR02853       204 EEKVAEIDIVINTIP  218 (287)
T ss_pred             HHHhccCCEEEECCC
Confidence            778889999999874

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.05  E-value=0.0044  Score=58.11  Aligned_cols=74  Identities=19%  Similarity=0.200  Sum_probs=54.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      .+++|+|.| +|+.|++++..|++.|. +|++++|+.++.+.+.+.+....             +...+..     .+++
T Consensus       126 ~~k~vlIlG-aGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~-------------~~~~~~~-----~~~~  186 (284)
T PRK12549        126 SLERVVQLG-AGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARF-------------PAARATA-----GSDL  186 (284)
T ss_pred             cCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhC-------------CCeEEEe-----ccch
Confidence            567899999 68899999999999996 79999999998888776553210             1222222     1234


Q ss_pred             HHHhcCCCEEEEcc
Q 016901          158 EPALGNASVVICCI  171 (380)
Q Consensus       158 ~~a~~~~d~Vi~~A  171 (380)
                      .+.+.++|.|||+.
T Consensus       187 ~~~~~~aDiVInaT  200 (284)
T PRK12549        187 AAALAAADGLVHAT  200 (284)
T ss_pred             HhhhCCCCEEEECC
Confidence            55678899999994

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=97.04  E-value=0.0055  Score=63.79  Aligned_cols=73  Identities=23%  Similarity=0.257  Sum_probs=62.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      .++|+|.| .|.+|+.+++.|.++|+++++++.++++.+.+.+                   .+..++.||.+|++.+++
T Consensus       400 ~~~vII~G-~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~-------------------~g~~v~~GDat~~~~L~~  459 (621)
T PRK03562        400 QPRVIIAG-FGRFGQIVGRLLLSSGVKMTVLDHDPDHIETLRK-------------------FGMKVFYGDATRMDLLES  459 (621)
T ss_pred             cCcEEEEe-cChHHHHHHHHHHhCCCCEEEEECCHHHHHHHHh-------------------cCCeEEEEeCCCHHHHHh
Confidence            35799999 8999999999999999999999999998777654                   567899999999998876


Q ss_pred             H-hcCCCEEEEccc
Q 016901          160 A-LGNASVVICCIG  172 (380)
Q Consensus       160 a-~~~~d~Vi~~Ag  172 (380)
                      + ++++|.||.+..
T Consensus       460 agi~~A~~vvv~~~  473 (621)
T PRK03562        460 AGAAKAEVLINAID  473 (621)
T ss_pred             cCCCcCCEEEEEeC
Confidence            5 468999998764

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.03  E-value=0.0032  Score=61.26  Aligned_cols=75  Identities=19%  Similarity=0.199  Sum_probs=57.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ...+|+|.|+ |.+|..+++.|...|.+|++++|++++.+.+...+                 ..  .+..+..+.+.+.
T Consensus       166 ~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~-----------------g~--~v~~~~~~~~~l~  225 (370)
T TIGR00518       166 EPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEF-----------------GG--RIHTRYSNAYEIE  225 (370)
T ss_pred             CCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhc-----------------Cc--eeEeccCCHHHHH
Confidence            4467999985 99999999999999999999999987765543211                 11  1234556677788


Q ss_pred             HHhcCCCEEEEcccc
Q 016901          159 PALGNASVVICCIGA  173 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~  173 (380)
                      +.+.++|+||++++.
T Consensus       226 ~~l~~aDvVI~a~~~  240 (370)
T TIGR00518       226 DAVKRADLLIGAVLI  240 (370)
T ss_pred             HHHccCCEEEEcccc
Confidence            899999999999854

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PF08732 HIM1: HIM1; InterPro: IPR014843 HIM1 (high induction of mutagenesis protein 1) plays a role in the control of spontaneous and induced mutagenesis []

Probab=97.02  E-value=0.0017  Score=61.96  Aligned_cols=97  Identities=18%  Similarity=0.291  Sum_probs=68.1

Q ss_pred             HhcCCCEEEEccccCccccCCCCCc-chhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCCCCchhhhchhhHHHHH
Q 016901          160 ALGNASVVICCIGASEKEVFDITGP-YRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLW  234 (380)
Q Consensus       160 a~~~~d~Vi~~Ag~~~~~~~~~~~~-~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~~~~~~~~~~~~~Y~~s  234 (380)
                      .+.+++.+|++.|........-... ..+++.-+..++++..    +.+.+++|.++|.+...       ...+.+|..+
T Consensus       200 ~l~~i~t~is~LGsts~~a~~s~~~~~~IDy~Lnl~laq~f~~~~~~~~~K~~vIvTSfn~~~-------~s~~f~Yfk~  272 (410)
T PF08732_consen  200 SLDDIKTMISTLGSTSAQAKSSKAARHKIDYQLNLDLAQTFANDIKNTGNKKLVIVTSFNNNA-------ISSMFPYFKT  272 (410)
T ss_pred             chhhhhhheecCCCChhhccccccchhhccccccHHHHHHhhhhhccCCCceEEEEEecCcch-------hhhhhhhhHH
Confidence            4567889999998764333222222 2455555566666655    67789999999987632       2345679999


Q ss_pred             HHHHHHHHHHC--C--CCEEEEecCcccCCCcc
Q 016901          235 KRKAEEALIAS--G--LPYTIVRPGGMERPTDA  263 (380)
Q Consensus       235 K~~~E~~l~~~--g--~~~~ivRpg~v~gp~~~  263 (380)
                      |...|+-+...  +  -..+|+|||.+.|.++.
T Consensus       273 K~~LE~dl~~~l~~~l~~lvILRPGplvG~h~~  305 (410)
T PF08732_consen  273 KGELENDLQNLLPPKLKHLVILRPGPLVGEHGS  305 (410)
T ss_pred             HHHHHHHHHhhcccccceEEEecCccccCCCCC
Confidence            99999998853  2  35899999999997654

It is thought to participate in the control of processing of mutational intermediates appearing during error-prone bypass of DNA damage.

>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=96.99  E-value=0.0063  Score=58.44  Aligned_cols=113  Identities=23%  Similarity=0.197  Sum_probs=69.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceE-EEEcC-----CCCh
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLE-LVECD-----LEKR  154 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~D-----l~d~  154 (380)
                      |+|.|.| +|++|.-..--|++.||+|+|++.++++.+.+.+-..-.            +.++++ +++-+     ++=.
T Consensus         1 MkI~viG-tGYVGLv~g~~lA~~GHeVv~vDid~~KV~~ln~g~~PI------------~EpgLe~ll~~~~~~gRl~fT   67 (414)
T COG1004           1 MKITVIG-TGYVGLVTGACLAELGHEVVCVDIDESKVELLNKGISPI------------YEPGLEELLKENLASGRLRFT   67 (414)
T ss_pred             CceEEEC-CchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHhCCCCCC------------cCccHHHHHHhccccCcEEEE
Confidence            6799999 999999999999999999999999999887664311000            001110 00101     2223


Q ss_pred             hcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCC-EEEEEcc
Q 016901          155 VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVSS  212 (380)
Q Consensus       155 ~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~-r~V~~SS  212 (380)
                      .++++++++.|++|-+.|..... .     -..++.....+++...+.-.+ ++|.+=|
T Consensus        68 td~~~a~~~adv~fIavgTP~~~-d-----g~aDl~~V~ava~~i~~~~~~~~vvV~KS  120 (414)
T COG1004          68 TDYEEAVKDADVVFIAVGTPPDE-D-----GSADLSYVEAVAKDIGEILDGKAVVVIKS  120 (414)
T ss_pred             cCHHHHHhcCCEEEEEcCCCCCC-C-----CCccHHHHHHHHHHHHhhcCCCeEEEEcC
Confidence            56788899999999998854322 1     122444455555554443322 4544433

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=96.98  E-value=0.0028  Score=55.44  Aligned_cols=79  Identities=28%  Similarity=0.328  Sum_probs=45.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCC--CceE-----EE-EcCCC
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPV--EMLE-----LV-ECDLE  152 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~-----~~-~~Dl~  152 (380)
                      |+|.|.| .|++|.-++..|+++|++|++++.++++.+.+.+              |..+.  +++.     .+ .+.+.
T Consensus         1 M~I~ViG-lGyvGl~~A~~lA~~G~~V~g~D~~~~~v~~l~~--------------g~~p~~E~~l~~ll~~~~~~~~l~   65 (185)
T PF03721_consen    1 MKIAVIG-LGYVGLPLAAALAEKGHQVIGVDIDEEKVEALNN--------------GELPIYEPGLDELLKENVSAGRLR   65 (185)
T ss_dssp             -EEEEE---STTHHHHHHHHHHTTSEEEEE-S-HHHHHHHHT--------------TSSSS-CTTHHHHHHHHHHTTSEE
T ss_pred             CEEEEEC-CCcchHHHHHHHHhCCCEEEEEeCChHHHHHHhh--------------ccccccccchhhhhccccccccch
Confidence            6899998 9999999999999999999999999987766542              10000  0000     00 01111


Q ss_pred             ChhcHHHHhcCCCEEEEccccC
Q 016901          153 KRVQIEPALGNASVVICCIGAS  174 (380)
Q Consensus       153 d~~~~~~a~~~~d~Vi~~Ag~~  174 (380)
                      -..++.+++.++|++|-|.+..
T Consensus        66 ~t~~~~~ai~~adv~~I~VpTP   87 (185)
T PF03721_consen   66 ATTDIEEAIKDADVVFICVPTP   87 (185)
T ss_dssp             EESEHHHHHHH-SEEEE----E
T ss_pred             hhhhhhhhhhccceEEEecCCC
Confidence            1345667778899999998743

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.98  E-value=0.008  Score=57.22  Aligned_cols=86  Identities=19%  Similarity=0.122  Sum_probs=55.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      .++|.|.| +|-+|+.++..|+..|++|++.+++++..+.....+.+.. .... ..+..  .  ......++-..++++
T Consensus         7 i~~VaVIG-aG~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~-~~~~-~~~~~--~--~~~~~~i~~~~~l~~   79 (321)
T PRK07066          7 IKTFAAIG-SGVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAW-PALE-RQGLA--P--GASPARLRFVATIEA   79 (321)
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHH-HHHH-HcCCC--h--hhHHhhceecCCHHH
Confidence            46899999 7999999999999999999999999877665544433210 0000 00000  0  000111222245778


Q ss_pred             HhcCCCEEEEccc
Q 016901          160 ALGNASVVICCIG  172 (380)
Q Consensus       160 a~~~~d~Vi~~Ag  172 (380)
                      +++++|.||-++.
T Consensus        80 av~~aDlViEavp   92 (321)
T PRK07066         80 CVADADFIQESAP   92 (321)
T ss_pred             HhcCCCEEEECCc
Confidence            8999999999863

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.98  E-value=0.0062  Score=57.19  Aligned_cols=90  Identities=19%  Similarity=0.098  Sum_probs=55.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCc-eEEEEcCCCChhcHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM-LELVECDLEKRVQIE  158 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~Dl~d~~~~~  158 (380)
                      .++|.|.| +|.+|..++..|+++|++|++.+++++..+...+.++.+.-....  .+...... .......++-..+++
T Consensus         3 ~~kIaViG-aG~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~d~~   79 (287)
T PRK08293          3 IKNVTVAG-AGVLGSQIAFQTAFHGFDVTIYDISDEALEKAKERIAKLADRYVR--DLEATKEAPAEAALNRITLTTDLA   79 (287)
T ss_pred             ccEEEEEC-CCHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHHHHHHHH--cCCCChhhhHHHHHcCeEEeCCHH
Confidence            35799998 699999999999999999999999988776665544322100000  00000000 000001111124567


Q ss_pred             HHhcCCCEEEEccc
Q 016901          159 PALGNASVVICCIG  172 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag  172 (380)
                      ++++++|.||.+..
T Consensus        80 ~a~~~aDlVieavp   93 (287)
T PRK08293         80 EAVKDADLVIEAVP   93 (287)
T ss_pred             HHhcCCCEEEEecc
Confidence            78899999999874

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=96.97  E-value=0.017  Score=54.71  Aligned_cols=106  Identities=15%  Similarity=0.229  Sum_probs=70.4

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCc-------------------hhHHHHHHHHHhhhhcccccccCCCCC
Q 016901           82 LAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKGIQPV  141 (380)
Q Consensus        82 ~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (380)
                      +|||.| .|++|.++++.|+..|. ++++++.+.                   .+.+...+.+++++           +.
T Consensus         1 kVlIVG-aGGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lN-----------p~   68 (312)
T cd01489           1 KVLVVG-AGGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFN-----------PN   68 (312)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHC-----------CC
Confidence            489999 69999999999999995 677766533                   23333444444332           11


Q ss_pred             CceEEEEcCCCChhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCC
Q 016901          142 EMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT  215 (380)
Q Consensus       142 ~~v~~~~~Dl~d~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~  215 (380)
                      -+++.+..++.+.....+.++++|+||.+.-               |...-..+-+.|...++ .+|..++.|.
T Consensus        69 v~V~~~~~~i~~~~~~~~f~~~~DvVv~a~D---------------n~~ar~~in~~c~~~~i-p~I~~gt~G~  126 (312)
T cd01489          69 VKIVAYHANIKDPDFNVEFFKQFDLVFNALD---------------NLAARRHVNKMCLAADV-PLIESGTTGF  126 (312)
T ss_pred             CeEEEEeccCCCccchHHHHhcCCEEEECCC---------------CHHHHHHHHHHHHHCCC-CEEEEecCcc
Confidence            3566677788765444577889999998852               34444556677777775 4777666543

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=96.96  E-value=0.012  Score=57.77  Aligned_cols=108  Identities=19%  Similarity=0.239  Sum_probs=69.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCc-------------------hhHHHHHHHHHhhhhcccccccC
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKG  137 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~-------------------~~~~~~~~~~~~~~~~~~~~~~~  137 (380)
                      +...+|+|.| .|++|+.+++.|+..|. ++++++.+.                   .|.+...+.+..++         
T Consensus        40 L~~~~VlviG-~GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~n---------  109 (392)
T PRK07878         40 LKNARVLVIG-AGGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEIN---------  109 (392)
T ss_pred             HhcCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhC---------
Confidence            3556899999 89999999999999995 677766543                   23333333333332         


Q ss_pred             CCCCCceEEEEcCCCChhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCC
Q 016901          138 IQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (380)
Q Consensus       138 ~~~~~~v~~~~~Dl~d~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~  214 (380)
                        +.-+++.+...++. +...+.++++|+||.|..               |...-..+-++|.+.++ .+|+.+..+
T Consensus       110 --p~v~i~~~~~~i~~-~~~~~~~~~~D~Vvd~~d---------------~~~~r~~ln~~~~~~~~-p~v~~~~~g  167 (392)
T PRK07878        110 --PLVNVRLHEFRLDP-SNAVELFSQYDLILDGTD---------------NFATRYLVNDAAVLAGK-PYVWGSIYR  167 (392)
T ss_pred             --CCcEEEEEeccCCh-hHHHHHHhcCCEEEECCC---------------CHHHHHHHHHHHHHcCC-CEEEEEecc
Confidence              11345555666654 456778899999998853               23333335577888775 477766643

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=96.96  E-value=0.0046  Score=50.39  Aligned_cols=92  Identities=20%  Similarity=0.195  Sum_probs=56.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHH-CCCeEEE-EeCCchhHHH-HHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           81 NLAFVAGATGKVGSRTVRELLK-LGFRVRA-GVRSVQRAEN-LVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~-~G~~V~~-l~R~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      |+|.|.|++|.+|+.+++.+.+ .|+++.+ ++|+++.... -...+                 .+..  ...+.-.+++
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~-----------------~~~~--~~~~~v~~~l   61 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGEL-----------------AGIG--PLGVPVTDDL   61 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHH-----------------CTSS--T-SSBEBS-H
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhh-----------------hCcC--CcccccchhH
Confidence            4799999999999999999999 5788665 4565522110 00000                 0000  1111113667


Q ss_pred             HHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEE
Q 016901          158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFI  208 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V  208 (380)
                      ++++..+|+||.+.                +-.++...++.|.++++ ++|
T Consensus        62 ~~~~~~~DVvIDfT----------------~p~~~~~~~~~~~~~g~-~~V   95 (124)
T PF01113_consen   62 EELLEEADVVIDFT----------------NPDAVYDNLEYALKHGV-PLV   95 (124)
T ss_dssp             HHHTTH-SEEEEES-----------------HHHHHHHHHHHHHHT--EEE
T ss_pred             HHhcccCCEEEEcC----------------ChHHhHHHHHHHHhCCC-CEE
Confidence            88888899999985                23457778888888876 344

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=96.95  E-value=0.0033  Score=62.24  Aligned_cols=40  Identities=15%  Similarity=0.065  Sum_probs=36.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL  120 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~  120 (380)
                      .|+|.|.| .|++|..++..|+++|++|+++++++++.+.+
T Consensus         3 ~~kI~VIG-lG~~G~~~A~~La~~G~~V~~~D~~~~~v~~l   42 (415)
T PRK11064          3 FETISVIG-LGYIGLPTAAAFASRQKQVIGVDINQHAVDTI   42 (415)
T ss_pred             ccEEEEEC-cchhhHHHHHHHHhCCCEEEEEeCCHHHHHHH
Confidence            47899998 89999999999999999999999999887764

>PRK07877 hypothetical protein; Provisional

Probab=96.93  E-value=0.012  Score=61.82  Aligned_cols=106  Identities=18%  Similarity=0.190  Sum_probs=72.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCCc------------------hhHHHHHHHHHhhhhcccccccC
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSV------------------QRAENLVQSVKQMKLDGELANKG  137 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~--~V~~l~R~~------------------~~~~~~~~~~~~~~~~~~~~~~~  137 (380)
                      ....+|+|.|. | +|++++..|+..|.  ++++++.+.                  .|.+...+.+...+         
T Consensus       105 L~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~in---------  173 (722)
T PRK07877        105 LGRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELD---------  173 (722)
T ss_pred             HhcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHC---------
Confidence            46678999998 7 99999999999994  777777643                  23333444443332         


Q ss_pred             CCCCCceEEEEcCCCChhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccC
Q 016901          138 IQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL  213 (380)
Q Consensus       138 ~~~~~~v~~~~~Dl~d~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~  213 (380)
                        +.-+++.+...++ .+.+.++++++|+||.|.-               |+..=..+-++|.+.++ .+|+-++.
T Consensus       174 --p~i~v~~~~~~i~-~~n~~~~l~~~DlVvD~~D---------------~~~~R~~ln~~a~~~~i-P~i~~~~~  230 (722)
T PRK07877        174 --PYLPVEVFTDGLT-EDNVDAFLDGLDVVVEECD---------------SLDVKVLLREAARARRI-PVLMATSD  230 (722)
T ss_pred             --CCCEEEEEeccCC-HHHHHHHhcCCCEEEECCC---------------CHHHHHHHHHHHHHcCC-CEEEEcCC
Confidence              1246677777776 5778999999999999962               33333345577888876 46666653

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.91  E-value=0.0069  Score=60.55  Aligned_cols=76  Identities=16%  Similarity=0.163  Sum_probs=50.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      .+++|+|||++| +|..+++.|++.|++|++.+++........+.+..               .++.+..++.  ...  
T Consensus         4 ~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~---------------~g~~~~~~~~--~~~--   63 (447)
T PRK02472          4 QNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLE---------------EGIKVICGSH--PLE--   63 (447)
T ss_pred             CCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHh---------------cCCEEEeCCC--CHH--
Confidence            568899999877 99999999999999999998765432222222221               2344444332  111  


Q ss_pred             HHhc-CCCEEEEccccCc
Q 016901          159 PALG-NASVVICCIGASE  175 (380)
Q Consensus       159 ~a~~-~~d~Vi~~Ag~~~  175 (380)
                       .+. ++|.||+++|...
T Consensus        64 -~~~~~~d~vV~s~gi~~   80 (447)
T PRK02472         64 -LLDEDFDLMVKNPGIPY   80 (447)
T ss_pred             -HhcCcCCEEEECCCCCC
Confidence             233 4899999998653

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=96.90  E-value=0.0077  Score=55.62  Aligned_cols=66  Identities=21%  Similarity=0.227  Sum_probs=45.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHC-CCeEEEEe-CCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKL-GFRVRAGV-RSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~-G~~V~~l~-R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ++|.|+|++|.+|+.+++.+.+. +.+++++. ++++.....                          -..++...++++
T Consensus         2 mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~--------------------------~~~~i~~~~dl~   55 (257)
T PRK00048          2 IKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQ--------------------------GALGVAITDDLE   55 (257)
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccccc--------------------------CCCCccccCCHH
Confidence            68999999999999999888875 68877754 444332110                          112333345677


Q ss_pred             HHhcCCCEEEEccc
Q 016901          159 PALGNASVVICCIG  172 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag  172 (380)
                      +++.++|+||+++.
T Consensus        56 ~ll~~~DvVid~t~   69 (257)
T PRK00048         56 AVLADADVLIDFTT   69 (257)
T ss_pred             HhccCCCEEEECCC
Confidence            77778999998874

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=96.90  E-value=0.0053  Score=59.09  Aligned_cols=27  Identities=26%  Similarity=0.395  Sum_probs=24.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGF  105 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~  105 (380)
                      +.++|.|.||||++|..|++.|.+++|
T Consensus         6 ~~~kVaVvGAtG~vG~eLlrlL~~~~h   32 (344)
T PLN02383          6 NGPSVAIVGVTGAVGQEFLSVLTDRDF   32 (344)
T ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCC
Confidence            456899999999999999999999876

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=96.89  E-value=0.0089  Score=52.07  Aligned_cols=110  Identities=20%  Similarity=0.282  Sum_probs=63.0

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhh-hh---cccccc-cCCCCCCceEEEEcCCCChhc
Q 016901           82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQM-KL---DGELAN-KGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        82 ~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~-~~---~~~~~~-~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      +|.|.|| |.+|+.++..++..|++|++++++++..+...+.+++. .-   .+.... .......++.+       ..+
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~~-------~~d   72 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIERLLDRLVRKGRLSQEEADAALARISF-------TTD   72 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHHHHHHHHHTTTTTHHHHHHHHHTEEE-------ESS
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHHHHhhhhhhccchhhhhhhhhhhccc-------ccC
Confidence            5889995 99999999999999999999999998877666665541 10   000000 00000012221       234


Q ss_pred             HHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCC
Q 016901          157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~  214 (380)
                      ++++. ++|.||-+..-              ++..-+.++....+.-...-|+.|+.+
T Consensus        73 l~~~~-~adlViEai~E--------------~l~~K~~~~~~l~~~~~~~~ilasnTS  115 (180)
T PF02737_consen   73 LEEAV-DADLVIEAIPE--------------DLELKQELFAELDEICPPDTILASNTS  115 (180)
T ss_dssp             GGGGC-TESEEEE-S-S--------------SHHHHHHHHHHHHCCS-TTSEEEE--S
T ss_pred             HHHHh-hhheehhhccc--------------cHHHHHHHHHHHHHHhCCCceEEecCC
Confidence            55566 89999998631              344556666666654333444555433

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.89  E-value=0.0071  Score=56.78  Aligned_cols=45  Identities=16%  Similarity=0.101  Sum_probs=38.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVK  125 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~  125 (380)
                      .++|.|.| +|.+|..++..|+..|++|++++++++..+...+.+.
T Consensus         5 ~~~V~ViG-aG~mG~~iA~~~a~~G~~V~l~d~~~~~~~~~~~~i~   49 (286)
T PRK07819          5 IQRVGVVG-AGQMGAGIAEVCARAGVDVLVFETTEELATAGRNRIE   49 (286)
T ss_pred             ccEEEEEc-ccHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHH
Confidence            35899999 5999999999999999999999999988776555544

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.89  E-value=0.0057  Score=54.23  Aligned_cols=44  Identities=23%  Similarity=0.278  Sum_probs=37.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHH
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLV  121 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~  121 (380)
                      .+.+|+|+|+|. |.+|+++++.|.+.|++|++.++++++...+.
T Consensus        25 ~l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~   68 (200)
T cd01075          25 SLEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAA   68 (200)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence            347789999995 79999999999999999999999877665544

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=96.88  E-value=0.011  Score=56.55  Aligned_cols=42  Identities=24%  Similarity=0.249  Sum_probs=36.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL  120 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~  120 (380)
                      .+.+|+|+||+|.+|..+++.+...|.+|++++++.++.+.+
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~  192 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLL  192 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            567999999999999999988888899999999988776554

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.88  E-value=0.0068  Score=57.15  Aligned_cols=69  Identities=20%  Similarity=0.324  Sum_probs=52.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      .+++++|.| .|.+|+.++..|...|.+|++++|++++......                   .+..++     +.+++.
T Consensus       151 ~g~kvlViG-~G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~-------------------~G~~~~-----~~~~l~  205 (296)
T PRK08306        151 HGSNVLVLG-FGRTGMTLARTLKALGANVTVGARKSAHLARITE-------------------MGLSPF-----HLSELA  205 (296)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-------------------cCCeee-----cHHHHH
Confidence            578999999 5889999999999999999999999765443321                   122222     224567


Q ss_pred             HHhcCCCEEEEccc
Q 016901          159 PALGNASVVICCIG  172 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag  172 (380)
                      +.+.++|+||++++
T Consensus       206 ~~l~~aDiVI~t~p  219 (296)
T PRK08306        206 EEVGKIDIIFNTIP  219 (296)
T ss_pred             HHhCCCCEEEECCC
Confidence            78889999999864

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.86  E-value=0.0057  Score=57.43  Aligned_cols=89  Identities=17%  Similarity=0.200  Sum_probs=55.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      ++|.|.| .|.+|..++..|+++|++|++.+++++..+...+.+......+..  .+.-......-....++-..++.++
T Consensus         2 ~~V~VIG-~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~i~~~~~~~~~   78 (288)
T PRK09260          2 EKLVVVG-AGVMGRGIAYVFAVSGFQTTLVDIKQEQLESAQQEIASIFEQGVA--RGKLTEAARQAALARLSYSLDLKAA   78 (288)
T ss_pred             cEEEEEC-ccHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHH--cCCCCHHHHHHHHhCeEEeCcHHHh
Confidence            4799999 599999999999999999999999998877765543322111000  0000000000000011112456778


Q ss_pred             hcCCCEEEEccc
Q 016901          161 LGNASVVICCIG  172 (380)
Q Consensus       161 ~~~~d~Vi~~Ag  172 (380)
                      ++++|.||-|..
T Consensus        79 ~~~aD~Vi~avp   90 (288)
T PRK09260         79 VADADLVIEAVP   90 (288)
T ss_pred             hcCCCEEEEecc
Confidence            899999999874

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.85  E-value=0.0052  Score=60.59  Aligned_cols=74  Identities=12%  Similarity=0.275  Sum_probs=56.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ..+++|+|.| +|.+|+.++..|.+.| .++++..|+.++...+.+.+                 +...     +...++
T Consensus       179 l~~kkvlviG-aG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~-----------------~~~~-----~~~~~~  235 (414)
T PRK13940        179 ISSKNVLIIG-AGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAF-----------------RNAS-----AHYLSE  235 (414)
T ss_pred             ccCCEEEEEc-CcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHh-----------------cCCe-----EecHHH
Confidence            4678999999 5999999999999999 47999999988877765422                 1111     122355


Q ss_pred             HHHHhcCCCEEEEccccC
Q 016901          157 IEPALGNASVVICCIGAS  174 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag~~  174 (380)
                      +.+++..+|+||+|.+..
T Consensus       236 l~~~l~~aDiVI~aT~a~  253 (414)
T PRK13940        236 LPQLIKKADIIIAAVNVL  253 (414)
T ss_pred             HHHHhccCCEEEECcCCC
Confidence            678889999999998764

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=96.84  E-value=0.0065  Score=56.90  Aligned_cols=77  Identities=21%  Similarity=0.205  Sum_probs=54.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      .+++++|.| +|+.|+.++..|++.|. +|+++.|+.++.+.+.+.+...              ..+  ..  +...+++
T Consensus       124 ~~k~vlvlG-aGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~--------------~~~--~~--~~~~~~~  184 (282)
T TIGR01809       124 AGFRGLVIG-AGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQV--------------GVI--TR--LEGDSGG  184 (282)
T ss_pred             CCceEEEEc-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhc--------------Ccc--ee--ccchhhh
Confidence            567899999 69999999999999995 7999999999888876643210              111  11  1111334


Q ss_pred             HHHhcCCCEEEEccccC
Q 016901          158 EPALGNASVVICCIGAS  174 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag~~  174 (380)
                      ..++.++|+|||+....
T Consensus       185 ~~~~~~~DiVInaTp~g  201 (282)
T TIGR01809       185 LAIEKAAEVLVSTVPAD  201 (282)
T ss_pred             hhcccCCCEEEECCCCC
Confidence            45567899999997643

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=96.81  E-value=0.0051  Score=54.21  Aligned_cols=66  Identities=21%  Similarity=0.203  Sum_probs=46.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCch-hHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ-RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      |++.|. |+|-||+.|+.+|++.||+|++..|+.+ +...+.+.+.                +.        -...+.++
T Consensus         2 ~~~~i~-GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~----------------~~--------i~~~~~~d   56 (211)
T COG2085           2 MIIAII-GTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALG----------------PL--------ITGGSNED   56 (211)
T ss_pred             cEEEEe-ccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhc----------------cc--------cccCChHH
Confidence            445554 5999999999999999999999866554 4444333211                22        11345678


Q ss_pred             HhcCCCEEEEcc
Q 016901          160 ALGNASVVICCI  171 (380)
Q Consensus       160 a~~~~d~Vi~~A  171 (380)
                      +.+.+|+||-..
T Consensus        57 A~~~aDVVvLAV   68 (211)
T COG2085          57 AAALADVVVLAV   68 (211)
T ss_pred             HHhcCCEEEEec
Confidence            888999999865

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=96.80  E-value=0.015  Score=55.70  Aligned_cols=98  Identities=22%  Similarity=0.305  Sum_probs=62.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCCh---h
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR---V  155 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~---~  155 (380)
                      .+.+|||+||+|.+|...++.+...|+.+++.+.+.++.+.+.+    ++             .. ..  .|..+.   +
T Consensus       142 ~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~~----lG-------------Ad-~v--i~y~~~~~~~  201 (326)
T COG0604         142 PGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLKE----LG-------------AD-HV--INYREEDFVE  201 (326)
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHh----cC-------------CC-EE--EcCCcccHHH
Confidence            37899999999999999998888889887777777766553322    11             11 11  122222   3


Q ss_pred             cHHHHhc--CCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCC
Q 016901          156 QIEPALG--NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (380)
Q Consensus       156 ~~~~a~~--~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~  214 (380)
                      .+.++..  ++|+|+.+.|...                ....+.+++..  .+++.+...+
T Consensus       202 ~v~~~t~g~gvDvv~D~vG~~~----------------~~~~l~~l~~~--G~lv~ig~~~  244 (326)
T COG0604         202 QVRELTGGKGVDVVLDTVGGDT----------------FAASLAALAPG--GRLVSIGALS  244 (326)
T ss_pred             HHHHHcCCCCceEEEECCCHHH----------------HHHHHHHhccC--CEEEEEecCC
Confidence            3344443  5999999987421                22234444433  5788888765

>TIGR01771 L-LDH-NAD L-lactate dehydrogenase

Probab=96.78  E-value=0.017  Score=54.61  Aligned_cols=110  Identities=18%  Similarity=0.174  Sum_probs=74.1

Q ss_pred             EEcCCChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHHhc
Q 016901           85 VAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALG  162 (380)
Q Consensus        85 VtGatG~iG~~lv~~Ll~~G~--~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a~~  162 (380)
                      |.| +|.||..++..|+..|.  ++++++++.+++......+......         ...++.+..+|       -+.++
T Consensus         1 iIG-aG~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~---------~~~~~~i~~~~-------~~~~~   63 (299)
T TIGR01771         1 IIG-AGNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASF---------LPTPKKIRSGD-------YSDCK   63 (299)
T ss_pred             CCC-cCHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcc---------cCCCeEEecCC-------HHHHC
Confidence            356 59999999999998883  6999999887666555544432110         00223333222       35788


Q ss_pred             CCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCC-EEEEEc
Q 016901          163 NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVS  211 (380)
Q Consensus       163 ~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~-r~V~~S  211 (380)
                      ++|+||-+||.......+....++.|..-.+.+.+.+.+++.+ .++.+|
T Consensus        64 daDivVitag~~rk~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvs  113 (299)
T TIGR01771        64 DADLVVITAGAPQKPGETRLELVGRNVRIMKSIVPEVVKSGFDGIFLVAT  113 (299)
T ss_pred             CCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeC
Confidence            9999999999754433344455788999999999999888755 445444

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.77  E-value=0.012  Score=51.04  Aligned_cols=70  Identities=21%  Similarity=0.257  Sum_probs=51.4

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ...+++|.|.| .|-||+.+++.|..-|.+|++.+|..........                   ..+        ...+
T Consensus        33 ~l~g~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~-------------------~~~--------~~~~   84 (178)
T PF02826_consen   33 ELRGKTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSPKPEEGADE-------------------FGV--------EYVS   84 (178)
T ss_dssp             -STTSEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHH-------------------TTE--------EESS
T ss_pred             ccCCCEEEEEE-EcCCcCeEeeeeecCCceeEEecccCChhhhccc-------------------ccc--------eeee
Confidence            34789999999 8999999999999999999999999876542111                   112        1346


Q ss_pred             HHHHhcCCCEEEEccccC
Q 016901          157 IEPALGNASVVICCIGAS  174 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag~~  174 (380)
                      +++++..+|+|+.+....
T Consensus        85 l~ell~~aDiv~~~~plt  102 (178)
T PF02826_consen   85 LDELLAQADIVSLHLPLT  102 (178)
T ss_dssp             HHHHHHH-SEEEE-SSSS
T ss_pred             hhhhcchhhhhhhhhccc
Confidence            788899999999987644

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK07411 hypothetical protein; Validated

Probab=96.75  E-value=0.022  Score=55.93  Aligned_cols=107  Identities=20%  Similarity=0.198  Sum_probs=69.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCc-------------------hhHHHHHHHHHhhhhcccccccC
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKG  137 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~-------------------~~~~~~~~~~~~~~~~~~~~~~~  137 (380)
                      ....+|+|.| .|++|..+++.|+..|. ++++++.+.                   .|.+...+.+++++         
T Consensus        36 L~~~~VlivG-~GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~n---------  105 (390)
T PRK07411         36 LKAASVLCIG-TGGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEIN---------  105 (390)
T ss_pred             HhcCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHC---------
Confidence            3556899999 88999999999999995 666666532                   23344444444332         


Q ss_pred             CCCCCceEEEEcCCCChhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccC
Q 016901          138 IQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL  213 (380)
Q Consensus       138 ~~~~~~v~~~~~Dl~d~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~  213 (380)
                        +.-+++.+...++. +...+.+.++|+||.|..               |...-..+-++|.+.++ .+|+.+..
T Consensus       106 --p~v~v~~~~~~~~~-~~~~~~~~~~D~Vvd~~d---------------~~~~r~~ln~~~~~~~~-p~v~~~~~  162 (390)
T PRK07411        106 --PYCQVDLYETRLSS-ENALDILAPYDVVVDGTD---------------NFPTRYLVNDACVLLNK-PNVYGSIF  162 (390)
T ss_pred             --CCCeEEEEecccCH-HhHHHHHhCCCEEEECCC---------------CHHHHHHHHHHHHHcCC-CEEEEEEc
Confidence              11356666666654 456678899999999864               23333335567777764 46665553

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=96.72  E-value=0.0087  Score=59.20  Aligned_cols=40  Identities=25%  Similarity=0.214  Sum_probs=35.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLV  121 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~  121 (380)
                      |+|.|.| .|++|..++..|+++|++|+++++++++.+.+.
T Consensus         1 mkI~vIG-lG~~G~~lA~~La~~G~~V~~~d~~~~~v~~l~   40 (411)
T TIGR03026         1 MKIAVIG-LGYVGLPLAALLADLGHEVTGVDIDQEKVDKLN   40 (411)
T ss_pred             CEEEEEC-CCchhHHHHHHHHhcCCeEEEEECCHHHHHHhh
Confidence            4689998 899999999999999999999999998876654

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>PRK08655 prephenate dehydrogenase; Provisional

Probab=96.71  E-value=0.0059  Score=60.83  Aligned_cols=67  Identities=22%  Similarity=0.240  Sum_probs=49.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      |+|.|.||+|.+|..++..|.+.|++|++.+|+++........                  -++.+       ..+..++
T Consensus         1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~------------------~gv~~-------~~~~~e~   55 (437)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKE------------------LGVEY-------ANDNIDA   55 (437)
T ss_pred             CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHH------------------cCCee-------ccCHHHH
Confidence            4799999999999999999999999999999987664333221                  11211       1234566


Q ss_pred             hcCCCEEEEccc
Q 016901          161 LGNASVVICCIG  172 (380)
Q Consensus       161 ~~~~d~Vi~~Ag  172 (380)
                      +.++|+||-+..
T Consensus        56 ~~~aDvVIlavp   67 (437)
T PRK08655         56 AKDADIVIISVP   67 (437)
T ss_pred             hccCCEEEEecC
Confidence            778898888764

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=96.71  E-value=0.039  Score=49.12  Aligned_cols=71  Identities=23%  Similarity=0.275  Sum_probs=52.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchh-HHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR-AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ..+++|+|.| .|-+|..-++.|++.|++|++++.+... ...+.+                  ..+++++.++...   
T Consensus         7 l~gk~vlVvG-gG~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~------------------~~~i~~~~~~~~~---   64 (205)
T TIGR01470         7 LEGRAVLVVG-GGDVALRKARLLLKAGAQLRVIAEELESELTLLAE------------------QGGITWLARCFDA---   64 (205)
T ss_pred             cCCCeEEEEC-cCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHH------------------cCCEEEEeCCCCH---
Confidence            3678999999 8999999999999999999999876542 222211                  1478888888763   


Q ss_pred             HHHHhcCCCEEEEccc
Q 016901          157 IEPALGNASVVICCIG  172 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag  172 (380)
                        ..+.+++.||-+.+
T Consensus        65 --~dl~~~~lVi~at~   78 (205)
T TIGR01470        65 --DILEGAFLVIAATD   78 (205)
T ss_pred             --HHhCCcEEEEECCC
Confidence              23567888886654

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.70  E-value=0.011  Score=55.53  Aligned_cols=79  Identities=15%  Similarity=0.164  Sum_probs=52.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCch---hHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCCh
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQ---RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~  154 (380)
                      .+++++|.| +|+.+++++..|+..|. +|+++.|+.+   +.+.+.+.+...            ....+.+  .++.+.
T Consensus       123 ~~k~vlvlG-aGGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~------------~~~~~~~--~~~~~~  187 (288)
T PRK12749        123 KGKTMVLLG-AGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNEN------------TDCVVTV--TDLADQ  187 (288)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhc------------cCceEEE--echhhh
Confidence            567999999 57779999999999995 8999999854   555555433210            0011222  233233


Q ss_pred             hcHHHHhcCCCEEEEccc
Q 016901          155 VQIEPALGNASVVICCIG  172 (380)
Q Consensus       155 ~~~~~a~~~~d~Vi~~Ag  172 (380)
                      +.+.+.+.++|.|||+..
T Consensus       188 ~~l~~~~~~aDivINaTp  205 (288)
T PRK12749        188 QAFAEALASADILTNGTK  205 (288)
T ss_pred             hhhhhhcccCCEEEECCC
Confidence            335556778999999864

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.68  E-value=0.0087  Score=56.73  Aligned_cols=42  Identities=33%  Similarity=0.416  Sum_probs=36.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL  120 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~  120 (380)
                      .+.+++|+||+|.+|..+++.+...|.+|+++++++++.+.+
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~  203 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL  203 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Confidence            457899999999999999999999999999999987665443

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.68  E-value=0.0092  Score=55.61  Aligned_cols=107  Identities=17%  Similarity=0.193  Sum_probs=69.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      .+++++|.| +|+.+++++..|++.| .+|+++.|+.++.+++.+.+...+             ..+.  ..++.+.+..
T Consensus       125 ~~~~vlilG-AGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~-------------~~~~--~~~~~~~~~~  188 (283)
T COG0169         125 TGKRVLILG-AGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELG-------------AAVE--AAALADLEGL  188 (283)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc-------------cccc--cccccccccc
Confidence            468899999 7899999999999999 589999999999999887665431             1111  1222222222


Q ss_pred             HHHhcCCCEEEEccccCcccc--C---C------CCCcchhhHHH-HHHHHHHHHHcCCC
Q 016901          158 EPALGNASVVICCIGASEKEV--F---D------ITGPYRIDFQA-TKNLVDAATIAKVN  205 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag~~~~~~--~---~------~~~~~~~nv~g-~~~ll~a~~~~~v~  205 (380)
                      .    ..|.|||+....-...  .   +      ..-.+++++.- -..+++.|++.|.+
T Consensus       189 ~----~~dliINaTp~Gm~~~~~~~~~~~~~l~~~~~v~D~vY~P~~TplL~~A~~~G~~  244 (283)
T COG0169         189 E----EADLLINATPVGMAGPEGDSPVPAELLPKGAIVYDVVYNPLETPLLREARAQGAK  244 (283)
T ss_pred             c----ccCEEEECCCCCCCCCCCCCCCcHHhcCcCCEEEEeccCCCCCHHHHHHHHcCCe
Confidence            1    6899999875331111  0   0      00113444442 34578888888865

>PRK08057 cobalt-precorrin-6x reductase; Reviewed

Probab=96.67  E-value=0.019  Score=52.59  Aligned_cols=95  Identities=13%  Similarity=0.058  Sum_probs=71.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      +++|||.|||+ =|+.|++.|.+.|+.|++.+-......                     ....+.++.|-+.|.+++.+
T Consensus         2 ~~~IlvlgGT~-egr~la~~L~~~g~~v~~Svat~~g~~---------------------~~~~~~v~~G~l~~~~~l~~   59 (248)
T PRK08057          2 MPRILLLGGTS-EARALARALAAAGVDIVLSLAGRTGGP---------------------ADLPGPVRVGGFGGAEGLAA   59 (248)
T ss_pred             CceEEEEechH-HHHHHHHHHHhCCCeEEEEEccCCCCc---------------------ccCCceEEECCCCCHHHHHH
Confidence            56899999996 589999999999999888766543210                     11467788899888899999


Q ss_pred             Hhc--CCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEE
Q 016901          160 ALG--NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIM  209 (380)
Q Consensus       160 a~~--~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~  209 (380)
                      .+.  ++++||...-+           |..  .-+.++.++|++.++..+=|
T Consensus        60 ~l~~~~i~~VIDATHP-----------fA~--~is~~a~~ac~~~~ipyiR~   98 (248)
T PRK08057         60 YLREEGIDLVIDATHP-----------YAA--QISANAAAACRALGIPYLRL   98 (248)
T ss_pred             HHHHCCCCEEEECCCc-----------cHH--HHHHHHHHHHHHhCCcEEEE
Confidence            985  79999997533           232  34788999999998764433

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.66  E-value=0.0094  Score=57.44  Aligned_cols=77  Identities=19%  Similarity=0.272  Sum_probs=51.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      ..++.|||.||+|.+|.++++-+...|..+++.+++.++.+...+    ++               .. ...|..+++-.
T Consensus       156 ~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~----lG---------------Ad-~vvdy~~~~~~  215 (347)
T KOG1198|consen  156 SKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKK----LG---------------AD-EVVDYKDENVV  215 (347)
T ss_pred             CCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHH----cC---------------Cc-EeecCCCHHHH
Confidence            367899999999999999998888889555555666655443322    11               11 13466665444


Q ss_pred             HHHhc----CCCEEEEccccC
Q 016901          158 EPALG----NASVVICCIGAS  174 (380)
Q Consensus       158 ~~a~~----~~d~Vi~~Ag~~  174 (380)
                      +...+    ++|+|++|+|..
T Consensus       216 e~~kk~~~~~~DvVlD~vg~~  236 (347)
T KOG1198|consen  216 ELIKKYTGKGVDVVLDCVGGS  236 (347)
T ss_pred             HHHHhhcCCCccEEEECCCCC
Confidence            43333    599999999864

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.66  E-value=0.0078  Score=51.76  Aligned_cols=37  Identities=19%  Similarity=0.130  Sum_probs=32.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCc
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV  114 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~  114 (380)
                      ..+++|+|.|+++.+|..+++.|.++|.+|+++.|+.
T Consensus        42 l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~   78 (168)
T cd01080          42 LAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT   78 (168)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc
Confidence            4789999999877789999999999999999988864

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=96.66  E-value=0.0079  Score=56.28  Aligned_cols=78  Identities=19%  Similarity=0.243  Sum_probs=53.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      .+++++|.| +|+.|++++-.|++.|. +|+++.|+.++.+.+.+.+....             +.......|   ...+
T Consensus       126 ~~k~vlilG-aGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~-------------~~~~~~~~~---~~~~  188 (283)
T PRK14027        126 KLDSVVQVG-AGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAV-------------GREAVVGVD---ARGI  188 (283)
T ss_pred             CCCeEEEEC-CcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc-------------CcceEEecC---HhHH
Confidence            467899999 59999999999999995 79999999998888766543110             111111122   2223


Q ss_pred             HHHhcCCCEEEEcccc
Q 016901          158 EPALGNASVVICCIGA  173 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag~  173 (380)
                      ...+..+|.|||+...
T Consensus       189 ~~~~~~~divINaTp~  204 (283)
T PRK14027        189 EDVIAAADGVVNATPM  204 (283)
T ss_pred             HHHHhhcCEEEEcCCC
Confidence            3345679999998753

>PRK14851 hypothetical protein; Provisional

Probab=96.65  E-value=0.034  Score=58.20  Aligned_cols=108  Identities=13%  Similarity=0.218  Sum_probs=71.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCc-------------------hhHHHHHHHHHhhhhcccccccC
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKG  137 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~-------------------~~~~~~~~~~~~~~~~~~~~~~~  137 (380)
                      ....+|+|.| .|++|+.+++.|+..|. ++++++.+.                   .|.+.+.+.+.+.+         
T Consensus        41 L~~~~VlIvG-~GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~in---------  110 (679)
T PRK14851         41 LAEAKVAIPG-MGGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSIN---------  110 (679)
T ss_pred             HhcCeEEEEC-cCHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhC---------
Confidence            3567899999 89999999999999995 566655432                   23344444444332         


Q ss_pred             CCCCCceEEEEcCCCChhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEcc
Q 016901          138 IQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (380)
Q Consensus       138 ~~~~~~v~~~~~Dl~d~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS  212 (380)
                        +.-+++.+...++ .+.+.+.++++|+||.+.-..             .+..-..+.+.|.+.++. +|+.+.
T Consensus       111 --P~~~I~~~~~~i~-~~n~~~~l~~~DvVid~~D~~-------------~~~~r~~l~~~c~~~~iP-~i~~g~  168 (679)
T PRK14851        111 --PFLEITPFPAGIN-ADNMDAFLDGVDVVLDGLDFF-------------QFEIRRTLFNMAREKGIP-VITAGP  168 (679)
T ss_pred             --CCCeEEEEecCCC-hHHHHHHHhCCCEEEECCCCC-------------cHHHHHHHHHHHHHCCCC-EEEeec
Confidence              1246777777776 456788899999999875211             122234566788888764 665553

>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated

Probab=96.65  E-value=0.017  Score=58.58  Aligned_cols=83  Identities=14%  Similarity=0.038  Sum_probs=53.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhh--hcccccccCCCCCCceEE-EEcCCCChhc
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMK--LDGELANKGIQPVEMLEL-VECDLEKRVQ  156 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~v~~-~~~Dl~d~~~  156 (380)
                      .|+|.|.| +|.+|..++..|+++|++|++.++++++.+.+.+.+....  +...         ..... ..+.+.-..+
T Consensus         4 i~kIavIG-~G~MG~~iA~~la~~G~~V~v~D~~~~~~~~~~~~~~~~~~~~~~l---------~~~~~~~~g~i~~~~~   73 (495)
T PRK07531          4 IMKAACIG-GGVIGGGWAARFLLAGIDVAVFDPHPEAERIIGEVLANAERAYAML---------TDAPLPPEGRLTFCAS   73 (495)
T ss_pred             cCEEEEEC-cCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHhhh---------ccchhhhhhceEeeCC
Confidence            35799997 9999999999999999999999999987765443222110  0000         00000 0011111245


Q ss_pred             HHHHhcCCCEEEEccc
Q 016901          157 IEPALGNASVVICCIG  172 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag  172 (380)
                      +.++++++|+||-+..
T Consensus        74 ~~ea~~~aD~Vieavp   89 (495)
T PRK07531         74 LAEAVAGADWIQESVP   89 (495)
T ss_pred             HHHHhcCCCEEEEcCc
Confidence            6788899999998763

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.64  E-value=0.0077  Score=59.80  Aligned_cols=73  Identities=25%  Similarity=0.403  Sum_probs=54.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ..+++|+|.| +|.+|..+++.|...|. +|++..|++++...+.+.+                 + .     +..+.++
T Consensus       180 ~~~~~vlViG-aG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~-----------------g-~-----~~~~~~~  235 (423)
T PRK00045        180 LSGKKVLVIG-AGEMGELVAKHLAEKGVRKITVANRTLERAEELAEEF-----------------G-G-----EAIPLDE  235 (423)
T ss_pred             ccCCEEEEEC-chHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc-----------------C-C-----cEeeHHH
Confidence            3668999999 59999999999999996 8999999988776654321                 1 1     1222355


Q ss_pred             HHHHhcCCCEEEEccccC
Q 016901          157 IEPALGNASVVICCIGAS  174 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag~~  174 (380)
                      +.+++.++|+||.+.+..
T Consensus       236 ~~~~l~~aDvVI~aT~s~  253 (423)
T PRK00045        236 LPEALAEADIVISSTGAP  253 (423)
T ss_pred             HHHHhccCCEEEECCCCC
Confidence            667788999999998643

>PRK14852 hypothetical protein; Provisional

Probab=96.62  E-value=0.027  Score=60.50  Aligned_cols=110  Identities=15%  Similarity=0.183  Sum_probs=73.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCc-------------------hhHHHHHHHHHhhhhcccccccC
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKG  137 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~-------------------~~~~~~~~~~~~~~~~~~~~~~~  137 (380)
                      ....+|+|.| .|++|+.+++.|+..|. ++++++.+.                   .|.+.+.+.+.+++         
T Consensus       330 L~~srVlVvG-lGGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~IN---------  399 (989)
T PRK14852        330 LLRSRVAIAG-LGGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVN---------  399 (989)
T ss_pred             HhcCcEEEEC-CcHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHC---------
Confidence            4567899999 89999999999999995 565555432                   24444555554443         


Q ss_pred             CCCCCceEEEEcCCCChhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCC
Q 016901          138 IQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (380)
Q Consensus       138 ~~~~~~v~~~~~Dl~d~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~  214 (380)
                        +.-+++.+...++ .+.+.+.++++|+||.+.-..             .+..-..+.+.|.+.++ .+|+.++.|
T Consensus       400 --P~v~I~~~~~~I~-~en~~~fl~~~DiVVDa~D~~-------------~~~~rr~l~~~c~~~~I-P~I~ag~~G  459 (989)
T PRK14852        400 --PFLDIRSFPEGVA-AETIDAFLKDVDLLVDGIDFF-------------ALDIRRRLFNRALELGI-PVITAGPLG  459 (989)
T ss_pred             --CCCeEEEEecCCC-HHHHHHHhhCCCEEEECCCCc-------------cHHHHHHHHHHHHHcCC-CEEEeeccc
Confidence              1135666666664 466888899999999875211             12233566777888886 477666643

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.61  E-value=0.0068  Score=60.01  Aligned_cols=73  Identities=32%  Similarity=0.450  Sum_probs=54.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ..+++|+|.|+ |.+|..+++.|...| .+|++++|+.++...+.+.+                 . ...+     +.++
T Consensus       178 l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~-----------------g-~~~i-----~~~~  233 (417)
T TIGR01035       178 LKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKEL-----------------G-GEAV-----KFED  233 (417)
T ss_pred             ccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc-----------------C-CeEe-----eHHH
Confidence            35689999995 999999999999999 78999999988766554321                 1 1111     2245


Q ss_pred             HHHHhcCCCEEEEccccC
Q 016901          157 IEPALGNASVVICCIGAS  174 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag~~  174 (380)
                      +.+++.++|+||.+.+..
T Consensus       234 l~~~l~~aDvVi~aT~s~  251 (417)
T TIGR01035       234 LEEYLAEADIVISSTGAP  251 (417)
T ss_pred             HHHHHhhCCEEEECCCCC
Confidence            677888999999997643

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.59  E-value=0.027  Score=53.60  Aligned_cols=96  Identities=18%  Similarity=0.176  Sum_probs=66.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      .+++|+|+|+. ++|...++.+...|.+|++++|++++.+...+    +              ..-.++..  +|.+..+
T Consensus       166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~----l--------------GAd~~i~~--~~~~~~~  224 (339)
T COG1064         166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKK----L--------------GADHVINS--SDSDALE  224 (339)
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHH----h--------------CCcEEEEc--CCchhhH
Confidence            57899999965 99999998888899999999999998766543    1              12222222  2455444


Q ss_pred             HHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccC
Q 016901          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL  213 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~  213 (380)
                      ++-+.+|.+|.+++ . .              .....+++++..|  ++|.++-.
T Consensus       225 ~~~~~~d~ii~tv~-~-~--------------~~~~~l~~l~~~G--~~v~vG~~  261 (339)
T COG1064         225 AVKEIADAIIDTVG-P-A--------------TLEPSLKALRRGG--TLVLVGLP  261 (339)
T ss_pred             HhHhhCcEEEECCC-h-h--------------hHHHHHHHHhcCC--EEEEECCC
Confidence            44445999999987 2 1              1334556666554  68887754

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=96.59  E-value=0.041  Score=52.07  Aligned_cols=99  Identities=17%  Similarity=0.184  Sum_probs=64.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc--
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ--  156 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~--  156 (380)
                      .+.+++|+|+++.+|..+++.+...|++|++++++.++...+..    .               .... ..|..+.+.  
T Consensus       166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~---------------~~~~-~~~~~~~~~~~  225 (342)
T cd08266         166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKE----L---------------GADY-VIDYRKEDFVR  225 (342)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----c---------------CCCe-EEecCChHHHH
Confidence            46789999999999999999999999999999998766544321    1               1111 124444332  


Q ss_pred             -HHHHh--cCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCC
Q 016901          157 -IEPAL--GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT  215 (380)
Q Consensus       157 -~~~a~--~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~  215 (380)
                       +.+..  .++|.+++++|..                .....++.++..  .+++.+++...
T Consensus       226 ~~~~~~~~~~~d~~i~~~g~~----------------~~~~~~~~l~~~--G~~v~~~~~~~  269 (342)
T cd08266         226 EVRELTGKRGVDVVVEHVGAA----------------TWEKSLKSLARG--GRLVTCGATTG  269 (342)
T ss_pred             HHHHHhCCCCCcEEEECCcHH----------------HHHHHHHHhhcC--CEEEEEecCCC
Confidence             22222  3689999998731                122344455443  57998887543

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.58  E-value=0.0084  Score=57.00  Aligned_cols=72  Identities=26%  Similarity=0.360  Sum_probs=54.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      .+++|+|.|+ |.+|..+++.|...| .+|++++|++++...+.+.+                 + ...     .+.+++
T Consensus       177 ~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~-----------------g-~~~-----~~~~~~  232 (311)
T cd05213         177 KGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKEL-----------------G-GNA-----VPLDEL  232 (311)
T ss_pred             cCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc-----------------C-CeE-----EeHHHH
Confidence            5789999995 999999999999876 68999999988776665421                 1 112     123456


Q ss_pred             HHHhcCCCEEEEccccC
Q 016901          158 EPALGNASVVICCIGAS  174 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag~~  174 (380)
                      .+++..+|+||.+.+..
T Consensus       233 ~~~l~~aDvVi~at~~~  249 (311)
T cd05213         233 LELLNEADVVISATGAP  249 (311)
T ss_pred             HHHHhcCCEEEECCCCC
Confidence            77788899999998753

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=96.58  E-value=0.021  Score=57.64  Aligned_cols=42  Identities=26%  Similarity=0.213  Sum_probs=37.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLV  121 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~  121 (380)
                      .+.+|+|+| .|-+|...+..+...|.+|+++++++++.+...
T Consensus       164 pg~kVlViG-aG~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~ae  205 (509)
T PRK09424        164 PPAKVLVIG-AGVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVE  205 (509)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            467999999 899999999999999999999999998776554

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=96.57  E-value=0.01  Score=56.45  Aligned_cols=42  Identities=24%  Similarity=0.231  Sum_probs=36.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL  120 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~  120 (380)
                      .+.+|||+||+|.+|..+++.+...|.+|++++++.++.+.+
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~  179 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL  179 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            567999999999999999988888899999999988776554

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PLN02353 probable UDP-glucose 6-dehydrogenase

Probab=96.55  E-value=0.021  Score=57.29  Aligned_cols=82  Identities=18%  Similarity=0.128  Sum_probs=54.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEE----Ec-CCC
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELV----EC-DLE  152 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G--~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~----~~-Dl~  152 (380)
                      +|+|.|.| .|++|..++-.|+++|  ++|++++.++++.+.+.+.....            ..++++-+    .+ .++
T Consensus         1 ~m~I~ViG-~GyvGl~~A~~lA~~g~g~~V~gvD~~~~~v~~l~~g~~~~------------~e~gl~ell~~~~~~~l~   67 (473)
T PLN02353          1 MVKICCIG-AGYVGGPTMAVIALKCPDIEVVVVDISVPRIDAWNSDQLPI------------YEPGLDEVVKQCRGKNLF   67 (473)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhcCCCCeEEEEECCHHHHHHHHcCCCcc------------CCCCHHHHHHHhhcCCEE
Confidence            36799998 9999999999999985  78999999998877764311000            00011000    01 121


Q ss_pred             ChhcHHHHhcCCCEEEEccccC
Q 016901          153 KRVQIEPALGNASVVICCIGAS  174 (380)
Q Consensus       153 d~~~~~~a~~~~d~Vi~~Ag~~  174 (380)
                      -..++.+++.++|++|-|.+..
T Consensus        68 ~t~~~~~~i~~advi~I~V~TP   89 (473)
T PLN02353         68 FSTDVEKHVAEADIVFVSVNTP   89 (473)
T ss_pred             EEcCHHHHHhcCCEEEEEeCCC
Confidence            1234566788999999998744

>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.53  E-value=0.028  Score=53.32  Aligned_cols=83  Identities=13%  Similarity=0.089  Sum_probs=53.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHh-hhhcccccccCCCCCCceE-EEEcCCCChhcH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQ-MKLDGELANKGIQPVEMLE-LVECDLEKRVQI  157 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~-~~~~Dl~d~~~~  157 (380)
                      .++|.|.| .|.+|..++..|++.|++|++++++.+..+...+.+.. .+....         .... ...+.+.-..+.
T Consensus         4 ~~~I~vIG-aG~mG~~iA~~l~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~i~~~~~~   73 (311)
T PRK06130          4 IQNLAIIG-AGTMGSGIAALFARKGLQVVLIDVMEGALERARGVIERALGVYAP---------LGIASAGMGRIRMEAGL   73 (311)
T ss_pred             ccEEEEEC-CCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHhhh---------cccHHHHhhceEEeCCH
Confidence            46799998 69999999999999999999999998887766553321 110000         0000 000111112345


Q ss_pred             HHHhcCCCEEEEccc
Q 016901          158 EPALGNASVVICCIG  172 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag  172 (380)
                      .++++++|.||-+..
T Consensus        74 ~~~~~~aDlVi~av~   88 (311)
T PRK06130         74 AAAVSGADLVIEAVP   88 (311)
T ss_pred             HHHhccCCEEEEecc
Confidence            667788999999864

>PRK13302 putative L-aspartate dehydrogenase; Provisional

Probab=96.53  E-value=0.029  Score=52.26  Aligned_cols=72  Identities=22%  Similarity=0.312  Sum_probs=48.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHC--CCeEEE-EeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCC
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKL--GFRVRA-GVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK  153 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~--G~~V~~-l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d  153 (380)
                      +|++++|.|.| .|.||+.+++.|.+.  +++|.+ .+|++++.+++.+.+                 . .      ..-
T Consensus         3 ~m~~irIGIIG-~G~IG~~~a~~L~~~~~~~el~aV~dr~~~~a~~~a~~~-----------------g-~------~~~   57 (271)
T PRK13302          3 SRPELRVAIAG-LGAIGKAIAQALDRGLPGLTLSAVAVRDPQRHADFIWGL-----------------R-R------PPP   57 (271)
T ss_pred             CCCeeEEEEEC-ccHHHHHHHHHHHhcCCCeEEEEEECCCHHHHHHHHHhc-----------------C-C------Ccc
Confidence            34568999999 899999999999874  688764 567766655443210                 0 0      001


Q ss_pred             hhcHHHHhcCCCEEEEcccc
Q 016901          154 RVQIEPALGNASVVICCIGA  173 (380)
Q Consensus       154 ~~~~~~a~~~~d~Vi~~Ag~  173 (380)
                      ..++++++.++|+|+-|++.
T Consensus        58 ~~~~eell~~~D~Vvi~tp~   77 (271)
T PRK13302         58 VVPLDQLATHADIVVEAAPA   77 (271)
T ss_pred             cCCHHHHhcCCCEEEECCCc
Confidence            23455667789999999863

>KOG2018 consensus Predicted dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis [Posttranslational modification, protein turnover, chaperones]

Probab=96.49  E-value=0.012  Score=54.51  Aligned_cols=112  Identities=21%  Similarity=0.301  Sum_probs=68.3

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCchhHH-------------------HHHHHHHhhhhcccccc
Q 016901           76 DSKDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAE-------------------NLVQSVKQMKLDGELAN  135 (380)
Q Consensus        76 ~~~~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~~~-------------------~~~~~~~~~~~~~~~~~  135 (380)
                      ....+.-|+|.| .|++|++++..|++.|. ++++++-+.-.+.                   -+.+.+.+.        
T Consensus        70 ~kl~~syVVVVG-~GgVGSwv~nmL~RSG~qKi~iVDfdqVSlsSLNrHs~Atl~DVG~PK~~clkkh~ski--------  140 (430)
T KOG2018|consen   70 EKLTNSYVVVVG-AGGVGSWVANMLLRSGVQKIRIVDFDQVSLSSLNRHSCATLADVGTPKVMCLKKHFSKI--------  140 (430)
T ss_pred             HHhcCcEEEEEe-cCchhHHHHHHHHHhcCceEEEechhhccHhhhhhhhhhhHhhcCCchHHHHHHHHHhh--------
Confidence            345667889998 78999999999999995 5666554332221                   122212111        


Q ss_pred             cCCCCCCceEEEEcCCC----ChhcHHHH-hcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEE
Q 016901          136 KGIQPVEMLELVECDLE----KRVQIEPA-LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMV  210 (380)
Q Consensus       136 ~~~~~~~~v~~~~~Dl~----d~~~~~~a-~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~  210 (380)
                              .-+.+.|..    +.++-+++ +++.|.|+.|.-               |++.-..|+++|-.+|.+   .+
T Consensus       141 --------aPw~eIdar~~l~~~~s~edll~gnPdFvvDciD---------------NidtKVdLL~y~~~~~l~---Vi  194 (430)
T KOG2018|consen  141 --------APWCEIDARNMLWTSSSEEDLLSGNPDFVVDCID---------------NIDTKVDLLEYCYNHGLK---VI  194 (430)
T ss_pred             --------CccceecHHHhhcCCCchhhhhcCCCCeEeEhhh---------------hhhhhhHHHHHHHHcCCc---eE
Confidence                    111222211    22333333 366899998862               667777899999999875   56


Q ss_pred             ccCCCCCCCCch
Q 016901          211 SSLGTNKFGFPA  222 (380)
Q Consensus       211 SS~~~~~~~~~~  222 (380)
                      ||+|+....+|.
T Consensus       195 ss~GaaaksDPT  206 (430)
T KOG2018|consen  195 SSTGAAAKSDPT  206 (430)
T ss_pred             eccCccccCCCc
Confidence            777775544443

>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1

Probab=96.48  E-value=0.04  Score=51.48  Aligned_cols=105  Identities=16%  Similarity=0.232  Sum_probs=68.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCc-------------------hhHHHHHHHHHhhhhcccccccC
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKG  137 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~-------------------~~~~~~~~~~~~~~~~~~~~~~~  137 (380)
                      +...+|||.| .|++|..+++.|+..|. +|++++.+.                   .+.+...+.+++++         
T Consensus        17 L~~s~VLIvG-~gGLG~EiaKnLalaGVg~itI~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~eLN---------   86 (286)
T cd01491          17 LQKSNVLISG-LGGLGVEIAKNLILAGVKSVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAELN---------   86 (286)
T ss_pred             HhcCcEEEEc-CCHHHHHHHHHHHHcCCCeEEEEcCCccchhhcccCccCChHHhCHHHHHHHHHHHHHHC---------
Confidence            3556899999 88999999999999995 677776532                   23334444444433         


Q ss_pred             CCCCCceEEEEcCCCChhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCC
Q 016901          138 IQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT  215 (380)
Q Consensus       138 ~~~~~~v~~~~~Dl~d~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~  215 (380)
                        +.-+++.+..+++     .+.+.++|+||.+..               |......+-++|++.++ .||...+.|.
T Consensus        87 --p~V~V~~~~~~~~-----~~~l~~fdvVV~~~~---------------~~~~~~~in~~c~~~~i-pfI~a~~~G~  141 (286)
T cd01491          87 --PYVPVTVSTGPLT-----TDELLKFQVVVLTDA---------------SLEDQLKINEFCHSPGI-KFISADTRGL  141 (286)
T ss_pred             --CCCEEEEEeccCC-----HHHHhcCCEEEEecC---------------CHHHHHHHHHHHHHcCC-EEEEEecccc
Confidence              1134455554432     356778999988753               23334456688888875 6888877655

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1.

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=96.48  E-value=0.043  Score=43.05  Aligned_cols=88  Identities=20%  Similarity=0.319  Sum_probs=59.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      .++++|||.|| |-+|.+=++.|++.|.+|++++...   ... +                   ..+.+..-++      
T Consensus         5 l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~---~~~-~-------------------~~i~~~~~~~------   54 (103)
T PF13241_consen    5 LKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI---EFS-E-------------------GLIQLIRREF------   54 (103)
T ss_dssp             -TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE---HHH-H-------------------TSCEEEESS-------
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch---hhh-h-------------------hHHHHHhhhH------
Confidence            46789999995 9999999999999999999999986   111 1                   3455554443      


Q ss_pred             HHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEcc
Q 016901          158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS  212 (380)
                      ++.+.+++.||-+.+.               -.-...+.+.|++.++  +|+++.
T Consensus        55 ~~~l~~~~lV~~at~d---------------~~~n~~i~~~a~~~~i--~vn~~D   92 (103)
T PF13241_consen   55 EEDLDGADLVFAATDD---------------PELNEAIYADARARGI--LVNVVD   92 (103)
T ss_dssp             GGGCTTESEEEE-SS----------------HHHHHHHHHHHHHTTS--EEEETT
T ss_pred             HHHHhhheEEEecCCC---------------HHHHHHHHHHHhhCCE--EEEECC
Confidence            3447788988865432               1224557778887765  777665

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=96.45  E-value=0.0099  Score=60.67  Aligned_cols=44  Identities=30%  Similarity=0.339  Sum_probs=38.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQ  122 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~  122 (380)
                      ..+++++|+|+ |++|++++..|++.|++|+++.|+.++.+.+.+
T Consensus       377 ~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~  420 (529)
T PLN02520        377 LAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELAD  420 (529)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence            35689999997 899999999999999999999999887776654

>PRK06153 hypothetical protein; Provisional

Probab=96.44  E-value=0.045  Score=52.92  Aligned_cols=102  Identities=15%  Similarity=0.155  Sum_probs=65.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCc----------------------hhHHHHHHHHHhhhhccccc
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV----------------------QRAENLVQSVKQMKLDGELA  134 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~----------------------~~~~~~~~~~~~~~~~~~~~  134 (380)
                      ....+|+|.| .|++|++++..|++.|. ++++++.+.                      .|.+.+.+.+.++       
T Consensus       174 L~~~~VaIVG-~GG~GS~Va~~LAR~GVgeI~LVD~D~Ve~SNLnRQ~gaf~~~DvGk~~~KVevaa~rl~~i-------  245 (393)
T PRK06153        174 LEGQRIAIIG-LGGTGSYILDLVAKTPVREIHLFDGDDFLQHNAFRSPGAASIEELREAPKKVDYFKSRYSNM-------  245 (393)
T ss_pred             HhhCcEEEEc-CCccHHHHHHHHHHcCCCEEEEECCCEecccccccccccCCHhHcCCcchHHHHHHHHHHHh-------
Confidence            4567999999 89999999999999995 677776542                      1111122222211       


Q ss_pred             ccCCCCCCceEEEEcCCCChhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEc
Q 016901          135 NKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVS  211 (380)
Q Consensus       135 ~~~~~~~~~v~~~~~Dl~d~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~S  211 (380)
                            ..++..+...+ +++.+. .+.++|+||.|.-               |..+-..+.++|.+.++. +|.++
T Consensus       246 ------n~~I~~~~~~I-~~~n~~-~L~~~DiV~dcvD---------------n~~aR~~ln~~a~~~gIP-~Id~G  298 (393)
T PRK06153        246 ------RRGIVPHPEYI-DEDNVD-ELDGFTFVFVCVD---------------KGSSRKLIVDYLEALGIP-FIDVG  298 (393)
T ss_pred             ------CCeEEEEeecC-CHHHHH-HhcCCCEEEEcCC---------------CHHHHHHHHHHHHHcCCC-EEEee
Confidence                  13466666556 445444 6789999999974               334444466778887763 66554

>TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain

Probab=96.42  E-value=0.19  Score=50.35  Aligned_cols=90  Identities=13%  Similarity=0.160  Sum_probs=63.2

Q ss_pred             CCCCeEEEEcCC---ChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCC
Q 016901           78 KDDNLAFVAGAT---GKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLE  152 (380)
Q Consensus        78 ~~~~~vlVtGat---G~iG~~lv~~Ll~~G~--~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~  152 (380)
                      +..++|.|.|++   |-+|..+++.|.+.|+  +|+.+..+....                        .+       +.
T Consensus         5 ~~p~siavvGaS~~~~~~g~~~~~~l~~~gf~g~v~~Vnp~~~~i------------------------~G-------~~   53 (447)
T TIGR02717         5 FNPKSVAVIGASRDPGKVGYAIMKNLIEGGYKGKIYPVNPKAGEI------------------------LG-------VK   53 (447)
T ss_pred             cCCCEEEEEccCCCCCchHHHHHHHHHhCCCCCcEEEECCCCCcc------------------------CC-------cc
Confidence            456789999998   6789999999999997  687765442210                        11       11


Q ss_pred             ChhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCC
Q 016901          153 KRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (380)
Q Consensus       153 d~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~  214 (380)
                      -..+++++-..+|.+|-+...                ..+..+++.|.+.|++.+|.+|+..
T Consensus        54 ~~~sl~~lp~~~Dlavi~vp~----------------~~~~~~l~e~~~~gv~~~vi~s~gf   99 (447)
T TIGR02717        54 AYPSVLEIPDPVDLAVIVVPA----------------KYVPQVVEECGEKGVKGAVVITAGF   99 (447)
T ss_pred             ccCCHHHCCCCCCEEEEecCH----------------HHHHHHHHHHHhcCCCEEEEECCCc
Confidence            123445544678988877642                3466788889999999998888743

Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff.

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.39  E-value=0.012  Score=55.05  Aligned_cols=36  Identities=19%  Similarity=0.145  Sum_probs=32.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS  113 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~  113 (380)
                      ..+++|+|.|++|.+|+.++..|+++|.+|+++.|.
T Consensus       157 l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~  192 (283)
T PRK14192        157 LAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSR  192 (283)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCC
Confidence            478899999999999999999999999999988773

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=96.39  E-value=0.012  Score=45.27  Aligned_cols=67  Identities=28%  Similarity=0.302  Sum_probs=48.9

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCC---CeEEEE-eCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           82 LAFVAGATGKVGSRTVRELLKLG---FRVRAG-VRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        82 ~vlVtGatG~iG~~lv~~Ll~~G---~~V~~l-~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +|.|.| +|-+|.+|++.|+++|   ++|++. .|++++..++.+..                  .+.+..      .+.
T Consensus         1 kI~iIG-~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~------------------~~~~~~------~~~   55 (96)
T PF03807_consen    1 KIGIIG-AGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEY------------------GVQATA------DDN   55 (96)
T ss_dssp             EEEEES-TSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHC------------------TTEEES------EEH
T ss_pred             CEEEEC-CCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhh------------------cccccc------CCh
Confidence            467775 9999999999999999   999955 99999887775421                  122221      245


Q ss_pred             HHHhcCCCEEEEcccc
Q 016901          158 EPALGNASVVICCIGA  173 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag~  173 (380)
                      .++++.+|+||.+.-+
T Consensus        56 ~~~~~~advvilav~p   71 (96)
T PF03807_consen   56 EEAAQEADVVILAVKP   71 (96)
T ss_dssp             HHHHHHTSEEEE-S-G
T ss_pred             HHhhccCCEEEEEECH
Confidence            6777899999998743

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated

Probab=96.38  E-value=0.014  Score=55.66  Aligned_cols=79  Identities=18%  Similarity=0.225  Sum_probs=51.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      |+|.|.| .|.+|..++..|++.|++|.+++|+++..+.+....    ...       ........ ...+.-..+..++
T Consensus         2 mkI~iiG-~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~----~~~-------~~~~~~~~-~~~~~~~~~~~~~   68 (325)
T PRK00094          2 MKIAVLG-AGSWGTALAIVLARNGHDVTLWARDPEQAAEINADR----ENP-------RYLPGIKL-PDNLRATTDLAEA   68 (325)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcC----ccc-------ccCCCCcC-CCCeEEeCCHHHH
Confidence            5799999 699999999999999999999999987766554310    000       00001100 0011112345567


Q ss_pred             hcCCCEEEEccc
Q 016901          161 LGNASVVICCIG  172 (380)
Q Consensus       161 ~~~~d~Vi~~Ag  172 (380)
                      ++++|+||-+..
T Consensus        69 ~~~~D~vi~~v~   80 (325)
T PRK00094         69 LADADLILVAVP   80 (325)
T ss_pred             HhCCCEEEEeCC
Confidence            788999999874

>PLN00203 glutamyl-tRNA reductase

Probab=96.38  E-value=0.009  Score=60.54  Aligned_cols=76  Identities=22%  Similarity=0.287  Sum_probs=56.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ..+++|+|.|+ |.+|..+++.|...|. +|+++.|+.++...+.+.+                 +++.+...+   .++
T Consensus       264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~-----------------~g~~i~~~~---~~d  322 (519)
T PLN00203        264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEF-----------------PDVEIIYKP---LDE  322 (519)
T ss_pred             CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHh-----------------CCCceEeec---Hhh
Confidence            35789999996 9999999999999996 7999999998887765422                 112111122   245


Q ss_pred             HHHHhcCCCEEEEccccC
Q 016901          157 IEPALGNASVVICCIGAS  174 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag~~  174 (380)
                      +.+++.++|+||.+.+..
T Consensus       323 l~~al~~aDVVIsAT~s~  340 (519)
T PLN00203        323 MLACAAEADVVFTSTSSE  340 (519)
T ss_pred             HHHHHhcCCEEEEccCCC
Confidence            667888999999987643

>PRK06849 hypothetical protein; Provisional

Probab=96.38  E-value=0.024  Score=55.56  Aligned_cols=39  Identities=13%  Similarity=0.085  Sum_probs=35.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRA  117 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~  117 (380)
                      ++|+|||||+...+|..+++.|.+.|++|++++.++...
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~   41 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPL   41 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHH
Confidence            568999999999999999999999999999998876543

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.36  E-value=0.092  Score=52.50  Aligned_cols=117  Identities=10%  Similarity=-0.004  Sum_probs=68.6

Q ss_pred             EEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHHhcCC
Q 016901           85 VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNA  164 (380)
Q Consensus        85 VtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a~~~~  164 (380)
                      |+||+|.+|..+++.|...|++|++..+...+....                   ...++.-+..|.+..+..+++.   
T Consensus        43 l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~~-------------------~~~~~~~~~~d~~~~~~~~~l~---  100 (450)
T PRK08261         43 LVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAAG-------------------WGDRFGALVFDATGITDPADLK---  100 (450)
T ss_pred             EEccCchhHHHHHHHHhhCCCeeeecCccccccccC-------------------cCCcccEEEEECCCCCCHHHHH---
Confidence            778889999999999999999999876654321100                   0123333334444433322211   


Q ss_pred             CEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCCchhhhchhhHHHHHHHHHHHHHH-
Q 016901          165 SVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-  243 (380)
Q Consensus       165 d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-  243 (380)
                                            --......+++.+..  ..+||++++......         ...|..+|...+.+++ 
T Consensus       101 ----------------------~~~~~~~~~l~~l~~--~griv~i~s~~~~~~---------~~~~~~akaal~gl~rs  147 (450)
T PRK08261        101 ----------------------ALYEFFHPVLRSLAP--CGRVVVLGRPPEAAA---------DPAAAAAQRALEGFTRS  147 (450)
T ss_pred             ----------------------HHHHHHHHHHHhccC--CCEEEEEccccccCC---------chHHHHHHHHHHHHHHH
Confidence                                  001112223333322  258999998655211         1248888988887765 


Q ss_pred             -----HCCCCEEEEecCc
Q 016901          244 -----ASGLPYTIVRPGG  256 (380)
Q Consensus       244 -----~~g~~~~ivRpg~  256 (380)
                           ..++.+..|.|+.
T Consensus       148 la~E~~~gi~v~~i~~~~  165 (450)
T PRK08261        148 LGKELRRGATAQLVYVAP  165 (450)
T ss_pred             HHHHhhcCCEEEEEecCC
Confidence                 2578888888875

>PF10100 DUF2338: Uncharacterized protein conserved in bacteria (DUF2338); InterPro: IPR016935 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=96.35  E-value=0.14  Score=49.46  Aligned_cols=144  Identities=17%  Similarity=0.106  Sum_probs=89.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCC-C--hh
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLE-K--RV  155 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~-d--~~  155 (380)
                      |.+|||.| ||-++-.++.-|.+.+ .+|=+..|...+.+...+.+.+-+..-.-    .-..+..+.+.|-.. |  -+
T Consensus         1 m~~VLI~G-tGPvAiQLAv~lk~~~~~~vGi~~R~S~rSq~f~~aL~~~~~~~~v----~vqn~~h~~l~G~~~id~~~~   75 (429)
T PF10100_consen    1 MGNVLIVG-TGPVAIQLAVILKKHGNCRVGIVGRESVRSQRFFEALARSDGLFEV----SVQNEQHQALSGECTIDHVFQ   75 (429)
T ss_pred             CCceEEEc-CCHHHHHHHHHHHhccCceeeeecCcchhHHHHHHHHHhCCCEEEE----eecchhhhhhcCeEEhhHhhc
Confidence            35799999 9999999998888776 46878889777777777766542100000    000001111111111 0  13


Q ss_pred             cHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHH---HHcCCCEEEEEccCCCCCCCCchhhhchhhHHH
Q 016901          156 QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAA---TIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVL  232 (380)
Q Consensus       156 ~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~---~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~~Y~  232 (380)
                      +++++.+..|++|-+....                +-..+++..   .-.++|++|.+|..-.                 
T Consensus        76 ~~~~i~g~WdtlILavtaD----------------AY~~VL~ql~~~~L~~vk~iVLvSPtfG-----------------  122 (429)
T PF10100_consen   76 DYEEIEGEWDTLILAVTAD----------------AYLDVLQQLPWEVLKRVKSIVLVSPTFG-----------------  122 (429)
T ss_pred             CHHHhcccccEEEEEechH----------------HHHHHHHhcCHHHHhhCCEEEEECcccc-----------------
Confidence            4455556789988876421                222333332   2346899999997543                 


Q ss_pred             HHHHHHHHHHHHCCCCEEEEecCcccCCCc
Q 016901          233 LWKRKAEEALIASGLPYTIVRPGGMERPTD  262 (380)
Q Consensus       233 ~sK~~~E~~l~~~g~~~~ivRpg~v~gp~~  262 (380)
                       |...++.++++.|..+.||-....||...
T Consensus       123 -S~~lv~~~l~~~~~~~EVISFStY~gdTr  151 (429)
T PF10100_consen  123 -SHLLVKGFLNDLGPDAEVISFSTYYGDTR  151 (429)
T ss_pred             -hHHHHHHHHHhcCCCceEEEeecccccce
Confidence             56677888888888888999988888653

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=96.32  E-value=0.021  Score=52.93  Aligned_cols=81  Identities=20%  Similarity=0.227  Sum_probs=55.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      +..+.+|+|+||+|-+|+-+.+-..-+|++|+.++-+++|..-+.+.+   +++           ..+.+..-|+  .+.
T Consensus       148 pk~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~l---GfD-----------~~idyk~~d~--~~~  211 (340)
T COG2130         148 PKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEEL---GFD-----------AGIDYKAEDF--AQA  211 (340)
T ss_pred             CCCCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhc---CCc-----------eeeecCcccH--HHH
Confidence            346889999999999999777666667999999999999877765422   111           1222222221  234


Q ss_pred             HHHHh-cCCCEEEEcccc
Q 016901          157 IEPAL-GNASVVICCIGA  173 (380)
Q Consensus       157 ~~~a~-~~~d~Vi~~Ag~  173 (380)
                      +.++. +++|+.|.|.|.
T Consensus       212 L~~a~P~GIDvyfeNVGg  229 (340)
T COG2130         212 LKEACPKGIDVYFENVGG  229 (340)
T ss_pred             HHHHCCCCeEEEEEcCCc
Confidence            44444 579999999985

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.32  E-value=0.01  Score=59.72  Aligned_cols=44  Identities=18%  Similarity=0.225  Sum_probs=37.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQ  122 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~  122 (380)
                      ..+++++|+| +|.+|++++..|.+.|++|++..|+.++.+.+.+
T Consensus       330 ~~~k~vlIiG-aGgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~  373 (477)
T PRK09310        330 LNNQHVAIVG-AGGAAKAIATTLARAGAELLIFNRTKAHAEALAS  373 (477)
T ss_pred             cCCCEEEEEc-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            3568999999 5899999999999999999999999877666543

>cd08230 glucose_DH Glucose dehydrogenase

Probab=96.28  E-value=0.052  Score=52.38  Aligned_cols=34  Identities=32%  Similarity=0.329  Sum_probs=29.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS  113 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~  113 (380)
                      .+.+|+|+|+ |.+|...++.+...|.+|++++|+
T Consensus       172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~  205 (355)
T cd08230         172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRR  205 (355)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecC
Confidence            4678999985 999999998888889999999984

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=96.26  E-value=0.022  Score=53.41  Aligned_cols=42  Identities=31%  Similarity=0.332  Sum_probs=36.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL  120 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~  120 (380)
                      .+++++|+|++|.+|..+++.+...|.+|++++++.++.+.+
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  185 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELV  185 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            568999999999999999999999999999999987765544

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=96.25  E-value=0.022  Score=56.16  Aligned_cols=67  Identities=22%  Similarity=0.263  Sum_probs=50.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      ..+++|+|+| .|.||+.++..|...|.+|++..+++.+......                   .++++.        .+
T Consensus       210 l~Gk~VlViG-~G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~-------------------~G~~v~--------~l  261 (425)
T PRK05476        210 IAGKVVVVAG-YGDVGKGCAQRLRGLGARVIVTEVDPICALQAAM-------------------DGFRVM--------TM  261 (425)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHh-------------------cCCEec--------CH
Confidence            3678999999 6999999999999999999999998866433211                   122211        24


Q ss_pred             HHHhcCCCEEEEccc
Q 016901          158 EPALGNASVVICCIG  172 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag  172 (380)
                      +++++++|+||.+.|
T Consensus       262 ~eal~~aDVVI~aTG  276 (425)
T PRK05476        262 EEAAELGDIFVTATG  276 (425)
T ss_pred             HHHHhCCCEEEECCC
Confidence            567789999999875

>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]

Probab=96.24  E-value=0.016  Score=52.98  Aligned_cols=113  Identities=21%  Similarity=0.140  Sum_probs=70.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeE---EEEeCC-chhH-HHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCC
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRV---RAGVRS-VQRA-ENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK  153 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V---~~l~R~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d  153 (380)
                      .+-+|.|.||.|+||+-|...| +....|   .+.+-. ..-. ..+.               .    -+-.......+-
T Consensus        27 ~~~KVAvlGAaGGIGQPLSLLl-K~np~Vs~LaLYDi~~~~GVaaDlS---------------H----I~T~s~V~g~~g   86 (345)
T KOG1494|consen   27 RGLKVAVLGAAGGIGQPLSLLL-KLNPLVSELALYDIANTPGVAADLS---------------H----INTNSSVVGFTG   86 (345)
T ss_pred             CcceEEEEecCCccCccHHHHH-hcCcccceeeeeecccCCccccccc---------------c----cCCCCceeccCC
Confidence            4568999999999999997544 444333   222211 1110 0000               0    011111223333


Q ss_pred             hhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCE-EEEEc
Q 016901          154 RVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNH-FIMVS  211 (380)
Q Consensus       154 ~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r-~V~~S  211 (380)
                      ++.+++++.++|+||--||..........+.|++|..-.+.+..++.+...+. +.++|
T Consensus        87 ~~~L~~al~~advVvIPAGVPRKPGMTRDDLFn~NAgIv~~l~~aia~~cP~A~i~vIs  145 (345)
T KOG1494|consen   87 ADGLENALKGADVVVIPAGVPRKPGMTRDDLFNINAGIVKTLAAAIAKCCPNALILVIS  145 (345)
T ss_pred             hhHHHHHhcCCCEEEecCCCCCCCCCcHHHhhhcchHHHHHHHHHHHhhCccceeEeec
Confidence            57899999999999999997755544555668999988999999988776554 44444

>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.24  E-value=0.032  Score=52.43  Aligned_cols=44  Identities=20%  Similarity=0.178  Sum_probs=37.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQS  123 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~  123 (380)
                      +.++|.|.| +|.+|..++..|+++|++|++.+|+++..+...+.
T Consensus         3 ~~~kI~vIG-aG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~   46 (292)
T PRK07530          3 AIKKVGVIG-AGQMGNGIAHVCALAGYDVLLNDVSADRLEAGLAT   46 (292)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHH
Confidence            446899999 79999999999999999999999998877664443

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.24  E-value=0.055  Score=49.31  Aligned_cols=41  Identities=29%  Similarity=0.262  Sum_probs=35.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL  120 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~  120 (380)
                      .+.+|+|+|+++ +|..+++.+...|.+|+++++++++.+.+
T Consensus       134 ~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~  174 (271)
T cd05188         134 PGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELA  174 (271)
T ss_pred             CCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence            567899999999 99999998888999999999987665443

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>cd08293 PTGR2 Prostaglandin reductase

Probab=96.22  E-value=0.021  Score=54.66  Aligned_cols=41  Identities=29%  Similarity=0.239  Sum_probs=35.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLV  121 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~~~~~~  121 (380)
                      .+|||+||+|.+|..+++.+...|. +|+++++++++.+.+.
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~  197 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLK  197 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH
Confidence            7999999999999999988888898 7999999887765543

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.22  E-value=0.024  Score=53.75  Aligned_cols=43  Identities=26%  Similarity=0.198  Sum_probs=37.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLV  121 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~  121 (380)
                      .+.+|||+||+|.+|..+++.+...|.+|+++++++++.+.+.
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~  185 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLK  185 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence            5679999999999999999888889999999999887765553

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=96.20  E-value=0.046  Score=46.43  Aligned_cols=69  Identities=29%  Similarity=0.356  Sum_probs=46.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      +..+|+++|+| =|.+|+.+++.|...|.+|++...+|-++-+...                   .+++..        .
T Consensus        20 ~l~Gk~vvV~G-YG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~-------------------dGf~v~--------~   71 (162)
T PF00670_consen   20 MLAGKRVVVIG-YGKVGKGIARALRGLGARVTVTEIDPIRALQAAM-------------------DGFEVM--------T   71 (162)
T ss_dssp             --TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHH-------------------TT-EEE---------
T ss_pred             eeCCCEEEEeC-CCcccHHHHHHHhhCCCEEEEEECChHHHHHhhh-------------------cCcEec--------C
Confidence            34788999999 9999999999999999999999998855433221                   344432        3


Q ss_pred             HHHHhcCCCEEEEcccc
Q 016901          157 IEPALGNASVVICCIGA  173 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag~  173 (380)
                      +++++...|++|.+.|.
T Consensus        72 ~~~a~~~adi~vtaTG~   88 (162)
T PF00670_consen   72 LEEALRDADIFVTATGN   88 (162)
T ss_dssp             HHHHTTT-SEEEE-SSS
T ss_pred             HHHHHhhCCEEEECCCC
Confidence            67888999999998774

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PRK15057 UDP-glucose 6-dehydrogenase; Provisional

Probab=96.20  E-value=0.039  Score=54.05  Aligned_cols=40  Identities=23%  Similarity=0.059  Sum_probs=33.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQ  122 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~  122 (380)
                      |+|.|.| .|++|..++..|+ .||+|+++++++++.+.+.+
T Consensus         1 mkI~VIG-lGyvGl~~A~~lA-~G~~VigvD~d~~kv~~l~~   40 (388)
T PRK15057          1 MKITISG-TGYVGLSNGLLIA-QNHEVVALDILPSRVAMLND   40 (388)
T ss_pred             CEEEEEC-CCHHHHHHHHHHH-hCCcEEEEECCHHHHHHHHc
Confidence            4688997 9999999996655 59999999999998877654

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.20  E-value=0.057  Score=51.85  Aligned_cols=41  Identities=22%  Similarity=0.293  Sum_probs=34.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENL  120 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~~~~~  120 (380)
                      .+.+|+|+|+ |.+|...++.+...|. +|+++++++++.+..
T Consensus       169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a  210 (343)
T PRK09880        169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLA  210 (343)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHH
Confidence            4679999985 9999999988888897 688889988776544

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=96.18  E-value=0.013  Score=49.76  Aligned_cols=78  Identities=19%  Similarity=0.256  Sum_probs=51.3

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHHh
Q 016901           82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPAL  161 (380)
Q Consensus        82 ~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a~  161 (380)
                      +|.|.| +|-.|.+++..|.++|++|++..|+++..+.+.+.-...           ...+++..- ..+.=..++++++
T Consensus         1 KI~ViG-aG~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~-----------~~~~~~~l~-~~i~~t~dl~~a~   67 (157)
T PF01210_consen    1 KIAVIG-AGNWGTALAALLADNGHEVTLWGRDEEQIEEINETRQNP-----------KYLPGIKLP-ENIKATTDLEEAL   67 (157)
T ss_dssp             EEEEES-SSHHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSET-----------TTSTTSBEE-TTEEEESSHHHHH
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCC-----------CCCCCcccC-cccccccCHHHHh
Confidence            588999 899999999999999999999999987766655422110           011222111 1111135578899


Q ss_pred             cCCCEEEEccc
Q 016901          162 GNASVVICCIG  172 (380)
Q Consensus       162 ~~~d~Vi~~Ag  172 (380)
                      +++|+||.+..
T Consensus        68 ~~ad~IiiavP   78 (157)
T PF01210_consen   68 EDADIIIIAVP   78 (157)
T ss_dssp             TT-SEEEE-S-
T ss_pred             CcccEEEeccc
Confidence            99999998764

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>COG1023 Gnd Predicted 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism]

Probab=96.18  E-value=0.05  Score=48.77  Aligned_cols=117  Identities=18%  Similarity=0.185  Sum_probs=75.3

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEE---cCCCCh--hc
Q 016901           82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVE---CDLEKR--VQ  156 (380)
Q Consensus        82 ~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~---~Dl~d~--~~  156 (380)
                      .+-+.| -|..|..++++|+++||+|++.++++...+++...-. .+.....+.......++..++-   +|++|.  ++
T Consensus         2 ~iGmiG-LGrMG~n~v~rl~~~ghdvV~yD~n~~av~~~~~~ga-~~a~sl~el~~~L~~pr~vWlMvPag~it~~vi~~   79 (300)
T COG1023           2 QIGMIG-LGRMGANLVRRLLDGGHDVVGYDVNQTAVEELKDEGA-TGAASLDELVAKLSAPRIVWLMVPAGDITDAVIDD   79 (300)
T ss_pred             cceeec-cchhhHHHHHHHHhCCCeEEEEcCCHHHHHHHHhcCC-ccccCHHHHHHhcCCCcEEEEEccCCCchHHHHHH
Confidence            466677 8999999999999999999999999987766554220 0000000001112235555543   567663  56


Q ss_pred             HHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCC
Q 016901          157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT  215 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~  215 (380)
                      +...+..=|+||.- |.             .|+.-+.+-.+.+++.|+ +|+=+.+++.
T Consensus        80 la~~L~~GDivIDG-GN-------------S~y~Ds~rr~~~l~~kgi-~flD~GTSGG  123 (300)
T COG1023          80 LAPLLSAGDIVIDG-GN-------------SNYKDSLRRAKLLAEKGI-HFLDVGTSGG  123 (300)
T ss_pred             HHhhcCCCCEEEEC-Cc-------------cchHHHHHHHHHHHhcCC-eEEeccCCCC
Confidence            66667778999985 21             144445566666777787 7888888755

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=96.17  E-value=0.031  Score=53.13  Aligned_cols=69  Identities=22%  Similarity=0.308  Sum_probs=52.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ...+++|.|.| .|.||+.+++.|..-|++|++.+|.....                        ..+..+    ...++
T Consensus       133 ~l~g~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~~~------------------------~~~~~~----~~~~~  183 (312)
T PRK15469        133 HREDFTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRKSW------------------------PGVQSF----AGREE  183 (312)
T ss_pred             CcCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCC------------------------CCceee----ccccc
Confidence            34678999999 99999999999999999999998865321                        111111    12457


Q ss_pred             HHHHhcCCCEEEEccccC
Q 016901          157 IEPALGNASVVICCIGAS  174 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag~~  174 (380)
                      +++++.++|+|+.+....
T Consensus       184 l~e~l~~aDvvv~~lPlt  201 (312)
T PRK15469        184 LSAFLSQTRVLINLLPNT  201 (312)
T ss_pred             HHHHHhcCCEEEECCCCC
Confidence            899999999999987643

>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=96.17  E-value=0.18  Score=47.65  Aligned_cols=40  Identities=28%  Similarity=0.329  Sum_probs=35.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLV  121 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~  121 (380)
                      |+|.|.| .|-+|..+++.|++.|++|++.+|++++.+.+.
T Consensus         1 m~Ig~IG-lG~MG~~mA~~L~~~g~~v~v~dr~~~~~~~~~   40 (301)
T PRK09599          1 MQLGMIG-LGRMGGNMARRLLRGGHEVVGYDRNPEAVEALA   40 (301)
T ss_pred             CEEEEEc-ccHHHHHHHHHHHHCCCeEEEEECCHHHHHHHH
Confidence            3688998 999999999999999999999999988776653

>PRK10537 voltage-gated potassium channel; Provisional

Probab=96.16  E-value=0.056  Score=52.96  Aligned_cols=71  Identities=15%  Similarity=0.132  Sum_probs=55.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      ..+++|.| .|-+|+.++++|.++|++|++++.+..  +...                   ..++.++.||.+|++.+++
T Consensus       240 k~HvII~G-~g~lg~~v~~~L~~~g~~vvVId~d~~--~~~~-------------------~~g~~vI~GD~td~e~L~~  297 (393)
T PRK10537        240 KDHFIICG-HSPLAINTYLGLRQRGQAVTVIVPLGL--EHRL-------------------PDDADLIPGDSSDSAVLKK  297 (393)
T ss_pred             CCeEEEEC-CChHHHHHHHHHHHCCCCEEEEECchh--hhhc-------------------cCCCcEEEeCCCCHHHHHh
Confidence            46799999 789999999999999999988886522  1111                   1467899999999998886


Q ss_pred             H-hcCCCEEEEccc
Q 016901          160 A-LGNASVVICCIG  172 (380)
Q Consensus       160 a-~~~~d~Vi~~Ag  172 (380)
                      + +++++.||-+..
T Consensus       298 AgI~~A~aVI~~t~  311 (393)
T PRK10537        298 AGAARARAILALRD  311 (393)
T ss_pred             cCcccCCEEEEcCC
Confidence            6 578999997653

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=96.13  E-value=0.024  Score=53.32  Aligned_cols=65  Identities=17%  Similarity=0.212  Sum_probs=49.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      |+|.|.| .|.+|..+++.|++.|++|++.+|++++.+.+.+                   .++..       ..++.++
T Consensus         3 ~~IgviG-~G~mG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~-------------------~g~~~-------~~~~~e~   55 (296)
T PRK11559          3 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVYDRNPEAVAEVIA-------------------AGAET-------ASTAKAV   55 (296)
T ss_pred             ceEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH-------------------CCCee-------cCCHHHH
Confidence            5799998 8999999999999999999999999877655432                   11211       1345567


Q ss_pred             hcCCCEEEEccc
Q 016901          161 LGNASVVICCIG  172 (380)
Q Consensus       161 ~~~~d~Vi~~Ag  172 (380)
                      +.++|+||-+..
T Consensus        56 ~~~~d~vi~~vp   67 (296)
T PRK11559         56 AEQCDVIITMLP   67 (296)
T ss_pred             HhcCCEEEEeCC
Confidence            778899988864

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=96.13  E-value=0.033  Score=54.77  Aligned_cols=67  Identities=25%  Similarity=0.284  Sum_probs=51.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      ..+++|+|.| .|.||..++..+...|.+|+++.+++.+......                   .++..+  +      +
T Consensus       200 l~GktVvViG-~G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~-------------------~G~~~~--~------~  251 (413)
T cd00401         200 IAGKVAVVAG-YGDVGKGCAQSLRGQGARVIVTEVDPICALQAAM-------------------EGYEVM--T------M  251 (413)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECChhhHHHHHh-------------------cCCEEc--c------H
Confidence            3678999999 8999999999999999999999998876554322                   223222  1      2


Q ss_pred             HHHhcCCCEEEEccc
Q 016901          158 EPALGNASVVICCIG  172 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag  172 (380)
                      ++++.++|+||.++|
T Consensus       252 ~e~v~~aDVVI~atG  266 (413)
T cd00401         252 EEAVKEGDIFVTTTG  266 (413)
T ss_pred             HHHHcCCCEEEECCC
Confidence            456788999999876

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.13  E-value=0.027  Score=55.02  Aligned_cols=73  Identities=26%  Similarity=0.403  Sum_probs=60.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ...+++||.| .|-+|.-++++|.++| .+|+++.|+.+++.++.+.+.                       ++....+.
T Consensus       176 L~~~~vlvIG-AGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~-----------------------~~~~~l~e  231 (414)
T COG0373         176 LKDKKVLVIG-AGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG-----------------------AEAVALEE  231 (414)
T ss_pred             cccCeEEEEc-ccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC-----------------------CeeecHHH
Confidence            4778999999 8999999999999999 689999999999988775321                       44444677


Q ss_pred             HHHHhcCCCEEEEccccC
Q 016901          157 IEPALGNASVVICCIGAS  174 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag~~  174 (380)
                      +...+..+|+||.+.|..
T Consensus       232 l~~~l~~~DvVissTsa~  249 (414)
T COG0373         232 LLEALAEADVVISSTSAP  249 (414)
T ss_pred             HHHhhhhCCEEEEecCCC
Confidence            888899999999998754

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=96.12  E-value=0.071  Score=50.43  Aligned_cols=41  Identities=41%  Similarity=0.543  Sum_probs=36.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL  120 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~  120 (380)
                      +.+|+|.|++|.+|..+++.+...|.+|+++++++++.+.+
T Consensus       147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~  187 (326)
T cd08289         147 QGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYL  187 (326)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH
Confidence            56999999999999999998888999999999998776554

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit

Probab=96.11  E-value=0.28  Score=45.90  Aligned_cols=91  Identities=19%  Similarity=0.238  Sum_probs=62.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      +..+|+|-|-||.+|+.+.+.|+..|+++++-+. +.+..                       ..+    ..+.-..++.
T Consensus         5 ~~~~~~~~g~~~~~~~~~~~~~~~~g~~~v~~V~-p~~~~-----------------------~~v----~G~~~y~sv~   56 (286)
T TIGR01019         5 KDTKVIVQGITGSQGSFHTEQMLAYGTNIVGGVT-PGKGG-----------------------TTV----LGLPVFDSVK   56 (286)
T ss_pred             CCCcEEEecCCcHHHHHHHHHHHhCCCCEEEEEC-CCCCc-----------------------cee----cCeeccCCHH
Confidence            3457999999999999999999999988555333 22100                       111    1222234556


Q ss_pred             HHhcC--CCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccC
Q 016901          159 PALGN--ASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL  213 (380)
Q Consensus       159 ~a~~~--~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~  213 (380)
                      ++-+.  +|.+|-+...                ..+..+++.|.+.|++.+|.+|+.
T Consensus        57 dlp~~~~~Dlavi~vpa----------------~~v~~~l~e~~~~Gvk~avIis~G   97 (286)
T TIGR01019        57 EAVEETGANASVIFVPA----------------PFAADAIFEAIDAGIELIVCITEG   97 (286)
T ss_pred             HHhhccCCCEEEEecCH----------------HHHHHHHHHHHHCCCCEEEEECCC
Confidence            65554  7999888653                235668888888999988888864

ATP citrate lyases appear to form an outgroup.

>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A

Probab=96.10  E-value=0.072  Score=42.77  Aligned_cols=85  Identities=19%  Similarity=0.245  Sum_probs=53.8

Q ss_pred             CeEEEEcCC---ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           81 NLAFVAGAT---GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        81 ~~vlVtGat---G~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      |+|.|.|++   +..|..+++.|.++|++|+.+.-+....                        .+..       -..++
T Consensus         1 ksiAVvGaS~~~~~~g~~v~~~l~~~G~~v~~Vnp~~~~i------------------------~G~~-------~y~sl   49 (116)
T PF13380_consen    1 KSIAVVGASDNPGKFGYRVLRNLKAAGYEVYPVNPKGGEI------------------------LGIK-------CYPSL   49 (116)
T ss_dssp             -EEEEET--SSTTSHHHHHHHHHHHTT-EEEEESTTCSEE------------------------TTEE--------BSSG
T ss_pred             CEEEEEcccCCCCChHHHHHHHHHhCCCEEEEECCCceEE------------------------CcEE-------eeccc
Confidence            479999988   7789999999999999999985443211                        1111       12344


Q ss_pred             HHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEcc
Q 016901          158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS  212 (380)
                      .+.=+.+|.++.+...                .-+..+++.|.+.|++.+++.++
T Consensus        50 ~e~p~~iDlavv~~~~----------------~~~~~~v~~~~~~g~~~v~~~~g   88 (116)
T PF13380_consen   50 AEIPEPIDLAVVCVPP----------------DKVPEIVDEAAALGVKAVWLQPG   88 (116)
T ss_dssp             GGCSST-SEEEE-S-H----------------HHHHHHHHHHHHHT-SEEEE-TT
T ss_pred             cCCCCCCCEEEEEcCH----------------HHHHHHHHHHHHcCCCEEEEEcc
Confidence            4422578998887642                34667888898889999999887

>PRK06522 2-dehydropantoate 2-reductase; Reviewed

Probab=96.09  E-value=0.029  Score=52.78  Aligned_cols=40  Identities=20%  Similarity=0.189  Sum_probs=34.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLV  121 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~  121 (380)
                      |+|+|.| +|-+|..++..|.+.|++|++++|+.+..+.+.
T Consensus         1 m~I~IiG-~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~   40 (304)
T PRK06522          1 MKIAILG-AGAIGGLFGAALAQAGHDVTLVARRGAHLDALN   40 (304)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCeEEEEECChHHHHHHH
Confidence            4799999 599999999999999999999999876655443

>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=96.08  E-value=0.048  Score=51.26  Aligned_cols=43  Identities=19%  Similarity=0.264  Sum_probs=37.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSV  124 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~  124 (380)
                      ++|.|.| +|.+|..++..|+++|++|++.+++++..+...+.+
T Consensus         4 ~~I~ViG-aG~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~~i   46 (291)
T PRK06035          4 KVIGVVG-SGVMGQGIAQVFARTGYDVTIVDVSEEILKNAMELI   46 (291)
T ss_pred             cEEEEEC-ccHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHH
Confidence            5799999 799999999999999999999999998876554433

>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms)

Probab=96.05  E-value=0.023  Score=54.68  Aligned_cols=34  Identities=38%  Similarity=0.356  Sum_probs=28.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCCc
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSV  114 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G-~~V~~l~R~~  114 (380)
                      ++|.|+||||++|++|++.|.+++ .+|..+.++.
T Consensus         1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~~~   35 (341)
T TIGR00978         1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVASP   35 (341)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEECh
Confidence            479999999999999999998876 6888775443

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=96.05  E-value=0.023  Score=54.38  Aligned_cols=41  Identities=24%  Similarity=0.163  Sum_probs=36.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLV  121 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~  121 (380)
                      +|+|.|.| +|-+|..++..|++.|++|++..|++++.+.+.
T Consensus         4 ~m~I~iIG-~G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~   44 (328)
T PRK14618          4 GMRVAVLG-AGAWGTALAVLAASKGVPVRLWARRPEFAAALA   44 (328)
T ss_pred             CCeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH
Confidence            46899998 899999999999999999999999887766554

>PRK11880 pyrroline-5-carboxylate reductase; Reviewed

Probab=96.04  E-value=0.076  Score=49.11  Aligned_cols=41  Identities=20%  Similarity=0.166  Sum_probs=35.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCC---CeEEEEeCCchhHHHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLG---FRVRAGVRSVQRAENLV  121 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G---~~V~~l~R~~~~~~~~~  121 (380)
                      +|+|.|.| .|-+|..++..|.+.|   ++|++.+|++++.+.+.
T Consensus         2 mm~I~iIG-~G~mG~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~   45 (267)
T PRK11880          2 MKKIGFIG-GGNMASAIIGGLLASGVPAKDIIVSDPSPEKRAALA   45 (267)
T ss_pred             CCEEEEEe-chHHHHHHHHHHHhCCCCcceEEEEcCCHHHHHHHH
Confidence            46899999 6999999999999998   78999999987765543

>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=96.04  E-value=0.024  Score=53.67  Aligned_cols=35  Identities=17%  Similarity=0.018  Sum_probs=29.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCCc
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSV  114 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G-~~V~~l~R~~  114 (380)
                      +++|.|.||+|+.|..|++.|+.+. .++++.+.+.
T Consensus         2 ~~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~ss~~   37 (349)
T COG0002           2 MIKVGIVGASGYTGLELLRLLAGHPDVELILISSRE   37 (349)
T ss_pred             CceEEEEcCCCCcHHHHHHHHhcCCCeEEEEeechh
Confidence            5689999999999999999999986 5777766554

>TIGR03693 ocin_ThiF_like putative thiazole-containing bacteriocin maturation protein

Probab=96.03  E-value=0.093  Score=53.49  Aligned_cols=107  Identities=19%  Similarity=0.242  Sum_probs=72.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEe--CCchhHH---HHHHHHHhhhhcccccccCCCCCCceEEEEcCCC
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGV--RSVQRAE---NLVQSVKQMKLDGELANKGIQPVEMLELVECDLE  152 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~--R~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~  152 (380)
                      ...+|+|.| .|.+|++++..|+..|. ++++++  +-.+...   ++.+.-+++             .+++.+...|.+
T Consensus       128 R~akVlVlG-~Gg~~s~lv~sL~~sG~~~I~~vd~D~v~SNlnRIgEl~e~A~~~-------------n~~v~v~~i~~~  193 (637)
T TIGR03693       128 RNAKILAAG-SGDFLTKLVRSLIDSGFPRFHAIVTDAEEHALDRIHELAEIAEET-------------DDALLVQEIDFA  193 (637)
T ss_pred             hcccEEEEe-cCchHHHHHHHHHhcCCCcEEEEeccccchhhhHHHHHHHHHHHh-------------CCCCceEeccCC
Confidence            345799999 88999999999999994 676664  3333222   332222221             156766667778


Q ss_pred             ChhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEcc
Q 016901          153 KRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (380)
Q Consensus       153 d~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS  212 (380)
                      ..+++.+.+++.|.||+.+-..             +......+-++|.+.|..-+..+.+
T Consensus       194 ~~~dl~ev~~~~DiVi~vsDdy-------------~~~~Lr~lN~acvkegk~~IPai~~  240 (637)
T TIGR03693       194 EDQHLHEAFEPADWVLYVSDNG-------------DIDDLHALHAFCKEEGKGFIPAICL  240 (637)
T ss_pred             cchhHHHhhcCCcEEEEECCCC-------------ChHHHHHHHHHHHHcCCCeEEEEEc
Confidence            7899999999999999987422             2334666778888887554443333

Members of this protein family are found in a three-gene operon in Bacillus anthracis and related Bacillus species, where the other two genes are clearly identified with maturation of a putative thiazole-containing bacteriocin precursor. While there is no detectable pairwise sequence similarity between members of this family and the proposed cyclodehydratases such as SagC of Streptococcus pyogenes (see family TIGR03603), both families show similarity through PSI-BLAST to ThiF, a protein involved in biosynthesis of the thiazole moiety for thiamine biosynthesis. This family, therefore, may contribute to cyclodehydratase function in heterocycle-containing bacteriocin biosyntheses. In Bacillus licheniformis ATCC 14580, the bacteriocin precursor gene is adjacent to the gene for this protein.

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=96.03  E-value=0.027  Score=53.16  Aligned_cols=41  Identities=20%  Similarity=0.231  Sum_probs=36.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQ  122 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~  122 (380)
                      |+|.|.| .|-+|..++..|+++|++|++.+|++++.+.+.+
T Consensus         1 M~Ig~IG-lG~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~   41 (298)
T TIGR00872         1 MQLGLIG-LGRMGANIVRRLAKRGHDCVGYDHDQDAVKAMKE   41 (298)
T ss_pred             CEEEEEc-chHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence            4689999 7999999999999999999999999988766543

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=96.03  E-value=0.096  Score=50.04  Aligned_cols=97  Identities=22%  Similarity=0.231  Sum_probs=61.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCC--hh
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFR-VRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK--RV  155 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~-V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d--~~  155 (380)
                      .+.+|+|+|+ |.+|..+++.+...|.+ |+++++++++.+...+    ++               +.. ..|..+  .+
T Consensus       163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~----~g---------------a~~-~i~~~~~~~~  221 (339)
T cd08239         163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELAKA----LG---------------ADF-VINSGQDDVQ  221 (339)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----hC---------------CCE-EEcCCcchHH
Confidence            4679999985 99999999988889988 9998888776554322    11               111 122222  23


Q ss_pred             cHHHHhc--CCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccC
Q 016901          156 QIEPALG--NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL  213 (380)
Q Consensus       156 ~~~~a~~--~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~  213 (380)
                      .+.++..  ++|.||.+.|...               .....++.++..  .+++.++..
T Consensus       222 ~~~~~~~~~~~d~vid~~g~~~---------------~~~~~~~~l~~~--G~~v~~g~~  264 (339)
T cd08239         222 EIRELTSGAGADVAIECSGNTA---------------ARRLALEAVRPW--GRLVLVGEG  264 (339)
T ss_pred             HHHHHhCCCCCCEEEECCCCHH---------------HHHHHHHHhhcC--CEEEEEcCC
Confidence            3444443  6999999987421               122344555544  378887753

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=96.02  E-value=0.027  Score=52.68  Aligned_cols=40  Identities=23%  Similarity=0.230  Sum_probs=34.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLV  121 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~  121 (380)
                      |+|.|.| .|.+|..++..|.++|++|++.+|+++..+...
T Consensus         1 m~I~IIG-~G~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~   40 (279)
T PRK07417          1 MKIGIVG-LGLIGGSLGLDLRSLGHTVYGVSRRESTCERAI   40 (279)
T ss_pred             CeEEEEe-ecHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence            4689998 899999999999999999999999987665543

>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt

Probab=96.01  E-value=0.066  Score=49.10  Aligned_cols=95  Identities=19%  Similarity=0.204  Sum_probs=67.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      |+|||.|||+ =|+.|++.|.++|+ |++.+=..-......                 .....+.++.|-+.|.+.+.+.
T Consensus         1 m~ILvlgGTt-E~r~la~~L~~~g~-v~~sv~t~~g~~~~~-----------------~~~~~~~v~~G~lg~~~~l~~~   61 (249)
T PF02571_consen    1 MKILVLGGTT-EGRKLAERLAEAGY-VIVSVATSYGGELLK-----------------PELPGLEVRVGRLGDEEGLAEF   61 (249)
T ss_pred             CEEEEEechH-HHHHHHHHHHhcCC-EEEEEEhhhhHhhhc-----------------cccCCceEEECCCCCHHHHHHH
Confidence            6899999996 48999999999998 655433322111110                 0114678888998888999998


Q ss_pred             h--cCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEE
Q 016901          161 L--GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHF  207 (380)
Q Consensus       161 ~--~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~  207 (380)
                      +  .+++.||...-+           |.  ..-++|+.++|++.|+.-+
T Consensus        62 l~~~~i~~vIDATHP-----------fA--~~is~na~~a~~~~~ipyl   97 (249)
T PF02571_consen   62 LRENGIDAVIDATHP-----------FA--AEISQNAIEACRELGIPYL   97 (249)
T ss_pred             HHhCCCcEEEECCCc-----------hH--HHHHHHHHHHHhhcCcceE
Confidence            8  479999997533           22  2348899999999987633

Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process

>TIGR01724 hmd_rel H2-forming N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase-related protein

Probab=96.01  E-value=0.66  Score=43.86  Aligned_cols=152  Identities=11%  Similarity=0.133  Sum_probs=83.8

Q ss_pred             hHHHHHHHHHHHCCCeEEEEeCCchhHHH-HHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHHhcCCCEEEE
Q 016901           91 KVGSRTVRELLKLGFRVRAGVRSVQRAEN-LVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVIC  169 (380)
Q Consensus        91 ~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a~~~~d~Vi~  169 (380)
                      |-|+.++..|+++||+|++.+|+.++.+. ..+.+..               .++..       .++..++.+++|+||-
T Consensus        30 ~gGspMArnLlkAGheV~V~Drnrsa~e~e~~e~Lae---------------aGA~~-------AaS~aEAAa~ADVVIL   87 (341)
T TIGR01724        30 YGGSRMAIEFAMAGHDVVLAEPNREFMSDDLWKKVED---------------AGVKV-------VSDDKEAAKHGEIHVL   87 (341)
T ss_pred             CCHHHHHHHHHHCCCEEEEEeCChhhhhhhhhHHHHH---------------CCCee-------cCCHHHHHhCCCEEEE
Confidence            56899999999999999999998765421 1111111               12221       2346688899999999


Q ss_pred             ccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCCchhhhchhhHHHHHHHHHHHHHH--HCCC
Q 016901          170 CIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI--ASGL  247 (380)
Q Consensus       170 ~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~--~~g~  247 (380)
                      |......       ..  .+.  ..++..+. .| +-+|-+||...                .......|..+|  ...+
T Consensus        88 ~LPd~aa-------V~--eVl--~GLaa~L~-~G-aIVID~STIsP----------------~t~~~~~e~~l~~~r~d~  138 (341)
T TIGR01724        88 FTPFGKG-------TF--SIA--RTIIEHVP-EN-AVICNTCTVSP----------------VVLYYSLEKILRLKRTDV  138 (341)
T ss_pred             ecCCHHH-------HH--HHH--HHHHhcCC-CC-CEEEECCCCCH----------------HHHHHHHHHHhhcCcccc
Confidence            9753210       00  110  12222221 22 24555665442                234555666666  3678


Q ss_pred             CEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHHHHhC
Q 016901          248 PYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKN  298 (380)
Q Consensus       248 ~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~  298 (380)
                      .++...|+.|=|-.+    ...+.+..... .+--...++..+-++.+++.
T Consensus       139 ~v~s~HP~~vP~~~~----~~~~~~~~~~~-~~~~~A~ee~i~~~~el~~~  184 (341)
T TIGR01724       139 GISSMHPAAVPGTPQ----HGHYVIGGKPT-AGKEMATEEQISKCVELAKS  184 (341)
T ss_pred             CeeccCCCCCCCCCC----Cceeeeccccc-cccccCCHHHHHHHHHHHHH
Confidence            899999999966322    12222222221 11123345555666666654

This model represents a sister clade to the authenticated coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase (HMD) of TIGR01723. Two members, designated HmdII and HmdIII, are found. Members are restricted to methanogens, but the function is unknown.

>PRK08040 putative semialdehyde dehydrogenase; Provisional

Probab=96.00  E-value=0.032  Score=53.40  Aligned_cols=35  Identities=23%  Similarity=0.128  Sum_probs=28.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC---CeEEEEeCC
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLG---FRVRAGVRS  113 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G---~~V~~l~R~  113 (380)
                      +.++|.|.||||++|..+++.|.++.   .++..++.+
T Consensus         3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~   40 (336)
T PRK08040          3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALASE   40 (336)
T ss_pred             CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEcc
Confidence            56789999999999999999999853   466666554

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=95.99  E-value=0.077  Score=51.45  Aligned_cols=97  Identities=16%  Similarity=0.218  Sum_probs=60.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      .+.+|+|.| +|.||..+++.+...|.+|++++.+.++.....+   ++               ++..+ .|..+.+.+.
T Consensus       183 ~g~~VlV~G-~G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~---~~---------------Ga~~v-i~~~~~~~~~  242 (360)
T PLN02586        183 PGKHLGVAG-LGGLGHVAVKIGKAFGLKVTVISSSSNKEDEAIN---RL---------------GADSF-LVSTDPEKMK  242 (360)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHH---hC---------------CCcEE-EcCCCHHHHH
Confidence            467899977 5999999999888889999888777655433221   11               12111 1223334455


Q ss_pred             HHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEcc
Q 016901          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS  212 (380)
                      +...++|+||.+.|..               ......++.++..  .++|.++.
T Consensus       243 ~~~~~~D~vid~~g~~---------------~~~~~~~~~l~~~--G~iv~vG~  279 (360)
T PLN02586        243 AAIGTMDYIIDTVSAV---------------HALGPLLGLLKVN--GKLITLGL  279 (360)
T ss_pred             hhcCCCCEEEECCCCH---------------HHHHHHHHHhcCC--cEEEEeCC
Confidence            5556799999998731               1123345555444  46887764

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=95.98  E-value=0.024  Score=53.24  Aligned_cols=63  Identities=17%  Similarity=0.197  Sum_probs=47.7

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHHhc
Q 016901           83 AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALG  162 (380)
Q Consensus        83 vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a~~  162 (380)
                      |.|.| .|.+|..++..|++.|++|++.+|++++.+.+.+                   .+..       ...+..++++
T Consensus         2 IgvIG-~G~mG~~iA~~l~~~G~~V~~~dr~~~~~~~~~~-------------------~g~~-------~~~~~~~~~~   54 (291)
T TIGR01505         2 VGFIG-LGIMGSPMSINLAKAGYQLHVTTIGPEVADELLA-------------------AGAV-------TAETARQVTE   54 (291)
T ss_pred             EEEEE-ecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH-------------------CCCc-------ccCCHHHHHh
Confidence            77887 8999999999999999999999999877665432                   1111       1234556778


Q ss_pred             CCCEEEEccc
Q 016901          163 NASVVICCIG  172 (380)
Q Consensus       163 ~~d~Vi~~Ag  172 (380)
                      ++|+||-+..
T Consensus        55 ~aDivi~~vp   64 (291)
T TIGR01505        55 QADVIFTMVP   64 (291)
T ss_pred             cCCEEEEecC
Confidence            8888888864

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>PRK12921 2-dehydropantoate 2-reductase; Provisional

Probab=95.98  E-value=0.035  Score=52.36  Aligned_cols=38  Identities=37%  Similarity=0.360  Sum_probs=32.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL  120 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~  120 (380)
                      |+|+|.| +|.+|..++..|.+.|++|.+++| +++.+.+
T Consensus         1 mkI~IiG-~G~iG~~~a~~L~~~g~~V~~~~r-~~~~~~~   38 (305)
T PRK12921          1 MRIAVVG-AGAVGGTFGGRLLEAGRDVTFLVR-PKRAKAL   38 (305)
T ss_pred             CeEEEEC-CCHHHHHHHHHHHHCCCceEEEec-HHHHHHH
Confidence            4799998 899999999999999999999999 6555544

>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional

Probab=95.96  E-value=0.034  Score=52.42  Aligned_cols=40  Identities=28%  Similarity=0.333  Sum_probs=35.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLV  121 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~  121 (380)
                      ++|.|.| .|.+|..++..|+++|++|++.+|++++.+++.
T Consensus         2 ~~Ig~IG-lG~mG~~mA~~l~~~G~~V~v~d~~~~~~~~~~   41 (296)
T PRK15461          2 AAIAFIG-LGQMGSPMASNLLKQGHQLQVFDVNPQAVDALV   41 (296)
T ss_pred             CeEEEEe-eCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHH
Confidence            4788998 999999999999999999999999988776654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	380
1xq6_A	253	X-ray Structure Of Gene Product From Arabidopsis Th		3e-12

>pdb|1XQ6|A Chain A, X-ray Structure Of Gene Product From Arabidopsis Thaliana At5g02240 Length = 253

Iteration: 1
 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 113/259 (43%), Gaps = 26/259 (10%)
Query: 84  FVAGATGKVGSRTVRELLKLG---FRVRAGVRSVQRAENLVQSVKQMK---LDGELANKG 137
            V GA+G+ G + V + LK G   F  +  VRS Q  E +            D +  N  
Sbjct: 8   LVTGASGRTG-QIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPA 66
Query: 138 IQPVEMLELVECDLEK-RVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLV 196
            Q ++ L ++   + K +   +P  G     I   G           P ++D+   KN +
Sbjct: 67  FQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQY---------PEQVDWIGQKNQI 117
Query: 197 DAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGG 256
           DAA +A V H ++V S+G      P   L     +L+WKRKAE+ L  SG PYTI+R GG
Sbjct: 118 DAAKVAGVKHIVVVGSMGGTNPDHPLNKLG-NGNILVWKRKAEQYLADSGTPYTIIRAGG 176
Query: 257 MERPTDAYKE---THNITLSQED--TLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIA 311
           +       +E     +  L Q D  T+    V+ + +  LL   AKN++       E   
Sbjct: 177 LLDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPE--- 233
Query: 312 ETTAPLTPMEELLAKIPSQ 330
            T+ P    + L +++ S+
Sbjct: 234 GTSTPTKDFKALFSQVTSR 252

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	380
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	9e-56
1xq6_A	253	Unknown protein; structural genomics, protein stru	2e-53
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	3e-48
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	6e-48
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	8e-38
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	6e-30
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	2e-23
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	3e-23
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	4e-22
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	2e-21
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	7e-21
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	1e-20
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	9e-20
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	2e-19
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	2e-19
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	3e-19
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	3e-19
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	4e-18
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	9e-18
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	1e-17
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	3e-17
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	4e-17
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	1e-16
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	6e-12
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	3e-08
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	3e-07
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	1e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-06
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	3e-06
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	7e-06
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	1e-05
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	3e-05
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	4e-05
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	3e-04

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score =  182 bits (463), Expect = 9e-56
 Identities = 57/246 (23%), Positives = 97/246 (39%), Gaps = 34/246 (13%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
            V GA GKV    + EL   G    A VR+ ++   L                  +    
Sbjct: 25  LVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPEL------------------RERGA 66

Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
            ++V  +LE+      A  +   V+   G+             ID       +  A    
Sbjct: 67  SDIVVANLEE--DFSHAFASIDAVVFAAGSGPH--TGADKTILIDLWGAIKTIQEAEKRG 122

Query: 204 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDA 263
           +  FIMVSS+GT     P          L+ KR A++ L  S L YTIVRPG +   ++ 
Sbjct: 123 IKRFIMVSSVGTVD---PDQGPMNMRHYLVAKRLADDELKRSSLDYTIVRPGPL---SNE 176

Query: 264 YKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEEL 323
            + T  +T+S   +     ++   VA+++A +   +  +  K  EV+       TP+ ++
Sbjct: 177 -ESTGKVTVSPHFSEITRSITRHDVAKVIAELVDQQH-TIGKTFEVLNGD----TPIAKV 230

Query: 324 LAKIPS 329
           + ++ S
Sbjct: 231 VEQLGS 236

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253

 Score =  176 bits (448), Expect = 2e-53
 Identities = 63/270 (23%), Positives = 103/270 (38%), Gaps = 48/270 (17%)

Query: 84  FVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPV 141
            V GA+G+ G    ++L +    F  +  VRS Q  E +                     
Sbjct: 8   LVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEA----------------- 50

Query: 142 EMLELVECDLEKRVQIEPALGNASVVICCIGAS---------------EKEVFDITGPYR 186
              ++   D+     I PA      ++    A                E    D   P +
Sbjct: 51  ---DVFIGDITDADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQ 107

Query: 187 IDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASG 246
           +D+   KN +DAA +A V H ++V S+G      P   L     +L+WKRKAE+ L  SG
Sbjct: 108 VDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGN-GNILVWKRKAEQYLADSG 166

Query: 247 LPYTIVRPGGMERPTDAYKETHNITLSQEDTLFG---GQVSNLQVAELLACMAKNRSLSY 303
            PYTI+R GG+       +E   + + ++D L       V    VAE+          + 
Sbjct: 167 TPYTIIRAGGLLDKEGGVRE---LLVGKDDELLQTDTKTVPRADVAEVCIQALLFEE-AK 222

Query: 304 CKVVEVI---AETTAPLTPMEELLAKIPSQ 330
            K  ++      T+ P    + L +++ S+
Sbjct: 223 NKAFDLGSKPEGTSTPTKDFKALFSQVTSR 252

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score =  162 bits (411), Expect = 3e-48
 Identities = 50/245 (20%), Positives = 96/245 (39%), Gaps = 38/245 (15%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
           F+ G+TG+VG   ++ L    +++ AG R V++                           
Sbjct: 4   FIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY---------------------NN 42

Query: 144 LELVECDLEKRVQ-IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA 202
           ++ V  D++   + +   L     +I   G+  K         ++D      L+ AA  A
Sbjct: 43  VKAVHFDVDWTPEEMAKQLHGMDAIINVSGSGGK------SLLKVDLYGAVKLMQAAEKA 96

Query: 203 KVNHFIMVSSLGT-NKFGFPAAILNLFWGVLLWKRKAEEALI-ASGLPYTIVRPGGMERP 260
           +V  FI++S++ +     +  A  +      + K  A+  L   + L YTI++PG +   
Sbjct: 97  EVKRFILLSTIFSLQPEKWIGAGFDALKDYYIAKHFADLYLTKETNLDYTIIQPGAL--- 153

Query: 261 TDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPM 320
           T+  + T  I ++ E        +   VA+ +  +      S  KV+ +    TA    +
Sbjct: 154 TEE-EATGLIDINDE---VSASNTIGDVADTIKELVMTDH-SIGKVISMHNGKTAIKEAL 208

Query: 321 EELLA 325
           E LL 
Sbjct: 209 ESLLE 213

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score =  160 bits (408), Expect = 6e-48
 Identities = 35/211 (16%), Positives = 68/211 (32%), Gaps = 32/211 (15%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
            + GATG+ G  T+ + ++ G+ V   VR   R                   +       
Sbjct: 7   AIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLP-------------SEGPRP------ 47

Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
             +V  D+ +   ++  +     VI  +G           P  +  +  +N+V A     
Sbjct: 48  AHVVVGDVLQAADVDKTVAGQDAVIVLLGTRND-----LSPTTVMSEGARNIVAAMKAHG 102

Query: 204 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGG-MERPTD 262
           V+  +  +S        P  +      V     +  + L  SGL Y  V P    ++P  
Sbjct: 103 VDKVVACTSAFL--LWDPTKVPPRLQAVTDDHIRMHKVLRESGLKYVAVMPPHIGDQP-- 158

Query: 263 AYKETHNITLSQEDTLFGGQVSNLQVAELLA 293
               T   T++ +       +S   +   + 
Sbjct: 159 ---LTGAYTVTLDGRGPSRVISKHDLGHFML 186

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236

 Score =  135 bits (341), Expect = 8e-38
 Identities = 43/242 (17%), Positives = 78/242 (32%), Gaps = 41/242 (16%)

Query: 84  FVAGATGKVGSRTVRELL-KLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVE 142
            + GA G++    + +L  K   +     R   +               +          
Sbjct: 27  LILGAGGQIARHVINQLADKQTIKQTLFARQPAKIH-------------KPYPTNS---- 69

Query: 143 MLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA 202
             +++  D+     ++ A+    +V   +               +D QA  +++ A    
Sbjct: 70  --QIIMGDVLNHAALKQAMQGQDIVYANLTGE-----------DLDIQA-NSVIAAMKAC 115

Query: 203 KVNHFIMVSSLGTNK---FGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGG-ME 258
            V   I V SLG        F      +    L   R+A +A+ ASGL YTI+RP    +
Sbjct: 116 DVKRLIFVLSLGIYDEVPGKFVEWNNAVIGEPLKPFRRAADAIEASGLEYTILRPAWLTD 175

Query: 259 RPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLT 318
                Y+ T      + +   G  VS   VA L+  +         + + +    T    
Sbjct: 176 EDIIDYELTS-----RNEPFKGTIVSRKSVAALITDIIDKPEKHIGENIGINQPGTDGDK 230

Query: 319 PM 320
           P 
Sbjct: 231 PF 232

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221

 Score =  113 bits (285), Expect = 6e-30
 Identities = 37/220 (16%), Positives = 66/220 (30%), Gaps = 38/220 (17%)

Query: 84  FVAGATGKVGSRTVRELL-KLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVE 142
            + GA G++       LL      +    R ++                      I   E
Sbjct: 9   TILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPP----------------EIIDHE 52

Query: 143 MLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA 202
            + ++E   +    +E A+ NA VV                          ++V A +  
Sbjct: 53  RVTVIEGSFQNPGXLEQAVTNAEVVFVGAME--------------SGSDMASIVKALSRX 98

Query: 203 KVNHFIMVSSLGTN----KFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGME 258
            +   I VS  G +             NL    +  +R+A   L  S L YTI+R   + 
Sbjct: 99  NIRRVIGVSMAGLSGEFPVALEKWTFDNLPISYVQGERQARNVLRESNLNYTILRLTWL- 157

Query: 259 RPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKN 298
              +  + T    + +       QVS   V + +  +   
Sbjct: 158 --YNDPEXTDYELIPEGAQFNDAQVSREAVVKAIFDILHA 195

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299

 Score = 97.8 bits (244), Expect = 2e-23
 Identities = 40/177 (22%), Positives = 61/177 (34%), Gaps = 29/177 (16%)

Query: 84  FVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVE 142
            V G TG  G    R LL+ G F+VR   R+ ++               EL  +G     
Sbjct: 9   VVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAK-----------ELRLQGA---- 53

Query: 143 MLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA 202
             E+V+ D + +V +E AL  A              +  +     + +  K L D A   
Sbjct: 54  --EVVQGDQDDQVIMELALNGAYATFIVT------NYWESCSQEQEVKQGKLLADLARRL 105

Query: 203 KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGG-ME 258
            +++ +        K          F G    K + EE     G+P T VR     E
Sbjct: 106 GLHYVVYSGLENIKKLTAGRLAAAHFDG----KGEVEEYFRDIGVPMTSVRLPCYFE 158

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score = 95.5 bits (238), Expect = 3e-23
 Identities = 32/185 (17%), Positives = 55/185 (29%), Gaps = 32/185 (17%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
            + GA+G VGS  + E L  GF V A VR  ++ +                       E 
Sbjct: 8   VLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKI--------------------ENEH 47

Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
           L++ + D+    ++      A  VI                Y    +    ++D    A 
Sbjct: 48  LKVKKADVSSLDEVCEVCKGADAVISAFNPGWNN----PDIYDETIKVYLTIIDGVKKAG 103

Query: 204 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRK--------AEEALIASGLPYTIVRPG 255
           VN F+MV   G+        +++                       +    + +    P 
Sbjct: 104 VNRFLMVGGAGSLFIAPGLRLMDSGEVPENILPGVKALGEFYLNFLMKEKEIDWVFFSPA 163

Query: 256 GMERP 260
              RP
Sbjct: 164 ADMRP 168

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308

 Score = 94.6 bits (235), Expect = 4e-22
 Identities = 33/173 (19%), Positives = 56/173 (32%), Gaps = 25/173 (14%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
            + GATG +G    +  L LG         + R      + ++ +L       G      
Sbjct: 8   LLIGATGYIGRHVAKASLDLGHPTFL----LVRESTASSNSEKAQLLESFKASGA----- 58

Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
             +V   ++    +  A+ N  VVI  +G+             +  ++  N++ A     
Sbjct: 59  -NIVHGSIDDHASLVEAVKNVDVVISTVGS-------------LQIESQVNIIKAIKEVG 104

Query: 204 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGG 256
                  S  G +     A        V   K K   A+ A G+PYT V    
Sbjct: 105 TVKRFFPSEFGNDVDNVHAVEPAK--SVFEVKAKVRRAIEAEGIPYTYVSSNC 155

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313

 Score = 92.7 bits (230), Expect = 2e-21
 Identities = 36/171 (21%), Positives = 60/171 (35%), Gaps = 21/171 (12%)

Query: 85  VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML 144
           + G TG +G R V   + LG       R       +V ++ ++++       G       
Sbjct: 9   IVGGTGYIGKRIVNASISLGHPTYVLFR-----PEVVSNIDKVQMLLYFKQLGA------ 57

Query: 145 ELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKV 204
           +L+E  L+   ++  AL    VVI  +           G           LV+A   A  
Sbjct: 58  KLIEASLDDHQRLVDALKQVDVVISALAG---------GVLSHHILEQLKLVEAIKEAGN 108

Query: 205 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPG 255
               + S  G +      A+        + KRK   A+ A+ +PYT V   
Sbjct: 109 IKRFLPSEFGMDPDIMEHALQP-GSITFIDKRKVRRAIEAASIPYTYVSSN 158

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* Length = 352

 Score = 91.8 bits (228), Expect = 7e-21
 Identities = 43/186 (23%), Positives = 65/186 (34%), Gaps = 43/186 (23%)

Query: 77  SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ--RAENLVQSVKQMKLDGELA 134
           ++      V GATG+ G+  +R    +G  VRA V S++   AE L             A
Sbjct: 2   AQQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEEL------------QA 49

Query: 135 NKGIQPVEMLELVECDLEKRVQ-IEPALGNASVVICCIGASEKEVFDITGPYRID-FQAT 192
              +       L +  L   V  ++     A +            F  T     D     
Sbjct: 50  IPNV------TLFQGPLLNNVPLMDTLFEGAHL-----------AFINTTSQAGDEIAIG 92

Query: 193 KNLVDAA-TIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLW--KRKAEEALIASGLPY 249
           K+L DAA     + H+I  SS+         ++   +  V +W  K   E  +   GLP 
Sbjct: 93  KDLADAAKRAGTIQHYI-YSSMP------DHSLYGPWPAVPMWAPKFTVENYVRQLGLPS 145

Query: 250 TIVRPG 255
           T V  G
Sbjct: 146 TFVYAG 151

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287

 Score = 89.6 bits (223), Expect = 1e-20
 Identities = 39/176 (22%), Positives = 65/176 (36%), Gaps = 44/176 (25%)

Query: 85  VAGATGKVGSRTVRELLKL--GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVE 142
           V GATG++G   ++ LLK     ++ A VR+V++A               LA++G+    
Sbjct: 5   VTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKAS-------------TLADQGV---- 47

Query: 143 MLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQAT---KNLVDAA 199
             E+   D  +   ++ A    S +             I+GP+  +        N+V AA
Sbjct: 48  --EVRHGDYNQPESLQKAFAGVSKL-----------LFISGPHYDNTLLIVQHANVVKAA 94

Query: 200 TIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPG 255
             A V H          +   P A               E A+  + +PYT +R  
Sbjct: 95  RDAGVKHIAYTGYAFAEESIIPLA---------HVHLATEYAIRTTNIPYTFLRNA 141

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286

 Score = 87.3 bits (217), Expect = 9e-20
 Identities = 35/174 (20%), Positives = 61/174 (35%), Gaps = 42/174 (24%)

Query: 85  VAGATGKVGSRTVRELLKL--GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVE 142
           + GATG++G   +  L+K     ++ A VR+  +A+              LA +GI    
Sbjct: 4   ITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQ-------------ALAAQGI---- 46

Query: 143 MLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRID-FQATKNLVDAATI 201
              + + D      +  AL     +             I+           +N+++AA  
Sbjct: 47  --TVRQADYGDEAALTSALQGVEKL-----------LLISSSEVGQRAPQHRNVINAAKA 93

Query: 202 AKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPG 255
           A V      S L  +      A             + E+ L  SG+ YT++R G
Sbjct: 94  AGVKFIAYTSLLHADTSPLGLAD---------EHIETEKMLADSGIVYTLLRNG 138

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307

 Score = 86.9 bits (215), Expect = 2e-19
 Identities = 34/172 (19%), Positives = 53/172 (30%), Gaps = 24/172 (13%)

Query: 85  VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML 144
           + G TG +G   V   +K G    A VR    A N      + +L     + G+      
Sbjct: 7   ILGPTGAIGRHIVWASIKAGNPTYALVRKTITAAN---PETKEELIDNYQSLGV------ 57

Query: 145 ELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKV 204
            L+E D+     +  A+    +VIC  G                 +    ++ A   A  
Sbjct: 58  ILLEGDINDHETLVKAIKQVDIVICAAGRL-------------LIEDQVKIIKAIKEAGN 104

Query: 205 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGG 256
                 S  G +     A        V   K      + A G+PYT +    
Sbjct: 105 VKKFFPSEFGLDVDRHDAVEPVRQ--VFEEKASIRRVIEAEGVPYTYLCCHA 154

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score = 84.6 bits (209), Expect = 2e-19
 Identities = 34/223 (15%), Positives = 66/223 (29%), Gaps = 44/223 (19%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
            + GATG+ GSR + E    G  V A VR+  +     + +                   
Sbjct: 4   GIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHKDI------------------- 44

Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
             +++ D+         L + +VV+   G S                +  +L+       
Sbjct: 45  -NILQKDIFDLT--LSDLSDQNVVVDAYGIS-------PDEAEKHVTSLDHLISVLNGTV 94

Query: 204 VNHFIMVSSLGTNKFGFPAAIL--------NLFWGVLLWKRKAEEALIA--SGLPYTIVR 253
               ++V    + +       L          ++     + K  E L +  +   +T + 
Sbjct: 95  SPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQLEHLKSHQAEFSWTYIS 154

Query: 254 PGGM---ERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA 293
           P  M      T  Y+   +  L   D      +S    A  + 
Sbjct: 155 PSAMFEPGERTGDYQIGKDHLLFGSDG--NSFISMEDYAIAVL 195

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289

 Score = 86.2 bits (214), Expect = 3e-19
 Identities = 34/175 (19%), Positives = 55/175 (31%), Gaps = 42/175 (24%)

Query: 85  VAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
           + GATG +G+    + +         GVR+V++               +     +     
Sbjct: 5   LTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVP-------------DDWRGKV----- 46

Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
             + + D   +  +  A      V+  I +     F      RI     +NLV AA  + 
Sbjct: 47  -SVRQLDYFNQESMVEAFKGMDTVVF-IPSIIHPSFK-----RI--PEVENLVYAAKQSG 97

Query: 204 VNHFIMVSSLG---TNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPG 255
           V H I +        N F               +   A   L  SG+ YT VR  
Sbjct: 98  VAHIIFIGYYADQHNNPFHMSP-----------YFGYASRLLSTSGIDYTYVRMA 141

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242

 Score = 84.9 bits (210), Expect = 3e-19
 Identities = 34/176 (19%), Positives = 60/176 (34%), Gaps = 31/176 (17%)

Query: 83  AFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQP 140
            F+ GA+G+ G   ++E+L+ G   +V    R     +                    + 
Sbjct: 21  VFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE-------------------EA 61

Query: 141 VEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAAT 200
            + +     D EK      A     V  CC+G +  +        R+D        + A 
Sbjct: 62  YKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTTRGKAGAEGF-VRVDRDYVLKSAELAK 120

Query: 201 IAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLP-YTIVRPG 255
                HF ++SS G +K        N  +  +  K + E  +       Y++ RPG
Sbjct: 121 AGGCKHFNLLSSKGADKSS------NFLYLQV--KGEVEAKVEELKFDRYSVFRPG 168

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321

 Score = 83.1 bits (205), Expect = 4e-18
 Identities = 33/171 (19%), Positives = 58/171 (33%), Gaps = 25/171 (14%)

Query: 85  VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML 144
           + G TG +G   VR  L              R      +   ++L  E  + G+      
Sbjct: 9   IYGGTGYIGKFMVRASLSFSHPTFI----YARPLTPDSTPSSVQLREEFRSMGV------ 58

Query: 145 ELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKV 204
            ++E ++E+  ++   L    +VI  +                   +  ++++A   A  
Sbjct: 59  TIIEGEMEEHEKMVSVLKQVDIVISALPFP-------------MISSQIHIINAIKAAGN 105

Query: 205 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPG 255
               + S  G  +       L  F  VL  KR    A+ A+ LPYT V   
Sbjct: 106 IKRFLPSDFGCEEDRIKP--LPPFESVLEKKRIIRRAIEAAALPYTYVSAN 154

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score = 82.3 bits (204), Expect = 9e-18
 Identities = 33/188 (17%), Positives = 51/188 (27%), Gaps = 32/188 (17%)

Query: 83  AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVE 142
             V GATG +G    R +   G  +    R   + + L                 ++   
Sbjct: 16  YAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRL---------------AYLE--- 57

Query: 143 MLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA 202
             E    ++     +E AL     VI   G                   T     A   A
Sbjct: 58  -PECRVAEMLDHAGLERALRGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQA 116

Query: 203 KVNHFIMVSS---LGTNKFGFPA---AILNLFWGVLLW----KRKAEEA---LIASGLPY 249
           +V   + V S   +  +  G P       +            K   +E       +GLP 
Sbjct: 117 RVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQARNGLPV 176

Query: 250 TIVRPGGM 257
            I  PG +
Sbjct: 177 VIGIPGMV 184

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318

 Score = 81.5 bits (201), Expect = 1e-17
 Identities = 34/172 (19%), Positives = 58/172 (33%), Gaps = 30/172 (17%)

Query: 85  VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML 144
           + G TG +G+  V+  LKLG       R          S K   LD E  + G       
Sbjct: 16  IFGGTGYIGNHMVKGSLKLGHPTYVFTRP--------NSSKTTLLD-EFQSLGA------ 60

Query: 145 ELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKV 204
            +V+ +L++  ++   +    VVI  +                       +++A  +A  
Sbjct: 61  IIVKGELDEHEKLVELMKKVDVVISALAFP-------------QILDQFKILEAIKVAGN 107

Query: 205 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGG 256
               + S  G          L  F  ++  KR    A+  + +PYT V    
Sbjct: 108 IKRFLPSDFGVE--EDRINALPPFEALIERKRMIRRAIEEANIPYTYVSANC 157

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215

 Score = 78.5 bits (194), Expect = 3e-17
 Identities = 37/186 (19%), Positives = 66/186 (35%), Gaps = 34/186 (18%)

Query: 82  LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPV 141
              +AGATG  G   +  +L      +  V +  R                      + +
Sbjct: 7   RVLLAGATGLTGEHLLDRILSEPTLAK--VIAPAR----------------------KAL 42

Query: 142 EMLELVECDLEKRVQIEPAL-GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAAT 200
                ++  +    ++ P L G+     CC+G + KE         +DF     +   A 
Sbjct: 43  AEHPRLDNPVGPLAELLPQLDGSIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRAL 102

Query: 201 IAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLP-YTIVRPGGMER 259
                H+++VS+LG +           +  V   K + E+AL   G P  TI RP  +  
Sbjct: 103 EMGARHYLVVSALGADAKSS-----IFYNRV---KGELEQALQEQGWPQLTIARPSLLFG 154

Query: 260 PTDAYK 265
           P + ++
Sbjct: 155 PREEFR 160

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346

 Score = 80.8 bits (199), Expect = 4e-17
 Identities = 34/188 (18%), Positives = 59/188 (31%), Gaps = 30/188 (15%)

Query: 71  TPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLD 130
           T +   S    +  +AGATG +G       L          R   R      S  + K+ 
Sbjct: 2   TVSPVPSPKGRVL-IAGATGFIGQFVATASLDAHRPTYILARPGPR------SPSKAKIF 54

Query: 131 GELANKGIQPVEMLELVECDLEKRVQIEPAL--GNASVVICCIGASEKEVFDITGPYRID 188
             L +KG        +V   + ++  +E  L      +V+  +G              I 
Sbjct: 55  KALEDKGA------IIVYGLINEQEAMEKILKEHEIDIVVSTVGGES-----------IL 97

Query: 189 FQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLP 248
            Q    LV A          + S  G +        +     +   KR+  + +  SG+P
Sbjct: 98  DQ--IALVKAMKAVGTIKRFLPSEFGHDVNRADP--VEPGLNMYREKRRVRQLVEESGIP 153

Query: 249 YTIVRPGG 256
           +T +    
Sbjct: 154 FTYICCNS 161

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224

 Score = 77.4 bits (190), Expect = 1e-16
 Identities = 31/184 (16%), Positives = 55/184 (29%), Gaps = 36/184 (19%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
            V GATG+ GS  V E  + G  V A VR  Q+A              +     +  +  
Sbjct: 4   AVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAA-------------DRLGATVATL-- 48

Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
                   E  V  E  L +   V+  +          +G   +      +LV     + 
Sbjct: 49  ------VKEPLVLTEADLDSVDAVVDALSVPWG-----SGRGYLHLDFATHLVSLLRNSD 97

Query: 204 VNHFIMVSSL--------GTNKFGFPAAILNLFW--GVLLWKRKAEEALIASGLPYTIVR 253
                ++ S               FP +  +  W  G L    + +   + + + +  + 
Sbjct: 98  TLAVFILGSASLAMPGADHPMILDFPESAASQPWYDGALYQYYEYQFLQMNANVNWIGIS 157

Query: 254 PGGM 257
           P   
Sbjct: 158 PSEA 161

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286

 Score = 64.7 bits (158), Expect = 6e-12
 Identities = 34/189 (17%), Positives = 55/189 (29%), Gaps = 55/189 (29%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
            +AG  G +G    R L   G  V    RS Q                     G+Q    
Sbjct: 7   LIAGC-GDLGLELARRLTAQGHEVTGLRRSAQPMPA-----------------GVQT--- 45

Query: 144 LELVECDLEKRVQIEPALGNAS-VVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA 202
              +  D+ +   +   +     +++ C+ ASE   +          +  +N + A   A
Sbjct: 46  ---LIADVTRPDTLASIVHLRPEILVYCVAASE---YSDEHYRLSYVEGLRNTLSALEGA 99

Query: 203 KVNHFIMVSSLG---------------TNKFGFPAAILNLFWGVLLWKRKAEEALIASGL 247
            + H   VSS G                    F    +           +AE  L  +  
Sbjct: 100 PLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSGKRM----------LEAEALL--AAY 147

Query: 248 PYTIVRPGG 256
             TI+R  G
Sbjct: 148 SSTILRFSG 156

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364

 Score = 54.0 bits (129), Expect = 3e-08
 Identities = 27/203 (13%), Positives = 57/203 (28%), Gaps = 47/203 (23%)

Query: 83  AFVAGATGKVGSRTVRELLKLG-----FRVRAGVRSVQRAENLVQSVKQMKLDGELANKG 137
           A + G TG +G+     L         ++V    R  + A +    +             
Sbjct: 4   ALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWHEDNPI------------- 50

Query: 138 IQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVD 197
                    V+CD+      +  L   + V      +             + +  +N++D
Sbjct: 51  -------NYVQCDISDPDDSQAKLSPLTDVTHVFYVTWANRSTEQENCEANSKMFRNVLD 103

Query: 198 A--ATIAKVNHFIMVSSLGTNKFGFPA------------------AILNLFWGVLLWKRK 237
           A       + H  + +        F +                    +N ++ +      
Sbjct: 104 AVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFYYDL--EDIM 161

Query: 238 AEEALIASGLPYTIVRPGGMERP 260
            EE     GL +++ RPG +   
Sbjct: 162 LEEVEKKEGLTWSVHRPGNIFGF 184

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} Length = 322

 Score = 50.7 bits (122), Expect = 3e-07
 Identities = 31/144 (21%), Positives = 47/144 (32%), Gaps = 32/144 (22%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
            V G TG +GS  ++ LL+ G+ V   +R+    +  V  +    L G          E 
Sbjct: 5   CVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLT--NLPG--------ASEK 54

Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGAS---------EKEVFD--ITGPYRIDFQAT 192
           L     DL        A+     +     AS         E+ V    + G         
Sbjct: 55  LHFFNADLSNPDSFAAAIEGCVGIFHT--ASPIDFAVSEPEEIVTKRTVDG--------A 104

Query: 193 KNLVDAATIAK-VNHFIMVSSLGT 215
             ++ A   +K V  FI  SS   
Sbjct: 105 LGILKACVNSKTVKRFIYTSSGSA 128

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A Length = 338

 Score = 48.8 bits (117), Expect = 1e-06
 Identities = 33/144 (22%), Positives = 52/144 (36%), Gaps = 34/144 (23%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
            V G TG V S  V+ LL+ G+ V   VR     +  V  + +++  G+           
Sbjct: 13  CVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKK-VSHLLELQELGD----------- 60

Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGAS---------EKEVFD--ITGPYRIDFQAT 192
           L++   DL   +  E  +     V     A+         E ++    I G         
Sbjct: 61  LKIFRADLTDELSFEAPIAGCDFVFHV--ATPVHFASEDPENDMIKPAIQG--------V 110

Query: 193 KNLVDAATIAK-VNHFIMVSSLGT 215
            N++ A T AK V   I+ SS   
Sbjct: 111 VNVMKACTRAKSVKRVILTSSAAA 134

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 49.1 bits (116), Expect = 2e-06
 Identities = 41/279 (14%), Positives = 94/279 (33%), Gaps = 64/279 (22%)

Query: 27  SFGSCQ----ILKFPSSKKFSHPRKLKLPDFKAQASGTINICSEAVGATPTKADSKDDNL 82
           +  +C     +L+    +K  +  ++  P++ +++  + NI          +  S    L
Sbjct: 188 NLKNCNSPETVLE--MLQKLLY--QID-PNWTSRSDHSSNI--------KLRIHSIQAEL 234

Query: 83  A-FVAGATGK--------VGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGEL 133
              +     +        V +        L  ++    R  Q   + + +     +  + 
Sbjct: 235 RRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVT-DFLSAATTTHISLDH 293

Query: 134 ANKGIQPVEMLELVECDLEKRVQIEP--ALGNASVVICCIGASEKEVFDITGPYRIDFQA 191
            +  + P E+  L+   L+ R Q  P   L      +  I  S ++     G    D   
Sbjct: 294 HSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRD-----GLATWDN-- 346

Query: 192 TKNLVDAATIAKVNHFIMVS--SLGTN-------KFG-F------PAAILNLFWGVLLWK 235
            K++       K+   I  S   L          +   F      P  +L+L W  ++  
Sbjct: 347 WKHV----NCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVI-- 400

Query: 236 RKAEEALIASGL-PYTIVRPGGMERPTDAYKETHNITLS 273
            K++  ++ + L  Y++V     ++P ++     +I L 
Sbjct: 401 -KSDVMVVVNKLHKYSLVE----KQPKESTISIPSIYLE 434

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342

 Score = 47.7 bits (114), Expect = 3e-06
 Identities = 35/140 (25%), Positives = 50/140 (35%), Gaps = 27/140 (19%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
            V GA G V S  V +LL+ G++VR   RS  +  NL    K+             P   
Sbjct: 15  LVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANL---QKRWDAKY--------PGRF 63

Query: 144 LELVECDLEKRVQIEPALGNASVVI-----CCIGASEKEVFD--ITGPYRIDFQATKNLV 196
              V  D+ K+   +  +  A+ V              EV    I G        T N +
Sbjct: 64  ETAVVEDMLKQGAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGG--------TLNAL 115

Query: 197 DAATIAK-VNHFIMVSSLGT 215
            AA     V  F++ SS  +
Sbjct: 116 RAAAATPSVKRFVLTSSTVS 135

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* Length = 337

 Score = 46.5 bits (111), Expect = 7e-06
 Identities = 35/144 (24%), Positives = 52/144 (36%), Gaps = 33/144 (22%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
            V GA+G +GS  V  LL+ G+ VRA VR     + +      + L     +        
Sbjct: 9   CVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHL---LDLPKAETH-------- 57

Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGAS---------EKEVFD--ITGPYRIDFQAT 192
           L L + DL      + A+   + V     A+         E EV    I G         
Sbjct: 58  LTLWKADLADEGSFDEAIKGCTGVFHV--ATPMDFESKDPENEVIKPTIEG--------M 107

Query: 193 KNLVDAATIAK-VNHFIMVSSLGT 215
             ++ +   AK V   +  SS GT
Sbjct: 108 LGIMKSCAAAKTVRRLVFTSSAGT 131

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267

 Score = 45.0 bits (107), Expect = 1e-05
 Identities = 20/128 (15%), Positives = 34/128 (26%), Gaps = 24/128 (18%)

Query: 85  VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML 144
           V GA G++G      L  +   +R    S                  + A          
Sbjct: 8   VTGAAGQLGRVMRERLAPMAEILRLADLS----------------PLDPAGPNE------ 45

Query: 145 ELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKV 204
           E V+CDL     +   +     ++                 + +     NL +AA     
Sbjct: 46  ECVQCDLADANAVNAMVAGCDGIVHL--GGISVEKPFEQILQGNIIGLYNLYEAARAHGQ 103

Query: 205 NHFIMVSS 212
              +  SS
Sbjct: 104 PRIVFASS 111

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267

 Score = 44.2 bits (105), Expect = 3e-05
 Identities = 29/130 (22%), Positives = 40/130 (30%), Gaps = 28/130 (21%)

Query: 85  VAGATGKVGSRTVRELLKLGFRVRAGVR-SVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
           V GA G VGS     L  L   VR      +  AE                         
Sbjct: 7   VTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAAEAHE---------------------- 44

Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGAS-EKEVFDITGPYRIDFQATKNLVDAATIA 202
            E+V CDL     +   + +   +I   G S E+   D     + +     NL +AA   
Sbjct: 45  -EIVACDLADAQAVHDLVKDCDGIIHLGGVSVERPWND---ILQANIIGAYNLYEAARNL 100

Query: 203 KVNHFIMVSS 212
                +  SS
Sbjct: 101 GKPRIVFASS 110

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333

 Score = 44.2 bits (105), Expect = 4e-05
 Identities = 35/179 (19%), Positives = 59/179 (32%), Gaps = 29/179 (16%)

Query: 85  VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML 144
           + G  G++GS     LL+ G +V  G+      +N           G   +  ++    L
Sbjct: 26  ITGICGQIGSHIAELLLERGDKVV-GI------DNFA--------TGRREH--LKDHPNL 68

Query: 145 ELVECDLEKRVQIEPALGNASV-VICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
             VE  +     +   +G+     +    AS K+  D       +     N+V AA    
Sbjct: 69  TFVEGSIADHALVNQLIGDLQPDAVVHTAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNN 128

Query: 204 VNHFIMVSS---LGTNKFGFP------AAILNLFWGVLLWKRKAEEALIASGLPYTIVR 253
           V  F+   +    G      P          N  + +   K   E+ L  SGL +   R
Sbjct: 129 VGRFVYFQTALCYGVKPIQQPVRLDHPRNPANSSYAIS--KSANEDYLEYSGLDFVTFR 185

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} Length = 286

 Score = 41.4 bits (97), Expect = 3e-04
 Identities = 21/131 (16%), Positives = 35/131 (26%), Gaps = 34/131 (25%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
              G  G       R L   G+R+    R+  + E              +   G +P+  
Sbjct: 9   LSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQME-------------AIRASGAEPLLW 54

Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
                   E     EP+L   + ++           D   P      A      AA  A+
Sbjct: 55  ------PGE-----EPSLDGVTHLLISTAPDSGG--D---PVL----AALGDQIAARAAQ 94

Query: 204 VNHFIMVSSLG 214
                 +S+  
Sbjct: 95  FRWVGYLSTTA 105

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	380
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	100.0
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	100.0
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	100.0
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	100.0
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	100.0
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	100.0
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	100.0
1xq6_A	253	Unknown protein; structural genomics, protein stru	100.0
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	100.0
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	100.0
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	100.0
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	100.0
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	100.0
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	100.0
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	100.0
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	100.0
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	100.0
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.98
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.98
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.98
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.98
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.98
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.98
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.97
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.97
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.97
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.97
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.97
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.97
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.97
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.97
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.97
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.97
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.97
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.97
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.97
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.97
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.97
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.97
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.97
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.97
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.97
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.97
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.97
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.97
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.97
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.97
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.97
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.97
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.97
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.97
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.97
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.97
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.97
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.97
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.97
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.97
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.97
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.97
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.97
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.97
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.97
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.97
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.97
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.96
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.96
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.96
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.96
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.96
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.96
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.96
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.96
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.96
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.96
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.96
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.96
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.96
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.96
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.96
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.96
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.96
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.96
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.95
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.95
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.95
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.95
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.95
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.95
1spx_A	278	Short-chain reductase family member (5L265); paral	99.95
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.95
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.95
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.95
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.94
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.94
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.94
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.94
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.94
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.94
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.94
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.94
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.94
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.94
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.94
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.94
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.94
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.94
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.94
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.94
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.94
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.94
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.94
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.94
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.94
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.94
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.94
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.93
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.93
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.93
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.93
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.93
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.93
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.93
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.93
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.93
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.93
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.93
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.93
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.93
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.93
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.93
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.93
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.93
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.93
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.93
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.93
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.93
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.93
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.93
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.93
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.93
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.93
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.93
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.93
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.93
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.93
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.93
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.93
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.93
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.93
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.93
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.93
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.93
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.93
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.93
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.93
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.93
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.93
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.93
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.93
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.93
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.93
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.93
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.93
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.93
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.93
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.93
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.93
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.93
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.92
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.92
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.92
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.92
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.92
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.92
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.92
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.92
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.92
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.92
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.92
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.92
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.92
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.92
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.92
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.92
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.92
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.92
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.92
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.92
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.92
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.92
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.92
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.92
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.92
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.92
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.92
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.92
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.92
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.92
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.92
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.92
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.92
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.92
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.92
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.92
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.92
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.92
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.92
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.92
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.92
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.92
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.91
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.91
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.91
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.91
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.91
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.91
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.91
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.91
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.91
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.91
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.91
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.91
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.91
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.91
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.91
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.91
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.91
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.91
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.91
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.91
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.91
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.91
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.91
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.91
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.91
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.91
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.91
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.91
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.91
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.91
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.91
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.91
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.91
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.91
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.91
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.91
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.91
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.91
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.91
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.91
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.9
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.9
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.9
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.9
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.9
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.9
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.9
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.9
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.9
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.9
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.9
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.9
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.9
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.9
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.9
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.9
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.9
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.89
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.89
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.89
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.89
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.89
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.89
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.89
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.88
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.88
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.88
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.88
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.88
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.88
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.88
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.88
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.88
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.88
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.88
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.87
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.87
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.87
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.86
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.86
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.85
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.85
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.84
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.84
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.84
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.82
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.79
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.78
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.78
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.76
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.75
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.74
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.73
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.72
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.7
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.68
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.68
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.67
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.66
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.66
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.65
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.62
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.6
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	99.39
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.36
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.35
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	99.15
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	99.13
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	99.08
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.08
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	99.04
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	99.03
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	99.0
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	98.97
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.9
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.9
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.82
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.77
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.72
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	98.71
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.66
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	98.59
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.58
3c85_A	183	Putative glutathione-regulated potassium-efflux S	98.57
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	98.5
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	98.48
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.46
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	98.41
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	98.34
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	98.25
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	98.23
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.22
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.17
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	98.16
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	98.13
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	98.13
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	98.05
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	98.05
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.02
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.01
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	97.98
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.98
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	97.96
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	97.95
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	97.95
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	97.92
1lnq_A	336	MTHK channels, potassium channel related protein;	97.91
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	97.9
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	97.88
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	97.88
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	97.87
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	97.85
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	97.85
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	97.84
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	97.84
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	97.83
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	97.82
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	97.82
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	97.81
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	97.79
3tl2_A	315	Malate dehydrogenase; center for structural genomi	97.79
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	97.79
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	97.78
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	97.77
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	97.77
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	97.74
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	97.74
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.72
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	97.71
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	97.71
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	97.7
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.69
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	97.69
4g65_A	461	TRK system potassium uptake protein TRKA; structur	97.65
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	97.65
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.62
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	97.62
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.61
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.61
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	97.61
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	97.58
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	97.57
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.57
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	97.54
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.52
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	97.52
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	97.51
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.48
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.48
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	97.48
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.47
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	97.44
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	97.42
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.42
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	97.41
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.41
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	97.4
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	97.39
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	97.39
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	97.39
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	97.38
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	97.35
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.35
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	97.34
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	97.34
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	97.34
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	97.33
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.32
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.32
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.31
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	97.31
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.3
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.28
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	97.27
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	97.27
4g65_A	461	TRK system potassium uptake protein TRKA; structur	97.27
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.25
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.23
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	97.23
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	97.22
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	97.21
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.21
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	97.17
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.16
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	97.14
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	97.14
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	97.14
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	97.13
3qha_A	296	Putative oxidoreductase; seattle structural genomi	97.11
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.1
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.1
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.09
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	97.08
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	97.07
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.07
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	97.05
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	97.03
2dpo_A	319	L-gulonate 3-dehydrogenase; structural genomics, N	97.03
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.01
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	97.01
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	97.0
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	96.99
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.99
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	96.98
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	96.96
3vtf_A	444	UDP-glucose 6-dehydrogenase; two discrete alpha/be	96.96
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.95
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	96.93
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	96.91
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	96.91
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.9
1oi7_A	288	Succinyl-COA synthetase alpha chain; SCS, ligase,	96.89
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	96.88
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.88
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	96.87
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	96.86
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	96.86
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	96.86
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	96.86
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	96.85
4ezb_A	317	Uncharacterized conserved protein; structural geno	96.85
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	96.85
1y81_A	138	Conserved hypothetical protein; hyperthermophIle,	96.84
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	96.84
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	96.83
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	96.83
1y8q_A	346	Ubiquitin-like 1 activating enzyme E1A; SUMO, hete	96.82
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	96.82
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	96.81
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	96.81
1ys4_A	354	Aspartate-semialdehyde dehydrogenase; oxidoreducta	96.81
2r00_A	336	Aspartate-semialdehyde dehydrogenase; conformation	96.8
1obb_A	480	Maltase, alpha-glucosidase; glycosidase, sulfinic	96.8
3ado_A	319	Lambda-crystallin; L-gulonate 3-dehydrogenase, str	96.8
3cky_A	301	2-hydroxymethyl glutarate dehydrogenase; rossmann	96.8
1y8q_B	640	Anthracycline-, ubiquitin-like 2 activating enzyme	96.79
3obb_A	300	Probable 3-hydroxyisobutyrate dehydrogenase; struc	96.78
2ahr_A	259	Putative pyrroline carboxylate reductase; pyrrolin	96.77
1dlj_A	402	UDP-glucose dehydrogenase; rossmann fold, ternary	96.76
3ax6_A	380	Phosphoribosylaminoimidazole carboxylase, ATPase;	96.75
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	96.75
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	96.74
2i6t_A	303	Ubiquitin-conjugating enzyme E2-like isoform A; L-	96.74
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	96.74
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	96.74
3dr3_A	337	N-acetyl-gamma-glutamyl-phosphate reductase; csgid	96.72
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	96.72
2y0c_A	478	BCEC, UDP-glucose dehydrogenase; oxidoreductase, c	96.71
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	96.71
2uyy_A	316	N-PAC protein; long-chain dehydrogenase, cytokine;	96.7

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=100.00  E-value=4.1e-34  Score=269.88  Aligned_cols=227  Identities=12%  Similarity=0.044  Sum_probs=183.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      +|+|||||||||||++|+++|+++|++|++++|++.... +                     .+++++.+|++ .+++.+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~---------------------~~~~~~~~Dl~-~~~~~~   58 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-I---------------------NDYEYRVSDYT-LEDLIN   58 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC---------------------------CCEEEECCCC-HHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-C---------------------CceEEEEcccc-HHHHHH
Confidence            478999999999999999999999999999999944322 1                     47899999999 999999


Q ss_pred             HhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCC-----CchhhhchhhHHHHH
Q 016901          160 ALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNLFWGVLLW  234 (380)
Q Consensus       160 a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~-----~~~~~~~~~~~Y~~s  234 (380)
                      +++++|+||||||.....  ++...+++|+.++.+++++|++.+++||||+||.+++...     .+..+..+.+.|+.+
T Consensus        59 ~~~~~d~Vih~a~~~~~~--~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~s  136 (311)
T 3m2p_A           59 QLNDVDAVVHLAATRGSQ--GKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEKELPLPDLMYGVS  136 (311)
T ss_dssp             HTTTCSEEEECCCCCCSS--SCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSHHHHH
T ss_pred             hhcCCCEEEEccccCCCC--ChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCchhHHH
Confidence            999999999999976544  5666789999999999999999999999999998774321     122234456789999


Q ss_pred             HHHHHHHHHH----CCCCEEEEecCcccCCCcccc-----------cccceeeccCCcccCCCCCHHHHHHHHHHHHhCC
Q 016901          235 KRKAEEALIA----SGLPYTIVRPGGMERPTDAYK-----------ETHNITLSQEDTLFGGQVSNLQVAELLACMAKNR  299 (380)
Q Consensus       235 K~~~E~~l~~----~g~~~~ivRpg~v~gp~~~~~-----------~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~  299 (380)
                      |+.+|+++++    .|++++++||+++|||+....           ....+.+........+++|++|+|++++.+++++
T Consensus       137 K~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~  216 (311)
T 3m2p_A          137 KLACEHIGNIYSRKKGLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQE  216 (311)
T ss_dssp             HHHHHHHHHHHHHHSCCEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCT
T ss_pred             HHHHHHHHHHHHHHcCCCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcC
Confidence            9999999875    799999999999999976421           0112222222333346899999999999999887


Q ss_pred             CCccCcEEEEecCCCCCcchHHHHHHhcCCCCCC
Q 016901          300 SLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE  333 (380)
Q Consensus       300 ~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~~~  333 (380)
                      .  .+++||+++++..+..|+++.+.+.++....
T Consensus       217 ~--~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~  248 (311)
T 3m2p_A          217 K--VSGTFNIGSGDALTNYEVANTINNAFGNKDN  248 (311)
T ss_dssp             T--CCEEEEECCSCEECHHHHHHHHHHHTTCTTC
T ss_pred             C--CCCeEEeCCCCcccHHHHHHHHHHHhCCCCc
Confidence            5  4899999999999999999999999987654

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=100.00  E-value=5.1e-34  Score=258.71  Aligned_cols=217  Identities=25%  Similarity=0.314  Sum_probs=174.1

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCce-EEEEcCCCCh
Q 016901           76 DSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML-ELVECDLEKR  154 (380)
Q Consensus        76 ~~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~Dl~d~  154 (380)
                      ..+++|+|||||||||||++++++|+++|++|++++|++++...+..                   .++ +++.+|++  
T Consensus        17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~-------------------~~~~~~~~~Dl~--   75 (236)
T 3e8x_A           17 LYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE-------------------RGASDIVVANLE--   75 (236)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-------------------TTCSEEEECCTT--
T ss_pred             cCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh-------------------CCCceEEEcccH--
Confidence            34578999999999999999999999999999999999988766543                   578 99999999  


Q ss_pred             hcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCCchhhhchhhHHHHH
Q 016901          155 VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLW  234 (380)
Q Consensus       155 ~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~~Y~~s  234 (380)
                      +++.++++++|+||||||....  .++...+++|+.++.+++++|++.+++|||++||++....  ...+ .+...|+.+
T Consensus        76 ~~~~~~~~~~D~vi~~ag~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~--~~~~-~~~~~Y~~s  150 (236)
T 3e8x_A           76 EDFSHAFASIDAVVFAAGSGPH--TGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDP--DQGP-MNMRHYLVA  150 (236)
T ss_dssp             SCCGGGGTTCSEEEECCCCCTT--SCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCG--GGSC-GGGHHHHHH
T ss_pred             HHHHHHHcCCCEEEECCCCCCC--CCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCC--CCCh-hhhhhHHHH
Confidence            7889999999999999996542  3445568899999999999999999999999999876432  1111 456789999


Q ss_pred             HHHHHHHHHHCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHHHHhCCCCccCcEEEEecCCC
Q 016901          235 KRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETT  314 (380)
Q Consensus       235 K~~~E~~l~~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~~~~~~~~~ni~~~~~  314 (380)
                      |+.+|+++++.|+++++||||+++|+...    ..+...........+++++|+|++++.+++++. ..+++||+.++. 
T Consensus       151 K~~~e~~~~~~gi~~~~lrpg~v~~~~~~----~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~-~~g~~~~v~~~~-  224 (236)
T 3e8x_A          151 KRLADDELKRSSLDYTIVRPGPLSNEEST----GKVTVSPHFSEITRSITRHDVAKVIAELVDQQH-TIGKTFEVLNGD-  224 (236)
T ss_dssp             HHHHHHHHHHSSSEEEEEEECSEECSCCC----SEEEEESSCSCCCCCEEHHHHHHHHHHHTTCGG-GTTEEEEEEECS-
T ss_pred             HHHHHHHHHHCCCCEEEEeCCcccCCCCC----CeEEeccCCCcccCcEeHHHHHHHHHHHhcCcc-ccCCeEEEeCCC-
Confidence            99999999999999999999999998542    112222222223578999999999999999876 568999999984 


Q ss_pred             CCcchHHHHH
Q 016901          315 APLTPMEELL  324 (380)
Q Consensus       315 ~s~~~~~e~~  324 (380)
                      .++.|+++.+
T Consensus       225 ~~~~e~~~~i  234 (236)
T 3e8x_A          225 TPIAKVVEQL  234 (236)
T ss_dssp             EEHHHHHHTC
T ss_pred             cCHHHHHHHh
Confidence            5566665544

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=100.00  E-value=1.4e-34  Score=277.35  Aligned_cols=245  Identities=14%  Similarity=0.057  Sum_probs=188.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ++|+|||||||||||++|+++|+++|++|++++|+..........+......        ....+++++.+|++|.+++.
T Consensus        24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~Dl~d~~~~~   95 (351)
T 3ruf_A           24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVST--------EQWSRFCFIEGDIRDLTTCE   95 (351)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCH--------HHHTTEEEEECCTTCHHHHH
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhcccc--------ccCCceEEEEccCCCHHHHH
Confidence            5789999999999999999999999999999999765433333322221000        00057999999999999999


Q ss_pred             HHhcCCCEEEEccccCcc--ccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCC-----CchhhhchhhHH
Q 016901          159 PALGNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNLFWGV  231 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~~--~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~-----~~~~~~~~~~~Y  231 (380)
                      ++++++|+||||||....  ...++...+++|+.++.+++++|++.++++|||+||.+++...     .+..+..+.+.|
T Consensus        96 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y  175 (351)
T 3ruf_A           96 QVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALPKVEENIGNPLSPY  175 (351)
T ss_dssp             HHTTTCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHH
T ss_pred             HHhcCCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCCCCCCCccCCCCCCCChh
Confidence            999999999999986432  1223445578999999999999999999999999998775322     122233556789


Q ss_pred             HHHHHHHHHHHHH----CCCCEEEEecCcccCCCccccc---------------ccceeeccCCcccCCCCCHHHHHHHH
Q 016901          232 LLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE---------------THNITLSQEDTLFGGQVSNLQVAELL  292 (380)
Q Consensus       232 ~~sK~~~E~~l~~----~g~~~~ivRpg~v~gp~~~~~~---------------~~~~~~~~~~~~~~~~i~~~DvA~~i  292 (380)
                      +.+|+.+|++++.    .|+++++|||+++|||+.....               ...+.+........+++|++|+|+++
T Consensus       176 ~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~  255 (351)
T 3ruf_A          176 AVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMN  255 (351)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHHHH
Confidence            9999999998863    6999999999999999753210               11112222233344789999999999


Q ss_pred             HHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCCCC
Q 016901          293 ACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (380)
Q Consensus       293 ~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~  331 (380)
                      +.++.++....+++||+++++..++.|+++.+.+.++..
T Consensus       256 ~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~  294 (351)
T 3ruf_A          256 ILSALAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNLI  294 (351)
T ss_dssp             HHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHTT
T ss_pred             HHHHhhccccCCCEEEeCCCCcccHHHHHHHHHHHhCcc
Confidence            999988433568999999999999999999999999873

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=100.00  E-value=2.5e-34  Score=275.24  Aligned_cols=230  Identities=17%  Similarity=0.085  Sum_probs=183.1

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ..++|+|||||||||||++|+++|+++|++|++++|+.+.                         .+++++.+|++|.++
T Consensus        16 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-------------------------~~~~~~~~Dl~d~~~   70 (347)
T 4id9_A           16 PRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-------------------------TGGEEVVGSLEDGQA   70 (347)
T ss_dssp             -----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-------------------------SCCSEEESCTTCHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-------------------------CCccEEecCcCCHHH
Confidence            4467899999999999999999999999999999998653                         468899999999999


Q ss_pred             HHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCC-------CCchhhhchhh
Q 016901          157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKF-------GFPAAILNLFW  229 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~-------~~~~~~~~~~~  229 (380)
                      +.+++.++|+|||||+............+++|+.|+.+++++|++.++++|||+||.+++..       ..+..+..+..
T Consensus        71 ~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~  150 (347)
T 4id9_A           71 LSDAIMGVSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRPEFLPVTEDHPLCPNS  150 (347)
T ss_dssp             HHHHHTTCSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTSCSSSSBCTTSCCCCCS
T ss_pred             HHHHHhCCCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCCCCCCCcCCCCCCCCCC
Confidence            99999999999999997654444445668899999999999999999999999999877543       11223345667


Q ss_pred             HHHHHHHHHHHHHH----HCCCCEEEEecCccc-------------CCCcccc----------------------cccce
Q 016901          230 GVLLWKRKAEEALI----ASGLPYTIVRPGGME-------------RPTDAYK----------------------ETHNI  270 (380)
Q Consensus       230 ~Y~~sK~~~E~~l~----~~g~~~~ivRpg~v~-------------gp~~~~~----------------------~~~~~  270 (380)
                      .|+.+|+.+|++++    +.|+++++|||+++|             ||+....                      ....+
T Consensus       151 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (347)
T 4id9_A          151 PYGLTKLLGEELVRFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPS  230 (347)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCC
T ss_pred             hHHHHHHHHHHHHHHHHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCe
Confidence            89999999999886    479999999999999             7753211                      00111


Q ss_pred             eeccCCcccCCC----CCHHHHHHHHHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCCCCC
Q 016901          271 TLSQEDTLFGGQ----VSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (380)
Q Consensus       271 ~~~~~~~~~~~~----i~~~DvA~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~~  332 (380)
                      .+.........+    +|++|+|++++.+++++. ..+++||+++++..++.|+++.+.+.+|...
T Consensus       231 ~~~g~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~-~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~  295 (347)
T 4id9_A          231 HILARNENGRPFRMHITDTRDMVAGILLALDHPE-AAGGTFNLGADEPADFAALLPKIAALTGLPI  295 (347)
T ss_dssp             EEEEECTTCCBCEECEEEHHHHHHHHHHHHHCGG-GTTEEEEESCSSCEEHHHHHHHHHHHHCCCE
T ss_pred             EEeCCCCcccCCccCcEeHHHHHHHHHHHhcCcc-cCCCeEEECCCCcccHHHHHHHHHHHhCCCC
Confidence            111122223367    999999999999999875 4589999999999999999999999998643

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=3.5e-33  Score=251.37  Aligned_cols=213  Identities=17%  Similarity=0.105  Sum_probs=166.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ++|+|||||||||||++++++|+++|++|++++|++++...+                    ..+++++.+|++|.+++.
T Consensus         3 ~m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--------------------~~~~~~~~~Dl~d~~~~~   62 (227)
T 3dhn_A            3 KVKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE--------------------NEHLKVKKADVSSLDEVC   62 (227)
T ss_dssp             CCCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC--------------------CTTEEEECCCTTCHHHHH
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc--------------------cCceEEEEecCCCHHHHH
Confidence            357999999999999999999999999999999998653221                    167999999999999999


Q ss_pred             HHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCC----CchhhhchhhHHHHH
Q 016901          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG----FPAAILNLFWGVLLW  234 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~----~~~~~~~~~~~Y~~s  234 (380)
                      ++++++|+||||||....    ....+++|+.++.+++++|++.+++||||+||.++....    ..+.+..+...|+.+
T Consensus        63 ~~~~~~d~vi~~a~~~~~----~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~Y~~s  138 (227)
T 3dhn_A           63 EVCKGADAVISAFNPGWN----NPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPGLRLMDSGEVPENILPGV  138 (227)
T ss_dssp             HHHTTCSEEEECCCC----------CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETTEEGGGTTCSCGGGHHHH
T ss_pred             HHhcCCCEEEEeCcCCCC----ChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCCCccccCCcchHHHHHHH
Confidence            999999999999986522    223688999999999999999999999999998764321    112233456789999


Q ss_pred             HHHHHHHHH----HCCCCEEEEecCcccCCCccccc---ccceeeccCCcccCCCCCHHHHHHHHHHHHhCCCCccCcEE
Q 016901          235 KRKAEEALI----ASGLPYTIVRPGGMERPTDAYKE---THNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVV  307 (380)
Q Consensus       235 K~~~E~~l~----~~g~~~~ivRpg~v~gp~~~~~~---~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~~~~~~~~~  307 (380)
                      |+.+|.+++    +.|++++++|||++|||+.....   .....+.....  ..++|++|+|++++.+++++. ..+++|
T Consensus       139 K~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~--~~~i~~~Dva~ai~~~l~~~~-~~g~~~  215 (227)
T 3dhn_A          139 KALGEFYLNFLMKEKEIDWVFFSPAADMRPGVRTGRYRLGKDDMIVDIVG--NSHISVEDYAAAMIDELEHPK-HHQERF  215 (227)
T ss_dssp             HHHHHHHHHTGGGCCSSEEEEEECCSEEESCCCCCCCEEESSBCCCCTTS--CCEEEHHHHHHHHHHHHHSCC-CCSEEE
T ss_pred             HHHHHHHHHHHhhccCccEEEEeCCcccCCCccccceeecCCCcccCCCC--CcEEeHHHHHHHHHHHHhCcc-ccCcEE
Confidence            999996665    47899999999999999753211   00111111111  358999999999999999988 679999


Q ss_pred             EEecCCCCCcc
Q 016901          308 EVIAETTAPLT  318 (380)
Q Consensus       308 ni~~~~~~s~~  318 (380)
                      ++++++..+..
T Consensus       216 ~~~~~~~~~~~  226 (227)
T 3dhn_A          216 TIGYLEHHHHH  226 (227)
T ss_dssp             EEECCSCCC--
T ss_pred             EEEeehhcccC
Confidence            99999987653

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=100.00  E-value=1.6e-33  Score=268.87  Aligned_cols=231  Identities=16%  Similarity=0.101  Sum_probs=176.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ++|+|||||||||||++++++|+++|++|++++|+..+...+..                   .+++++.+|++|.+++.
T Consensus        12 ~~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-------------------~~~~~~~~Dl~d~~~~~   72 (342)
T 2x4g_A           12 AHVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAY-------------------LEPECRVAEMLDHAGLE   72 (342)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGG-------------------GCCEEEECCTTCHHHHH
T ss_pred             cCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhcc-------------------CCeEEEEecCCCHHHHH
Confidence            44689999999999999999999999999999998765432210                   37899999999999999


Q ss_pred             HHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCC------chhhhch----h
Q 016901          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF------PAAILNL----F  228 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~------~~~~~~~----~  228 (380)
                      ++++++|+||||||.......++...+++|+.++.+++++|++.+++||||+||.+++....      +..+..+    .
T Consensus        73 ~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~~~~  152 (342)
T 2x4g_A           73 RALRGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGK  152 (342)
T ss_dssp             HHTTTCSEEEEC------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTTSSCBCTTCCCSSCCTTS
T ss_pred             HHHcCCCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCCCCCCCCCCCCCcccccc
Confidence            99999999999999765444456677899999999999999999999999999987743211      1222334    6


Q ss_pred             hHHHHHHHHHHHHHHH---CCCCEEEEecCcccCCCc-ccccccce--eeccC-----CcccCCCCCHHHHHHHHHHHHh
Q 016901          229 WGVLLWKRKAEEALIA---SGLPYTIVRPGGMERPTD-AYKETHNI--TLSQE-----DTLFGGQVSNLQVAELLACMAK  297 (380)
Q Consensus       229 ~~Y~~sK~~~E~~l~~---~g~~~~ivRpg~v~gp~~-~~~~~~~~--~~~~~-----~~~~~~~i~~~DvA~~i~~~l~  297 (380)
                      ..|+.+|+.+|++++.   .|+++++||||++|||+. ... ...+  .+..+     .....+++|++|+|++++.+++
T Consensus       153 ~~Y~~sK~~~e~~~~~~~~~g~~~~ilrp~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~  231 (342)
T 2x4g_A          153 SSYVLCKWALDEQAREQARNGLPVVIGIPGMVLGELDIGPT-TGRVITAIGNGEMTHYVAGQRNVIDAAEAGRGLLMALE  231 (342)
T ss_dssp             CHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEECSCCSSCS-TTHHHHHHHTTCCCEEECCEEEEEEHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHHhhcCCcEEEEeCCceECCCCcccc-HHHHHHHHHcCCCccccCCCcceeeHHHHHHHHHHHHh
Confidence            6899999999998875   399999999999999975 200 0000  00000     1122357999999999999998


Q ss_pred             CCCCccCcEEEEecCCCCCcchHHHHHHhcCCCCC
Q 016901          298 NRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (380)
Q Consensus       298 ~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~~  332 (380)
                      ++..  +++||+++++ .+..|+++.+.+++|...
T Consensus       232 ~~~~--g~~~~v~~~~-~s~~e~~~~i~~~~g~~~  263 (342)
T 2x4g_A          232 RGRI--GERYLLTGHN-LEMADLTRRIAELLGQPA  263 (342)
T ss_dssp             HSCT--TCEEEECCEE-EEHHHHHHHHHHHHTCCC
T ss_pred             CCCC--CceEEEcCCc-ccHHHHHHHHHHHhCCCC
Confidence            8763  8899999999 999999999999988754

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=100.00  E-value=2.8e-34  Score=277.54  Aligned_cols=242  Identities=16%  Similarity=0.179  Sum_probs=185.4

Q ss_pred             CCCCCCCCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCC
Q 016901           73 TKADSKDDNLAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDL  151 (380)
Q Consensus        73 ~~~~~~~~~~vlVtGatG~iG~~lv~~Ll~~-G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl  151 (380)
                      ..|..+++|+|||||||||||++|+++|+++ |++|++++|+.++...+.                  ...+++++.+|+
T Consensus        17 ~~~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~------------------~~~~v~~~~~Dl   78 (372)
T 3slg_A           17 QGPGSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLV------------------KHERMHFFEGDI   78 (372)
T ss_dssp             ------CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGG------------------GSTTEEEEECCT
T ss_pred             cCCcccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhc------------------cCCCeEEEeCcc
Confidence            3344567889999999999999999999998 999999999876543321                  116899999999


Q ss_pred             C-ChhcHHHHhcCCCEEEEccccCcccc--CCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCC-----chh
Q 016901          152 E-KRVQIEPALGNASVVICCIGASEKEV--FDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF-----PAA  223 (380)
Q Consensus       152 ~-d~~~~~~a~~~~d~Vi~~Ag~~~~~~--~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~-----~~~  223 (380)
                      + |.+.+.++++++|+||||||......  .++...+++|+.++.+++++|++.+ +||||+||.+++....     +..
T Consensus        79 ~~d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS~~vyg~~~~~~~~e~~  157 (372)
T 3slg_A           79 TINKEWVEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCADEQFDPDA  157 (372)
T ss_dssp             TTCHHHHHHHHHHCSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECCGGGGBSCCCSSBCTTT
T ss_pred             CCCHHHHHHHhccCCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCcHHHhCCCCCCCCCccc
Confidence            9 99999999999999999999654321  2344567899999999999999999 9999999987643211     111


Q ss_pred             h-------hchhhHHHHHHHHHHHHHHHC---CCCEEEEecCcccCCCcccc-------------------cccceeecc
Q 016901          224 I-------LNLFWGVLLWKRKAEEALIAS---GLPYTIVRPGGMERPTDAYK-------------------ETHNITLSQ  274 (380)
Q Consensus       224 ~-------~~~~~~Y~~sK~~~E~~l~~~---g~~~~ivRpg~v~gp~~~~~-------------------~~~~~~~~~  274 (380)
                      .       ..+.+.|+.+|+.+|++++..   |+++++|||+++|||+....                   ....+.+..
T Consensus       158 ~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (372)
T 3slg_A          158 SALTYGPINKPRWIYACSKQLMDRVIWGYGMEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVD  237 (372)
T ss_dssp             CCEEECCTTCTTHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGG
T ss_pred             cccccCCCCCCCCcHHHHHHHHHHHHHHHHHCCCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeC
Confidence            1       145568999999999999865   99999999999999975310                   011122222


Q ss_pred             CCcccCCCCCHHHHHHHHHHHHhCCCC-ccCcEEEEecC-CCCCcchHHHHHHhcCCCCCC
Q 016901          275 EDTLFGGQVSNLQVAELLACMAKNRSL-SYCKVVEVIAE-TTAPLTPMEELLAKIPSQRAE  333 (380)
Q Consensus       275 ~~~~~~~~i~~~DvA~~i~~~l~~~~~-~~~~~~ni~~~-~~~s~~~~~e~~~~~~~~~~~  333 (380)
                      ......+++|++|+|++++.+++++.. ..+++||++++ +..|+.|+++.+.+++|....
T Consensus       238 ~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~g~~~~  298 (372)
T 3slg_A          238 GGSQKRAFTYVDDGISALMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFPE  298 (372)
T ss_dssp             GGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTCEEEHHHHHHHHHHHHHHCTT
T ss_pred             CCceEEEEEEHHHHHHHHHHHHhcccCcCCCceEEeCCCCCCccHHHHHHHHHHHhCCCcc
Confidence            223334689999999999999998641 35899999994 889999999999999886543

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=100.00  E-value=2.1e-32  Score=249.56  Aligned_cols=227  Identities=27%  Similarity=0.382  Sum_probs=178.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHC--CCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKL--GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~--G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ++|+||||||+||||++++++|+++  |++|++++|++++...+                    ..+++++.+|++|.++
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~--------------------~~~~~~~~~D~~d~~~   62 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI--------------------GGEADVFIGDITDADS   62 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT--------------------TCCTTEEECCTTSHHH
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc--------------------CCCeeEEEecCCCHHH
Confidence            5689999999999999999999999  89999999997655432                    1568899999999999


Q ss_pred             HHHHhcCCCEEEEccccCcccc---------------CCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCCc
Q 016901          157 IEPALGNASVVICCIGASEKEV---------------FDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFP  221 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag~~~~~~---------------~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~  221 (380)
                      +.++++++|+||||||......               .+....+++|+.++.++++++++.++++|||+||.++.....+
T Consensus        63 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~  142 (253)
T 1xq6_A           63 INPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHP  142 (253)
T ss_dssp             HHHHHTTCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCG
T ss_pred             HHHHHcCCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCCCCCCc
Confidence            9999999999999998653211               1112346899999999999999999999999999887543222


Q ss_pred             hhhhchhhHHHHHHHHHHHHHHHCCCCEEEEecCcccCCCcccccccceeeccCCcc---cCCCCCHHHHHHHHHHHHhC
Q 016901          222 AAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTL---FGGQVSNLQVAELLACMAKN  298 (380)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~---~~~~i~~~DvA~~i~~~l~~  298 (380)
                      .... ....|..+|..+|.++++.|+++++||||+++|+.....   ..........   ...+++++|+|++++.++++
T Consensus       143 ~~~~-~~~~y~~sK~~~e~~~~~~~i~~~~vrpg~v~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~Dva~~~~~~~~~  218 (253)
T 1xq6_A          143 LNKL-GNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVR---ELLVGKDDELLQTDTKTVPRADVAEVCIQALLF  218 (253)
T ss_dssp             GGGG-GGCCHHHHHHHHHHHHHTSSSCEEEEEECEEECSCSSSS---CEEEESTTGGGGSSCCEEEHHHHHHHHHHHTTC
T ss_pred             cccc-cchhHHHHHHHHHHHHHhCCCceEEEecceeecCCcchh---hhhccCCcCCcCCCCcEEcHHHHHHHHHHHHcC
Confidence            2211 113588899999999999999999999999999864321   1111111111   12479999999999999988


Q ss_pred             CCCccCcEEEEecCC---CCCcchHHHHHHhcCCC
Q 016901          299 RSLSYCKVVEVIAET---TAPLTPMEELLAKIPSQ  330 (380)
Q Consensus       299 ~~~~~~~~~ni~~~~---~~s~~~~~e~~~~~~~~  330 (380)
                      +. ..+++||++++.   ..++.|+++.+.++.|+
T Consensus       219 ~~-~~g~~~~i~~~~~~~~~s~~e~~~~~~~~~g~  252 (253)
T 1xq6_A          219 EE-AKNKAFDLGSKPEGTSTPTKDFKALFSQVTSR  252 (253)
T ss_dssp             GG-GTTEEEEEEECCTTTSCCCCCHHHHHHTCCCC
T ss_pred             cc-ccCCEEEecCCCcCCCCCHHHHHHHHHHHhCC
Confidence            65 458899999975   58999999999999875

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=100.00  E-value=1.8e-33  Score=269.23  Aligned_cols=239  Identities=13%  Similarity=0.083  Sum_probs=182.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCCchh--HHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCC
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQR--AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLE  152 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G--~~V~~l~R~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~  152 (380)
                      .+++|+|||||||||||++|+++|+++|  ++|++++|....  ...+               ......++++++.+|++
T Consensus        21 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l---------------~~~~~~~~~~~~~~Dl~   85 (346)
T 4egb_A           21 QSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNV---------------KSIQDHPNYYFVKGEIQ   85 (346)
T ss_dssp             ---CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGG---------------TTTTTCTTEEEEECCTT
T ss_pred             ccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhh---------------hhhccCCCeEEEEcCCC
Confidence            3467899999999999999999999999  778888876421  1111               01112268999999999


Q ss_pred             ChhcHHHHhcC--CCEEEEccccCccc--cCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCC------Cch
Q 016901          153 KRVQIEPALGN--ASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG------FPA  222 (380)
Q Consensus       153 d~~~~~~a~~~--~d~Vi~~Ag~~~~~--~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~------~~~  222 (380)
                      |.+++.+++++  +|+||||||.....  ..++...+++|+.|+.+++++|++.+++||||+||.+++...      .+.
T Consensus        86 d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~~~~~~~E~  165 (346)
T 4egb_A           86 NGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGKTGRFTEE  165 (346)
T ss_dssp             CHHHHHHHHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCCSSCCBCTT
T ss_pred             CHHHHHHHHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCCcCCCcCCC
Confidence            99999999987  99999999965432  234566689999999999999999999999999998774432      122


Q ss_pred             hhhchhhHHHHHHHHHHHHHHH----CCCCEEEEecCcccCCCcccc-----------cccceeeccCCcccCCCCCHHH
Q 016901          223 AILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK-----------ETHNITLSQEDTLFGGQVSNLQ  287 (380)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~~----~g~~~~ivRpg~v~gp~~~~~-----------~~~~~~~~~~~~~~~~~i~~~D  287 (380)
                      .+..+...|+.+|+.+|++++.    .|++++++||+++|||+....           ....+.+........++||++|
T Consensus       166 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  245 (346)
T 4egb_A          166 TPLAPNSPYSSSKASADMIALAYYKTYQLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTD  245 (346)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETTSCCEECEEEHHH
T ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCCCCeEEeeEEHHH
Confidence            3445567899999999999874    699999999999999975321           0111222222333447899999


Q ss_pred             HHHHHHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCCCCC
Q 016901          288 VAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (380)
Q Consensus       288 vA~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~~  332 (380)
                      +|++++.+++++.  .+++||+++++..++.|+++.+.+.+|...
T Consensus       246 va~a~~~~~~~~~--~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~  288 (346)
T 4egb_A          246 HCSAIDVVLHKGR--VGEVYNIGGNNEKTNVEVVEQIITLLGKTK  288 (346)
T ss_dssp             HHHHHHHHHHHCC--TTCEEEECCSCCEEHHHHHHHHHHHHTCCG
T ss_pred             HHHHHHHHHhcCC--CCCEEEECCCCceeHHHHHHHHHHHhCCCc
Confidence            9999999999866  488999999999999999999999998754

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=3e-33  Score=266.97  Aligned_cols=242  Identities=13%  Similarity=0.075  Sum_probs=185.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ++|+|||||||||||++++++|+++|++|++++|+.+......+.+....            ..+++++.+|++|.+++.
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~------------~~~~~~~~~Dl~d~~~~~   71 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKIT------------GKTPAFHETDVSDERALA   71 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHH------------SCCCEEECCCTTCHHHHH
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhc------------CCCceEEEeecCCHHHHH
Confidence            56799999999999999999999999999999998765544444333221            157899999999999999


Q ss_pred             HHhc--CCCEEEEccccCccc--cCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCC-----Cchhhhchhh
Q 016901          159 PALG--NASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNLFW  229 (380)
Q Consensus       159 ~a~~--~~d~Vi~~Ag~~~~~--~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~-----~~~~~~~~~~  229 (380)
                      ++++  ++|+||||||.....  ..+....+++|+.++.+++++|++.++++|||+||.+++...     .+..+..+..
T Consensus        72 ~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~  151 (341)
T 3enk_A           72 RIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPERSPIDETFPLSATN  151 (341)
T ss_dssp             HHHHHSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBCSCSSSSBCTTSCCBCSS
T ss_pred             HHHhccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEecCCCCCCCCCCCCCCCCC
Confidence            9997  899999999865321  123334578999999999999999999999999998774321     1123344567


Q ss_pred             HHHHHHHHHHHHHHH----C-CCCEEEEecCcccCCCccc--c--------------------cccceeecc------CC
Q 016901          230 GVLLWKRKAEEALIA----S-GLPYTIVRPGGMERPTDAY--K--------------------ETHNITLSQ------ED  276 (380)
Q Consensus       230 ~Y~~sK~~~E~~l~~----~-g~~~~ivRpg~v~gp~~~~--~--------------------~~~~~~~~~------~~  276 (380)
                      .|+.+|.++|++++.    . +++++++||+++|||+...  .                    ....+.+..      ..
T Consensus       152 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g  231 (341)
T 3enk_A          152 PYGQTKLMAEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDG  231 (341)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTS
T ss_pred             hhHHHHHHHHHHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCC
Confidence            899999999999874    3 5999999999999995311  0                    001111111      22


Q ss_pred             cccCCCCCHHHHHHHHHHHHhCCC-CccCcEEEEecCCCCCcchHHHHHHhcCCCCC
Q 016901          277 TLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (380)
Q Consensus       277 ~~~~~~i~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~~  332 (380)
                      ....+++|++|+|++++.++++.. ...+++||+++++..++.|+++.+.+++|...
T Consensus       232 ~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~  288 (341)
T 3enk_A          232 TGVRDYIHVVDLARGHIAALDALERRDASLTVNLGTGRGYSVLEVVRAFEKASGRAV  288 (341)
T ss_dssp             SCEECEEEHHHHHHHHHHHHHHHHHHTSCEEEEESCSCCEEHHHHHHHHHHHHCSCC
T ss_pred             CeeEeeEEHHHHHHHHHHHHHhhhcCCcceEEEeCCCCceeHHHHHHHHHHHhCCCc
Confidence            233468999999999999998731 13489999999999999999999999998754

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=100.00  E-value=5.5e-33  Score=249.06  Aligned_cols=210  Identities=21%  Similarity=0.313  Sum_probs=170.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCC-hhcHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK-RVQIEP  159 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d-~~~~~~  159 (380)
                      |+|||||||||||++++++|+++|++|++++|++++...                     ..+++++.+|++| .+++.+
T Consensus         1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---------------------~~~~~~~~~D~~d~~~~~~~   59 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQ---------------------YNNVKAVHFDVDWTPEEMAK   59 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCC---------------------CTTEEEEECCTTSCHHHHHT
T ss_pred             CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhh---------------------cCCceEEEecccCCHHHHHH
Confidence            479999999999999999999999999999999865321                     1579999999999 999999


Q ss_pred             HhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCC-CchhhhchhhHHHHHHHHH
Q 016901          160 ALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-FPAAILNLFWGVLLWKRKA  238 (380)
Q Consensus       160 a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~-~~~~~~~~~~~Y~~sK~~~  238 (380)
                      +++++|+||||||...      ...+++|+.++.+++++|++.++++|||+||.++.... ..+.+..+...|+.+|+.+
T Consensus        60 ~~~~~d~vi~~ag~~~------~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~e~~~~~~~~Y~~sK~~~  133 (219)
T 3dqp_A           60 QLHGMDAIINVSGSGG------KSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPEKWIGAGFDALKDYYIAKHFA  133 (219)
T ss_dssp             TTTTCSEEEECCCCTT------SSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCGGGCCSHHHHHTHHHHHHHHHH
T ss_pred             HHcCCCEEEECCcCCC------CCcEeEeHHHHHHHHHHHHHhCCCEEEEECcccccCCCcccccccccccHHHHHHHHH
Confidence            9999999999999654      23678899999999999999999999999998764321 1112344567899999999


Q ss_pred             HHHH-HHCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHHHHhCCCCccCcEEEEecCCCCCc
Q 016901          239 EEAL-IASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPL  317 (380)
Q Consensus       239 E~~l-~~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~~~~~~~~~ni~~~~~~s~  317 (380)
                      |+++ +..|+++++||||++||+...    ..+.+.   .....+++++|+|++++.++.++. ..+++||++++.    
T Consensus       134 e~~~~~~~~i~~~ilrp~~v~g~~~~----~~~~~~---~~~~~~i~~~Dva~~i~~~l~~~~-~~g~~~~i~~g~----  201 (219)
T 3dqp_A          134 DLYLTKETNLDYTIIQPGALTEEEAT----GLIDIN---DEVSASNTIGDVADTIKELVMTDH-SIGKVISMHNGK----  201 (219)
T ss_dssp             HHHHHHSCCCEEEEEEECSEECSCCC----SEEEES---SSCCCCEEHHHHHHHHHHHHTCGG-GTTEEEEEEECS----
T ss_pred             HHHHHhccCCcEEEEeCceEecCCCC----CccccC---CCcCCcccHHHHHHHHHHHHhCcc-ccCcEEEeCCCC----
Confidence            9999 779999999999999998532    122222   334478999999999999999876 568999999885    


Q ss_pred             chHHHHHHhcCC
Q 016901          318 TPMEELLAKIPS  329 (380)
Q Consensus       318 ~~~~e~~~~~~~  329 (380)
                      ..+.|++....+
T Consensus       202 ~~~~e~~~~~~~  213 (219)
T 3dqp_A          202 TAIKEALESLLE  213 (219)
T ss_dssp             EEHHHHHHTTTT
T ss_pred             ccHHHHHHHHHH
Confidence            455555554433

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=100.00  E-value=7.5e-33  Score=268.64  Aligned_cols=232  Identities=15%  Similarity=0.035  Sum_probs=182.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ++|+|||||||||||++|+++|+++|++|++++|+..+....                   ...+++++.+|++|.+++.
T Consensus        28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------------------~~~~v~~~~~Dl~d~~~~~   88 (379)
T 2c5a_A           28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE-------------------DMFCDEFHLVDLRVMENCL   88 (379)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG-------------------GGTCSEEEECCTTSHHHHH
T ss_pred             cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh-------------------ccCCceEEECCCCCHHHHH
Confidence            568999999999999999999999999999999987542211                   0157899999999999999


Q ss_pred             HHhcCCCEEEEccccCccc---cCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCC----------chh--
Q 016901          159 PALGNASVVICCIGASEKE---VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF----------PAA--  223 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~~~---~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~----------~~~--  223 (380)
                      ++++++|+||||||.....   ..++...+++|+.++.+++++|++.++++|||+||.+++....          +..  
T Consensus        89 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~  168 (379)
T 2c5a_A           89 KVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAW  168 (379)
T ss_dssp             HHHTTCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGS
T ss_pred             HHhCCCCEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCCccCCCcCcccCC
Confidence            9999999999999965321   2334455789999999999999999999999999987743210          111  


Q ss_pred             hhchhhHHHHHHHHHHHHHHH----CCCCEEEEecCcccCCCccccc---------------ccc-eeeccCCcccCCCC
Q 016901          224 ILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE---------------THN-ITLSQEDTLFGGQV  283 (380)
Q Consensus       224 ~~~~~~~Y~~sK~~~E~~l~~----~g~~~~ivRpg~v~gp~~~~~~---------------~~~-~~~~~~~~~~~~~i  283 (380)
                      +..+...|+.+|+.+|.+++.    .|+++++||||++|||+.....               ... +.+.........++
T Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i  248 (379)
T 2c5a_A          169 PAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFT  248 (379)
T ss_dssp             SBCCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCE
T ss_pred             CCCCCChhHHHHHHHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEE
Confidence            234566899999999998863    6999999999999999753210               011 22222222334789


Q ss_pred             CHHHHHHHHHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCCCCC
Q 016901          284 SNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (380)
Q Consensus       284 ~~~DvA~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~~  332 (380)
                      |++|+|++++.+++++.   +++||+++++..++.|+++.+.++++...
T Consensus       249 ~v~Dva~ai~~~l~~~~---~~~~ni~~~~~~s~~e~~~~i~~~~g~~~  294 (379)
T 2c5a_A          249 FIDECVEGVLRLTKSDF---REPVNIGSDEMVSMNEMAEMVLSFEEKKL  294 (379)
T ss_dssp             EHHHHHHHHHHHHHSSC---CSCEEECCCCCEEHHHHHHHHHHTTTCCC
T ss_pred             EHHHHHHHHHHHhhccC---CCeEEeCCCCccCHHHHHHHHHHHhCCCC
Confidence            99999999999998763   78999999999999999999999998653

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=100.00  E-value=1.8e-33  Score=265.15  Aligned_cols=230  Identities=16%  Similarity=0.083  Sum_probs=180.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      |+|||||||||||++|+++|+++|++|++++|+.+......                   ..+++++.+|++|.+ +.++
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------------------~~~~~~~~~Dl~d~~-~~~~   60 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV-------------------NPSAELHVRDLKDYS-WGAG   60 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS-------------------CTTSEEECCCTTSTT-TTTT
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc-------------------CCCceEEECccccHH-HHhh
Confidence            57999999999999999999999999999999875432211                   167899999999998 8888


Q ss_pred             hcCCCEEEEccccCcc--ccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCC-----CchhhhchhhHHHH
Q 016901          161 LGNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNLFWGVLL  233 (380)
Q Consensus       161 ~~~~d~Vi~~Ag~~~~--~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~-----~~~~~~~~~~~Y~~  233 (380)
                      +++ |+||||||....  ...++...+++|+.|+.+++++|++.++++|||+||.+++...     .+..+..+.+.|+.
T Consensus        61 ~~~-d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~  139 (312)
T 3ko8_A           61 IKG-DVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADVIPTPEEEPYKPISVYGA  139 (312)
T ss_dssp             CCC-SEEEECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHH
T ss_pred             cCC-CEEEECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCChHHH
Confidence            888 999999985422  2233445578999999999999999999999999998774322     12233455678999


Q ss_pred             HHHHHHHHHHH----CCCCEEEEecCcccCCCcccc-----------cccceeeccCCcccCCCCCHHHHHHHHHHHHhC
Q 016901          234 WKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK-----------ETHNITLSQEDTLFGGQVSNLQVAELLACMAKN  298 (380)
Q Consensus       234 sK~~~E~~l~~----~g~~~~ivRpg~v~gp~~~~~-----------~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~  298 (380)
                      +|..+|++++.    .|+++++|||+++|||+....           ....+..........+++|++|+|++++.++++
T Consensus       140 sK~~~e~~~~~~~~~~g~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~  219 (312)
T 3ko8_A          140 AKAAGEVMCATYARLFGVRCLAVRYANVVGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKK  219 (312)
T ss_dssp             HHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCSSHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCEEEEeeccccCcCCCCChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHh
Confidence            99999998864    699999999999999974321           001111222223344789999999999999987


Q ss_pred             ---CCCccCcEEEEecCCCCCcchHHHHHHhcCCCCC
Q 016901          299 ---RSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (380)
Q Consensus       299 ---~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~~  332 (380)
                         +. ..+++||+++++..++.|+++.+.+.+|..+
T Consensus       220 ~~~~~-~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~  255 (312)
T 3ko8_A          220 FEEMD-APFLALNVGNVDAVRVLDIAQIVAEVLGLRP  255 (312)
T ss_dssp             HHHSC-CSEEEEEESCSSCEEHHHHHHHHHHHHTCCC
T ss_pred             ccccC-CCCcEEEEcCCCceeHHHHHHHHHHHhCCCC
Confidence               33 4588999999999999999999999998765

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=100.00  E-value=2.5e-33  Score=261.39  Aligned_cols=226  Identities=18%  Similarity=0.138  Sum_probs=179.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ++|+||||| +||||++|+++|+++|++|++++|+.++.                       ..+++++.+|++|.+++.
T Consensus         2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----------------------~~~~~~~~~Dl~d~~~~~   57 (286)
T 3gpi_A            2 SLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM-----------------------PAGVQTLIADVTRPDTLA   57 (286)
T ss_dssp             CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC-----------------------CTTCCEEECCTTCGGGCT
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc-----------------------ccCCceEEccCCChHHHH
Confidence            457899999 59999999999999999999999987542                       167899999999999999


Q ss_pred             HHhcC-CCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCC-----CchhhhchhhHHH
Q 016901          159 PALGN-ASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNLFWGVL  232 (380)
Q Consensus       159 ~a~~~-~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~-----~~~~~~~~~~~Y~  232 (380)
                      +++++ +|+|||+||...   .++...+++|+.++.+++++|++.++++|||+||.+++...     .+..+..+.+.|+
T Consensus        58 ~~~~~~~d~vih~a~~~~---~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~  134 (286)
T 3gpi_A           58 SIVHLRPEILVYCVAASE---YSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSG  134 (286)
T ss_dssp             TGGGGCCSEEEECHHHHH---HC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCCCCSSEECTTSCCCCCSHHH
T ss_pred             HhhcCCCCEEEEeCCCCC---CCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcCCCCCCCCCCCCCCCCChhh
Confidence            99987 999999998643   33456678999999999999999999999999998875432     1223344567899


Q ss_pred             HHHHHHHHHHHHCCCCEEEEecCcccCCCcccc--cccceeeccCCcccCCCCCHHHHHHHHHHHHhCCC-CccCcEEEE
Q 016901          233 LWKRKAEEALIASGLPYTIVRPGGMERPTDAYK--ETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEV  309 (380)
Q Consensus       233 ~sK~~~E~~l~~~g~~~~ivRpg~v~gp~~~~~--~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~~-~~~~~~~ni  309 (380)
                      .+|+.+|++ ++. +++++|||+++|||+....  ...............+++|++|+|++++.+++++. ...+++||+
T Consensus       135 ~sK~~~E~~-~~~-~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~  212 (286)
T 3gpi_A          135 KRMLEAEAL-LAA-YSSTILRFSGIYGPGRLRMIRQAQTPEQWPARNAWTNRIHRDDGAAFIAYLIQQRSHAVPERLYIV  212 (286)
T ss_dssp             HHHHHHHHH-GGG-SSEEEEEECEEEBTTBCHHHHHTTCGGGSCSSBCEECEEEHHHHHHHHHHHHHHHTTSCCCSEEEE
T ss_pred             HHHHHHHHH-Hhc-CCeEEEecccccCCCchhHHHHHHhcccCCCcCceeEEEEHHHHHHHHHHHHhhhccCCCCceEEE
Confidence            999999999 777 9999999999999976421  00001111223334468999999999999999841 145899999


Q ss_pred             ecCCCCCcchHHHHHHhcCCCCCC
Q 016901          310 IAETTAPLTPMEELLAKIPSQRAE  333 (380)
Q Consensus       310 ~~~~~~s~~~~~e~~~~~~~~~~~  333 (380)
                      ++++..++.|+++.+.+.+|....
T Consensus       213 ~~~~~~s~~e~~~~i~~~~g~~~~  236 (286)
T 3gpi_A          213 TDNQPLPVHDLLRWLADRQGIAYP  236 (286)
T ss_dssp             CCSCCEEHHHHHHHHHHHTTCCCC
T ss_pred             eCCCCCCHHHHHHHHHHHcCCCCC
Confidence            999999999999999999987543

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=100.00  E-value=5.9e-33  Score=262.03  Aligned_cols=229  Identities=14%  Similarity=0.065  Sum_probs=176.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC-chhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS-VQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ||+|||||||||||++|+++|+++| .|+++++. ......                    ...+++++.+|++| +++.
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g-~~v~~~~~~~~~~~~--------------------~~~~~~~~~~Dl~~-~~~~   58 (313)
T 3ehe_A            1 MSLIVVTGGAGFIGSHVVDKLSESN-EIVVIDNLSSGNEEF--------------------VNEAARLVKADLAA-DDIK   58 (313)
T ss_dssp             --CEEEETTTSHHHHHHHHHHTTTS-CEEEECCCSSCCGGG--------------------SCTTEEEECCCTTT-SCCH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCC-CEEEEEcCCCCChhh--------------------cCCCcEEEECcCCh-HHHH
Confidence            3689999999999999999999999 55555543 322111                    01578999999999 9999


Q ss_pred             HHhcCCCEEEEccccCcc--ccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCC-----chhhhchhhHH
Q 016901          159 PALGNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF-----PAAILNLFWGV  231 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~~--~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~-----~~~~~~~~~~Y  231 (380)
                      ++++++|+|||+|+....  ...++...+++|+.|+.+++++|++.++++|||+||.+++....     +..+..+...|
T Consensus        59 ~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y  138 (313)
T 3ehe_A           59 DYLKGAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLY  138 (313)
T ss_dssp             HHHTTCSEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSHH
T ss_pred             HHhcCCCEEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCHH
Confidence            999999999999985432  22344555889999999999999999999999999987753211     12234456789


Q ss_pred             HHHHHHHHHHHH----HCCCCEEEEecCcccCCCcccc-----------cccceeeccCCcccCCCCCHHHHHHHHHHHH
Q 016901          232 LLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYK-----------ETHNITLSQEDTLFGGQVSNLQVAELLACMA  296 (380)
Q Consensus       232 ~~sK~~~E~~l~----~~g~~~~ivRpg~v~gp~~~~~-----------~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l  296 (380)
                      +.+|..+|.+++    +.|++++++||+++|||+....           ....+.+........+++|++|+|++++.++
T Consensus       139 ~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~  218 (313)
T 3ehe_A          139 GASKLACEALIESYCHTFDMQAWIYRFANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGL  218 (313)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCEEEEEECSCEESTTCCCSHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHhcCCCEEEEeeccccCcCCCcChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHh
Confidence            999999999886    3799999999999999975321           0112222233334457899999999999999


Q ss_pred             hCCCCccCcEEEEecCCCCCcchHHHHHHhcCCCCC
Q 016901          297 KNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (380)
Q Consensus       297 ~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~~  332 (380)
                      +..  ..+++||+++++..++.|+++.+.+.+|..+
T Consensus       219 ~~~--~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~  252 (313)
T 3ehe_A          219 RGD--ERVNIFNIGSEDQIKVKRIAEIVCEELGLSP  252 (313)
T ss_dssp             TCC--SSEEEEECCCSCCEEHHHHHHHHHHHTTCCC
T ss_pred             ccC--CCCceEEECCCCCeeHHHHHHHHHHHhCCCC
Confidence            843  3489999999999999999999999998764

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=100.00  E-value=8.6e-33  Score=266.37  Aligned_cols=242  Identities=14%  Similarity=0.024  Sum_probs=182.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHH--CCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLK--LGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~--~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~  155 (380)
                      +++|+|||||||||||++|+++|++  +|++|++++|+...........+.+.  .    .......+++++.+|++|++
T Consensus         8 ~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~~~~Dl~d~~   81 (362)
T 3sxp_A            8 LENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLG--H----FKNLIGFKGEVIAADINNPL   81 (362)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCC--C----GGGGTTCCSEEEECCTTCHH
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhh--h----hhhccccCceEEECCCCCHH
Confidence            4678999999999999999999999  99999999997652111100000000  0    00001246799999999999


Q ss_pred             cHHHH-hcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCC----CchhhhchhhH
Q 016901          156 QIEPA-LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG----FPAAILNLFWG  230 (380)
Q Consensus       156 ~~~~a-~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~----~~~~~~~~~~~  230 (380)
                      ++.++ ..++|+||||||.......++...+++|+.|+.+++++|++.+++ |||+||.+++...    .+..+..+.+.
T Consensus        82 ~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS~~vyg~~~~~~~E~~~~~p~~~  160 (362)
T 3sxp_A           82 DLRRLEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASSAGVYGNTKAPNVVGKNESPENV  160 (362)
T ss_dssp             HHHHHTTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEEGGGGCSCCSSBCTTSCCCCSSH
T ss_pred             HHHHhhccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCcHHHhCCCCCCCCCCCCCCCCCh
Confidence            99999 889999999999765544555667899999999999999999986 9999997764322    12223456678


Q ss_pred             HHHHHHHHHHHHHHCC--CCEEEEecCcccCCCccccc---------------ccceeeccCCcccCCCCCHHHHHHHHH
Q 016901          231 VLLWKRKAEEALIASG--LPYTIVRPGGMERPTDAYKE---------------THNITLSQEDTLFGGQVSNLQVAELLA  293 (380)
Q Consensus       231 Y~~sK~~~E~~l~~~g--~~~~ivRpg~v~gp~~~~~~---------------~~~~~~~~~~~~~~~~i~~~DvA~~i~  293 (380)
                      |+.+|+++|.+++...  +++++|||+++|||+.....               .....+........+++|++|+|++++
T Consensus       161 Y~~sK~~~E~~~~~~~~~~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ai~  240 (362)
T 3sxp_A          161 YGFSKLCMDEFVLSHSNDNVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQANV  240 (362)
T ss_dssp             HHHHHHHHHHHHHHTTTTSCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEECEEHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHhccCCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEccEEHHHHHHHHH
Confidence            9999999999999755  88999999999999764221               011111122223346899999999999


Q ss_pred             HHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCC
Q 016901          294 CMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPS  329 (380)
Q Consensus       294 ~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~  329 (380)
                      .+++++.  .+ +||+++++..++.|+++.+.+.++
T Consensus       241 ~~~~~~~--~g-~~~i~~~~~~s~~e~~~~i~~~~g  273 (362)
T 3sxp_A          241 KAMKAQK--SG-VYNVGYSQARSYNEIVSILKEHLG  273 (362)
T ss_dssp             HHTTCSS--CE-EEEESCSCEEEHHHHHHHHHHHHC
T ss_pred             HHHhcCC--CC-EEEeCCCCCccHHHHHHHHHHHcC
Confidence            9998865  25 999999999999999999999998

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=100.00  E-value=2.1e-32  Score=262.52  Aligned_cols=242  Identities=13%  Similarity=0.020  Sum_probs=183.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchh----HHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCCh
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR----AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~  154 (380)
                      ++|+|||||||||||++|+++|+++|++|++++|+...    ...+.+.+...            ...+++++.+|++|.
T Consensus        26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~Dl~d~   93 (352)
T 1sb8_A           26 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEK------------QWSNFKFIQGDIRNL   93 (352)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHH------------HHTTEEEEECCTTSH
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccc------------cCCceEEEECCCCCH
Confidence            56899999999999999999999999999999997642    22222111000            015789999999999


Q ss_pred             hcHHHHhcCCCEEEEccccCcc--ccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCC-----chhhhch
Q 016901          155 VQIEPALGNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF-----PAAILNL  227 (380)
Q Consensus       155 ~~~~~a~~~~d~Vi~~Ag~~~~--~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~-----~~~~~~~  227 (380)
                      +++.++++++|+||||||....  ...++...+++|+.++.+++++|++.++++|||+||.+++....     +..+..+
T Consensus        94 ~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~E~~~~~~  173 (352)
T 1sb8_A           94 DDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKP  173 (352)
T ss_dssp             HHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCC
T ss_pred             HHHHHHhcCCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCCCCCCCCCCCCCCC
Confidence            9999999999999999996532  11234456789999999999999999999999999987743221     1222345


Q ss_pred             hhHHHHHHHHHHHHHHH----CCCCEEEEecCcccCCCccccc---------------ccceeeccCCcccCCCCCHHHH
Q 016901          228 FWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE---------------THNITLSQEDTLFGGQVSNLQV  288 (380)
Q Consensus       228 ~~~Y~~sK~~~E~~l~~----~g~~~~ivRpg~v~gp~~~~~~---------------~~~~~~~~~~~~~~~~i~~~Dv  288 (380)
                      ...|+.+|+.+|.+++.    .|+++++||||++|||+.....               ...+.+........++++++|+
T Consensus       174 ~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dv  253 (352)
T 1sb8_A          174 LSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENT  253 (352)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHH
T ss_pred             CChhHHHHHHHHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHH
Confidence            66899999999998863    5999999999999999753210               0011111222233468999999


Q ss_pred             HHHHHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcC---CCCC
Q 016901          289 AELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIP---SQRA  332 (380)
Q Consensus       289 A~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~---~~~~  332 (380)
                      |++++.++.+.....+++||+++++..++.|+++.+.+.+   |...
T Consensus       254 a~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~g~~~  300 (352)
T 1sb8_A          254 VQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSY  300 (352)
T ss_dssp             HHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCC
T ss_pred             HHHHHHHHhccccCCCceEEeCCCCCccHHHHHHHHHHHHHhcCCCC
Confidence            9999999987432458999999999999999999999998   7543

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.98  E-value=2.9e-32  Score=260.37  Aligned_cols=239  Identities=14%  Similarity=0.088  Sum_probs=178.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCc-hhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV-QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ||+|||||||||||++++++|+++|++|++++|+. .........+..              ..+++++.+|++|.+++.
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~--------------~~~~~~~~~Dl~d~~~~~   66 (347)
T 1orr_A            1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS--------------LGNFEFVHGDIRNKNDVT   66 (347)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT--------------TCCCEEEECCTTCHHHHH
T ss_pred             CcEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhcc--------------CCceEEEEcCCCCHHHHH
Confidence            36899999999999999999999999999999853 222221121211              146899999999999999


Q ss_pred             HHhcC--CCEEEEccccCccc--cCCCCCcchhhHHHHHHHHHHHHHcCCC-EEEEEccCCCCCCCC-------------
Q 016901          159 PALGN--ASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVSSLGTNKFGF-------------  220 (380)
Q Consensus       159 ~a~~~--~d~Vi~~Ag~~~~~--~~~~~~~~~~nv~g~~~ll~a~~~~~v~-r~V~~SS~~~~~~~~-------------  220 (380)
                      +++++  +|+||||||.....  ..++...+++|+.|+.+++++|++.+++ +|||+||.+++....             
T Consensus        67 ~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~  146 (347)
T 1orr_A           67 RLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTC  146 (347)
T ss_dssp             HHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEE
T ss_pred             HHHhccCCCEEEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCcccccccccc
Confidence            99987  99999999965321  2244456889999999999999998886 999999987643210             


Q ss_pred             --------chhhhchhhHHHHHHHHHHHHHHH----CCCCEEEEecCcccCCCccccc--------------cc-----c
Q 016901          221 --------PAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE--------------TH-----N  269 (380)
Q Consensus       221 --------~~~~~~~~~~Y~~sK~~~E~~l~~----~g~~~~ivRpg~v~gp~~~~~~--------------~~-----~  269 (380)
                              +..+..+...|+.+|+.+|.+++.    .|+++++||||++|||+.....              ..     .
T Consensus       147 ~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (347)
T 1orr_A          147 VDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKP  226 (347)
T ss_dssp             TTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCC
T ss_pred             cccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCC
Confidence                    111234567899999999999874    4999999999999999642110              00     1


Q ss_pred             eeeccCCcccCCCCCHHHHHHHHHHHHhCCCCccCcEEEEecCC--CCCcchHHHHHHhcCCCCC
Q 016901          270 ITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAET--TAPLTPMEELLAKIPSQRA  332 (380)
Q Consensus       270 ~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~~~~~~~~~ni~~~~--~~s~~~~~e~~~~~~~~~~  332 (380)
                      +..........++++++|+|++++.++++.....+++||++++.  ..|+.|+++.+.++++...
T Consensus       227 ~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~~~  291 (347)
T 1orr_A          227 FTISGNGKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDM  291 (347)
T ss_dssp             EEEESSSCCEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCC
T ss_pred             eEEecCCcceEeeEEHHHHHHHHHHHHhccccCCCCEEEeCCCCCCCccHHHHHHHHHHHhCCCC
Confidence            11111222233589999999999999986322457899999987  3789999999999988653

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.98  E-value=3.3e-32  Score=257.51  Aligned_cols=228  Identities=11%  Similarity=0.082  Sum_probs=178.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      +.|+|||||||||||++|+++|+++|++|++++|+... ..                      -+++++.+|++|++++.
T Consensus        11 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----------------------l~~~~~~~Dl~d~~~~~   67 (321)
T 2pk3_A           11 GSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----------------------PNVEMISLDIMDSQRVK   67 (321)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----------------------TTEEEEECCTTCHHHHH
T ss_pred             CcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----------------------ceeeEEECCCCCHHHHH
Confidence            56899999999999999999999999999999998653 10                      15889999999999999


Q ss_pred             HHhcC--CCEEEEccccCccc--cCCCCCcchhhHHHHHHHHHHHHHc-CCCEEEEEccCCCCCCC-------Cchhhhc
Q 016901          159 PALGN--ASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIA-KVNHFIMVSSLGTNKFG-------FPAAILN  226 (380)
Q Consensus       159 ~a~~~--~d~Vi~~Ag~~~~~--~~~~~~~~~~nv~g~~~ll~a~~~~-~v~r~V~~SS~~~~~~~-------~~~~~~~  226 (380)
                      +++++  +|+||||||.....  ..++...+++|+.|+.+++++|.+. ++++|||+||.+++...       .+..+..
T Consensus        68 ~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~  147 (321)
T 2pk3_A           68 KVISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEENQLR  147 (321)
T ss_dssp             HHHHHHCCSEEEECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCB
T ss_pred             HHHHhcCCCEEEEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCCCCCC
Confidence            99975  99999999965421  2244556889999999999999876 58999999998764321       1112334


Q ss_pred             hhhHHHHHHHHHHHHHHH----CCCCEEEEecCcccCCCccccc----------c---c---ceeeccCCcccCCCCCHH
Q 016901          227 LFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE----------T---H---NITLSQEDTLFGGQVSNL  286 (380)
Q Consensus       227 ~~~~Y~~sK~~~E~~l~~----~g~~~~ivRpg~v~gp~~~~~~----------~---~---~~~~~~~~~~~~~~i~~~  286 (380)
                      +...|+.+|+++|.+++.    .|+++++|||+++|||+.....          .   +   .+...........+++++
T Consensus       148 ~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~  227 (321)
T 2pk3_A          148 PMSPYGVSKASVGMLARQYVKAYGMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVR  227 (321)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHH
T ss_pred             CCCccHHHHHHHHHHHHHHHHHcCCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHH
Confidence            567899999999999875    4999999999999999753210          0   1   111111222234589999


Q ss_pred             HHHHHHHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCCCC
Q 016901          287 QVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (380)
Q Consensus       287 DvA~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~  331 (380)
                      |+|++++.+++++.  .+++||+++++..++.|+++.+.+.++..
T Consensus       228 Dva~a~~~~~~~~~--~g~~~~i~~~~~~s~~e~~~~i~~~~g~~  270 (321)
T 2pk3_A          228 DIVQAYWLLSQYGK--TGDVYNVCSGIGTRIQDVLDLLLAMANVK  270 (321)
T ss_dssp             HHHHHHHHHHHHCC--TTCEEEESCSCEEEHHHHHHHHHHHSSSC
T ss_pred             HHHHHHHHHHhCCC--CCCeEEeCCCCCeeHHHHHHHHHHHhCCC
Confidence            99999999998763  37899999999999999999999998864

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.98  E-value=1.8e-31  Score=248.54  Aligned_cols=214  Identities=19%  Similarity=0.219  Sum_probs=175.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHC--CCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKL--GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~--G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      |+|||||||||||++++++|+++  |++|++++|++++...+..                   .+++++.+|++|++++.
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~-------------------~~~~~~~~D~~d~~~l~   61 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLAD-------------------QGVEVRHGDYNQPESLQ   61 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHH-------------------TTCEEEECCTTCHHHHH
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhh-------------------cCCeEEEeccCCHHHHH
Confidence            46999999999999999999999  9999999999876654432                   57889999999999999


Q ss_pred             HHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCCchhhhchhhHHHHHHHHH
Q 016901          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKA  238 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~~Y~~sK~~~  238 (380)
                      ++++++|+||||||...      .  .++|+.++.+++++|++.+++||||+||.+++.        .+ ..|+.+|..+
T Consensus        62 ~~~~~~d~vi~~a~~~~------~--~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~--------~~-~~y~~~K~~~  124 (287)
T 2jl1_A           62 KAFAGVSKLLFISGPHY------D--NTLLIVQHANVVKAARDAGVKHIAYTGYAFAEE--------SI-IPLAHVHLAT  124 (287)
T ss_dssp             HHTTTCSEEEECCCCCS------C--HHHHHHHHHHHHHHHHHTTCSEEEEEEETTGGG--------CC-STHHHHHHHH
T ss_pred             HHHhcCCEEEEcCCCCc------C--chHHHHHHHHHHHHHHHcCCCEEEEECCCCCCC--------CC-CchHHHHHHH
Confidence            99999999999998521      1  167999999999999999999999999987731        11 2699999999


Q ss_pred             HHHHHHCCCCEEEEecCcccCCC-cccc----cccceeeccCCcccCCCCCHHHHHHHHHHHHhCCCCccCcEEEEecCC
Q 016901          239 EEALIASGLPYTIVRPGGMERPT-DAYK----ETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAET  313 (380)
Q Consensus       239 E~~l~~~g~~~~ivRpg~v~gp~-~~~~----~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~~~~~~~~~ni~~~~  313 (380)
                      |+++++.|++++++|||+++|+. ..+.    .........+ .....+++++|+|++++.+++++. ..+++||+++++
T Consensus       125 E~~~~~~~~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~Dva~~~~~~~~~~~-~~g~~~~i~~~~  202 (287)
T 2jl1_A          125 EYAIRTTNIPYTFLRNALYTDFFVNEGLRASTESGAIVTNAG-SGIVNSVTRNELALAAATVLTEEG-HENKTYNLVSNQ  202 (287)
T ss_dssp             HHHHHHTTCCEEEEEECCBHHHHSSGGGHHHHHHTEEEESCT-TCCBCCBCHHHHHHHHHHHHTSSS-CTTEEEEECCSS
T ss_pred             HHHHHHcCCCeEEEECCEeccccchhhHHHHhhCCceeccCC-CCccCccCHHHHHHHHHHHhcCCC-CCCcEEEecCCC
Confidence            99999999999999999998764 2111    0111122222 223478999999999999998865 457899999999


Q ss_pred             CCCcchHHHHHHhcCCCCC
Q 016901          314 TAPLTPMEELLAKIPSQRA  332 (380)
Q Consensus       314 ~~s~~~~~e~~~~~~~~~~  332 (380)
                      ..|+.|+++.+.+.+|...
T Consensus       203 ~~s~~e~~~~i~~~~g~~~  221 (287)
T 2jl1_A          203 PWTFDELAQILSEVSGKKV  221 (287)
T ss_dssp             CBCHHHHHHHHHHHHSSCC
T ss_pred             cCCHHHHHHHHHHHHCCcc
Confidence            9999999999999998753

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.98  E-value=6.5e-32  Score=257.14  Aligned_cols=236  Identities=11%  Similarity=0.030  Sum_probs=178.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCCch--hHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCCh
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQ--RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G--~~V~~l~R~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~  154 (380)
                      ++|+|||||||||||++++++|+++|  ++|++++|+..  ..+.+.               ......+++++.+|++|.
T Consensus         2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~---------------~~~~~~~~~~~~~Dl~d~   66 (336)
T 2hun_A            2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLK---------------DLEDDPRYTFVKGDVADY   66 (336)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGT---------------TTTTCTTEEEEECCTTCH
T ss_pred             CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHh---------------hhccCCceEEEEcCCCCH
Confidence            35789999999999999999999997  89999998642  111110               000125789999999999


Q ss_pred             hcHHHHhcCCCEEEEccccCcc--ccCCCCCcchhhHHHHHHHHHHHHHcCC-CEEEEEccCCCCCCC-----Cchhhhc
Q 016901          155 VQIEPALGNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKV-NHFIMVSSLGTNKFG-----FPAAILN  226 (380)
Q Consensus       155 ~~~~~a~~~~d~Vi~~Ag~~~~--~~~~~~~~~~~nv~g~~~ll~a~~~~~v-~r~V~~SS~~~~~~~-----~~~~~~~  226 (380)
                      +++.+++.++|+||||||....  ...++...+++|+.|+.+++++|.+.+. ++|||+||.+++...     .+..+..
T Consensus        67 ~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~  146 (336)
T 2hun_A           67 ELVKELVRKVDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTENDRLM  146 (336)
T ss_dssp             HHHHHHHHTCSEEEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCBCTTBCCC
T ss_pred             HHHHHHhhCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCCcCCCCCCC
Confidence            9999999999999999996532  1234455688999999999999998875 799999998764321     1122334


Q ss_pred             hhhHHHHHHHHHHHHHHH----CCCCEEEEecCcccCCCccccc-----------ccceeeccCCcccCCCCCHHHHHHH
Q 016901          227 LFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE-----------THNITLSQEDTLFGGQVSNLQVAEL  291 (380)
Q Consensus       227 ~~~~Y~~sK~~~E~~l~~----~g~~~~ivRpg~v~gp~~~~~~-----------~~~~~~~~~~~~~~~~i~~~DvA~~  291 (380)
                      +...|+.+|..+|.+++.    .|+++++|||+++|||+.....           ...+.+.........++|++|+|++
T Consensus       147 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~  226 (336)
T 2hun_A          147 PSSPYSATKAASDMLVLGWTRTYNLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRA  226 (336)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHTTCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHH
T ss_pred             CCCccHHHHHHHHHHHHHHHHHhCCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHH
Confidence            566899999999998864    7999999999999999753110           0111111222233468999999999


Q ss_pred             HHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCCCC
Q 016901          292 LACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (380)
Q Consensus       292 i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~  331 (380)
                      ++.+++++.  .+++||++++...++.|+++.+.+.++..
T Consensus       227 ~~~~~~~~~--~g~~~~v~~~~~~s~~e~~~~i~~~~g~~  264 (336)
T 2hun_A          227 IELVLLKGE--SREIYNISAGEEKTNLEVVKIILRLMGKG  264 (336)
T ss_dssp             HHHHHHHCC--TTCEEEECCSCEECHHHHHHHHHHHTTCC
T ss_pred             HHHHHhCCC--CCCEEEeCCCCcccHHHHHHHHHHHhCCC
Confidence            999997654  47899999999999999999999998864

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.98  E-value=3.6e-32  Score=260.17  Aligned_cols=234  Identities=16%  Similarity=0.063  Sum_probs=179.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHC--CCeEEEEeCCchh--HHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKL--GFRVRAGVRSVQR--AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~--G~~V~~l~R~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~  155 (380)
                      +|+|||||||||||++++++|+++  |++|++++|+...  ...+    ..+            ...+++++.+|++|.+
T Consensus         4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~----~~~------------~~~~~~~~~~Dl~d~~   67 (348)
T 1oc2_A            4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANL----EAI------------LGDRVELVVGDIADAE   67 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGT----GGG------------CSSSEEEEECCTTCHH
T ss_pred             CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHH----hhh------------ccCCeEEEECCCCCHH
Confidence            579999999999999999999999  8999999997531  1110    000            0157899999999999


Q ss_pred             cHHHHhcCCCEEEEccccCcc--ccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCC--------------
Q 016901          156 QIEPALGNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG--------------  219 (380)
Q Consensus       156 ~~~~a~~~~d~Vi~~Ag~~~~--~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~--------------  219 (380)
                      ++.++++++|+||||||....  ...++...+++|+.|+.+++++|.+.++ +|||+||.+++...              
T Consensus        68 ~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~  146 (348)
T 1oc2_A           68 LVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPG  146 (348)
T ss_dssp             HHHHHHTTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTT
T ss_pred             HHHHHhhcCCEEEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCC-eEEEecccceeCCCcccccccccccccC
Confidence            999999999999999996532  1234455688999999999999999888 99999998764221              


Q ss_pred             ---CchhhhchhhHHHHHHHHHHHHHHH----CCCCEEEEecCcccCCCccccc-----------ccceeeccCCcccCC
Q 016901          220 ---FPAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE-----------THNITLSQEDTLFGG  281 (380)
Q Consensus       220 ---~~~~~~~~~~~Y~~sK~~~E~~l~~----~g~~~~ivRpg~v~gp~~~~~~-----------~~~~~~~~~~~~~~~  281 (380)
                         .+..+..+...|+.+|+.+|.+++.    .|+++++|||+++|||+.....           .....+.........
T Consensus       147 ~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (348)
T 1oc2_A          147 EKFTAETNYNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRD  226 (348)
T ss_dssp             SSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEE
T ss_pred             CCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCceEecCCCceEe
Confidence               1111334556899999999998864    5999999999999999753110           001111122223346


Q ss_pred             CCCHHHHHHHHHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCCCCC
Q 016901          282 QVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (380)
Q Consensus       282 ~i~~~DvA~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~~  332 (380)
                      ++|++|+|++++.+++++.  .+++||++++...++.|+++.+.+.++...
T Consensus       227 ~i~v~Dva~~~~~~~~~~~--~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~  275 (348)
T 1oc2_A          227 WIHTNDHSTGVWAILTKGR--MGETYLIGADGEKNNKEVLELILEKMGQPK  275 (348)
T ss_dssp             CEEHHHHHHHHHHHHHHCC--TTCEEEECCSCEEEHHHHHHHHHHHTTCCT
T ss_pred             eEEHHHHHHHHHHHhhCCC--CCCeEEeCCCCCCCHHHHHHHHHHHhCCCc
Confidence            8999999999999998653  478999999999999999999999988653

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.98  E-value=3.9e-32  Score=258.02  Aligned_cols=233  Identities=17%  Similarity=0.103  Sum_probs=178.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      ||+|||||||||||++++++|+++|++|++++|+.......                   ...+++++.+|++|.+++.+
T Consensus         1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------------------~~~~~~~~~~D~~~~~~~~~   61 (330)
T 2c20_A            1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDA-------------------ITEGAKFYNGDLRDKAFLRD   61 (330)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGG-------------------SCTTSEEEECCTTCHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchhh-------------------cCCCcEEEECCCCCHHHHHH
Confidence            46899999999999999999999999999999976432110                   01368899999999999999


Q ss_pred             Hhc--CCCEEEEccccCccc--cCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCC-----CchhhhchhhH
Q 016901          160 ALG--NASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNLFWG  230 (380)
Q Consensus       160 a~~--~~d~Vi~~Ag~~~~~--~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~-----~~~~~~~~~~~  230 (380)
                      +++  ++|+||||||.....  ..++...+++|+.++.+++++|++.++++|||+||.+++...     .+..+..+...
T Consensus        62 ~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~  141 (330)
T 2c20_A           62 VFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDVDLITEETMTNPTNT  141 (330)
T ss_dssp             HHHHSCEEEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGCSCSSSSBCTTSCCCCSSH
T ss_pred             HHhhcCCCEEEECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeCCCCCCCCCcCCCCCCCCh
Confidence            998  899999999865321  123445678999999999999999999999999998774321     11223345678


Q ss_pred             HHHHHHHHHHHHHH----CCCCEEEEecCcccCCCccc--c-----cc--------------cceeecc------CCccc
Q 016901          231 VLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAY--K-----ET--------------HNITLSQ------EDTLF  279 (380)
Q Consensus       231 Y~~sK~~~E~~l~~----~g~~~~ivRpg~v~gp~~~~--~-----~~--------------~~~~~~~------~~~~~  279 (380)
                      |+.+|..+|++++.    .|++++++||+++|||+...  .     ..              ..+.+..      .....
T Consensus       142 Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~  221 (330)
T 2c20_A          142 YGETKLAIEKMLHWYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCI  221 (330)
T ss_dssp             HHHHHHHHHHHHHHHHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCE
T ss_pred             HHHHHHHHHHHHHHHHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCcee
Confidence            99999999998874    59999999999999995210  0     00              0011111      11223


Q ss_pred             CCCCCHHHHHHHHHHHHhCCCCc-cCcEEEEecCCCCCcchHHHHHHhcCCCC
Q 016901          280 GGQVSNLQVAELLACMAKNRSLS-YCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (380)
Q Consensus       280 ~~~i~~~DvA~~i~~~l~~~~~~-~~~~~ni~~~~~~s~~~~~e~~~~~~~~~  331 (380)
                      .+++|++|+|++++.+++++... .+++||+++++..++.|+++.+.+.+|..
T Consensus       222 ~~~v~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~  274 (330)
T 2c20_A          222 RDYIHVEDLVAAHFLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNHE  274 (330)
T ss_dssp             ECEEEHHHHHHHHHHHHHHHHTTCCCEEEECCCTTCBCHHHHHHHHHHHTTSC
T ss_pred             EeeEeHHHHHHHHHHHHhccccCCCCCeEEeCCCCCccHHHHHHHHHHHhCCC
Confidence            36899999999999999865321 36899999999999999999999998864

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.97  E-value=1.3e-32  Score=258.88  Aligned_cols=226  Identities=14%  Similarity=0.087  Sum_probs=173.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++|+|||||||||||++|+++|+++|+      +....                        ...++++.+|++|++++
T Consensus         4 ~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~~------------------------~~~~~~~~~D~~d~~~~   53 (319)
T 4b8w_A            4 FQSMRILVTGGSGLVGKAIQKVVADGAG------LPGED------------------------WVFVSSKDADLTDTAQT   53 (319)
T ss_dssp             CCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTCE------------------------EEECCTTTCCTTSHHHH
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhcCC------ccccc------------------------ccccCceecccCCHHHH
Confidence            4678999999999999999999999998      11100                        03455668999999999


Q ss_pred             HHHhcC--CCEEEEccccCcc---ccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCC-----chh----
Q 016901          158 EPALGN--ASVVICCIGASEK---EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF-----PAA----  223 (380)
Q Consensus       158 ~~a~~~--~d~Vi~~Ag~~~~---~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~-----~~~----  223 (380)
                      .+++++  +|+|||||+....   ...++...+++|+.|+.+++++|++.+++||||+||.+++....     +..    
T Consensus        54 ~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~  133 (319)
T 4b8w_A           54 RALFEKVQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDETMIHNG  133 (319)
T ss_dssp             HHHHHHSCCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSCSSCCSSBCGGGGGBS
T ss_pred             HHHHhhcCCCEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcCCCCCCCccccccccC
Confidence            999986  9999999997532   22344455899999999999999999999999999987743211     111    


Q ss_pred             hhchh-hHHHHHHHHHHHHHHH----CCCCEEEEecCcccCCCcccc-------------------cccceeeccCCccc
Q 016901          224 ILNLF-WGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK-------------------ETHNITLSQEDTLF  279 (380)
Q Consensus       224 ~~~~~-~~Y~~sK~~~E~~l~~----~g~~~~ivRpg~v~gp~~~~~-------------------~~~~~~~~~~~~~~  279 (380)
                      +..+. .+|+.+|+.+|++++.    .|++++++||+++|||+....                   ....+.+.......
T Consensus       134 ~~~p~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  213 (319)
T 4b8w_A          134 PPHNSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPR  213 (319)
T ss_dssp             CCCSSSHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCE
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCee
Confidence            12222 3699999999998864    799999999999999976421                   01112222233334


Q ss_pred             CCCCCHHHHHHHHHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCCCCCC
Q 016901          280 GGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE  333 (380)
Q Consensus       280 ~~~i~~~DvA~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~~~  333 (380)
                      .+++|++|+|++++.+++++....+++||+++++..++.|+++.+.+.+|....
T Consensus       214 ~~~i~v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~  267 (319)
T 4b8w_A          214 RQFIYSLDLAQLFIWVLREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFHGE  267 (319)
T ss_dssp             ECEEEHHHHHHHHHHHHHHCCCSSCEEECCCGGGCEEHHHHHHHHHHHTTCCSC
T ss_pred             EEEEeHHHHHHHHHHHHhccccCCceEEEecCCCceeHHHHHHHHHHHhCCCCc
Confidence            468999999999999998865455789999999999999999999999987543

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.97  E-value=7.4e-31  Score=244.36  Aligned_cols=216  Identities=15%  Similarity=0.085  Sum_probs=173.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ++|+|||||| ||||++|+++|+++|++|++++|++.+...+..                   .+++++.+|++|.+   
T Consensus         4 m~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-------------------~~~~~~~~D~~d~~---   60 (286)
T 3ius_A            4 MTGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA-------------------SGAEPLLWPGEEPS---   60 (286)
T ss_dssp             -CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH-------------------TTEEEEESSSSCCC---
T ss_pred             CcCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh-------------------CCCeEEEecccccc---
Confidence            4579999998 999999999999999999999999987766543                   67999999999854   


Q ss_pred             HHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHH--cCCCEEEEEccCCCCCCC-----CchhhhchhhHH
Q 016901          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATI--AKVNHFIMVSSLGTNKFG-----FPAAILNLFWGV  231 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~--~~v~r~V~~SS~~~~~~~-----~~~~~~~~~~~Y  231 (380)
                        +.++|+|||+|+.....           ...+.++++++++  .+++||||+||.+++...     .+..+..+.+.|
T Consensus        61 --~~~~d~vi~~a~~~~~~-----------~~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~Y  127 (286)
T 3ius_A           61 --LDGVTHLLISTAPDSGG-----------DPVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPTAAR  127 (286)
T ss_dssp             --CTTCCEEEECCCCBTTB-----------CHHHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCCSHH
T ss_pred             --cCCCCEEEECCCccccc-----------cHHHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCCCHH
Confidence              78999999999865321           1246889999998  789999999998775432     122344556789


Q ss_pred             HHHHHHHHHHHHHC-CCCEEEEecCcccCCCccccc----ccceeeccCCcccCCCCCHHHHHHHHHHHHhCCCCccCcE
Q 016901          232 LLWKRKAEEALIAS-GLPYTIVRPGGMERPTDAYKE----THNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKV  306 (380)
Q Consensus       232 ~~sK~~~E~~l~~~-g~~~~ivRpg~v~gp~~~~~~----~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~~~~~~~~  306 (380)
                      +.+|+.+|+++++. |++++++||+++|||+.....    .....+... ....+++|++|+|++++.+++++.  .+++
T Consensus       128 ~~sK~~~E~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~-~~~~~~i~v~Dva~a~~~~~~~~~--~g~~  204 (286)
T 3ius_A          128 GRWRVMAEQQWQAVPNLPLHVFRLAGIYGPGRGPFSKLGKGGIRRIIKP-GQVFSRIHVEDIAQVLAASMARPD--PGAV  204 (286)
T ss_dssp             HHHHHHHHHHHHHSTTCCEEEEEECEEEBTTBSSSTTSSSSCCCEEECT-TCCBCEEEHHHHHHHHHHHHHSCC--TTCE
T ss_pred             HHHHHHHHHHHHhhcCCCEEEEeccceECCCchHHHHHhcCCccccCCC-CcccceEEHHHHHHHHHHHHhCCC--CCCE
Confidence            99999999999997 999999999999999754311    111122222 234478999999999999999877  3789


Q ss_pred             EEEecCCCCCcchHHHHHHhcCCCCCC
Q 016901          307 VEVIAETTAPLTPMEELLAKIPSQRAE  333 (380)
Q Consensus       307 ~ni~~~~~~s~~~~~e~~~~~~~~~~~  333 (380)
                      ||+++++..++.|+++.+.+.+|....
T Consensus       205 ~~i~~~~~~s~~e~~~~i~~~~g~~~~  231 (286)
T 3ius_A          205 YNVCDDEPVPPQDVIAYAAELQGLPLP  231 (286)
T ss_dssp             EEECCSCCBCHHHHHHHHHHHHTCCCC
T ss_pred             EEEeCCCCccHHHHHHHHHHHcCCCCC
Confidence            999999999999999999999987644

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.97  E-value=6.8e-31  Score=235.76  Aligned_cols=205  Identities=13%  Similarity=0.020  Sum_probs=157.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      |+|||||||||||++++++|+++|++|++++|++++...+..                   .+++++.+|++|.++  ++
T Consensus         1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-------------------~~~~~~~~D~~d~~~--~~   59 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLG-------------------ATVATLVKEPLVLTE--AD   59 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTC-------------------TTSEEEECCGGGCCH--HH
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccC-------------------CCceEEecccccccH--hh
Confidence            579999999999999999999999999999999877654321                   579999999999887  88


Q ss_pred             hcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCCc--------hhhhchhhHHH
Q 016901          161 LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFP--------AAILNLFWGVL  232 (380)
Q Consensus       161 ~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~--------~~~~~~~~~Y~  232 (380)
                      ++++|+||||||...     ......+|+.++.+++++|++.+ +|||++||.++......        .....+...|+
T Consensus        60 ~~~~d~vi~~ag~~~-----~~~~~~~n~~~~~~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~~y~  133 (224)
T 3h2s_A           60 LDSVDAVVDALSVPW-----GSGRGYLHLDFATHLVSLLRNSD-TLAVFILGSASLAMPGADHPMILDFPESAASQPWYD  133 (224)
T ss_dssp             HTTCSEEEECCCCCT-----TSSCTHHHHHHHHHHHHTCTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGSTTHH
T ss_pred             cccCCEEEECCccCC-----CcchhhHHHHHHHHHHHHHHHcC-CcEEEEecceeeccCCCCccccccCCCCCccchhhH
Confidence            899999999999751     11236789999999999999999 99999999755322111        11222356799


Q ss_pred             HHHHHHHHHH---HHCCCCEEEEecCcccCCCcccccccceeeccC----CcccCCCCCHHHHHHHHHHHHhCCCCccCc
Q 016901          233 LWKRKAEEAL---IASGLPYTIVRPGGMERPTDAYKETHNITLSQE----DTLFGGQVSNLQVAELLACMAKNRSLSYCK  305 (380)
Q Consensus       233 ~sK~~~E~~l---~~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~----~~~~~~~i~~~DvA~~i~~~l~~~~~~~~~  305 (380)
                      .+|..+|.+.   ++.|+++++||||++|||+....    +.....    ......+++++|+|++++.+++++. ..++
T Consensus       134 ~sK~~~e~~~~~~~~~~i~~~ivrp~~v~g~~~~~~----~~~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~-~~g~  208 (224)
T 3h2s_A          134 GALYQYYEYQFLQMNANVNWIGISPSEAFPSGPATS----YVAGKDTLLVGEDGQSHITTGNMALAILDQLEHPT-AIRD  208 (224)
T ss_dssp             HHHHHHHHHHHHTTCTTSCEEEEEECSBCCCCCCCC----EEEESSBCCCCTTSCCBCCHHHHHHHHHHHHHSCC-CTTS
T ss_pred             HHHHHHHHHHHHHhcCCCcEEEEcCccccCCCcccC----ceecccccccCCCCCceEeHHHHHHHHHHHhcCcc-ccCC
Confidence            9999999652   25799999999999999843211    111111    1112368999999999999999987 6789


Q ss_pred             EEEEecCCCCCc
Q 016901          306 VVEVIAETTAPL  317 (380)
Q Consensus       306 ~~ni~~~~~~s~  317 (380)
                      +|++++.+..+.
T Consensus       209 ~~~~~~~~~~~~  220 (224)
T 3h2s_A          209 RIVVRDADLEHH  220 (224)
T ss_dssp             EEEEEECC----
T ss_pred             EEEEecCcchhc
Confidence            999999876543

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.97  E-value=4.6e-32  Score=258.14  Aligned_cols=232  Identities=15%  Similarity=0.137  Sum_probs=180.7

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh
Q 016901           76 DSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (380)
Q Consensus        76 ~~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~  155 (380)
                      ..+++|+|||||||||||++++++|+++|++|++++|+........                 ....+++++.+|++|.+
T Consensus        16 ~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----------------~~l~~v~~~~~Dl~d~~   78 (330)
T 2pzm_A           16 PRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVL-----------------PPVAGLSVIEGSVTDAG   78 (330)
T ss_dssp             STTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGS-----------------CSCTTEEEEECCTTCHH
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhh-----------------hccCCceEEEeeCCCHH
Confidence            3557789999999999999999999999999999999754321100                 01157899999999999


Q ss_pred             cHHHHhc--CCCEEEEccccCccc-cCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCC----chhhh-ch
Q 016901          156 QIEPALG--NASVVICCIGASEKE-VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF----PAAIL-NL  227 (380)
Q Consensus       156 ~~~~a~~--~~d~Vi~~Ag~~~~~-~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~----~~~~~-~~  227 (380)
                      ++.++++  ++|+||||||..... ..++.  +++|+.|+.+++++|.+.++++|||+||.+++....    +.... .+
T Consensus        79 ~~~~~~~~~~~D~vih~A~~~~~~~~~~~~--~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~E~~~~  156 (330)
T 2pzm_A           79 LLERAFDSFKPTHVVHSAAAYKDPDDWAED--AATNVQGSINVAKAASKAGVKRLLNFQTALCYGRPATVPIPIDSPTAP  156 (330)
T ss_dssp             HHHHHHHHHCCSEEEECCCCCSCTTCHHHH--HHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGCSCSSSSBCTTCCCCC
T ss_pred             HHHHHHhhcCCCEEEECCccCCCccccChh--HHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhCCCccCCCCcCCCCCC
Confidence            9999998  999999999965431 11222  789999999999999999999999999987743211    10000 24


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCEEEEecCcccCCCccccc---------ccceeeccCCcccCCCCCHHHHHH-HHHHHHh
Q 016901          228 FWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKE---------THNITLSQEDTLFGGQVSNLQVAE-LLACMAK  297 (380)
Q Consensus       228 ~~~Y~~sK~~~E~~l~~~g~~~~ivRpg~v~gp~~~~~~---------~~~~~~~~~~~~~~~~i~~~DvA~-~i~~~l~  297 (380)
                      ...|+.+|+++|.+++..++++++|||+++|||+.....         ... ....... ...+++++|+|+ +++.+++
T Consensus       157 ~~~Y~~sK~~~e~~~~~~~~~~~~iR~~~v~gp~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~i~~~Dva~~a~~~~~~  234 (330)
T 2pzm_A          157 FTSYGISKTAGEAFLMMSDVPVVSLRLANVTGPRLAIGPIPTFYKRLKAGQ-KCFCSDT-VRDFLDMSDFLAIADLSLQE  234 (330)
T ss_dssp             CSHHHHHHHHHHHHHHTCSSCEEEEEECEEECTTCCSSHHHHHHHHHHTTC-CCCEESC-EECEEEHHHHHHHHHHHTST
T ss_pred             CChHHHHHHHHHHHHHHcCCCEEEEeeeeeECcCCCCCHHHHHHHHHHcCC-EEeCCCC-EecceeHHHHHHHHHHHHhh
Confidence            568999999999999988999999999999999751100         000 1111112 446899999999 9999998


Q ss_pred             CCCCccCcEEEEecCCCCCcchHHHHHHhcCCCC
Q 016901          298 NRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (380)
Q Consensus       298 ~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~  331 (380)
                      ++.   +++||++++...++.|+++.+.+.++..
T Consensus       235 ~~~---g~~~~v~~~~~~s~~e~~~~i~~~~g~~  265 (330)
T 2pzm_A          235 GRP---TGVFNVSTGEGHSIKEVFDVVLDYVGAT  265 (330)
T ss_dssp             TCC---CEEEEESCSCCEEHHHHHHHHHHHHTCC
T ss_pred             cCC---CCEEEeCCCCCCCHHHHHHHHHHHhCCC
Confidence            743   8999999999999999999999998875

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.97  E-value=5.9e-32  Score=262.08  Aligned_cols=234  Identities=14%  Similarity=0.102  Sum_probs=178.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      .+|+|||||||||||++|+++|+++| ++|++++|+.......                 .....+++++.+|++|++++
T Consensus        31 ~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~-----------------l~~~~~v~~~~~Dl~d~~~l   93 (377)
T 2q1s_A           31 ANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKIN-----------------VPDHPAVRFSETSITDDALL   93 (377)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGG-----------------SCCCTTEEEECSCTTCHHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhh-----------------ccCCCceEEEECCCCCHHHH
Confidence            56899999999999999999999999 9999999986532110                 00125799999999999999


Q ss_pred             HHHhcCCCEEEEccccCccc--cCCCCCcchhhHHHHHHHHHHHHHc-CCCEEEEEccCCCCCCCC-------chh---h
Q 016901          158 EPALGNASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIA-KVNHFIMVSSLGTNKFGF-------PAA---I  224 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag~~~~~--~~~~~~~~~~nv~g~~~ll~a~~~~-~v~r~V~~SS~~~~~~~~-------~~~---~  224 (380)
                      .++++++|+||||||.....  ..++...+++|+.++.+++++|++. ++++|||+||.+++....       +..   +
T Consensus        94 ~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~  173 (377)
T 2q1s_A           94 ASLQDEYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVS  173 (377)
T ss_dssp             HHCCSCCSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--------------CCCCCCC
T ss_pred             HHHhhCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCCCCcCccccccccc
Confidence            99999999999999865322  1234456789999999999999998 899999999987743211       111   2


Q ss_pred             h-chhhHHHHHHHHHHHHHHH----CCCCEEEEecCcccCCCc---------cc----cc-----------ccceeeccC
Q 016901          225 L-NLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTD---------AY----KE-----------THNITLSQE  275 (380)
Q Consensus       225 ~-~~~~~Y~~sK~~~E~~l~~----~g~~~~ivRpg~v~gp~~---------~~----~~-----------~~~~~~~~~  275 (380)
                      . .+...|+.+|+.+|++++.    .|+++++||||++|||+.         ..    ..           ...+.+...
T Consensus       174 ~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~  253 (377)
T 2q1s_A          174 LHNNDSPYSMSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENG  253 (377)
T ss_dssp             SSCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGG
T ss_pred             ccCCCCchHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCC
Confidence            2 4557899999999998874    599999999999999975         21    00           000111112


Q ss_pred             CcccCCCCCHHHHHHH-HHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCCCCC
Q 016901          276 DTLFGGQVSNLQVAEL-LACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (380)
Q Consensus       276 ~~~~~~~i~~~DvA~~-i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~~  332 (380)
                      .....++++++|+|++ ++.+++++.  .+ +||+++++..++.|+++.+.+.++...
T Consensus       254 g~~~~~~i~v~Dva~a~i~~~~~~~~--~g-~~~i~~~~~~s~~e~~~~i~~~~g~~~  308 (377)
T 2q1s_A          254 GVATRDFIFVEDVANGLIACAADGTP--GG-VYNIASGKETSIADLATKINEITGNNT  308 (377)
T ss_dssp             GCCEECCEEHHHHHHHHHHHHHHCCT--TE-EEECCCCCCEEHHHHHHHHHHHHTCCS
T ss_pred             CCeEEeeEEHHHHHHHHHHHHHhcCC--CC-eEEecCCCceeHHHHHHHHHHHhCCCC
Confidence            2233468999999999 999998865  35 999999999999999999999988754

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.97  E-value=2.2e-31  Score=259.86  Aligned_cols=241  Identities=14%  Similarity=0.052  Sum_probs=175.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHH-------------HHHHHhh-hhcccccccCCCCCCce
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL-------------VQSVKQM-KLDGELANKGIQPVEML  144 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~-------------~~~~~~~-~~~~~~~~~~~~~~~~v  144 (380)
                      ++++|||||||||||++|+++|+++|++|++++|........             .+.+..+ .+.          ..++
T Consensus        10 ~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~----------~~~v   79 (404)
T 1i24_A           10 HGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALT----------GKSI   79 (404)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHH----------CCCC
T ss_pred             CCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhcc----------CCce
Confidence            678999999999999999999999999999999875432110             0011100 000          1578


Q ss_pred             EEEEcCCCChhcHHHHhcC--CCEEEEccccCcccc--CCC---CCcchhhHHHHHHHHHHHHHcCC-CEEEEEccCCCC
Q 016901          145 ELVECDLEKRVQIEPALGN--ASVVICCIGASEKEV--FDI---TGPYRIDFQATKNLVDAATIAKV-NHFIMVSSLGTN  216 (380)
Q Consensus       145 ~~~~~Dl~d~~~~~~a~~~--~d~Vi~~Ag~~~~~~--~~~---~~~~~~nv~g~~~ll~a~~~~~v-~r~V~~SS~~~~  216 (380)
                      +++.+|++|.+++.+++.+  +|+||||||......  .++   ...+++|+.|+.+++++|++.++ ++|||+||.+++
T Consensus        80 ~~~~~Dl~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~vy  159 (404)
T 1i24_A           80 ELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEY  159 (404)
T ss_dssp             EEEESCTTSHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGG
T ss_pred             EEEECCCCCHHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHHHh
Confidence            9999999999999999987  999999999653221  111   12468999999999999999887 599999998764


Q ss_pred             CCCC---ch---------------hhhchhhHHHHHHHHHHHHHHH----CCCCEEEEecCcccCCCcccc---------
Q 016901          217 KFGF---PA---------------AILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK---------  265 (380)
Q Consensus       217 ~~~~---~~---------------~~~~~~~~Y~~sK~~~E~~l~~----~g~~~~ivRpg~v~gp~~~~~---------  265 (380)
                      ....   .+               .+..+.+.|+.+|+++|.+++.    .|+++++||||+||||+....         
T Consensus       160 g~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~  239 (404)
T 1i24_A          160 GTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNR  239 (404)
T ss_dssp             CCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCC
T ss_pred             CCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCccccccccccc
Confidence            3211   00               1234556899999999998764    599999999999999975210         


Q ss_pred             -------------------cccceeeccCCcccCCCCCHHHHHHHHHHHHhCCCCccC--cEEEEecCCCCCcchHHHHH
Q 016901          266 -------------------ETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYC--KVVEVIAETTAPLTPMEELL  324 (380)
Q Consensus       266 -------------------~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~~~~~~--~~~ni~~~~~~s~~~~~e~~  324 (380)
                                         ....+.+........+++|++|+|++++.+++++. ..+  ++||+++ +..++.|+++.+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~-~~g~~~~yni~~-~~~s~~e~~~~i  317 (404)
T 1i24_A          240 LDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPA-KAGEFRVFNQFT-EQFSVNELASLV  317 (404)
T ss_dssp             CCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCC-CTTCEEEEEECS-EEEEHHHHHHHH
T ss_pred             cccccchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcc-cCCCceEEEECC-CCCcHHHHHHHH
Confidence                               00011111222233468999999999999998765 234  7999998 778999999999


Q ss_pred             Hhc---CCCC
Q 016901          325 AKI---PSQR  331 (380)
Q Consensus       325 ~~~---~~~~  331 (380)
                      .++   .|..
T Consensus       318 ~~~~~~~g~~  327 (404)
T 1i24_A          318 TKAGSKLGLD  327 (404)
T ss_dssp             HHHHHTTTCC
T ss_pred             HHHHHhhCCC
Confidence            987   5543

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.97  E-value=4.2e-32  Score=255.94  Aligned_cols=229  Identities=17%  Similarity=0.096  Sum_probs=176.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      |+||||||+||||++++++|+++|++|++++|........                   ...+++++.+|++|++++.++
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~-------------------~~~~~~~~~~Dl~~~~~~~~~   61 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKREN-------------------VPKGVPFFRVDLRDKEGVERA   61 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGGG-------------------SCTTCCEECCCTTCHHHHHHH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchhh-------------------cccCeEEEECCCCCHHHHHHH
Confidence            4799999999999999999999999999999854321100                   014678899999999999999


Q ss_pred             hc--CCCEEEEccccCcc--ccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccC-CCCCC------CCchhhhchhh
Q 016901          161 LG--NASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL-GTNKF------GFPAAILNLFW  229 (380)
Q Consensus       161 ~~--~~d~Vi~~Ag~~~~--~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~-~~~~~------~~~~~~~~~~~  229 (380)
                      ++  ++|+|||||+....  ...++...+++|+.|+.+++++|++.++++|||+||. +++..      ..+..+..+..
T Consensus        62 ~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~  141 (311)
T 2p5y_A           62 FREFRPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPEGERAEETWPPRPKS  141 (311)
T ss_dssp             HHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCS
T ss_pred             HHhcCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCC
Confidence            97  89999999986532  1223445688999999999999999999999999997 44221      11122234556


Q ss_pred             HHHHHHHHHHHHHH----HCCCCEEEEecCcccCCCccccc--------------ccceeec-----cCCcccCCCCCHH
Q 016901          230 GVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKE--------------THNITLS-----QEDTLFGGQVSNL  286 (380)
Q Consensus       230 ~Y~~sK~~~E~~l~----~~g~~~~ivRpg~v~gp~~~~~~--------------~~~~~~~-----~~~~~~~~~i~~~  286 (380)
                      .|+.+|.++|.+++    +.|+++++|||+++|||+.....              .....+.     ........++|++
T Consensus       142 ~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~  221 (311)
T 2p5y_A          142 PYAASKAAFEHYLSVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVG  221 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHH
T ss_pred             hHHHHHHHHHHHHHHHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHH
Confidence            89999999999886    36999999999999999753210              0111111     2222334689999


Q ss_pred             HHHHHHHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCCCCC
Q 016901          287 QVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (380)
Q Consensus       287 DvA~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~~  332 (380)
                      |+|++++.+++++    +++||+++++..|+.|+++.+.+.+|...
T Consensus       222 Dva~a~~~~~~~~----~~~~~i~~~~~~s~~e~~~~i~~~~g~~~  263 (311)
T 2p5y_A          222 DVAEAHALALFSL----EGIYNVGTGEGHTTREVLMAVAEAAGKAP  263 (311)
T ss_dssp             HHHHHHHHHHHHC----CEEEEESCSCCEEHHHHHHHHHHHHTCCC
T ss_pred             HHHHHHHHHHhCC----CCEEEeCCCCCccHHHHHHHHHHHhCCCC
Confidence            9999999999863    78999999999999999999999988654

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.97  E-value=1.3e-31  Score=255.39  Aligned_cols=234  Identities=16%  Similarity=0.067  Sum_probs=179.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHC---C---CeEEEEeCCchh--HHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCC
Q 016901           81 NLAFVAGATGKVGSRTVRELLKL---G---FRVRAGVRSVQR--AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLE  152 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~---G---~~V~~l~R~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~  152 (380)
                      |+|||||||||||++++++|+++   |   ++|++++|+...  ...+.    .+           ....+++++.+|++
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~----~~-----------~~~~~~~~~~~Dl~   65 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLA----PV-----------DADPRLRFVHGDIR   65 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGG----GG-----------TTCTTEEEEECCTT
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhh----hc-----------ccCCCeEEEEcCCC
Confidence            57999999999999999999997   8   999999996421  11110    00           01157899999999


Q ss_pred             ChhcHHHHhcCCCEEEEccccCccc--cCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCC-----Cchhhh
Q 016901          153 KRVQIEPALGNASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAIL  225 (380)
Q Consensus       153 d~~~~~~a~~~~d~Vi~~Ag~~~~~--~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~-----~~~~~~  225 (380)
                      |++++.+++.++|+||||||.....  ..++...+++|+.|+.+++++|.+.++++|||+||.+++...     .+..+.
T Consensus        66 d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~  145 (337)
T 1r6d_A           66 DAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPL  145 (337)
T ss_dssp             CHHHHHHHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCC
T ss_pred             CHHHHHHHhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhCCCCCCCCCCCCCC
Confidence            9999999999999999999865321  234455688999999999999999999999999998764321     112233


Q ss_pred             chhhHHHHHHHHHHHHHHH----CCCCEEEEecCcccCCCccccc-----------ccceeeccCCcccCCCCCHHHHHH
Q 016901          226 NLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE-----------THNITLSQEDTLFGGQVSNLQVAE  290 (380)
Q Consensus       226 ~~~~~Y~~sK~~~E~~l~~----~g~~~~ivRpg~v~gp~~~~~~-----------~~~~~~~~~~~~~~~~i~~~DvA~  290 (380)
                      .+...|+.+|+.+|.+++.    .|++++++||+++|||+.....           ...+.+.........++|++|+|+
T Consensus       146 ~~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  225 (337)
T 1r6d_A          146 EPNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCR  225 (337)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHH
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHCCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHH
Confidence            4567899999999998863    6999999999999999753110           111122122223346899999999


Q ss_pred             HHHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCCCC
Q 016901          291 LLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (380)
Q Consensus       291 ~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~  331 (380)
                      +++.+++++.  .+++||+++++..++.|+++.+.+.++..
T Consensus       226 a~~~~~~~~~--~g~~~~v~~~~~~s~~e~~~~i~~~~g~~  264 (337)
T 1r6d_A          226 GIALVLAGGR--AGEIYHIGGGLELTNRELTGILLDSLGAD  264 (337)
T ss_dssp             HHHHHHHHCC--TTCEEEECCCCEEEHHHHHHHHHHHHTCC
T ss_pred             HHHHHHhCCC--CCCEEEeCCCCCccHHHHHHHHHHHhCCC
Confidence            9999998654  47899999999999999999999998864

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.97  E-value=2.1e-31  Score=259.47  Aligned_cols=244  Identities=16%  Similarity=0.054  Sum_probs=179.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHH-HCCCeEEEEeCCchh---------HHHHHHHHHhhhhcccccccCCCCCCc---eEE
Q 016901           80 DNLAFVAGATGKVGSRTVRELL-KLGFRVRAGVRSVQR---------AENLVQSVKQMKLDGELANKGIQPVEM---LEL  146 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll-~~G~~V~~l~R~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~---v~~  146 (380)
                      +|+|||||||||||++++++|+ ++|++|++++|+...         ...+.+.++.+.        +.....+   +++
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~   73 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSD--------GPKPPWADRYAAL   73 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSC--------SSCCTTTTCCCEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhh--------ccccccCCceEEE
Confidence            3689999999999999999999 999999999997654         333332222210        0000124   899


Q ss_pred             EEcCCCChhcHHHHhc--C-CCEEEEccccCccc--cCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCC-
Q 016901          147 VECDLEKRVQIEPALG--N-ASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF-  220 (380)
Q Consensus       147 ~~~Dl~d~~~~~~a~~--~-~d~Vi~~Ag~~~~~--~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~-  220 (380)
                      +.+|++|++++.++++  + +|+||||||.....  ..++...+++|+.|+.+++++|++.++++|||+||.+++.... 
T Consensus        74 ~~~Dl~d~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g~~~~  153 (397)
T 1gy8_A           74 EVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTM  153 (397)
T ss_dssp             EESCTTCHHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC
T ss_pred             EECCCCCHHHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHhCCCCc
Confidence            9999999999999987  6 99999999965321  2244556889999999999999999999999999987643211 


Q ss_pred             -----------chhhhchhhHHHHHHHHHHHHHHH----CCCCEEEEecCcccCCCccc---------cc----------
Q 016901          221 -----------PAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAY---------KE----------  266 (380)
Q Consensus       221 -----------~~~~~~~~~~Y~~sK~~~E~~l~~----~g~~~~ivRpg~v~gp~~~~---------~~----------  266 (380)
                                 +..+..+...|+.+|+++|.+++.    .|+++++|||+++|||+...         ..          
T Consensus       154 ~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~  233 (397)
T 1gy8_A          154 GSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVM  233 (397)
T ss_dssp             -----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHH
T ss_pred             ccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHH
Confidence                       112234467899999999998874    59999999999999996310         00          


Q ss_pred             ----cc-------------ceeecc------CCcccCCCCCHHHHHHHHHHHHhCCCCcc----C---cEEEEecCCCCC
Q 016901          267 ----TH-------------NITLSQ------EDTLFGGQVSNLQVAELLACMAKNRSLSY----C---KVVEVIAETTAP  316 (380)
Q Consensus       267 ----~~-------------~~~~~~------~~~~~~~~i~~~DvA~~i~~~l~~~~~~~----~---~~~ni~~~~~~s  316 (380)
                          ..             .+.+..      ......++||++|+|++++.+++++....    +   ++||+++++..+
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~~~~s  313 (397)
T 1gy8_A          234 SDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYS  313 (397)
T ss_dssp             HHHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEE
T ss_pred             HHHHhcCccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCCCCccc
Confidence                00             011111      11222368999999999999997643111    3   899999999999


Q ss_pred             cchHHHHHHhcCCCC
Q 016901          317 LTPMEELLAKIPSQR  331 (380)
Q Consensus       317 ~~~~~e~~~~~~~~~  331 (380)
                      +.|+++.+.+.++..
T Consensus       314 ~~e~~~~i~~~~g~~  328 (397)
T 1gy8_A          314 VREVIEVARKTTGHP  328 (397)
T ss_dssp             HHHHHHHHHHHHCCC
T ss_pred             HHHHHHHHHHHhCCC
Confidence            999999999998864

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.97  E-value=4.3e-32  Score=260.78  Aligned_cols=239  Identities=14%  Similarity=0.097  Sum_probs=181.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      .+|+|||||||||||++|+++|+++|++|++++|+..+...+...+.              ...+++++.+|++|++++.
T Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~--------------~~~~~~~~~~Dl~d~~~~~   73 (357)
T 1rkx_A            8 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR--------------VADGMQSEIGDIRDQNKLL   73 (357)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT--------------TTTTSEEEECCTTCHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhc--------------cCCceEEEEccccCHHHHH
Confidence            56899999999999999999999999999999998765433322111              0157899999999999999


Q ss_pred             HHhcC--CCEEEEccccCcc--ccCCCCCcchhhHHHHHHHHHHHHHcC-CCEEEEEccCCCCCCCC------chhhhch
Q 016901          159 PALGN--ASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAK-VNHFIMVSSLGTNKFGF------PAAILNL  227 (380)
Q Consensus       159 ~a~~~--~d~Vi~~Ag~~~~--~~~~~~~~~~~nv~g~~~ll~a~~~~~-v~r~V~~SS~~~~~~~~------~~~~~~~  227 (380)
                      +++++  +|+||||||....  ...++...+++|+.|+.+++++|.+.+ +++|||+||.+++....      +..+..+
T Consensus        74 ~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~  153 (357)
T 1rkx_A           74 ESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGG  153 (357)
T ss_dssp             HHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCC
T ss_pred             HHHHhcCCCEEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCCCCCCC
Confidence            99976  8999999985321  122344567899999999999999887 88999999987743211      1113345


Q ss_pred             hhHHHHHHHHHHHHHHHC-------------CCCEEEEecCcccCCCcccc------------cccceeeccCCcccCCC
Q 016901          228 FWGVLLWKRKAEEALIAS-------------GLPYTIVRPGGMERPTDAYK------------ETHNITLSQEDTLFGGQ  282 (380)
Q Consensus       228 ~~~Y~~sK~~~E~~l~~~-------------g~~~~ivRpg~v~gp~~~~~------------~~~~~~~~~~~~~~~~~  282 (380)
                      ...|+.+|+.+|++++..             |+++++||||++|||++...            ....+.+.. .....++
T Consensus       154 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~  232 (357)
T 1rkx_A          154 YDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRN-PHAIRPW  232 (357)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSC-TTCEECC
T ss_pred             CCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEECC-CCCeecc
Confidence            678999999999988642             99999999999999975210            011112221 2233468


Q ss_pred             CCHHHHHHHHHHHHhC---CCCccCcEEEEecC--CCCCcchHHHHHHhcCCCCC
Q 016901          283 VSNLQVAELLACMAKN---RSLSYCKVVEVIAE--TTAPLTPMEELLAKIPSQRA  332 (380)
Q Consensus       283 i~~~DvA~~i~~~l~~---~~~~~~~~~ni~~~--~~~s~~~~~e~~~~~~~~~~  332 (380)
                      +|++|+|++++.++++   .....+++||++++  +..++.|+++.+.+.++...
T Consensus       233 v~v~Dva~a~~~~~~~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~~~  287 (357)
T 1rkx_A          233 QHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGA  287 (357)
T ss_dssp             EETHHHHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTC
T ss_pred             EeHHHHHHHHHHHHHhhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHhCCCC
Confidence            9999999999999874   21134789999984  67899999999999988653

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.97  E-value=4.1e-32  Score=255.77  Aligned_cols=228  Identities=12%  Similarity=0.011  Sum_probs=176.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHC--CCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKL--GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~--G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +|+|||||||||||++|+++|+++  |++|++++|+..+.. +.                    .+++++.+|++|.+++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~~--------------------~~~~~~~~D~~d~~~~   60 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-VV--------------------NSGPFEVVNALDFNQI   60 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-HH--------------------HSSCEEECCTTCHHHH
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-cc--------------------CCCceEEecCCCHHHH
Confidence            468999999999999999999999  899999999876532 11                    3577899999999999


Q ss_pred             HHHhc--CCCEEEEccccCccc-cCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCC------chhhhchh
Q 016901          158 EPALG--NASVVICCIGASEKE-VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF------PAAILNLF  228 (380)
Q Consensus       158 ~~a~~--~~d~Vi~~Ag~~~~~-~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~------~~~~~~~~  228 (380)
                      .++++  ++|+||||||..... ..++...+++|+.++.+++++|++.++++|||+||.+++....      +..+..+.
T Consensus        61 ~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~  140 (312)
T 2yy7_A           61 EHLVEVHKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPKENTPQYTIMEPS  140 (312)
T ss_dssp             HHHHHHTTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTSCSSSBCSSCBCCCC
T ss_pred             HHHHhhcCCCEEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCCCCCccccCcCCCC
Confidence            99998  899999999865321 1234456889999999999999999999999999987753211      11223456


Q ss_pred             hHHHHHHHHHHHHHHH----CCCCEEEEecCcccCCCccccc---------------ccceeeccCCcccCCCCCHHHHH
Q 016901          229 WGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE---------------THNITLSQEDTLFGGQVSNLQVA  289 (380)
Q Consensus       229 ~~Y~~sK~~~E~~l~~----~g~~~~ivRpg~v~gp~~~~~~---------------~~~~~~~~~~~~~~~~i~~~DvA  289 (380)
                      ..|+.+|..+|.+++.    .|++++++||+++|||......               ..............+++|++|+|
T Consensus       141 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  220 (312)
T 2yy7_A          141 TVYGISKQAGERWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAI  220 (312)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHHH
Confidence            7899999999998863    5899999999999996431110               11111112222334689999999


Q ss_pred             HHHHHHHhCCCCc--cCcEEEEecCCCCCcchHHHHHHhcCC
Q 016901          290 ELLACMAKNRSLS--YCKVVEVIAETTAPLTPMEELLAKIPS  329 (380)
Q Consensus       290 ~~i~~~l~~~~~~--~~~~~ni~~~~~~s~~~~~e~~~~~~~  329 (380)
                      ++++.+++++...  .+++||+++ +..++.|+++.+.+.++
T Consensus       221 ~a~~~~~~~~~~~~~~~~~~ni~~-~~~s~~e~~~~i~~~~~  261 (312)
T 2yy7_A          221 DATINIMKAPVEKIKIHSSYNLAA-MSFTPTEIANEIKKHIP  261 (312)
T ss_dssp             HHHHHHHHSCGGGCCCSSCEECCS-EEECHHHHHHHHHTTCT
T ss_pred             HHHHHHHhCcccccccCceEEeCC-CccCHHHHHHHHHHHCC
Confidence            9999999886522  248999986 77899999999999987

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.97  E-value=2.3e-31  Score=254.55  Aligned_cols=240  Identities=15%  Similarity=0.115  Sum_probs=177.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchh------HHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCC
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR------AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK  153 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d  153 (380)
                      +|+|||||||||||++++++|+++|++|++++|+...      ..+..+.+...  .          ..+++++.+|++|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~--~----------~~~~~~~~~D~~~   69 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQEL--T----------GRSVEFEEMDILD   69 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHH--H----------TCCCEEEECCTTC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhc--c----------CCceEEEECCCCC
Confidence            4789999999999999999999999999999985432      11111112111  0          0478999999999


Q ss_pred             hhcHHHHhc--CCCEEEEccccCcc--ccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCC-----Cchhh
Q 016901          154 RVQIEPALG--NASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAI  224 (380)
Q Consensus       154 ~~~~~~a~~--~~d~Vi~~Ag~~~~--~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~-----~~~~~  224 (380)
                      .+++.++++  ++|+||||||....  ...++...+++|+.|+.+++++|++.++++|||+||.+++...     .+..+
T Consensus        70 ~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~E~~~  149 (348)
T 1ek6_A           70 QGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHP  149 (348)
T ss_dssp             HHHHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSC
T ss_pred             HHHHHHHHHhcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCCCCCcCCCCC
Confidence            999999998  89999999986532  1223445688999999999999999999999999998774321     11122


Q ss_pred             hch-hhHHHHHHHHHHHHHHH---CC--CCEEEEecCcccCCCcc--cc--------------------cccceeecc--
Q 016901          225 LNL-FWGVLLWKRKAEEALIA---SG--LPYTIVRPGGMERPTDA--YK--------------------ETHNITLSQ--  274 (380)
Q Consensus       225 ~~~-~~~Y~~sK~~~E~~l~~---~g--~~~~ivRpg~v~gp~~~--~~--------------------~~~~~~~~~--  274 (380)
                      ..+ ...|+.+|+.+|.+++.   .+  ++++++||+++|||+..  +.                    ....+.+..  
T Consensus       150 ~~p~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  229 (348)
T 1ek6_A          150 TGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGND  229 (348)
T ss_dssp             CCCCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSC
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCc
Confidence            233 56899999999998864   24  99999999999998420  00                    000011111  


Q ss_pred             ----CCcccCCCCCHHHHHHHHHHHHhCCC-CccCcEEEEecCCCCCcchHHHHHHhcCCCC
Q 016901          275 ----EDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (380)
Q Consensus       275 ----~~~~~~~~i~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~  331 (380)
                          ......++||++|+|++++.+++++. ...+++||+++++..++.|+++.+.++++..
T Consensus       230 ~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~s~~e~~~~i~~~~g~~  291 (348)
T 1ek6_A          230 YDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKK  291 (348)
T ss_dssp             SSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSC
T ss_pred             ccCCCCceEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCCCCccHHHHHHHHHHHhCCC
Confidence                11223368999999999999998753 1224899999999999999999999998864

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.97  E-value=1.6e-31  Score=254.29  Aligned_cols=235  Identities=14%  Similarity=-0.025  Sum_probs=179.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhH--HHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRA--ENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .+|+|||||||||||++++++|+++|++|++++|+.++.  ..+.    .+           ....+++++.+|++|.++
T Consensus        13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~-----------~~~~~~~~~~~Dl~d~~~   77 (335)
T 1rpn_A           13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLR----EL-----------GIEGDIQYEDGDMADACS   77 (335)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHH----HT-----------TCGGGEEEEECCTTCHHH
T ss_pred             cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchh----hc-----------cccCceEEEECCCCCHHH
Confidence            568999999999999999999999999999999987542  1111    00           001578999999999999


Q ss_pred             HHHHhcC--CCEEEEccccCccc--cCCCCCcchhhHHHHHHHHHHHHHcCC-CEEEEEccCCCCCCC-----Cchhhhc
Q 016901          157 IEPALGN--ASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKV-NHFIMVSSLGTNKFG-----FPAAILN  226 (380)
Q Consensus       157 ~~~a~~~--~d~Vi~~Ag~~~~~--~~~~~~~~~~nv~g~~~ll~a~~~~~v-~r~V~~SS~~~~~~~-----~~~~~~~  226 (380)
                      +.+++++  +|+||||||.....  ..++...+++|+.|+.+++++|++.++ ++|||+||.+++...     .+..+..
T Consensus        78 ~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~  157 (335)
T 1rpn_A           78 VQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFY  157 (335)
T ss_dssp             HHHHHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCC
T ss_pred             HHHHHHHcCCCEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCCCCCCCcccCCC
Confidence            9999975  79999999965322  234445678999999999999999886 899999998764321     1222334


Q ss_pred             hhhHHHHHHHHHHHHHHH----CCCCEEEEecCcccCCCccccc-------------cc--ceeeccCCcccCCCCCHHH
Q 016901          227 LFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE-------------TH--NITLSQEDTLFGGQVSNLQ  287 (380)
Q Consensus       227 ~~~~Y~~sK~~~E~~l~~----~g~~~~ivRpg~v~gp~~~~~~-------------~~--~~~~~~~~~~~~~~i~~~D  287 (380)
                      +...|+.+|+++|.+++.    .+++++++||+++|||+.....             ..  ............+++|++|
T Consensus       158 p~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~D  237 (335)
T 1rpn_A          158 PRSPYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGD  237 (335)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHH
T ss_pred             CCChhHHHHHHHHHHHHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHH
Confidence            566899999999998874    5999999999999999642110             00  0011111222336899999


Q ss_pred             HHHHHHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCCCC
Q 016901          288 VAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (380)
Q Consensus       288 vA~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~  331 (380)
                      +|++++.+++++.   +++||+++++..|+.|+++.+.+.+|..
T Consensus       238 va~a~~~~~~~~~---~~~~ni~~~~~~s~~e~~~~i~~~~g~~  278 (335)
T 1rpn_A          238 YVEAMWLMLQQDK---ADDYVVATGVTTTVRDMCQIAFEHVGLD  278 (335)
T ss_dssp             HHHHHHHHHHSSS---CCCEEECCSCEEEHHHHHHHHHHTTTCC
T ss_pred             HHHHHHHHHhcCC---CCEEEEeCCCCccHHHHHHHHHHHhCCC
Confidence            9999999998865   4899999999999999999999999864

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.97  E-value=4.9e-31  Score=252.73  Aligned_cols=224  Identities=12%  Similarity=0.126  Sum_probs=177.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHC-CC-eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCCh
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKL-GF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~-G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~  154 (380)
                      ++++|+|||||||||||++++++|+++ |+ +|++++|++.+...+.+.+.               ..+++++.+|++|.
T Consensus        18 ~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~---------------~~~v~~~~~Dl~d~   82 (344)
T 2gn4_A           18 MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN---------------DPRMRFFIGDVRDL   82 (344)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC---------------CTTEEEEECCTTCH
T ss_pred             hhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc---------------CCCEEEEECCCCCH
Confidence            346789999999999999999999999 97 99999999887766554332               15799999999999


Q ss_pred             hcHHHHhcCCCEEEEccccCccc--cCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCCchhhhchhhHHH
Q 016901          155 VQIEPALGNASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVL  232 (380)
Q Consensus       155 ~~~~~a~~~~d~Vi~~Ag~~~~~--~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~~Y~  232 (380)
                      +++.++++++|+||||||.....  ..++...+++|+.|+.+++++|.+.++++||++||..+..         +...|+
T Consensus        83 ~~l~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~~---------p~~~Y~  153 (344)
T 2gn4_A           83 ERLNYALEGVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAAN---------PINLYG  153 (344)
T ss_dssp             HHHHHHTTTCSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSS---------CCSHHH
T ss_pred             HHHHHHHhcCCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccCC---------CccHHH
Confidence            99999999999999999865321  1233456889999999999999999999999999976532         335799


Q ss_pred             HHHHHHHHHHHH-------CCCCEEEEecCcccCCCccccc-------cc--ceeeccCCcccCCCCCHHHHHHHHHHHH
Q 016901          233 LWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE-------TH--NITLSQEDTLFGGQVSNLQVAELLACMA  296 (380)
Q Consensus       233 ~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~-------~~--~~~~~~~~~~~~~~i~~~DvA~~i~~~l  296 (380)
                      .+|+++|.+++.       .|+++++||||++|||++....       .+  .+.+. .......+++++|+|++++.++
T Consensus       154 ~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~~i~~~~~~~~~g~~~~~i~-~~~~~r~~i~v~D~a~~v~~~l  232 (344)
T 2gn4_A          154 ATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGSVVPFFKKLVQNKASEIPIT-DIRMTRFWITLDEGVSFVLKSL  232 (344)
T ss_dssp             HHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTTSHHHHHHHHHHHTCCCEEES-CTTCEEEEECHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCCCHHHHHHHHHHcCCCceEEe-CCCeEEeeEEHHHHHHHHHHHH
Confidence            999999999874       5799999999999999753211       11  12222 2223335799999999999999


Q ss_pred             hCCCCccCcEEEEecCCCCCcchHHHHHHhcC
Q 016901          297 KNRSLSYCKVVEVIAETTAPLTPMEELLAKIP  328 (380)
Q Consensus       297 ~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~  328 (380)
                      +++.  .+++|++.++ ..++.|+++.+.+..
T Consensus       233 ~~~~--~g~~~~~~~~-~~s~~el~~~i~~~~  261 (344)
T 2gn4_A          233 KRMH--GGEIFVPKIP-SMKMTDLAKALAPNT  261 (344)
T ss_dssp             HHCC--SSCEEEECCC-EEEHHHHHHHHCTTC
T ss_pred             hhcc--CCCEEecCCC-cEEHHHHHHHHHHhC
Confidence            8754  4789998776 478889998888654

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.97  E-value=2.7e-31  Score=250.72  Aligned_cols=223  Identities=14%  Similarity=0.087  Sum_probs=153.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      +|+|||||||||||++++++|+++|++|++++|+.+.                         ++  ++.+|++|.+++.+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-------------------------~~--~~~~Dl~d~~~~~~   54 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR-------------------------PK--FEQVNLLDSNAVHH   54 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC---------------------------------------------CHH
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC-------------------------CC--eEEecCCCHHHHHH
Confidence            4789999999999999999999999999999987532                         12  67899999999999


Q ss_pred             HhcC--CCEEEEccccCccc--cCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCC----CchhhhchhhHH
Q 016901          160 ALGN--ASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG----FPAAILNLFWGV  231 (380)
Q Consensus       160 a~~~--~d~Vi~~Ag~~~~~--~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~----~~~~~~~~~~~Y  231 (380)
                      ++++  +|+||||||.....  ..++...+++|+.|+.+++++|.+.++ +|||+||.+++...    .+..+..+...|
T Consensus        55 ~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~~~~~~~~~E~~~~~~~~~Y  133 (315)
T 2ydy_A           55 IIHDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISSDYVFDGTNPPYREEDIPAPLNLY  133 (315)
T ss_dssp             HHHHHCCSEEEECC-------------------CHHHHHHHHHHHHHTC-EEEEEEEGGGSCSSSCSBCTTSCCCCCSHH
T ss_pred             HHHhhCCCEEEECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchHHHcCCCCCCCCCCCCCCCcCHH
Confidence            9975  99999999965432  345566789999999999999999887 99999998774321    112223456689


Q ss_pred             HHHHHHHHHHHHHCCCCEEEEecCcccCCCcccc----c--------cc-ceeeccCCcccCCCCCHHHHHHHHHHHHhC
Q 016901          232 LLWKRKAEEALIASGLPYTIVRPGGMERPTDAYK----E--------TH-NITLSQEDTLFGGQVSNLQVAELLACMAKN  298 (380)
Q Consensus       232 ~~sK~~~E~~l~~~g~~~~ivRpg~v~gp~~~~~----~--------~~-~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~  298 (380)
                      +.+|..+|++++..++++++|||++||||.....    .        .. .+...  ......++|++|+|++++.++.+
T Consensus       134 ~~sK~~~e~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~Dva~a~~~~~~~  211 (315)
T 2ydy_A          134 GKTKLDGEKAVLENNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMD--HWQQRFPTHVKDVATVCRQLAEK  211 (315)
T ss_dssp             HHHHHHHHHHHHHHCTTCEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEE--CSSBBCCEEHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeec--cCceECcEEHHHHHHHHHHHHHh
Confidence            9999999999999899999999999999865410    0        00 11111  12334689999999999999876


Q ss_pred             C--CCccCcEEEEecCCCCCcchHHHHHHhcCCCCC
Q 016901          299 R--SLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (380)
Q Consensus       299 ~--~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~~  332 (380)
                      +  ....+++||+++++..++.|+++.+.+.+|...
T Consensus       212 ~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~  247 (315)
T 2ydy_A          212 RMLDPSIKGTFHWSGNEQMTKYEMACAIADAFNLPS  247 (315)
T ss_dssp             HHTCTTCCEEEECCCSCCBCHHHHHHHHHHHTTCCC
T ss_pred             hccccCCCCeEEEcCCCcccHHHHHHHHHHHhCCCh
Confidence            4  113478999999999999999999999998754

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.97  E-value=1.2e-30  Score=248.42  Aligned_cols=238  Identities=18%  Similarity=0.106  Sum_probs=178.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEE-EcCCCChhc
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELV-ECDLEKRVQ  156 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~Dl~d~~~  156 (380)
                      +++|+|||||||||||++++++|+++|++|++++|+.++...+.+.+...        .    ..+++++ .+|++|.++
T Consensus         9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--------~----~~~~~~~~~~D~~d~~~   76 (342)
T 1y1p_A            9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAK--------Y----PGRFETAVVEDMLKQGA   76 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH--------S----TTTEEEEECSCTTSTTT
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhcc--------C----CCceEEEEecCCcChHH
Confidence            46789999999999999999999999999999999987765554433211        0    1468888 899999999


Q ss_pred             HHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHH-cCCCEEEEEccCCCCCCCCc---------hh---
Q 016901          157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATI-AKVNHFIMVSSLGTNKFGFP---------AA---  223 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~-~~v~r~V~~SS~~~~~~~~~---------~~---  223 (380)
                      +.++++++|+||||||..... .++...+++|+.|+.+++++|.+ .+++||||+||.+++....+         ..   
T Consensus        77 ~~~~~~~~d~vih~A~~~~~~-~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~  155 (342)
T 1y1p_A           77 YDEVIKGAAGVAHIASVVSFS-NKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNL  155 (342)
T ss_dssp             TTTTTTTCSEEEECCCCCSCC-SCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCH
T ss_pred             HHHHHcCCCEEEEeCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCc
Confidence            999999999999999965432 23445678999999999999984 67899999999876422111         00   


Q ss_pred             -------------hhchhhHHHHHHHHHHHHHHH------CCCCEEEEecCcccCCCccccccc-c-------------e
Q 016901          224 -------------ILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKETH-N-------------I  270 (380)
Q Consensus       224 -------------~~~~~~~Y~~sK~~~E~~l~~------~g~~~~ivRpg~v~gp~~~~~~~~-~-------------~  270 (380)
                                   +..+...|+.+|+++|.+++.      .+++++++|||++|||........ .             .
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~  235 (342)
T 1y1p_A          156 ESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVS  235 (342)
T ss_dssp             HHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCC
T ss_pred             hhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCc
Confidence                         124567899999999998864      278999999999999965321100 0             0


Q ss_pred             eeccCCcccCCCCCHHHHHHHHHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCCCC
Q 016901          271 TLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (380)
Q Consensus       271 ~~~~~~~~~~~~i~~~DvA~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~  331 (380)
                      .+.... ....++|++|+|++++.+++++. ..++.+ ++++...|+.|+++.+.++++..
T Consensus       236 ~~~~~~-~~~~~v~v~Dva~a~~~~~~~~~-~~g~~~-~~~g~~~s~~e~~~~i~~~~~~~  293 (342)
T 1y1p_A          236 PALALM-PPQYYVSAVDIGLLHLGCLVLPQ-IERRRV-YGTAGTFDWNTVLATFRKLYPSK  293 (342)
T ss_dssp             HHHHTC-CSEEEEEHHHHHHHHHHHHHCTT-CCSCEE-EECCEEECHHHHHHHHHHHCTTS
T ss_pred             cccccC-CcCCEeEHHHHHHHHHHHHcCcc-cCCceE-EEeCCCCCHHHHHHHHHHHCCCc
Confidence            001111 23368999999999999998755 334444 45666789999999999998864

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.97  E-value=2.3e-31  Score=253.98  Aligned_cols=233  Identities=15%  Similarity=0.138  Sum_probs=177.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCCh-hcHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR-VQIE  158 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~-G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~-~~~~  158 (380)
                      |+|||||||||||++++++|+++ |++|++++|+..+...+.                  ...+++++.+|++|. +.+.
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~------------------~~~~~~~~~~D~~~~~~~~~   62 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL------------------NHPHFHFVEGDISIHSEWIE   62 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT------------------TCTTEEEEECCTTTCSHHHH
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhh------------------cCCCeEEEeccccCcHHHHH
Confidence            57999999999999999999998 899999999876543211                  115799999999985 5688


Q ss_pred             HHhcCCCEEEEccccCccc--cCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCC-----chhh-------
Q 016901          159 PALGNASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF-----PAAI-------  224 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~~~--~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~-----~~~~-------  224 (380)
                      ++++++|+||||||.....  ..++...+++|+.++.+++++|++.+ ++|||+||.+++....     +..+       
T Consensus        63 ~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~  141 (345)
T 2bll_A           63 YHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPV  141 (345)
T ss_dssp             HHHHHCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCT
T ss_pred             hhccCCCEEEEcccccCccchhcCHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecHHHcCCCCCCCcCCcccccccCcc
Confidence            8999999999999865321  12344567899999999999999988 8999999987643211     1110       


Q ss_pred             hchhhHHHHHHHHHHHHHH----HCCCCEEEEecCcccCCCcccc-------------------cccceeeccCCcccCC
Q 016901          225 LNLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYK-------------------ETHNITLSQEDTLFGG  281 (380)
Q Consensus       225 ~~~~~~Y~~sK~~~E~~l~----~~g~~~~ivRpg~v~gp~~~~~-------------------~~~~~~~~~~~~~~~~  281 (380)
                      ..+.+.|+.+|..+|++++    +.|+++++|||+++|||+....                   ....+.+........+
T Consensus       142 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  221 (345)
T 2bll_A          142 NKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRC  221 (345)
T ss_dssp             TCGGGHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEE
T ss_pred             cCcccccHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEE
Confidence            1345589999999999885    3699999999999999975310                   0011111122222336


Q ss_pred             CCCHHHHHHHHHHHHhCCCC-ccCcEEEEecCC-CCCcchHHHHHHhcCCCCC
Q 016901          282 QVSNLQVAELLACMAKNRSL-SYCKVVEVIAET-TAPLTPMEELLAKIPSQRA  332 (380)
Q Consensus       282 ~i~~~DvA~~i~~~l~~~~~-~~~~~~ni~~~~-~~s~~~~~e~~~~~~~~~~  332 (380)
                      ++|++|+|++++.+++++.. ..+++||+++++ ..|+.|+++.+.+.++...
T Consensus       222 ~i~v~Dva~a~~~~~~~~~~~~~g~~~~i~~~~~~~s~~e~~~~i~~~~g~~~  274 (345)
T 2bll_A          222 FTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHP  274 (345)
T ss_dssp             CEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCT
T ss_pred             EEEHHHHHHHHHHHHhhccccCCCceEEeCCCCCCCCHHHHHHHHHHHhCCCc
Confidence            89999999999999987631 347899999996 7899999999999987654

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.97  E-value=7e-31  Score=258.71  Aligned_cols=242  Identities=16%  Similarity=0.159  Sum_probs=175.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhH---HHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCC
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRA---ENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK  153 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d  153 (380)
                      ...+|+|||||||||||++|+++|+++|++|++++|+.+..   ..+.+.+..+......    .....+++++.+|++|
T Consensus        66 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~----~~~~~~v~~v~~Dl~d  141 (427)
T 4f6c_A           66 HRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETV----EMMLSNIEVIVGDFEC  141 (427)
T ss_dssp             CCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHH----HHHHTTEEEEEECC--
T ss_pred             CCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhcccccc----ccccCceEEEeCCCCC
Confidence            34678999999999999999999999999999999998733   3333333221000000    0001689999999999


Q ss_pred             hhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCC------C---Cchhh
Q 016901          154 RVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKF------G---FPAAI  224 (380)
Q Consensus       154 ~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~------~---~~~~~  224 (380)
                      ++++. ++.++|+||||||.... ..++...+++|+.|+.+++++|.+ ++++|||+||.++..+      .   .+..+
T Consensus       142 ~~~l~-~~~~~d~Vih~A~~~~~-~~~~~~~~~~Nv~g~~~l~~aa~~-~~~~~v~~SS~~~G~~~~~~~~~~~~~E~~~  218 (427)
T 4f6c_A          142 MDDVV-LPENMDTIIHAGARTDH-FGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISVGTYFDIDTEDVTFSEADV  218 (427)
T ss_dssp             -CCCC-CSSCCSEEEECCCCC--------CHHHHHHHHHHHHHHHHHH-TTCEEEEEEEGGGGSEECSSCSCCEECTTCS
T ss_pred             cccCC-CcCCCCEEEECCcccCC-CCCHHHHHHHHHHHHHHHHHHHHh-cCCcEEEECchHhCCCccCCCCCcccccccc
Confidence            88888 78899999999997642 345667789999999999999998 7889999999877110      0   01111


Q ss_pred             ---hchhhHHHHHHHHHHHHHHH---CCCCEEEEecCcccCCCcccccccc-----e-----------eecc-CCcccCC
Q 016901          225 ---LNLFWGVLLWKRKAEEALIA---SGLPYTIVRPGGMERPTDAYKETHN-----I-----------TLSQ-EDTLFGG  281 (380)
Q Consensus       225 ---~~~~~~Y~~sK~~~E~~l~~---~g~~~~ivRpg~v~gp~~~~~~~~~-----~-----------~~~~-~~~~~~~  281 (380)
                         ..+...|+.+|+.+|.++++   .|+++++||||+||||.........     +           .+.. .......
T Consensus       219 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (427)
T 4f6c_A          219 YKGQLLTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMPVD  298 (427)
T ss_dssp             CSSCCCCSHHHHHHHHHHHHHHHHHHTTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEHHHHTCEEC
T ss_pred             ccCCCCCCchHHHHHHHHHHHHHHHHcCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCCccccceEE
Confidence               23567899999999999885   8999999999999999653210000     0           0111 0122336


Q ss_pred             CCCHHHHHHHHHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhc
Q 016901          282 QVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKI  327 (380)
Q Consensus       282 ~i~~~DvA~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~  327 (380)
                      +++++|+|++++.++.++.  .+++||+++++..++.|+++.+.++
T Consensus       299 ~v~v~DvA~ai~~~~~~~~--~g~~~~l~~~~~~s~~el~~~i~~~  342 (427)
T 4f6c_A          299 FSFVDTTARQIVALAQVNT--PQIIYHVLSPNKMPVKSLLECVKRK  342 (427)
T ss_dssp             CEEHHHHHHHHHHHTTSCC--CCSEEEESCSCCEEHHHHHHHHHSS
T ss_pred             EeeHHHHHHHHHHHHcCCC--CCCEEEecCCCCCcHHHHHHHHHHc
Confidence            8999999999999998876  5899999999999999999999984

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.97  E-value=2.2e-30  Score=228.96  Aligned_cols=203  Identities=16%  Similarity=0.146  Sum_probs=159.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      +|+|+||||||+||++++++|+++|++|++++|++++....                   ...+++++.+|++|.+++.+
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~-------------------~~~~~~~~~~D~~~~~~~~~   63 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE-------------------GPRPAHVVVGDVLQAADVDK   63 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS-------------------SCCCSEEEESCTTSHHHHHH
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc-------------------cCCceEEEEecCCCHHHHHH
Confidence            37899999999999999999999999999999997653211                   02578999999999999999


Q ss_pred             HhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCCchhhhchhhHHHHHHHHHH
Q 016901          160 ALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAE  239 (380)
Q Consensus       160 a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E  239 (380)
                      +++++|+||||||....     ....++|+.++.++++++++.++++||++||.+++....  ....+...|+.+|..+|
T Consensus        64 ~~~~~d~vi~~a~~~~~-----~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~--~~~~~~~~y~~~K~~~e  136 (206)
T 1hdo_A           64 TVAGQDAVIVLLGTRND-----LSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPT--KVPPRLQAVTDDHIRMH  136 (206)
T ss_dssp             HHTTCSEEEECCCCTTC-----CSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTT--CSCGGGHHHHHHHHHHH
T ss_pred             HHcCCCEEEECccCCCC-----CCccchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCcc--cccccchhHHHHHHHHH
Confidence            99999999999986533     123468999999999999999999999999987743221  11114567999999999


Q ss_pred             HHHHHCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHHHHhCCCCccCcEEEEecCC
Q 016901          240 EALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAET  313 (380)
Q Consensus       240 ~~l~~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~~~~~~~~~ni~~~~  313 (380)
                      +++++.++++++||||+++ ++... ......+....  .+.+++++|+|++++.+++++. ..+++|++.++.
T Consensus       137 ~~~~~~~i~~~~lrp~~~~-~~~~~-~~~~~~~~~~~--~~~~i~~~Dva~~~~~~~~~~~-~~g~~~~i~~g~  205 (206)
T 1hdo_A          137 KVLRESGLKYVAVMPPHIG-DQPLT-GAYTVTLDGRG--PSRVISKHDLGHFMLRCLTTDE-YDGHSTYPSHQY  205 (206)
T ss_dssp             HHHHHTCSEEEEECCSEEE-CCCCC-SCCEEESSSCS--SCSEEEHHHHHHHHHHTTSCST-TTTCEEEEECCC
T ss_pred             HHHHhCCCCEEEEeCCccc-CCCCC-cceEecccCCC--CCCccCHHHHHHHHHHHhcCcc-ccccceeeeccc
Confidence            9999999999999999983 22111 11111111111  1478999999999999999876 568999999875

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.97  E-value=2.3e-31  Score=255.86  Aligned_cols=230  Identities=13%  Similarity=0.039  Sum_probs=176.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      +++|+|||||||||||++|+++|+++| ++|++++|+......     ..              ..++. +.+|++|.+.
T Consensus        44 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~-----~~--------------~~~~~-~~~d~~~~~~  103 (357)
T 2x6t_A           44 IEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-----VN--------------LVDLN-IADYMDKEDF  103 (357)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGGG-----GG--------------TTTSC-CSEEEEHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcchh-----hc--------------ccCce-EeeecCcHHH
Confidence            356889999999999999999999999 999999998654210     00              02233 6789999999


Q ss_pred             HHHHhc-----CCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCC-----Cchhhhc
Q 016901          157 IEPALG-----NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILN  226 (380)
Q Consensus       157 ~~~a~~-----~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~-----~~~~~~~  226 (380)
                      ++++++     ++|+||||||.......++...+++|+.|+.+++++|.+.++ +|||+||.+++...     .+..+..
T Consensus       104 ~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~-r~V~~SS~~v~g~~~~~~~~E~~~~~  182 (357)
T 2x6t_A          104 LIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEK  182 (357)
T ss_dssp             HHHHHTTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGCSCSSCCCSSGGGCC
T ss_pred             HHHHHhhcccCCCCEEEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcchHHhCCCCCCCcCCcCCCC
Confidence            998886     599999999976543334455688999999999999999998 99999998764321     1223344


Q ss_pred             hhhHHHHHHHHHHHHHHH----CCCCEEEEecCcccCCCccccc---------------ccceeeccCCcc-cCCCCCHH
Q 016901          227 LFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE---------------THNITLSQEDTL-FGGQVSNL  286 (380)
Q Consensus       227 ~~~~Y~~sK~~~E~~l~~----~g~~~~ivRpg~v~gp~~~~~~---------------~~~~~~~~~~~~-~~~~i~~~  286 (380)
                      +...|+.+|..+|++++.    .|+++++|||+++|||+.....               ...+.+...... ...+++++
T Consensus       183 p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  262 (357)
T 2x6t_A          183 PLNVFGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVG  262 (357)
T ss_dssp             CSSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHH
T ss_pred             CCChhHHHHHHHHHHHHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHH
Confidence            567899999999999874    5899999999999999753110               011111122223 44789999


Q ss_pred             HHHHHHHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCCCC
Q 016901          287 QVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (380)
Q Consensus       287 DvA~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~  331 (380)
                      |+|++++.+++++.   +++||+++++..++.|+++.+.+.++..
T Consensus       263 Dva~ai~~~~~~~~---~~~~~i~~~~~~s~~e~~~~i~~~~g~~  304 (357)
T 2x6t_A          263 DVADVNLWFLENGV---SGIFNLGTGRAESFQAVADATLAYHKKG  304 (357)
T ss_dssp             HHHHHHHHHHHHCC---CEEEEESCSCCEEHHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHhcCC---CCeEEecCCCcccHHHHHHHHHHHcCCC
Confidence            99999999998765   7899999999999999999999999875

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.97  E-value=8e-31  Score=249.84  Aligned_cols=229  Identities=13%  Similarity=0.078  Sum_probs=176.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      .++|+|||||||||||++++++|+++|++|++++|+.....+.                 .....+++++.+|++|.+++
T Consensus        19 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----------------l~~~~~~~~~~~Dl~d~~~~   81 (333)
T 2q1w_A           19 SHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREH-----------------LKDHPNLTFVEGSIADHALV   81 (333)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGG-----------------SCCCTTEEEEECCTTCHHHH
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhh-----------------HhhcCCceEEEEeCCCHHHH
Confidence            4678999999999999999999999999999999976432110                 00014789999999999999


Q ss_pred             HHHhcC--CCEEEEccccCccc-cCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCC----CCC-chhhh-chh
Q 016901          158 EPALGN--ASVVICCIGASEKE-VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNK----FGF-PAAIL-NLF  228 (380)
Q Consensus       158 ~~a~~~--~d~Vi~~Ag~~~~~-~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~----~~~-~~~~~-~~~  228 (380)
                      .+++++  +|+||||||..... ..++.  +++|+.++.+++++|.+.++++|||+||.+++.    ... +.... .+.
T Consensus        82 ~~~~~~~~~D~vih~A~~~~~~~~~~~~--~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g~~~~~~~~~~~E~~~p~  159 (333)
T 2q1w_A           82 NQLIGDLQPDAVVHTAASYKDPDDWYND--TLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQPVRLDHPRNPA  159 (333)
T ss_dssp             HHHHHHHCCSEEEECCCCCSCTTCHHHH--HHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGCSCCCSSSBCTTSCCCCT
T ss_pred             HHHHhccCCcEEEECceecCCCccCChH--HHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCcccCCCCcCCCCCCC
Confidence            999987  99999999965431 11222  789999999999999999999999999987743    110 00000 344


Q ss_pred             -hHHHHHHHHHHHHHHH-CCCCEEEEecCcccCCCcc--ccc-------ccceeeccCCcccCCCCCHHHHHHHHHHHHh
Q 016901          229 -WGVLLWKRKAEEALIA-SGLPYTIVRPGGMERPTDA--YKE-------THNITLSQEDTLFGGQVSNLQVAELLACMAK  297 (380)
Q Consensus       229 -~~Y~~sK~~~E~~l~~-~g~~~~ivRpg~v~gp~~~--~~~-------~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~  297 (380)
                       ..|+.+|+++|.+++. .. ++++|||+++|||+..  ...       .......  ......+++++|+|++++.+++
T Consensus       160 ~~~Y~~sK~~~E~~~~~s~~-~~~ilR~~~v~gp~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~Dva~ai~~~~~  236 (333)
T 2q1w_A          160 NSSYAISKSANEDYLEYSGL-DFVTFRLANVVGPRNVSGPLPIFFQRLSEGKKCFV--TKARRDFVFVKDLARATVRAVD  236 (333)
T ss_dssp             TCHHHHHHHHHHHHHHHHTC-CEEEEEESEEESTTCCSSHHHHHHHHHHTTCCCEE--EECEECEEEHHHHHHHHHHHHT
T ss_pred             CCchHHHHHHHHHHHHhhhC-CeEEEeeceEECcCCcCcHHHHHHHHHHcCCeeeC--CCceEeeEEHHHHHHHHHHHHh
Confidence             6899999999999998 76 9999999999999731  000       0000111  1223468999999999999998


Q ss_pred             CCCCccCcEEEEecCCCCCcchHHHHHHhcCCCC
Q 016901          298 NRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (380)
Q Consensus       298 ~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~  331 (380)
                      ++.   +++||++++...++.|+++.+.+.+|..
T Consensus       237 ~~~---g~~~~v~~~~~~s~~e~~~~i~~~~g~~  267 (333)
T 2q1w_A          237 GVG---HGAYHFSSGTDVAIKELYDAVVEAMALP  267 (333)
T ss_dssp             TCC---CEEEECSCSCCEEHHHHHHHHHHHTTCS
T ss_pred             cCC---CCEEEeCCCCCccHHHHHHHHHHHhCCC
Confidence            765   8899999999999999999999999875

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.97  E-value=9.8e-31  Score=249.34  Aligned_cols=237  Identities=17%  Similarity=0.194  Sum_probs=168.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ++++||||||+||||++|+++|+++|++|++++|+.+........ ..+  ..        ...+++++.+|++|.+++.
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~-~~~--~~--------~~~~~~~~~~Dl~d~~~~~   72 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHL-LDL--PK--------AETHLTLWKADLADEGSFD   72 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHH-HTS--TT--------HHHHEEEEECCTTSTTTTH
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHH-Hhc--cc--------CCCeEEEEEcCCCCHHHHH
Confidence            567899999999999999999999999999999987643322211 100  00        0036889999999999999


Q ss_pred             HHhcCCCEEEEccccCccccCCCC-CcchhhHHHHHHHHHHHHHcC-CCEEEEEccCCCCCCCC-------chh------
Q 016901          159 PALGNASVVICCIGASEKEVFDIT-GPYRIDFQATKNLVDAATIAK-VNHFIMVSSLGTNKFGF-------PAA------  223 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~~~~~~~~-~~~~~nv~g~~~ll~a~~~~~-v~r~V~~SS~~~~~~~~-------~~~------  223 (380)
                      ++++++|+|||+|+.......++. ..+++|+.|+.+++++|.+.+ ++||||+||.++.....       +..      
T Consensus        73 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~  152 (337)
T 2c29_D           73 EAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEF  152 (337)
T ss_dssp             HHHTTCSEEEECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHH
T ss_pred             HHHcCCCEEEEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCchhh
Confidence            999999999999986532211211 357899999999999999887 89999999976321110       000      


Q ss_pred             --h-hchhhHHHHHHHHHHHHHH----HCCCCEEEEecCcccCCCccccccccee-----eccCCccc-----CCCCCHH
Q 016901          224 --I-LNLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKETHNIT-----LSQEDTLF-----GGQVSNL  286 (380)
Q Consensus       224 --~-~~~~~~Y~~sK~~~E~~l~----~~g~~~~ivRpg~v~gp~~~~~~~~~~~-----~~~~~~~~-----~~~i~~~  286 (380)
                        . ..+.+.|+.+|.++|.+++    ++|+++++|||+++|||+........+.     +......+     ..++|++
T Consensus       153 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~v~  232 (337)
T 2c29_D          153 CRAKKMTAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLD  232 (337)
T ss_dssp             HHHHCCTTHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGGGHHHHTEEEEEEHH
T ss_pred             hcccCCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCccccccCCCCEEEHH
Confidence              0 0134579999999998875    3699999999999999964321000000     00111111     1389999


Q ss_pred             HHHHHHHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCC
Q 016901          287 QVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPS  329 (380)
Q Consensus       287 DvA~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~  329 (380)
                      |+|++++.+++++..  ++.|++++ ...++.|+++.+.+...
T Consensus       233 Dva~a~~~~~~~~~~--~~~~~~~~-~~~s~~e~~~~i~~~~~  272 (337)
T 2c29_D          233 DLCNAHIYLFENPKA--EGRYICSS-HDCIILDLAKMLREKYP  272 (337)
T ss_dssp             HHHHHHHHHHHCTTC--CEEEEECC-EEEEHHHHHHHHHHHCT
T ss_pred             HHHHHHHHHhcCccc--CceEEEeC-CCCCHHHHHHHHHHHCC
Confidence            999999999987552  45676544 45788999999998764

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.97  E-value=3.5e-31  Score=246.67  Aligned_cols=212  Identities=12%  Similarity=0.090  Sum_probs=173.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      |+|||||||||||+++++.|+++|++|++++|.                                  .+|++|.+++.++
T Consensus         6 m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~----------------------------------~~D~~d~~~~~~~   51 (287)
T 3sc6_A            6 ERVIITGANGQLGKQLQEELNPEEYDIYPFDKK----------------------------------LLDITNISQVQQV   51 (287)
T ss_dssp             EEEEEESTTSHHHHHHHHHSCTTTEEEEEECTT----------------------------------TSCTTCHHHHHHH
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCEEEEeccc----------------------------------ccCCCCHHHHHHH
Confidence            489999999999999999999999999999982                                  2799999999999


Q ss_pred             hc--CCCEEEEccccCcccc--CCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCC-----CchhhhchhhHH
Q 016901          161 LG--NASVVICCIGASEKEV--FDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNLFWGV  231 (380)
Q Consensus       161 ~~--~~d~Vi~~Ag~~~~~~--~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~-----~~~~~~~~~~~Y  231 (380)
                      ++  ++|+||||||......  .++...+++|+.++.+++++|++.++ ||||+||.+++...     .+..+..+.+.|
T Consensus        52 ~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y  130 (287)
T 3sc6_A           52 VQEIRPHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGA-KLVYISTDYVFQGDRPEGYDEFHNPAPINIY  130 (287)
T ss_dssp             HHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCCCCSSCBCTTSCCCCCSHH
T ss_pred             HHhcCCCEEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchhhhcCCCCCCCCCCCCCCCCCCHH
Confidence            98  7999999999764322  34455688999999999999999998 79999998775321     122334566789


Q ss_pred             HHHHHHHHHHHHHCCCCEEEEecCcccCCCcccc---------cccceeeccCCcccCCCCCHHHHHHHHHHHHhCCCCc
Q 016901          232 LLWKRKAEEALIASGLPYTIVRPGGMERPTDAYK---------ETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLS  302 (380)
Q Consensus       232 ~~sK~~~E~~l~~~g~~~~ivRpg~v~gp~~~~~---------~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~~~~  302 (380)
                      +.+|..+|++++..+.+++++||+++|||++...         ....+.+..  .....++|++|+|++++.+++++.  
T Consensus       131 ~~sK~~~E~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~~--  206 (287)
T 3sc6_A          131 GASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMIRLGKEREEISVVA--DQIGSPTYVADLNVMINKLIHTSL--  206 (287)
T ss_dssp             HHHHHHHHHHHHHHCSSEEEEEECSEECSSSCCHHHHHHHHHTTCSEEEEEC--SCEECCEEHHHHHHHHHHHHTSCC--
T ss_pred             HHHHHHHHHHHHHhCCCcEEEeeeeecCCCCCcHHHHHHHHHHcCCCeEeec--CcccCceEHHHHHHHHHHHHhCCC--
Confidence            9999999999999888999999999999964321         011122222  134478999999999999999876  


Q ss_pred             cCcEEEEecCCCCCcchHHHHHHhcCCCCC
Q 016901          303 YCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (380)
Q Consensus       303 ~~~~~ni~~~~~~s~~~~~e~~~~~~~~~~  332 (380)
                       +++||+++++..+..|+++.+.+.+|...
T Consensus       207 -~~~~~i~~~~~~s~~e~~~~i~~~~g~~~  235 (287)
T 3sc6_A          207 -YGTYHVSNTGSCSWFEFAKKIFSYANMKV  235 (287)
T ss_dssp             -CEEEECCCBSCEEHHHHHHHHHHHHTCCC
T ss_pred             -CCeEEEcCCCcccHHHHHHHHHHHcCCCc
Confidence             77999999999999999999999998754

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.97  E-value=3.3e-31  Score=254.71  Aligned_cols=234  Identities=12%  Similarity=0.052  Sum_probs=178.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCCch--hHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSVQ--RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~-G~~V~~l~R~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      |+||||||+||||++|+++|+++ |++|++++|+..  ..+.+.               ......+++++.+|++|.+++
T Consensus         1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~---------------~~~~~~~~~~~~~Dl~d~~~~   65 (361)
T 1kew_A            1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLS---------------DISESNRYNFEHADICDSAEI   65 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGT---------------TTTTCTTEEEEECCTTCHHHH
T ss_pred             CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhh---------------hhhcCCCeEEEECCCCCHHHH
Confidence            47999999999999999999998 799999999752  111110               000125789999999999999


Q ss_pred             HHHhc--CCCEEEEccccCcc--ccCCCCCcchhhHHHHHHHHHHHHHc--CCC-------EEEEEccCCCCCCCC----
Q 016901          158 EPALG--NASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIA--KVN-------HFIMVSSLGTNKFGF----  220 (380)
Q Consensus       158 ~~a~~--~~d~Vi~~Ag~~~~--~~~~~~~~~~~nv~g~~~ll~a~~~~--~v~-------r~V~~SS~~~~~~~~----  220 (380)
                      .++++  ++|+||||||....  ...++...+++|+.|+.+++++|.+.  +++       +|||+||.+++....    
T Consensus        66 ~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~  145 (361)
T 1kew_A           66 TRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDE  145 (361)
T ss_dssp             HHHHHHHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGG
T ss_pred             HHHHhhcCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCccccc
Confidence            99997  89999999996532  12345566899999999999999988  877       999999976643211    


Q ss_pred             -----------chhhhchhhHHHHHHHHHHHHHHH----CCCCEEEEecCcccCCCccccc-----------ccceeecc
Q 016901          221 -----------PAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE-----------THNITLSQ  274 (380)
Q Consensus       221 -----------~~~~~~~~~~Y~~sK~~~E~~l~~----~g~~~~ivRpg~v~gp~~~~~~-----------~~~~~~~~  274 (380)
                                 +..+..+...|+.+|+++|.+++.    .|+++++|||+++|||+.....           ...+.+..
T Consensus       146 ~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (361)
T 1kew_A          146 VENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYG  225 (361)
T ss_dssp             SCTTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEET
T ss_pred             ccccccCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCceEcC
Confidence                       112334567899999999998874    5999999999999999753110           01111112


Q ss_pred             CCcccCCCCCHHHHHHHHHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCCCC
Q 016901          275 EDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (380)
Q Consensus       275 ~~~~~~~~i~~~DvA~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~  331 (380)
                      .......++|++|+|++++.+++++.  .+++||++++...++.|+++.+.+.++..
T Consensus       226 ~~~~~~~~i~v~Dva~a~~~~~~~~~--~g~~~~v~~~~~~s~~e~~~~i~~~~g~~  280 (361)
T 1kew_A          226 KGDQIRDWLYVEDHARALHMVVTEGK--AGETYNIGGHNEKKNLDVVFTICDLLDEI  280 (361)
T ss_dssp             TSCCEEEEEEHHHHHHHHHHHHHHCC--TTCEEEECCCCEEEHHHHHHHHHHHHHHH
T ss_pred             CCceeEeeEEHHHHHHHHHHHHhCCC--CCCEEEecCCCeeeHHHHHHHHHHHhCCc
Confidence            22233468999999999999998653  47899999999999999999999988754

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.97  E-value=1.6e-30  Score=232.61  Aligned_cols=206  Identities=15%  Similarity=0.127  Sum_probs=149.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      |+|||||||||||++++++|+++|++|++++|++++...+.                    .+++++.+|++|.++  ++
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--------------------~~~~~~~~D~~d~~~--~~   58 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH--------------------KDINILQKDIFDLTL--SD   58 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC--------------------SSSEEEECCGGGCCH--HH
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc--------------------CCCeEEeccccChhh--hh
Confidence            57999999999999999999999999999999987765431                    578999999999887  88


Q ss_pred             hcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCCc------hhhhchhhHHHHH
Q 016901          161 LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFP------AAILNLFWGVLLW  234 (380)
Q Consensus       161 ~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~------~~~~~~~~~Y~~s  234 (380)
                      +.++|+||||||....       ...+|+.++++++++|++.+++|||++||.++......      ..+..+...|+.+
T Consensus        59 ~~~~d~vi~~ag~~~~-------~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~~  131 (221)
T 3ew7_A           59 LSDQNVVVDAYGISPD-------EAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTA  131 (221)
T ss_dssp             HTTCSEEEECCCSSTT-------TTTSHHHHHHHHHHHHCSCCSSEEEEECCCC-------------------CCCSCCH
T ss_pred             hcCCCEEEECCcCCcc-------ccchHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCCHHHHHHH
Confidence            8999999999987422       25679999999999999999999999999866322111      1122234458899


Q ss_pred             HHHHHHH--HH--HCCCCEEEEecCcccCCCcccccccceeeccCC----cccCCCCCHHHHHHHHHHHHhCCCCccCcE
Q 016901          235 KRKAEEA--LI--ASGLPYTIVRPGGMERPTDAYKETHNITLSQED----TLFGGQVSNLQVAELLACMAKNRSLSYCKV  306 (380)
Q Consensus       235 K~~~E~~--l~--~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~----~~~~~~i~~~DvA~~i~~~l~~~~~~~~~~  306 (380)
                      |...|.+  ++  +.|+++++||||++|||+....   .+......    .....+++++|+|++++.+++++. ..++.
T Consensus       132 k~~~e~~~~~~~~~~gi~~~ivrp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~-~~g~~  207 (221)
T 3ew7_A          132 RAQAKQLEHLKSHQAEFSWTYISPSAMFEPGERTG---DYQIGKDHLLFGSDGNSFISMEDYAIAVLDEIERPN-HLNEH  207 (221)
T ss_dssp             HHHHHHHHHHHTTTTTSCEEEEECSSCCCCC------------------------CCCHHHHHHHHHHHHHSCS-CTTSE
T ss_pred             HHHHHHHHHHHhhccCccEEEEeCcceecCCCccC---ceEeccccceecCCCCceEeHHHHHHHHHHHHhCcc-ccCCE
Confidence            9999876  66  6899999999999999843211   11111100    001258999999999999999987 67899


Q ss_pred             EEEecCCCCCcch
Q 016901          307 VEVIAETTAPLTP  319 (380)
Q Consensus       307 ~ni~~~~~~s~~~  319 (380)
                      ||++++...+..|
T Consensus       208 ~~~~~~~~~~~~~  220 (221)
T 3ew7_A          208 FTVAGKLEHHHHH  220 (221)
T ss_dssp             EECCC--------
T ss_pred             EEECCCCcccccc
Confidence            9999998776543

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.97  E-value=4.1e-31  Score=248.50  Aligned_cols=224  Identities=14%  Similarity=0.044  Sum_probs=167.7

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCCchhH--HHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           82 LAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRA--ENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        82 ~vlVtGatG~iG~~lv~~Ll~~G-~~V~~l~R~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      +|||||||||||++++++|+++| ++|++++|+....  ..+                     .++. +.+|++|.+.+.
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~---------------------~~~~-~~~d~~~~~~~~   58 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNL---------------------VDLN-IADYMDKEDFLI   58 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHH---------------------HTSC-CSEEEEHHHHHH
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchhhhc---------------------Ccce-eccccccHHHHH
Confidence            48999999999999999999999 9999999986542  111                     1233 678999999999


Q ss_pred             HHhcC-----CCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCC-----Cchhhhchh
Q 016901          159 PALGN-----ASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNLF  228 (380)
Q Consensus       159 ~a~~~-----~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~-----~~~~~~~~~  228 (380)
                      +++++     +|+||||||.......++...+++|+.++.+++++|++.++ +|||+||.+++...     .+..+..+.
T Consensus        59 ~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~  137 (310)
T 1eq2_A           59 QIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPL  137 (310)
T ss_dssp             HHHTTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCS
T ss_pred             HHHhccccCCCcEEEECcccccCcccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeHHHhCCCCCCCCCCCCCCCCC
Confidence            99875     99999999976543334455688999999999999999999 99999998764321     122334556


Q ss_pred             hHHHHHHHHHHHHHHH----CCCCEEEEecCcccCCCccccc---------------ccceeeccCCcc-cCCCCCHHHH
Q 016901          229 WGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE---------------THNITLSQEDTL-FGGQVSNLQV  288 (380)
Q Consensus       229 ~~Y~~sK~~~E~~l~~----~g~~~~ivRpg~v~gp~~~~~~---------------~~~~~~~~~~~~-~~~~i~~~Dv  288 (380)
                      ..|+.+|..+|.+++.    .|++++++|||++|||+.....               ...+.+...... ..+++|++|+
T Consensus       138 ~~Y~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dv  217 (310)
T 1eq2_A          138 NVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDV  217 (310)
T ss_dssp             SHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHH
Confidence            7899999999999874    5899999999999999753210               001111122223 4478999999


Q ss_pred             HHHHHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCCCC
Q 016901          289 AELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (380)
Q Consensus       289 A~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~  331 (380)
                      |++++.+++++.   +++||+++++..++.|+++.+.+.++..
T Consensus       218 a~~~~~~~~~~~---~~~~~i~~~~~~s~~e~~~~i~~~~g~~  257 (310)
T 1eq2_A          218 ADVNLWFLENGV---SGIFNLGTGRAESFQAVADATLAYHKKG  257 (310)
T ss_dssp             HHHHHHHHHHCC---CEEEEESCSCCBCHHHHHHHC-------
T ss_pred             HHHHHHHHhcCC---CCeEEEeCCCccCHHHHHHHHHHHcCCC
Confidence            999999998765   7899999999999999999999998865

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.97  E-value=3.7e-30  Score=246.52  Aligned_cols=226  Identities=15%  Similarity=0.144  Sum_probs=174.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      .+|+|||||||||||++|++.|+++|++|++++|+.+......+.+..+.            ..+++++.+|++|.+++.
T Consensus         9 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~------------~~~v~~~~~Dl~d~~~l~   76 (346)
T 3i6i_A            9 PKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALE------------DKGAIIVYGLINEQEAME   76 (346)
T ss_dssp             --CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHH------------HTTCEEEECCTTCHHHHH
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHH------------hCCcEEEEeecCCHHHHH
Confidence            45789999999999999999999999999999998722111111111110            067999999999999999


Q ss_pred             HHhc--CCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcC-CCEEEEEccCCCCCCCCchhhhchhhHHHHHH
Q 016901          159 PALG--NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK-VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWK  235 (380)
Q Consensus       159 ~a~~--~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~-v~r~V~~SS~~~~~~~~~~~~~~~~~~Y~~sK  235 (380)
                      ++++  ++|+|||+||..             |+.++.+++++|++.+ +++||+ |+++...  ....+..+...|+.+|
T Consensus        77 ~~~~~~~~d~Vi~~a~~~-------------n~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~--~e~~~~~p~~~y~~sK  140 (346)
T 3i6i_A           77 KILKEHEIDIVVSTVGGE-------------SILDQIALVKAMKAVGTIKRFLP-SEFGHDV--NRADPVEPGLNMYREK  140 (346)
T ss_dssp             HHHHHTTCCEEEECCCGG-------------GGGGHHHHHHHHHHHCCCSEEEC-SCCSSCT--TTCCCCTTHHHHHHHH
T ss_pred             HHHhhCCCCEEEECCchh-------------hHHHHHHHHHHHHHcCCceEEee-cccCCCC--CccCcCCCcchHHHHH
Confidence            9999  999999999852             8889999999999999 999987 7665421  1122334567899999


Q ss_pred             HHHHHHHHHCCCCEEEEecCcccCCCcccc--------cccceeeccCCcccCCCCCHHHHHHHHHHHHhCCCCccCcEE
Q 016901          236 RKAEEALIASGLPYTIVRPGGMERPTDAYK--------ETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVV  307 (380)
Q Consensus       236 ~~~E~~l~~~g~~~~ivRpg~v~gp~~~~~--------~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~~~~~~~~~  307 (380)
                      +.+|+++++.|++++++|||+++|......        ....+.+.........+++++|+|++++.++.++. ..+++|
T Consensus       141 ~~~e~~l~~~g~~~tivrpg~~~g~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~~-~~~~~~  219 (346)
T 3i6i_A          141 RRVRQLVEESGIPFTYICCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVR-TLNKSV  219 (346)
T ss_dssp             HHHHHHHHHTTCCBEEEECCEESSCCCSCC-----CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCGG-GTTEEE
T ss_pred             HHHHHHHHHcCCCEEEEEecccccccCccccccccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhCcc-ccCeEE
Confidence            999999999999999999999998642110        11122222333333468999999999999999876 558889


Q ss_pred             EEec-CCCCCcchHHHHHHhcCCCCCC
Q 016901          308 EVIA-ETTAPLTPMEELLAKIPSQRAE  333 (380)
Q Consensus       308 ni~~-~~~~s~~~~~e~~~~~~~~~~~  333 (380)
                      ++++ ++..|..|++++++++.|....
T Consensus       220 ~i~g~~~~~s~~e~~~~~~~~~g~~~~  246 (346)
T 3i6i_A          220 HFRPSCNCLNINELASVWEKKIGRTLP  246 (346)
T ss_dssp             ECCCGGGEECHHHHHHHHHHHHTSCCC
T ss_pred             EEeCCCCCCCHHHHHHHHHHHHCCCCc
Confidence            9985 5788999999999999987643

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.97  E-value=1e-30  Score=249.26  Aligned_cols=237  Identities=13%  Similarity=-0.004  Sum_probs=180.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ++|+|||||||||||++++++|+++|++|++++|+.++...  ..+..+.           ...+++++.+|++|.+++.
T Consensus         2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~--~~~~~~~-----------~~~~~~~~~~Dl~d~~~~~   68 (345)
T 2z1m_A            2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS--WRLKELG-----------IENDVKIIHMDLLEFSNII   68 (345)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT--HHHHHTT-----------CTTTEEECCCCTTCHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCccccc--ccHhhcc-----------ccCceeEEECCCCCHHHHH
Confidence            46799999999999999999999999999999998764321  1111110           0147899999999999999


Q ss_pred             HHhcC--CCEEEEccccCccc--cCCCCCcchhhHHHHHHHHHHHHHcCC-CEEEEEccCCCCCCC-----Cchhhhchh
Q 016901          159 PALGN--ASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKV-NHFIMVSSLGTNKFG-----FPAAILNLF  228 (380)
Q Consensus       159 ~a~~~--~d~Vi~~Ag~~~~~--~~~~~~~~~~nv~g~~~ll~a~~~~~v-~r~V~~SS~~~~~~~-----~~~~~~~~~  228 (380)
                      +++++  +|+||||||.....  ..++...+++|+.|+.+++++|.+.++ ++|||+||.+++...     .+..+..+.
T Consensus        69 ~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~  148 (345)
T 2z1m_A           69 RTIEKVQPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQEIPQTEKTPFYPR  148 (345)
T ss_dssp             HHHHHHCCSEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCSSSSBCTTSCCCCC
T ss_pred             HHHHhcCCCEEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCCCCccCCCCCC
Confidence            99875  69999999965322  234455688999999999999998887 899999998764321     112233456


Q ss_pred             hHHHHHHHHHHHHHHH----CCCCEEEEecCcccCCCcccccc-------------c--ceeeccCCcccCCCCCHHHHH
Q 016901          229 WGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKET-------------H--NITLSQEDTLFGGQVSNLQVA  289 (380)
Q Consensus       229 ~~Y~~sK~~~E~~l~~----~g~~~~ivRpg~v~gp~~~~~~~-------------~--~~~~~~~~~~~~~~i~~~DvA  289 (380)
                      ..|+.+|+.+|.+++.    .+++++++|+.++|||+......             .  ............+++|++|+|
T Consensus       149 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva  228 (345)
T 2z1m_A          149 SPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYV  228 (345)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHH
Confidence            6899999999998764    58999999999999996422100             0  000111122233589999999


Q ss_pred             HHHHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCCCC
Q 016901          290 ELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (380)
Q Consensus       290 ~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~  331 (380)
                      ++++.+++++.   +++||+++++..++.|+++.+.+.+|..
T Consensus       229 ~a~~~~~~~~~---~~~~~i~~~~~~s~~e~~~~i~~~~g~~  267 (345)
T 2z1m_A          229 EAMWLMMQQPE---PDDYVIATGETHTVREFVEKAAKIAGFD  267 (345)
T ss_dssp             HHHHHHHTSSS---CCCEEECCSCCEEHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHhCCC---CceEEEeCCCCccHHHHHHHHHHHhCCC
Confidence            99999998765   4789999999999999999999999865

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.97  E-value=3.7e-30  Score=257.24  Aligned_cols=250  Identities=18%  Similarity=0.130  Sum_probs=180.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHC---CCeEEEEeCCchhHHHHHHHHHhhhhcc--cccccCCCCCCceEEEEcCCC
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKL---GFRVRAGVRSVQRAENLVQSVKQMKLDG--ELANKGIQPVEMLELVECDLE  152 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~---G~~V~~l~R~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~~~~Dl~  152 (380)
                      ..+|+|||||||||||++|+++|+++   |++|++++|+.+......+..+.+.-..  ...........+++++.+|++
T Consensus        71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~  150 (478)
T 4dqv_A           71 PELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKS  150 (478)
T ss_dssp             SCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECC
Confidence            36789999999999999999999999   8999999998876543332221110000  000000001158999999998


Q ss_pred             ------ChhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCCc-----
Q 016901          153 ------KRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFP-----  221 (380)
Q Consensus       153 ------d~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~-----  221 (380)
                            |.+.+.++++++|+||||||....  .++...+++|+.|+.+++++|.+.++++|||+||.+++....+     
T Consensus       151 ~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~--~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~~~~~~~~~~E  228 (478)
T 4dqv_A          151 EPDLGLDQPMWRRLAETVDLIVDSAAMVNA--FPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAIEPSAFTE  228 (478)
T ss_dssp             SGGGGCCHHHHHHHHHHCCEEEECCSSCSB--SSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGGTTSCTTTCCS
T ss_pred             CcccCCCHHHHHHHHcCCCEEEECccccCC--cCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhcCccCCCCcCC
Confidence                  556788999999999999997654  5566778999999999999999999999999999876432111     


Q ss_pred             hhhhchh-----------hHHHHHHHHHHHHHHH----CCCCEEEEecCcccCCCccc---ccccce-----------ee
Q 016901          222 AAILNLF-----------WGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAY---KETHNI-----------TL  272 (380)
Q Consensus       222 ~~~~~~~-----------~~Y~~sK~~~E~~l~~----~g~~~~ivRpg~v~gp~~~~---~~~~~~-----------~~  272 (380)
                      +....+.           ..|+.+|+.+|.++++    .|+++++||||+|||+....   .....+           ..
T Consensus       229 ~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~~~~~~g~~  308 (478)
T 4dqv_A          229 DADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSLMATGIA  308 (478)
T ss_dssp             SSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHHHHHHHHHCEE
T ss_pred             cccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHHHHHHHHcCcc
Confidence            1111122           3499999999999875    59999999999999984310   000000           00


Q ss_pred             cc----C------CcccCCCCCHHHHHHHHHHHHhC----CCCccCcEEEEecCCC--CCcchHHHHHHhcCCCC
Q 016901          273 SQ----E------DTLFGGQVSNLQVAELLACMAKN----RSLSYCKVVEVIAETT--APLTPMEELLAKIPSQR  331 (380)
Q Consensus       273 ~~----~------~~~~~~~i~~~DvA~~i~~~l~~----~~~~~~~~~ni~~~~~--~s~~~~~e~~~~~~~~~  331 (380)
                      +.    .      .....+++|++|+|++++.++.+    +. ..+++||+++++.  .++.|+++++.++ +..
T Consensus       309 P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~-~~~~~ynv~~~~~~~~s~~el~~~l~~~-g~~  381 (478)
T 4dqv_A          309 PRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSL-AGFATYHVMNPHDDGIGLDEYVDWLIEA-GYP  381 (478)
T ss_dssp             ESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCC-CSEEEEEESCCCCSSCSHHHHHHHHHHT-TCS
T ss_pred             cccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCC-CCCceEEecCCCCCCcCHHHHHHHHHHc-CCC
Confidence            00    0      02233679999999999999986    33 4588999999998  8999999999996 543

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.97  E-value=9.5e-31  Score=247.50  Aligned_cols=221  Identities=14%  Similarity=0.079  Sum_probs=173.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ++|+|||||||||||++|+++|+++|++|+++.|+.                                 .+|++|.+++.
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~---------------------------------~~D~~d~~~~~   48 (321)
T 1e6u_A            2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD---------------------------------ELNLLDSRAVH   48 (321)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT---------------------------------TCCTTCHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc---------------------------------cCCccCHHHHH
Confidence            457899999999999999999999999999987752                                 27999999999


Q ss_pred             HHhc--CCCEEEEccccCcc---ccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCC-----chh----h
Q 016901          159 PALG--NASVVICCIGASEK---EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF-----PAA----I  224 (380)
Q Consensus       159 ~a~~--~~d~Vi~~Ag~~~~---~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~-----~~~----~  224 (380)
                      ++++  ++|+||||||....   ...++...+++|+.++.+++++|++.++++|||+||.+++....     +..    .
T Consensus        49 ~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~  128 (321)
T 1e6u_A           49 DFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGT  128 (321)
T ss_dssp             HHHHHHCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSC
T ss_pred             HHHHhcCCCEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHcCCCCCCCcCccccccCC
Confidence            9998  99999999986531   12234456789999999999999999999999999987753211     111    2


Q ss_pred             hch-hhHHHHHHHHHHHHHHH----CCCCEEEEecCcccCCCccccc--------------c------cceeeccCCccc
Q 016901          225 LNL-FWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE--------------T------HNITLSQEDTLF  279 (380)
Q Consensus       225 ~~~-~~~Y~~sK~~~E~~l~~----~g~~~~ivRpg~v~gp~~~~~~--------------~------~~~~~~~~~~~~  279 (380)
                      ..+ ...|+.+|..+|++++.    .|+++++|||+++|||+.....              .      ..+.+.......
T Consensus       129 ~~p~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~  208 (321)
T 1e6u_A          129 LEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPM  208 (321)
T ss_dssp             CCGGGHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCE
T ss_pred             CCCCCCccHHHHHHHHHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEE
Confidence            233 35899999999998875    5999999999999999764210              0      112222222333


Q ss_pred             CCCCCHHHHHHHHHHHHhCCCCc-------cCcEEEEecCCCCCcchHHHHHHhcCCCCC
Q 016901          280 GGQVSNLQVAELLACMAKNRSLS-------YCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (380)
Q Consensus       280 ~~~i~~~DvA~~i~~~l~~~~~~-------~~~~~ni~~~~~~s~~~~~e~~~~~~~~~~  332 (380)
                      .+++|++|+|++++.+++++...       .+++||+++++..++.|+++.+.+.++...
T Consensus       209 ~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~  268 (321)
T 1e6u_A          209 REFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKG  268 (321)
T ss_dssp             ECEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCS
T ss_pred             EEeEEHHHHHHHHHHHHhCcccccccccccCCceEEeCCCCCccHHHHHHHHHHHhCCCC
Confidence            46899999999999999886521       268999999999999999999999988653

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.97  E-value=1.7e-30  Score=251.32  Aligned_cols=237  Identities=15%  Similarity=-0.016  Sum_probs=177.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchh-----HHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCCh
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR-----AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~  154 (380)
                      +|+|||||||||||++++++|+++|++|++++|+.+.     ...+.....            .....+++++.+|++|.
T Consensus        24 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~------------~~~~~~~~~~~~Dl~d~   91 (375)
T 1t2a_A           24 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQ------------AHIEGNMKLHYGDLTDS   91 (375)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------------------CEEEEECCTTCH
T ss_pred             CcEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhc------------cccCCCceEEEccCCCH
Confidence            3789999999999999999999999999999998643     111100000            00115789999999999


Q ss_pred             hcHHHHhcC--CCEEEEccccCccc--cCCCCCcchhhHHHHHHHHHHHHHcCC---CEEEEEccCCCCCCC-----Cch
Q 016901          155 VQIEPALGN--ASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKV---NHFIMVSSLGTNKFG-----FPA  222 (380)
Q Consensus       155 ~~~~~a~~~--~d~Vi~~Ag~~~~~--~~~~~~~~~~nv~g~~~ll~a~~~~~v---~r~V~~SS~~~~~~~-----~~~  222 (380)
                      +++.+++++  +|+||||||.....  ..++...+++|+.|+.+++++|.+.++   ++|||+||.+++...     .+.
T Consensus        92 ~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~  171 (375)
T 1t2a_A           92 TCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKET  171 (375)
T ss_dssp             HHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTT
T ss_pred             HHHHHHHHhcCCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCCCCcc
Confidence            999999875  79999999965322  223445678999999999999999987   899999998774321     112


Q ss_pred             hhhchhhHHHHHHHHHHHHHHH----CCCCEEEEecCcccCCCccccc-------------cc--ceeeccCCcccCCCC
Q 016901          223 AILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE-------------TH--NITLSQEDTLFGGQV  283 (380)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~~----~g~~~~ivRpg~v~gp~~~~~~-------------~~--~~~~~~~~~~~~~~i  283 (380)
                      .+..+...|+.+|+++|.+++.    .+++++++||+++|||+.....             ..  ............+++
T Consensus       172 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i  251 (375)
T 1t2a_A          172 TPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWG  251 (375)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCE
T ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeE
Confidence            2334567899999999998864    5999999999999998642100             00  001111222334689


Q ss_pred             CHHHHHHHHHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCCCC
Q 016901          284 SNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (380)
Q Consensus       284 ~~~DvA~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~  331 (380)
                      |++|+|++++.+++++.   +++||+++++..++.|+++.+.+.+|..
T Consensus       252 ~v~Dva~a~~~~~~~~~---~~~~ni~~~~~~s~~e~~~~i~~~~g~~  296 (375)
T 1t2a_A          252 HAKDYVEAMWLMLQNDE---PEDFVIATGEVHSVREFVEKSFLHIGKT  296 (375)
T ss_dssp             EHHHHHHHHHHHHHSSS---CCCEEECCSCCEEHHHHHHHHHHHTTCC
T ss_pred             EHHHHHHHHHHHHhcCC---CceEEEeCCCcccHHHHHHHHHHHhCCC
Confidence            99999999999998765   4789999999999999999999998865

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.97  E-value=1.9e-30  Score=239.81  Aligned_cols=213  Identities=17%  Similarity=0.068  Sum_probs=170.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ++|+||||||+||||++++++|+++|++|++++|++.+..                      ..+++++.+|++|.+++.
T Consensus         2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~----------------------~~~~~~~~~Dl~d~~~~~   59 (267)
T 3rft_A            2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA----------------------GPNEECVQCDLADANAVN   59 (267)
T ss_dssp             CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC----------------------CTTEEEEECCTTCHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc----------------------CCCCEEEEcCCCCHHHHH
Confidence            4578999999999999999999999999999999875422                      167999999999999999


Q ss_pred             HHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCC------CchhhhchhhHHH
Q 016901          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG------FPAAILNLFWGVL  232 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~------~~~~~~~~~~~Y~  232 (380)
                      ++++++|+||||||...  ..++...+++|+.|+.++++++++.+++||||+||..++...      .+..+..+...|+
T Consensus        60 ~~~~~~D~vi~~Ag~~~--~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~~Y~  137 (267)
T 3rft_A           60 AMVAGCDGIVHLGGISV--EKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTERLGPDVPARPDGLYG  137 (267)
T ss_dssp             HHHTTCSEEEECCSCCS--CCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCSHHH
T ss_pred             HHHcCCCEEEECCCCcC--cCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCCCCCCCCCCCCCCCChHH
Confidence            99999999999999742  233455689999999999999999999999999998664211      1113344557899


Q ss_pred             HHHHHHHHHHH----HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHHHHhCCCCccCcEEE
Q 016901          233 LWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVE  308 (380)
Q Consensus       233 ~sK~~~E~~l~----~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~~~~~~~~~n  308 (380)
                      .+|+.+|.+++    +.|+++++||||.++|+...            ......+++++|+++++..+++.+. ..+.+++
T Consensus       138 ~sK~~~e~~~~~~a~~~g~~~~~vr~~~v~~~~~~------------~~~~~~~~~~~d~a~~~~~~~~~~~-~~~~~~~  204 (267)
T 3rft_A          138 VSKCFGENLARMYFDKFGQETALVRIGSCTPEPNN------------YRMLSTWFSHDDFVSLIEAVFRAPV-LGCPVVW  204 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCEEEEEECBCSSSCCS------------TTHHHHBCCHHHHHHHHHHHHHCSC-CCSCEEE
T ss_pred             HHHHHHHHHHHHHHHHhCCeEEEEEeecccCCCCC------------CCceeeEEcHHHHHHHHHHHHhCCC-CCceEEE
Confidence            99999998875    57999999999999987321            1223357999999999999999877 4567888


Q ss_pred             EecCCCCCcchHHHHHHhcCCC
Q 016901          309 VIAETTAPLTPMEELLAKIPSQ  330 (380)
Q Consensus       309 i~~~~~~s~~~~~e~~~~~~~~  330 (380)
                      +.+++..+..++...  +..|.
T Consensus       205 ~~s~~~~~~~~~~~~--~~~g~  224 (267)
T 3rft_A          205 GASANDAGWWDNSHL--GFLGW  224 (267)
T ss_dssp             ECCCCTTCCBCCGGG--GGGCC
T ss_pred             EeCCCCCCcccChhH--HHCCC
Confidence            998887766665433  44554

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.97  E-value=2.9e-30  Score=240.03  Aligned_cols=211  Identities=20%  Similarity=0.214  Sum_probs=168.9

Q ss_pred             eEEEEcCCChHHHHHHHHHHHC--CCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           82 LAFVAGATGKVGSRTVRELLKL--GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        82 ~vlVtGatG~iG~~lv~~Ll~~--G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      +|||||||||||++++++|+++  |++|++++|++++...+..                   .+++++.+|++|++++.+
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~-------------------~~~~~~~~D~~d~~~~~~   61 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAA-------------------QGITVRQADYGDEAALTS   61 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHH-------------------TTCEEEECCTTCHHHHHH
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhc-------------------CCCeEEEcCCCCHHHHHH
Confidence            4899999999999999999998  9999999999876554432                   568899999999999999


Q ss_pred             HhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCCchhhhchhhHHHHHHHHHH
Q 016901          160 ALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAE  239 (380)
Q Consensus       160 a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E  239 (380)
                      +++++|+||||||...          ..|+.++.+++++|++.+++||||+||.+++.        .+ ..|+.+|..+|
T Consensus        62 ~~~~~d~vi~~a~~~~----------~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~--------~~-~~y~~sK~~~e  122 (286)
T 2zcu_A           62 ALQGVEKLLLISSSEV----------GQRAPQHRNVINAAKAAGVKFIAYTSLLHADT--------SP-LGLADEHIETE  122 (286)
T ss_dssp             HTTTCSEEEECC------------------CHHHHHHHHHHHHTCCEEEEEEETTTTT--------CC-STTHHHHHHHH
T ss_pred             HHhCCCEEEEeCCCCc----------hHHHHHHHHHHHHHHHcCCCEEEEECCCCCCC--------Cc-chhHHHHHHHH
Confidence            9999999999998521          24788999999999999999999999988741        11 36999999999


Q ss_pred             HHHHHCCCCEEEEecCcccCCCcccc----cccceeeccCCcccCCCCCHHHHHHHHHHHHhCCCCccCcEEEEecCCCC
Q 016901          240 EALIASGLPYTIVRPGGMERPTDAYK----ETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTA  315 (380)
Q Consensus       240 ~~l~~~g~~~~ivRpg~v~gp~~~~~----~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~~~~~~~~~ni~~~~~~  315 (380)
                      +++++.|+++++||||.++++.....    ......... ......+++++|+|++++.++.++. ..+++||+++++..
T Consensus       123 ~~~~~~~~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~Dva~~~~~~~~~~~-~~g~~~~i~~~~~~  200 (286)
T 2zcu_A          123 KMLADSGIVYTLLRNGWYSENYLASAPAALEHGVFIGAA-GDGKIASATRADYAAAAARVISEAG-HEGKVYELAGDSAW  200 (286)
T ss_dssp             HHHHHHCSEEEEEEECCBHHHHHTTHHHHHHHTEEEESC-TTCCBCCBCHHHHHHHHHHHHHSSS-CTTCEEEECCSSCB
T ss_pred             HHHHHcCCCeEEEeChHHhhhhHHHhHHhhcCCceeccC-CCCccccccHHHHHHHHHHHhcCCC-CCCceEEEeCCCcC
Confidence            99999999999999998776532110    111222222 2233478999999999999999865 45889999999999


Q ss_pred             CcchHHHHHHhcCCCCC
Q 016901          316 PLTPMEELLAKIPSQRA  332 (380)
Q Consensus       316 s~~~~~e~~~~~~~~~~  332 (380)
                      |..|+++.+.+.+|...
T Consensus       201 s~~e~~~~i~~~~g~~~  217 (286)
T 2zcu_A          201 TLTQLAAELTKQSGKQV  217 (286)
T ss_dssp             CHHHHHHHHHHHHSSCC
T ss_pred             CHHHHHHHHHHHHCCCC
Confidence            99999999999998653

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.97  E-value=1.4e-30  Score=248.92  Aligned_cols=233  Identities=13%  Similarity=0.089  Sum_probs=172.1

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .+++|+|||||||||||++|+++|+++|++|++++|+.......   +..+           ....+++++.+|+.|.. 
T Consensus        24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~-----------~~~~~~~~~~~D~~~~~-   88 (343)
T 2b69_A           24 EKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRN---VEHW-----------IGHENFELINHDVVEPL-   88 (343)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGG---TGGG-----------TTCTTEEEEECCTTSCC-
T ss_pred             ccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhh---hhhh-----------ccCCceEEEeCccCChh-
Confidence            45678999999999999999999999999999999975421110   0000           01157899999998753 


Q ss_pred             HHHHhcCCCEEEEccccCccc--cCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCC-----ch-----hh
Q 016901          157 IEPALGNASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF-----PA-----AI  224 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag~~~~~--~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~-----~~-----~~  224 (380)
                          +.++|+||||||.....  ..++...+++|+.|+.+++++|++.++ +|||+||.+++....     +.     .+
T Consensus        89 ----~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~~~~  163 (343)
T 2b69_A           89 ----YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNP  163 (343)
T ss_dssp             ----CCCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCS
T ss_pred             ----hcCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-cEEEECcHHHhCCCCCCCCcccccccCCC
Confidence                56899999999865321  223344578999999999999999886 999999987642210     11     23


Q ss_pred             hchhhHHHHHHHHHHHHHH----HCCCCEEEEecCcccCCCccccc-------------ccceeeccCCcccCCCCCHHH
Q 016901          225 LNLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKE-------------THNITLSQEDTLFGGQVSNLQ  287 (380)
Q Consensus       225 ~~~~~~Y~~sK~~~E~~l~----~~g~~~~ivRpg~v~gp~~~~~~-------------~~~~~~~~~~~~~~~~i~~~D  287 (380)
                      ..+...|+.+|+.+|.+++    +.|++++++||+++|||+.....             ...+.+.........+++++|
T Consensus       164 ~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D  243 (343)
T 2b69_A          164 IGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSD  243 (343)
T ss_dssp             SSTTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHH
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHH
Confidence            3456789999999999875    36999999999999999642110             111111222223346899999


Q ss_pred             HHHHHHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCCCCC
Q 016901          288 VAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (380)
Q Consensus       288 vA~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~~  332 (380)
                      +|++++.+++.+.   +++||+++++..++.|+++.+.+.+|...
T Consensus       244 va~a~~~~~~~~~---~~~~~i~~~~~~s~~e~~~~i~~~~g~~~  285 (343)
T 2b69_A          244 LVNGLVALMNSNV---SSPVNLGNPEEHTILEFAQLIKNLVGSGS  285 (343)
T ss_dssp             HHHHHHHHHTSSC---CSCEEESCCCEEEHHHHHHHHHHHHTCCC
T ss_pred             HHHHHHHHHhcCC---CCeEEecCCCCCcHHHHHHHHHHHhCCCC
Confidence            9999999997653   67999999999999999999999998654

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.97  E-value=2.6e-30  Score=244.44  Aligned_cols=233  Identities=19%  Similarity=0.201  Sum_probs=163.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-Cchh---HHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVR-SVQR---AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~  155 (380)
                      +|+|||||||||||++++++|+++|++|++++| +++.   ...+.    .+  ..        ...+++++.+|++|.+
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~----~~--~~--------~~~~~~~~~~Dl~d~~   66 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLT----NL--PG--------ASEKLHFFNADLSNPD   66 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHH----TS--TT--------HHHHEEECCCCTTCGG
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHH----hh--hc--------cCCceEEEecCCCCHH
Confidence            468999999999999999999999999999998 6532   11111    00  00        0035788999999999


Q ss_pred             cHHHHhcCCCEEEEccccCccccCCC-CCcchhhHHHHHHHHHHHHHc-CCCEEEEEccCCCCCCCC----c---hh---
Q 016901          156 QIEPALGNASVVICCIGASEKEVFDI-TGPYRIDFQATKNLVDAATIA-KVNHFIMVSSLGTNKFGF----P---AA---  223 (380)
Q Consensus       156 ~~~~a~~~~d~Vi~~Ag~~~~~~~~~-~~~~~~nv~g~~~ll~a~~~~-~v~r~V~~SS~~~~~~~~----~---~~---  223 (380)
                      ++.++++++|+|||||+.......++ ...+++|+.|+.+++++|.+. +++||||+||.++.....    +   ..   
T Consensus        67 ~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~  146 (322)
T 2p4h_X           67 SFAAAIEGCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSD  146 (322)
T ss_dssp             GGHHHHTTCSEEEECCCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCCSEECTTCCCC
T ss_pred             HHHHHHcCCCEEEEcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCCeecCCccccc
Confidence            99999999999999997542222222 236889999999999999988 789999999976422110    0   00   


Q ss_pred             -----hhchh-hHHHHHHHHHHHHHH----HCCCCEEEEecCcccCCCcccccccce--e---eccCCccc----CCCCC
Q 016901          224 -----ILNLF-WGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKETHNI--T---LSQEDTLF----GGQVS  284 (380)
Q Consensus       224 -----~~~~~-~~Y~~sK~~~E~~l~----~~g~~~~ivRpg~v~gp~~~~~~~~~~--~---~~~~~~~~----~~~i~  284 (380)
                           +..+. +.|+.+|+.+|.+++    ++|+++++|||+++|||..........  .   .......+    .+++|
T Consensus       147 ~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~  226 (322)
T 2p4h_X          147 VDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGVTRFHMVH  226 (322)
T ss_dssp             HHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGGCCEEEEEEEE
T ss_pred             hhhhcccCcccccHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCccCcCCCcCEEE
Confidence                 01111 269999999998875    379999999999999996431100000  0   00000001    15899


Q ss_pred             HHHHHHHHHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCC
Q 016901          285 NLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPS  329 (380)
Q Consensus       285 ~~DvA~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~  329 (380)
                      ++|+|++++.+++++. ..+ .|| ++++..++.|+++.+.+...
T Consensus       227 v~Dva~a~~~~~~~~~-~~g-~~~-~~~~~~s~~e~~~~i~~~~~  268 (322)
T 2p4h_X          227 VDDVARAHIYLLENSV-PGG-RYN-CSPFIVPIEEMSQLLSAKYP  268 (322)
T ss_dssp             HHHHHHHHHHHHHSCC-CCE-EEE-CCCEEEEHHHHHHHHHHHCT
T ss_pred             HHHHHHHHHHHhhCcC-CCC-CEE-EcCCCCCHHHHHHHHHHhCC
Confidence            9999999999998755 334 488 66777889999999987754

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.97  E-value=5.9e-31  Score=250.84  Aligned_cols=236  Identities=20%  Similarity=0.201  Sum_probs=165.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ++|+|||||||||||++|+++|+++|++|++++|+.++...... +..+.           ...+++++.+|++|.+++.
T Consensus         8 ~~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~-~~~~~-----------~~~~~~~~~~Dl~d~~~~~   75 (338)
T 2rh8_A            8 GKKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSH-LLELQ-----------ELGDLKIFRADLTDELSFE   75 (338)
T ss_dssp             -CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHH-HHHHG-----------GGSCEEEEECCTTTSSSSH
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHH-HHhcC-----------CCCcEEEEecCCCChHHHH
Confidence            36789999999999999999999999999999998654221110 00110           0146889999999999999


Q ss_pred             HHhcCCCEEEEccccCccccCCC-CCcchhhHHHHHHHHHHHHHcC-CCEEEEEccCCCC------C---CCCchhh---
Q 016901          159 PALGNASVVICCIGASEKEVFDI-TGPYRIDFQATKNLVDAATIAK-VNHFIMVSSLGTN------K---FGFPAAI---  224 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~~~~~~~-~~~~~~nv~g~~~ll~a~~~~~-v~r~V~~SS~~~~------~---~~~~~~~---  224 (380)
                      ++++++|+|||+|+.......++ ...+++|+.|+.+++++|.+.+ ++||||+||.++.      .   ...+..+   
T Consensus        76 ~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~  155 (338)
T 2rh8_A           76 APIAGCDFVFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDI  155 (338)
T ss_dssp             HHHTTCSEEEEESSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC
T ss_pred             HHHcCCCEEEEeCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccch
Confidence            99999999999998653322233 2368999999999999999986 8999999997521      0   0111110   


Q ss_pred             -----hc-hhhHHHHHHHHHHHHHHH----CCCCEEEEecCcccCCCccccccccee-----eccCCccc----------
Q 016901          225 -----LN-LFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKETHNIT-----LSQEDTLF----------  279 (380)
Q Consensus       225 -----~~-~~~~Y~~sK~~~E~~l~~----~g~~~~ivRpg~v~gp~~~~~~~~~~~-----~~~~~~~~----------  279 (380)
                           .. ..+.|+.+|.++|.+++.    +|+++++|||+++|||+........+.     .......+          
T Consensus       156 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  235 (338)
T 2rh8_A          156 EFLTSAKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLS  235 (338)
T ss_dssp             -------CCCCCCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred             hhccccCCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccccccccccccc
Confidence                 01 112599999999988753    699999999999999965321100000     00000000          


Q ss_pred             --CCCCCHHHHHHHHHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCC
Q 016901          280 --GGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPS  329 (380)
Q Consensus       280 --~~~i~~~DvA~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~  329 (380)
                        .+++|++|+|++++.+++++..  ++.|+++++ ..++.|+++.+.+..+
T Consensus       236 ~~~~~i~v~Dva~a~~~~~~~~~~--~~~~~~~~~-~~s~~e~~~~l~~~~~  284 (338)
T 2rh8_A          236 GSVSIAHVEDVCRAHIFVAEKESA--SGRYICCAA-NTSVPELAKFLSKRYP  284 (338)
T ss_dssp             SSEEEEEHHHHHHHHHHHHHCTTC--CEEEEECSE-EECHHHHHHHHHHHCT
T ss_pred             CcccEEEHHHHHHHHHHHHcCCCc--CCcEEEecC-CCCHHHHHHHHHHhCC
Confidence              1589999999999999987553  457877654 5789999999998765

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.97  E-value=4.6e-30  Score=258.47  Aligned_cols=241  Identities=16%  Similarity=0.141  Sum_probs=176.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHH---HHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAE---NLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~  155 (380)
                      .+|+|||||||||||++|+++|+++|++|++++|+..+..   .+.+.++.+......    .....+++++.+|++|++
T Consensus       149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~----~~~~~~v~~v~~Dl~d~~  224 (508)
T 4f6l_B          149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETV----EMMLSNIEVIVGDFECMD  224 (508)
T ss_dssp             CCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHH----HHHSTTEEEEEEBTTBCS
T ss_pred             CCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccc----hhccCceEEEecCCcccc
Confidence            5689999999999999999999999999999999987433   333322222000000    001268999999999988


Q ss_pred             cHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCC---------Cchhh--
Q 016901          156 QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG---------FPAAI--  224 (380)
Q Consensus       156 ~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~---------~~~~~--  224 (380)
                      .+. ++.++|+||||||.... ..++...+++|+.|+.+++++|++ ++++|||+||.++..+.         .+..+  
T Consensus       225 ~l~-~~~~~D~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~-~~~~~v~iSS~~vG~~~~~~~~~~~~~E~~~~~  301 (508)
T 4f6l_B          225 DVV-LPENMDTIIHAGARTDH-FGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISVGTYFDIDTEDVTFSEADVYK  301 (508)
T ss_dssp             SCC-CSSCCSEEEECCCC---------CCHHHHHHHHHHHHHHHHT-TTCEEEEEEESCTTSEECTTCSCCEECTTCSCS
T ss_pred             cCC-CccCCCEEEECCceecC-CCCHHHHhhhHHHHHHHHHHHHHh-CCCcEEEeCChhhccCCccCCcCcccccccccc
Confidence            888 77899999999997642 345667789999999999999998 67899999998871110         00111  


Q ss_pred             -hchhhHHHHHHHHHHHHHHH---CCCCEEEEecCcccCCCcccccccc----------------eeecc-CCcccCCCC
Q 016901          225 -LNLFWGVLLWKRKAEEALIA---SGLPYTIVRPGGMERPTDAYKETHN----------------ITLSQ-EDTLFGGQV  283 (380)
Q Consensus       225 -~~~~~~Y~~sK~~~E~~l~~---~g~~~~ivRpg~v~gp~~~~~~~~~----------------~~~~~-~~~~~~~~i  283 (380)
                       ..+.++|+.+|+.+|+++++   .|++++|+|||+||||.........                ..++. ......+++
T Consensus       302 ~~~~~~~Y~~sK~~~E~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~v  381 (508)
T 4f6l_B          302 GQLLTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMPVDFS  381 (508)
T ss_dssp             SBCCCSHHHHHHHHHHHHHHHHHHTTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEETTGGGSEEECE
T ss_pred             cccCCCcHHHHHHHHHHHHHHHHHcCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCCCccCceEEEE
Confidence             23567899999999999875   8999999999999999643210000                01111 112233689


Q ss_pred             CHHHHHHHHHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcC
Q 016901          284 SNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIP  328 (380)
Q Consensus       284 ~~~DvA~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~  328 (380)
                      +++|+|++++.++.++.  .+++||+++++..++.++++.+.+..
T Consensus       382 ~v~DvA~ai~~~~~~~~--~~~~~nl~~~~~~s~~el~~~i~~~~  424 (508)
T 4f6l_B          382 FVDTTARQIVALAQVNT--PQIIYHVLSPNKMPVKSLLECVKRKE  424 (508)
T ss_dssp             EHHHHHHHHHHHTTBCC--SCSEEEESCSCEEEHHHHHHHHHSSC
T ss_pred             cHHHHHHHHHHHHhCCC--CCCEEEeCCCCCCCHHHHHHHHHHcC
Confidence            99999999999998876  58999999999999999999999875

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.97  E-value=1e-30  Score=246.86  Aligned_cols=225  Identities=16%  Similarity=0.073  Sum_probs=169.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchh----HHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCCh
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR----AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~  154 (380)
                      ++|+|||||||||||++|+++|+++|++|++++|+...    ...+.               ......+++++.+|++  
T Consensus         6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~---------------~~~~~~~~~~~~~Dl~--   68 (321)
T 3vps_A            6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTG---------------KFLEKPVLELEERDLS--   68 (321)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSS---------------EEECSCGGGCCHHHHT--
T ss_pred             CCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhh---------------hhccCCCeeEEeCccc--
Confidence            57899999999999999999999999999999998651    11000               0001134555556654  


Q ss_pred             hcHHHHhcCCCEEEEccccCcc--ccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCC-----Cchhhhch
Q 016901          155 VQIEPALGNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNL  227 (380)
Q Consensus       155 ~~~~~a~~~~d~Vi~~Ag~~~~--~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~-----~~~~~~~~  227 (380)
                              ++|+||||||....  ...++...++ |+.++.+++++|++.++++|||+||.+++...     .+..+..+
T Consensus        69 --------~~d~vi~~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~~~~~~~E~~~~~p  139 (321)
T 3vps_A           69 --------DVRLVYHLASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSVGVPKVVVGSTCEVYGQADTLPTPEDSPLSP  139 (321)
T ss_dssp             --------TEEEEEECCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCC
T ss_pred             --------cCCEEEECCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHcCCCeEEEecCHHHhCCCCCCCCCCCCCCCC
Confidence                    79999999986542  2334455677 99999999999999999999999998774322     12233445


Q ss_pred             hhHHHHHHHHHHHHHHH----CCC-CEEEEecCcccCCCcccc-----------cccceeeccCCcccCCCCCHHHHHHH
Q 016901          228 FWGVLLWKRKAEEALIA----SGL-PYTIVRPGGMERPTDAYK-----------ETHNITLSQEDTLFGGQVSNLQVAEL  291 (380)
Q Consensus       228 ~~~Y~~sK~~~E~~l~~----~g~-~~~ivRpg~v~gp~~~~~-----------~~~~~~~~~~~~~~~~~i~~~DvA~~  291 (380)
                      .+.|+.+|+.+|++++.    .|+ +++++||+++|||+....           ....+.+........+++|++|+|++
T Consensus       140 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~  219 (321)
T 3vps_A          140 RSPYAASKVGLEMVAGAHQRASVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDK  219 (321)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHSSSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHH
T ss_pred             CChhHHHHHHHHHHHHHHHHHcCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHH
Confidence            67899999999999875    689 999999999999975421           01112222233334478999999999


Q ss_pred             HHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCCCCCC
Q 016901          292 LACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE  333 (380)
Q Consensus       292 i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~~~  333 (380)
                      ++.+++++..  + +||+++++..++.|+++.+. .+|....
T Consensus       220 ~~~~~~~~~~--g-~~~i~~~~~~s~~e~~~~i~-~~g~~~~  257 (321)
T 3vps_A          220 LVALANRPLP--S-VVNFGSGQSLSVNDVIRILQ-ATSPAAE  257 (321)
T ss_dssp             HHHGGGSCCC--S-EEEESCSCCEEHHHHHHHHH-TTCTTCE
T ss_pred             HHHHHhcCCC--C-eEEecCCCcccHHHHHHHHH-HhCCCCc
Confidence            9999998773  5 99999999999999999999 8886543

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.97  E-value=3.3e-30  Score=245.71  Aligned_cols=239  Identities=15%  Similarity=0.099  Sum_probs=172.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      |+|||||||||||++++++|+++|++|++++|.........+.+....            ..+++++.+|++|++++.++
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~Dl~~~~~~~~~   68 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLG------------GKHPTFVEGDIRNEALMTEI   68 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHH------------TSCCEEEECCTTCHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhc------------CCcceEEEccCCCHHHHHHH
Confidence            479999999999999999999999999999874322111111111110            04688999999999999998


Q ss_pred             hc--CCCEEEEccccCcc--ccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCC-----chhhhch-hhH
Q 016901          161 LG--NASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF-----PAAILNL-FWG  230 (380)
Q Consensus       161 ~~--~~d~Vi~~Ag~~~~--~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~-----~~~~~~~-~~~  230 (380)
                      ++  ++|+||||||....  ...++...+++|+.|+.+++++|++.++++|||+||.+++....     +..+..+ ...
T Consensus        69 ~~~~~~D~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~~  148 (338)
T 1udb_A           69 LHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDNPKIPYVESFPTGTPQSP  148 (338)
T ss_dssp             HHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSH
T ss_pred             hhccCCCEEEECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHHhCCCCCCCcCcccCCCCCCCh
Confidence            86  59999999986432  11233445789999999999999999999999999987643211     1112212 568


Q ss_pred             HHHHHHHHHHHHHH----C-CCCEEEEecCcccCCCcc--cc----c----------------ccceeecc------CCc
Q 016901          231 VLLWKRKAEEALIA----S-GLPYTIVRPGGMERPTDA--YK----E----------------THNITLSQ------EDT  277 (380)
Q Consensus       231 Y~~sK~~~E~~l~~----~-g~~~~ivRpg~v~gp~~~--~~----~----------------~~~~~~~~------~~~  277 (380)
                      |+.+|+++|.+++.    . +++++++||+++|||...  +.    .                ...+.+..      ...
T Consensus       149 Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~  228 (338)
T 1udb_A          149 YGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGT  228 (338)
T ss_dssp             HHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSS
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCc
Confidence            99999999998864    3 799999999999998421  00    0                00011100      111


Q ss_pred             ccCCCCCHHHHHHHHHHHHhCCC-CccCcEEEEecCCCCCcchHHHHHHhcCCCC
Q 016901          278 LFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (380)
Q Consensus       278 ~~~~~i~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~  331 (380)
                      ...++||++|+|++++.++++.. ...+++||+++++..|+.|+++.+.++.+..
T Consensus       229 ~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~yni~~~~~~s~~e~~~~i~~~~g~~  283 (338)
T 1udb_A          229 GVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKP  283 (338)
T ss_dssp             CEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTSC
T ss_pred             eeeeeEEHHHHHHHHHHHHhhhhccCCCcEEEecCCCceeHHHHHHHHHHHhCCC
Confidence            22368999999999999987632 1234799999999999999999999998864

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.97  E-value=3.8e-30  Score=240.02  Aligned_cols=214  Identities=17%  Similarity=0.195  Sum_probs=169.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~-G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      |+|||||||||||++++++|+++ |++|++++|++++...+.                   ..+++++.+|++|++++.+
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~-------------------~~~v~~~~~D~~d~~~l~~   61 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDW-------------------RGKVSVRQLDYFNQESMVE   61 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGG-------------------BTTBEEEECCTTCHHHHHH
T ss_pred             CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhh-------------------hCCCEEEEcCCCCHHHHHH
Confidence            57999999999999999999998 999999999987643321                   1679999999999999999


Q ss_pred             HhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCCchhhhchhhHHHHHHHHHH
Q 016901          160 ALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAE  239 (380)
Q Consensus       160 a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E  239 (380)
                      +++++|+||||||....        ...|+.++.+++++|++.+++||||+||++..... +   .    .+...+..+|
T Consensus        62 ~~~~~d~vi~~a~~~~~--------~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~~~~~-~---~----~~~~~~~~~e  125 (289)
T 3e48_A           62 AFKGMDTVVFIPSIIHP--------SFKRIPEVENLVYAAKQSGVAHIIFIGYYADQHNN-P---F----HMSPYFGYAS  125 (289)
T ss_dssp             HTTTCSEEEECCCCCCS--------HHHHHHHHHHHHHHHHHTTCCEEEEEEESCCSTTC-C---S----TTHHHHHHHH
T ss_pred             HHhCCCEEEEeCCCCcc--------chhhHHHHHHHHHHHHHcCCCEEEEEcccCCCCCC-C---C----ccchhHHHHH
Confidence            99999999999986432        24589999999999999999999999997653211 1   0    1223344678


Q ss_pred             HHHHHCCCCEEEEecCcccCCCcccc----cccceeeccCCcccCCCCCHHHHHHHHHHHHhCCCCccCcEEEEecCCCC
Q 016901          240 EALIASGLPYTIVRPGGMERPTDAYK----ETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTA  315 (380)
Q Consensus       240 ~~l~~~g~~~~ivRpg~v~gp~~~~~----~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~~~~~~~~~ni~~~~~~  315 (380)
                      +.+++.|+++++||||+++|+...+.    .......+. ......+++++|+|++++.++.++. ..+++||++ ++..
T Consensus       126 ~~~~~~g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~i~~~Dva~~~~~~l~~~~-~~g~~~~~~-~~~~  202 (289)
T 3e48_A          126 RLLSTSGIDYTYVRMAMYMDPLKPYLPELMNMHKLIYPA-GDGRINYITRNDIARGVIAIIKNPD-TWGKRYLLS-GYSY  202 (289)
T ss_dssp             HHHHHHCCEEEEEEECEESTTHHHHHHHHHHHTEECCCC-TTCEEEEECHHHHHHHHHHHHHCGG-GTTCEEEEC-CEEE
T ss_pred             HHHHHcCCCEEEEeccccccccHHHHHHHHHCCCEecCC-CCceeeeEEHHHHHHHHHHHHcCCC-cCCceEEeC-CCcC
Confidence            88888999999999999999853211    111111222 2222358999999999999999876 448899999 9999


Q ss_pred             CcchHHHHHHhcCCCCC
Q 016901          316 PLTPMEELLAKIPSQRA  332 (380)
Q Consensus       316 s~~~~~e~~~~~~~~~~  332 (380)
                      +..|+++.+.+++|...
T Consensus       203 s~~e~~~~~~~~~g~~~  219 (289)
T 3e48_A          203 DMKELAAILSEASGTEI  219 (289)
T ss_dssp             EHHHHHHHHHHHHTSCC
T ss_pred             CHHHHHHHHHHHHCCce
Confidence            99999999999998753

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.97  E-value=1.1e-29  Score=245.21  Aligned_cols=239  Identities=13%  Similarity=0.007  Sum_probs=174.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhH--HHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRA--ENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      ||+|||||||||||++++++|+++|++|++++|+.+..  ..+.......          .....+++++.+|++|.+++
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~Dl~d~~~~   70 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDP----------HTCNPKFHLHYGDLSDTSNL   70 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC-------------------------------CCEEECCCCSSCHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhcc----------ccCCCceEEEECCCCCHHHH
Confidence            46899999999999999999999999999999986542  1111100000          00015789999999999999


Q ss_pred             HHHhcC--CCEEEEccccCccc--cCCCCCcchhhHHHHHHHHHHHHHcCC---CEEEEEccCCCCCCC-----Cchhhh
Q 016901          158 EPALGN--ASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKV---NHFIMVSSLGTNKFG-----FPAAIL  225 (380)
Q Consensus       158 ~~a~~~--~d~Vi~~Ag~~~~~--~~~~~~~~~~nv~g~~~ll~a~~~~~v---~r~V~~SS~~~~~~~-----~~~~~~  225 (380)
                      .+++++  +|+||||||.....  ..++...+++|+.|+.+++++|.+.++   ++|||+||.+++...     .+..+.
T Consensus        71 ~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~~~~E~~~~  150 (372)
T 1db3_A           71 TRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPF  150 (372)
T ss_dssp             HHHHHHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCC
T ss_pred             HHHHHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCCCCCCccCCC
Confidence            999875  79999999965322  122334468999999999999999988   899999998764321     112233


Q ss_pred             chhhHHHHHHHHHHHHHHH----CCCCEEEEecCcccCCCccccc-------------cc--ceeeccCCcccCCCCCHH
Q 016901          226 NLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE-------------TH--NITLSQEDTLFGGQVSNL  286 (380)
Q Consensus       226 ~~~~~Y~~sK~~~E~~l~~----~g~~~~ivRpg~v~gp~~~~~~-------------~~--~~~~~~~~~~~~~~i~~~  286 (380)
                      .+...|+.+|.++|.+++.    .+++++++|++.+|||+.....             .+  ............+++|++
T Consensus       151 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~  230 (372)
T 1db3_A          151 YPRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAK  230 (372)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHH
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeEHH
Confidence            4567899999999998863    5899999999999999642110             00  011112222334689999


Q ss_pred             HHHHHHHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCCCC
Q 016901          287 QVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (380)
Q Consensus       287 DvA~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~  331 (380)
                      |+|++++.+++++.   +++||+++++..++.|+++.+.+.+|..
T Consensus       231 Dva~a~~~~~~~~~---~~~~ni~~~~~~s~~e~~~~i~~~~g~~  272 (372)
T 1db3_A          231 DYVKMQWMMLQQEQ---PEDFVIATGVQYSVRQFVEMAAAQLGIK  272 (372)
T ss_dssp             HHHHHHHHTTSSSS---CCCEEECCCCCEEHHHHHHHHHHTTTEE
T ss_pred             HHHHHHHHHHhcCC---CceEEEcCCCceeHHHHHHHHHHHhCCC
Confidence            99999999998765   5889999999999999999999998864

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.96  E-value=2.7e-30  Score=241.24  Aligned_cols=214  Identities=14%  Similarity=0.141  Sum_probs=170.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ..++|||||||||||++++++|+++|++|++++|+                                  .+|++|.+++.
T Consensus        11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~----------------------------------~~Dl~d~~~~~   56 (292)
T 1vl0_A           11 HHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ----------------------------------DLDITNVLAVN   56 (292)
T ss_dssp             -CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT----------------------------------TCCTTCHHHHH
T ss_pred             ccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc----------------------------------cCCCCCHHHHH
Confidence            34789999999999999999999999999999885                                  16999999999


Q ss_pred             HHhc--CCCEEEEccccCccc--cCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCC-----chhhhchhh
Q 016901          159 PALG--NASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF-----PAAILNLFW  229 (380)
Q Consensus       159 ~a~~--~~d~Vi~~Ag~~~~~--~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~-----~~~~~~~~~  229 (380)
                      ++++  ++|+||||||.....  ..++...+++|+.|+.+++++|++.++ +|||+||.+++....     +..+..+..
T Consensus        57 ~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS~~v~~~~~~~~~~E~~~~~~~~  135 (292)
T 1vl0_A           57 KFFNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGEAKEPITEFDEVNPQS  135 (292)
T ss_dssp             HHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSCCSSCBCTTSCCCCCS
T ss_pred             HHHHhcCCCEEEECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEechHHeECCCCCCCCCCCCCCCCcc
Confidence            9998  899999999965321  234455688999999999999999888 999999987643211     122234566


Q ss_pred             HHHHHHHHHHHHHHHCCCCEEEEecCcccCCCccccc--------ccceeeccCCcccCCCCCHHHHHHHHHHHHhCCCC
Q 016901          230 GVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKE--------THNITLSQEDTLFGGQVSNLQVAELLACMAKNRSL  301 (380)
Q Consensus       230 ~Y~~sK~~~E~~l~~~g~~~~ivRpg~v~gp~~~~~~--------~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~~~  301 (380)
                      .|+.+|+.+|.+++..+.++++|||+++|||+.....        ...+....  .....+++++|+|++++.+++++  
T Consensus       136 ~Y~~sK~~~E~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~--  211 (292)
T 1vl0_A          136 AYGKTKLEGENFVKALNPKYYIVRTAWLYGDGNNFVKTMINLGKTHDELKVVH--DQVGTPTSTVDLARVVLKVIDEK--  211 (292)
T ss_dssp             HHHHHHHHHHHHHHHHCSSEEEEEECSEESSSSCHHHHHHHHHHHCSEEEEES--SCEECCEEHHHHHHHHHHHHHHT--
T ss_pred             HHHHHHHHHHHHHHhhCCCeEEEeeeeeeCCCcChHHHHHHHHhcCCcEEeec--CeeeCCccHHHHHHHHHHHHhcC--
Confidence            8999999999999988889999999999999322110        01111111  23346899999999999999876  


Q ss_pred             ccCcEEEEecCCCCCcchHHHHHHhcCCCCC
Q 016901          302 SYCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (380)
Q Consensus       302 ~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~~  332 (380)
                       .+++||+++++..++.|+++.+.+.++...
T Consensus       212 -~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~  241 (292)
T 1vl0_A          212 -NYGTFHCTCKGICSWYDFAVEIFRLTGIDV  241 (292)
T ss_dssp             -CCEEEECCCBSCEEHHHHHHHHHHHHCCCC
T ss_pred             -CCcEEEecCCCCccHHHHHHHHHHHhCCCC
Confidence             388999999999999999999999998653

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.96  E-value=9.1e-30  Score=238.72  Aligned_cols=224  Identities=20%  Similarity=0.160  Sum_probs=172.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      +|+|+||||||+||++++++|+++| ++|++++|++++...  ..+..               .+++++.+|++|++++.
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~--~~l~~---------------~~~~~~~~D~~d~~~l~   67 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELRL---------------QGAEVVQGDQDDQVIME   67 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH--HHHHH---------------TTCEEEECCTTCHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH--HHHHH---------------CCCEEEEecCCCHHHHH
Confidence            5789999999999999999999999 999999999765421  11111               56899999999999999


Q ss_pred             HHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCCchhhhchhhHHHHHHHHH
Q 016901          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKA  238 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~~Y~~sK~~~  238 (380)
                      ++++++|+||||++.....      ..+.|+.++.+++++|++.+++||||+|+.+++...  .  ..+...|+.+|..+
T Consensus        68 ~~~~~~d~vi~~a~~~~~~------~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~~~~~~--~--~~~~~~y~~sK~~~  137 (299)
T 2wm3_A           68 LALNGAYATFIVTNYWESC------SQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLT--A--GRLAAAHFDGKGEV  137 (299)
T ss_dssp             HHHTTCSEEEECCCHHHHT------CHHHHHHHHHHHHHHHHHHTCSEEEECCCCCHHHHT--T--TSCCCHHHHHHHHH
T ss_pred             HHHhcCCEEEEeCCCCccc------cchHHHHHHHHHHHHHHHcCCCEEEEEcCccccccC--C--CcccCchhhHHHHH
Confidence            9999999999999853211      246789999999999999999999998876653210  0  01234699999999


Q ss_pred             HHHHHHCCCCEEEEecCcccCCCccc-c----ccc---ceeeccCCcccCCCCCHHHHHHHHHHHHhCCCCccCcEEEEe
Q 016901          239 EEALIASGLPYTIVRPGGMERPTDAY-K----ETH---NITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVI  310 (380)
Q Consensus       239 E~~l~~~g~~~~ivRpg~v~gp~~~~-~----~~~---~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~~~~~~~~~ni~  310 (380)
                      |+++++.|+++++||||++||+.... .    ..+   .+.++. ......+++++|+|++++.++.++....+++|++.
T Consensus       138 e~~~~~~gi~~~ilrp~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~i~~~Dva~~~~~~l~~~~~~~g~~~~~~  216 (299)
T 2wm3_A          138 EEYFRDIGVPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLPT-GDVPMDGMSVSDLGPVVLSLLKMPEKYVGQNIGLS  216 (299)
T ss_dssp             HHHHHHHTCCEEEEECCEEGGGGGTTTCCEECTTSSSEEECCCC-TTSCEEEECGGGHHHHHHHHHHSHHHHTTCEEECC
T ss_pred             HHHHHHCCCCEEEEeecHHhhhchhhcCCcccCCCCEEEEEecC-CCCccceecHHHHHHHHHHHHcChhhhCCeEEEee
Confidence            99999999999999999999974321 0    011   111111 12223579999999999999987532347899998


Q ss_pred             cCCCCCcchHHHHHHhcCCCCC
Q 016901          311 AETTAPLTPMEELLAKIPSQRA  332 (380)
Q Consensus       311 ~~~~~s~~~~~e~~~~~~~~~~  332 (380)
                      + +..|..|+++.+.+++|...
T Consensus       217 g-~~~s~~e~~~~~~~~~g~~~  237 (299)
T 2wm3_A          217 T-CRHTAEEYAALLTKHTRKVV  237 (299)
T ss_dssp             S-EEECHHHHHHHHHHHHSSCE
T ss_pred             e-ccCCHHHHHHHHHHHHCCCc
Confidence            7 56899999999999998753

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.96  E-value=2.5e-30  Score=242.24  Aligned_cols=217  Identities=12%  Similarity=0.012  Sum_probs=171.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      |+|||||||||||++++++|+ +|++|++++|+..                              ++.+|++|.+++.++
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~------------------------------~~~~D~~d~~~~~~~   49 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK------------------------------EFCGDFSNPKGVAET   49 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS------------------------------SSCCCTTCHHHHHHH
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc------------------------------cccccCCCHHHHHHH
Confidence            479999999999999999999 8999999999751                              246899999999999


Q ss_pred             hcC--CCEEEEccccCccc--cCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCC-----CchhhhchhhHH
Q 016901          161 LGN--ASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNLFWGV  231 (380)
Q Consensus       161 ~~~--~d~Vi~~Ag~~~~~--~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~-----~~~~~~~~~~~Y  231 (380)
                      +++  +|+||||||.....  ..++...+++|+.++.+++++|++.++ ||||+||.+++...     .+..+..+.+.|
T Consensus        50 ~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y  128 (299)
T 1n2s_A           50 VRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIPWQETDATSPLNVY  128 (299)
T ss_dssp             HHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTCCBCTTSCCCCSSHH
T ss_pred             HHhcCCCEEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEecccEEeCCCCCCCCCCCCCCCccHH
Confidence            986  99999999865421  234445688999999999999999887 89999998774322     112233456789


Q ss_pred             HHHHHHHHHHHHHCCCCEEEEecCcccCCCccc-c--------cccceeeccCCcccCCCCCHHHHHHHHHHHHhCCC-C
Q 016901          232 LLWKRKAEEALIASGLPYTIVRPGGMERPTDAY-K--------ETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRS-L  301 (380)
Q Consensus       232 ~~sK~~~E~~l~~~g~~~~ivRpg~v~gp~~~~-~--------~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~~-~  301 (380)
                      +.+|+.+|+++++...+++++||+++|||+... .        ....+....  .....++|++|+|++++.+++++. .
T Consensus       129 ~~sK~~~E~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~~~~  206 (299)
T 1n2s_A          129 GKTKLAGEKALQDNCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIN--DQYGAPTGAELLADCTAHAIRVALNK  206 (299)
T ss_dssp             HHHHHHHHHHHHHHCSSEEEEEECSEECSSSCCHHHHHHHHHHHCSEEEEEC--SCEECCEEHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHhCCCeEEEeeeeecCCCcCcHHHHHHHHHhcCCCEEeec--CcccCCeeHHHHHHHHHHHHHHhccc
Confidence            999999999999877799999999999996531 0        011111111  133478999999999999998752 1


Q ss_pred             c-cCcEEEEecCCCCCcchHHHHHHhcCCCC
Q 016901          302 S-YCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (380)
Q Consensus       302 ~-~~~~~ni~~~~~~s~~~~~e~~~~~~~~~  331 (380)
                      . .+++||+++++..|+.|+++.+.+.+|..
T Consensus       207 ~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~  237 (299)
T 1n2s_A          207 PEVAGLYHLVAGGTTTWHDYAALVFDEARKA  237 (299)
T ss_dssp             GGGCEEEECCCBSCEEHHHHHHHHHHHHHHH
T ss_pred             cccCceEEEeCCCCCCHHHHHHHHHHHhCCC
Confidence            2 47899999999999999999999998764

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.96  E-value=5e-30  Score=248.61  Aligned_cols=235  Identities=12%  Similarity=-0.009  Sum_probs=176.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchh-----HHHHHHHHHhhhhcccccccCCCCCC-ceEEEEcCCCCh
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR-----AENLVQSVKQMKLDGELANKGIQPVE-MLELVECDLEKR  154 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~Dl~d~  154 (380)
                      |+|||||||||||++|+++|+++|++|++++|+.++     ...+.....             .... +++++.+|++|.
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~Dl~d~   95 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPH-------------NVNKALMKLHYADLTDA   95 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC---------------------CCEEEEECCTTCH
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccc-------------cccccceEEEECCCCCH
Confidence            689999999999999999999999999999998653     111100000             0012 789999999999


Q ss_pred             hcHHHHhcC--CCEEEEccccCccc--cCCCCCcchhhHHHHHHHHHHHHHcCCC-----EEEEEccCCCCCCC----Cc
Q 016901          155 VQIEPALGN--ASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVN-----HFIMVSSLGTNKFG----FP  221 (380)
Q Consensus       155 ~~~~~a~~~--~d~Vi~~Ag~~~~~--~~~~~~~~~~nv~g~~~ll~a~~~~~v~-----r~V~~SS~~~~~~~----~~  221 (380)
                      +++.+++++  +|+||||||.....  ..++...+++|+.|+.+++++|.+.+++     +|||+||.+++...    .+
T Consensus        96 ~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~E  175 (381)
T 1n7h_A           96 SSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSE  175 (381)
T ss_dssp             HHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCT
T ss_pred             HHHHHHHHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCCCC
Confidence            999999875  79999999965422  2234456789999999999999987765     99999998774321    12


Q ss_pred             hhhhchhhHHHHHHHHHHHHHHH----CCCCEEEEecCcccCCCccccc-------------cc--ceeeccCCcccCCC
Q 016901          222 AAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE-------------TH--NITLSQEDTLFGGQ  282 (380)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~~----~g~~~~ivRpg~v~gp~~~~~~-------------~~--~~~~~~~~~~~~~~  282 (380)
                      ..+..+...|+.+|+.+|.+++.    .+++++++|++++|||+.....             ..  .............+
T Consensus       176 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~  255 (381)
T 1n7h_A          176 TTPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDW  255 (381)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEEC
T ss_pred             CCCCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeee
Confidence            22334567899999999998864    5899999999999999642110             00  01111112233468


Q ss_pred             CCHHHHHHHHHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCCCC
Q 016901          283 VSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (380)
Q Consensus       283 i~~~DvA~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~  331 (380)
                      ++++|+|++++.+++++.   +++||+++++..++.|+++.+.+.++..
T Consensus       256 v~v~Dva~a~~~~~~~~~---~~~~~i~~~~~~s~~e~~~~i~~~~g~~  301 (381)
T 1n7h_A          256 GFAGDYVEAMWLMLQQEK---PDDYVVATEEGHTVEEFLDVSFGYLGLN  301 (381)
T ss_dssp             EEHHHHHHHHHHHHTSSS---CCEEEECCSCEEEHHHHHHHHHHHTTCC
T ss_pred             EEHHHHHHHHHHHHhCCC---CCeEEeeCCCCCcHHHHHHHHHHHcCCC
Confidence            999999999999998765   5899999999999999999999998864

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.96  E-value=2.9e-30  Score=230.00  Aligned_cols=198  Identities=21%  Similarity=0.199  Sum_probs=159.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~--~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ++|+|+||||||+||++++++|+++|+  +|++++|++.+  .                     ..+++++.+|++|.++
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~--~---------------------~~~~~~~~~D~~~~~~   60 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA--E---------------------HPRLDNPVGPLAELLP   60 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC--C---------------------CTTEECCBSCHHHHGG
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc--c---------------------CCCceEEeccccCHHH
Confidence            457999999999999999999999998  99999998754  0                     1578899999999999


Q ss_pred             HHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCCchhhhchhhHHHHHHH
Q 016901          157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKR  236 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~~Y~~sK~  236 (380)
                      +.+++  +|+||||||.......++...+++|+.++.++++++++.++++|||+||.+++..        +...|+.+|.
T Consensus        61 ~~~~~--~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~--------~~~~y~~sK~  130 (215)
T 2a35_A           61 QLDGS--IDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAK--------SSIFYNRVKG  130 (215)
T ss_dssp             GCCSC--CSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT--------CSSHHHHHHH
T ss_pred             HHHhh--hcEEEECeeeccccCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCCC--------CccHHHHHHH
Confidence            98888  9999999997643334455567899999999999999999999999999887431        2346999999


Q ss_pred             HHHHHHHHCCCC-EEEEecCcccCCCccccccccee---eccCCcccCCCCCHHHHHHHHHHHHhCCCCccCcEEEEecC
Q 016901          237 KAEEALIASGLP-YTIVRPGGMERPTDAYKETHNIT---LSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAE  312 (380)
Q Consensus       237 ~~E~~l~~~g~~-~~ivRpg~v~gp~~~~~~~~~~~---~~~~~~~~~~~i~~~DvA~~i~~~l~~~~~~~~~~~ni~~~  312 (380)
                      .+|+++++.|++ +++||||++|||.........+.   ...... ..++++++|+|++++.+++++.   +++||++++
T Consensus       131 ~~e~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~Dva~~~~~~~~~~~---~~~~~i~~~  206 (215)
T 2a35_A          131 ELEQALQEQGWPQLTIARPSLLFGPREEFRLAEILAAPIARILPG-KYHGIEACDLARALWRLALEEG---KGVRFVESD  206 (215)
T ss_dssp             HHHHHHTTSCCSEEEEEECCSEESTTSCEEGGGGTTCCCC----C-HHHHHHHHHHHHHHHHHHTCCC---SEEEEEEHH
T ss_pred             HHHHHHHHcCCCeEEEEeCceeeCCCCcchHHHHHHHhhhhccCC-CcCcEeHHHHHHHHHHHHhcCC---CCceEEcHH
Confidence            999999999999 99999999999965311100000   000010 2257999999999999998875   789999986


Q ss_pred             C
Q 016901          313 T  313 (380)
Q Consensus       313 ~  313 (380)
                      +
T Consensus       207 ~  207 (215)
T 2a35_A          207 E  207 (215)
T ss_dssp             H
T ss_pred             H
Confidence            5

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.96  E-value=9e-30  Score=235.00  Aligned_cols=214  Identities=18%  Similarity=0.056  Sum_probs=169.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      +|+|||||||||||++++++|+++|++|++++|++.+..                      ..+++++.+|++|.+++.+
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----------------------~~~~~~~~~Dl~d~~~~~~   59 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA----------------------EAHEEIVACDLADAQAVHD   59 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC----------------------CTTEEECCCCTTCHHHHHH
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc----------------------CCCccEEEccCCCHHHHHH
Confidence            468999999999999999999999999999999865310                      0457899999999999999


Q ss_pred             HhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCC------CchhhhchhhHHHH
Q 016901          160 ALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG------FPAAILNLFWGVLL  233 (380)
Q Consensus       160 a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~------~~~~~~~~~~~Y~~  233 (380)
                      +++++|+||||||...  ..++...+++|+.++.++++++++.+++||||+||.+++...      .+..+..+...|+.
T Consensus        60 ~~~~~d~vi~~a~~~~--~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~~Y~~  137 (267)
T 3ay3_A           60 LVKDCDGIIHLGGVSV--ERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLYGL  137 (267)
T ss_dssp             HHTTCSEEEECCSCCS--CCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCSHHHH
T ss_pred             HHcCCCEEEECCcCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCChHHH
Confidence            9999999999998652  223344578999999999999999999999999998764321      11223345568999


Q ss_pred             HHHHHHHHHH----HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHHHHhCCCCccCcEEEE
Q 016901          234 WKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEV  309 (380)
Q Consensus       234 sK~~~E~~l~----~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~~~~~~~~~ni  309 (380)
                      +|+.+|.+++    +.|+++++||||++|+...            .......+++++|+|++++.+++++. ...++|++
T Consensus       138 sK~~~e~~~~~~~~~~gi~~~~lrp~~v~~~~~------------~~~~~~~~~~~~dva~~~~~~~~~~~-~~~~~~~~  204 (267)
T 3ay3_A          138 SKCFGEDLASLYYHKFDIETLNIRIGSCFPKPK------------DARMMATWLSVDDFMRLMKRAFVAPK-LGCTVVYG  204 (267)
T ss_dssp             HHHHHHHHHHHHHHTTCCCEEEEEECBCSSSCC------------SHHHHHHBCCHHHHHHHHHHHHHSSC-CCEEEEEE
T ss_pred             HHHHHHHHHHHHHHHcCCCEEEEeceeecCCCC------------CCCeeeccccHHHHHHHHHHHHhCCC-CCceeEec
Confidence            9999998876    3699999999999984210            11123368999999999999999875 34678999


Q ss_pred             ecCCCCCcchHHHHHHhcCCCCC
Q 016901          310 IAETTAPLTPMEELLAKIPSQRA  332 (380)
Q Consensus       310 ~~~~~~s~~~~~e~~~~~~~~~~  332 (380)
                      .++...+..++.++  +.+|..+
T Consensus       205 ~~~~~~~~~d~~~~--~~lg~~p  225 (267)
T 3ay3_A          205 ASANTESWWDNDKS--AFLGWVP  225 (267)
T ss_dssp             CCSCSSCCBCCGGG--GGGCCCC
T ss_pred             CCCccccccCHHHH--HHcCCCC
Confidence            98888888888777  5566543

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.96  E-value=4.8e-29  Score=234.97  Aligned_cols=224  Identities=18%  Similarity=0.213  Sum_probs=168.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCch-----hHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCCh
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ-----RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~  154 (380)
                      +|+|+|||||||||++++++|+++|++|++++|+.+     +...+. .+.               ..+++++.+|++|+
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~-~~~---------------~~~~~~~~~D~~d~   67 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLL-YFK---------------QLGAKLIEASLDDH   67 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHH-HHH---------------TTTCEEECCCSSCH
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHH-HHH---------------hCCeEEEeCCCCCH
Confidence            578999999999999999999999999999999853     222221 111               15789999999999


Q ss_pred             hcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcC-CCEEEEEccCCCCCCCCchhhhch-hhHHH
Q 016901          155 VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK-VNHFIMVSSLGTNKFGFPAAILNL-FWGVL  232 (380)
Q Consensus       155 ~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~-v~r~V~~SS~~~~~~~~~~~~~~~-~~~Y~  232 (380)
                      +++.++++++|+|||+++....         ..|+.++.+++++|++.| ++|||+ |+++...... .....+ ...| 
T Consensus        68 ~~l~~~~~~~d~vi~~a~~~~~---------~~~~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~~-~~~~~p~~~~y-  135 (313)
T 1qyd_A           68 QRLVDALKQVDVVISALAGGVL---------SHHILEQLKLVEAIKEAGNIKRFLP-SEFGMDPDIM-EHALQPGSITF-  135 (313)
T ss_dssp             HHHHHHHTTCSEEEECCCCSSS---------STTTTTHHHHHHHHHHSCCCSEEEC-SCCSSCTTSC-CCCCSSTTHHH-
T ss_pred             HHHHHHHhCCCEEEECCccccc---------hhhHHHHHHHHHHHHhcCCCceEEe-cCCcCCcccc-ccCCCCCcchH-
Confidence            9999999999999999986432         236778999999999999 999996 6665422110 111112 3457 


Q ss_pred             HHHHHHHHHHHHCCCCEEEEecCcccCCCcccc---------cccceeeccCCcccCCCCCHHHHHHHHHHHHhCCCCcc
Q 016901          233 LWKRKAEEALIASGLPYTIVRPGGMERPTDAYK---------ETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSY  303 (380)
Q Consensus       233 ~sK~~~E~~l~~~g~~~~ivRpg~v~gp~~~~~---------~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~~~~~  303 (380)
                      .+|..+|+++++.|+++++||||+++++.....         ....+.+.........+++++|+|++++.++.++. ..
T Consensus       136 ~sK~~~e~~~~~~g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~-~~  214 (313)
T 1qyd_A          136 IDKRKVRRAIEAASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQ-TL  214 (313)
T ss_dssp             HHHHHHHHHHHHTTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGG-GS
T ss_pred             HHHHHHHHHHHhcCCCeEEEEeceeccccccccccccccccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHhCcc-cC
Confidence            999999999999999999999999887421100         01111111122223357999999999999998875 45


Q ss_pred             CcEEEEecC-CCCCcchHHHHHHhcCCCCC
Q 016901          304 CKVVEVIAE-TTAPLTPMEELLAKIPSQRA  332 (380)
Q Consensus       304 ~~~~ni~~~-~~~s~~~~~e~~~~~~~~~~  332 (380)
                      ++.|++.++ +..|..|+++.+.++.|...
T Consensus       215 ~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~  244 (313)
T 1qyd_A          215 NKTMYIRPPMNILSQKEVIQIWERLSEQNL  244 (313)
T ss_dssp             SSEEECCCGGGEEEHHHHHHHHHHHHTCCC
T ss_pred             CceEEEeCCCCccCHHHHHHHHHHhcCCCC
Confidence            788888765 67899999999999998754

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.96  E-value=1.6e-29  Score=238.67  Aligned_cols=223  Identities=15%  Similarity=0.089  Sum_probs=171.3

Q ss_pred             eEEEEcCCChHHHHHHHHHHHC--CCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           82 LAFVAGATGKVGSRTVRELLKL--GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        82 ~vlVtGatG~iG~~lv~~Ll~~--G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      +|||||||||||++++++|+++  |++|++++|+....                        .+++++.+|++|.+++.+
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~------------------------~~~~~~~~D~~d~~~~~~   56 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDT------------------------GGIKFITLDVSNRDEIDR   56 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCC------------------------TTCCEEECCTTCHHHHHH
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccc------------------------cCceEEEecCCCHHHHHH
Confidence            4899999999999999999999  89999999875421                        246789999999999999


Q ss_pred             Hhc--CCCEEEEccccCccc-cCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCC------chhhhchhhH
Q 016901          160 ALG--NASVVICCIGASEKE-VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF------PAAILNLFWG  230 (380)
Q Consensus       160 a~~--~~d~Vi~~Ag~~~~~-~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~------~~~~~~~~~~  230 (380)
                      +++  ++|+||||||..... ..++...+++|+.|+.+++++|++.++++|||+||.+++....      +..+..+.+.
T Consensus        57 ~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~~~  136 (317)
T 3ajr_A           57 AVEKYSIDAIFHLAGILSAKGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETPKNKVPSITITRPRTM  136 (317)
T ss_dssp             HHHHTTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCCSH
T ss_pred             HHhhcCCcEEEECCcccCCccccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCCCCCCccccccCCCCch
Confidence            997  899999999865321 1234456789999999999999999999999999987754321      1122345678


Q ss_pred             HHHHHHHHHHHHH----HCCCCEEEEecCcccCCCcccc---------------cccceeeccCCcccCCCCCHHHHHHH
Q 016901          231 VLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYK---------------ETHNITLSQEDTLFGGQVSNLQVAEL  291 (380)
Q Consensus       231 Y~~sK~~~E~~l~----~~g~~~~ivRpg~v~gp~~~~~---------------~~~~~~~~~~~~~~~~~i~~~DvA~~  291 (380)
                      |+.+|..+|.+++    ++|+++++|||+++||+.....               ...............+++|++|+|++
T Consensus       137 Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a  216 (317)
T 3ajr_A          137 FGVTKIAAELLGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKA  216 (317)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHH
Confidence            9999999998876    3699999999999999642110               01111111122223467999999999


Q ss_pred             HHHHHhCCCCc--cCcEEEEecCCCCCcchHHHHHHhcCC
Q 016901          292 LACMAKNRSLS--YCKVVEVIAETTAPLTPMEELLAKIPS  329 (380)
Q Consensus       292 i~~~l~~~~~~--~~~~~ni~~~~~~s~~~~~e~~~~~~~  329 (380)
                      ++.+++++...  .+++||+++ ...+..|+++.+.+.++
T Consensus       217 ~~~~l~~~~~~~~~g~~~~i~~-~~~s~~e~~~~i~~~~~  255 (317)
T 3ajr_A          217 LVDLYEADRDKLVLRNGYNVTA-YTFTPSELYSKIKERIP  255 (317)
T ss_dssp             HHHHHHCCGGGCSSCSCEECCS-EEECHHHHHHHHHTTCC
T ss_pred             HHHHHhCCccccccCceEecCC-ccccHHHHHHHHHHHCC
Confidence            99999876422  358999987 46789999999999887

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.96  E-value=5.9e-28  Score=216.57  Aligned_cols=200  Identities=19%  Similarity=0.141  Sum_probs=156.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHH-HCCCeEEEEeCCch-hHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           79 DDNLAFVAGATGKVGSRTVRELL-KLGFRVRAGVRSVQ-RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll-~~G~~V~~l~R~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ++++|+||||+|+||++++++|+ ++|++|++++|+++ +.+.+..                 ...+++++.+|++|.++
T Consensus         4 mmk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~-----------------~~~~~~~~~~D~~d~~~   66 (221)
T 3r6d_A            4 MYXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEII-----------------DHERVTVIEGSFQNPGX   66 (221)
T ss_dssp             SCSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHH-----------------TSTTEEEEECCTTCHHH
T ss_pred             eEEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhcc-----------------CCCceEEEECCCCCHHH
Confidence            34679999999999999999999 89999999999987 6544321                 01679999999999999


Q ss_pred             HHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCCchh---hhchhh-HHH
Q 016901          157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAA---ILNLFW-GVL  232 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~~~---~~~~~~-~Y~  232 (380)
                      +.++++++|+||||||..             |+. ++++++++++.+++|||++||.+++.......   ...... .|+
T Consensus        67 ~~~~~~~~d~vv~~ag~~-------------n~~-~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~~~~~~~~~~~~y~  132 (221)
T 3r6d_A           67 LEQAVTNAEVVFVGAMES-------------GSD-MASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFDNLPISYV  132 (221)
T ss_dssp             HHHHHTTCSEEEESCCCC-------------HHH-HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHHHHHHHHTSCHHHH
T ss_pred             HHHHHcCCCEEEEcCCCC-------------Chh-HHHHHHHHHhcCCCeEEEEeeceecCCCCcccccccccccccHHH
Confidence            999999999999999853             555 99999999999999999999988754221110   011112 799


Q ss_pred             HHHHHHHHHHHHCCCCEEEEecCcccCCCcccccccceeecc-CCcccCCCCCHHHHHHHHHHHH--hCCCCccCcEEEE
Q 016901          233 LWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQ-EDTLFGGQVSNLQVAELLACMA--KNRSLSYCKVVEV  309 (380)
Q Consensus       233 ~sK~~~E~~l~~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~-~~~~~~~~i~~~DvA~~i~~~l--~~~~~~~~~~~ni  309 (380)
                      .+|..+|.++++.|+++++||||+++++...    ..+.... .....+.+++++|+|++++.++  .++....++.+.+
T Consensus       133 ~~K~~~e~~~~~~~i~~~~vrpg~v~~~~~~----~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~~~~~~~i  208 (221)
T 3r6d_A          133 QGERQARNVLRESNLNYTILRLTWLYNDPEX----TDYELIPEGAQFNDAQVSREAVVKAIFDILHAADETPFHRTSIGV  208 (221)
T ss_dssp             HHHHHHHHHHHHSCSEEEEEEECEEECCTTC----CCCEEECTTSCCCCCEEEHHHHHHHHHHHHTCSCCGGGTTEEEEE
T ss_pred             HHHHHHHHHHHhCCCCEEEEechhhcCCCCC----cceeeccCCccCCCceeeHHHHHHHHHHHHHhcChhhhhcceeee
Confidence            9999999999999999999999999987321    1111211 1222234799999999999999  8776456788888


Q ss_pred             ecCC
Q 016901          310 IAET  313 (380)
Q Consensus       310 ~~~~  313 (380)
                      .++.
T Consensus       209 ~~~~  212 (221)
T 3r6d_A          209 GEPG  212 (221)
T ss_dssp             ECTT
T ss_pred             cCCC
Confidence            8765

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.96  E-value=2.7e-29  Score=239.72  Aligned_cols=234  Identities=16%  Similarity=0.081  Sum_probs=175.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCC-------CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcC
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLG-------FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECD  150 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G-------~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  150 (380)
                      +++|+||||||+||||++++++|+++|       ++|++++|+......                   ....+++++.+|
T Consensus        12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~-------------------~~~~~~~~~~~D   72 (342)
T 2hrz_A           12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA-------------------GFSGAVDARAAD   72 (342)
T ss_dssp             CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT-------------------TCCSEEEEEECC
T ss_pred             ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc-------------------ccCCceeEEEcC
Confidence            467899999999999999999999999       899999998643211                   012578999999


Q ss_pred             CCChhcHHHHh-cCCCEEEEccccCcc-ccCCCCCcchhhHHHHHHHHHHHHHcC-----CCEEEEEccCCCCCCC----
Q 016901          151 LEKRVQIEPAL-GNASVVICCIGASEK-EVFDITGPYRIDFQATKNLVDAATIAK-----VNHFIMVSSLGTNKFG----  219 (380)
Q Consensus       151 l~d~~~~~~a~-~~~d~Vi~~Ag~~~~-~~~~~~~~~~~nv~g~~~ll~a~~~~~-----v~r~V~~SS~~~~~~~----  219 (380)
                      ++|.+++.+++ .++|+||||||.... ...++...+++|+.|+.+++++|++.+     +++|||+||.+++...    
T Consensus        73 l~d~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~  152 (342)
T 2hrz_A           73 LSAPGEAEKLVEARPDVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYP  152 (342)
T ss_dssp             TTSTTHHHHHHHTCCSEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSS
T ss_pred             CCCHHHHHHHHhcCCCEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCC
Confidence            99999999999 589999999996532 122344557899999999999998876     8899999998774322    


Q ss_pred             -CchhhhchhhHHHHHHHHHHHHHHH----CCCCEEEEecCcccC-CCcccccc--------------cceeeccCCccc
Q 016901          220 -FPAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMER-PTDAYKET--------------HNITLSQEDTLF  279 (380)
Q Consensus       220 -~~~~~~~~~~~Y~~sK~~~E~~l~~----~g~~~~ivRpg~v~g-p~~~~~~~--------------~~~~~~~~~~~~  279 (380)
                       .++.+..+...|+.+|.++|.++++    .+++++++|+..+|| |+......              ....+.......
T Consensus       153 ~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (342)
T 2hrz_A          153 IPDEFHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIR  232 (342)
T ss_dssp             BCTTCCCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCE
T ss_pred             cCCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccc
Confidence             1122233567899999999998864    478999999999998 75421100              001111111122


Q ss_pred             CCCCCHHHHHHHHHHHHhCCCC--ccCcEEEEecCCCCCcchHHHHHHhcCCCC
Q 016901          280 GGQVSNLQVAELLACMAKNRSL--SYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (380)
Q Consensus       280 ~~~i~~~DvA~~i~~~l~~~~~--~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~  331 (380)
                      ..++|++|+|++++.+++.+..  ..+++||++ +...++.|+++.+.+.++..
T Consensus       233 ~~~~~v~Dva~~~~~~~~~~~~~~~~~~~~ni~-g~~~s~~e~~~~i~~~~g~~  285 (342)
T 2hrz_A          233 HWHASPRSAVGFLIHGAMIDVEKVGPRRNLSMP-GLSATVGEQIEALRKVAGEK  285 (342)
T ss_dssp             EEEECHHHHHHHHHHHHHSCHHHHCSCCEEECC-CEEEEHHHHHHHHHHHHCHH
T ss_pred             eeeEehHHHHHHHHHHHhccccccCCccEEEcC-CCCCCHHHHHHHHHHHcCcc
Confidence            2368999999999999987641  147899995 46688999999999988764

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.96  E-value=1.1e-28  Score=257.53  Aligned_cols=243  Identities=15%  Similarity=0.112  Sum_probs=178.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++|+||||||+||||++|+++|+++|++|++++|+..........+..+.            ..+++++.+|++|.+++
T Consensus         9 ~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~------------~~~v~~v~~Dl~d~~~l   76 (699)
T 1z45_A            9 STSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLT------------KHHIPFYEVDLCDRKGL   76 (699)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHH------------TSCCCEEECCTTCHHHH
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhcc------------CCceEEEEcCCCCHHHH
Confidence            356899999999999999999999999999999997643222111111110            15688999999999999


Q ss_pred             HHHhc--CCCEEEEccccCccc--cCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCC---------Cchhh
Q 016901          158 EPALG--NASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG---------FPAAI  224 (380)
Q Consensus       158 ~~a~~--~~d~Vi~~Ag~~~~~--~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~---------~~~~~  224 (380)
                      .++++  ++|+||||||.....  ..+....+++|+.++.+++++|++.++++|||+||.+++...         .+..+
T Consensus        77 ~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~  156 (699)
T 1z45_A           77 EKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECP  156 (699)
T ss_dssp             HHHHHHSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSC
T ss_pred             HHHHHhCCCCEEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhCCCccccccCCccccCC
Confidence            99998  899999999865321  112334578999999999999999999999999998774321         11122


Q ss_pred             hchhhHHHHHHHHHHHHHHH------CCCCEEEEecCcccCCCccc--cc------c--------------cceeecc--
Q 016901          225 LNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAY--KE------T--------------HNITLSQ--  274 (380)
Q Consensus       225 ~~~~~~Y~~sK~~~E~~l~~------~g~~~~ivRpg~v~gp~~~~--~~------~--------------~~~~~~~--  274 (380)
                      ..+...|+.+|+++|++++.      .|++++++||+++|||+...  ..      .              ..+.+..  
T Consensus       157 ~~p~~~Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  236 (699)
T 1z45_A          157 LGPTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDD  236 (699)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC---
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCc
Confidence            33556899999999998864      68999999999999975210  00      0              0011110  


Q ss_pred             ----CCcccCCCCCHHHHHHHHHHHHhCC-----CCccCcEEEEecCCCCCcchHHHHHHhcCCCCC
Q 016901          275 ----EDTLFGGQVSNLQVAELLACMAKNR-----SLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (380)
Q Consensus       275 ----~~~~~~~~i~~~DvA~~i~~~l~~~-----~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~~  332 (380)
                          ......++||++|+|++++.+++..     ....+++||+++++..++.|+++.+.++.+...
T Consensus       237 ~~~~~g~~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~  303 (699)
T 1z45_A          237 YDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDL  303 (699)
T ss_dssp             ---CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCC
T ss_pred             ccCCCCCeeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCCCcHHHHHHHHHHHhCCCC
Confidence                1122236799999999999998742     112367999999999999999999999988653

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.96  E-value=1.9e-29  Score=229.14  Aligned_cols=203  Identities=19%  Similarity=0.226  Sum_probs=156.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~--~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ++|+|+||||+|+||++++++|+++|+  +|++++|++++.....                   ..++.++.+|++|.++
T Consensus        17 ~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~-------------------~~~~~~~~~D~~d~~~   77 (242)
T 2bka_A           17 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-------------------YKNVNQEVVDFEKLDD   77 (242)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-------------------GGGCEEEECCGGGGGG
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc-------------------cCCceEEecCcCCHHH
Confidence            568999999999999999999999999  9999999876432210                   1468899999999999


Q ss_pred             HHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCCchhhhchhhHHHHHHH
Q 016901          157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKR  236 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~~Y~~sK~  236 (380)
                      +.++++++|+||||||..... .++...+++|+.++.++++++++.++++||++||.+++..        +...|+.+|+
T Consensus        78 ~~~~~~~~d~vi~~ag~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~--------~~~~Y~~sK~  148 (242)
T 2bka_A           78 YASAFQGHDVGFCCLGTTRGK-AGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKS--------SNFLYLQVKG  148 (242)
T ss_dssp             GGGGGSSCSEEEECCCCCHHH-HHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT--------CSSHHHHHHH
T ss_pred             HHHHhcCCCEEEECCCccccc-CCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCCC--------CcchHHHHHH
Confidence            999999999999999965321 1234457899999999999999999999999999887431        2246999999


Q ss_pred             HHHHHHHHCCC-CEEEEecCcccCCCcccccccce---eeccCC--cccCCCCCHHHHHHHHHHHHhCCCCccCcEEEEe
Q 016901          237 KAEEALIASGL-PYTIVRPGGMERPTDAYKETHNI---TLSQED--TLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVI  310 (380)
Q Consensus       237 ~~E~~l~~~g~-~~~ivRpg~v~gp~~~~~~~~~~---~~~~~~--~~~~~~i~~~DvA~~i~~~l~~~~~~~~~~~ni~  310 (380)
                      .+|.+++..++ ++++||||+++||..........   ......  ...+.+++++|+|++++.++.++..  .+.+.+.
T Consensus       149 ~~e~~~~~~~~~~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~--~~~~~~~  226 (242)
T 2bka_A          149 EVEAKVEELKFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPRD--KQMELLE  226 (242)
T ss_dssp             HHHHHHHTTCCSEEEEEECCEEECTTGGGSHHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSCCC--SSEEEEE
T ss_pred             HHHHHHHhcCCCCeEEEcCceecCCCCCCcHHHHHHHHhhcccCccccCCcccCHHHHHHHHHHHHhCccc--cCeeEee
Confidence            99999999999 59999999999996422100000   000001  0123579999999999999988763  3455555


Q ss_pred             c
Q 016901          311 A  311 (380)
Q Consensus       311 ~  311 (380)
                      +
T Consensus       227 ~  227 (242)
T 2bka_A          227 N  227 (242)
T ss_dssp             H
T ss_pred             H
Confidence            4

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.96  E-value=4.2e-28  Score=227.89  Aligned_cols=219  Identities=18%  Similarity=0.199  Sum_probs=166.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCc-------hhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCC
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV-------QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLE  152 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~  152 (380)
                      +|+|+||||||+||++++++|+++|++|++++|+.       ++...+. .+..               .+++++.+|++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~-~l~~---------------~~v~~v~~D~~   65 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELID-NYQS---------------LGVILLEGDIN   65 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHH-HHHH---------------TTCEEEECCTT
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHH-HHHh---------------CCCEEEEeCCC
Confidence            46899999999999999999999999999999987       3333221 1111               56899999999


Q ss_pred             ChhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcC-CCEEEEEccCCCCCCCCchhhhch-hhH
Q 016901          153 KRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK-VNHFIMVSSLGTNKFGFPAAILNL-FWG  230 (380)
Q Consensus       153 d~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~-v~r~V~~SS~~~~~~~~~~~~~~~-~~~  230 (380)
                      |++++.++++++|+||||||...             +.++.+++++|++.| ++|||+ |+++....  ......+ ...
T Consensus        66 d~~~l~~~~~~~d~vi~~a~~~~-------------~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~--~~~~~~p~~~~  129 (307)
T 2gas_A           66 DHETLVKAIKQVDIVICAAGRLL-------------IEDQVKIIKAIKEAGNVKKFFP-SEFGLDVD--RHDAVEPVRQV  129 (307)
T ss_dssp             CHHHHHHHHTTCSEEEECSSSSC-------------GGGHHHHHHHHHHHCCCSEEEC-SCCSSCTT--SCCCCTTHHHH
T ss_pred             CHHHHHHHHhCCCEEEECCcccc-------------cccHHHHHHHHHhcCCceEEee-cccccCcc--cccCCCcchhH
Confidence            99999999999999999998532             456889999999998 999984 66554211  1111122 356


Q ss_pred             HHHHHHHHHHHHHHCCCCEEEEecCcccCCCcccc--------cccceeeccCCcccCCCCCHHHHHHHHHHHHhCCCCc
Q 016901          231 VLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYK--------ETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLS  302 (380)
Q Consensus       231 Y~~sK~~~E~~l~~~g~~~~ivRpg~v~gp~~~~~--------~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~~~~  302 (380)
                      | .+|..+|+++++.|+++++||||.++++.....        ....+.+.........+++++|+|++++.++.++. .
T Consensus       130 y-~sK~~~e~~~~~~~i~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~-~  207 (307)
T 2gas_A          130 F-EEKASIRRVIEAEGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPN-T  207 (307)
T ss_dssp             H-HHHHHHHHHHHHHTCCBEEEECCEETTTTGGGTTCTTCSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHHTCGG-G
T ss_pred             H-HHHHHHHHHHHHcCCCeEEEEcceeeccccccccccccccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHHcCcc-c
Confidence            8 999999999999999999999999988643211        11112222222223357999999999999998865 4


Q ss_pred             cCcEEEEecC-CCCCcchHHHHHHhcCCCCC
Q 016901          303 YCKVVEVIAE-TTAPLTPMEELLAKIPSQRA  332 (380)
Q Consensus       303 ~~~~~ni~~~-~~~s~~~~~e~~~~~~~~~~  332 (380)
                      .+++|++.++ +..|..|+++.+.++.|...
T Consensus       208 ~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~  238 (307)
T 2gas_A          208 LNKAVHIRLPKNYLTQNEVIALWEKKIGKTL  238 (307)
T ss_dssp             TTEEEECCCGGGEEEHHHHHHHHHHHHTSCC
T ss_pred             cCceEEEeCCCCcCCHHHHHHHHHHHhCCCC
Confidence            5778888764 67899999999999998754

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.96  E-value=3e-28  Score=228.34  Aligned_cols=217  Identities=15%  Similarity=0.061  Sum_probs=157.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      |+|||||||||||++|+++|+++||+|++++|++.+                         ..+   ..|    +...+.
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~-------------------------~~~---~~~----~~~~~~   48 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP-------------------------GRI---TWD----ELAASG   48 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT-------------------------TEE---EHH----HHHHHC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc-------------------------Cee---ecc----hhhHhh
Confidence            689999999999999999999999999999998642                         111   122    223455


Q ss_pred             hcCCCEEEEccccCccccC-C-----CCCcchhhHHHHHHHHHHHHHcCCC--EEEEEccCCCCCCCC-----chhhhch
Q 016901          161 LGNASVVICCIGASEKEVF-D-----ITGPYRIDFQATKNLVDAATIAKVN--HFIMVSSLGTNKFGF-----PAAILNL  227 (380)
Q Consensus       161 ~~~~d~Vi~~Ag~~~~~~~-~-----~~~~~~~nv~g~~~ll~a~~~~~v~--r~V~~SS~~~~~~~~-----~~~~~~~  227 (380)
                      +.++|+|||+||....... .     ....++.|+.+|.++++++++.+.+  +||+.||.+++....     ++.+..+
T Consensus        49 l~~~d~vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~  128 (298)
T 4b4o_A           49 LPSCDAAVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGD  128 (298)
T ss_dssp             CCSCSEEEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSC
T ss_pred             ccCCCEEEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccCCccc
Confidence            7899999999985322211 1     1223678999999999999987754  588888887754321     2223334


Q ss_pred             hhHHHHHHHHHHHHH--HHCCCCEEEEecCcccCCCccccc-------ccceeeccCCcccCCCCCHHHHHHHHHHHHhC
Q 016901          228 FWGVLLWKRKAEEAL--IASGLPYTIVRPGGMERPTDAYKE-------THNITLSQEDTLFGGQVSNLQVAELLACMAKN  298 (380)
Q Consensus       228 ~~~Y~~sK~~~E~~l--~~~g~~~~ivRpg~v~gp~~~~~~-------~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~  298 (380)
                      ...|...|...|...  .+.+++++++||+.||||++....       ............+.+|||++|+|+++..++++
T Consensus       129 ~~~~~~~~~~~e~~~~~~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~ihv~Dva~a~~~~~~~  208 (298)
T 4b4o_A          129 FDFFSNLVTKWEAAARLPGDSTRQVVVRSGVVLGRGGGAMGHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGILTHALEA  208 (298)
T ss_dssp             SSHHHHHHHHHHHHHCCSSSSSEEEEEEECEEECTTSHHHHHHHHHHHTTCCCCBTTSCSBCCEEEHHHHHHHHHHHHHC
T ss_pred             cchhHHHHHHHHHHHHhhccCCceeeeeeeeEEcCCCCchhHHHHHHhcCCcceecccCceeecCcHHHHHHHHHHHHhC
Confidence            445666666666543  357899999999999999753211       11111122333445789999999999999998


Q ss_pred             CCCccCcEEEEecCCCCCcchHHHHHHhcCCCC
Q 016901          299 RSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (380)
Q Consensus       299 ~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~  331 (380)
                      +..  .++||+++++..|..|+++.+++.+++.
T Consensus       209 ~~~--~g~yn~~~~~~~t~~e~~~~ia~~lgrp  239 (298)
T 4b4o_A          209 NHV--HGVLNGVAPSSATNAEFAQTFGAALGRR  239 (298)
T ss_dssp             TTC--CEEEEESCSCCCBHHHHHHHHHHHHTCC
T ss_pred             CCC--CCeEEEECCCccCHHHHHHHHHHHhCcC
Confidence            764  6699999999999999999999999854

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.96  E-value=5.2e-29  Score=258.32  Aligned_cols=235  Identities=14%  Similarity=0.152  Sum_probs=178.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~-G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      +++|+|||||||||||++++++|+++ |++|++++|+..+...+.                  ...+++++.+|++|.++
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~------------------~~~~v~~v~~Dl~d~~~  374 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL------------------NHPHFHFVEGDISIHSE  374 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGT------------------TCTTEEEEECCTTTCHH
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhc------------------cCCceEEEECCCCCcHH
Confidence            46789999999999999999999998 899999999876532210                  11578999999999765


Q ss_pred             -HHHHhcCCCEEEEccccCccc--cCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCC-----chhh----
Q 016901          157 -IEPALGNASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF-----PAAI----  224 (380)
Q Consensus       157 -~~~a~~~~d~Vi~~Ag~~~~~--~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~-----~~~~----  224 (380)
                       +.++++++|+||||||.....  ..++...+++|+.|+.+++++|.+.+ +||||+||.+++....     +..+    
T Consensus       375 ~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~r~V~~SS~~vyg~~~~~~~~E~~~~~~~  453 (660)
T 1z7e_A          375 WIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIV  453 (660)
T ss_dssp             HHHHHHHHCSEEEECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCSSSBCTTTCCEEE
T ss_pred             HHHHhhcCCCEEEECceecCccccccCHHHHHHhhhHHHHHHHHHHHHhC-CEEEEEecHHHcCCCCCcccCCCcccccc
Confidence             778889999999999865321  12344567899999999999999998 8999999987643211     1110    


Q ss_pred             ---hchhhHHHHHHHHHHHHHH----HCCCCEEEEecCcccCCCcccc-------------------cccceeeccCCcc
Q 016901          225 ---LNLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYK-------------------ETHNITLSQEDTL  278 (380)
Q Consensus       225 ---~~~~~~Y~~sK~~~E~~l~----~~g~~~~ivRpg~v~gp~~~~~-------------------~~~~~~~~~~~~~  278 (380)
                         ..+.+.|+.+|+.+|.+++    +.|++++++|||++|||+....                   ....+.+......
T Consensus       454 ~p~~~p~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~  533 (660)
T 1z7e_A          454 GPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQ  533 (660)
T ss_dssp             CCTTCTTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCC
T ss_pred             CcccCCCCCcHHHHHHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCe
Confidence               1345679999999999885    3699999999999999975310                   0011111112223


Q ss_pred             cCCCCCHHHHHHHHHHHHhCCC-CccCcEEEEecCC-CCCcchHHHHHHhcCCCC
Q 016901          279 FGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET-TAPLTPMEELLAKIPSQR  331 (380)
Q Consensus       279 ~~~~i~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~-~~s~~~~~e~~~~~~~~~  331 (380)
                      ...++|++|+|++++.+++++. ...+++||+++++ ..++.|+++.+.+.++..
T Consensus       534 ~~~~i~v~Dva~ai~~~l~~~~~~~~g~~~ni~~~~~~~s~~el~~~i~~~~g~~  588 (660)
T 1z7e_A          534 KRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKH  588 (660)
T ss_dssp             EEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCGGGEEEHHHHHHHHHHHHHHC
T ss_pred             EEEEEEHHHHHHHHHHHHhCccccCCCeEEEECCCCCCcCHHHHHHHHHHHhcCC
Confidence            3468999999999999998754 1347899999986 789999999999988764

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.96  E-value=8.8e-29  Score=237.92  Aligned_cols=229  Identities=13%  Similarity=0.079  Sum_probs=168.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCC-----CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCCh
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLG-----FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G-----~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~  154 (380)
                      +|+|||||||||||++++++|+++|     ++|++++|+.....                    ....+++++.+|++|.
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~--------------------~~~~~~~~~~~Dl~d~   60 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW--------------------HEDNPINYVQCDISDP   60 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC--------------------CCSSCCEEEECCTTSH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc--------------------cccCceEEEEeecCCH
Confidence            3689999999999999999999999     99999999875421                    0115789999999999


Q ss_pred             hcHHHHhcC---CCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHc--CCCEEE-------EEccCCCCCCC---
Q 016901          155 VQIEPALGN---ASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA--KVNHFI-------MVSSLGTNKFG---  219 (380)
Q Consensus       155 ~~~~~a~~~---~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~--~v~r~V-------~~SS~~~~~~~---  219 (380)
                      +++.+++++   +|+||||||...   .++...+++|+.++.+++++|++.  ++++||       |+||.+++...   
T Consensus        61 ~~~~~~~~~~~~~d~vih~a~~~~---~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~  137 (364)
T 2v6g_A           61 DDSQAKLSPLTDVTHVFYVTWANR---STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESH  137 (364)
T ss_dssp             HHHHHHHTTCTTCCEEEECCCCCC---SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCC
T ss_pred             HHHHHHHhcCCCCCEEEECCCCCc---chHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccC
Confidence            999999988   999999998653   234456789999999999999988  789998       78987764321   


Q ss_pred             -C---chhhhc-hhhHHHHHHHHHHHHHHHCC-CCEEEEecCcccCCCcccccc---------------c-ceeeccCC-
Q 016901          220 -F---PAAILN-LFWGVLLWKRKAEEALIASG-LPYTIVRPGGMERPTDAYKET---------------H-NITLSQED-  276 (380)
Q Consensus       220 -~---~~~~~~-~~~~Y~~sK~~~E~~l~~~g-~~~~ivRpg~v~gp~~~~~~~---------------~-~~~~~~~~-  276 (380)
                       .   +..+.. ....|......+.++.+++| ++++++||+++|||+......               + .+.+.... 
T Consensus       138 ~~~~~E~~~~~~~~~~y~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~  217 (364)
T 2v6g_A          138 DPPYTEDLPRLKYMNFYYDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKA  217 (364)
T ss_dssp             CSSBCTTSCCCSSCCHHHHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCHH
T ss_pred             CCCCCccccCCccchhhHHHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCcc
Confidence             1   111111 13457443333333333366 999999999999997532111               0 00111111 


Q ss_pred             --cccCCCCCHHHHHHHHHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCCCCC
Q 016901          277 --TLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (380)
Q Consensus       277 --~~~~~~i~~~DvA~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~~  332 (380)
                        ..+...++++|+|++++.+++++. ..+++||+++++..|+.|+++.+.+.+|...
T Consensus       218 ~~~~~~~~~~v~Dva~a~~~~~~~~~-~~g~~~ni~~~~~~s~~e~~~~i~~~~g~~~  274 (364)
T 2v6g_A          218 AWDGYSDCSDADLIAEHHIWAAVDPY-AKNEAFNVSNGDVFKWKHFWKVLAEQFGVEC  274 (364)
T ss_dssp             HHHSCBCCEEHHHHHHHHHHHHHCGG-GTTEEEEECCSCCBCHHHHHHHHHHHHTCCB
T ss_pred             cccccCCCCcHHHHHHHHHHHHhCCC-CCCceEEecCCCcCCHHHHHHHHHHHhCCCC
Confidence              111245788999999999998865 3578999999999999999999999998654

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.96  E-value=7.3e-28  Score=218.37  Aligned_cols=203  Identities=18%  Similarity=0.160  Sum_probs=150.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      +++|+||||||+|+||++++++|+++| ++|++++|++++...+                   ...+++++.+|++|+++
T Consensus        21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~-------------------~~~~~~~~~~Dl~d~~~   81 (236)
T 3qvo_A           21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP-------------------YPTNSQIIMGDVLNHAA   81 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS-------------------CCTTEEEEECCTTCHHH
T ss_pred             CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc-------------------ccCCcEEEEecCCCHHH
Confidence            356899999999999999999999999 8999999998754321                   12579999999999999


Q ss_pred             HHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCCch---hhhchhhHHHH
Q 016901          157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPA---AILNLFWGVLL  233 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~~---~~~~~~~~Y~~  233 (380)
                      +.++++++|+||||||...            ....++++++++++.+++|||++||.+++......   ........+..
T Consensus        82 ~~~~~~~~D~vv~~a~~~~------------~~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~~~~~~~  149 (236)
T 3qvo_A           82 LKQAMQGQDIVYANLTGED------------LDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAVIGEPLK  149 (236)
T ss_dssp             HHHHHTTCSEEEEECCSTT------------HHHHHHHHHHHHHHTTCCEEEEECCCCC----------------CGGGH
T ss_pred             HHHHhcCCCEEEEcCCCCc------------hhHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhcccchHH
Confidence            9999999999999998521            12457899999999999999999998874322110   00001112334


Q ss_pred             HHHHHHHHHHHCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHHHHhCCCCccCcEEEEecCC
Q 016901          234 WKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAET  313 (380)
Q Consensus       234 sK~~~E~~l~~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~~~~~~~~~ni~~~~  313 (380)
                      .+..+|+++++.|+++++||||+++++....    ...........+.+++++|+|++++.++.++....+++|++.++.
T Consensus       150 ~~~~~~~~l~~~gi~~~~vrPg~i~~~~~~~----~~~~~~~~~~~~~~i~~~DvA~~i~~ll~~~~~~~g~~~~i~~~~  225 (236)
T 3qvo_A          150 PFRRAADAIEASGLEYTILRPAWLTDEDIID----YELTSRNEPFKGTIVSRKSVAALITDIIDKPEKHIGENIGINQPG  225 (236)
T ss_dssp             HHHHHHHHHHTSCSEEEEEEECEEECCSCCC----CEEECTTSCCSCSEEEHHHHHHHHHHHHHSTTTTTTEEEEEECSS
T ss_pred             HHHHHHHHHHHCCCCEEEEeCCcccCCCCcc----eEEeccCCCCCCcEECHHHHHHHHHHHHcCcccccCeeEEecCCC
Confidence            5566677888899999999999999874311    111122222234579999999999999999874568999999987


Q ss_pred             CC
Q 016901          314 TA  315 (380)
Q Consensus       314 ~~  315 (380)
                      ..
T Consensus       226 ~~  227 (236)
T 3qvo_A          226 TD  227 (236)
T ss_dssp             CC
T ss_pred             CC
Confidence            43

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.95  E-value=1.1e-27  Score=230.02  Aligned_cols=221  Identities=18%  Similarity=0.144  Sum_probs=167.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcC-CCChhcH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECD-LEKRVQI  157 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D-l~d~~~~  157 (380)
                      .+|+|+|||||||||++++++|+++|++|++++|++++...  +.+..              ..+++++.+| ++|++++
T Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~--~~l~~--------------~~~v~~v~~D~l~d~~~l   67 (352)
T 1xgk_A            4 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQA--------------IPNVTLFQGPLLNNVPLM   67 (352)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHHT--------------STTEEEEESCCTTCHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhH--HHHhh--------------cCCcEEEECCccCCHHHH
Confidence            35789999999999999999999999999999998875421  11110              1468999999 9999999


Q ss_pred             HHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcC-CCEEEEEccCCCCCCCCchhhhchhhHHHHHHH
Q 016901          158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK-VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKR  236 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~-v~r~V~~SS~~~~~~~~~~~~~~~~~~Y~~sK~  236 (380)
                      .++++++|+||||++...         ...|..+ ++++++|++.+ ++||||+||.+...++.     .+...|+.+|+
T Consensus        68 ~~~~~~~d~Vi~~a~~~~---------~~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~~~~~-----~~~~~y~~sK~  132 (352)
T 1xgk_A           68 DTLFEGAHLAFINTTSQA---------GDEIAIG-KDLADAAKRAGTIQHYIYSSMPDHSLYGP-----WPAVPMWAPKF  132 (352)
T ss_dssp             HHHHTTCSEEEECCCSTT---------SCHHHHH-HHHHHHHHHHSCCSEEEEEECCCGGGTSS-----CCCCTTTHHHH
T ss_pred             HHHHhcCCEEEEcCCCCC---------cHHHHHH-HHHHHHHHHcCCccEEEEeCCccccccCC-----CCCccHHHHHH
Confidence            999999999999987431         1457776 99999999999 99999999986322221     12246999999


Q ss_pred             HHHHHHHHCCCCEEEEecCcccCCCcccc----------cccce--eeccCCcccCCCCCH-HHHHHHHHHHHhCCC-Cc
Q 016901          237 KAEEALIASGLPYTIVRPGGMERPTDAYK----------ETHNI--TLSQEDTLFGGQVSN-LQVAELLACMAKNRS-LS  302 (380)
Q Consensus       237 ~~E~~l~~~g~~~~ivRpg~v~gp~~~~~----------~~~~~--~~~~~~~~~~~~i~~-~DvA~~i~~~l~~~~-~~  302 (380)
                      .+|+++++.|+++++|||| +||+.....          .....  .+.........++++ +|+|++++.++.++. ..
T Consensus       133 ~~E~~~~~~gi~~~ivrpg-~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~~~~  211 (352)
T 1xgk_A          133 TVENYVRQLGLPSTFVYAG-IYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKW  211 (352)
T ss_dssp             HHHHHHHTSSSCEEEEEEC-EEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHH
T ss_pred             HHHHHHHHcCCCEEEEecc-eecCCchhcccccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCCchhh
Confidence            9999999999999999998 467643211          01111  111111222357999 899999999998752 12


Q ss_pred             cCcEEEEecCCCCCcchHHHHHHhcCCCCC
Q 016901          303 YCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (380)
Q Consensus       303 ~~~~~ni~~~~~~s~~~~~e~~~~~~~~~~  332 (380)
                      .+++||+++ ...|..|+++.+.+..|...
T Consensus       212 ~g~~~~l~~-~~~s~~e~~~~i~~~~G~~~  240 (352)
T 1xgk_A          212 NGHRIALTF-ETLSPVQVCAAFSRALNRRV  240 (352)
T ss_dssp             TTCEEEECS-EEECHHHHHHHHHHHHTSCE
T ss_pred             CCeEEEEec-CCCCHHHHHHHHHHHHCCCC
Confidence            489999996 56899999999999998753

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.95  E-value=6.1e-28  Score=228.46  Aligned_cols=221  Identities=15%  Similarity=0.142  Sum_probs=165.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCc-h-----hHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCC
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV-Q-----RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLE  152 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~  152 (380)
                      ++|+|+||||||+||++++++|+++|++|++++|+. +     +...+. .+..               .+++++.+|++
T Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~-~~~~---------------~~v~~v~~D~~   66 (321)
T 3c1o_A            3 HMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLRE-EFRS---------------MGVTIIEGEME   66 (321)
T ss_dssp             -CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHH-HHHH---------------TTCEEEECCTT
T ss_pred             cccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHH-Hhhc---------------CCcEEEEecCC
Confidence            357899999999999999999999999999999986 2     222211 1111               57899999999


Q ss_pred             ChhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcC-CCEEEEEccCCCCCCCCchhhhch-hhH
Q 016901          153 KRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK-VNHFIMVSSLGTNKFGFPAAILNL-FWG  230 (380)
Q Consensus       153 d~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~-v~r~V~~SS~~~~~~~~~~~~~~~-~~~  230 (380)
                      |++++.++++++|+||||++...             +.++.+++++|++.| ++|||+ |+++...  .......+ ...
T Consensus        67 d~~~l~~a~~~~d~vi~~a~~~~-------------~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~--~~~~~~~p~~~~  130 (321)
T 3c1o_A           67 EHEKMVSVLKQVDIVISALPFPM-------------ISSQIHIINAIKAAGNIKRFLP-SDFGCEE--DRIKPLPPFESV  130 (321)
T ss_dssp             CHHHHHHHHTTCSEEEECCCGGG-------------SGGGHHHHHHHHHHCCCCEEEC-SCCSSCG--GGCCCCHHHHHH
T ss_pred             CHHHHHHHHcCCCEEEECCCccc-------------hhhHHHHHHHHHHhCCccEEec-cccccCc--cccccCCCcchH
Confidence            99999999999999999998532             456889999999998 999983 6555321  11111122 456


Q ss_pred             HHHHHHHHHHHHHHCCCCEEEEecCcccCCCccc--------ccccceeeccCCcccCCCCCHHHHHHHHHHHHhCCCCc
Q 016901          231 VLLWKRKAEEALIASGLPYTIVRPGGMERPTDAY--------KETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLS  302 (380)
Q Consensus       231 Y~~sK~~~E~~l~~~g~~~~ivRpg~v~gp~~~~--------~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~~~~  302 (380)
                      | .+|..+|+++++.|+++++||||.++++....        .....+...........+++++|+|++++.++.++. .
T Consensus       131 y-~sK~~~e~~~~~~~~~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~-~  208 (321)
T 3c1o_A          131 L-EKKRIIRRAIEAAALPYTYVSANCFGAYFVNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACDPR-C  208 (321)
T ss_dssp             H-HHHHHHHHHHHHHTCCBEEEECCEEHHHHHHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHHHHHCGG-G
T ss_pred             H-HHHHHHHHHHHHcCCCeEEEEeceeccccccccccccccccccCceEEecCCCcceeEeeHHHHHHHHHHHHhCcc-c
Confidence            8 99999999999999999999999988753210        011112222222223358999999999999999876 4


Q ss_pred             cCcEEEEec-CCCCCcchHHHHHHhcCCCCCC
Q 016901          303 YCKVVEVIA-ETTAPLTPMEELLAKIPSQRAE  333 (380)
Q Consensus       303 ~~~~~ni~~-~~~~s~~~~~e~~~~~~~~~~~  333 (380)
                      .+++|++.+ ++..|..|+++.+.++.|....
T Consensus       209 ~g~~~~~~g~~~~~t~~e~~~~~~~~~g~~~~  240 (321)
T 3c1o_A          209 CNRIVIYRPPKNIISQNELISLWEAKSGLSFK  240 (321)
T ss_dssp             TTEEEECCCGGGEEEHHHHHHHHHHHHTSCCC
T ss_pred             cCeEEEEeCCCCcccHHHHHHHHHHHcCCcce
Confidence            578888876 4788999999999999987643

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.95  E-value=3.3e-28  Score=224.62  Aligned_cols=215  Identities=16%  Similarity=0.114  Sum_probs=167.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      |+|||||||||||++++++|+ +|++|++++|++...                        .+   +.+|++|++++.++
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~~------------------------~~---~~~Dl~~~~~~~~~   52 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEIQ------------------------GG---YKLDLTDFPRLEDF   52 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCCT------------------------TC---EECCTTSHHHHHHH
T ss_pred             CEEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcCC------------------------CC---ceeccCCHHHHHHH
Confidence            479999999999999999999 589999999986320                        12   78999999999999


Q ss_pred             hcC--CCEEEEccccCccc--cCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCC----chhhhchhhHHH
Q 016901          161 LGN--ASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF----PAAILNLFWGVL  232 (380)
Q Consensus       161 ~~~--~d~Vi~~Ag~~~~~--~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~----~~~~~~~~~~Y~  232 (380)
                      +++  +|+||||||.....  ..++...+++|+.++.++++++++.++ +|||+||.+++....    +..+..+...|+
T Consensus        53 ~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~iv~~SS~~~~~~~~~~~~e~~~~~~~~~Y~  131 (273)
T 2ggs_A           53 IIKKRPDVIINAAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVIDS-YIVHISTDYVFDGEKGNYKEEDIPNPINYYG  131 (273)
T ss_dssp             HHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC-EEEEEEEGGGSCSSSCSBCTTSCCCCSSHHH
T ss_pred             HHhcCCCEEEECCcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhCC-eEEEEecceeEcCCCCCcCCCCCCCCCCHHH
Confidence            976  99999999965422  124455688999999999999999886 999999987743221    112233456899


Q ss_pred             HHHHHHHHHHHHCCCCEEEEecCcccCCCcccc-------cccceeeccCCcccCCCCCHHHHHHHHHHHHhCCCCccCc
Q 016901          233 LWKRKAEEALIASGLPYTIVRPGGMERPTDAYK-------ETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCK  305 (380)
Q Consensus       233 ~sK~~~E~~l~~~g~~~~ivRpg~v~gp~~~~~-------~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~~~~~~~  305 (380)
                      .+|+++|.+++.  +++++|||+.+||+.....       ......... .  ...+++++|+|++++.+++++.   ++
T Consensus       132 ~sK~~~e~~~~~--~~~~~iR~~~v~G~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~dva~~i~~~~~~~~---~g  203 (273)
T 2ggs_A          132 LSKLLGETFALQ--DDSLIIRTSGIFRNKGFPIYVYKTLKEGKTVFAFK-G--YYSPISARKLASAILELLELRK---TG  203 (273)
T ss_dssp             HHHHHHHHHHCC--TTCEEEEECCCBSSSSHHHHHHHHHHTTCCEEEES-C--EECCCBHHHHHHHHHHHHHHTC---CE
T ss_pred             HHHHHHHHHHhC--CCeEEEeccccccccHHHHHHHHHHHcCCCEEeec-C--CCCceEHHHHHHHHHHHHhcCc---CC
Confidence            999999999987  8999999999998532111       001111111 1  4478999999999999998764   55


Q ss_pred             EEEEecCCCCCcchHHHHHHhcCCCCCC
Q 016901          306 VVEVIAETTAPLTPMEELLAKIPSQRAE  333 (380)
Q Consensus       306 ~~ni~~~~~~s~~~~~e~~~~~~~~~~~  333 (380)
                      +||+++ +..+..|+++.+.+.+|....
T Consensus       204 ~~~i~~-~~~s~~e~~~~~~~~~g~~~~  230 (273)
T 2ggs_A          204 IIHVAG-ERISRFELALKIKEKFNLPGE  230 (273)
T ss_dssp             EEECCC-CCEEHHHHHHHHHHHTTCCSC
T ss_pred             eEEECC-CcccHHHHHHHHHHHhCCChh
Confidence            999999 889999999999999987643

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.95  E-value=9.8e-28  Score=226.81  Aligned_cols=220  Identities=16%  Similarity=0.165  Sum_probs=165.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCch-hHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ-RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      +++|+||||||+||++++++|+++|++|++++|+.+ +...+. .+..               .+++++.+|++|++++.
T Consensus        11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-~l~~---------------~~v~~v~~Dl~d~~~l~   74 (318)
T 2r6j_A           11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLD-EFQS---------------LGAIIVKGELDEHEKLV   74 (318)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHH-HHHH---------------TTCEEEECCTTCHHHHH
T ss_pred             CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHH-Hhhc---------------CCCEEEEecCCCHHHHH
Confidence            358999999999999999999999999999999875 322221 1111               57899999999999999


Q ss_pred             HHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcC-CCEEEEEccCCCCCCCCchhhhch-hhHHHHHHH
Q 016901          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK-VNHFIMVSSLGTNKFGFPAAILNL-FWGVLLWKR  236 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~-v~r~V~~SS~~~~~~~~~~~~~~~-~~~Y~~sK~  236 (380)
                      ++++++|+|||+++...             +.++.+++++|++.+ ++|||+ |+++....  ......+ ...| .+|.
T Consensus        75 ~a~~~~d~vi~~a~~~~-------------~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~--~~~~~~p~~~~y-~sK~  137 (318)
T 2r6j_A           75 ELMKKVDVVISALAFPQ-------------ILDQFKILEAIKVAGNIKRFLP-SDFGVEED--RINALPPFEALI-ERKR  137 (318)
T ss_dssp             HHHTTCSEEEECCCGGG-------------STTHHHHHHHHHHHCCCCEEEC-SCCSSCTT--TCCCCHHHHHHH-HHHH
T ss_pred             HHHcCCCEEEECCchhh-------------hHHHHHHHHHHHhcCCCCEEEe-eccccCcc--cccCCCCcchhH-HHHH
Confidence            99999999999998531             456899999999998 999985 66654211  1111122 3457 9999


Q ss_pred             HHHHHHHHCCCCEEEEecCcccCCCccc-----ccccceeeccCCcccCCCCCHHHHHHHHHHHHhCCCCccCcEEEEec
Q 016901          237 KAEEALIASGLPYTIVRPGGMERPTDAY-----KETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIA  311 (380)
Q Consensus       237 ~~E~~l~~~g~~~~ivRpg~v~gp~~~~-----~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~~~~~~~~~ni~~  311 (380)
                      .+|+++++.|+++++||||.++++....     .......+.........+++++|+|++++.++.++. ..+++|++.+
T Consensus       138 ~~e~~~~~~~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~-~~~~~~~~~g  216 (318)
T 2r6j_A          138 MIRRAIEEANIPYTYVSANCFASYFINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPR-ALNRVVIYRP  216 (318)
T ss_dssp             HHHHHHHHTTCCBEEEECCEEHHHHHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGG-GTTEEEECCC
T ss_pred             HHHHHHHhcCCCeEEEEcceehhhhhhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCcc-ccCeEEEecC
Confidence            9999999999999999999887642110     011122222222233468999999999999998865 4577888875


Q ss_pred             -CCCCCcchHHHHHHhcCCCCCC
Q 016901          312 -ETTAPLTPMEELLAKIPSQRAE  333 (380)
Q Consensus       312 -~~~~s~~~~~e~~~~~~~~~~~  333 (380)
                       ++..|..|+++.+.++.|....
T Consensus       217 ~~~~~s~~e~~~~~~~~~g~~~~  239 (318)
T 2r6j_A          217 STNIITQLELISRWEKKIGKKFK  239 (318)
T ss_dssp             GGGEEEHHHHHHHHHHHHTCCCE
T ss_pred             CCCccCHHHHHHHHHHHhCCCCc
Confidence             4778999999999999987643

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.95  E-value=3.3e-28  Score=245.34  Aligned_cols=222  Identities=15%  Similarity=0.034  Sum_probs=161.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      +|+|||||||||||++|++.|+++|++|++++|+..+.                           ..+.+|+.+.  +.+
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~---------------------------~~v~~d~~~~--~~~  197 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP---------------------------GKRFWDPLNP--ASD  197 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT---------------------------TCEECCTTSC--CTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc---------------------------cceeecccch--hHH
Confidence            68999999999999999999999999999999987531                           1256788753  467


Q ss_pred             HhcCCCEEEEccccCccc---cCCCCCcchhhHHHHHHHHHH-HHHcCCCEEEEEccCCCCCCCCc-----hhhhchhhH
Q 016901          160 ALGNASVVICCIGASEKE---VFDITGPYRIDFQATKNLVDA-ATIAKVNHFIMVSSLGTNKFGFP-----AAILNLFWG  230 (380)
Q Consensus       160 a~~~~d~Vi~~Ag~~~~~---~~~~~~~~~~nv~g~~~ll~a-~~~~~v~r~V~~SS~~~~~~~~~-----~~~~~~~~~  230 (380)
                      ++.++|+||||||.....   ..+....+++|+.|+.+++++ +++.++++|||+||.+++.....     +....+...
T Consensus       198 ~l~~~D~Vih~A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~~~~~  277 (516)
T 3oh8_A          198 LLDGADVLVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEILTEESESGDDF  277 (516)
T ss_dssp             TTTTCSEEEECCCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEEECTTSCCCSSH
T ss_pred             hcCCCCEEEECCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCccCCCCCCCcCh
Confidence            788999999999965322   112233578899999999999 66778999999999887541111     111114456


Q ss_pred             HHHHHHHHHHHHH---HCCCCEEEEecCcccCCCccccc-------ccceeeccCCcccCCCCCHHHHHHHHHHHHhCCC
Q 016901          231 VLLWKRKAEEALI---ASGLPYTIVRPGGMERPTDAYKE-------THNITLSQEDTLFGGQVSNLQVAELLACMAKNRS  300 (380)
Q Consensus       231 Y~~sK~~~E~~l~---~~g~~~~ivRpg~v~gp~~~~~~-------~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~~  300 (380)
                      |+.+|...|.++.   ..|+++++||||++|||++....       ..............++||++|+|++++.+++++.
T Consensus       278 y~~~~~~~E~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~  357 (516)
T 3oh8_A          278 LAEVCRDWEHATAPASDAGKRVAFIRTGVALSGRGGMLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIYYRAIVDAQ  357 (516)
T ss_dssp             HHHHHHHHHHTTHHHHHTTCEEEEEEECEEEBTTBSHHHHHHHTTC---CCCCTTSCCEECEEEHHHHHHHHHHHHHCTT
T ss_pred             HHHHHHHHHHHHHHHHhCCCCEEEEEeeEEECCCCChHHHHHHHHHhCCCcccCCCCceEceEeHHHHHHHHHHHHhCcc
Confidence            8999998886643   58999999999999999742211       0000111122233468999999999999999876


Q ss_pred             CccCcEEEEecCCCCCcchHHHHHHhcCCCCC
Q 016901          301 LSYCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (380)
Q Consensus       301 ~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~~  332 (380)
                      .  +++||+++++..++.|+++.+.+++|...
T Consensus       358 ~--~g~~ni~~~~~~s~~el~~~i~~~~g~~~  387 (516)
T 3oh8_A          358 I--SGPINAVAPNPVSNADMTKILATSMHRPA  387 (516)
T ss_dssp             C--CEEEEESCSCCEEHHHHHHHTTC------
T ss_pred             c--CCcEEEECCCCCCHHHHHHHHHHHhCCCC
Confidence            3  56899999999999999999999988643

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.95  E-value=6.2e-28  Score=226.85  Aligned_cols=224  Identities=18%  Similarity=0.201  Sum_probs=165.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhH--HHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRA--ENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +|+|+||||||+||+++++.|+++|++|++++|+.+..  ....+.+..+.            ..+++++.+|++|++++
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~------------~~~v~~v~~D~~d~~~l   71 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK------------ASGANIVHGSIDDHASL   71 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH------------TTTCEEECCCTTCHHHH
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHH------------hCCCEEEEeccCCHHHH
Confidence            57899999999999999999999999999999985321  11111111110            15789999999999999


Q ss_pred             HHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcC-CCEEEEEccCCCCCCCCchhhhch-hhHHHHHH
Q 016901          158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK-VNHFIMVSSLGTNKFGFPAAILNL-FWGVLLWK  235 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~-v~r~V~~SS~~~~~~~~~~~~~~~-~~~Y~~sK  235 (380)
                      .++++++|+|||+++..             ++.++.+++++|++.| ++|||+ |+++....  ......+ ...| .+|
T Consensus        72 ~~~~~~~d~vi~~a~~~-------------~~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~--~~~~~~p~~~~y-~sK  134 (308)
T 1qyc_A           72 VEAVKNVDVVISTVGSL-------------QIESQVNIIKAIKEVGTVKRFFP-SEFGNDVD--NVHAVEPAKSVF-EVK  134 (308)
T ss_dssp             HHHHHTCSEEEECCCGG-------------GSGGGHHHHHHHHHHCCCSEEEC-SCCSSCTT--SCCCCTTHHHHH-HHH
T ss_pred             HHHHcCCCEEEECCcch-------------hhhhHHHHHHHHHhcCCCceEee-cccccCcc--ccccCCcchhHH-HHH
Confidence            99999999999999853             2456789999999998 999985 76664221  1111122 3457 999


Q ss_pred             HHHHHHHHHCCCCEEEEecCcccCCCccc--------ccccceeeccCCcccCCCCCHHHHHHHHHHHHhCCCCccCcEE
Q 016901          236 RKAEEALIASGLPYTIVRPGGMERPTDAY--------KETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVV  307 (380)
Q Consensus       236 ~~~E~~l~~~g~~~~ivRpg~v~gp~~~~--------~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~~~~~~~~~  307 (380)
                      ..+|+++++.|++++++|||+++++....        .....+.+.........+++++|+|++++.++.++. ..+++|
T Consensus       135 ~~~e~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~-~~~~~~  213 (308)
T 1qyc_A          135 AKVRRAIEAEGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPR-TLNKTL  213 (308)
T ss_dssp             HHHHHHHHHHTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGG-GTTEEE
T ss_pred             HHHHHHHHhcCCCeEEEEeceeccccccccccccccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHhCcc-ccCeEE
Confidence            99999999999999999999987642110        011112222222223367999999999999998765 457888


Q ss_pred             EEecC-CCCCcchHHHHHHhcCCCCCC
Q 016901          308 EVIAE-TTAPLTPMEELLAKIPSQRAE  333 (380)
Q Consensus       308 ni~~~-~~~s~~~~~e~~~~~~~~~~~  333 (380)
                      ++.++ +..|..|+++.+.++.|....
T Consensus       214 ~~~g~~~~~s~~e~~~~~~~~~g~~~~  240 (308)
T 1qyc_A          214 YLRLPANTLSLNELVALWEKKIDKTLE  240 (308)
T ss_dssp             ECCCGGGEEEHHHHHHHHHHHTTSCCE
T ss_pred             EEeCCCCccCHHHHHHHHHHHhCCCCc
Confidence            88764 678999999999999987643

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.95  E-value=1.4e-27  Score=221.70  Aligned_cols=235  Identities=14%  Similarity=0.140  Sum_probs=160.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .+++|++|||||+|+||++++++|+++|++|++++|+.++.+++.+.+....          ....++.++.+|++|.++
T Consensus         3 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----------~~~~~~~~~~~D~~~~~~   72 (278)
T 1spx_A            3 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAG----------VSEQNVNSVVADVTTDAG   72 (278)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT----------CCGGGEEEEECCTTSHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcc----------cCCCceeEEecccCCHHH
Confidence            3567899999999999999999999999999999999887776655442111          011468899999999998


Q ss_pred             HHHHhc-------CCCEEEEccccCccc----------cCCCCCcchhhHHHHHHHHHHHHHc----CCCEEEEEccCCC
Q 016901          157 IEPALG-------NASVVICCIGASEKE----------VFDITGPYRIDFQATKNLVDAATIA----KVNHFIMVSSLGT  215 (380)
Q Consensus       157 ~~~a~~-------~~d~Vi~~Ag~~~~~----------~~~~~~~~~~nv~g~~~ll~a~~~~----~v~r~V~~SS~~~  215 (380)
                      ++++++       ++|+||||||.....          ..++...+++|+.|+.++++++...    + ++||++||...
T Consensus        73 ~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~  151 (278)
T 1spx_A           73 QDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIAS  151 (278)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTS
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccc
Confidence            888775       899999999965321          1123344789999999998887543    5 89999999865


Q ss_pred             -CCCCCchhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCccccc--ccce-------eeccCCcc
Q 016901          216 -NKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE--THNI-------TLSQEDTL  278 (380)
Q Consensus       216 -~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~--~~~~-------~~~~~~~~  278 (380)
                       ....      .....|+.+|.+.+.+.+.       +|+++++|+||+++++......  ....       ........
T Consensus       152 ~~~~~------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p  225 (278)
T 1spx_A          152 GLHAT------PDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVP  225 (278)
T ss_dssp             SSSCC------TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCT
T ss_pred             cccCC------CCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcCC
Confidence             3221      2345799999999987752       6999999999999988532110  0000       00000112


Q ss_pred             cCCCCCHHHHHHHHHHHHhCCC-C-ccCcEEEEecCCCCCcchHHHHHHhcC
Q 016901          279 FGGQVSNLQVAELLACMAKNRS-L-SYCKVVEVIAETTAPLTPMEELLAKIP  328 (380)
Q Consensus       279 ~~~~i~~~DvA~~i~~~l~~~~-~-~~~~~~ni~~~~~~s~~~~~e~~~~~~  328 (380)
                      .+.+++++|+|++++.++.++. . ..|++|++.++...+..++++.+.++.
T Consensus       226 ~~~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~~~~~~~~~~~~~  277 (278)
T 1spx_A          226 AGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSLIMGLHCQDFAKLL  277 (278)
T ss_dssp             TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC------------
T ss_pred             CcCCCCHHHHHHHHHHHcCccccCcccCcEEEECCCcccccCcccccHHHHh
Confidence            2457899999999999987643 2 458999999999888999999888764

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.95  E-value=2.6e-28  Score=235.67  Aligned_cols=200  Identities=16%  Similarity=0.036  Sum_probs=162.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      |+|||||||||||++|+++|+++|+ +|++++|+                                      +|.+++.+
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~--------------------------------------~d~~~l~~   42 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ--------------------------------------TKEEELES   42 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT--------------------------------------CCHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC--------------------------------------CCHHHHHH
Confidence            5899999999999999999999998 88776552                                      45677888


Q ss_pred             HhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCC-EEEEEccCCCCCCCCchhhhchhhHHHHHHHHH
Q 016901          160 ALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKA  238 (380)
Q Consensus       160 a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~-r~V~~SS~~~~~~~~~~~~~~~~~~Y~~sK~~~  238 (380)
                      +++++|+|||+||....  .++...+++|+.++.+++++|++.+++ +|||+||.+++.          .+.|+.+|+.+
T Consensus        43 ~~~~~d~Vih~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~----------~~~Y~~sK~~~  110 (369)
T 3st7_A           43 ALLKADFIVHLAGVNRP--EHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ----------DNPYGESKLQG  110 (369)
T ss_dssp             HHHHCSEEEECCCSBCT--TCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGS----------CSHHHHHHHHH
T ss_pred             HhccCCEEEECCcCCCC--CCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcC----------CCCchHHHHHH
Confidence            88899999999986543  355667889999999999999999987 999999988743          34699999999


Q ss_pred             HHHHHH----CCCCEEEEecCcccCCCcccc-------------cccceeeccCCcccCCCCCHHHHHHHHHHHHhCCCC
Q 016901          239 EEALIA----SGLPYTIVRPGGMERPTDAYK-------------ETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSL  301 (380)
Q Consensus       239 E~~l~~----~g~~~~ivRpg~v~gp~~~~~-------------~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~~~  301 (380)
                      |+++++    .|++++++||+++|||+....             ....+.+. .......++|++|+|++++.+++++..
T Consensus       111 E~~~~~~~~~~g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~Dva~~~~~~l~~~~~  189 (369)
T 3st7_A          111 EQLLREYAEEYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVN-DRNVELTLNYVDDIVAEIKRAIEGTPT  189 (369)
T ss_dssp             HHHHHHHHHHHCCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCS-CTTCEEEEEEHHHHHHHHHHHHHTCCC
T ss_pred             HHHHHHHHHHhCCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEec-CCCeEEEEEEHHHHHHHHHHHHhCCcc
Confidence            999875    799999999999999965321             01111111 122223589999999999999998773


Q ss_pred             ccCcEEEEecCCCCCcchHHHHHHhcCCCC
Q 016901          302 SYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (380)
Q Consensus       302 ~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~  331 (380)
                      ..+++||+++++..++.|+++.+.++.+..
T Consensus       190 ~~~~~~~i~~~~~~s~~e~~~~~~~~~g~~  219 (369)
T 3st7_A          190 IENGVPTVPNVFKVTLGEIVDLLYKFKQSR  219 (369)
T ss_dssp             EETTEECCSCCEEEEHHHHHHHHHHHHHHH
T ss_pred             cCCceEEeCCCCceeHHHHHHHHHHHhCCC
Confidence            337999999999999999999999987754

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.95  E-value=2.5e-26  Score=212.88  Aligned_cols=232  Identities=16%  Similarity=0.169  Sum_probs=173.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++++||||||+|+||++++++|+++|++|++++|+......+.+.+..              ..++.++.+|++|.+++
T Consensus        14 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--------------~~~~~~~~~D~~~~~~~   79 (278)
T 2bgk_A           14 LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS--------------PDVISFVHCDVTKDEDV   79 (278)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC--------------TTTEEEEECCTTCHHHH
T ss_pred             ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCC--------------CCceEEEECCCCCHHHH
Confidence            4678999999999999999999999999999999998766554433210              13789999999999988


Q ss_pred             HHHhc-------CCCEEEEccccCcccc--------CCCCCcchhhHHHHHHHHHHHHH----cCCCEEEEEccCCCCCC
Q 016901          158 EPALG-------NASVVICCIGASEKEV--------FDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKF  218 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~~~~--------~~~~~~~~~nv~g~~~ll~a~~~----~~v~r~V~~SS~~~~~~  218 (380)
                      +++++       ++|+||||||......        .++...+++|+.|+.++++++..    .+.++||++||..+...
T Consensus        80 ~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~  159 (278)
T 2bgk_A           80 RNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTA  159 (278)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCC
Confidence            88774       7999999999653211        11233478999999999988865    46679999999876432


Q ss_pred             CCchhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcccccc-cc-e--ee-ccCCcccCCCCCHH
Q 016901          219 GFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-HN-I--TL-SQEDTLFGGQVSNL  286 (380)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~~-~~-~--~~-~~~~~~~~~~i~~~  286 (380)
                      ..     .....|+.+|.+.|.+++.       .|+++++||||+++++....... .. .  .+ .......+.+++++
T Consensus       160 ~~-----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (278)
T 2bgk_A          160 GE-----GVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAE  234 (278)
T ss_dssp             CT-----TSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHH
T ss_pred             CC-----CCCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhcccccccccCCHH
Confidence            21     1345799999999988752       68999999999999985321100 00 0  00 01111234579999


Q ss_pred             HHHHHHHHHHhCCC-CccCcEEEEecCCCCCcchHHHHHHhcC
Q 016901          287 QVAELLACMAKNRS-LSYCKVVEVIAETTAPLTPMEELLAKIP  328 (380)
Q Consensus       287 DvA~~i~~~l~~~~-~~~~~~~ni~~~~~~s~~~~~e~~~~~~  328 (380)
                      |+|++++.++.++. ...|++|++.++...+..++++.+.+++
T Consensus       235 dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e~~~~i~~~~  277 (278)
T 2bgk_A          235 DVADAVAYLAGDESKYVSGLNLVIDGGYTRTNPAFPTALKHGL  277 (278)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTGGGCCTHHHHHSCSCC
T ss_pred             HHHHHHHHHcCcccccCCCCEEEECCcccccCCccchhhhhhc
Confidence            99999999997643 3468999999999899999999987764

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.95  E-value=3.5e-27  Score=215.81  Aligned_cols=221  Identities=13%  Similarity=0.141  Sum_probs=165.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++++||||||+|+||++++++|+++|++|++++|+.++.+.+.+.++..+             .++.++.+|++|++++
T Consensus         9 ~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~D~~~~~~~   75 (255)
T 1fmc_A            9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLG-------------GQAFACRCDITSEQEL   75 (255)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTT-------------CCEEEEECCTTCHHHH
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhC-------------CceEEEEcCCCCHHHH
Confidence            467899999999999999999999999999999999887776665554321             5788999999999988


Q ss_pred             HHHhc-------CCCEEEEccccCccccC-----CCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCCCCc
Q 016901          158 EPALG-------NASVVICCIGASEKEVF-----DITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFP  221 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~~~~~-----~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~~~~  221 (380)
                      +++++       ++|+||||||.......     ++...+++|+.|+.++++++.    +.+.++||++||.......  
T Consensus        76 ~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~--  153 (255)
T 1fmc_A           76 SALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKN--  153 (255)
T ss_dssp             HHHHHHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCC--
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCC--
Confidence            88775       89999999996543211     223347899999999888874    4567899999998764321  


Q ss_pred             hhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcccccccce-eeccCCcccCCCCCHHHHHHHHH
Q 016901          222 AAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNI-TLSQEDTLFGGQVSNLQVAELLA  293 (380)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~~~~~-~~~~~~~~~~~~i~~~DvA~~i~  293 (380)
                          .+...|+.+|.+.|.+++.       .|+++++||||+++++.......... .........+.+++++|+|++++
T Consensus       154 ----~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  229 (255)
T 1fmc_A          154 ----INMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAAL  229 (255)
T ss_dssp             ----TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSSCSCBCHHHHHHHHH
T ss_pred             ----CCCcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccChHHHHHHHhcCCcccCCCHHHHHHHHH
Confidence                2345799999999987652       58999999999999874321100000 00001112345789999999999


Q ss_pred             HHHhCCC-CccCcEEEEecCCCCCc
Q 016901          294 CMAKNRS-LSYCKVVEVIAETTAPL  317 (380)
Q Consensus       294 ~~l~~~~-~~~~~~~ni~~~~~~s~  317 (380)
                      .++.++. ...+++|++.++...|+
T Consensus       230 ~l~~~~~~~~~G~~~~v~gg~~~s~  254 (255)
T 1fmc_A          230 FLCSPAASWVSGQILTVSGGGVQEL  254 (255)
T ss_dssp             HHHSGGGTTCCSCEEEESTTSCCCC
T ss_pred             HHhCCccccCCCcEEEECCceeccC
Confidence            9997643 23588999999987765

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.94  E-value=8.4e-26  Score=208.15  Aligned_cols=224  Identities=15%  Similarity=0.130  Sum_probs=166.8

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCCh
Q 016901           75 ADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (380)
Q Consensus        75 ~~~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~  154 (380)
                      |..+++|++|||||+|+||++++++|+++|++|++++|+.++.++..+.+...+            ..++.++.+|++|.
T Consensus         5 m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~------------~~~~~~~~~Dv~~~   72 (262)
T 3pk0_A            5 MFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLG------------SGKVIGVQTDVSDR   72 (262)
T ss_dssp             TTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTS------------SSCEEEEECCTTSH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhC------------CCcEEEEEcCCCCH
Confidence            445678999999999999999999999999999999999988877766655321            14789999999999


Q ss_pred             hcHHHHhc-------CCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHHHH----cCCCEEEEEccCCCCC
Q 016901          155 VQIEPALG-------NASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNK  217 (380)
Q Consensus       155 ~~~~~a~~-------~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~~~----~~v~r~V~~SS~~~~~  217 (380)
                      ++++++++       ++|+||||||.......      ++...+++|+.|+.++++++..    .+.++||++||.....
T Consensus        73 ~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~  152 (262)
T 3pk0_A           73 AQCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPI  152 (262)
T ss_dssp             HHHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTT
T ss_pred             HHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcc
Confidence            88887764       89999999996533221      2233478999999998887754    3678999999976531


Q ss_pred             CCCchhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHH
Q 016901          218 FGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAE  290 (380)
Q Consensus       218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~  290 (380)
                      .+     ......|+.+|.+.+.+.+.       +|+++++|+||++++|...................+.+.+++|+|+
T Consensus       153 ~~-----~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~  227 (262)
T 3pk0_A          153 TG-----YPGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENGEEYIASMARSIPAGALGTPEDIGH  227 (262)
T ss_dssp             BC-----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTCHHHHHHHHTTSTTSSCBCHHHHHH
T ss_pred             CC-----CCCChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccCHHHHHHHHhcCCCCCCcCHHHHHH
Confidence            11     12345799999999988762       7999999999999987432111000000111122345789999999


Q ss_pred             HHHHHHhCCC-CccCcEEEEecCCCC
Q 016901          291 LLACMAKNRS-LSYCKVVEVIAETTA  315 (380)
Q Consensus       291 ~i~~~l~~~~-~~~~~~~ni~~~~~~  315 (380)
                      +++.++.+.. ...|+++++.+|...
T Consensus       228 ~v~~L~s~~~~~itG~~i~vdGG~~~  253 (262)
T 3pk0_A          228 LAAFLATKEAGYITGQAIAVDGGQVL  253 (262)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred             HHHHHhCccccCCcCCEEEECCCeec
Confidence            9999997643 357899999988755

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.94  E-value=4.2e-27  Score=219.00  Aligned_cols=239  Identities=16%  Similarity=0.140  Sum_probs=177.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++|+||||||+|+||++++++|+++|++|++++|+.++.++..+.++..+.          ...++.++.+|++|.+++
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~----------~~~~~~~~~~Dv~~~~~v   78 (281)
T 3svt_A            9 FQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGA----------NGGAIRYEPTDITNEDET   78 (281)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCC----------SSCEEEEEECCTTSHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCC----------CCceEEEEeCCCCCHHHH
Confidence            4678999999999999999999999999999999999888877776654321          113789999999999888


Q ss_pred             HHHh-------cCCCEEEEccccCcc-c------cCCCCCcchhhHHHHHHHHHHHHH----cCCCEEEEEccCCCCCCC
Q 016901          158 EPAL-------GNASVVICCIGASEK-E------VFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       158 ~~a~-------~~~d~Vi~~Ag~~~~-~------~~~~~~~~~~nv~g~~~ll~a~~~----~~v~r~V~~SS~~~~~~~  219 (380)
                      ++++       +++|+||||||.... .      ..++...+++|+.|+.++++++..    .+.++||++||.......
T Consensus        79 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  158 (281)
T 3svt_A           79 ARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTH  158 (281)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCC
Confidence            7776       378999999996321 1      112334578999999999987753    445599999997653221


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccc--cceeeccCCcccCCCCCHHHHHH
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET--HNITLSQEDTLFGGQVSNLQVAE  290 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~--~~~~~~~~~~~~~~~i~~~DvA~  290 (380)
                            .....|+.+|.+.+.+.+       ..|+++++|+||+++++.......  ............+.+.+++|+|+
T Consensus       159 ------~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~  232 (281)
T 3svt_A          159 ------RWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLPRQGEVEDVAN  232 (281)
T ss_dssp             ------TTCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCSSSSCBCHHHHHH
T ss_pred             ------CCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCCCCCCCCHHHHHH
Confidence                  234579999999998876       267999999999999875321100  00000011122345789999999


Q ss_pred             HHHHHHhCCC-CccCcEEEEecCCCCC-cchHHHHHHhcCCCCC
Q 016901          291 LLACMAKNRS-LSYCKVVEVIAETTAP-LTPMEELLAKIPSQRA  332 (380)
Q Consensus       291 ~i~~~l~~~~-~~~~~~~ni~~~~~~s-~~~~~e~~~~~~~~~~  332 (380)
                      +++.++.+.. ...|++|++.+|...+ ..++.+++.++.+...
T Consensus       233 ~~~~l~s~~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~  276 (281)
T 3svt_A          233 MAMFLLSDAASFVTGQVINVDGGQMLRRGPDFSAMLEPVFGRDA  276 (281)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTGGGSCCCCCHHHHHHHHCTTG
T ss_pred             HHHHHhCcccCCCCCCEEEeCCChhcccCCcchhccccccCCcc
Confidence            9999997643 3468999999988776 7789999988887643

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.94  E-value=3.3e-26  Score=210.49  Aligned_cols=217  Identities=13%  Similarity=0.095  Sum_probs=162.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .+++|++|||||+|+||++++++|+++|++|++++|+.++.++..+.+.                .++.++.+|++|+++
T Consensus         5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------------~~~~~~~~D~~~~~~   68 (259)
T 4e6p_A            5 RLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIG----------------PAAYAVQMDVTRQDS   68 (259)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC----------------TTEEEEECCTTCHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC----------------CCceEEEeeCCCHHH
Confidence            3467899999999999999999999999999999999887766654331                568899999999998


Q ss_pred             HHHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHHH----cC-CCEEEEEccCCCCCC
Q 016901          157 IEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATI----AK-VNHFIMVSSLGTNKF  218 (380)
Q Consensus       157 ~~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~~----~~-v~r~V~~SS~~~~~~  218 (380)
                      ++++++       ++|+||||||......      .++...+++|+.|+.++++++..    .+ .++||++||......
T Consensus        69 v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  148 (259)
T 4e6p_A           69 IDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRG  148 (259)
T ss_dssp             HHHHHHHHHHHSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccC
Confidence            888774       8999999999653221      12334477999999999988753    23 459999999866432


Q ss_pred             CCchhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcccc-----------cccceeeccCCcccC
Q 016901          219 GFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-----------ETHNITLSQEDTLFG  280 (380)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~-----------~~~~~~~~~~~~~~~  280 (380)
                      .      .....|+.+|.+.+.+.+.       .|+++++|+||++++|.....           ..............+
T Consensus       149 ~------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~  222 (259)
T 4e6p_A          149 E------ALVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFG  222 (259)
T ss_dssp             C------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTS
T ss_pred             C------CCChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhccCCCC
Confidence            1      2345799999999988762       589999999999999853211           000000011112345


Q ss_pred             CCCCHHHHHHHHHHHHhCCC-CccCcEEEEecCCCC
Q 016901          281 GQVSNLQVAELLACMAKNRS-LSYCKVVEVIAETTA  315 (380)
Q Consensus       281 ~~i~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~~~  315 (380)
                      .+.+++|+|++++.++.... ...|++|++.+|...
T Consensus       223 r~~~~~dva~~v~~L~s~~~~~itG~~i~vdgG~~~  258 (259)
T 4e6p_A          223 RMGTAEDLTGMAIFLASAESDYIVSQTYNVDGGNWM  258 (259)
T ss_dssp             SCBCTHHHHHHHHHTTSGGGTTCCSCEEEESTTSSC
T ss_pred             CCcCHHHHHHHHHHHhCCccCCCCCCEEEECcChhc
Confidence            67899999999999887543 346899999998754

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.94  E-value=1.4e-26  Score=215.28  Aligned_cols=224  Identities=13%  Similarity=0.117  Sum_probs=162.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ++|+||||||+|+||++++++|+++|++|++++|+.++..++.+..                ..+++++.+|++|.++++
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----------------~~~~~~~~~Dv~~~~~~~   67 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY----------------PDRAEAISLDVTDGERID   67 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHC----------------TTTEEEEECCTTCHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----------------cCCceEEEeeCCCHHHHH
Confidence            5689999999999999999999999999999999988776654321                157999999999998888


Q ss_pred             HHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHH----HHHHHHHHHHcCCCEEEEEccCCCCCCCCc
Q 016901          159 PALG-------NASVVICCIGASEKEV------FDITGPYRIDFQA----TKNLVDAATIAKVNHFIMVSSLGTNKFGFP  221 (380)
Q Consensus       159 ~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g----~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~  221 (380)
                      ++++       ++|+||||||......      .++...+++|+.|    ++.+++.+++.+.++||++||......   
T Consensus        68 ~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~---  144 (281)
T 3m1a_A           68 VVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLS---  144 (281)
T ss_dssp             HHHHHHHHHHSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCC---
T ss_pred             HHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCC---
Confidence            7774       7999999999653221      1223347899999    555556667777889999999766432   


Q ss_pred             hhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcccccc---cce-ee---------ccCCcccCC
Q 016901          222 AAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET---HNI-TL---------SQEDTLFGG  281 (380)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~~---~~~-~~---------~~~~~~~~~  281 (380)
                         ..+...|+.+|.++|.+++.       +|+++++|+||++++|.......   ... ..         .......+.
T Consensus       145 ---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (281)
T 3m1a_A          145 ---FAGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDGSQ  221 (281)
T ss_dssp             ---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC-----
T ss_pred             ---CCCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhccCCC
Confidence               23446799999999988652       79999999999998774211000   000 00         000111234


Q ss_pred             CCCHHHHHHHHHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHh
Q 016901          282 QVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAK  326 (380)
Q Consensus       282 ~i~~~DvA~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~  326 (380)
                      +++++|+|++++.+++++..  +..|+++++....+.+....+.+
T Consensus       222 ~~~~~dva~a~~~~~~~~~~--~~~~~l~s~~~~~i~g~~~~i~~  264 (281)
T 3m1a_A          222 PGDPAKAAAAIRLALDTEKT--PLRLALGGDAVDFLTGHLDSVRA  264 (281)
T ss_dssp             CBCHHHHHHHHHHHHHSSSC--CSEEEESHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHhCCCC--CeEEecCchHHHHHHHHHHHHHH
Confidence            78999999999999998764  77899998875544444444443

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.94  E-value=7.1e-26  Score=206.66  Aligned_cols=217  Identities=14%  Similarity=0.118  Sum_probs=160.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-CchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVR-SVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      +++|++|||||+|+||++++++|+++|++|++++| +.++.+++.+.++..+             .++.++.+|++|.++
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~Dv~d~~~   68 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKG-------------VDSFAIQANVADADE   68 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-------------SCEEEEECCTTCHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC-------------CcEEEEEccCCCHHH
Confidence            35689999999999999999999999999999887 4466666665554422             578899999999988


Q ss_pred             HHHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCCC
Q 016901          157 IEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       157 ~~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~~  219 (380)
                      ++++++       ++|+||||||......      .++...+++|+.|+.++++++    ++.+.++||++||...... 
T Consensus        69 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-  147 (246)
T 3osu_A           69 VKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVG-  147 (246)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC-
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCC-
Confidence            887764       7999999999653321      123345889999999999988    5566789999999754221 


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHH
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELL  292 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i  292 (380)
                           ......|+.+|.+.+.+.+       ..|+++++|+||++.+|...................+.+.+++|+|+++
T Consensus       148 -----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v  222 (246)
T 3osu_A          148 -----NPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQDTDIANTV  222 (246)
T ss_dssp             -----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSCHHHHHHHHTTCTTCSCBCHHHHHHHH
T ss_pred             -----CCCChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence                 1234579999999987765       3689999999999998743211110000011122334578999999999


Q ss_pred             HHHHhCCC-CccCcEEEEecCC
Q 016901          293 ACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       293 ~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      +.++.+.. ...|++|++.+|.
T Consensus       223 ~~l~s~~~~~itG~~i~vdgG~  244 (246)
T 3osu_A          223 AFLASDKAKYITGQTIHVNGGM  244 (246)
T ss_dssp             HHHTSGGGTTCCSCEEEESTTS
T ss_pred             HHHhCccccCCCCCEEEeCCCc
Confidence            99987653 3468999998875

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.94  E-value=6.9e-26  Score=209.75  Aligned_cols=227  Identities=18%  Similarity=0.171  Sum_probs=167.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++|++|||||+|+||++++++|+++|++|++++|+.++.++..+.+.                .++.++.+|++|.+++
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------------~~~~~~~~Dv~~~~~v   72 (271)
T 3tzq_B            9 LENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVG----------------RGAVHHVVDLTNEVSV   72 (271)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHC----------------TTCEEEECCTTCHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC----------------CCeEEEECCCCCHHHH
Confidence            467899999999999999999999999999999999887766654331                5788999999999888


Q ss_pred             HHHhc-------CCCEEEEccccCcc-c-------cCCCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCC
Q 016901          158 EPALG-------NASVVICCIGASEK-E-------VFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKF  218 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~~-~-------~~~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~  218 (380)
                      +++++       ++|+||||||.... .       ..++...+++|+.|+.++++++    ++.+.++||++||......
T Consensus        73 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~  152 (271)
T 3tzq_B           73 RALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAA  152 (271)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSB
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCC
Confidence            87774       79999999996522 1       1123345889999999999988    5667789999999876432


Q ss_pred             CCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccc-cceeeccCCcccCCCCCHHHHHH
Q 016901          219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-HNITLSQEDTLFGGQVSNLQVAE  290 (380)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~-~~~~~~~~~~~~~~~i~~~DvA~  290 (380)
                            ......|+.+|.+.+.+.+       .+|+++++|+||++++|....... ............+.+.+++|+|+
T Consensus       153 ------~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~p~dvA~  226 (271)
T 3tzq_B          153 ------YDMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQPIVDIFATHHLAGRIGEPHEIAE  226 (271)
T ss_dssp             ------CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---CHHHHHHHHTTSTTSSCBCHHHHHH
T ss_pred             ------CCCChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCCHHHHHHHHhcCCCCCCcCHHHHHH
Confidence                  1334579999999998775       278999999999999985421100 00001111222345689999999


Q ss_pred             HHHHHHhCCC-CccCcEEEEecCCCCCcchHHHHHHh
Q 016901          291 LLACMAKNRS-LSYCKVVEVIAETTAPLTPMEELLAK  326 (380)
Q Consensus       291 ~i~~~l~~~~-~~~~~~~ni~~~~~~s~~~~~e~~~~  326 (380)
                      +++.++.+.. ...|+++++.+|.......+.+....
T Consensus       227 ~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~  263 (271)
T 3tzq_B          227 LVCFLASDRAAFITGQVIAADSGLLAHLPGLPQIRAS  263 (271)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTTTTBCTTHHHHHHH
T ss_pred             HHHHHhCcccCCcCCCEEEECCCccccCCCccccCCc
Confidence            9999997643 35789999998843333344444433

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.94  E-value=1.2e-25  Score=207.16  Aligned_cols=221  Identities=14%  Similarity=0.087  Sum_probs=162.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++|++|||||+|+||++++++|+++|++|++++|+.++.+++.+.+....        +    .++.++.+|++|.+++
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--------~----~~~~~~~~D~~~~~~~   72 (263)
T 3ai3_A            5 ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKF--------G----VRVLEVAVDVATPEGV   72 (263)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH--------C----CCEEEEECCTTSHHHH
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhc--------C----CceEEEEcCCCCHHHH
Confidence            467899999999999999999999999999999999887776655543210        1    5688999999999888


Q ss_pred             HHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCCCC
Q 016901          158 EPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~~~  220 (380)
                      +++++       ++|+||||||......      .++...+++|+.|+.++++++.    +.+.++||++||....... 
T Consensus        73 ~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-  151 (263)
T 3ai3_A           73 DAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPL-  151 (263)
T ss_dssp             HHHHHHHHHHHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCC-
Confidence            87774       7999999999653221      1223447899999988888764    4567899999998764321 


Q ss_pred             chhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcccccc----------cce--eeccCCcccCC
Q 016901          221 PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET----------HNI--TLSQEDTLFGG  281 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~~----------~~~--~~~~~~~~~~~  281 (380)
                           .....|+.+|.+.+.+.+.       +|+++++||||++++|.......          ...  .+.......+.
T Consensus       152 -----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~  226 (263)
T 3ai3_A          152 -----WYEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKR  226 (263)
T ss_dssp             -----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCTTCS
T ss_pred             -----CCcchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCCCCCC
Confidence                 2345799999999987652       68999999999999984321000          000  00000012345


Q ss_pred             CCCHHHHHHHHHHHHhCCC-CccCcEEEEecCCCCC
Q 016901          282 QVSNLQVAELLACMAKNRS-LSYCKVVEVIAETTAP  316 (380)
Q Consensus       282 ~i~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~~~s  316 (380)
                      +++++|+|++++.++.++. ...|++|++.+|...+
T Consensus       227 ~~~~~dvA~~~~~l~s~~~~~~~G~~~~vdgG~~~s  262 (263)
T 3ai3_A          227 FASPEELANFFVFLCSERATYSVGSAYFVDGGMLKT  262 (263)
T ss_dssp             CBCHHHHHHHHHHHTSTTCTTCCSCEEEESTTCCCC
T ss_pred             CcCHHHHHHHHHHHcCccccCCCCcEEEECCCcccc
Confidence            7899999999999997643 3468999999887554

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.94  E-value=8.6e-26  Score=207.26  Aligned_cols=219  Identities=16%  Similarity=0.143  Sum_probs=161.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++++||||||+|+||++++++|+++|++|++++|+.++.....+.++..+             .++.++.+|++|.+++
T Consensus        11 l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-------------~~~~~~~~D~~~~~~~   77 (260)
T 3awd_A           11 LDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEG-------------HDVSSVVMDVTNTESV   77 (260)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------------CCEEEEECCTTCHHHH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------------CceEEEEecCCCHHHH
Confidence            467899999999999999999999999999999999887766655554321             5789999999999988


Q ss_pred             HHHhc-------CCCEEEEccccCc-cccC------CCCCcchhhHHHHHHHHHHHHH----cCCCEEEEEccCCCCCCC
Q 016901          158 EPALG-------NASVVICCIGASE-KEVF------DITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~-~~~~------~~~~~~~~nv~g~~~ll~a~~~----~~v~r~V~~SS~~~~~~~  219 (380)
                      +++++       ++|+||||||... ....      ++...+++|+.|+.++++++..    .+.++||++||.......
T Consensus        78 ~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~  157 (260)
T 3awd_A           78 QNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVN  157 (260)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccC
Confidence            88774       7999999999653 1111      1233478999999999988753    467899999997653321


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcc-cccccce-eeccCCcccCCCCCHHHHHH
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDA-YKETHNI-TLSQEDTLFGGQVSNLQVAE  290 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~-~~~~~~~-~~~~~~~~~~~~i~~~DvA~  290 (380)
                       +   ..+...|+.+|.+.|.+++.       .|+++++||||++++|... ....... .........+.+++++|+|+
T Consensus       158 -~---~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  233 (260)
T 3awd_A          158 -R---PQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPMGRVGQPDEVAS  233 (260)
T ss_dssp             -S---SSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCHHHHHHHHHTCTTSSCBCHHHHHH
T ss_pred             -C---CCCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCChHHHHHHHhcCCcCCCCCHHHHHH
Confidence             1   11235799999999988752       6899999999999998643 1100000 00001112345789999999


Q ss_pred             HHHHHHhCCC-CccCcEEEEecCC
Q 016901          291 LLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       291 ~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      +++.++.+.. ...|++|++.++.
T Consensus       234 ~~~~l~~~~~~~~~G~~~~v~gg~  257 (260)
T 3awd_A          234 VVQFLASDAASLMTGAIVNVDAGF  257 (260)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHHHhCchhccCCCcEEEECCce
Confidence            9999997642 3468899998875

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.94  E-value=5.3e-26  Score=208.80  Aligned_cols=215  Identities=14%  Similarity=0.115  Sum_probs=153.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++|++|||||+|+||++++++|+++|++|++++|+.++.++..+.+                ..++.++.+|++|.+++
T Consensus         5 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----------------~~~~~~~~~Dv~~~~~v   68 (257)
T 3tpc_A            5 LKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL----------------GAAVRFRNADVTNEADA   68 (257)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC----------------------------CEEEECCTTCHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh----------------CCceEEEEccCCCHHHH
Confidence            46789999999999999999999999999999999987766544322                15788999999999888


Q ss_pred             HHHhc-------CCCEEEEccccCcccc----------CCCCCcchhhHHHHHHHHHHHHHc----------CCCEEEEE
Q 016901          158 EPALG-------NASVVICCIGASEKEV----------FDITGPYRIDFQATKNLVDAATIA----------KVNHFIMV  210 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~~~~----------~~~~~~~~~nv~g~~~ll~a~~~~----------~v~r~V~~  210 (380)
                      +++++       ++|+||||||......          .++...+++|+.|+.++++++...          +.++||++
T Consensus        69 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~i  148 (257)
T 3tpc_A           69 TAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNT  148 (257)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEE
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEE
Confidence            87774       8999999999653221          123345789999999999988643          45689999


Q ss_pred             ccCCCCCCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccce-eeccCCcccCCC
Q 016901          211 SSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNI-TLSQEDTLFGGQ  282 (380)
Q Consensus       211 SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~-~~~~~~~~~~~~  282 (380)
                      ||......      ......|+.+|.+.+.+.+       .+|+++++|+||++.++.......... .+.......+.+
T Consensus       149 sS~~~~~~------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~r~  222 (257)
T 3tpc_A          149 ASIAAFDG------QIGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQDVQDALAASVPFPPRL  222 (257)
T ss_dssp             CCTHHHHC------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC--------------CCSSSSCSC
T ss_pred             echhhccC------CCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCHHHHHHHHhcCCCCCCC
Confidence            99765321      1234579999999997765       278999999999999875321111111 111111122467


Q ss_pred             CCHHHHHHHHHHHHhCCCCccCcEEEEecCCCC
Q 016901          283 VSNLQVAELLACMAKNRSLSYCKVVEVIAETTA  315 (380)
Q Consensus       283 i~~~DvA~~i~~~l~~~~~~~~~~~ni~~~~~~  315 (380)
                      .+++|+|+++..++.+ ....|+++++.+|...
T Consensus       223 ~~~~dva~~v~~l~s~-~~itG~~i~vdGG~~~  254 (257)
T 3tpc_A          223 GRAEEYAALVKHICEN-TMLNGEVIRLDGALRM  254 (257)
T ss_dssp             BCHHHHHHHHHHHHHC-TTCCSCEEEESTTCCC
T ss_pred             CCHHHHHHHHHHHccc-CCcCCcEEEECCCccC
Confidence            8999999999999987 4467999999988654

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.94  E-value=7.1e-26  Score=206.23  Aligned_cols=217  Identities=12%  Similarity=0.080  Sum_probs=151.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-eCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAG-VRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l-~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      +++++||||||+|+||++++++|+++|++|+++ .|+++..+...+.++..+             .++.++.+|++|.++
T Consensus         3 l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~D~~~~~~   69 (247)
T 2hq1_A            3 LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAG-------------INVVVAKGDVKNPED   69 (247)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTT-------------CCEEEEESCTTSHHH
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcC-------------CcEEEEECCCCCHHH
Confidence            357899999999999999999999999999998 677766666555444321             578999999999998


Q ss_pred             HHHHhc-------CCCEEEEccccCcc------ccCCCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCCC
Q 016901          157 IEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       157 ~~~a~~-------~~d~Vi~~Ag~~~~------~~~~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~~  219 (380)
                      ++++++       ++|+||||||....      ...++...+++|+.|+.++++++.    +.+.++||++||...... 
T Consensus        70 ~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-  148 (247)
T 2hq1_A           70 VENMVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIG-  148 (247)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC-------
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccC-
Confidence            887774       79999999996532      122344558899999888887764    456789999999754221 


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHH
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELL  292 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i  292 (380)
                      .     .....|+.+|.+.|.+++.       .|+++++++||++.++...................+.+++++|+|+++
T Consensus       149 ~-----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  223 (247)
T 2hq1_A          149 N-----AGQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVLPDKVKEMYLNNIPLKRFGTPEEVANVV  223 (247)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHTTSTTSSCBCHHHHHHHH
T ss_pred             C-----CCCcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhcchHHHHHHHhhCCCCCCCCHHHHHHHH
Confidence            1     2345799999999987752       589999999999987632110000000001111234578999999999


Q ss_pred             HHHHhCCC-CccCcEEEEecCC
Q 016901          293 ACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       293 ~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      +.++.++. ...+++|++.++.
T Consensus       224 ~~l~~~~~~~~~G~~~~v~gG~  245 (247)
T 2hq1_A          224 GFLASDDSNYITGQVINIDGGL  245 (247)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHcCcccccccCcEEEeCCCc
Confidence            99987643 3468899998875

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.94  E-value=5e-26  Score=209.26  Aligned_cols=220  Identities=13%  Similarity=0.086  Sum_probs=162.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++|+||||||+|+||++++++|+++|++|++++|+.++.++..+.+...+             .++.++.+|++|.+++
T Consensus        12 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-------------~~~~~~~~D~~~~~~~   78 (260)
T 2zat_A           12 LENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEG-------------LSVTGTVCHVGKAEDR   78 (260)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------------CCEEEEECCTTCHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------------CceEEEEccCCCHHHH
Confidence            467899999999999999999999999999999999887766655554321             5688999999999888


Q ss_pred             HHHhc-------CCCEEEEccccCcc--c-----cCCCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCCC
Q 016901          158 EPALG-------NASVVICCIGASEK--E-----VFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~~--~-----~~~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~~  219 (380)
                      +++++       ++|+||||||....  .     ..++...+++|+.|+.++++++.    +.+.++||++||.......
T Consensus        79 ~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  158 (260)
T 2zat_A           79 ERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPF  158 (260)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCC
Confidence            77764       79999999996421  1     11233457899999988888764    5667899999998764321


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCccc--ccccceeeccCCcccCCCCCHHHHHH
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAY--KETHNITLSQEDTLFGGQVSNLQVAE  290 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~--~~~~~~~~~~~~~~~~~~i~~~DvA~  290 (380)
                            .....|+.+|.+.+.+.+.       .|+++++|+||++.++....  ...............+.+++++|+|+
T Consensus       159 ------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  232 (260)
T 2zat_A          159 ------PNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAG  232 (260)
T ss_dssp             ------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSSHHHHHHHHHHHTCSSCBCGGGGHH
T ss_pred             ------CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccChHHHHHHHhcCCCCCCCCHHHHHH
Confidence                  2345799999999988762       58999999999999875321  00000000001112345789999999


Q ss_pred             HHHHHHhCCC-CccCcEEEEecCCCCC
Q 016901          291 LLACMAKNRS-LSYCKVVEVIAETTAP  316 (380)
Q Consensus       291 ~i~~~l~~~~-~~~~~~~ni~~~~~~s  316 (380)
                      +++.++.++. ...|++|++.+|...+
T Consensus       233 ~v~~l~s~~~~~~tG~~~~vdgG~~~s  259 (260)
T 2zat_A          233 IVSFLCSEDASYITGETVVVGGGTASR  259 (260)
T ss_dssp             HHHHHTSGGGTTCCSCEEEESTTCCCC
T ss_pred             HHHHHcCcccCCccCCEEEECCCcccc
Confidence            9999987653 3468999999987654

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.94  E-value=3.2e-25  Score=206.26  Aligned_cols=222  Identities=16%  Similarity=0.134  Sum_probs=161.8

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC------------chhHHHHHHHHHhhhhcccccccCCCCCC
Q 016901           75 ADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS------------VQRAENLVQSVKQMKLDGELANKGIQPVE  142 (380)
Q Consensus        75 ~~~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (380)
                      |..+++|++|||||+|+||++++++|+++|++|++++|+            .+...+..+.+...+             .
T Consensus         5 m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~   71 (281)
T 3s55_A            5 MADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTG-------------R   71 (281)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTT-------------C
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcC-------------C
Confidence            445678999999999999999999999999999999997            334444443333321             6


Q ss_pred             ceEEEEcCCCChhcHHHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHH----HHcCCC
Q 016901          143 MLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKVN  205 (380)
Q Consensus       143 ~v~~~~~Dl~d~~~~~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~----~~~~v~  205 (380)
                      ++.++.+|++|.++++++++       ++|+||||||......      .++...+++|+.|+.++++++    ++.+.+
T Consensus        72 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g  151 (281)
T 3s55_A           72 RCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYG  151 (281)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE
T ss_pred             eEEEEeCCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC
Confidence            78999999999988887764       7999999999654221      123344789999999999885    445667


Q ss_pred             EEEEEccCCCCCCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccccc---cc-----ce
Q 016901          206 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE---TH-----NI  270 (380)
Q Consensus       206 r~V~~SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~---~~-----~~  270 (380)
                      +||++||.......      .....|+.+|.+.+.+.+       .+|+++++|+||++++|......   ..     ..
T Consensus       152 ~iv~isS~~~~~~~------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~  225 (281)
T 3s55_A          152 RIVTVSSMLGHSAN------FAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKP  225 (281)
T ss_dssp             EEEEECCGGGGSCC------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------C
T ss_pred             EEEEECChhhcCCC------CCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhcccccccccc
Confidence            99999997664321      234579999999998775       26899999999999998542100   00     00


Q ss_pred             e-------eccCCcccCCCCCHHHHHHHHHHHHhCCC-CccCcEEEEecCCCC
Q 016901          271 T-------LSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAETTA  315 (380)
Q Consensus       271 ~-------~~~~~~~~~~~i~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~~~  315 (380)
                      .       +.......+.+.+++|+|++++.++.+.. ...|++|++.+|...
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~  278 (281)
T 3s55_A          226 TLKDVESVFASLHLQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGATA  278 (281)
T ss_dssp             CHHHHHHHHHHHCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             chhHHHHHHHhhhccCcCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCccc
Confidence            0       00111122567899999999999998653 346899999988644

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.94  E-value=3e-26  Score=208.73  Aligned_cols=218  Identities=16%  Similarity=0.098  Sum_probs=158.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++++|+||||+|+||++++++|+++|++|++++|+.++.+.+.+.+....            ..++.++.+|++|.+++
T Consensus         5 ~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------------~~~~~~~~~D~~~~~~~   72 (248)
T 2pnf_A            5 LQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKY------------GVKAHGVEMNLLSEESI   72 (248)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH------------CCCEEEEECCTTCHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhc------------CCceEEEEccCCCHHHH
Confidence            467899999999999999999999999999999999887766655443210            14688999999999988


Q ss_pred             HHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCCCC
Q 016901          158 EPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~~~  220 (380)
                      +++++       ++|+||||||......      .++...+++|+.|+.++++++    ++.+.++||++||......  
T Consensus        73 ~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~--  150 (248)
T 2pnf_A           73 NKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTG--  150 (248)
T ss_dssp             HHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHC--
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCC--
Confidence            88875       8999999999653221      123345789999997666554    5567789999999643211  


Q ss_pred             chhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHH
Q 016901          221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA  293 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~  293 (380)
                          ......|+.+|.+.+.+++       ..|++++++|||++++|...................+.+++++|+|++++
T Consensus       151 ----~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  226 (248)
T 2pnf_A          151 ----NVGQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLSEEIKQKYKEQIPLGRFGSPEEVANVVL  226 (248)
T ss_dssp             ----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHTCTTSSCBCHHHHHHHHH
T ss_pred             ----CCCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhccHHHHHHHHhcCCCCCccCHHHHHHHHH
Confidence                1233579999999987765       25899999999999988532111000000001112345789999999999


Q ss_pred             HHHhCC-CCccCcEEEEecCC
Q 016901          294 CMAKNR-SLSYCKVVEVIAET  313 (380)
Q Consensus       294 ~~l~~~-~~~~~~~~ni~~~~  313 (380)
                      .++.+. ....|++|++.++.
T Consensus       227 ~l~~~~~~~~~G~~~~v~gg~  247 (248)
T 2pnf_A          227 FLCSELASYITGEVIHVNGGM  247 (248)
T ss_dssp             HHHSGGGTTCCSCEEEESTTC
T ss_pred             HHhCchhhcCCCcEEEeCCCc
Confidence            999764 23458899988764

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.94  E-value=5.1e-27  Score=214.31  Aligned_cols=209  Identities=15%  Similarity=0.163  Sum_probs=154.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      |+||||||+||||++++++|+++|++|++++|++++..                       .   .+.+|++|.++++++
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----------------------~---~~~~D~~~~~~~~~~   55 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIE-----------------------A---DLSTPGGRETAVAAV   55 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE-----------------------C---CTTSHHHHHHHHHHH
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHcc-----------------------c---cccCCcccHHHHHHH
Confidence            58999999999999999999999999999999865321                       1   156899999888888


Q ss_pred             hc----CCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHc----CCCEEEEEccCCCCCCCCch----------
Q 016901          161 LG----NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA----KVNHFIMVSSLGTNKFGFPA----------  222 (380)
Q Consensus       161 ~~----~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~----~v~r~V~~SS~~~~~~~~~~----------  222 (380)
                      ++    ++|+||||||.... ..++...+++|+.|+.++++++.+.    +.++||++||..+.......          
T Consensus        56 ~~~~~~~~d~vi~~Ag~~~~-~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~  134 (255)
T 2dkn_A           56 LDRCGGVLDGLVCCAGVGVT-AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAG  134 (255)
T ss_dssp             HHHHTTCCSEEEECCCCCTT-SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHT
T ss_pred             HHHcCCCccEEEECCCCCCc-chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhccc
Confidence            85    89999999996541 2334556889999999999987653    56899999998775332100          


Q ss_pred             ----------hhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcccc--ccc-ceeecc-CCcccCC
Q 016901          223 ----------AILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK--ETH-NITLSQ-EDTLFGG  281 (380)
Q Consensus       223 ----------~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~--~~~-~~~~~~-~~~~~~~  281 (380)
                                ....+...|+.+|+++|.+++.       .|+++++||||+++||.....  ... ...... .. ..+.
T Consensus       135 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~  213 (255)
T 2dkn_A          135 DEARAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRYGESTRRFVA-PLGR  213 (255)
T ss_dssp             CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCTTTHHHHHSCCC-TTSS
T ss_pred             chhhhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccchhhHHHHHHHHH-HhcC
Confidence                      0013556899999999988763       699999999999999853211  000 000000 01 3346


Q ss_pred             CCCHHHHHHHHHHHHhCCC-CccCcEEEEecCCCCCc
Q 016901          282 QVSNLQVAELLACMAKNRS-LSYCKVVEVIAETTAPL  317 (380)
Q Consensus       282 ~i~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~~~s~  317 (380)
                      +++++|+|++++.++.++. ...+++|++.++...++
T Consensus       214 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~  250 (255)
T 2dkn_A          214 GSEPREVAEAIAFLLGPQASFIHGSVLFVDGGMDALM  250 (255)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHHHH
T ss_pred             CCCHHHHHHHHHHHhCCCcccceeeEEEecCCeEeee
Confidence            8999999999999998753 24588999998864433

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.94  E-value=5.5e-25  Score=202.07  Aligned_cols=222  Identities=13%  Similarity=0.086  Sum_probs=164.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .+++|++|||||+|+||++++++|+++|++|++++|+.++.++..+.+...             ..++.++.+|++|.++
T Consensus         3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~Dv~~~~~   69 (257)
T 3imf_A            3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQF-------------PGQILTVQMDVRNTDD   69 (257)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCS-------------TTCEEEEECCTTCHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-------------CCcEEEEEccCCCHHH
Confidence            356789999999999999999999999999999999998887776655432             1578999999999988


Q ss_pred             HHHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHH-----HHcCCCEEEEEccCCCCCC
Q 016901          157 IEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA-----TIAKVNHFIMVSSLGTNKF  218 (380)
Q Consensus       157 ~~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~-----~~~~v~r~V~~SS~~~~~~  218 (380)
                      ++++++       ++|+||||||......      .++...+++|+.|+.++++++     ++.+.++||++||......
T Consensus        70 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  149 (257)
T 3imf_A           70 IQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDA  149 (257)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccC
Confidence            887763       7999999999643221      123345889999999999887     3344679999999765332


Q ss_pred             CCchhhhchhhHHHHHHHHHHHHHH--------HCCCCEEEEecCcccCCCccccc---ccceeeccCCcccCCCCCHHH
Q 016901          219 GFPAAILNLFWGVLLWKRKAEEALI--------ASGLPYTIVRPGGMERPTDAYKE---THNITLSQEDTLFGGQVSNLQ  287 (380)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~--------~~g~~~~ivRpg~v~gp~~~~~~---~~~~~~~~~~~~~~~~i~~~D  287 (380)
                      .      .....|+.+|.+.+.+.+        ..|+++++|+||++.++......   .............+.+.+++|
T Consensus       150 ~------~~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~ped  223 (257)
T 3imf_A          150 G------PGVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPLGRLGTPEE  223 (257)
T ss_dssp             C------TTCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTSTTCSCBCHHH
T ss_pred             C------CCcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcCCCCCCcCHHH
Confidence            1      234579999999887654        35999999999999988532110   000000011122345789999


Q ss_pred             HHHHHHHHHhCCC-CccCcEEEEecCCCCCc
Q 016901          288 VAELLACMAKNRS-LSYCKVVEVIAETTAPL  317 (380)
Q Consensus       288 vA~~i~~~l~~~~-~~~~~~~ni~~~~~~s~  317 (380)
                      +|++++.++.+.. ...|+++++.+|...+.
T Consensus       224 vA~~v~~L~s~~~~~itG~~i~vdGG~~~~~  254 (257)
T 3imf_A          224 IAGLAYYLCSDEAAYINGTCMTMDGGQHLHQ  254 (257)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTTTSCC
T ss_pred             HHHHHHHHcCchhcCccCCEEEECCCcccCC
Confidence            9999999997653 35789999999876543

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.94  E-value=5.8e-25  Score=202.30  Aligned_cols=210  Identities=18%  Similarity=0.187  Sum_probs=157.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++++||||||+|+||++++++|+++|++|++++|+.++.+++.+.+.                .++.++.+|++|.+++
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------------~~~~~~~~D~~~~~~v   68 (260)
T 1nff_A            5 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA----------------DAARYVHLDVTQPAQW   68 (260)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG----------------GGEEEEECCTTCHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh----------------cCceEEEecCCCHHHH
Confidence            467899999999999999999999999999999999877665543221                3588899999999988


Q ss_pred             HHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHH----HHHcCCCEEEEEccCCCCCCCC
Q 016901          158 EPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDA----ATIAKVNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a----~~~~~v~r~V~~SS~~~~~~~~  220 (380)
                      +++++       ++|+||||||......      .++...+++|+.|+.+++++    +++.+.++||++||....... 
T Consensus        69 ~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-  147 (260)
T 1nff_A           69 KAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGT-  147 (260)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCC-
Confidence            88775       8999999999653221      12334578999999665554    455677899999998764321 


Q ss_pred             chhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHH
Q 016901          221 PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA  293 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~  293 (380)
                           .....|+.+|.+.+.+.+.       .|+++++||||++++|...... ..+  .  ....+.+++++|+|++++
T Consensus       148 -----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~--~--~~~~~~~~~~~dvA~~v~  217 (260)
T 1nff_A          148 -----VACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVP-EDI--F--QTALGRAAEPVEVSNLVV  217 (260)
T ss_dssp             -----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSC-TTC--S--CCSSSSCBCHHHHHHHHH
T ss_pred             -----CCchhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccccch-hhH--H--hCccCCCCCHHHHHHHHH
Confidence                 2335799999999987652       6999999999999988542111 000  0  112345789999999999


Q ss_pred             HHHhCCC-CccCcEEEEecCCC
Q 016901          294 CMAKNRS-LSYCKVVEVIAETT  314 (380)
Q Consensus       294 ~~l~~~~-~~~~~~~ni~~~~~  314 (380)
                      .++.+.. ...|++|++.++..
T Consensus       218 ~l~s~~~~~~~G~~~~v~gG~~  239 (260)
T 1nff_A          218 YLASDESSYSTGAEFVVDGGTV  239 (260)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHhCccccCCcCCEEEECCCee
Confidence            9997643 24588999988853

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.94  E-value=2.5e-25  Score=205.06  Aligned_cols=217  Identities=15%  Similarity=0.130  Sum_probs=148.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++|+||||||+|+||++++++|+++|++|++++|+.++.+...+.+...+             .++.++.+|++|.+++
T Consensus        12 l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~D~~~~~~~   78 (266)
T 1xq1_A           12 LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKG-------------FQVTGSVCDASLRPER   78 (266)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------------CCEEEEECCTTSHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------------CeeEEEECCCCCHHHH
Confidence            467899999999999999999999999999999999887776655554321             5688999999999888


Q ss_pred             HHHh--------cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCCC
Q 016901          158 EPAL--------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       158 ~~a~--------~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~~  219 (380)
                      ++++        +++|+||||||......      .++...+++|+.|+.++++++    ++.+.++||++||...... 
T Consensus        79 ~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-  157 (266)
T 1xq1_A           79 EKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVS-  157 (266)
T ss_dssp             HHHHHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC--------
T ss_pred             HHHHHHHHHHhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccC-
Confidence            8776        57999999999653221      122334789999999999888    4567789999999766331 


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcccccccce-eeccCCcccCCCCCHHHHHHH
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNI-TLSQEDTLFGGQVSNLQVAEL  291 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~~~~~-~~~~~~~~~~~~i~~~DvA~~  291 (380)
                           ......|+.+|.+.+.+++.       .|+++++||||++++|.......... .........+.+++++|+|++
T Consensus       158 -----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  232 (266)
T 1xq1_A          158 -----ASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSL  232 (266)
T ss_dssp             --------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-------------------------CCGGGGHHH
T ss_pred             -----CCCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcCHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence                 12335799999999987752       59999999999999985321110000 000011122357899999999


Q ss_pred             HHHHHhCCC-CccCcEEEEecCC
Q 016901          292 LACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       292 i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      ++.++.++. ...|++|++.++.
T Consensus       233 ~~~l~~~~~~~~~G~~~~v~gG~  255 (266)
T 1xq1_A          233 VAFLCMPAASYITGQTICVDGGL  255 (266)
T ss_dssp             HHHHTSGGGTTCCSCEEECCCCE
T ss_pred             HHHHcCccccCccCcEEEEcCCc
Confidence            999987542 3468899998885

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.94  E-value=1.6e-25  Score=204.25  Aligned_cols=215  Identities=14%  Similarity=0.100  Sum_probs=157.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHH-HhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSV-KQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      +|+++||||+|+||++++++|+++|++|++++|+.++.+++.+.+ ...             ..++.++.+|++|.++++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~~~   68 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAY-------------ADKVLRVRADVADEGDVN   68 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTT-------------GGGEEEEECCTTCHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-------------CCcEEEEEecCCCHHHHH
Confidence            578999999999999999999999999999999988776655443 211             156899999999999888


Q ss_pred             HHhc-------CCCEEEEccccCcccc---------CCCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCC
Q 016901          159 PALG-------NASVVICCIGASEKEV---------FDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKF  218 (380)
Q Consensus       159 ~a~~-------~~d~Vi~~Ag~~~~~~---------~~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~  218 (380)
                      ++++       ++|+||||||......         .++...+++|+.++.++++++    ++.+.++||++||......
T Consensus        69 ~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~  148 (250)
T 2cfc_A           69 AAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVA  148 (250)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC
T ss_pred             HHHHHHHHHhCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccC
Confidence            8774       7999999999653221         122344789999987766655    4557789999999766432


Q ss_pred             CCchhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCccc-ccccce-eeccCCcccCCCCCHHHHH
Q 016901          219 GFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAY-KETHNI-TLSQEDTLFGGQVSNLQVA  289 (380)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~-~~~~~~-~~~~~~~~~~~~i~~~DvA  289 (380)
                      .      .....|+.+|.+.+.+++.       .|+++++||||++++|.... ...... .........+.+.+++|+|
T Consensus       149 ~------~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  222 (250)
T 2cfc_A          149 F------PGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQKEIGTAAQVA  222 (250)
T ss_dssp             C------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSHHHHHHHHTTCTTCSCBCHHHHH
T ss_pred             C------CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCHHHHHHHHhcCCCCCCcCHHHHH
Confidence            1      2345799999999987752       49999999999999986432 110000 0000111234578999999


Q ss_pred             HHHHHHHhCCC-CccCcEEEEecCC
Q 016901          290 ELLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       290 ~~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      ++++.++.++. ...|+++++.+|.
T Consensus       223 ~~~~~l~~~~~~~~~G~~~~v~gG~  247 (250)
T 2cfc_A          223 DAVMFLAGEDATYVNGAALVMDGAY  247 (250)
T ss_dssp             HHHHHHHSTTCTTCCSCEEEESTTG
T ss_pred             HHHHHHcCchhhcccCCEEEECCce
Confidence            99999998653 3458899988774

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.94  E-value=1e-25  Score=206.89  Aligned_cols=221  Identities=15%  Similarity=0.140  Sum_probs=166.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .++++++|||||+|+||++++++|+++|++|++++|+.++.+++.+.+...+             .++.++.+|++|.++
T Consensus         9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~Dv~d~~~   75 (256)
T 3gaf_A            9 HLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAG-------------GKAIGLECNVTDEQH   75 (256)
T ss_dssp             CCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTT-------------CCEEEEECCTTCHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------------CcEEEEECCCCCHHH
Confidence            3477899999999999999999999999999999999988887777665432             678999999999988


Q ss_pred             HHHHhc-------CCCEEEEccccCcccc-----CCCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCCCC
Q 016901          157 IEPALG-------NASVVICCIGASEKEV-----FDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       157 ~~~a~~-------~~d~Vi~~Ag~~~~~~-----~~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~~~  220 (380)
                      ++++++       ++|+||||||......     .++...+++|+.|+.++++++    ++.+.++||++||....... 
T Consensus        76 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-  154 (256)
T 3gaf_A           76 REAVIKAALDQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTN-  154 (256)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCC-
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCC-
Confidence            887764       7999999999654322     123344789999999999886    35566799999998764321 


Q ss_pred             chhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccccc-ccceeeccCCcccCCCCCHHHHHHHH
Q 016901          221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE-THNITLSQEDTLFGGQVSNLQVAELL  292 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~-~~~~~~~~~~~~~~~~i~~~DvA~~i  292 (380)
                           .....|+.+|.+.+.+.+       ..|++++.|+||++.++...... .............+.+.+++|+|+++
T Consensus       155 -----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~  229 (256)
T 3gaf_A          155 -----VRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPEIERAMLKHTPLGRLGEAQDIANAA  229 (256)
T ss_dssp             -----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCCHHHHHHHHTTCTTSSCBCHHHHHHHH
T ss_pred             -----CCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence                 234579999999998875       26899999999999887421100 00000011122334678999999999


Q ss_pred             HHHHhCCC-CccCcEEEEecCCCCC
Q 016901          293 ACMAKNRS-LSYCKVVEVIAETTAP  316 (380)
Q Consensus       293 ~~~l~~~~-~~~~~~~ni~~~~~~s  316 (380)
                      +.++.+.. ...|++|++.+|...+
T Consensus       230 ~~L~s~~~~~itG~~i~vdgG~~~~  254 (256)
T 3gaf_A          230 LFLCSPAAAWISGQVLTVSGGGVQE  254 (256)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTSCCC
T ss_pred             HHHcCCcccCccCCEEEECCCcccc
Confidence            99997543 3569999999987654

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.94  E-value=2.1e-26  Score=216.21  Aligned_cols=234  Identities=13%  Similarity=0.130  Sum_probs=169.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .+++++|+||||+|+||++++++|+++|++|++++|+.++.....+.+....            ..++.++.+|++|.++
T Consensus        23 ~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~------------~~~~~~~~~Dl~~~~~   90 (302)
T 1w6u_A           23 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT------------GNKVHAIQCDVRDPDM   90 (302)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH------------SSCEEEEECCTTCHHH
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc------------CCceEEEEeCCCCHHH
Confidence            3467899999999999999999999999999999999887776665554320            1578999999999988


Q ss_pred             HHHHhc-------CCCEEEEccccCccc------cCCCCCcchhhHHHHHHHHHHHHH-----cCCCEEEEEccCCCCCC
Q 016901          157 IEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATI-----AKVNHFIMVSSLGTNKF  218 (380)
Q Consensus       157 ~~~a~~-------~~d~Vi~~Ag~~~~~------~~~~~~~~~~nv~g~~~ll~a~~~-----~~v~r~V~~SS~~~~~~  218 (380)
                      ++++++       .+|+||||||.....      ..++...+++|+.|+.++++++..     .+.++||++||..+...
T Consensus        91 ~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~  170 (302)
T 1w6u_A           91 VQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETG  170 (302)
T ss_dssp             HHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccC
Confidence            887763       579999999964321      112334578999999999887753     34579999999755221


Q ss_pred             CCchhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCccc--ccccce--eeccCCcccCCCCCHHH
Q 016901          219 GFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAY--KETHNI--TLSQEDTLFGGQVSNLQ  287 (380)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~--~~~~~~--~~~~~~~~~~~~i~~~D  287 (380)
                            ..+...|+.+|.+.|.+++.       .|+++++||||+++++....  ......  .+. .....+.+++++|
T Consensus       171 ------~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~d  243 (302)
T 1w6u_A          171 ------SGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMI-GRIPCGRLGTVEE  243 (302)
T ss_dssp             ------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHH-TTCTTSSCBCHHH
T ss_pred             ------CCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHH-hcCCcCCCCCHHH
Confidence                  13345799999999988752       68999999999999873211  110000  011 1112345789999


Q ss_pred             HHHHHHHHHhCCC-CccCcEEEEecCCCCCcchHHHHHHhcCC
Q 016901          288 VAELLACMAKNRS-LSYCKVVEVIAETTAPLTPMEELLAKIPS  329 (380)
Q Consensus       288 vA~~i~~~l~~~~-~~~~~~~ni~~~~~~s~~~~~e~~~~~~~  329 (380)
                      +|++++.++.+.. ...|++|++.++...+..++++.+.++.+
T Consensus       244 va~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~~~~~~~~~g  286 (302)
T 1w6u_A          244 LANLAAFLCSDYASWINGAVIKFDGGEEVLISGEFNDLRKVTK  286 (302)
T ss_dssp             HHHHHHHHTSGGGTTCCSCEEEESTTHHHHHHSTTGGGGGCCH
T ss_pred             HHHHHHHHcCCcccccCCCEEEECCCeeeccCCccccchhhcc
Confidence            9999999987543 23688999999987666677666666654

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.94  E-value=4.6e-25  Score=200.56  Aligned_cols=213  Identities=16%  Similarity=0.128  Sum_probs=157.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +.+++|+||||+|+||++++++|+++|++|++++|+.++.+.+.+.+                 .+++++.+|++|.+++
T Consensus         5 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----------------~~~~~~~~D~~~~~~~   67 (244)
T 3d3w_A            5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC-----------------PGIEPVCVDLGDWEAT   67 (244)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS-----------------TTCEEEECCTTCHHHH
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----------------CCCCEEEEeCCCHHHH
Confidence            46789999999999999999999999999999999987665543311                 3567789999999999


Q ss_pred             HHHhc---CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHHH----cC-CCEEEEEccCCCCCCCCchh
Q 016901          158 EPALG---NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATI----AK-VNHFIMVSSLGTNKFGFPAA  223 (380)
Q Consensus       158 ~~a~~---~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~~----~~-v~r~V~~SS~~~~~~~~~~~  223 (380)
                      +++++   ++|+||||||......      .++...+++|+.++.++++++..    .+ .++||++||.......    
T Consensus        68 ~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----  143 (244)
T 3d3w_A           68 ERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAV----  143 (244)
T ss_dssp             HHHHTTCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC----
T ss_pred             HHHHHHcCCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCC----
Confidence            99885   5899999999653221      12334578999999988887754    35 6799999998664321    


Q ss_pred             hhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcccc--cccceeeccCCcccCCCCCHHHHHHHHHH
Q 016901          224 ILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK--ETHNITLSQEDTLFGGQVSNLQVAELLAC  294 (380)
Q Consensus       224 ~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~--~~~~~~~~~~~~~~~~~i~~~DvA~~i~~  294 (380)
                        .....|+.+|.++|.+++.       .|+++++||||+++++.....  ..............+.+++++|+|++++.
T Consensus       144 --~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  221 (244)
T 3d3w_A          144 --TNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILF  221 (244)
T ss_dssp             --TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHHHHHHTCTTCSCBCHHHHHHHHHH
T ss_pred             --CCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHHHHHHHhhCCCCCCcCHHHHHHHHHH
Confidence              2345799999999988752       589999999999999854211  00000000011123467999999999999


Q ss_pred             HHhCCC-CccCcEEEEecCC
Q 016901          295 MAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       295 ~l~~~~-~~~~~~~ni~~~~  313 (380)
                      ++.+.. ...|++|++.++.
T Consensus       222 l~~~~~~~~~G~~~~v~gG~  241 (244)
T 3d3w_A          222 LLSDRSGMTTGSTLPVEGGF  241 (244)
T ss_dssp             HHSGGGTTCCSCEEEESTTG
T ss_pred             HcCccccCCCCCEEEECCCc
Confidence            997643 3468899998874

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.94  E-value=1.3e-25  Score=206.49  Aligned_cols=227  Identities=19%  Similarity=0.113  Sum_probs=155.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++++|+||||+|+||++++++|+++|++|++++|+.++.+++.+.+...+..      ......++.++.+|++|.+++
T Consensus         5 ~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~D~~~~~~~   78 (264)
T 2pd6_A            5 LRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSK------EGPPRGNHAAFQADVSEARAA   78 (264)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------------CCEEEECCTTSHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCcc------ccccCcceEEEEecCCCHHHH
Confidence            46789999999999999999999999999999999988766654433211100      000014688999999999888


Q ss_pred             HHHhc-------CC-CEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHHHc----C-CCEEEEEccCCCCCC
Q 016901          158 EPALG-------NA-SVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIA----K-VNHFIMVSSLGTNKF  218 (380)
Q Consensus       158 ~~a~~-------~~-d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~~~----~-v~r~V~~SS~~~~~~  218 (380)
                      +++++       ++ |+||||||......      .++...+++|+.|+.++++++...    + .++||++||......
T Consensus        79 ~~~~~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~  158 (264)
T 2pd6_A           79 RCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVG  158 (264)
T ss_dssp             HHHHHHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHC
T ss_pred             HHHHHHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccC
Confidence            87764       45 99999999653221      123345789999999999987543    4 569999999754211


Q ss_pred             CCchhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHH
Q 016901          219 GFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAEL  291 (380)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~  291 (380)
                            ......|+.+|.+++.+++.       .|+++++||||++++|...................+.+++++|+|++
T Consensus       159 ------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  232 (264)
T 2pd6_A          159 ------NVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQKVVDKITEMIPMGHLGDPEDVADV  232 (264)
T ss_dssp             ------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC----------CTGGGCTTCSCBCHHHHHHH
T ss_pred             ------CCCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcCHHHHHHHHHhCCCCCCCCHHHHHHH
Confidence                  12345799999999877652       68999999999999985421111000000011122457899999999


Q ss_pred             HHHHHhCC-CCccCcEEEEecCCCCC
Q 016901          292 LACMAKNR-SLSYCKVVEVIAETTAP  316 (380)
Q Consensus       292 i~~~l~~~-~~~~~~~~ni~~~~~~s  316 (380)
                      ++.++.++ ....|+.+++.++...+
T Consensus       233 ~~~l~~~~~~~~~G~~~~v~gg~~~~  258 (264)
T 2pd6_A          233 VAFLASEDSGYITGTSVEVTGGLFMA  258 (264)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTC---
T ss_pred             HHHHcCCcccCCCCCEEEECCCceec
Confidence            99998764 23568899999887553

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.94  E-value=1.8e-25  Score=204.14  Aligned_cols=216  Identities=17%  Similarity=0.163  Sum_probs=156.4

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ...+++||||||+|+||+++++.|+++|++|++++|+.++.+.+.+.+.                .++.++.+|++|.++
T Consensus        11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------------~~~~~~~~D~~~~~~   74 (249)
T 3f9i_A           11 DLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK----------------DNYTIEVCNLANKEE   74 (249)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC----------------SSEEEEECCTTSHHH
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc----------------cCccEEEcCCCCHHH
Confidence            4578999999999999999999999999999999999888776655332                578899999999999


Q ss_pred             HHHHhc---CCCEEEEccccCccc------cCCCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCCCCchh
Q 016901          157 IEPALG---NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFPAA  223 (380)
Q Consensus       157 ~~~a~~---~~d~Vi~~Ag~~~~~------~~~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~~~~~~  223 (380)
                      +.++++   ++|+||||||.....      ..++...+++|+.|+.++++++.    +.+.++||++||.......    
T Consensus        75 ~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----  150 (249)
T 3f9i_A           75 CSNLISKTSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGN----  150 (249)
T ss_dssp             HHHHHHTCSCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CC----
T ss_pred             HHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCC----
Confidence            988885   689999999965321      22334558899999999888763    4556799999998764321    


Q ss_pred             hhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHHHH
Q 016901          224 ILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMA  296 (380)
Q Consensus       224 ~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l  296 (380)
                        .....|+.+|.+.+.+++       ..|+++++|+||++.++...................+.+.+++|+|++++.++
T Consensus       151 --~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  228 (249)
T 3f9i_A          151 --PGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNEKQREAIVQKIPLGTYGIPEDVAYAVAFLA  228 (249)
T ss_dssp             --SCSHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CCHHHHHHHHHHCTTCSCBCHHHHHHHHHHHH
T ss_pred             --CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHc
Confidence              234579999999987765       26899999999999887432111000000011122346789999999999999


Q ss_pred             hCCC-CccCcEEEEecCCC
Q 016901          297 KNRS-LSYCKVVEVIAETT  314 (380)
Q Consensus       297 ~~~~-~~~~~~~ni~~~~~  314 (380)
                      .+.. ...|++|++.+|..
T Consensus       229 s~~~~~~tG~~~~vdgG~~  247 (249)
T 3f9i_A          229 SNNASYITGQTLHVNGGML  247 (249)
T ss_dssp             SGGGTTCCSCEEEESTTSS
T ss_pred             CCccCCccCcEEEECCCEe
Confidence            8653 34689999988753

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.93  E-value=2e-25  Score=204.66  Aligned_cols=216  Identities=13%  Similarity=0.022  Sum_probs=157.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++|+||||||+|+||++++++|+++|++|++++|+.++.+++.+.+   +             .++.++.+|++|.+++
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~-------------~~~~~~~~D~~~~~~~   66 (254)
T 1hdc_A            3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---G-------------DAARYQHLDVTIEEDW   66 (254)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---G-------------GGEEEEECCTTCHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---C-------------CceeEEEecCCCHHHH
Confidence            46789999999999999999999999999999999987766544321   1             4688999999999888


Q ss_pred             HHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHH----HHHHHHcCCCEEEEEccCCCCCCCC
Q 016901          158 EPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNL----VDAATIAKVNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~l----l~a~~~~~v~r~V~~SS~~~~~~~~  220 (380)
                      +++++       ++|+||||||......      .++...+++|+.|+.++    ++.+++.+.++||++||....... 
T Consensus        67 ~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-  145 (254)
T 1hdc_A           67 QRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGL-  145 (254)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCC-
Confidence            87774       8999999999653211      12334578999998754    455566677899999998664321 


Q ss_pred             chhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCC-CHHHHHHHH
Q 016901          221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQV-SNLQVAELL  292 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i-~~~DvA~~i  292 (380)
                           .....|+.+|.+.+.+.+       ..|+++++|+||++++|...................+.+. +++|+|+++
T Consensus       146 -----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~~dvA~~v  220 (254)
T 1hdc_A          146 -----ALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAV  220 (254)
T ss_dssp             -----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCSTTSCTTSTTSSCB-CHHHHHHHH
T ss_pred             -----CCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccccccchhHHHHHHhcCCCCCCCCCHHHHHHHH
Confidence                 234579999999997765       2689999999999998742211000000000111223467 999999999


Q ss_pred             HHHHhCCC-CccCcEEEEecCCCC
Q 016901          293 ACMAKNRS-LSYCKVVEVIAETTA  315 (380)
Q Consensus       293 ~~~l~~~~-~~~~~~~ni~~~~~~  315 (380)
                      +.++.++. ...|+++++.++...
T Consensus       221 ~~l~s~~~~~~tG~~~~vdgG~~~  244 (254)
T 1hdc_A          221 VKLLSDTSSYVTGAELAVDGGWTT  244 (254)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTTTT
T ss_pred             HHHhCchhcCCCCCEEEECCCccc
Confidence            99997643 356899999888643

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.93  E-value=3.8e-25  Score=201.75  Aligned_cols=217  Identities=12%  Similarity=0.084  Sum_probs=157.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-CchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVR-SVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      +++|+++||||+|+||++++++|+++|++|++++| +.++.+++.+.++..+             .++.++.+|++|.++
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-------------~~~~~~~~D~~~~~~   68 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLG-------------SDAIAVRADVANAED   68 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-------------CCEEEEECCTTCHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC-------------CcEEEEEcCCCCHHH
Confidence            35789999999999999999999999999999999 7777666655554321             568899999999988


Q ss_pred             HHHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCCC
Q 016901          157 IEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       157 ~~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~~  219 (380)
                      ++++++       ++|+||||||......      .++...+++|+.|+.++++++    ++.+.++||++||...... 
T Consensus        69 ~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-  147 (246)
T 2uvd_A           69 VTNMVKQTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTG-  147 (246)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC-
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCC-
Confidence            887764       7999999999653221      123345789999977666654    4567789999999754221 


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHH
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELL  292 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i  292 (380)
                           ......|+.+|.+.+.+.+       ..|+++++|+||++.++...................+.+++++|+|+++
T Consensus       148 -----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~  222 (246)
T 2uvd_A          148 -----NPGQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLDENIKAEMLKLIPAAQFGEAQDIANAV  222 (246)
T ss_dssp             -----CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCCTTHHHHHHHTCTTCSCBCHHHHHHHH
T ss_pred             -----CCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence                 1234579999999887754       3689999999999987642111000000000011224578999999999


Q ss_pred             HHHHhCCC-CccCcEEEEecCC
Q 016901          293 ACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       293 ~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      +.++.++. ...|+++++.+|.
T Consensus       223 ~~l~s~~~~~~tG~~~~vdgG~  244 (246)
T 2uvd_A          223 TFFASDQSKYITGQTLNVDGGM  244 (246)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTS
T ss_pred             HHHcCchhcCCCCCEEEECcCc
Confidence            99997643 3468899988874

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.93  E-value=2.5e-25  Score=202.22  Aligned_cols=213  Identities=16%  Similarity=0.067  Sum_probs=157.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++|+||||||+|+||++++++|+++|++|++++|+.++.+++.+..                 .+++++.+|++|.+++
T Consensus         5 ~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----------------~~~~~~~~D~~~~~~~   67 (244)
T 1cyd_A            5 FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC-----------------PGIEPVCVDLGDWDAT   67 (244)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS-----------------TTCEEEECCTTCHHHH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----------------cCCCcEEecCCCHHHH
Confidence            46789999999999999999999999999999999987665543210                 3567889999999999


Q ss_pred             HHHhc---CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHHH----cC-CCEEEEEccCCCCCCCCchh
Q 016901          158 EPALG---NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATI----AK-VNHFIMVSSLGTNKFGFPAA  223 (380)
Q Consensus       158 ~~a~~---~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~~----~~-v~r~V~~SS~~~~~~~~~~~  223 (380)
                      +++++   ++|+||||||......      .++...+++|+.|+.++++++..    .+ .++||++||..+....    
T Consensus        68 ~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----  143 (244)
T 1cyd_A           68 EKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTF----  143 (244)
T ss_dssp             HHHHTTCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC----
T ss_pred             HHHHHHcCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCC----
Confidence            99885   4899999999653221      12234578999999998887754    35 5799999998764321    


Q ss_pred             hhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCccccccc-ce-eeccCCcccCCCCCHHHHHHHHHH
Q 016901          224 ILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETH-NI-TLSQEDTLFGGQVSNLQVAELLAC  294 (380)
Q Consensus       224 ~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~~~-~~-~~~~~~~~~~~~i~~~DvA~~i~~  294 (380)
                        .....|+.+|.+.|.+++.       .|+++++||||+++++........ .. .........+.+++++|+|++++.
T Consensus       144 --~~~~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  221 (244)
T 1cyd_A          144 --PNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILF  221 (244)
T ss_dssp             --TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHH
T ss_pred             --CCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccCHHHHHHHHhcCCccCCCCHHHHHHHHHH
Confidence              2345799999999988762       689999999999998753211000 00 000011123468999999999999


Q ss_pred             HHhCCC-CccCcEEEEecCC
Q 016901          295 MAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       295 ~l~~~~-~~~~~~~ni~~~~  313 (380)
                      ++.++. ...|+.+++.++.
T Consensus       222 l~~~~~~~~~G~~~~v~gG~  241 (244)
T 1cyd_A          222 LLSDRSASTSGGGILVDAGY  241 (244)
T ss_dssp             HHSGGGTTCCSSEEEESTTG
T ss_pred             HhCchhhcccCCEEEECCCc
Confidence            997653 3457888888774

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.93  E-value=8.3e-26  Score=208.84  Aligned_cols=217  Identities=14%  Similarity=0.114  Sum_probs=159.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-CchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVR-SVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      +++|+||||||+|+||++++++|+++|++|++++| +.++.+.+.+.++..+             .++.++.+|++|.++
T Consensus        19 ~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~-------------~~~~~~~~D~~~~~~   85 (274)
T 1ja9_A           19 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLG-------------AQGVAIQADISKPSE   85 (274)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-------------CCEEEEECCTTSHHH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcC-------------CcEEEEEecCCCHHH
Confidence            46789999999999999999999999999999999 7666666555544321             578899999999998


Q ss_pred             HHHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHHHc---CCCEEEEEccCCCCCCCC
Q 016901          157 IEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIA---KVNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       157 ~~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~~~---~v~r~V~~SS~~~~~~~~  220 (380)
                      ++++++       ++|+||||||......      .++...+++|+.|+.++++++...   + ++||++||......+.
T Consensus        86 ~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~~  164 (274)
T 1ja9_A           86 VVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIILTSSIAAVMTGI  164 (274)
T ss_dssp             HHHHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-EEEEEECCGGGTCCSC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CEEEEEcChHhccCCC
Confidence            888775       7999999999653211      122345789999999999988764   4 6999999987641111


Q ss_pred             chhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCccccccc-------cee------eccCCcccC
Q 016901          221 PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETH-------NIT------LSQEDTLFG  280 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~~~-------~~~------~~~~~~~~~  280 (380)
                           .....|+.+|.+.|.+++.       .|+++++||||+++++........       ...      ........+
T Consensus       165 -----~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (274)
T 1ja9_A          165 -----PNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLK  239 (274)
T ss_dssp             -----CSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTS
T ss_pred             -----CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcCCCC
Confidence                 2335799999999988763       589999999999988743210000       000      000111234


Q ss_pred             CCCCHHHHHHHHHHHHhCCC-CccCcEEEEecCC
Q 016901          281 GQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       281 ~~i~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      .+++++|+|++++.++.++. ...|++|++.+|.
T Consensus       240 ~~~~~~dva~~i~~l~~~~~~~~~G~~~~v~gG~  273 (274)
T 1ja9_A          240 RIGYPADIGRAVSALCQEESEWINGQVIKLTGGG  273 (274)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CccCHHHHHHHHHHHhCcccccccCcEEEecCCc
Confidence            67899999999999997643 2368899998874

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.93  E-value=2.2e-25  Score=205.13  Aligned_cols=215  Identities=13%  Similarity=0.092  Sum_probs=158.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++++|+||||+|+||++++++|+++|++|++++|+.++.++..+.+.                .++.++.+|++|.+++
T Consensus        10 ~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------------~~~~~~~~D~~~~~~v   73 (265)
T 2o23_A           10 VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLG----------------NNCVFAPADVTSEKDV   73 (265)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHC----------------TTEEEEECCTTCHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhC----------------CceEEEEcCCCCHHHH
Confidence            467899999999999999999999999999999999877666544321                5789999999999988


Q ss_pred             HHHhc-------CCCEEEEccccCccc------------cCCCCCcchhhHHHHHHHHHHHHHc----------CCCEEE
Q 016901          158 EPALG-------NASVVICCIGASEKE------------VFDITGPYRIDFQATKNLVDAATIA----------KVNHFI  208 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~~~------------~~~~~~~~~~nv~g~~~ll~a~~~~----------~v~r~V  208 (380)
                      +++++       ++|+||||||.....            ..++...+++|+.++.++++++...          +.++||
T Consensus        74 ~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv  153 (265)
T 2o23_A           74 QTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVII  153 (265)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEE
T ss_pred             HHHHHHHHHHCCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEE
Confidence            88775       899999999965321            1123345789999999999988654          567999


Q ss_pred             EEccCCCCCCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccce-eeccCCcccC
Q 016901          209 MVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNI-TLSQEDTLFG  280 (380)
Q Consensus       209 ~~SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~-~~~~~~~~~~  280 (380)
                      ++||......      ......|+.+|.+.+.+.+       ..|+++++|+||++.++.......... .+.......+
T Consensus       154 ~isS~~~~~~------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~  227 (265)
T 2o23_A          154 NTASVAAFEG------QVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFPS  227 (265)
T ss_dssp             EECCTHHHHC------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----------CHHHHTCSSSC
T ss_pred             EeCChhhcCC------CCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccCHHHHHHHHHcCCCcC
Confidence            9999765321      1234579999999887765       268999999999998874321110000 0011111114


Q ss_pred             CCCCHHHHHHHHHHHHhCCCCccCcEEEEecCCCC
Q 016901          281 GQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTA  315 (380)
Q Consensus       281 ~~i~~~DvA~~i~~~l~~~~~~~~~~~ni~~~~~~  315 (380)
                      .+++++|+|++++.++.+.. ..|+++++.++...
T Consensus       228 ~~~~~~dva~~~~~l~~~~~-~~G~~i~vdgG~~~  261 (265)
T 2o23_A          228 RLGDPAEYAHLVQAIIENPF-LNGEVIRLDGAIRM  261 (265)
T ss_dssp             SCBCHHHHHHHHHHHHHCTT-CCSCEEEESTTCCC
T ss_pred             CCCCHHHHHHHHHHHhhcCc-cCceEEEECCCEec
Confidence            57899999999999997654 67899999887644

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.93  E-value=5.4e-25  Score=202.39  Aligned_cols=217  Identities=16%  Similarity=0.136  Sum_probs=161.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++|+||||||+|+||++++++|+++|++|++++|+.++.+...+.+...+             .++.++.+|++|.+++
T Consensus         7 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~D~~~~~~~   73 (260)
T 2ae2_A            7 LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKG-------------FKVEASVCDLSSRSER   73 (260)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------------CEEEEEECCTTCHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------------CcEEEEEcCCCCHHHH
Confidence            467899999999999999999999999999999999887776665554321             5688999999999888


Q ss_pred             HHHh--------cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCCC
Q 016901          158 EPAL--------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       158 ~~a~--------~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~~  219 (380)
                      ++++        +++|+||||||......      .++...+++|+.|+.++++++    ++.+.++||++||.......
T Consensus        74 ~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  153 (260)
T 2ae2_A           74 QELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAV  153 (260)
T ss_dssp             HHHHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCC
T ss_pred             HHHHHHHHHHcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCC
Confidence            8777        57999999999653211      123345789999999998887    35667899999997653321


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcccc-cccc-e----eeccCCcccCCCCCHH
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-ETHN-I----TLSQEDTLFGGQVSNL  286 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~-~~~~-~----~~~~~~~~~~~~i~~~  286 (380)
                            .....|+.+|.+.+.+.+.       .|+++++|+||.+.++..... .... .    .+. .....+.+++++
T Consensus       154 ------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  226 (260)
T 2ae2_A          154 ------PYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLI-DRCALRRMGEPK  226 (260)
T ss_dssp             ------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHH-HTSTTCSCBCHH
T ss_pred             ------CCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHH-hcCCCCCCCCHH
Confidence                  2345799999999988762       589999999999988732110 0000 0    010 111234578999


Q ss_pred             HHHHHHHHHHhCCC-CccCcEEEEecCCC
Q 016901          287 QVAELLACMAKNRS-LSYCKVVEVIAETT  314 (380)
Q Consensus       287 DvA~~i~~~l~~~~-~~~~~~~ni~~~~~  314 (380)
                      |+|++++.++.... ...|+++++.+|..
T Consensus       227 dvA~~v~~l~s~~~~~~tG~~~~vdgG~~  255 (260)
T 2ae2_A          227 ELAAMVAFLCFPAASYVTGQIIYVDGGLM  255 (260)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHHcCccccCCCCCEEEECCCcc
Confidence            99999999987543 34688999988753

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.93  E-value=6.5e-25  Score=205.49  Aligned_cols=224  Identities=15%  Similarity=0.117  Sum_probs=166.0

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCCh
Q 016901           75 ADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (380)
Q Consensus        75 ~~~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~  154 (380)
                      |..+++|+||||||+|+||++++++|+++|++|++++|+.++.++..+.+...            ...++.++.+|++|.
T Consensus        36 m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~------------~~~~~~~~~~Dv~d~  103 (293)
T 3rih_A           36 MFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGEL------------GAGNVIGVRLDVSDP  103 (293)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTS------------SSSCEEEEECCTTCH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhh------------CCCcEEEEEEeCCCH
Confidence            34457899999999999999999999999999999999998887776655432            114789999999999


Q ss_pred             hcHHHHh-------cCCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCC
Q 016901          155 VQIEPAL-------GNASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNK  217 (380)
Q Consensus       155 ~~~~~a~-------~~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~  217 (380)
                      +++++++       +++|+||||||.......      ++...+++|+.|+.++++++    ++.+.++||++||.....
T Consensus       104 ~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~  183 (293)
T 3rih_A          104 GSCADAARTVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPV  183 (293)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTT
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhcc
Confidence            8877765       478999999996543221      22344789999999999887    456678999999976531


Q ss_pred             CCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHH
Q 016901          218 FGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAE  290 (380)
Q Consensus       218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~  290 (380)
                      .+     ......|+.+|.+.+.+.+       ..|+++++|+||++++|...................+.+.+++|+|+
T Consensus       184 ~~-----~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~  258 (293)
T 3rih_A          184 TG-----YPGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMGEEYISGMARSIPMGMLGSPVDIGH  258 (293)
T ss_dssp             BB-----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTCHHHHHHHHTTSTTSSCBCHHHHHH
T ss_pred             CC-----CCCCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhccHHHHHHHHhcCCCCCCCCHHHHHH
Confidence            11     1234579999999998775       26999999999999987432111000000011122345679999999


Q ss_pred             HHHHHHhCCC-CccCcEEEEecCCCC
Q 016901          291 LLACMAKNRS-LSYCKVVEVIAETTA  315 (380)
Q Consensus       291 ~i~~~l~~~~-~~~~~~~ni~~~~~~  315 (380)
                      +++.++.... ...|++|++.+|...
T Consensus       259 ~v~fL~s~~a~~itG~~i~vdGG~~~  284 (293)
T 3rih_A          259 LAAFLATDEAGYITGQAIVVDGGQVL  284 (293)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred             HHHHHhCccccCCCCCEEEECCCccC
Confidence            9999997543 356899999888754

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.93  E-value=3e-25  Score=206.09  Aligned_cols=218  Identities=18%  Similarity=0.175  Sum_probs=161.4

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .++++++|||||+|+||+++++.|+++|++|++++|+.++.+++.+.+...+             .++.++.+|++|.++
T Consensus        19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-------------~~~~~~~~Dv~~~~~   85 (277)
T 2rhc_B           19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG-------------VEADGRTCDVRSVPE   85 (277)
T ss_dssp             CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------------CCEEEEECCTTCHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------------CceEEEECCCCCHHH
Confidence            3567899999999999999999999999999999999887776665554321             568899999999988


Q ss_pred             HHHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHHHc------CCCEEEEEccCCCCC
Q 016901          157 IEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIA------KVNHFIMVSSLGTNK  217 (380)
Q Consensus       157 ~~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~~~------~v~r~V~~SS~~~~~  217 (380)
                      ++++++       ++|+||||||......      .++...+++|+.|+.++++++...      +.++||++||.....
T Consensus        86 v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~  165 (277)
T 2rhc_B           86 IEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQ  165 (277)
T ss_dssp             HHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTS
T ss_pred             HHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECcccccc
Confidence            887764       7999999999653221      122345789999999999987654      567999999986532


Q ss_pred             CCCchhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcccc-----c------ccceeeccCCccc
Q 016901          218 FGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-----E------THNITLSQEDTLF  279 (380)
Q Consensus       218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~-----~------~~~~~~~~~~~~~  279 (380)
                      ..      .....|+.+|.+.+.+.+.       .|+++++|+||+++++.....     .      .............
T Consensus       166 ~~------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~  239 (277)
T 2rhc_B          166 GV------VHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPI  239 (277)
T ss_dssp             CC------TTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHSTT
T ss_pred             CC------CCCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhcCCC
Confidence            21      2345799999999987652       589999999999998742110     0      0000000011123


Q ss_pred             CCCCCHHHHHHHHHHHHhCCC-CccCcEEEEecCC
Q 016901          280 GGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       280 ~~~i~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      +.+++++|+|++++.++.++. ...|++|++.+|.
T Consensus       240 ~r~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdGG~  274 (277)
T 2rhc_B          240 GRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGGL  274 (277)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCCc
Confidence            457899999999999997653 3468899998874

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.93  E-value=3.3e-25  Score=204.65  Aligned_cols=217  Identities=11%  Similarity=0.051  Sum_probs=156.1

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCCh
Q 016901           75 ADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (380)
Q Consensus        75 ~~~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~  154 (380)
                      |..+++|+||||||+|+||++++++|+++|++|++++|+.++.+++.+.+   +             .++.++.+|++|.
T Consensus        22 m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~-------------~~~~~~~~Dv~d~   85 (266)
T 3grp_A           22 MFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL---G-------------KDVFVFSANLSDR   85 (266)
T ss_dssp             TTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---C-------------SSEEEEECCTTSH
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---C-------------CceEEEEeecCCH
Confidence            34567899999999999999999999999999999999988776654422   1             5789999999999


Q ss_pred             hcHHHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCC
Q 016901          155 VQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNK  217 (380)
Q Consensus       155 ~~~~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~  217 (380)
                      ++++++++       ++|+||||||......      .++...+++|+.|+.++++++    ++.+.++||++||.....
T Consensus        86 ~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~  165 (266)
T 3grp_A           86 KSIKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVV  165 (266)
T ss_dssp             HHHHHHHHHHHHHHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC----
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcC
Confidence            88887764       7999999999653221      123445789999966666554    456678999999976533


Q ss_pred             CCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHH
Q 016901          218 FGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAE  290 (380)
Q Consensus       218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~  290 (380)
                      .      ......|+.+|.+.+.+.+       ..|+++++|+||++.++...................+.+.+++|+|+
T Consensus       166 ~------~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~  239 (266)
T 3grp_A          166 G------NPGQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLNEKQKEAIMAMIPMKRMGIGEEIAF  239 (266)
T ss_dssp             ---------CHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCCHHHHHHHHTTCTTCSCBCHHHHHH
T ss_pred             C------CCCchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhccCHHHHHHHHhcCCCCCCcCHHHHHH
Confidence            2      1234679999999987765       26899999999999887321110000000111222345789999999


Q ss_pred             HHHHHHhCCC-CccCcEEEEecCC
Q 016901          291 LLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       291 ~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      +++.++.+.. ...|+++++.+|.
T Consensus       240 ~v~~L~s~~~~~itG~~i~vdGG~  263 (266)
T 3grp_A          240 ATVYLASDEAAYLTGQTLHINGGM  263 (266)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHhCccccCccCCEEEECCCe
Confidence            9999997643 3578999998875

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.93  E-value=2.6e-25  Score=202.71  Aligned_cols=218  Identities=12%  Similarity=0.075  Sum_probs=163.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++|+++||||+|+||++++++|+++|++|++++|+.++.+++.+.++..+             .++.++.+|++|.+++
T Consensus         3 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~D~~~~~~~   69 (247)
T 3lyl_A            3 LNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKG-------------FKARGLVLNISDIESI   69 (247)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT-------------CCEEEEECCTTCHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------------CceEEEEecCCCHHHH
Confidence            467899999999999999999999999999999999988887776665432             5789999999999888


Q ss_pred             HHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCCCC
Q 016901          158 EPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~~~  220 (380)
                      +++++       ++|+||||||......      .++...+++|+.|+.++++++.    +.+.++||++||......  
T Consensus        70 ~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~--  147 (247)
T 3lyl_A           70 QNFFAEIKAENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAG--  147 (247)
T ss_dssp             HHHHHHHHHTTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC--
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccC--
Confidence            87763       5899999999753321      1233457899999999888764    345679999999754221  


Q ss_pred             chhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHH
Q 016901          221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA  293 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~  293 (380)
                          ......|+.+|.+.+.+.+       ..|+++++|+||++.++...................+.+.+++|+|++++
T Consensus       148 ----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~  223 (247)
T 3lyl_A          148 ----NPGQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLTDEQKSFIATKIPSGQIGEPKDIAAAVA  223 (247)
T ss_dssp             ----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSCHHHHHHHHTTSTTCCCBCHHHHHHHHH
T ss_pred             ----CCCcHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhccHHHHHHHhhcCCCCCCcCHHHHHHHHH
Confidence                1234579999999887765       26899999999999887432111111111111223345789999999999


Q ss_pred             HHHhCCC-CccCcEEEEecCCC
Q 016901          294 CMAKNRS-LSYCKVVEVIAETT  314 (380)
Q Consensus       294 ~~l~~~~-~~~~~~~ni~~~~~  314 (380)
                      .++.+.. ...|++|++.+|..
T Consensus       224 ~l~s~~~~~~tG~~i~vdgG~~  245 (247)
T 3lyl_A          224 FLASEEAKYITGQTLHVNGGMY  245 (247)
T ss_dssp             HHHSGGGTTCCSCEEEESTTSS
T ss_pred             HHhCCCcCCccCCEEEECCCEe
Confidence            9997643 34689999988764

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.93  E-value=2.6e-25  Score=204.20  Aligned_cols=217  Identities=14%  Similarity=0.094  Sum_probs=159.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-CchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVR-SVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      +++++||||||+|+||++++++|+++|++|++++| +.++.+.+.+.+...+             .++.++.+|++|.++
T Consensus         5 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~-------------~~~~~~~~D~~~~~~   71 (261)
T 1gee_A            5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVG-------------GEAIAVKGDVTVESD   71 (261)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-------------CEEEEEECCTTSHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcC-------------CceEEEECCCCCHHH
Confidence            46789999999999999999999999999999999 7776666655544321             568899999999988


Q ss_pred             HHHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHH----HcC-CCEEEEEccCCCCCC
Q 016901          157 IEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAK-VNHFIMVSSLGTNKF  218 (380)
Q Consensus       157 ~~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~----~~~-v~r~V~~SS~~~~~~  218 (380)
                      +.++++       ++|+||||||......      .++...+++|+.++.++++++.    +.+ .++||++||......
T Consensus        72 ~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~  151 (261)
T 1gee_A           72 VINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIP  151 (261)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCC
Confidence            887764       7999999999653211      1233457899999998887764    344 679999999765332


Q ss_pred             CCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccccc-ccc-e-eeccCCcccCCCCCHHHH
Q 016901          219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE-THN-I-TLSQEDTLFGGQVSNLQV  288 (380)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~-~~~-~-~~~~~~~~~~~~i~~~Dv  288 (380)
                            ..+...|+.+|.+.+.+.+       ..|+++++||||++++|...... ... . .+. .....+.+++++|+
T Consensus       152 ------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~dv  224 (261)
T 1gee_A          152 ------WPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVE-SMIPMGYIGEPEEI  224 (261)
T ss_dssp             ------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHH-TTCTTSSCBCHHHH
T ss_pred             ------CCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccChhHHHHHH-hcCCCCCCcCHHHH
Confidence                  1344679999999887765       25899999999999998532110 000 0 000 11122457899999


Q ss_pred             HHHHHHHHhCC-CCccCcEEEEecCCC
Q 016901          289 AELLACMAKNR-SLSYCKVVEVIAETT  314 (380)
Q Consensus       289 A~~i~~~l~~~-~~~~~~~~ni~~~~~  314 (380)
                      |++++.++.+. ....|+++++.++..
T Consensus       225 a~~~~~l~~~~~~~~~G~~~~v~gg~~  251 (261)
T 1gee_A          225 AAVAAWLASSEASYVTGITLFADGGMT  251 (261)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHhCccccCCCCcEEEEcCCcc
Confidence            99999999754 234688999988753

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.93  E-value=1.2e-24  Score=200.18  Aligned_cols=219  Identities=14%  Similarity=0.120  Sum_probs=157.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++++||||||+|+||++++++|+++|++|++++|+.++.+++.+.+.... .          ..++.++.+|++|.+++
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~----------~~~~~~~~~D~~~~~~v   73 (260)
T 2z1n_A            5 IQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLV-S----------GAQVDIVAGDIREPGDI   73 (260)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHS-T----------TCCEEEEECCTTCHHHH
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-C----------CCeEEEEEccCCCHHHH
Confidence            467899999999999999999999999999999999887776665543210 0          03688999999999998


Q ss_pred             HHHhc------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCCCCc
Q 016901          158 EPALG------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGFP  221 (380)
Q Consensus       158 ~~a~~------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~~~~  221 (380)
                      +++++      ++|+||||||......      .++...+++|+.|+.++++++    ++.+.++||++||.......  
T Consensus        74 ~~~~~~~~~~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--  151 (260)
T 2z1n_A           74 DRLFEKARDLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPW--  151 (260)
T ss_dssp             HHHHHHHHHTTCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC--
T ss_pred             HHHHHHHHHhcCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCC--
Confidence            88875      5999999999643211      123345789999986666654    45677899999998764321  


Q ss_pred             hhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccc----------ccccc-eeeccCCcccCCCC
Q 016901          222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAY----------KETHN-ITLSQEDTLFGGQV  283 (380)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~----------~~~~~-~~~~~~~~~~~~~i  283 (380)
                          .....|+.+|...+.+.+       ..|+++++|+||++++|....          ..... ..........+.+.
T Consensus       152 ----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~  227 (260)
T 2z1n_A          152 ----QDLALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVG  227 (260)
T ss_dssp             ----TTBHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------------CCTTSSCC
T ss_pred             ----CCCchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhcCCCCCcc
Confidence                234579999999987765       258999999999998875320          00000 00000111234568


Q ss_pred             CHHHHHHHHHHHHhCC-CCccCcEEEEecCC
Q 016901          284 SNLQVAELLACMAKNR-SLSYCKVVEVIAET  313 (380)
Q Consensus       284 ~~~DvA~~i~~~l~~~-~~~~~~~~ni~~~~  313 (380)
                      +++|+|++++.++.+. ....|+++++.+|.
T Consensus       228 ~~~dva~~v~~l~s~~~~~~tG~~i~vdGG~  258 (260)
T 2z1n_A          228 KPEELASVVAFLASEKASFITGAVIPVDGGA  258 (260)
T ss_dssp             CHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred             CHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence            9999999999998764 33568899988774

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.93  E-value=3.9e-25  Score=204.11  Aligned_cols=221  Identities=14%  Similarity=0.091  Sum_probs=160.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++|++|||||+|+||++++++|+++|++|++++|+.++.++..+.+....           ...++.++.+|++|.+++
T Consensus        11 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-----------~~~~~~~~~~D~~~~~~v   79 (267)
T 1iy8_A           11 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETA-----------PDAEVLTTVADVSDEAQV   79 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHC-----------TTCCEEEEECCTTSHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc-----------CCceEEEEEccCCCHHHH
Confidence            467899999999999999999999999999999999887776665554320           015688999999999888


Q ss_pred             HHHhc-------CCCEEEEccccCcc-cc------CCCCCcchhhHHHHHHHHHH----HHHcCCCEEEEEccCCCCCCC
Q 016901          158 EPALG-------NASVVICCIGASEK-EV------FDITGPYRIDFQATKNLVDA----ATIAKVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~~-~~------~~~~~~~~~nv~g~~~ll~a----~~~~~v~r~V~~SS~~~~~~~  219 (380)
                      +++++       ++|+||||||.... ..      .++...+++|+.|+.+++++    +++.+.++||++||...... 
T Consensus        80 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-  158 (267)
T 1iy8_A           80 EAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRG-  158 (267)
T ss_dssp             HHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSB-
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccC-
Confidence            87764       79999999996532 11      12334478999988766554    45567789999999766332 


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccc----ccccee----eccCCcccCCCCC
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK----ETHNIT----LSQEDTLFGGQVS  284 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~----~~~~~~----~~~~~~~~~~~i~  284 (380)
                           ......|+.+|.+.+.+.+       ..|+++++|+||++++|.....    ......    ........+.+.+
T Consensus       159 -----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~  233 (267)
T 1iy8_A          159 -----IGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGE  233 (267)
T ss_dssp             -----CSSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBC
T ss_pred             -----CCCCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccCCCCCCcC
Confidence                 1234579999999997765       2699999999999998742110    000000    0001112345789


Q ss_pred             HHHHHHHHHHHHhCCC-CccCcEEEEecCCCC
Q 016901          285 NLQVAELLACMAKNRS-LSYCKVVEVIAETTA  315 (380)
Q Consensus       285 ~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~~~  315 (380)
                      ++|+|++++.++.++. ...|+++++.+|...
T Consensus       234 ~~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~  265 (267)
T 1iy8_A          234 APEIAAVVAFLLSDDASYVNATVVPIDGGQSA  265 (267)
T ss_dssp             HHHHHHHHHHHTSGGGTTCCSCEEEESTTTTT
T ss_pred             HHHHHHHHHHHcCccccCCCCCEEEECCCccc
Confidence            9999999999987642 356899999888643

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.93  E-value=1.1e-25  Score=204.49  Aligned_cols=215  Identities=15%  Similarity=0.085  Sum_probs=156.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-eCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAG-VRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l-~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      +|+|+||||+|+||++++++|+++|++|+++ .|+.++.+.+.+.++..+             .++.++.+|++|.++++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~D~~~~~~~~   67 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYG-------------GQAITFGGDVSKEADVE   67 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHT-------------CEEEEEECCTTSHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC-------------CcEEEEeCCCCCHHHHH
Confidence            3689999999999999999999999999995 788877766665554322             56889999999999888


Q ss_pred             HHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHHH----cCCCEEEEEccCCCCCCCCc
Q 016901          159 PALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFGFP  221 (380)
Q Consensus       159 ~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~~----~~v~r~V~~SS~~~~~~~~~  221 (380)
                      ++++       ++|+||||||......      .++...+++|+.|+.++++++..    .+.++||++||......   
T Consensus        68 ~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~---  144 (244)
T 1edo_A           68 AMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIG---  144 (244)
T ss_dssp             HHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC---
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCC---
Confidence            8774       7999999999654321      12334578999999999888754    46789999999754221   


Q ss_pred             hhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHH
Q 016901          222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLAC  294 (380)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~  294 (380)
                         ......|+.+|.+.+.+.+       ..|+++++||||+++++...................+.+++++|+|++++.
T Consensus       145 ---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  221 (244)
T 1edo_A          145 ---NIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRTGQPENVAGLVEF  221 (244)
T ss_dssp             ---CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHHHHHHHTSCTTCSCBCHHHHHHHHHH
T ss_pred             ---CCCCccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhcChHHHHHHhhcCCCCCCCCHHHHHHHHHH
Confidence               1234579999999887765       268999999999999874321100000000011123457899999999999


Q ss_pred             HHhCCC--CccCcEEEEecCC
Q 016901          295 MAKNRS--LSYCKVVEVIAET  313 (380)
Q Consensus       295 ~l~~~~--~~~~~~~ni~~~~  313 (380)
                      ++..+.  ...|++|++.++.
T Consensus       222 l~~~~~~~~~~G~~~~v~gG~  242 (244)
T 1edo_A          222 LALSPAASYITGQAFTIDGGI  242 (244)
T ss_dssp             HHHCSGGGGCCSCEEEESTTT
T ss_pred             HhCCCccCCcCCCEEEeCCCc
Confidence            985442  2458899998874

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.93  E-value=5.8e-25  Score=200.89  Aligned_cols=215  Identities=14%  Similarity=0.102  Sum_probs=160.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .+++|++|||||+|+||++++++|+++|++|++++|+.++.+++.+.+.                .++.++.+|++|.++
T Consensus         6 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------------~~~~~~~~Dv~d~~~   69 (248)
T 3op4_A            6 NLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLG----------------DNGKGMALNVTNPES   69 (248)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG----------------GGEEEEECCTTCHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----------------ccceEEEEeCCCHHH
Confidence            3467899999999999999999999999999999999887776655432                457889999999988


Q ss_pred             HHHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCCC
Q 016901          157 IEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       157 ~~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~~  219 (380)
                      ++++++       ++|+||||||......      .++...+++|+.|+.++++++.    +.+.++||++||...... 
T Consensus        70 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~-  148 (248)
T 3op4_A           70 IEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMG-  148 (248)
T ss_dssp             HHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC-
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCC-
Confidence            887764       7999999999653321      2234458899999999988874    356679999999654221 


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHH
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELL  292 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i  292 (380)
                           ......|+.+|.+.+.+.+       ..|+++++|+||.+.++...................+.+.+++|+|+++
T Consensus       149 -----~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v  223 (248)
T 3op4_A          149 -----NAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDEQRTATLAQVPAGRLGDPREIASAV  223 (248)
T ss_dssp             -----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSCHHHHHHHHHTCTTCSCBCHHHHHHHH
T ss_pred             -----CCCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence                 1234579999999987765       2689999999999988743211100000001112234578999999999


Q ss_pred             HHHHhCCC-CccCcEEEEecCC
Q 016901          293 ACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       293 ~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      +.++.+.. ...|+++++.+|.
T Consensus       224 ~~L~s~~~~~itG~~i~vdgG~  245 (248)
T 3op4_A          224 AFLASPEAAYITGETLHVNGGM  245 (248)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTS
T ss_pred             HHHcCCccCCccCcEEEECCCe
Confidence            99997643 3468999998875

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.93  E-value=2.5e-25  Score=204.16  Aligned_cols=222  Identities=17%  Similarity=0.109  Sum_probs=166.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .+++|++|||||+|+||++++++|+++|++|++++|+.++.+++.+.+.                .++.++.+|++|.++
T Consensus         5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------------~~~~~~~~Dv~~~~~   68 (255)
T 4eso_A            5 NYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFG----------------PRVHALRSDIADLNE   68 (255)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG----------------GGEEEEECCTTCHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC----------------CcceEEEccCCCHHH
Confidence            4577899999999999999999999999999999999887776655431                578999999999988


Q ss_pred             HHHHh-------cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHHHcC--CCEEEEEccCCCCCCCCc
Q 016901          157 IEPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIAK--VNHFIMVSSLGTNKFGFP  221 (380)
Q Consensus       157 ~~~a~-------~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~~~~--v~r~V~~SS~~~~~~~~~  221 (380)
                      +++++       +++|+||||||......      .++...+++|+.|+.++++++...-  .++||++||......   
T Consensus        69 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~---  145 (255)
T 4eso_A           69 IAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGG---  145 (255)
T ss_dssp             HHHHHHHHHHHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSB---
T ss_pred             HHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCC---
Confidence            77665       47999999999654321      1234458899999999999987531  358999999866432   


Q ss_pred             hhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccc------eeeccCCcccCCCCCHHHH
Q 016901          222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHN------ITLSQEDTLFGGQVSNLQV  288 (380)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~------~~~~~~~~~~~~~i~~~Dv  288 (380)
                         ......|+.+|.+.+.+.+       ..|++++.|+||++.+|.........      ..........+.+.+++|+
T Consensus       146 ---~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedv  222 (255)
T 4eso_A          146 ---HPGMSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTADEV  222 (255)
T ss_dssp             ---CTTBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTTSSCBCHHHH
T ss_pred             ---CCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCCCCCCcCHHHH
Confidence               1234579999999998775       25899999999999988432110000      0000111223456899999


Q ss_pred             HHHHHHHHhCCCCccCcEEEEecCCCCCcchH
Q 016901          289 AELLACMAKNRSLSYCKVVEVIAETTAPLTPM  320 (380)
Q Consensus       289 A~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~  320 (380)
                      |++++.++.+.....|+++++.+|...++.++
T Consensus       223 A~~v~~L~s~~~~itG~~i~vdGG~~~~l~~~  254 (255)
T 4eso_A          223 ARAVLFLAFEATFTTGAKLAVDGGLGQKLSTA  254 (255)
T ss_dssp             HHHHHHHHHTCTTCCSCEEEESTTTTTTBCC-
T ss_pred             HHHHHHHcCcCcCccCCEEEECCCccccCcCc
Confidence            99999998864556799999999987776654

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.93  E-value=6.4e-25  Score=202.19  Aligned_cols=215  Identities=16%  Similarity=0.111  Sum_probs=157.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++|+||||||+|+||++++++|+++|++|++++|+.++.+...+.+.                .++.++.+|++|.+++
T Consensus        10 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------------~~~~~~~~D~~d~~~v   73 (263)
T 3ak4_A           10 LSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLE----------------NGGFAVEVDVTKRASV   73 (263)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCT----------------TCCEEEECCTTCHHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh----------------cCCeEEEEeCCCHHHH
Confidence            467899999999999999999999999999999999876655433110                3678899999999988


Q ss_pred             HHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHHH----cC-CCEEEEEccCCCCCCC
Q 016901          158 EPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATI----AK-VNHFIMVSSLGTNKFG  219 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~~----~~-v~r~V~~SS~~~~~~~  219 (380)
                      +++++       ++|+||||||......      .++...+++|+.|+.++++++..    .+ .++||++||.......
T Consensus        74 ~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  153 (263)
T 3ak4_A           74 DAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGA  153 (263)
T ss_dssp             HHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCC
Confidence            88775       8999999999653221      12334578999999998887753    34 5799999997664321


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCccccc-----c-----cce-eeccCCcccCC
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE-----T-----HNI-TLSQEDTLFGG  281 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~-----~-----~~~-~~~~~~~~~~~  281 (380)
                            .....|+.+|.+.+.+.+.       .|+++++||||++++|......     .     ... .........+.
T Consensus       154 ------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~  227 (263)
T 3ak4_A          154 ------PLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGR  227 (263)
T ss_dssp             ------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCTTCS
T ss_pred             ------CCchhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcCCCCC
Confidence                  2345799999999977652       5999999999999987422100     0     000 00001112345


Q ss_pred             CCCHHHHHHHHHHHHhCCC-CccCcEEEEecCCC
Q 016901          282 QVSNLQVAELLACMAKNRS-LSYCKVVEVIAETT  314 (380)
Q Consensus       282 ~i~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~~  314 (380)
                      +++++|+|++++.++.++. ...|++|++.+|..
T Consensus       228 ~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~  261 (263)
T 3ak4_A          228 IEEPEDVADVVVFLASDAARFMTGQGINVTGGVR  261 (263)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred             CcCHHHHHHHHHHHhCccccCCCCCEEEECcCEe
Confidence            7899999999999997643 34688999988853

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.93  E-value=9.7e-25  Score=199.52  Aligned_cols=216  Identities=13%  Similarity=0.071  Sum_probs=156.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCce-EEEEcCCCChhc
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML-ELVECDLEKRVQ  156 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~Dl~d~~~  156 (380)
                      +++++|+||||+|+||++++++|+++|++|++++|+.++.+...+.+.                .++ .++.+|++|.++
T Consensus         9 ~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------------~~~~~~~~~D~~~~~~   72 (254)
T 2wsb_A            9 LDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELG----------------AAVAARIVADVTDAEA   72 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG----------------GGEEEEEECCTTCHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----------------ccceeEEEEecCCHHH
Confidence            467899999999999999999999999999999999877665544331                356 889999999988


Q ss_pred             HHHHh------cCCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCCCC
Q 016901          157 IEPAL------GNASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       157 ~~~a~------~~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~~~  220 (380)
                      +++++      +++|+||||||.......      ++...+++|+.|+.++++++    ++.+.++||++||....... 
T Consensus        73 ~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-  151 (254)
T 2wsb_A           73 MTAAAAEAEAVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVN-  151 (254)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-
T ss_pred             HHHHHHHHHhhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCC-
Confidence            88776      579999999996533211      12334779999977766654    45677899999997664321 


Q ss_pred             chhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcccccc--cceeeccCCcccCCCCCHHHHHHH
Q 016901          221 PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET--HNITLSQEDTLFGGQVSNLQVAEL  291 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~~--~~~~~~~~~~~~~~~i~~~DvA~~  291 (380)
                      +   ..+...|+.+|.+.|.+++.       .|+++++||||+++++.......  ............+.+++++|+|++
T Consensus       152 ~---~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  228 (254)
T 2wsb_A          152 R---PQFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTPMGRCGEPSEIAAA  228 (254)
T ss_dssp             S---SSCBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCHHHHHHHHHTSTTSSCBCHHHHHHH
T ss_pred             C---CCcchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccChHHHHHHHhcCCCCCCCCHHHHHHH
Confidence            1   12235799999999987752       58999999999999874321100  000000011122457899999999


Q ss_pred             HHHHHhCCC-CccCcEEEEecCC
Q 016901          292 LACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       292 i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      ++.++.+.. ...|++|++.++.
T Consensus       229 ~~~l~~~~~~~~~G~~~~v~gG~  251 (254)
T 2wsb_A          229 ALFLASPAASYVTGAILAVDGGY  251 (254)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHhCcccccccCCEEEECCCE
Confidence            999997642 3468899988774

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.93  E-value=7.2e-25  Score=203.77  Aligned_cols=218  Identities=14%  Similarity=0.150  Sum_probs=160.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ++++|++|||||+|+||++++++|+++|++|++++|+.++.++..+.+...+             .++.++.+|++|.++
T Consensus        21 m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~-------------~~~~~~~~Dv~d~~~   87 (279)
T 3sju_A           21 MSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAG-------------HDVDGSSCDVTSTDE   87 (279)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT-------------CCEEEEECCTTCHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------------CcEEEEECCCCCHHH
Confidence            3467899999999999999999999999999999999988877776665432             578999999999988


Q ss_pred             HHHHh-------cCCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHHHH------cCCCEEEEEccCCCCC
Q 016901          157 IEPAL-------GNASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAATI------AKVNHFIMVSSLGTNK  217 (380)
Q Consensus       157 ~~~a~-------~~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~~~------~~v~r~V~~SS~~~~~  217 (380)
                      +++++       +++|+||||||.......      ++...+++|+.|+.++++++..      .+.++||++||.....
T Consensus        88 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~  167 (279)
T 3sju_A           88 VHAAVAAAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQ  167 (279)
T ss_dssp             HHHHHHHHHHHHCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTS
T ss_pred             HHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhcc
Confidence            87766       379999999996532211      2334477999999999988754      4567999999986643


Q ss_pred             CCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccc-----------cceeeccCCccc
Q 016901          218 FGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-----------HNITLSQEDTLF  279 (380)
Q Consensus       218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~-----------~~~~~~~~~~~~  279 (380)
                      ..      .....|+.+|.+.+.+.+       ..|+++++|+||++.+|.......           ............
T Consensus       168 ~~------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~  241 (279)
T 3sju_A          168 GV------MYAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPL  241 (279)
T ss_dssp             CC------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCTT
T ss_pred             CC------CCChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCCC
Confidence            21      234579999999987765       268999999999998874211000           000000112223


Q ss_pred             CCCCCHHHHHHHHHHHHhCCC-CccCcEEEEecCC
Q 016901          280 GGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       280 ~~~i~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      +.+.+++|+|++++.++.+.. ...|+++++.+|.
T Consensus       242 ~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~  276 (279)
T 3sju_A          242 GRYSTPEEVAGLVGYLVTDAAASITAQALNVCGGL  276 (279)
T ss_dssp             SSCBCHHHHHHHHHHHTSSGGGGCCSCEEEESTTC
T ss_pred             CCCCCHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence            457899999999999987653 3578999998875

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.93  E-value=4.9e-25  Score=203.94  Aligned_cols=219  Identities=15%  Similarity=0.098  Sum_probs=163.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++|++|||||+|+||++++++|+++|++|++++|+.+..+++.+.+...+             .++.++.+|++|.+++
T Consensus        26 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~Dv~d~~~v   92 (270)
T 3ftp_A           26 LDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAG-------------LEGRGAVLNVNDATAV   92 (270)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHT-------------CCCEEEECCTTCHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------------CcEEEEEEeCCCHHHH
Confidence            467899999999999999999999999999999999988877776665432             5688999999999888


Q ss_pred             HHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCCCC
Q 016901          158 EPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~~~  220 (380)
                      +++++       ++|+||||||......      .++...+++|+.|+.++++++.    +.+.++||++||......  
T Consensus        93 ~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~--  170 (270)
T 3ftp_A           93 DALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAG--  170 (270)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC--
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCC--
Confidence            87764       7999999999653321      1233457899999999998874    345579999999754221  


Q ss_pred             chhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHH
Q 016901          221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA  293 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~  293 (380)
                          ......|+.+|.+.+.+.+       ..|+++++|+||++.++...................+.+.+++|+|++++
T Consensus       171 ----~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~  246 (270)
T 3ftp_A          171 ----NPGQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGLPQEQQTALKTQIPLGRLGSPEDIAHAVA  246 (270)
T ss_dssp             ----CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHSCHHHHHHHHTTCTTCSCBCHHHHHHHHH
T ss_pred             ----CCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhcCHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence                1234579999999987765       26899999999999877321110000000111222345789999999999


Q ss_pred             HHHhCC-CCccCcEEEEecCCCC
Q 016901          294 CMAKNR-SLSYCKVVEVIAETTA  315 (380)
Q Consensus       294 ~~l~~~-~~~~~~~~ni~~~~~~  315 (380)
                      .++... ....|++|++.+|...
T Consensus       247 ~L~s~~~~~itG~~i~vdGG~~~  269 (270)
T 3ftp_A          247 FLASPQAGYITGTTLHVNGGMFM  269 (270)
T ss_dssp             HHHSGGGTTCCSCEEEESTTSSC
T ss_pred             HHhCCCcCCccCcEEEECCCccc
Confidence            998654 3357899999888643

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.93  E-value=1.6e-25  Score=204.85  Aligned_cols=216  Identities=9%  Similarity=0.024  Sum_probs=137.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++++||||||+|+||++++++|+++|++|++++|+.++.+++.+.+...+             .++.++.+|++|.+++
T Consensus         7 ~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~D~~~~~~~   73 (253)
T 3qiv_A            7 FENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADG-------------GTAISVAVDVSDPESA   73 (253)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------------CEEEEEECCTTSHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC-------------CcEEEEEccCCCHHHH
Confidence            467899999999999999999999999999999999988887777665432             6789999999999888


Q ss_pred             HHHhc-------CCCEEEEccccCcc---------ccCCCCCcchhhHHHHHHHHHH----HHHcCCCEEEEEccCCCCC
Q 016901          158 EPALG-------NASVVICCIGASEK---------EVFDITGPYRIDFQATKNLVDA----ATIAKVNHFIMVSSLGTNK  217 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~~---------~~~~~~~~~~~nv~g~~~ll~a----~~~~~v~r~V~~SS~~~~~  217 (380)
                      +++++       ++|+||||||....         +..++...+++|+.|+.+++++    +++.+.++||++||.....
T Consensus        74 ~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  153 (253)
T 3qiv_A           74 KAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWL  153 (253)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC-----
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccC
Confidence            87764       89999999996321         1112334578999996665555    4556677999999987631


Q ss_pred             CCCchhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcccccccc-eeeccCCcccCCCCCHHHHH
Q 016901          218 FGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHN-ITLSQEDTLFGGQVSNLQVA  289 (380)
Q Consensus       218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~~~~-~~~~~~~~~~~~~i~~~DvA  289 (380)
                               ....|+.+|.+.+.+++.       .|+++++|+||++++|......... ..........+.+.+++|+|
T Consensus       154 ---------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  224 (253)
T 3qiv_A          154 ---------YSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPKEMVDDIVKGLPLSRMGTPDDLV  224 (253)
T ss_dssp             ---------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC-------------------------------CCHHH
T ss_pred             ---------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcHHHHHHHhccCCCCCCCCHHHHH
Confidence                     234699999999987752       5899999999999988532211100 00011111223457889999


Q ss_pred             HHHHHHHhCCC-CccCcEEEEecCCCC
Q 016901          290 ELLACMAKNRS-LSYCKVVEVIAETTA  315 (380)
Q Consensus       290 ~~i~~~l~~~~-~~~~~~~ni~~~~~~  315 (380)
                      ++++.++.+.. ...|++|++.+|...
T Consensus       225 ~~~~~l~s~~~~~~tG~~~~vdgG~~~  251 (253)
T 3qiv_A          225 GMCLFLLSDEASWITGQIFNVDGGQII  251 (253)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEC------
T ss_pred             HHHHHHcCccccCCCCCEEEECCCeec
Confidence            99999997543 346899999988643

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.93  E-value=3.7e-25  Score=205.83  Aligned_cols=223  Identities=12%  Similarity=0.070  Sum_probs=166.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .+.+|++|||||+|+||++++++|+++|++|++++|+.++.+++.+.+...             ..++.++.+|++|.++
T Consensus         5 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~Dv~~~~~   71 (280)
T 3tox_A            5 RLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGG-------------GGEAAALAGDVGDEAL   71 (280)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTT-------------TCCEEECCCCTTCHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-------------CCcEEEEECCCCCHHH
Confidence            457789999999999999999999999999999999998887776655432             1678999999999988


Q ss_pred             HHHHhc-------CCCEEEEccccCcc-------ccCCCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCC
Q 016901          157 IEPALG-------NASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKF  218 (380)
Q Consensus       157 ~~~a~~-------~~d~Vi~~Ag~~~~-------~~~~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~  218 (380)
                      ++++++       ++|+||||||....       +..++...+++|+.|+.++++++.    +.+.++||++||......
T Consensus        72 v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~  151 (280)
T 3tox_A           72 HEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTA  151 (280)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTB
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcC
Confidence            887763       79999999996421       111234458899999999988764    445679999999776421


Q ss_pred             CCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccccc--ccc--eeeccCCcccCCCCCHHH
Q 016901          219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE--THN--ITLSQEDTLFGGQVSNLQ  287 (380)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~--~~~--~~~~~~~~~~~~~i~~~D  287 (380)
                      +     ......|+.+|.+.+.+.+       ..|+++++|+||++.+|......  ...  ..........+.+.+++|
T Consensus       152 ~-----~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~ped  226 (280)
T 3tox_A          152 G-----FAGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIARPEE  226 (280)
T ss_dssp             C-----CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTSTTSSCBCHHH
T ss_pred             C-----CCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCccCCCcCHHH
Confidence            1     1234579999999997765       26899999999999988532110  000  000111122345789999


Q ss_pred             HHHHHHHHHhCCC-CccCcEEEEecCCCCCc
Q 016901          288 VAELLACMAKNRS-LSYCKVVEVIAETTAPL  317 (380)
Q Consensus       288 vA~~i~~~l~~~~-~~~~~~~ni~~~~~~s~  317 (380)
                      +|++++.++.+.. ...|+++++.+|...+.
T Consensus       227 vA~~v~~L~s~~a~~itG~~i~vdGG~~~~~  257 (280)
T 3tox_A          227 IAEAALYLASDGASFVTGAALLADGGASVTK  257 (280)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred             HHHHHHHHhCccccCCcCcEEEECCCccccc
Confidence            9999999997643 35799999999876544

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.93  E-value=5.1e-25  Score=202.71  Aligned_cols=207  Identities=14%  Similarity=0.124  Sum_probs=156.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++|+||||||+|+||++++++|+++|++|++++|+.++...                      .++.++.+|++|++++
T Consensus        26 ~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~----------------------~~~~~~~~Dv~d~~~v   83 (260)
T 3un1_A           26 NQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSAD----------------------PDIHTVAGDISKPETA   83 (260)
T ss_dssp             TTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSS----------------------TTEEEEESCTTSHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc----------------------CceEEEEccCCCHHHH
Confidence            467899999999999999999999999999999998654211                      4789999999999988


Q ss_pred             HHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCCCC
Q 016901          158 EPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~~~  220 (380)
                      +++++       ++|+||||||......      .++...+++|+.|+.++++++    ++.+.++||++||....... 
T Consensus        84 ~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-  162 (260)
T 3un1_A           84 DRIVREGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPM-  162 (260)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCB-
T ss_pred             HHHHHHHHHHCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCC-
Confidence            87764       7999999999653221      123344789999999999887    56677899999997653211 


Q ss_pred             chhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHH
Q 016901          221 PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA  293 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~  293 (380)
                         ...+...|+.+|.+.+.+.+.       .|+++++|+||++++|......   ..........+.+.+++|+|++++
T Consensus       163 ---~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~---~~~~~~~~p~~r~~~~~dva~av~  236 (260)
T 3un1_A          163 ---VGMPSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAET---HSTLAGLHPVGRMGEIRDVVDAVL  236 (260)
T ss_dssp             ---TTCCCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGGG---HHHHHTTSTTSSCBCHHHHHHHHH
T ss_pred             ---CCCccHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHHH---HHHHhccCCCCCCcCHHHHHHHHH
Confidence               112345799999999988762       5899999999999998542110   111111223346789999999999


Q ss_pred             HHHhCCCCccCcEEEEecCCC
Q 016901          294 CMAKNRSLSYCKVVEVIAETT  314 (380)
Q Consensus       294 ~~l~~~~~~~~~~~ni~~~~~  314 (380)
                      .+.... ...|++|++.+|..
T Consensus       237 ~L~~~~-~itG~~i~vdGG~~  256 (260)
T 3un1_A          237 YLEHAG-FITGEILHVDGGQN  256 (260)
T ss_dssp             HHHHCT-TCCSCEEEESTTGG
T ss_pred             HhcccC-CCCCcEEEECCCee
Confidence            985544 36799999988864

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.93  E-value=1.6e-24  Score=200.88  Aligned_cols=216  Identities=17%  Similarity=0.125  Sum_probs=157.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-CchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCCh--
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVR-SVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR--  154 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~--  154 (380)
                      +++|++|||||+|+||++++++|+++|++|++++| +.++.+++.+.+....        +    .++.++.+|++|.  
T Consensus         9 ~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--------~----~~~~~~~~Dl~~~~~   76 (276)
T 1mxh_A            9 SECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAAR--------A----GSAVLCKGDLSLSSS   76 (276)
T ss_dssp             --CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS--------T----TCEEEEECCCSSSTT
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhc--------C----CceEEEeccCCCccc
Confidence            46789999999999999999999999999999999 8877776665554320        1    5688999999999  


Q ss_pred             --hcHHHHhc-------CCCEEEEccccCcccc-----------------CCCCCcchhhHHHHHHHHHHHHHc---CC-
Q 016901          155 --VQIEPALG-------NASVVICCIGASEKEV-----------------FDITGPYRIDFQATKNLVDAATIA---KV-  204 (380)
Q Consensus       155 --~~~~~a~~-------~~d~Vi~~Ag~~~~~~-----------------~~~~~~~~~nv~g~~~ll~a~~~~---~v-  204 (380)
                        ++++++++       ++|+||||||......                 .++...+++|+.|+.++++++...   +. 
T Consensus        77 ~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~  156 (276)
T 1mxh_A           77 LLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGA  156 (276)
T ss_dssp             HHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-----
T ss_pred             cHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCC
Confidence              88877764       7999999999653221                 112234789999999999998763   34 


Q ss_pred             -----CEEEEEccCCCCCCCCchhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcccccccceee
Q 016901          205 -----NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITL  272 (380)
Q Consensus       205 -----~r~V~~SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~~~~~~~  272 (380)
                           ++||++||.......      .....|+.+|.+.+.+.+.       .|+++++|+||++++| ..........+
T Consensus       157 ~~~~~g~iv~isS~~~~~~~------~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~~~~~~~~~~~  229 (276)
T 1mxh_A          157 WRSRNLSVVNLCDAMTDLPL------PGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-PAMPQETQEEY  229 (276)
T ss_dssp             --CCCEEEEEECCGGGGSCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-SSSCHHHHHHH
T ss_pred             CCCCCcEEEEECchhhcCCC------CCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-ccCCHHHHHHH
Confidence                 799999997664321      2345799999999977652       5899999999999998 22111000001


Q ss_pred             ccCCcccCC-CCCHHHHHHHHHHHHhCCC-CccCcEEEEecCC
Q 016901          273 SQEDTLFGG-QVSNLQVAELLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       273 ~~~~~~~~~-~i~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      .. ....+. +.+++|+|++++.++.+.. ...|++|++.+|.
T Consensus       230 ~~-~~p~~r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~  271 (276)
T 1mxh_A          230 RR-KVPLGQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGL  271 (276)
T ss_dssp             HT-TCTTTSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             Hh-cCCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCch
Confidence            11 112234 7899999999999997643 3468899988874

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.93  E-value=4.6e-25  Score=206.28  Aligned_cols=220  Identities=16%  Similarity=0.060  Sum_probs=160.2

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh
Q 016901           76 DSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (380)
Q Consensus        76 ~~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~  155 (380)
                      ..+++|+|+||||+|+||++++++|+++|++|++++|+.++.+...+.+                ..+++++.+|++|.+
T Consensus        12 ~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~----------------~~~~~~~~~Dl~d~~   75 (291)
T 3rd5_A           12 PSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM----------------AGQVEVRELDLQDLS   75 (291)
T ss_dssp             CCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS----------------SSEEEEEECCTTCHH
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----------------cCCeeEEEcCCCCHH
Confidence            4457899999999999999999999999999999999988776654311                157999999999999


Q ss_pred             cHHHHhc---CCCEEEEccccCcc----ccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCC-------c
Q 016901          156 QIEPALG---NASVVICCIGASEK----EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF-------P  221 (380)
Q Consensus       156 ~~~~a~~---~~d~Vi~~Ag~~~~----~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~-------~  221 (380)
                      +++++++   ++|+||||||....    ...+++..+++|+.|+.++++++.....+|||++||........       .
T Consensus        76 ~v~~~~~~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~~~~~~~  155 (291)
T 3rd5_A           76 SVRRFADGVSGADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINLEDLNWR  155 (291)
T ss_dssp             HHHHHHHTCCCEEEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCSSCTTCS
T ss_pred             HHHHHHHhcCCCCEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCccccccc
Confidence            9998886   57999999996532    22344556899999999999999888778999999976532211       1


Q ss_pred             hhhhchhhHHHHHHHHHHHHHH-------HCC--CCEEEEecCcccCCCcccccccceeeccCCcccCC-CCCHHHHHHH
Q 016901          222 AAILNLFWGVLLWKRKAEEALI-------ASG--LPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGG-QVSNLQVAEL  291 (380)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~g--~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~-~i~~~DvA~~  291 (380)
                      .....+...|+.+|.+.+.+.+       ..|  ++++.|+||.+.++............... ...+. ..+++|+|+.
T Consensus       156 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~A~~  234 (291)
T 3rd5_A          156 SRRYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKLGDALMS-AATRVVATDADFGARQ  234 (291)
T ss_dssp             SSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC---------------------CHHHHHHHHH
T ss_pred             ccCCCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchHHHHHHHH-HHHHHHhCCHHHHHHH
Confidence            1223456789999999987765       245  99999999999887432111000000000 11111 2358999999


Q ss_pred             HHHHHhCCCCccCcEEEEecCC
Q 016901          292 LACMAKNRSLSYCKVVEVIAET  313 (380)
Q Consensus       292 i~~~l~~~~~~~~~~~ni~~~~  313 (380)
                      ++.++.++ ...|++|++.+|.
T Consensus       235 ~~~l~~~~-~~~G~~~~vdgG~  255 (291)
T 3rd5_A          235 TLYAASQD-LPGDSFVGPRFGY  255 (291)
T ss_dssp             HHHHHHSC-CCTTCEEEETTSS
T ss_pred             HHHHHcCC-CCCCceeCCcccc
Confidence            99999985 4678888886654

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.93  E-value=6.2e-25  Score=202.00  Aligned_cols=218  Identities=14%  Similarity=0.059  Sum_probs=156.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchh-HHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR-AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      +++|+||||||+|+||++++++|+++|++|++++|+.++ .+++.+.+....        +    .++.++.+|++|.++
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--------~----~~~~~~~~D~~~~~~   69 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQH--------G----VKVLYDGADLSKGEA   69 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHH--------T----SCEEEECCCTTSHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhcc--------C----CcEEEEECCCCCHHH
Confidence            357899999999999999999999999999999999876 666555443210        1    568899999999988


Q ss_pred             HHHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCCC
Q 016901          157 IEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       157 ~~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~~  219 (380)
                      ++++++       ++|+||||||......      .++...+++|+.|+.++++++.    +.+.++||++||.......
T Consensus        70 v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  149 (260)
T 1x1t_A           70 VRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVAS  149 (260)
T ss_dssp             HHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCC
Confidence            887764       7999999999653211      1233457899999998888774    4567899999998663321


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcccccc-----------cce-eeccCCcccC
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-----------HNI-TLSQEDTLFG  280 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~~-----------~~~-~~~~~~~~~~  280 (380)
                            .....|+.+|.+.+.+.+.       .|+++++|+||++.+|.......           ... .+.......+
T Consensus       150 ------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~  223 (260)
T 1x1t_A          150 ------ANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSL  223 (260)
T ss_dssp             ------TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTC
T ss_pred             ------CCCchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhccCCCC
Confidence                  2345799999999987752       58999999999999885321100           000 0000011234


Q ss_pred             CCCCHHHHHHHHHHHHhCCC-CccCcEEEEecCC
Q 016901          281 GQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       281 ~~i~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      .+.+++|+|++++.++.... ...|++|++.+|.
T Consensus       224 ~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgG~  257 (260)
T 1x1t_A          224 QFVTPEQLGGTAVFLASDAAAQITGTTVSVDGGW  257 (260)
T ss_dssp             CCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CCcCHHHHHHHHHHHhChhhcCCCCCEEEECCCc
Confidence            57899999999999997642 3468899988774

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.93  E-value=2.3e-24  Score=200.59  Aligned_cols=219  Identities=14%  Similarity=0.077  Sum_probs=158.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-CchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVR-SVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~  155 (380)
                      ++++|++|||||+|+||++++++|+++|++|++++| +.+..+.+.+.+...            ...++.++.+|++|.+
T Consensus        22 ~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~------------~~~~~~~~~~Dv~d~~   89 (281)
T 3v2h_A           22 SMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGL------------SSGTVLHHPADMTKPS   89 (281)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTT------------CSSCEEEECCCTTCHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhc------------cCCcEEEEeCCCCCHH
Confidence            456789999999999999999999999999999999 555566555544322            1157899999999998


Q ss_pred             cHHHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCC
Q 016901          156 QIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKF  218 (380)
Q Consensus       156 ~~~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~  218 (380)
                      +++++++       ++|+||||||......      .++...+++|+.|+.++++++    ++.+.++||++||......
T Consensus        90 ~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~  169 (281)
T 3v2h_A           90 EIADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVA  169 (281)
T ss_dssp             HHHHHHHHHHHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC
T ss_pred             HHHHHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccC
Confidence            8887764       7999999999653222      123345889999999999887    4556679999999766432


Q ss_pred             CCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccc------------eeeccCCccc
Q 016901          219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHN------------ITLSQEDTLF  279 (380)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~------------~~~~~~~~~~  279 (380)
                      .      .....|+.+|.+.+.+.+       ..|+++++|+||++.+|.........            ..........
T Consensus       170 ~------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~  243 (281)
T 3v2h_A          170 S------PFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPT  243 (281)
T ss_dssp             C------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------CCTT
T ss_pred             C------CCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCC
Confidence            1      233579999999998765       26899999999999987432110000            0001112233


Q ss_pred             CCCCCHHHHHHHHHHHHhCCC-CccCcEEEEecCC
Q 016901          280 GGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       280 ~~~i~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      +.+++++|+|++++.++.+.. ...|+++++.+|.
T Consensus       244 ~r~~~~edvA~~v~~L~s~~a~~itG~~i~vdGG~  278 (281)
T 3v2h_A          244 KKFITVEQVASLALYLAGDDAAQITGTHVSMDGGW  278 (281)
T ss_dssp             CSCBCHHHHHHHHHHHHSSGGGGCCSCEEEESTTG
T ss_pred             CCccCHHHHHHHHHHHcCCCcCCCCCcEEEECCCc
Confidence            467999999999999997653 3468999998874

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.93  E-value=1.2e-25  Score=204.25  Aligned_cols=215  Identities=14%  Similarity=0.091  Sum_probs=153.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-eCCchhHHHHHHHHHhhhhcccccccCCCCCCceEE-EEcCCCChhcH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAG-VRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLEL-VECDLEKRVQI  157 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l-~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~Dl~d~~~~  157 (380)
                      +|+|+||||+|+||++++++|+++|++|+++ .|+.++.+.+.+.+...+             .++.+ +.+|++|.+++
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~~   67 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRG-------------SPLVAVLGANLLEAEAA   67 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTT-------------CSCEEEEECCTTSHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC-------------CceEEEEeccCCCHHHH
Confidence            3689999999999999999999999999998 788877766655444321             45666 89999999888


Q ss_pred             HHHh-------cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHH----HHHHHcCCCEEEEEccCCCCCCCC
Q 016901          158 EPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLV----DAATIAKVNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       158 ~~a~-------~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll----~a~~~~~v~r~V~~SS~~~~~~~~  220 (380)
                      ++++       +++|+||||||......      .++...+++|+.|+.+++    +.+++.+.++||++||....... 
T Consensus        68 ~~~~~~~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-  146 (245)
T 2ph3_A           68 TALVHQAAEVLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGN-  146 (245)
T ss_dssp             HHHHHHHHHHHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC-
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCC-
Confidence            8775       47999999999653221      123345789999955554    55556678899999997542111 


Q ss_pred             chhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHH
Q 016901          221 PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA  293 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~  293 (380)
                           .....|+.+|.+.+.+.+.       .|+++++||||+++++...................+.+++++|+|++++
T Consensus       147 -----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  221 (245)
T 2ph3_A          147 -----PGQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERLPQEVKEAYLKQIPAGRFGRPEEVAEAVA  221 (245)
T ss_dssp             -----SSBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHHTCTTCSCBCHHHHHHHHH
T ss_pred             -----CCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence                 2345799999998877652       5899999999999987432100000000000112245789999999999


Q ss_pred             HHHhCCC-CccCcEEEEecCC
Q 016901          294 CMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       294 ~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      .++.++. ...|++|++.++.
T Consensus       222 ~l~~~~~~~~~G~~~~v~gg~  242 (245)
T 2ph3_A          222 FLVSEKAGYITGQTLCVDGGL  242 (245)
T ss_dssp             HHTSGGGTTCCSCEEEESTTC
T ss_pred             HHhCcccccccCCEEEECCCC
Confidence            9997643 2458899998875

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.93  E-value=1.4e-24  Score=200.82  Aligned_cols=216  Identities=16%  Similarity=0.127  Sum_probs=161.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-CchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVR-SVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      +++|+||||||+|+||++++++|+++|++|+++.| +....+.+.+.+...+             .++.++.+|++|.++
T Consensus        26 l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~D~~d~~~   92 (269)
T 4dmm_A           26 LTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAG-------------GEAFAVKADVSQESE   92 (269)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-------------CCEEEEECCTTSHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcC-------------CcEEEEECCCCCHHH
Confidence            46789999999999999999999999999999988 5556666655554432             578999999999988


Q ss_pred             HHHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCCC
Q 016901          157 IEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       157 ~~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~~  219 (380)
                      ++++++       ++|+||||||......      .++...+++|+.|+.++++++    ++.+.++||++||...... 
T Consensus        93 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-  171 (269)
T 4dmm_A           93 VEALFAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMG-  171 (269)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHC-
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCC-
Confidence            887764       7999999999653321      223445889999999998876    3456679999999754221 


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHH
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELL  292 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i  292 (380)
                           ......|+.+|.+.+.+.+       ..|+++++|+||++.++.......   .........+.+.+++|+|+++
T Consensus       172 -----~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~---~~~~~~~p~~r~~~~~dvA~~v  243 (269)
T 4dmm_A          172 -----NPGQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSELAA---EKLLEVIPLGRYGEAAEVAGVV  243 (269)
T ss_dssp             -----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHHHH---HHHGGGCTTSSCBCHHHHHHHH
T ss_pred             -----CCCchhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccccH---HHHHhcCCCCCCCCHHHHHHHH
Confidence                 1234579999999987765       268999999999999885321111   0001112234578999999999


Q ss_pred             HHHHhCCC--CccCcEEEEecCCCC
Q 016901          293 ACMAKNRS--LSYCKVVEVIAETTA  315 (380)
Q Consensus       293 ~~~l~~~~--~~~~~~~ni~~~~~~  315 (380)
                      +.++.++.  ...|++|++.+|...
T Consensus       244 ~~l~s~~~~~~itG~~i~vdGG~~~  268 (269)
T 4dmm_A          244 RFLAADPAAAYITGQVINIDGGLVM  268 (269)
T ss_dssp             HHHHHCGGGGGCCSCEEEESTTSCC
T ss_pred             HHHhCCcccCCCcCCEEEECCCeec
Confidence            99998742  356899999888643

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.93  E-value=1.9e-24  Score=200.31  Aligned_cols=217  Identities=17%  Similarity=0.136  Sum_probs=157.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++++++||||+|+||++++++|+++|++|++++|+.++.++..+.+...+             .++.++.+|++|.+++
T Consensus        19 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~D~~~~~~~   85 (273)
T 1ae1_A           19 LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKG-------------LNVEGSVCDLLSRTER   85 (273)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------------CCEEEEECCTTCHHHH
T ss_pred             CCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------------CceEEEECCCCCHHHH
Confidence            467899999999999999999999999999999999887776665554321             5688999999999888


Q ss_pred             HHHh--------cCCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCCC
Q 016901          158 EPAL--------GNASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       158 ~~a~--------~~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~~  219 (380)
                      ++++        +++|+||||||.......      ++...+++|+.|+.++++++.    +.+.++||++||.......
T Consensus        86 ~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~  165 (273)
T 1ae1_A           86 DKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSAL  165 (273)
T ss_dssp             HHHHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCC
T ss_pred             HHHHHHHHHHcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCC
Confidence            8776        579999999996532211      223347799999999998873    4566899999998764321


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcccccc----c-ce-eeccCCcccCCCCCHH
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET----H-NI-TLSQEDTLFGGQVSNL  286 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~~----~-~~-~~~~~~~~~~~~i~~~  286 (380)
                            .....|+.+|.+.+.+.+.       .|+++++|+||++++|.......    . .. .........+.+.+++
T Consensus       166 ------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~  239 (273)
T 1ae1_A          166 ------PSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQ  239 (273)
T ss_dssp             ------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHH
T ss_pred             ------CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCCCCCCcCHH
Confidence                  2345799999999987652       59999999999999885321100    0 00 0000011223578999


Q ss_pred             HHHHHHHHHHhCCC-CccCcEEEEecCC
Q 016901          287 QVAELLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       287 DvA~~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      |+|++++.++.... ...|+++++.+|.
T Consensus       240 dvA~~v~~l~s~~~~~~tG~~i~vdGG~  267 (273)
T 1ae1_A          240 EVSALIAFLCFPAASYITGQIIWADGGF  267 (273)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHHhCccccCcCCCEEEECCCc
Confidence            99999999987543 3468999988875

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.93  E-value=1.1e-24  Score=202.68  Aligned_cols=218  Identities=12%  Similarity=0.115  Sum_probs=151.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-CchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVR-SVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      +.++++|||||+|+||++++++|+++|++|++++| +.+..++..+.+...+             .++.++++|++|.++
T Consensus        27 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~Dv~d~~~   93 (280)
T 4da9_A           27 KARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLG-------------ARVIFLRADLADLSS   93 (280)
T ss_dssp             CCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTT-------------CCEEEEECCTTSGGG
T ss_pred             cCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcC-------------CcEEEEEecCCCHHH
Confidence            46789999999999999999999999999999986 6666666665554322             579999999999998


Q ss_pred             HHHHhc-------CCCEEEEccccCc--c------ccCCCCCcchhhHHHHHHHHHHHHH----cC---CCEEEEEccCC
Q 016901          157 IEPALG-------NASVVICCIGASE--K------EVFDITGPYRIDFQATKNLVDAATI----AK---VNHFIMVSSLG  214 (380)
Q Consensus       157 ~~~a~~-------~~d~Vi~~Ag~~~--~------~~~~~~~~~~~nv~g~~~ll~a~~~----~~---v~r~V~~SS~~  214 (380)
                      ++++++       ++|+||||||...  .      ...++...+++|+.|+.++++++..    .+   .++||++||..
T Consensus        94 v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~  173 (280)
T 4da9_A           94 HQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVS  173 (280)
T ss_dssp             HHHHHHHHHHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchh
Confidence            887774       7999999999731  1      1123344578999999988887643    23   45899999976


Q ss_pred             CCCCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccce-eeccCCcccCCCCCHH
Q 016901          215 TNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNI-TLSQEDTLFGGQVSNL  286 (380)
Q Consensus       215 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~-~~~~~~~~~~~~i~~~  286 (380)
                      ....      ......|+.+|.+.+.+.+       ..|+++++|+||++.++.......... .........+.+.+++
T Consensus       174 ~~~~------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pe  247 (280)
T 4da9_A          174 AVMT------SPERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSGKYDGLIESGLVPMRRWGEPE  247 (280)
T ss_dssp             ------------CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC----------------------CCBCHH
T ss_pred             hccC------CCCccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcchhHHHHHhhcCCCcCCcCCHH
Confidence            6332      1233579999999997765       278999999999999874321111000 1111122334578999


Q ss_pred             HHHHHHHHHHhCCC-CccCcEEEEecCCC
Q 016901          287 QVAELLACMAKNRS-LSYCKVVEVIAETT  314 (380)
Q Consensus       287 DvA~~i~~~l~~~~-~~~~~~~ni~~~~~  314 (380)
                      |+|++++.++.+.. ...|+++++.+|..
T Consensus       248 dvA~~v~~L~s~~~~~itG~~i~vdGG~~  276 (280)
T 4da9_A          248 DIGNIVAGLAGGQFGFATGSVIQADGGLS  276 (280)
T ss_dssp             HHHHHHHHHHTSTTGGGTTCEEEESTTCC
T ss_pred             HHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence            99999999998654 34689999988864

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.93  E-value=1.1e-24  Score=200.34  Aligned_cols=218  Identities=15%  Similarity=0.179  Sum_probs=162.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-eCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAG-VRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l-~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      ++|++|||||+|+||++++++|+++|++|+++ .|+.+..++..+.+...+             .++.++.+|++|.+++
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~Dv~~~~~v   69 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLG-------------VKVLVVKANVGQPAKI   69 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTT-------------CCEEEEECCTTCHHHH
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC-------------CcEEEEEcCCCCHHHH
Confidence            57899999999999999999999999999996 888887777766655432             5799999999999888


Q ss_pred             HHHh-------cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCCCC
Q 016901          158 EPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       158 ~~a~-------~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~~~  220 (380)
                      ++++       +++|+||||||......      .++...+++|+.|+.++++++    ++.+.++||++||.+....  
T Consensus        70 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~--  147 (258)
T 3oid_A           70 KEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRY--  147 (258)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSB--
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCC--
Confidence            7776       46899999998543221      123334789999999998887    4455679999999876432  


Q ss_pred             chhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCccccccc-c-eeeccCCcccCCCCCHHHHHHH
Q 016901          221 PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETH-N-ITLSQEDTLFGGQVSNLQVAEL  291 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~~~-~-~~~~~~~~~~~~~i~~~DvA~~  291 (380)
                          ......|+.+|.+.+.+.+.       .|+++++|+||++.++........ . ..........+.+.+++|+|++
T Consensus       148 ----~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~  223 (258)
T 3oid_A          148 ----LENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEIKDMVDT  223 (258)
T ss_dssp             ----CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHCTTSSCBCHHHHHHH
T ss_pred             ----CCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence                23346799999999988762       589999999999988743211100 0 0000111223457899999999


Q ss_pred             HHHHHhCCC-CccCcEEEEecCCCC
Q 016901          292 LACMAKNRS-LSYCKVVEVIAETTA  315 (380)
Q Consensus       292 i~~~l~~~~-~~~~~~~ni~~~~~~  315 (380)
                      ++.++.+.. ...|+++++.+|...
T Consensus       224 v~~L~s~~~~~itG~~i~vdGG~~~  248 (258)
T 3oid_A          224 VEFLVSSKADMIRGQTIIVDGGRSL  248 (258)
T ss_dssp             HHHHTSSTTTTCCSCEEEESTTGGG
T ss_pred             HHHHhCcccCCccCCEEEECCCccC
Confidence            999998653 357999999888644

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.93  E-value=1e-24  Score=199.07  Aligned_cols=216  Identities=13%  Similarity=0.069  Sum_probs=156.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++++|+||||+|+||++++++|+++|++|++++|+.++.+...+.+..              ..++.++.+|++|.+++
T Consensus         4 ~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--------------~~~~~~~~~D~~~~~~~   69 (251)
T 1zk4_A            4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT--------------PDQIQFFQHDSSDEDGW   69 (251)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC--------------TTTEEEEECCTTCHHHH
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc--------------cCceEEEECCCCCHHHH
Confidence            4678999999999999999999999999999999998776655443321              14689999999999888


Q ss_pred             HHHhc-------CCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHH----HHcCC-CEEEEEccCCCCCCC
Q 016901          158 EPALG-------NASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAA----TIAKV-NHFIMVSSLGTNKFG  219 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~----~~~~v-~r~V~~SS~~~~~~~  219 (380)
                      .++++       ++|+||||||.......      ++...+++|+.|+.++++++    ++.+. ++||++||.......
T Consensus        70 ~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~  149 (251)
T 1zk4_A           70 TKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGD  149 (251)
T ss_dssp             HHHHHHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCC
T ss_pred             HHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCC
Confidence            87764       59999999996532211      22334789999877766554    45566 799999998664321


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHH---------HCCCCEEEEecCcccCCCcccccccce-eeccCCcccCCCCCHHHHH
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALI---------ASGLPYTIVRPGGMERPTDAYKETHNI-TLSQEDTLFGGQVSNLQVA  289 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~---------~~g~~~~ivRpg~v~gp~~~~~~~~~~-~~~~~~~~~~~~i~~~DvA  289 (380)
                            .....|+.+|.+.|.+++         ..|+++++||||++++|.......... .........+.+++++|+|
T Consensus       150 ------~~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  223 (251)
T 1zk4_A          150 ------PSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIA  223 (251)
T ss_dssp             ------TTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHTSTTTCTTSSCBCHHHHH
T ss_pred             ------CCCccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcCchhhhHHHhhcCCCCCCcCHHHHH
Confidence                  234579999999987764         368999999999999874321110000 0001112234578999999


Q ss_pred             HHHHHHHhCCC-CccCcEEEEecCC
Q 016901          290 ELLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       290 ~~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      ++++.++.++. ...|++|++.+|.
T Consensus       224 ~~~~~l~~~~~~~~~G~~~~v~gG~  248 (251)
T 1zk4_A          224 YICVYLASNESKFATGSEFVVDGGY  248 (251)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHcCcccccccCcEEEECCCc
Confidence            99999997643 3468899998875

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.93  E-value=1.5e-24  Score=199.05  Aligned_cols=214  Identities=12%  Similarity=0.048  Sum_probs=155.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .+++|++|||||+|+||++++++|+++|++|++++|+.++ ++..+.+                 .+ .++.+|++|.++
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~-----------------~~-~~~~~D~~~~~~   63 (256)
T 2d1y_A            3 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAI-----------------GG-AFFQVDLEDERE   63 (256)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHH-----------------TC-EEEECCTTCHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHh-----------------hC-CEEEeeCCCHHH
Confidence            3567899999999999999999999999999999999876 4443211                 23 788999999988


Q ss_pred             HHHHh-------cCCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCCC
Q 016901          157 IEPAL-------GNASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       157 ~~~a~-------~~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~~  219 (380)
                      +++++       +++|+||||||.......      ++...+++|+.|+.++++++.    +.+.++||++||.......
T Consensus        64 ~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~  143 (256)
T 2d1y_A           64 RVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAE  143 (256)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCC
Confidence            87766       379999999996532211      223457899999999988774    3567899999997653211


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccc------cccceeeccCCcccCCCCCHH
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK------ETHNITLSQEDTLFGGQVSNL  286 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~------~~~~~~~~~~~~~~~~~i~~~  286 (380)
                            .....|+.+|.+.+.+.+       ..|+++++|+||++.++.....      ..............+.+++++
T Consensus       144 ------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (256)
T 2d1y_A          144 ------QENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPE  217 (256)
T ss_dssp             ------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHH
T ss_pred             ------CCChhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhccccccCCHHHHHHHHhcCCCCCCcCHH
Confidence                  234579999999998775       2689999999999987632110      000000001111234578999


Q ss_pred             HHHHHHHHHHhCCC-CccCcEEEEecCCCC
Q 016901          287 QVAELLACMAKNRS-LSYCKVVEVIAETTA  315 (380)
Q Consensus       287 DvA~~i~~~l~~~~-~~~~~~~ni~~~~~~  315 (380)
                      |+|++++.++.++. ...|++|++.++...
T Consensus       218 dvA~~~~~l~s~~~~~~~G~~~~v~gG~~~  247 (256)
T 2d1y_A          218 EVAEAVLFLASEKASFITGAILPVDGGMTA  247 (256)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHHhCchhcCCCCCEEEECCCccc
Confidence            99999999997653 346889999988644

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.93  E-value=1e-24  Score=203.20  Aligned_cols=227  Identities=14%  Similarity=0.091  Sum_probs=162.2

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC------------chhHHHHHHHHHhhhhcccccccCCCCCC
Q 016901           75 ADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS------------VQRAENLVQSVKQMKLDGELANKGIQPVE  142 (380)
Q Consensus        75 ~~~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (380)
                      |..+++|+||||||+|+||++++++|+++|++|++++|+            ....+.....+...+             .
T Consensus         5 m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~   71 (287)
T 3pxx_A            5 MGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG-------------R   71 (287)
T ss_dssp             CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT-------------S
T ss_pred             ccccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcC-------------C
Confidence            445678999999999999999999999999999999987            444444444333321             6


Q ss_pred             ceEEEEcCCCChhcHHHHhc-------CCCEEEEccccCccc----cCCCCCcchhhHHHHHHHHHHHHHcC--CCEEEE
Q 016901          143 MLELVECDLEKRVQIEPALG-------NASVVICCIGASEKE----VFDITGPYRIDFQATKNLVDAATIAK--VNHFIM  209 (380)
Q Consensus       143 ~v~~~~~Dl~d~~~~~~a~~-------~~d~Vi~~Ag~~~~~----~~~~~~~~~~nv~g~~~ll~a~~~~~--v~r~V~  209 (380)
                      ++.++.+|++|.++++++++       ++|+||||||.....    ..++...+++|+.|+.++++++...-  ..+||+
T Consensus        72 ~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~  151 (287)
T 3pxx_A           72 KAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIIT  151 (287)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEE
T ss_pred             ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEE
Confidence            79999999999988887764       799999999975432    12233458899999999999997642  358999


Q ss_pred             EccCCCCC-----CCCchhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCccccc-------c--c
Q 016901          210 VSSLGTNK-----FGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE-------T--H  268 (380)
Q Consensus       210 ~SS~~~~~-----~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~-------~--~  268 (380)
                      +||.....     .............|+.+|.+.+.+.+.       .|+++++|+||++.++......       .  .
T Consensus       152 isS~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~  231 (287)
T 3pxx_A          152 TGSVAGLIAAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEA  231 (287)
T ss_dssp             ECCHHHHHHHHCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSS
T ss_pred             eccchhcccccccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhcccccc
Confidence            99964421     111111224456799999999987652       5999999999999988532100       0  0


Q ss_pred             ce------eeccCCcccCCCCCHHHHHHHHHHHHhCC-CCccCcEEEEecCCC
Q 016901          269 NI------TLSQEDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAETT  314 (380)
Q Consensus       269 ~~------~~~~~~~~~~~~i~~~DvA~~i~~~l~~~-~~~~~~~~ni~~~~~  314 (380)
                      ..      .........+.+.+++|+|++++.++.+. ....|+++++.+|..
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~~  284 (287)
T 3pxx_A          232 PSRADALLAFPAMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAM  284 (287)
T ss_dssp             CCHHHHHHHGGGGCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             chhHHHHhhhhhhcccCCCCCCHHHHHhhHheecchhhcCCCCceEeECchhh
Confidence            00      00011122256789999999999999754 335789999988853

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.93  E-value=4.7e-24  Score=198.31  Aligned_cols=219  Identities=16%  Similarity=0.080  Sum_probs=159.6

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-------------CchhHHHHHHHHHhhhhcccccccCCCCCC
Q 016901           76 DSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVR-------------SVQRAENLVQSVKQMKLDGELANKGIQPVE  142 (380)
Q Consensus        76 ~~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (380)
                      ..+++|++|||||+|+||++++++|+++|++|++++|             +.++.++..+.+...+             .
T Consensus        11 ~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~   77 (280)
T 3pgx_A           11 GSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQG-------------R   77 (280)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTT-------------C
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcC-------------C
Confidence            3457899999999999999999999999999999998             4555555555444321             6


Q ss_pred             ceEEEEcCCCChhcHHHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHH----HcC-C
Q 016901          143 MLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAK-V  204 (380)
Q Consensus       143 ~v~~~~~Dl~d~~~~~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~----~~~-v  204 (380)
                      ++.++.+|++|.++++++++       ++|+||||||......      .++...+++|+.|+.++++++.    +.+ .
T Consensus        78 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~  157 (280)
T 3pgx_A           78 KALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNG  157 (280)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSC
T ss_pred             eEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCC
Confidence            78999999999988887763       7999999999754221      1233457899999999988873    333 5


Q ss_pred             CEEEEEccCCCCCCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccccc------ccce-
Q 016901          205 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE------THNI-  270 (380)
Q Consensus       205 ~r~V~~SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~------~~~~-  270 (380)
                      ++||++||.......      .....|+.+|.+.+.+.+       .+|+++++|+||++++|......      .... 
T Consensus       158 g~iv~isS~~~~~~~------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~  231 (280)
T 3pgx_A          158 GSIVVVSSSAGLKAT------PGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSF  231 (280)
T ss_dssp             EEEEEECCGGGTSCC------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGGG
T ss_pred             CEEEEEcchhhccCC------CCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCchh
Confidence            689999997664321      234579999999997765       27899999999999998532100      0000 


Q ss_pred             --eeccCCcccCCCCCHHHHHHHHHHHHhCCC-CccCcEEEEecCC
Q 016901          271 --TLSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       271 --~~~~~~~~~~~~i~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                        .+.........+++++|+|++++.++.+.. ...|+++++.+|.
T Consensus       232 ~~~~~~~~~~~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  277 (280)
T 3pgx_A          232 VHSFPPMPVQPNGFMTADEVADVVAWLAGDGSGTLTGTQIPVDKGA  277 (280)
T ss_dssp             GGGSCCBTTBCSSCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTTG
T ss_pred             hhhhhhcccCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence              000111112257899999999999997643 3468999988774

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.93  E-value=5.9e-26  Score=207.85  Aligned_cols=218  Identities=14%  Similarity=0.094  Sum_probs=158.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC-chhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS-VQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      +++|+||||||+|+||++++++|+++|++|++++|+ .++.+.+.+.+...+             .++.++.+|++|.++
T Consensus         5 l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-------------~~~~~~~~D~~~~~~   71 (258)
T 3afn_B            5 LKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADG-------------GDAAFFAADLATSEA   71 (258)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTT-------------CEEEEEECCTTSHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcC-------------CceEEEECCCCCHHH
Confidence            467899999999999999999999999999999998 777766655554321             578999999999998


Q ss_pred             HHHHhc-------CCCEEEEcccc-Ccccc------CCCCCcchhhHHHHHHHHHHHH----HcC--C---CEEEEEccC
Q 016901          157 IEPALG-------NASVVICCIGA-SEKEV------FDITGPYRIDFQATKNLVDAAT----IAK--V---NHFIMVSSL  213 (380)
Q Consensus       157 ~~~a~~-------~~d~Vi~~Ag~-~~~~~------~~~~~~~~~nv~g~~~ll~a~~----~~~--v---~r~V~~SS~  213 (380)
                      ++++++       ++|+||||||. .....      .++...+++|+.|+.++++++.    +.+  .   ++||++||.
T Consensus        72 ~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~  151 (258)
T 3afn_B           72 CQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSI  151 (258)
T ss_dssp             HHHHHHHHHHHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCT
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecch
Confidence            888875       89999999996 32111      1123347899999999888664    222  2   689999997


Q ss_pred             CCCCCCCchhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHH
Q 016901          214 GTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNL  286 (380)
Q Consensus       214 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~  286 (380)
                      .....+     ..+...|+.+|.+.|.+++.       .|+++++||||+++++...................+.+++++
T Consensus       152 ~~~~~~-----~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (258)
T 3afn_B          152 AGHTGG-----GPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKTQDVRDRISNGIPMGRFGTAE  226 (258)
T ss_dssp             HHHHCC-----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTCCHHHHHHHHTTCTTCSCBCGG
T ss_pred             hhccCC-----CCCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccccCHHHHHHHhccCCCCcCCCHH
Confidence            542211     12345799999999988752       589999999999998853211000000001112234578999


Q ss_pred             HHHHHHHHHHhCCC--CccCcEEEEecCC
Q 016901          287 QVAELLACMAKNRS--LSYCKVVEVIAET  313 (380)
Q Consensus       287 DvA~~i~~~l~~~~--~~~~~~~ni~~~~  313 (380)
                      |+|++++.++.++.  ...|++|++.++.
T Consensus       227 dva~~~~~l~~~~~~~~~~G~~~~v~gg~  255 (258)
T 3afn_B          227 EMAPAFLFFASHLASGYITGQVLDINGGQ  255 (258)
T ss_dssp             GTHHHHHHHHCHHHHTTCCSEEEEESTTS
T ss_pred             HHHHHHHHHhCcchhccccCCEEeECCCc
Confidence            99999999997642  2458899998875

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.93  E-value=1.9e-24  Score=201.36  Aligned_cols=219  Identities=16%  Similarity=0.161  Sum_probs=161.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +.++++|||||+|+||++++++|+++|++|++++|+.++.++..+.+...+             .++.++.+|++|.+++
T Consensus        26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~-------------~~~~~~~~Dv~d~~~v   92 (283)
T 3v8b_A           26 QPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAG-------------GQAIALEADVSDELQM   92 (283)
T ss_dssp             -CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTT-------------CCEEEEECCTTCHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------------CcEEEEEccCCCHHHH
Confidence            467899999999999999999999999999999999988877766554321             5789999999999888


Q ss_pred             HHHhc-------CCCEEEEccccCcc-cc------CCCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCCC
Q 016901          158 EPALG-------NASVVICCIGASEK-EV------FDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~~-~~------~~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~~  219 (380)
                      +++++       ++|+||||||.... ..      .++...+++|+.|+.++++++    ++.+.++||++||.......
T Consensus        93 ~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~  172 (283)
T 3v8b_A           93 RNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTF  172 (283)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBC
T ss_pred             HHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCC
Confidence            77763       79999999996432 11      122344889999999999887    55667899999997653210


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcccccc-cc------eeeccCCccc--CCCC
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-HN------ITLSQEDTLF--GGQV  283 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~~-~~------~~~~~~~~~~--~~~i  283 (380)
                          .......|+.+|.+.+.+.+.       .|+++++|+||++.++....... ..      ..........  +.+.
T Consensus       173 ----~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~  248 (283)
T 3v8b_A          173 ----TTPGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPG  248 (283)
T ss_dssp             ----CSTTCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBCTTCSCGGGTTCCB
T ss_pred             ----CCCCchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchhhhhhhhhhhhcCccccCCCC
Confidence                012345799999999988762       68999999999998875321100 00      1111111111  4567


Q ss_pred             CHHHHHHHHHHHHhCCC-CccCcEEEEecCC
Q 016901          284 SNLQVAELLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       284 ~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      +++|+|++++.++.+.. ...|+++++.+|.
T Consensus       249 ~pedvA~~v~fL~s~~a~~itG~~i~vdGG~  279 (283)
T 3v8b_A          249 RSEDVAELIRFLVSERARHVTGSPVWIDGGQ  279 (283)
T ss_dssp             CHHHHHHHHHHHTSGGGTTCCSCEEEESTTH
T ss_pred             CHHHHHHHHHHHcCccccCCcCCEEEECcCc
Confidence            99999999999987643 3568999888773

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.93  E-value=6.3e-26  Score=200.90  Aligned_cols=184  Identities=15%  Similarity=0.098  Sum_probs=144.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      |+|+||||+|+||++++++|+++  +|++++|++++.+.+.+.+                 .. +++.+|++|+++++++
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~-----------------~~-~~~~~D~~~~~~~~~~   60 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREV-----------------GA-RALPADLADELEAKAL   60 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHH-----------------TC-EECCCCTTSHHHHHHH
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhc-----------------cC-cEEEeeCCCHHHHHHH
Confidence            57999999999999999999999  9999999987766554322                 12 7889999999999998


Q ss_pred             hc---CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCCchhhhchhhHH
Q 016901          161 LG---NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGV  231 (380)
Q Consensus       161 ~~---~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~~Y  231 (380)
                      ++   ++|+||||||......      .++...+++|+.|+.++++++++.+.++||++||..+...      ..+...|
T Consensus        61 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~~------~~~~~~Y  134 (207)
T 2yut_A           61 LEEAGPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYVQ------VPGFAAY  134 (207)
T ss_dssp             HHHHCSEEEEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHS------STTBHHH
T ss_pred             HHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhccC------CCCcchH
Confidence            87   8999999999653221      1233447899999999999997777789999999865321      2345679


Q ss_pred             HHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHHHHhCCC
Q 016901          232 LLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRS  300 (380)
Q Consensus       232 ~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~~  300 (380)
                      +.+|.+.|.+++.       .|+++++||||+++++....          .......+++++|+|++++.+++++.
T Consensus       135 ~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~~----------~~~~~~~~~~~~dva~~~~~~~~~~~  200 (207)
T 2yut_A          135 AAAKGALEAYLEAARKELLREGVHLVLVRLPAVATGLWAP----------LGGPPKGALSPEEAARKVLEGLFREP  200 (207)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGGGGG----------GTSCCTTCBCHHHHHHHHHHHHC--C
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCCEEEEEecCcccCCCccc----------cCCCCCCCCCHHHHHHHHHHHHhCCC
Confidence            9999999988753       69999999999999874210          11123568999999999999998765

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.93  E-value=4.3e-25  Score=207.18  Aligned_cols=234  Identities=15%  Similarity=0.146  Sum_probs=168.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++|++|||||+|+||+++++.|+++|++|++++|+.++.++..+.+...+.          ...++.++.+|++|.+++
T Consensus        24 l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~----------~~~~~~~~~~Dv~d~~~v   93 (297)
T 1xhl_A           24 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGV----------PAEKINAVVADVTEASGQ   93 (297)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC----------CGGGEEEEECCTTSHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC----------CCceEEEEecCCCCHHHH
Confidence            4678999999999999999999999999999999998887776665543210          002689999999999888


Q ss_pred             HHHhc-------CCCEEEEccccCcccc--------CCCCCcchhhHHHHHHHHHHHHH----cCCCEEEEEccCCCCCC
Q 016901          158 EPALG-------NASVVICCIGASEKEV--------FDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKF  218 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~~~~--------~~~~~~~~~nv~g~~~ll~a~~~----~~v~r~V~~SS~~~~~~  218 (380)
                      +++++       ++|+||||||......        .++...+++|+.|+.++++++..    .+ ++||++||......
T Consensus        94 ~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~  172 (297)
T 1xhl_A           94 DDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQ  172 (297)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSS
T ss_pred             HHHHHHHHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccC
Confidence            87764       7999999999653221        12334588999999998887753    45 79999999766432


Q ss_pred             CCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccccc--c-------cceeeccCCcccCCC
Q 016901          219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE--T-------HNITLSQEDTLFGGQ  282 (380)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~--~-------~~~~~~~~~~~~~~~  282 (380)
                      ..     .....|+.+|.+.+.+.+       ..|+++++|+||++.++......  .       ............+.+
T Consensus       173 ~~-----~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~  247 (297)
T 1xhl_A          173 AH-----SGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHC  247 (297)
T ss_dssp             CC-----TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSC
T ss_pred             CC-----CCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHhcCCCCCC
Confidence            10     233579999999987765       36999999999999987421110  0       000000111123457


Q ss_pred             CCHHHHHHHHHHHHhCC--CCccCcEEEEecCCCCCcchHHHHHHhc
Q 016901          283 VSNLQVAELLACMAKNR--SLSYCKVVEVIAETTAPLTPMEELLAKI  327 (380)
Q Consensus       283 i~~~DvA~~i~~~l~~~--~~~~~~~~ni~~~~~~s~~~~~e~~~~~  327 (380)
                      .+++|+|++++.++.++  ....|++|++.+|......+.++.+.++
T Consensus       248 ~~pedvA~~v~~l~s~~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~  294 (297)
T 1xhl_A          248 GKPEEIANIIVFLADRNLSSYIIGQSIVADGGSTLVMGMQTHDLMSV  294 (297)
T ss_dssp             BCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGCCGGGGSCHHHH
T ss_pred             cCHHHHHHHHHHHhCCcccCCccCcEEEECCCccccccccccchhhh
Confidence            89999999999999754  2356899999998766666654444443

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.93  E-value=1.6e-24  Score=200.23  Aligned_cols=218  Identities=13%  Similarity=0.133  Sum_probs=159.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHH-HhhhhcccccccCCCCCCceEEEEcCCCChh
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSV-KQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~  155 (380)
                      .+++|++|||||+|+||+++++.|+++|++|++++|+.++.+...+.+ ...+             .++.++.+|++|.+
T Consensus        18 ~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-------------~~~~~~~~Dl~~~~   84 (267)
T 1vl8_A           18 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYG-------------VETMAFRCDVSNYE   84 (267)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC-------------CCEEEEECCTTCHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC-------------CeEEEEEcCCCCHH
Confidence            457789999999999999999999999999999999988776665544 2211             56888999999998


Q ss_pred             cHHHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCC-CCC
Q 016901          156 QIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLG-TNK  217 (380)
Q Consensus       156 ~~~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~-~~~  217 (380)
                      +++++++       ++|+||||||......      .++...+++|+.|+.++++++.    +.+.++||++||.. ...
T Consensus        85 ~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~  164 (267)
T 1vl8_A           85 EVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEV  164 (267)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCC
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhcc
Confidence            8887764       7999999999653221      1223457899999999888763    45678999999977 322


Q ss_pred             CCCchhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCccccc--ccceeeccCCcccCCCCCHHHH
Q 016901          218 FGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE--THNITLSQEDTLFGGQVSNLQV  288 (380)
Q Consensus       218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~--~~~~~~~~~~~~~~~~i~~~Dv  288 (380)
                       +     ......|+.+|.+.+.+++.       .|+++++|+||++.++......  .............+.+++++|+
T Consensus       165 -~-----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dv  238 (267)
T 1vl8_A          165 -T-----MPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDL  238 (267)
T ss_dssp             -C-----SSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGG
T ss_pred             -C-----CCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccChHHHHHHHhhCCCCCCcCHHHH
Confidence             1     12345799999999987752       6999999999999887432100  0000000011123457899999


Q ss_pred             HHHHHHHHhCC-CCccCcEEEEecCC
Q 016901          289 AELLACMAKNR-SLSYCKVVEVIAET  313 (380)
Q Consensus       289 A~~i~~~l~~~-~~~~~~~~ni~~~~  313 (380)
                      |++++.++.+. ....|+++.+.+|.
T Consensus       239 A~~v~~l~s~~~~~itG~~i~vdGG~  264 (267)
T 1vl8_A          239 KGVAVFLASEEAKYVTGQIIFVDGGW  264 (267)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHcCccccCCcCCeEEECCCC
Confidence            99999999764 33568889888774

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.93  E-value=2.1e-24  Score=197.98  Aligned_cols=216  Identities=17%  Similarity=0.094  Sum_probs=158.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      +|++|||||+|+||++++++|+++|++|++++|+.++.+++.+.+...+             .++.++.+|++|.+++++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~D~~~~~~v~~   68 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAG-------------GHAVAVKVDVSDRDQVFA   68 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------------CCEEEEECCTTSHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------------CcEEEEEecCCCHHHHHH
Confidence            4789999999999999999999999999999999887776665554321             568899999999988888


Q ss_pred             Hhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHH----HcC-CCEEEEEccCCCCCCCCc
Q 016901          160 ALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAK-VNHFIMVSSLGTNKFGFP  221 (380)
Q Consensus       160 a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~----~~~-v~r~V~~SS~~~~~~~~~  221 (380)
                      +++       ++|+||||||......      .++...+++|+.|+.++++++.    +.+ .++||++||.......  
T Consensus        69 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--  146 (256)
T 1geg_A           69 AVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGN--  146 (256)
T ss_dssp             HHHHHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC--
T ss_pred             HHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCC--
Confidence            774       7999999999653221      1223457899999988877664    345 5799999997653221  


Q ss_pred             hhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcccc-----c-----ccc-eeeccCCcccCCCC
Q 016901          222 AAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-----E-----THN-ITLSQEDTLFGGQV  283 (380)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~-----~-----~~~-~~~~~~~~~~~~~i  283 (380)
                          .....|+.+|.+.+.+.+.       .|+++++|+||++.+|.....     .     ... ..........+.+.
T Consensus       147 ----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~  222 (256)
T 1geg_A          147 ----PELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLS  222 (256)
T ss_dssp             ----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCB
T ss_pred             ----CCchhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcCCCCCCc
Confidence                2345799999999877652       689999999999998742110     0     000 00000111234578


Q ss_pred             CHHHHHHHHHHHHhCCC-CccCcEEEEecCCC
Q 016901          284 SNLQVAELLACMAKNRS-LSYCKVVEVIAETT  314 (380)
Q Consensus       284 ~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~~  314 (380)
                      +++|+|++++.++.++. ...|+++++.+|..
T Consensus       223 ~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~  254 (256)
T 1geg_A          223 EPEDVAACVSYLASPDSDYMTGQSLLIDGGMV  254 (256)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred             CHHHHHHHHHHHhCccccCCCCCEEEeCCCcc
Confidence            99999999999997643 35688999888753

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.93  E-value=4.2e-25  Score=203.69  Aligned_cols=217  Identities=16%  Similarity=0.113  Sum_probs=162.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++|++|||||+|+||++++++|+++|++|++++|+.++.+++.+.+...+             .++.++.+|++|.+++
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~Dv~~~~~v   75 (264)
T 3ucx_A            9 LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTG-------------RRALSVGTDITDDAQV   75 (264)
T ss_dssp             TTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------------CCEEEEECCTTCHHHH
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcC-------------CcEEEEEcCCCCHHHH
Confidence            467899999999999999999999999999999999988887777665432             6799999999999888


Q ss_pred             HHHh-------cCCCEEEEccccCcc-cc------CCCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCCC
Q 016901          158 EPAL-------GNASVVICCIGASEK-EV------FDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       158 ~~a~-------~~~d~Vi~~Ag~~~~-~~------~~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~~  219 (380)
                      ++++       +++|+||||||.... ..      .++...+++|+.|+.++++++.    +.+ ++||++||...... 
T Consensus        76 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~-  153 (264)
T 3ucx_A           76 AHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRHS-  153 (264)
T ss_dssp             HHHHHHHHHHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGCC-
T ss_pred             HHHHHHHHHHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhccC-
Confidence            8776       379999999986421 11      1233448899999999988764    334 69999999866432 


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccccc-----------ccceeeccCCcccCC
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE-----------THNITLSQEDTLFGG  281 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~-----------~~~~~~~~~~~~~~~  281 (380)
                           ......|+.+|.+.+.+.+       .+|+++++|+||++++|......           .............+.
T Consensus       154 -----~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r  228 (264)
T 3ucx_A          154 -----QAKYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKR  228 (264)
T ss_dssp             -----CTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSSSSS
T ss_pred             -----CCccHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCCccc
Confidence                 1234579999999997765       27899999999999987431100           000000111223345


Q ss_pred             CCCHHHHHHHHHHHHhCC-CCccCcEEEEecCCC
Q 016901          282 QVSNLQVAELLACMAKNR-SLSYCKVVEVIAETT  314 (380)
Q Consensus       282 ~i~~~DvA~~i~~~l~~~-~~~~~~~~ni~~~~~  314 (380)
                      +.+++|+|++++.++.+. ....|+++++.+|..
T Consensus       229 ~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~  262 (264)
T 3ucx_A          229 LPTEDEVASAILFMASDLASGITGQALDVNCGEY  262 (264)
T ss_dssp             CCBHHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred             CCCHHHHHHHHHHHcCccccCCCCCEEEECCCcc
Confidence            789999999999999764 335799999988864

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.93  E-value=3e-24  Score=199.33  Aligned_cols=222  Identities=14%  Similarity=0.089  Sum_probs=160.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC------------chhHHHHHHHHHhhhhcccccccCCCCCCce
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS------------VQRAENLVQSVKQMKLDGELANKGIQPVEML  144 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  144 (380)
                      .+.+|++|||||+|+||++++++|+++|++|++++|+            .+......+.+...+             .++
T Consensus        10 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~   76 (278)
T 3sx2_A           10 PLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIG-------------SRI   76 (278)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHT-------------CCE
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcC-------------CeE
Confidence            4578999999999999999999999999999999987            445555444444322             679


Q ss_pred             EEEEcCCCChhcHHHHhc-------CCCEEEEccccCcccc--CCCCCcchhhHHHHHHHHHHHH----HcC-CCEEEEE
Q 016901          145 ELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV--FDITGPYRIDFQATKNLVDAAT----IAK-VNHFIMV  210 (380)
Q Consensus       145 ~~~~~Dl~d~~~~~~a~~-------~~d~Vi~~Ag~~~~~~--~~~~~~~~~nv~g~~~ll~a~~----~~~-v~r~V~~  210 (380)
                      .++.+|++|.++++++++       ++|+||||||......  .++...+++|+.|+.++++++.    +.+ .++||++
T Consensus        77 ~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~i  156 (278)
T 3sx2_A           77 VARQADVRDRESLSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLI  156 (278)
T ss_dssp             EEEECCTTCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEE
T ss_pred             EEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEE
Confidence            999999999998887774       7999999999653322  2344558899999999998864    333 4699999


Q ss_pred             ccCCCCCCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccc----------cceeec
Q 016901          211 SSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET----------HNITLS  273 (380)
Q Consensus       211 SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~----------~~~~~~  273 (380)
                      ||........  ........|+.+|.+.+.+.+       ..|+++++|+||++.+|.......          ......
T Consensus       157 sS~~~~~~~~--~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  234 (278)
T 3sx2_A          157 SSSAGLAGVG--SADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGA  234 (278)
T ss_dssp             CCGGGTSCCC--CSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CT
T ss_pred             ccHHhcCCCc--cCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhh
Confidence            9976533211  111345679999999998765       268999999999999885321000          000000


Q ss_pred             cCCcccCCCCCHHHHHHHHHHHHhCC-CCccCcEEEEecCC
Q 016901          274 QEDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET  313 (380)
Q Consensus       274 ~~~~~~~~~i~~~DvA~~i~~~l~~~-~~~~~~~~ni~~~~  313 (380)
                      ......+.+++++|+|++++.++.+. ....|+++++.+|.
T Consensus       235 ~~~~~p~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~  275 (278)
T 3sx2_A          235 MGNAMPVEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGF  275 (278)
T ss_dssp             TSCSSSCSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred             hhhhcCcCcCCHHHHHHHHHHHhCcccccccCCEEeECCCc
Confidence            11111246789999999999998764 33578999998875

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.93  E-value=2.1e-24  Score=201.21  Aligned_cols=218  Identities=14%  Similarity=0.110  Sum_probs=156.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .+++++|+||||+|+||+++++.|+++|++|+++.|+.++.+.+.+.++..+             .++.++.+|++|.++
T Consensus        41 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-------------~~~~~~~~Dl~d~~~  107 (285)
T 2c07_A           41 CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFG-------------YESSGYAGDVSKKEE  107 (285)
T ss_dssp             CCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTT-------------CCEEEEECCTTCHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcC-------------CceeEEECCCCCHHH
Confidence            3467899999999999999999999999999999999887776665554321             578899999999998


Q ss_pred             HHHHh-------cCCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCCC
Q 016901          157 IEPAL-------GNASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       157 ~~~a~-------~~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~~  219 (380)
                      +++++       +++|+||||||.......      ++...+++|+.|+.++++++.    +.+.++||++||...... 
T Consensus       108 v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-  186 (285)
T 2c07_A          108 ISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTG-  186 (285)
T ss_dssp             HHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC-
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccC-
Confidence            88876       479999999996532211      223447899999877777664    456789999999754221 


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHH
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELL  292 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i  292 (380)
                           ......|+.+|.+.+.+++.       .|+++++|+||++.++...................+.+++++|+|+++
T Consensus       187 -----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~  261 (285)
T 2c07_A          187 -----NVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIISNIPAGRMGTPEEVANLA  261 (285)
T ss_dssp             -----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHHHHTTCTTSSCBCHHHHHHHH
T ss_pred             -----CCCCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcCHHHHHHHHhhCCCCCCCCHHHHHHHH
Confidence                 12345799999999877652       589999999999998743211000000000111224578999999999


Q ss_pred             HHHHhCCC-CccCcEEEEecCC
Q 016901          293 ACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       293 ~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      +.++.++. ...|++|++.+|.
T Consensus       262 ~~l~~~~~~~~~G~~i~v~gG~  283 (285)
T 2c07_A          262 CFLSSDKSGYINGRVFVIDGGL  283 (285)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTS
T ss_pred             HHHhCCCcCCCCCCEEEeCCCc
Confidence            99997643 3468899988774

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.93  E-value=4.7e-24  Score=194.91  Aligned_cols=214  Identities=14%  Similarity=0.097  Sum_probs=151.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCc-hhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV-QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      +++|++|||||+|+||++++++|+++|++|++++|++ ++.++   .++..+             .++.++.+|++|.++
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~-------------~~~~~~~~Dv~~~~~   68 (249)
T 2ew8_A            5 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIRNLG-------------RRVLTVKCDVSQPGD   68 (249)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH---HHHHTT-------------CCEEEEECCTTCHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH---HHHhcC-------------CcEEEEEeecCCHHH
Confidence            4678999999999999999999999999999999998 65543   222211             578899999999988


Q ss_pred             HHHHh-------cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHH----HHHcCCCEEEEEccCCCCCCC
Q 016901          157 IEPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDA----ATIAKVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       157 ~~~a~-------~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a----~~~~~v~r~V~~SS~~~~~~~  219 (380)
                      +++++       +++|+||||||......      .++...+++|+.|+.+++++    +++.+.++||++||.......
T Consensus        69 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  148 (249)
T 2ew8_A           69 VEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKI  148 (249)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCC
Confidence            88775       57999999999653221      12334578999998887777    556677899999998664321


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcc-ccccc-ceeeccCCcccCCCCCHHHHHH
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDA-YKETH-NITLSQEDTLFGGQVSNLQVAE  290 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~-~~~~~-~~~~~~~~~~~~~~i~~~DvA~  290 (380)
                            .....|+.+|.+.+.+.+.       .|+++++|+||++.++... ..... .-.........+.+.+++|+|+
T Consensus       149 ------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~  222 (249)
T 2ew8_A          149 ------EAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTG  222 (249)
T ss_dssp             ------SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------CTTSSSCSCCCTHHHHH
T ss_pred             ------CCchhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccchhhHHHHhhCccCCCCCHHHHHH
Confidence                  2345799999999987752       6899999999999987532 10000 0000000012345789999999


Q ss_pred             HHHHHHhCC-CCccCcEEEEecCC
Q 016901          291 LLACMAKNR-SLSYCKVVEVIAET  313 (380)
Q Consensus       291 ~i~~~l~~~-~~~~~~~~ni~~~~  313 (380)
                      +++.++.+. ....|+++++.+|.
T Consensus       223 ~~~~l~s~~~~~~tG~~~~vdGG~  246 (249)
T 2ew8_A          223 AAAFLASDDASFITGQTLAVDGGM  246 (249)
T ss_dssp             HHHHHTSGGGTTCCSCEEEESSSC
T ss_pred             HHHHHcCcccCCCCCcEEEECCCc
Confidence            999999754 23568899988874

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.93  E-value=8.7e-24  Score=194.84  Aligned_cols=220  Identities=16%  Similarity=0.132  Sum_probs=160.4

Q ss_pred             CCCCCCeEEEEcCCC-hHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCCh
Q 016901           76 DSKDDNLAFVAGATG-KVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (380)
Q Consensus        76 ~~~~~~~vlVtGatG-~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~  154 (380)
                      ..++++++|||||+| +||++++++|+++|++|++++|+.++.++..+.+...            ...++.++.+|++|.
T Consensus        18 ~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~------------~~~~~~~~~~Dl~~~   85 (266)
T 3o38_A           18 GLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADL------------GLGRVEAVVCDVTST   85 (266)
T ss_dssp             STTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT------------CSSCEEEEECCTTCH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhc------------CCCceEEEEeCCCCH
Confidence            345789999999997 6999999999999999999999998887776665432            125799999999999


Q ss_pred             hcHHHHh-------cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHHHc-----CCCEEEEEccCCCC
Q 016901          155 VQIEPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIA-----KVNHFIMVSSLGTN  216 (380)
Q Consensus       155 ~~~~~a~-------~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~~~-----~v~r~V~~SS~~~~  216 (380)
                      +++++++       +.+|+||||||......      .++...+++|+.|+.++++++...     +.++||++||....
T Consensus        86 ~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~  165 (266)
T 3o38_A           86 EAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGW  165 (266)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGT
T ss_pred             HHHHHHHHHHHHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHc
Confidence            8888776       37899999999653321      123344789999999999887643     45689999997664


Q ss_pred             CCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccc-cccceeeccCCcccCCCCCHHHH
Q 016901          217 KFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-ETHNITLSQEDTLFGGQVSNLQV  288 (380)
Q Consensus       217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~-~~~~~~~~~~~~~~~~~i~~~Dv  288 (380)
                      ...      .....|+.+|.+.+.+++       ..|+++++|+||++.++..... ..............+.+.+++|+
T Consensus       166 ~~~------~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~~~dv  239 (266)
T 3o38_A          166 RAQ------HSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSSELLDRLASDEAFGRAAEPWEV  239 (266)
T ss_dssp             CCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-----------------CCTTSSCCCHHHH
T ss_pred             CCC------CCCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCcHHHHHHHHhcCCcCCCCCHHHH
Confidence            321      234579999999998765       2689999999999988743211 11111111122233467899999


Q ss_pred             HHHHHHHHhCC-CCccCcEEEEecCC
Q 016901          289 AELLACMAKNR-SLSYCKVVEVIAET  313 (380)
Q Consensus       289 A~~i~~~l~~~-~~~~~~~~ni~~~~  313 (380)
                      |++++.++.+. ....|+++++.+|.
T Consensus       240 a~~i~~l~s~~~~~~tG~~i~vdgG~  265 (266)
T 3o38_A          240 AATIAFLASDYSSYMTGEVVSVSSQR  265 (266)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESSCC
T ss_pred             HHHHHHHcCccccCccCCEEEEcCCc
Confidence            99999999764 33568999998874

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.93  E-value=3.7e-24  Score=198.79  Aligned_cols=209  Identities=19%  Similarity=0.207  Sum_probs=150.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .+++++||||||+|+||+++++.|+++|++|++++|+.++.+.+.+.+...+.           ..++.++.+|++|.++
T Consensus        29 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-----------~~~~~~~~~Dl~~~~~   97 (279)
T 1xg5_A           29 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGY-----------PGTLIPYRCDLSNEED   97 (279)
T ss_dssp             GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-----------SSEEEEEECCTTCHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCC-----------CceEEEEEecCCCHHH
Confidence            34678999999999999999999999999999999998877776665543221           1468889999999998


Q ss_pred             HHHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHH----HHHHHHHHHHcCC--CEEEEEccCCCCC
Q 016901          157 IEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQA----TKNLVDAATIAKV--NHFIMVSSLGTNK  217 (380)
Q Consensus       157 ~~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g----~~~ll~a~~~~~v--~r~V~~SS~~~~~  217 (380)
                      ++++++       ++|+||||||......      .++...+++|+.+    ++++++.+++.+.  ++||++||.....
T Consensus        98 v~~~~~~~~~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~  177 (279)
T 1xg5_A           98 ILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHR  177 (279)
T ss_dssp             HHHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTS
T ss_pred             HHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcc
Confidence            887764       7999999999653221      1223447899999    6777777887775  7999999987642


Q ss_pred             CCCchhhhchhhHHHHHHHHHHHHHH---------HCCCCEEEEecCcccCCCccc-ccccceeeccCCcccCCCCCHHH
Q 016901          218 FGFPAAILNLFWGVLLWKRKAEEALI---------ASGLPYTIVRPGGMERPTDAY-KETHNITLSQEDTLFGGQVSNLQ  287 (380)
Q Consensus       218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~---------~~g~~~~ivRpg~v~gp~~~~-~~~~~~~~~~~~~~~~~~i~~~D  287 (380)
                      ..    +......|+.+|.+.+.+++         ..|+++++|+||++.++.... .......... ......+++++|
T Consensus       178 ~~----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~d  252 (279)
T 1xg5_A          178 VL----PLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAA-TYEQMKCLKPED  252 (279)
T ss_dssp             CC----SCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHH-HHC---CBCHHH
T ss_pred             cC----CCCCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccChhHHhh-hcccccCCCHHH
Confidence            11    12344679999999887654         358999999999998874210 0000000000 011224689999


Q ss_pred             HHHHHHHHHhCCCC
Q 016901          288 VAELLACMAKNRSL  301 (380)
Q Consensus       288 vA~~i~~~l~~~~~  301 (380)
                      +|++++.++..+..
T Consensus       253 vA~~i~~l~~~~~~  266 (279)
T 1xg5_A          253 VAEAVIYVLSTPAH  266 (279)
T ss_dssp             HHHHHHHHHHSCTT
T ss_pred             HHHHHHHHhcCCcc
Confidence            99999999987663

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.93  E-value=6.1e-25  Score=203.95  Aligned_cols=220  Identities=14%  Similarity=0.105  Sum_probs=159.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .+++++||||||+|+||++++++|+++|++|++++|+.++.+.+.+.+...+             .++.++.+|++|.++
T Consensus        31 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~Dl~~~~~   97 (279)
T 3ctm_A           31 SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYG-------------VHSKAYKCNISDPKS   97 (279)
T ss_dssp             CCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHC-------------SCEEEEECCTTCHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------------CcceEEEeecCCHHH
Confidence            3567899999999999999999999999999999999877666555444321             578899999999988


Q ss_pred             HHHHhc-------CCCEEEEccccCcc-ccC-------CCCCcchhhHHH----HHHHHHHHHHcCCCEEEEEccCCCCC
Q 016901          157 IEPALG-------NASVVICCIGASEK-EVF-------DITGPYRIDFQA----TKNLVDAATIAKVNHFIMVSSLGTNK  217 (380)
Q Consensus       157 ~~~a~~-------~~d~Vi~~Ag~~~~-~~~-------~~~~~~~~nv~g----~~~ll~a~~~~~v~r~V~~SS~~~~~  217 (380)
                      ++++++       .+|+||||||.... ...       ++...+++|+.|    ++++++.+++.+.++||++||.....
T Consensus        98 ~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~  177 (279)
T 3ctm_A           98 VEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKI  177 (279)
T ss_dssp             HHHHHHHHHHHHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSC
T ss_pred             HHHHHHHHHHHhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhcc
Confidence            887764       59999999996533 111       122347789999    56777777777888999999987643


Q ss_pred             CCCchhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHH
Q 016901          218 FGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAE  290 (380)
Q Consensus       218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~  290 (380)
                      ..    .......|+.+|.+.|.+++.       .+ ++++|+||++.++...................+.+++++|+|+
T Consensus       178 ~~----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~  252 (279)
T 3ctm_A          178 VN----IPQLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFASKDMKAKWWQLTPLGREGLTQELVG  252 (279)
T ss_dssp             C-------CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSCCHHHHHHHHHHSTTCSCBCGGGTHH
T ss_pred             CC----CCCCcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccccccChHHHHHHHHhCCccCCcCHHHHHH
Confidence            21    123456799999999988762       57 9999999999887432110000000001112235789999999


Q ss_pred             HHHHHHhCC-CCccCcEEEEecCCC
Q 016901          291 LLACMAKNR-SLSYCKVVEVIAETT  314 (380)
Q Consensus       291 ~i~~~l~~~-~~~~~~~~ni~~~~~  314 (380)
                      +++.++.++ ....|+++++.+|..
T Consensus       253 ~~~~l~s~~~~~~tG~~i~vdgG~~  277 (279)
T 3ctm_A          253 GYLYLASNASTFTTGSDVVIDGGYT  277 (279)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             HHHHHhCccccCccCCEEEECCCee
Confidence            999999764 234688999988753

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.93  E-value=7.6e-25  Score=201.64  Aligned_cols=220  Identities=16%  Similarity=0.187  Sum_probs=157.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhH-HHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRA-ENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      ++++++||||+|+||++++++|+++|++|+++.|+.... +.+.+.+...             ..++.++.+|++|.+++
T Consensus         6 ~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~Dl~~~~~v   72 (264)
T 3i4f_A            6 FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDV-------------EERLQFVQADVTKKEDL   72 (264)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGG-------------GGGEEEEECCTTSHHHH
T ss_pred             ccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhc-------------CCceEEEEecCCCHHHH
Confidence            468999999999999999999999999999998876543 3333322221             15799999999999988


Q ss_pred             HHHhc-------CCCEEEEccccC--ccc------cCCCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCC-C
Q 016901          158 EPALG-------NASVVICCIGAS--EKE------VFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTN-K  217 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~--~~~------~~~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~-~  217 (380)
                      +++++       ++|+||||||..  ...      ..++...+++|+.|+.++++++    ++.+.++||++||.+.. .
T Consensus        73 ~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~  152 (264)
T 3i4f_A           73 HKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSA  152 (264)
T ss_dssp             HHHHHHHHHHHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGC
T ss_pred             HHHHHHHHHHhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhccc
Confidence            88774       799999999932  111      1123344789999999999987    56677899999998543 2


Q ss_pred             CCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHH
Q 016901          218 FGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAE  290 (380)
Q Consensus       218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~  290 (380)
                      .+     ......|+.+|.+.+.+.+       ..|+++++|+||+++++...................+.+.+++|+|+
T Consensus       153 ~~-----~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~  227 (264)
T 3i4f_A          153 PG-----WIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQEARQLKEHNTPIGRSGTGEDIAR  227 (264)
T ss_dssp             CC-----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCHHHHHHC--------CCCCHHHHHH
T ss_pred             CC-----CCCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhccHHHHHHHhhcCCCCCCcCHHHHHH
Confidence            21     1234579999999997765       26899999999999987532111111111111223345789999999


Q ss_pred             HHHHHHhCCC-CccCcEEEEecCCCCC
Q 016901          291 LLACMAKNRS-LSYCKVVEVIAETTAP  316 (380)
Q Consensus       291 ~i~~~l~~~~-~~~~~~~ni~~~~~~s  316 (380)
                      +++.++.+.. ...|++|++.+|-...
T Consensus       228 ~v~~l~s~~~~~itG~~i~vdGG~~~~  254 (264)
T 3i4f_A          228 TISFLCEDDSDMITGTIIEVTGAVDVI  254 (264)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESCSCCCC
T ss_pred             HHHHHcCcccCCCCCcEEEEcCceeec
Confidence            9999998643 3468999999887553

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.93  E-value=1.1e-24  Score=200.22  Aligned_cols=216  Identities=15%  Similarity=0.137  Sum_probs=158.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchh--HHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR--AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +|+++||||+|+||++++++|+++|++|++++|+.++  .++..+.+...+             .++.++.+|++|.+++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-------------~~~~~~~~Dv~~~~~v   68 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAAD-------------QKAVFVGLDVTDKANF   68 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTT-------------CCEEEEECCTTCHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcC-------------CcEEEEEccCCCHHHH
Confidence            5789999999999999999999999999999998876  555555443211             5788999999999888


Q ss_pred             HHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHHH----cCC-CEEEEEccCCCCCCC
Q 016901          158 EPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATI----AKV-NHFIMVSSLGTNKFG  219 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~~----~~v-~r~V~~SS~~~~~~~  219 (380)
                      +++++       ++|+||||||......      .++...+++|+.|+.++++++..    .+. ++||++||.......
T Consensus        69 ~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  148 (258)
T 3a28_C           69 DSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGF  148 (258)
T ss_dssp             HHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCC
T ss_pred             HHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCC
Confidence            87764       7999999999653221      12334588999999998888754    466 799999997653321


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccc-c-------cc--cc-eeeccCCcccCC
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAY-K-------ET--HN-ITLSQEDTLFGG  281 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~-~-------~~--~~-~~~~~~~~~~~~  281 (380)
                            .....|+.+|.+.+.+.+       ..|+++++|+||++.++.... .       ..  .. ..........+.
T Consensus       149 ------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r  222 (258)
T 3a28_C          149 ------PILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGR  222 (258)
T ss_dssp             ------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTCTTSS
T ss_pred             ------CCchhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHhcCCCCC
Confidence                  234579999999997765       268999999999998763211 0       00  00 000001112345


Q ss_pred             CCCHHHHHHHHHHHHhCCC-CccCcEEEEecCCC
Q 016901          282 QVSNLQVAELLACMAKNRS-LSYCKVVEVIAETT  314 (380)
Q Consensus       282 ~i~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~~  314 (380)
                      +.+++|+|++++.++.+.. ...|+++++.+|..
T Consensus       223 ~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~  256 (258)
T 3a28_C          223 PSVPEDVAGLVSFLASENSNYVTGQVMLVDGGML  256 (258)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSC
T ss_pred             ccCHHHHHHHHHHHhCcccCCCCCCEEEECCCEe
Confidence            7899999999999997643 35688999988754

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.93  E-value=1.2e-24  Score=201.39  Aligned_cols=217  Identities=15%  Similarity=0.157  Sum_probs=153.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-eCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAG-VRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l-~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      ++++||||||+|+||++++++|+++|++|+++ .|+.+..+.+.+.+...+             .++.++.+|++|.+++
T Consensus        25 ~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~Dl~~~~~v   91 (272)
T 4e3z_A           25 DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESG-------------GEAVAIPGDVGNAADI   91 (272)
T ss_dssp             CSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-------------CEEEEEECCTTCHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcC-------------CcEEEEEcCCCCHHHH
Confidence            56799999999999999999999999999887 677777776666554422             6789999999999888


Q ss_pred             HHHhc-------CCCEEEEccccCcc-c------cCCCCCcchhhHHHHHHHHHHHHHc-------CCCEEEEEccCCCC
Q 016901          158 EPALG-------NASVVICCIGASEK-E------VFDITGPYRIDFQATKNLVDAATIA-------KVNHFIMVSSLGTN  216 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~~-~------~~~~~~~~~~nv~g~~~ll~a~~~~-------~v~r~V~~SS~~~~  216 (380)
                      +++++       ++|+||||||.... .      ..++...+++|+.|+.++++++...       +.++||++||....
T Consensus        92 ~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~  171 (272)
T 4e3z_A           92 AAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAI  171 (272)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHH
T ss_pred             HHHHHHHHHhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhc
Confidence            87763       78999999996542 1      1123445889999999999887543       34689999997652


Q ss_pred             CCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccc-cceeeccCCcccCCCCCHHHH
Q 016901          217 KFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-HNITLSQEDTLFGGQVSNLQV  288 (380)
Q Consensus       217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~-~~~~~~~~~~~~~~~i~~~Dv  288 (380)
                      ...     ......|+.+|.+.+.+++       ..|+++++|+||++.++....... ............+.+.+++|+
T Consensus       172 ~~~-----~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~edv  246 (272)
T 4e3z_A          172 LGS-----ATQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLPDRAREMAPSVPMQRAGMPEEV  246 (272)
T ss_dssp             HCC-----TTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC------------------CCTTSSCBCHHHH
T ss_pred             cCC-----CCCcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCChHHHHHHhhcCCcCCCcCHHHH
Confidence            211     1123469999999997765       258999999999999875321100 001111111223356789999


Q ss_pred             HHHHHHHHhCCC-CccCcEEEEecCC
Q 016901          289 AELLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       289 A~~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      |++++.++.+.. ...|++|++.+|.
T Consensus       247 A~~i~~l~s~~~~~~tG~~i~vdgG~  272 (272)
T 4e3z_A          247 ADAILYLLSPSASYVTGSILNVSGGR  272 (272)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHhCCccccccCCEEeecCCC
Confidence            999999997543 3468999998763

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.92  E-value=1.8e-24  Score=200.85  Aligned_cols=217  Identities=14%  Similarity=0.101  Sum_probs=160.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .+++|++|||||+|+||++++++|+++|++|++++|+.++.++..+.+.                .++.++.+|++|.++
T Consensus        26 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~----------------~~~~~~~~Dv~d~~~   89 (277)
T 3gvc_A           26 DLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIG----------------CGAAACRVDVSDEQQ   89 (277)
T ss_dssp             -CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHC----------------SSCEEEECCTTCHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC----------------CcceEEEecCCCHHH
Confidence            3577899999999999999999999999999999999887766654331                578899999999988


Q ss_pred             HHHHh-------cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCCC
Q 016901          157 IEPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       157 ~~~a~-------~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~~  219 (380)
                      +++++       +++|+||||||......      .++...+++|+.|+.++++++.    +.+.++||++||...... 
T Consensus        90 v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~-  168 (277)
T 3gvc_A           90 IIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVA-  168 (277)
T ss_dssp             HHHHHHHHHHHHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSC-
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccC-
Confidence            87766       37999999999753321      1233457899999998888764    356679999999766432 


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccc--c-ceee-ccC---CcccCCCCCH
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET--H-NITL-SQE---DTLFGGQVSN  285 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~--~-~~~~-~~~---~~~~~~~i~~  285 (380)
                           ......|+.+|.+.+.+.+       .+|+++++|+||++++|.......  . .... ...   ....+.+.++
T Consensus       169 -----~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p  243 (277)
T 3gvc_A          169 -----VGGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAP  243 (277)
T ss_dssp             -----CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC------CCHHHHHHHHHSSCBCH
T ss_pred             -----CCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhhHHHHhhhhhhhccccCCCCH
Confidence                 1234579999999998765       278999999999999874211000  0 0000 000   1122457899


Q ss_pred             HHHHHHHHHHHhCCC-CccCcEEEEecCCCC
Q 016901          286 LQVAELLACMAKNRS-LSYCKVVEVIAETTA  315 (380)
Q Consensus       286 ~DvA~~i~~~l~~~~-~~~~~~~ni~~~~~~  315 (380)
                      +|+|++++.++.+.. ...|+++++.+|...
T Consensus       244 edvA~~v~~L~s~~a~~itG~~i~vdGG~~~  274 (277)
T 3gvc_A          244 EEMAGIVVFLLSDDASMITGTTQIADGGTIA  274 (277)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHHHcCCccCCccCcEEEECCcchh
Confidence            999999999997643 356899999888643

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.92  E-value=3.5e-25  Score=200.76  Aligned_cols=204  Identities=17%  Similarity=0.122  Sum_probs=152.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      +|+||||||+|+||++++++|+++|++|++++|+.+ .                        .++.++.+|++|.+++++
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~------------------------~~~~~~~~D~~~~~~~~~   56 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G------------------------EDLIYVEGDVTREEDVRR   56 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S------------------------SSSEEEECCTTCHHHHHH
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c------------------------cceEEEeCCCCCHHHHHH
Confidence            478999999999999999999999999999999864 1                        457899999999999988


Q ss_pred             Hhc------CCCEEEEccccCccccC----------CCCCcchhhHHHHHHHHHHHHHc----C------CCEEEEEccC
Q 016901          160 ALG------NASVVICCIGASEKEVF----------DITGPYRIDFQATKNLVDAATIA----K------VNHFIMVSSL  213 (380)
Q Consensus       160 a~~------~~d~Vi~~Ag~~~~~~~----------~~~~~~~~nv~g~~~ll~a~~~~----~------v~r~V~~SS~  213 (380)
                      +++      ++|+||||||.......          ++...+++|+.++.++++++...    +      .++||++||.
T Consensus        57 ~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~  136 (242)
T 1uay_A           57 AVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASV  136 (242)
T ss_dssp             HHHHHHHHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCT
T ss_pred             HHHHHHhhCCceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCCh
Confidence            886      79999999996532211          22344789999999999988643    1      1399999998


Q ss_pred             CCCCCCCchhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCccccccc-ceeeccCCcccCCCCCH
Q 016901          214 GTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETH-NITLSQEDTLFGGQVSN  285 (380)
Q Consensus       214 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~~~-~~~~~~~~~~~~~~i~~  285 (380)
                      .....      ......|+.+|.+.+.+++.       .|+++++||||+++++........ ...+.......+.++++
T Consensus       137 ~~~~~------~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (242)
T 1uay_A          137 AAFEG------QIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPRLGRP  210 (242)
T ss_dssp             HHHHC------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHHHHHTTCCSSCSCCCH
T ss_pred             hhccC------CCCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccchhHHHHHHhhCCCcccCCCH
Confidence            65321      12345799999999877652       589999999999998743211100 00011111111457899


Q ss_pred             HHHHHHHHHHHhCCCCccCcEEEEecCCCC
Q 016901          286 LQVAELLACMAKNRSLSYCKVVEVIAETTA  315 (380)
Q Consensus       286 ~DvA~~i~~~l~~~~~~~~~~~ni~~~~~~  315 (380)
                      +|+|++++.++.+ ....|++|++.++...
T Consensus       211 ~dva~~~~~l~~~-~~~~G~~~~v~gG~~~  239 (242)
T 1uay_A          211 EEYAALVLHILEN-PMLNGEVVRLDGALRM  239 (242)
T ss_dssp             HHHHHHHHHHHHC-TTCCSCEEEESTTCCC
T ss_pred             HHHHHHHHHHhcC-CCCCCcEEEEcCCeec
Confidence            9999999999988 4357899999988754

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.92  E-value=7e-25  Score=202.36  Aligned_cols=223  Identities=13%  Similarity=0.104  Sum_probs=159.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++++++||||+|+||++++++|+++|++|++++|+.++..+..+.+....           ...++.++.+|++|++++
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-----------~~~~~~~~~~D~~~~~~v   73 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQF-----------EPQKTLFIQCDVADQQQL   73 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTS-----------CGGGEEEEECCTTSHHHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhc-----------CCCceEEEecCCCCHHHH
Confidence            467899999999999999999999999999999999877665544432210           014688999999999888


Q ss_pred             HHHhc-------CCCEEEEccccCccccCCCCCcchhhHHHHHHHH----HHHHHcC---CCEEEEEccCCCCCCCCchh
Q 016901          158 EPALG-------NASVVICCIGASEKEVFDITGPYRIDFQATKNLV----DAATIAK---VNHFIMVSSLGTNKFGFPAA  223 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll----~a~~~~~---v~r~V~~SS~~~~~~~~~~~  223 (380)
                      +++++       ++|+||||||...  ..++...+++|+.++.++.    +.+++.+   .++||++||.......    
T Consensus        74 ~~~~~~~~~~~g~id~lv~~Ag~~~--~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----  147 (267)
T 2gdz_A           74 RDTFRKVVDHFGRLDILVNNAGVNN--EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPV----  147 (267)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCC--SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC----
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCC--hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCC----
Confidence            87763       5899999999653  2344556889988765554    4454443   5799999998664321    


Q ss_pred             hhchhhHHHHHHHHHHHHHH---------HCCCCEEEEecCcccCCCccccc-cc---ce-eecc---CCcccCCCCCHH
Q 016901          224 ILNLFWGVLLWKRKAEEALI---------ASGLPYTIVRPGGMERPTDAYKE-TH---NI-TLSQ---EDTLFGGQVSNL  286 (380)
Q Consensus       224 ~~~~~~~Y~~sK~~~E~~l~---------~~g~~~~ivRpg~v~gp~~~~~~-~~---~~-~~~~---~~~~~~~~i~~~  286 (380)
                        .....|+.+|.+.+.+.+         ..|+++++|+||++.+|...... ..   .. ....   ......++++++
T Consensus       148 --~~~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (267)
T 2gdz_A          148 --AQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPP  225 (267)
T ss_dssp             --TTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHH
T ss_pred             --CCCchHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccccccccchhhhHHHHHHHHhccccCCCHH
Confidence              233569999999886654         26899999999999887321100 00   00 0000   000112468999


Q ss_pred             HHHHHHHHHHhCCCCccCcEEEEecCCCCCcchH
Q 016901          287 QVAELLACMAKNRSLSYCKVVEVIAETTAPLTPM  320 (380)
Q Consensus       287 DvA~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~  320 (380)
                      |+|++++.++.++. ..|++|++.+++..++.++
T Consensus       226 dvA~~v~~l~s~~~-~~G~~~~v~gg~~~~~~~~  258 (267)
T 2gdz_A          226 LIANGLITLIEDDA-LNGAIMKITTSKGIHFQDY  258 (267)
T ss_dssp             HHHHHHHHHHHCTT-CSSCEEEEETTTEEEECCC
T ss_pred             HHHHHHHHHhcCcC-CCCcEEEecCCCcccccCc
Confidence            99999999998765 6789999999886665543

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.92  E-value=5.1e-24  Score=196.91  Aligned_cols=220  Identities=15%  Similarity=0.132  Sum_probs=157.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEe-CCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGV-RSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~-R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~  155 (380)
                      ++.+++++||||+|+||++++++|+++|++|+++. |+.+........+...             ..++.++.+|++|.+
T Consensus        22 ~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~Dl~~~~   88 (269)
T 3gk3_A           22 MQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDA-------------GRDFKAYAVDVADFE   88 (269)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTT-------------TCCCEEEECCTTCHH
T ss_pred             hhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhc-------------CCceEEEEecCCCHH
Confidence            34678999999999999999999999999999998 5554444444333321             167999999999998


Q ss_pred             cHHHHhc-------CCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCC
Q 016901          156 QIEPALG-------NASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKF  218 (380)
Q Consensus       156 ~~~~a~~-------~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~  218 (380)
                      +++++++       ++|+||||||.......      ++...+++|+.|+.++++++.    +.+.++||++||......
T Consensus        89 ~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~  168 (269)
T 3gk3_A           89 SCERCAEKVLADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRG  168 (269)
T ss_dssp             HHHHHHHHHHHHHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccC
Confidence            8887764       79999999996543221      223347899999998888764    356679999999654221


Q ss_pred             CCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccccccccee-eccCCcccCCCCCHHHHHH
Q 016901          219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNIT-LSQEDTLFGGQVSNLQVAE  290 (380)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~-~~~~~~~~~~~i~~~DvA~  290 (380)
                            ......|+.+|.+.+.+++       ..|+++++|+||++.++........... ........+.+.+++|+|+
T Consensus       169 ------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~  242 (269)
T 3gk3_A          169 ------AFGQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQDVLEAKILPQIPVGRLGRPDEVAA  242 (269)
T ss_dssp             ------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC-------CCSGGGCTTSSCBCHHHHHH
T ss_pred             ------CCCcchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhchhHHHHHhhhcCCcCCccCHHHHHH
Confidence                  1234579999999987765       2689999999999988743211111111 1111122345679999999


Q ss_pred             HHHHHHhCCC-CccCcEEEEecCCCC
Q 016901          291 LLACMAKNRS-LSYCKVVEVIAETTA  315 (380)
Q Consensus       291 ~i~~~l~~~~-~~~~~~~ni~~~~~~  315 (380)
                      +++.++.+.. ...|++|++.+|...
T Consensus       243 ~v~~L~s~~~~~itG~~i~vdgG~~~  268 (269)
T 3gk3_A          243 LIAFLCSDDAGFVTGADLAINGGMHM  268 (269)
T ss_dssp             HHHHHTSTTCTTCCSCEEEESTTSCC
T ss_pred             HHHHHhCCCcCCeeCcEEEECCCEeC
Confidence            9999997653 357899999988654

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.92  E-value=1e-24  Score=202.80  Aligned_cols=222  Identities=15%  Similarity=0.136  Sum_probs=161.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .+++|++|||||+|+||++++++|+++|++|++++|+.++.++..+.+...+.          ...++.++.+|++|.++
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~----------~~~~~~~~~~Dv~~~~~   72 (280)
T 1xkq_A            3 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGV----------SEKQVNSVVADVTTEDG   72 (280)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTC----------CGGGEEEEECCTTSHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCC----------CCcceEEEEecCCCHHH
Confidence            34678999999999999999999999999999999999887776655543210          00268999999999988


Q ss_pred             HHHHhc-------CCCEEEEccccCcccc----------CCCCCcchhhHHHHHHHHHHHHH----cCCCEEEEEccCCC
Q 016901          157 IEPALG-------NASVVICCIGASEKEV----------FDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGT  215 (380)
Q Consensus       157 ~~~a~~-------~~d~Vi~~Ag~~~~~~----------~~~~~~~~~nv~g~~~ll~a~~~----~~v~r~V~~SS~~~  215 (380)
                      ++++++       ++|+||||||......          .++...+++|+.|+.++++++..    .+ ++||++||...
T Consensus        73 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~  151 (280)
T 1xkq_A           73 QDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVA  151 (280)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGG
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccc
Confidence            887764       7999999999653221          12234478999999999888753    34 79999999866


Q ss_pred             CCCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccccc--c-------cceeeccCCccc
Q 016901          216 NKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE--T-------HNITLSQEDTLF  279 (380)
Q Consensus       216 ~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~--~-------~~~~~~~~~~~~  279 (380)
                      .....     .....|+.+|.+.+.+.+       .+|+++++|+||++++|......  .       ............
T Consensus       152 ~~~~~-----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~  226 (280)
T 1xkq_A          152 GPQAQ-----PDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPI  226 (280)
T ss_dssp             SSSCC-----CSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTT
T ss_pred             cCCCC-----CcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHcCCCC
Confidence            43210     234579999999997765       26999999999999988432110  0       000000111123


Q ss_pred             CCCCCHHHHHHHHHHHHhCC--CCccCcEEEEecCCC
Q 016901          280 GGQVSNLQVAELLACMAKNR--SLSYCKVVEVIAETT  314 (380)
Q Consensus       280 ~~~i~~~DvA~~i~~~l~~~--~~~~~~~~ni~~~~~  314 (380)
                      +.+.+++|+|++++.++..+  ....|++|++.++..
T Consensus       227 ~~~~~pedvA~~v~~l~s~~~~~~~tG~~i~vdgG~~  263 (280)
T 1xkq_A          227 GAAGKPEHIANIILFLADRNLSFYILGQSIVADGGTS  263 (280)
T ss_dssp             SSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred             CCCCCHHHHHHHHHHhcCcccccCccCCeEEECCCcc
Confidence            45789999999999998754  235689999988854

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.92  E-value=5.9e-24  Score=194.70  Aligned_cols=204  Identities=12%  Similarity=0.052  Sum_probs=144.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      ++++++|||||+|+||++++++|+++|++|++++|+.++.+++.+.++..+             .++.++.+|++|.+++
T Consensus         5 ~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~Dv~~~~~v   71 (252)
T 3h7a_A            5 PRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAG-------------GRIVARSLDARNEDEV   71 (252)
T ss_dssp             CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT-------------CEEEEEECCTTCHHHH
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------------CeEEEEECcCCCHHHH
Confidence            467899999999999999999999999999999999998888877665432             6799999999999988


Q ss_pred             HHHhc------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCCCCc
Q 016901          158 EPALG------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGFP  221 (380)
Q Consensus       158 ~~a~~------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~~~~  221 (380)
                      +++++      ++|+||||||......      .++...+++|+.|+.++++++    ++.+.++||++||.......  
T Consensus        72 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--  149 (252)
T 3h7a_A           72 TAFLNAADAHAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGG--  149 (252)
T ss_dssp             HHHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCC--
T ss_pred             HHHHHHHHhhCCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCC--
Confidence            88775      6899999999654321      123344789999998888776    44566799999997664321  


Q ss_pred             hhhhchhhHHHHHHHHHHHHHH-------HCCCCE-EEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHH
Q 016901          222 AAILNLFWGVLLWKRKAEEALI-------ASGLPY-TIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA  293 (380)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~-~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~  293 (380)
                          .....|+.+|.+.+.+.+       ..|+++ ++|+||.+.++................... ++++++|+|++++
T Consensus       150 ----~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-~~~~pedvA~~~~  224 (252)
T 3h7a_A          150 ----SGFAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERREQMFGKDALANPD-LLMPPAAVAGAYW  224 (252)
T ss_dssp             ----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC----------------------------CCHHHHHHHHH
T ss_pred             ----CCCccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccchhhhhhhhhcCCc-cCCCHHHHHHHHH
Confidence                234579999999997765       268999 899999998774321111110001111122 3799999999999


Q ss_pred             HHHhCCCC
Q 016901          294 CMAKNRSL  301 (380)
Q Consensus       294 ~~l~~~~~  301 (380)
                      .++.++..
T Consensus       225 ~l~s~~~~  232 (252)
T 3h7a_A          225 QLYQQPKS  232 (252)
T ss_dssp             HHHHCCGG
T ss_pred             HHHhCchh
Confidence            99987653

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.92  E-value=5.3e-24  Score=197.62  Aligned_cols=216  Identities=11%  Similarity=0.075  Sum_probs=157.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++|+|+||||+|+||++++++|+++|++|++++|+.++.++..+.+...              .++.++.+|++|.+++
T Consensus        27 l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--------------~~~~~~~~Dv~d~~~v   92 (276)
T 2b4q_A           27 LAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAY--------------GDCQAIPADLSSEAGA   92 (276)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTS--------------SCEEECCCCTTSHHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--------------CceEEEEeeCCCHHHH
Confidence            46789999999999999999999999999999999988776655544211              3688899999999888


Q ss_pred             HHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHH----HcCC----CEEEEEccCCCC
Q 016901          158 EPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAKV----NHFIMVSSLGTN  216 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~----~~~v----~r~V~~SS~~~~  216 (380)
                      +++++       ++|+||||||......      .++...+++|+.|+.++++++.    +.+.    ++||++||....
T Consensus        93 ~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~  172 (276)
T 2b4q_A           93 RRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGI  172 (276)
T ss_dssp             HHHHHHHHHHCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGT
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHc
Confidence            87764       7999999999653221      1223457899999988777663    4444    799999998664


Q ss_pred             CCCCchhhhchhh-HHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccc-eeecc-CCcccCCCCCHH
Q 016901          217 KFGFPAAILNLFW-GVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHN-ITLSQ-EDTLFGGQVSNL  286 (380)
Q Consensus       217 ~~~~~~~~~~~~~-~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~-~~~~~-~~~~~~~~i~~~  286 (380)
                      ...      .... .|+.+|.+.+.+.+       ..|+++++|+||++.++......... ..+.. .....+.+.+++
T Consensus       173 ~~~------~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~  246 (276)
T 2b4q_A          173 SAM------GEQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIANDPQALEADSASIPMGRWGRPE  246 (276)
T ss_dssp             CCC------CCSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHHCHHHHHHHHHTSTTSSCCCHH
T ss_pred             CCC------CCCccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcchhHHHHHHhhcCCCCCCcCCHH
Confidence            321      1123 69999999998765       26899999999999987532110000 00000 011234578999


Q ss_pred             HHHHHHHHHHhCCC-CccCcEEEEecCC
Q 016901          287 QVAELLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       287 DvA~~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      |+|++++.++.++. ...|+++++.+|.
T Consensus       247 dvA~~v~~l~s~~~~~~tG~~i~vdGG~  274 (276)
T 2b4q_A          247 EMAALAISLAGTAGAYMTGNVIPIDGGF  274 (276)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence            99999999997643 3568899988774

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.92  E-value=2.1e-24  Score=197.93  Aligned_cols=214  Identities=13%  Similarity=0.035  Sum_probs=154.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ++|++|||||+|+||++++++|+++|++|++++|+.+  +...+.+...             ..++.++.+|++|.++++
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~-------------~~~~~~~~~D~~~~~~v~   67 (255)
T 2q2v_A            3 KGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARH-------------GVKAVHHPADLSDVAQIE   67 (255)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTT-------------SCCEEEECCCTTSHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhc-------------CCceEEEeCCCCCHHHHH
Confidence            5789999999999999999999999999999999876  3333333221             146888999999999888


Q ss_pred             HHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCCCCc
Q 016901          159 PALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGFP  221 (380)
Q Consensus       159 ~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~~~~  221 (380)
                      ++++       ++|+||||||......      .++...+++|+.|+.++++++    ++.+.++||++||.......  
T Consensus        68 ~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--  145 (255)
T 2q2v_A           68 ALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGS--  145 (255)
T ss_dssp             HHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC--
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCC--
Confidence            8875       8999999999653221      123345789999777666554    56777899999998664321  


Q ss_pred             hhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCccccc----cc---c----eeeccCCcccCCCC
Q 016901          222 AAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE----TH---N----ITLSQEDTLFGGQV  283 (380)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~----~~---~----~~~~~~~~~~~~~i  283 (380)
                          .....|+.+|...+.+.+.       .|+++++|+||++++|......    ..   .    ..+.......+.++
T Consensus       146 ----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~  221 (255)
T 2q2v_A          146 ----TGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFV  221 (255)
T ss_dssp             ----TTBHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTTCTTCCCB
T ss_pred             ----CCchhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHhccCCCCCCc
Confidence                2345799999999987752       6899999999999987432100    00   0    00101112234578


Q ss_pred             CHHHHHHHHHHHHhCCC-CccCcEEEEecCC
Q 016901          284 SNLQVAELLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       284 ~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      +++|+|++++.++.++. ...|++|++.++.
T Consensus       222 ~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~  252 (255)
T 2q2v_A          222 TPEHLGELVLFLCSEAGSQVRGAAWNVDGGW  252 (255)
T ss_dssp             CHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             CHHHHHHHHHHHhCCccCCCCCCEEEECCCc
Confidence            99999999999987643 3458899988874

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.92  E-value=2.7e-24  Score=198.46  Aligned_cols=219  Identities=16%  Similarity=0.092  Sum_probs=162.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .+++|+||||||+|+||++++++|+++|++|++++|+.++.++..+.+....            ..++.++++|++|.++
T Consensus        17 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~------------~~~~~~~~~Dv~~~~~   84 (266)
T 4egf_A           17 RLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQF------------GTDVHTVAIDLAEPDA   84 (266)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH------------CCCEEEEECCTTSTTH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc------------CCcEEEEEecCCCHHH
Confidence            4577999999999999999999999999999999999988877766654310            1579999999999988


Q ss_pred             HHHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHHH----cC-CCEEEEEccCCCCCC
Q 016901          157 IEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATI----AK-VNHFIMVSSLGTNKF  218 (380)
Q Consensus       157 ~~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~~----~~-v~r~V~~SS~~~~~~  218 (380)
                      ++++++       ++|+||||||......      .++...+++|+.|+.++++++..    .+ .++||++||......
T Consensus        85 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~  164 (266)
T 4egf_A           85 PAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAP  164 (266)
T ss_dssp             HHHHHHHHHHHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccC
Confidence            877763       7999999999654321      12334578999999998887743    33 459999999876432


Q ss_pred             CCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccc--cccceeeccCCcccCCCCCHHHHH
Q 016901          219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK--ETHNITLSQEDTLFGGQVSNLQVA  289 (380)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~--~~~~~~~~~~~~~~~~~i~~~DvA  289 (380)
                            ......|+.+|.+.+.+.+       ..|++++.|+||++.++.....  ..............+.+.+++|+|
T Consensus       165 ------~~~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva  238 (266)
T 4egf_A          165 ------LPDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPLGRFAVPHEVS  238 (266)
T ss_dssp             ------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHHTTCTTSSCBCHHHHH
T ss_pred             ------CCCChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChHHHHHHHhcCCCCCCcCHHHHH
Confidence                  1234579999999997765       2689999999999988742110  000000001112234578999999


Q ss_pred             HHHHHHHhCC-CCccCcEEEEecCC
Q 016901          290 ELLACMAKNR-SLSYCKVVEVIAET  313 (380)
Q Consensus       290 ~~i~~~l~~~-~~~~~~~~ni~~~~  313 (380)
                      ++++.++.+. ....|+++++.+|.
T Consensus       239 ~~v~~L~s~~~~~itG~~i~vdGG~  263 (266)
T 4egf_A          239 DAVVWLASDAASMINGVDIPVDGGY  263 (266)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHhCchhcCccCcEEEECCCc
Confidence            9999999764 33578999998875

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.92  E-value=1.4e-24  Score=199.60  Aligned_cols=224  Identities=12%  Similarity=0.049  Sum_probs=158.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++|+||||||+|+||++++++|+++|++|++++|+.++.....+.+....            ..++.++.+|++|.+++
T Consensus        12 ~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~------------~~~~~~~~~Dl~~~~~~   79 (265)
T 1h5q_A           12 FVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF------------GVKTKAYQCDVSNTDIV   79 (265)
T ss_dssp             CTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHH------------TCCEEEEECCTTCHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhc------------CCeeEEEEeeCCCHHHH
Confidence            467899999999999999999999999999999997765544433332110            15789999999999888


Q ss_pred             HHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHHHc----C-CCEEEEEccCCCCCCC
Q 016901          158 EPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIA----K-VNHFIMVSSLGTNKFG  219 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~~~----~-v~r~V~~SS~~~~~~~  219 (380)
                      +++++       .+|+||||||......      .++...+++|+.|+.++++++...    + .++||++||.......
T Consensus        80 ~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~  159 (265)
T 1h5q_A           80 TKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIIN  159 (265)
T ss_dssp             HHHHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC
T ss_pred             HHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccc
Confidence            77763       5899999999653221      122334789999999999887532    3 4799999997653322


Q ss_pred             Cc-hhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHH
Q 016901          220 FP-AAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAEL  291 (380)
Q Consensus       220 ~~-~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~  291 (380)
                      .. .....+...|+.+|.+.|.+++.       .|+++++||||+++++...................+.+++++|+|++
T Consensus       160 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  239 (265)
T 1h5q_A          160 QSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASNIPLNRFAQPEEMTGQ  239 (265)
T ss_dssp             EEETTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHTCTTSSCBCGGGGHHH
T ss_pred             cccccccccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccchhHHHHHHhcCcccCCCCHHHHHHH
Confidence            11 11222356799999999988752       58999999999999885321100000000011122457899999999


Q ss_pred             HHHHHhCCC-CccCcEEEEecCC
Q 016901          292 LACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       292 i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      ++.++.++. ...|++|++.+|.
T Consensus       240 ~~~l~~~~~~~~~G~~~~v~gG~  262 (265)
T 1h5q_A          240 AILLLSDHATYMTGGEYFIDGGQ  262 (265)
T ss_dssp             HHHHHSGGGTTCCSCEEEECTTG
T ss_pred             HHhhccCchhcCcCcEEEecCCE
Confidence            999997643 3468899998875

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.92  E-value=4.1e-24  Score=194.25  Aligned_cols=206  Identities=12%  Similarity=0.075  Sum_probs=154.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC-------eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCC
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGF-------RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLE  152 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~-------~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~  152 (380)
                      +|+||||||+|+||++++++|+++|+       +|++++|+.++.+.+.+.+...+             .++.++.+|++
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~D~~   68 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEG-------------ALTDTITADIS   68 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTT-------------CEEEEEECCTT
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccC-------------CeeeEEEecCC
Confidence            46899999999999999999999999       99999999887776665543211             57899999999


Q ss_pred             ChhcHHHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCC
Q 016901          153 KRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGT  215 (380)
Q Consensus       153 d~~~~~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~  215 (380)
                      |.++++++++       ++|+||||||......      .++...+++|+.|+.++++++.    +.+.++||++||...
T Consensus        69 ~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~  148 (244)
T 2bd0_A           69 DMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAA  148 (244)
T ss_dssp             SHHHHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             CHHHHHHHHHHHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchh
Confidence            9988887774       7999999999653221      1233447899999999988874    356789999999876


Q ss_pred             CCCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHH
Q 016901          216 NKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQV  288 (380)
Q Consensus       216 ~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~Dv  288 (380)
                      ....      .....|+.+|.+.+.+++       ..|+++++||||++++|.......       ..  ...+++++|+
T Consensus       149 ~~~~------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-------~~--~~~~~~~~dv  213 (244)
T 2bd0_A          149 TKAF------RHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDD-------EM--QALMMMPEDI  213 (244)
T ss_dssp             TSCC------TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCS-------TT--GGGSBCHHHH
T ss_pred             cCCC------CCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhccc-------cc--cccCCCHHHH
Confidence            4321      234579999999997764       368999999999999985321100       00  1257999999


Q ss_pred             HHHHHHHHhCCCC-ccCcEEEEecCC
Q 016901          289 AELLACMAKNRSL-SYCKVVEVIAET  313 (380)
Q Consensus       289 A~~i~~~l~~~~~-~~~~~~ni~~~~  313 (380)
                      |++++.++.++.. ..++++...+++
T Consensus       214 a~~~~~l~~~~~~~~~g~~~~~~~~~  239 (244)
T 2bd0_A          214 AAPVVQAYLQPSRTVVEEIILRPTSG  239 (244)
T ss_dssp             HHHHHHHHTSCTTEEEEEEEEEETTC
T ss_pred             HHHHHHHHhCCccccchheEEecccc
Confidence            9999999987542 245555555444

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.92  E-value=5.4e-24  Score=197.68  Aligned_cols=217  Identities=13%  Similarity=0.085  Sum_probs=161.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++|++|||||+|+||++++++|+++|++|++++|+.++..++.+.+.                .++.++.+|++|.+++
T Consensus        25 l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------------~~~~~~~~Dv~d~~~v   88 (277)
T 4dqx_A           25 LNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIG----------------SKAFGVRVDVSSAKDA   88 (277)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHC----------------TTEEEEECCTTCHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC----------------CceEEEEecCCCHHHH
Confidence            467899999999999999999999999999999999887766554321                5788999999999888


Q ss_pred             HHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCCCC
Q 016901          158 EPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~~~  220 (380)
                      +++++       ++|+||||||......      .++...+++|+.|+.++++++.    +.+.++||++||....... 
T Consensus        89 ~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-  167 (277)
T 4dqx_A           89 ESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAI-  167 (277)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCC-
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCC-
Confidence            87764       7999999999653221      1223347799999998888774    4455699999998764321 


Q ss_pred             chhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCC-ccccc--ccceee---ccCCcccCCCCCHHH
Q 016901          221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPT-DAYKE--THNITL---SQEDTLFGGQVSNLQ  287 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~-~~~~~--~~~~~~---~~~~~~~~~~i~~~D  287 (380)
                           .....|+.+|.+.+.+.+       ..|+++++|+||++.+|. .....  ......   .......+.+.+++|
T Consensus       168 -----~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ped  242 (277)
T 4dqx_A          168 -----ADRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEE  242 (277)
T ss_dssp             -----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTSTTCSCBCHHH
T ss_pred             -----CCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcCcccCCcCHHH
Confidence                 234579999999998765       268999999999998874 11000  000000   111223345789999


Q ss_pred             HHHHHHHHHhCCC-CccCcEEEEecCCCCC
Q 016901          288 VAELLACMAKNRS-LSYCKVVEVIAETTAP  316 (380)
Q Consensus       288 vA~~i~~~l~~~~-~~~~~~~ni~~~~~~s  316 (380)
                      +|++++.++.+.. ...|+++++.+|...+
T Consensus       243 vA~~v~~L~s~~~~~itG~~i~vdGG~~~~  272 (277)
T 4dqx_A          243 IAEAMLFLASDRSRFATGSILTVDGGSSIG  272 (277)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESSSSSSC
T ss_pred             HHHHHHHHhCCccCCCcCCEEEECCchhhh
Confidence            9999999997643 3569999999987653

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.92  E-value=1.8e-24  Score=197.52  Aligned_cols=215  Identities=12%  Similarity=0.059  Sum_probs=159.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .+++|++|||||+|+||++++++|+++|++|++++|+.++.++..+.+.                .++.++.+|++|.++
T Consensus         3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------------~~~~~~~~Dv~~~~~   66 (247)
T 3rwb_A            3 RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIG----------------KKARAIAADISDPGS   66 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC----------------TTEEECCCCTTCHHH
T ss_pred             CcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC----------------CceEEEEcCCCCHHH
Confidence            4578999999999999999999999999999999999887766654331                578999999999988


Q ss_pred             HHHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHH----HHHcC-CCEEEEEccCCCCCC
Q 016901          157 IEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDA----ATIAK-VNHFIMVSSLGTNKF  218 (380)
Q Consensus       157 ~~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a----~~~~~-v~r~V~~SS~~~~~~  218 (380)
                      ++++++       ++|+||||||......      .++...+++|+.|+.+++++    +++.+ .++||++||......
T Consensus        67 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  146 (247)
T 3rwb_A           67 VKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAG  146 (247)
T ss_dssp             HHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHT
T ss_pred             HHHHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccC
Confidence            887764       7999999999653322      12344588999999999887    45555 579999999754221


Q ss_pred             CCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccccc-ccceeeccCCcccCCCCCHHHHHH
Q 016901          219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE-THNITLSQEDTLFGGQVSNLQVAE  290 (380)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~-~~~~~~~~~~~~~~~~i~~~DvA~  290 (380)
                            ......|+.+|.+.+.+.+       .+|+++++|+||++.++...... .............+.+.+++|+|+
T Consensus       147 ------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~pedva~  220 (247)
T 3rwb_A          147 ------TPNMAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNEAFGFVEMLQAMKGKGQPEHIAD  220 (247)
T ss_dssp             ------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGGGHHHHHHHSSSCSCBCHHHHHH
T ss_pred             ------CCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhHHHHHHhcccccCCCcCHHHHHH
Confidence                  1234579999999987765       27999999999999876321110 000001111022345689999999


Q ss_pred             HHHHHHhCCC-CccCcEEEEecCC
Q 016901          291 LLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       291 ~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      ++..++.+.. ...|+++++.+|.
T Consensus       221 ~v~~L~s~~~~~itG~~i~vdGG~  244 (247)
T 3rwb_A          221 VVSFLASDDARWITGQTLNVDAGM  244 (247)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             HHHHHhCccccCCCCCEEEECCCc
Confidence            9999997653 3578999988875

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.92  E-value=2.4e-24  Score=201.82  Aligned_cols=220  Identities=14%  Similarity=0.114  Sum_probs=160.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCc--hhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCCh
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV--QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~  154 (380)
                      .+++|++|||||+|+||++++++|+++|++|+++.|+.  ...+.+.+.++..+             .++.++.+|++|.
T Consensus        46 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~Dv~d~  112 (294)
T 3r3s_A           46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECG-------------RKAVLLPGDLSDE  112 (294)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTT-------------CCEEECCCCTTSH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcC-------------CcEEEEEecCCCH
Confidence            45789999999999999999999999999999998873  33444444443322             5789999999999


Q ss_pred             hcHHHHh-------cCCCEEEEccccCcc-c------cCCCCCcchhhHHHHHHHHHHHHHcCC--CEEEEEccCCCCCC
Q 016901          155 VQIEPAL-------GNASVVICCIGASEK-E------VFDITGPYRIDFQATKNLVDAATIAKV--NHFIMVSSLGTNKF  218 (380)
Q Consensus       155 ~~~~~a~-------~~~d~Vi~~Ag~~~~-~------~~~~~~~~~~nv~g~~~ll~a~~~~~v--~r~V~~SS~~~~~~  218 (380)
                      +++++++       +++|+||||||.... .      ..++...+++|+.|+.++++++...-.  ++||++||......
T Consensus       113 ~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~  192 (294)
T 3r3s_A          113 SFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQP  192 (294)
T ss_dssp             HHHHHHHHHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSC
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccC
Confidence            8887766       479999999996431 1      112344588999999999999976543  49999999876432


Q ss_pred             CCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccc--cccceeeccCCcccCCCCCHHHHH
Q 016901          219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK--ETHNITLSQEDTLFGGQVSNLQVA  289 (380)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~--~~~~~~~~~~~~~~~~~i~~~DvA  289 (380)
                      .      .....|+.+|.+.+.+.+       ..|+++++|+||+|+++.....  ..............+.+.+++|+|
T Consensus       193 ~------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA  266 (294)
T 3r3s_A          193 S------PHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELA  266 (294)
T ss_dssp             C------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCGGGSTTTTTTSTTSSCBCGGGGH
T ss_pred             C------CCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCHHHHHHHHhcCCCCCCcCHHHHH
Confidence            1      234579999999998765       2599999999999998742110  001111111122334578999999


Q ss_pred             HHHHHHHhCCC-CccCcEEEEecCCCC
Q 016901          290 ELLACMAKNRS-LSYCKVVEVIAETTA  315 (380)
Q Consensus       290 ~~i~~~l~~~~-~~~~~~~ni~~~~~~  315 (380)
                      ++++.++.+.. ...|++|++.+|...
T Consensus       267 ~~v~~L~s~~~~~itG~~i~vdGG~~l  293 (294)
T 3r3s_A          267 PVYVYLASQESSYVTAEVHGVCGGEHL  293 (294)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             HHHHHHhCccccCCCCCEEEECCCccC
Confidence            99999997643 356899999988643

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.92  E-value=2.2e-24  Score=198.21  Aligned_cols=219  Identities=13%  Similarity=0.093  Sum_probs=153.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .++++++|||||+|+||++++++|+++|++|++++|+.++.+++.+.+.                .++.++.+|++|.++
T Consensus         6 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------------~~~~~~~~D~~~~~~   69 (261)
T 3n74_A            6 SLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIG----------------DAALAVAADISKEAD   69 (261)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC----------------TTEEEEECCTTSHHH
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC----------------CceEEEEecCCCHHH
Confidence            3467899999999999999999999999999999999988776655331                578999999999988


Q ss_pred             HHHHhc-------CCCEEEEccccCcc-c------cCCCCCcchhhHHHHHHHHHHHHH----cC----CCEEEEEccCC
Q 016901          157 IEPALG-------NASVVICCIGASEK-E------VFDITGPYRIDFQATKNLVDAATI----AK----VNHFIMVSSLG  214 (380)
Q Consensus       157 ~~~a~~-------~~d~Vi~~Ag~~~~-~------~~~~~~~~~~nv~g~~~ll~a~~~----~~----v~r~V~~SS~~  214 (380)
                      ++++++       ++|+||||||.... .      ..++...+++|+.|+.++++++..    .+    ..+||++||..
T Consensus        70 ~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~  149 (261)
T 3n74_A           70 VDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTG  149 (261)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTT
T ss_pred             HHHHHHHHHHhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchh
Confidence            887764       78999999996531 1      112334478999999888887642    21    34799999987


Q ss_pred             CCCCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccccc----ccceeeccCCcccCCCC
Q 016901          215 TNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE----THNITLSQEDTLFGGQV  283 (380)
Q Consensus       215 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~----~~~~~~~~~~~~~~~~i  283 (380)
                      .....      .....|+.+|.+.+.+.+       ..|+++++|+||++.++......    .............+.++
T Consensus       150 ~~~~~------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (261)
T 3n74_A          150 AGRPR------PNLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLL  223 (261)
T ss_dssp             TTSCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------CTTSSCC
T ss_pred             hcCCC------CCccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHHHHhhcCCcCCCc
Confidence            64321      234569999999998765       26899999999999887432110    00001111122234678


Q ss_pred             CHHHHHHHHHHHHhCCC-CccCcEEEEecCCCCCc
Q 016901          284 SNLQVAELLACMAKNRS-LSYCKVVEVIAETTAPL  317 (380)
Q Consensus       284 ~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~~~s~  317 (380)
                      +++|+|++++.++.... ...|+++++.+|...+.
T Consensus       224 ~~~dva~~~~~l~s~~~~~itG~~i~vdgG~~~~~  258 (261)
T 3n74_A          224 KPDDLAEAAAFLCSPQASMITGVALDVDGGRSIGG  258 (261)
T ss_dssp             CHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTC--
T ss_pred             CHHHHHHHHHHHcCCcccCcCCcEEEecCCcccCC
Confidence            99999999999996543 35789999999876643

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.92  E-value=1.1e-24  Score=201.96  Aligned_cols=218  Identities=14%  Similarity=0.054  Sum_probs=158.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .+++|++|||||+|+||++++++|+++|++|++++|+. ...+..+.+...             ..++.++.+|++|.++
T Consensus        28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~-~~~~~~~~~~~~-------------~~~~~~~~~Dv~d~~~   93 (273)
T 3uf0_A           28 SLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTD-GVKEVADEIADG-------------GGSAEAVVADLADLEG   93 (273)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESST-HHHHHHHHHHTT-------------TCEEEEEECCTTCHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHH-HHHHHHHHHHhc-------------CCcEEEEEecCCCHHH
Confidence            34778999999999999999999999999999999764 334444433321             1578999999999988


Q ss_pred             HHHHh------cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCCCC
Q 016901          157 IEPAL------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       157 ~~~a~------~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~~~  220 (380)
                      ++++.      +++|+||||||......      .++...+++|+.|+.++++++    ++.+.++||++||....... 
T Consensus        94 v~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~-  172 (273)
T 3uf0_A           94 AANVAEELAATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGG-  172 (273)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-
T ss_pred             HHHHHHHHHhcCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCC-
Confidence            77664      37999999999754322      123445889999999998876    45567899999998764321 


Q ss_pred             chhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccccccc--ceeeccCCcccCCCCCHHHHHHH
Q 016901          221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH--NITLSQEDTLFGGQVSNLQVAEL  291 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~--~~~~~~~~~~~~~~i~~~DvA~~  291 (380)
                           .....|+.+|.+.+.+.+       ..|+++++|+||++++|........  ...........+.+.+++|+|++
T Consensus       173 -----~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~  247 (273)
T 3uf0_A          173 -----RNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARIPAGRWATPEDMVGP  247 (273)
T ss_dssp             -----SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHSTTSSCBCGGGGHHH
T ss_pred             -----CCChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHH
Confidence                 234579999999998765       2789999999999998753211000  00000111223457899999999


Q ss_pred             HHHHHhCC-CCccCcEEEEecCCC
Q 016901          292 LACMAKNR-SLSYCKVVEVIAETT  314 (380)
Q Consensus       292 i~~~l~~~-~~~~~~~~ni~~~~~  314 (380)
                      ++.++.+. ....|+++++.+|..
T Consensus       248 v~~L~s~~a~~itG~~i~vdGG~~  271 (273)
T 3uf0_A          248 AVFLASDAASYVHGQVLAVDGGWL  271 (273)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHhCchhcCCcCCEEEECcCcc
Confidence            99999764 335789999988753

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.92  E-value=1e-24  Score=201.86  Aligned_cols=219  Identities=13%  Similarity=0.071  Sum_probs=164.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .+++|++|||||+|+||++++++|+++|++|++++|+.++.++..+++...+             .++.++.+|++|.++
T Consensus        23 ~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~-------------~~~~~~~~Dv~d~~~   89 (271)
T 4ibo_A           23 DLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVG-------------HDAEAVAFDVTSESE   89 (271)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTT-------------CCEEECCCCTTCHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------------CceEEEEcCCCCHHH
Confidence            3477899999999999999999999999999999999988887777665432             578999999999988


Q ss_pred             HHHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCCC
Q 016901          157 IEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       157 ~~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~~  219 (380)
                      ++++++       ++|+||||||......      .++...+++|+.|+.++++++.    +.+.++||++||...... 
T Consensus        90 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~-  168 (271)
T 4ibo_A           90 IIEAFARLDEQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELA-  168 (271)
T ss_dssp             HHHHHHHHHHHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSB-
T ss_pred             HHHHHHHHHHHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCC-
Confidence            887774       7999999999653221      2234458899999999977664    346679999999765332 


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccc--cceeeccCCcccCCCCCHHHHHH
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET--HNITLSQEDTLFGGQVSNLQVAE  290 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~--~~~~~~~~~~~~~~~i~~~DvA~  290 (380)
                           ......|+.+|.+.+.+.+       ..|+++++|+||++.++.......  ............+.+.+++|+|+
T Consensus       169 -----~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~  243 (271)
T 4ibo_A          169 -----RATVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPAKRWGKPQELVG  243 (271)
T ss_dssp             -----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHHHHSTTCSCBCGGGGHH
T ss_pred             -----CCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHH
Confidence                 1234579999999998765       268999999999999874321100  00000011122345789999999


Q ss_pred             HHHHHHhCCC-CccCcEEEEecCCC
Q 016901          291 LLACMAKNRS-LSYCKVVEVIAETT  314 (380)
Q Consensus       291 ~i~~~l~~~~-~~~~~~~ni~~~~~  314 (380)
                      +++.++.... ...|+++++.+|..
T Consensus       244 ~v~~L~s~~~~~itG~~i~vdGG~~  268 (271)
T 4ibo_A          244 TAVFLSASASDYVNGQIIYVDGGML  268 (271)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHhCccccCCCCcEEEECCCee
Confidence            9999987643 35789999988864

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.92  E-value=8.1e-24  Score=195.74  Aligned_cols=217  Identities=14%  Similarity=0.102  Sum_probs=156.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC-chhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS-VQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      +++++||||||+|+||++++++|+++|++|++++|+ .+..+.+.+.++..+             .++.++.+|++|.++
T Consensus        27 l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-------------~~~~~~~~D~~~~~~   93 (271)
T 4iin_A           27 FTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKG-------------YKAAVIKFDAASESD   93 (271)
T ss_dssp             CSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-------------CCEEEEECCTTCHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC-------------CceEEEECCCCCHHH
Confidence            467899999999999999999999999999999995 444455555444322             578999999999988


Q ss_pred             HHHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCCC
Q 016901          157 IEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       157 ~~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~~  219 (380)
                      +.++++       ++|+||||||......      .++...+++|+.|+.++++++.    +.+.++||++||...... 
T Consensus        94 v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-  172 (271)
T 4iin_A           94 FIEAIQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERG-  172 (271)
T ss_dssp             HHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC-
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCC-
Confidence            887764       7999999999654321      1233447899999988887764    456679999999754221 


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHH
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELL  292 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i  292 (380)
                           ......|+.+|.+.+.+++       ..|+++++|+||++.++...................+.+.+++|+|+++
T Consensus       173 -----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~i  247 (271)
T 4iin_A          173 -----NMGQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDELKADYVKNIPLNRLGSAKEVAEAV  247 (271)
T ss_dssp             -----CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC------------CGGGCTTCSCBCHHHHHHHH
T ss_pred             -----CCCchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcHHHHHHHHhcCCcCCCcCHHHHHHHH
Confidence                 1234679999999997765       2789999999999988743211111111111112234578999999999


Q ss_pred             HHHHhCCC-CccCcEEEEecCC
Q 016901          293 ACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       293 ~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      +.++.+.. ...|+++++.+|.
T Consensus       248 ~~l~s~~~~~itG~~i~vdGG~  269 (271)
T 4iin_A          248 AFLLSDHSSYITGETLKVNGGL  269 (271)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTS
T ss_pred             HHHhCCCcCCCcCCEEEeCCCe
Confidence            99997643 3578999998875

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.92  E-value=9.1e-24  Score=198.33  Aligned_cols=224  Identities=14%  Similarity=0.124  Sum_probs=160.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .+++++|+||||+|+||++++++|+++|++|++++|+.++.+.+.+.+....        ......++.++.+|++|.++
T Consensus        15 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--------~~~~~~~~~~~~~D~~~~~~   86 (303)
T 1yxm_A           15 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANL--------PPTKQARVIPIQCNIRNEEE   86 (303)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTS--------CTTCCCCEEEEECCTTCHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc--------cccCCccEEEEecCCCCHHH
Confidence            3467899999999999999999999999999999999887776666554310        00012578999999999988


Q ss_pred             HHHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHHH----cCCCEEEEEccCCCCCCC
Q 016901          157 IEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       157 ~~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~~----~~v~r~V~~SS~~~~~~~  219 (380)
                      ++++++       ++|+||||||......      .++...+++|+.|+.++++++..    .+.++||++||...  .+
T Consensus        87 v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~--~~  164 (303)
T 1yxm_A           87 VNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTK--AG  164 (303)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCT--TC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeecc--cC
Confidence            887764       5999999999543211      12234478999999999998754    23578999999872  22


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCc--cccc--ccceeeccCCcccCCCCCHHHH
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTD--AYKE--THNITLSQEDTLFGGQVSNLQV  288 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~--~~~~--~~~~~~~~~~~~~~~~i~~~Dv  288 (380)
                      .     .....|+.+|...+.+.+       ..|+++++||||+++||..  ....  .............+.+++++|+
T Consensus       165 ~-----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dv  239 (303)
T 1yxm_A          165 F-----PLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEV  239 (303)
T ss_dssp             C-----TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHH
T ss_pred             C-----CcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhcCcccCCCCHHHH
Confidence            1     223469999999887765       2589999999999999842  1110  0000000011122357899999


Q ss_pred             HHHHHHHHhCCC-CccCcEEEEecCCCC
Q 016901          289 AELLACMAKNRS-LSYCKVVEVIAETTA  315 (380)
Q Consensus       289 A~~i~~~l~~~~-~~~~~~~ni~~~~~~  315 (380)
                      |++++.++.+.. ...|++|++.+|...
T Consensus       240 A~~i~~l~~~~~~~~~G~~~~v~gG~~~  267 (303)
T 1yxm_A          240 SSVVCFLLSPAASFITGQSVDVDGGRSL  267 (303)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHhCcccccCCCcEEEECCCeec
Confidence            999999997643 346899999988644

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.92  E-value=5.8e-24  Score=197.39  Aligned_cols=220  Identities=13%  Similarity=0.116  Sum_probs=164.1

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .+++|++|||||+|+||++++++|+++|++|++++|+.++.+++.+++...+             .++.++.+|++|.++
T Consensus        29 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~Dl~d~~~   95 (276)
T 3r1i_A           29 DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVG-------------GKALPIRCDVTQPDQ   95 (276)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT-------------CCCEEEECCTTCHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------------CeEEEEEcCCCCHHH
Confidence            4577999999999999999999999999999999999988888777665432             578899999999998


Q ss_pred             HHHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHHH----cC-CCEEEEEccCCCCCC
Q 016901          157 IEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATI----AK-VNHFIMVSSLGTNKF  218 (380)
Q Consensus       157 ~~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~~----~~-v~r~V~~SS~~~~~~  218 (380)
                      ++++++       ++|+||||||......      .++...+++|+.|+.++++++..    .+ .++||++||......
T Consensus        96 v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~  175 (276)
T 3r1i_A           96 VRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHII  175 (276)
T ss_dssp             HHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhccc
Confidence            888774       7999999999654321      12333468999999999887743    33 268999999765332


Q ss_pred             CCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHH
Q 016901          219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAEL  291 (380)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~  291 (380)
                      ..+    .....|+.+|.+.+.+.+       ..|+++++|+||++.++....... ...........+.+.+++|+|++
T Consensus       176 ~~~----~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~-~~~~~~~~~p~~r~~~pedvA~~  250 (276)
T 3r1i_A          176 NIP----QQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLAD-YHALWEPKIPLGRMGRPEELTGL  250 (276)
T ss_dssp             CCS----SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGG-GHHHHGGGSTTSSCBCGGGSHHH
T ss_pred             CCC----CCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchH-HHHHHHhcCCCCCCcCHHHHHHH
Confidence            111    234579999999998765       268999999999999875322111 00011112223457899999999


Q ss_pred             HHHHHhCCC-CccCcEEEEecCCC
Q 016901          292 LACMAKNRS-LSYCKVVEVIAETT  314 (380)
Q Consensus       292 i~~~l~~~~-~~~~~~~ni~~~~~  314 (380)
                      ++.++.+.. ...|+++++.+|..
T Consensus       251 v~fL~s~~~~~itG~~i~vdGG~~  274 (276)
T 3r1i_A          251 YLYLASAASSYMTGSDIVIDGGYT  274 (276)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHHHcCccccCccCcEEEECcCcc
Confidence            999997643 35789999988753

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.92  E-value=4.4e-25  Score=201.29  Aligned_cols=214  Identities=15%  Similarity=0.095  Sum_probs=155.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .+++|+++||||+|+||++++++|+++|++|++++|++++.+++.                  ...++.++.+|++|.++
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~------------------~~~~~~~~~~D~~~~~~   64 (246)
T 2ag5_A            3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE------------------KYPGIQTRVLDVTKKKQ   64 (246)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG------------------GSTTEEEEECCTTCHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH------------------hccCceEEEeeCCCHHH
Confidence            346789999999999999999999999999999999876543321                  01368899999999988


Q ss_pred             HHHHh---cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCCCCchh
Q 016901          157 IEPAL---GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFPAA  223 (380)
Q Consensus       157 ~~~a~---~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~~~~~~  223 (380)
                      +++++   +++|+||||||......      .++...+++|+.|+.++++++.    +.+.++||++||........   
T Consensus        65 ~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---  141 (246)
T 2ag5_A           65 IDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGV---  141 (246)
T ss_dssp             HHHHHHHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCC---
T ss_pred             HHHHHHHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCC---
Confidence            87664   57999999999653321      1233447899999999988864    45678999999986643211   


Q ss_pred             hhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCccc-cc-----ccceeeccCCcccCCCCCHHHHHH
Q 016901          224 ILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAY-KE-----THNITLSQEDTLFGGQVSNLQVAE  290 (380)
Q Consensus       224 ~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~-~~-----~~~~~~~~~~~~~~~~i~~~DvA~  290 (380)
                        .....|+.+|.+.+.+++.       .|+++++||||++++|.... ..     .............+.+++++|+|+
T Consensus       142 --~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~  219 (246)
T 2ag5_A          142 --VNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAM  219 (246)
T ss_dssp             --TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHH
T ss_pred             --CCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCCCCCCCCHHHHHH
Confidence              1345799999999988763       59999999999999874221 00     000000000112345789999999


Q ss_pred             HHHHHHhCCC-CccCcEEEEecCC
Q 016901          291 LLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       291 ~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      +++.++.++. ...|+++++.+|.
T Consensus       220 ~v~~l~s~~~~~~tG~~i~vdgG~  243 (246)
T 2ag5_A          220 LCVYLASDESAYVTGNPVIIDGGW  243 (246)
T ss_dssp             HHHHHHSGGGTTCCSCEEEECTTG
T ss_pred             HHHHHhCccccCCCCCEEEECCCc
Confidence            9999997643 3468899888774

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.92  E-value=1.3e-24  Score=199.39  Aligned_cols=212  Identities=14%  Similarity=0.111  Sum_probs=153.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++|++|||||+|+||++++++|+++|++|++++|+.+...+..                   ..++.++.+|++|.+++
T Consensus         7 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-------------------~~~~~~~~~D~~~~~~v   67 (257)
T 3tl3_A            7 IRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVADL-------------------GDRARFAAADVTDEAAV   67 (257)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHT-------------------CTTEEEEECCTTCHHHH
T ss_pred             ecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHHHhc-------------------CCceEEEECCCCCHHHH
Confidence            46789999999999999999999999999999999665432211                   15789999999999988


Q ss_pred             HHHhc------CCCEEEEccccCcc----------ccCCCCCcchhhHHHHHHHHHHHHHc------------CCCEEEE
Q 016901          158 EPALG------NASVVICCIGASEK----------EVFDITGPYRIDFQATKNLVDAATIA------------KVNHFIM  209 (380)
Q Consensus       158 ~~a~~------~~d~Vi~~Ag~~~~----------~~~~~~~~~~~nv~g~~~ll~a~~~~------------~v~r~V~  209 (380)
                      +++++      ++|+||||||....          ...++...+++|+.|+.++++++...            +.++||+
T Consensus        68 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~  147 (257)
T 3tl3_A           68 ASALDLAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIIN  147 (257)
T ss_dssp             HHHHHHHHHHSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEE
T ss_pred             HHHHHHHHHhCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEE
Confidence            87774      89999999996421          22234455889999999999988642            3458999


Q ss_pred             EccCCCCCCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccccccc-ceeeccCCcccCC
Q 016901          210 VSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH-NITLSQEDTLFGG  281 (380)
Q Consensus       210 ~SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~-~~~~~~~~~~~~~  281 (380)
                      +||......      ......|+.+|.+.+.+.+       ..|+++++|+||++.++........ ...+.......+.
T Consensus       148 isS~~~~~~------~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~r  221 (257)
T 3tl3_A          148 TASVAAFDG------QIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLPEEARASLGKQVPHPSR  221 (257)
T ss_dssp             ECCCC--CC------HHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---CHHHHHHHHHTSSSSCS
T ss_pred             EcchhhcCC------CCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhccHHHHHHHHhcCCCCCC
Confidence            999876431      2344679999999987765       2689999999999988743211100 0011111112246


Q ss_pred             CCCHHHHHHHHHHHHhCCCCccCcEEEEecCCCC
Q 016901          282 QVSNLQVAELLACMAKNRSLSYCKVVEVIAETTA  315 (380)
Q Consensus       282 ~i~~~DvA~~i~~~l~~~~~~~~~~~ni~~~~~~  315 (380)
                      +.+++|+|++++.++.++ ...|+++++.+|...
T Consensus       222 ~~~p~dva~~v~~l~s~~-~itG~~i~vdGG~~~  254 (257)
T 3tl3_A          222 LGNPDEYGALAVHIIENP-MLNGEVIRLDGAIRM  254 (257)
T ss_dssp             CBCHHHHHHHHHHHHHCT-TCCSCEEEESTTC--
T ss_pred             ccCHHHHHHHHHHHhcCC-CCCCCEEEECCCccC
Confidence            789999999999999874 478999999888644

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.92  E-value=1e-23  Score=193.94  Aligned_cols=212  Identities=13%  Similarity=0.057  Sum_probs=152.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .+++|+||||||+|+||++++++|+++|++|++++|+.++..+..   ..               .++.++.+|++|.++
T Consensus        24 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~---~~---------------~~~~~~~~Dv~~~~~   85 (260)
T 3gem_A           24 TLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTEL---RQ---------------AGAVALYGDFSCETG   85 (260)
T ss_dssp             ---CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHH---HH---------------HTCEEEECCTTSHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHH---Hh---------------cCCeEEECCCCCHHH
Confidence            346789999999999999999999999999999999987643322   11               247889999999988


Q ss_pred             HHHHh-------cCCCEEEEccccCccccC-----CCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCCCC
Q 016901          157 IEPAL-------GNASVVICCIGASEKEVF-----DITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       157 ~~~a~-------~~~d~Vi~~Ag~~~~~~~-----~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~~~  220 (380)
                      +++++       +++|+||||||.......     ++...+++|+.|+.++++++.    +.+.++||++||....... 
T Consensus        86 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~-  164 (260)
T 3gem_A           86 IMAFIDLLKTQTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGS-  164 (260)
T ss_dssp             HHHHHHHHHHHCSCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCC-
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCC-
Confidence            88776       379999999996533221     223457899999999988774    4456799999997664321 


Q ss_pred             chhhhchhhHHHHHHHHHHHHHHH------CCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHH
Q 016901          221 PAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLAC  294 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~------~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~  294 (380)
                           .....|+.+|.+.+.+.+.      .++++++|+||.+.++.......  ..........+.+.+++|+|++++.
T Consensus       165 -----~~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~~~~--~~~~~~~~p~~r~~~~edva~~v~~  237 (260)
T 3gem_A          165 -----SKHIAYCATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKDDAAY--RANALAKSALGIEPGAEVIYQSLRY  237 (260)
T ss_dssp             -----SSCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC-----------------CCSCCCCCTHHHHHHHHH
T ss_pred             -----CCcHhHHHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCCCHHH--HHHHHhcCCCCCCCCHHHHHHHHHH
Confidence                 2345799999999987752      46999999999998874321110  0011111223346789999999999


Q ss_pred             HHhCCCCccCcEEEEecCCCC
Q 016901          295 MAKNRSLSYCKVVEVIAETTA  315 (380)
Q Consensus       295 ~l~~~~~~~~~~~ni~~~~~~  315 (380)
                      +++... ..|++|++.+|...
T Consensus       238 L~~~~~-itG~~i~vdGG~~~  257 (260)
T 3gem_A          238 LLDSTY-VTGTTLTVNGGRHV  257 (260)
T ss_dssp             HHHCSS-CCSCEEEESTTTTT
T ss_pred             HhhCCC-CCCCEEEECCCccc
Confidence            996544 67999999988754

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.92  E-value=5.6e-24  Score=195.88  Aligned_cols=199  Identities=21%  Similarity=0.201  Sum_probs=147.4

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCCh
Q 016901           75 ADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (380)
Q Consensus        75 ~~~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~  154 (380)
                      |..+.+++||||||+|+||++++++|+++|++|++++|+.++.+.+.+.+...+             .++.++.+|++|.
T Consensus        24 m~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~D~~~~   90 (262)
T 3rkr_A           24 MSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAG-------------GEAESHACDLSHS   90 (262)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------------CEEEEEECCTTCH
T ss_pred             hhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC-------------CceeEEEecCCCH
Confidence            344577899999999999999999999999999999999988887776665432             6789999999999


Q ss_pred             hcHHHHh-------cCCCEEEEccccCcc-c------cCCCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCC
Q 016901          155 VQIEPAL-------GNASVVICCIGASEK-E------VFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTN  216 (380)
Q Consensus       155 ~~~~~a~-------~~~d~Vi~~Ag~~~~-~------~~~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~  216 (380)
                      +++.+++       +.+|+||||||.... .      ..++...+++|+.|+.++++++.    +.+.++||++||....
T Consensus        91 ~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~  170 (262)
T 3rkr_A           91 DAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGK  170 (262)
T ss_dssp             HHHHHHHHHHHHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSS
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhc
Confidence            8887776       469999999996311 1      11233457899999999888764    4567899999998764


Q ss_pred             CCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHH
Q 016901          217 KFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVA  289 (380)
Q Consensus       217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA  289 (380)
                      ...      .....|+.+|.+.+.+++       ..|+++++|+||.+.++.....       .. ......+++++|+|
T Consensus       171 ~~~------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-------~~-~~~~~~~~~p~dvA  236 (262)
T 3rkr_A          171 NPV------ADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGL-------SA-KKSALGAIEPDDIA  236 (262)
T ss_dssp             CCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------------------------CCCHHHHH
T ss_pred             CCC------CCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCccccc-------cc-ccccccCCCHHHHH
Confidence            321      234579999999997765       2689999999999987642110       00 11123578999999


Q ss_pred             HHHHHHHhCCC
Q 016901          290 ELLACMAKNRS  300 (380)
Q Consensus       290 ~~i~~~l~~~~  300 (380)
                      ++++.++....
T Consensus       237 ~~v~~l~s~~~  247 (262)
T 3rkr_A          237 DVVALLATQAD  247 (262)
T ss_dssp             HHHHHHHTCCT
T ss_pred             HHHHHHhcCcc
Confidence            99999998755

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.92  E-value=4e-24  Score=195.98  Aligned_cols=208  Identities=18%  Similarity=0.153  Sum_probs=150.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .+++|+|+||||+|+||++++++|+++|++|++++|+.++.                        ..+.++.+|++|+++
T Consensus        18 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~------------------------~~~~~~~~Dl~d~~~   73 (253)
T 2nm0_A           18 SHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPP------------------------EGFLAVKCDITDTEQ   73 (253)
T ss_dssp             --CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCC------------------------TTSEEEECCTTSHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhh------------------------ccceEEEecCCCHHH
Confidence            44678999999999999999999999999999999986532                        347889999999988


Q ss_pred             HHHHhc-------CCCEEEEccccCcc------ccCCCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCCC
Q 016901          157 IEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       157 ~~~a~~-------~~d~Vi~~Ag~~~~------~~~~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~~  219 (380)
                      ++++++       .+|+||||||....      ...++...+++|+.|+.++++++.    +.+.++||++||...... 
T Consensus        74 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~-  152 (253)
T 2nm0_A           74 VEQAYKEIEETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLG-  152 (253)
T ss_dssp             HHHHHHHHHHHTCSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCC-
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCC-
Confidence            877763       58999999996532      122344457899999999888764    346789999999866321 


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHH
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELL  292 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i  292 (380)
                           ......|+.+|.+.+.+.+.       .|+++++|+||++.++...................+.+++++|+|+++
T Consensus       153 -----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~i  227 (253)
T 2nm0_A          153 -----SAGQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLTDEQRANIVSQVPLGRYARPEEIAATV  227 (253)
T ss_dssp             -----HHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC---------CHHHHHTTCTTCSCBCHHHHHHHH
T ss_pred             -----CCCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence                 12345799999999977652       689999999999987742110000000000111224578999999999


Q ss_pred             HHHHhCCC-CccCcEEEEecCCC
Q 016901          293 ACMAKNRS-LSYCKVVEVIAETT  314 (380)
Q Consensus       293 ~~~l~~~~-~~~~~~~ni~~~~~  314 (380)
                      +.++.++. ...|+++++.++..
T Consensus       228 ~~l~s~~~~~~tG~~i~vdGG~~  250 (253)
T 2nm0_A          228 RFLASDDASYITGAVIPVDGGLG  250 (253)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHHhCccccCCcCcEEEECCccc
Confidence            99997643 34688999888753

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.92  E-value=1.1e-23  Score=192.57  Aligned_cols=208  Identities=13%  Similarity=0.103  Sum_probs=146.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++|++|||||+|+||++++++|+++|++|++++|+.+..                   .    .++.++.+|++|.+++
T Consensus         5 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~-------------------~----~~~~~~~~D~~d~~~~   61 (250)
T 2fwm_X            5 FSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQE-------------------Q----YPFATEVMDVADAAQV   61 (250)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCSS-------------------C----CSSEEEECCTTCHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhhh-------------------c----CCceEEEcCCCCHHHH
Confidence            4678999999999999999999999999999999986420                   0    1378899999999988


Q ss_pred             HHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCCCC
Q 016901          158 EPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~~~  220 (380)
                      +++++       ++|+||||||......      .++...+++|+.|+.++++++    ++.+.++||++||......  
T Consensus        62 ~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~--  139 (250)
T 2fwm_X           62 AQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTP--  139 (250)
T ss_dssp             HHHHHHHHHHCSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC--
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCC--
Confidence            88774       7999999999653221      123345789999999998887    4556789999999876432  


Q ss_pred             chhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcccc--cccce--eecc------CCcccCCCC
Q 016901          221 PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK--ETHNI--TLSQ------EDTLFGGQV  283 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~--~~~~~--~~~~------~~~~~~~~i  283 (380)
                          ......|+.+|.+.+.+.+.       .|+++++|+||++++|.....  .....  .+..      .....+.+.
T Consensus       140 ----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~  215 (250)
T 2fwm_X          140 ----RIGMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIA  215 (250)
T ss_dssp             ----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------------------------------------
T ss_pred             ----CCCCchHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccChhHHHHHHhhhhhcccccCCCCCCc
Confidence                12345799999999987652       599999999999998853211  00000  0100      011223468


Q ss_pred             CHHHHHHHHHHHHhCCC-CccCcEEEEecCCC
Q 016901          284 SNLQVAELLACMAKNRS-LSYCKVVEVIAETT  314 (380)
Q Consensus       284 ~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~~  314 (380)
                      +++|+|++++.++.++. ...|+++++.+|..
T Consensus       216 ~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~  247 (250)
T 2fwm_X          216 RPQEIANTILFLASDLASHITLQDIVVDGGST  247 (250)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             CHHHHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence            99999999999997643 35688999888753

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.92  E-value=2.9e-24  Score=197.53  Aligned_cols=222  Identities=13%  Similarity=0.070  Sum_probs=155.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-eCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAG-VRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l-~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~  155 (380)
                      .+++|++|||||+|+||++++++|+++|++|+++ .|+.+......+.+...+             .++.++.+|++|.+
T Consensus         5 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~Dv~~~~   71 (259)
T 3edm_A            5 RFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLG-------------RSALAIKADLTNAA   71 (259)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTT-------------SCCEEEECCTTCHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC-------------CceEEEEcCCCCHH
Confidence            4578899999999999999999999999999998 456666665555554322             57899999999998


Q ss_pred             cHHHHhc-------CCCEEEEccccC-ccccC------CCCCcchhhHHHHHHHHHHHHHcCC--CEEEEEccCCCCCCC
Q 016901          156 QIEPALG-------NASVVICCIGAS-EKEVF------DITGPYRIDFQATKNLVDAATIAKV--NHFIMVSSLGTNKFG  219 (380)
Q Consensus       156 ~~~~a~~-------~~d~Vi~~Ag~~-~~~~~------~~~~~~~~nv~g~~~ll~a~~~~~v--~r~V~~SS~~~~~~~  219 (380)
                      +++++++       ++|+||||||.. .....      ++...+++|+.|+.++++++...-.  ++||++||......+
T Consensus        72 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  151 (259)
T 3edm_A           72 EVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGG  151 (259)
T ss_dssp             HHHHHHHHHHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCC
T ss_pred             HHHHHHHHHHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCC
Confidence            8887764       799999999854 21111      1234478999999999999976532  489999997653111


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHHH------CCCCEEEEecCcccCCCccccc-ccceeeccCCcccCCCCCHHHHHHHH
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKE-THNITLSQEDTLFGGQVSNLQVAELL  292 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~------~g~~~~ivRpg~v~gp~~~~~~-~~~~~~~~~~~~~~~~i~~~DvA~~i  292 (380)
                           ......|+.+|.+.+.+.+.      .+++++.|+||++.++...... .............+.+.+++|+|+++
T Consensus       152 -----~~~~~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v  226 (259)
T 3edm_A          152 -----GPGALAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFTKPEVRERVAGATSLKREGSSEDVAGLV  226 (259)
T ss_dssp             -----STTCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC----------------------CCBCHHHHHHHH
T ss_pred             -----CCCcHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCcccccccChHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence                 12345799999999987752      3499999999999887432111 11111111122234568999999999


Q ss_pred             HHHHhCCC-CccCcEEEEecCCCCC
Q 016901          293 ACMAKNRS-LSYCKVVEVIAETTAP  316 (380)
Q Consensus       293 ~~~l~~~~-~~~~~~~ni~~~~~~s  316 (380)
                      +.++.+.. ...|++|++.++....
T Consensus       227 ~~L~s~~~~~itG~~i~vdGg~~~~  251 (259)
T 3edm_A          227 AFLASDDAAYVTGACYDINGGVLFS  251 (259)
T ss_dssp             HHHHSGGGTTCCSCEEEESBCSSBC
T ss_pred             HHHcCccccCccCCEEEECCCcCCC
Confidence            99997653 3579999998887553

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.92  E-value=6.5e-24  Score=195.66  Aligned_cols=215  Identities=13%  Similarity=0.074  Sum_probs=158.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .+++|+++||||+|+||++++++|+++|++|++++|+.++.++..+.+                ..++.++.+|++|.++
T Consensus         3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----------------~~~~~~~~~D~~~~~~   66 (263)
T 2a4k_A            3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL----------------EAEAIAVVADVSDPKA   66 (263)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC----------------CSSEEEEECCTTSHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----------------cCceEEEEcCCCCHHH
Confidence            346789999999999999999999999999999999987766544311                0468899999999988


Q ss_pred             HHHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHHHcC--CCEEEEEccCCCCCCCCc
Q 016901          157 IEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIAK--VNHFIMVSSLGTNKFGFP  221 (380)
Q Consensus       157 ~~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~~~~--v~r~V~~SS~~~~~~~~~  221 (380)
                      ++++++       .+|+||||||......      .++...+++|+.|+.++++++...-  .++||++||....  +  
T Consensus        67 v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~--~--  142 (263)
T 2a4k_A           67 VEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL--G--  142 (263)
T ss_dssp             HHHHHHHHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC--C--
T ss_pred             HHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhc--C--
Confidence            877763       6899999999653221      1223447899999999999987642  3599999998774  2  


Q ss_pred             hhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHH
Q 016901          222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLAC  294 (380)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~  294 (380)
                         ......|+.+|.+.+.+.+       ..|+++++|+||++.++...................+.+.+++|+|++++.
T Consensus       143 ---~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~  219 (263)
T 2a4k_A          143 ---AFGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGASPLGRAGRPEEVAQAALF  219 (263)
T ss_dssp             ---HHHHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHHHHHHHHHTSTTCSCBCHHHHHHHHHH
T ss_pred             ---CCCcHHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence               1234579999998887765       268999999999999874321100000000011122457899999999999


Q ss_pred             HHhCCC-CccCcEEEEecCCC
Q 016901          295 MAKNRS-LSYCKVVEVIAETT  314 (380)
Q Consensus       295 ~l~~~~-~~~~~~~ni~~~~~  314 (380)
                      ++.+.. ...|+++++.++..
T Consensus       220 l~s~~~~~~tG~~i~vdgG~~  240 (263)
T 2a4k_A          220 LLSEESAYITGQALYVDGGRS  240 (263)
T ss_dssp             HHSGGGTTCCSCEEEESTTTT
T ss_pred             HhCccccCCcCCEEEECCCcc
Confidence            997643 35688999888864

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.92  E-value=8e-24  Score=193.35  Aligned_cols=210  Identities=16%  Similarity=0.110  Sum_probs=149.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      |+++||||+|+||++++++|+++|++|++++|+.++.+++.+.+.                .++.++.+|++|.++++++
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------------~~~~~~~~Dv~~~~~v~~~   64 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG----------------DNLYIAQLDVRNRAAIEEM   64 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC----------------TTEEEEECCTTCHHHHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----------------CceEEEEcCCCCHHHHHHH
Confidence            579999999999999999999999999999999877666544321                4688999999999999888


Q ss_pred             hc-------CCCEEEEccccCc-cc------cCCCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCCCCch
Q 016901          161 LG-------NASVVICCIGASE-KE------VFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFPA  222 (380)
Q Consensus       161 ~~-------~~d~Vi~~Ag~~~-~~------~~~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~~~~~  222 (380)
                      ++       ++|+||||||... ..      ..++...+++|+.|+.++++++.    +.+.++||++||.......   
T Consensus        65 ~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~---  141 (248)
T 3asu_A           65 LASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPY---  141 (248)
T ss_dssp             HHTSCTTTCCCCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC---
T ss_pred             HHHHHHhCCCCCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCC---
Confidence            74       6899999999642 11      11233458899999988888775    4567899999998664321   


Q ss_pred             hhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCccc-CCCcccccccceeeccCCcccCCCCCHHHHHHHHHH
Q 016901          223 AILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGME-RPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLAC  294 (380)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~-gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~  294 (380)
                         .....|+.+|.+.+.+.+.       .|+++++|+||++. ++.....................+++++|+|++++.
T Consensus       142 ---~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~  218 (248)
T 3asu_A          142 ---AGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWW  218 (248)
T ss_dssp             ---TTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC----------------------CCBCHHHHHHHHHH
T ss_pred             ---CCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhcccCchHHHHHHHhccCCCCHHHHHHHHHH
Confidence               2345799999999988652       58999999999999 563211000000000000001124799999999999


Q ss_pred             HHhCCCCccCcEEEEecC
Q 016901          295 MAKNRSLSYCKVVEVIAE  312 (380)
Q Consensus       295 ~l~~~~~~~~~~~ni~~~  312 (380)
                      ++.++....+..+.+...
T Consensus       219 l~s~~~~~~g~~i~v~~~  236 (248)
T 3asu_A          219 VSTLPAHVNINTLEMMPV  236 (248)
T ss_dssp             HHHSCTTCCCCEEEECCT
T ss_pred             HhcCCccceeeEEEEccc
Confidence            999876566777777654

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.92  E-value=1.9e-24  Score=199.93  Aligned_cols=217  Identities=14%  Similarity=0.111  Sum_probs=158.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++|++|||||+|+||++++++|+++|++|++++|++++.+.+.+.+                 .++.++.+|++|.+++
T Consensus         7 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----------------~~~~~~~~Dv~d~~~v   69 (270)
T 1yde_A            7 YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL-----------------PGAVFILCDVTQEDDV   69 (270)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-----------------TTEEEEECCTTSHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----------------cCCeEEEcCCCCHHHH
Confidence            46789999999999999999999999999999999987766544321                 3578899999999888


Q ss_pred             HHHhc-------CCCEEEEccccCcc-cc------CCCCCcchhhHHHHHHHHHHHHH---cCCCEEEEEccCCCCCCCC
Q 016901          158 EPALG-------NASVVICCIGASEK-EV------FDITGPYRIDFQATKNLVDAATI---AKVNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~~-~~------~~~~~~~~~nv~g~~~ll~a~~~---~~v~r~V~~SS~~~~~~~~  220 (380)
                      +++++       ++|+||||||.... ..      .++...+++|+.|+.++++++..   .+.++||++||......  
T Consensus        70 ~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~--  147 (270)
T 1yde_A           70 KTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIG--  147 (270)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHC--
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCC--
Confidence            87764       79999999996432 11      12234578999999999988753   12479999999644211  


Q ss_pred             chhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcccc-cc-cce--eec--cCCcccCCCCCHHH
Q 016901          221 PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-ET-HNI--TLS--QEDTLFGGQVSNLQ  287 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~-~~-~~~--~~~--~~~~~~~~~i~~~D  287 (380)
                          ......|+.+|.+.+.+.+.       +|+++++|+||++++|..... .. ...  .+.  ......+.+.+++|
T Consensus       148 ----~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~d  223 (270)
T 1yde_A          148 ----QAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAE  223 (270)
T ss_dssp             ----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHH
T ss_pred             ----CCCCcccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCCCCCCcCHHH
Confidence                12235799999999987652       689999999999998742110 00 000  000  01122345689999


Q ss_pred             HHHHHHHHHhCCCCccCcEEEEecCCCCCc
Q 016901          288 VAELLACMAKNRSLSYCKVVEVIAETTAPL  317 (380)
Q Consensus       288 vA~~i~~~l~~~~~~~~~~~ni~~~~~~s~  317 (380)
                      +|++++.++.+.....|+++++.+|.....
T Consensus       224 va~~v~~L~s~~~~itG~~i~vdGG~~~~~  253 (270)
T 1yde_A          224 VGAAAVFLASEANFCTGIELLVTGGAELGY  253 (270)
T ss_dssp             HHHHHHHHHHHCTTCCSCEEEESTTTTSCC
T ss_pred             HHHHHHHHcccCCCcCCCEEEECCCeeccc
Confidence            999999998764456789999999875543

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.92  E-value=2.8e-23  Score=189.51  Aligned_cols=202  Identities=15%  Similarity=0.164  Sum_probs=148.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++|+++||||+|+||++++++|+++|++|++++|+.++.+.+.+.+...+             .++.++.+|++|.+++
T Consensus         5 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-------------~~~~~~~~Dv~~~~~~   71 (247)
T 2jah_A            5 LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAG-------------AKVHVLELDVADRQGV   71 (247)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------------CCEEEEECCTTCHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-------------CcEEEEECCCCCHHHH
Confidence            467899999999999999999999999999999999888777666554321             5788999999999888


Q ss_pred             HHHh-------cCCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCCCC
Q 016901          158 EPAL-------GNASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       158 ~~a~-------~~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~~~  220 (380)
                      ++++       +++|+||||||.......      ++...+++|+.|+.++++++.    +.+ ++||++||....... 
T Consensus        72 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~-  149 (247)
T 2jah_A           72 DAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNV-  149 (247)
T ss_dssp             HHHHHHHHHHHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCC-
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCC-
Confidence            8776       379999999996532211      223347899999999888774    345 799999997664321 


Q ss_pred             chhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCC--CCCHHHHHHH
Q 016901          221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGG--QVSNLQVAEL  291 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~--~i~~~DvA~~  291 (380)
                           .....|+.+|.+.+.+.+       ..|+++++|+||++.++........... .......+.  +++++|+|++
T Consensus       150 -----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~~~~pedvA~~  223 (247)
T 2jah_A          150 -----RNAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHTATK-EMYEQRISQIRKLQAQDIAEA  223 (247)
T ss_dssp             -----TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCCHHHH-HHHHHHTTTSCCBCHHHHHHH
T ss_pred             -----CCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccchhhH-HHHHhcccccCCCCHHHHHHH
Confidence                 234579999999987765       3699999999999988742211000000 000000012  3899999999


Q ss_pred             HHHHHhCCC
Q 016901          292 LACMAKNRS  300 (380)
Q Consensus       292 i~~~l~~~~  300 (380)
                      ++.++.++.
T Consensus       224 v~~l~s~~~  232 (247)
T 2jah_A          224 VRYAVTAPH  232 (247)
T ss_dssp             HHHHHHSCT
T ss_pred             HHHHhCCCc
Confidence            999998765

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.92  E-value=7.2e-24  Score=196.02  Aligned_cols=219  Identities=14%  Similarity=0.158  Sum_probs=160.1

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC-chhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS-VQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~  155 (380)
                      .+++|++|||||+|+||++++++|+++|++|+++.|+ .+..+.+.+.++..+             .++.++.+|++|.+
T Consensus        15 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~Dv~~~~   81 (270)
T 3is3_A           15 RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALG-------------SDAIAIKADIRQVP   81 (270)
T ss_dssp             CCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-------------CCEEEEECCTTSHH
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC-------------CcEEEEEcCCCCHH
Confidence            3577899999999999999999999999999998765 455566655554432             67899999999998


Q ss_pred             cHHHHh-------cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHHHcCC--CEEEEEccCCCCCCCC
Q 016901          156 QIEPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIAKV--NHFIMVSSLGTNKFGF  220 (380)
Q Consensus       156 ~~~~a~-------~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~~~~v--~r~V~~SS~~~~~~~~  220 (380)
                      ++++++       +++|+||||||......      .++...+++|+.|+.++++++...-.  ++||++||....... 
T Consensus        82 ~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-  160 (270)
T 3is3_A           82 EIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDFS-  160 (270)
T ss_dssp             HHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTCC-
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccCC-
Confidence            888776       37999999999753321      22344588999999999999876543  499999997642222 


Q ss_pred             chhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccccccc------c------eeeccCCcccCC
Q 016901          221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH------N------ITLSQEDTLFGG  281 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~------~------~~~~~~~~~~~~  281 (380)
                          ......|+.+|.+.+.+.+       ..|++++.|+||++.++........      .      ..........+.
T Consensus       161 ----~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r  236 (270)
T 3is3_A          161 ----VPKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHR  236 (270)
T ss_dssp             ----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTTCS
T ss_pred             ----CCCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCCCCC
Confidence                1234579999999998765       2689999999999998853210000      0      000011122345


Q ss_pred             CCCHHHHHHHHHHHHhCCC-CccCcEEEEecCC
Q 016901          282 QVSNLQVAELLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       282 ~i~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      +.+++|+|++++.++.+.. ...|+++++.+|.
T Consensus       237 ~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  269 (270)
T 3is3_A          237 NGWPQDVANVVGFLVSKEGEWVNGKVLTLDGGA  269 (270)
T ss_dssp             CBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             CCCHHHHHHHHHHHcCCccCCccCcEEEeCCCC
Confidence            6889999999999997543 3568999988774

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.92  E-value=4.2e-24  Score=195.68  Aligned_cols=213  Identities=15%  Similarity=0.113  Sum_probs=155.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++|++|||||+|+||++++++|+++|++|++++|+.++.+++.+.+   +             .++.++.+|++|.+++
T Consensus         4 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~-------------~~~~~~~~D~~~~~~v   67 (253)
T 1hxh_A            4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---G-------------ERSMFVRHDVSSEADW   67 (253)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---C-------------TTEEEECCCTTCHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---C-------------CceEEEEccCCCHHHH
Confidence            46789999999999999999999999999999999987766654432   1             5688999999999888


Q ss_pred             HHHh-------cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHH----HHHcCCCEEEEEccCCCCCCCC
Q 016901          158 EPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDA----ATIAKVNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       158 ~~a~-------~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a----~~~~~v~r~V~~SS~~~~~~~~  220 (380)
                      ++++       +.+|+||||||......      .++...+++|+.|+.+++++    +++.+ ++||++||....... 
T Consensus        68 ~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~-  145 (253)
T 1hxh_A           68 TLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPI-  145 (253)
T ss_dssp             HHHHHHHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCC-
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCC-
Confidence            7766       35899999999653221      12334478898887766654    44556 899999998764321 


Q ss_pred             chhhhchhhHHHHHHHHHHHHHHH-------C--CCCEEEEecCcccCCCccc-ccccce-e-ecc--CCcccCCCCCHH
Q 016901          221 PAAILNLFWGVLLWKRKAEEALIA-------S--GLPYTIVRPGGMERPTDAY-KETHNI-T-LSQ--EDTLFGGQVSNL  286 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~--g~~~~ivRpg~v~gp~~~~-~~~~~~-~-~~~--~~~~~~~~i~~~  286 (380)
                           .....|+.+|.+.+.+.+.       .  |+++++||||++++|.... ...... . +..  .....+.+.+++
T Consensus       146 -----~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  220 (253)
T 1hxh_A          146 -----EQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPE  220 (253)
T ss_dssp             -----TTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHH
T ss_pred             -----CCCccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccchhhhHHHHhhhhccCccCCCCCHH
Confidence                 2345799999999987652       3  9999999999999874321 000000 0 111  011234568999


Q ss_pred             HHHHHHHHHHhCCC-CccCcEEEEecCC
Q 016901          287 QVAELLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       287 DvA~~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      |+|++++.++.++. ...|+++++.++.
T Consensus       221 dvA~~~~~l~s~~~~~~tG~~~~vdgG~  248 (253)
T 1hxh_A          221 RIAQLVLFLASDESSVMSGSELHADNSI  248 (253)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESSSC
T ss_pred             HHHHHHHHHcCccccCCCCcEEEECCCc
Confidence            99999999997653 3468899988875

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.92  E-value=3.7e-23  Score=191.44  Aligned_cols=217  Identities=17%  Similarity=0.164  Sum_probs=159.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCc-hhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV-QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      +++|++|||||+|+||++++++|+++|++|+++.|+. +..+.+.+.++..+             .++.++.+|++|.++
T Consensus        29 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~-------------~~~~~~~~Dv~d~~~   95 (271)
T 3v2g_A           29 LAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAG-------------GRAVAIRADNRDAEA   95 (271)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-------------CCEEEEECCTTCHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC-------------CcEEEEECCCCCHHH
Confidence            4678999999999999999999999999999986654 55566555554432             678999999999988


Q ss_pred             HHHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHHHc--CCCEEEEEccCCCCCCCCc
Q 016901          157 IEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFP  221 (380)
Q Consensus       157 ~~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~~~--~v~r~V~~SS~~~~~~~~~  221 (380)
                      ++++++       ++|+||||||......      .++...+++|+.|+.++++++...  +.++||++||.......  
T Consensus        96 v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~~--  173 (271)
T 3v2g_A           96 IEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVP--  173 (271)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCCC--
T ss_pred             HHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccCC--
Confidence            887764       7999999999653221      123445789999999999998764  34699999996543221  


Q ss_pred             hhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHH
Q 016901          222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLAC  294 (380)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~  294 (380)
                         ......|+.+|.+.+.+.+       ..|+++++|+||++.++........ ..........+.+.+++|+|++++.
T Consensus       174 ---~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~r~~~pedvA~~v~f  249 (271)
T 3v2g_A          174 ---WPGISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGDH-AEAQRERIATGSYGEPQDIAGLVAW  249 (271)
T ss_dssp             ---STTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCSS-HHHHHHTCTTSSCBCHHHHHHHHHH
T ss_pred             ---CCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccchh-HHHHHhcCCCCCCCCHHHHHHHHHH
Confidence               1234579999999998765       2689999999999998753211100 0000111223456899999999999


Q ss_pred             HHhCC-CCccCcEEEEecCC
Q 016901          295 MAKNR-SLSYCKVVEVIAET  313 (380)
Q Consensus       295 ~l~~~-~~~~~~~~ni~~~~  313 (380)
                      ++... ....|+++++.+|.
T Consensus       250 L~s~~~~~itG~~i~vdGG~  269 (271)
T 3v2g_A          250 LAGPQGKFVTGASLTIDGGA  269 (271)
T ss_dssp             HHSGGGTTCCSCEEEESTTT
T ss_pred             HhCcccCCccCCEEEeCcCc
Confidence            98654 33578999988774

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.92  E-value=5.1e-24  Score=198.37  Aligned_cols=218  Identities=15%  Similarity=0.136  Sum_probs=158.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchh-HHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR-AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      +++|++|||||+|+||++++++|+++|++|++++|+.+. .+.+.+.+...+             .++.++.+|++|.++
T Consensus        27 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-------------~~~~~~~~D~~~~~~   93 (283)
T 1g0o_A           27 LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNG-------------SDAACVKANVGVVED   93 (283)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-------------CCEEEEECCTTCHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhC-------------CCeEEEEcCCCCHHH
Confidence            467899999999999999999999999999999998754 344444443321             578899999999988


Q ss_pred             HHHHh-------cCCCEEEEccccCccc------cCCCCCcchhhHHHHHHHHHHHHHc--CCCEEEEEccCCCCCCCCc
Q 016901          157 IEPAL-------GNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFP  221 (380)
Q Consensus       157 ~~~a~-------~~~d~Vi~~Ag~~~~~------~~~~~~~~~~nv~g~~~ll~a~~~~--~v~r~V~~SS~~~~~~~~~  221 (380)
                      +.+++       +++|+||||||.....      ..++...+++|+.|+.++++++...  +.++||++||........ 
T Consensus        94 ~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~-  172 (283)
T 1g0o_A           94 IVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAV-  172 (283)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSC-
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCCC-
Confidence            77665       4799999999965322      1123445889999999999999875  567999999976532211 


Q ss_pred             hhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccc-cc---------cc-e-eeccC-CcccCC
Q 016901          222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-ET---------HN-I-TLSQE-DTLFGG  281 (380)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~-~~---------~~-~-~~~~~-~~~~~~  281 (380)
                          .....|+.+|.+.+.+.+       ..|+++++|+||++.++..... ..         .. . .+... ....+.
T Consensus       173 ----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r  248 (283)
T 1g0o_A          173 ----PKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRR  248 (283)
T ss_dssp             ----SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCS
T ss_pred             ----CCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCCCCC
Confidence                124579999999998765       2689999999999998732110 00         00 0 00000 122345


Q ss_pred             CCCHHHHHHHHHHHHhCCC-CccCcEEEEecCC
Q 016901          282 QVSNLQVAELLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       282 ~i~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      +.+++|+|++++.++.+.. ...|+++++.+|.
T Consensus       249 ~~~p~dvA~~v~~l~s~~~~~itG~~i~vdgG~  281 (283)
T 1g0o_A          249 VGLPIDIARVVCFLASNDGGWVTGKVIGIDGGA  281 (283)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CcCHHHHHHHHHHHhCccccCcCCCEEEeCCCc
Confidence            7899999999999997643 3568899988774

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.92  E-value=1.2e-24  Score=200.62  Aligned_cols=218  Identities=12%  Similarity=0.090  Sum_probs=155.5

Q ss_pred             CCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh
Q 016901           78 KDDNLAFVAGAT--GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (380)
Q Consensus        78 ~~~~~vlVtGat--G~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~  155 (380)
                      +++++||||||+  |+||++++++|+++|++|++++|+. +..+..+.+....             +...++.+|++|.+
T Consensus         7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~-------------~~~~~~~~D~~~~~   72 (265)
T 1qsg_A            7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQL-------------GSDIVLQCDVAEDA   72 (265)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHT-------------TCCCEEECCTTCHH
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhc-------------CCcEEEEccCCCHH
Confidence            467899999999  9999999999999999999999987 3322222222110             23478899999999


Q ss_pred             cHHHHhc-------CCCEEEEccccCcc-----------ccCCCCCcchhhHHHHHHHHHHHHHcC--CCEEEEEccCCC
Q 016901          156 QIEPALG-------NASVVICCIGASEK-----------EVFDITGPYRIDFQATKNLVDAATIAK--VNHFIMVSSLGT  215 (380)
Q Consensus       156 ~~~~a~~-------~~d~Vi~~Ag~~~~-----------~~~~~~~~~~~nv~g~~~ll~a~~~~~--v~r~V~~SS~~~  215 (380)
                      +++++++       ++|+||||||....           ...++...+++|+.|+.++++++...-  .++||++||...
T Consensus        73 ~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~  152 (265)
T 1qsg_A           73 SIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGA  152 (265)
T ss_dssp             HHHHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGG
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhh
Confidence            8887764       68999999996531           112234458899999999999997642  258999999765


Q ss_pred             CCCCCchhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcccccc-cce-eeccCCcccCCCCCHH
Q 016901          216 NKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-HNI-TLSQEDTLFGGQVSNL  286 (380)
Q Consensus       216 ~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~~-~~~-~~~~~~~~~~~~i~~~  286 (380)
                      ...      ......|+.+|.+.+.+.+.       .|+++++|+||++++|....... ... .........+.+.+++
T Consensus       153 ~~~------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  226 (265)
T 1qsg_A          153 ERA------IPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIE  226 (265)
T ss_dssp             TSB------CTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHH
T ss_pred             ccC------CCCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccccHHHHHHHHhcCCCCCCCCHH
Confidence            321      12345699999999988752       58999999999999985321100 000 0000011223578999


Q ss_pred             HHHHHHHHHHhCCC-CccCcEEEEecCCCC
Q 016901          287 QVAELLACMAKNRS-LSYCKVVEVIAETTA  315 (380)
Q Consensus       287 DvA~~i~~~l~~~~-~~~~~~~ni~~~~~~  315 (380)
                      |+|++++.++.+.. ...|++|++.++...
T Consensus       227 dva~~v~~l~s~~~~~~tG~~~~vdgG~~~  256 (265)
T 1qsg_A          227 DVGNSAAFLCSDLSAGISGEVVHVDGGFSI  256 (265)
T ss_dssp             HHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHHhCchhcCccCCEEEECCCcCC
Confidence            99999999987543 346889999988643

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.92  E-value=4.2e-24  Score=199.80  Aligned_cols=220  Identities=11%  Similarity=0.081  Sum_probs=160.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhH-HHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRA-ENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~  155 (380)
                      .+++|+||||||+|+||++++++|+++|++|++++|+.+.. +...+.++..             ..++.++.+|++|.+
T Consensus        44 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~~Dv~d~~  110 (291)
T 3ijr_A           44 KLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKE-------------GVKCVLLPGDLSDEQ  110 (291)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT-------------TCCEEEEESCTTSHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc-------------CCcEEEEECCCCCHH
Confidence            45789999999999999999999999999999999987643 3333333322             157899999999998


Q ss_pred             cHHHHhc-------CCCEEEEccccCccc-------cCCCCCcchhhHHHHHHHHHHHHHcC--CCEEEEEccCCCCCCC
Q 016901          156 QIEPALG-------NASVVICCIGASEKE-------VFDITGPYRIDFQATKNLVDAATIAK--VNHFIMVSSLGTNKFG  219 (380)
Q Consensus       156 ~~~~a~~-------~~d~Vi~~Ag~~~~~-------~~~~~~~~~~nv~g~~~ll~a~~~~~--v~r~V~~SS~~~~~~~  219 (380)
                      +++++++       ++|+||||||.....       ..++...+++|+.|+.++++++...-  .++||++||...... 
T Consensus       111 ~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~-  189 (291)
T 3ijr_A          111 HCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEG-  189 (291)
T ss_dssp             HHHHHHHHHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHC-
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCC-
Confidence            8877763       799999999864321       11234458899999999999997642  359999999765321 


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccc-cccceeeccCCcccCCCCCHHHHHHH
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-ETHNITLSQEDTLFGGQVSNLQVAEL  291 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~-~~~~~~~~~~~~~~~~~i~~~DvA~~  291 (380)
                           ......|+.+|.+.+.+.+       ..|+++++|+||++++|..... ..............+.+.+++|+|++
T Consensus       190 -----~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~  264 (291)
T 3ijr_A          190 -----NETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQFGSNVPMQRPGQPYELAPA  264 (291)
T ss_dssp             -----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSCHHHHHHTTTTSTTSSCBCGGGTHHH
T ss_pred             -----CCCChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCCHHHHHHHHccCCCCCCcCHHHHHHH
Confidence                 1234579999999998765       2589999999999998842110 00001111122233457899999999


Q ss_pred             HHHHHhCCC-CccCcEEEEecCCCC
Q 016901          292 LACMAKNRS-LSYCKVVEVIAETTA  315 (380)
Q Consensus       292 i~~~l~~~~-~~~~~~~ni~~~~~~  315 (380)
                      ++.++.+.. ...|+++++.+|...
T Consensus       265 v~~L~s~~~~~itG~~i~vdGG~~~  289 (291)
T 3ijr_A          265 YVYLASSDSSYVTGQMIHVNGGVIV  289 (291)
T ss_dssp             HHHHHSGGGTTCCSCEEEESSSCCC
T ss_pred             HHHHhCCccCCCcCCEEEECCCccc
Confidence            999997643 356899999888643

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.92  E-value=3.5e-24  Score=198.92  Aligned_cols=221  Identities=12%  Similarity=0.081  Sum_probs=162.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .+++|++|||||+|+||++++++|+++|++|++++|+.++..+..+.+....            ..++.++.+|++|.++
T Consensus        24 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------------~~~~~~~~~Dv~~~~~   91 (277)
T 4fc7_A           24 LLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGAT------------GRRCLPLSMDVRAPPA   91 (277)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHH------------SSCEEEEECCTTCHHH
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc------------CCcEEEEEcCCCCHHH
Confidence            4578999999999999999999999999999999999887776665553210            1578999999999988


Q ss_pred             HHHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCCC
Q 016901          157 IEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       157 ~~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~~  219 (380)
                      ++++++       ++|+||||||......      .++...+++|+.|+.++++++.    +.+.++||++||...... 
T Consensus        92 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-  170 (277)
T 4fc7_A           92 VMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRG-  170 (277)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHT-
T ss_pred             HHHHHHHHHHHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCC-
Confidence            877763       7999999999543221      1234458899999999998874    344579999999755221 


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccc--cc-cceeeccCCcccCCCCCHHHHH
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK--ET-HNITLSQEDTLFGGQVSNLQVA  289 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~--~~-~~~~~~~~~~~~~~~i~~~DvA  289 (380)
                           ......|+.+|.+.+.+.+       ..|+++++|+||++.++.....  .. ............+.+.+++|+|
T Consensus       171 -----~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA  245 (277)
T 4fc7_A          171 -----QALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIA  245 (277)
T ss_dssp             -----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTSTTSSCBCHHHHH
T ss_pred             -----CCCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCCCCCCcCHHHHH
Confidence                 1234579999999998765       2689999999999998742110  00 0000011112234578999999


Q ss_pred             HHHHHHHhCC-CCccCcEEEEecCCCC
Q 016901          290 ELLACMAKNR-SLSYCKVVEVIAETTA  315 (380)
Q Consensus       290 ~~i~~~l~~~-~~~~~~~~ni~~~~~~  315 (380)
                      ++++.++.+. ....|+++++.+|...
T Consensus       246 ~~v~fL~s~~~~~itG~~i~vdGG~~~  272 (277)
T 4fc7_A          246 HSVLYLASPLASYVTGAVLVADGGAWL  272 (277)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTHHH
T ss_pred             HHHHHHcCCccCCcCCCEEEECCCccc
Confidence            9999999754 3357999999887543

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.92  E-value=2.2e-24  Score=198.47  Aligned_cols=218  Identities=11%  Similarity=0.081  Sum_probs=155.6

Q ss_pred             CCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh
Q 016901           78 KDDNLAFVAGAT--GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (380)
Q Consensus        78 ~~~~~vlVtGat--G~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~  155 (380)
                      +++|++|||||+  |+||++++++|+++|++|++++|+.+ ..+..+.+...             .+.+.++.+|++|.+
T Consensus         6 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~-------------~~~~~~~~~D~~~~~   71 (261)
T 2wyu_A            6 LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEA-------------LGGALLFRADVTQDE   71 (261)
T ss_dssp             CTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHH-------------TTCCEEEECCTTCHH
T ss_pred             CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHh-------------cCCcEEEECCCCCHH
Confidence            467899999999  99999999999999999999999875 22222222211             034788999999998


Q ss_pred             cHHHHhc-------CCCEEEEccccCcc----------ccCCCCCcchhhHHHHHHHHHHHHHcC--CCEEEEEccCCCC
Q 016901          156 QIEPALG-------NASVVICCIGASEK----------EVFDITGPYRIDFQATKNLVDAATIAK--VNHFIMVSSLGTN  216 (380)
Q Consensus       156 ~~~~a~~-------~~d~Vi~~Ag~~~~----------~~~~~~~~~~~nv~g~~~ll~a~~~~~--v~r~V~~SS~~~~  216 (380)
                      +++++++       ++|+||||||....          ...++...+++|+.|+.++++++...-  .++||++||.+..
T Consensus        72 ~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~  151 (261)
T 2wyu_A           72 ELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASE  151 (261)
T ss_dssp             HHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGT
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEeccccc
Confidence            8887764       78999999996532          111234458899999999999997641  2589999997653


Q ss_pred             CCCCchhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcccccc-cce-eeccCCcccCCCCCHHH
Q 016901          217 KFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-HNI-TLSQEDTLFGGQVSNLQ  287 (380)
Q Consensus       217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~~-~~~-~~~~~~~~~~~~i~~~D  287 (380)
                      ..      ......|+.+|.+.+.+.+.       .|+++++|+||++++|....... ... .........+.+.+++|
T Consensus       152 ~~------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~d  225 (261)
T 2wyu_A          152 KV------VPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEE  225 (261)
T ss_dssp             SB------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTHHHHHHHHHHHSTTSSCCCHHH
T ss_pred             CC------CCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccccHHHHHHHHhcCCCCCCCCHHH
Confidence            21      12345799999999987652       59999999999999985321100 000 00000112235689999


Q ss_pred             HHHHHHHHHhCCC-CccCcEEEEecCCCC
Q 016901          288 VAELLACMAKNRS-LSYCKVVEVIAETTA  315 (380)
Q Consensus       288 vA~~i~~~l~~~~-~~~~~~~ni~~~~~~  315 (380)
                      +|++++.++.... ...|++|++.++...
T Consensus       226 va~~v~~l~s~~~~~~tG~~~~vdgG~~~  254 (261)
T 2wyu_A          226 VGNLGLFLLSPLASGITGEVVYVDAGYHI  254 (261)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHcChhhcCCCCCEEEECCCccc
Confidence            9999999997533 346889999888644

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.92  E-value=6.4e-24  Score=196.03  Aligned_cols=199  Identities=15%  Similarity=0.122  Sum_probs=147.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++|+||||||+|+||++++++|+++|++|++++|+.++.+++.                   ..++.++.+|++|.+++
T Consensus        14 ~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-------------------~~~~~~~~~Dv~d~~~v   74 (266)
T 3p19_A           14 SMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALN-------------------LPNTLCAQVDVTDKYTF   74 (266)
T ss_dssp             -CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTC-------------------CTTEEEEECCTTCHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhh-------------------cCCceEEEecCCCHHHH
Confidence            36789999999999999999999999999999999977654321                   14788999999999888


Q ss_pred             HHHhc-------CCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCCCC
Q 016901          158 EPALG-------NASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~~~  220 (380)
                      +++++       ++|+||||||.......      ++...+++|+.|+.++++++    ++.+.++||++||....... 
T Consensus        75 ~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~-  153 (266)
T 3p19_A           75 DTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTF-  153 (266)
T ss_dssp             HHHHHHHHHHHCSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC-
T ss_pred             HHHHHHHHHHCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCC-
Confidence            87764       79999999997533221      22334789999999977665    45677899999998764321 


Q ss_pred             chhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccce--eeccCCcccCCCCCHHHHHHH
Q 016901          221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNI--TLSQEDTLFGGQVSNLQVAEL  291 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~--~~~~~~~~~~~~i~~~DvA~~  291 (380)
                           .....|+.+|.+.+.+.+       ..|+++++|+||++.++..........  .........+.+++++|+|++
T Consensus       154 -----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~a  228 (266)
T 3p19_A          154 -----PDHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAWRVDMGGVLAADDVARA  228 (266)
T ss_dssp             -----TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHHHHHHTTCCBCHHHHHHH
T ss_pred             -----CCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhhhHHHHhhcccccCCCCHHHHHHH
Confidence                 234579999999997765       269999999999999874321110000  000001123467999999999


Q ss_pred             HHHHHhCCCC
Q 016901          292 LACMAKNRSL  301 (380)
Q Consensus       292 i~~~l~~~~~  301 (380)
                      ++.++.++..
T Consensus       229 v~~l~~~~~~  238 (266)
T 3p19_A          229 VLFAYQQPQN  238 (266)
T ss_dssp             HHHHHHSCTT
T ss_pred             HHHHHcCCCC
Confidence            9999998764

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.92  E-value=9e-24  Score=195.67  Aligned_cols=212  Identities=12%  Similarity=0.073  Sum_probs=146.4

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .+.++++|||||+|+||++++++|+++|++|++++|+.++.++..+.+.                .++.++.+|++|.++
T Consensus        25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~----------------~~~~~~~~Dv~d~~~   88 (272)
T 4dyv_A           25 KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIG----------------DDALCVPTDVTDPDS   88 (272)
T ss_dssp             ---CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHT----------------SCCEEEECCTTSHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC----------------CCeEEEEecCCCHHH
Confidence            3467899999999999999999999999999999999887776655331                578999999999988


Q ss_pred             HHHHhc-------CCCEEEEccccCcc--c-----cCCCCCcchhhHHHHHHHHHHHH----HcC--CCEEEEEccCCCC
Q 016901          157 IEPALG-------NASVVICCIGASEK--E-----VFDITGPYRIDFQATKNLVDAAT----IAK--VNHFIMVSSLGTN  216 (380)
Q Consensus       157 ~~~a~~-------~~d~Vi~~Ag~~~~--~-----~~~~~~~~~~nv~g~~~ll~a~~----~~~--v~r~V~~SS~~~~  216 (380)
                      ++++++       ++|+||||||....  .     ..++...+++|+.|+.++++++.    +.+  .++||++||....
T Consensus        89 v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~  168 (272)
T 4dyv_A           89 VRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISAT  168 (272)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTT
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhc
Confidence            887764       79999999996432  1     11233458899999888887764    333  4699999998764


Q ss_pred             CCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHH
Q 016901          217 KFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVA  289 (380)
Q Consensus       217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA  289 (380)
                      ...      .....|+.+|.+.+.+.+       ..|+++++|+||.+.++......... .........+.+++++|+|
T Consensus       169 ~~~------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~-~~~~~~~~~~~~~~pedvA  241 (272)
T 4dyv_A          169 SPR------PYSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAGV-PQADLSIKVEPVMDVAHVA  241 (272)
T ss_dssp             SCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC-------------------------CHHHHH
T ss_pred             CCC------CCchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhcccc-hhhhhcccccCCCCHHHHH
Confidence            321      234579999999998865       26899999999999887432111100 0001111223578999999


Q ss_pred             HHHHHHHhCCCCccCcEEEEec
Q 016901          290 ELLACMAKNRSLSYCKVVEVIA  311 (380)
Q Consensus       290 ~~i~~~l~~~~~~~~~~~ni~~  311 (380)
                      ++++.++..+.......+.+..
T Consensus       242 ~~v~fL~s~~~~~~~~~i~i~~  263 (272)
T 4dyv_A          242 SAVVYMASLPLDANVQFMTIMA  263 (272)
T ss_dssp             HHHHHHHHSCTTSCCCEEEEEE
T ss_pred             HHHHHHhCCCCcCccceEEEec
Confidence            9999999987644444444443

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.92  E-value=2.1e-23  Score=190.17  Aligned_cols=212  Identities=16%  Similarity=0.079  Sum_probs=154.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++|+++||||+|+||++++++|+++|++|++++|+.++.+++.+.                  -++.++.+|++|.+++
T Consensus         3 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~------------------~~~~~~~~D~~~~~~~   64 (245)
T 1uls_A            3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEA------------------VGAHPVVMDVADPASV   64 (245)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT------------------TTCEEEECCTTCHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH------------------cCCEEEEecCCCHHHH
Confidence            3678999999999999999999999999999999998776554320                  1378899999999888


Q ss_pred             HHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHHH----cCCCEEEEEccCCCCCCCC
Q 016901          158 EPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~~----~~v~r~V~~SS~~~~~~~~  220 (380)
                      +++++       ++|+||||||......      .++...+++|+.|+.++++++..    .+.++||++||... . +.
T Consensus        65 ~~~~~~~~~~~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~-~-~~  142 (245)
T 1uls_A           65 ERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVY-L-GN  142 (245)
T ss_dssp             HHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGG-G-CC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccchh-c-CC
Confidence            87763       5999999999653221      12334478999999999887754    35679999999772 2 21


Q ss_pred             chhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHH
Q 016901          221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA  293 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~  293 (380)
                           .....|+.+|...+.+.+       ..|+++++|+||++.++...................+.+++++|+|++++
T Consensus       143 -----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~  217 (245)
T 1uls_A          143 -----LGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVREKAIAATPLGRAGKPLEVAYAAL  217 (245)
T ss_dssp             -----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHHHHHHHHTCTTCSCBCHHHHHHHHH
T ss_pred             -----CCchhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhcCHHHHHHHHhhCCCCCCcCHHHHHHHHH
Confidence                 223579999999987765       26899999999999887422100000000000112245789999999999


Q ss_pred             HHHhCCC-CccCcEEEEecCCC
Q 016901          294 CMAKNRS-LSYCKVVEVIAETT  314 (380)
Q Consensus       294 ~~l~~~~-~~~~~~~ni~~~~~  314 (380)
                      .++.++. ...|+++++.++..
T Consensus       218 ~l~s~~~~~~tG~~~~vdgG~~  239 (245)
T 1uls_A          218 FLLSDESSFITGQVLFVDGGRT  239 (245)
T ss_dssp             HHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHhCchhcCCcCCEEEECCCcc
Confidence            9997643 35688999888754

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.91  E-value=6e-24  Score=194.75  Aligned_cols=218  Identities=16%  Similarity=0.126  Sum_probs=156.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEe-CCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGV-RSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~-R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ..+++||||||+|+||++++++|+++|++|++++ |+.+......+.+...+             .++.++.+|++|.++
T Consensus        11 ~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~Dv~~~~~   77 (256)
T 3ezl_A           11 MSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALG-------------FDFYASEGNVGDWDS   77 (256)
T ss_dssp             --CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTT-------------CCCEEEECCTTCHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC-------------CeeEEEecCCCCHHH
Confidence            4678999999999999999999999999999988 66666555555444321             578999999999988


Q ss_pred             HHHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCCC
Q 016901          157 IEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       157 ~~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~~  219 (380)
                      ++++++       ++|+||||||......      .++...+++|+.|+.++++++    ++.+.++||++||...... 
T Consensus        78 v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-  156 (256)
T 3ezl_A           78 TKQAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKG-  156 (256)
T ss_dssp             HHHHHHHHHHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGS-
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccC-
Confidence            887764       7899999999654321      123345889999988777665    4566789999999765332 


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHH
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELL  292 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i  292 (380)
                           ......|+.+|.+.+.+.+       ..|+++++|+||++.++...................+.+.+++|+|+++
T Consensus       157 -----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  231 (256)
T 3ezl_A          157 -----QFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATIPVRRLGSPDEIGSIV  231 (256)
T ss_dssp             -----CSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHHHSTTSSCBCHHHHHHHH
T ss_pred             -----CCCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence                 1234579999999987765       2689999999999987642111000000000111234568999999999


Q ss_pred             HHHHhCC-CCccCcEEEEecCCC
Q 016901          293 ACMAKNR-SLSYCKVVEVIAETT  314 (380)
Q Consensus       293 ~~~l~~~-~~~~~~~~ni~~~~~  314 (380)
                      +.++... ....|++|++.+|..
T Consensus       232 ~~l~s~~~~~~tG~~i~vdgG~~  254 (256)
T 3ezl_A          232 AWLASEESGFSTGADFSLNGGLH  254 (256)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTSC
T ss_pred             HHHhCCcccCCcCcEEEECCCEe
Confidence            9998654 335689999988864

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.91  E-value=3.1e-24  Score=203.58  Aligned_cols=234  Identities=12%  Similarity=0.043  Sum_probs=169.3

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC----------chhHHHHHHHHHhhhhcccccccCCCCCCce
Q 016901           75 ADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS----------VQRAENLVQSVKQMKLDGELANKGIQPVEML  144 (380)
Q Consensus        75 ~~~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  144 (380)
                      |..++++++|||||+|+||++++++|+++|++|++++|+          .+..+...+.+...+             .++
T Consensus        22 m~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~   88 (322)
T 3qlj_A           22 MGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAG-------------GEA   88 (322)
T ss_dssp             CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTT-------------CEE
T ss_pred             hcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcC-------------CcE
Confidence            344578999999999999999999999999999999987          556666655554422             578


Q ss_pred             EEEEcCCCChhcHHHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHHHcC--------
Q 016901          145 ELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIAK--------  203 (380)
Q Consensus       145 ~~~~~Dl~d~~~~~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~~~~--------  203 (380)
                      .++.+|++|.+++.++++       ++|+||||||......      .++...+++|+.|+.++++++...-        
T Consensus        89 ~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~  168 (322)
T 3qlj_A           89 VADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGK  168 (322)
T ss_dssp             EEECCCTTSHHHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCC
Confidence            899999999988887764       7999999999654321      1234458899999999998874321        


Q ss_pred             --CCEEEEEccCCCCCCCCchhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcccccccceeecc
Q 016901          204 --VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQ  274 (380)
Q Consensus       204 --v~r~V~~SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~  274 (380)
                        -++||++||......      ......|+.+|.+.+.+.+.       .|+++++|+|| +.++..........   .
T Consensus       169 ~~~g~IV~isS~~~~~~------~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~~---~  238 (322)
T 3qlj_A          169 AVDGRIINTSSGAGLQG------SVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEMM---A  238 (322)
T ss_dssp             CCCEEEEEECCHHHHHC------BTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC------
T ss_pred             CCCcEEEEEcCHHHccC------CCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhhh---h
Confidence              148999999654221      12345799999999988752       78999999999 76553211100000   0


Q ss_pred             CCcccCCCCCHHHHHHHHHHHHhCCC-CccCcEEEEecCCCC-----------------CcchHHHHHHhcCCCC
Q 016901          275 EDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAETTA-----------------PLTPMEELLAKIPSQR  331 (380)
Q Consensus       275 ~~~~~~~~i~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~~~-----------------s~~~~~e~~~~~~~~~  331 (380)
                      .......+++++|+|++++.++.... ...|++|++.+|...                 +..++++.+.++++..
T Consensus       239 ~~~~~~~~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~  313 (322)
T 3qlj_A          239 TQDQDFDAMAPENVSPLVVWLGSAEARDVTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVADLLGKA  313 (322)
T ss_dssp             -----CCTTCGGGTHHHHHHHTSGGGGGCCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHHHHHHS
T ss_pred             ccccccCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHHHhhcc
Confidence            11111245789999999999987543 346899999887644                 6689999999988743

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.91  E-value=8.7e-24  Score=192.89  Aligned_cols=218  Identities=15%  Similarity=0.097  Sum_probs=163.1

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ++++|++|||||+++||+++++.|+++|++|++++|+.+++++..++++..+             .++.++++|++|+++
T Consensus         4 sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g-------------~~~~~~~~Dvt~~~~   70 (254)
T 4fn4_A            4 SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMG-------------KEVLGVKADVSKKKD   70 (254)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------------CCEEEEECCTTSHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcC-------------CcEEEEEccCCCHHH
Confidence            4588999999999999999999999999999999999999988888777643             678999999999988


Q ss_pred             HHHHh-------cCCCEEEEccccCcc-c-c-----CCCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCC
Q 016901          157 IEPAL-------GNASVVICCIGASEK-E-V-----FDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKF  218 (380)
Q Consensus       157 ~~~a~-------~~~d~Vi~~Ag~~~~-~-~-----~~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~  218 (380)
                      +++++       +++|++|||||.... . .     .++...+++|+.|+.++.+++    ++.+-.+||++||......
T Consensus        71 v~~~~~~~~~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~  150 (254)
T 4fn4_A           71 VEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRG  150 (254)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCS
T ss_pred             HHHHHHHHHHHcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCC
Confidence            87765       579999999995421 1 1     134445889999988777665    4556679999999866432


Q ss_pred             CCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccccc-ccc--e-eeccCCcccCCCCCHHH
Q 016901          219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE-THN--I-TLSQEDTLFGGQVSNLQ  287 (380)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~-~~~--~-~~~~~~~~~~~~i~~~D  287 (380)
                      .      .....|+.+|.....+.+       .+|++++.|.||+|.+|...... ...  . .........+.+..++|
T Consensus       151 ~------~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~R~g~ped  224 (254)
T 4fn4_A          151 G------FAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPED  224 (254)
T ss_dssp             S------SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHTTCCCCBCHHH
T ss_pred             C------CCChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCCCCCCCcCHHH
Confidence            1      223579999999987765       37999999999999877421110 000  0 00111112345678999


Q ss_pred             HHHHHHHHHhCCC-CccCcEEEEecCC
Q 016901          288 VAELLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       288 vA~~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      +|.+++.++.+.. +..|+++.+-+|-
T Consensus       225 iA~~v~fLaSd~a~~iTG~~i~VDGG~  251 (254)
T 4fn4_A          225 IANVIVFLASDEASFVNGDAVVVDGGL  251 (254)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHhCchhcCCcCCEEEeCCCc
Confidence            9999999997543 3578888887763

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.91  E-value=7e-24  Score=196.27  Aligned_cols=195  Identities=16%  Similarity=0.102  Sum_probs=149.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .+++++|+||||+|+||+++++.|+++|++|++++|+.++.+.+.+.++..+             .++.++.+|++|.++
T Consensus        28 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-------------~~~~~~~~Dl~~~~~   94 (272)
T 1yb1_A           28 SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLG-------------AKVHTFVVDCSNRED   94 (272)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------------CCEEEEECCTTCHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcC-------------CeEEEEEeeCCCHHH
Confidence            3567899999999999999999999999999999999887777666554321             578999999999988


Q ss_pred             HHHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCCC
Q 016901          157 IEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       157 ~~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~~  219 (380)
                      ++++++       ++|+||||||......      .++...+++|+.|+.++++++    ++.+.++||++||..+... 
T Consensus        95 v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-  173 (272)
T 1yb1_A           95 IYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVS-  173 (272)
T ss_dssp             HHHHHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCC-
T ss_pred             HHHHHHHHHHHCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCC-
Confidence            877764       7999999999653221      122345789999987777665    4567789999999876431 


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHHH----------CCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHH
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALIA----------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVA  289 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~----------~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA  289 (380)
                           ......|+.+|.+.+.+++.          .|+++++||||++.++....          .....+.+++++|+|
T Consensus       174 -----~~~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~----------~~~~~~~~~~~~dva  238 (272)
T 1yb1_A          174 -----VPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN----------PSTSLGPTLEPEEVV  238 (272)
T ss_dssp             -----HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC----------THHHHCCCCCHHHHH
T ss_pred             -----CCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcccc----------ccccccCCCCHHHHH
Confidence                 23456799999999877651          38999999999998774210          011124579999999


Q ss_pred             HHHHHHHhCCC
Q 016901          290 ELLACMAKNRS  300 (380)
Q Consensus       290 ~~i~~~l~~~~  300 (380)
                      ++++.++.++.
T Consensus       239 ~~i~~~~~~~~  249 (272)
T 1yb1_A          239 NRLMHGILTEQ  249 (272)
T ss_dssp             HHHHHHHHTTC
T ss_pred             HHHHHHHHcCC
Confidence            99999998765

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.91  E-value=3e-23  Score=196.93  Aligned_cols=225  Identities=17%  Similarity=0.162  Sum_probs=150.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCc-----hhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCC
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV-----QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLE  152 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~  152 (380)
                      +++|+||||||+|+||++++++|+++|++|++.+|+.     ++.+.+.+.+...+             .++.++.+|++
T Consensus         3 m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~-------------~~~~~~~~Dvt   69 (324)
T 3u9l_A            3 MSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDND-------------VDLRTLELDVQ   69 (324)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHT-------------CCEEEEECCTT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcC-------------CcEEEEEeecC
Confidence            3568999999999999999999999999999998863     33344433333221             57999999999


Q ss_pred             ChhcHHHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCC
Q 016901          153 KRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGT  215 (380)
Q Consensus       153 d~~~~~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~  215 (380)
                      |.++++++++       ++|+||||||......      .++...+++|+.|+.++++++    ++.+.++||++||.+.
T Consensus        70 d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~  149 (324)
T 3u9l_A           70 SQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSS  149 (324)
T ss_dssp             CHHHHHHHHHHHHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchh
Confidence            9998888775       8999999999653221      123344789999999999988    5667789999999876


Q ss_pred             CCCCCchhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcccccccce----------eeccC---
Q 016901          216 NKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNI----------TLSQE---  275 (380)
Q Consensus       216 ~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~~~~~----------~~~~~---  275 (380)
                      .....     .....|+.+|.++|.+.+.       .|+++++|+||.+.++...+......          .....   
T Consensus       150 ~~~~~-----~~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (324)
T 3u9l_A          150 AGGTP-----PYLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNAGLG  224 (324)
T ss_dssp             TSCCC-----SSCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHHHHTTTTTHH
T ss_pred             ccCCC-----CcchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhccccccCCH
Confidence            42211     2235699999999977652       69999999999998764322111000          00000   


Q ss_pred             -------CcccCCCCCHHHHHHHHHHHHhCCCCccCcEEEEecCCCCCcchHH
Q 016901          276 -------DTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPME  321 (380)
Q Consensus       276 -------~~~~~~~i~~~DvA~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~  321 (380)
                             ........+++|+|++++.++..+.......+. .++.......+.
T Consensus       225 ~~~~~~~~~l~~~~~~p~~vA~aiv~~~~~~~~~~~~~~~-~gp~~~~~~~~~  276 (324)
T 3u9l_A          225 EEIKKAFAAIVPPDADVSLVADAIVRVVGTASGKRPFRVH-VDPAEDGADVGF  276 (324)
T ss_dssp             HHHHHHHHHTSCTTCCTHHHHHHHHHHHTSCTTCCCSEEE-ECTTCCSHHHHH
T ss_pred             HHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCCCCeEEE-eCCcchHHHHHH
Confidence                   001112368999999999999887422234443 444333433333

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.91  E-value=1.5e-23  Score=196.90  Aligned_cols=217  Identities=14%  Similarity=0.127  Sum_probs=158.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC------------chhHHHHHHHHHhhhhcccccccCCCCCCceE
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS------------VQRAENLVQSVKQMKLDGELANKGIQPVEMLE  145 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  145 (380)
                      +++|++|||||+|+||++++++|+++|++|++++|+            .+...+..+.+...+             .++.
T Consensus        26 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~   92 (299)
T 3t7c_A           26 VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALG-------------RRII   92 (299)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTT-------------CCEE
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcC-------------CceE
Confidence            467899999999999999999999999999999987            445555544444322             6799


Q ss_pred             EEEcCCCChhcHHHHh-------cCCCEEEEccccCcccc-------CCCCCcchhhHHHHHHHHHHHHH----c-CCCE
Q 016901          146 LVECDLEKRVQIEPAL-------GNASVVICCIGASEKEV-------FDITGPYRIDFQATKNLVDAATI----A-KVNH  206 (380)
Q Consensus       146 ~~~~Dl~d~~~~~~a~-------~~~d~Vi~~Ag~~~~~~-------~~~~~~~~~nv~g~~~ll~a~~~----~-~v~r  206 (380)
                      ++.+|++|.+++++++       +++|+||||||......       .++...+++|+.|+.++++++..    . +.++
T Consensus        93 ~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~  172 (299)
T 3t7c_A           93 ASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGS  172 (299)
T ss_dssp             EEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEE
T ss_pred             EEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcE
Confidence            9999999998888776       37999999999653321       12334588999999999988643    2 3569


Q ss_pred             EEEEccCCCCCCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccc--------ccee
Q 016901          207 FIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET--------HNIT  271 (380)
Q Consensus       207 ~V~~SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~--------~~~~  271 (380)
                      ||++||.......      .....|+.+|.+.+.+.+       ..|+++++|+||++.+|.......        ....
T Consensus       173 Iv~isS~~~~~~~------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  246 (299)
T 3t7c_A          173 IVFTSSIGGLRGA------ENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPT  246 (299)
T ss_dssp             EEEECCGGGTSCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCC
T ss_pred             EEEECChhhccCC------CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccch
Confidence            9999997664321      234579999999997765       258999999999999885321000        0000


Q ss_pred             e-------ccCCcccCCCCCHHHHHHHHHHHHhCCC-CccCcEEEEecCC
Q 016901          272 L-------SQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       272 ~-------~~~~~~~~~~i~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      .       .......+.+.+++|+|++++.++.+.. ...|+++++.+|.
T Consensus       247 ~~~~~~~~~~~~~~p~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~  296 (299)
T 3t7c_A          247 VEDFQVASRQMHVLPIPYVEPADISNAILFLVSDDARYITGVSLPVDGGA  296 (299)
T ss_dssp             HHHHHHHHHHHSSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             hhHHHHHhhhhcccCcCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCCc
Confidence            0       0011112457899999999999997643 3578999998875

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.91  E-value=1.6e-23  Score=195.31  Aligned_cols=217  Identities=17%  Similarity=0.097  Sum_probs=158.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC----------------chhHHHHHHHHHhhhhcccccccCCCCC
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS----------------VQRAENLVQSVKQMKLDGELANKGIQPV  141 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (380)
                      +++|++|||||+|+||++++++|+++|++|++++|+                .++.++..+.+...             .
T Consensus         9 l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~   75 (286)
T 3uve_A            9 VEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGH-------------N   75 (286)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTT-------------T
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhc-------------C
Confidence            467899999999999999999999999999999887                44444444443322             1


Q ss_pred             CceEEEEcCCCChhcHHHHhc-------CCCEEEEccccCcccc-------CCCCCcchhhHHHHHHHHHHHHH----cC
Q 016901          142 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV-------FDITGPYRIDFQATKNLVDAATI----AK  203 (380)
Q Consensus       142 ~~v~~~~~Dl~d~~~~~~a~~-------~~d~Vi~~Ag~~~~~~-------~~~~~~~~~nv~g~~~ll~a~~~----~~  203 (380)
                      .++.++.+|++|.++++++++       ++|+||||||......       .++...+++|+.|+.++++++..    .+
T Consensus        76 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~  155 (286)
T 3uve_A           76 RRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGG  155 (286)
T ss_dssp             CCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             CceEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC
Confidence            679999999999988887763       7999999999653321       12334588999999999887743    23


Q ss_pred             -CCEEEEEccCCCCCCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccc--------
Q 016901          204 -VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET--------  267 (380)
Q Consensus       204 -v~r~V~~SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~--------  267 (380)
                       .++||++||.......      .....|+.+|.+.+.+.+       ..|+++++|+||++.+|.......        
T Consensus       156 ~~g~iv~isS~~~~~~~------~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~  229 (286)
T 3uve_A          156 RGGSIILTSSVGGLKAY------PHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDL  229 (286)
T ss_dssp             SCEEEEEECCGGGTSCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTS
T ss_pred             CCcEEEEECchhhccCC------CCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccc
Confidence             4689999998664321      234579999999997765       278999999999999885321000        


Q ss_pred             ccee-------eccCCcccCCCCCHHHHHHHHHHHHhCC-CCccCcEEEEecCC
Q 016901          268 HNIT-------LSQEDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET  313 (380)
Q Consensus       268 ~~~~-------~~~~~~~~~~~i~~~DvA~~i~~~l~~~-~~~~~~~~ni~~~~  313 (380)
                      ....       ........+.+.+++|+|++++.++.+. ....|+++++.+|.
T Consensus       230 ~~~~~~~~~~~~~~~~~~p~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~  283 (286)
T 3uve_A          230 ENPGPDDMAPICQMFHTLPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAGS  283 (286)
T ss_dssp             SSCCHHHHHHHHHTTCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             cccchhhHHHHHHhhhccCCCcCCHHHHHHHHHHHcCccccCCcCCEEeECCcc
Confidence            0000       0011112256789999999999999764 34578999998875

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.91  E-value=1.3e-23  Score=189.78  Aligned_cols=188  Identities=15%  Similarity=0.051  Sum_probs=135.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ++++|+||||+|+||++++++|+++|++|++++|+.++.+.+.+.+                 .++.++.+|++|.++++
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----------------~~~~~~~~D~~~~~~~~   66 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAEL-----------------EGALPLPGDVREEGDWA   66 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS-----------------TTCEEEECCTTCHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----------------hhceEEEecCCCHHHHH
Confidence            4578999999999999999999999999999999987665543311                 36889999999998887


Q ss_pred             HHh-------cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHH----HHHHcCCCEEEEEccCCCCCCCCc
Q 016901          159 PAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVD----AATIAKVNHFIMVSSLGTNKFGFP  221 (380)
Q Consensus       159 ~a~-------~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~----a~~~~~v~r~V~~SS~~~~~~~~~  221 (380)
                      +++       +++|+||||||......      .++...+++|+.|+.++++    .+++.+.++||++||.......  
T Consensus        67 ~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~--  144 (234)
T 2ehd_A           67 RAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPF--  144 (234)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCC--
T ss_pred             HHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCC--
Confidence            766       37999999999653221      1233447899999875554    4556677899999998764321  


Q ss_pred             hhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHH
Q 016901          222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLAC  294 (380)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~  294 (380)
                          .....|+.+|.+.+.+++       ..|+++++||||++.++.....       ..  . + .+++++|+|++++.
T Consensus       145 ----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-------~~--~-~-~~~~~~dvA~~~~~  209 (234)
T 2ehd_A          145 ----KGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGNT-------PG--Q-A-WKLKPEDVAQAVLF  209 (234)
T ss_dssp             ----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC---------------------------CCHHHHHHHHHH
T ss_pred             ----CCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCccccc-------cc--c-c-CCCCHHHHHHHHHH
Confidence                234579999999887764       2689999999999987632110       00  0 1 15899999999999


Q ss_pred             HHhCCC
Q 016901          295 MAKNRS  300 (380)
Q Consensus       295 ~l~~~~  300 (380)
                      ++.++.
T Consensus       210 l~~~~~  215 (234)
T 2ehd_A          210 ALEMPG  215 (234)
T ss_dssp             HHHSCC
T ss_pred             HhCCCc
Confidence            998765

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.91  E-value=2.3e-23  Score=192.29  Aligned_cols=222  Identities=13%  Similarity=0.123  Sum_probs=162.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++|++|||||+|+||++++++|+++|++|++++|+.++.++..+++.....           ...+.++.+|++|.+++
T Consensus         8 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-----------~~~~~~~~~D~~~~~~~   76 (267)
T 3t4x_A            8 LKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYP-----------DAILQPVVADLGTEQGC   76 (267)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCT-----------TCEEEEEECCTTSHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCC-----------CceEEEEecCCCCHHHH
Confidence            4678999999999999999999999999999999999888777766654310           14678899999999888


Q ss_pred             HHHhc---CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCCCCchhh
Q 016901          158 EPALG---NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGFPAAI  224 (380)
Q Consensus       158 ~~a~~---~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~~~~~~~  224 (380)
                      +++++   ++|+||||||......      .++...+++|+.|+.++++++    ++.+.++||++||.......     
T Consensus        77 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----  151 (267)
T 3t4x_A           77 QDVIEKYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPS-----  151 (267)
T ss_dssp             HHHHHHCCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCC-----
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCC-----
Confidence            87764   7999999999653321      122334789999977776655    45666799999998764321     


Q ss_pred             hchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcccc-----ccccee--------e--ccCCcccCCC
Q 016901          225 LNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-----ETHNIT--------L--SQEDTLFGGQ  282 (380)
Q Consensus       225 ~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~-----~~~~~~--------~--~~~~~~~~~~  282 (380)
                       .....|+.+|.+.+.+.+.       .|++++.|+||.+.++.....     ......        .  .......+.+
T Consensus       152 -~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  230 (267)
T 3t4x_A          152 -QEMAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRL  230 (267)
T ss_dssp             -TTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSSCSC
T ss_pred             -CcchHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCcccccCc
Confidence             2345799999999988762       579999999999987632100     000000        0  0011123567


Q ss_pred             CCHHHHHHHHHHHHhCC-CCccCcEEEEecCCCCC
Q 016901          283 VSNLQVAELLACMAKNR-SLSYCKVVEVIAETTAP  316 (380)
Q Consensus       283 i~~~DvA~~i~~~l~~~-~~~~~~~~ni~~~~~~s  316 (380)
                      .+++|+|++++.++.+. ....|+++++.+|...+
T Consensus       231 ~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~~s  265 (267)
T 3t4x_A          231 IRPEEIAHLVTFLSSPLSSAINGSALRIDGGLVRS  265 (267)
T ss_dssp             BCTHHHHHHHHHHHSGGGTTCCSCEEEESTTCSCS
T ss_pred             cCHHHHHHHHHHHcCccccCccCCeEEECCCcccc
Confidence            89999999999999754 33579999999987654

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.91  E-value=4.4e-23  Score=195.25  Aligned_cols=220  Identities=14%  Similarity=0.102  Sum_probs=158.2

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC------------chhHHHHHHHHHhhhhcccccccCCCCCC
Q 016901           75 ADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS------------VQRAENLVQSVKQMKLDGELANKGIQPVE  142 (380)
Q Consensus        75 ~~~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (380)
                      |..+++|++|||||+|+||+++++.|+++|++|++++|+            .+...+..+.+...+             .
T Consensus        41 m~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~  107 (317)
T 3oec_A           41 MNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQG-------------R  107 (317)
T ss_dssp             -CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTT-------------C
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcC-------------C
Confidence            345678999999999999999999999999999999886            344444444333321             5


Q ss_pred             ceEEEEcCCCChhcHHHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHH----HcC-C
Q 016901          143 MLELVECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAK-V  204 (380)
Q Consensus       143 ~v~~~~~Dl~d~~~~~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~----~~~-v  204 (380)
                      ++.++.+|++|.++++++++       ++|+||||||......      .++...+++|+.|+.++++++.    +.+ .
T Consensus       108 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~  187 (317)
T 3oec_A          108 RIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQG  187 (317)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSC
T ss_pred             eEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCC
Confidence            78999999999988887763       7999999999654322      1233447899999999888874    333 4


Q ss_pred             CEEEEEccCCCCCCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccccc-------c-cc
Q 016901          205 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE-------T-HN  269 (380)
Q Consensus       205 ~r~V~~SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~-------~-~~  269 (380)
                      ++||++||.......      .....|+.+|.+.+.+.+       ..|+++++|+||+|.+|......       . ..
T Consensus       188 g~Iv~isS~~~~~~~------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~  261 (317)
T 3oec_A          188 GSVIFVSSTVGLRGA------PGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLEN  261 (317)
T ss_dssp             EEEEEECCGGGSSCC------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSS
T ss_pred             CEEEEECcHHhcCCC------CCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhccc
Confidence            689999997664321      234579999999997765       26899999999999987421100       0 00


Q ss_pred             e-------eeccCCcccCCCCCHHHHHHHHHHHHhCCC-CccCcEEEEecCC
Q 016901          270 I-------TLSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       270 ~-------~~~~~~~~~~~~i~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      .       .+.........+++++|+|++++.++.+.. ...|+++++.+|.
T Consensus       262 ~~~~~~~~~~~~~~~~p~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG~  313 (317)
T 3oec_A          262 PTREDAAELFSQLTLLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQ  313 (317)
T ss_dssp             CCHHHHHHHHTTTCSSSSSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             cchhHHHHHHhhhccCCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcch
Confidence            0       001111222467899999999999987543 3578999998875

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.91  E-value=5.6e-23  Score=189.48  Aligned_cols=204  Identities=15%  Similarity=0.142  Sum_probs=146.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++|++|||||+|+||++++++|+++|++|++++|+.++.+++.+.+...+             .++.++.+|++|.+++
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~-------------~~~~~~~~Dv~d~~~v   68 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAG-------------GTALAQVLDVTDRHSV   68 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT-------------CEEEEEECCTTCHHHH
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-------------CcEEEEEcCCCCHHHH
Confidence            467899999999999999999999999999999999988888777665432             5788999999999888


Q ss_pred             HHHh-------cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCCCC
Q 016901          158 EPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       158 ~~a~-------~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~~~  220 (380)
                      ++++       +++|+||||||......      .++...+++|+.|+.++++++.    +.+.++||++||....... 
T Consensus        69 ~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~-  147 (264)
T 3tfo_A           69 AAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVV-  147 (264)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCC-
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccC-
Confidence            7776       47999999999653322      1233457899999988877763    4566799999998664321 


Q ss_pred             chhhhchhhHHHHHHHHHHHHHHH-----CCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHHH
Q 016901          221 PAAILNLFWGVLLWKRKAEEALIA-----SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACM  295 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~-----~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~  295 (380)
                           .....|+.+|.+.+.+.+.     .|++++.|+||++.++.......... ..........+.+++|+|++++.+
T Consensus       148 -----~~~~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~~~~~pedvA~~v~~l  221 (264)
T 3tfo_A          148 -----PTAAVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAGTITHEET-MAAMDTYRAIALQPADIARAVRQV  221 (264)
T ss_dssp             -----TTCHHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC------------------------CCCHHHHHHHHHHH
T ss_pred             -----CCChhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCcccccccchhH-HHHHHhhhccCCCHHHHHHHHHHH
Confidence                 2345799999999877652     48999999999998774211100000 000001111247999999999999


Q ss_pred             HhCCCC
Q 016901          296 AKNRSL  301 (380)
Q Consensus       296 l~~~~~  301 (380)
                      +.++..
T Consensus       222 ~s~~~~  227 (264)
T 3tfo_A          222 IEAPQS  227 (264)
T ss_dssp             HHSCTT
T ss_pred             hcCCcc
Confidence            998764

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.91  E-value=2e-23  Score=193.30  Aligned_cols=213  Identities=13%  Similarity=0.075  Sum_probs=150.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      |++|||||+|+||++++++|+++|++|++++|+.++.+++.+.+...              .++.++.+|++|.++++++
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~--------------~~~~~~~~Dv~d~~~v~~~   87 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK--------------TRVLPLTLDVRDRAAMSAA   87 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT--------------SCEEEEECCTTCHHHHHHH
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC--------------CcEEEEEcCCCCHHHHHHH
Confidence            89999999999999999999999999999999988776665543210              4688999999999998888


Q ss_pred             hc-------CCCEEEEccccCcc-cc------CCCCCcchhhHHHHHHHHHHH----HHcCCC-EEEEEccCCCCCCCCc
Q 016901          161 LG-------NASVVICCIGASEK-EV------FDITGPYRIDFQATKNLVDAA----TIAKVN-HFIMVSSLGTNKFGFP  221 (380)
Q Consensus       161 ~~-------~~d~Vi~~Ag~~~~-~~------~~~~~~~~~nv~g~~~ll~a~----~~~~v~-r~V~~SS~~~~~~~~~  221 (380)
                      ++       ++|+||||||.... ..      .++...+++|+.|+.++++++    ++.+.+ +||++||......   
T Consensus        88 ~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~---  164 (272)
T 2nwq_A           88 VDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWP---  164 (272)
T ss_dssp             HHTCCGGGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSC---
T ss_pred             HHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccC---
Confidence            74       46999999996432 11      123344789999987776665    455667 9999999866432   


Q ss_pred             hhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHH
Q 016901          222 AAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLAC  294 (380)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~  294 (380)
                         ......|+.+|.+.+.+.+.       .|+++++|+||++.++.....................+++++|+|++++.
T Consensus       165 ---~~~~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~~  241 (272)
T 2nwq_A          165 ---YPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQARYDKTYAGAHPIQPEDIAETIFW  241 (272)
T ss_dssp             ---CTTCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC--------------------CCCCBCHHHHHHHHHH
T ss_pred             ---CCCCchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccccchHHHHHhhccCCCCCHHHHHHHHHH
Confidence               12345799999999988763       68999999999998874321000000000000001125799999999999


Q ss_pred             HHhCCCCccCcEEEEecCC
Q 016901          295 MAKNRSLSYCKVVEVIAET  313 (380)
Q Consensus       295 ~l~~~~~~~~~~~ni~~~~  313 (380)
                      ++.++....++.+.+.++.
T Consensus       242 l~s~~~~~~g~~i~v~~~~  260 (272)
T 2nwq_A          242 IMNQPAHLNINSLEIMPVS  260 (272)
T ss_dssp             HHTSCTTEEEEEEEEEETT
T ss_pred             HhCCCccCccceEEEeecc
Confidence            9987765567777776653

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.91  E-value=9.8e-23  Score=189.05  Aligned_cols=218  Identities=15%  Similarity=0.140  Sum_probs=157.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-------------CchhHHHHHHHHHhhhhcccccccCCCCCCc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVR-------------SVQRAENLVQSVKQMKLDGELANKGIQPVEM  143 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (380)
                      .+.+|++|||||+|+||++++++|+++|++|++++|             +.+..++..+.+...+             .+
T Consensus         8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~   74 (277)
T 3tsc_A            8 KLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAAN-------------RR   74 (277)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTT-------------CC
T ss_pred             ccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcC-------------Ce
Confidence            356789999999999999999999999999999998             4455555444443321             67


Q ss_pred             eEEEEcCCCChhcHHHHh-------cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHH----HcC-CC
Q 016901          144 LELVECDLEKRVQIEPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAK-VN  205 (380)
Q Consensus       144 v~~~~~Dl~d~~~~~~a~-------~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~----~~~-v~  205 (380)
                      +.++.+|++|.+++++++       +++|+||||||......      .++...+++|+.|+.++++++.    +.+ .+
T Consensus        75 ~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g  154 (277)
T 3tsc_A           75 IVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGG  154 (277)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCE
T ss_pred             EEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCC
Confidence            899999999998888776       46999999999754322      1233448899999999988753    333 46


Q ss_pred             EEEEEccCCCCCCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccc----------ccc
Q 016901          206 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK----------ETH  268 (380)
Q Consensus       206 r~V~~SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~----------~~~  268 (380)
                      +||++||.......      .....|+.+|.+.+.+.+       ..|++++.|+||++.+|.....          ...
T Consensus       155 ~iv~isS~~~~~~~------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~  228 (277)
T 3tsc_A          155 SIILISSAAGMKMQ------PFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNP  228 (277)
T ss_dssp             EEEEECCGGGTSCC------SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCG
T ss_pred             EEEEEccHhhCCCC------CCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccccH
Confidence            99999998664321      234579999999998775       2689999999999998743210          000


Q ss_pred             ceeeccCCcccCCCCCHHHHHHHHHHHHhCCC-CccCcEEEEecCC
Q 016901          269 NITLSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       269 ~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      .............+.+++|+|++++.++.+.. ...|+++++.+|.
T Consensus       229 ~~~~~~~~~~p~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~  274 (277)
T 3tsc_A          229 QLSHVLTPFLPDWVAEPEDIADTVCWLASDESRKVTAAQIPVDQGS  274 (277)
T ss_dssp             GGTTTTCCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHhhhccCCCCCCHHHHHHHHHHHhCccccCCcCCEEeeCCCc
Confidence            00000011111246899999999999997643 3568999988874

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.91  E-value=3.9e-24  Score=196.94  Aligned_cols=216  Identities=12%  Similarity=0.061  Sum_probs=155.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++|+++||||+|+||++++++|+++|++|++++|+.++.+.+.+.+...+             .++.++.+|++|.+++
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~D~~~~~~~   71 (262)
T 1zem_A            5 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKG-------------VEARSYVCDVTSEEAV   71 (262)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT-------------SCEEEEECCTTCHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------------CcEEEEEecCCCHHHH
Confidence            467899999999999999999999999999999999887776665554321             5688999999999887


Q ss_pred             HHHh-------cCCCEEEEccccC-cccc------CCCCCcchhhHHHHHHHHHHHHH----cCCCEEEEEccCCCCCCC
Q 016901          158 EPAL-------GNASVVICCIGAS-EKEV------FDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       158 ~~a~-------~~~d~Vi~~Ag~~-~~~~------~~~~~~~~~nv~g~~~ll~a~~~----~~v~r~V~~SS~~~~~~~  219 (380)
                      ++++       +++|+||||||.. ....      .++...+++|+.|+.++++++..    .+.++||++||.......
T Consensus        72 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  151 (262)
T 1zem_A           72 IGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGP  151 (262)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCC
T ss_pred             HHHHHHHHHHhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCC
Confidence            7666       3799999999964 2111      12334578999999998887653    456799999997543211


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccc-------------c-ccc-e-eeccCC
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-------------E-THN-I-TLSQED  276 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~-------------~-~~~-~-~~~~~~  276 (380)
                            .....|+.+|.+.+.+.+       ..|+++++|+||++.++.....             . ... . ......
T Consensus       152 ------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (262)
T 1zem_A          152 ------PNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGS  225 (262)
T ss_dssp             ------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHT
T ss_pred             ------CCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhc
Confidence                  233579999999887765       3689999999999987742110             0 000 0 000011


Q ss_pred             cccCCCCCHHHHHHHHHHHHhCCC-CccCcEEEEecC
Q 016901          277 TLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE  312 (380)
Q Consensus       277 ~~~~~~i~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~  312 (380)
                      ...+.+.+++|+|++++.++.+.. ...|+++.+.+|
T Consensus       226 ~p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG  262 (262)
T 1zem_A          226 VPMRRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG  262 (262)
T ss_dssp             STTSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             CCCCCCcCHHHHHHHHHHHcCchhcCcCCcEEecCCC
Confidence            122456799999999999997643 346788877654

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.91  E-value=1.1e-23  Score=196.37  Aligned_cols=216  Identities=13%  Similarity=0.122  Sum_probs=153.6

Q ss_pred             CCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh
Q 016901           78 KDDNLAFVAGAT--GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (380)
Q Consensus        78 ~~~~~vlVtGat--G~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~  155 (380)
                      +++++||||||+  |+||+++++.|+++|++|++++|+.+ ..+..+.+...             .+++.++.+|++|.+
T Consensus        19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~-------------~~~~~~~~~Dl~~~~   84 (285)
T 2p91_A           19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKG-------------FGSDLVVKCDVSLDE   84 (285)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHH-------------TTCCCEEECCTTCHH
T ss_pred             cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHh-------------cCCeEEEEcCCCCHH
Confidence            467899999999  99999999999999999999999875 22222222211             034778999999998


Q ss_pred             cHHHHhc-------CCCEEEEccccCcc----------ccCCCCCcchhhHHHHHHHHHHHHHcC---CCEEEEEccCCC
Q 016901          156 QIEPALG-------NASVVICCIGASEK----------EVFDITGPYRIDFQATKNLVDAATIAK---VNHFIMVSSLGT  215 (380)
Q Consensus       156 ~~~~a~~-------~~d~Vi~~Ag~~~~----------~~~~~~~~~~~nv~g~~~ll~a~~~~~---v~r~V~~SS~~~  215 (380)
                      +++++++       ++|+||||||....          ...++...+++|+.|+.++++++...-   .++||++||.+.
T Consensus        85 ~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~  164 (285)
T 2p91_A           85 DIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGA  164 (285)
T ss_dssp             HHHHHHHHHHHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGG
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchh
Confidence            8887763       79999999996532          111233457899999999999987543   269999999765


Q ss_pred             CCCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccc-cce-eeccCCcccCCCCCHH
Q 016901          216 NKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-HNI-TLSQEDTLFGGQVSNL  286 (380)
Q Consensus       216 ~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~-~~~-~~~~~~~~~~~~i~~~  286 (380)
                      ...      ......|+.+|.+.+.+.+       ..|+++++|+||++++|....... ... .........+.+.+++
T Consensus       165 ~~~------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  238 (285)
T 2p91_A          165 EKV------VPHYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPFGKPITIE  238 (285)
T ss_dssp             TSB------CTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTHHHHHHHHHHHSTTSSCCCHH
T ss_pred             ccC------CCCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccchHHHHHHHHhcCCCCCCcCHH
Confidence            321      1233569999999997765       268999999999999885321100 000 0000011223468999


Q ss_pred             HHHHHHHHHHhCCC-CccCcEEEEecCC
Q 016901          287 QVAELLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       287 DvA~~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      |+|++++.++.+.. ...|++|++.++.
T Consensus       239 dva~~~~~l~s~~~~~~tG~~~~vdgg~  266 (285)
T 2p91_A          239 DVGDTAVFLCSDWARAITGEVVHVDNGY  266 (285)
T ss_dssp             HHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHHcCCcccCCCCCEEEECCCc
Confidence            99999999987533 3468899988874

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.91  E-value=3.7e-23  Score=194.36  Aligned_cols=205  Identities=17%  Similarity=0.051  Sum_probs=151.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .+.+++||||||+|+||++++++|+++|++|++++|+.++.+++.+.+...+             .++.++.+|++|.++
T Consensus        28 ~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-------------~~~~~~~~Dv~d~~~   94 (301)
T 3tjr_A           28 GFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQG-------------FDAHGVVCDVRHLDE   94 (301)
T ss_dssp             CSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------------CCEEEEECCTTCHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-------------CceEEEEccCCCHHH
Confidence            3567899999999999999999999999999999999988887777665432             578999999999988


Q ss_pred             HHHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHH----HcC-CCEEEEEccCCCCCC
Q 016901          157 IEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAK-VNHFIMVSSLGTNKF  218 (380)
Q Consensus       157 ~~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~----~~~-v~r~V~~SS~~~~~~  218 (380)
                      ++++++       ++|+||||||......      .++...+++|+.|+.++++++.    +.+ .++||++||......
T Consensus        95 v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~  174 (301)
T 3tjr_A           95 MVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVP  174 (301)
T ss_dssp             HHHHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSC
T ss_pred             HHHHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCC
Confidence            887764       7999999999653221      1233458899999999998864    344 569999999776432


Q ss_pred             CCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccccc-ccc--e-----ee--ccCCcccCC
Q 016901          219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE-THN--I-----TL--SQEDTLFGG  281 (380)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~-~~~--~-----~~--~~~~~~~~~  281 (380)
                            ......|+.+|.+.+.+.+       ..|+++++|+||++.++...... ...  .     ..  .........
T Consensus       175 ------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (301)
T 3tjr_A          175 ------NAGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDE  248 (301)
T ss_dssp             ------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC----------------------
T ss_pred             ------CCCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccccccccccchhhccccChhhhccccccccC
Confidence                  1234579999999987765       26899999999999887422100 000  0     00  001111224


Q ss_pred             CCCHHHHHHHHHHHHhCCC
Q 016901          282 QVSNLQVAELLACMAKNRS  300 (380)
Q Consensus       282 ~i~~~DvA~~i~~~l~~~~  300 (380)
                      +++++|+|++++.+++.+.
T Consensus       249 ~~~pedvA~~i~~~l~~~~  267 (301)
T 3tjr_A          249 SVSADDVARLTADAILANR  267 (301)
T ss_dssp             CCCHHHHHHHHHHHHHHTC
T ss_pred             CCCHHHHHHHHHHHHhcCC
Confidence            7899999999999998765

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.91  E-value=7.1e-24  Score=197.08  Aligned_cols=217  Identities=14%  Similarity=0.134  Sum_probs=160.1

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .+.++++|||||+|+||++++++|+++|++|++++|+.++.+++.+.+.                .++.++.+|++|.++
T Consensus        27 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~----------------~~~~~~~~Dl~~~~~   90 (281)
T 3ppi_A           27 QFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELG----------------NRAEFVSTNVTSEDS   90 (281)
T ss_dssp             GGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC----------------TTEEEEECCTTCHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC----------------CceEEEEcCCCCHHH
Confidence            3467899999999999999999999999999999999888776655431                579999999999998


Q ss_pred             HHHHhc------CCCEEEEcc-ccCccccC-----------CCCCcchhhHHHHHHHHHHHHH----------cCCCEEE
Q 016901          157 IEPALG------NASVVICCI-GASEKEVF-----------DITGPYRIDFQATKNLVDAATI----------AKVNHFI  208 (380)
Q Consensus       157 ~~~a~~------~~d~Vi~~A-g~~~~~~~-----------~~~~~~~~nv~g~~~ll~a~~~----------~~v~r~V  208 (380)
                      ++++++      ++|+||||+ |.......           ++...+++|+.++.++++++..          .+.++||
T Consensus        91 v~~~~~~~~~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv  170 (281)
T 3ppi_A           91 VLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALV  170 (281)
T ss_dssp             HHHHHHHHTTSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEE
T ss_pred             HHHHHHHHHHhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEE
Confidence            888774      689999994 43221110           1234478999999999988752          2345999


Q ss_pred             EEccCCCCCCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccc-eeeccCCcccC
Q 016901          209 MVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHN-ITLSQEDTLFG  280 (380)
Q Consensus       209 ~~SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~-~~~~~~~~~~~  280 (380)
                      ++||.......      .....|+.+|.+.+.+.+       ..|+++++|+||++.++......... ..+.......+
T Consensus       171 ~isS~~~~~~~------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  244 (281)
T 3ppi_A          171 LTASIAGYEGQ------IGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVGEEALAKFAANIPFPK  244 (281)
T ss_dssp             EECCGGGTSCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTTCHHHHHHHHHTCCSSS
T ss_pred             EEecccccCCC------CCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcccHHHHHHHHhcCCCCC
Confidence            99998764321      234579999999987765       26899999999999876321110000 01111112224


Q ss_pred             CCCCHHHHHHHHHHHHhCCCCccCcEEEEecCCCCC
Q 016901          281 GQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAP  316 (380)
Q Consensus       281 ~~i~~~DvA~~i~~~l~~~~~~~~~~~ni~~~~~~s  316 (380)
                      .+++++|+|++++.++.+.. ..|+++++.+|...+
T Consensus       245 ~~~~pedvA~~v~~l~s~~~-~tG~~i~vdGG~~~~  279 (281)
T 3ppi_A          245 RLGTPDEFADAAAFLLTNGY-INGEVMRLDGAQRFT  279 (281)
T ss_dssp             SCBCHHHHHHHHHHHHHCSS-CCSCEEEESTTCCCC
T ss_pred             CCCCHHHHHHHHHHHHcCCC-cCCcEEEECCCcccC
Confidence            67899999999999998744 679999999987654

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.91  E-value=1.8e-23  Score=192.95  Aligned_cols=216  Identities=14%  Similarity=0.102  Sum_probs=157.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEe-CCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGV-RSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~-R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      +++++||||||+|+||++++++|+++|++|+++. |+.+..++..+.+...+             .++.++.+|++|.++
T Consensus        24 l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~-------------~~~~~~~~Dl~~~~~   90 (267)
T 4iiu_A           24 AMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANG-------------GNGRLLSFDVANREQ   90 (267)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-------------CCEEEEECCTTCHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC-------------CceEEEEecCCCHHH
Confidence            4678999999999999999999999999997765 66666666555554321             678999999999988


Q ss_pred             HHHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHH-----HcCCCEEEEEccCCCCCC
Q 016901          157 IEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT-----IAKVNHFIMVSSLGTNKF  218 (380)
Q Consensus       157 ~~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~-----~~~v~r~V~~SS~~~~~~  218 (380)
                      ++++++       .+|+||||||......      .++...+++|+.|+.++++++.     +.+.++||++||......
T Consensus        91 ~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~  170 (267)
T 4iiu_A           91 CREVLEHEIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMG  170 (267)
T ss_dssp             HHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHC
T ss_pred             HHHHHHHHHHHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccC
Confidence            887764       7999999999654322      1233447899999999998873     455679999999654221


Q ss_pred             CCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHH
Q 016901          219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAEL  291 (380)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~  291 (380)
                            ......|+.+|.+.+.+.+       ..|+++++|+||++.++........ ..........+.+.+++|+|++
T Consensus       171 ------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-~~~~~~~~p~~~~~~~edva~~  243 (267)
T 4iiu_A          171 ------NRGQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEMEESA-LKEAMSMIPMKRMGQAEEVAGL  243 (267)
T ss_dssp             ------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCCHHH-HHHHHHTCTTCSCBCHHHHHHH
T ss_pred             ------CCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCcccccHHH-HHHHHhcCCCCCCcCHHHHHHH
Confidence                  1234579999998887664       2689999999999998753211100 0000111223457899999999


Q ss_pred             HHHHHhCC-CCccCcEEEEecCC
Q 016901          292 LACMAKNR-SLSYCKVVEVIAET  313 (380)
Q Consensus       292 i~~~l~~~-~~~~~~~~ni~~~~  313 (380)
                      +..++.+. ....|+++++.+|.
T Consensus       244 ~~~L~s~~~~~itG~~i~vdGG~  266 (267)
T 4iiu_A          244 ASYLMSDIAGYVTRQVISINGGM  266 (267)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHhCCcccCccCCEEEeCCCc
Confidence            99999764 33578999988763

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.91  E-value=9.5e-24  Score=194.89  Aligned_cols=209  Identities=18%  Similarity=0.138  Sum_probs=153.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .+++|+||||||+|+||++++++|+++|++|++++|+.+..                        .....+.+|++|.++
T Consensus        25 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~------------------------~~~~~~~~Dv~~~~~   80 (266)
T 3uxy_A           25 GFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGI------------------------AADLHLPGDLREAAY   80 (266)
T ss_dssp             -CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTS------------------------CCSEECCCCTTSHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH------------------------HhhhccCcCCCCHHH
Confidence            45778999999999999999999999999999999986542                        122445899999887


Q ss_pred             HHHHh-------cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCCC
Q 016901          157 IEPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       157 ~~~a~-------~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~~  219 (380)
                      +.+++       +++|+||||||......      .++...+++|+.|+.++++++    ++.+.++||++||...... 
T Consensus        81 ~~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~-  159 (266)
T 3uxy_A           81 ADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRP-  159 (266)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBC-
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCC-
Confidence            76655       47999999999754321      123344789999999999887    5566789999999866432 


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccccc-ccce------eeccCCcccCCCCCH
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE-THNI------TLSQEDTLFGGQVSN  285 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~-~~~~------~~~~~~~~~~~~i~~  285 (380)
                           ......|+.+|.+.+.+.+       ..|+++++|+||++++|...... ....      .........+.+.++
T Consensus       160 -----~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p  234 (266)
T 3uxy_A          160 -----GPGHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEP  234 (266)
T ss_dssp             -----CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCH
T ss_pred             -----CCCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcCCCCCCcCH
Confidence                 1234579999999998765       26899999999999987421100 0000      001112223457899


Q ss_pred             HHHHHHHHHHHhCCC-CccCcEEEEecCCCC
Q 016901          286 LQVAELLACMAKNRS-LSYCKVVEVIAETTA  315 (380)
Q Consensus       286 ~DvA~~i~~~l~~~~-~~~~~~~ni~~~~~~  315 (380)
                      +|+|++++.++.+.. ...|++|++.+|...
T Consensus       235 edvA~~v~~L~s~~~~~itG~~i~vdGG~~~  265 (266)
T 3uxy_A          235 EDIADVVLFLASDAARYLCGSLVEVNGGKAV  265 (266)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             HHHHHHHHHHhCchhcCCcCCEEEECcCEeC
Confidence            999999999998653 356899999988654

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.91  E-value=9.7e-24  Score=186.25  Aligned_cols=181  Identities=14%  Similarity=0.064  Sum_probs=139.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      +|+|+||||+|+||++++++|+ +|++|++++|+..                              ++.+|++|.+++++
T Consensus         3 kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~------------------------------~~~~D~~~~~~~~~   51 (202)
T 3d7l_A            3 AMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG------------------------------DVTVDITNIDSIKK   51 (202)
T ss_dssp             SCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS------------------------------SEECCTTCHHHHHH
T ss_pred             CcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc------------------------------ceeeecCCHHHHHH
Confidence            3589999999999999999999 9999999999752                              35799999999988


Q ss_pred             HhcC---CCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHHHHc---CCCEEEEEccCCCCCCCCchhhhch
Q 016901          160 ALGN---ASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAATIA---KVNHFIMVSSLGTNKFGFPAAILNL  227 (380)
Q Consensus       160 a~~~---~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~~~~---~v~r~V~~SS~~~~~~~~~~~~~~~  227 (380)
                      ++++   +|+||||||.......      ++...+++|+.++.++++++.+.   + ++||++||......      ...
T Consensus        52 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~------~~~  124 (202)
T 3d7l_A           52 MYEQVGKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDK-GSFTLTTGIMMEDP------IVQ  124 (202)
T ss_dssp             HHHHHCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEE-EEEEEECCGGGTSC------CTT
T ss_pred             HHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccC-CEEEEEcchhhcCC------CCc
Confidence            8764   8999999996532211      12234678999999999999865   4 69999999765332      123


Q ss_pred             hhHHHHHHHHHHHHHHH------CCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHHHHhCCCC
Q 016901          228 FWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSL  301 (380)
Q Consensus       228 ~~~Y~~sK~~~E~~l~~------~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~~~  301 (380)
                      ...|+.+|.+.|.+++.      .|+++++||||+++++......         ......+++++|+|++++.++.+.  
T Consensus       125 ~~~Y~~sK~~~~~~~~~~~~e~~~gi~v~~v~pg~v~~~~~~~~~---------~~~~~~~~~~~dva~~~~~~~~~~--  193 (202)
T 3d7l_A          125 GASAAMANGAVTAFAKSAAIEMPRGIRINTVSPNVLEESWDKLEP---------FFEGFLPVPAAKVARAFEKSVFGA--  193 (202)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTSCSTTCEEEEEEECCBGGGHHHHGG---------GSTTCCCBCHHHHHHHHHHHHHSC--
T ss_pred             cHHHHHHHHHHHHHHHHHHHHccCCeEEEEEecCccCCchhhhhh---------hccccCCCCHHHHHHHHHHhhhcc--
Confidence            45799999999988874      4899999999999988532110         111235799999999999888542  


Q ss_pred             ccCcEEEE
Q 016901          302 SYCKVVEV  309 (380)
Q Consensus       302 ~~~~~~ni  309 (380)
                      ..|++||+
T Consensus       194 ~~G~~~~v  201 (202)
T 3d7l_A          194 QTGESYQV  201 (202)
T ss_dssp             CCSCEEEE
T ss_pred             ccCceEec
Confidence            44778876

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.91  E-value=4.9e-23  Score=188.21  Aligned_cols=207  Identities=14%  Similarity=0.120  Sum_probs=147.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ...+|+||||||+|+||++++++|+++|++|++++|+.+..+++                     .++.++ +|+  .++
T Consensus        16 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~---------------------~~~~~~-~D~--~~~   71 (249)
T 1o5i_A           16 GIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS---------------------GHRYVV-CDL--RKD   71 (249)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT---------------------CSEEEE-CCT--TTC
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHhh---------------------CCeEEE-eeH--HHH
Confidence            45789999999999999999999999999999999987432211                     346677 999  344


Q ss_pred             HHHHh---cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHH----HHHHHcCCCEEEEEccCCCCCCCCchh
Q 016901          157 IEPAL---GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLV----DAATIAKVNHFIMVSSLGTNKFGFPAA  223 (380)
Q Consensus       157 ~~~a~---~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll----~a~~~~~v~r~V~~SS~~~~~~~~~~~  223 (380)
                      +++++   .++|+||||||......      .++...+++|+.|+.+++    +.+++.+.++||++||..+....    
T Consensus        72 ~~~~~~~~~~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----  147 (249)
T 1o5i_A           72 LDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPI----  147 (249)
T ss_dssp             HHHHHHHSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----
T ss_pred             HHHHHHHhcCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCC----
Confidence            55444   48999999999653221      123344788999977655    44556677899999998764321    


Q ss_pred             hhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccce--eeccCCcccCCCCCHHHHHHHHHH
Q 016901          224 ILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNI--TLSQEDTLFGGQVSNLQVAELLAC  294 (380)
Q Consensus       224 ~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~--~~~~~~~~~~~~i~~~DvA~~i~~  294 (380)
                        .....|+.+|.+.+.+.+       ..|+++++|+||++++|..........  .+. .....+.+++++|+|++++.
T Consensus       148 --~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~-~~~p~~~~~~~~dvA~~i~~  224 (249)
T 1o5i_A          148 --ENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVE-SQIPMRRMAKPEEIASVVAF  224 (249)
T ss_dssp             --TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHHHHHH-TTSTTSSCBCHHHHHHHHHH
T ss_pred             --CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccchhhHHHHHH-hcCCCCCCcCHHHHHHHHHH
Confidence              234579999999987765       268999999999999985321100000  011 11123457899999999999


Q ss_pred             HHhCCC-CccCcEEEEecCCC
Q 016901          295 MAKNRS-LSYCKVVEVIAETT  314 (380)
Q Consensus       295 ~l~~~~-~~~~~~~ni~~~~~  314 (380)
                      ++.+.. ...|++|++.++..
T Consensus       225 l~s~~~~~~tG~~~~vdgG~~  245 (249)
T 1o5i_A          225 LCSEKASYLTGQTIVVDGGLS  245 (249)
T ss_dssp             HHSGGGTTCCSCEEEESTTCC
T ss_pred             HcCccccCCCCCEEEECCCcc
Confidence            987643 34688999988753

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.91  E-value=2.6e-22  Score=181.45  Aligned_cols=206  Identities=17%  Similarity=0.151  Sum_probs=152.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      +|++|||||+|+||++++++|+++|++|++++|+.++.+...+.+....            ..++.++.+|++|.+++.+
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------------~~~~~~~~~D~~~~~~v~~   69 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQ------------GVEVFYHHLDVSKAESVEE   69 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH------------CCCEEEEECCTTCHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc------------CCeEEEEEeccCCHHHHHH
Confidence            5789999999999999999999999999999999988877766554211            1578999999999998888


Q ss_pred             Hhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHHH---cCCCEEEEEccCCCCCCCCchh
Q 016901          160 ALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATI---AKVNHFIMVSSLGTNKFGFPAA  223 (380)
Q Consensus       160 a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~~---~~v~r~V~~SS~~~~~~~~~~~  223 (380)
                      +++       ++|+||||||......      .++...+++|+.|+.++++++..   .+.+++|++||.......    
T Consensus        70 ~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~----  145 (235)
T 3l77_A           70 FSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLI----  145 (235)
T ss_dssp             HCC-HHHHHSSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSCC----
T ss_pred             HHHHHHHhcCCCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcccC----
Confidence            774       7999999999653322      12334478999999999988753   233577778776543221    


Q ss_pred             hhchhhHHHHHHHHHHHHHHH-----CCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHHHHhC
Q 016901          224 ILNLFWGVLLWKRKAEEALIA-----SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKN  298 (380)
Q Consensus       224 ~~~~~~~Y~~sK~~~E~~l~~-----~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~  298 (380)
                        .....|+.+|++.+.+.+.     .|+++++|+||++.++.......        ......+++++|+|++++.++.+
T Consensus       146 --~~~~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~~~~--------~~~~~~~~~p~dva~~v~~l~~~  215 (235)
T 3l77_A          146 --PYGGGYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGGSKPG--------KPKEKGYLKPDEIAEAVRCLLKL  215 (235)
T ss_dssp             --TTCHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTCCSC--------CCGGGTCBCHHHHHHHHHHHHTS
T ss_pred             --CCcchHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCccccccccccCC--------cccccCCCCHHHHHHHHHHHHcC
Confidence              2235799999999988763     69999999999998764321100        11112578999999999999998


Q ss_pred             CCCc-cCcEEEEec
Q 016901          299 RSLS-YCKVVEVIA  311 (380)
Q Consensus       299 ~~~~-~~~~~ni~~  311 (380)
                      +... .++++-..+
T Consensus       216 ~~~~~~~~~~~~~~  229 (235)
T 3l77_A          216 PKDVRVEELMLRSV  229 (235)
T ss_dssp             CTTCCCCEEEECCT
T ss_pred             CCCCccceEEEeec
Confidence            7632 344443333

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.91  E-value=1.1e-23  Score=191.61  Aligned_cols=202  Identities=12%  Similarity=0.021  Sum_probs=143.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G--~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ++++|+||||+|+||++++++|+++|  ++|++++|+.++.+.+.+    +            ...++.++.+|++|.++
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~----~------------~~~~~~~~~~D~~~~~~   65 (250)
T 1yo6_A            2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS----I------------KDSRVHVLPLTVTCDKS   65 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT----C------------CCTTEEEEECCTTCHHH
T ss_pred             CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHh----c------------cCCceEEEEeecCCHHH
Confidence            46799999999999999999999999  999999999887655432    0            12578999999999988


Q ss_pred             HHHHhc---------CCCEEEEccccCc-ccc------CCCCCcchhhHHHHHHHHHHHHHc----------C-----CC
Q 016901          157 IEPALG---------NASVVICCIGASE-KEV------FDITGPYRIDFQATKNLVDAATIA----------K-----VN  205 (380)
Q Consensus       157 ~~~a~~---------~~d~Vi~~Ag~~~-~~~------~~~~~~~~~nv~g~~~ll~a~~~~----------~-----v~  205 (380)
                      ++++++         ++|+||||||... ...      .++...+++|+.++.++++++...          +     .+
T Consensus        66 ~~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  145 (250)
T 1yo6_A           66 LDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRA  145 (250)
T ss_dssp             HHHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTC
T ss_pred             HHHHHHHHHHhcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCc
Confidence            888775         8999999999654 211      122334789999999988876532          4     67


Q ss_pred             EEEEEccCCCCCCCCc-hhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcccccccceeeccCCc
Q 016901          206 HFIMVSSLGTNKFGFP-AAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDT  277 (380)
Q Consensus       206 r~V~~SS~~~~~~~~~-~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~  277 (380)
                      +||++||......... .....+...|+.+|.+.+.+++.       .|+++++|+||++.++....             
T Consensus       146 ~iv~isS~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-------------  212 (250)
T 1yo6_A          146 AVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK-------------  212 (250)
T ss_dssp             EEEEECCGGGCSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC--------------------
T ss_pred             EEEEeccCccccCCcccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC-------------
Confidence            9999999765332111 11113456799999999988752       48999999999998774210             


Q ss_pred             ccCCCCCHHHHHHHHHHHHhCCCC-ccCcEEEEec
Q 016901          278 LFGGQVSNLQVAELLACMAKNRSL-SYCKVVEVIA  311 (380)
Q Consensus       278 ~~~~~i~~~DvA~~i~~~l~~~~~-~~~~~~ni~~  311 (380)
                        ..+++++|+|+.++.++..... ..+..+.+.+
T Consensus       213 --~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g  245 (250)
T 1yo6_A          213 --NAALTVEQSTAELISSFNKLDNSHNGRFFMRNL  245 (250)
T ss_dssp             --------HHHHHHHHHHHTTCCGGGTTCEEETTE
T ss_pred             --CCCCCHHHHHHHHHHHHhcccccCCCeEEEECC
Confidence              1468999999999999987652 3456665443

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.91  E-value=8.3e-23  Score=188.37  Aligned_cols=221  Identities=17%  Similarity=0.164  Sum_probs=162.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .++++++|||||+|+||++++++|+++|++|++++|+.++.++..+.+....           ...++.++.+|++|.++
T Consensus         5 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-----------~~~~~~~~~~Dv~~~~~   73 (265)
T 3lf2_A            5 DLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRF-----------PGARLFASVCDVLDALQ   73 (265)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHS-----------TTCCEEEEECCTTCHHH
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-----------CCceEEEEeCCCCCHHH
Confidence            3467899999999999999999999999999999999988877776665311           01358999999999988


Q ss_pred             HHHHh-------cCCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHHHH----cCCCEEEEEccCCCCCCC
Q 016901          157 IEPAL-------GNASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       157 ~~~a~-------~~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~~~----~~v~r~V~~SS~~~~~~~  219 (380)
                      +++++       +++|+||||||.......      ++...+++|+.|+.++++++..    .+.++||++||.......
T Consensus        74 v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  153 (265)
T 3lf2_A           74 VRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPE  153 (265)
T ss_dssp             HHHHHHHHHHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCC
Confidence            77765       478999999996533221      2334478999999999988743    445689999997664321


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccc-c-----c---e--eec-cCCcccC
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-H-----N---I--TLS-QEDTLFG  280 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~-~-----~---~--~~~-~~~~~~~  280 (380)
                            .....|+.+|.+.+.+.+       ..|++++.|+||++.+|....... .     .   .  ... ......+
T Consensus       154 ------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~  227 (265)
T 3lf2_A          154 ------PHMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLG  227 (265)
T ss_dssp             ------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCTTC
T ss_pred             ------CCchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCcC
Confidence                  234579999999998765       268999999999998863211000 0     0   0  000 0012334


Q ss_pred             CCCCHHHHHHHHHHHHhCC-CCccCcEEEEecCCC
Q 016901          281 GQVSNLQVAELLACMAKNR-SLSYCKVVEVIAETT  314 (380)
Q Consensus       281 ~~i~~~DvA~~i~~~l~~~-~~~~~~~~ni~~~~~  314 (380)
                      .+.+++|+|++++.++.+. ....|+++++.+|..
T Consensus       228 r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~  262 (265)
T 3lf2_A          228 RLGKPIEAARAILFLASPLSAYTTGSHIDVSGGLS  262 (265)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSEEEEESSSCC
T ss_pred             CCcCHHHHHHHHHHHhCchhcCcCCCEEEECCCCc
Confidence            5789999999999999754 345789999988764

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.91  E-value=5.3e-24  Score=195.16  Aligned_cols=211  Identities=15%  Similarity=0.123  Sum_probs=153.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G--~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +|++|||||+|+||++++++|+++|  +.|+++.|+.++.+++.+.+.                .++.++.+|++|.+++
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~----------------~~~~~~~~Dv~~~~~v   65 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYG----------------DRFFYVVGDITEDSVL   65 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHG----------------GGEEEEESCTTSHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhC----------------CceEEEECCCCCHHHH
Confidence            5799999999999999999999985  789999999887766654331                5789999999999888


Q ss_pred             HHHhc-------CCCEEEEccccCcc-cc------CCCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCCC
Q 016901          158 EPALG-------NASVVICCIGASEK-EV------FDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~~-~~------~~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~~  219 (380)
                      +++++       ++|+||||||.... ..      .++...+++|+.|+.++++++    ++.+ ++||++||...... 
T Consensus        66 ~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~~-  143 (254)
T 3kzv_A           66 KQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMY-  143 (254)
T ss_dssp             HHHHHHHHHHHSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCCS-
T ss_pred             HHHHHHHHHhcCCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhccC-
Confidence            87763       79999999996422 11      123345789999999998887    4555 79999999876432 


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHHH-----CCCCEEEEecCcccCCCcccccccc---------eeeccCCcccCCCCCH
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALIA-----SGLPYTIVRPGGMERPTDAYKETHN---------ITLSQEDTLFGGQVSN  285 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-----~g~~~~ivRpg~v~gp~~~~~~~~~---------~~~~~~~~~~~~~i~~  285 (380)
                           ......|+.+|.+.+.+.+.     .|++++.|+||++.++.........         ..........+.+.++
T Consensus       144 -----~~~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p  218 (254)
T 3kzv_A          144 -----FSSWGAYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDS  218 (254)
T ss_dssp             -----SCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHTTC----C
T ss_pred             -----CCCcchHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHhcCCcCCc
Confidence                 12345799999999988763     5899999999999987432110000         0000011122356899


Q ss_pred             HHHHHHHHHHHhCC--CCccCcEEEEecCC
Q 016901          286 LQVAELLACMAKNR--SLSYCKVVEVIAET  313 (380)
Q Consensus       286 ~DvA~~i~~~l~~~--~~~~~~~~ni~~~~  313 (380)
                      +|+|++++.++.+.  ....|+++++.+++
T Consensus       219 ~dva~~v~~L~s~~~~~~itG~~i~vdg~~  248 (254)
T 3kzv_A          219 SVPATVYAKLALHGIPDGVNGQYLSYNDPA  248 (254)
T ss_dssp             HHHHHHHHHHHHHCCCGGGTTCEEETTCGG
T ss_pred             ccHHHHHHHHHhhcccCCCCccEEEecCcc
Confidence            99999999999865  44578899887765

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.91  E-value=9.1e-23  Score=186.70  Aligned_cols=215  Identities=13%  Similarity=0.073  Sum_probs=158.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCC--CCh
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDL--EKR  154 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl--~d~  154 (380)
                      .+++|++|||||+|+||++++++|+++|++|++++|+.++.++..+.+...+            ..++.++.+|+  +|.
T Consensus         9 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------------~~~~~~~~~D~~~~~~   76 (252)
T 3f1l_A            9 LLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEET------------GRQPQWFILDLLTCTS   76 (252)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH------------SCCCEEEECCTTTCCH
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc------------CCCceEEEEecccCCH
Confidence            3578999999999999999999999999999999999988877776665432            13688999999  888


Q ss_pred             hcHHHHh-------cCCCEEEEccccCcc-ccC------CCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCC
Q 016901          155 VQIEPAL-------GNASVVICCIGASEK-EVF------DITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTN  216 (380)
Q Consensus       155 ~~~~~a~-------~~~d~Vi~~Ag~~~~-~~~------~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~  216 (380)
                      +++++++       +++|+||||||.... ...      ++...+++|+.|+.++++++    ++.+.++||++||....
T Consensus        77 ~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~  156 (252)
T 3f1l_A           77 ENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGR  156 (252)
T ss_dssp             HHHHHHHHHHHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGT
T ss_pred             HHHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhc
Confidence            8777666       379999999996421 111      22344789999999999887    45567799999997653


Q ss_pred             CCCCchhhhchhhHHHHHHHHHHHHHHH------CCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHH
Q 016901          217 KFGFPAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAE  290 (380)
Q Consensus       217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~~------~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~  290 (380)
                      ...      .....|+.+|.+.+.+.+.      ..++++.|+||++.++.....      ...  .....+.+++|+|.
T Consensus       157 ~~~------~~~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~~~~~~------~~~--~~~~~~~~p~dva~  222 (252)
T 3f1l_A          157 QGR------ANWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAMRASA------FPT--EDPQKLKTPADIMP  222 (252)
T ss_dssp             SCC------TTCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSHHHHHH------CTT--CCGGGSBCTGGGHH
T ss_pred             cCC------CCCchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCchhhhh------CCc--cchhccCCHHHHHH
Confidence            321      2345799999999987752      239999999999987632110      000  11124578999999


Q ss_pred             HHHHHHhCCC-CccCcEEEEecCCCCCc
Q 016901          291 LLACMAKNRS-LSYCKVVEVIAETTAPL  317 (380)
Q Consensus       291 ~i~~~l~~~~-~~~~~~~ni~~~~~~s~  317 (380)
                      +++.++.+.. ...|+++++.+|...++
T Consensus       223 ~~~~L~s~~~~~itG~~i~vdgG~~~~~  250 (252)
T 3f1l_A          223 LYLWLMGDDSRRKTGMTFDAQPGRKPGI  250 (252)
T ss_dssp             HHHHHHSGGGTTCCSCEEESSCC-----
T ss_pred             HHHHHcCccccCCCCCEEEeCCCcCCCC
Confidence            9999997653 35789999999886654

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.91  E-value=4.4e-24  Score=197.00  Aligned_cols=227  Identities=15%  Similarity=0.131  Sum_probs=159.9

Q ss_pred             CCCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCCh
Q 016901           77 SKDDNLAFVAGAT--GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (380)
Q Consensus        77 ~~~~~~vlVtGat--G~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~  154 (380)
                      ...+|+||||||+  |+||++++++|+++|++|++++|+....+.+.+.....              +++.++.+|++|.
T Consensus        11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--------------~~~~~~~~Dv~~~   76 (271)
T 3ek2_A           11 FLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEF--------------GSELVFPCDVADD   76 (271)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHT--------------TCCCEEECCTTCH
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHc--------------CCcEEEECCCCCH
Confidence            4578999999999  99999999999999999999999865444433322221              4588999999999


Q ss_pred             hcHHHHhc-------CCCEEEEccccCccc-----------cCCCCCcchhhHHHHHHHHHHHHHcC--CCEEEEEccCC
Q 016901          155 VQIEPALG-------NASVVICCIGASEKE-----------VFDITGPYRIDFQATKNLVDAATIAK--VNHFIMVSSLG  214 (380)
Q Consensus       155 ~~~~~a~~-------~~d~Vi~~Ag~~~~~-----------~~~~~~~~~~nv~g~~~ll~a~~~~~--v~r~V~~SS~~  214 (380)
                      ++++++++       ++|+||||||.....           ..++...+++|+.++.++++++...-  .++||++||.+
T Consensus        77 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~  156 (271)
T 3ek2_A           77 AQIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLG  156 (271)
T ss_dssp             HHHHHHHHHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGG
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccc
Confidence            88887774       689999999965321           11223347899999999999987542  34899999976


Q ss_pred             CCCCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccc--cceeeccCCcccCCCCCH
Q 016901          215 TNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET--HNITLSQEDTLFGGQVSN  285 (380)
Q Consensus       215 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~--~~~~~~~~~~~~~~~i~~  285 (380)
                      ....      ......|+.+|.+.+.+.+       ..|+++++|+||++.++.......  ............+.+.++
T Consensus       157 ~~~~------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p  230 (271)
T 3ek2_A          157 AERA------IPNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPLKRNVTI  230 (271)
T ss_dssp             GTSB------CTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHHHHHHHHHHHSTTSSCCCH
T ss_pred             cccC------CCCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchHHHHHHHHhcCCcCCCCCH
Confidence            6432      1234579999999997765       368999999999998874321100  000000111223457899


Q ss_pred             HHHHHHHHHHHhCC-CCccCcEEEEecCCCCCcchHHHH
Q 016901          286 LQVAELLACMAKNR-SLSYCKVVEVIAETTAPLTPMEEL  323 (380)
Q Consensus       286 ~DvA~~i~~~l~~~-~~~~~~~~ni~~~~~~s~~~~~e~  323 (380)
                      +|+|++++.++.+. ....|++|++.+|...++.++.++
T Consensus       231 edva~~i~~l~s~~~~~~tG~~i~vdgG~~~~~~~~~~~  269 (271)
T 3ek2_A          231 EQVGNAGAFLLSDLASGVTAEVMHVDSGFNAVVGGMAGL  269 (271)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSEEEEESTTGGGBCCCC---
T ss_pred             HHHHHHHHHHcCcccCCeeeeEEEECCCeeeehhhhhhc
Confidence            99999999999764 335799999999987776666543

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.91  E-value=1.2e-23  Score=195.13  Aligned_cols=216  Identities=11%  Similarity=0.094  Sum_probs=161.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++|+++||||+|+||++++++|+++|++|++++|+.++..+..+.+...+             .++.++.+|++|.+++
T Consensus        31 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~Dv~~~~~~   97 (275)
T 4imr_A           31 LRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASG-------------GTAQELAGDLSEAGAG   97 (275)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTT-------------CCEEEEECCTTSTTHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC-------------CeEEEEEecCCCHHHH
Confidence            467899999999999999999999999999999999988877776665432             6789999999999888


Q ss_pred             HHHhc------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCCCCc
Q 016901          158 EPALG------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGFP  221 (380)
Q Consensus       158 ~~a~~------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~~~~  221 (380)
                      +++++      ++|+||||||......      .++...+++|+.|+.++++++    ++.+.++||++||......   
T Consensus        98 ~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~---  174 (275)
T 4imr_A           98 TDLIERAEAIAPVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRP---  174 (275)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC---
T ss_pred             HHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCC---
Confidence            87764      7999999999653221      123344789999999998887    4456679999999876431   


Q ss_pred             hhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccc---cce-eeccCCcccCCCCCHHHHHH
Q 016901          222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET---HNI-TLSQEDTLFGGQVSNLQVAE  290 (380)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~---~~~-~~~~~~~~~~~~i~~~DvA~  290 (380)
                         ......|+.+|.+.+.+.+       ..|+++++|+||++.++.......   ... .........+.+.+++|+|+
T Consensus       175 ---~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~  251 (275)
T 4imr_A          175 ---KSVVTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWMGRAGRPEEMVG  251 (275)
T ss_dssp             ---CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHSTTCSCBCGGGGHH
T ss_pred             ---CCCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhcCccCCCcCHHHHHH
Confidence               1234569999999998765       258999999999998873211000   000 00000112345678999999


Q ss_pred             HHHHHHhCC-CCccCcEEEEecC
Q 016901          291 LLACMAKNR-SLSYCKVVEVIAE  312 (380)
Q Consensus       291 ~i~~~l~~~-~~~~~~~~ni~~~  312 (380)
                      +++.++.+. ....|+++++.+|
T Consensus       252 ~v~fL~s~~a~~itG~~i~vdGG  274 (275)
T 4imr_A          252 AALFLASEACSFMTGETIFLTGG  274 (275)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESSC
T ss_pred             HHHHHcCcccCCCCCCEEEeCCC
Confidence            999999764 3357899988776

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.91  E-value=2.3e-23  Score=195.04  Aligned_cols=219  Identities=10%  Similarity=0.100  Sum_probs=157.0

Q ss_pred             CCCCCeEEEEcCCCh--HHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCCh
Q 016901           77 SKDDNLAFVAGATGK--VGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (380)
Q Consensus        77 ~~~~~~vlVtGatG~--iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~  154 (380)
                      .+++|++|||||+|+  ||+++++.|+++|++|+++.|+....+.+.+.....              .++.++.+|++|.
T Consensus        28 ~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--------------~~~~~~~~Dv~d~   93 (293)
T 3grk_A           28 LLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEEL--------------GAFVAGHCDVADA   93 (293)
T ss_dssp             TTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHH--------------TCEEEEECCTTCH
T ss_pred             cCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--------------CCceEEECCCCCH
Confidence            457899999999987  999999999999999999999965444333322221              4688999999999


Q ss_pred             hcHHHHh-------cCCCEEEEccccCcc----------ccCCCCCcchhhHHHHHHHHHHHHHcC--CCEEEEEccCCC
Q 016901          155 VQIEPAL-------GNASVVICCIGASEK----------EVFDITGPYRIDFQATKNLVDAATIAK--VNHFIMVSSLGT  215 (380)
Q Consensus       155 ~~~~~a~-------~~~d~Vi~~Ag~~~~----------~~~~~~~~~~~nv~g~~~ll~a~~~~~--v~r~V~~SS~~~  215 (380)
                      +++++++       +++|+||||||....          ...++...+++|+.++.++++++...-  .++||++||...
T Consensus        94 ~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~  173 (293)
T 3grk_A           94 ASIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGA  173 (293)
T ss_dssp             HHHHHHHHHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGG
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhh
Confidence            8888776       379999999996531          111233457899999999999987642  359999999766


Q ss_pred             CCCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccc--cceeeccCCcccCCCCCHH
Q 016901          216 NKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET--HNITLSQEDTLFGGQVSNL  286 (380)
Q Consensus       216 ~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~--~~~~~~~~~~~~~~~i~~~  286 (380)
                      ...      ......|+.+|.+.+.+.+       ..|+++++|+||++.++.......  ............+.+.+++
T Consensus       174 ~~~------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pe  247 (293)
T 3grk_A          174 EKV------MPNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTID  247 (293)
T ss_dssp             TSB------CTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHHHHHHHHHHHSTTSSCCCHH
T ss_pred             ccC------CCchHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchHHHHHHHHhcCCCCCCCCHH
Confidence            432      1234579999999998765       268999999999999874321100  0000001112234578999


Q ss_pred             HHHHHHHHHHhCC-CCccCcEEEEecCCCC
Q 016901          287 QVAELLACMAKNR-SLSYCKVVEVIAETTA  315 (380)
Q Consensus       287 DvA~~i~~~l~~~-~~~~~~~~ni~~~~~~  315 (380)
                      |+|++++.++.+. ....|+++++.+|...
T Consensus       248 dvA~~v~~L~s~~~~~itG~~i~vdGG~~~  277 (293)
T 3grk_A          248 EVGDVGLYFLSDLSRSVTGEVHHADSGYHV  277 (293)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHHcCccccCCcceEEEECCCccc
Confidence            9999999999764 3357899999888643

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.91  E-value=3e-23  Score=194.47  Aligned_cols=219  Identities=11%  Similarity=0.097  Sum_probs=160.8

Q ss_pred             CCCCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCCh
Q 016901           77 SKDDNLAFVAGATG--KVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (380)
Q Consensus        77 ~~~~~~vlVtGatG--~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~  154 (380)
                      .+++|++|||||+|  +||++++++|+++|++|++++|+.+..+.+.+.....              .++.++.+|++|.
T Consensus        27 ~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--------------~~~~~~~~Dv~d~   92 (296)
T 3k31_A           27 LMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESL--------------GVKLTVPCDVSDA   92 (296)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHH--------------TCCEEEECCTTCH
T ss_pred             ccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc--------------CCeEEEEcCCCCH
Confidence            45678999999998  9999999999999999999999976555544433322              4578999999999


Q ss_pred             hcHHHHh-------cCCCEEEEccccCcc----------ccCCCCCcchhhHHHHHHHHHHHHHcC--CCEEEEEccCCC
Q 016901          155 VQIEPAL-------GNASVVICCIGASEK----------EVFDITGPYRIDFQATKNLVDAATIAK--VNHFIMVSSLGT  215 (380)
Q Consensus       155 ~~~~~a~-------~~~d~Vi~~Ag~~~~----------~~~~~~~~~~~nv~g~~~ll~a~~~~~--v~r~V~~SS~~~  215 (380)
                      +++++++       +++|+||||||....          ...++...+++|+.|+.++++++...-  .++||++||.+.
T Consensus        93 ~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~  172 (296)
T 3k31_A           93 ESVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGA  172 (296)
T ss_dssp             HHHHHHHHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGG
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhh
Confidence            8888776       478999999996532          111234458899999999999987643  349999999766


Q ss_pred             CCCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccccccc-c-eeeccCCcccCCCCCHH
Q 016901          216 NKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH-N-ITLSQEDTLFGGQVSNL  286 (380)
Q Consensus       216 ~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~-~-~~~~~~~~~~~~~i~~~  286 (380)
                      ...      ......|+.+|.+.+.+.+       ..|+++++|+||++.++........ . ..........+.+.+++
T Consensus       173 ~~~------~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pe  246 (296)
T 3k31_A          173 EKV------VPHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPLRRNTTLD  246 (296)
T ss_dssp             TSC------CTTTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHHHHHHHHHHHHSTTSSCCCHH
T ss_pred             ccC------CCCchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccchHHHHHHHHhcCCCCCCCCHH
Confidence            432      1234579999999998765       2689999999999998753211000 0 00001112234578999


Q ss_pred             HHHHHHHHHHhCC-CCccCcEEEEecCCCC
Q 016901          287 QVAELLACMAKNR-SLSYCKVVEVIAETTA  315 (380)
Q Consensus       287 DvA~~i~~~l~~~-~~~~~~~~ni~~~~~~  315 (380)
                      |+|++++.++.+. ....|+++++.+|...
T Consensus       247 dvA~~v~fL~s~~a~~itG~~i~vdGG~~~  276 (296)
T 3k31_A          247 DVGGAALYLLSDLGRGTTGETVHVDCGYHV  276 (296)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHHcCCccCCccCCEEEECCCccc
Confidence            9999999999864 3457999999888644

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.91  E-value=2.6e-23  Score=189.75  Aligned_cols=207  Identities=14%  Similarity=0.079  Sum_probs=148.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++++||||||+|+||++++++|+++|++|++++|+.++.+                        .+..+.+|++|.+++
T Consensus        13 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~------------------------~~~~~~~D~~~~~~~   68 (247)
T 1uzm_A           13 FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK------------------------GLFGVEVDVTDSDAV   68 (247)
T ss_dssp             CCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT------------------------TSEEEECCTTCHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH------------------------HhcCeeccCCCHHHH
Confidence            46789999999999999999999999999999999875421                        222478999999888


Q ss_pred             HHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCCCC
Q 016901          158 EPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~~~  220 (380)
                      +++++       ++|+||||||......      .++...+++|+.|+.++++++.    +.+.++||++||......  
T Consensus        69 ~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~--  146 (247)
T 1uzm_A           69 DRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWG--  146 (247)
T ss_dssp             HHHHHHHHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccC--
Confidence            77763       6899999999653221      1234457899999999988774    456789999999865321  


Q ss_pred             chhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHH
Q 016901          221 PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA  293 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~  293 (380)
                          ......|+.+|.+.+.+.+.       .|+++++|+||++.++...................+.+++++|+|++++
T Consensus       147 ----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~  222 (247)
T 1uzm_A          147 ----IGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVVS  222 (247)
T ss_dssp             ------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHHHHHHHGGGCTTCSCBCHHHHHHHHH
T ss_pred             ----CCCChhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence                12345799999999877652       6899999999999876321100000000001112245789999999999


Q ss_pred             HHHhCC-CCccCcEEEEecCCC
Q 016901          294 CMAKNR-SLSYCKVVEVIAETT  314 (380)
Q Consensus       294 ~~l~~~-~~~~~~~~ni~~~~~  314 (380)
                      .++.+. ....|++|++.+|..
T Consensus       223 ~l~s~~~~~~~G~~i~vdgG~~  244 (247)
T 1uzm_A          223 FLASEDASYISGAVIPVDGGMG  244 (247)
T ss_dssp             HHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHcCccccCCcCCEEEECCCcc
Confidence            999754 335689999988753

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.91  E-value=8.6e-23  Score=194.12  Aligned_cols=215  Identities=14%  Similarity=0.054  Sum_probs=158.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEe-CCchhHHHHHHHHH-hhhhcccccccCCCCCCceEEEEcCCCChh
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGV-RSVQRAENLVQSVK-QMKLDGELANKGIQPVEMLELVECDLEKRV  155 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~-R~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~  155 (380)
                      +.+++||||||+|+||+++++.|+++|++|++++ |+.++.+++.+.+. ..+             .++.++.+|++|.+
T Consensus        44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~-------------~~~~~~~~Dl~d~~  110 (328)
T 2qhx_A           44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRP-------------NSAITVQADLSNVA  110 (328)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST-------------TCEEEEECCCSSSC
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcC-------------CeEEEEEeeCCCch
Confidence            5678999999999999999999999999999999 99887777666553 111             57899999999988


Q ss_pred             -----------------cHHHHhc-------CCCEEEEccccCccccC--------------------CCCCcchhhHHH
Q 016901          156 -----------------QIEPALG-------NASVVICCIGASEKEVF--------------------DITGPYRIDFQA  191 (380)
Q Consensus       156 -----------------~~~~a~~-------~~d~Vi~~Ag~~~~~~~--------------------~~~~~~~~nv~g  191 (380)
                                       +++++++       ++|+||||||.......                    ++...+++|+.|
T Consensus       111 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g  190 (328)
T 2qhx_A          111 TAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIA  190 (328)
T ss_dssp             BCC-------CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHH
T ss_pred             hccccccccccccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHH
Confidence                             8877764       79999999996532211                    122347899999


Q ss_pred             HHHHHHHHH----HcC------CCEEEEEccCCCCCCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEec
Q 016901          192 TKNLVDAAT----IAK------VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRP  254 (380)
Q Consensus       192 ~~~ll~a~~----~~~------v~r~V~~SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRp  254 (380)
                      +.++++++.    +.+      .++||++||.......      .....|+.+|.+.+.+.+       ..|+++++|+|
T Consensus       191 ~~~l~~~~~~~m~~~~~~~~~~~g~IV~isS~~~~~~~------~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~P  264 (328)
T 2qhx_A          191 PYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPL------LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGP  264 (328)
T ss_dssp             HHHHHHHHHHHHHHSCGGGSCSCEEEEEECCTTTTSCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             HHHHHHHHHHHHHhcCCcCCCCCcEEEEECchhhccCC------CCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEec
Confidence            999888765    444      5799999998764321      234579999999997765       25899999999


Q ss_pred             CcccCCCcccccccceeeccCCcccC-CCCCHHHHHHHHHHHHhCC-CCccCcEEEEecCC
Q 016901          255 GGMERPTDAYKETHNITLSQEDTLFG-GQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET  313 (380)
Q Consensus       255 g~v~gp~~~~~~~~~~~~~~~~~~~~-~~i~~~DvA~~i~~~l~~~-~~~~~~~~ni~~~~  313 (380)
                      |++.++. .........+. .....+ .+.+++|+|++++.++... ....|+++++.+|.
T Consensus       265 G~v~T~~-~~~~~~~~~~~-~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~  323 (328)
T 2qhx_A          265 GLSVLVD-DMPPAVWEGHR-SKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGY  323 (328)
T ss_dssp             SSBSCCC-CSCHHHHHHHH-TTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CcccCCc-cccHHHHHHHH-hhCCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCCc
Confidence            9999885 11100000000 111223 4689999999999999753 33568899988875

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.91  E-value=6.5e-23  Score=186.09  Aligned_cols=208  Identities=17%  Similarity=0.134  Sum_probs=149.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      +|+++||||+|+||++++++|+++|++|++++|+.++..+   .                  -++.++.+|++| +++++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~---~------------------~~~~~~~~D~~~-~~~~~   59 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQ---S------------------LGAVPLPTDLEK-DDPKG   59 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHH---H------------------HTCEEEECCTTT-SCHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH---h------------------hCcEEEecCCch-HHHHH
Confidence            4789999999999999999999999999999999865211   1                  127788999999 77766


Q ss_pred             Hh-------cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCCCCch
Q 016901          160 AL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGFPA  222 (380)
Q Consensus       160 a~-------~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~~~~~  222 (380)
                      ++       +++|+||||||......      .++...+++|+.|+.++++++    ++.+.++||++||........  
T Consensus        60 ~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--  137 (239)
T 2ekp_A           60 LVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGG--  137 (239)
T ss_dssp             HHHHHHHHHTSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT--
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCC--
Confidence            54       47999999999653221      123344789999998888876    445678999999986643210  


Q ss_pred             hhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCccccc-ccce-eeccCCcccCCCCCHHHHHHHHH
Q 016901          223 AILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE-THNI-TLSQEDTLFGGQVSNLQVAELLA  293 (380)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~-~~~~-~~~~~~~~~~~~i~~~DvA~~i~  293 (380)
                        ......|+.+|.+.+.+.+.       .|+++++||||++.++...... .... .........+.+.+++|+|++++
T Consensus       138 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~  215 (239)
T 2ekp_A          138 --PVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQNPELYEPITARIPMGRWARPEEIARVAA  215 (239)
T ss_dssp             --TSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHTTCTTSSCBCHHHHHHHHH
T ss_pred             --CCCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccCHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence              12345799999999977652       5999999999999987432110 0000 00001112345789999999999


Q ss_pred             HHHhCCC-CccCcEEEEecCC
Q 016901          294 CMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       294 ~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      .++.+.. ...|+++++.+|.
T Consensus       216 ~l~s~~~~~~tG~~~~vdgG~  236 (239)
T 2ekp_A          216 VLCGDEAEYLTGQAVAVDGGF  236 (239)
T ss_dssp             HHTSGGGTTCCSCEEEESTTT
T ss_pred             HHcCchhcCCCCCEEEECCCc
Confidence            9987642 3468889888774

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.91  E-value=1e-23  Score=194.46  Aligned_cols=202  Identities=15%  Similarity=0.068  Sum_probs=151.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHH-CCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLK-LGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~-~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      ++++||||||+|+||++++++|++ +|++|++++|+.++.....+.+...+             .++.++.+|++|.+++
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~-------------~~~~~~~~Dl~~~~~~   69 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG-------------LSPRFHQLDIDDLQSI   69 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTT-------------CCCEEEECCTTCHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcC-------------CeeEEEECCCCCHHHH
Confidence            568999999999999999999999 99999999999887776666554321             5688999999999888


Q ss_pred             HHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHHHcC--CCEEEEEccCCCCCC--C-
Q 016901          158 EPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIAK--VNHFIMVSSLGTNKF--G-  219 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~~~~--v~r~V~~SS~~~~~~--~-  219 (380)
                      +++++       ++|+||||||......      .++...+++|+.|+.++++++....  .++||++||......  . 
T Consensus        70 ~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~  149 (276)
T 1wma_A           70 RALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSC  149 (276)
T ss_dssp             HHHHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTS
T ss_pred             HHHHHHHHHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccC
Confidence            88775       7999999999653221      1223347899999999999998653  249999999654210  0 


Q ss_pred             -------------Cchh-------------------hhchhhHHHHHHHHHHHHHH-------H----CCCCEEEEecCc
Q 016901          220 -------------FPAA-------------------ILNLFWGVLLWKRKAEEALI-------A----SGLPYTIVRPGG  256 (380)
Q Consensus       220 -------------~~~~-------------------~~~~~~~Y~~sK~~~E~~l~-------~----~g~~~~ivRpg~  256 (380)
                                   .+..                   ...+...|+.+|.+.|.+++       .    .|+++++|+||+
T Consensus       150 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~  229 (276)
T 1wma_A          150 SPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGW  229 (276)
T ss_dssp             CHHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCS
T ss_pred             ChhHHhhccccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCc
Confidence                         0000                   00123679999999987764       2    589999999999


Q ss_pred             ccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHHHHhCCC---CccCcEEE
Q 016901          257 MERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRS---LSYCKVVE  308 (380)
Q Consensus       257 v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~~---~~~~~~~n  308 (380)
                      +.++....               ..+++++|+|++++.++..+.   ...|++|+
T Consensus       230 v~t~~~~~---------------~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~  269 (276)
T 1wma_A          230 VRTDMAGP---------------KATKSPEEGAETPVYLALLPPDAEGPHGQFVS  269 (276)
T ss_dssp             BCSTTTCT---------------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE
T ss_pred             cccCcCCc---------------cccCChhHhhhhHhhhhcCcccccccCceEec
Confidence            98774311               246899999999999998552   33566554

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.91  E-value=5.3e-23  Score=194.83  Aligned_cols=207  Identities=14%  Similarity=0.039  Sum_probs=146.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .+.+++||||||+|+||++++++|+++|++|++++|+.++.+.+.+.+...+.           ..++.++.+|++|.++
T Consensus         5 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~-----------~~~~~~~~~Dl~~~~~   73 (319)
T 3ioy_A            5 DFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGS-----------GPEVMGVQLDVASREG   73 (319)
T ss_dssp             CCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTC-----------GGGEEEEECCTTCHHH
T ss_pred             CCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-----------CCeEEEEECCCCCHHH
Confidence            45678999999999999999999999999999999999988877776654321           1378999999999988


Q ss_pred             HHHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHHHc----------CCCEEEEEccC
Q 016901          157 IEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIA----------KVNHFIMVSSL  213 (380)
Q Consensus       157 ~~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~~~----------~v~r~V~~SS~  213 (380)
                      ++++++       ++|+||||||......      .++...+++|+.|+.++++++...          +.++||++||.
T Consensus        74 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~  153 (319)
T 3ioy_A           74 FKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASM  153 (319)
T ss_dssp             HHHHHHHHHHHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCG
T ss_pred             HHHHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEeccc
Confidence            887763       6899999999653222      123345889999999998887532          34689999998


Q ss_pred             CCCCCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccccccccee------------ecc
Q 016901          214 GTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNIT------------LSQ  274 (380)
Q Consensus       214 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~------------~~~  274 (380)
                      ......      .....|+.||.+.+.+.+       ..|+++++|+||+|.++...........            ...
T Consensus       154 a~~~~~------~~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (319)
T 3ioy_A          154 AAFLAA------GSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVER  227 (319)
T ss_dssp             GGTCCC------SSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC----------------------------
T ss_pred             ccccCC------CCCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHH
Confidence            764321      233579999997665543       3689999999999988743211000000            000


Q ss_pred             CCcccCCCCCHHHHHHHHHHHHhCCC
Q 016901          275 EDTLFGGQVSNLQVAELLACMAKNRS  300 (380)
Q Consensus       275 ~~~~~~~~i~~~DvA~~i~~~l~~~~  300 (380)
                      ........++++|+|+.++.+++.+.
T Consensus       228 ~~~~~~~~~~pe~vA~~~~~al~~~~  253 (319)
T 3ioy_A          228 LAGVHEFGMEPDVIGARVIEAMKANR  253 (319)
T ss_dssp             -CCGGGSSBCHHHHHHHHHHHHHTTC
T ss_pred             HHHhhhcCCCHHHHHHHHHHHHHcCC
Confidence            00111112899999999999999865

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.91  E-value=2.6e-23  Score=191.68  Aligned_cols=205  Identities=14%  Similarity=0.095  Sum_probs=151.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++|+||||||+|+||++++++|+++|++|++++|+.++                        ..++.++.+|++|.+++
T Consensus         6 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~------------------------~~~~~~~~~Dl~~~~~v   61 (264)
T 2dtx_A            6 LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG------------------------EAKYDHIECDVTNPDQV   61 (264)
T ss_dssp             GTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC------------------------SCSSEEEECCTTCHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc------------------------CCceEEEEecCCCHHHH
Confidence            467899999999999999999999999999999998653                        05688999999999888


Q ss_pred             HHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHHH----cCCCEEEEEccCCCCCCCC
Q 016901          158 EPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~~----~~v~r~V~~SS~~~~~~~~  220 (380)
                      +++++       ++|+||||||......      .++...+++|+.|+.++++++..    .+.++||++||....... 
T Consensus        62 ~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-  140 (264)
T 2dtx_A           62 KASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIIT-  140 (264)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCC-
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCC-
Confidence            87764       7999999999653221      12334478999999888887753    456799999998764321 


Q ss_pred             chhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCccccc------c-----cceeeccCCcccCCC
Q 016901          221 PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE------T-----HNITLSQEDTLFGGQ  282 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~------~-----~~~~~~~~~~~~~~~  282 (380)
                           .....|+.+|.+.+.+.+.       . +++++|+||++.++......      .     ............+.+
T Consensus       141 -----~~~~~Y~~sK~a~~~~~~~la~e~~~~-i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~  214 (264)
T 2dtx_A          141 -----KNASAYVTSKHAVIGLTKSIALDYAPL-LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRI  214 (264)
T ss_dssp             -----TTBHHHHHHHHHHHHHHHHHHHHHTTT-SEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHSTTSSC
T ss_pred             -----CCchhHHHHHHHHHHHHHHHHHHhcCC-cEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhcCCCCCC
Confidence                 2345799999999987752       3 99999999999876321100      0     000000001123457


Q ss_pred             CCHHHHHHHHHHHHhCCC-CccCcEEEEecCC
Q 016901          283 VSNLQVAELLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       283 i~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      ++++|+|++++.++.++. ...|++|++.++.
T Consensus       215 ~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~  246 (264)
T 2dtx_A          215 GKPQEVASAVAFLASREASFITGTCLYVDGGL  246 (264)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             cCHHHHHHHHHHHhCchhcCCCCcEEEECCCc
Confidence            899999999999997643 3568899988874

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.91  E-value=5.6e-23  Score=187.98  Aligned_cols=218  Identities=16%  Similarity=0.122  Sum_probs=159.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-eCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAG-VRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l-~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~  155 (380)
                      ++++|+++||||+|+||++++++|+++|++|+++ .|+.+..++....+...+             .++.++.+|++|.+
T Consensus         4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~D~~~~~   70 (255)
T 3icc_A            4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNG-------------GSAFSIGANLESLH   70 (255)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTT-------------CEEEEEECCTTSHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcC-------------CceEEEecCcCCHH
Confidence            4578999999999999999999999999999886 566666666665554322             57889999999988


Q ss_pred             cHHHHhc-------------CCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHHHHc--CCCEEEEEccCC
Q 016901          156 QIEPALG-------------NASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLG  214 (380)
Q Consensus       156 ~~~~a~~-------------~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~~~~--~v~r~V~~SS~~  214 (380)
                      +++++++             .+|+||||||.......      ++...+++|+.|+.++++++...  +.++||++||..
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~  150 (255)
T 3icc_A           71 GVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAA  150 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGG
T ss_pred             HHHHHHHHHHHHhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChh
Confidence            8777653             39999999996533221      22334789999999999998754  335899999976


Q ss_pred             CCCCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccc--eeeccCCcccCCCCCH
Q 016901          215 TNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHN--ITLSQEDTLFGGQVSN  285 (380)
Q Consensus       215 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~--~~~~~~~~~~~~~i~~  285 (380)
                      .....      .....|+.+|.+.+.+.+       ..|+++++|+||++.++.........  ..........+.+.++
T Consensus       151 ~~~~~------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (255)
T 3icc_A          151 TRISL------PDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISAFNRLGEV  224 (255)
T ss_dssp             GTSCC------TTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHHHHHHHHHTSTTSSCBCH
T ss_pred             hccCC------CCcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHHHHHhhhccCCcCCCCCH
Confidence            64321      234579999999997765       26899999999999887432111110  0111111223456899


Q ss_pred             HHHHHHHHHHHhCC-CCccCcEEEEecCC
Q 016901          286 LQVAELLACMAKNR-SLSYCKVVEVIAET  313 (380)
Q Consensus       286 ~DvA~~i~~~l~~~-~~~~~~~~ni~~~~  313 (380)
                      +|+|++++.++... ....|+++++.+|.
T Consensus       225 ~dva~~~~~l~s~~~~~~tG~~i~vdgG~  253 (255)
T 3icc_A          225 EDIADTAAFLASPDSRWVTGQLIDVSGGS  253 (255)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESSST
T ss_pred             HHHHHHHHHHhCcccCCccCCEEEecCCe
Confidence            99999999998654 33578999998875

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.91  E-value=1.3e-23  Score=196.17  Aligned_cols=220  Identities=13%  Similarity=0.146  Sum_probs=160.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC---eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCCh
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGF---RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~---~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~  154 (380)
                      +.+|++|||||+|+||++++++|+++|+   +|+++.|+.++.+++.+.+....           ...++.++.+|++|.
T Consensus        31 l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~-----------~~~~~~~~~~Dv~d~   99 (287)
T 3rku_A           31 LAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEF-----------PNAKVHVAQLDITQA   99 (287)
T ss_dssp             HTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHC-----------TTCEEEEEECCTTCG
T ss_pred             cCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhC-----------CCCeEEEEECCCCCH
Confidence            3678999999999999999999999987   99999999988887777665421           015789999999999


Q ss_pred             hcHHHHhc-------CCCEEEEccccCc-cc------cCCCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCC
Q 016901          155 VQIEPALG-------NASVVICCIGASE-KE------VFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTN  216 (380)
Q Consensus       155 ~~~~~a~~-------~~d~Vi~~Ag~~~-~~------~~~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~  216 (380)
                      ++++++++       ++|+||||||... ..      ..++...+++|+.|+.++++++    ++.+.++||++||....
T Consensus       100 ~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~  179 (287)
T 3rku_A          100 EKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGR  179 (287)
T ss_dssp             GGHHHHHHTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGT
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhc
Confidence            99988874       6899999999653 11      1123445889999999999887    45567899999997664


Q ss_pred             CCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHH
Q 016901          217 KFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVA  289 (380)
Q Consensus       217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA  289 (380)
                      ...      .....|+.+|.+.+.+.+       ..|+++++|+||+|.++.....................+++++|+|
T Consensus       180 ~~~------~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~pedvA  253 (287)
T 3rku_A          180 DAY------PTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKDTTPLMADDVA  253 (287)
T ss_dssp             SCC------TTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHHHTTSCCEEHHHHH
T ss_pred             CCC------CCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHHHHHhhcccCCCCHHHHH
Confidence            321      234579999999998765       2689999999999988732100000000000000011245899999


Q ss_pred             HHHHHHHhCCCC-ccCcEEEEecCCC
Q 016901          290 ELLACMAKNRSL-SYCKVVEVIAETT  314 (380)
Q Consensus       290 ~~i~~~l~~~~~-~~~~~~ni~~~~~  314 (380)
                      ++++.++.++.. ..++++.+.+++.
T Consensus       254 ~~v~~l~s~~~~~i~g~~i~v~~g~~  279 (287)
T 3rku_A          254 DLIVYATSRKQNTVIADTLIFPTNQA  279 (287)
T ss_dssp             HHHHHHHTSCTTEEEEEEEEEETTEE
T ss_pred             HHHHHHhCCCCCeEecceEEeeCCCC
Confidence            999999987652 3578888877764

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.91  E-value=2.5e-23  Score=194.16  Aligned_cols=217  Identities=15%  Similarity=0.131  Sum_probs=156.1

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCc-hhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCC--
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV-QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK--  153 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d--  153 (380)
                      .+++|++|||||+|+||++++++|+++|++|++++|+. ++.+++.+.+...        .    ..++.++.+|++|  
T Consensus        20 ~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~--------~----~~~~~~~~~Dv~~~~   87 (288)
T 2x9g_A           20 HMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKE--------R----SNTAVVCQADLTNSN   87 (288)
T ss_dssp             --CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHH--------S----TTCEEEEECCCSCST
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhh--------c----CCceEEEEeecCCcc
Confidence            34678999999999999999999999999999999998 7766665554311        0    1578899999999  


Q ss_pred             --hhcHHHHh-------cCCCEEEEccccCccccC----------------CCCCcchhhHHHHHHHHHHHHHc----C-
Q 016901          154 --RVQIEPAL-------GNASVVICCIGASEKEVF----------------DITGPYRIDFQATKNLVDAATIA----K-  203 (380)
Q Consensus       154 --~~~~~~a~-------~~~d~Vi~~Ag~~~~~~~----------------~~~~~~~~nv~g~~~ll~a~~~~----~-  203 (380)
                        .+++++++       +++|+||||||.......                ++...+++|+.|+.++++++...    + 
T Consensus        88 ~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~  167 (288)
T 2x9g_A           88 VLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNP  167 (288)
T ss_dssp             THHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC-----
T ss_pred             CCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCC
Confidence              87777766       379999999996532211                11234789999999998887542    2 


Q ss_pred             -----CCEEEEEccCCCCCCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccccccccee
Q 016901          204 -----VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNIT  271 (380)
Q Consensus       204 -----v~r~V~~SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~  271 (380)
                           .++||++||......      ......|+.+|++.+.+.+       ..|+++++|+||++++|. .........
T Consensus       168 ~~~~~~g~iv~isS~~~~~~------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~~~~~~~~~  240 (288)
T 2x9g_A          168 NCTSSNLSIVNLCDAMVDQP------CMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-AMGEEEKDK  240 (288)
T ss_dssp             ---CCCEEEEEECCTTTTSC------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-TSCHHHHHH
T ss_pred             CCCCCCeEEEEEecccccCC------CCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-ccChHHHHH
Confidence                 459999999876432      1234579999999887765       258999999999999985 211000000


Q ss_pred             eccCCcccCCC-CCHHHHHHHHHHHHhCC-CCccCcEEEEecCC
Q 016901          272 LSQEDTLFGGQ-VSNLQVAELLACMAKNR-SLSYCKVVEVIAET  313 (380)
Q Consensus       272 ~~~~~~~~~~~-i~~~DvA~~i~~~l~~~-~~~~~~~~ni~~~~  313 (380)
                      +. .....+.+ .+++|+|++++.++... ....|+++++.+|.
T Consensus       241 ~~-~~~p~~r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~  283 (288)
T 2x9g_A          241 WR-RKVPLGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGL  283 (288)
T ss_dssp             HH-HTCTTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HH-hhCCCCCCCCCHHHHHHHHHHHhCccccCccCCEEEECcch
Confidence            00 11122345 79999999999999764 33568889888774

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.90  E-value=7.9e-23  Score=185.20  Aligned_cols=190  Identities=17%  Similarity=0.080  Sum_probs=142.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      +++++|||||+|+||++++++|+++|++|++++|+.++.+++.+.+.                .++.++.+|++|.++++
T Consensus         2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------------~~~~~~~~D~~~~~~v~   65 (235)
T 3l6e_A            2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLG----------------NAVIGIVADLAHHEDVD   65 (235)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG----------------GGEEEEECCTTSHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc----------------CCceEEECCCCCHHHHH
Confidence            46899999999999999999999999999999999888776655431                46889999999998887


Q ss_pred             HHh-------cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHHH----cCCCEEEEEccCCCCCCCCc
Q 016901          159 PAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFGFP  221 (380)
Q Consensus       159 ~a~-------~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~~----~~v~r~V~~SS~~~~~~~~~  221 (380)
                      +++       +++|+||||||......      .++...+++|+.|+.++++++..    .+ .+||++||.......  
T Consensus        66 ~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~--  142 (235)
T 3l6e_A           66 VAFAAAVEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG-GVLANVLSSAAQVGK--  142 (235)
T ss_dssp             HHHHHHHHHHCSCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-EEEEEECCEECCSSC--
T ss_pred             HHHHHHHHhcCCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEEeCHHhcCCC--
Confidence            776       36899999999753221      12334588999999998888743    23 399999997653321  


Q ss_pred             hhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHH
Q 016901          222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLAC  294 (380)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~  294 (380)
                          .....|+.+|.+.+.+.+       ..|++++.|+||.+.++.......         .....+++++|+|++++.
T Consensus       143 ----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~---------~~~~~~~~pedvA~~v~~  209 (235)
T 3l6e_A          143 ----ANESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTDH---------VDPSGFMTPEDAAAYMLD  209 (235)
T ss_dssp             ----SSHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC--------------------CBCHHHHHHHHHH
T ss_pred             ----CCCcHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhccCC---------CCCcCCCCHHHHHHHHHH
Confidence                234579999999998765       268999999999998764211100         112257899999999999


Q ss_pred             HHhCCC
Q 016901          295 MAKNRS  300 (380)
Q Consensus       295 ~l~~~~  300 (380)
                      ++.++.
T Consensus       210 l~~~~~  215 (235)
T 3l6e_A          210 ALEARS  215 (235)
T ss_dssp             HTCCCS
T ss_pred             HHhCCC
Confidence            998655

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.90  E-value=4.6e-23  Score=189.97  Aligned_cols=220  Identities=12%  Similarity=0.095  Sum_probs=158.9

Q ss_pred             CCCCeEEEEcCCCh--HHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh
Q 016901           78 KDDNLAFVAGATGK--VGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (380)
Q Consensus        78 ~~~~~vlVtGatG~--iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~  155 (380)
                      ++++++|||||+|+  ||++++++|+++|++|+++.|+....+.+.+.....+            ..++.++.+|++|.+
T Consensus         5 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------------~~~~~~~~~D~~~~~   72 (266)
T 3oig_A            5 LEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLD------------RNDSIILPCDVTNDA   72 (266)
T ss_dssp             CTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSS------------SCCCEEEECCCSSSH
T ss_pred             cCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcC------------CCCceEEeCCCCCHH
Confidence            46789999999988  9999999999999999999998765555444333221            137999999999998


Q ss_pred             cHHHHh-------cCCCEEEEccccCcc----c------cCCCCCcchhhHHHHHHHHHHHHHcC--CCEEEEEccCCCC
Q 016901          156 QIEPAL-------GNASVVICCIGASEK----E------VFDITGPYRIDFQATKNLVDAATIAK--VNHFIMVSSLGTN  216 (380)
Q Consensus       156 ~~~~a~-------~~~d~Vi~~Ag~~~~----~------~~~~~~~~~~nv~g~~~ll~a~~~~~--v~r~V~~SS~~~~  216 (380)
                      ++++++       +.+|+||||||....    .      ..++...+++|+.++.++++++...-  -++||++||....
T Consensus        73 ~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~  152 (266)
T 3oig_A           73 EIETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGE  152 (266)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGT
T ss_pred             HHHHHHHHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEeccccc
Confidence            888776       378999999996531    1      11223347899999999999987653  2489999997664


Q ss_pred             CCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccc--cceeeccCCcccCCCCCHHH
Q 016901          217 KFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET--HNITLSQEDTLFGGQVSNLQ  287 (380)
Q Consensus       217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~--~~~~~~~~~~~~~~~i~~~D  287 (380)
                      ..      ......|+.+|.+.+.+.+       ..|+++++|+||++.++.......  ............+.+.+++|
T Consensus       153 ~~------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~d  226 (266)
T 3oig_A          153 LV------MPNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPLRRTTTPEE  226 (266)
T ss_dssp             SC------CTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHHH
T ss_pred             cc------CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchHHHHHHHHhcCCCCCCCCHHH
Confidence            32      1234579999999997765       268999999999998864321100  00000011112345689999


Q ss_pred             HHHHHHHHHhCC-CCccCcEEEEecCCCC
Q 016901          288 VAELLACMAKNR-SLSYCKVVEVIAETTA  315 (380)
Q Consensus       288 vA~~i~~~l~~~-~~~~~~~~ni~~~~~~  315 (380)
                      +|++++.++.+. ....|+++++.+|-..
T Consensus       227 va~~v~~l~s~~~~~~tG~~i~vdGG~~~  255 (266)
T 3oig_A          227 VGDTAAFLFSDMSRGITGENLHVDSGFHI  255 (266)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHcCCchhcCcCCEEEECCCeEE
Confidence            999999999864 3356899999887644

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.90  E-value=1.2e-22  Score=189.88  Aligned_cols=218  Identities=14%  Similarity=0.053  Sum_probs=157.7

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEe-CCchhHHHHHHHHH-hhhhcccccccCCCCCCceEEEEcCCC
Q 016901           75 ADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGV-RSVQRAENLVQSVK-QMKLDGELANKGIQPVEMLELVECDLE  152 (380)
Q Consensus        75 ~~~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~-R~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~Dl~  152 (380)
                      |..+++|++|||||+|+||+++++.|+++|++|++++ |+.++.+.+.+.+. ..+             .++.++.+|++
T Consensus         4 m~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~-------------~~~~~~~~Dl~   70 (291)
T 1e7w_A            4 MTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRP-------------NSAITVQADLS   70 (291)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST-------------TCEEEEECCCS
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcC-------------CeeEEEEeecC
Confidence            3345778999999999999999999999999999999 99887777665554 211             57899999999


Q ss_pred             Chh-----------------cHHHHhc-------CCCEEEEccccCccccC--------------------CCCCcchhh
Q 016901          153 KRV-----------------QIEPALG-------NASVVICCIGASEKEVF--------------------DITGPYRID  188 (380)
Q Consensus       153 d~~-----------------~~~~a~~-------~~d~Vi~~Ag~~~~~~~--------------------~~~~~~~~n  188 (380)
                      |.+                 ++.++++       ++|+||||||.......                    ++...+++|
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N  150 (291)
T 1e7w_A           71 NVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSN  150 (291)
T ss_dssp             SSCBCCCC----CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHH
T ss_pred             CcccccccccccccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHH
Confidence            998                 8877764       79999999996532211                    122347899


Q ss_pred             HHHHHHHHHHHH----HcC------CCEEEEEccCCCCCCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEE
Q 016901          189 FQATKNLVDAAT----IAK------VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTI  251 (380)
Q Consensus       189 v~g~~~ll~a~~----~~~------v~r~V~~SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~i  251 (380)
                      +.|+.++++++.    +.+      .++||++||.......      .....|+.+|.+.+.+.+       ..|+++++
T Consensus       151 ~~g~~~l~~~~~~~m~~~~~~~~~~~g~Iv~isS~~~~~~~------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~  224 (291)
T 1e7w_A          151 AIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPL------LGYTIYTMAKGALEGLTRSAALELAPLQIRVNG  224 (291)
T ss_dssp             THHHHHHHHHHHHHHHTSCGGGSCSCEEEEEECCTTTTSCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCcEEEEEechhhcCCC------CCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEE
Confidence            999999888775    344      5799999998764321      234579999999987765       26899999


Q ss_pred             EecCcccCCCcccccccceeeccCCcccC-CCCCHHHHHHHHHHHHhCC-CCccCcEEEEecCC
Q 016901          252 VRPGGMERPTDAYKETHNITLSQEDTLFG-GQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET  313 (380)
Q Consensus       252 vRpg~v~gp~~~~~~~~~~~~~~~~~~~~-~~i~~~DvA~~i~~~l~~~-~~~~~~~~ni~~~~  313 (380)
                      |+||++.++. .........+. .....+ .+.+++|+|++++.++... ....|+++++.+|.
T Consensus       225 v~PG~v~T~~-~~~~~~~~~~~-~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~  286 (291)
T 1e7w_A          225 VGPGLSVLVD-DMPPAVWEGHR-SKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGY  286 (291)
T ss_dssp             EEESSBCCGG-GSCHHHHHHHH-TTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             EeeCCccCCc-cCCHHHHHHHH-hhCCCCCCCCCHHHHHHHHHHHhCCcccCccCcEEEECCCc
Confidence            9999998774 21000000000 111223 4689999999999999754 33568889888774

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.90  E-value=5.6e-23  Score=189.82  Aligned_cols=217  Identities=13%  Similarity=0.085  Sum_probs=153.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEe-CCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGV-RSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~-R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      +++|++|||||+|+||++++++|+++|++|++.. |+.+..+++.+.+...+             .++.++.+|++|.++
T Consensus        25 ~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~Dl~~~~~   91 (267)
T 3u5t_A           25 ETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAG-------------GKALTAQADVSDPAA   91 (267)
T ss_dssp             --CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTT-------------CCEEEEECCTTCHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC-------------CeEEEEEcCCCCHHH
Confidence            3578999999999999999999999999999874 55666666665554432             578999999999988


Q ss_pred             HHHHhc-------CCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHHHHcC--CCEEEEEccCCCCCCCCc
Q 016901          157 IEPALG-------NASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAATIAK--VNHFIMVSSLGTNKFGFP  221 (380)
Q Consensus       157 ~~~a~~-------~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~~~~~--v~r~V~~SS~~~~~~~~~  221 (380)
                      ++++++       ++|+||||||.......      ++...+++|+.|+.++++++...-  .++||++||......   
T Consensus        92 v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~---  168 (267)
T 3u5t_A           92 VRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLL---  168 (267)
T ss_dssp             HHHHHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHC---
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccC---
Confidence            887763       79999999996532221      233447799999999999886532  258999999754221   


Q ss_pred             hhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCccccc-ccceeeccCCcccCCCCCHHHHHHHHH
Q 016901          222 AAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE-THNITLSQEDTLFGGQVSNLQVAELLA  293 (380)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~-~~~~~~~~~~~~~~~~i~~~DvA~~i~  293 (380)
                         ......|+.+|.+.+.+.+.       .|+++++|+||++.++...... .............+.+.+++|+|++++
T Consensus       169 ---~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~  245 (267)
T 3u5t_A          169 ---HPSYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDEVRDRFAKLAPLERLGTPQDIAGAVA  245 (267)
T ss_dssp             ---CTTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC-----------CHHHHHTSSTTCSCBCHHHHHHHHH
T ss_pred             ---CCCchHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence               12345799999999988762       6899999999999887421100 000001111222345789999999999


Q ss_pred             HHHhCCC-CccCcEEEEecCC
Q 016901          294 CMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       294 ~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      .++.... ...|+++++.+|.
T Consensus       246 ~L~s~~~~~itG~~i~vdGG~  266 (267)
T 3u5t_A          246 FLAGPDGAWVNGQVLRANGGI  266 (267)
T ss_dssp             HHHSTTTTTCCSEEEEESSSC
T ss_pred             HHhCccccCccCCEEEeCCCc
Confidence            9997643 3578899887763

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.90  E-value=2.1e-23  Score=193.34  Aligned_cols=217  Identities=13%  Similarity=0.084  Sum_probs=154.2

Q ss_pred             CCCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCCh
Q 016901           77 SKDDNLAFVAGAT--GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (380)
Q Consensus        77 ~~~~~~vlVtGat--G~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~  154 (380)
                      .+++|+|+||||+  |+||+++++.|+++|++|++++|+.+ ..+..+.+...             .+++.++.+|++|.
T Consensus         3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~-------------~~~~~~~~~D~~~~   68 (275)
T 2pd4_A            3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQE-------------LNSPYVYELDVSKE   68 (275)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHH-------------TTCCCEEECCTTCH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHh-------------cCCcEEEEcCCCCH
Confidence            3567899999999  99999999999999999999999875 22222222211             03478899999999


Q ss_pred             hcHHHHhc-------CCCEEEEccccCcc----c------cCCCCCcchhhHHHHHHHHHHHHHcC--CCEEEEEccCCC
Q 016901          155 VQIEPALG-------NASVVICCIGASEK----E------VFDITGPYRIDFQATKNLVDAATIAK--VNHFIMVSSLGT  215 (380)
Q Consensus       155 ~~~~~a~~-------~~d~Vi~~Ag~~~~----~------~~~~~~~~~~nv~g~~~ll~a~~~~~--v~r~V~~SS~~~  215 (380)
                      ++++++++       ++|+||||||....    .      ..++...+++|+.|+.++++++...-  .++||++||.+.
T Consensus        69 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~  148 (275)
T 2pd4_A           69 EHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGS  148 (275)
T ss_dssp             HHHHHHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGG
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchh
Confidence            88887764       68999999996532    1      11233457899999999999997651  258999999765


Q ss_pred             CCCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccc-cce-eeccCCcccCCCCCHH
Q 016901          216 NKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-HNI-TLSQEDTLFGGQVSNL  286 (380)
Q Consensus       216 ~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~-~~~-~~~~~~~~~~~~i~~~  286 (380)
                      ...      ......|+.+|.+.+.+.+       ..|+++++|+||++.++....... ... .........+.+.+++
T Consensus       149 ~~~------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~  222 (275)
T 2pd4_A          149 TKY------MAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLE  222 (275)
T ss_dssp             TSB------CTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHH
T ss_pred             cCC------CCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccccHHHHHHHHhcCCcCCCCCHH
Confidence            321      1234579999999997765       259999999999999885321100 000 0000011223468999


Q ss_pred             HHHHHHHHHHhCC-CCccCcEEEEecCC
Q 016901          287 QVAELLACMAKNR-SLSYCKVVEVIAET  313 (380)
Q Consensus       287 DvA~~i~~~l~~~-~~~~~~~~ni~~~~  313 (380)
                      |+|++++.++... ....|++|++.++.
T Consensus       223 dva~~~~~l~s~~~~~~tG~~~~vdgg~  250 (275)
T 2pd4_A          223 EVGNAGMYLLSSLSSGVSGEVHFVDAGY  250 (275)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            9999999999753 23468889888774

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.90  E-value=4e-23  Score=192.01  Aligned_cols=220  Identities=10%  Similarity=0.112  Sum_probs=157.3

Q ss_pred             CCCCCCCeEEEEcCCCh--HHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCC
Q 016901           75 ADSKDDNLAFVAGATGK--VGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLE  152 (380)
Q Consensus        75 ~~~~~~~~vlVtGatG~--iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~  152 (380)
                      |..+++|+||||||+|+  ||++++++|+++|++|++++|+.  ..+..+.+...             ..++.++.+|++
T Consensus        21 M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~-------------~~~~~~~~~Dl~   85 (280)
T 3nrc_A           21 MGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAE-------------FNPAAVLPCDVI   85 (280)
T ss_dssp             -CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGG-------------GCCSEEEECCTT
T ss_pred             ccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHh-------------cCCceEEEeecC
Confidence            44567899999999966  99999999999999999999987  11222222111             146889999999


Q ss_pred             ChhcHHHHh-------cCCCEEEEccccCcc-----------ccCCCCCcchhhHHHHHHHHHHHHHc---CCCEEEEEc
Q 016901          153 KRVQIEPAL-------GNASVVICCIGASEK-----------EVFDITGPYRIDFQATKNLVDAATIA---KVNHFIMVS  211 (380)
Q Consensus       153 d~~~~~~a~-------~~~d~Vi~~Ag~~~~-----------~~~~~~~~~~~nv~g~~~ll~a~~~~---~v~r~V~~S  211 (380)
                      |.+++++++       +.+|+||||||....           ...++...+++|+.++.++++++...   ..++||++|
T Consensus        86 ~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~is  165 (280)
T 3nrc_A           86 SDQEIKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALT  165 (280)
T ss_dssp             CHHHHHHHHHHHHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEE
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEe
Confidence            998888776       368999999996532           11123345789999999999988643   346999999


Q ss_pred             cCCCCCCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccc--cceeeccCCcccCCC
Q 016901          212 SLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET--HNITLSQEDTLFGGQ  282 (380)
Q Consensus       212 S~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~--~~~~~~~~~~~~~~~  282 (380)
                      |......      ......|+.+|.+.+.+.+       ..|+++++|+||++.++.......  ............+.+
T Consensus       166 S~~~~~~------~~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~  239 (280)
T 3nrc_A          166 YIGAEKA------MPSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPLKKN  239 (280)
T ss_dssp             CGGGTSC------CTTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTHHHHHHHHHHHSTTCSC
T ss_pred             ccccccC------CCCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcchHHHHHHHHhcCCCCCC
Confidence            9766432      1334579999999997765       278999999999999875322110  000000111123457


Q ss_pred             CCHHHHHHHHHHHHhCC-CCccCcEEEEecCCCC
Q 016901          283 VSNLQVAELLACMAKNR-SLSYCKVVEVIAETTA  315 (380)
Q Consensus       283 i~~~DvA~~i~~~l~~~-~~~~~~~~ni~~~~~~  315 (380)
                      .+++|+|++++.++.+. ....|+++++.+|...
T Consensus       240 ~~pedvA~~v~~l~s~~~~~~tG~~i~vdgG~~~  273 (280)
T 3nrc_A          240 VDIMEVGNTVAFLCSDMATGITGEVVHVDAGYHC  273 (280)
T ss_dssp             CCHHHHHHHHHHTTSGGGTTCCSCEEEESTTGGG
T ss_pred             CCHHHHHHHHHHHhCcccCCcCCcEEEECCCccc
Confidence            89999999999998764 3357899999888644

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.90  E-value=5.8e-23  Score=191.13  Aligned_cols=205  Identities=13%  Similarity=0.077  Sum_probs=147.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++|++|||||+|+||++++++|+++|++|++++|+.++.++..+.+...+            ...+.++.+|++|.+++
T Consensus        31 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~------------~~~~~~~~~Dv~d~~~v   98 (281)
T 4dry_A           31 GEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRT------------GNIVRAVVCDVGDPDQV   98 (281)
T ss_dssp             ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH------------SSCEEEEECCTTCHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC------------CCeEEEEEcCCCCHHHH
Confidence            467899999999999999999999999999999999988877776665432            03358999999999888


Q ss_pred             HHHh-------cCCCEEEEccccCcc-c------cCCCCCcchhhHHHHHHHHHHHH----HcC--CCEEEEEccCCCCC
Q 016901          158 EPAL-------GNASVVICCIGASEK-E------VFDITGPYRIDFQATKNLVDAAT----IAK--VNHFIMVSSLGTNK  217 (380)
Q Consensus       158 ~~a~-------~~~d~Vi~~Ag~~~~-~------~~~~~~~~~~nv~g~~~ll~a~~----~~~--v~r~V~~SS~~~~~  217 (380)
                      ++++       +++|+||||||.... .      ..++...+++|+.|+.++++++.    +.+  .++||++||.....
T Consensus        99 ~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~  178 (281)
T 4dry_A           99 AALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQT  178 (281)
T ss_dssp             HHHHHHHHHHHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCC
Confidence            7776       478999999996432 1      11233458899999888777664    333  46999999986643


Q ss_pred             CCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHH
Q 016901          218 FGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAE  290 (380)
Q Consensus       218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~  290 (380)
                      ..      .....|+.+|.+.+.+.+       ..|+++++|+||++.++........ ..........+.+++++|+|+
T Consensus       179 ~~------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~pedvA~  251 (281)
T 4dry_A          179 PR------PNSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMSTG-VLQANGEVAAEPTIPIEHIAE  251 (281)
T ss_dssp             CC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------CE-EECTTSCEEECCCBCHHHHHH
T ss_pred             CC------CCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcch-hhhhhhcccccCCCCHHHHHH
Confidence            21      234579999999997765       2789999999999988743211110 111111122345789999999


Q ss_pred             HHHHHHhCCCC
Q 016901          291 LLACMAKNRSL  301 (380)
Q Consensus       291 ~i~~~l~~~~~  301 (380)
                      +++.++..+..
T Consensus       252 ~v~fL~s~~~~  262 (281)
T 4dry_A          252 AVVYMASLPLS  262 (281)
T ss_dssp             HHHHHHHSCTT
T ss_pred             HHHHHhCCCcc
Confidence            99999998774

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.90  E-value=2.5e-23  Score=192.33  Aligned_cols=208  Identities=14%  Similarity=0.131  Sum_probs=153.4

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ...+|+||||||+|+||++++++|+++|++|++++|+.+...                       ..+..+.+|++|.++
T Consensus        11 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~-----------------------~~~~~~~~Dv~~~~~   67 (269)
T 3vtz_A           11 EFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV-----------------------NVSDHFKIDVTNEEE   67 (269)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT-----------------------TSSEEEECCTTCHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc-----------------------CceeEEEecCCCHHH
Confidence            457899999999999999999999999999999999875421                       457789999999988


Q ss_pred             HHHHhc-------CCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCCC
Q 016901          157 IEPALG-------NASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       157 ~~~a~~-------~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~~  219 (380)
                      +.++++       ++|+||||||.......      ++...+++|+.|+.++++++.    +.+.++||++||...... 
T Consensus        68 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-  146 (269)
T 3vtz_A           68 VKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAA-  146 (269)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSB-
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccC-
Confidence            887763       79999999996533221      223347799999998888764    456679999999876432 


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHHH------CCCCEEEEecCcccCCCcccccc-----------cceeeccCCcccCCC
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKET-----------HNITLSQEDTLFGGQ  282 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~------~g~~~~ivRpg~v~gp~~~~~~~-----------~~~~~~~~~~~~~~~  282 (380)
                           ......|+.+|.+.+.+.+.      .++++++|+||++.++.......           ............+.+
T Consensus       147 -----~~~~~~Y~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~  221 (269)
T 3vtz_A          147 -----TKNAAAYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRI  221 (269)
T ss_dssp             -----CTTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHSTTSSC
T ss_pred             -----CCCChhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCCCCCC
Confidence                 12345799999999988762      38999999999999874211000           000000111223457


Q ss_pred             CCHHHHHHHHHHHHhCCC-CccCcEEEEecCC
Q 016901          283 VSNLQVAELLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       283 i~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      .+++|+|++++.++.+.. ...|++|++.+|.
T Consensus       222 ~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~  253 (269)
T 3vtz_A          222 GRPEEVAEVVAFLASDRSSFITGACLTVDGGL  253 (269)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             cCHHHHHHHHHHHhCCccCCCcCcEEEECCCc
Confidence            899999999999997643 3578999999885

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.90  E-value=4.4e-23  Score=189.96  Aligned_cols=220  Identities=11%  Similarity=0.117  Sum_probs=152.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchh---HHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCC
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR---AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK  153 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d  153 (380)
                      .++++++|||||+|+||++++++|+++|++|+++.|....   .+++.+.+...             ..++.++.+|++|
T Consensus         8 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~Dv~d   74 (262)
T 3ksu_A            8 DLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQ-------------GAKVALYQSDLSN   74 (262)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTT-------------TCEEEEEECCCCS
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhc-------------CCcEEEEECCCCC
Confidence            4577899999999999999999999999999999886543   34444333321             1578999999999


Q ss_pred             hhcHHHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHHHc--CCCEEEEEccCCCCCC
Q 016901          154 RVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKF  218 (380)
Q Consensus       154 ~~~~~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~~~--~v~r~V~~SS~~~~~~  218 (380)
                      .++++++++       ++|+||||||......      .++...+++|+.|+.++++++...  +.+++|++||..... 
T Consensus        75 ~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~-  153 (262)
T 3ksu_A           75 EEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAA-  153 (262)
T ss_dssp             HHHHHHHHHHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHH-
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhcc-
Confidence            988887764       7999999999653322      123344789999999999999764  346899999975421 


Q ss_pred             CCchhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcccc-cccceeeccCCcccCCCCCHHHHHH
Q 016901          219 GFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-ETHNITLSQEDTLFGGQVSNLQVAE  290 (380)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~-~~~~~~~~~~~~~~~~~i~~~DvA~  290 (380)
                           .......|+.+|.+.+.+.+.       .|++++.|+||++.++..... ..............+.+.+++|+|+
T Consensus       154 -----~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~  228 (262)
T 3ksu_A          154 -----YTGFYSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQETKESTAFHKSQAMGNQLTKIEDIAP  228 (262)
T ss_dssp             -----HHCCCCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC------------CCCCSCCGGGTHH
T ss_pred             -----CCCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCchHHHHHHHhcCcccCCCCHHHHHH
Confidence                 112334699999999987762       589999999999987632110 0001111111222345689999999


Q ss_pred             HHHHHHhCCCCccCcEEEEecCCCC
Q 016901          291 LLACMAKNRSLSYCKVVEVIAETTA  315 (380)
Q Consensus       291 ~i~~~l~~~~~~~~~~~ni~~~~~~  315 (380)
                      +++.++.+.....|+++++-++...
T Consensus       229 ~v~~L~s~~~~itG~~i~vdGg~~~  253 (262)
T 3ksu_A          229 IIKFLTTDGWWINGQTIFANGGYTT  253 (262)
T ss_dssp             HHHHHHTTTTTCCSCEEEESTTCCC
T ss_pred             HHHHHcCCCCCccCCEEEECCCccC
Confidence            9999998744467999999888654

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.90  E-value=1.4e-22  Score=188.88  Aligned_cols=209  Identities=10%  Similarity=0.030  Sum_probs=153.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCch-------hHHHHHHHHHhhhhcccccccCCCCCCceEEEEcC
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ-------RAENLVQSVKQMKLDGELANKGIQPVEMLELVECD  150 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  150 (380)
                      ++++++|||||+|+||++++++|+++|++|++++|+.+       ..++..+.+...+             .++.++++|
T Consensus         7 l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~D   73 (285)
T 3sc4_A            7 LRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAG-------------GQALPIVGD   73 (285)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHT-------------SEEEEEECC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcC-------------CcEEEEECC
Confidence            46789999999999999999999999999999999876       3444444444322             679999999


Q ss_pred             CCChhcHHHHhc-------CCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHHHHc----CCCEEEEEccC
Q 016901          151 LEKRVQIEPALG-------NASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAATIA----KVNHFIMVSSL  213 (380)
Q Consensus       151 l~d~~~~~~a~~-------~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~~~~----~v~r~V~~SS~  213 (380)
                      ++|.++++++++       ++|+||||||.......      ++...+++|+.|+.++++++...    +.++||++||.
T Consensus        74 v~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~  153 (285)
T 3sc4_A           74 IRDGDAVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPP  153 (285)
T ss_dssp             TTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCC
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCh
Confidence            999988887764       79999999996533221      22334779999999999988543    56799999997


Q ss_pred             CCCCCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCc-ccCCCcccccccceeeccCCcccCCCCCH
Q 016901          214 GTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGG-MERPTDAYKETHNITLSQEDTLFGGQVSN  285 (380)
Q Consensus       214 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~-v~gp~~~~~~~~~~~~~~~~~~~~~~i~~  285 (380)
                      ......     ......|+.+|.+.+.+.+       ..|++++.|+||+ +..+....       ........+.+.++
T Consensus       154 ~~~~~~-----~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~~~~-------~~~~~~~~~r~~~p  221 (285)
T 3sc4_A          154 IRLEPK-----WLRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQN-------LLGGDEAMARSRKP  221 (285)
T ss_dssp             CCCSGG-----GSCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHHHHH-------HHTSCCCCTTCBCT
T ss_pred             hhccCC-----CCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHHHHh-------hccccccccCCCCH
Confidence            653211     1223579999999998765       2789999999995 54432110       00111123456899


Q ss_pred             HHHHHHHHHHHhCCCCccCcEEEEec
Q 016901          286 LQVAELLACMAKNRSLSYCKVVEVIA  311 (380)
Q Consensus       286 ~DvA~~i~~~l~~~~~~~~~~~ni~~  311 (380)
                      +|+|++++.++.++....|+++.+.+
T Consensus       222 edvA~~~~~l~s~~~~~tG~~i~~dg  247 (285)
T 3sc4_A          222 EVYADAAYVVLNKPSSYTGNTLLCED  247 (285)
T ss_dssp             HHHHHHHHHHHTSCTTCCSCEEEHHH
T ss_pred             HHHHHHHHHHhCCcccccceEEEEcC
Confidence            99999999999887655677665544

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.90  E-value=4.5e-23  Score=188.24  Aligned_cols=217  Identities=12%  Similarity=0.045  Sum_probs=161.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ++++|+++||||+++||+++++.|+++|++|++.+|+.++.++..+++...+             .++..+++|++|+++
T Consensus         6 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g-------------~~~~~~~~Dv~~~~~   72 (255)
T 4g81_D            6 DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKG-------------YDAHGVAFDVTDELA   72 (255)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTT-------------CCEEECCCCTTCHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-------------CcEEEEEeeCCCHHH
Confidence            4689999999999999999999999999999999999998888877776543             578899999999988


Q ss_pred             HHHHh-------cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHH----H-cCCCEEEEEccCCCCCC
Q 016901          157 IEPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----I-AKVNHFIMVSSLGTNKF  218 (380)
Q Consensus       157 ~~~a~-------~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~----~-~~v~r~V~~SS~~~~~~  218 (380)
                      +++++       +++|++|||||......      .++...+++|+.|+..+.+++.    + .+-.+||++||......
T Consensus        73 v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~  152 (255)
T 4g81_D           73 IEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAA  152 (255)
T ss_dssp             HHHHHHHHHHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSB
T ss_pred             HHHHHHHHHHHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCC
Confidence            87765       46999999999653322      2344458899999988877653    2 34569999999866332


Q ss_pred             CCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccc-cccce-eeccCCcccCCCCCHHHHH
Q 016901          219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-ETHNI-TLSQEDTLFGGQVSNLQVA  289 (380)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~-~~~~~-~~~~~~~~~~~~i~~~DvA  289 (380)
                            ......|+.+|.....+.+       .+|++++.|.||++..|..... ..... .........+.+..++|+|
T Consensus       153 ------~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA  226 (255)
T 4g81_D          153 ------RPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQRWGRPEELI  226 (255)
T ss_dssp             ------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCHHHHHHHHHHSTTCSCBCGGGGH
T ss_pred             ------CCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCHHHHHHHHhCCCCCCCcCHHHHH
Confidence                  1233569999999987765       3799999999999988743211 00000 0001112234567899999


Q ss_pred             HHHHHHHhCC-CCccCcEEEEecC
Q 016901          290 ELLACMAKNR-SLSYCKVVEVIAE  312 (380)
Q Consensus       290 ~~i~~~l~~~-~~~~~~~~ni~~~  312 (380)
                      .+++.++.+. .+..|+++.+-+|
T Consensus       227 ~~v~fL~S~~a~~iTG~~i~VDGG  250 (255)
T 4g81_D          227 GTAIFLSSKASDYINGQIIYVDGG  250 (255)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHhCchhCCCcCCEEEECCC
Confidence            9999998654 3457888888766

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.90  E-value=3e-23  Score=189.95  Aligned_cols=213  Identities=15%  Similarity=0.065  Sum_probs=149.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCCh-h
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFR-VRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR-V  155 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~-V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~-~  155 (380)
                      +++|+|+||||+|+||++++++|+++|++ |++++|+... +. .+.+....           ...++.++.+|++|. +
T Consensus         3 l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~-~~-~~~l~~~~-----------~~~~~~~~~~D~~~~~~   69 (254)
T 1sby_A            3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP-TA-LAELKAIN-----------PKVNITFHTYDVTVPVA   69 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH-HH-HHHHHHHC-----------TTSEEEEEECCTTSCHH
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH-HH-HHHHHHhC-----------CCceEEEEEEecCCChH
Confidence            46789999999999999999999999996 9999998742 11 11121110           014788999999998 7


Q ss_pred             cHHHHhc-------CCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHc----C---CCEEEEEccCCCCCCCCc
Q 016901          156 QIEPALG-------NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA----K---VNHFIMVSSLGTNKFGFP  221 (380)
Q Consensus       156 ~~~~a~~-------~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~----~---v~r~V~~SS~~~~~~~~~  221 (380)
                      +++++++       ++|+||||||...  ..++...+++|+.|+.++++++...    +   .++||++||.......  
T Consensus        70 ~~~~~~~~~~~~~g~id~lv~~Ag~~~--~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--  145 (254)
T 1sby_A           70 ESKKLLKKIFDQLKTVDILINGAGILD--DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAI--  145 (254)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCC--TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC--
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCccCC--HHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCC--
Confidence            7776663       7999999999642  2344556899999999999988632    1   3589999998764321  


Q ss_pred             hhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCccccccc-c-eeeccCCcccCCCCCHHHHHHHH
Q 016901          222 AAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETH-N-ITLSQEDTLFGGQVSNLQVAELL  292 (380)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~~~-~-~~~~~~~~~~~~~i~~~DvA~~i  292 (380)
                          .....|+.+|.+.+.+.+.       .|+++++|+||++.++........ . ..............+++|+|+++
T Consensus       146 ----~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~i  221 (254)
T 1sby_A          146 ----HQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNF  221 (254)
T ss_dssp             ----TTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCCEEHHHHHHHH
T ss_pred             ----CCchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHHhcCCCCCHHHHHHHH
Confidence                2345799999999977652       689999999999988742110000 0 00000000001235899999999


Q ss_pred             HHHHhCCCCccCcEEEEecCC
Q 016901          293 ACMAKNRSLSYCKVVEVIAET  313 (380)
Q Consensus       293 ~~~l~~~~~~~~~~~ni~~~~  313 (380)
                      +.++...  ..+++|++.+|.
T Consensus       222 ~~~~~~~--~~G~~~~v~gG~  240 (254)
T 1sby_A          222 VKAIEAN--KNGAIWKLDLGT  240 (254)
T ss_dssp             HHHHHHC--CTTCEEEEETTE
T ss_pred             HHHHHcC--CCCCEEEEeCCc
Confidence            9998743  458899998874

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.90  E-value=7.6e-22  Score=179.30  Aligned_cols=205  Identities=10%  Similarity=0.057  Sum_probs=153.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      +|+||||||+++||+++++.|++.|++|++.+|++++..++.+             .    ..++.++++|++|++++++
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~-------------~----~~~~~~~~~Dv~~~~~v~~   64 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAK-------------E----RPNLFYFHGDVADPLTLKK   64 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHT-------------T----CTTEEEEECCTTSHHHHHH
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-------------h----cCCEEEEEecCCCHHHHHH
Confidence            4899999999999999999999999999999999877665432             1    1578899999999988777


Q ss_pred             Hh-------cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCCCCch
Q 016901          160 AL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFPA  222 (380)
Q Consensus       160 a~-------~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~~~~~  222 (380)
                      ++       +++|++|||||......      .++...+++|+.|+..+.+++.    +.+ .++|++||.......   
T Consensus        65 ~v~~~~~~~g~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-G~IInisS~~~~~~~---  140 (247)
T 3ged_A           65 FVEYAMEKLQRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNK-GRIINIASTRAFQSE---  140 (247)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGTSCC---
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CcEEEEeecccccCC---
Confidence            65       57999999999653322      2344458899999988877663    344 799999998664321   


Q ss_pred             hhhchhhHHHHHHHHHHHHHH------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHHHH
Q 016901          223 AILNLFWGVLLWKRKAEEALI------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMA  296 (380)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l  296 (380)
                         .....|+.+|.....+.+      ..|++++.|.||++..+........    .......+.+..++|+|.+++.++
T Consensus       141 ---~~~~~Y~asKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~~~~~~~----~~~~~Pl~R~g~pediA~~v~fL~  213 (247)
T 3ged_A          141 ---PDSEAYASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQEFTQE----DCAAIPAGKVGTPKDISNMVLFLC  213 (247)
T ss_dssp             ---TTCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC---CCHH----HHHTSTTSSCBCHHHHHHHHHHHH
T ss_pred             ---CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCcHHHHHH----HHhcCCCCCCcCHHHHHHHHHHHH
Confidence               223579999999987765      2589999999999987643211100    011122345679999999999999


Q ss_pred             hCCCCccCcEEEEecCC
Q 016901          297 KNRSLSYCKVVEVIAET  313 (380)
Q Consensus       297 ~~~~~~~~~~~ni~~~~  313 (380)
                      .+ .+..|+++.+-+|-
T Consensus       214 s~-~~iTG~~i~VDGG~  229 (247)
T 3ged_A          214 QQ-DFITGETIIVDGGM  229 (247)
T ss_dssp             HC-SSCCSCEEEESTTG
T ss_pred             hC-CCCCCCeEEECcCH
Confidence            85 45789999988874

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.90  E-value=1.4e-22  Score=186.60  Aligned_cols=200  Identities=13%  Similarity=0.097  Sum_probs=149.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCC---CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCCh
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLG---FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G---~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~  154 (380)
                      +++++||||||+|+||++++++|+++|   ++|++++|+.++.+.+.+ +...             ..++.++.+|++|.
T Consensus        19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~-l~~~-------------~~~~~~~~~Dl~~~   84 (267)
T 1sny_A           19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELED-LAKN-------------HSNIHILEIDLRNF   84 (267)
T ss_dssp             -CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHH-HHHH-------------CTTEEEEECCTTCG
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHH-hhcc-------------CCceEEEEecCCCh
Confidence            467899999999999999999999999   999999999876554432 2111             15799999999999


Q ss_pred             hcHHHHhc---------CCCEEEEccccCc-ccc------CCCCCcchhhHHHHHHHHHHHHHc----------C-----
Q 016901          155 VQIEPALG---------NASVVICCIGASE-KEV------FDITGPYRIDFQATKNLVDAATIA----------K-----  203 (380)
Q Consensus       155 ~~~~~a~~---------~~d~Vi~~Ag~~~-~~~------~~~~~~~~~nv~g~~~ll~a~~~~----------~-----  203 (380)
                      ++++++++         ++|+||||||... ...      .++...+++|+.++.++++++...          +     
T Consensus        85 ~~v~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~  164 (267)
T 1sny_A           85 DAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVG  164 (267)
T ss_dssp             GGHHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTT
T ss_pred             HHHHHHHHHHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCC
Confidence            99888875         7999999999654 111      122334789999999999887543          2     


Q ss_pred             CCEEEEEccCCCCCCCCchhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcccccccceeeccCC
Q 016901          204 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQED  276 (380)
Q Consensus       204 v~r~V~~SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~  276 (380)
                      .++||++||........   ...+...|+.+|.+.+.+++.       .|+++++||||++.++....            
T Consensus       165 ~~~iv~isS~~~~~~~~---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~------------  229 (267)
T 1sny_A          165 RAAIINMSSILGSIQGN---TDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS------------  229 (267)
T ss_dssp             TCEEEEECCGGGCSTTC---CSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT------------
T ss_pred             CceEEEEecccccccCC---CCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC------------
Confidence            47899999976643211   112345799999999987652       68999999999998764210            


Q ss_pred             cccCCCCCHHHHHHHHHHHHhCCCC-ccCcEEEE
Q 016901          277 TLFGGQVSNLQVAELLACMAKNRSL-SYCKVVEV  309 (380)
Q Consensus       277 ~~~~~~i~~~DvA~~i~~~l~~~~~-~~~~~~ni  309 (380)
                         ..+++++|+|+.++.++..... ..+..|++
T Consensus       230 ---~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~  260 (267)
T 1sny_A          230 ---SAPLDVPTSTGQIVQTISKLGEKQNGGFVNY  260 (267)
T ss_dssp             ---TCSBCHHHHHHHHHHHHHHCCGGGTTCEECT
T ss_pred             ---CCCCCHHHHHHHHHHHHHhcCcCCCCcEEcc
Confidence               1468999999999999986532 34555544

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.90  E-value=9.8e-23  Score=186.31  Aligned_cols=199  Identities=14%  Similarity=0.096  Sum_probs=148.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      ++++++|||||+|+||++++++|+++|++|++++|+.++.++..+.+.....          ...++.++.+|++|.+++
T Consensus         5 ~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~----------~~~~~~~~~~Dv~~~~~v   74 (250)
T 3nyw_A            5 KQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNK----------HVQEPIVLPLDITDCTKA   74 (250)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCT----------TSCCCEEEECCTTCHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcc----------ccCcceEEeccCCCHHHH
Confidence            4678999999999999999999999999999999999888877776654310          115688999999999888


Q ss_pred             HHHh-------cCCCEEEEccccCccccC-----CCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCCCCc
Q 016901          158 EPAL-------GNASVVICCIGASEKEVF-----DITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGFP  221 (380)
Q Consensus       158 ~~a~-------~~~d~Vi~~Ag~~~~~~~-----~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~~~~  221 (380)
                      ++++       +++|+||||||.......     ++...+++|+.|+.++++++    ++.+.++||++||.......  
T Consensus        75 ~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~--  152 (250)
T 3nyw_A           75 DTEIKDIHQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGF--  152 (250)
T ss_dssp             HHHHHHHHHHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC---------
T ss_pred             HHHHHHHHHhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCC--
Confidence            7776       479999999996533221     22344789999999988887    44566799999997664321  


Q ss_pred             hhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHH
Q 016901          222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLAC  294 (380)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~  294 (380)
                          .+...|+.+|.+.+.+.+       ..|++++.|+||++.++......        .......+++++|+|++++.
T Consensus       153 ----~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~--------~~~~~~~~~~p~dva~~v~~  220 (250)
T 3nyw_A          153 ----ADGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKKAG--------TPFKDEEMIQPDDLLNTIRC  220 (250)
T ss_dssp             ----CCTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHTT--------CCSCGGGSBCHHHHHHHHHH
T ss_pred             ----CCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhhhcC--------CCcccccCCCHHHHHHHHHH
Confidence                124579999999987765       26899999999999876321100        01112357899999999999


Q ss_pred             HHhCCC
Q 016901          295 MAKNRS  300 (380)
Q Consensus       295 ~l~~~~  300 (380)
                      ++..+.
T Consensus       221 l~s~~~  226 (250)
T 3nyw_A          221 LLNLSE  226 (250)
T ss_dssp             HHTSCT
T ss_pred             HHcCCC
Confidence            998765

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.90  E-value=3.5e-23  Score=189.58  Aligned_cols=207  Identities=13%  Similarity=0.142  Sum_probs=143.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      +|+||||||+|+||++++++|+++|++|++++|+.++..                       .  . +.+|++|.+++++
T Consensus         1 mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-----------------------~--~-~~~Dl~~~~~v~~   54 (257)
T 1fjh_A            1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVI-----------------------A--D-LSTAEGRKQAIAD   54 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE-----------------------C--C-TTSHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhc-----------------------c--c-cccCCCCHHHHHH
Confidence            368999999999999999999999999999999875321                       1  1 5689999999988


Q ss_pred             Hhc----CCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCCCC-----c-----
Q 016901          160 ALG----NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF-----P-----  221 (380)
Q Consensus       160 a~~----~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~~~-----~-----  221 (380)
                      +++    ++|+||||||.... ...+...+++|+.|+.++++++.    +.+.++||++||........     .     
T Consensus        55 ~~~~~~~~id~lv~~Ag~~~~-~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~  133 (257)
T 1fjh_A           55 VLAKCSKGMDGLVLCAGLGPQ-TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEA  133 (257)
T ss_dssp             HHTTCTTCCSEEEECCCCCTT-CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHH
T ss_pred             HHHHhCCCCCEEEECCCCCCC-cccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcc
Confidence            875    46999999996531 12345568999999999988875    45668999999987641100     0     


Q ss_pred             ---h---------hhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccc-cccc-eeeccC-Cccc
Q 016901          222 ---A---------AILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-ETHN-ITLSQE-DTLF  279 (380)
Q Consensus       222 ---~---------~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~-~~~~-~~~~~~-~~~~  279 (380)
                         .         ........|+.+|.+.+.+++       ..|+++++|+||.+.++..... .... ...... ....
T Consensus       134 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~  213 (257)
T 1fjh_A          134 GEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPM  213 (257)
T ss_dssp             TCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CCCST
T ss_pred             cchhhhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccchhHHHHHHhccccc
Confidence               0         112245679999999998775       2689999999999998753211 0000 000000 1123


Q ss_pred             CCCCCHHHHHHHHHHHHhCCC-CccCcEEEEecCC
Q 016901          280 GGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       280 ~~~i~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      +.+++++|+|++++.++.++. ...|++|++.++.
T Consensus       214 ~~~~~~~dvA~~~~~l~~~~~~~~tG~~~~vdgG~  248 (257)
T 1fjh_A          214 GRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGI  248 (257)
T ss_dssp             TSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTTH
T ss_pred             CCCCCHHHHHHHHHHHhCchhcCCcCCEEEECCCc
Confidence            357899999999999997653 3468889888774

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.90  E-value=1.9e-22  Score=181.87  Aligned_cols=191  Identities=14%  Similarity=0.078  Sum_probs=139.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      ||+||||||+|+||++++++|+++|++|++++|+.++.+++.+.+                ..++.++.+|++|.+++++
T Consensus         1 Mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----------------~~~~~~~~~D~~~~~~v~~   64 (230)
T 3guy_A            1 MSLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL----------------SNNVGYRARDLASHQEVEQ   64 (230)
T ss_dssp             --CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC----------------SSCCCEEECCTTCHHHHHH
T ss_pred             CCEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH----------------hhccCeEeecCCCHHHHHH
Confidence            367999999999999999999999999999999988776654422                1578899999999999999


Q ss_pred             HhcCC----CEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHHHcC---CCEEEEEccCCCCCCCCchhhhc
Q 016901          160 ALGNA----SVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIAK---VNHFIMVSSLGTNKFGFPAAILN  226 (380)
Q Consensus       160 a~~~~----d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~~~~---v~r~V~~SS~~~~~~~~~~~~~~  226 (380)
                      +++.+    |+||||||......      .++...+++|+.|+.++++++...-   ..+||++||......      ..
T Consensus        65 ~~~~~~~~~d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~------~~  138 (230)
T 3guy_A           65 LFEQLDSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQP------KA  138 (230)
T ss_dssp             HHHSCSSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSC------CT
T ss_pred             HHHHHhhcCCEEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCC------CC
Confidence            88654    99999999653222      1233447899999999999876432   228999999766432      12


Q ss_pred             hhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHHHHhCC
Q 016901          227 LFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNR  299 (380)
Q Consensus       227 ~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~  299 (380)
                      ....|+.+|.+.+.+.+.       .|++++.|+||.+.++......        .....+.+++++|+|++++.++.++
T Consensus       139 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--------~~~~~~~~~~~~dvA~~i~~l~~~~  210 (230)
T 3guy_A          139 QESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWETSG--------KSLDTSSFMSAEDAALMIHGALANI  210 (230)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC------------------------CCCHHHHHHHHHHHCCEE
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHHhcC--------CCCCcccCCCHHHHHHHHHHHHhCc
Confidence            345799999999987652       5899999999999876321100        1112345789999999999998765


Q ss_pred             C
Q 016901          300 S  300 (380)
Q Consensus       300 ~  300 (380)
                      .
T Consensus       211 ~  211 (230)
T 3guy_A          211 G  211 (230)
T ss_dssp             T
T ss_pred             C
Confidence            4

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.89  E-value=1.5e-22  Score=186.12  Aligned_cols=212  Identities=15%  Similarity=0.142  Sum_probs=146.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      ++++++|||||+|+||++++++|+++|++|++++|+.++.+.+.+.+...+             .++.++.+|++|.+++
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~Dv~~~~~v   69 (260)
T 2qq5_A            3 MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLG-------------GQCVPVVCDSSQESEV   69 (260)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHS-------------SEEEEEECCTTSHHHH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcC-------------CceEEEECCCCCHHHH
Confidence            467899999999999999999999999999999999887777666554321             5788999999999877


Q ss_pred             HHHh--------cCCCEEEEcccc--C------cccc-----CCCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEcc
Q 016901          158 EPAL--------GNASVVICCIGA--S------EKEV-----FDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSS  212 (380)
Q Consensus       158 ~~a~--------~~~d~Vi~~Ag~--~------~~~~-----~~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS  212 (380)
                      ++++        +.+|+||||||.  .      ....     .++...+++|+.++.++.+++.    +.+.++||++||
T Consensus        70 ~~~~~~~~~~~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS  149 (260)
T 2qq5_A           70 RSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISS  149 (260)
T ss_dssp             HHHHHHHHHHHTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECC
T ss_pred             HHHHHHHHHhcCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcC
Confidence            6654        468999999952  1      1111     1122346789988877766553    556789999999


Q ss_pred             CCCCCCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccc-ccccee----eccCCcccC
Q 016901          213 LGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-ETHNIT----LSQEDTLFG  280 (380)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~-~~~~~~----~~~~~~~~~  280 (380)
                      ......       .+...|+.+|.+.+.+.+       .+|+++++|+||++.++..... ......    ........+
T Consensus       150 ~~~~~~-------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (260)
T 2qq5_A          150 PGSLQY-------MFNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFS  222 (260)
T ss_dssp             GGGTSC-------CSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC----------------------C
T ss_pred             hhhcCC-------CCCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccccccchhHHHHHHhhhc
Confidence            876432       123579999999998765       2699999999999988742110 000000    000001111


Q ss_pred             CCCCHHHHHHHHHHHHhCCC--CccCcEEEE
Q 016901          281 GQVSNLQVAELLACMAKNRS--LSYCKVVEV  309 (380)
Q Consensus       281 ~~i~~~DvA~~i~~~l~~~~--~~~~~~~ni  309 (380)
                      ....++|+|++++.++.++.  ...|+++.+
T Consensus       223 ~~~~pe~va~~v~~l~s~~~~~~itG~~i~~  253 (260)
T 2qq5_A          223 SAETTELSGKCVVALATDPNILSLSGKVLPS  253 (260)
T ss_dssp             HHHHHHHHHHHHHHHHTCTTGGGGTTCEEEH
T ss_pred             cCCCHHHHHHHHHHHhcCcccccccceeech
Confidence            23578999999999998764  235666543

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.89  E-value=6.5e-23  Score=186.68  Aligned_cols=206  Identities=13%  Similarity=0.081  Sum_probs=152.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHH-CCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLK-LGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~-~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      ++|++|||||+|+||++++++|++ .|++|+++.|+.+..                       ...+.++.+|++|.+++
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~-----------------------~~~~~~~~~Dv~~~~~v   59 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS-----------------------AENLKFIKADLTKQQDI   59 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC-----------------------CTTEEEEECCTTCHHHH
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc-----------------------cccceEEecCcCCHHHH
Confidence            568999999999999999999999 789999998876411                       15688999999999999


Q ss_pred             HHHhc-----CCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHHHHcCC--CEEEEEccCCCCCCCCchhh
Q 016901          158 EPALG-----NASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAATIAKV--NHFIMVSSLGTNKFGFPAAI  224 (380)
Q Consensus       158 ~~a~~-----~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~~~~~v--~r~V~~SS~~~~~~~~~~~~  224 (380)
                      +++++     ++|+||||||.......      ++...+++|+.|+.++++++...-.  ++||++||.......     
T Consensus        60 ~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----  134 (244)
T 4e4y_A           60 TNVLDIIKNVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAK-----  134 (244)
T ss_dssp             HHHHHHTTTCCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCC-----
T ss_pred             HHHHHHHHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCC-----
Confidence            88875     78999999997533211      2334478999999999999875432  489999998664321     


Q ss_pred             hchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccccccc-----------ceeeccCCcccCCCCCHH
Q 016901          225 LNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH-----------NITLSQEDTLFGGQVSNL  286 (380)
Q Consensus       225 ~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~-----------~~~~~~~~~~~~~~i~~~  286 (380)
                       .....|+.+|.+.+.+.+       .+|+++++|+||++.+|........           ...........+.+.+++
T Consensus       135 -~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~  213 (244)
T 4e4y_A          135 -PNSFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQ  213 (244)
T ss_dssp             -TTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTSTTSSCBCHH
T ss_pred             -CCCchhHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCCCCCCcCHH
Confidence             234579999999998765       3689999999999988742110000           000011122234578999


Q ss_pred             HHHHHHHHHHhCCC-CccCcEEEEecCC
Q 016901          287 QVAELLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       287 DvA~~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      |+|++++.++.+.. ...|+++++.+|.
T Consensus       214 dvA~~v~~l~s~~~~~itG~~i~vdGG~  241 (244)
T 4e4y_A          214 EIAELVIFLLSDKSKFMTGGLIPIDGGY  241 (244)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHHhcCccccccCCeEeECCCc
Confidence            99999999997643 3468999988874

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.89  E-value=6.6e-23  Score=185.24  Aligned_cols=210  Identities=13%  Similarity=0.074  Sum_probs=152.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ..++|++|||||+++||+++++.|++.|++|++.+|+.+..+..                   ...++..+.+|++|+++
T Consensus         8 lf~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~-------------------~~~~~~~~~~Dv~~~~~   68 (242)
T 4b79_A            8 IYAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAP-------------------RHPRIRREELDITDSQR   68 (242)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSC-------------------CCTTEEEEECCTTCHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhh-------------------hcCCeEEEEecCCCHHH
Confidence            34789999999999999999999999999999999987654321                   12678999999999988


Q ss_pred             HHHHh---cCCCEEEEccccCccc----cCCCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCCCCchhhh
Q 016901          157 IEPAL---GNASVVICCIGASEKE----VFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFPAAIL  225 (380)
Q Consensus       157 ~~~a~---~~~d~Vi~~Ag~~~~~----~~~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~~~~~~~~  225 (380)
                      +++++   +++|++|||||.....    ..++...+++|+.|+..+.+++.    +.+ .+||++||.......      
T Consensus        69 v~~~~~~~g~iDiLVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~~~~------  141 (242)
T 4b79_A           69 LQRLFEALPRLDVLVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRG-GSILNIASMYSTFGS------  141 (242)
T ss_dssp             HHHHHHHCSCCSEEEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-EEEEEECCGGGTSCC------
T ss_pred             HHHHHHhcCCCCEEEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEeeccccCCC------
Confidence            88776   5799999999965321    12344458899999888877653    334 699999998653321      


Q ss_pred             chhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccc--cceeeccCCcccCCCCCHHHHHHHHHHHH
Q 016901          226 NLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET--HNITLSQEDTLFGGQVSNLQVAELLACMA  296 (380)
Q Consensus       226 ~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~--~~~~~~~~~~~~~~~i~~~DvA~~i~~~l  296 (380)
                      .....|+.+|.....+.+       .+|++++.|.||++..|.......  ............+.+..++|+|.+++.++
T Consensus       142 ~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~fLa  221 (242)
T 4b79_A          142 ADRPAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLARWGEAPEVASAAAFLC  221 (242)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence            223579999999997765       379999999999998874221100  00000011123345678999999999998


Q ss_pred             hCCC-CccCcEEEEecC
Q 016901          297 KNRS-LSYCKVVEVIAE  312 (380)
Q Consensus       297 ~~~~-~~~~~~~ni~~~  312 (380)
                      .+.. +..|+++.+-+|
T Consensus       222 Sd~a~~iTG~~l~VDGG  238 (242)
T 4b79_A          222 GPGASFVTGAVLAVDGG  238 (242)
T ss_dssp             SGGGTTCCSCEEEESTT
T ss_pred             CchhcCccCceEEECcc
Confidence            7543 357888888766

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.89  E-value=2.9e-22  Score=183.54  Aligned_cols=213  Identities=15%  Similarity=0.076  Sum_probs=145.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH--
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI--  157 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~--  157 (380)
                      ||++|||||+|+||++++++|+++|++|++++|+.++.+.+.+ +...+             .++..+  |..+.+.+  
T Consensus         1 Mk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~~-------------~~~~~~--d~~~v~~~~~   64 (254)
T 1zmt_A            1 MSTAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAETY-------------PQLKPM--SEQEPAELIE   64 (254)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHHC-------------TTSEEC--CCCSHHHHHH
T ss_pred             CeEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhcC-------------CcEEEE--CHHHHHHHHH
Confidence            3689999999999999999999999999999999887666544 33221             234433  44332221  


Q ss_pred             --HHHhcCCCEEEEccccC-cccc------CCCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCCCCchhh
Q 016901          158 --EPALGNASVVICCIGAS-EKEV------FDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFPAAI  224 (380)
Q Consensus       158 --~~a~~~~d~Vi~~Ag~~-~~~~------~~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~~~~~~~  224 (380)
                        .+.++++|+||||||.. ....      .++...+++|+.|+.++++++.    +.+.++||++||.......     
T Consensus        65 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----  139 (254)
T 1zmt_A           65 AVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPW-----  139 (254)
T ss_dssp             HHHHHHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCC-----
T ss_pred             HHHHHhCCCCEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCC-----
Confidence              12235899999999965 2211      1233457899999999888774    4566799999998664321     


Q ss_pred             hchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccccccccee------e--ccCCcccCCCCCHHHHH
Q 016901          225 LNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNIT------L--SQEDTLFGGQVSNLQVA  289 (380)
Q Consensus       225 ~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~------~--~~~~~~~~~~i~~~DvA  289 (380)
                       .....|+.+|.+.+.+.+       ..|+++++|+||+++||...........      .  .......+.+.+++|+|
T Consensus       140 -~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~~~p~~~~~~p~dvA  218 (254)
T 1zmt_A          140 -KELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELG  218 (254)
T ss_dssp             -TTCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHHHH
T ss_pred             -CCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccChHHHHHHhccCCCCCCcCHHHHH
Confidence             234579999999997765       2689999999999977642111000000      0  00011223568999999


Q ss_pred             HHHHHHHhCCC-CccCcEEEEecCCC
Q 016901          290 ELLACMAKNRS-LSYCKVVEVIAETT  314 (380)
Q Consensus       290 ~~i~~~l~~~~-~~~~~~~ni~~~~~  314 (380)
                      ++++.++.+.. ...|+++++.++..
T Consensus       219 ~~v~~l~s~~~~~~tG~~~~vdgG~~  244 (254)
T 1zmt_A          219 ELVAFLASGSCDYLTGQVFWLAGGFP  244 (254)
T ss_dssp             HHHHHHHTTSCGGGTTCEEEESTTCC
T ss_pred             HHHHHHhCcccCCccCCEEEECCCch
Confidence            99999998653 34688999888753

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.89  E-value=8.8e-23  Score=186.69  Aligned_cols=198  Identities=12%  Similarity=0.082  Sum_probs=149.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ++|+||||||+|+||++++++|+++|++|++++|+.++.                         ....+.+|++|.++++
T Consensus        21 m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~-------------------------~~~~~~~d~~d~~~v~   75 (251)
T 3orf_A           21 MSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPN-------------------------ADHSFTIKDSGEEEIK   75 (251)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT-------------------------SSEEEECSCSSHHHHH
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc-------------------------cccceEEEeCCHHHHH
Confidence            568999999999999999999999999999999987542                         2235788999998888


Q ss_pred             HHhc-------CCCEEEEccccCcccc-------CCCCCcchhhHHHHHHHHHHHHHcC--CCEEEEEccCCCCCCCCch
Q 016901          159 PALG-------NASVVICCIGASEKEV-------FDITGPYRIDFQATKNLVDAATIAK--VNHFIMVSSLGTNKFGFPA  222 (380)
Q Consensus       159 ~a~~-------~~d~Vi~~Ag~~~~~~-------~~~~~~~~~nv~g~~~ll~a~~~~~--v~r~V~~SS~~~~~~~~~~  222 (380)
                      ++++       ++|+||||||......       .++...+++|+.|+.++++++...-  -++||++||......    
T Consensus        76 ~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~----  151 (251)
T 3orf_A           76 SVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNR----  151 (251)
T ss_dssp             HHHHHHHTTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC----
T ss_pred             HHHHHHHHHcCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccC----
Confidence            7763       5799999999643221       1233447899999999999987642  248999999766432    


Q ss_pred             hhhchhhHHHHHHHHHHHHHH----H-----CCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHH
Q 016901          223 AILNLFWGVLLWKRKAEEALI----A-----SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA  293 (380)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~----~-----~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~  293 (380)
                        ......|+.+|.+.+.+++    +     .|+++++|+||++.++.....        ........+++++|+|++++
T Consensus       152 --~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~~~--------~~~~~~~~~~~~~dva~~i~  221 (251)
T 3orf_A          152 --TSGMIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTNRKY--------MSDANFDDWTPLSEVAEKLF  221 (251)
T ss_dssp             --CTTBHHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHHHHH--------CTTSCGGGSBCHHHHHHHHH
T ss_pred             --CCCCchhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcchhhh--------cccccccccCCHHHHHHHHH
Confidence              1334579999999998876    2     579999999999987632110        01112345789999999999


Q ss_pred             HHHhC-C-CCccCcEEEEecCCCC
Q 016901          294 CMAKN-R-SLSYCKVVEVIAETTA  315 (380)
Q Consensus       294 ~~l~~-~-~~~~~~~~ni~~~~~~  315 (380)
                      .++.+ . ....|+++++.+++..
T Consensus       222 ~l~~~~~~~~~tG~~i~v~~g~~~  245 (251)
T 3orf_A          222 EWSTNSDSRPTNGSLVKFETKSKV  245 (251)
T ss_dssp             HHHHCGGGCCCTTCEEEEEEETTE
T ss_pred             HHhcCccccCCcceEEEEecCCcc
Confidence            99988 2 2356899999887654

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.89  E-value=2e-22  Score=183.50  Aligned_cols=207  Identities=13%  Similarity=0.042  Sum_probs=152.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCC--CCh
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDL--EKR  154 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl--~d~  154 (380)
                      .+++++++||||+|+||++++++|+++|++|++++|+.++.+++.+.++..+            ..++.++.+|+  +|.
T Consensus        11 ~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------------~~~~~~~~~d~d~~~~   78 (247)
T 3i1j_A           11 LLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAG------------QPQPLIIALNLENATA   78 (247)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------------SCCCEEEECCTTTCCH
T ss_pred             cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcC------------CCCceEEEeccccCCH
Confidence            4578999999999999999999999999999999999988888777665432            14577778877  888


Q ss_pred             hcHHHHh-------cCCCEEEEccccCccc-------cCCCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCC
Q 016901          155 VQIEPAL-------GNASVVICCIGASEKE-------VFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTN  216 (380)
Q Consensus       155 ~~~~~a~-------~~~d~Vi~~Ag~~~~~-------~~~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~  216 (380)
                      +++.+++       +++|+||||||.....       ..++...+++|+.|+.++++++    ++.+.++||++||....
T Consensus        79 ~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~  158 (247)
T 3i1j_A           79 QQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGR  158 (247)
T ss_dssp             HHHHHHHHHHHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGT
T ss_pred             HHHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhc
Confidence            7777665       4799999999964211       1123345789999999999887    44556799999997653


Q ss_pred             CCCCchhhhchhhHHHHHHHHHHHHHH-------H-CCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHH
Q 016901          217 KFGFPAAILNLFWGVLLWKRKAEEALI-------A-SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQV  288 (380)
Q Consensus       217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~-~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~Dv  288 (380)
                      ...      .....|+.+|.+.+.+.+       . .|++++.|+||++.++.....      ...  .....+.+++|+
T Consensus       159 ~~~------~~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~~~~------~~~--~~~~~~~~p~dv  224 (247)
T 3i1j_A          159 KGR------ANWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMRAQA------YPD--ENPLNNPAPEDI  224 (247)
T ss_dssp             SCC------TTCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHHHHH------STT--SCGGGSCCGGGG
T ss_pred             CCC------CCcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccchhc------ccc--cCccCCCCHHHH
Confidence            321      234579999999997765       2 589999999999987632100      001  111245789999


Q ss_pred             HHHHHHHHhCCC-CccCcEEEE
Q 016901          289 AELLACMAKNRS-LSYCKVVEV  309 (380)
Q Consensus       289 A~~i~~~l~~~~-~~~~~~~ni  309 (380)
                      |++++.++.+.. ...|+++++
T Consensus       225 a~~~~~l~s~~~~~itG~~i~~  246 (247)
T 3i1j_A          225 MPVYLYLMGPDSTGINGQALNA  246 (247)
T ss_dssp             THHHHHHHSGGGTTCCSCEEEC
T ss_pred             HHHHHHHhCchhccccCeeecC
Confidence            999999997543 345776654

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.89  E-value=6.2e-23  Score=185.83  Aligned_cols=199  Identities=14%  Similarity=0.061  Sum_probs=147.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ++|+||||||+|+||++++++|+++|++|++++|++++..                       ....++.+|++|.++++
T Consensus         2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-----------------------~~~~~~~~D~~~~~~~~   58 (236)
T 1ooe_A            2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA-----------------------DSNILVDGNKNWTEQEQ   58 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS-----------------------SEEEECCTTSCHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc-----------------------cccEEEeCCCCCHHHHH
Confidence            4678999999999999999999999999999999875421                       24667889999998887


Q ss_pred             HHhc---------CCCEEEEccccCccccC-------CCCCcchhhHHHHHHHHHHHHHcC--CCEEEEEccCCCCCCCC
Q 016901          159 PALG---------NASVVICCIGASEKEVF-------DITGPYRIDFQATKNLVDAATIAK--VNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       159 ~a~~---------~~d~Vi~~Ag~~~~~~~-------~~~~~~~~nv~g~~~ll~a~~~~~--v~r~V~~SS~~~~~~~~  220 (380)
                      ++++         ++|+||||||.......       ++...+++|+.|+.++++++...-  .++||++||......  
T Consensus        59 ~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~--  136 (236)
T 1ooe_A           59 SILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGP--  136 (236)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC--
T ss_pred             HHHHHHHHHhCCCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccC--
Confidence            7663         79999999996532211       223447899999999999987632  258999999866432  


Q ss_pred             chhhhchhhHHHHHHHHHHHHHHH---------CCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHH
Q 016901          221 PAAILNLFWGVLLWKRKAEEALIA---------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAEL  291 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~---------~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~  291 (380)
                          ......|+.+|.+.+.+.+.         .|+++++|+||++.++......      .  ......+++++|+|++
T Consensus       137 ----~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~------~--~~~~~~~~~~~dvA~~  204 (236)
T 1ooe_A          137 ----TPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWM------P--NADHSSWTPLSFISEH  204 (236)
T ss_dssp             ----CTTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHS------T--TCCGGGCBCHHHHHHH
T ss_pred             ----CCCcHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchhhcC------C--CccccccCCHHHHHHH
Confidence                12345799999999988752         3599999999999887321100      0  0112346889999999


Q ss_pred             HHHHHhCCC--CccCcEEEEecCCC
Q 016901          292 LACMAKNRS--LSYCKVVEVIAETT  314 (380)
Q Consensus       292 i~~~l~~~~--~~~~~~~ni~~~~~  314 (380)
                      ++.++..+.  ...|+.+++.++..
T Consensus       205 i~~~l~s~~~~~~~G~~~~v~gg~~  229 (236)
T 1ooe_A          205 LLKWTTETSSRPSSGALLKITTENG  229 (236)
T ss_dssp             HHHHHHCGGGCCCTTCEEEEEEETT
T ss_pred             HHHHHcCCCcccccccEEEEecCCC
Confidence            997774332  24588888887653

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.88  E-value=1.5e-21  Score=186.73  Aligned_cols=209  Identities=11%  Similarity=0.052  Sum_probs=151.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchh-------HHHHHHHHHhhhhcccccccCCCCCCceEEEEc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR-------AENLVQSVKQMKLDGELANKGIQPVEMLELVEC  149 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  149 (380)
                      .+++++||||||+|+||++++++|+++|++|++++|+.++       .....+.+...+             .++.++.+
T Consensus        42 ~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g-------------~~~~~~~~  108 (346)
T 3kvo_A           42 RLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVG-------------GKALPCIV  108 (346)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTT-------------CEEEEEEC
T ss_pred             CCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcC-------------CeEEEEEc
Confidence            4578999999999999999999999999999999998764       334444443321             57899999


Q ss_pred             CCCChhcHHHHhc-------CCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEcc
Q 016901          150 DLEKRVQIEPALG-------NASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSS  212 (380)
Q Consensus       150 Dl~d~~~~~~a~~-------~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS  212 (380)
                      |++|.++++++++       ++|+||||||.......      ++...+++|+.|+.++++++.    +.+.++||++||
T Consensus       109 Dv~d~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS  188 (346)
T 3kvo_A          109 DVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISP  188 (346)
T ss_dssp             CTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECC
T ss_pred             cCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECC
Confidence            9999988887763       89999999996532221      223448899999999999884    445679999999


Q ss_pred             CCCCCCCCchhhhchhhHHHHHHHHHHHHHHH------CCCCEEEEecCc-ccCCCcccccccceeeccCCcccCCCCCH
Q 016901          213 LGTNKFGFPAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGG-MERPTDAYKETHNITLSQEDTLFGGQVSN  285 (380)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~------~g~~~~ivRpg~-v~gp~~~~~~~~~~~~~~~~~~~~~~i~~  285 (380)
                      ......    ........|+.+|.+.+.+.+.      .|++++.|.||. +..+...       .+ ......+.+.++
T Consensus       189 ~~~~~~----~~~~~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T~~~~-------~~-~~~~~~~r~~~p  256 (346)
T 3kvo_A          189 PLNLNP----VWFKQHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHTAAMD-------ML-GGPGIESQCRKV  256 (346)
T ss_dssp             CCCCCG----GGTSSSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCCHHHH-------HH-CC--CGGGCBCT
T ss_pred             HHHcCC----CCCCCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCccccHHHH-------hh-ccccccccCCCH
Confidence            765321    0123446799999999877652      589999999996 5433110       00 111123346789


Q ss_pred             HHHHHHHHHHHhCCCCccCcEEEEec
Q 016901          286 LQVAELLACMAKNRSLSYCKVVEVIA  311 (380)
Q Consensus       286 ~DvA~~i~~~l~~~~~~~~~~~ni~~  311 (380)
                      +|+|++++.++.+.....|+++ +-+
T Consensus       257 edvA~~v~~L~s~~~~itG~~i-vdg  281 (346)
T 3kvo_A          257 DIIADAAYSIFQKPKSFTGNFV-IDE  281 (346)
T ss_dssp             HHHHHHHHHHHTSCTTCCSCEE-EHH
T ss_pred             HHHHHHHHHHHhcCCCCCceEE-ECC
Confidence            9999999999988444467765 443

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.88  E-value=1.1e-21  Score=180.67  Aligned_cols=220  Identities=13%  Similarity=0.116  Sum_probs=157.1

Q ss_pred             CCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCCchhH-HHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCCh
Q 016901           78 KDDNLAFVAGAT--GKVGSRTVRELLKLGFRVRAGVRSVQRA-ENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (380)
Q Consensus        78 ~~~~~vlVtGat--G~iG~~lv~~Ll~~G~~V~~l~R~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~  154 (380)
                      +++++|+||||+  |+||++++++|+++|++|+++.|+..+. .+..+.+....            ..++.++.+|++|.
T Consensus        18 l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~------------~~~~~~~~~Dl~~~   85 (267)
T 3gdg_A           18 LKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTY------------GIKAKAYKCQVDSY   85 (267)
T ss_dssp             CTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHH------------CCCEECCBCCTTCH
T ss_pred             cCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhc------------CCceeEEecCCCCH
Confidence            467899999999  9999999999999999999999876544 44433333210            15789999999999


Q ss_pred             hcHHHHh-------cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCC
Q 016901          155 VQIEPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNK  217 (380)
Q Consensus       155 ~~~~~a~-------~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~  217 (380)
                      +++++++       +++|+||||||......      .++...+++|+.|+.++++++    ++.+.++||++||.....
T Consensus        86 ~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~  165 (267)
T 3gdg_A           86 ESCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHI  165 (267)
T ss_dssp             HHHHHHHHHHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccc
Confidence            8887776       36899999999654322      122344889999999998887    455667999999976533


Q ss_pred             CCCchhhhchhhHHHHHHHHHHHHHHH------CCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHH
Q 016901          218 FGFPAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAEL  291 (380)
Q Consensus       218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~~------~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~  291 (380)
                      ...+    .....|+.+|.+.+.+.+.      ..++++.|.||++.++...................+.+.+++|+|++
T Consensus       166 ~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~r~~~~~dva~~  241 (267)
T 3gdg_A          166 ANFP----QEQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDFVPKETQQLWHSMIPMGRDGLAKELKGA  241 (267)
T ss_dssp             CCSS----SCCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGGSCHHHHHHHHTTSTTSSCEETHHHHHH
T ss_pred             cCCC----CCCCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhhCCHHHHHHHHhcCCCCCCcCHHHHHhH
Confidence            2111    2345799999999988762      23899999999998764321111111111112223456789999999


Q ss_pred             HHHHHhCC-CCccCcEEEEecCC
Q 016901          292 LACMAKNR-SLSYCKVVEVIAET  313 (380)
Q Consensus       292 i~~~l~~~-~~~~~~~~ni~~~~  313 (380)
                      ++.++.+. ....|+++++.+|.
T Consensus       242 ~~~l~s~~~~~itG~~i~vdgG~  264 (267)
T 3gdg_A          242 YVYFASDASTYTTGADLLIDGGY  264 (267)
T ss_dssp             HHHHHSTTCTTCCSCEEEESTTG
T ss_pred             hheeecCccccccCCEEEECCce
Confidence            99999764 33568999998875

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.88  E-value=3.9e-22  Score=185.45  Aligned_cols=215  Identities=13%  Similarity=0.049  Sum_probs=153.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++|++|||||+|+||++++++|+++|++|++++|+.++.+++...+                ..++.++.+|++|.+++
T Consensus         3 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----------------~~~~~~~~~Dv~~~~~v   66 (281)
T 3zv4_A            3 LTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH----------------GGNAVGVVGDVRSLQDQ   66 (281)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT----------------BTTEEEEECCTTCHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHc----------------CCcEEEEEcCCCCHHHH
Confidence            46789999999999999999999999999999999988776654321                15789999999999887


Q ss_pred             HHHh-------cCCCEEEEccccCcccc--C---------CCCCcchhhHHHHHHHHHHHHHc---CCCEEEEEccCCCC
Q 016901          158 EPAL-------GNASVVICCIGASEKEV--F---------DITGPYRIDFQATKNLVDAATIA---KVNHFIMVSSLGTN  216 (380)
Q Consensus       158 ~~a~-------~~~d~Vi~~Ag~~~~~~--~---------~~~~~~~~nv~g~~~ll~a~~~~---~v~r~V~~SS~~~~  216 (380)
                      ++++       +++|+||||||......  .         ++...+++|+.|+.++++++...   ..+++|++||....
T Consensus        67 ~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~  146 (281)
T 3zv4_A           67 KRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGF  146 (281)
T ss_dssp             HHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGT
T ss_pred             HHHHHHHHHhcCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhc
Confidence            7665       47899999999643211  1         12334779999999999887432   12699999997664


Q ss_pred             CCCCchhhhchhhHHHHHHHHHHHHHHH------CCCCEEEEecCcccCCCcccccc----cce------eeccCCcccC
Q 016901          217 KFGFPAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKET----HNI------TLSQEDTLFG  280 (380)
Q Consensus       217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~~------~g~~~~ivRpg~v~gp~~~~~~~----~~~------~~~~~~~~~~  280 (380)
                      ...      .....|+.+|.+.+.+.+.      .+++++.|+||++.++.......    ...      .........+
T Consensus       147 ~~~------~~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~  220 (281)
T 3zv4_A          147 YPN------GGGPLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIG  220 (281)
T ss_dssp             SSS------SSCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCTTS
T ss_pred             cCC------CCCchhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCCCC
Confidence            321      2335699999999987752      34999999999998773211000    000      0001112234


Q ss_pred             CCCCHHHHHHHHHHHHhCCC--CccCcEEEEecCCC
Q 016901          281 GQVSNLQVAELLACMAKNRS--LSYCKVVEVIAETT  314 (380)
Q Consensus       281 ~~i~~~DvA~~i~~~l~~~~--~~~~~~~ni~~~~~  314 (380)
                      .+.+++|+|++++.++.++.  ...|+++++.+|..
T Consensus       221 r~~~pedvA~~v~fL~s~~~~~~itG~~i~vdGG~~  256 (281)
T 3zv4_A          221 RMPALEEYTGAYVFFATRGDSLPATGALLNYDGGMG  256 (281)
T ss_dssp             SCCCGGGGSHHHHHHHSTTTSTTCSSCEEEESSSGG
T ss_pred             CCCCHHHHHHHHHHhhcccccccccCcEEEECCCCc
Confidence            56899999999999998332  35789999988753

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.88  E-value=1.4e-21  Score=181.98  Aligned_cols=197  Identities=16%  Similarity=0.124  Sum_probs=146.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +.+++|+||||+|+||++++++|+++|++|++++|+.++.+.+.+.+...+            ..++.++.+|++|.+++
T Consensus        26 ~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------------~~~~~~~~~Dl~d~~~v   93 (286)
T 1xu9_A           26 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG------------AASAHYIAGTMEDMTFA   93 (286)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT------------CSEEEEEECCTTCHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC------------CCceEEEeCCCCCHHHH
Confidence            467899999999999999999999999999999999988777666554321            13688999999999888


Q ss_pred             HHHhc-------CCCEEEEc-cccCccccC-----CCCCcchhhHHHHHHHHHHHHHc---CCCEEEEEccCCCCCCCCc
Q 016901          158 EPALG-------NASVVICC-IGASEKEVF-----DITGPYRIDFQATKNLVDAATIA---KVNHFIMVSSLGTNKFGFP  221 (380)
Q Consensus       158 ~~a~~-------~~d~Vi~~-Ag~~~~~~~-----~~~~~~~~nv~g~~~ll~a~~~~---~v~r~V~~SS~~~~~~~~~  221 (380)
                      +++++       ++|+|||| ||.......     ++...+++|+.|+.++++++...   +.++||++||.+.....  
T Consensus        94 ~~~~~~~~~~~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~--  171 (286)
T 1xu9_A           94 EQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAY--  171 (286)
T ss_dssp             HHHHHHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCC--
T ss_pred             HHHHHHHHHHcCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccCC--
Confidence            77663       79999999 564432111     12334789999999998887532   24699999997663321  


Q ss_pred             hhhhchhhHHHHHHHHHHHHHH---------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHH
Q 016901          222 AAILNLFWGVLLWKRKAEEALI---------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELL  292 (380)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~---------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i  292 (380)
                          .....|+.+|.+.+.+++         ..++++++|+||++.++......      ..  ......++++|+|+.+
T Consensus       172 ----~~~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~------~~--~~~~~~~~~~~vA~~i  239 (286)
T 1xu9_A          172 ----PMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAV------SG--IVHMQAAPKEECALEI  239 (286)
T ss_dssp             ----TTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHS------CG--GGGGGCBCHHHHHHHH
T ss_pred             ----CCccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHHHhc------cc--cccCCCCCHHHHHHHH
Confidence                234579999999987654         25899999999999876321100      00  1112468999999999


Q ss_pred             HHHHhCCC
Q 016901          293 ACMAKNRS  300 (380)
Q Consensus       293 ~~~l~~~~  300 (380)
                      +.++..+.
T Consensus       240 ~~~~~~~~  247 (286)
T 1xu9_A          240 IKGGALRQ  247 (286)
T ss_dssp             HHHHHTTC
T ss_pred             HHHHhcCC
Confidence            99998755

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.88  E-value=4.1e-21  Score=176.20  Aligned_cols=220  Identities=12%  Similarity=0.090  Sum_probs=158.8

Q ss_pred             CCCCCCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCC
Q 016901           75 ADSKDDNLAFVAGATG--KVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLE  152 (380)
Q Consensus        75 ~~~~~~~~vlVtGatG--~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~  152 (380)
                      |..+++|+++||||+|  +||+++++.|+++|++|++..|+++..+++.+.+++.+            ..++.++++|++
T Consensus         1 M~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~------------~~~~~~~~~Dv~   68 (256)
T 4fs3_A            1 MLNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLN------------QPEAHLYQIDVQ   68 (256)
T ss_dssp             CCCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGT------------CSSCEEEECCTT
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC------------CCcEEEEEccCC
Confidence            3456899999999887  99999999999999999999999988888877666542            147889999999


Q ss_pred             ChhcHHHHh-------cCCCEEEEccccCccccC----------CCCCcchhhHHHHHHHHHHHHHcC--CCEEEEEccC
Q 016901          153 KRVQIEPAL-------GNASVVICCIGASEKEVF----------DITGPYRIDFQATKNLVDAATIAK--VNHFIMVSSL  213 (380)
Q Consensus       153 d~~~~~~a~-------~~~d~Vi~~Ag~~~~~~~----------~~~~~~~~nv~g~~~ll~a~~~~~--v~r~V~~SS~  213 (380)
                      |++++++++       +++|++|||||.......          ++...+++|+.+...+.+++...-  -.+||++||.
T Consensus        69 ~~~~v~~~~~~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~  148 (256)
T 4fs3_A           69 SDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYL  148 (256)
T ss_dssp             CHHHHHHHHHHHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECG
T ss_pred             CHHHHHHHHHHHHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEecc
Confidence            998877665       579999999996432111          111225678888888887775432  3589999997


Q ss_pred             CCCCCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccc--cceeeccCCcccCCCCC
Q 016901          214 GTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET--HNITLSQEDTLFGGQVS  284 (380)
Q Consensus       214 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~--~~~~~~~~~~~~~~~i~  284 (380)
                      .....      ......|+.+|...+.+.+       .+|++++.|.||++.+|.......  ............+.+..
T Consensus       149 ~~~~~------~~~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~  222 (256)
T 4fs3_A          149 GGEFA------VQNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPLKRNVD  222 (256)
T ss_dssp             GGTSC------CTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCC
T ss_pred             ccccC------cccchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHHHHHHHHhcCCCCCCcC
Confidence            66332      1234579999999987765       379999999999998764211100  00000011122345678


Q ss_pred             HHHHHHHHHHHHhCC-CCccCcEEEEecC
Q 016901          285 NLQVAELLACMAKNR-SLSYCKVVEVIAE  312 (380)
Q Consensus       285 ~~DvA~~i~~~l~~~-~~~~~~~~ni~~~  312 (380)
                      ++|+|++++.++.+. .+..|+++.+-+|
T Consensus       223 peevA~~v~fL~Sd~a~~iTG~~i~VDGG  251 (256)
T 4fs3_A          223 QVEVGKTAAYLLSDLSSGVTGENIHVDSG  251 (256)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHHHhCchhcCccCCEEEECcC
Confidence            999999999999754 3357888887766

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.88  E-value=1.1e-21  Score=180.71  Aligned_cols=214  Identities=13%  Similarity=0.094  Sum_probs=156.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++|++|||||+++||+++++.|++.|++|++.+|+.+++++..+++.                .++..+++|++|.+++
T Consensus        27 L~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g----------------~~~~~~~~Dv~~~~~v   90 (273)
T 4fgs_A           27 LNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIG----------------GGAVGIQADSANLAEL   90 (273)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC----------------TTCEEEECCTTCHHHH
T ss_pred             hCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC----------------CCeEEEEecCCCHHHH
Confidence            578999999999999999999999999999999999988776655431                5688899999999888


Q ss_pred             HHHh-------cCCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHHHHcC--CCEEEEEccCCCCCCCCch
Q 016901          158 EPAL-------GNASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAATIAK--VNHFIMVSSLGTNKFGFPA  222 (380)
Q Consensus       158 ~~a~-------~~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~~~~~--v~r~V~~SS~~~~~~~~~~  222 (380)
                      ++++       +++|++|||||.......      ++...+++|+.|+..+++++...=  -+++|++||.......   
T Consensus        91 ~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~---  167 (273)
T 4fgs_A           91 DRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGT---  167 (273)
T ss_dssp             HHHHHHHHHHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCC---
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCC---
Confidence            7765       579999999996533221      334458899999999999885421  2489999997653221   


Q ss_pred             hhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccc-cccc------eeeccCCcccCCCCCHHHH
Q 016901          223 AILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-ETHN------ITLSQEDTLFGGQVSNLQV  288 (380)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~-~~~~------~~~~~~~~~~~~~i~~~Dv  288 (380)
                         .....|+.+|.....+.+       .+|++++.|.||.+..|..... ....      ..........+.+..++|+
T Consensus       168 ---~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peei  244 (273)
T 4fgs_A          168 ---PAFSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEEV  244 (273)
T ss_dssp             ---TTCHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTSSCBCHHHH
T ss_pred             ---CCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCCCCcCHHHH
Confidence               233579999999998766       3789999999999987742110 0000      0000111223456789999


Q ss_pred             HHHHHHHHhCCC-CccCcEEEEecCC
Q 016901          289 AELLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       289 A~~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      |.+++.++.+.. +..|+++.+-+|.
T Consensus       245 A~~v~FLaSd~a~~iTG~~i~VDGG~  270 (273)
T 4fgs_A          245 AAAALFLASDDSSFVTGAELFVDGGS  270 (273)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHHHHHhCchhcCccCCeEeECcCh
Confidence            999999997643 4578999887774

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.88  E-value=6e-22  Score=179.33  Aligned_cols=215  Identities=13%  Similarity=0.091  Sum_probs=156.1

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ++++|++|||||+++||+++++.|++.|++|++.+|+..  ++..+.+...+             .++..+.+|++|+++
T Consensus         6 ~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~g-------------~~~~~~~~Dv~d~~~   70 (247)
T 4hp8_A            6 SLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKDG-------------GNASALLIDFADPLA   70 (247)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHTT-------------CCEEEEECCTTSTTT
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHhC-------------CcEEEEEccCCCHHH
Confidence            468999999999999999999999999999999999864  23333444322             678999999999988


Q ss_pred             HHHHh--cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHH----HHcC-CCEEEEEccCCCCCCCCchh
Q 016901          157 IEPAL--GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAK-VNHFIMVSSLGTNKFGFPAA  223 (380)
Q Consensus       157 ~~~a~--~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~----~~~~-v~r~V~~SS~~~~~~~~~~~  223 (380)
                      +++++  .++|++|||||......      .++...+++|+.|+..+.+++    .+.+ -.+||++||.......    
T Consensus        71 v~~~~~~g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~----  146 (247)
T 4hp8_A           71 AKDSFTDAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGG----  146 (247)
T ss_dssp             TTTSSTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC----
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCC----
Confidence            88776  46999999999653322      234455889999998888764    3444 4699999997653321    


Q ss_pred             hhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccc--eeeccCCcccCCCCCHHHHHHHHHH
Q 016901          224 ILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHN--ITLSQEDTLFGGQVSNLQVAELLAC  294 (380)
Q Consensus       224 ~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~--~~~~~~~~~~~~~i~~~DvA~~i~~  294 (380)
                        .....|+.+|.....+.+       .+|++++.|.||+|..|.........  ..........+.+-.++|+|.++++
T Consensus       147 --~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~f  224 (247)
T 4hp8_A          147 --IRVPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILERIPAGRWGHSEDIAGAAVF  224 (247)
T ss_dssp             --SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCTTSSCBCTHHHHHHHHH
T ss_pred             --CCChHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCCCCCCcCHHHHHHHHHH
Confidence              223469999999987765       37999999999999887432110000  0000111223456789999999999


Q ss_pred             HHhCCC-CccCcEEEEecC
Q 016901          295 MAKNRS-LSYCKVVEVIAE  312 (380)
Q Consensus       295 ~l~~~~-~~~~~~~ni~~~  312 (380)
                      ++.+.. +..|+++.+-+|
T Consensus       225 LaSd~a~~iTG~~i~VDGG  243 (247)
T 4hp8_A          225 LSSAAADYVHGAILNVDGG  243 (247)
T ss_dssp             HTSGGGTTCCSCEEEESTT
T ss_pred             HhCchhcCCcCCeEEECcc
Confidence            987643 457888887766

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.88  E-value=2.1e-22  Score=184.95  Aligned_cols=215  Identities=13%  Similarity=0.103  Sum_probs=153.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHH---CCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCCh
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLK---LGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~---~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~  154 (380)
                      +++|++|||||+|+||++++++|++   +|++|++++|+.++.+++.+.+....           ...++.++.+|++|.
T Consensus         4 l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~-----------~~~~~~~~~~Dv~~~   72 (259)
T 1oaa_A            4 LGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQ-----------PDLKVVLAAADLGTE   72 (259)
T ss_dssp             CBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHC-----------TTSEEEEEECCTTSH
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhC-----------CCCeEEEEecCCCCH
Confidence            4678999999999999999999999   89999999999888777666554320           015688999999999


Q ss_pred             hcHHHHhc---------CCC--EEEEccccCcc---------ccCCCCCcchhhHHHHHHHHHHHHHc------CCCEEE
Q 016901          155 VQIEPALG---------NAS--VVICCIGASEK---------EVFDITGPYRIDFQATKNLVDAATIA------KVNHFI  208 (380)
Q Consensus       155 ~~~~~a~~---------~~d--~Vi~~Ag~~~~---------~~~~~~~~~~~nv~g~~~ll~a~~~~------~v~r~V  208 (380)
                      ++++++++         .+|  +||||||....         ...++...+++|+.|+.++++++...      +.++||
T Consensus        73 ~~v~~~~~~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv  152 (259)
T 1oaa_A           73 AGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVV  152 (259)
T ss_dssp             HHHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEE
T ss_pred             HHHHHHHHHHHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEE
Confidence            88877652         468  99999996422         11223345889999999999998643      335799


Q ss_pred             EEccCCCCCCCCchhhhchhhHHHHHHHHHHHHHHH-----CCCCEEEEecCcccCCCccccc----ccc-eeeccCCcc
Q 016901          209 MVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-----SGLPYTIVRPGGMERPTDAYKE----THN-ITLSQEDTL  278 (380)
Q Consensus       209 ~~SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-----~g~~~~ivRpg~v~gp~~~~~~----~~~-~~~~~~~~~  278 (380)
                      ++||......      ......|+.+|.+.+.+.+.     .+++++.|+||++.++......    ... .........
T Consensus       153 ~isS~~~~~~------~~~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p  226 (259)
T 1oaa_A          153 NISSLCALQP------YKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKS  226 (259)
T ss_dssp             EECCGGGTSC------CTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHH
T ss_pred             EEcCchhcCC------CCCccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcchHHHHhhccCChhHHHHHHHhhh
Confidence            9999866432      12345799999999988763     3599999999999776321100    000 000000011


Q ss_pred             cCCCCCHHHHHHHHHHHHhCCCCccCcEEEE
Q 016901          279 FGGQVSNLQVAELLACMAKNRSLSYCKVVEV  309 (380)
Q Consensus       279 ~~~~i~~~DvA~~i~~~l~~~~~~~~~~~ni  309 (380)
                      .+.+.+++|+|++++.++.+.....|+++++
T Consensus       227 ~~~~~~p~dvA~~v~~l~~~~~~itG~~i~v  257 (259)
T 1oaa_A          227 DGALVDCGTSAQKLLGLLQKDTFQSGAHVDF  257 (259)
T ss_dssp             TTCSBCHHHHHHHHHHHHHHCCSCTTEEEET
T ss_pred             cCCcCCHHHHHHHHHHHHhhccccCCcEEec
Confidence            2457899999999999997644455666654

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.88  E-value=5.3e-21  Score=177.13  Aligned_cols=204  Identities=12%  Similarity=0.073  Sum_probs=147.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchh-------HHHHHHHHHhhhhcccccccCCCCCCceEEEEcC
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR-------AENLVQSVKQMKLDGELANKGIQPVEMLELVECD  150 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  150 (380)
                      +++|+++||||+|+||++++++|+++|++|++++|+.++       .++..+.+...+             .++.++.+|
T Consensus         4 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~D   70 (274)
T 3e03_A            4 LSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAG-------------GQGLALKCD   70 (274)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHT-------------SEEEEEECC
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcC-------------CeEEEEeCC
Confidence            467899999999999999999999999999999998754       334443333321             678999999


Q ss_pred             CCChhcHHHHh-------cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccC
Q 016901          151 LEKRVQIEPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSL  213 (380)
Q Consensus       151 l~d~~~~~~a~-------~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~  213 (380)
                      ++|.+++++++       +++|+||||||......      .++...+++|+.|+.++++++.    +.+.++||++||.
T Consensus        71 v~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~  150 (274)
T 3e03_A           71 IREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPP  150 (274)
T ss_dssp             TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCC
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECCh
Confidence            99998887776       47999999999653221      1223447899999999988874    3456799999997


Q ss_pred             CCCCCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCc-ccCCCcccccccceeeccCCcccCCCCCH
Q 016901          214 GTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGG-MERPTDAYKETHNITLSQEDTLFGGQVSN  285 (380)
Q Consensus       214 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~-v~gp~~~~~~~~~~~~~~~~~~~~~~i~~  285 (380)
                      .....    ........|+.+|.+.+.+.+       ..|++++.|+||+ +..+....       ...  .....+.++
T Consensus       151 ~~~~~----~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~~-------~~~--~~~~~~~~p  217 (274)
T 3e03_A          151 PSLNP----AWWGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAINM-------LPG--VDAAACRRP  217 (274)
T ss_dssp             CCCCH----HHHHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC--------------C--CCGGGSBCT
T ss_pred             HhcCC----CCCCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhhh-------ccc--ccccccCCH
Confidence            65321    012344579999999997765       2689999999995 55442210       000  111236789


Q ss_pred             HHHHHHHHHHHhCCC-CccCcEE
Q 016901          286 LQVAELLACMAKNRS-LSYCKVV  307 (380)
Q Consensus       286 ~DvA~~i~~~l~~~~-~~~~~~~  307 (380)
                      +|+|++++.++.... ...|+++
T Consensus       218 edvA~~v~~l~s~~~~~itG~~i  240 (274)
T 3e03_A          218 EIMADAAHAVLTREAAGFHGQFL  240 (274)
T ss_dssp             HHHHHHHHHHHTSCCTTCCSCEE
T ss_pred             HHHHHHHHHHhCccccccCCeEE
Confidence            999999999998654 2356666

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.88  E-value=1.4e-22  Score=184.05  Aligned_cols=200  Identities=13%  Similarity=0.077  Sum_probs=148.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      .++|+||||||+|+||++++++|+++|++|++++|++++..                       ....++.+|++|.+++
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-----------------------~~~~~~~~D~~~~~~v   61 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA-----------------------SASVIVKMTDSFTEQA   61 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS-----------------------SEEEECCCCSCHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc-----------------------CCcEEEEcCCCCHHHH
Confidence            35789999999999999999999999999999999875421                       2457788999999888


Q ss_pred             HHHhc---------CCCEEEEccccCccccC-------CCCCcchhhHHHHHHHHHHHHHcC--CCEEEEEccCCCCCCC
Q 016901          158 EPALG---------NASVVICCIGASEKEVF-------DITGPYRIDFQATKNLVDAATIAK--VNHFIMVSSLGTNKFG  219 (380)
Q Consensus       158 ~~a~~---------~~d~Vi~~Ag~~~~~~~-------~~~~~~~~nv~g~~~ll~a~~~~~--v~r~V~~SS~~~~~~~  219 (380)
                      +++++         ++|+||||||.......       ++...+++|+.++.++++++...-  .++||++||.......
T Consensus        62 ~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  141 (241)
T 1dhr_A           62 DQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGT  141 (241)
T ss_dssp             HHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC
T ss_pred             HHHHHHHHHHhCCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCC
Confidence            77663         79999999996532211       223447899999999999987531  2589999997664321


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHHH---------CCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHH
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALIA---------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAE  290 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~---------~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~  290 (380)
                            .....|+.+|.+.+.+.+.         .|+++++|+||++.++......      . . .....+++++|+|+
T Consensus       142 ------~~~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~~~~------~-~-~~~~~~~~~~~vA~  207 (241)
T 1dhr_A          142 ------PGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSM------P-E-ADFSSWTPLEFLVE  207 (241)
T ss_dssp             ------TTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHS------T-T-SCGGGSEEHHHHHH
T ss_pred             ------CCchHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCccccccC------c-c-hhhccCCCHHHHHH
Confidence                  2345799999999988762         4699999999999776321100      0 0 11224578999999


Q ss_pred             HHHHHHhCCC-CccCcEEEEecCCC
Q 016901          291 LLACMAKNRS-LSYCKVVEVIAETT  314 (380)
Q Consensus       291 ~i~~~l~~~~-~~~~~~~ni~~~~~  314 (380)
                      +++.++.... ...|+.+++.++..
T Consensus       208 ~v~~l~~~~~~~~~G~~~~v~g~~~  232 (241)
T 1dhr_A          208 TFHDWITGNKRPNSGSLIQVVTTDG  232 (241)
T ss_dssp             HHHHHHTTTTCCCTTCEEEEEEETT
T ss_pred             HHHHHhcCCCcCccceEEEEeCCCC
Confidence            9999997643 34688888877653

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.88  E-value=4.4e-21  Score=175.66  Aligned_cols=217  Identities=12%  Similarity=0.072  Sum_probs=154.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .+++|++|||||+++||+++++.|++.|++|+++.|+.+..+.. +.+...+             .++.++.+|++|+++
T Consensus         4 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~-~~~~~~~-------------~~~~~~~~Dv~~~~~   69 (258)
T 4gkb_A            4 NLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFL-DALAQRQ-------------PRATYLPVELQDDAQ   69 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHH-HHHHHHC-------------TTCEEEECCTTCHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHH-HHHHhcC-------------CCEEEEEeecCCHHH
Confidence            35789999999999999999999999999999999988765433 2233221             678999999999987


Q ss_pred             HHHHh-------cCCCEEEEccccCccccC-----CCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCCCC
Q 016901          157 IEPAL-------GNASVVICCIGASEKEVF-----DITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       157 ~~~a~-------~~~d~Vi~~Ag~~~~~~~-----~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~~~  220 (380)
                      +++++       +++|++|||||.......     ++...+++|+.|+..+.+++.    +.+ .+||++||......  
T Consensus        70 v~~~v~~~~~~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~~~--  146 (258)
T 4gkb_A           70 CRDAVAQTIATFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATR-GAIVNISSKTAVTG--  146 (258)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTHHHHC--
T ss_pred             HHHHHHHHHHHhCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEeehhhccC--
Confidence            77665       579999999996533222     233347899999888877663    333 68999999765221  


Q ss_pred             chhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccc-ccccc-----e-eeccCCcccCCCCCHH
Q 016901          221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAY-KETHN-----I-TLSQEDTLFGGQVSNL  286 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~-~~~~~-----~-~~~~~~~~~~~~i~~~  286 (380)
                          ......|+.+|...+.+.+       .+|++++.|.||++..|.... .....     . .+.........+..++
T Consensus       147 ----~~~~~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg~R~g~pe  222 (258)
T 4gkb_A          147 ----QGNTSGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPD  222 (258)
T ss_dssp             ----CSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTTTTSCBCHH
T ss_pred             ----CCCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCCCCCCcCHH
Confidence                1233579999999997765       379999999999998774211 00000     0 0111111112467899


Q ss_pred             HHHHHHHHHHhCCC-CccCcEEEEecCCC
Q 016901          287 QVAELLACMAKNRS-LSYCKVVEVIAETT  314 (380)
Q Consensus       287 DvA~~i~~~l~~~~-~~~~~~~ni~~~~~  314 (380)
                      |+|.+++.++.+.. +..|+++.+-+|-.
T Consensus       223 eiA~~v~fLaS~~a~~iTG~~i~VDGG~T  251 (258)
T 4gkb_A          223 EIADTAVFLLSPRASHTTGEWLFVDGGYT  251 (258)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHHHHHHHHhCchhcCccCCeEEECCCcc
Confidence            99999999987543 45789998887753

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.87  E-value=1.9e-22  Score=181.10  Aligned_cols=198  Identities=12%  Similarity=0.082  Sum_probs=145.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .+++|++|||||+|+||++++++|+++|++|++++|+.                           .      +|++|+++
T Consensus         3 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~---------------------------~------~D~~~~~~   49 (223)
T 3uce_A            3 GSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQT---------------------------G------LDISDEKS   49 (223)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGG---------------------------T------CCTTCHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCc---------------------------c------cCCCCHHH
Confidence            34678999999999999999999999999999998864                           1      79999998


Q ss_pred             HHHHh---cCCCEEEEccccCcc-cc------CCCCCcchhhHHHHHHHHHHHHHcC--CCEEEEEccCCCCCCCCchhh
Q 016901          157 IEPAL---GNASVVICCIGASEK-EV------FDITGPYRIDFQATKNLVDAATIAK--VNHFIMVSSLGTNKFGFPAAI  224 (380)
Q Consensus       157 ~~~a~---~~~d~Vi~~Ag~~~~-~~------~~~~~~~~~nv~g~~~ll~a~~~~~--v~r~V~~SS~~~~~~~~~~~~  224 (380)
                      +++++   +++|+||||||.... ..      .++...+++|+.|+.++++++...-  .++||++||......      
T Consensus        50 v~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~------  123 (223)
T 3uce_A           50 VYHYFETIGAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKV------  123 (223)
T ss_dssp             HHHHHHHHCSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSC------
T ss_pred             HHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccC------
Confidence            88877   479999999996521 11      1223347899999999999987642  248999999866432      


Q ss_pred             hchhhHHHHHHHHHHHHHHH-----CCCCEEEEecCcccCCCcccccccc----eeeccCCcccCCCCCHHHHHHHHHHH
Q 016901          225 LNLFWGVLLWKRKAEEALIA-----SGLPYTIVRPGGMERPTDAYKETHN----ITLSQEDTLFGGQVSNLQVAELLACM  295 (380)
Q Consensus       225 ~~~~~~Y~~sK~~~E~~l~~-----~g~~~~ivRpg~v~gp~~~~~~~~~----~~~~~~~~~~~~~i~~~DvA~~i~~~  295 (380)
                      ......|+.+|.+.+.+.+.     ..++++.|+||++.+|.........    ..........+.+.+++|+|++++.+
T Consensus       124 ~~~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l  203 (223)
T 3uce_A          124 VANTYVKAAINAAIEATTKVLAKELAPIRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPVGKVGEASDIAMAYLFA  203 (223)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHSTTCSCBCHHHHHHHHHHH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCCCCCccCHHHHHHHHHHH
Confidence            12345799999999987752     2399999999999987432110000    00001112234578999999999999


Q ss_pred             HhCCCCccCcEEEEecCCC
Q 016901          296 AKNRSLSYCKVVEVIAETT  314 (380)
Q Consensus       296 l~~~~~~~~~~~ni~~~~~  314 (380)
                      +.+.. ..|+++++.+|..
T Consensus       204 ~~~~~-~tG~~i~vdgG~~  221 (223)
T 3uce_A          204 IQNSY-MTGTVIDVDGGAL  221 (223)
T ss_dssp             HHCTT-CCSCEEEESTTGG
T ss_pred             ccCCC-CCCcEEEecCCee
Confidence            98644 6789999988753

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.87  E-value=1.4e-21  Score=177.94  Aligned_cols=201  Identities=16%  Similarity=0.119  Sum_probs=130.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc-
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ-  156 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~-  156 (380)
                      ++++++|||||+|+||++++++|++ |++|++++|+.++.+.+.+                  ..++.++.+|++|... 
T Consensus         3 l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~------------------~~~~~~~~~D~~~~~~~   63 (245)
T 3e9n_A            3 LKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE------------------IEGVEPIESDIVKEVLE   63 (245)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT------------------STTEEEEECCHHHHHHT
T ss_pred             CCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh------------------hcCCcceecccchHHHH
Confidence            3678999999999999999999987 9999999999877665432                  1568899999988633 


Q ss_pred             --HHHH---hcCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCCCCc
Q 016901          157 --IEPA---LGNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFP  221 (380)
Q Consensus       157 --~~~a---~~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~~~~  221 (380)
                        +.+.   ++++|+||||||......      .++...+++|+.|+.++++++.    +.+ ++||++||......   
T Consensus        64 ~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~---  139 (245)
T 3e9n_A           64 EGGVDKLKNLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNGP---  139 (245)
T ss_dssp             SSSCGGGTTCSCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC----------
T ss_pred             HHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCcccccC---
Confidence              2222   347999999999653322      1233447899999888877763    334 78999999766432   


Q ss_pred             hhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHH
Q 016901          222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLAC  294 (380)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~  294 (380)
                         ......|+.+|.+.+.+++       ..|+++++|+||.+.++.......    ..........+++++|+|++++.
T Consensus       140 ---~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~----~~~~~~~~~~~~~p~dvA~~i~~  212 (245)
T 3e9n_A          140 ---HPGNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMD----SQGTNFRPEIYIEPKEIANAIRF  212 (245)
T ss_dssp             ------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------------------CCGGGSCHHHHHHHHHH
T ss_pred             ---CCCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhhh----hhhcccccccCCCHHHHHHHHHH
Confidence               1334579999999998875       268999999999999874321100    00011112346899999999999


Q ss_pred             HHhCCCCccCcEEEEe
Q 016901          295 MAKNRSLSYCKVVEVI  310 (380)
Q Consensus       295 ~l~~~~~~~~~~~ni~  310 (380)
                      ++..+..  +.++|+.
T Consensus       213 l~~~~~~--~~~~~i~  226 (245)
T 3e9n_A          213 VIDAGET--TQITNVD  226 (245)
T ss_dssp             HHTSCTT--EEEEEEE
T ss_pred             HHcCCCc--cceeeeE
Confidence            9988763  6677764

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.87  E-value=1.6e-21  Score=183.05  Aligned_cols=204  Identities=14%  Similarity=0.094  Sum_probs=147.4

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCCh-h
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR-V  155 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~-~  155 (380)
                      +..+++||||||+|+||++++++|+++|++|++++|+.++..+..+.+...+            ..++.++.+|++|. +
T Consensus         9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~------------~~~~~~~~~Dl~~~~~   76 (311)
T 3o26_A            9 VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSN------------HENVVFHQLDVTDPIA   76 (311)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT------------CCSEEEEECCTTSCHH
T ss_pred             cCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------------CCceEEEEccCCCcHH
Confidence            3467899999999999999999999999999999999988877766654321            14799999999998 7


Q ss_pred             cHHHHh-------cCCCEEEEccccCccc------------------------------------cCCCCCcchhhHHHH
Q 016901          156 QIEPAL-------GNASVVICCIGASEKE------------------------------------VFDITGPYRIDFQAT  192 (380)
Q Consensus       156 ~~~~a~-------~~~d~Vi~~Ag~~~~~------------------------------------~~~~~~~~~~nv~g~  192 (380)
                      ++++++       +++|+||||||.....                                    ...+...+++|+.|+
T Consensus        77 ~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~  156 (311)
T 3o26_A           77 TMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGV  156 (311)
T ss_dssp             HHHHHHHHHHHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHH
T ss_pred             HHHHHHHHHHHhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehH
Confidence            666655       4799999999965321                                    011223378999999


Q ss_pred             HHHHHHHH----HcCCCEEEEEccCCCCCCCCch-------------------------------------hhhchhhHH
Q 016901          193 KNLVDAAT----IAKVNHFIMVSSLGTNKFGFPA-------------------------------------AILNLFWGV  231 (380)
Q Consensus       193 ~~ll~a~~----~~~v~r~V~~SS~~~~~~~~~~-------------------------------------~~~~~~~~Y  231 (380)
                      .++++++.    +.+.++||++||..........                                     ........|
T Consensus       157 ~~l~~~~~~~l~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y  236 (311)
T 3o26_A          157 KSVTEVLIPLLQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAY  236 (311)
T ss_dssp             HHHHHHHHHHHTTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHH
T ss_pred             HHHHHHhhHhhccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhh
Confidence            88888774    3456799999997553211000                                     001233579


Q ss_pred             HHHHHHHHHHHHH-----CCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHHHHhCCCCccCcE
Q 016901          232 LLWKRKAEEALIA-----SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKV  306 (380)
Q Consensus       232 ~~sK~~~E~~l~~-----~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~~~~~~~~  306 (380)
                      +.+|++.+.+.+.     .+++++.|+||+|.++....               .....+++.|+.++.++..+....+..
T Consensus       237 ~~SK~a~~~~~~~la~e~~~i~v~~v~PG~v~T~~~~~---------------~~~~~~~~~a~~~~~~~~~~~~~~~g~  301 (311)
T 3o26_A          237 TTSKACLNAYTRVLANKIPKFQVNCVCPGLVKTEMNYG---------------IGNYTAEEGAEHVVRIALFPDDGPSGF  301 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHCTTSEEEEECCCSBCSGGGTT---------------CCSBCHHHHHHHHHHHHTCCSSCCCSC
T ss_pred             HHHHHHHHHHHHHHHhhcCCceEEEecCCceecCCcCC---------------CCCCCHHHHHHHHHHHHhCCCCCCCce
Confidence            9999999988763     46999999999998763210               123689999999999988765333333


Q ss_pred             E
Q 016901          307 V  307 (380)
Q Consensus       307 ~  307 (380)
                      |
T Consensus       302 ~  302 (311)
T 3o26_A          302 F  302 (311)
T ss_dssp             E
T ss_pred             E
Confidence            3

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.86  E-value=1.3e-20  Score=173.02  Aligned_cols=209  Identities=18%  Similarity=0.144  Sum_probs=149.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .+++|++|||||+++||+++++.|+++|++|++..|+....                       .....++++|++|.++
T Consensus         8 ~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~-----------------------~~~~~~~~~Dv~~~~~   64 (261)
T 4h15_A            8 NLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG-----------------------LPEELFVEADLTTKEG   64 (261)
T ss_dssp             CCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT-----------------------SCTTTEEECCTTSHHH
T ss_pred             CCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC-----------------------CCcEEEEEcCCCCHHH
Confidence            45789999999999999999999999999999999975421                       1344578999999988


Q ss_pred             HHHHh-------cCCCEEEEccccCccc--------cCCCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCC
Q 016901          157 IEPAL-------GNASVVICCIGASEKE--------VFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNK  217 (380)
Q Consensus       157 ~~~a~-------~~~d~Vi~~Ag~~~~~--------~~~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~  217 (380)
                      +++++       +++|++|||||.....        ..++...+++|+.|+.++++++    ++.+-.+||++||.....
T Consensus        65 v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~  144 (261)
T 4h15_A           65 CAIVAEATRQRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVL  144 (261)
T ss_dssp             HHHHHHHHHHHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhcc
Confidence            77665       5799999999954221        1123445889999988777665    456667999999976532


Q ss_pred             CCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccc-----cccce---------eeccCC
Q 016901          218 FGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-----ETHNI---------TLSQED  276 (380)
Q Consensus       218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~-----~~~~~---------~~~~~~  276 (380)
                      .. +    .....|+.+|.+.+.+.+       .+|++++.|.||++..|.....     .....         ......
T Consensus       145 ~~-~----~~~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (261)
T 4h15_A          145 PL-P----ESTTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGG  219 (261)
T ss_dssp             CC-T----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTC
T ss_pred             CC-C----CccHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcC
Confidence            21 1    123469999999987765       3799999999999987632100     00000         000112


Q ss_pred             cccCCCCCHHHHHHHHHHHHhCCC-CccCcEEEEecCC
Q 016901          277 TLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       277 ~~~~~~i~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      ...+.+..++|+|++++.++.+.. +..|+++.+-+|-
T Consensus       220 ~PlgR~g~peevA~~v~fLaS~~a~~itG~~i~VDGG~  257 (261)
T 4h15_A          220 IPLGRPAKPEEVANLIAFLASDRAASITGAEYTIDGGT  257 (261)
T ss_dssp             CTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CCCCCCcCHHHHHHHHHHHhCchhcCccCcEEEECCcC
Confidence            233456899999999999996543 3578999887775

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.86  E-value=1.7e-21  Score=179.88  Aligned_cols=214  Identities=11%  Similarity=0.078  Sum_probs=152.0

Q ss_pred             CCCCCeEEEEcC--CChHHHHHHHHHHHCCCeEEEEeCCchhH-HHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCC
Q 016901           77 SKDDNLAFVAGA--TGKVGSRTVRELLKLGFRVRAGVRSVQRA-ENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK  153 (380)
Q Consensus        77 ~~~~~~vlVtGa--tG~iG~~lv~~Ll~~G~~V~~l~R~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d  153 (380)
                      .+++|+++||||  +|+||++++++|+++|++|++++|+.++. +++.+   .+             ..++.++.+|++|
T Consensus         4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~---~~-------------~~~~~~~~~Dv~~   67 (269)
T 2h7i_A            4 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITD---RL-------------PAKAPLLELDVQN   67 (269)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHT---TS-------------SSCCCEEECCTTC
T ss_pred             ccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHH---hc-------------CCCceEEEccCCC
Confidence            346789999999  99999999999999999999999987652 33221   10             1468889999999


Q ss_pred             hhcHHHHhc----------CCCEEEEccccCcc-----cc------CCCCCcchhhHHHHHHHHHHHHHcC--CCEEEEE
Q 016901          154 RVQIEPALG----------NASVVICCIGASEK-----EV------FDITGPYRIDFQATKNLVDAATIAK--VNHFIMV  210 (380)
Q Consensus       154 ~~~~~~a~~----------~~d~Vi~~Ag~~~~-----~~------~~~~~~~~~nv~g~~~ll~a~~~~~--v~r~V~~  210 (380)
                      +++++++++          ++|+||||||....     ..      .++...+++|+.|+.++++++...-  -++||++
T Consensus        68 ~~~v~~~~~~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i  147 (269)
T 2h7i_A           68 EEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGM  147 (269)
T ss_dssp             HHHHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred             HHHHHHHHHHHHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEE
Confidence            988887764          89999999996531     11      1223347899999999999986531  2589999


Q ss_pred             ccCCCCCCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccc--c--ccc--------ee
Q 016901          211 SSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK--E--THN--------IT  271 (380)
Q Consensus       211 SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~--~--~~~--------~~  271 (380)
                      ||.+..  +     ......|+.+|.+.+.+.+       ..|+++++|+||++.++.....  .  ...        ..
T Consensus       148 ss~~~~--~-----~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  220 (269)
T 2h7i_A          148 DFDPSR--A-----MPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEE  220 (269)
T ss_dssp             ECCCSS--C-----CTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHH
T ss_pred             cCcccc--c-----cCchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHH
Confidence            997652  1     1234579999999987765       2699999999999987631100  0  000        00


Q ss_pred             eccCCcccC-CCCCHHHHHHHHHHHHhCCC-CccCcEEEEecCC
Q 016901          272 LSQEDTLFG-GQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       272 ~~~~~~~~~-~~i~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      ........+ .+..++|+|++++.++.+.. ...|+++.+.+|.
T Consensus       221 ~~~~~~p~~rr~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  264 (269)
T 2h7i_A          221 GWDQRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGA  264 (269)
T ss_dssp             HHHHHCTTCCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTG
T ss_pred             hhhccCCcccCCCCHHHHHHHHHHHhCchhccCcceEEEecCCe
Confidence            000111223 36789999999999997643 3568888887764

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.85  E-value=1.3e-21  Score=178.17  Aligned_cols=206  Identities=13%  Similarity=0.027  Sum_probs=141.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-e--CCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAG-V--RSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l-~--R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      +|+++||||+|+||++++++|+++|++|+++ .  |+.++.+.+.+.+                 .+..+     .|.++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~-----------------~~~~~-----~~~~~   58 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN-----------------PGTIA-----LAEQK   58 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS-----------------TTEEE-----CCCCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh-----------------CCCcc-----cCHHH
Confidence            3689999999999999999999999999999 6  9987766554322                 01222     13333


Q ss_pred             HHHHh-------cCCCEEEEccccCcc---ccC------CCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCC
Q 016901          157 IEPAL-------GNASVVICCIGASEK---EVF------DITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTN  216 (380)
Q Consensus       157 ~~~a~-------~~~d~Vi~~Ag~~~~---~~~------~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~  216 (380)
                      +++++       +++|+||||||....   ...      ++...+++|+.|+.++++++.    +.+.++||++||....
T Consensus        59 v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~  138 (244)
T 1zmo_A           59 PERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGK  138 (244)
T ss_dssp             GGGHHHHHGGGSSCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGT
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhC
Confidence            33333       479999999996543   111      223347899999999888774    5566899999997663


Q ss_pred             CCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCc---ccccccc-e-eeccCCcccCCCCC
Q 016901          217 KFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTD---AYKETHN-I-TLSQEDTLFGGQVS  284 (380)
Q Consensus       217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~---~~~~~~~-~-~~~~~~~~~~~~i~  284 (380)
                      ...      .....|+.+|.+.+.+.+       ..|+++++|+||++.++..   ....... . .+.......+.+.+
T Consensus       139 ~~~------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~  212 (244)
T 1zmo_A          139 KPL------AYNPLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENNPELRERVDRDVPLGRLGR  212 (244)
T ss_dssp             SCC------TTCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHHCHHHHHHHHHHCTTCSCBC
T ss_pred             CCC------CCchHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccchHHHHHHHhcCCCCCCCcC
Confidence            321      233469999999997765       2689999999999988743   1100000 0 00000112235689


Q ss_pred             HHHHHHHHHHHHhCCC-CccCcEEEEecCC
Q 016901          285 NLQVAELLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       285 ~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      ++|+|++++.++.... ...|+++.+.+|.
T Consensus       213 pe~vA~~v~~l~s~~~~~~tG~~i~vdgG~  242 (244)
T 1zmo_A          213 PDEMGALITFLASRRAAPIVGQFFAFTGGY  242 (244)
T ss_dssp             HHHHHHHHHHHHTTTTGGGTTCEEEESTTC
T ss_pred             HHHHHHHHHHHcCccccCccCCEEEeCCCC
Confidence            9999999999998643 3468888887764

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.85  E-value=3.6e-20  Score=183.20  Aligned_cols=214  Identities=14%  Similarity=0.091  Sum_probs=150.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +.++++|||||+|+||+++++.|+++|++|+++.|+... +.+.+....               .++.++.+|++|.+++
T Consensus       211 l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~-~~l~~~~~~---------------~~~~~~~~Dvtd~~~v  274 (454)
T 3u0b_A          211 LDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAA-EDLKRVADK---------------VGGTALTLDVTADDAV  274 (454)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGH-HHHHHHHHH---------------HTCEEEECCTTSTTHH
T ss_pred             CCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccH-HHHHHHHHH---------------cCCeEEEEecCCHHHH
Confidence            467899999999999999999999999999999987532 222222222               2467899999999888


Q ss_pred             HHHhc-------C-CCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHHHHc----CCCEEEEEccCCCCCCC
Q 016901          158 EPALG-------N-ASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAATIA----KVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       158 ~~a~~-------~-~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~~~~----~v~r~V~~SS~~~~~~~  219 (380)
                      +++++       + +|+||||||.......      ++...+++|+.|+.++.+++...    +..+||++||...... 
T Consensus       275 ~~~~~~~~~~~g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g-  353 (454)
T 3u0b_A          275 DKITAHVTEHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAG-  353 (454)
T ss_dssp             HHHHHHHHHHSTTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHC-
T ss_pred             HHHHHHHHHHcCCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCC-
Confidence            87763       4 9999999997543221      23344789999999999999865    5679999999754221 


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHH
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELL  292 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i  292 (380)
                           ......|+.+|...+.+.+       ..|+++++|+||++.++.......................+++|+|+++
T Consensus       354 -----~~g~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~l~r~g~pedvA~~v  428 (454)
T 3u0b_A          354 -----NRGQTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLATREVGRRLNSLFQGGQPVDVAELI  428 (454)
T ss_dssp             -----CTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC----------CHHHHHSBTTSSCBCHHHHHHHH
T ss_pred             -----CCCCHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchhhHHHHHhhccccCCCCHHHHHHHH
Confidence                 1234579999998876654       3799999999999988743211100000001111223456899999999


Q ss_pred             HHHHhCC-CCccCcEEEEecCC
Q 016901          293 ACMAKNR-SLSYCKVVEVIAET  313 (380)
Q Consensus       293 ~~~l~~~-~~~~~~~~ni~~~~  313 (380)
                      ..++... ....|+++++.++.
T Consensus       429 ~fL~s~~a~~itG~~i~vdGG~  450 (454)
T 3u0b_A          429 AYFASPASNAVTGNTIRVCGQA  450 (454)
T ss_dssp             HHHHCGGGTTCCSCEEEESSSB
T ss_pred             HHHhCCccCCCCCcEEEECCcc
Confidence            9998754 33578999988775

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.84  E-value=6.7e-21  Score=180.29  Aligned_cols=203  Identities=15%  Similarity=0.076  Sum_probs=144.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEe---------CCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEE
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGV---------RSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVE  148 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~---------R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  148 (380)
                      +++|+++||||+|+||+++++.|+++|++|++.+         |+.++.+...+.+...+             .   ...
T Consensus         7 l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~-------------~---~~~   70 (319)
T 1gz6_A            7 FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRG-------------G---KAV   70 (319)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTT-------------C---EEE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhC-------------C---eEE
Confidence            4678999999999999999999999999999964         45666666555544321             1   135


Q ss_pred             cCCCChhcHHHHh-------cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEc
Q 016901          149 CDLEKRVQIEPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVS  211 (380)
Q Consensus       149 ~Dl~d~~~~~~a~-------~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~S  211 (380)
                      +|++|.+++++++       +++|+||||||......      .++...+++|+.|+.++++++    ++.+.++||++|
T Consensus        71 ~D~~~~~~~~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vs  150 (319)
T 1gz6_A           71 ANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTA  150 (319)
T ss_dssp             EECCCGGGHHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred             EeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEC
Confidence            7999988766554       47999999999653321      123345789999998888876    455678999999


Q ss_pred             cCCCCCCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCC
Q 016901          212 SLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVS  284 (380)
Q Consensus       212 S~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~  284 (380)
                      |......      ......|+.+|.+.+.+.+       .+|+++++|+||.+ .+...   . .  ..   .....+++
T Consensus       151 S~~~~~~------~~~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~---~-~--~~---~~~~~~~~  214 (319)
T 1gz6_A          151 SASGIYG------NFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTE---T-V--MP---EDLVEALK  214 (319)
T ss_dssp             CHHHHHC------CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTG---G-G--SC---HHHHHHSC
T ss_pred             ChhhccC------CCCCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-ccccc---c-c--CC---hhhhccCC
Confidence            9643211      1134579999999987765       26899999999998 43211   0 0  00   00113478


Q ss_pred             HHHHHHHHHHHHhCCCCccCcEEEEecC
Q 016901          285 NLQVAELLACMAKNRSLSYCKVVEVIAE  312 (380)
Q Consensus       285 ~~DvA~~i~~~l~~~~~~~~~~~ni~~~  312 (380)
                      ++|+|.+++.++..+....|++|++.++
T Consensus       215 p~dvA~~~~~l~s~~~~~tG~~~~v~GG  242 (319)
T 1gz6_A          215 PEYVAPLVLWLCHESCEENGGLFEVGAG  242 (319)
T ss_dssp             GGGTHHHHHHHTSTTCCCCSCEEEEETT
T ss_pred             HHHHHHHHHHHhCchhhcCCCEEEECCC
Confidence            9999999999998765456888888665

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.84  E-value=1.4e-20  Score=178.69  Aligned_cols=208  Identities=12%  Similarity=0.074  Sum_probs=141.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      +++||||||+|+||++++++|+++|++|+++.|+..+.....+.++..+.       ......++.++.+|++|.+++++
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~Dv~d~~~v~~   74 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARA-------LACPPGSLETLQLDVRDSKSVAA   74 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHH-------TTCCTTSEEEEECCTTCHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhh-------ccCCCCceEEEEecCCCHHHHHH
Confidence            46899999999999999999999999998888765544333332222110       00011578999999999999998


Q ss_pred             HhcC-----CCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCCCCchhh
Q 016901          160 ALGN-----ASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGFPAAI  224 (380)
Q Consensus       160 a~~~-----~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~~~~~~~  224 (380)
                      +++.     +|+||||||......      .++...+++|+.|+.++++++    ++.+.++||++||.......     
T Consensus        75 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~-----  149 (327)
T 1jtv_A           75 ARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGL-----  149 (327)
T ss_dssp             HHHTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCC-----
T ss_pred             HHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCC-----
Confidence            8864     899999999643221      123345889999999999885    45567899999998663321     


Q ss_pred             hchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccccccc-ceeecc-C--------------CcccCC
Q 016901          225 LNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH-NITLSQ-E--------------DTLFGG  281 (380)
Q Consensus       225 ~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~-~~~~~~-~--------------~~~~~~  281 (380)
                       .....|+.+|++++.+.+       ..|+++++|+||+|.++........ ...+.. .              ....+.
T Consensus       150 -~~~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (327)
T 1jtv_A          150 -PFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFRE  228 (327)
T ss_dssp             -TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             -CCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHHHHHHHHhhhh
Confidence             223579999999997765       2699999999999988742110000 000000 0              000111


Q ss_pred             -CCCHHHHHHHHHHHHhCCC
Q 016901          282 -QVSNLQVAELLACMAKNRS  300 (380)
Q Consensus       282 -~i~~~DvA~~i~~~l~~~~  300 (380)
                       .++++|+|++++.++..+.
T Consensus       229 ~~~~pedvA~~i~~l~~~~~  248 (327)
T 1jtv_A          229 AAQNPEEVAEVFLTALRAPK  248 (327)
T ss_dssp             HCBCHHHHHHHHHHHHHCSS
T ss_pred             cCCCHHHHHHHHHHHHcCCC
Confidence             2689999999999998754

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.84  E-value=4.7e-20  Score=183.99  Aligned_cols=200  Identities=19%  Similarity=0.167  Sum_probs=145.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEeCCchh---HHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCC
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFR-VRAGVRSVQR---AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK  153 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~-V~~l~R~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d  153 (380)
                      ..++++|||||+|+||.+++++|+++|++ |+++.|+...   ..++.+.+...+             .++.++.+|++|
T Consensus       224 ~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g-------------~~v~~~~~Dv~d  290 (486)
T 2fr1_A          224 KPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALG-------------ARTTVAACDVTD  290 (486)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTT-------------CEEEEEECCTTC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcC-------------CEEEEEEeCCCC
Confidence            35789999999999999999999999985 9999998753   344444443321             578999999999


Q ss_pred             hhcHHHHhcCC------CEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCCc
Q 016901          154 RVQIEPALGNA------SVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFP  221 (380)
Q Consensus       154 ~~~~~~a~~~~------d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~  221 (380)
                      .+++.++++.+      |+||||||......      .++...+++|+.|+.++++++...+.++||++||.......  
T Consensus       291 ~~~v~~~~~~i~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~g~--  368 (486)
T 2fr1_A          291 RESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGA--  368 (486)
T ss_dssp             HHHHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCC--
T ss_pred             HHHHHHHHHHHHhcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcCCC--
Confidence            99999988654      99999999654321      12233477899999999999998888999999996442211  


Q ss_pred             hhhhchhhHHHHHHHHHHHHHH---HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHHHHhC
Q 016901          222 AAILNLFWGVLLWKRKAEEALI---ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKN  298 (380)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~---~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~  298 (380)
                          .....|+.+|...+.+.+   ..|+++++|+||.+++++...... ...+..   ....+++++|+++++..++..
T Consensus       369 ----~g~~~Yaaaka~l~~la~~~~~~gi~v~~i~pG~~~~~gm~~~~~-~~~~~~---~g~~~i~~e~~a~~l~~~l~~  440 (486)
T 2fr1_A          369 ----PGLGGYAPGNAYLDGLAQQRRSDGLPATAVAWGTWAGSGMAEGPV-ADRFRR---HGVIEMPPETACRALQNALDR  440 (486)
T ss_dssp             ----TTCTTTHHHHHHHHHHHHHHHHTTCCCEEEEECCBC-------------CTT---TTEECBCHHHHHHHHHHHHHT
T ss_pred             ----CCCHHHHHHHHHHHHHHHHHHhcCCeEEEEECCeeCCCcccchhH-HHHHHh---cCCCCCCHHHHHHHHHHHHhC
Confidence                123469999999987654   589999999999998764321110 000111   111369999999999999987


Q ss_pred             CC
Q 016901          299 RS  300 (380)
Q Consensus       299 ~~  300 (380)
                      +.
T Consensus       441 ~~  442 (486)
T 2fr1_A          441 AE  442 (486)
T ss_dssp             TC
T ss_pred             CC
Confidence            65

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.82  E-value=2e-19  Score=180.18  Aligned_cols=200  Identities=16%  Similarity=0.111  Sum_probs=146.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCchh---HHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCC
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQR---AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK  153 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d  153 (380)
                      ..+++||||||+|+||.+++++|+++|+ +|+++.|+...   ..++.+.+...+             .++.++.+|++|
T Consensus       257 ~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g-------------~~v~~~~~Dvtd  323 (511)
T 2z5l_A          257 QPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHG-------------CEVVHAACDVAE  323 (511)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTT-------------CEEEEEECCSSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcC-------------CEEEEEEeCCCC
Confidence            3568999999999999999999999998 58899998743   344444443321             578999999999


Q ss_pred             hhcHHHHhcC--CCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHHHHc-CCCEEEEEccCCCCCCCCchhh
Q 016901          154 RVQIEPALGN--ASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAATIA-KVNHFIMVSSLGTNKFGFPAAI  224 (380)
Q Consensus       154 ~~~~~~a~~~--~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~~~~-~v~r~V~~SS~~~~~~~~~~~~  224 (380)
                      .+++.++++.  +|+||||||.......      ++...+++|+.|+.++.+++... +.++||++||.......     
T Consensus       324 ~~~v~~~~~~~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~-----  398 (511)
T 2z5l_A          324 RDALAALVTAYPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGN-----  398 (511)
T ss_dssp             HHHHHHHHHHSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCC-----
T ss_pred             HHHHHHHHhcCCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCC-----
Confidence            9999999864  9999999996543211      22334678999999999998776 77899999997543221     


Q ss_pred             hchhhHHHHHHHHHHHHHH---HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHHHHhCCC
Q 016901          225 LNLFWGVLLWKRKAEEALI---ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRS  300 (380)
Q Consensus       225 ~~~~~~Y~~sK~~~E~~l~---~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~~  300 (380)
                       .....|+.+|...+.+.+   ..|+++++|+||.+.+.+...... ...+.   ......++++|+++++..++..+.
T Consensus       399 -~g~~~YaaaKa~ld~la~~~~~~gi~v~sv~pG~~~~tgm~~~~~-~~~~~---~~g~~~l~~e~~a~~l~~al~~~~  472 (511)
T 2z5l_A          399 -AGQGAYAAANAALDALAERRRAAGLPATSVAWGLWGGGGMAAGAG-EESLS---RRGLRAMDPDAAVDALLGAMGRND  472 (511)
T ss_dssp             -TTBHHHHHHHHHHHHHHHHHHTTTCCCEEEEECCBCSTTCCCCHH-HHHHH---HHTBCCBCHHHHHHHHHHHHHHTC
T ss_pred             -CCCHHHHHHHHHHHHHHHHHHHcCCcEEEEECCcccCCccccccc-HHHHH---hcCCCCCCHHHHHHHHHHHHhCCC
Confidence             223579999999998775   579999999999984322110000 00000   011146999999999999998765

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.79  E-value=1.3e-18  Score=173.24  Aligned_cols=200  Identities=18%  Similarity=0.165  Sum_probs=146.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCch---hHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCCh
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQ---RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~  154 (380)
                      +++++|||||+|+||.++++.|+++|+ +|+++.|+..   ...++.+++...+             .++.++.+|++|.
T Consensus       238 ~~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g-------------~~v~~~~~Dvtd~  304 (496)
T 3mje_A          238 VHGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLG-------------VRVTIAACDAADR  304 (496)
T ss_dssp             CCSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTT-------------CEEEEEECCTTCH
T ss_pred             CCCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcC-------------CeEEEEEccCCCH
Confidence            458999999999999999999999998 7888888753   3445555444432             6799999999999


Q ss_pred             hcHHHHhc------CCCEEEEccccC-ccccC------CCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCCc
Q 016901          155 VQIEPALG------NASVVICCIGAS-EKEVF------DITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFP  221 (380)
Q Consensus       155 ~~~~~a~~------~~d~Vi~~Ag~~-~~~~~------~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~  221 (380)
                      +++.++++      .+|+||||||.. .....      ++...+++|+.|+.++.+++...+.++||++||.......  
T Consensus       305 ~~v~~~~~~i~~~g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~~g~--  382 (496)
T 3mje_A          305 EALAALLAELPEDAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAAVWGS--  382 (496)
T ss_dssp             HHHHHHHHTCCTTSCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHHTTC--
T ss_pred             HHHHHHHHHHHHhCCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHhcCCC--
Confidence            99998884      479999999975 32211      1233478999999999999998888899999996542211  


Q ss_pred             hhhhchhhHHHHHHHHHHHHHH---HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHHHHhC
Q 016901          222 AAILNLFWGVLLWKRKAEEALI---ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKN  298 (380)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~---~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~  298 (380)
                          .....|+.+|...+.+.+   ..|++++.|.||.+.+++..........+....   ...+++++.++++..++..
T Consensus       383 ----~g~~~YaAaKa~ldala~~~~~~Gi~v~sV~pG~w~~~gm~~~~~~~~~l~~~g---~~~l~pe~~~~~l~~~l~~  455 (496)
T 3mje_A          383 ----GGQPGYAAANAYLDALAEHRRSLGLTASSVAWGTWGEVGMATDPEVHDRLVRQG---VLAMEPEHALGALDQMLEN  455 (496)
T ss_dssp             ----TTCHHHHHHHHHHHHHHHHHHHTTCCCEEEEECEESSSCC------CHHHHHTT---EEEECHHHHHHHHHHHHHH
T ss_pred             ----CCcHHHHHHHHHHHHHHHHHHhcCCeEEEEECCcccCCccccChHHHHHHHhcC---CCCCCHHHHHHHHHHHHcC
Confidence                233579999999987765   589999999999987664321110000011100   0247999999999999987


Q ss_pred             CC
Q 016901          299 RS  300 (380)
Q Consensus       299 ~~  300 (380)
                      +.
T Consensus       456 ~~  457 (496)
T 3mje_A          456 DD  457 (496)
T ss_dssp             TC
T ss_pred             CC
Confidence            65

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.78  E-value=5e-18  Score=170.75  Aligned_cols=200  Identities=16%  Similarity=0.047  Sum_probs=145.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEE-eCCc-------------hhHHHHHHHHHhhhhcccccccCCCCCC
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFR-VRAG-VRSV-------------QRAENLVQSVKQMKLDGELANKGIQPVE  142 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~-V~~l-~R~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (380)
                      ..++++|||||+|+||.++++.|+++|++ |+++ .|+.             +..+++.+.+...+             .
T Consensus       249 ~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g-------------~  315 (525)
T 3qp9_A          249 QADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLG-------------A  315 (525)
T ss_dssp             CTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHT-------------C
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcC-------------C
Confidence            36789999999999999999999999987 5555 7874             33444444444332             5


Q ss_pred             ceEEEEcCCCChhcHHHHhc------CCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHHHHcC-----CC
Q 016901          143 MLELVECDLEKRVQIEPALG------NASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAATIAK-----VN  205 (380)
Q Consensus       143 ~v~~~~~Dl~d~~~~~~a~~------~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~~~~~-----v~  205 (380)
                      ++.++.+|++|.+++.++++      .+|.||||||.......      ++...+++|+.|+.++.+++....     .+
T Consensus       316 ~v~~~~~Dvtd~~~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~  395 (525)
T 3qp9_A          316 TATVVTCDLTDAEAAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPP  395 (525)
T ss_dssp             EEEEEECCTTSHHHHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCC
T ss_pred             EEEEEECCCCCHHHHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCC
Confidence            79999999999999998875      47999999997543222      223347899999999999998765     78


Q ss_pred             EEEEEccCCCCCCCCchhhhchhhHHHHHHHHHHHHHH---HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCC
Q 016901          206 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI---ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQ  282 (380)
Q Consensus       206 r~V~~SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~---~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~  282 (380)
                      +||++||.......      .....|+.+|...+.+.+   ..|++++.|.||.+.++.... ......+...   ....
T Consensus       396 ~iV~~SS~a~~~g~------~g~~~YaaaKa~l~~lA~~~~~~gi~v~sI~pG~~~tgm~~~-~~~~~~~~~~---g~~~  465 (525)
T 3qp9_A          396 VLVLFSSVAAIWGG------AGQGAYAAGTAFLDALAGQHRADGPTVTSVAWSPWEGSRVTE-GATGERLRRL---GLRP  465 (525)
T ss_dssp             EEEEEEEGGGTTCC------TTCHHHHHHHHHHHHHHTSCCSSCCEEEEEEECCBTTSGGGS-SHHHHHHHHT---TBCC
T ss_pred             EEEEECCHHHcCCC------CCCHHHHHHHHHHHHHHHHHHhCCCCEEEEECCccccccccc-hhhHHHHHhc---CCCC
Confidence            99999997653321      233579999999998875   378999999999994432110 0000001111   1135


Q ss_pred             CCHHHHHHHHHHHHhCCC
Q 016901          283 VSNLQVAELLACMAKNRS  300 (380)
Q Consensus       283 i~~~DvA~~i~~~l~~~~  300 (380)
                      ++++++++++..++..+.
T Consensus       466 l~pee~a~~l~~~l~~~~  483 (525)
T 3qp9_A          466 LAPATALTALDTALGHGD  483 (525)
T ss_dssp             BCHHHHHHHHHHHHHHTC
T ss_pred             CCHHHHHHHHHHHHhCCC
Confidence            899999999999998765

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.78  E-value=1.4e-18  Score=178.15  Aligned_cols=204  Identities=15%  Similarity=0.098  Sum_probs=140.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC---------CchhHHHHHHHHHhhhhcccccccCCCCCCceEEE
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVR---------SVQRAENLVQSVKQMKLDGELANKGIQPVEMLELV  147 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  147 (380)
                      .+++|++|||||+|+||+++++.|+++|++|++++|         +.+..+.+.++++..+             ..   +
T Consensus        16 ~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~-------------~~---~   79 (613)
T 3oml_A           16 RYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAG-------------GE---A   79 (613)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTT-------------CC---E
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhC-------------Ce---E
Confidence            457899999999999999999999999999999987         5555555555554321             12   2


Q ss_pred             EcCCCChhcHHHHhc-------CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHH----HHcCCCEEEEE
Q 016901          148 ECDLEKRVQIEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKVNHFIMV  210 (380)
Q Consensus       148 ~~Dl~d~~~~~~a~~-------~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~  210 (380)
                      .+|++|.++++++++       .+|+||||||......      .++...+++|+.|+.++++++    ++.+.++||++
T Consensus        80 ~~D~~d~~~~~~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~i  159 (613)
T 3oml_A           80 VADYNSVIDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMT  159 (613)
T ss_dssp             EECCCCGGGHHHHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred             EEEeCCHHHHHHHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEE
Confidence            479999888777764       6899999999753322      123344789999999998887    55666799999


Q ss_pred             ccCCCCCCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCC
Q 016901          211 SSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQV  283 (380)
Q Consensus       211 SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i  283 (380)
                      ||......      ......|+.+|.+.+.+.+       .+|++++.|.||.+......      . .   .......+
T Consensus       160 sS~a~~~~------~~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~t~~~~~------~-~---~~~~~~~~  223 (613)
T 3oml_A          160 SSNSGIYG------NFGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAASRMTEG------I-L---PDILFNEL  223 (613)
T ss_dssp             CCHHHHHC------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC------CC------C-C---CHHHHTTC
T ss_pred             CCHHHcCC------CCCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCCChhhhh------c-c---chhhhhcC
Confidence            99654211      1234579999999997765       36899999999975321110      0 0   01112457


Q ss_pred             CHHHHHHHHHHHHhCCCCccCcEEEEecC
Q 016901          284 SNLQVAELLACMAKNRSLSYCKVVEVIAE  312 (380)
Q Consensus       284 ~~~DvA~~i~~~l~~~~~~~~~~~ni~~~  312 (380)
                      .++|+|.+++.++.+.....|++|++.+|
T Consensus       224 ~pedvA~~v~~L~s~~~~~tG~~i~vdGG  252 (613)
T 3oml_A          224 KPKLIAPVVAYLCHESCEDNGSYIESAAG  252 (613)
T ss_dssp             CGGGTHHHHHHTTSTTCCCCSCEEEEETT
T ss_pred             CHHHHHHHHHHhcCCCcCCCceEEEECCC
Confidence            89999999999998765567889988775

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.76  E-value=1.4e-18  Score=162.50  Aligned_cols=228  Identities=12%  Similarity=0.064  Sum_probs=140.2

Q ss_pred             CCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCC-CceEEEEcC----
Q 016901           78 KDDNLAFVAGAT--GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPV-EMLELVECD----  150 (380)
Q Consensus        78 ~~~~~vlVtGat--G~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~D----  150 (380)
                      +++|++|||||+  |+||++++++|+++|++|++++|++..... ........+.... ....... .....+.+|    
T Consensus         6 l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~   83 (297)
T 1d7o_A            6 LRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIF-ETSLRRGKFDQSR-VLPDGSLMEIKKVYPLDAVFD   83 (297)
T ss_dssp             CTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHH-HHHHHTTTTTGGG-BCTTSSBCCEEEEEEECTTCC
T ss_pred             cCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhh-hhhhhhhHhhhhh-hhccccccccccccccceecc
Confidence            467899999999  999999999999999999999886421100 0000000000000 0000000 012333333    


Q ss_pred             ----CC----C--------hhcHHHHh-------cCCCEEEEccccCc---cc-----cCCCCCcchhhHHHHHHHHHHH
Q 016901          151 ----LE----K--------RVQIEPAL-------GNASVVICCIGASE---KE-----VFDITGPYRIDFQATKNLVDAA  199 (380)
Q Consensus       151 ----l~----d--------~~~~~~a~-------~~~d~Vi~~Ag~~~---~~-----~~~~~~~~~~nv~g~~~ll~a~  199 (380)
                          +.    |        .+++++++       +++|+||||||...   ..     ..++...+++|+.|+.++++++
T Consensus        84 ~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~  163 (297)
T 1d7o_A           84 NPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHF  163 (297)
T ss_dssp             SGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             chhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHH
Confidence                22    2        44555544       47999999998532   11     1123345789999999999998


Q ss_pred             HHcC--CCEEEEEccCCCCCCCCchhhhchh-hHHHHHHHHHHHHHH--------HCCCCEEEEecCcccCCCcccccc-
Q 016901          200 TIAK--VNHFIMVSSLGTNKFGFPAAILNLF-WGVLLWKRKAEEALI--------ASGLPYTIVRPGGMERPTDAYKET-  267 (380)
Q Consensus       200 ~~~~--v~r~V~~SS~~~~~~~~~~~~~~~~-~~Y~~sK~~~E~~l~--------~~g~~~~ivRpg~v~gp~~~~~~~-  267 (380)
                      ...-  -++||++||.......      ... ..|+.+|.+.+.+.+        .+|+++++|+||++.+|....... 
T Consensus       164 ~~~m~~~g~iv~isS~~~~~~~------~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~~~  237 (297)
T 1d7o_A          164 LPIMNPGGASISLTYIASERII------PGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFI  237 (297)
T ss_dssp             GGGEEEEEEEEEEECGGGTSCC------TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHH
T ss_pred             HHHhccCceEEEEeccccccCC------CCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhcccc
Confidence            7531  2589999997653211      112 369999999987654        269999999999999885321100 


Q ss_pred             cce-eeccCCcccCCCCCHHHHHHHHHHHHhCC-CCccCcEEEEecCC
Q 016901          268 HNI-TLSQEDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET  313 (380)
Q Consensus       268 ~~~-~~~~~~~~~~~~i~~~DvA~~i~~~l~~~-~~~~~~~~ni~~~~  313 (380)
                      ... .........+.+.+++|+|++++.++... ....|+++++.++.
T Consensus       238 ~~~~~~~~~~~p~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~  285 (297)
T 1d7o_A          238 DTMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGL  285 (297)
T ss_dssp             HHHHHHHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHhhccCCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            000 00000112234679999999999998753 33468899988874

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.75  E-value=1.7e-19  Score=171.30  Aligned_cols=168  Identities=14%  Similarity=0.040  Sum_probs=119.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-------eEEEEeCCch--hHHHHHHHHHhhhhcccccccCCCCCCceEEEEc
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGF-------RVRAGVRSVQ--RAENLVQSVKQMKLDGELANKGIQPVEMLELVEC  149 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~-------~V~~l~R~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  149 (380)
                      +.|+|+||||+||||++++..|+++|+       +|+++++...  +.......+..               ..+.++ +
T Consensus         3 ~~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~---------------~~~~~~-~   66 (327)
T 1y7t_A            3 APVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELED---------------CAFPLL-A   66 (327)
T ss_dssp             CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHT---------------TTCTTE-E
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhc---------------cccccc-C
Confidence            457899999999999999999999996       8999988642  22221111110               112233 6


Q ss_pred             CCCChhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcC-CC-EEEEEccCCC-CCCCCch-h-h
Q 016901          150 DLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK-VN-HFIMVSSLGT-NKFGFPA-A-I  224 (380)
Q Consensus       150 Dl~d~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~-v~-r~V~~SS~~~-~~~~~~~-~-~  224 (380)
                      |+.+.+++.++++++|+|||+||.......+....+++|+.+++++++++++.+ ++ +++++|+-.. ..+...+ . .
T Consensus        67 di~~~~~~~~a~~~~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~~~~~~~~~~  146 (327)
T 1y7t_A           67 GLEATDDPKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNALIAYKNAPG  146 (327)
T ss_dssp             EEEEESCHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCTT
T ss_pred             CeEeccChHHHhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhHHHHHHHcCC
Confidence            887777888999999999999997643333334568899999999999999986 65 7887776321 0000000 0 1


Q ss_pred             hchhhHHHHHHHHHHHHHH----HCCCCEEEEecCcccCCCc
Q 016901          225 LNLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTD  262 (380)
Q Consensus       225 ~~~~~~Y~~sK~~~E~~l~----~~g~~~~ivRpg~v~gp~~  262 (380)
                      .++...|+.+|+..|++++    ..|+++++||+++||||++
T Consensus       147 ~~p~~~yg~tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~  188 (327)
T 1y7t_A          147 LNPRNFTAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHS  188 (327)
T ss_dssp             SCGGGEEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSS
T ss_pred             CChhheeccchHHHHHHHHHHHHHhCcChhheeeeEEEcCCC
Confidence            2344569999999998764    4699999999999999975

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.74  E-value=9.7e-18  Score=158.52  Aligned_cols=221  Identities=12%  Similarity=0.066  Sum_probs=123.5

Q ss_pred             CCCCeEEEEcC--CChHHHHHHHHHHHCCCeEEEEeCCc-----------hhHHHH-----------HHHHHhhhhcccc
Q 016901           78 KDDNLAFVAGA--TGKVGSRTVRELLKLGFRVRAGVRSV-----------QRAENL-----------VQSVKQMKLDGEL  133 (380)
Q Consensus        78 ~~~~~vlVtGa--tG~iG~~lv~~Ll~~G~~V~~l~R~~-----------~~~~~~-----------~~~~~~~~~~~~~  133 (380)
                      ++++++|||||  +|+||+++++.|+++|++|++++|++           ++....           .+++...      
T Consensus         7 l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------   80 (319)
T 2ptg_A            7 LRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEK------   80 (319)
T ss_dssp             CTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC----------------------------------
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhc------
Confidence            46789999999  89999999999999999999998753           111111           0000000      


Q ss_pred             cccCCCCCCceEEEEcCC------------CC--------hhcHHHHh-------cCCCEEEEccccCc--ccc------
Q 016901          134 ANKGIQPVEMLELVECDL------------EK--------RVQIEPAL-------GNASVVICCIGASE--KEV------  178 (380)
Q Consensus       134 ~~~~~~~~~~v~~~~~Dl------------~d--------~~~~~~a~-------~~~d~Vi~~Ag~~~--~~~------  178 (380)
                         +. ......++.+|+            +|        .+++++++       +++|+||||||...  ...      
T Consensus        81 ---~~-~~~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~  156 (319)
T 2ptg_A           81 ---PV-DLVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSR  156 (319)
T ss_dssp             --------CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCH
T ss_pred             ---cc-cccccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCH
Confidence               00 000134444442            22        33555544       47999999998542  111      


Q ss_pred             CCCCCcchhhHHHHHHHHHHHHHcC--CCEEEEEccCCCCCCCCchhhhchh-hHHHHHHHHHHHHHH-------H-CCC
Q 016901          179 FDITGPYRIDFQATKNLVDAATIAK--VNHFIMVSSLGTNKFGFPAAILNLF-WGVLLWKRKAEEALI-------A-SGL  247 (380)
Q Consensus       179 ~~~~~~~~~nv~g~~~ll~a~~~~~--v~r~V~~SS~~~~~~~~~~~~~~~~-~~Y~~sK~~~E~~l~-------~-~g~  247 (380)
                      .++...+++|+.|+.++++++...-  -++||++||.......      ... ..|+.+|.+.+.+.+       . +|+
T Consensus       157 ~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~------~~~~~~Y~asKaal~~l~~~la~el~~~~gI  230 (319)
T 2ptg_A          157 KGYLAAVSSSSYSFVSLLQHFLPLMKEGGSALALSYIASEKVI------PGYGGGMSSAKAALESDCRTLAFEAGRARAV  230 (319)
T ss_dssp             HHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEEECC------------------------THHHHHHHHHHHHHHHCC
T ss_pred             HHHHHHHhHhhHHHHHHHHHHHHHHhcCceEEEEecccccccc------CccchhhHHHHHHHHHHHHHHHHHhccccCe
Confidence            1233447899999999999987541  1689999997653211      122 369999998886654       2 699


Q ss_pred             CEEEEecCcccCCCcccccc--c-ce--ee---ccCCcccCCCCCHHHHHHHHHHHHhCC-CCccCcEEEEecCCC
Q 016901          248 PYTIVRPGGMERPTDAYKET--H-NI--TL---SQEDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAETT  314 (380)
Q Consensus       248 ~~~ivRpg~v~gp~~~~~~~--~-~~--~~---~~~~~~~~~~i~~~DvA~~i~~~l~~~-~~~~~~~~ni~~~~~  314 (380)
                      ++++|+||++.++.......  . ..  ..   .......+.+..++|+|++++.++... ....|+++.+-++..
T Consensus       231 rvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~  306 (319)
T 2ptg_A          231 RVNCISAGPLKSRAASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDNGLH  306 (319)
T ss_dssp             EEEEEEECCCC-------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTCT
T ss_pred             eEEEEeeCCccChhhhhcccccchhhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECCCce
Confidence            99999999998774211100  0 00  00   001112234679999999999998753 335788998887753

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.73  E-value=8.2e-18  Score=158.75  Aligned_cols=222  Identities=13%  Similarity=0.095  Sum_probs=139.1

Q ss_pred             CCCCeEEEEcC--CChHHHHHHHHHHHCCCeEEEEeCCchhH------H-HHHHHHHhhhhcccccccCCCCCCceEEEE
Q 016901           78 KDDNLAFVAGA--TGKVGSRTVRELLKLGFRVRAGVRSVQRA------E-NLVQSVKQMKLDGELANKGIQPVEMLELVE  148 (380)
Q Consensus        78 ~~~~~vlVtGa--tG~iG~~lv~~Ll~~G~~V~~l~R~~~~~------~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  148 (380)
                      +++|++|||||  +|+||++++++|+++|++|++++|++...      . ...+.+..+.       .+. ....+.++.
T Consensus         7 l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~-------~~~-~~~~~~~~~   78 (315)
T 2o2s_A            7 LRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLP-------DGS-LIEFAGVYP   78 (315)
T ss_dssp             CTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCT-------TSC-BCCCSCEEE
T ss_pred             CCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhh-------ccc-ccccccccc
Confidence            46789999999  89999999999999999999998864210      0 0000011100       000 000123444


Q ss_pred             cC------------CCC--------hhcHHHHh-------cCCCEEEEccccCc---cc-----cCCCCCcchhhHHHHH
Q 016901          149 CD------------LEK--------RVQIEPAL-------GNASVVICCIGASE---KE-----VFDITGPYRIDFQATK  193 (380)
Q Consensus       149 ~D------------l~d--------~~~~~~a~-------~~~d~Vi~~Ag~~~---~~-----~~~~~~~~~~nv~g~~  193 (380)
                      +|            ++|        .+++++++       +++|+||||||...   ..     ..++...+++|+.|+.
T Consensus        79 ~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~  158 (315)
T 2o2s_A           79 LDAAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFV  158 (315)
T ss_dssp             CCTTCSSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHH
T ss_pred             ccccccccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHH
Confidence            44            332        44555554       47999999998542   11     1123344789999999


Q ss_pred             HHHHHHHHcC--CCEEEEEccCCCCCCCCchhhhchh-hHHHHHHHHHHHHHH--------HCCCCEEEEecCcccCCCc
Q 016901          194 NLVDAATIAK--VNHFIMVSSLGTNKFGFPAAILNLF-WGVLLWKRKAEEALI--------ASGLPYTIVRPGGMERPTD  262 (380)
Q Consensus       194 ~ll~a~~~~~--v~r~V~~SS~~~~~~~~~~~~~~~~-~~Y~~sK~~~E~~l~--------~~g~~~~ivRpg~v~gp~~  262 (380)
                      ++++++...-  -++||++||.......      ... ..|+.+|.+.+.+.+        .+|++++.|+||+|.++..
T Consensus       159 ~l~~~~~~~m~~~g~Iv~isS~~~~~~~------~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~  232 (315)
T 2o2s_A          159 SLLQHFGPIMNEGGSAVTLSYLAAERVV------PGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAA  232 (315)
T ss_dssp             HHHHHHSTTEEEEEEEEEEEEGGGTSCC------TTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHH
T ss_pred             HHHHHHHHHHhcCCEEEEEecccccccC------CCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhh
Confidence            9999986431  1589999997653221      111 369999999887654        2699999999999987632


Q ss_pred             ccccc-c--ce--ee---ccCCcccCCCCCHHHHHHHHHHHHhCC-CCccCcEEEEecCC
Q 016901          263 AYKET-H--NI--TL---SQEDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET  313 (380)
Q Consensus       263 ~~~~~-~--~~--~~---~~~~~~~~~~i~~~DvA~~i~~~l~~~-~~~~~~~~ni~~~~  313 (380)
                      ..... .  ..  ..   .......+.+..++|+|++++.++... ....|+++.+-++.
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~  292 (315)
T 2o2s_A          233 SAIGKSGEKSFIDYAIDYSYNNAPLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGL  292 (315)
T ss_dssp             HHTTCSSSSCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             hhccccccchhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCe
Confidence            11000 0  00  00   000112334679999999999998753 33568888887774

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.72  E-value=1.6e-16  Score=150.88  Aligned_cols=228  Identities=11%  Similarity=0.131  Sum_probs=145.2

Q ss_pred             CCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCCh--h
Q 016901           80 DNLAFVAGATG--KVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR--V  155 (380)
Q Consensus        80 ~~~vlVtGatG--~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~--~  155 (380)
                      +|+++||||++  +||.+++++|+++|++|++..|++...- ..+.....................+.++.+|+++.  +
T Consensus         2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~   80 (329)
T 3lt0_A            2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNI-FMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHH-HHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred             CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccc-cccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence            57899999875  9999999999999999998887752100 00001111100000000011124578899999877  6


Q ss_pred             ------------------cHHHHh-------cCCCEEEEccccCc--cc------cCCCCCcchhhHHHHHHHHHHHHHc
Q 016901          156 ------------------QIEPAL-------GNASVVICCIGASE--KE------VFDITGPYRIDFQATKNLVDAATIA  202 (380)
Q Consensus       156 ------------------~~~~a~-------~~~d~Vi~~Ag~~~--~~------~~~~~~~~~~nv~g~~~ll~a~~~~  202 (380)
                                        ++.+++       +.+|++|||||...  ..      ..++...+++|+.|+.++++++...
T Consensus        81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~  160 (329)
T 3lt0_A           81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             hhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence                              666655       46899999999531  11      1123445889999999999988643


Q ss_pred             C--CCEEEEEccCCCCCCCCchhhhchhh-HHHHHHHHHHHHHH-------H-CCCCEEEEecCcccCCCcccccc-c--
Q 016901          203 K--VNHFIMVSSLGTNKFGFPAAILNLFW-GVLLWKRKAEEALI-------A-SGLPYTIVRPGGMERPTDAYKET-H--  268 (380)
Q Consensus       203 ~--v~r~V~~SS~~~~~~~~~~~~~~~~~-~Y~~sK~~~E~~l~-------~-~g~~~~ivRpg~v~gp~~~~~~~-~--  268 (380)
                      -  -++||++||.......      .... .|+.+|++.+.+.+       . +|++++.|.||+|.++....... .  
T Consensus       161 m~~~g~Iv~isS~~~~~~~------~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~  234 (329)
T 3lt0_A          161 MKPQSSIISLTYHASQKVV------PGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNT  234 (329)
T ss_dssp             EEEEEEEEEEECGGGTSCC------TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHTCC-----
T ss_pred             HhhCCeEEEEeCccccCCC------CcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhHhhhhhhccc
Confidence            1  1589999997653321      1222 69999999987654       3 69999999999997653211000 0  


Q ss_pred             ------------------------c------------------eeeccCCcccCCCCCHHHHHHHHHHHHhCC-CCccCc
Q 016901          269 ------------------------N------------------ITLSQEDTLFGGQVSNLQVAELLACMAKNR-SLSYCK  305 (380)
Q Consensus       269 ------------------------~------------------~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~-~~~~~~  305 (380)
                                              .                  ..........+.+..++|+|++++.++... ....|+
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~fL~s~~a~~itG~  314 (329)
T 3lt0_A          235 YENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESRAITGQ  314 (329)
T ss_dssp             -------------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             ccccccccccccccccchhhcccccchhhhhhhhcccchhHHHHHHHhhcCcccCcCCHHHHHHHHHHHhCchhccccCc
Confidence                                    0                  000000112234679999999999999754 335788


Q ss_pred             EEEEecCCC
Q 016901          306 VVEVIAETT  314 (380)
Q Consensus       306 ~~ni~~~~~  314 (380)
                      ++.+-+|..
T Consensus       315 ~i~vdGG~~  323 (329)
T 3lt0_A          315 TIYVDNGLN  323 (329)
T ss_dssp             EEEESTTGG
T ss_pred             EEEEcCCee
Confidence            888887753

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.70  E-value=3.4e-16  Score=159.88  Aligned_cols=223  Identities=16%  Similarity=0.088  Sum_probs=149.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCC-CChh
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDL-EKRV  155 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl-~d~~  155 (380)
                      .+++|+++||||+++||+++++.|+++|++|++.+|+.  .+++.+++...+             .++..+.+|+ ++.+
T Consensus       319 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~--~~~~~~~i~~~g-------------~~~~~~~~Dv~~~~~  383 (604)
T 2et6_A          319 SLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD--ATKTVDEIKAAG-------------GEAWPDQHDVAKDSE  383 (604)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC--CHHHHHHHHHTT-------------CEEEEECCCHHHHHH
T ss_pred             ccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCcc--HHHHHHHHHhcC-------------CeEEEEEcChHHHHH
Confidence            45678999999999999999999999999999988632  233334343321             4567788898 5543


Q ss_pred             cH----HHHhcCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCCCCc
Q 016901          156 QI----EPALGNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGFP  221 (380)
Q Consensus       156 ~~----~~a~~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~~~~  221 (380)
                      .+    .+.++.+|++|||||......      .++...+++|+.|+.++.+++    ++.+-++||++||...... . 
T Consensus       384 ~~~~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~-~-  461 (604)
T 2et6_A          384 AIIKNVIDKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYG-N-  461 (604)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSC-C-
T ss_pred             HHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccC-C-
Confidence            32    233468999999999653221      123344889999998887776    3455579999999654221 1 


Q ss_pred             hhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHH
Q 016901          222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLAC  294 (380)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~  294 (380)
                          .....|+.+|.....+.+       .+|++++.|.||. ..+...     .. ...  . ......++|+|.+++.
T Consensus       462 ----~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~m~~-----~~-~~~--~-~~~~~~pe~vA~~v~~  527 (604)
T 2et6_A          462 ----FGQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTL-----SI-MRE--Q-DKNLYHADQVAPLLVY  527 (604)
T ss_dssp             ----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC------------------CCSSCGGGTHHHHHH
T ss_pred             ----CCChhHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCcccc-----cc-Cch--h-hccCCCHHHHHHHHHH
Confidence                123579999999987754       3799999999994 433210     00 000  0 1134689999999999


Q ss_pred             HHhCCCCccCcEEEEecCC-----------------CCCcchHHHHHHhcCCC
Q 016901          295 MAKNRSLSYCKVVEVIAET-----------------TAPLTPMEELLAKIPSQ  330 (380)
Q Consensus       295 ~l~~~~~~~~~~~ni~~~~-----------------~~s~~~~~e~~~~~~~~  330 (380)
                      ++.......|+++.+.+|.                 .++..++.+.+.++...
T Consensus       528 L~s~~~~itG~~~~vdGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  580 (604)
T 2et6_A          528 LGTDDVPVTGETFEIGGGWIGNTRWQRAKGAVSHDEHTTVEFIKEHLNEITDF  580 (604)
T ss_dssp             TTSTTCCCCSCEEEEETTEEEEEEEEECCCEECCSSSCCHHHHHHHHHHHTCC
T ss_pred             HhCCccCCCCcEEEECCCeeEeeeeeccccccCCCCCCCHHHHHHHHHHHhcc
Confidence            8876443567888877752                 23556666666666544

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.68  E-value=1.6e-15  Score=154.90  Aligned_cols=221  Identities=15%  Similarity=0.094  Sum_probs=147.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCc---------hhHHHHHHHHHhhhhcccccccCCCCCCceEEEE
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV---------QRAENLVQSVKQMKLDGELANKGIQPVEMLELVE  148 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  148 (380)
                      +++|+++||||+++||+++++.|+++|++|++.+|+.         +..+++.+++...+             .++   .
T Consensus         6 l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g-------------~~~---~   69 (604)
T 2et6_A            6 FKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNG-------------GVA---V   69 (604)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTT-------------CEE---E
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcC-------------CeE---E
Confidence            4678999999999999999999999999999988765         44555555444321             222   2


Q ss_pred             cCCCChhcHHHH-------hcCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEc
Q 016901          149 CDLEKRVQIEPA-------LGNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVS  211 (380)
Q Consensus       149 ~Dl~d~~~~~~a-------~~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~S  211 (380)
                      +|++|.++++++       ++.+|++|||||......      .++...+++|+.|+.++++++    ++.+-++||++|
T Consensus        70 ~d~~d~~~~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnis  149 (604)
T 2et6_A           70 ADYNNVLDGDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTS  149 (604)
T ss_dssp             EECCCTTCHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred             EEcCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEC
Confidence            466665444333       467999999999653221      123345889999988887765    345557999999


Q ss_pred             cCCCCCCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCC
Q 016901          212 SLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVS  284 (380)
Q Consensus       212 S~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~  284 (380)
                      |......      ......|+.+|.....+.+       .+|++++.|.|| +..+..   ..  . ..  .. ......
T Consensus       150 S~ag~~~------~~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T~m~---~~--~-~~--~~-~~~~~~  213 (604)
T 2et6_A          150 SPAGLYG------NFGQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSRMT---ES--I-MP--PP-MLEKLG  213 (604)
T ss_dssp             CHHHHHC------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCHHH---HT--T-SC--HH-HHTTCS
T ss_pred             CHHHcCC------CCCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcCccc---cc--c-CC--hh-hhccCC
Confidence            9644211      1123569999999987765       379999999997 332210   00  0 00  00 112468


Q ss_pred             HHHHHHHHHHHHhCCCCccCcEEEEecC------------------CCCCcchHHHHHHhcCCC
Q 016901          285 NLQVAELLACMAKNRSLSYCKVVEVIAE------------------TTAPLTPMEELLAKIPSQ  330 (380)
Q Consensus       285 ~~DvA~~i~~~l~~~~~~~~~~~ni~~~------------------~~~s~~~~~e~~~~~~~~  330 (380)
                      ++|+|.+++.++.......|+++.+.++                  ...+..++.+.+.++...
T Consensus       214 pe~vA~~v~~L~s~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  277 (604)
T 2et6_A          214 PEKVAPLVLYLSSAENELTGQFFEVAAGFYAQIRWERSGGVLFKPDQSFTAEVVAKRFSEILDY  277 (604)
T ss_dssp             HHHHHHHHHHHTSSSCCCCSCEEEEETTEEEEEEEEECCCEECCSSTTCCHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHHhCCcccCCCCEEEECCCeEEEEEEEeccceecCCCCCCCHHHHHHHHHHhhch
Confidence            9999999999998765556888887765                  223456777777766543

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.68  E-value=1.9e-16  Score=175.10  Aligned_cols=212  Identities=13%  Similarity=0.006  Sum_probs=144.4

Q ss_pred             CCCCeEEEEcCCCh-HHHHHHHHHHHCCCeEEEE-eCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh
Q 016901           78 KDDNLAFVAGATGK-VGSRTVRELLKLGFRVRAG-VRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (380)
Q Consensus        78 ~~~~~vlVtGatG~-iG~~lv~~Ll~~G~~V~~l-~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~  155 (380)
                      ++++++|||||+|+ ||.++++.|+++|++|+++ .|+.++..+..+.+.... .        ....++.++.+|++|.+
T Consensus       673 l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~-~--------~~g~~v~~v~~DVsd~~  743 (1887)
T 2uv8_A          673 FKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKY-G--------AKGSTLIVVPFNQGSKQ  743 (1887)
T ss_dssp             CTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHH-C--------CTTCEEEEEECCTTCHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHh-h--------cCCCeEEEEEecCCCHH
Confidence            56789999999998 9999999999999999998 577776665554442210 0        00156889999999998


Q ss_pred             cHHHHhc-------------CCCEEEEccccCccc-cC--------CCCCcchhhHHHHHHHHHHHHHcC------CCEE
Q 016901          156 QIEPALG-------------NASVVICCIGASEKE-VF--------DITGPYRIDFQATKNLVDAATIAK------VNHF  207 (380)
Q Consensus       156 ~~~~a~~-------------~~d~Vi~~Ag~~~~~-~~--------~~~~~~~~nv~g~~~ll~a~~~~~------v~r~  207 (380)
                      +++++++             .+|+||||||..... ..        ++...+++|+.|+.+++++++...      -++|
T Consensus       744 sV~alv~~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~I  823 (1887)
T 2uv8_A          744 DVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVI  823 (1887)
T ss_dssp             HHHHHHHHHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEE
T ss_pred             HHHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEE
Confidence            8877652             589999999965332 11        123458899999999999884322      2589


Q ss_pred             EEEccCCCCCCCCchhhhchhhHHHHHHHHHHHH-HH----H--CCCCEEEEecCcccC-CCcccccccceeeccCCccc
Q 016901          208 IMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEA-LI----A--SGLPYTIVRPGGMER-PTDAYKETHNITLSQEDTLF  279 (380)
Q Consensus       208 V~~SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~-l~----~--~g~~~~ivRpg~v~g-p~~~~~~~~~~~~~~~~~~~  279 (380)
                      |++||......        ....|+.+|.+.+.+ .+    +  ..++++.|+||++.+ +..............   ..
T Consensus       824 VnISS~ag~~g--------g~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~tT~m~~~~~~~~~~~~~---~p  892 (1887)
T 2uv8_A          824 LPMSPNHGTFG--------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSANNIIAEGIEK---MG  892 (1887)
T ss_dssp             EEECSCTTCSS--------CBTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEECC-----CCTTHHHHHT---TS
T ss_pred             EEEcChHhccC--------CCchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEecccccccccccchhHHHHHHh---cC
Confidence            99999765332        224699999999887 33    1  228999999999984 321100000000000   11


Q ss_pred             CCCCCHHHHHHHHHHHHhCC--CCccCcEEEE
Q 016901          280 GGQVSNLQVAELLACMAKNR--SLSYCKVVEV  309 (380)
Q Consensus       280 ~~~i~~~DvA~~i~~~l~~~--~~~~~~~~ni  309 (380)
                      ....+++|+|.+++.++...  ....|..+.+
T Consensus       893 lr~~sPEEVA~avlfLaSd~~as~iTGq~I~V  924 (1887)
T 2uv8_A          893 VRTFSQKEMAFNLLGLLTPEVVELCQKSPVMA  924 (1887)
T ss_dssp             CCCEEHHHHHHHHHGGGSHHHHHHHHHSCEEE
T ss_pred             CCCCCHHHHHHHHHHHhCCCccccccCcEEEE
Confidence            13468999999999998764  1234667766

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.67  E-value=8.4e-17  Score=155.45  Aligned_cols=203  Identities=11%  Similarity=0.031  Sum_probs=131.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHH-CCCeEEEEeCCchhHH------------HHHHHHHhhhhcccccccCCCCCCceE
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLK-LGFRVRAGVRSVQRAE------------NLVQSVKQMKLDGELANKGIQPVEMLE  145 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~-~G~~V~~l~R~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~v~  145 (380)
                      .+|++|||||+++||+++++.|++ .|++|+++.|+.+..+            .+.+.++..+             .++.
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G-------------~~a~  126 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAG-------------LYSK  126 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTT-------------CCEE
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcC-------------CcEE
Confidence            578999999999999999999999 9999999998765322            1223333221             4688


Q ss_pred             EEEcCCCChhcHHHHh--------cCCCEEEEccccC-------------ccccC-------------------------
Q 016901          146 LVECDLEKRVQIEPAL--------GNASVVICCIGAS-------------EKEVF-------------------------  179 (380)
Q Consensus       146 ~~~~Dl~d~~~~~~a~--------~~~d~Vi~~Ag~~-------------~~~~~-------------------------  179 (380)
                      .+.+|++|++++++++        +.+|++|||||..             .....                         
T Consensus       127 ~i~~Dvtd~~~v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t  206 (422)
T 3s8m_A          127 SINGDAFSDAARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPAS  206 (422)
T ss_dssp             EEESCTTSHHHHHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCC
T ss_pred             EEEecCCCHHHHHHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCC
Confidence            8999999987766554        5689999999862             00000                         


Q ss_pred             --CCCCcchhhHHHHH-HHHHHHHHcC----CCEEEEEccCCCCCCCCchhhhchh--hHHHHHHHHHHHHHH-------
Q 016901          180 --DITGPYRIDFQATK-NLVDAATIAK----VNHFIMVSSLGTNKFGFPAAILNLF--WGVLLWKRKAEEALI-------  243 (380)
Q Consensus       180 --~~~~~~~~nv~g~~-~ll~a~~~~~----v~r~V~~SS~~~~~~~~~~~~~~~~--~~Y~~sK~~~E~~l~-------  243 (380)
                        ++...+++|..+.. .+++++....    -.++|++||.+...      .....  ..|+.+|..++.+.+       
T Consensus       207 ~e~~~~~v~Vn~~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~------~~p~~~~~aY~ASKaAl~~lTrsLA~Ela  280 (422)
T 3s8m_A          207 AQEIEDTITVMGGQDWELWIDALEGAGVLADGARSVAFSYIGTEI------TWPIYWHGALGKAKVDLDRTAQRLNARLA  280 (422)
T ss_dssp             HHHHHHHHHHHSSHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGG------GHHHHTSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhchhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhc------cCCCccchHHHHHHHHHHHHHHHHHHHhC
Confidence              01111344544443 5566654432    24899999986522      11223  579999999997765       


Q ss_pred             HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHHHHhCCC
Q 016901          244 ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRS  300 (380)
Q Consensus       244 ~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~~  300 (380)
                      ..|+++++|.||.|..+...................+..-..+|+|+.+.+++.+.-
T Consensus       281 ~~GIRVNaVaPG~i~T~~~~~ip~~~~~~~~~~~~m~r~G~pEdva~~v~~L~sd~l  337 (422)
T 3s8m_A          281 KHGGGANVAVLKSVVTQASAAIPVMPLYISMVYKIMKEKGLHEGTIEQLDRLFRERL  337 (422)
T ss_dssp             TTTCEEEEEEECCCCCTTGGGSTHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHTT
T ss_pred             ccCEEEEEEEcCCCcChhhhcCCCChHHHHHHHhhhcCCcChHHHHHHHHHHhcchh
Confidence            379999999999998874321110000000000122234556789999999887643

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.66  E-value=1.1e-16  Score=153.34  Aligned_cols=201  Identities=12%  Similarity=0.028  Sum_probs=131.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHH-CCCeEEEEeCCchhHH------------HHHHHHHhhhhcccccccCCCCCCceE
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLK-LGFRVRAGVRSVQRAE------------NLVQSVKQMKLDGELANKGIQPVEMLE  145 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~-~G~~V~~l~R~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~v~  145 (380)
                      .+|++|||||+++||+++++.|++ .|++|+++.|+.+...            ...+.++..+             .++.
T Consensus        46 ~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G-------------~~a~  112 (405)
T 3zu3_A           46 GPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKG-------------LYAK  112 (405)
T ss_dssp             CCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTT-------------CCEE
T ss_pred             CCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcC-------------CceE
Confidence            678999999999999999999999 9999999988754321            1222222221             4678


Q ss_pred             EEEcCCCChhcHHHHh-------cCCCEEEEccccCc-------------cccC--------------------------
Q 016901          146 LVECDLEKRVQIEPAL-------GNASVVICCIGASE-------------KEVF--------------------------  179 (380)
Q Consensus       146 ~~~~Dl~d~~~~~~a~-------~~~d~Vi~~Ag~~~-------------~~~~--------------------------  179 (380)
                      .+.+|++|.+++++++       +.+|++|||||...             ....                          
T Consensus       113 ~i~~Dvtd~~~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~  192 (405)
T 3zu3_A          113 SINGDAFSDEIKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQ  192 (405)
T ss_dssp             EEESCTTSHHHHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCH
T ss_pred             EEECCCCCHHHHHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCH
Confidence            8999999988777665       57999999998641             0000                          


Q ss_pred             -CCCCcchhhHHHHH-HHHHHHHHcC----CCEEEEEccCCCCCCCCchhhhchh--hHHHHHHHHHHHHHH-------H
Q 016901          180 -DITGPYRIDFQATK-NLVDAATIAK----VNHFIMVSSLGTNKFGFPAAILNLF--WGVLLWKRKAEEALI-------A  244 (380)
Q Consensus       180 -~~~~~~~~nv~g~~-~ll~a~~~~~----v~r~V~~SS~~~~~~~~~~~~~~~~--~~Y~~sK~~~E~~l~-------~  244 (380)
                       ++...+++|..+.. .+++++....    -.++|++||.+....      ....  ..|+.+|...+.+.+       .
T Consensus       193 ee~~~~v~Vn~~~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~------~p~~~~~aY~AaKaal~~ltrsLA~Ela~  266 (405)
T 3zu3_A          193 SEIDSTVAVMGGEDWQMWIDALLDAGVLAEGAQTTAFTYLGEKIT------HDIYWNGSIGAAKKDLDQKVLAIRESLAA  266 (405)
T ss_dssp             HHHHHHHHHHSSHHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGG------TTTTTTSHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHhhchhHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCc------CCCccchHHHHHHHHHHHHHHHHHHHhCc
Confidence             11122556666655 5566554322    258999999865221      1122  569999999997765       3


Q ss_pred             C-CCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHHHHhC
Q 016901          245 S-GLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKN  298 (380)
Q Consensus       245 ~-g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~  298 (380)
                      . |+++++|.||.+..+.................+.+.+-..+|+|+++.+++.+
T Consensus       267 ~~GIRVNaVaPG~i~T~~s~~ip~~p~y~~~l~~~mkr~G~~Ed~a~~i~~L~sd  321 (405)
T 3zu3_A          267 HGGGDARVSVLKAVVSQASSAIPMMPLYLSLLFKVMKEKGTHEGCIEQVYSLYKD  321 (405)
T ss_dssp             TTSCEEEEEECCCCCCHHHHTSTTHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHH
T ss_pred             ccCeEEEEEEeCCCcCchhhcCCCCcHHHHHHHHHHhcCCCcHHHHHHHHHHHhc
Confidence            7 99999999999987632110000000000001222345567899999988875

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.66  E-value=3.8e-16  Score=172.38  Aligned_cols=211  Identities=12%  Similarity=-0.024  Sum_probs=143.3

Q ss_pred             CCCCeEEEEcCCCh-HHHHHHHHHHHCCCeEEEEe-CCchhHHHHHHHHH-hhhhcccccccCCCCCCceEEEEcCCCCh
Q 016901           78 KDDNLAFVAGATGK-VGSRTVRELLKLGFRVRAGV-RSVQRAENLVQSVK-QMKLDGELANKGIQPVEMLELVECDLEKR  154 (380)
Q Consensus        78 ~~~~~vlVtGatG~-iG~~lv~~Ll~~G~~V~~l~-R~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~  154 (380)
                      +.++++|||||+|+ ||.++++.|+++|++|++++ |+.+...+..+.+. .+.-          ...++.++.+|++|.
T Consensus       650 L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~----------~G~~v~~v~~DVsd~  719 (1878)
T 2uv9_A          650 FQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGA----------RGSQLVVVPFNQGSK  719 (1878)
T ss_dssp             CTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCC----------TTCEEEEEECCTTCH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhc----------cCCeEEEEEcCCCCH
Confidence            46789999999999 99999999999999999985 66665554443332 1110          015688999999999


Q ss_pred             hcHHHHhc-----------CCCEEEEccccCccc-c-C-------CCCCcchhhHHHHHHHHHHHHH------cCCCEEE
Q 016901          155 VQIEPALG-----------NASVVICCIGASEKE-V-F-------DITGPYRIDFQATKNLVDAATI------AKVNHFI  208 (380)
Q Consensus       155 ~~~~~a~~-----------~~d~Vi~~Ag~~~~~-~-~-------~~~~~~~~nv~g~~~ll~a~~~------~~v~r~V  208 (380)
                      ++++++++           .+|+||||||..... . .       ++...+++|+.|+.+++++++.      .+.++||
T Consensus       720 esV~alv~~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IV  799 (1878)
T 2uv9_A          720 QDVEALVNYIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVIL  799 (1878)
T ss_dssp             HHHHHHHHHHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECC
T ss_pred             HHHHHHHHHHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEE
Confidence            88887652           589999999965332 1 1       1233478999999998877432      1225899


Q ss_pred             EEccCCCCCCCCchhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCccc-CCCcccccccceeeccCCcccC
Q 016901          209 MVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGME-RPTDAYKETHNITLSQEDTLFG  280 (380)
Q Consensus       209 ~~SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~-gp~~~~~~~~~~~~~~~~~~~~  280 (380)
                      ++||......        ....|+.+|.+.+.+.+.       .+++++.|.||++. ++..............   ...
T Consensus       800 nISS~ag~~g--------g~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m~~~~~~~~~~~~~---~pl  868 (1878)
T 2uv9_A          800 PLSPNHGTFG--------NDGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGLMSANNLVAEGVEK---LGV  868 (1878)
T ss_dssp             EECSCSSSSS--------CCSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTSCSHHHHTHHHHHT---TTC
T ss_pred             EEcchhhccC--------CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCcccccchhhHHHHHh---cCC
Confidence            9999765332        124699999999877531       23999999999998 5532110000000001   111


Q ss_pred             CCCCHHHHHHHHHHHHhCCC--CccCcEEEE
Q 016901          281 GQVSNLQVAELLACMAKNRS--LSYCKVVEV  309 (380)
Q Consensus       281 ~~i~~~DvA~~i~~~l~~~~--~~~~~~~ni  309 (380)
                      ...+++|+|.+++.++....  ...|..+.+
T Consensus       869 r~~sPeEVA~avlfLaSd~a~s~iTGq~I~V  899 (1878)
T 2uv9_A          869 RTFSQQEMAFNLLGLMAPAIVNLCQSDPVFA  899 (1878)
T ss_dssp             CCBCHHHHHHHHHHHHSHHHHHHHTTSCEEE
T ss_pred             CCCCHHHHHHHHHHHhCCcccccccCcEEEE
Confidence            34699999999999886542  234666666

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.65  E-value=4.3e-17  Score=174.91  Aligned_cols=212  Identities=14%  Similarity=-0.003  Sum_probs=142.0

Q ss_pred             CCCCeEEEEcCCCh-HHHHHHHHHHHCCCeEEEE-eCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh
Q 016901           78 KDDNLAFVAGATGK-VGSRTVRELLKLGFRVRAG-VRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (380)
Q Consensus        78 ~~~~~vlVtGatG~-iG~~lv~~Ll~~G~~V~~l-~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~  155 (380)
                      ++++++|||||+|+ ||+++++.|+++|++|+++ .|+.++..+..+.+...         ......++.++.+|++|.+
T Consensus       474 L~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ae---------l~a~Ga~V~vV~~DVTD~e  544 (1688)
T 2pff_A          474 FKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAK---------YGAKGSTLIVVPFNQGSKQ  544 (1688)
T ss_dssp             CCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTT---------TCCTTCEEEEEECCSSSTT
T ss_pred             cCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHH---------hhcCCCeEEEEEeCCCCHH
Confidence            46789999999998 9999999999999999998 57666554443332110         0001146889999999998


Q ss_pred             cHHHHhc-------------CCCEEEEccccCccc-cC--------CCCCcchhhHHHHHHHHHHHHHc------CCCEE
Q 016901          156 QIEPALG-------------NASVVICCIGASEKE-VF--------DITGPYRIDFQATKNLVDAATIA------KVNHF  207 (380)
Q Consensus       156 ~~~~a~~-------------~~d~Vi~~Ag~~~~~-~~--------~~~~~~~~nv~g~~~ll~a~~~~------~v~r~  207 (380)
                      +++++++             .+|+||||||..... ..        ++...+++|+.|+.+++++++..      +-++|
T Consensus       545 sVeaLVe~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrI  624 (1688)
T 2pff_A          545 DVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVI  624 (1688)
T ss_dssp             HHHHHHHHHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEEC
T ss_pred             HHHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEE
Confidence            8887652             589999999965332 11        12344789999999999887321      22589


Q ss_pred             EEEccCCCCCCCCchhhhchhhHHHHHHHHHHHHH-HH------CCCCEEEEecCcccC-CCcccccccceeeccCCccc
Q 016901          208 IMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEAL-IA------SGLPYTIVRPGGMER-PTDAYKETHNITLSQEDTLF  279 (380)
Q Consensus       208 V~~SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l-~~------~g~~~~ivRpg~v~g-p~~~~~~~~~~~~~~~~~~~  279 (380)
                      |++||......        ....|+.+|++.+.++ +.      ..++++.|.||++.+ +.....  .... .......
T Consensus       625 VnISSiAG~~G--------g~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~TT~M~~~~--e~~~-~~l~~ip  693 (1688)
T 2pff_A          625 LPMSPNHGTFG--------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSAN--NIIA-EGIEKMG  693 (1688)
T ss_dssp             CCCCSCTTTSS--------CBTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCCCSSSCTT--TTCS-TTTSSSS
T ss_pred             EEEEChHhccC--------CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcCCcccCCc--hHHH-HHHHhCC
Confidence            99999765332        2246999999999883 31      238899999999984 321100  0000 0000011


Q ss_pred             CCCCCHHHHHHHHHHHHhCC--CCccCcEEEE
Q 016901          280 GGQVSNLQVAELLACMAKNR--SLSYCKVVEV  309 (380)
Q Consensus       280 ~~~i~~~DvA~~i~~~l~~~--~~~~~~~~ni  309 (380)
                      ....+++|+|++++.++...  ....++.+.+
T Consensus       694 lR~~sPEEVA~aIlFLaSd~sAs~ITGq~I~V  725 (1688)
T 2pff_A          694 VRTFSQKEMAFNLLGLLTPEVVELCQKSPVMA  725 (1688)
T ss_dssp             CCCCCCCTTHHHHHHHTSTTHHHHHTTSCCCC
T ss_pred             CCCCCHHHHHHHHHHHhCCCccccccCcEEEE
Confidence            13458899999999998765  1124565554

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.62  E-value=4e-16  Score=151.72  Aligned_cols=203  Identities=9%  Similarity=0.028  Sum_probs=128.5

Q ss_pred             CCCCeEEEEcCCChHHHH--HHHHHHHCCCeEEEEeCCchh------------HHHHHHHHHhhhhcccccccCCCCCCc
Q 016901           78 KDDNLAFVAGATGKVGSR--TVRELLKLGFRVRAGVRSVQR------------AENLVQSVKQMKLDGELANKGIQPVEM  143 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~--lv~~Ll~~G~~V~~l~R~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (380)
                      ..+|++|||||+++||.+  +++.|++.|++|+++.|+...            .+.+.+..+..+             .+
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g-------------~~  124 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKG-------------LV  124 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTT-------------CC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcC-------------Cc
Confidence            367899999999999999  999999999999999987543            233333333221             56


Q ss_pred             eEEEEcCCCChhcHHHHh-------cCCCEEEEccccCc-------------cccC------------------------
Q 016901          144 LELVECDLEKRVQIEPAL-------GNASVVICCIGASE-------------KEVF------------------------  179 (380)
Q Consensus       144 v~~~~~Dl~d~~~~~~a~-------~~~d~Vi~~Ag~~~-------------~~~~------------------------  179 (380)
                      +..+.+|++|.+++++++       +.+|++|||||...             ....                        
T Consensus       125 ~~~~~~Dvtd~~~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~  204 (418)
T 4eue_A          125 AKNFIEDAFSNETKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSA  204 (418)
T ss_dssp             EEEEESCTTCHHHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBC
T ss_pred             EEEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCC
Confidence            889999999998877765       46899999998631             0000                        


Q ss_pred             ---CCCCcchhhHHHHH-HHHHHHHHcC----CCEEEEEccCCCCCCCCchhhhchh--hHHHHHHHHHHHHHH------
Q 016901          180 ---DITGPYRIDFQATK-NLVDAATIAK----VNHFIMVSSLGTNKFGFPAAILNLF--WGVLLWKRKAEEALI------  243 (380)
Q Consensus       180 ---~~~~~~~~nv~g~~-~ll~a~~~~~----v~r~V~~SS~~~~~~~~~~~~~~~~--~~Y~~sK~~~E~~l~------  243 (380)
                         ++...+++|..+.. .+++++...+    -.++|++||.+....      ...+  ..|+.+|.+.+.+.+      
T Consensus       205 t~e~~~~~~~vn~~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~------~p~~~~~aY~ASKaAL~~ltrsLA~EL  278 (418)
T 4eue_A          205 SIEEIEETRKVMGGEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRT------YKIYREGTIGIAKKDLEDKAKLINEKL  278 (418)
T ss_dssp             CHHHHHHHHHHHSSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGG------TTTTTTSHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHhhHHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCC------CCccccHHHHHHHHHHHHHHHHHHHHh
Confidence               00111334444333 4555554433    247999999765221      1223  579999999987754      


Q ss_pred             -H-CCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHHHHhCC
Q 016901          244 -A-SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNR  299 (380)
Q Consensus       244 -~-~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~  299 (380)
                       . .|+++++|.||.|..+...................+..-..+|+++.+..++.+.
T Consensus       279 a~~~GIrVN~V~PG~v~T~~s~~ip~~p~y~~~~~~~mk~~G~~E~v~e~~~~L~sd~  336 (418)
T 4eue_A          279 NRVIGGRAFVSVNKALVTKASAYIPTFPLYAAILYKVMKEKNIHENCIMQIERMFSEK  336 (418)
T ss_dssp             HHHHSCEEEEEECCCCCCHHHHTSTTHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHT
T ss_pred             CCccCeEEEEEECCcCcChhhhcCCCCcHHHHHHHHHHhhcCChHHHHHHHHHHhhcc
Confidence             4 6999999999999875321100000000000001112345678888888888763

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.60  E-value=6e-15  Score=155.11  Aligned_cols=198  Identities=17%  Similarity=0.161  Sum_probs=142.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHH-HCCC-eEEEEeCCch---hHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCC
Q 016901           79 DDNLAFVAGATGKVGSRTVRELL-KLGF-RVRAGVRSVQ---RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK  153 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll-~~G~-~V~~l~R~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d  153 (380)
                      .++++|||||+|+||+.+++.|+ ++|+ +|+++.|+..   ..+++.++++..+             .++.++.+|++|
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G-------------~~v~~~~~Dvsd  595 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYG-------------AEVSLQACDVAD  595 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTT-------------CEEEEEECCTTC
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcC-------------CcEEEEEeecCC
Confidence            57899999999999999999999 7898 5999999843   4445555444332             579999999999


Q ss_pred             hhcHHHHhc------CCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCCc
Q 016901          154 RVQIEPALG------NASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFP  221 (380)
Q Consensus       154 ~~~~~~a~~------~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~  221 (380)
                      .++++++++      .+|.||||||.......      ++...+++|+.|+.++.+++.. .. +||++||......   
T Consensus       596 ~~~v~~~~~~~~~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~-~l-~iV~~SS~ag~~g---  670 (795)
T 3slk_A          596 RETLAKVLASIPDEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDP-DV-ALVLFSSVSGVLG---  670 (795)
T ss_dssp             HHHHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCT-TS-EEEEEEETHHHHT---
T ss_pred             HHHHHHHHHHHHHhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhh-CC-EEEEEccHHhcCC---
Confidence            999998874      46999999996533221      2334478899999999998833 33 8999999754221   


Q ss_pred             hhhhchhhHHHHHHHHHHHHHH---HCCCCEEEEecCcccCCCcccc--cccceeeccCCcccCCCCCHHHHHHHHHHHH
Q 016901          222 AAILNLFWGVLLWKRKAEEALI---ASGLPYTIVRPGGMERPTDAYK--ETHNITLSQEDTLFGGQVSNLQVAELLACMA  296 (380)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~---~~g~~~~ivRpg~v~gp~~~~~--~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l  296 (380)
                         ......|+.+|...+.+.+   ..|++++.|.||.+.+++....  ......+..   .....+..+++.+.+..++
T Consensus       671 ---~~g~~~YaAaka~~~alA~~~~~~Gi~v~sI~pG~v~t~g~~~~~~~~~~~~~~~---~g~~~l~~~e~~~~~~~~l  744 (795)
T 3slk_A          671 ---SGGQGNYAAANSFLDALAQQRQSRGLPTRSLAWGPWAEHGMASTLREAEQDRLAR---SGLLPISTEEGLSQFDAAC  744 (795)
T ss_dssp             ---CSSCHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSCCCHHHHHHHHHHHHHHH---TTBCCCCHHHHHHHHHHHH
T ss_pred             ---CCCCHHHHHHHHHHHHHHHHHHHcCCeEEEEECCeECcchhhccccHHHHHHHHh---cCCCCCCHHHHHHHHHHHH
Confidence               1233569999988886654   5899999999999986642111  000000111   1113588999999999888


Q ss_pred             hCCC
Q 016901          297 KNRS  300 (380)
Q Consensus       297 ~~~~  300 (380)
                      ..+.
T Consensus       745 ~~~~  748 (795)
T 3slk_A          745 GGAH  748 (795)
T ss_dssp             TSSC
T ss_pred             hCCC
Confidence            7765

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=99.39  E-value=2.4e-12  Score=102.49  Aligned_cols=95  Identities=21%  Similarity=0.174  Sum_probs=80.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      ++++|+|+|+ |++|+.+++.|+++| ++|++++|++++.+.+..                   .++.++.+|+++.+++
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~-------------------~~~~~~~~d~~~~~~~   63 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLNR-------------------MGVATKQVDAKDEAGL   63 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHT-------------------TTCEEEECCTTCHHHH
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHh-------------------CCCcEEEecCCCHHHH
Confidence            4578999999 999999999999999 999999999887765531                   5678899999999999


Q ss_pred             HHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEE
Q 016901          158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIM  209 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~  209 (380)
                      .+++.++|+|||+++..                ...++++++.+.|+++|.+
T Consensus        64 ~~~~~~~d~vi~~~~~~----------------~~~~~~~~~~~~g~~~~~~   99 (118)
T 3ic5_A           64 AKALGGFDAVISAAPFF----------------LTPIIAKAAKAAGAHYFDL   99 (118)
T ss_dssp             HHHTTTCSEEEECSCGG----------------GHHHHHHHHHHTTCEEECC
T ss_pred             HHHHcCCCEEEECCCch----------------hhHHHHHHHHHhCCCEEEe
Confidence            99999999999998532                1467889999999865543

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.36  E-value=5e-12  Score=146.55  Aligned_cols=165  Identities=15%  Similarity=0.098  Sum_probs=118.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFR-VRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~-V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      .+++++||||+|+||+.+++.|+++|++ |+++.|+..+.+...+.++.+.-      .+    .++.++.+|++|.+++
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~------~g----~~v~~~~~Dvsd~~~v 1952 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRR------QG----VQVLVSTSNASSLDGA 1952 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHH------TT----CEEEEECCCSSSHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHh------CC----CEEEEEecCCCCHHHH
Confidence            5689999999999999999999999987 77788886544332222222210      01    5688899999999888


Q ss_pred             HHHh------cCCCEEEEccccCcc------ccCCCCCcchhhHHHHHHHHHHHHHc--CCCEEEEEccCCCCCCCCchh
Q 016901          158 EPAL------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFPAA  223 (380)
Q Consensus       158 ~~a~------~~~d~Vi~~Ag~~~~------~~~~~~~~~~~nv~g~~~ll~a~~~~--~v~r~V~~SS~~~~~~~~~~~  223 (380)
                      ++++      +.+|.||||||....      +..++...+++|+.|+.++.+++...  ..++||++||.......    
T Consensus      1953 ~~~~~~~~~~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~---- 2028 (2512)
T 2vz8_A         1953 RSLITEATQLGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGN---- 2028 (2512)
T ss_dssp             HHHHHHHHHHSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTC----
T ss_pred             HHHHHHHHhcCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCC----
Confidence            7765      468999999996422      22345667899999999998887653  24699999997542211    


Q ss_pred             hhchhhHHHHHHHHHHHHHH---HCCCCEEEEecCcccC
Q 016901          224 ILNLFWGVLLWKRKAEEALI---ASGLPYTIVRPGGMER  259 (380)
Q Consensus       224 ~~~~~~~Y~~sK~~~E~~l~---~~g~~~~ivRpg~v~g  259 (380)
                        .....|+.+|...+.+.+   ..|++...+..|.+-+
T Consensus      2029 --~g~~~Y~aaKaal~~l~~~rr~~Gl~~~a~~~g~~~~ 2065 (2512)
T 2vz8_A         2029 --AGQANYGFANSAMERICEKRRHDGLPGLAVQWGAIGD 2065 (2512)
T ss_dssp             --TTCHHHHHHHHHHHHHHHHHHHTTSCCCEEEECCBCT
T ss_pred             --CCcHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCcCC
Confidence              223569999999998876   5899988888877643

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.35  E-value=6.1e-12  Score=145.84  Aligned_cols=225  Identities=14%  Similarity=0.082  Sum_probs=137.9

Q ss_pred             CCCCeEEEEcCCCh-HHHHHHHHHHHCCCeEEEEeCCchh-----HHHHHHHHHhhhhcccccccCCCCCCceEEEEcCC
Q 016901           78 KDDNLAFVAGATGK-VGSRTVRELLKLGFRVRAGVRSVQR-----AENLVQSVKQMKLDGELANKGIQPVEMLELVECDL  151 (380)
Q Consensus        78 ~~~~~vlVtGatG~-iG~~lv~~Ll~~G~~V~~l~R~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl  151 (380)
                      +++|++|||||+++ ||+++++.|++.|++|++.+|+.+.     .+++.+.+...             ..++..+.+|+
T Consensus      2134 l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~-------------G~~~~~v~~Dv 2200 (3089)
T 3zen_D         2134 XXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARF-------------DATLWVVPANM 2200 (3089)
T ss_dssp             CCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCT-------------TCEEEEEECCT
T ss_pred             CCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhc-------------CCeEEEEEecC
Confidence            57899999999999 9999999999999999999998765     33333322211             14688899999


Q ss_pred             CChhcHHHHh-----------cCCCEEEEcccc----Ccc-------ccCCCCCc----chhhHHHHHHHHHHHH----H
Q 016901          152 EKRVQIEPAL-----------GNASVVICCIGA----SEK-------EVFDITGP----YRIDFQATKNLVDAAT----I  201 (380)
Q Consensus       152 ~d~~~~~~a~-----------~~~d~Vi~~Ag~----~~~-------~~~~~~~~----~~~nv~g~~~ll~a~~----~  201 (380)
                      +|.+++++++           +++|++|||||.    ...       ...++...    +++|+.++..+++++.    +
T Consensus      2201 td~~~v~~lv~~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~ 2280 (3089)
T 3zen_D         2201 ASYSDIDKLVEWVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAE 2280 (3089)
T ss_dssp             TCHHHHHHHHHHHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9998887663           358999999997    111       11223333    6788888887777664    3


Q ss_pred             cCCC---EEEE-EccCCCCCCCCchhhhchhhHHHHHHHHHHHHHH----H----CCCCEEEEecCcccCCCcccccccc
Q 016901          202 AKVN---HFIM-VSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI----A----SGLPYTIVRPGGMERPTDAYKETHN  269 (380)
Q Consensus       202 ~~v~---r~V~-~SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~----~----~g~~~~ivRpg~v~gp~~~~~~~~~  269 (380)
                      .+..   .+|. .|+.... .       .....|+.||.+.+.+.+    +    .+++++.+.||++.+..........
T Consensus      2281 ~~~g~~~~ii~~~ss~~g~-~-------g~~~aYsASKaAl~~LtrslA~E~~~a~~IrVn~v~PG~v~tT~l~~~~~~~ 2352 (3089)
T 3zen_D         2281 RDIASRLHVVLPGSPNRGM-F-------GGDGAYGEAKSALDALENRWSAEKSWAERVSLAHALIGWTKGTGLMGQNDAI 2352 (3089)
T ss_dssp             TTCCCCEEEEEEECSSTTS-C-------SSCSSHHHHGGGHHHHHHHHHHCSTTTTTEEEEEEECCCEECSTTTTTTTTT
T ss_pred             cCCCceeEEEEECCccccc-C-------CCchHHHHHHHHHHHHHHHHHhccccCCCeEEEEEeecccCCCcccccchhH
Confidence            3321   2232 2322111 1       112359999999987765    2    3588999999999743211000000


Q ss_pred             eeeccCCcccCCCCCHHHHHHHHHHHHhCCCC--ccCcE--EEEecCCCCCcchHHHHHH
Q 016901          270 ITLSQEDTLFGGQVSNLQVAELLACMAKNRSL--SYCKV--VEVIAETTAPLTPMEELLA  325 (380)
Q Consensus       270 ~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~~~--~~~~~--~ni~~~~~~s~~~~~e~~~  325 (380)
                      ....  .........++|+|.+++.++.....  ..+..  +++.++-.....++.++..
T Consensus      2353 ~~~~--~~~~~r~~~PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~~~~~~~~~~~~ 2410 (3089)
T 3zen_D         2353 VSAV--EEAGVTTYTTDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGLGDIKIDMAELAA 2410 (3089)
T ss_dssp             HHHH--GGGSCBCEEHHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSCSSCCCCHHHHTH
T ss_pred             HHHH--HhcCCCCCCHHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCcCcCCCCHHHHHH
Confidence            0000  01111345899999999998865321  12232  3344655432334444443

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=99.15  E-value=5.5e-11  Score=112.52  Aligned_cols=118  Identities=10%  Similarity=0.058  Sum_probs=86.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-------eEEEEeCC----chhHHHHHHHHHhhhhcccccccCCCCCCceEEE
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGF-------RVRAGVRS----VQRAENLVQSVKQMKLDGELANKGIQPVEMLELV  147 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~-------~V~~l~R~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  147 (380)
                      +.++|+||||+||||++++..|+..|+       +|++++++    .++.+.....+...               ...+ 
T Consensus         4 ~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~---------------~~~~-   67 (329)
T 1b8p_A            4 TPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDC---------------AFPL-   67 (329)
T ss_dssp             CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTT---------------TCTT-
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhh---------------cccc-
Confidence            457899999999999999999999885       79998888    44444322222210               0011 


Q ss_pred             EcCCCChhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcC-CC-EEEEEcc
Q 016901          148 ECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK-VN-HFIMVSS  212 (380)
Q Consensus       148 ~~Dl~d~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~-v~-r~V~~SS  212 (380)
                      ..|+....++.++++++|+|||+||.......+....+..|+.+++++++++.+.+ .+ +||++|.
T Consensus        68 ~~~i~~~~~~~~al~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SN  134 (329)
T 1b8p_A           68 LAGMTAHADPMTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGN  134 (329)
T ss_dssp             EEEEEEESSHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             cCcEEEecCcHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccC
Confidence            24665567788999999999999996543333333456789999999999999984 66 8888886

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=99.13  E-value=3e-10  Score=107.22  Aligned_cols=118  Identities=14%  Similarity=0.102  Sum_probs=85.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G--~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ++|+|+||||+|++|..++..|+++|  ++|++++++++  ......+....           ...++..    +.+..+
T Consensus         7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~~-----------~~~~v~~----~~~t~d   69 (326)
T 1smk_A            7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHMD-----------TGAVVRG----FLGQQQ   69 (326)
T ss_dssp             -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTSC-----------SSCEEEE----EESHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhccc-----------ccceEEE----EeCCCC
Confidence            45789999999999999999999998  78999988775  11111111100           0012222    233456


Q ss_pred             HHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccC
Q 016901          157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL  213 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~  213 (380)
                      +.++++++|+|||+||...............|+.+++++++++.+.+.+.+|+++|-
T Consensus        70 ~~~al~gaDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~SN  126 (326)
T 1smk_A           70 LEAALTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISN  126 (326)
T ss_dssp             HHHHHTTCSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred             HHHHcCCCCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECC
Confidence            788999999999999965433333445578999999999999999988888888873

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=99.08  E-value=1.5e-10  Score=108.68  Aligned_cols=119  Identities=18%  Similarity=0.127  Sum_probs=81.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeC--CchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGF--RVRAGVR--SVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~--~V~~l~R--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      |+|+||||+||+|++++..|+.+|.  ++.++++  ++++.+.....+.... . .       ....+.+...    .++
T Consensus         1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~-~-~-------~~~~~~i~~~----~d~   67 (313)
T 1hye_A            1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDAL-A-G-------TRSDANIYVE----SDE   67 (313)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHH-T-T-------SCCCCEEEEE----ETT
T ss_pred             CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhH-H-h-------cCCCeEEEeC----Ccc
Confidence            4799999999999999999999884  5777777  5544433222222210 0 0       0012222221    123


Q ss_pred             HHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccC
Q 016901          157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL  213 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~  213 (380)
                      +.++++++|+|||+||............+..|+.+++++++++++.+ +++|+++|-
T Consensus        68 l~~al~gaD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~SN  123 (313)
T 1hye_A           68 NLRIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVITN  123 (313)
T ss_dssp             CGGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECSS
T ss_pred             hHHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecC
Confidence            67789999999999996543333333457899999999999999999 888888873

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.08  E-value=3.4e-10  Score=105.05  Aligned_cols=82  Identities=21%  Similarity=0.189  Sum_probs=70.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +.+++++||||+|++|++++..|+++|++|++++|+.++.+++.+.+...              .++.++.+|++|.+++
T Consensus       117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~--------------~~~~~~~~D~~~~~~~  182 (287)
T 1lu9_A          117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR--------------FKVNVTAAETADDASR  182 (287)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH--------------HTCCCEEEECCSHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhc--------------CCcEEEEecCCCHHHH
Confidence            36789999999999999999999999999999999988877766555321              2356788999999999


Q ss_pred             HHHhcCCCEEEEcccc
Q 016901          158 EPALGNASVVICCIGA  173 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag~  173 (380)
                      .++++.+|+||||+|.
T Consensus       183 ~~~~~~~DvlVn~ag~  198 (287)
T 1lu9_A          183 AEAVKGAHFVFTAGAI  198 (287)
T ss_dssp             HHHTTTCSEEEECCCT
T ss_pred             HHHHHhCCEEEECCCc
Confidence            9999999999999974

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=99.04  E-value=1.2e-09  Score=89.85  Aligned_cols=100  Identities=17%  Similarity=0.189  Sum_probs=75.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ++++|+|+|+ |.+|+.+++.|.+.|++|++++|++++.+.+.+                   ....++.+|.++.+.+.
T Consensus         5 ~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~-------------------~~~~~~~~d~~~~~~l~   64 (144)
T 2hmt_A            5 KNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS-------------------YATHAVIANATEENELL   64 (144)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTT-------------------TCSEEEECCTTCHHHHH
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-------------------hCCEEEEeCCCCHHHHH
Confidence            4568999997 999999999999999999999998765543211                   23567889999988787


Q ss_pred             HH-hcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEcc
Q 016901          159 PA-LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (380)
Q Consensus       159 ~a-~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS  212 (380)
                      ++ ++++|+||++++..          .+.|    ..+++.+++.+++++|..++
T Consensus        65 ~~~~~~~d~vi~~~~~~----------~~~~----~~~~~~~~~~~~~~ii~~~~  105 (144)
T 2hmt_A           65 SLGIRNFEYVIVAIGAN----------IQAS----TLTTLLLKELDIPNIWVKAQ  105 (144)
T ss_dssp             TTTGGGCSEEEECCCSC----------HHHH----HHHHHHHHHTTCSEEEEECC
T ss_pred             hcCCCCCCEEEECCCCc----------hHHH----HHHHHHHHHcCCCeEEEEeC
Confidence            76 78899999998642          1223    24666777788777776654

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=99.03  E-value=2.8e-09  Score=87.74  Aligned_cols=74  Identities=26%  Similarity=0.197  Sum_probs=63.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      .+++|+|+|+ |++|+++++.|.++|++|+++++++++.+.+.+                   .++.++.+|.+|++.+.
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~-------------------~~~~~~~gd~~~~~~l~   64 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED-------------------EGFDAVIADPTDESFYR   64 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH-------------------TTCEEEECCTTCHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH-------------------CCCcEEECCCCCHHHHH
Confidence            4578999996 999999999999999999999999987766543                   46788999999999888


Q ss_pred             HH-hcCCCEEEEccc
Q 016901          159 PA-LGNASVVICCIG  172 (380)
Q Consensus       159 ~a-~~~~d~Vi~~Ag  172 (380)
                      ++ +.++|+||.+.+
T Consensus        65 ~~~~~~~d~vi~~~~   79 (141)
T 3llv_A           65 SLDLEGVSAVLITGS   79 (141)
T ss_dssp             HSCCTTCSEEEECCS
T ss_pred             hCCcccCCEEEEecC
Confidence            76 468999999876

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=99.00  E-value=2.8e-09  Score=99.54  Aligned_cols=116  Identities=9%  Similarity=-0.025  Sum_probs=81.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeC--CchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGF--RVRAGVR--SVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~--~V~~l~R--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      |+|+||||+|++|..++..|+..|.  ++.++++  ++++++.....+.....          ...++.+.. |  +   
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~----------~~~~~~v~~-~--~---   64 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIA----------YDSNTRVRQ-G--G---   64 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHT----------TTCCCEEEE-C--C---
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHh----------hCCCcEEEe-C--C---
Confidence            5799999999999999999999885  6777877  65554433333322110          012344433 2  1   


Q ss_pred             HHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccC
Q 016901          157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL  213 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~  213 (380)
                       .++++++|+|||+||............+..|+.+++++++++++.+.+.+|+++|-
T Consensus        65 -~~a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SN  120 (303)
T 1o6z_A           65 -YEDTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSN  120 (303)
T ss_dssp             -GGGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCS
T ss_pred             -HHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence             45688999999999965433222233478899999999999999998888888873

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=98.97  E-value=3e-08  Score=94.25  Aligned_cols=164  Identities=9%  Similarity=-0.038  Sum_probs=107.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHH-HCCCeEEEEeCCchh------------HHHHHHHHHhhhhcccccccCCCCCCceE
Q 016901           79 DDNLAFVAGATGKVGSRTVRELL-KLGFRVRAGVRSVQR------------AENLVQSVKQMKLDGELANKGIQPVEMLE  145 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll-~~G~~V~~l~R~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  145 (380)
                      .+|++|||||+.++|.+.+..|+ +.|.+|+++.+..+.            .....+.++..+             .+..
T Consensus        49 ~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G-------------~~a~  115 (401)
T 4ggo_A           49 APKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREG-------------LYSV  115 (401)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHT-------------CCEE
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcC-------------CCce
Confidence            57899999999999999999998 679999998875431            233444444443             5788


Q ss_pred             EEEcCCCChhcHHHHh-------cCCCEEEEccccCccccC----------------------CCC----------Ccch
Q 016901          146 LVECDLEKRVQIEPAL-------GNASVVICCIGASEKEVF----------------------DIT----------GPYR  186 (380)
Q Consensus       146 ~~~~Dl~d~~~~~~a~-------~~~d~Vi~~Ag~~~~~~~----------------------~~~----------~~~~  186 (380)
                      .+.+|++|.+.+++++       +++|+|||++|.......                      +..          ...+
T Consensus       116 ~i~~Dv~d~e~i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~  195 (401)
T 4ggo_A          116 TIDGDAFSDEIKAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPAND  195 (401)
T ss_dssp             EEESCTTSHHHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCH
T ss_pred             eEeCCCCCHHHHHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcH
Confidence            9999999988877776       579999999986521100                      000          0011


Q ss_pred             hhHHHHHHH---------HHHHHHcCC----CEEEEEccCCCCCCCCchhhhc-hhhHHHHHHHHHHHHHHH-----CCC
Q 016901          187 IDFQATKNL---------VDAATIAKV----NHFIMVSSLGTNKFGFPAAILN-LFWGVLLWKRKAEEALIA-----SGL  247 (380)
Q Consensus       187 ~nv~g~~~l---------l~a~~~~~v----~r~V~~SS~~~~~~~~~~~~~~-~~~~Y~~sK~~~E~~l~~-----~g~  247 (380)
                      -++.+|..+         +.+....++    .++|-+|+.|...     .... ....++..|..+|...+.     .++
T Consensus       196 eeie~T~~vMg~s~~s~w~~al~~a~lla~G~siva~SYiGse~-----t~P~Y~~G~mG~AKaaLEa~~r~La~eL~~~  270 (401)
T 4ggo_A          196 EEAAATVKVMGGEDWERWIKQLSKEGLLEEGCITLAYSYIGPEA-----TQALYRKGTIGKAKEHLEATAHRLNKENPSI  270 (401)
T ss_dssp             HHHHHHHHHHSSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGG-----GHHHHTTSHHHHHHHHHHHHHHHHHHHCTTE
T ss_pred             HHHHHHHHHHhhhHHHHHHHHHHhhhcccCCceEEEEeccCcce-----eecCCCccHHHHHHHHHHHHHHHHHHhcCCC
Confidence            233444433         333344331    3788888876521     1111 112579999999977663     457


Q ss_pred             CEEEEecCcccCC
Q 016901          248 PYTIVRPGGMERP  260 (380)
Q Consensus       248 ~~~ivRpg~v~gp  260 (380)
                      ++.++-++.+...
T Consensus       271 ~a~v~v~~a~vT~  283 (401)
T 4ggo_A          271 RAFVSVNKGLVTR  283 (401)
T ss_dssp             EEEEEECCCCCCT
T ss_pred             cEEEEEcCccccc
Confidence            7888888777544

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.90  E-value=2.1e-08  Score=81.82  Aligned_cols=99  Identities=17%  Similarity=0.141  Sum_probs=73.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ++|+|+|+|+ |++|..+++.|.+.|++|++++|+++..+.+.+.                  .++.++.+|.++.+.+.
T Consensus         3 ~~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~------------------~~~~~~~~d~~~~~~l~   63 (140)
T 1lss_A            3 HGMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE------------------IDALVINGDCTKIKTLE   63 (140)
T ss_dssp             --CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH------------------CSSEEEESCTTSHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHh------------------cCcEEEEcCCCCHHHHH
Confidence            3478999986 9999999999999999999999998766554320                  24667889999888776


Q ss_pred             HH-hcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEc
Q 016901          159 PA-LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVS  211 (380)
Q Consensus       159 ~a-~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~S  211 (380)
                      ++ +.++|+||++.+..           ..|    ..+.+.++..+.+++|..+
T Consensus        64 ~~~~~~~d~vi~~~~~~-----------~~~----~~~~~~~~~~~~~~ii~~~  102 (140)
T 1lss_A           64 DAGIEDADMYIAVTGKE-----------EVN----LMSSLLAKSYGINKTIARI  102 (140)
T ss_dssp             HTTTTTCSEEEECCSCH-----------HHH----HHHHHHHHHTTCCCEEEEC
T ss_pred             HcCcccCCEEEEeeCCc-----------hHH----HHHHHHHHHcCCCEEEEEe
Confidence            55 67899999997521           223    2455667777777777544

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.90  E-value=1.7e-09  Score=106.42  Aligned_cols=116  Identities=18%  Similarity=0.226  Sum_probs=83.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ++++|+|+| +|++|+++++.|++.|++|++++|+.++.+.+.+                 ...++..+.+|++|.+++.
T Consensus         2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~-----------------~~~~~~~~~~Dv~d~~~l~   63 (450)
T 1ff9_A            2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSA-----------------GVQHSTPISLDVNDDAALD   63 (450)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTT-----------------TCTTEEEEECCTTCHHHHH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHH-----------------hcCCceEEEeecCCHHHHH
Confidence            467899998 8999999999999999999999999876654321                 1134778899999999999


Q ss_pred             HHhcCCCEEEEccccCccccC-----CC-CCcch--hhHHHHHHHHHHHHHcCCCEEEEEccCCC
Q 016901          159 PALGNASVVICCIGASEKEVF-----DI-TGPYR--IDFQATKNLVDAATIAKVNHFIMVSSLGT  215 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~~~~~-----~~-~~~~~--~nv~g~~~ll~a~~~~~v~r~V~~SS~~~  215 (380)
                      ++++++|+||||++.......     .. ...+.  .....+.+++++|++.|++   +++..+.
T Consensus        64 ~~l~~~DvVIn~a~~~~~~~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aGv~---~i~g~g~  125 (450)
T 1ff9_A           64 AEVAKHDLVISLIPYTFHATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGIT---VMNEIGL  125 (450)
T ss_dssp             HHHTTSSEEEECCC--CHHHHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTTCE---EECSCBB
T ss_pred             HHHcCCcEEEECCccccchHHHHHHHhCCCeEEEeecccHHHHHHHHHHHHCCCe---EEeCCCC
Confidence            999999999999985421100     00 00111  1124678899999999873   4555554

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.82  E-value=1.7e-08  Score=98.07  Aligned_cols=96  Identities=14%  Similarity=0.222  Sum_probs=77.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC---CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLG---FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G---~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      ++|+|+|| |+||+.+++.|+++|   .+|++.+|+.++.+.+.+.+...+            ..++..+.+|++|.+++
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~------------~~~~~~~~~D~~d~~~l   68 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKG------------YGEIDITTVDADSIEEL   68 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTT------------CCCCEEEECCTTCHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhc------------CCceEEEEecCCCHHHH
Confidence            68999998 999999999999998   389999999998887776554210            13688999999999999


Q ss_pred             HHHhcC--CCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCC
Q 016901          158 EPALGN--ASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN  205 (380)
Q Consensus       158 ~~a~~~--~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~  205 (380)
                      ++++++  +|+||||++...                ...++++|.+.|+.
T Consensus        69 ~~~l~~~~~DvVin~ag~~~----------------~~~v~~a~l~~g~~  102 (405)
T 4ina_A           69 VALINEVKPQIVLNIALPYQ----------------DLTIMEACLRTGVP  102 (405)
T ss_dssp             HHHHHHHCCSEEEECSCGGG----------------HHHHHHHHHHHTCC
T ss_pred             HHHHHhhCCCEEEECCCccc----------------ChHHHHHHHHhCCC
Confidence            999987  999999997421                24567777777763

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.77  E-value=1e-07  Score=79.55  Aligned_cols=77  Identities=13%  Similarity=0.163  Sum_probs=62.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCc-hhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV-QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      ..++|+|+|+ |.+|+++++.|.+.|++|++++|++ ++.+.+.....                .++.++.+|.+|++.+
T Consensus         2 ~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~----------------~~~~~i~gd~~~~~~l   64 (153)
T 1id1_A            2 RKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG----------------DNADVIPGDSNDSSVL   64 (153)
T ss_dssp             CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC----------------TTCEEEESCTTSHHHH
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhc----------------CCCeEEEcCCCCHHHH
Confidence            3467999995 9999999999999999999999984 44433332111                4688999999999999


Q ss_pred             HHH-hcCCCEEEEccc
Q 016901          158 EPA-LGNASVVICCIG  172 (380)
Q Consensus       158 ~~a-~~~~d~Vi~~Ag  172 (380)
                      .++ ++++|.||.+.+
T Consensus        65 ~~a~i~~ad~vi~~~~   80 (153)
T 1id1_A           65 KKAGIDRCRAILALSD   80 (153)
T ss_dssp             HHHTTTTCSEEEECSS
T ss_pred             HHcChhhCCEEEEecC
Confidence            887 899999999875

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.72  E-value=6.2e-08  Score=92.85  Aligned_cols=94  Identities=20%  Similarity=0.233  Sum_probs=74.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ..|+|+|.|| |++|+.+++.|.+ .++|.+.+|+.++++.+.                    ..+..+..|+.|.+++.
T Consensus        15 ~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~--------------------~~~~~~~~d~~d~~~l~   72 (365)
T 3abi_A           15 RHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVK--------------------EFATPLKVDASNFDKLV   72 (365)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHT--------------------TTSEEEECCTTCHHHHH
T ss_pred             CccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHh--------------------ccCCcEEEecCCHHHHH
Confidence            4468999998 9999999988854 589999999987766542                    45677889999999999


Q ss_pred             HHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEc
Q 016901          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVS  211 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~S  211 (380)
                      ++++++|+||++++...                ...++++|.++|+ ++|=+|
T Consensus        73 ~~~~~~DvVi~~~p~~~----------------~~~v~~~~~~~g~-~yvD~s  108 (365)
T 3abi_A           73 EVMKEFELVIGALPGFL----------------GFKSIKAAIKSKV-DMVDVS  108 (365)
T ss_dssp             HHHTTCSEEEECCCGGG----------------HHHHHHHHHHHTC-EEEECC
T ss_pred             HHHhCCCEEEEecCCcc----------------cchHHHHHHhcCc-ceEeee
Confidence            99999999999987431                2357888888885 666554

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=98.71  E-value=4.1e-08  Score=92.65  Aligned_cols=117  Identities=13%  Similarity=0.092  Sum_probs=82.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC--e-----EEEEeCCc--hhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcC
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGF--R-----VRAGVRSV--QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECD  150 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~--~-----V~~l~R~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  150 (380)
                      .++|+||||+|+||++++..|+..|.  +     ++++++++  ++.+.....+.....            +-+    .+
T Consensus         3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~------------~~~----~~   66 (333)
T 5mdh_A            3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCAL------------PLL----KD   66 (333)
T ss_dssp             CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCC------------TTE----EE
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhh------------ccc----CC
Confidence            46899999999999999999998874  4     88888864  234333333322100            111    12


Q ss_pred             CCChhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCC--EEEEEcc
Q 016901          151 LEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN--HFIMVSS  212 (380)
Q Consensus       151 l~d~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~--r~V~~SS  212 (380)
                      +.......++++++|+|||+||.......+....++.|+..++++++++.+.+.+  +++.+|.
T Consensus        67 ~~~~~~~~~~~~daDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsN  130 (333)
T 5mdh_A           67 VIATDKEEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGN  130 (333)
T ss_dssp             EEEESCHHHHTTTCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             EEEcCCcHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence            2223456778999999999998664444455666899999999999999998865  5666664

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.66  E-value=1.8e-07  Score=78.16  Aligned_cols=100  Identities=14%  Similarity=0.051  Sum_probs=73.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      .+++|+|+|+ |.+|..+++.|.+.|++|++++|++++.+.+..                  ..++.++.+|..+.+.+.
T Consensus        18 ~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~------------------~~g~~~~~~d~~~~~~l~   78 (155)
T 2g1u_A           18 KSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS------------------EFSGFTVVGDAAEFETLK   78 (155)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT------------------TCCSEEEESCTTSHHHHH
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh------------------cCCCcEEEecCCCHHHHH
Confidence            5678999995 999999999999999999999999876543210                  134667889998887777


Q ss_pred             HH-hcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHH-cCCCEEEEEcc
Q 016901          159 PA-LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATI-AKVNHFIMVSS  212 (380)
Q Consensus       159 ~a-~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~-~~v~r~V~~SS  212 (380)
                      ++ +.++|+||.+.+..           .    ....+++.++. .+..++|...+
T Consensus        79 ~~~~~~ad~Vi~~~~~~-----------~----~~~~~~~~~~~~~~~~~iv~~~~  119 (155)
T 2g1u_A           79 ECGMEKADMVFAFTNDD-----------S----TNFFISMNARYMFNVENVIARVY  119 (155)
T ss_dssp             TTTGGGCSEEEECSSCH-----------H----HHHHHHHHHHHTSCCSEEEEECS
T ss_pred             HcCcccCCEEEEEeCCc-----------H----HHHHHHHHHHHHCCCCeEEEEEC
Confidence            65 77899999997631           1    12345556665 56666665554

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=98.59  E-value=5.6e-07  Score=84.31  Aligned_cols=114  Identities=14%  Similarity=0.100  Sum_probs=78.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G--~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      |+|.|+||+|++|..++..|+..|  .+|+++++++.  +.....+...           ....+++...+    ..+++
T Consensus         1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~--~~~a~dL~~~-----------~~~~~l~~~~~----t~d~~   63 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHT--PGVAADLSHI-----------ETRATVKGYLG----PEQLP   63 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSH--HHHHHHHTTS-----------SSSCEEEEEES----GGGHH
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCcc--HHHHHHHhcc-----------CcCceEEEecC----CCCHH
Confidence            479999999999999999999888  78999999872  2221111110           00012222211    24578


Q ss_pred             HHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCC-EEEEEc
Q 016901          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVS  211 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~-r~V~~S  211 (380)
                      ++++++|+||+++|............+..|+..++.+++.+.+.... ++|++|
T Consensus        64 ~a~~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~s  117 (314)
T 1mld_A           64 DCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIIS  117 (314)
T ss_dssp             HHHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             HHhCCCCEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC
Confidence            88999999999998764333333445788999999999999887754 666654

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.58  E-value=2.1e-07  Score=91.87  Aligned_cols=115  Identities=17%  Similarity=0.226  Sum_probs=82.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~-G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      ++++|+|+|| |++|+.++..|++. |++|++++|+.++.+.+.+.                  .++..+.+|+.|.+++
T Consensus        22 ~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~------------------~~~~~~~~D~~d~~~l   82 (467)
T 2axq_A           22 MGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP------------------SGSKAISLDVTDDSAL   82 (467)
T ss_dssp             -CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG------------------GTCEEEECCTTCHHHH
T ss_pred             CCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh------------------cCCcEEEEecCCHHHH
Confidence            5678999997 99999999999998 78999999998877665421                  2466778999999899


Q ss_pred             HHHhcCCCEEEEccccCccccC------CCCCcchhhH--HHHHHHHHHHHHcCCCEEEEEccCCC
Q 016901          158 EPALGNASVVICCIGASEKEVF------DITGPYRIDF--QATKNLVDAATIAKVNHFIMVSSLGT  215 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv--~g~~~ll~a~~~~~v~r~V~~SS~~~  215 (380)
                      .++++++|+||||++.......      .-...+++++  ..+..+++++++.|+.   +++..+.
T Consensus        83 ~~~l~~~DvVIn~tp~~~~~~v~~a~l~~g~~vvd~~~~~p~~~~Ll~~Ak~aGv~---~i~g~G~  145 (467)
T 2axq_A           83 DKVLADNDVVISLIPYTFHPNVVKSAIRTKTDVVTSSYISPALRELEPEIVKAGIT---VMNEIGL  145 (467)
T ss_dssp             HHHHHTSSEEEECSCGGGHHHHHHHHHHHTCEEEECSCCCHHHHHHHHHHHHHTCE---EECSCBB
T ss_pred             HHHHcCCCEEEECCchhhhHHHHHHHHhcCCEEEEeecCCHHHHHHHHHHHHcCCE---EEecCCc
Confidence            9999999999999985421100      0011122222  3457788888888862   4555544

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=98.57  E-value=6.1e-07  Score=77.00  Aligned_cols=96  Identities=14%  Similarity=0.132  Sum_probs=73.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~-G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      .+++|+|+| .|.+|..+++.|.+. |++|++++|++++.+.+.+                   .++.++.+|.++.+.+
T Consensus        38 ~~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~-------------------~g~~~~~gd~~~~~~l   97 (183)
T 3c85_A           38 GHAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQHRS-------------------EGRNVISGDATDPDFW   97 (183)
T ss_dssp             TTCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH-------------------TTCCEEECCTTCHHHH
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH-------------------CCCCEEEcCCCCHHHH
Confidence            456899998 699999999999999 9999999999987766543                   4577889999998888


Q ss_pred             HHH--hcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcC-CCEEEE
Q 016901          158 EPA--LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK-VNHFIM  209 (380)
Q Consensus       158 ~~a--~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~-v~r~V~  209 (380)
                      .++  +.++|.||.+.+..               .....++..+++.+ ..+++.
T Consensus        98 ~~~~~~~~ad~vi~~~~~~---------------~~~~~~~~~~~~~~~~~~ii~  137 (183)
T 3c85_A           98 ERILDTGHVKLVLLAMPHH---------------QGNQTALEQLQRRNYKGQIAA  137 (183)
T ss_dssp             HTBCSCCCCCEEEECCSSH---------------HHHHHHHHHHHHTTCCSEEEE
T ss_pred             HhccCCCCCCEEEEeCCCh---------------HHHHHHHHHHHHHCCCCEEEE
Confidence            877  78899999987521               12344556677666 334543

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=98.50  E-value=1.3e-06  Score=77.29  Aligned_cols=73  Identities=12%  Similarity=0.135  Sum_probs=62.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      |+|+|+|+ |.+|+++++.|.++|++|+++++++++.+.+.+.                  .++.++.+|.+|.+.+.++
T Consensus         1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~------------------~~~~~i~gd~~~~~~l~~a   61 (218)
T 3l4b_C            1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK------------------LKATIIHGDGSHKEILRDA   61 (218)
T ss_dssp             CCEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH------------------SSSEEEESCTTSHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH------------------cCCeEEEcCCCCHHHHHhc
Confidence            57999995 9999999999999999999999999887665421                  3578899999999999887


Q ss_pred             -hcCCCEEEEccc
Q 016901          161 -LGNASVVICCIG  172 (380)
Q Consensus       161 -~~~~d~Vi~~Ag  172 (380)
                       +.++|+||.+.+
T Consensus        62 ~i~~ad~vi~~~~   74 (218)
T 3l4b_C           62 EVSKNDVVVILTP   74 (218)
T ss_dssp             TCCTTCEEEECCS
T ss_pred             CcccCCEEEEecC
Confidence             789999998765

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=98.48  E-value=2.5e-06  Score=69.97  Aligned_cols=74  Identities=24%  Similarity=0.183  Sum_probs=63.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ..++|+|.| .|.+|..+++.|.+.|++|+++++++++.+.+.+                   .++.++.+|.++++.++
T Consensus         6 ~~~~viIiG-~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~-------------------~g~~~i~gd~~~~~~l~   65 (140)
T 3fwz_A            6 ICNHALLVG-YGRVGSLLGEKLLASDIPLVVIETSRTRVDELRE-------------------RGVRAVLGNAANEEIMQ   65 (140)
T ss_dssp             CCSCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH-------------------TTCEEEESCTTSHHHHH
T ss_pred             CCCCEEEEC-cCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH-------------------cCCCEEECCCCCHHHHH
Confidence            346899999 5999999999999999999999999988776654                   56888999999998887


Q ss_pred             HH-hcCCCEEEEccc
Q 016901          159 PA-LGNASVVICCIG  172 (380)
Q Consensus       159 ~a-~~~~d~Vi~~Ag  172 (380)
                      ++ +.++|.||.+.+
T Consensus        66 ~a~i~~ad~vi~~~~   80 (140)
T 3fwz_A           66 LAHLECAKWLILTIP   80 (140)
T ss_dssp             HTTGGGCSEEEECCS
T ss_pred             hcCcccCCEEEEECC
Confidence            65 578999998875

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.46  E-value=5.7e-07  Score=79.87  Aligned_cols=75  Identities=17%  Similarity=0.307  Sum_probs=54.5

Q ss_pred             CCCeEEEEcC----------------CChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCC
Q 016901           79 DDNLAFVAGA----------------TGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVE  142 (380)
Q Consensus        79 ~~~~vlVtGa----------------tG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (380)
                      .+|+||||||                +|++|.+++++|+++|++|+++.|......                    ....
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~--------------------~~~~   61 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKP--------------------EPHP   61 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC--------------------CCCT
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccc--------------------cCCC
Confidence            5789999999                999999999999999999999999753100                    0013


Q ss_pred             ceEEEEcCCCCh----hcHHHHhcCCCEEEEccccCc
Q 016901          143 MLELVECDLEKR----VQIEPALGNASVVICCIGASE  175 (380)
Q Consensus       143 ~v~~~~~Dl~d~----~~~~~a~~~~d~Vi~~Ag~~~  175 (380)
                      ++.++  |+...    +.+.+.++++|++|||||...
T Consensus        62 ~~~~~--~v~s~~em~~~v~~~~~~~Dili~aAAvsD   96 (232)
T 2gk4_A           62 NLSIR--EITNTKDLLIEMQERVQDYQVLIHSMAVSD   96 (232)
T ss_dssp             TEEEE--ECCSHHHHHHHHHHHGGGCSEEEECSBCCS
T ss_pred             CeEEE--EHhHHHHHHHHHHHhcCCCCEEEEcCcccc
Confidence            45544  44443    334445678999999999654

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=98.41  E-value=1.2e-06  Score=77.58  Aligned_cols=180  Identities=11%  Similarity=0.086  Sum_probs=98.9

Q ss_pred             CCCCeEEEEcC----------------CChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCC
Q 016901           78 KDDNLAFVAGA----------------TGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPV  141 (380)
Q Consensus        78 ~~~~~vlVtGa----------------tG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (380)
                      +.+++||||||                +|++|.++++.|+++|++|+++.|+.. ..                     ..
T Consensus         6 l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~---------------------~~   63 (226)
T 1u7z_A            6 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP---------------------TP   63 (226)
T ss_dssp             TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC---------------------CC
T ss_pred             CCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc---------------------cC
Confidence            47899999999                799999999999999999999887642 10                     00


Q ss_pred             CceEEEEcCCCChhcHHH----HhcCCCEEEEccccCccccCCC-CC----------cchhhHHHHHHHHHHHHHc-CCC
Q 016901          142 EMLELVECDLEKRVQIEP----ALGNASVVICCIGASEKEVFDI-TG----------PYRIDFQATKNLVDAATIA-KVN  205 (380)
Q Consensus       142 ~~v~~~~~Dl~d~~~~~~----a~~~~d~Vi~~Ag~~~~~~~~~-~~----------~~~~nv~g~~~ll~a~~~~-~v~  205 (380)
                      .++.  ..|+++.+++.+    .++++|++|||||.....+... ..          .+.+.+.-+..++..+.+. ..+
T Consensus        64 ~g~~--~~dv~~~~~~~~~v~~~~~~~Dili~~Aav~d~~p~~~~~~KIkk~~~~~~~l~l~L~~~pdIL~~l~~~~~~~  141 (226)
T 1u7z_A           64 PFVK--RVDVMTALEMEAAVNASVQQQNIFIGCAAVADYRAATVAPEKIKKQATQGDELTIKMVKNPDIVAGVAALKDHR  141 (226)
T ss_dssp             TTEE--EEECCSHHHHHHHHHHHGGGCSEEEECCBCCSEEESSCCSSCC-------CEEEEEEEECCCHHHHHHHCSSSC
T ss_pred             CCCe--EEccCcHHHHHHHHHHhcCCCCEEEECCcccCCCCccCChHHhccccccCCceEEEEeecHHHHHHHHhhhcCC
Confidence            2333  467877654433    3568999999999654322211 10          1112222234566666553 223


Q ss_pred             EEEEEccCCCCCCCCchhhhchhhHHHHHHHHHHHHHHHCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCH
Q 016901          206 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSN  285 (380)
Q Consensus       206 r~V~~SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~  285 (380)
                      +| .++=..-.         .....|      +.+-+..+|+++++..+-.-.+-+-.........+...........+.
T Consensus       142 ~~-~VGFaaEt---------~~l~e~------A~~kL~~k~~d~ivaN~~~~~~~~f~~~~n~v~li~~~~~~~~~~~sK  205 (226)
T 1u7z_A          142 PY-VVGFAAET---------NNVEEY------ARQKRIRKNLDLICANDVSQPTQGFNSDNNALHLFWQDGDKVLPLERK  205 (226)
T ss_dssp             CE-EEEEEEES---------SSHHHH------HHHHHHHHTCSEEEEEECSSTTSSTTSSEEEEEEEETTEEEEEEEEEH
T ss_pred             cE-EEEcchhh---------chHHHH------HHHHHHhcCCCEEEEeeccccCCccCCCceEEEEEeCCCcEecCCCCH
Confidence            33 23311110         111112      233345689999999876522111000011122222221111134678


Q ss_pred             HHHHHHHHHHHh
Q 016901          286 LQVAELLACMAK  297 (380)
Q Consensus       286 ~DvA~~i~~~l~  297 (380)
                      +++|+.++..+.
T Consensus       206 ~~vA~~I~~~i~  217 (226)
T 1u7z_A          206 ELLGQLLLDEIV  217 (226)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            889998887764

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=98.34  E-value=1e-06  Score=83.27  Aligned_cols=116  Identities=15%  Similarity=0.115  Sum_probs=79.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G--~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .+++|.|+||+|+||+.++..|+..|  .+|++++.++++++.....+....+          ...++.       -..+
T Consensus         7 ~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~----------~~~~i~-------~t~d   69 (343)
T 3fi9_A            7 TEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGF----------EGLNLT-------FTSD   69 (343)
T ss_dssp             CSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCC----------TTCCCE-------EESC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcC----------CCCceE-------EcCC
Confidence            56789999999999999999999998  5899999988776654443332110          001222       1245


Q ss_pred             HHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCE--EEEEc
Q 016901          157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNH--FIMVS  211 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r--~V~~S  211 (380)
                      +.++++++|+||.+||.......+....+..|+...+.+++.+.+.+.+-  ++.+|
T Consensus        70 ~~~al~dADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvs  126 (343)
T 3fi9_A           70 IKEALTDAKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIF  126 (343)
T ss_dssp             HHHHHTTEEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECS
T ss_pred             HHHHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEec
Confidence            67889999999999986533222223346789999999999998887554  44554

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=98.25  E-value=3.6e-06  Score=75.15  Aligned_cols=94  Identities=15%  Similarity=0.105  Sum_probs=71.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ..++|+|.|+ |.+|+.+++.|.+.|+ |++++|+++..+.+.                    .++.++.+|.+|++.++
T Consensus         8 ~~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~--------------------~~~~~i~gd~~~~~~l~   65 (234)
T 2aef_A            8 KSRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR--------------------SGANFVHGDPTRVSDLE   65 (234)
T ss_dssp             --CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH--------------------TTCEEEESCTTCHHHHH
T ss_pred             CCCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh--------------------cCCeEEEcCCCCHHHHH
Confidence            3468999996 9999999999999999 999999987765432                    35889999999999998


Q ss_pred             HH-hcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCC-EEEE
Q 016901          159 PA-LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIM  209 (380)
Q Consensus       159 ~a-~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~-r~V~  209 (380)
                      ++ +.++|.||.+.+..           +.|+    .++..+++.+.+ ++|.
T Consensus        66 ~a~i~~ad~vi~~~~~d-----------~~n~----~~~~~a~~~~~~~~iia  103 (234)
T 2aef_A           66 KANVRGARAVIVDLESD-----------SETI----HCILGIRKIDESVRIIA  103 (234)
T ss_dssp             HTTCTTCSEEEECCSCH-----------HHHH----HHHHHHHHHCSSSEEEE
T ss_pred             hcCcchhcEEEEcCCCc-----------HHHH----HHHHHHHHHCCCCeEEE
Confidence            77 88999999886421           2233    345566666654 5543

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.22  E-value=2e-06  Score=74.63  Aligned_cols=98  Identities=20%  Similarity=0.173  Sum_probs=65.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc--
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ--  156 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~--  156 (380)
                      .+++|+|+||+|.||..+++.+...|++|++++|++++.+...+    +               +... ..|..+.+.  
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~----~---------------g~~~-~~d~~~~~~~~   97 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSR----L---------------GVEY-VGDSRSVDFAD   97 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHT----T---------------CCSE-EEETTCSTHHH
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----c---------------CCCE-EeeCCcHHHHH
Confidence            56799999999999999999999999999999998776544321    1               1111 236665433  


Q ss_pred             -HHHHh--cCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCC
Q 016901          157 -IEPAL--GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (380)
Q Consensus       157 -~~~a~--~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~  214 (380)
                       +.+..  .++|+||+|+|..                .....++.++..  +++|.+++..
T Consensus        98 ~~~~~~~~~~~D~vi~~~g~~----------------~~~~~~~~l~~~--G~~v~~g~~~  140 (198)
T 1pqw_A           98 EILELTDGYGVDVVLNSLAGE----------------AIQRGVQILAPG--GRFIELGKKD  140 (198)
T ss_dssp             HHHHHTTTCCEEEEEECCCTH----------------HHHHHHHTEEEE--EEEEECSCGG
T ss_pred             HHHHHhCCCCCeEEEECCchH----------------HHHHHHHHhccC--CEEEEEcCCC
Confidence             33333  2599999998721                123344444443  4899888754

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.17  E-value=1.1e-05  Score=75.39  Aligned_cols=81  Identities=15%  Similarity=0.152  Sum_probs=64.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC---chhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCC
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRS---VQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK  153 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d  153 (380)
                      ..+++++|+|+ |++|+.++..|++.|. +|+++.|+   .++.+++.+.+...              ....+...++.+
T Consensus       152 l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~--------------~~~~~~~~~~~~  216 (315)
T 3tnl_A          152 IIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSK--------------TDCKAQLFDIED  216 (315)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHH--------------SSCEEEEEETTC
T ss_pred             ccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhh--------------cCCceEEeccch
Confidence            46789999996 8999999999999998 89999999   77777776655432              123344456777


Q ss_pred             hhcHHHHhcCCCEEEEcccc
Q 016901          154 RVQIEPALGNASVVICCIGA  173 (380)
Q Consensus       154 ~~~~~~a~~~~d~Vi~~Ag~  173 (380)
                      .+++.+.+.++|+|||+...
T Consensus       217 ~~~l~~~l~~aDiIINaTp~  236 (315)
T 3tnl_A          217 HEQLRKEIAESVIFTNATGV  236 (315)
T ss_dssp             HHHHHHHHHTCSEEEECSST
T ss_pred             HHHHHhhhcCCCEEEECccC
Confidence            77788889999999998753

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=98.16  E-value=2.2e-05  Score=73.66  Aligned_cols=116  Identities=17%  Similarity=0.140  Sum_probs=79.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~--~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ..++|.|+|+ |.+|..++..|+..|.  +|+++++++++++.....+... .+.        ...++.+...|      
T Consensus         4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~-~~~--------~~~~v~i~~~~------   67 (326)
T 3pqe_A            4 HVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHG-KAF--------APQPVKTSYGT------   67 (326)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHT-GGG--------SSSCCEEEEEC------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhc-ccc--------ccCCeEEEeCc------
Confidence            4678999995 9999999999999986  8999999988776654444332 110        00234443333      


Q ss_pred             HHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCC-EEEEEc
Q 016901          157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVS  211 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~-r~V~~S  211 (380)
                       .++++++|+||.+||.......+....+..|....+.+++.+.+.+.+ .++.+|
T Consensus        68 -~~a~~~aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvt  122 (326)
T 3pqe_A           68 -YEDCKDADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVAT  122 (326)
T ss_dssp             -GGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             -HHHhCCCCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcC
Confidence             246889999999998643322222233677888899999999888755 444444

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=98.13  E-value=1.5e-05  Score=77.43  Aligned_cols=74  Identities=24%  Similarity=0.249  Sum_probs=64.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ..++|+|.| .|.+|+.+++.|.+.|++|++++++++..+.+.+                   .++.++.||.++++.++
T Consensus         3 ~~~~viIiG-~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~-------------------~g~~vi~GDat~~~~L~   62 (413)
T 3l9w_A            3 HGMRVIIAG-FGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK-------------------FGMKVFYGDATRMDLLE   62 (413)
T ss_dssp             -CCSEEEEC-CSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH-------------------TTCCCEESCTTCHHHHH
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh-------------------CCCeEEEcCCCCHHHHH
Confidence            346799999 5999999999999999999999999988776654                   56788999999999998


Q ss_pred             HH-hcCCCEEEEccc
Q 016901          159 PA-LGNASVVICCIG  172 (380)
Q Consensus       159 ~a-~~~~d~Vi~~Ag  172 (380)
                      ++ +.++|+||.+.+
T Consensus        63 ~agi~~A~~viv~~~   77 (413)
T 3l9w_A           63 SAGAAKAEVLINAID   77 (413)
T ss_dssp             HTTTTTCSEEEECCS
T ss_pred             hcCCCccCEEEECCC
Confidence            87 788999998875

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=98.13  E-value=2.4e-05  Score=73.32  Aligned_cols=116  Identities=16%  Similarity=0.171  Sum_probs=72.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~--~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~  155 (380)
                      ..+++|.|+|+ |.+|..++..|+..|.  +|+++++++++++.....+.....          ....+.+..+|     
T Consensus         7 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~----------~~~~~~i~~~~-----   70 (326)
T 3vku_A            7 KDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALP----------FTSPKKIYSAE-----   70 (326)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGG----------GSCCCEEEECC-----
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhh----------hcCCcEEEECc-----
Confidence            36689999995 9999999999999986  899999998877765544443210          01234443332     


Q ss_pred             cHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCE-EEEEc
Q 016901          156 QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNH-FIMVS  211 (380)
Q Consensus       156 ~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r-~V~~S  211 (380)
                        .++++++|+||++||.......+....++.|..-.+.+.+.+.+...+- ++.+|
T Consensus        71 --~~a~~~aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvt  125 (326)
T 3vku_A           71 --YSDAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA  125 (326)
T ss_dssp             --GGGGTTCSEEEECCCCC----------------CHHHHHHHHHTTTCCSEEEECS
T ss_pred             --HHHhcCCCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEcc
Confidence              3568899999999996543333344557788888899999998877553 44443

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=98.05  E-value=8.8e-06  Score=71.32  Aligned_cols=73  Identities=19%  Similarity=0.307  Sum_probs=54.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      |+|+|+||+|++|+++++.|++.|++|++++|++++.+.+.+.+... +            .     .+|+. ..++.++
T Consensus         1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~------------~-----~~~~~-~~~~~~~   61 (212)
T 1jay_A            1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRI-A------------G-----DASIT-GMKNEDA   61 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHH-H------------S-----SCCEE-EEEHHHH
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccc-c------------c-----cCCCC-hhhHHHH
Confidence            47999999999999999999999999999999988766654422110 0            0     12222 2456777


Q ss_pred             hcCCCEEEEccc
Q 016901          161 LGNASVVICCIG  172 (380)
Q Consensus       161 ~~~~d~Vi~~Ag  172 (380)
                      ++++|+||++..
T Consensus        62 ~~~~D~Vi~~~~   73 (212)
T 1jay_A           62 AEACDIAVLTIP   73 (212)
T ss_dssp             HHHCSEEEECSC
T ss_pred             HhcCCEEEEeCC
Confidence            889999999975

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=98.05  E-value=8.8e-06  Score=75.93  Aligned_cols=116  Identities=15%  Similarity=0.085  Sum_probs=74.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      ++|.|+|| |.+|..++..|+..|+ +|+++++++++++.....+.......         ....++..     ..++ +
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~---------~~~~~i~~-----t~d~-~   66 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIE---------GFDVRVTG-----TNNY-A   66 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHH---------TCCCCEEE-----ESCG-G
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhc---------CCCeEEEE-----CCCH-H
Confidence            68999998 9999999999999996 99999988877664433332210000         01122211     1224 5


Q ss_pred             HhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEcc
Q 016901          160 ALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (380)
Q Consensus       160 a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS  212 (380)
                      +++++|+||.++|...............|....+.+.+.+.+.+...+|.+.|
T Consensus        67 a~~~aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~t  119 (309)
T 1ur5_A           67 DTANSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVN  119 (309)
T ss_dssp             GGTTCSEEEECCCC--------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECC
T ss_pred             HHCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcC
Confidence            68899999999986533222222335667888888999888887666665655

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.02  E-value=1.3e-05  Score=75.38  Aligned_cols=74  Identities=20%  Similarity=0.233  Sum_probs=55.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      .+++||||||+|.||..+++.+...|++|++++|++++.+...+    ++               .. ...|.++.+++.
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~----~g---------------~~-~~~d~~~~~~~~  204 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQ----IG---------------FD-AAFNYKTVNSLE  204 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TT---------------CS-EEEETTSCSCHH
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh----cC---------------Cc-EEEecCCHHHHH
Confidence            56899999999999999999999999999999998876655421    11               11 124766634444


Q ss_pred             HHh-----cCCCEEEEccc
Q 016901          159 PAL-----GNASVVICCIG  172 (380)
Q Consensus       159 ~a~-----~~~d~Vi~~Ag  172 (380)
                      +.+     +++|+||+|+|
T Consensus       205 ~~~~~~~~~~~d~vi~~~g  223 (333)
T 1v3u_A          205 EALKKASPDGYDCYFDNVG  223 (333)
T ss_dssp             HHHHHHCTTCEEEEEESSC
T ss_pred             HHHHHHhCCCCeEEEECCC
Confidence            333     36999999998

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.01  E-value=1.6e-05  Score=75.22  Aligned_cols=75  Identities=24%  Similarity=0.197  Sum_probs=55.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      .+++|||+||+|.||..+++.+...|++|++++|++++.+...+    +               +... ..|+++.+++.
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~----~---------------g~~~-~~d~~~~~~~~  228 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRS----I---------------GGEV-FIDFTKEKDIV  228 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHH----T---------------TCCE-EEETTTCSCHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHH----c---------------CCce-EEecCccHhHH
Confidence            56899999999999999999999999999999998877654322    1               1111 23776544554


Q ss_pred             HHhc-----CCCEEEEcccc
Q 016901          159 PALG-----NASVVICCIGA  173 (380)
Q Consensus       159 ~a~~-----~~d~Vi~~Ag~  173 (380)
                      +.+.     ++|+||+++|.
T Consensus       229 ~~~~~~~~~~~D~vi~~~g~  248 (347)
T 2hcy_A          229 GAVLKATDGGAHGVINVSVS  248 (347)
T ss_dssp             HHHHHHHTSCEEEEEECSSC
T ss_pred             HHHHHHhCCCCCEEEECCCc
Confidence            4432     69999999873

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=97.98  E-value=2e-05  Score=73.92  Aligned_cols=117  Identities=14%  Similarity=0.076  Sum_probs=77.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEE-EcCCCChh
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELV-ECDLEKRV  155 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~Dl~d~~  155 (380)
                      |++++|.|+|| |.+|..++..|+..|+ +|+++++++++.+.....+.......     +    ....+. ..|     
T Consensus         5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~-----~----~~~~v~~t~d-----   69 (324)
T 3gvi_A            5 MARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVD-----G----FDAKFTGAND-----   69 (324)
T ss_dssp             -CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHH-----T----CCCCEEEESS-----
T ss_pred             CcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhc-----C----CCCEEEEeCC-----
Confidence            35679999997 9999999999999998 99999999887654443343321100     0    112222 122     


Q ss_pred             cHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCC-EEEEEc
Q 016901          156 QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVS  211 (380)
Q Consensus       156 ~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~-r~V~~S  211 (380)
                       . ++++++|+||.++|............+..|..-.+.+++.+.+.+.. .++.+|
T Consensus        70 -~-~a~~~aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvt  124 (324)
T 3gvi_A           70 -Y-AAIEGADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICIT  124 (324)
T ss_dssp             -G-GGGTTCSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             -H-HHHCCCCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecC
Confidence             3 67889999999998653332233444677888889999999887754 455544

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.98  E-value=5.2e-05  Score=68.41  Aligned_cols=106  Identities=14%  Similarity=0.248  Sum_probs=75.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCc-------------------hhHHHHHHHHHhhhhcccccccCC
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKGI  138 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~  138 (380)
                      .+++|+|.| .|.+|+++++.|++.|. +|++++++.                   .+.+.+.+.+...+-         
T Consensus        30 ~~~~VlVvG-~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np---------   99 (249)
T 1jw9_B           30 KDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINP---------   99 (249)
T ss_dssp             HHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCT---------
T ss_pred             hCCeEEEEe-eCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCC---------
Confidence            456899999 68999999999999996 899999987                   677777666655421         


Q ss_pred             CCCCceEEEEcCCCChhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccC
Q 016901          139 QPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL  213 (380)
Q Consensus       139 ~~~~~v~~~~~Dl~d~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~  213 (380)
                        .-+++.+..++++ +.+.+.++++|+||.+..               |...-..+.++|.+.++ .+|+.+..
T Consensus       100 --~~~v~~~~~~~~~-~~~~~~~~~~DvVi~~~d---------------~~~~~~~l~~~~~~~~~-p~i~~~~~  155 (249)
T 1jw9_B          100 --HIAITPVNALLDD-AELAALIAEHDLVLDCTD---------------NVAVRNQLNAGCFAAKV-PLVSGAAI  155 (249)
T ss_dssp             --TSEEEEECSCCCH-HHHHHHHHTSSEEEECCS---------------SHHHHHHHHHHHHHHTC-CEEEEEEE
T ss_pred             --CcEEEEEeccCCH-hHHHHHHhCCCEEEEeCC---------------CHHHHHHHHHHHHHcCC-CEEEeeec
Confidence              1245566666653 456778899999999864               22233456677777775 36665543

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=97.96  E-value=9.5e-06  Score=77.66  Aligned_cols=77  Identities=18%  Similarity=0.211  Sum_probs=60.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      ..+++|+|+|+ |.||..+++.|...|++|++++|++++.+...+.+            +    ..   +.+|..+.+++
T Consensus       164 l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~------------g----~~---~~~~~~~~~~l  223 (369)
T 2eez_A          164 VAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF------------G----GR---VITLTATEANI  223 (369)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT------------T----TS---EEEEECCHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc------------C----ce---EEEecCCHHHH
Confidence            35689999998 99999999999999999999999987765543211            0    11   34577777888


Q ss_pred             HHHhcCCCEEEEccccC
Q 016901          158 EPALGNASVVICCIGAS  174 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag~~  174 (380)
                      .+++.++|+||+|++..
T Consensus       224 ~~~~~~~DvVi~~~g~~  240 (369)
T 2eez_A          224 KKSVQHADLLIGAVLVP  240 (369)
T ss_dssp             HHHHHHCSEEEECCC--
T ss_pred             HHHHhCCCEEEECCCCC
Confidence            89999999999999854

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=97.95  E-value=3.4e-05  Score=72.68  Aligned_cols=118  Identities=13%  Similarity=0.049  Sum_probs=77.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      .|+|.|+|| |.+|..++..|+..|+ +|+++++++++++.....+......       .....++..       ..+++
T Consensus         9 ~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~-------~~~~~~i~~-------t~d~~   73 (331)
T 1pzg_A            9 RKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSV-------VDTNVSVRA-------EYSYE   73 (331)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHH-------TTCCCCEEE-------ECSHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhc-------cCCCCEEEE-------eCCHH
Confidence            468999997 9999999999999998 9999999988776633333221100       000022221       13466


Q ss_pred             HHhcCCCEEEEccccCccccC-----CCCCcchhhHHHHHHHHHHHHHcCCCEEEEEcc
Q 016901          159 PALGNASVVICCIGASEKEVF-----DITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~~~~~-----~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS  212 (380)
                      ++++++|+||.++|.......     ........|..-.+.+++.+.+....-++.+.|
T Consensus        74 ea~~~aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~t  132 (331)
T 1pzg_A           74 AALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVT  132 (331)
T ss_dssp             HHHTTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             HHhCCCCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEc
Confidence            688999999999985532211     222335567777888888888776554544444

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=97.95  E-value=1.8e-05  Score=72.30  Aligned_cols=76  Identities=20%  Similarity=0.259  Sum_probs=55.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      ..+++++|+|+ |.+|+.++..|++.|++|++..|+.++.+++.+.+...              ..+.  ..|+   +++
T Consensus       117 l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~--------------~~~~--~~~~---~~~  176 (271)
T 1nyt_A          117 RPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHT--------------GSIQ--ALSM---DEL  176 (271)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGG--------------SSEE--ECCS---GGG
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhcc--------------CCee--EecH---HHh
Confidence            35789999997 88999999999999999999999998877766533210              1221  2333   333


Q ss_pred             HHHhcCCCEEEEccccCc
Q 016901          158 EPALGNASVVICCIGASE  175 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag~~~  175 (380)
                      .+  +++|+||+|++...
T Consensus       177 ~~--~~~DivVn~t~~~~  192 (271)
T 1nyt_A          177 EG--HEFDLIINATSSGI  192 (271)
T ss_dssp             TT--CCCSEEEECCSCGG
T ss_pred             cc--CCCCEEEECCCCCC
Confidence            32  68999999998643

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=97.92  E-value=4.4e-05  Score=70.20  Aligned_cols=79  Identities=20%  Similarity=0.243  Sum_probs=61.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ..+++++|+|+ |++|+.++..|++.|. +|++.+|+.++.+++.+.+....             ..+.+...++   ++
T Consensus       125 l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~-------------~~~~i~~~~~---~~  187 (283)
T 3jyo_A          125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAV-------------GREAVVGVDA---RG  187 (283)
T ss_dssp             CCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHH-------------TSCCEEEECS---TT
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhc-------------CCceEEEcCH---HH
Confidence            46789999996 9999999999999998 79999999999888877665432             2233333343   45


Q ss_pred             HHHHhcCCCEEEEcccc
Q 016901          157 IEPALGNASVVICCIGA  173 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag~  173 (380)
                      +.+++.++|.|||+...
T Consensus       188 l~~~l~~~DiVInaTp~  204 (283)
T 3jyo_A          188 IEDVIAAADGVVNATPM  204 (283)
T ss_dssp             HHHHHHHSSEEEECSST
T ss_pred             HHHHHhcCCEEEECCCC
Confidence            66778889999998753

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=97.91  E-value=2.9e-05  Score=73.15  Aligned_cols=92  Identities=14%  Similarity=0.116  Sum_probs=72.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      .++++|.|+ |.+|+.+++.|.++|+ |++++++++..+ +.+                   .++.++.||.+|++.+++
T Consensus       115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~-------------------~~~~~i~gd~~~~~~L~~  172 (336)
T 1lnq_A          115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VLR-------------------SGANFVHGDPTRVSDLEK  172 (336)
T ss_dssp             -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH-------------------TTCEEEESCTTSHHHHHH
T ss_pred             cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh-------------------CCcEEEEeCCCCHHHHHh
Confidence            458999995 9999999999999999 999999998776 543                   578899999999999998


Q ss_pred             H-hcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCC-EEE
Q 016901          160 A-LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFI  208 (380)
Q Consensus       160 a-~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~-r~V  208 (380)
                      + ++++|.||.+.+..           +.|    ..++..+++.+.+ +++
T Consensus       173 a~i~~a~~vi~~~~~d-----------~~n----~~~~~~ar~~~~~~~ii  208 (336)
T 1lnq_A          173 ANVRGARAVIVDLESD-----------SET----IHCILGIRKIDESVRII  208 (336)
T ss_dssp             TCSTTEEEEEECCSSH-----------HHH----HHHHHHHHTTCTTSEEE
T ss_pred             cChhhccEEEEcCCcc-----------HHH----HHHHHHHHHHCCCCeEE
Confidence            8 78999999876421           223    3455666777665 544

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=97.90  E-value=0.00014  Score=68.04  Aligned_cols=118  Identities=16%  Similarity=0.173  Sum_probs=76.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G--~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~  155 (380)
                      +++++|.|+|| |.+|..++..|+.+|  .+|.+++.++++++.....+... .. .   .    ...+.+.. |  +  
T Consensus         4 m~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~-~~-~---~----~~~~~v~~-~--~--   68 (317)
T 3d0o_A            4 FKGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHA-TP-Y---S----PTTVRVKA-G--E--   68 (317)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHH-GG-G---S----SSCCEEEE-C--C--
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhh-hh-h---c----CCCeEEEe-C--C--
Confidence            45679999998 999999999999888  48999998887665433333221 10 0   0    02333332 2  1  


Q ss_pred             cHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEcc
Q 016901          156 QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (380)
Q Consensus       156 ~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS  212 (380)
                        .++++++|+||.++|...............|..-.+.+.+.+.+....-+|.+.|
T Consensus        69 --~~a~~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t  123 (317)
T 3d0o_A           69 --YSDCHDADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVAT  123 (317)
T ss_dssp             --GGGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             --HHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Confidence              4568899999999986533222112234667777888888888877554444444

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=97.88  E-value=0.00012  Score=67.55  Aligned_cols=115  Identities=12%  Similarity=0.042  Sum_probs=76.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~--~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      |+|.|+|| |.+|..++..|+..|+  +|+++++++++++.....+......         ......+...     .+ .
T Consensus         1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~---------~~~~~~i~~t-----~d-~   64 (294)
T 1oju_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAG---------IDKYPKIVGG-----AD-Y   64 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHT---------TTCCCEEEEE-----SC-G
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhh---------cCCCCEEEEe-----CC-H
Confidence            57999998 9999999999999997  8999999998765333323222100         0012222211     11 4


Q ss_pred             HHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCC-EEEEEc
Q 016901          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVS  211 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~-r~V~~S  211 (380)
                      ++++++|+||.++|.......+....+..|..-.+.+++.+.+.+.. .++.+|
T Consensus        65 ~a~~~aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvs  118 (294)
T 1oju_A           65 SLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT  118 (294)
T ss_dssp             GGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred             HHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC
Confidence            67889999999998653322222234677888888999999888755 455444

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=97.88  E-value=0.00012  Score=68.38  Aligned_cols=117  Identities=14%  Similarity=0.072  Sum_probs=77.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      .+++|.|+| +|.+|..++..|+..|. +|+++++++++.+.....+.......         .....+...+  |    
T Consensus         4 ~~~kI~iiG-aG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~---------~~~~~v~~t~--d----   67 (321)
T 3p7m_A            4 ARKKITLVG-AGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIE---------GVDFKVRGTN--D----   67 (321)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHH---------TCCCCEEEES--C----
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhc---------CCCcEEEEcC--C----
Confidence            457899999 59999999999999987 99999999887665444443321000         0122222111  1    


Q ss_pred             HHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCC-EEEEEc
Q 016901          158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVS  211 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~-r~V~~S  211 (380)
                      .++++++|+||.++|............+..|..-.+.+++.+.+.... .++.+|
T Consensus        68 ~~a~~~aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt  122 (321)
T 3p7m_A           68 YKDLENSDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICIT  122 (321)
T ss_dssp             GGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             HHHHCCCCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEec
Confidence            257889999999998653322222233567888889999999887755 455544

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.87  E-value=1.8e-05  Score=74.22  Aligned_cols=98  Identities=14%  Similarity=0.151  Sum_probs=66.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc--
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ--  156 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~--  156 (380)
                      .+++|||+||+|.||..+++.+...|++|++++|++++.+.+.+    ++             ...   ..|..+.+.  
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~----~g-------------~~~---~~~~~~~~~~~  199 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK----AG-------------AWQ---VINYREEDLVE  199 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH----HT-------------CSE---EEETTTSCHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----cC-------------CCE---EEECCCccHHH
Confidence            56899999999999999999999999999999999877655432    11             111   235555433  


Q ss_pred             -HHHHh--cCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCC
Q 016901          157 -IEPAL--GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (380)
Q Consensus       157 -~~~a~--~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~  214 (380)
                       +.+..  .++|+||+|+|..                .....++.++..  .++|.+++..
T Consensus       200 ~~~~~~~~~~~D~vi~~~g~~----------------~~~~~~~~l~~~--G~iv~~g~~~  242 (327)
T 1qor_A          200 RLKEITGGKKVRVVYDSVGRD----------------TWERSLDCLQRR--GLMVSFGNSS  242 (327)
T ss_dssp             HHHHHTTTCCEEEEEECSCGG----------------GHHHHHHTEEEE--EEEEECCCTT
T ss_pred             HHHHHhCCCCceEEEECCchH----------------HHHHHHHHhcCC--CEEEEEecCC
Confidence             33333  2599999999821                123344444433  4788888754

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=97.85  E-value=0.00027  Score=66.33  Aligned_cols=115  Identities=15%  Similarity=0.142  Sum_probs=81.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHHHhhh-hcccccccCCCCCCceEEEEcCCCChh
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMK-LDGELANKGIQPVEMLELVECDLEKRV  155 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~--~V~~l~R~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~Dl~d~~  155 (380)
                      ..++|.|+|+ |.+|..++..|+.+|.  +|+++++++++++.....+.... +.           ....++..+  |  
T Consensus        18 ~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~-----------~~~~i~~~~--d--   81 (331)
T 4aj2_A           18 PQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFL-----------KTPKIVSSK--D--   81 (331)
T ss_dssp             CSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGC-----------SCCEEEECS--S--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhcc-----------CCCeEEEcC--C--
Confidence            5679999997 9999999999999996  89999999887766555444321 10           112222221  2  


Q ss_pred             cHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCC-EEEEEc
Q 016901          156 QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVS  211 (380)
Q Consensus       156 ~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~-r~V~~S  211 (380)
                       ++ .++++|+||.+||.......+..+.++.|..-.+.+.+.+.+.... .++.+|
T Consensus        82 -~~-~~~~aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvt  136 (331)
T 4aj2_A           82 -YS-VTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVS  136 (331)
T ss_dssp             -GG-GGTTEEEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             -HH-HhCCCCEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence             33 5889999999999764443444556888999999999999888655 455444

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=97.85  E-value=8e-05  Score=69.31  Aligned_cols=81  Identities=15%  Similarity=0.154  Sum_probs=60.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC---chhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCC
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRS---VQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK  153 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d  153 (380)
                      ..+++++|+|+ |++|+.++..|++.|. +|++..|+   .++++++.+.+...              ....+...++.+
T Consensus       146 l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~--------------~~~~v~~~~~~~  210 (312)
T 3t4e_A          146 MRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNEN--------------TDCVVTVTDLAD  210 (312)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHH--------------SSCEEEEEETTC
T ss_pred             cCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhc--------------cCcceEEechHh
Confidence            36789999996 9999999999999997 89999999   77777766655431              123333445555


Q ss_pred             hhcHHHHhcCCCEEEEcccc
Q 016901          154 RVQIEPALGNASVVICCIGA  173 (380)
Q Consensus       154 ~~~~~~a~~~~d~Vi~~Ag~  173 (380)
                      .+.+.+.+.++|+|||+.+.
T Consensus       211 l~~~~~~l~~~DiIINaTp~  230 (312)
T 3t4e_A          211 QHAFTEALASADILTNGTKV  230 (312)
T ss_dssp             HHHHHHHHHHCSEEEECSST
T ss_pred             hhhhHhhccCceEEEECCcC
Confidence            44446677889999998754

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=97.84  E-value=3.6e-05  Score=73.05  Aligned_cols=74  Identities=15%  Similarity=0.221  Sum_probs=54.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh---
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV---  155 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~---  155 (380)
                      .+++|+|+||+|.||..+++.+...|++|++++|++++.+...+    ++               .. ...|..+.+   
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~g---------------a~-~~~d~~~~~~~~  229 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQ----NG---------------AH-EVFNHREVNYID  229 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TT---------------CS-EEEETTSTTHHH
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH----cC---------------CC-EEEeCCCchHHH
Confidence            56899999999999999999999999999999999877664322    11               11 123555533   


Q ss_pred             cHHHHhc--CCCEEEEccc
Q 016901          156 QIEPALG--NASVVICCIG  172 (380)
Q Consensus       156 ~~~~a~~--~~d~Vi~~Ag  172 (380)
                      .+.+...  ++|+||+|+|
T Consensus       230 ~~~~~~~~~~~D~vi~~~G  248 (351)
T 1yb5_A          230 KIKKYVGEKGIDIIIEMLA  248 (351)
T ss_dssp             HHHHHHCTTCEEEEEESCH
T ss_pred             HHHHHcCCCCcEEEEECCC
Confidence            2333333  6999999997

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=97.84  E-value=2.9e-05  Score=73.30  Aligned_cols=75  Identities=16%  Similarity=0.263  Sum_probs=54.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      .+++|||+||+|.||..+++.+...|++|++++|++++.+.+.+   ++               +... ..|..+.+++.
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~---~~---------------g~~~-~~d~~~~~~~~  215 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKT---KF---------------GFDD-AFNYKEESDLT  215 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH---TS---------------CCSE-EEETTSCSCSH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---Hc---------------CCce-EEecCCHHHHH
Confidence            56899999999999999999999999999999999877655431   11               1111 23665543333


Q ss_pred             HHh-----cCCCEEEEccc
Q 016901          159 PAL-----GNASVVICCIG  172 (380)
Q Consensus       159 ~a~-----~~~d~Vi~~Ag  172 (380)
                      +.+     +++|+||+|+|
T Consensus       216 ~~~~~~~~~~~d~vi~~~g  234 (345)
T 2j3h_A          216 AALKRCFPNGIDIYFENVG  234 (345)
T ss_dssp             HHHHHHCTTCEEEEEESSC
T ss_pred             HHHHHHhCCCCcEEEECCC
Confidence            333     36999999987

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=97.83  E-value=0.0003  Score=65.72  Aligned_cols=114  Identities=12%  Similarity=0.133  Sum_probs=75.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~--~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      +.++|.|+|| |.+|..++..|+..+.  +|+++++++++++.....+.... .         ....+.+.. |  +   
T Consensus         4 ~~~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~-~---------~~~~~~v~~-~--~---   66 (318)
T 1ez4_A            4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQ-A---------FTAPKKIYS-G--E---   66 (318)
T ss_dssp             TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGG-G---------GSCCCEEEE-C--C---
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHH-H---------hcCCeEEEE-C--C---
Confidence            3478999998 9999999999998885  89999998887775444443321 0         012333332 2  1   


Q ss_pred             HHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCC-EEEEE
Q 016901          157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMV  210 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~-r~V~~  210 (380)
                       .++++++|+||.++|............+..|+...+.+++.+.+.+.. .++.+
T Consensus        67 -~~a~~~aDvVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~  120 (318)
T 1ez4_A           67 -YSDCKDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVA  120 (318)
T ss_dssp             -GGGGTTCSEEEECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred             -HHHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEe
Confidence             456889999999998654332333445678889999999999888755 44444

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=97.82  E-value=2.7e-05  Score=73.21  Aligned_cols=98  Identities=15%  Similarity=0.143  Sum_probs=66.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh---
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV---  155 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~---  155 (380)
                      .+++|+|+||+|.||..+++.+...|++|++++|++++.+.+.+    ++             ...   ..|.++.+   
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~----~g-------------~~~---~~d~~~~~~~~  204 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARK----LG-------------CHH---TINYSTQDFAE  204 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----HT-------------CSE---EEETTTSCHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cC-------------CCE---EEECCCHHHHH
Confidence            56899999999999999999999999999999999876655432    11             111   23555533   


Q ss_pred             cHHHHh--cCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCC
Q 016901          156 QIEPAL--GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (380)
Q Consensus       156 ~~~~a~--~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~  214 (380)
                      .+.+..  .++|+||+|+|..                .....++.++..  +++|.++...
T Consensus       205 ~i~~~~~~~~~d~vi~~~g~~----------------~~~~~~~~l~~~--G~iv~~g~~~  247 (333)
T 1wly_A          205 VVREITGGKGVDVVYDSIGKD----------------TLQKSLDCLRPR--GMCAAYGHAS  247 (333)
T ss_dssp             HHHHHHTTCCEEEEEECSCTT----------------THHHHHHTEEEE--EEEEECCCTT
T ss_pred             HHHHHhCCCCCeEEEECCcHH----------------HHHHHHHhhccC--CEEEEEecCC
Confidence            233333  3699999999841                123344444433  4788887643

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=97.82  E-value=0.00033  Score=65.36  Aligned_cols=118  Identities=16%  Similarity=0.182  Sum_probs=75.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~--~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~  155 (380)
                      .+.++|.|+|+ |.+|..++..|+..|.  +|+++++++++.+.....+.... .        .....+.+.. |  +  
T Consensus         4 ~~~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~-~--------~~~~~~~i~~-~--~--   68 (316)
T 1ldn_A            4 NGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGK-V--------FAPKPVDIWH-G--D--   68 (316)
T ss_dssp             TTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHT-T--------SSSSCCEEEE-C--C--
T ss_pred             CCCCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHh-h--------hcCCCeEEEc-C--c--
Confidence            35579999998 9999999999988874  89999999875554333232210 0        0001344432 1  1  


Q ss_pred             cHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEcc
Q 016901          156 QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (380)
Q Consensus       156 ~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS  212 (380)
                        .++++++|+||.+++...............|..-.+.+++.+.+....-++++-|
T Consensus        69 --~~al~~aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~t  123 (316)
T 1ldn_A           69 --YDDCRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVAT  123 (316)
T ss_dssp             --GGGTTTCSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             --HHHhCCCCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeC
Confidence              3568899999999986543322233345667777888888888776543444433

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=97.81  E-value=0.00023  Score=67.07  Aligned_cols=118  Identities=13%  Similarity=0.139  Sum_probs=76.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-------eEEEEeCCch--hHHHHHHHHHhhhhcccccccCCCCCCceEEEE
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-------RVRAGVRSVQ--RAENLVQSVKQMKLDGELANKGIQPVEMLELVE  148 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~-------~V~~l~R~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  148 (380)
                      ++.-+|.|+||+|.||..|+..|+....       ++.+++..+.  +++...-.+....++           .....+.
T Consensus        22 ~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~-----------~~~~~~~   90 (345)
T 4h7p_A           22 MSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFP-----------LLDKVVV   90 (345)
T ss_dssp             CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCT-----------TEEEEEE
T ss_pred             CCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCcc-----------CCCcEEE
Confidence            3456899999999999999988887642       6777776553  223332223222111           1122222


Q ss_pred             cCCCChhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcC-CC-EEEEEc
Q 016901          149 CDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK-VN-HFIMVS  211 (380)
Q Consensus       149 ~Dl~d~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~-v~-r~V~~S  211 (380)
                      +     .+..++++++|+||-+||.......+..+.++.|..-.+.+.+++.+.. .. +++.+|
T Consensus        91 ~-----~~~~~a~~~advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvs  150 (345)
T 4h7p_A           91 T-----ADPRVAFDGVAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVG  150 (345)
T ss_dssp             E-----SCHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             c-----CChHHHhCCCCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeC
Confidence            2     2346789999999999997654444445557889999999999988754 33 444455

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=97.79  E-value=3.7e-05  Score=73.04  Aligned_cols=98  Identities=11%  Similarity=0.184  Sum_probs=66.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh---
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV---  155 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~---  155 (380)
                      .+++|+|+||+|.||..+++.+...|++|++++|++++.+.+.+    ++             ..   ...|..+.+   
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~g-------------~~---~~~~~~~~~~~~  221 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEK----LG-------------AA---AGFNYKKEDFSE  221 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HT-------------CS---EEEETTTSCHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----cC-------------Cc---EEEecCChHHHH
Confidence            56899999999999999999999999999999999877655422    11             11   123555433   


Q ss_pred             cHHHHhc--CCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCC
Q 016901          156 QIEPALG--NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (380)
Q Consensus       156 ~~~~a~~--~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~  214 (380)
                      .+.+...  ++|+||+|+|...                ....++.++..  .++|.++...
T Consensus       222 ~~~~~~~~~~~d~vi~~~G~~~----------------~~~~~~~l~~~--G~iv~~G~~~  264 (354)
T 2j8z_A          222 ATLKFTKGAGVNLILDCIGGSY----------------WEKNVNCLALD--GRWVLYGLMG  264 (354)
T ss_dssp             HHHHHTTTSCEEEEEESSCGGG----------------HHHHHHHEEEE--EEEEECCCTT
T ss_pred             HHHHHhcCCCceEEEECCCchH----------------HHHHHHhccCC--CEEEEEeccC
Confidence            2333332  6999999998420                22334444433  4788887643

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=97.79  E-value=0.00023  Score=66.39  Aligned_cols=117  Identities=13%  Similarity=0.101  Sum_probs=76.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC--chhHHHHHHHHHhhh-hcccccccCCCCCCceEEEEcCCCC
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRS--VQRAENLVQSVKQMK-LDGELANKGIQPVEMLELVECDLEK  153 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~Dl~d  153 (380)
                      ++.++|.|+|+ |.+|..++..|+..|+ +|++++++  +.+.+.....+.... +..          ....+...+  |
T Consensus         6 ~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~----------~~~~i~~t~--d   72 (315)
T 3tl2_A            6 IKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQG----------FDANIIGTS--D   72 (315)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHT----------CCCCEEEES--C
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhcc----------CCCEEEEcC--C
Confidence            35678999996 9999999999999999 99999998  444444332222110 000          111222111  1


Q ss_pred             hhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCC-EEEEEc
Q 016901          154 RVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVS  211 (380)
Q Consensus       154 ~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~-r~V~~S  211 (380)
                          .++++++|+||.++|.......+....+..|..-.+.+.+.+.+.+.. .++.+|
T Consensus        73 ----~~a~~~aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvs  127 (315)
T 3tl2_A           73 ----YADTADSDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLT  127 (315)
T ss_dssp             ----GGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             ----HHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECC
Confidence                256889999999998654332233334677888889999999887755 445444

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=97.79  E-value=1.4e-05  Score=73.78  Aligned_cols=80  Identities=18%  Similarity=0.195  Sum_probs=56.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      ..+++++|||++ .+|+.++..|++.| +|++..|+.++.+++.+.+.....            ... .+.+|+.+   +
T Consensus       126 l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~------------~~~-~~~~d~~~---~  187 (287)
T 1nvt_A          126 VKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLN------------KKF-GEEVKFSG---L  187 (287)
T ss_dssp             CCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHT------------CCH-HHHEEEEC---T
T ss_pred             cCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcc------------ccc-ceeEEEee---H
Confidence            367899999975 99999999999999 999999998887777665532100            000 01123333   2


Q ss_pred             HHHhcCCCEEEEccccCc
Q 016901          158 EPALGNASVVICCIGASE  175 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag~~~  175 (380)
                      .+.++++|+||||+|...
T Consensus       188 ~~~~~~~DilVn~ag~~~  205 (287)
T 1nvt_A          188 DVDLDGVDIIINATPIGM  205 (287)
T ss_dssp             TCCCTTCCEEEECSCTTC
T ss_pred             HHhhCCCCEEEECCCCCC
Confidence            445678999999998643

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=97.78  E-value=0.00012  Score=68.28  Aligned_cols=114  Identities=17%  Similarity=0.164  Sum_probs=74.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHC-C--CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKL-G--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~-G--~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      |+|.|+||+|.||..++..|..+ +  .++++++.++ +.+...-.+...             .....+... .+  ...
T Consensus         1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~-------------~~~~~v~~~-~~--~~~   63 (312)
T 3hhp_A            1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHI-------------PTAVKIKGF-SG--EDA   63 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTS-------------CSSEEEEEE-CS--SCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCC-------------CCCceEEEe-cC--CCc
Confidence            57999999999999999999876 5  5788988876 333222222211             012222111 01  123


Q ss_pred             HHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCC-EEEEEc
Q 016901          158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVS  211 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~-r~V~~S  211 (380)
                      .++++++|+||.+||.......+..+.++.|..-.+.+.+.+.+...+ .++.+|
T Consensus        64 ~~~~~~aDivii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvt  118 (312)
T 3hhp_A           64 TPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT  118 (312)
T ss_dssp             HHHHTTCSEEEECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             HHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEec
Confidence            567889999999998654333333344678999899999999887654 455554

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=97.77  E-value=0.00035  Score=64.87  Aligned_cols=114  Identities=22%  Similarity=0.166  Sum_probs=69.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~--~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      |+|.|+|| |.+|..++..|+..|+  +|+++++++++.+.....+...          ........+...   +    .
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~----------~~~~~~~~i~~~---~----~   62 (304)
T 2v6b_A            1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHA----------APVSHGTRVWHG---G----H   62 (304)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTS----------CCTTSCCEEEEE---C----G
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhh----------hhhcCCeEEEEC---C----H
Confidence            47999997 9999999999999998  9999999987655433222110          000122333221   2    2


Q ss_pred             HHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEcc
Q 016901          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS  212 (380)
                      ++++++|+||.+++..........+....|+...+.+++.+.+.....++.+.|
T Consensus        63 ~a~~~aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~t  116 (304)
T 2v6b_A           63 SELADAQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTS  116 (304)
T ss_dssp             GGGTTCSEEEECC------------CHHHHHHHHHHHHHHHHHHCSSSEEEECS
T ss_pred             HHhCCCCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEec
Confidence            468899999999975433222333456778888888998888766443443333

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=97.77  E-value=0.00019  Score=66.84  Aligned_cols=115  Identities=10%  Similarity=0.018  Sum_probs=75.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~--~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      |+|.|+|+ |.+|..++..|+..|.  +|+++++++++++.....+.......         .....+...|      ..
T Consensus         1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~---------~~~~~v~~~~------~~   64 (314)
T 3nep_X            1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIH---------GFDTRVTGTN------DY   64 (314)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHH---------TCCCEEEEES------SS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhcccccc---------CCCcEEEECC------CH
Confidence            57999996 9999999999999986  89999999887665444443221100         0123332112      13


Q ss_pred             HHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCC-EEEEEc
Q 016901          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVS  211 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~-r~V~~S  211 (380)
                      ++++++|+||.+||.......+....++.|..-.+.+.+.+.+.+.. .++.+|
T Consensus        65 ~a~~~aDvVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt  118 (314)
T 3nep_X           65 GPTEDSDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVA  118 (314)
T ss_dssp             GGGTTCSEEEECCCC-------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECC
T ss_pred             HHhCCCCEEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecC
Confidence            57889999999998653332333344678888899999999888755 444444

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=97.74  E-value=0.0001  Score=69.04  Aligned_cols=115  Identities=11%  Similarity=0.025  Sum_probs=73.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      +++|.|+|| |.+|..++..|+..|+ +|+++++++++++.....+...... .    .  ...++..       ..++ 
T Consensus         4 ~~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~-~----~--~~~~i~~-------t~d~-   67 (322)
T 1t2d_A            4 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVM-A----Y--SNCKVSG-------SNTY-   67 (322)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHH-H----T--CCCCEEE-------ECCG-
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhh-c----C--CCcEEEE-------CCCH-
Confidence            468999997 9999999999999998 9999999988776544444332100 0    0  0012221       1234 


Q ss_pred             HHhcCCCEEEEccccCccccCC-----CCCcchhhHHHHHHHHHHHHHcCCC-EEEEE
Q 016901          159 PALGNASVVICCIGASEKEVFD-----ITGPYRIDFQATKNLVDAATIAKVN-HFIMV  210 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~~~~~~-----~~~~~~~nv~g~~~ll~a~~~~~v~-r~V~~  210 (380)
                      ++++++|+||.++|........     .......|+.-.+.+++.+.+.... .++.+
T Consensus        68 ~al~~aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~  125 (322)
T 1t2d_A           68 DDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVV  125 (322)
T ss_dssp             GGGTTCSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEEC
T ss_pred             HHhCCCCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEe
Confidence            5688999999999854321111     1223455777777888887776544 34444

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=97.74  E-value=0.00013  Score=68.25  Aligned_cols=116  Identities=14%  Similarity=0.097  Sum_probs=71.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~--~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ++++|.|+|| |++|..++..|+..|.  +|++++.++++++.....+..          .......+.+..   .+   
T Consensus         6 ~~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~----------~~~~~~~~~i~~---~~---   68 (318)
T 1y6j_A            6 SRSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINH----------GLPFMGQMSLYA---GD---   68 (318)
T ss_dssp             -CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTT----------SCCCTTCEEEC-----C---
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHH----------hHHhcCCeEEEE---CC---
Confidence            3568999997 9999999999999986  899999987765543332221          000112333321   12   


Q ss_pred             HHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEcc
Q 016901          157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS  212 (380)
                       .++++++|+||.++|..........+....|+...+.+++.+.+.+..-+|.+.|
T Consensus        69 -~~a~~~aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t  123 (318)
T 1y6j_A           69 -YSDVKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVS  123 (318)
T ss_dssp             -GGGGTTCSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECS
T ss_pred             -HHHhCCCCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEec
Confidence             3468899999999986432211112235678888889999988876554555544

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.72  E-value=3.1e-05  Score=63.51  Aligned_cols=71  Identities=18%  Similarity=0.292  Sum_probs=54.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      +++|+|.| +|.+|+.+++.|.+.|++|++.+|++++.+.+.+.+                 . ....     ..+++.+
T Consensus        21 ~~~v~iiG-~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~-----------------~-~~~~-----~~~~~~~   76 (144)
T 3oj0_A           21 GNKILLVG-NGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKY-----------------E-YEYV-----LINDIDS   76 (144)
T ss_dssp             CCEEEEEC-CSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHH-----------------T-CEEE-----ECSCHHH
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHh-----------------C-CceE-----eecCHHH
Confidence            67999999 599999999999999999999999998877654422                 1 1111     2345677


Q ss_pred             HhcCCCEEEEccccC
Q 016901          160 ALGNASVVICCIGAS  174 (380)
Q Consensus       160 a~~~~d~Vi~~Ag~~  174 (380)
                      ++.++|+||.+.+..
T Consensus        77 ~~~~~Divi~at~~~   91 (144)
T 3oj0_A           77 LIKNNDVIITATSSK   91 (144)
T ss_dssp             HHHTCSEEEECSCCS
T ss_pred             HhcCCCEEEEeCCCC
Confidence            888999999998754

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=97.71  E-value=5.8e-05  Score=71.68  Aligned_cols=99  Identities=17%  Similarity=0.243  Sum_probs=65.2

Q ss_pred             CC--CeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh
Q 016901           79 DD--NLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (380)
Q Consensus        79 ~~--~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~  155 (380)
                      .+  ++|||+||+|.||..+++.+...|+ +|++++|++++.+.+.+.   ++               .. ...|..+.+
T Consensus       158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~---~g---------------~~-~~~d~~~~~  218 (357)
T 2zb4_A          158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSE---LG---------------FD-AAINYKKDN  218 (357)
T ss_dssp             TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT---SC---------------CS-EEEETTTSC
T ss_pred             CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH---cC---------------Cc-eEEecCchH
Confidence            45  8999999999999999999999999 999999998766554321   11               11 124665532


Q ss_pred             ---cHHHHhc-CCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCC
Q 016901          156 ---QIEPALG-NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (380)
Q Consensus       156 ---~~~~a~~-~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~  214 (380)
                         .+.+... ++|+||+|+|.                ......++.++..  +++|.++...
T Consensus       219 ~~~~~~~~~~~~~d~vi~~~G~----------------~~~~~~~~~l~~~--G~iv~~G~~~  263 (357)
T 2zb4_A          219 VAEQLRESCPAGVDVYFDNVGG----------------NISDTVISQMNEN--SHIILCGQIS  263 (357)
T ss_dssp             HHHHHHHHCTTCEEEEEESCCH----------------HHHHHHHHTEEEE--EEEEECCCGG
T ss_pred             HHHHHHHhcCCCCCEEEECCCH----------------HHHHHHHHHhccC--cEEEEECCcc
Confidence               2222222 69999999983                1123344444333  4788887654

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=97.71  E-value=0.00015  Score=68.19  Aligned_cols=114  Identities=15%  Similarity=0.062  Sum_probs=72.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +.++|.|+|| |.+|..++..|+..|+ +|++.++++++++.....+...... .    .  ...++...       .++
T Consensus        13 ~~~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~-~----~--~~~~i~~t-------~d~   77 (328)
T 2hjr_A           13 MRKKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMAL-I----G--SPAKIFGE-------NNY   77 (328)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHH-H----T--CCCCEEEE-------SCG
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhc-c----C--CCCEEEEC-------CCH
Confidence            3468999997 9999999999999998 9999999988776543333221100 0    0  00223221       224


Q ss_pred             HHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEE
Q 016901          158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFI  208 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V  208 (380)
                       ++++++|+||-++|...............|+.-.+.+++.+.+....-++
T Consensus        78 -~al~~aD~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~v  127 (328)
T 2hjr_A           78 -EYLQNSDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFV  127 (328)
T ss_dssp             -GGGTTCSEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred             -HHHCCCCEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHCCCeEE
Confidence             56889999999998543221122223455777788888888776544343

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=97.70  E-value=6.3e-05  Score=70.77  Aligned_cols=76  Identities=18%  Similarity=0.236  Sum_probs=54.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh---
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV---  155 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~---  155 (380)
                      .+++|||+||+|.||..+++.+...|++|++++|++++.+.+.+   ++               +... ..|..+.+   
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~---~~---------------g~~~-~~~~~~~~~~~  209 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVE---EL---------------GFDG-AIDYKNEDLAA  209 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH---TT---------------CCSE-EEETTTSCHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---Hc---------------CCCE-EEECCCHHHHH
Confidence            57899999999999999999999999999999999887665422   11               1111 13554433   


Q ss_pred             cHHHHh-cCCCEEEEcccc
Q 016901          156 QIEPAL-GNASVVICCIGA  173 (380)
Q Consensus       156 ~~~~a~-~~~d~Vi~~Ag~  173 (380)
                      .+.+.. +++|+||+|+|.
T Consensus       210 ~~~~~~~~~~d~vi~~~g~  228 (336)
T 4b7c_A          210 GLKRECPKGIDVFFDNVGG  228 (336)
T ss_dssp             HHHHHCTTCEEEEEESSCH
T ss_pred             HHHHhcCCCceEEEECCCc
Confidence            222222 369999999973

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.69  E-value=0.00042  Score=63.73  Aligned_cols=107  Identities=13%  Similarity=0.221  Sum_probs=75.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCc------------------hhHHHHHHHHHhhhhcccccccCCC
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV------------------QRAENLVQSVKQMKLDGELANKGIQ  139 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~  139 (380)
                      ...+|+|.| .|++|+.+++.|+..|. ++++++++.                  .|.+...+.+..++-          
T Consensus        35 ~~~~VlVvG-aGGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP----------  103 (292)
T 3h8v_A           35 RTFAVAIVG-VGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINP----------  103 (292)
T ss_dssp             GGCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCT----------
T ss_pred             hCCeEEEEC-cCHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCC----------
Confidence            557899999 79999999999999995 788888766                  566666666655431          


Q ss_pred             CCCceEEEEcCCCChhcHHHHh-----------cCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEE
Q 016901          140 PVEMLELVECDLEKRVQIEPAL-----------GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFI  208 (380)
Q Consensus       140 ~~~~v~~~~~Dl~d~~~~~~a~-----------~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V  208 (380)
                       .-+++.+..++++.+.+++.+           .++|+||.+.-               |...-..+-++|.+.++ .+|
T Consensus       104 -~v~v~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~D---------------n~~~R~~in~~c~~~~~-Pli  166 (292)
T 3h8v_A          104 -DVLFEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVD---------------NFEARMTINTACNELGQ-TWM  166 (292)
T ss_dssp             -TSEEEEECCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCS---------------SHHHHHHHHHHHHHHTC-CEE
T ss_pred             -CcEEEEecccCCcHHHHHHHhhhhcccccccCCCCCEEEECCc---------------chhhhhHHHHHHHHhCC-CEE
Confidence             135666677787656666554           68999998752               33333446677888775 466


Q ss_pred             EEccC
Q 016901          209 MVSSL  213 (380)
Q Consensus       209 ~~SS~  213 (380)
                      +.+..
T Consensus       167 ~~gv~  171 (292)
T 3h8v_A          167 ESGVS  171 (292)
T ss_dssp             EEEEC
T ss_pred             Eeeee
Confidence            65543

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=97.69  E-value=0.00013  Score=68.35  Aligned_cols=115  Identities=13%  Similarity=0.059  Sum_probs=80.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEE-EcCCCChh
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELV-ECDLEKRV  155 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~--~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~Dl~d~~  155 (380)
                      ..++|.|+|+ |.+|..++..|+..|.  +|+++++++++.+.....+......          .....+. ..|     
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~----------~~~~~i~~t~d-----   83 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLF----------LHTAKIVSGKD-----   83 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGG----------SCCSEEEEESS-----
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhc----------ccCCeEEEcCC-----
Confidence            4578999998 9999999999999996  8999999888766554444332100          0112222 223     


Q ss_pred             cHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCE-EEEEc
Q 016901          156 QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNH-FIMVS  211 (380)
Q Consensus       156 ~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r-~V~~S  211 (380)
                       +++ ++++|+||-+||.......+..+.+..|..-.+.+++.+.+.+..- ++.+|
T Consensus        84 -~~~-~~daDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvt  138 (330)
T 3ldh_A           84 -YSV-SAGSKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHP  138 (330)
T ss_dssp             -SCS-CSSCSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             -HHH-hCCCCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCC
Confidence             222 7899999999997654444555667889988999999998876554 44444

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=97.65  E-value=8.1e-05  Score=73.26  Aligned_cols=75  Identities=15%  Similarity=0.186  Sum_probs=64.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      +.|+|+|.| .|.+|++|++.|.+.|++|+++.++++..+.+.+.                  -++..+.||-++++.++
T Consensus         2 ~~M~iiI~G-~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~------------------~~~~~i~Gd~~~~~~L~   62 (461)
T 4g65_A            2 NAMKIIILG-AGQVGGTLAENLVGENNDITIVDKDGDRLRELQDK------------------YDLRVVNGHASHPDVLH   62 (461)
T ss_dssp             CCEEEEEEC-CSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHH------------------SSCEEEESCTTCHHHHH
T ss_pred             CcCEEEEEC-CCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHh------------------cCcEEEEEcCCCHHHHH
Confidence            568999999 69999999999999999999999999887766531                  25788999999999999


Q ss_pred             HH-hcCCCEEEEccc
Q 016901          159 PA-LGNASVVICCIG  172 (380)
Q Consensus       159 ~a-~~~~d~Vi~~Ag  172 (380)
                      ++ ++++|.+|-+.+
T Consensus        63 ~Agi~~ad~~ia~t~   77 (461)
T 4g65_A           63 EAGAQDADMLVAVTN   77 (461)
T ss_dssp             HHTTTTCSEEEECCS
T ss_pred             hcCCCcCCEEEEEcC
Confidence            87 588999987643

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=97.65  E-value=0.0004  Score=65.10  Aligned_cols=114  Identities=15%  Similarity=0.153  Sum_probs=75.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~--~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      +.++|.|+|| |.+|..++..|+..+.  +|+++++++++++.....+.... .         ....+.+.. |  +   
T Consensus         8 ~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~-~---------~~~~~~i~~-~--~---   70 (326)
T 2zqz_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNAL-P---------FTSPKKIYS-A--E---   70 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTG-G---------GSCCCEEEE-C--C---
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHH-H---------hcCCeEEEE-C--C---
Confidence            5579999998 9999999999998875  89999998877766544443211 0         012333332 2  1   


Q ss_pred             HHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCC-EEEEE
Q 016901          157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMV  210 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~-r~V~~  210 (380)
                       .++++++|+||.++|...............|+...+.+++.+.+.... .++.+
T Consensus        71 -~~a~~~aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~  124 (326)
T 2zqz_A           71 -YSDAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVA  124 (326)
T ss_dssp             -GGGGGGCSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEEC
T ss_pred             -HHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEe
Confidence             456889999999998653222222223556888888888888877654 44444

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.62  E-value=9.3e-05  Score=68.55  Aligned_cols=76  Identities=24%  Similarity=0.253  Sum_probs=56.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ..+++|+|+|+ |.+|+.++..|++.|+ +|++..|+.++.+++.+.+.                ....    ++.+.++
T Consensus       139 l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~----------------~~~~----~~~~~~~  197 (297)
T 2egg_A          139 LDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGD----------------ERRS----AYFSLAE  197 (297)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSC----------------SSSC----CEECHHH
T ss_pred             CCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhh----------------hccC----ceeeHHH
Confidence            35789999996 8899999999999997 99999999988777654221                1000    1112345


Q ss_pred             HHHHhcCCCEEEEccccC
Q 016901          157 IEPALGNASVVICCIGAS  174 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag~~  174 (380)
                      +.+++.++|+||++.+..
T Consensus       198 ~~~~~~~aDivIn~t~~~  215 (297)
T 2egg_A          198 AETRLAEYDIIINTTSVG  215 (297)
T ss_dssp             HHHTGGGCSEEEECSCTT
T ss_pred             HHhhhccCCEEEECCCCC
Confidence            677788999999998754

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=97.62  E-value=0.00018  Score=67.13  Aligned_cols=117  Identities=11%  Similarity=0.029  Sum_probs=71.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +.++|.|.|| |.+|..++..|++.|+ +|+++++++++.+.....+...... .    .  ...++...       .++
T Consensus         3 ~~~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~-~----~--~~~~i~~t-------~d~   67 (317)
T 2ewd_A            3 ERRKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVM-F----G--STSKVIGT-------DDY   67 (317)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHH-H----T--CCCCEEEE-------SCG
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhh-c----C--CCcEEEEC-------CCH
Confidence            4578999997 9999999999999998 9999999987766532222111000 0    0  00122211       223


Q ss_pred             HHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCC-EEEEEc
Q 016901          158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVS  211 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~-r~V~~S  211 (380)
                       ++++++|+||.++|..........+...-|....+.+++.+.+.... .++.+|
T Consensus        68 -~a~~~aDiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~s  121 (317)
T 2ewd_A           68 -ADISGSDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICIT  121 (317)
T ss_dssp             -GGGTTCSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred             -HHhCCCCEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeC
Confidence             56789999999998553322222222345666677778777765534 344444

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.61  E-value=9.2e-05  Score=69.86  Aligned_cols=98  Identities=13%  Similarity=0.109  Sum_probs=67.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh---
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV---  155 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~---  155 (380)
                      .+++|||+||+|.+|..+++.+...|++|++++|++++.+.+.+    ++             .. .+  .|..+.+   
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~----~g-------------a~-~~--~d~~~~~~~~  225 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKA----LG-------------AD-ET--VNYTHPDWPK  225 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----HT-------------CS-EE--EETTSTTHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh----cC-------------CC-EE--EcCCcccHHH
Confidence            56899999999999999999999999999999999877665432    11             11 11  3655532   


Q ss_pred             cHHHHh--cCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCC
Q 016901          156 QIEPAL--GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (380)
Q Consensus       156 ~~~~a~--~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~  214 (380)
                      .+.++.  .++|+||+++| ..               .....++.++..  .++|.+++..
T Consensus       226 ~~~~~~~~~~~d~vi~~~g-~~---------------~~~~~~~~l~~~--G~~v~~g~~~  268 (343)
T 2eih_A          226 EVRRLTGGKGADKVVDHTG-AL---------------YFEGVIKATANG--GRIAIAGASS  268 (343)
T ss_dssp             HHHHHTTTTCEEEEEESSC-SS---------------SHHHHHHHEEEE--EEEEESSCCC
T ss_pred             HHHHHhCCCCceEEEECCC-HH---------------HHHHHHHhhccC--CEEEEEecCC
Confidence            333443  26999999998 21               123345555444  3788888754

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.61  E-value=6.7e-05  Score=71.50  Aligned_cols=76  Identities=22%  Similarity=0.306  Sum_probs=57.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      .+++|+|+|+ |.+|+.+++.|...|++|++++|++++.+.+.+...                ..+..+   ..+.+++.
T Consensus       166 ~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~----------------~~~~~~---~~~~~~~~  225 (361)
T 1pjc_A          166 KPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFG----------------SRVELL---YSNSAEIE  225 (361)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG----------------GGSEEE---ECCHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhC----------------ceeEee---eCCHHHHH
Confidence            4579999998 999999999999999999999999988766543221                122222   12345677


Q ss_pred             HHhcCCCEEEEccccC
Q 016901          159 PALGNASVVICCIGAS  174 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~  174 (380)
                      +.+.++|+||++++..
T Consensus       226 ~~~~~~DvVI~~~~~~  241 (361)
T 1pjc_A          226 TAVAEADLLIGAVLVP  241 (361)
T ss_dssp             HHHHTCSEEEECCCCT
T ss_pred             HHHcCCCEEEECCCcC
Confidence            7888999999998753

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=97.61  E-value=0.00057  Score=62.97  Aligned_cols=116  Identities=13%  Similarity=0.026  Sum_probs=78.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G--~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      |+|.|+|| |+||+.++..|+.++  .++.+++.++.+.+...-.+......-         .....+...+  |.    
T Consensus         1 MKV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~---------~~~~~i~~~~--d~----   64 (294)
T 2x0j_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGI---------DKYPKIVGGA--DY----   64 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGG---------TCCCEEEEES--CG----
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccC---------CCCCeEecCC--CH----
Confidence            67999995 999999999999887  479999988876654444333211000         0122222221  12    


Q ss_pred             HHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEcc
Q 016901          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS  212 (380)
                      +.++++|+||-+||.......+..+.++.|..-.+.+.+.+.+.+.+-++.+-|
T Consensus        65 ~~~~~aDvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvs  118 (294)
T 2x0j_A           65 SLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT  118 (294)
T ss_dssp             GGGTTCSEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred             HHhCCCCEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEec
Confidence            357899999999997654444445557889999999999999888665554444

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=97.58  E-value=0.00012  Score=69.54  Aligned_cols=75  Identities=16%  Similarity=0.246  Sum_probs=54.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh---
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV---  155 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~---  155 (380)
                      .+++|||+||+|.||..+++.+...|++|++++|++++.+.+.+    ++             .. .+  .|..+.+   
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----lG-------------a~-~~--~~~~~~~~~~  226 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACER----LG-------------AK-RG--INYRSEDFAA  226 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----HT-------------CS-EE--EETTTSCHHH
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----cC-------------CC-EE--EeCCchHHHH
Confidence            56899999999999999999999999999999999887765433    21             11 11  2444432   


Q ss_pred             cHHHHh-cCCCEEEEcccc
Q 016901          156 QIEPAL-GNASVVICCIGA  173 (380)
Q Consensus       156 ~~~~a~-~~~d~Vi~~Ag~  173 (380)
                      .+.++. .++|+||+|+|.
T Consensus       227 ~~~~~~~~g~Dvvid~~g~  245 (353)
T 4dup_A          227 VIKAETGQGVDIILDMIGA  245 (353)
T ss_dssp             HHHHHHSSCEEEEEESCCG
T ss_pred             HHHHHhCCCceEEEECCCH
Confidence            222222 369999999984

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=97.57  E-value=0.0013  Score=61.00  Aligned_cols=115  Identities=16%  Similarity=0.096  Sum_probs=74.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G--~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      |+|.|.| +|.+|..++..|+++|  ++|++++|++++.+.+...+......     .    ...+.+...|      + 
T Consensus         2 ~kI~VIG-aG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~-----~----~~~~~~~~~d------~-   64 (309)
T 1hyh_A            2 RKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMAN-----L----EAHGNIVIND------W-   64 (309)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGG-----S----SSCCEEEESC------G-
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhh-----c----CCCeEEEeCC------H-
Confidence            6899999 8999999999999999  79999999988776665433211000     0    0123332222      3 


Q ss_pred             HHhcCCCEEEEccccCcc----ccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEcc
Q 016901          159 PALGNASVVICCIGASEK----EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~~----~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS  212 (380)
                      ++++++|+||.+++....    ...........|+.-...+++.+.+...+.+|.+.|
T Consensus        65 ~~~~~aDvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii~~t  122 (309)
T 1hyh_A           65 AALADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVIS  122 (309)
T ss_dssp             GGGTTCSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             HHhCCCCEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEc
Confidence            457899999999876432    212233446678877888888887765443443333

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.57  E-value=0.00017  Score=65.91  Aligned_cols=74  Identities=15%  Similarity=0.219  Sum_probs=54.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      .+++++|+|+ |.+|+.++..|++.|++|++..|+.++.+++.+.+...              ..+..  .|+   +++.
T Consensus       118 ~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~--------------~~~~~--~~~---~~~~  177 (272)
T 1p77_A          118 PNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPY--------------GNIQA--VSM---DSIP  177 (272)
T ss_dssp             TTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGG--------------SCEEE--EEG---GGCC
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcccc--------------CCeEE--eeH---HHhc
Confidence            5789999997 88999999999999999999999998888776544321              12222  232   2221


Q ss_pred             HHhcCCCEEEEccccC
Q 016901          159 PALGNASVVICCIGAS  174 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~  174 (380)
                      +  +++|+||++++..
T Consensus       178 ~--~~~DivIn~t~~~  191 (272)
T 1p77_A          178 L--QTYDLVINATSAG  191 (272)
T ss_dssp             C--SCCSEEEECCCC-
T ss_pred             c--CCCCEEEECCCCC
Confidence            1  4899999999854

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=97.54  E-value=0.0002  Score=63.01  Aligned_cols=66  Identities=20%  Similarity=0.323  Sum_probs=50.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      .+|+|.|.| +|.+|..+++.|++.|++|++++|++++.+.+.+                   .++...        ++.
T Consensus        27 ~~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~-------------------~g~~~~--------~~~   78 (215)
T 2vns_A           27 EAPKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRTARLFP-------------------SAAQVT--------FQE   78 (215)
T ss_dssp             --CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSB-------------------TTSEEE--------EHH
T ss_pred             CCCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-------------------cCCcee--------cHH
Confidence            346899999 9999999999999999999999999876654321                   123321        456


Q ss_pred             HHhcCCCEEEEccc
Q 016901          159 PALGNASVVICCIG  172 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag  172 (380)
                      +++.++|+||.+..
T Consensus        79 ~~~~~~DvVi~av~   92 (215)
T 2vns_A           79 EAVSSPEVIFVAVF   92 (215)
T ss_dssp             HHTTSCSEEEECSC
T ss_pred             HHHhCCCEEEECCC
Confidence            77889999999875

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.52  E-value=0.00015  Score=67.11  Aligned_cols=74  Identities=18%  Similarity=0.242  Sum_probs=54.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      .+++|+|+||+|.+|..+++.+...|++|+++++++++.+...+    ++               ... ..|..+.+++.
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~g---------------a~~-~~~~~~~~~~~  184 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLA----LG---------------AEE-AATYAEVPERA  184 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH----TT---------------CSE-EEEGGGHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh----cC---------------CCE-EEECCcchhHH
Confidence            56899999999999999999999999999999999887665432    11               111 13444313344


Q ss_pred             HHhcCCCEEEEcccc
Q 016901          159 PALGNASVVICCIGA  173 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~  173 (380)
                      +.++++|+||+ +|.
T Consensus       185 ~~~~~~d~vid-~g~  198 (302)
T 1iz0_A          185 KAWGGLDLVLE-VRG  198 (302)
T ss_dssp             HHTTSEEEEEE-CSC
T ss_pred             HHhcCceEEEE-CCH
Confidence            55588999999 874

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=97.52  E-value=0.0002  Score=67.58  Aligned_cols=75  Identities=15%  Similarity=0.086  Sum_probs=54.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh--
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV--  155 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~-G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~--  155 (380)
                      .+++|||+||+|.||..+++.+... |++|+++++++++.+...+    ++             ...   ..|..+.+  
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~----~g-------------~~~---~~~~~~~~~~  229 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR----AG-------------ADY---VINASMQDPL  229 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH----HT-------------CSE---EEETTTSCHH
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----hC-------------CCE---EecCCCccHH
Confidence            5689999999999999999999998 9999999999877655432    21             111   12444433  


Q ss_pred             -cHHHHh--cCCCEEEEcccc
Q 016901          156 -QIEPAL--GNASVVICCIGA  173 (380)
Q Consensus       156 -~~~~a~--~~~d~Vi~~Ag~  173 (380)
                       .+.++.  +++|+||+|+|.
T Consensus       230 ~~~~~~~~~~~~d~vi~~~g~  250 (347)
T 1jvb_A          230 AEIRRITESKGVDAVIDLNNS  250 (347)
T ss_dssp             HHHHHHTTTSCEEEEEESCCC
T ss_pred             HHHHHHhcCCCceEEEECCCC
Confidence             244444  479999999984

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=97.51  E-value=0.00072  Score=60.90  Aligned_cols=107  Identities=18%  Similarity=0.249  Sum_probs=71.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCc-------------------hhHHHHHHHHHhhhhcccccccCC
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKGI  138 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~  138 (380)
                      ...+|+|.|+ |++|+++++.|+..|. ++++++++.                   .+.+.+.+.+..++-         
T Consensus        27 ~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np---------   96 (251)
T 1zud_1           27 LDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNP---------   96 (251)
T ss_dssp             HTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCT---------
T ss_pred             hcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCC---------
Confidence            4578999994 7799999999999996 677775543                   566666666655431         


Q ss_pred             CCCCceEEEEcCCCChhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCC
Q 016901          139 QPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (380)
Q Consensus       139 ~~~~~v~~~~~Dl~d~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~  214 (380)
                        .-+++.+..+++ .+.+.+.+.++|+||++..               |...-..+-++|.+.++ .+|+.+..+
T Consensus        97 --~~~v~~~~~~~~-~~~~~~~~~~~DvVi~~~d---------------~~~~r~~l~~~~~~~~~-p~i~~~~~g  153 (251)
T 1zud_1           97 --DIQLTALQQRLT-GEALKDAVARADVVLDCTD---------------NMATRQEINAACVALNT-PLITASAVG  153 (251)
T ss_dssp             --TSEEEEECSCCC-HHHHHHHHHHCSEEEECCS---------------SHHHHHHHHHHHHHTTC-CEEEEEEEB
T ss_pred             --CCEEEEEeccCC-HHHHHHHHhcCCEEEECCC---------------CHHHHHHHHHHHHHhCC-CEEEEeccc
Confidence              123455555554 3567788889999999853               22333455667777775 467666543

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.48  E-value=0.00026  Score=66.40  Aligned_cols=98  Identities=13%  Similarity=0.072  Sum_probs=65.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCCh---h
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR---V  155 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~---~  155 (380)
                      .+++|||+||+|.||..+++.+...|++|+++++++++.+...+    ++             .. .+  .|..+.   +
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~g-------------a~-~~--~~~~~~~~~~  207 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKE----YG-------------AE-YL--INASKEDILR  207 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TT-------------CS-EE--EETTTSCHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cC-------------Cc-EE--EeCCCchHHH
Confidence            56899999999999999999999999999999998877664432    21             11 12  244332   2


Q ss_pred             cHHHHh--cCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCC
Q 016901          156 QIEPAL--GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (380)
Q Consensus       156 ~~~~a~--~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~  214 (380)
                      .+.+..  .++|+||+|+|..                .....++.++..  +++|.++...
T Consensus       208 ~~~~~~~~~g~D~vid~~g~~----------------~~~~~~~~l~~~--G~iv~~G~~~  250 (334)
T 3qwb_A          208 QVLKFTNGKGVDASFDSVGKD----------------TFEISLAALKRK--GVFVSFGNAS  250 (334)
T ss_dssp             HHHHHTTTSCEEEEEECCGGG----------------GHHHHHHHEEEE--EEEEECCCTT
T ss_pred             HHHHHhCCCCceEEEECCChH----------------HHHHHHHHhccC--CEEEEEcCCC
Confidence            333333  3699999999841                123344444433  4788877643

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.48  E-value=0.00021  Score=66.84  Aligned_cols=75  Identities=20%  Similarity=0.233  Sum_probs=54.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCCh---h
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR---V  155 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~---~  155 (380)
                      .+++|||+||+|.||..+++.+...|++|+++++++++.+...+    ++             .. .+  .|..+.   +
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~G-------------a~-~~--~~~~~~~~~~  199 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKA----LG-------------AW-ET--IDYSHEDVAK  199 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH----HT-------------CS-EE--EETTTSCHHH
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cC-------------CC-EE--EeCCCccHHH
Confidence            57899999999999999999999899999999999887665432    21             11 12  244433   2


Q ss_pred             cHHHHhc--CCCEEEEcccc
Q 016901          156 QIEPALG--NASVVICCIGA  173 (380)
Q Consensus       156 ~~~~a~~--~~d~Vi~~Ag~  173 (380)
                      .+.+...  ++|+||+|+|.
T Consensus       200 ~~~~~~~~~g~Dvvid~~g~  219 (325)
T 3jyn_A          200 RVLELTDGKKCPVVYDGVGQ  219 (325)
T ss_dssp             HHHHHTTTCCEEEEEESSCG
T ss_pred             HHHHHhCCCCceEEEECCCh
Confidence            3333333  69999999984

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=97.48  E-value=0.0002  Score=66.70  Aligned_cols=114  Identities=16%  Similarity=0.033  Sum_probs=70.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHC--CCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKL--GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~--G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      |+|.|+|+ |.+|..++..|++.  |++|+++++++++.+.+...+.... ...    .    ....+..     ..+++
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~-~~~----~----~~~~i~~-----t~d~~   65 (310)
T 1guz_A            1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESG-PVG----L----FDTKVTG-----SNDYA   65 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTH-HHH----T----CCCEEEE-----ESCGG
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhh-hcc----c----CCcEEEE-----CCCHH
Confidence            47999997 99999999999985  7999999999887765443222110 000    0    1111111     01233


Q ss_pred             HHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCC-EEEEE
Q 016901          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMV  210 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~-r~V~~  210 (380)
                      + ++++|+||.+++............+..|+.-...+++.+.+.... .++.+
T Consensus        66 ~-l~~aDvViiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~  117 (310)
T 1guz_A           66 D-TANSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVV  117 (310)
T ss_dssp             G-GTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEEC
T ss_pred             H-HCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEE
Confidence            3 789999999997532211111122446777778888888776644 44444

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.47  E-value=0.00037  Score=65.66  Aligned_cols=76  Identities=21%  Similarity=0.283  Sum_probs=53.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCC-hhcH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK-RVQI  157 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d-~~~~  157 (380)
                      .+++|||+||+|.||..+++.+...|++|+++++++++.+...+    ++             . -.++..+ .+ .+.+
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~g-------------a-~~v~~~~-~~~~~~v  219 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKS----VG-------------A-DIVLPLE-EGWAKAV  219 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----HT-------------C-SEEEESS-TTHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----cC-------------C-cEEecCc-hhHHHHH
Confidence            57899999999999999999999999999999999887755433    21             1 1222223 22 1333


Q ss_pred             HHHhc--CCCEEEEcccc
Q 016901          158 EPALG--NASVVICCIGA  173 (380)
Q Consensus       158 ~~a~~--~~d~Vi~~Ag~  173 (380)
                      .++..  ++|+||+|+|.
T Consensus       220 ~~~~~~~g~Dvvid~~g~  237 (342)
T 4eye_A          220 REATGGAGVDMVVDPIGG  237 (342)
T ss_dssp             HHHTTTSCEEEEEESCC-
T ss_pred             HHHhCCCCceEEEECCch
Confidence            44443  59999999984

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=97.44  E-value=0.0012  Score=61.48  Aligned_cols=112  Identities=16%  Similarity=0.065  Sum_probs=74.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G--~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      |+|.|+|| |.+|..++..|+..+  .+|+++++++++++.....+....          .....+.+.. |  +    .
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~----------~~~~~~~v~~-~--~----~   62 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHAT----------PFAHPVWVWA-G--S----Y   62 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTG----------GGSCCCEEEE-C--C----G
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhH----------hhcCCeEEEE-C--C----H
Confidence            57999997 999999999999987  689999999877765444433211          0002333332 2  2    4


Q ss_pred             HHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCC-EEEEE
Q 016901          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMV  210 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~-r~V~~  210 (380)
                      ++++++|+||.++|...............|..-.+.+++.+.+.+.. .++.+
T Consensus        63 ~a~~~aD~Vii~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~  115 (310)
T 2xxj_A           63 GDLEGARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVA  115 (310)
T ss_dssp             GGGTTEEEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred             HHhCCCCEEEECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEe
Confidence            46889999999998653322222223566788888888888887655 44444

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*

Probab=97.42  E-value=0.0016  Score=60.65  Aligned_cols=117  Identities=15%  Similarity=0.112  Sum_probs=69.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~--~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ++|+|.|.|| |.+|..++..|+..|+  +|++++|++++.+.....+.. ++.         ......+...  ++   
T Consensus         6 ~~mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~-~~~---------~~~~~~v~~~--~~---   69 (319)
T 1lld_A            6 KPTKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQH-GSS---------FYPTVSIDGS--DD---   69 (319)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHH-TGG---------GSTTCEEEEE--SC---
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHh-hhh---------hcCCeEEEeC--CC---
Confidence            4578999997 9999999999999998  999999997665422111111 000         0012222221  12   


Q ss_pred             HHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEcc
Q 016901          157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS  212 (380)
                       .++++++|+||.+++.......+.......|......+++.+.+.+.+.+|.+.+
T Consensus        70 -~~~~~~aD~Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~vi~~~  124 (319)
T 1lld_A           70 -PEICRDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLIT  124 (319)
T ss_dssp             -GGGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred             -HHHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEec
Confidence             1356789999999975432211112224456666777777776655444444444

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.42  E-value=0.00029  Score=67.00  Aligned_cols=98  Identities=15%  Similarity=0.167  Sum_probs=65.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh---
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV---  155 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~---  155 (380)
                      .+++|||+||+|.||..+++.+...|++|+++++++++.+.+.+    ++             .. .+  .|..+.+   
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~----~G-------------a~-~~--~~~~~~~~~~  222 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS----LG-------------CD-RP--INYKTEPVGT  222 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TT-------------CS-EE--EETTTSCHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH----cC-------------Cc-EE--EecCChhHHH
Confidence            56899999999999999999999999999999999877655432    21             11 12  2333321   


Q ss_pred             cHHHHh-cCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCC
Q 016901          156 QIEPAL-GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (380)
Q Consensus       156 ~~~~a~-~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~  214 (380)
                      .+.+.. .++|+||+|+|..                .....++.++..  +++|.+++..
T Consensus       223 ~~~~~~~~g~D~vid~~g~~----------------~~~~~~~~l~~~--G~iv~~g~~~  264 (362)
T 2c0c_A          223 VLKQEYPEGVDVVYESVGGA----------------MFDLAVDALATK--GRLIVIGFIS  264 (362)
T ss_dssp             HHHHHCTTCEEEEEECSCTH----------------HHHHHHHHEEEE--EEEEECCCGG
T ss_pred             HHHHhcCCCCCEEEECCCHH----------------HHHHHHHHHhcC--CEEEEEeCCC
Confidence            222222 3699999998731                233445555444  4799888754

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=97.41  E-value=0.00013  Score=69.14  Aligned_cols=99  Identities=19%  Similarity=0.156  Sum_probs=59.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC-----C-eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEE-EEcCC
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLG-----F-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLEL-VECDL  151 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G-----~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~Dl  151 (380)
                      ++++|+|.||||++|+.+++.|++++     + +|+++.+..+.-..+..             ..    +.+.- ...++
T Consensus         8 ~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~-------------~~----~~l~~~~~~~~   70 (352)
T 2nqt_A            8 NATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGE-------------HH----PHLTPLAHRVV   70 (352)
T ss_dssp             SCEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGG-------------TC----TTCGGGTTCBC
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhh-------------hc----ccccccceeee
Confidence            45789999999999999999999987     4 77777643221000000             00    01000 00111


Q ss_pred             CChhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCC
Q 016901          152 EKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (380)
Q Consensus       152 ~d~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~  214 (380)
                      .+.+  .+.+.++|+||.|+|...                +..++..+ +.|+ ++|-+|+..
T Consensus        71 ~~~~--~~~~~~~DvVf~alg~~~----------------s~~~~~~~-~~G~-~vIDlSa~~  113 (352)
T 2nqt_A           71 EPTE--AAVLGGHDAVFLALPHGH----------------SAVLAQQL-SPET-LIIDCGADF  113 (352)
T ss_dssp             EECC--HHHHTTCSEEEECCTTSC----------------CHHHHHHS-CTTS-EEEECSSTT
T ss_pred             ccCC--HHHhcCCCEEEECCCCcc----------------hHHHHHHH-hCCC-EEEEECCCc
Confidence            1111  234568999999987542                34566777 7775 688888864

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.41  E-value=0.00028  Score=66.63  Aligned_cols=98  Identities=16%  Similarity=0.115  Sum_probs=64.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh--
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV--  155 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~--  155 (380)
                      .+.+|||+|| |.+|..+++.+...|+ +|++++|++++.+.+.+    ++               ... ..|..+.+  
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~----~G---------------a~~-~~~~~~~~~~  225 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKK----VG---------------ADY-VINPFEEDVV  225 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHH----HT---------------CSE-EECTTTSCHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----hC---------------CCE-EECCCCcCHH
Confidence            5678999999 9999999999989998 99999999877654432    21               111 12444322  


Q ss_pred             -cHHHHhc--CCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCC
Q 016901          156 -QIEPALG--NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (380)
Q Consensus       156 -~~~~a~~--~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~  214 (380)
                       .+.++..  ++|+||+++|..               ......++.++..  .++|.+++..
T Consensus       226 ~~v~~~~~g~g~D~vid~~g~~---------------~~~~~~~~~l~~~--G~iv~~g~~~  270 (348)
T 2d8a_A          226 KEVMDITDGNGVDVFLEFSGAP---------------KALEQGLQAVTPA--GRVSLLGLYP  270 (348)
T ss_dssp             HHHHHHTTTSCEEEEEECSCCH---------------HHHHHHHHHEEEE--EEEEECCCCS
T ss_pred             HHHHHHcCCCCCCEEEECCCCH---------------HHHHHHHHHHhcC--CEEEEEccCC
Confidence             2333332  699999998741               1233444554443  4788887643

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=97.40  E-value=0.00024  Score=67.46  Aligned_cols=99  Identities=16%  Similarity=0.241  Sum_probs=61.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      ++++|.|.||+|++|+.+++.|.+++ .+|+++.+..+....+......+  .           ..+   ..|+.-.+  
T Consensus        15 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~~~--~-----------~~v---~~dl~~~~--   76 (359)
T 1xyg_A           15 KDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHL--R-----------AQK---LPTLVSVK--   76 (359)
T ss_dssp             CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCGGG--T-----------TSC---CCCCBCGG--
T ss_pred             cCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCchh--c-----------Ccc---cccceecc--
Confidence            44689999999999999999999886 48888876543221111110000  0           111   13433222  


Q ss_pred             HHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccC
Q 016901          158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL  213 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~  213 (380)
                      ++.++++|+||.|++...                +...+..+ +.|+ ++|-.|+.
T Consensus        77 ~~~~~~vDvVf~atp~~~----------------s~~~a~~~-~aG~-~VId~sa~  114 (359)
T 1xyg_A           77 DADFSTVDAVFCCLPHGT----------------TQEIIKEL-PTAL-KIVDLSAD  114 (359)
T ss_dssp             GCCGGGCSEEEECCCTTT----------------HHHHHHTS-CTTC-EEEECSST
T ss_pred             hhHhcCCCEEEEcCCchh----------------HHHHHHHH-hCCC-EEEECCcc
Confidence            345578999999987532                34455666 6776 57777774

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=97.39  E-value=0.00025  Score=67.58  Aligned_cols=71  Identities=17%  Similarity=0.221  Sum_probs=50.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCc---hhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCC--h
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV---QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK--R  154 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d--~  154 (380)
                      +++|||+|| |.||..+++.+...|++|+++++++   ++.+...+    +               +...+  | .+  .
T Consensus       181 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~----~---------------ga~~v--~-~~~~~  237 (366)
T 2cdc_A          181 CRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEE----T---------------KTNYY--N-SSNGY  237 (366)
T ss_dssp             TCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHH----H---------------TCEEE--E-CTTCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHH----h---------------CCcee--c-hHHHH
Confidence            789999999 9999999999988999999999987   66543321    2               23333  4 43  1


Q ss_pred             hcHHHHhcCCCEEEEcccc
Q 016901          155 VQIEPALGNASVVICCIGA  173 (380)
Q Consensus       155 ~~~~~a~~~~d~Vi~~Ag~  173 (380)
                      +.+.+.-.++|+||+++|.
T Consensus       238 ~~~~~~~~~~d~vid~~g~  256 (366)
T 2cdc_A          238 DKLKDSVGKFDVIIDATGA  256 (366)
T ss_dssp             HHHHHHHCCEEEEEECCCC
T ss_pred             HHHHHhCCCCCEEEECCCC
Confidence            2222211579999999984

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=97.39  E-value=0.00013  Score=73.03  Aligned_cols=44  Identities=25%  Similarity=0.280  Sum_probs=35.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQ  122 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~  122 (380)
                      ..+++++|||| |++|++++..|++.|++|+++.|+.++.+++.+
T Consensus       362 l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~  405 (523)
T 2o7s_A          362 LASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAE  405 (523)
T ss_dssp             ----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHH
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence            35678999998 799999999999999999999999888776654

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=97.39  E-value=0.00072  Score=63.17  Aligned_cols=112  Identities=20%  Similarity=0.135  Sum_probs=71.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~--~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      |+|.|.|+ |.+|..++..|++.|+  +|+++++++++.+.+...+.... . .        .....+..   +|.    
T Consensus         1 mkI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~-~-~--------~~~~~i~~---~d~----   62 (319)
T 1a5z_A            1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGT-P-F--------TRRANIYA---GDY----   62 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHG-G-G--------SCCCEEEE---CCG----
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhh-h-h--------cCCcEEEe---CCH----
Confidence            47999997 9999999999999998  99999999877766543332210 0 0        01222222   222    


Q ss_pred             HHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCC-EEEEE
Q 016901          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMV  210 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~-r~V~~  210 (380)
                      ++++++|+||.+++...............|....+.+++.+.+.... .+|.+
T Consensus        63 ~~~~~aDvViiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~  115 (319)
T 1a5z_A           63 ADLKGSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVV  115 (319)
T ss_dssp             GGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred             HHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEe
Confidence            35689999999998543221111122445667777888888766544 34443

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=97.38  E-value=0.00035  Score=64.64  Aligned_cols=42  Identities=24%  Similarity=0.128  Sum_probs=36.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQ  122 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~  122 (380)
                      +|+|.|.| .|.+|..++..|++.|++|++++|++++.+.+.+
T Consensus         3 ~m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~   44 (316)
T 2ew2_A            3 AMKIAIAG-AGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRK   44 (316)
T ss_dssp             -CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CCeEEEEC-cCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHh
Confidence            46899999 5999999999999999999999999887766543

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=97.35  E-value=0.0002  Score=65.45  Aligned_cols=34  Identities=26%  Similarity=0.498  Sum_probs=28.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEeC
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKL-GFRVRAGVR  112 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~-G~~V~~l~R  112 (380)
                      ++++|.|+|++|.+|+.+++.+++. |++|+++.+
T Consensus         4 ~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d   38 (273)
T 1dih_A            4 ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALE   38 (273)
T ss_dssp             CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEEC
T ss_pred             CCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEe
Confidence            4478999999999999999998854 788875544

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.35  E-value=0.00036  Score=65.67  Aligned_cols=76  Identities=18%  Similarity=0.238  Sum_probs=54.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh--
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV--  155 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~--  155 (380)
                      ..+++|||+||+|.||..+++.+...|++|+++++++++.+.+.+    ++             ... +  .|..+.+  
T Consensus       143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----lg-------------a~~-~--~~~~~~~~~  202 (340)
T 3gms_A          143 QRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR----LG-------------AAY-V--IDTSTAPLY  202 (340)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH----HT-------------CSE-E--EETTTSCHH
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----CC-------------CcE-E--EeCCcccHH
Confidence            357899999999999999999888899999999999887765543    21             111 1  2444332  


Q ss_pred             -cHHHHh--cCCCEEEEcccc
Q 016901          156 -QIEPAL--GNASVVICCIGA  173 (380)
Q Consensus       156 -~~~~a~--~~~d~Vi~~Ag~  173 (380)
                       .+.+..  .++|+||+|+|.
T Consensus       203 ~~~~~~~~~~g~Dvvid~~g~  223 (340)
T 3gms_A          203 ETVMELTNGIGADAAIDSIGG  223 (340)
T ss_dssp             HHHHHHTTTSCEEEEEESSCH
T ss_pred             HHHHHHhCCCCCcEEEECCCC
Confidence             233333  269999999984

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=97.34  E-value=0.00055  Score=62.77  Aligned_cols=91  Identities=18%  Similarity=0.115  Sum_probs=56.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhccccccc-CCCCCCceEEEEcCCCChhcH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANK-GIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +.++|.|.| +|.+|..++..|++.|++|++.+|++++.+...+.+....-.... .. +... ....-....+.-..++
T Consensus         3 ~~~kV~VIG-aG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~-~g~~~~~-~~~~~~~~~i~~~~~~   79 (283)
T 4e12_A            3 GITNVTVLG-TGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEK-EVAGAAD-GAAQKALGGIRYSDDL   79 (283)
T ss_dssp             SCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHH-HSTTCTT-THHHHHHHHCEEESCH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHH-hcccCCH-HHHHHHHcCeEEeCCH
Confidence            457899998 699999999999999999999999998877766554321100000 00 0000 0000000001112456


Q ss_pred             HHHhcCCCEEEEccc
Q 016901          158 EPALGNASVVICCIG  172 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag  172 (380)
                      .++++++|.||.+..
T Consensus        80 ~~~~~~aDlVi~av~   94 (283)
T 4e12_A           80 AQAVKDADLVIEAVP   94 (283)
T ss_dssp             HHHTTTCSEEEECCC
T ss_pred             HHHhccCCEEEEecc
Confidence            678889999999875

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=97.34  E-value=0.00037  Score=65.69  Aligned_cols=94  Identities=20%  Similarity=0.186  Sum_probs=57.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC---eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGF---RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~---~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      +++|+|.||||.+|+.+++.|+++++   +++++....+.-..       +.+            .+..+...|+ |++ 
T Consensus         6 ~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~-------~~~------------~g~~i~~~~~-~~~-   64 (340)
T 2hjs_A            6 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQR-------MGF------------AESSLRVGDV-DSF-   64 (340)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCE-------EEE------------TTEEEECEEG-GGC-
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCc-------ccc------------CCcceEEecC-CHH-
Confidence            46899999999999999999997764   55665532110000       000            1111111122 122 


Q ss_pred             HHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCC
Q 016901          157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~  214 (380)
                         .+.++|+||.|.|..                .+..++..+.+.|++ +|.+|+..
T Consensus        65 ---~~~~~DvV~~a~g~~----------------~s~~~a~~~~~aG~k-vId~Sa~~  102 (340)
T 2hjs_A           65 ---DFSSVGLAFFAAAAE----------------VSRAHAERARAAGCS-VIDLSGAL  102 (340)
T ss_dssp             ---CGGGCSEEEECSCHH----------------HHHHHHHHHHHTTCE-EEETTCTT
T ss_pred             ---HhcCCCEEEEcCCcH----------------HHHHHHHHHHHCCCE-EEEeCCCC
Confidence               256899999998742                255677777888874 77777754

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=97.34  E-value=0.00012  Score=61.21  Aligned_cols=71  Identities=15%  Similarity=0.233  Sum_probs=50.5

Q ss_pred             CChHHHHHHHHHHHCCCeEEEEeCCchhHH---HHHHHHHhhhhcccccccCCCCCCceEEEEcCCCCh--hcHHHHh--
Q 016901           89 TGKVGSRTVRELLKLGFRVRAGVRSVQRAE---NLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR--VQIEPAL--  161 (380)
Q Consensus        89 tG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~--~~~~~a~--  161 (380)
                      +|.++...++.|++.|++|++..|+.....   ...+.++..+             .++..+++|++++  +++++++  
T Consensus        25 s~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G-------------~~~~~i~~Dv~~~~~~~v~~~~~~   91 (157)
T 3gxh_A           25 SGLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAG-------------MDYVYIPVDWQNPKVEDVEAFFAA   91 (157)
T ss_dssp             EBCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTT-------------CEEEECCCCTTSCCHHHHHHHHHH
T ss_pred             cCCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcC-------------CeEEEecCCCCCCCHHHHHHHHHH
Confidence            356789999999999999998888654321   1222333222             4577788999998  7777665  


Q ss_pred             -----cCCCEEEEcccc
Q 016901          162 -----GNASVVICCIGA  173 (380)
Q Consensus       162 -----~~~d~Vi~~Ag~  173 (380)
                           ++ |++|||||.
T Consensus        92 i~~~~G~-dVLVnnAgg  107 (157)
T 3gxh_A           92 MDQHKGK-DVLVHCLAN  107 (157)
T ss_dssp             HHHTTTS-CEEEECSBS
T ss_pred             HHhcCCC-CEEEECCCC
Confidence                 35 999999985

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=97.33  E-value=0.00055  Score=66.85  Aligned_cols=40  Identities=20%  Similarity=0.087  Sum_probs=36.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLV  121 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~  121 (380)
                      |+|.|.| +|++|..++..|++.|++|++++|++++.+.+.
T Consensus         1 mkI~VIG-~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~   40 (436)
T 1mv8_A            1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVSSTKIDLIN   40 (436)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHh
Confidence            4799998 899999999999999999999999998877654

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.32  E-value=0.00073  Score=61.59  Aligned_cols=73  Identities=18%  Similarity=0.245  Sum_probs=53.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ..+++++|+|+ |++|+.++..|++.|. +|++..|+.++.+++.+.+..               ..+..+  ++.+   
T Consensus       118 l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~---------------~~~~~~--~~~~---  176 (272)
T 3pwz_A          118 LRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH---------------SRLRIS--RYEA---  176 (272)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC---------------TTEEEE--CSGG---
T ss_pred             ccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc---------------CCeeEe--eHHH---
Confidence            36789999996 8999999999999995 999999999988887664421               123332  2222   


Q ss_pred             HHHHhcCCCEEEEcccc
Q 016901          157 IEPALGNASVVICCIGA  173 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag~  173 (380)
                      +..  .++|.|||+...
T Consensus       177 l~~--~~~DivInaTp~  191 (272)
T 3pwz_A          177 LEG--QSFDIVVNATSA  191 (272)
T ss_dssp             GTT--CCCSEEEECSSG
T ss_pred             hcc--cCCCEEEECCCC
Confidence            222  679999998754

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.32  E-value=0.001  Score=60.92  Aligned_cols=74  Identities=20%  Similarity=0.240  Sum_probs=54.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ..+++++|+|+ |.+|+.++..|++.|. +|++..|+.++.+++.+.+...              ..+..+  ++.+   
T Consensus       124 l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~--------------~~~~~~--~~~~---  183 (281)
T 3o8q_A          124 LKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAY--------------GEVKAQ--AFEQ---  183 (281)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGG--------------SCEEEE--EGGG---
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhcc--------------CCeeEe--eHHH---
Confidence            36789999996 8999999999999995 9999999999888877655421              123333  2211   


Q ss_pred             HHHHhcCCCEEEEccccC
Q 016901          157 IEPALGNASVVICCIGAS  174 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag~~  174 (380)
                         +..++|+||++.+..
T Consensus       184 ---l~~~aDiIInaTp~g  198 (281)
T 3o8q_A          184 ---LKQSYDVIINSTSAS  198 (281)
T ss_dssp             ---CCSCEEEEEECSCCC
T ss_pred             ---hcCCCCEEEEcCcCC
Confidence               126789999987543

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.31  E-value=0.00051  Score=65.38  Aligned_cols=99  Identities=16%  Similarity=0.143  Sum_probs=68.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      .+.+|||+|+ |.||..+++.+...|++|+++++++++.+...+   ++               +... ..|..+.+.+.
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~---~l---------------Ga~~-v~~~~~~~~~~  246 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALK---NF---------------GADS-FLVSRDQEQMQ  246 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHH---TS---------------CCSE-EEETTCHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---hc---------------CCce-EEeccCHHHHH
Confidence            5679999996 999999999999999999999999887655431   11               1111 23556666677


Q ss_pred             HHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCC
Q 016901          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~  214 (380)
                      ++.+++|+||+++|....               ....++.++..  .++|.+++..
T Consensus       247 ~~~~~~D~vid~~g~~~~---------------~~~~~~~l~~~--G~iv~~g~~~  285 (366)
T 1yqd_A          247 AAAGTLDGIIDTVSAVHP---------------LLPLFGLLKSH--GKLILVGAPE  285 (366)
T ss_dssp             HTTTCEEEEEECCSSCCC---------------SHHHHHHEEEE--EEEEECCCCS
T ss_pred             HhhCCCCEEEECCCcHHH---------------HHHHHHHHhcC--CEEEEEccCC
Confidence            667789999999985311               12344444433  4788887643

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=97.31  E-value=0.00032  Score=66.31  Aligned_cols=98  Identities=13%  Similarity=0.080  Sum_probs=59.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      ++++|.|.||||++|+.+++.|.+++ .+++++.+..+....+.+....  +            .+.  ....+.+.+  
T Consensus         3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~~--~------------~g~--~~~~~~~~~--   64 (345)
T 2ozp_A            3 GKKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHPN--L------------RGR--TNLKFVPPE--   64 (345)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCGG--G------------TTT--CCCBCBCGG--
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCch--h------------cCc--ccccccchh--
Confidence            35789999999999999999999876 4888877643321111000000  0            000  011122222  


Q ss_pred             HHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccC
Q 016901          158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL  213 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~  213 (380)
                       + +.++|+||.|+|..                .+..++..+.+.|+ ++|-+|+.
T Consensus        65 -~-~~~vDvV~~a~g~~----------------~s~~~a~~~~~aG~-~VId~Sa~  101 (345)
T 2ozp_A           65 -K-LEPADILVLALPHG----------------VFAREFDRYSALAP-VLVDLSAD  101 (345)
T ss_dssp             -G-CCCCSEEEECCCTT----------------HHHHTHHHHHTTCS-EEEECSST
T ss_pred             -H-hcCCCEEEEcCCcH----------------HHHHHHHHHHHCCC-EEEEcCcc
Confidence             2 57899999998753                24556667777786 57777874

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.30  E-value=0.00027  Score=67.71  Aligned_cols=77  Identities=18%  Similarity=0.182  Sum_probs=58.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      ..+++|+|+|+ |.||..+++.+...|++|++.+|++++.+.+.+.+   +             ..+.   .+..+.+++
T Consensus       166 l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~---g-------------~~~~---~~~~~~~~l  225 (377)
T 2vhw_A          166 VEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF---C-------------GRIH---TRYSSAYEL  225 (377)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---T-------------TSSE---EEECCHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhc---C-------------CeeE---eccCCHHHH
Confidence            36789999997 99999999999999999999999988765543211   1             1121   233345667


Q ss_pred             HHHhcCCCEEEEccccC
Q 016901          158 EPALGNASVVICCIGAS  174 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag~~  174 (380)
                      .+++.++|+||++++..
T Consensus       226 ~~~l~~aDvVi~~~~~p  242 (377)
T 2vhw_A          226 EGAVKRADLVIGAVLVP  242 (377)
T ss_dssp             HHHHHHCSEEEECCCCT
T ss_pred             HHHHcCCCEEEECCCcC
Confidence            88888999999998744

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.28  E-value=0.00064  Score=63.96  Aligned_cols=98  Identities=13%  Similarity=0.127  Sum_probs=65.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh---
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV---  155 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~---  155 (380)
                      .+++|||+|| |.+|..+++.+...|++|++++|++++.+...+    ++               ... ..|..+.+   
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----lG---------------a~~-~~d~~~~~~~~  222 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKE----LG---------------ADL-VVNPLKEDAAK  222 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH----TT---------------CSE-EECTTTSCHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----CC---------------CCE-EecCCCccHHH
Confidence            5689999999 779999999999999999999999887665432    21               111 23655432   


Q ss_pred             cHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCC
Q 016901          156 QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (380)
Q Consensus       156 ~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~  214 (380)
                      .+.++.+++|+||+++|..               ......++.++..  .++|.++...
T Consensus       223 ~~~~~~~~~d~vid~~g~~---------------~~~~~~~~~l~~~--G~~v~~g~~~  264 (339)
T 1rjw_A          223 FMKEKVGGVHAAVVTAVSK---------------PAFQSAYNSIRRG--GACVLVGLPP  264 (339)
T ss_dssp             HHHHHHSSEEEEEESSCCH---------------HHHHHHHHHEEEE--EEEEECCCCS
T ss_pred             HHHHHhCCCCEEEECCCCH---------------HHHHHHHHHhhcC--CEEEEecccC
Confidence            2333336899999999742               1233444554444  3788877643

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=97.27  E-value=0.00085  Score=61.47  Aligned_cols=66  Identities=20%  Similarity=0.233  Sum_probs=51.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      +|+|.|.|+||.+|..++..|++.|++|++.+|++++.+.+.+                   .++     +..   +..+
T Consensus        11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~-------------------~g~-----~~~---~~~~   63 (286)
T 3c24_A           11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQG-------------------MGI-----PLT---DGDG   63 (286)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHH-------------------TTC-----CCC---CSSG
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHh-------------------cCC-----CcC---CHHH
Confidence            4689999998999999999999999999999999877665532                   111     112   2345


Q ss_pred             HhcCCCEEEEccc
Q 016901          160 ALGNASVVICCIG  172 (380)
Q Consensus       160 a~~~~d~Vi~~Ag  172 (380)
                      ++.++|+||.+..
T Consensus        64 ~~~~aDvVi~av~   76 (286)
T 3c24_A           64 WIDEADVVVLALP   76 (286)
T ss_dssp             GGGTCSEEEECSC
T ss_pred             HhcCCCEEEEcCC
Confidence            6678999998874

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=97.27  E-value=0.0011  Score=64.83  Aligned_cols=81  Identities=23%  Similarity=0.260  Sum_probs=54.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceE-EE-----EcCCCCh
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLE-LV-----ECDLEKR  154 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~-----~~Dl~d~  154 (380)
                      |+|.|.| +|++|..++..|+++|++|++++|++++.+.+.+.....            ..+++. .+     .+.+.-.
T Consensus         3 mkI~VIG-~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i------------~e~gl~~~l~~~~~~~~l~~t   69 (450)
T 3gg2_A            3 LDIAVVG-IGYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPI------------YEPGLEKMIARNVKAGRLRFG   69 (450)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCC------------CSTTHHHHHHHHHHTTSEEEE
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcc------------cCCCHHHHHHhhcccCcEEEE
Confidence            6899998 799999999999999999999999998877765410000            000000 00     0111112


Q ss_pred             hcHHHHhcCCCEEEEccccC
Q 016901          155 VQIEPALGNASVVICCIGAS  174 (380)
Q Consensus       155 ~~~~~a~~~~d~Vi~~Ag~~  174 (380)
                      .++.+++.++|+||-+.+..
T Consensus        70 ~d~~ea~~~aDvViiaVptp   89 (450)
T 3gg2_A           70 TEIEQAVPEADIIFIAVGTP   89 (450)
T ss_dssp             SCHHHHGGGCSEEEECCCCC
T ss_pred             CCHHHHHhcCCEEEEEcCCC
Confidence            45677888999999998644

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=97.27  E-value=0.0018  Score=63.55  Aligned_cols=99  Identities=16%  Similarity=0.241  Sum_probs=77.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ..++|+|.| .|-+|.++++.| +++++|.++.++.++.+.+.+.+                 ++..++.||-+|++-+.
T Consensus       234 ~~~~v~I~G-gG~ig~~lA~~L-~~~~~v~iIE~d~~r~~~la~~l-----------------~~~~Vi~GD~td~~~L~  294 (461)
T 4g65_A          234 PYRRIMIVG-GGNIGASLAKRL-EQTYSVKLIERNLQRAEKLSEEL-----------------ENTIVFCGDAADQELLT  294 (461)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHH-TTTSEEEEEESCHHHHHHHHHHC-----------------TTSEEEESCTTCHHHHH
T ss_pred             cccEEEEEc-chHHHHHHHHHh-hhcCceEEEecCHHHHHHHHHHC-----------------CCceEEeccccchhhHh
Confidence            346899999 799999999987 56699999999999888876633                 67889999999999887


Q ss_pred             HH-hcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEc
Q 016901          159 PA-LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVS  211 (380)
Q Consensus       159 ~a-~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~S  211 (380)
                      ++ +..+|++|-+.+..           +.|+...    -.|++.|++++|-.-
T Consensus       295 ee~i~~~D~~ia~T~~D-----------e~Ni~~~----llAk~~gv~kvIa~v  333 (461)
T 4g65_A          295 EENIDQVDVFIALTNED-----------ETNIMSA----MLAKRMGAKKVMVLI  333 (461)
T ss_dssp             HTTGGGCSEEEECCSCH-----------HHHHHHH----HHHHHTTCSEEEEEC
T ss_pred             hcCchhhcEEEEcccCc-----------HHHHHHH----HHHHHcCCccccccc
Confidence            65 68899999876531           4566543    346778988877543

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.25  E-value=0.00062  Score=64.18  Aligned_cols=41  Identities=27%  Similarity=0.329  Sum_probs=35.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL  120 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~  120 (380)
                      .+.+|||+||+|.||..+++.+...|++|+++ +++++.+.+
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~  190 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYV  190 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHH
Confidence            56899999999999999999999999999998 777665443

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.23  E-value=0.00092  Score=64.59  Aligned_cols=72  Identities=25%  Similarity=0.360  Sum_probs=55.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      .+++|+|.|+ |.+|+.+++.|...|. +|++.+|+.++.+++.+.+                  +...  .+   .+++
T Consensus       166 ~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~------------------g~~~--~~---~~~l  221 (404)
T 1gpj_A          166 HDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL------------------GGEA--VR---FDEL  221 (404)
T ss_dssp             TTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH------------------TCEE--CC---GGGH
T ss_pred             cCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc------------------CCce--ec---HHhH
Confidence            6789999996 9999999999999998 9999999988765544321                  1221  12   2456


Q ss_pred             HHHhcCCCEEEEccccC
Q 016901          158 EPALGNASVVICCIGAS  174 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag~~  174 (380)
                      .+++.++|+||.+.+..
T Consensus       222 ~~~l~~aDvVi~at~~~  238 (404)
T 1gpj_A          222 VDHLARSDVVVSATAAP  238 (404)
T ss_dssp             HHHHHTCSEEEECCSSS
T ss_pred             HHHhcCCCEEEEccCCC
Confidence            77788999999997643

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=97.23  E-value=0.00099  Score=62.86  Aligned_cols=82  Identities=21%  Similarity=0.160  Sum_probs=53.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCC-ChhcH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLE-KRVQI  157 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~-d~~~~  157 (380)
                      ++|+|.|.| .|.+|..++..|.+.|++|++++|++++.+.+.+.. ...+.+          ..... ...+. ...++
T Consensus         3 ~~mki~iiG-~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~----------~~~~~-~~~~~~~~~~~   69 (359)
T 1bg6_A            3 ESKTYAVLG-LGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRG-AIIAEG----------PGLAG-TAHPDLLTSDI   69 (359)
T ss_dssp             -CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHT-SEEEES----------SSCCE-EECCSEEESCH
T ss_pred             CcCeEEEEC-CCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcC-CeEEec----------ccccc-ccccceecCCH
Confidence            457899999 599999999999999999999999988776654310 000000          00000 01110 12346


Q ss_pred             HHHhcCCCEEEEcccc
Q 016901          158 EPALGNASVVICCIGA  173 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag~  173 (380)
                      .+++.++|+||.+...
T Consensus        70 ~~~~~~~D~vi~~v~~   85 (359)
T 1bg6_A           70 GLAVKDADVILIVVPA   85 (359)
T ss_dssp             HHHHTTCSEEEECSCG
T ss_pred             HHHHhcCCEEEEeCCc
Confidence            6778899999998753

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=97.22  E-value=0.0031  Score=59.64  Aligned_cols=105  Identities=9%  Similarity=0.086  Sum_probs=73.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCc-------------------hhHHHHHHHHHhhhhcccccccCC
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKGI  138 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~  138 (380)
                      ...+|+|.| .|++|+++++.|+..|. ++++++++.                   .|.+.+.+.+..++-         
T Consensus       117 ~~~~VlvvG-~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np---------  186 (353)
T 3h5n_A          117 KNAKVVILG-CGGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNS---------  186 (353)
T ss_dssp             HTCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCT---------
T ss_pred             hCCeEEEEC-CCHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCC---------
Confidence            467899999 58999999999999995 788888753                   355556665555431         


Q ss_pred             CCCCceEEEEcCCCChhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHH-HHHHHHHHHHHcCCCEEEEEcc
Q 016901          139 QPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQ-ATKNLVDAATIAKVNHFIMVSS  212 (380)
Q Consensus       139 ~~~~~v~~~~~Dl~d~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~-g~~~ll~a~~~~~v~r~V~~SS  212 (380)
                        .-+++.+..++++..++.+ +.++|.||.+...               .. .-..+-++|.+.++. +|+.+.
T Consensus       187 --~v~v~~~~~~i~~~~~~~~-~~~~DlVvd~~Dn---------------~~~~r~~ln~~c~~~~~p-~i~~~~  242 (353)
T 3h5n_A          187 --EISVSEIALNINDYTDLHK-VPEADIWVVSADH---------------PFNLINWVNKYCVRANQP-YINAGY  242 (353)
T ss_dssp             --TSEEEEEECCCCSGGGGGG-SCCCSEEEECCCC---------------STTHHHHHHHHHHHTTCC-EEEEEE
T ss_pred             --CCeEEEeecccCchhhhhH-hccCCEEEEecCC---------------hHHHHHHHHHHHHHhCCC-EEEEEE
Confidence              1356677778877665677 8999999997531               11 123345778888864 665543

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*

Probab=97.21  E-value=0.0027  Score=60.25  Aligned_cols=118  Identities=9%  Similarity=0.053  Sum_probs=72.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC--e---EEEEeCCch----hHHHHHHHHHhhhhcccccccCCCCCCceEEEEc
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGF--R---VRAGVRSVQ----RAENLVQSVKQMKLDGELANKGIQPVEMLELVEC  149 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~--~---V~~l~R~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  149 (380)
                      ...+|.|+||+|.||.+++-.|+..+.  +   |.+..-+.+    +++...-.+.....+         ...++.+  .
T Consensus        31 ~~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p---------~~~~v~i--~   99 (375)
T 7mdh_A           31 KLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYP---------LLREVSI--G   99 (375)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCT---------TEEEEEE--E
T ss_pred             CCCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhh---------hcCCcEE--e
Confidence            457899999999999999999998863  2   655433322    233332222221100         0012222  1


Q ss_pred             CCCChhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHc-CCC-EEEEEcc
Q 016901          150 DLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA-KVN-HFIMVSS  212 (380)
Q Consensus       150 Dl~d~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~-~v~-r~V~~SS  212 (380)
                           ..-.++++++|+||-+||.......+....++.|..-.+.+.+++.+. +.. .++.+|.
T Consensus       100 -----~~~y~~~~daDvVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsN  159 (375)
T 7mdh_A          100 -----IDPYEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGN  159 (375)
T ss_dssp             -----SCHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             -----cCCHHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecC
Confidence                 123578899999999998654333333444778888889998888875 433 4555553

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.21  E-value=0.00084  Score=63.37  Aligned_cols=98  Identities=9%  Similarity=0.164  Sum_probs=65.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCCh---hc
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR---VQ  156 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~---~~  156 (380)
                      +++|+|+||+|.||..+++.+...|++|+++++++++.+.+.+    ++             .. .+  .|..+.   +.
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----~G-------------a~-~~--~~~~~~~~~~~  224 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKD----IG-------------AA-HV--LNEKAPDFEAT  224 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHH----HT-------------CS-EE--EETTSTTHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cC-------------CC-EE--EECCcHHHHHH
Confidence            3789999999999999999988899999999999887765532    21             11 12  233332   22


Q ss_pred             HHHHh--cCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCC
Q 016901          157 IEPAL--GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT  215 (380)
Q Consensus       157 ~~~a~--~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~  215 (380)
                      +.++.  .++|+||+|+|..                .....++.++..  .++|.++....
T Consensus       225 v~~~~~~~g~D~vid~~g~~----------------~~~~~~~~l~~~--G~iv~~G~~~~  267 (349)
T 3pi7_A          225 LREVMKAEQPRIFLDAVTGP----------------LASAIFNAMPKR--ARWIIYGRLDP  267 (349)
T ss_dssp             HHHHHHHHCCCEEEESSCHH----------------HHHHHHHHSCTT--CEEEECCCSCC
T ss_pred             HHHHhcCCCCcEEEECCCCh----------------hHHHHHhhhcCC--CEEEEEeccCC
Confidence            33333  3799999999742                123344544433  47998886543

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=97.17  E-value=0.0031  Score=59.83  Aligned_cols=69  Identities=22%  Similarity=0.154  Sum_probs=51.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ++.+|+|.|.| .|.+|..++..|++.|++|++.+|++++.+.+.+                   .++       ....+
T Consensus        19 Mm~~mkIgiIG-lG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~-------------------~g~-------~~~~s   71 (358)
T 4e21_A           19 YFQSMQIGMIG-LGRMGADMVRRLRKGGHECVVYDLNVNAVQALER-------------------EGI-------AGARS   71 (358)
T ss_dssp             ---CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHT-------------------TTC-------BCCSS
T ss_pred             hhcCCEEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH-------------------CCC-------EEeCC
Confidence            34568999999 8999999999999999999999999988776542                   122       11234


Q ss_pred             HHHHhcCC---CEEEEccc
Q 016901          157 IEPALGNA---SVVICCIG  172 (380)
Q Consensus       157 ~~~a~~~~---d~Vi~~Ag  172 (380)
                      +.+++..+   |+||.+..
T Consensus        72 ~~e~~~~a~~~DvVi~~vp   90 (358)
T 4e21_A           72 IEEFCAKLVKPRVVWLMVP   90 (358)
T ss_dssp             HHHHHHHSCSSCEEEECSC
T ss_pred             HHHHHhcCCCCCEEEEeCC
Confidence            55666555   99999874

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.16  E-value=0.0033  Score=59.51  Aligned_cols=100  Identities=11%  Similarity=0.064  Sum_probs=64.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFR-VRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~-V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      .+.+|||+|| |.+|...++.+...|.+ |+++++++++.+...+. -                ..+.....|-.+.+++
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~----------------~~~~~~~~~~~~~~~~  240 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-C----------------PEVVTHKVERLSAEES  240 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-C----------------TTCEEEECCSCCHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-c----------------hhcccccccccchHHH
Confidence            5678999998 99999999888889987 99999998877655431 1                2233333343333434


Q ss_pred             HH----Hh--cCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccC
Q 016901          158 EP----AL--GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL  213 (380)
Q Consensus       158 ~~----a~--~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~  213 (380)
                      .+    +.  .++|+||.++|..               ......++.++..  +++|.++..
T Consensus       241 ~~~v~~~t~g~g~Dvvid~~g~~---------------~~~~~~~~~l~~~--G~iv~~G~~  285 (363)
T 3m6i_A          241 AKKIVESFGGIEPAVALECTGVE---------------SSIAAAIWAVKFG--GKVFVIGVG  285 (363)
T ss_dssp             HHHHHHHTSSCCCSEEEECSCCH---------------HHHHHHHHHSCTT--CEEEECCCC
T ss_pred             HHHHHHHhCCCCCCEEEECCCCh---------------HHHHHHHHHhcCC--CEEEEEccC
Confidence            33    33  2699999998742               1123344444433  478887753

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=97.14  E-value=0.0034  Score=58.48  Aligned_cols=67  Identities=22%  Similarity=0.281  Sum_probs=53.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      .+|+|.|.| .|.+|..++..|++.|++|++.+|++++.+.+.+                   .++..       ..++.
T Consensus        30 ~~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~-------------------~g~~~-------~~~~~   82 (320)
T 4dll_A           30 YARKITFLG-TGSMGLPMARRLCEAGYALQVWNRTPARAASLAA-------------------LGATI-------HEQAR   82 (320)
T ss_dssp             CCSEEEEEC-CTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHT-------------------TTCEE-------ESSHH
T ss_pred             CCCEEEEEC-ccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHH-------------------CCCEe-------eCCHH
Confidence            567899998 7999999999999999999999999988776543                   22221       24567


Q ss_pred             HHhcCCCEEEEccc
Q 016901          159 PALGNASVVICCIG  172 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag  172 (380)
                      +++.++|+||-+..
T Consensus        83 e~~~~aDvVi~~vp   96 (320)
T 4dll_A           83 AAARDADIVVSMLE   96 (320)
T ss_dssp             HHHTTCSEEEECCS
T ss_pred             HHHhcCCEEEEECC
Confidence            78888999998874

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=97.14  E-value=0.001  Score=65.01  Aligned_cols=43  Identities=26%  Similarity=0.309  Sum_probs=38.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL  120 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~  120 (380)
                      ..+++|||+||+|.||..+++.+...|.+|+++++++++.+.+
T Consensus       219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~  261 (447)
T 4a0s_A          219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV  261 (447)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            3578999999999999999999999999999999988776654

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=97.14  E-value=0.0044  Score=55.44  Aligned_cols=73  Identities=23%  Similarity=0.217  Sum_probs=51.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~-G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      ++|.|.|++|.+|+.+++.+.+. |++|++..+..+..+.+..                   .... +..|++.++...+
T Consensus         1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~-------------------~~~D-vvIDfT~p~a~~~   60 (245)
T 1p9l_A            1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTD-------------------GNTE-VVIDFTHPDVVMG   60 (245)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHH-------------------TTCC-EEEECSCTTTHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhc-------------------cCCc-EEEEccChHHHHH
Confidence            47999999999999999999876 8999877654443333221                   1233 4678888877664


Q ss_pred             Hh-----cCCCEEEEcccc
Q 016901          160 AL-----GNASVVICCIGA  173 (380)
Q Consensus       160 a~-----~~~d~Vi~~Ag~  173 (380)
                      .+     .+++.|+-+.|.
T Consensus        61 ~~~~a~~~g~~~VigTTG~   79 (245)
T 1p9l_A           61 NLEFLIDNGIHAVVGTTGF   79 (245)
T ss_dssp             HHHHHHHTTCEEEECCCCC
T ss_pred             HHHHHHHcCCCEEEcCCCC
Confidence            43     478998877663

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=97.13  E-value=0.0014  Score=60.78  Aligned_cols=67  Identities=19%  Similarity=0.234  Sum_probs=51.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      .+|+|.|.| .|.+|..++..|++.|++|++.+|++++.+.+.+                   .++..       ..++.
T Consensus        20 ~m~~I~iIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~-------------------~g~~~-------~~~~~   72 (310)
T 3doj_A           20 HMMEVGFLG-LGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVE-------------------HGASV-------CESPA   72 (310)
T ss_dssp             CSCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHH-------------------TTCEE-------CSSHH
T ss_pred             cCCEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-------------------CCCeE-------cCCHH
Confidence            567899998 8999999999999999999999999988777643                   12221       23455


Q ss_pred             HHhcCCCEEEEccc
Q 016901          159 PALGNASVVICCIG  172 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag  172 (380)
                      +++.++|+||-+..
T Consensus        73 ~~~~~aDvvi~~vp   86 (310)
T 3doj_A           73 EVIKKCKYTIAMLS   86 (310)
T ss_dssp             HHHHHCSEEEECCS
T ss_pred             HHHHhCCEEEEEcC
Confidence            66667787777764

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=97.11  E-value=0.0034  Score=57.81  Aligned_cols=65  Identities=11%  Similarity=0.028  Sum_probs=52.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      .++|.|.| .|.+|..++..|++.|++|++.+|++++.+.+.+                   .++.+       ..++++
T Consensus        15 ~~~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~-------------------~g~~~-------~~~~~~   67 (296)
T 3qha_A           15 QLKLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAE-------------------AGATL-------ADSVAD   67 (296)
T ss_dssp             CCCEEEEC-CSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHH-------------------TTCEE-------CSSHHH
T ss_pred             CCeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-------------------CCCEE-------cCCHHH
Confidence            46899998 8999999999999999999999999988776653                   22322       245677


Q ss_pred             HhcCCCEEEEccc
Q 016901          160 ALGNASVVICCIG  172 (380)
Q Consensus       160 a~~~~d~Vi~~Ag  172 (380)
                      +++ +|+||.+..
T Consensus        68 ~~~-aDvvi~~vp   79 (296)
T 3qha_A           68 VAA-ADLIHITVL   79 (296)
T ss_dssp             HTT-SSEEEECCS
T ss_pred             HHh-CCEEEEECC
Confidence            788 999999874

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.10  E-value=0.002  Score=61.40  Aligned_cols=74  Identities=16%  Similarity=0.221  Sum_probs=49.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      .+.+|||+||+|.||..+++.+...|.+|++.+ +.++.+.+    ++++             .. .+  .|..+.+..+
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~----~~lG-------------a~-~v--~~~~~~~~~~  241 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELV----RKLG-------------AD-DV--IDYKSGSVEE  241 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHH----HHTT-------------CS-EE--EETTSSCHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHH----HHcC-------------CC-EE--EECCchHHHH
Confidence            568999999999999999999988999999988 44544333    2221             11 11  2444432222


Q ss_pred             HHh--cCCCEEEEcccc
Q 016901          159 PAL--GNASVVICCIGA  173 (380)
Q Consensus       159 ~a~--~~~d~Vi~~Ag~  173 (380)
                      ++.  .++|+||+|+|.
T Consensus       242 ~~~~~~g~D~vid~~g~  258 (375)
T 2vn8_A          242 QLKSLKPFDFILDNVGG  258 (375)
T ss_dssp             HHHTSCCBSEEEESSCT
T ss_pred             HHhhcCCCCEEEECCCC
Confidence            222  479999999984

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.10  E-value=0.0024  Score=58.98  Aligned_cols=71  Identities=20%  Similarity=0.285  Sum_probs=54.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      ..+++|+|.| .|.+|+.+++.|...|++|++.+|+.++.+.+.+                   .+++.+     +..++
T Consensus       155 l~g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~-------------------~g~~~~-----~~~~l  209 (300)
T 2rir_A          155 IHGSQVAVLG-LGRTGMTIARTFAALGANVKVGARSSAHLARITE-------------------MGLVPF-----HTDEL  209 (300)
T ss_dssp             STTSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-------------------TTCEEE-----EGGGH
T ss_pred             CCCCEEEEEc-ccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-------------------CCCeEE-----chhhH
Confidence            4678999999 5999999999999999999999999876544322                   123322     13457


Q ss_pred             HHHhcCCCEEEEcccc
Q 016901          158 EPALGNASVVICCIGA  173 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag~  173 (380)
                      .+++.++|+||.+...
T Consensus       210 ~~~l~~aDvVi~~~p~  225 (300)
T 2rir_A          210 KEHVKDIDICINTIPS  225 (300)
T ss_dssp             HHHSTTCSEEEECCSS
T ss_pred             HHHhhCCCEEEECCCh
Confidence            7888999999999864

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.09  E-value=0.00042  Score=63.34  Aligned_cols=69  Identities=20%  Similarity=0.275  Sum_probs=52.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      .+++++|+|+ |.+|+.++..|++.|+ +|++..|+.++.+++.                    ..+..+     ..+++
T Consensus       116 ~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la--------------------~~~~~~-----~~~~~  169 (277)
T 3don_A          116 EDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWS--------------------LNINKI-----NLSHA  169 (277)
T ss_dssp             GGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCC--------------------SCCEEE-----CHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHH--------------------Hhcccc-----cHhhH
Confidence            5689999995 8999999999999998 8999999988755431                    122221     23456


Q ss_pred             HHHhcCCCEEEEcccc
Q 016901          158 EPALGNASVVICCIGA  173 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag~  173 (380)
                      .+++.++|+||++...
T Consensus       170 ~~~~~~aDiVInaTp~  185 (277)
T 3don_A          170 ESHLDEFDIIINTTPA  185 (277)
T ss_dssp             HHTGGGCSEEEECCC-
T ss_pred             HHHhcCCCEEEECccC
Confidence            6778889999998753

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}

Probab=97.08  E-value=0.0046  Score=57.32  Aligned_cols=113  Identities=12%  Similarity=0.166  Sum_probs=74.1

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEE-cCCCChhcHHH
Q 016901           82 LAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVE-CDLEKRVQIEP  159 (380)
Q Consensus        82 ~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~Dl~d~~~~~~  159 (380)
                      +|.|+|| |.+|..++..|+..|. +|+++++++++++.....+.......         .....+.. .|      + +
T Consensus         1 KI~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~---------~~~~~i~~t~d------~-~   63 (308)
T 2d4a_B            1 MITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAEL---------GVDIRISGSNS------Y-E   63 (308)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHH---------TCCCCEEEESC------G-G
T ss_pred             CEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhc---------CCCeEEEECCC------H-H
Confidence            4899997 9999999999998887 69999999877765444333211000         01222222 22      3 4


Q ss_pred             HhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCC-EEEEEc
Q 016901          160 ALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVS  211 (380)
Q Consensus       160 a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~-r~V~~S  211 (380)
                      +++++|+||.++|...............|+.-.+.+++.+.+.... .++.+|
T Consensus        64 a~~~aD~Vi~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  116 (308)
T 2d4a_B           64 DMRGSDIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAYAKDAIVVITT  116 (308)
T ss_dssp             GGTTCSEEEECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             HhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeC
Confidence            6889999999998654322222233566888888888888876644 555554

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.07  E-value=0.0016  Score=61.40  Aligned_cols=43  Identities=19%  Similarity=0.210  Sum_probs=37.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLV  121 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~  121 (380)
                      .+.+|||+||+|.+|..+++.+...|++|+++++++++.+.+.
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~  192 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTK  192 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHH
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence            4679999999999999999999999999999999887766544

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=97.05  E-value=0.0019  Score=63.08  Aligned_cols=95  Identities=13%  Similarity=0.082  Sum_probs=64.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCC-C---eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCCh-
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLG-F---RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR-  154 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G-~---~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~-  154 (380)
                      .++|+|.| .|.||+.+++.|++++ +   +|++.+.+....+. .+   .               .++.+...++++. 
T Consensus        13 ~~rVlIIG-aGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~-~~---~---------------~g~~~~~~~Vdadn   72 (480)
T 2ph5_A           13 KNRFVILG-FGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDV-AQ---Q---------------YGVSFKLQQITPQN   72 (480)
T ss_dssp             CSCEEEEC-CSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCH-HH---H---------------HTCEEEECCCCTTT
T ss_pred             CCCEEEEC-cCHHHHHHHHHHHhCCCCceeEEEEeccchhhhhH-Hh---h---------------cCCceeEEeccchh
Confidence            35799999 9999999999999874 4   68888776543211 11   0               2355666666543 


Q ss_pred             --hcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccC
Q 016901          155 --VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL  213 (380)
Q Consensus       155 --~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~  213 (380)
                        +.+.+++++.|+|||++-..                ....++++|.+.|+   .|+.++
T Consensus        73 v~~~l~aLl~~~DvVIN~s~~~----------------~~l~Im~acleaGv---~YlDTa  114 (480)
T 2ph5_A           73 YLEVIGSTLEENDFLIDVSIGI----------------SSLALIILCNQKGA---LYINAA  114 (480)
T ss_dssp             HHHHTGGGCCTTCEEEECCSSS----------------CHHHHHHHHHHHTC---EEEESS
T ss_pred             HHHHHHHHhcCCCEEEECCccc----------------cCHHHHHHHHHcCC---CEEECC
Confidence              34566777779999865221                15568999999986   355554

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=97.03  E-value=0.0032  Score=57.95  Aligned_cols=70  Identities=23%  Similarity=0.308  Sum_probs=54.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      ..+++|+|.| .|.+|+.+++.|...|.+|++.+|+.++.+...+                   .++..+     +.+++
T Consensus       153 l~g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~-------------------~g~~~~-----~~~~l  207 (293)
T 3d4o_A          153 IHGANVAVLG-LGRVGMSVARKFAALGAKVKVGARESDLLARIAE-------------------MGMEPF-----HISKA  207 (293)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-------------------TTSEEE-----EGGGH
T ss_pred             CCCCEEEEEe-eCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-------------------CCCeec-----ChhhH
Confidence            4678999999 7999999999999999999999999876543321                   123322     13457


Q ss_pred             HHHhcCCCEEEEccc
Q 016901          158 EPALGNASVVICCIG  172 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag  172 (380)
                      .+++.++|+||.++.
T Consensus       208 ~~~l~~aDvVi~~~p  222 (293)
T 3d4o_A          208 AQELRDVDVCINTIP  222 (293)
T ss_dssp             HHHTTTCSEEEECCS
T ss_pred             HHHhcCCCEEEECCC
Confidence            788899999999875

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.01  E-value=0.0022  Score=59.38  Aligned_cols=36  Identities=25%  Similarity=0.408  Sum_probs=30.8

Q ss_pred             CCCe-EEEE-cCC-----------------ChHHHHHHHHHHHCCCeEEEEeCCc
Q 016901           79 DDNL-AFVA-GAT-----------------GKVGSRTVRELLKLGFRVRAGVRSV  114 (380)
Q Consensus        79 ~~~~-vlVt-Gat-----------------G~iG~~lv~~Ll~~G~~V~~l~R~~  114 (380)
                      .+++ |||| |+|                 |..|.+++++++++|++|+++.|..
T Consensus        35 ~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~   89 (313)
T 1p9o_A           35 QGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRAR   89 (313)
T ss_dssp             TTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred             cCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCC
Confidence            4455 8888 666                 9999999999999999999998854

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=97.01  E-value=0.0012  Score=60.15  Aligned_cols=36  Identities=19%  Similarity=0.279  Sum_probs=29.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEE-eCCc
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKL-GFRVRAG-VRSV  114 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~-G~~V~~l-~R~~  114 (380)
                      ++++|.|.||+|.+|+.+++.+.+. ++++++. +|+.
T Consensus         6 ~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~   43 (272)
T 4f3y_A            6 SSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTG   43 (272)
T ss_dssp             CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTT
T ss_pred             cccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecC
Confidence            4679999999999999999999876 5777774 5654

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=97.00  E-value=0.005  Score=57.65  Aligned_cols=80  Identities=14%  Similarity=0.283  Sum_probs=57.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCc-------------------hhHHHHHHHHHhhhhcccccccCC
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKGI  138 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~  138 (380)
                      ...+|+|.| .|++|+++++.|+..|. ++++++++.                   .|.+.+.+.+..++          
T Consensus        33 ~~~~VlIvG-aGGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~in----------  101 (340)
T 3rui_A           33 KNTKVLLLG-AGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIF----------  101 (340)
T ss_dssp             HTCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHC----------
T ss_pred             hCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhC----------
Confidence            457899999 79999999999999995 677777643                   45666666666543          


Q ss_pred             CCCCceE--EEEcCCC--------------ChhcHHHHhcCCCEEEEccc
Q 016901          139 QPVEMLE--LVECDLE--------------KRVQIEPALGNASVVICCIG  172 (380)
Q Consensus       139 ~~~~~v~--~~~~Dl~--------------d~~~~~~a~~~~d~Vi~~Ag  172 (380)
                         +.++  .+..++.              +.+.+.+.++++|+||++.-
T Consensus       102 ---P~v~v~~~~~~i~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~tD  148 (340)
T 3rui_A          102 ---PLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVD  148 (340)
T ss_dssp             ---TTCEEEEECCCCCCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECCS
T ss_pred             ---CCCEEEEEeccccccCcccchhhhhcCCHHHHHhhhccCCEEEecCC
Confidence               4444  4444331              23456678899999999863

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=96.99  E-value=0.00086  Score=63.12  Aligned_cols=40  Identities=15%  Similarity=0.160  Sum_probs=34.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAEN  119 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~~~~  119 (380)
                      .+.+|||+|| |.+|..+++.+...|+ +|+++++++++.+.
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~  204 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAF  204 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGG
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH
Confidence            5678999999 9999999998888998 99999998776543

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.99  E-value=0.0021  Score=58.79  Aligned_cols=65  Identities=23%  Similarity=0.209  Sum_probs=51.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      |+|.|.| .|.+|..++..|++.|++|++.+|++++.+.+.+                   .++..       ..++.++
T Consensus         2 ~~i~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~-------------------~g~~~-------~~~~~~~   54 (287)
T 3pef_A            2 QKFGFIG-LGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAA-------------------LGAER-------AATPCEV   54 (287)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHH-------------------TTCEE-------CSSHHHH
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH-------------------CCCee-------cCCHHHH
Confidence            6899999 7999999999999999999999999988777654                   22221       2456677


Q ss_pred             hcCCCEEEEccc
Q 016901          161 LGNASVVICCIG  172 (380)
Q Consensus       161 ~~~~d~Vi~~Ag  172 (380)
                      +.++|+||.+..
T Consensus        55 ~~~aDvvi~~vp   66 (287)
T 3pef_A           55 VESCPVTFAMLA   66 (287)
T ss_dssp             HHHCSEEEECCS
T ss_pred             HhcCCEEEEEcC
Confidence            777888888764

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=96.98  E-value=0.0025  Score=62.45  Aligned_cols=43  Identities=30%  Similarity=0.268  Sum_probs=37.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL  120 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~  120 (380)
                      ..+.+|||+||+|.||...++.+...|.+|+++++++++.+.+
T Consensus       227 ~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~  269 (456)
T 3krt_A          227 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEIC  269 (456)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHH
Confidence            3568999999999999999999999999999999988776654

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=96.96  E-value=0.0016  Score=61.94  Aligned_cols=74  Identities=16%  Similarity=0.175  Sum_probs=54.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      .+.+|||+|+ |.+|..+++.+...|++|+++++++++.+.+.+    ++             .. .+  .|..+.+.++
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~----lG-------------a~-~v--i~~~~~~~~~  252 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA----LG-------------AD-EV--VNSRNADEMA  252 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----HT-------------CS-EE--EETTCHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cC-------------Cc-EE--eccccHHHHH
Confidence            5679999997 889999998888899999999999887765432    21             11 11  3444544344


Q ss_pred             HHhcCCCEEEEcccc
Q 016901          159 PALGNASVVICCIGA  173 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~  173 (380)
                      ++.+++|+||+++|.
T Consensus       253 ~~~~g~Dvvid~~g~  267 (369)
T 1uuf_A          253 AHLKSFDFILNTVAA  267 (369)
T ss_dssp             TTTTCEEEEEECCSS
T ss_pred             HhhcCCCEEEECCCC
Confidence            444689999999985

>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}

Probab=96.96  E-value=0.0036  Score=60.85  Aligned_cols=42  Identities=26%  Similarity=0.135  Sum_probs=37.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLV  121 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~  121 (380)
                      .+.+|.|.| .|++|.-++..|++.|++|++++.++++.+.+.
T Consensus        20 ~m~~IaViG-lGYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln   61 (444)
T 3vtf_A           20 HMASLSVLG-LGYVGVVHAVGFALLGHRVVGYDVNPSIVERLR   61 (444)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHH
T ss_pred             CCCEEEEEc-cCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHH
Confidence            556899998 999999999999999999999999998877764

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.95  E-value=0.0016  Score=61.46  Aligned_cols=70  Identities=20%  Similarity=0.246  Sum_probs=51.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      .+.+|||+|+ |.+|...++.+...|.+|+++++++++.+.+.+    ++             .. .++    .+.+.+.
T Consensus       176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----lG-------------a~-~v~----~~~~~~~  232 (348)
T 3two_A          176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDALS----MG-------------VK-HFY----TDPKQCK  232 (348)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHH----TT-------------CS-EEE----SSGGGCC
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHh----cC-------------CC-eec----CCHHHHh
Confidence            5789999997 999999999888899999999999888765433    21             11 122    3444443


Q ss_pred             HHhcCCCEEEEccccC
Q 016901          159 PALGNASVVICCIGAS  174 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~  174 (380)
                      +   ++|+||+++|..
T Consensus       233 ~---~~D~vid~~g~~  245 (348)
T 3two_A          233 E---ELDFIISTIPTH  245 (348)
T ss_dssp             S---CEEEEEECCCSC
T ss_pred             c---CCCEEEECCCcH
Confidence            3   899999998853

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=96.93  E-value=0.0008  Score=59.24  Aligned_cols=43  Identities=12%  Similarity=0.148  Sum_probs=37.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEE-EeCCchhHHHHHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRA-GVRSVQRAENLVQ  122 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~-l~R~~~~~~~~~~  122 (380)
                      ++|+|.|.| +|.+|..++..|++.|++|++ .+|++++.+.+.+
T Consensus        22 ~mmkI~IIG-~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~   65 (220)
T 4huj_A           22 SMTTYAIIG-AGAIGSALAERFTAAQIPAIIANSRGPASLSSVTD   65 (220)
T ss_dssp             GSCCEEEEE-CHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHH
T ss_pred             cCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHH
Confidence            457899999 999999999999999999999 8899888776554

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=96.91  E-value=0.002  Score=61.32  Aligned_cols=75  Identities=17%  Similarity=0.207  Sum_probs=56.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCC-------
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDL-------  151 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl-------  151 (380)
                      .+.+|+|+|+ |-+|..+++.|...|.+|++++|++.+.+.+.+                   -+.+++..|+       
T Consensus       183 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~-------------------lGa~~~~l~~~~~~~~g  242 (381)
T 3p2y_A          183 KPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS-------------------VGAQWLDLGIDAAGEGG  242 (381)
T ss_dssp             CCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH-------------------TTCEECCCC--------
T ss_pred             CCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-------------------cCCeEEecccccccccc
Confidence            4578999995 999999999999999999999999987766543                   1223322221       


Q ss_pred             -----------CChhcHHHHhcCCCEEEEcccc
Q 016901          152 -----------EKRVQIEPALGNASVVICCIGA  173 (380)
Q Consensus       152 -----------~d~~~~~~a~~~~d~Vi~~Ag~  173 (380)
                                 .+.+.+.+++.++|+||.++..
T Consensus       243 ya~~~~~~~~~~~~~~l~e~l~~aDIVI~tv~i  275 (381)
T 3p2y_A          243 YARELSEAERAQQQQALEDAITKFDIVITTALV  275 (381)
T ss_dssp             -----CHHHHHHHHHHHHHHHTTCSEEEECCCC
T ss_pred             chhhhhHHHHhhhHHHHHHHHhcCCEEEECCCC
Confidence                       1235677888999999998754

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=96.91  E-value=0.0011  Score=62.96  Aligned_cols=74  Identities=14%  Similarity=0.155  Sum_probs=52.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      .+.+|||+|| |.+|..+++.+...|++|+++++++++.+.+.+    ++             .. .+  .|..+..++.
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~----lG-------------a~-~v--~~~~~~~~~~  237 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMK----MG-------------AD-HY--IATLEEGDWG  237 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH----HT-------------CS-EE--EEGGGTSCHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH----cC-------------CC-EE--EcCcCchHHH
Confidence            5679999999 999999998888889999999998887665432    21             11 11  2333331233


Q ss_pred             HHh-cCCCEEEEcccc
Q 016901          159 PAL-GNASVVICCIGA  173 (380)
Q Consensus       159 ~a~-~~~d~Vi~~Ag~  173 (380)
                      +.+ +++|+||+++|.
T Consensus       238 ~~~~~~~D~vid~~g~  253 (360)
T 1piw_A          238 EKYFDTFDLIVVCASS  253 (360)
T ss_dssp             HHSCSCEEEEEECCSC
T ss_pred             HHhhcCCCEEEECCCC
Confidence            333 589999999985

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.90  E-value=0.0034  Score=56.97  Aligned_cols=41  Identities=27%  Similarity=0.250  Sum_probs=37.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLV  121 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~  121 (380)
                      +++++|.|+ |+.|+.++..|++.|.+|++.+|+.++.+++.
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la  158 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ  158 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            689999995 99999999999999999999999999887765

>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1

Probab=96.89  E-value=0.061  Score=49.19  Aligned_cols=90  Identities=19%  Similarity=0.290  Sum_probs=60.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      +.++|+|.|++|..|+.+++.|.+.|++++..+.......+                     ..++.+       ..+++
T Consensus         6 ~~~~VaVvGasG~~G~~~~~~l~~~g~~~v~~VnP~~~g~~---------------------i~G~~v-------y~sl~   57 (288)
T 1oi7_A            6 RETRVLVQGITGREGQFHTKQMLTYGTKIVAGVTPGKGGME---------------------VLGVPV-------YDTVK   57 (288)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCE---------------------ETTEEE-------ESSHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHcCCeEEEEECCCCCCce---------------------ECCEEe-------eCCHH
Confidence            45789999999999999999999999986543322110000                     011221       24466


Q ss_pred             HHhc--CCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEcc
Q 016901          159 PALG--NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (380)
Q Consensus       159 ~a~~--~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS  212 (380)
                      ++.+  ++|++|.+...                ..+..+++.|.+.|++.+|.+++
T Consensus        58 el~~~~~~Dv~Ii~vp~----------------~~~~~~~~ea~~~Gi~~vVi~t~   97 (288)
T 1oi7_A           58 EAVAHHEVDASIIFVPA----------------PAAADAALEAAHAGIPLIVLITE   97 (288)
T ss_dssp             HHHHHSCCSEEEECCCH----------------HHHHHHHHHHHHTTCSEEEECCS
T ss_pred             HHhhcCCCCEEEEecCH----------------HHHHHHHHHHHHCCCCEEEEECC
Confidence            6666  89999987632                34677888888899987776664

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=96.88  E-value=0.0024  Score=58.70  Aligned_cols=65  Identities=17%  Similarity=0.232  Sum_probs=50.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      |+|.|.| .|.+|..++..|++.|++|++.+|++++.+.+.+                   .++..       ..++.++
T Consensus         6 m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~-------------------~g~~~-------~~~~~~~   58 (299)
T 1vpd_A            6 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIA-------------------AGAET-------ASTAKAI   58 (299)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-------------------TTCEE-------CSSHHHH
T ss_pred             ceEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH-------------------CCCee-------cCCHHHH
Confidence            6899999 7999999999999999999999999887766543                   12221       1235566


Q ss_pred             hcCCCEEEEccc
Q 016901          161 LGNASVVICCIG  172 (380)
Q Consensus       161 ~~~~d~Vi~~Ag  172 (380)
                      +.++|+||.+..
T Consensus        59 ~~~~D~vi~~v~   70 (299)
T 1vpd_A           59 AEQCDVIITMLP   70 (299)
T ss_dssp             HHHCSEEEECCS
T ss_pred             HhCCCEEEEECC
Confidence            778999998875

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.88  E-value=0.0013  Score=61.34  Aligned_cols=74  Identities=12%  Similarity=0.144  Sum_probs=52.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      .+.+|+|+||+|.+|...++.+...|.+|++++++. +.+.    .++++             .. .  ..|..+.+.+.
T Consensus       152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~-~~~~----~~~lG-------------a~-~--~i~~~~~~~~~  210 (321)
T 3tqh_A          152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKR-NHAF----LKALG-------------AE-Q--CINYHEEDFLL  210 (321)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHH-HHHH----HHHHT-------------CS-E--EEETTTSCHHH
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccc-hHHH----HHHcC-------------CC-E--EEeCCCcchhh
Confidence            578999999999999999999999999999987543 3222    22232             11 1  23444444366


Q ss_pred             HHhcCCCEEEEcccc
Q 016901          159 PALGNASVVICCIGA  173 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~  173 (380)
                      +.+.++|+||+++|.
T Consensus       211 ~~~~g~D~v~d~~g~  225 (321)
T 3tqh_A          211 AISTPVDAVIDLVGG  225 (321)
T ss_dssp             HCCSCEEEEEESSCH
T ss_pred             hhccCCCEEEECCCc
Confidence            667899999999873

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=96.87  E-value=0.0059  Score=57.53  Aligned_cols=96  Identities=19%  Similarity=0.183  Sum_probs=62.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCC----h
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK----R  154 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d----~  154 (380)
                      .+.+|||+|+ |.+|..+++.+...|++|+++++++++.+.+.+    ++             .. .+  .|..+    .
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----lG-------------a~-~~--~~~~~~~~~~  226 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN----CG-------------AD-VT--LVVDPAKEEE  226 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----TT-------------CS-EE--EECCTTTSCH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH----hC-------------CC-EE--EcCcccccHH
Confidence            5679999996 999999999888899999999999877655432    21             11 12  23332    2


Q ss_pred             hcHHHHh-----cCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEcc
Q 016901          155 VQIEPAL-----GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (380)
Q Consensus       155 ~~~~~a~-----~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS  212 (380)
                      +.+.+..     .++|+||+++|...               .....++.++..  .++|.++.
T Consensus       227 ~~i~~~~~~~~g~g~D~vid~~g~~~---------------~~~~~~~~l~~~--G~iv~~G~  272 (352)
T 1e3j_A          227 SSIIERIRSAIGDLPNVTIDCSGNEK---------------CITIGINITRTG--GTLMLVGM  272 (352)
T ss_dssp             HHHHHHHHHHSSSCCSEEEECSCCHH---------------HHHHHHHHSCTT--CEEEECSC
T ss_pred             HHHHHHhccccCCCCCEEEECCCCHH---------------HHHHHHHHHhcC--CEEEEEec
Confidence            3444444     36999999987421               123344444433  47888765

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=96.86  E-value=0.0027  Score=58.10  Aligned_cols=43  Identities=14%  Similarity=0.195  Sum_probs=37.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLV  121 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~~~~~~  121 (380)
                      ..+++++|+|+ |+.|+.++..|.+.|. +|+++.|+.++.+++.
T Consensus       120 ~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La  163 (282)
T 3fbt_A          120 IKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIY  163 (282)
T ss_dssp             CTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHC
T ss_pred             ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH
Confidence            35789999995 8899999999999997 8999999998877653

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=96.86  E-value=0.0022  Score=59.25  Aligned_cols=43  Identities=23%  Similarity=0.304  Sum_probs=37.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQ  122 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~  122 (380)
                      ++|+|.|.| .|.+|..++..|++.|++|++.+|++++.+.+.+
T Consensus         6 ~~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~   48 (303)
T 3g0o_A            6 TDFHVGIVG-LGSMGMGAARSCLRAGLSTWGADLNPQACANLLA   48 (303)
T ss_dssp             -CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH
Confidence            457899998 8999999999999999999999999988776543

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=96.86  E-value=0.0041  Score=59.65  Aligned_cols=76  Identities=17%  Similarity=0.238  Sum_probs=56.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcC--------
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECD--------  150 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D--------  150 (380)
                      .+.+|+|+|+ |-+|..+++.+...|++|+++++++.+.+...+    +               +..++..+        
T Consensus       189 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~----~---------------G~~~~~~~~~~~~d~~  248 (405)
T 4dio_A          189 PAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVAS----L---------------GAKFIAVEDEEFKAAE  248 (405)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHH----T---------------TCEECCCCC-------
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH----c---------------CCceeecccccccccc
Confidence            4578999995 999999999999999999999999987665543    1               12222211        


Q ss_pred             --------CCC------hhcHHHHhcCCCEEEEccccC
Q 016901          151 --------LEK------RVQIEPALGNASVVICCIGAS  174 (380)
Q Consensus       151 --------l~d------~~~~~~a~~~~d~Vi~~Ag~~  174 (380)
                              +++      .+.+.+++.++|+||+++...
T Consensus       249 ~~~~ya~e~s~~~~~~~~~~l~e~l~~aDVVI~tvlip  286 (405)
T 4dio_A          249 TAGGYAKEMSGEYQVKQAALVAEHIAKQDIVITTALIP  286 (405)
T ss_dssp             ----------CHHHHHHHHHHHHHHHTCSEEEECCCCS
T ss_pred             cccchhhhcchhhhhhhHhHHHHHhcCCCEEEECCcCC
Confidence                    222      247888899999999997644

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=96.86  E-value=0.002  Score=58.71  Aligned_cols=70  Identities=21%  Similarity=0.283  Sum_probs=52.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      .+++|+|.| +|.+|+.++..|++.|++|++.+|+.++.+++.+.                  -++.+  .+     ++.
T Consensus       128 ~~~~v~iiG-aG~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~------------------~g~~~--~~-----~~~  181 (275)
T 2hk9_A          128 KEKSILVLG-AGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQK------------------FPLEV--VN-----SPE  181 (275)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTT------------------SCEEE--CS-----CGG
T ss_pred             CCCEEEEEC-chHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHH------------------cCCee--eh-----hHH
Confidence            568999999 59999999999999999999999998776654320                  12221  11     355


Q ss_pred             HHhcCCCEEEEccccC
Q 016901          159 PALGNASVVICCIGAS  174 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~  174 (380)
                      +++.++|+||++....
T Consensus       182 ~~~~~aDiVi~atp~~  197 (275)
T 2hk9_A          182 EVIDKVQVIVNTTSVG  197 (275)
T ss_dssp             GTGGGCSEEEECSSTT
T ss_pred             hhhcCCCEEEEeCCCC
Confidence            6678899999998754

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=96.85  E-value=0.002  Score=59.41  Aligned_cols=66  Identities=18%  Similarity=0.251  Sum_probs=45.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      .++|-+.| -|..|..+++.|+++||+|++.+|++++.+++.+                   .+...       .++..+
T Consensus         5 s~kIgfIG-LG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~-------------------~G~~~-------~~s~~e   57 (297)
T 4gbj_A            5 SEKIAFLG-LGNLGTPIAEILLEAGYELVVWNRTASKAEPLTK-------------------LGATV-------VENAID   57 (297)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEC-------CTTTT-------------------TTCEE-------CSSGGG
T ss_pred             CCcEEEEe-cHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-------------------cCCeE-------eCCHHH
Confidence            35799999 8999999999999999999999999887654321                   22222       245677


Q ss_pred             HhcCCCEEEEccc
Q 016901          160 ALGNASVVICCIG  172 (380)
Q Consensus       160 a~~~~d~Vi~~Ag  172 (380)
                      ++.++|+||-|..
T Consensus        58 ~~~~~dvvi~~l~   70 (297)
T 4gbj_A           58 AITPGGIVFSVLA   70 (297)
T ss_dssp             GCCTTCEEEECCS
T ss_pred             HHhcCCceeeecc
Confidence            8889999999875

>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}

Probab=96.85  E-value=0.0077  Score=56.04  Aligned_cols=70  Identities=13%  Similarity=0.000  Sum_probs=50.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCCch---hHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCCh
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQ---RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G-~~V~~l~R~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~  154 (380)
                      ++|+|.|.| .|.+|..++..|++.| ++|++.+|+++   +.++..+.+..               .++         .
T Consensus        23 M~m~IgvIG-~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~---------------~g~---------~   77 (317)
T 4ezb_A           23 MMTTIAFIG-FGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAE---------------LGV---------E   77 (317)
T ss_dssp             SCCEEEEEC-CSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHH---------------TTC---------E
T ss_pred             cCCeEEEEC-ccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHH---------------CCC---------C
Confidence            357899999 8999999999999999 99999999873   22222222221               122         2


Q ss_pred             h-cHHHHhcCCCEEEEcccc
Q 016901          155 V-QIEPALGNASVVICCIGA  173 (380)
Q Consensus       155 ~-~~~~a~~~~d~Vi~~Ag~  173 (380)
                      . +..++++++|+||-+...
T Consensus        78 ~~s~~e~~~~aDvVi~avp~   97 (317)
T 4ezb_A           78 PLDDVAGIACADVVLSLVVG   97 (317)
T ss_dssp             EESSGGGGGGCSEEEECCCG
T ss_pred             CCCHHHHHhcCCEEEEecCC
Confidence            2 345677889999998753

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=96.85  E-value=0.0016  Score=60.85  Aligned_cols=40  Identities=38%  Similarity=0.471  Sum_probs=35.6

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHH
Q 016901           82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLV  121 (380)
Q Consensus        82 ~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~  121 (380)
                      +|||+||+|.+|..+++.+...|++|+++++++++.+.+.
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~  191 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR  191 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence            7999999999999999998889999999999987766543

>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8

Probab=96.84  E-value=0.008  Score=48.76  Aligned_cols=88  Identities=17%  Similarity=0.208  Sum_probs=59.7

Q ss_pred             CCCCeEEEEcCC---ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCCh
Q 016901           78 KDDNLAFVAGAT---GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (380)
Q Consensus        78 ~~~~~vlVtGat---G~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~  154 (380)
                      .+.++|.|.|++   |-+|..+++.|++.|++|+.++++....                        .++       .-.
T Consensus        12 ~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~i------------------------~G~-------~~~   60 (138)
T 1y81_A           12 KEFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEI------------------------EGL-------KCY   60 (138)
T ss_dssp             --CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE------------------------TTE-------ECB
T ss_pred             cCCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCeE------------------------CCe-------eec
Confidence            356789999987   8999999999999999977766553211                        111       112


Q ss_pred             hcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEcc
Q 016901          155 VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (380)
Q Consensus       155 ~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS  212 (380)
                      .++.++.+.+|.+|-+...                .....+++.+.+.|++.++..++
T Consensus        61 ~s~~el~~~vDlvii~vp~----------------~~v~~v~~~~~~~g~~~i~~~~~  102 (138)
T 1y81_A           61 RSVRELPKDVDVIVFVVPP----------------KVGLQVAKEAVEAGFKKLWFQPG  102 (138)
T ss_dssp             SSGGGSCTTCCEEEECSCH----------------HHHHHHHHHHHHTTCCEEEECTT
T ss_pred             CCHHHhCCCCCEEEEEeCH----------------HHHHHHHHHHHHcCCCEEEEcCc
Confidence            3445555679999988642                23556677777788887766553

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=96.84  E-value=0.013  Score=54.00  Aligned_cols=43  Identities=14%  Similarity=0.040  Sum_probs=37.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQ  122 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~  122 (380)
                      .+++|.|.|+ |.+|..++..|++.|++|++++|++++.+...+
T Consensus        14 ~~~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~   56 (302)
T 1f0y_A           14 IVKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKK   56 (302)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             cCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH
Confidence            3568999995 999999999999999999999999987766543

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=96.83  E-value=0.0036  Score=59.92  Aligned_cols=41  Identities=22%  Similarity=0.237  Sum_probs=36.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL  120 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~  120 (380)
                      .+++|+|+| .|.+|..+++.+...|.+|++++|++.+.+..
T Consensus       171 ~g~~V~ViG-aG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~  211 (384)
T 1l7d_A          171 PPARVLVFG-VGVAGLQAIATAKRLGAVVMATDVRAATKEQV  211 (384)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCSTTHHHH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            578999999 59999999999999999999999998776554

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=96.83  E-value=0.0026  Score=58.96  Aligned_cols=43  Identities=35%  Similarity=0.299  Sum_probs=37.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQ  122 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~  122 (380)
                      ++++|.|.| .|.+|..+++.|++.|++|++.+|++++.+.+.+
T Consensus         8 ~~~~IgiIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~   50 (306)
T 3l6d_A            8 FEFDVSVIG-LGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVA   50 (306)
T ss_dssp             CSCSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHH
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            456899998 8999999999999999999999999988776543

>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*

Probab=96.82  E-value=0.012  Score=55.38  Aligned_cols=107  Identities=14%  Similarity=0.191  Sum_probs=73.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC-------------------chhHHHHHHHHHhhhhcccccccCC
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRS-------------------VQRAENLVQSVKQMKLDGELANKGI  138 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~  138 (380)
                      ...+|+|.| .|++|.++++.|+..|. ++++++.+                   ..+.+.+.+.+..++          
T Consensus        35 ~~~~VlivG-~GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~ln----------  103 (346)
T 1y8q_A           35 RASRVLLVG-LKGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLN----------  103 (346)
T ss_dssp             HTCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTC----------
T ss_pred             hCCeEEEEC-CCHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHC----------
Confidence            456899999 78999999999999996 77777532                   245666666666543          


Q ss_pred             CCCCceEEEEcCCCChhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCC
Q 016901          139 QPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT  215 (380)
Q Consensus       139 ~~~~~v~~~~~Dl~d~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~  215 (380)
                       +.-+++.+..++++  ...+.+.++|+||.+..               |...-..+-++|.+.++ .+|..++.|.
T Consensus       104 -p~v~v~~~~~~~~~--~~~~~~~~~dvVv~~~d---------------~~~~r~~ln~~~~~~~i-p~i~~~~~G~  161 (346)
T 1y8q_A          104 -PMVDVKVDTEDIEK--KPESFFTQFDAVCLTCC---------------SRDVIVKVDQICHKNSI-KFFTGDVFGY  161 (346)
T ss_dssp             -TTSEEEEECSCGGG--CCHHHHTTCSEEEEESC---------------CHHHHHHHHHHHHHTTC-EEEEEEEEBT
T ss_pred             -CCeEEEEEecccCc--chHHHhcCCCEEEEcCC---------------CHHHHHHHHHHHHHcCC-CEEEEeeccc
Confidence             11345566666654  34677899999998742               33444556778888775 5777766544

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=96.82  E-value=0.0018  Score=59.33  Aligned_cols=65  Identities=17%  Similarity=0.183  Sum_probs=50.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      ++|.|.| .|.+|..++..|++.|++|++.+|++++.+.+.+                   .++.+       ..+..++
T Consensus         2 ~~I~iiG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~-------------------~g~~~-------~~~~~~~   54 (287)
T 3pdu_A            2 TTYGFLG-LGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVA-------------------LGARQ-------ASSPAEV   54 (287)
T ss_dssp             CCEEEEC-CSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHH-------------------HTCEE-------CSCHHHH
T ss_pred             CeEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH-------------------CCCee-------cCCHHHH
Confidence            5799998 8999999999999999999999999988777653                   11211       2345566


Q ss_pred             hcCCCEEEEccc
Q 016901          161 LGNASVVICCIG  172 (380)
Q Consensus       161 ~~~~d~Vi~~Ag  172 (380)
                      +.++|+||.+..
T Consensus        55 ~~~advvi~~v~   66 (287)
T 3pdu_A           55 CAACDITIAMLA   66 (287)
T ss_dssp             HHHCSEEEECCS
T ss_pred             HHcCCEEEEEcC
Confidence            677888887764

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=96.81  E-value=0.0023  Score=57.58  Aligned_cols=68  Identities=18%  Similarity=0.291  Sum_probs=51.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      .+ +++|.| +|..|++++..|++.|. +|++.+|+.++.+++.                    ..+...     ..+++
T Consensus       108 ~~-~vliiG-aGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la--------------------~~~~~~-----~~~~~  160 (253)
T 3u62_A          108 KE-PVVVVG-AGGAARAVIYALLQMGVKDIWVVNRTIERAKALD--------------------FPVKIF-----SLDQL  160 (253)
T ss_dssp             CS-SEEEEC-CSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCC--------------------SSCEEE-----EGGGH
T ss_pred             CC-eEEEEC-cHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH--------------------HHcccC-----CHHHH
Confidence            45 899999 59999999999999997 8999999988765532                    122211     12456


Q ss_pred             HHHhcCCCEEEEcccc
Q 016901          158 EPALGNASVVICCIGA  173 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag~  173 (380)
                      .+++.++|+||++...
T Consensus       161 ~~~~~~aDiVInatp~  176 (253)
T 3u62_A          161 DEVVKKAKSLFNTTSV  176 (253)
T ss_dssp             HHHHHTCSEEEECSST
T ss_pred             HhhhcCCCEEEECCCC
Confidence            6778899999998753

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=96.81  E-value=0.0018  Score=61.39  Aligned_cols=75  Identities=17%  Similarity=0.170  Sum_probs=54.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      .+.+|||+|+ |.||...++.+...|.+|+++++++++.+...+   ++         |    .. .+  .|..+.+.+.
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~---~l---------G----a~-~v--i~~~~~~~~~  239 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQ---DL---------G----AD-DY--VIGSDQAKMS  239 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHT---TS---------C----CS-CE--EETTCHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHH---Hc---------C----Cc-ee--eccccHHHHH
Confidence            5679999995 999999998888889999999998877654431   11         1    11 11  2444555566


Q ss_pred             HHhcCCCEEEEcccc
Q 016901          159 PALGNASVVICCIGA  173 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~  173 (380)
                      ++.+++|+||+++|.
T Consensus       240 ~~~~g~D~vid~~g~  254 (357)
T 2cf5_A          240 ELADSLDYVIDTVPV  254 (357)
T ss_dssp             HSTTTEEEEEECCCS
T ss_pred             HhcCCCCEEEECCCC
Confidence            666789999999984

>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}

Probab=96.81  E-value=0.00051  Score=65.20  Aligned_cols=34  Identities=38%  Similarity=0.337  Sum_probs=29.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCC
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRS  113 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G-~~V~~l~R~  113 (380)
                      +++|.|.||+|++|+.+++.|++++ .+|+++.++
T Consensus         8 ~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s   42 (354)
T 1ys4_A            8 KIKVGVLGATGSVGQRFVQLLADHPMFELTALAAS   42 (354)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEEC
T ss_pred             cceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcc
Confidence            4689999999999999999998875 688888754

>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*

Probab=96.80  E-value=0.0013  Score=61.78  Aligned_cols=93  Identities=15%  Similarity=0.169  Sum_probs=58.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCC---CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLG---FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G---~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      +++|.|.||||++|+.+++.|++++   .+|+++....+.-..       +.+.      +    ..+.+  .|+ |++ 
T Consensus         3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~-------~~~~------~----~~i~~--~~~-~~~-   61 (336)
T 2r00_A            3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKT-------YRFN------G----KTVRV--QNV-EEF-   61 (336)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCE-------EEET------T----EEEEE--EEG-GGC-
T ss_pred             ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCc-------eeec------C----ceeEE--ecC-ChH-
Confidence            5789999999999999999999984   467777632111000       0000      0    12222  222 122 


Q ss_pred             HHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccC
Q 016901          157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL  213 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~  213 (380)
                         .+.++|+||.|.|..                .+...+..+.+.|+ ++|-.|+.
T Consensus        62 ---~~~~vDvVf~a~g~~----------------~s~~~a~~~~~~G~-~vId~s~~   98 (336)
T 2r00_A           62 ---DWSQVHIALFSAGGE----------------LSAKWAPIAAEAGV-VVIDNTSH   98 (336)
T ss_dssp             ---CGGGCSEEEECSCHH----------------HHHHHHHHHHHTTC-EEEECSST
T ss_pred             ---HhcCCCEEEECCCch----------------HHHHHHHHHHHcCC-EEEEcCCc
Confidence               346899999998742                25556677777887 57777775

>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2

Probab=96.80  E-value=0.0081  Score=59.03  Aligned_cols=119  Identities=13%  Similarity=0.054  Sum_probs=76.3

Q ss_pred             CCeEEEEcCCC-hHHHHHHHHHHHC----CCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCCh
Q 016901           80 DNLAFVAGATG-KVGSRTVRELLKL----GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (380)
Q Consensus        80 ~~~vlVtGatG-~iG~~lv~~Ll~~----G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~  154 (380)
                      +++|.|.||.+ +.|.+++..|++.    |++|++.++++++++........+.-.     ..  ...++..       .
T Consensus         3 ~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~~~~~~~~~l~~-----~~--~~~~I~~-------t   68 (480)
T 1obb_A            3 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEE-----VG--ADLKFEK-------T   68 (480)
T ss_dssp             CCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHH-----TT--CCCEEEE-------E
T ss_pred             CCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHHHHHHHHHHhcc-----CC--CCcEEEE-------E
Confidence            56899999766 5688888888754    789999999998877655544332100     00  0122222       1


Q ss_pred             hcHHHHhcCCCEEEEccccCcc-------------cc----CC---C------CCcchhhHHHHHHHHHHHHHcCCCEEE
Q 016901          155 VQIEPALGNASVVICCIGASEK-------------EV----FD---I------TGPYRIDFQATKNLVDAATIAKVNHFI  208 (380)
Q Consensus       155 ~~~~~a~~~~d~Vi~~Ag~~~~-------------~~----~~---~------~~~~~~nv~g~~~ll~a~~~~~v~r~V  208 (380)
                      .++.++++++|+||.+++....             ..    .+   +      -....-|+.....+++.+++.+..-++
T Consensus        69 tD~~eal~dAD~VIiaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~~~P~A~i  148 (480)
T 1obb_A           69 MNLDDVIIDADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWY  148 (480)
T ss_dssp             SCHHHHHTTCSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred             CCHHHHhCCCCEEEECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHHHCCCeEE
Confidence            3466788999999999974210             00    00   0      011345778888899999888766666


Q ss_pred             EEcc
Q 016901          209 MVSS  212 (380)
Q Consensus       209 ~~SS  212 (380)
                      ...|
T Consensus       149 i~~T  152 (480)
T 1obb_A          149 LQAA  152 (480)
T ss_dssp             EECS
T ss_pred             EEeC
Confidence            5555

>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*

Probab=96.80  E-value=0.0028  Score=59.01  Aligned_cols=115  Identities=13%  Similarity=0.176  Sum_probs=66.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhh----hhcccccccCCCCCCceEEEEcCCCCh
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQM----KLDGELANKGIQPVEMLELVECDLEKR  154 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~v~~~~~Dl~d~  154 (380)
                      ...+|.|.| +|.+|+.++..++.+|++|++++.+++......+.+++.    .-.+..     ......+-....++..
T Consensus         5 ~~~~VaViG-aG~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~-----~~~~~~~~~l~~i~~~   78 (319)
T 3ado_A            5 AAGDVLIVG-SGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSL-----KGSLSAEEQLSLISSC   78 (319)
T ss_dssp             --CEEEEEC-CSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCC-----CSSSCHHHHHHTEEEE
T ss_pred             CCCeEEEEC-CcHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCC-----CCccCHHHHHhhcccc
Confidence            446899999 699999999999999999999999988765554444321    111100     0000000000011112


Q ss_pred             hcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccC
Q 016901          155 VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL  213 (380)
Q Consensus       155 ~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~  213 (380)
                      .++.++++++|.||=++--              |+.-=+.++....+.-...-|+.|+.
T Consensus        79 ~~l~~a~~~ad~ViEav~E--------------~l~iK~~lf~~l~~~~~~~aIlaSNT  123 (319)
T 3ado_A           79 TNLAEAVEGVVHIQECVPE--------------NLDLKRKIFAQLDSIVDDRVVLSSSS  123 (319)
T ss_dssp             CCHHHHTTTEEEEEECCCS--------------CHHHHHHHHHHHHTTCCSSSEEEECC
T ss_pred             cchHhHhccCcEEeecccc--------------HHHHHHHHHHHHHHHhhhcceeehhh
Confidence            4577889999999987521              33444556665554433344445544

>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}

Probab=96.80  E-value=0.0025  Score=58.57  Aligned_cols=67  Identities=15%  Similarity=0.090  Sum_probs=50.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ++|+|.|.| .|.+|..++..|++.|++|++.+|++++.+.+.+                   .++..       ..++.
T Consensus         3 ~~~~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~-------------------~g~~~-------~~~~~   55 (301)
T 3cky_A            3 KSIKIGFIG-LGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVA-------------------QGAQA-------CENNQ   55 (301)
T ss_dssp             -CCEEEEEC-CCTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHT-------------------TTCEE-------CSSHH
T ss_pred             CCCEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-------------------CCCee-------cCCHH
Confidence            347899999 7999999999999999999999999887665432                   12221       13355


Q ss_pred             HHhcCCCEEEEccc
Q 016901          159 PALGNASVVICCIG  172 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag  172 (380)
                      +++.++|+||.+..
T Consensus        56 ~~~~~~D~vi~~vp   69 (301)
T 3cky_A           56 KVAAASDIIFTSLP   69 (301)
T ss_dssp             HHHHHCSEEEECCS
T ss_pred             HHHhCCCEEEEECC
Confidence            66778999998874

>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A

Probab=96.79  E-value=0.012  Score=59.54  Aligned_cols=107  Identities=16%  Similarity=0.169  Sum_probs=72.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCc-------------------hhHHHHHHHHHhhhhcccccccCC
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKGI  138 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~  138 (380)
                      ...+|+|.| .|++|.++++.|+..|. ++++++.+.                   .+...+.+.+..++          
T Consensus        16 ~~s~VlVVG-aGGLGsevak~La~aGVG~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~~L~~iN----------   84 (640)
T 1y8q_B           16 AGGRVLVVG-AGGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQFY----------   84 (640)
T ss_dssp             HHCEEEEEC-CSHHHHHHHHHHHHHTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHTTC----------
T ss_pred             hcCeEEEEC-cCHHHHHHHHHHHHcCCCeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHHHHHHHHC----------
Confidence            346899999 69999999999999996 788887643                   23444444444432          


Q ss_pred             CCCCceEEEEcCCCChhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccC
Q 016901          139 QPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL  213 (380)
Q Consensus       139 ~~~~~v~~~~~Dl~d~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~  213 (380)
                       +.-+++.+..++++.....+.+.++|+||.+..               |+..-..+-++|...++. +|+.++.
T Consensus        85 -P~v~V~a~~~~i~~~~~~~~~~~~~DlVvda~D---------------n~~aR~~ln~~c~~~~iP-lI~~g~~  142 (640)
T 1y8q_B           85 -PKANIVAYHDSIMNPDYNVEFFRQFILVMNALD---------------NRAARNHVNRMCLAADVP-LIESGTA  142 (640)
T ss_dssp             -TTCEEEEEESCTTSTTSCHHHHTTCSEEEECCS---------------CHHHHHHHHHHHHHHTCC-EEEEEEE
T ss_pred             -CCCeEEEEecccchhhhhHhhhcCCCEEEECCC---------------CHHHHHHHHHHHHHcCCC-EEEEEEe
Confidence             124567777888654433567899999999853               344445566777777753 5555543

>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*

Probab=96.78  E-value=0.0044  Score=57.28  Aligned_cols=43  Identities=21%  Similarity=0.256  Sum_probs=38.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQ  122 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~  122 (380)
                      .+++|-+.| -|..|..+++.|+++||+|++.+|++++.+.+.+
T Consensus         2 ~M~kIgfIG-lG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~   44 (300)
T 3obb_A            2 HMKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVA   44 (300)
T ss_dssp             -CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHH
T ss_pred             CcCEEEEee-ehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHH
Confidence            357899999 9999999999999999999999999998877654

>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A

Probab=96.77  E-value=0.0026  Score=57.18  Aligned_cols=68  Identities=16%  Similarity=0.233  Sum_probs=51.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ++|+|.|.| +|.+|..++..|.+.|++|.+.+|++++.+.+.+..                  ++.       -..++.
T Consensus         2 ~~m~i~iiG-~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~------------------g~~-------~~~~~~   55 (259)
T 2ahr_A            2 NAMKIGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL------------------ALP-------YAMSHQ   55 (259)
T ss_dssp             -CCEEEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH------------------TCC-------BCSSHH
T ss_pred             CccEEEEEC-CCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHc------------------CCE-------eeCCHH
Confidence            346899999 899999999999999999999999988776654311                  111       123356


Q ss_pred             HHhcCCCEEEEccc
Q 016901          159 PALGNASVVICCIG  172 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag  172 (380)
                      +++.++|+||.+..
T Consensus        56 ~~~~~~D~Vi~~v~   69 (259)
T 2ahr_A           56 DLIDQVDLVILGIK   69 (259)
T ss_dssp             HHHHTCSEEEECSC
T ss_pred             HHHhcCCEEEEEeC
Confidence            67778999999875

>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*

Probab=96.76  E-value=0.0023  Score=61.74  Aligned_cols=39  Identities=21%  Similarity=0.023  Sum_probs=34.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLV  121 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~  121 (380)
                      |+|.|.| .|++|..++..|++ |++|++++|++++.+.+.
T Consensus         1 MkI~VIG-~G~vG~~~A~~La~-G~~V~~~d~~~~~~~~l~   39 (402)
T 1dlj_A            1 MKIAVAG-SGYVGLSLGVLLSL-QNEVTIVDILPSKVDKIN   39 (402)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHTT-TSEEEEECSCHHHHHHHH
T ss_pred             CEEEEEC-CCHHHHHHHHHHhC-CCEEEEEECCHHHHHHHH
Confidence            4799998 59999999999999 999999999988777654

>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}

Probab=96.75  E-value=0.0046  Score=58.89  Aligned_cols=69  Identities=19%  Similarity=0.157  Sum_probs=52.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      |++|+|+|+ |.+|+.+++.|.+.|++|++++.++......                    ... .++..|..|.+.+.+
T Consensus         1 M~~Ililg~-g~~g~~~~~a~~~~G~~v~~~~~~~~~~~~~--------------------~~~-~~~~~~~~d~~~l~~   58 (380)
T 3ax6_A            1 MKKIGIIGG-GQLGKMMTLEAKKMGFYVIVLDPTPRSPAGQ--------------------VAD-EQIVAGFFDSERIED   58 (380)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCTTGG--------------------GSS-EEEECCTTCHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchhh--------------------hCc-eEEECCCCCHHHHHH
Confidence            368999995 8999999999999999999998764321000                    011 356789999998888


Q ss_pred             HhcCCCEEEEc
Q 016901          160 ALGNASVVICC  170 (380)
Q Consensus       160 a~~~~d~Vi~~  170 (380)
                      ++.++|.|+..
T Consensus        59 ~~~~~d~v~~~   69 (380)
T 3ax6_A           59 LVKGSDVTTYD   69 (380)
T ss_dssp             HHHTCSEEEES
T ss_pred             HHhcCCEEEec
Confidence            88899998863

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=96.75  E-value=0.0036  Score=59.36  Aligned_cols=96  Identities=14%  Similarity=0.137  Sum_probs=63.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh---
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV---  155 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~---  155 (380)
                      .+.+|||+| +|.+|...++.+...|++|+++++++++.+...+    ++             . -.++  | .+.+   
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----lG-------------a-~~vi--~-~~~~~~~  246 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRAFA----LG-------------A-DHGI--N-RLEEDWV  246 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HT-------------C-SEEE--E-TTTSCHH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHH----cC-------------C-CEEE--c-CCcccHH
Confidence            568999999 8999999999988899999999999877665432    21             1 1122  3 2222   


Q ss_pred             -cHHHHhc--CCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCC
Q 016901          156 -QIEPALG--NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (380)
Q Consensus       156 -~~~~a~~--~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~  214 (380)
                       .+.++..  ++|+||+++|..                .....++.++..  +++|.++...
T Consensus       247 ~~v~~~~~g~g~D~vid~~g~~----------------~~~~~~~~l~~~--G~iv~~G~~~  290 (363)
T 3uog_A          247 ERVYALTGDRGADHILEIAGGA----------------GLGQSLKAVAPD--GRISVIGVLE  290 (363)
T ss_dssp             HHHHHHHTTCCEEEEEEETTSS----------------CHHHHHHHEEEE--EEEEEECCCS
T ss_pred             HHHHHHhCCCCceEEEECCChH----------------HHHHHHHHhhcC--CEEEEEecCC
Confidence             3333333  699999999831                022344444443  4788887644

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=96.74  E-value=0.0029  Score=59.90  Aligned_cols=38  Identities=18%  Similarity=0.160  Sum_probs=33.8

Q ss_pred             CC-CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchh
Q 016901           79 DD-NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR  116 (380)
Q Consensus        79 ~~-~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~  116 (380)
                      .+ .+|||+||+|.+|..+++.+...|++|++++++.++
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~  204 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPN  204 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTT
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccc
Confidence            46 899999999999999998888889999999987765

>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A

Probab=96.74  E-value=0.0079  Score=55.60  Aligned_cols=110  Identities=15%  Similarity=0.121  Sum_probs=66.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~--~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .+++|.|+|| |.+|..++..|+.+|.  +|++++.+++......+.. .+.            .+++.. ..      +
T Consensus        13 ~~~kV~ViGa-G~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~-~~~------------~~~i~~-t~------d   71 (303)
T 2i6t_A           13 TVNKITVVGG-GELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLE-IFN------------LPNVEI-SK------D   71 (303)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHH-HHT------------CTTEEE-ES------C
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHh-hhc------------CCCeEE-eC------C
Confidence            4478999995 9999999999999998  8999999875211221111 110            024443 12      2


Q ss_pred             HHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEE-EEEc
Q 016901          157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHF-IMVS  211 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~-V~~S  211 (380)
                      + ++++++|+||.++|... ...........|+.-.+.+++.+.+....-+ +.+|
T Consensus        72 ~-~~l~~aD~Vi~aag~~~-pG~tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~s  125 (303)
T 2i6t_A           72 L-SASAHSKVVIFTVNSLG-SSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVAS  125 (303)
T ss_dssp             G-GGGTTCSEEEECCCC-----CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECS
T ss_pred             H-HHHCCCCEEEEcCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcC
Confidence            4 56889999999998642 1111112245577777888888877654434 4444

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=96.74  E-value=0.0025  Score=56.99  Aligned_cols=38  Identities=32%  Similarity=0.386  Sum_probs=33.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchh
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR  116 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~  116 (380)
                      ..+++|.|.| +|.+|..++..|++.|++|++.+|++++
T Consensus        17 ~~~~kIgiIG-~G~mG~alA~~L~~~G~~V~~~~r~~~~   54 (245)
T 3dtt_A           17 FQGMKIAVLG-TGTVGRTMAGALADLGHEVTIGTRDPKA   54 (245)
T ss_dssp             --CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred             cCCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCChhh
Confidence            3668999998 9999999999999999999999999876

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=96.74  E-value=0.0035  Score=59.30  Aligned_cols=74  Identities=15%  Similarity=0.136  Sum_probs=52.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCCh--h
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR--V  155 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~-G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~--~  155 (380)
                      .+.+|||+|| |.+|...++.+... |.+|+++++++++.+.+.+    ++               ... ..|..+.  +
T Consensus       186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~----lG---------------a~~-vi~~~~~~~~  244 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAER----LG---------------ADH-VVDARRDPVK  244 (359)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHH----TT---------------CSE-EEETTSCHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH----hC---------------CCE-EEeccchHHH
Confidence            5679999999 99999999888888 9999999999877665432    21               111 1244443  3


Q ss_pred             cHHHHhc--CCCEEEEcccc
Q 016901          156 QIEPALG--NASVVICCIGA  173 (380)
Q Consensus       156 ~~~~a~~--~~d~Vi~~Ag~  173 (380)
                      .+.++-.  ++|+||+++|.
T Consensus       245 ~v~~~~~g~g~Dvvid~~G~  264 (359)
T 1h2b_A          245 QVMELTRGRGVNVAMDFVGS  264 (359)
T ss_dssp             HHHHHTTTCCEEEEEESSCC
T ss_pred             HHHHHhCCCCCcEEEECCCC
Confidence            3334332  69999999974

>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A

Probab=96.72  E-value=0.002  Score=60.52  Aligned_cols=102  Identities=18%  Similarity=0.129  Sum_probs=59.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCCc---hhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSV---QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~-G~~V~~l~R~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~  155 (380)
                      |++|.|.||||++|..+++.|.++ .+++..+..+.   +.-+.+.+....+.        +   ...+.+...  .+  
T Consensus         4 M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~--------~---~~~~~v~~~--~~--   68 (337)
T 3dr3_A            4 MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLK--------G---IVELPLQPM--SD--   68 (337)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGT--------T---TCCCBEEEE--SS--
T ss_pred             ceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCcccc--------C---ccceeEecc--CC--
Confidence            468999999999999999999986 46887776543   22111111111000        0   011222111  01  


Q ss_pred             cHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCC
Q 016901          156 QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (380)
Q Consensus       156 ~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~  214 (380)
                       .++++.++|+||.|.+..                .+..++..+.+.|+ ++|=.|+..
T Consensus        69 -~~~~~~~~Dvvf~a~p~~----------------~s~~~~~~~~~~g~-~vIDlSa~f  109 (337)
T 3dr3_A           69 -ISEFSPGVDVVFLATAHE----------------VSHDLAPQFLEAGC-VVFDLSGAF  109 (337)
T ss_dssp             -GGGTCTTCSEEEECSCHH----------------HHHHHHHHHHHTTC-EEEECSSTT
T ss_pred             -HHHHhcCCCEEEECCChH----------------HHHHHHHHHHHCCC-EEEEcCCcc
Confidence             223337899999987632                24556666677786 577777743

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=96.72  E-value=0.0032  Score=59.50  Aligned_cols=95  Identities=15%  Similarity=0.101  Sum_probs=61.8

Q ss_pred             CeEEEEcCCChHHHHH-HHHH-HHCCCe-EEEEeCCch---hHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCCh
Q 016901           81 NLAFVAGATGKVGSRT-VREL-LKLGFR-VRAGVRSVQ---RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (380)
Q Consensus        81 ~~vlVtGatG~iG~~l-v~~L-l~~G~~-V~~l~R~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~  154 (380)
                      .+|||+|| |.+|... ++.+ ...|.+ |++++++++   +.+.+.+                   -+...+  |..+.
T Consensus       174 ~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~-------------------lGa~~v--~~~~~  231 (357)
T 2b5w_A          174 SSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEE-------------------LDATYV--DSRQT  231 (357)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHH-------------------TTCEEE--ETTTS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHH-------------------cCCccc--CCCcc
Confidence            79999999 9999999 8776 667987 999999887   6655432                   123333  55432


Q ss_pred             h--cHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCC
Q 016901          155 V--QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (380)
Q Consensus       155 ~--~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~  214 (380)
                      +  ++.++-+++|+||+++|...               .....++.++..  +++|.++...
T Consensus       232 ~~~~i~~~~gg~Dvvid~~g~~~---------------~~~~~~~~l~~~--G~iv~~g~~~  276 (357)
T 2b5w_A          232 PVEDVPDVYEQMDFIYEATGFPK---------------HAIQSVQALAPN--GVGALLGVPS  276 (357)
T ss_dssp             CGGGHHHHSCCEEEEEECSCCHH---------------HHHHHHHHEEEE--EEEEECCCCC
T ss_pred             CHHHHHHhCCCCCEEEECCCChH---------------HHHHHHHHHhcC--CEEEEEeCCC
Confidence            1  14444136999999987421               123344444443  4788887644

>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*

Probab=96.71  E-value=0.005  Score=60.69  Aligned_cols=43  Identities=21%  Similarity=0.137  Sum_probs=38.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQ  122 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~  122 (380)
                      ..|+|.|.| +|++|..++..|++.|++|++++|++++.+.+.+
T Consensus         7 ~~~~I~VIG-~G~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~   49 (478)
T 2y0c_A            7 GSMNLTIIG-SGSVGLVTGACLADIGHDVFCLDVDQAKIDILNN   49 (478)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHT
T ss_pred             CCceEEEEC-cCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHC
Confidence            357899998 9999999999999999999999999988776643

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=96.71  E-value=0.0041  Score=59.90  Aligned_cols=41  Identities=24%  Similarity=0.219  Sum_probs=36.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL  120 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~  120 (380)
                      .+++|+|+| .|.+|..+++.+...|.+|++++|++.+.+..
T Consensus       171 ~g~~V~ViG-aG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~  211 (401)
T 1x13_A          171 PPAKVMVIG-AGVAGLAAIGAANSLGAIVRAFDTRPEVKEQV  211 (401)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            467999999 59999999999999999999999998876654

>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}

Probab=96.70  E-value=0.005  Score=57.08  Aligned_cols=66  Identities=24%  Similarity=0.384  Sum_probs=50.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      .++|.|.| .|.+|..++..|++.|++|++.+|++++.+.+.+                   .++..       ..+..+
T Consensus        30 ~~~I~iIG-~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~-------------------~g~~~-------~~~~~~   82 (316)
T 2uyy_A           30 DKKIGFLG-LGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQ-------------------EGARL-------GRTPAE   82 (316)
T ss_dssp             SSCEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHH-------------------TTCEE-------CSCHHH
T ss_pred             CCeEEEEc-ccHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH-------------------cCCEE-------cCCHHH
Confidence            47899999 7999999999999999999999999887766543                   12221       123456


Q ss_pred             HhcCCCEEEEccc
Q 016901          160 ALGNASVVICCIG  172 (380)
Q Consensus       160 a~~~~d~Vi~~Ag  172 (380)
                      ++.++|+||.+..
T Consensus        83 ~~~~~DvVi~av~   95 (316)
T 2uyy_A           83 VVSTCDITFACVS   95 (316)
T ss_dssp             HHHHCSEEEECCS
T ss_pred             HHhcCCEEEEeCC
Confidence            6677899888875

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	380
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	4e-16
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	5e-12
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	3e-10
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	1e-09
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	6e-09
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	8e-09
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	2e-08
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	3e-08
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	4e-08
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	4e-08
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	1e-06
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	2e-06
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	2e-06
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	5e-06
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	8e-06
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	3e-05
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	5e-05
d1i24a_	393	c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1	4e-04
d2a35a1	212	c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse	6e-04
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	7e-04
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	0.001
d1ek6a_	346	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	0.001
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	0.002
d2bkaa1	232	c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H	0.002
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	0.003
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	0.004
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	0.004

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.3 bits (181), Expect = 4e-16
 Identities = 34/211 (16%), Positives = 67/211 (31%), Gaps = 32/211 (15%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
            + GATG+ G  T+ + ++ G+ V   VR   R  +       +                
Sbjct: 7   AIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVV--------------- 51

Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
                 D+ +   ++  +     VI  +G           P  +  +  +N+V A     
Sbjct: 52  ----VGDVLQAADVDKTVAGQDAVIVLLGTRNDL-----SPTTVMSEGARNIVAAMKAHG 102

Query: 204 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGG-MERPTD 262
           V+  +  +S        P  +      V     +  + L  SGL Y  V P    ++P  
Sbjct: 103 VDKVVACTS--AFLLWDPTKVPPRLQAVTDDHIRMHKVLRESGLKYVAVMPPHIGDQPL- 159

Query: 263 AYKETHNITLSQEDTLFGGQVSNLQVAELLA 293
               T   T++ +       +S   +   + 
Sbjct: 160 ----TGAYTVTLDGRGPSRVISKHDLGHFML 186

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 63.6 bits (153), Expect = 5e-12
 Identities = 39/288 (13%), Positives = 76/288 (26%), Gaps = 31/288 (10%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
            + G TG +G R V   + LG       R       +V ++ ++++       G      
Sbjct: 7   LIVGGTGYIGKRIVNASISLGHPTYVLFRP-----EVVSNIDKVQMLLYFKQLGA----- 56

Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
            +L+E  L+   ++                         G           LV+A   A 
Sbjct: 57  -KLIEASLDDHQRLVD---------ALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAG 106

Query: 204 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPG---GMERP 260
                + S             L       + KRK   A+ A+ +PYT V      G    
Sbjct: 107 NIKRFLPSE-FGMDPDIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAGYFAG 165

Query: 261 TDAYKETHNITLSQEDTLFGGQVSNLQ------VAELLACMAKNRSLSYCKVVEVIAETT 314
           + A  + H +    +  ++G             V         +       +        
Sbjct: 166 SLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNI 225

Query: 315 APLTPMEELLAKIPSQRAEPKESIAPEKSDPAASKSMISEESSAPITE 362
                + ++  ++  Q    K  I+ +            E+       
Sbjct: 226 LSQKEVIQIWERLSEQNL-DKIYISSQDFLADMKDKSYEEKIVRCHLY 272

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 58.5 bits (140), Expect = 3e-10
 Identities = 49/282 (17%), Positives = 88/282 (31%), Gaps = 45/282 (15%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
            V GATG+ G+  +R    +G  VRA V S++                    + +Q +  
Sbjct: 7   AVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGL----------------IAEELQAIPN 50

Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
           + L +  L   V +   L   + +      S+            +    K+L DAA  A 
Sbjct: 51  VTLFQGPLLNNVPLMDTLFEGAHLAFINTTSQ---------AGDEIAIGKDLADAAKRAG 101

Query: 204 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDA 263
                + SS+  +    P   + ++      K   E  +   GLP T V  G        
Sbjct: 102 TIQHYIYSSMPDHSLYGPWPAVPMWA----PKFTVENYVRQLGLPSTFVYAGIY------ 151

Query: 264 YKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEEL 323
               +N   S    LF  ++      E  A    +  L +      +           ++
Sbjct: 152 ----NNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALL------QI 201

Query: 324 LAKIPSQRAEPKESIAPEKSDPAASKSMISEESSAPITEEPV 365
               P +    + ++  E   P    +  S   +  +T   V
Sbjct: 202 FKDGPQKWNGHRIALTFETLSPVQVCAAFSRALNRRVTYVQV 243

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 56.7 bits (135), Expect = 1e-09
 Identities = 52/323 (16%), Positives = 92/323 (28%), Gaps = 59/323 (18%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
            + GATG +G    +  L LG      VR    + N  ++    +L       G      
Sbjct: 7   LLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKA----QLLESFKASGA----- 57

Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
             +V   ++    +  A+ N  VVI  +G              +  ++  N++ A     
Sbjct: 58  -NIVHGSIDDHASLVEAVKNVDVVISTVG-------------SLQIESQVNIIKAIKEVG 103

Query: 204 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGG------- 256
                  S  G +        +     V   K K   A+ A G+PYT V           
Sbjct: 104 TVKRFFPSEFGNDV--DNVHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCFAGYFLR 161

Query: 257 -MERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKN--------------RSL 301
            + +          + +  +       V    +         +               +L
Sbjct: 162 SLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTL 221

Query: 302 SYCKVVEVIAETT-----APLTPMEELLAKIPSQRAEPKESIAPEKSDPAASKSMISEES 356
           S  ++V +  +           P EE+L  I        ++  P     A S S+  +  
Sbjct: 222 SLNELVALWEKKIDKTLEKAYVPEEEVLKLI-------ADTPFPANISIAISHSIFVKGD 274

Query: 357 SAPITEEPVQTKAKVTDPLSPYT 379
                  P   +A    P   YT
Sbjct: 275 QTNFEIGPAGVEASQLYPDVKYT 297

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score = 54.4 bits (130), Expect = 6e-09
 Identities = 29/183 (15%), Positives = 55/183 (30%), Gaps = 18/183 (9%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
            V G  G +GS  VR+LL   +        +   ++L  +  +  L    A+  +     
Sbjct: 4   LVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVL-DSLTYAGNRANLAPVDADPRL----- 57

Query: 144 LELVECDLEKRVQIEPALGNASVVICC--IGASEKEVFDITGPYRIDFQATKNLVDAATI 201
              V  D+     +   L     ++        ++ +   +     + Q T+ L+  A  
Sbjct: 58  -RFVHGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVD 116

Query: 202 AKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLW-----KRKAEEALIA----SGLPYTIV 252
           A V   + VS+          +                K  ++    A     GL   I 
Sbjct: 117 AGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVRIT 176

Query: 253 RPG 255
           R  
Sbjct: 177 RCC 179

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 53.7 bits (127), Expect = 8e-09
 Identities = 60/254 (23%), Positives = 102/254 (40%), Gaps = 18/254 (7%)

Query: 84  FVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPV 141
            V GA+G+ G    ++L +    F  +  VRS Q  E +         D   A+      
Sbjct: 7   LVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAF 66

Query: 142 EMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATI 201
           + ++ +        +++P                    D   P ++D+   KN +DAA +
Sbjct: 67  QGIDALVILTSAVPKMKPGFDPTKGGRPEF-----IFEDGQYPEQVDWIGQKNQIDAAKV 121

Query: 202 AKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPT 261
           A V H ++V S+G      P   L     +L+WKRKAE+ L  SG PYTI+R GG+    
Sbjct: 122 AGVKHIVVVGSMGGTNPDHPLNKLGNGN-ILVWKRKAEQYLADSGTPYTIIRAGGL---L 177

Query: 262 DAYKETHNITLSQEDTLF---GGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLT 318
           D       + + ++D L       V    VAE+          +  K  ++ ++     T
Sbjct: 178 DKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEE-AKNKAFDLGSKPEGTST 236

Query: 319 P---MEELLAKIPS 329
           P    + L +++ S
Sbjct: 237 PTKDFKALFSQVTS 250

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.7 bits (126), Expect = 2e-08
 Identities = 29/208 (13%), Positives = 57/208 (27%), Gaps = 42/208 (20%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVR-SVQRAENLVQSVKQMKLDGELANKGIQPVE 142
            + G  G VGS    +L+  G  V         R  N+   +     +            
Sbjct: 5   LITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFE------------ 52

Query: 143 MLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFD-ITGP---YRIDFQATKNLVDA 198
              L+  D+ + + IE        +     AS     + +  P    + +   T N++  
Sbjct: 53  ---LINHDVVEPLYIEV-----DQIYHL--ASPASPPNYMYNPIKTLKTNTIGTLNMLGL 102

Query: 199 ATIAKVNHFIMVSS----------LGTNKFGFPAAILNLFWGVLLWKRKAEEALIA---- 244
           A        ++ S+            +  +      +         KR AE    A    
Sbjct: 103 AKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQ 161

Query: 245 SGLPYTIVRPGGMERPTDAYKETHNITL 272
            G+   + R      P     +   ++ 
Sbjct: 162 EGVEVRVARIFNTFGPRMHMNDGRVVSN 189

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 52.4 bits (125), Expect = 3e-08
 Identities = 33/211 (15%), Positives = 53/211 (25%), Gaps = 44/211 (20%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
            + G  G +GS  VR ++K        +        L  +     L     +        
Sbjct: 4   LITGGAGFIGSAVVRHIIKNTQDTVVNID------KLTYAGNLESLSDISESNRY----- 52

Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFD-ITGP---YRIDFQATKNLVDAA 199
                 D+    +I               A+E  V   ITGP      +   T  L++ A
Sbjct: 53  -NFEHADICDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVA 111

Query: 200 -------TIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLW-----------------K 235
                     K N+F          +G       +   V L                  K
Sbjct: 112 RKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASK 171

Query: 236 RKAEEALIA----SGLPYTIVRPGGMERPTD 262
             ++  + A     GLP  +        P  
Sbjct: 172 ASSDHLVRAWRRTYGLPTIVTNCSNNYGPYH 202

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 52.1 bits (123), Expect = 4e-08
 Identities = 30/139 (21%), Positives = 45/139 (32%), Gaps = 13/139 (9%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
            V GA G V S  V +LL+ G++VR   RS  +  NL +                     
Sbjct: 15  LVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPG-----------RF 63

Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAA-TIA 202
              V  D+ K+   +  +  A+ V                        T N + AA    
Sbjct: 64  ETAVVEDMLKQGAYDEVIKGAAGVAHIASVVSFSNKYDE-VVTPAIGGTLNALRAAAATP 122

Query: 203 KVNHFIMVSSLGTNKFGFP 221
            V  F++ SS  +     P
Sbjct: 123 SVKRFVLTSSTVSALIPKP 141

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 52.1 bits (124), Expect = 4e-08
 Identities = 33/197 (16%), Positives = 52/197 (26%), Gaps = 30/197 (15%)

Query: 83  AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVE 142
           A + G TG+ GS     LL+ G+ V    R         + V  +  D    N       
Sbjct: 4   ALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFN--TERVDHIYQDPHTCNPKF---- 57

Query: 143 MLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFD-ITGP---YRIDFQATKNLVDA 198
              L   DL     +   L            +   V      P     +D   T  L++A
Sbjct: 58  --HLHYGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEA 115

Query: 199 ATIAKVNH---FIMVSS---LGTNKFG-----FPAAILNLFWGVLLWKRKAEEALIA--- 244
                +     F   S+    G  +        P    + +    + K  A    +    
Sbjct: 116 IRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYA---VAKLYAYWITVNYRE 172

Query: 245 -SGLPYTIVRPGGMERP 260
             G+          E P
Sbjct: 173 SYGMYACNGILFNHESP 189

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.3 bits (111), Expect = 1e-06
 Identities = 35/199 (17%), Positives = 59/199 (29%), Gaps = 29/199 (14%)

Query: 81  NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQP 140
           N+A + G TG+ GS     LL+ G+ V   VR          S    +++    N     
Sbjct: 2   NVALITGITGQDGSYLAEFLLEKGYEVHGIVR-------RSSSFNTGRIEHLYKNPQAHI 54

Query: 141 VEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEV----FDITGPYRIDFQATKNLV 196
              ++L   DL     +   +            ++  V            +D   T  L+
Sbjct: 55  EGNMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLL 114

Query: 197 DAATIAKVNH---FIMVSS---LGTNKFG-----FPAAILNLFWGVLLWKRKAEEALI-- 243
           DA     + +   F   S+    G  +        P    + + G    K  A   ++  
Sbjct: 115 DAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPY-GA--AKLYAYWIVVNF 171

Query: 244 --ASGLPYTIVRPGGMERP 260
             A  L          E P
Sbjct: 172 REAYNLFAVNGILFNHESP 190

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 47.3 bits (111), Expect = 2e-06
 Identities = 28/184 (15%), Positives = 59/184 (32%), Gaps = 23/184 (12%)

Query: 85  VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML 144
           + G  G +GS  +  LLKL  +V          +  +  V+ +  + + +N         
Sbjct: 21  ITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSN--------F 72

Query: 145 ELVECDLE--KRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA 202
           + ++ D+          A  +  +    +G+  + + D       +     N++ AA  A
Sbjct: 73  KFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDA 132

Query: 203 KVNHFIMVSSLGTNKFGFPAAI-------LNLFWGVLLWKRKAEEALIA----SGLPYTI 251
           KV  F   +S  ++ +G    +               + K   E          G     
Sbjct: 133 KVQSFTYAAS--SSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYGFSTIG 190

Query: 252 VRPG 255
           +R  
Sbjct: 191 LRYF 194

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 46.9 bits (110), Expect = 2e-06
 Identities = 29/132 (21%), Positives = 47/132 (35%), Gaps = 16/132 (12%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
            V G +G +GS T  +LL+ G  V           +++  ++       L  K       
Sbjct: 4   LVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIE------RLGGKHP----- 52

Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEV-FDITGP---YRIDFQATKNLVDAA 199
              VE D+     +   L + ++      A  K V   +  P   Y  +   T  L+ A 
Sbjct: 53  -TFVEGDIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAM 111

Query: 200 TIAKVNHFIMVS 211
             A V +FI  S
Sbjct: 112 RAANVKNFIFSS 123

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 45.6 bits (107), Expect = 5e-06
 Identities = 31/195 (15%), Positives = 52/195 (26%), Gaps = 42/195 (21%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
           F+AG  G VGS   R+L + G                       + +  L +       +
Sbjct: 6   FIAGHRGMVGSAIRRQLEQRGDVELVLRT---------------RDELNLLDSR----AV 46

Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
            +    +   +V +             +G               +     N++ AA    
Sbjct: 47  HDFFASERIDQVYLA---------AAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQND 97

Query: 204 VNHFIMVSSLGT--NKFGFPAAILNLFWGVLLW--------KRKAEEALIA----SGLPY 249
           VN  + + S          P A   L  G L          K    +   +     G  Y
Sbjct: 98  VNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDY 157

Query: 250 TIVRPGGMERPTDAY 264
             V P  +  P D +
Sbjct: 158 RSVMPTNLYGPHDNF 172

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 45.1 bits (105), Expect = 8e-06
 Identities = 23/133 (17%), Positives = 41/133 (30%), Gaps = 17/133 (12%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
            + G  G +GS      L  G  +          +NL +      L    +         
Sbjct: 4   LITGGCGFLGSNLASFALSQGIDLIV-------FDNLSRKGATDNLHWLSSLGNF----- 51

Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEV----FDITGPYRIDFQATKNLVDAA 199
            E V  D+  +  +   +       C   A +  +     +    + I+   T NL++A 
Sbjct: 52  -EFVHGDIRNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAV 110

Query: 200 TIAKVNHFIMVSS 212
                N  I+ SS
Sbjct: 111 RQYNSNCNIIYSS 123

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 43.1 bits (100), Expect = 3e-05
 Identities = 28/224 (12%), Positives = 54/224 (24%), Gaps = 32/224 (14%)

Query: 83  AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVE 142
           A + G TG+ GS     LL  G+ V   +R          +    +++    +       
Sbjct: 4   ALITGITGQDGSYLTEFLLGKGYEVHGLIR-------RSSNFNTQRINHIYIDPHNVNKA 56

Query: 143 MLELVECDLEKRVQIEPALGNASVVICCIGASE----------KEVFDITGPYRIDFQAT 192
           +++L   DL     +   +           A++              D+     +     
Sbjct: 57  LMKLHYADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEA 116

Query: 193 KNLVDAATIAKVNHFIMVSSLGTNKFGFPA---AILNLFWGVLLWKRKAEEALIA----S 245
                  +   V ++   SS        P       +        K  A    +      
Sbjct: 117 VRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAY 176

Query: 246 GLPYTIVRP----GGMERPTDAYK----ETHNITLSQEDTLFGG 281
           GL                     +        I +  +  LF G
Sbjct: 177 GLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLG 220

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 42.6 bits (99), Expect = 5e-05
 Identities = 29/207 (14%), Positives = 48/207 (23%), Gaps = 42/207 (20%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
            + GA G + S   R L   G  V A                    D +      + +  
Sbjct: 19  SITGAGGFIASHIARRLKHEGHYVIA-------------------SDWKKNEHMTEDMFC 59

Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGA---SEKEVFDITGPYRIDFQATKNLVDAAT 200
            E    DL               V               + +     +   + N+++AA 
Sbjct: 60  DEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAAR 119

Query: 201 IAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLW--------------KRKAEEALIA-- 244
           I  +  F   SS     +     +      +                 K   EE      
Sbjct: 120 INGIKRFFYASS--ACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYN 177

Query: 245 --SGLPYTIVRPGGMERPTDAYKETHN 269
              G+   I R   +  P   +K    
Sbjct: 178 KDFGIECRIGRFHNIYGPFGTWKGGRE 204

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 39.6 bits (90), Expect = 4e-04
 Identities = 13/91 (14%), Positives = 23/91 (25%), Gaps = 4/91 (4%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRA----GVRSVQRAENLVQSVKQMKLDGELANKGIQ 139
            V G  G  G  T   L K  + V        R       L        +   ++     
Sbjct: 5   MVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKAL 64

Query: 140 PVEMLELVECDLEKRVQIEPALGNASVVICC 170
             + +EL   D+     +  +  +       
Sbjct: 65  TGKSIELYVGDICDFEFLAESFKSFEPDSVV 95

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 38.6 bits (88), Expect = 6e-04
 Identities = 9/43 (20%), Positives = 15/43 (34%), Gaps = 8/43 (18%)

Query: 71  TPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS 113
           TP +          +AGATG  G   +  +L      +    +
Sbjct: 1   TPKRV--------LLAGATGLTGEHLLDRILSEPTLAKVIAPA 35

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 39.1 bits (89), Expect = 7e-04
 Identities = 10/46 (21%), Positives = 17/46 (36%)

Query: 83  AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMK 128
            FV G TG  G      L  +G  V+    +     +L ++ +   
Sbjct: 11  VFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVAD 56

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 38.1 bits (87), Expect = 0.001
 Identities = 12/30 (40%), Positives = 17/30 (56%)

Query: 83  AFVAGATGKVGSRTVRELLKLGFRVRAGVR 112
           A V G TG+ G+   + LL+ G+RV   V 
Sbjct: 3   ALVTGITGQDGAYLAKLLLEKGYRVHGLVA 32

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.1 bits (87), Expect = 0.001
 Identities = 20/95 (21%), Positives = 33/95 (34%), Gaps = 6/95 (6%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
            V G  G +GS TV ELL+ G+                   + ++   EL  + +     
Sbjct: 6   LVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSV----- 60

Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEV 178
            E  E D+  +  ++      S +     A  K V
Sbjct: 61  -EFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAV 94

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 37.3 bits (85), Expect = 0.002
 Identities = 29/130 (22%), Positives = 45/130 (34%), Gaps = 16/130 (12%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
            V G  G +GS TV EL++ G+           A+NL  S         +A   +     
Sbjct: 5   LVTGGAGYIGSHTVVELIENGYDCVV-------ADNLSNSTY-----DSVARLEVLTKHH 52

Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGP----YRIDFQATKNLVDAA 199
           +   E DL  R  +E       +      A  K V + T      Y  +   T  L++  
Sbjct: 53  IPFYEVDLCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELM 112

Query: 200 TIAKVNHFIM 209
               V+ F+ 
Sbjct: 113 QQYNVSKFVF 122

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.1 bits (84), Expect = 0.002
 Identities = 10/32 (31%), Positives = 18/32 (56%), Gaps = 2/32 (6%)

Query: 84  FVAGATGKVGSRTVRELLKLGF--RVRAGVRS 113
           F+ GA+G+ G   ++E+L+ G   +V    R 
Sbjct: 18  FILGASGETGRVLLKEILEQGLFSKVTLIGRR 49

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 36.9 bits (85), Expect = 0.003
 Identities = 34/192 (17%), Positives = 52/192 (27%), Gaps = 11/192 (5%)

Query: 83  AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVE 142
             V GA G +G        + G  V               S    K+  E+  +G + V 
Sbjct: 10  VLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVA 69

Query: 143 MLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNL--VDAAT 200
             + VE   +         G   VV+   G      F        D     +L      T
Sbjct: 70  NYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVT 129

Query: 201 IAKVNHF--------IMVSSLGTNKFGFPAAILNLF-WGVLLWKRKAEEALIASGLPYTI 251
            A  +H         IM +S       F  A  +    G+L            + +    
Sbjct: 130 RAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNT 189

Query: 252 VRPGGMERPTDA 263
           + P    R T+ 
Sbjct: 190 IAPNAGSRMTET 201

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 36.5 bits (83), Expect = 0.004
 Identities = 16/87 (18%), Positives = 30/87 (34%), Gaps = 12/87 (13%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
            V G  G +GS  V  +      V   V      + L  +  +  L+  L ++       
Sbjct: 6   IVTGGAGFIGSNFVHYVYNNHPDVHVTVL-----DKLTYAGNKANLEAILGDR------- 53

Query: 144 LELVECDLEKRVQIEPALGNASVVICC 170
           +ELV  D+     ++     A  ++  
Sbjct: 54  VELVVGDIADAELVDKLAAKADAIVHY 80

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.2 bits (83), Expect = 0.004
 Identities = 33/196 (16%), Positives = 67/196 (34%), Gaps = 25/196 (12%)

Query: 83  AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVE 142
           A V G    +G   V+ELL+LG  V    R ++R ++    ++      + A        
Sbjct: 15  AIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQAR------- 67

Query: 143 MLELVECDLEKRVQIEPA-------LGNASVVICCIGASEKEVFDITGP------YRIDF 189
            +  ++C++    ++           G  + ++   G       +             + 
Sbjct: 68  -VIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNL 126

Query: 190 QATKNLVDAATIAKV--NHFIMVSSLGTNKFGFPAAILNLF--WGVLLWKRKAEEALIAS 245
             T  +  A   + +  +   +V+ +   K GFP A+ +     GV    +        S
Sbjct: 127 TGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVHSGAARAGVYNLTKSLALEWACS 186

Query: 246 GLPYTIVRPGGMERPT 261
           G+    V PG +   T
Sbjct: 187 GIRINCVAPGVIYSQT 202

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	380
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	100.0
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	100.0
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.97
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.97
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.97
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.97
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.97
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.97
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.97
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.96
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.96
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.96
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.96
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.96
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.96
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.96
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.96
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.96
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.95
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.95
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.95
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.94
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.94
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.94
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.94
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.93
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.92
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.92
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.92
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.91
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.91
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.9
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.9
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.9
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.9
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.9
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.9
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.9
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.9
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.9
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.9
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.9
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.9
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.9
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.9
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.9
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.9
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.89
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.89
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.89
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.89
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.89
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.89
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.89
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.89
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.89
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.89
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.89
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.89
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.89
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.89
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.88
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.88
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.88
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.87
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.87
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.87
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.87
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.86
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.86
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.86
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.85
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.85
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.84
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.84
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.84
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.84
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.84
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.83
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.81
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.81
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.81
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.8
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.79
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.78
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.76
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.75
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.74
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.73
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.73
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.73
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.69
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.67
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.63
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.61
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.59
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.4
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	98.75
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	98.63
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	98.47
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	98.46
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	98.43
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	98.4
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	98.26
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.25
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	98.2
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.13
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	98.11
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	98.11
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	98.1
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	98.08
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	98.08
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	98.07
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	98.05
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	98.04
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	97.99
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	97.95
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.94
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.94
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	97.94
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	97.9
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.83
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.82
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.79
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	97.78
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.77
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	97.72
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.69
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.65
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.64
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.63
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	97.62
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.57
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.57
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.56
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	97.55
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.54
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.53
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.43
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	97.38
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.35
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.34
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	97.34
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.32
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	97.29
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.29
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.27
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.26
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	97.24
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	97.23
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	97.21
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	97.19
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	97.17
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	97.15
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	97.15
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.12
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	97.1
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	97.02
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	97.01
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	96.96
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	96.95
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	96.93
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	96.89
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.83
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	96.77
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.74
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.71
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	96.69
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.58
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.56
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	96.55
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	96.55
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	96.54
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	96.53
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.52
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.46
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.43
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	96.43
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	96.41
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	96.37
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	96.3
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	96.27
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	96.23
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	96.22
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.21
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	96.2
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	96.2
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	96.14
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	96.13
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	96.12
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	96.04
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	95.95
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	95.94
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	95.93
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	95.91
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	95.77
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	95.67
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	95.65
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	95.53
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	95.5
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	95.4
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	95.38
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	95.36
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	95.3
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	95.29
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	95.26
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.12
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	95.1
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	95.09
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	95.02
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.02
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	95.02
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	94.93
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	94.85
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	94.82
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	94.73
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	94.7
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	94.68
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	94.66
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	94.64
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.63
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	94.59
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.34
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	94.25
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	94.21
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	94.17
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	94.09
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	94.07
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	94.05
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	93.91
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	93.91
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	93.79
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	93.76
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.75
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	93.56
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.3
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	93.24
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	93.14
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	93.1
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	93.07
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	92.87
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	92.86
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	92.66
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	92.66
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	92.53
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	92.32
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	92.31
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	92.18
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	92.15
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	92.13
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	91.97
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	91.96
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	91.96
d1vjta1	193	Putative alpha-glucosidase TM0752 {Thermotoga mari	91.93
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	91.87
d2dt5a2	126	Transcriptional repressor Rex, C-terminal domain {	91.82
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	91.7
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	91.7
d1x7da_	340	Ornithine cyclodeaminase {Pseudomonas putida [TaxI	91.69
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	91.54
d1uwva2	358	rRNA (Uracil-5-)-methyltransferase RumA, catalytic	91.47
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	91.35
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	90.97
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	90.77
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	90.62
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	90.48
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	90.25
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	90.21
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	90.17
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	89.97
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	89.72
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	89.37
d1k3ta1	190	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	89.34
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	89.24
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	88.75
d1dssg1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	88.52
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	88.39
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	88.33
d2vapa1	209	Cell-division protein FtsZ {Archaeon Methanococcus	88.32
d1w5fa1	194	Cell-division protein FtsZ {Thermotoga maritima [T	88.21
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	88.2
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	88.2
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	88.13
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	88.06
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	87.88
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	87.8
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	87.39
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	87.21
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	86.72
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	86.63
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	86.51
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	86.43
d1omoa_	320	Archaeal alanine dehydrogenase {Archaeon Archaeogl	86.17
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	85.99
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	85.85
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	85.72
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	85.66
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	85.57
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	85.55
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	85.53
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	85.43
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	85.32
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	84.79
d1gado1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	84.71
d1n4wa1	367	Cholesterol oxidase of GMC family {Streptomyces sp	84.65
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	84.0
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	83.78
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	83.43
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	83.34
d2b4ro1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	83.2
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	83.16
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	83.06
d1rq2a1	198	Cell-division protein FtsZ {Mycobacterium tubercul	82.95
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	82.47
d1d7ya1	183	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	82.1
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	81.6
d1u8fo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	81.56
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	81.36
d1np3a2	182	Class I ketol-acid reductoisomerase (KARI) {Pseudo	81.35
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	81.3
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	81.26
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	81.06
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	81.04
d1hdgo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	80.77
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	80.58
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	80.53
d2bisa1	437	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	80.31

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=6.6e-34  Score=271.72  Aligned_cols=234  Identities=14%  Similarity=0.017  Sum_probs=175.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchh-----HHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR-----AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~  155 (380)
                      |+|||||||||||++|+++|+++|++|++++|..+.     ...+...             ......+++++++|++|.+
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~Dl~d~~   68 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQD-------------PHTCNPKFHLHYGDLSDTS   68 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC----------------------------------CCEEECCCCSSCHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhh-------------hhhcCCCeEEEEeecCCHH
Confidence            689999999999999999999999999999996532     1221110             0112268999999999999


Q ss_pred             cHHHHhcC--CCEEEEccccCc--cccCCCCCcchhhHHHHHHHHHHHHHcCCC---EEEEEccCCCCCCC-----Cchh
Q 016901          156 QIEPALGN--ASVVICCIGASE--KEVFDITGPYRIDFQATKNLVDAATIAKVN---HFIMVSSLGTNKFG-----FPAA  223 (380)
Q Consensus       156 ~~~~a~~~--~d~Vi~~Ag~~~--~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~---r~V~~SS~~~~~~~-----~~~~  223 (380)
                      ++.+++++  +|+|||+|+...  ....++...+++|+.||.+|+++|++.+++   ||||+||..++...     .++.
T Consensus        69 ~~~~~~~~~~~d~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~~  148 (357)
T d1db3a_          69 NLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETT  148 (357)
T ss_dssp             HHHHHHHHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTS
T ss_pred             HHHHHHhccCCCEEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCCC
Confidence            99999975  699999998653  233444556899999999999999987654   79999998774221     1223


Q ss_pred             hhchhhHHHHHHHHHHHHHHH----CCCCEEEEecCcccCCCccccc---------------ccceeeccCCcccCCCCC
Q 016901          224 ILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE---------------THNITLSQEDTLFGGQVS  284 (380)
Q Consensus       224 ~~~~~~~Y~~sK~~~E~~l~~----~g~~~~ivRpg~v~gp~~~~~~---------------~~~~~~~~~~~~~~~~i~  284 (380)
                      +..|.+.|+.+|+++|++++.    ++++++++||+++|||+.....               ..............+++|
T Consensus       149 ~~~P~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~  228 (357)
T d1db3a_         149 PFYPRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGH  228 (357)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEE
T ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeeccee
Confidence            455778899999999988863    6899999999999999642110               011111122333346899


Q ss_pred             HHHHHHHHHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCCC
Q 016901          285 NLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQ  330 (380)
Q Consensus       285 ~~DvA~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~  330 (380)
                      ++|+|++++.+++.+.   ++.||+++++..|+.++++++.+..|.
T Consensus       229 v~D~~~a~~~~~~~~~---~~~yni~sg~~~s~~~~~~~~~~~~g~  271 (357)
T d1db3a_         229 AKDYVKMQWMMLQQEQ---PEDFVIATGVQYSVRQFVEMAAAQLGI  271 (357)
T ss_dssp             HHHHHHHHHHTTSSSS---CCCEEECCCCCEEHHHHHHHHHHTTTE
T ss_pred             echHHHHHHHHHhCCC---CCeEEECCCCceehHHHHHHHHHHhCC
Confidence            9999999999987654   689999999999999999999999874

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.5e-32  Score=238.97  Aligned_cols=203  Identities=17%  Similarity=0.148  Sum_probs=163.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      |.+++|+||||||+||++++++|+++|++|++++|++++....                   ...+++++.+|++|.+++
T Consensus         1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~-------------------~~~~~~~~~gD~~d~~~l   61 (205)
T d1hdoa_           1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE-------------------GPRPAHVVVGDVLQAADV   61 (205)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS-------------------SCCCSEEEESCTTSHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc-------------------cccccccccccccchhhH
Confidence            4678999999999999999999999999999999998874321                   226799999999999999


Q ss_pred             HHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCCchhhhchhhHHHHHHHH
Q 016901          158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRK  237 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~~Y~~sK~~  237 (380)
                      .++++++|+|||++|...     .....+++..+++++++++++++++|||++||.++..  .+.........|...|..
T Consensus        62 ~~al~~~d~vi~~~g~~~-----~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~--~~~~~~~~~~~~~~~~~~  134 (205)
T d1hdoa_          62 DKTVAGQDAVIVLLGTRN-----DLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLW--DPTKVPPRLQAVTDDHIR  134 (205)
T ss_dssp             HHHHTTCSEEEECCCCTT-----CCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS--CTTCSCGGGHHHHHHHHH
T ss_pred             HHHhcCCCEEEEEeccCC-----chhhhhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccC--CCccccccccccchHHHH
Confidence            999999999999998642     2233578899999999999999999999999988733  233333445679999999


Q ss_pred             HHHHHHHCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHHHHhCCCCccCcEEEEec
Q 016901          238 AEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIA  311 (380)
Q Consensus       238 ~E~~l~~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~~~~~~~~~ni~~  311 (380)
                      +|+++++.|++||+||||.+++...    .....+.........+|+++|+|++++.++++++ ..++.+.++.
T Consensus       135 ~e~~l~~~~~~~tiirp~~~~~~~~----~~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~-~~g~~~~~s~  203 (205)
T d1hdoa_         135 MHKVLRESGLKYVAVMPPHIGDQPL----TGAYTVTLDGRGPSRVISKHDLGHFMLRCLTTDE-YDGHSTYPSH  203 (205)
T ss_dssp             HHHHHHHTCSEEEEECCSEEECCCC----CSCCEEESSSCSSCSEEEHHHHHHHHHHTTSCST-TTTCEEEEEC
T ss_pred             HHHHHHhcCCceEEEecceecCCCC----cccEEEeeCCCCCCCcCCHHHHHHHHHHHhCCCC-CCCEEEecCC
Confidence            9999999999999999999985422    2222333333344568999999999999999987 4577776654

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.97  E-value=1.5e-31  Score=255.38  Aligned_cols=233  Identities=15%  Similarity=0.030  Sum_probs=181.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ++|+|||||||||||++|+++|+++|++|++++|......                   .......++..+|++|.+.+.
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~-------------------~~~~~~~~~~~~D~~~~~~~~   74 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM-------------------TEDMFCDEFHLVDLRVMENCL   74 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSS-------------------CGGGTCSEEEECCTTSHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccch-------------------hhhcccCcEEEeechhHHHHH
Confidence            6789999999999999999999999999999987543210                   001156788999999999999


Q ss_pred             HHhcCCCEEEEccccCcccc---CCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCC------------chh
Q 016901          159 PALGNASVVICCIGASEKEV---FDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF------------PAA  223 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~~~~---~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~------------~~~  223 (380)
                      +++.++|+|||+|+......   ........+|+.++.+++++|++.++++|||+||..++....            ...
T Consensus        75 ~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~  154 (363)
T d2c5aa1          75 KVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAW  154 (363)
T ss_dssp             HHHTTCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGS
T ss_pred             HHhhcCCeEeecccccccccccccccccccccccchhhHHHHhHHhhCccccccccccccccccccccccccccccccCC
Confidence            99999999999997654322   233344778999999999999999999999999987743211            112


Q ss_pred             hhchhhHHHHHHHHHHHHHH----HCCCCEEEEecCcccCCCcccccccc----------------eeeccCCcccCCCC
Q 016901          224 ILNLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKETHN----------------ITLSQEDTLFGGQV  283 (380)
Q Consensus       224 ~~~~~~~Y~~sK~~~E~~l~----~~g~~~~ivRpg~v~gp~~~~~~~~~----------------~~~~~~~~~~~~~i  283 (380)
                      +..+.+.|+.+|.++|++++    ..|++++++||+++|||++.......                ......+....+++
T Consensus       155 ~~~p~~~Yg~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i  234 (363)
T d2c5aa1         155 PAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFT  234 (363)
T ss_dssp             SBCCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCE
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEEe
Confidence            34456789999999999886    36999999999999999764321111                11111222344689


Q ss_pred             CHHHHHHHHHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCCCCCC
Q 016901          284 SNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE  333 (380)
Q Consensus       284 ~~~DvA~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~~~  333 (380)
                      |++|+++++..+++.+.   +++||++++...+..++++++.++.+....
T Consensus       235 ~v~D~~~~~~~~~~~~~---~~~~ni~~~~~~s~~~l~~~i~~~~g~~~~  281 (363)
T d2c5aa1         235 FIDECVEGVLRLTKSDF---REPVNIGSDEMVSMNEMAEMVLSFEEKKLP  281 (363)
T ss_dssp             EHHHHHHHHHHHHHSSC---CSCEEECCCCCEEHHHHHHHHHHTTTCCCC
T ss_pred             ehhHHHHHHHHHHhCCC---CCeEEEecCCcccHHHHHHHHHHHhCCCCc
Confidence            99999999999998754   789999999999999999999999887544

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.4e-32  Score=257.58  Aligned_cols=230  Identities=13%  Similarity=0.100  Sum_probs=170.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchh-HHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR-AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      .|+|||||||||||++|+++|+++|++|++++|.... ...+..               .....++++...|+     ++
T Consensus         1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~---------------~~~~~~~d~~~~~~-----~~   60 (312)
T d2b69a1           1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEH---------------WIGHENFELINHDV-----VE   60 (312)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGG---------------GTTCTTEEEEECCT-----TS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHH---------------hcCCCceEEEehHH-----HH
Confidence            3689999999999999999999999999999873321 111100               00113455555554     44


Q ss_pred             HHhcCCCEEEEccccCcc--ccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCC----------chhhhc
Q 016901          159 PALGNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF----------PAAILN  226 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~~--~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~----------~~~~~~  226 (380)
                      .++.++|+|||+|+....  ...++...+++|+.|+.+++++|++.++ ++||+||..++....          ...+..
T Consensus        61 ~~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~~-k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~  139 (312)
T d2b69a1          61 PLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIG  139 (312)
T ss_dssp             CCCCCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSS
T ss_pred             HHHcCCCEEEECcccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEEChheecCCCCCCCCccccCCCCCCC
Confidence            556789999999986532  2234455689999999999999999987 899999987743211          112345


Q ss_pred             hhhHHHHHHHHHHHHHH----HCCCCEEEEecCcccCCCccccccc-------------ceeeccCCcccCCCCCHHHHH
Q 016901          227 LFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKETH-------------NITLSQEDTLFGGQVSNLQVA  289 (380)
Q Consensus       227 ~~~~Y~~sK~~~E~~l~----~~g~~~~ivRpg~v~gp~~~~~~~~-------------~~~~~~~~~~~~~~i~~~DvA  289 (380)
                      |.+.|+.+|.++|.+++    .+|++++++||++||||++......             .+.+........+++|++|++
T Consensus       140 p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~  219 (312)
T d2b69a1         140 PRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLV  219 (312)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHH
T ss_pred             CccHHHHHHHHHHHHHHHHHHHhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHH
Confidence            77889999999999886    4799999999999999976432211             122222333334689999999


Q ss_pred             HHHHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCCCCCC
Q 016901          290 ELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE  333 (380)
Q Consensus       290 ~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~~~  333 (380)
                      ++++.+++...   ++.||++++...++.+++++++++.+....
T Consensus       220 ~~~~~~~~~~~---~~~~n~~~~~~~~~~~~~~~i~~~~~~~~~  260 (312)
T d2b69a1         220 NGLVALMNSNV---SSPVNLGNPEEHTILEFAQLIKNLVGSGSE  260 (312)
T ss_dssp             HHHHHHHTSSC---CSCEEESCCCEEEHHHHHHHHHHHHTCCCC
T ss_pred             HHHHHHHhhcc---CCceEecCCcccchhhHHHHHHHHhCCCCc
Confidence            99999987654   678999999999999999999999987554

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=5.6e-31  Score=249.21  Aligned_cols=241  Identities=15%  Similarity=0.086  Sum_probs=178.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      |+|||||||||||++|++.|+++|++|++++|-...........+...            ..+++++++|++|.+.+.++
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~------------~~~~~~~~~Dl~d~~~l~~~   68 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLG------------GKHPTFVEGDIRNEALMTEI   68 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHH------------TSCCEEEECCTTCHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhc------------CCCCEEEEeecCCHHHHHHH
Confidence            679999999999999999999999999999873221111111111110            16899999999999999999


Q ss_pred             hc--CCCEEEEccccCcc--ccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCCc------hhhhchhhH
Q 016901          161 LG--NASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFP------AAILNLFWG  230 (380)
Q Consensus       161 ~~--~~d~Vi~~Ag~~~~--~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~------~~~~~~~~~  230 (380)
                      ++  ++|+|||+|+....  ...++...+++|+.|+.+++++|++.++++||++||..++.....      .....+.+.
T Consensus        69 ~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~~~  148 (338)
T d1udca_          69 LHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSP  148 (338)
T ss_dssp             HHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSH
T ss_pred             HhccCCCEEEECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEccccccccccccccCCCcch
Confidence            97  79999999986432  223445668999999999999999999999999999877533211      113356778


Q ss_pred             HHHHHHHHHHHHHH-----CCCCEEEEecCcccCCCccccc----------------------ccceeeccC------Cc
Q 016901          231 VLLWKRKAEEALIA-----SGLPYTIVRPGGMERPTDAYKE----------------------THNITLSQE------DT  277 (380)
Q Consensus       231 Y~~sK~~~E~~l~~-----~g~~~~ivRpg~v~gp~~~~~~----------------------~~~~~~~~~------~~  277 (380)
                      |+.+|..+|+++.+     .+++++++||+++|||+.....                      ...+.+...      ..
T Consensus       149 Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~  228 (338)
T d1udca_         149 YGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGT  228 (338)
T ss_dssp             HHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSS
T ss_pred             HHHHHhhhhHHHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCC
Confidence            99999999998863     5899999999999998643110                      001111111      12


Q ss_pred             ccCCCCCHHHHHHHHHHHHhCCC-CccCcEEEEecCCCCCcchHHHHHHhcCCCCCC
Q 016901          278 LFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE  333 (380)
Q Consensus       278 ~~~~~i~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~~~  333 (380)
                      ...+++|++|++.++..+..... ...+++||+++++..++.++++.+.+++|....
T Consensus       229 ~~rd~i~v~D~~~~~~~~~~~~~~~~~~~i~Ni~~~~~~si~e~~~~i~~~~g~~~~  285 (338)
T d1udca_         229 GVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVN  285 (338)
T ss_dssp             CEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSSCEEHHHHHHHHHHHHTSCCC
T ss_pred             ceeeEEEEeehhhhccccccccccccCcceeeecCCCCCcHHHHHHHHHHHHCCCCc
Confidence            22357999999988877665422 234689999999999999999999999986544

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.97  E-value=1.5e-31  Score=251.34  Aligned_cols=235  Identities=15%  Similarity=0.068  Sum_probs=180.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEE------EEeCCch--hHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCC
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVR------AGVRSVQ--RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLE  152 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~------~l~R~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~  152 (380)
                      |+|||||||||||++|++.|+++|++|+      .+++...  ....+.               ......+++++.+|+.
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~---------------~~~~~~~~~~~~~d~~   65 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLA---------------PVDADPRLRFVHGDIR   65 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGG---------------GGTTCTTEEEEECCTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhh---------------hhhcCCCeEEEEeccc
Confidence            6899999999999999999999997554      3432211  100000               0112368999999999


Q ss_pred             ChhcHHHHhcCCCEEEEccccCccc--cCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCC-----Cchhhh
Q 016901          153 KRVQIEPALGNASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAIL  225 (380)
Q Consensus       153 d~~~~~~a~~~~d~Vi~~Ag~~~~~--~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~-----~~~~~~  225 (380)
                      +...+......+|.|||+|+.....  ..+....+++|+.|+.+++++|.+.++++|||+||..++...     .+..+.
T Consensus        66 ~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg~~~~~~~~E~~~~  145 (322)
T d1r6da_          66 DAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPL  145 (322)
T ss_dssp             CHHHHHHHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCC
T ss_pred             cchhhhccccccceEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceeecCCCCCCCCCCCCC
Confidence            9999998999999999999764322  224455578999999999999999999999999998775322     233455


Q ss_pred             chhhHHHHHHHHHHHHHH----HCCCCEEEEecCcccCCCcccc-----------cccceeeccCCcccCCCCCHHHHHH
Q 016901          226 NLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYK-----------ETHNITLSQEDTLFGGQVSNLQVAE  290 (380)
Q Consensus       226 ~~~~~Y~~sK~~~E~~l~----~~g~~~~ivRpg~v~gp~~~~~-----------~~~~~~~~~~~~~~~~~i~~~DvA~  290 (380)
                      .|.+.|+.+|..+|.+++    +++++++++||+++|||++...           ....+.+...+....+++|++|+|+
T Consensus       146 ~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~  225 (322)
T d1r6da_         146 EPNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCR  225 (322)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHH
Confidence            677789999999998886    4699999999999999976431           1122233333334446899999999


Q ss_pred             HHHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCCCCC
Q 016901          291 LLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (380)
Q Consensus       291 ~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~~  332 (380)
                      ++..+++++..  +++||+++++..++.++++.+.+.++...
T Consensus       226 ai~~~~~~~~~--~~~~ni~~~~~~s~~e~~~~i~~~~~~~~  265 (322)
T d1r6da_         226 GIALVLAGGRA--GEIYHIGGGLELTNRELTGILLDSLGADW  265 (322)
T ss_dssp             HHHHHHHHCCT--TCEEEECCCCEEEHHHHHHHHHHHHTCCG
T ss_pred             HHHHHHhCCCC--CCeeEEeecccchhHHHHHHHHHHhCCCc
Confidence            99999998764  78999999999999999999999998654

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.97  E-value=2.9e-30  Score=244.76  Aligned_cols=239  Identities=18%  Similarity=0.101  Sum_probs=177.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      .+++|||||||||||++|+++|+++|++|++++|+.++...+.........           .....++.+|++|.+++.
T Consensus        10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~-----------~~~~~~~~~Dl~~~~~~~   78 (342)
T d1y1pa1          10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYP-----------GRFETAVVEDMLKQGAYD   78 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHST-----------TTEEEEECSCTTSTTTTT
T ss_pred             CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhcccc-----------ccccEEEeccccchhhhh
Confidence            578999999999999999999999999999999998876665543322111           134556889999999999


Q ss_pred             HHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHc-CCCEEEEEccCCCCCCCC-----------------
Q 016901          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA-KVNHFIMVSSLGTNKFGF-----------------  220 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~-~v~r~V~~SS~~~~~~~~-----------------  220 (380)
                      +++.++|+|+|+++..... .+....+++|+.||.+++++|.+. ++++|||+||+++.....                 
T Consensus        79 ~~~~~~~~v~~~a~~~~~~-~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~  157 (342)
T d1y1pa1          79 EVIKGAAGVAHIASVVSFS-NKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLES  157 (342)
T ss_dssp             TTTTTCSEEEECCCCCSCC-SCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHH
T ss_pred             hhcccchhhhhhccccccc-ccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCcccccccccccc
Confidence            9999999999999865432 233445678999999999999886 599999999975422111                 


Q ss_pred             --------chhhhchhhHHHHHHHHHHHHHH----H--CCCCEEEEecCcccCCCccccccc-------------ceeec
Q 016901          221 --------PAAILNLFWGVLLWKRKAEEALI----A--SGLPYTIVRPGGMERPTDAYKETH-------------NITLS  273 (380)
Q Consensus       221 --------~~~~~~~~~~Y~~sK~~~E~~l~----~--~g~~~~ivRpg~v~gp~~~~~~~~-------------~~~~~  273 (380)
                              +..+.++.++|+.+|..+|.+++    +  .+++++++||+.++||........             .....
T Consensus       158 ~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~  237 (342)
T d1y1pa1         158 IDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPA  237 (342)
T ss_dssp             HHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHH
T ss_pred             ccccccccccCCCCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCcCcc
Confidence                    11234567789999999998765    3  357789999999999853211100             00000


Q ss_pred             cCCcccCCCCCHHHHHHHHHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCCCC
Q 016901          274 QEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (380)
Q Consensus       274 ~~~~~~~~~i~~~DvA~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~  331 (380)
                      ........++|++|+|++++.+++++..  ++.|++++++..++.|+++++.+.+...
T Consensus       238 ~~~~~~~~~v~v~Dva~~~i~~l~~~~~--~g~~~~~~~~~~t~~eia~~i~k~~p~~  293 (342)
T d1y1pa1         238 LALMPPQYYVSAVDIGLLHLGCLVLPQI--ERRRVYGTAGTFDWNTVLATFRKLYPSK  293 (342)
T ss_dssp             HHTCCSEEEEEHHHHHHHHHHHHHCTTC--CSCEEEECCEEECHHHHHHHHHHHCTTS
T ss_pred             cCCccceeeeeHHHHHHHHHHhhcCccc--cceEEEEcCCceEHHHHHHHHHHHcCCC
Confidence            1111223579999999999999998763  4556688999999999999999887443

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.97  E-value=1e-30  Score=247.57  Aligned_cols=246  Identities=13%  Similarity=0.043  Sum_probs=186.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ++|+|||||||||||++|+++|+++|++|++++|.......-...+..+...        ....+++++.+|+.|...+.
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~d~~d~~~~~   86 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSE--------KQWSNFKFIQGDIRNLDDCN   86 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCH--------HHHTTEEEEECCTTSHHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhh--------cccCCeeEEeeccccccccc
Confidence            5689999999999999999999999999999987332111111111111000        01167999999999999999


Q ss_pred             HHhcCCCEEEEccccCcc--ccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCC-----CchhhhchhhHH
Q 016901          159 PALGNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNLFWGV  231 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~~--~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~-----~~~~~~~~~~~Y  231 (380)
                      ....+.+.|+|+++....  ...++...+++|+.|+.+++++|.+.++++|||+||..++...     .++.+.+|.+.|
T Consensus        87 ~~~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y  166 (341)
T d1sb8a_          87 NACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPY  166 (341)
T ss_dssp             HHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHH
T ss_pred             cccccccccccccccccccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeCCCCCCCccCCCCCCCCCcc
Confidence            999999999999875421  2234445688999999999999999999999999998775322     223455677889


Q ss_pred             HHHHHHHHHHHH----HCCCCEEEEecCcccCCCccccccc---------------ceeeccCCcccCCCCCHHHHHHHH
Q 016901          232 LLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKETH---------------NITLSQEDTLFGGQVSNLQVAELL  292 (380)
Q Consensus       232 ~~sK~~~E~~l~----~~g~~~~ivRpg~v~gp~~~~~~~~---------------~~~~~~~~~~~~~~i~~~DvA~~i  292 (380)
                      +.+|.++|++++    +.+++++++||+++|||++......               .+.+........+++|++|+|.++
T Consensus       167 ~~sK~~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~~a~  246 (341)
T d1sb8a_         167 AVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQAN  246 (341)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccchhh
Confidence            999999998876    3689999999999999975432111               112222233334689999999999


Q ss_pred             HHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCCCCC
Q 016901          293 ACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (380)
Q Consensus       293 ~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~~  332 (380)
                      ..++.......+++||++++...++.++++.+.+..+...
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~si~~i~~~i~~~~~~~~  286 (341)
T d1sb8a_         247 LLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENG  286 (341)
T ss_dssp             HHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTT
T ss_pred             hhhhhccccccceeeeecccccchHHHHHHHHHHHhcccc
Confidence            9999876545688999999999999999999998887554

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.97  E-value=2.2e-31  Score=254.56  Aligned_cols=236  Identities=12%  Similarity=0.064  Sum_probs=175.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      |+|||||||||||++|+++|+++|++|++..++........ .+           .......+++++.+|++|...+.++
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~-~~-----------~~~~~~~~~~~~~~Dl~d~~~l~~~   68 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLE-SL-----------SDISESNRYNFEHADICDSAEITRI   68 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGG-GG-----------TTTTTCTTEEEEECCTTCHHHHHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHH-HH-----------HhhhhcCCcEEEEccCCCHHHHHHH
Confidence            58999999999999999999999998665544322110000 00           0111236899999999999999999


Q ss_pred             hc--CCCEEEEccccCcc--ccCCCCCcchhhHHHHHHHHHHHHHcC---------CCEEEEEccCCCCCCCC-------
Q 016901          161 LG--NASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAK---------VNHFIMVSSLGTNKFGF-------  220 (380)
Q Consensus       161 ~~--~~d~Vi~~Ag~~~~--~~~~~~~~~~~nv~g~~~ll~a~~~~~---------v~r~V~~SS~~~~~~~~-------  220 (380)
                      +.  ++|+|||+|+....  ...++...+++|+.|+.+++++|++.+         +++|||+||..++....       
T Consensus        69 ~~~~~~d~VihlAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~  148 (361)
T d1kewa_          69 FEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVEN  148 (361)
T ss_dssp             HHHHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCT
T ss_pred             HHhCCCCEEEECccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCcccc
Confidence            86  58999999986432  223556678999999999999998764         45999999987753211       


Q ss_pred             --------chhhhchhhHHHHHHHHHHHHHHH----CCCCEEEEecCcccCCCccccc-----------ccceeeccCCc
Q 016901          221 --------PAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE-----------THNITLSQEDT  277 (380)
Q Consensus       221 --------~~~~~~~~~~Y~~sK~~~E~~l~~----~g~~~~ivRpg~v~gp~~~~~~-----------~~~~~~~~~~~  277 (380)
                              ...+..|.+.|+.+|.++|.+++.    +|++++++||+++|||++....           ...+.+...+.
T Consensus       149 ~~~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~g~g~  228 (361)
T d1kewa_         149 SVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGD  228 (361)
T ss_dssp             TSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSC
T ss_pred             ccCCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCcCcHHHHHHHHHHcCCCcEEeCCCC
Confidence                    112345667799999999999864    7999999999999999764211           11222223333


Q ss_pred             ccCCCCCHHHHHHHHHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCCC
Q 016901          278 LFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQ  330 (380)
Q Consensus       278 ~~~~~i~~~DvA~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~  330 (380)
                      ...+++|++|+|+++..++++...  +++|||++++..+..++++.+.+.++.
T Consensus       229 ~~r~~i~v~D~a~ai~~~~~~~~~--~~~~Ni~s~~~~s~~~~~~~i~~~~~~  279 (361)
T d1kewa_         229 QIRDWLYVEDHARALHMVVTEGKA--GETYNIGGHNEKKNLDVVFTICDLLDE  279 (361)
T ss_dssp             CEEEEEEHHHHHHHHHHHHHHCCT--TCEEEECCCCEEEHHHHHHHHHHHHHH
T ss_pred             eEEeCEEHHHHHHHHHHHHhcCCC--CCeEEECCCCCcchHHHHhHhhhhccc
Confidence            344689999999999999998663  789999999999999999998876543

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.96  E-value=4.5e-29  Score=222.92  Aligned_cols=227  Identities=26%  Similarity=0.347  Sum_probs=176.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCe--EEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFR--VRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~--V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ++++|||||||||||+++++.|+++|++  |+++.|++++...+.                    .+++++.+|++|.+.
T Consensus         2 ~~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~--------------------~~~~~~~~d~~~~~~   61 (252)
T d2q46a1           2 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIG--------------------GEADVFIGDITDADS   61 (252)
T ss_dssp             SCCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTT--------------------CCTTEEECCTTSHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhcc--------------------CCcEEEEeeeccccc
Confidence            5689999999999999999999999964  677889887655421                    578999999999999


Q ss_pred             HHHHhcCCCEEEEccccCcccc---------------CCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCCc
Q 016901          157 IEPALGNASVVICCIGASEKEV---------------FDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFP  221 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag~~~~~~---------------~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~  221 (380)
                      +.++++++|+|||+|+......               ........+|+.|+.++++.+...+.+++.+.|+........+
T Consensus        62 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~  141 (252)
T d2q46a1          62 INPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHP  141 (252)
T ss_dssp             HHHHHTTCSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCG
T ss_pred             cccccccceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccccccccccccccccCCCCcc
Confidence            9999999999999998542111               1233346789999999999999999999999999877544333


Q ss_pred             hhhhchhhHHHHHHHHHHHHHHHCCCCEEEEecCcccCCCcccccccceeeccC---CcccCCCCCHHHHHHHHHHHHhC
Q 016901          222 AAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQE---DTLFGGQVSNLQVAELLACMAKN  298 (380)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~---~~~~~~~i~~~DvA~~i~~~l~~  298 (380)
                      .. ......|...+...+.+....|++++++||+++|||......   ......   .....++||++|+|++++.++++
T Consensus       142 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~---~~~~~~~~~~~~~~~~i~~~Dva~a~~~~l~~  217 (252)
T d2q46a1         142 LN-KLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVRE---LLVGKDDELLQTDTKTVPRADVAEVCIQALLF  217 (252)
T ss_dssp             GG-GGGGCCHHHHHHHHHHHHHHSSSCEEEEEECEEECSCTTSSC---EEEESTTGGGGSSCCEEEHHHHHHHHHHHTTC
T ss_pred             cc-cccccchhhhhhhhhhhhhcccccceeecceEEECCCcchhh---hhhccCcccccCCCCeEEHHHHHHHHHHHhCC
Confidence            32 223445888888888888899999999999999999753221   111111   11223689999999999999998


Q ss_pred             CCCccCcEEEEecCC---CCCcchHHHHHHhcCCC
Q 016901          299 RSLSYCKVVEVIAET---TAPLTPMEELLAKIPSQ  330 (380)
Q Consensus       299 ~~~~~~~~~ni~~~~---~~s~~~~~e~~~~~~~~  330 (380)
                      +. ..+++|||+++.   ..+..++.++++++.++
T Consensus       218 ~~-~~g~~~~i~~~~~~~~~~~~~~~~lf~~i~~r  251 (252)
T d2q46a1         218 EE-AKNKAFDLGSKPEGTSTPTKDFKALFSQVTSR  251 (252)
T ss_dssp             GG-GTTEEEEEEECCTTTSCCCCCHHHHHTTCCCC
T ss_pred             cc-ccCcEEEEeeCCCCCChhHHHHHHHHHHHHhc
Confidence            77 568999999854   34678999999988764

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.96  E-value=2.8e-30  Score=245.05  Aligned_cols=238  Identities=15%  Similarity=0.044  Sum_probs=177.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      +|+|||||||||||++|+++|+++|++|.+++++.........     .+       ......+++++.+|++|.+.+.+
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~-----~~-------~~~~~~~i~~~~~Di~d~~~~~~   69 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKA-----NL-------EAILGDRVELVVGDIADAELVDK   69 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGG-----GT-------GGGCSSSEEEEECCTTCHHHHHH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHH-----HH-------HHhhcCCeEEEEccCCCHHHHHH
Confidence            6899999999999999999999999887666553210000000     00       00012689999999999999999


Q ss_pred             HhcCCCEEEEccccCccc--cCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCC-----------------C
Q 016901          160 ALGNASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----------------F  220 (380)
Q Consensus       160 a~~~~d~Vi~~Ag~~~~~--~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~-----------------~  220 (380)
                      ++.++|.|+|+|+.....  ..++...+++|+.|+.++++++...+. ++|++||..++...                 .
T Consensus        70 ~~~~~~~v~~~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~~-k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~  148 (346)
T d1oc2a_          70 LAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFT  148 (346)
T ss_dssp             HHTTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBC
T ss_pred             HHhhhhhhhhhhhcccccchhhCcccceeeehHhHHhhhhhhccccc-cccccccceEecccCccccccccccCcccccc
Confidence            999999999999865432  234556688999999999999999985 78899887664210                 0


Q ss_pred             chhhhchhhHHHHHHHHHHHHHH----HCCCCEEEEecCcccCCCcccc-----------cccceeeccCCcccCCCCCH
Q 016901          221 PAAILNLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYK-----------ETHNITLSQEDTLFGGQVSN  285 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~----~~g~~~~ivRpg~v~gp~~~~~-----------~~~~~~~~~~~~~~~~~i~~  285 (380)
                      +.....|.+.|+.+|.++|.+++    ..+++++++||+++|||++...           ......+.........++|+
T Consensus       149 e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v  228 (346)
T d1oc2a_         149 AETNYNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHT  228 (346)
T ss_dssp             TTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEH
T ss_pred             cCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCccchhHHHHHHHHcCCceeEeCCCCccccccch
Confidence            11233456779999999998886    4789999999999999975321           11112222333344468999


Q ss_pred             HHHHHHHHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCCCCC
Q 016901          286 LQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (380)
Q Consensus       286 ~DvA~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~~  332 (380)
                      +|+|++++.++.++..  ++.||+++++..+..++++.+.+..+...
T Consensus       229 ~D~a~a~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  273 (346)
T d1oc2a_         229 NDHSTGVWAILTKGRM--GETYLIGADGEKNNKEVLELILEKMGQPK  273 (346)
T ss_dssp             HHHHHHHHHHHHHCCT--TCEEEECCSCEEEHHHHHHHHHHHTTCCT
T ss_pred             hhHHHHHHHHHhhccc--CccccccccccccchHHHHHHHHHhCCCC
Confidence            9999999999887664  88999999999999999999998887654

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.96  E-value=3.2e-29  Score=234.75  Aligned_cols=234  Identities=14%  Similarity=-0.016  Sum_probs=176.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhH--HHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRA--ENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      |+|||||||||||++|+++|+++||+|++++|..+..  ..+.    .++           ..++++++.+|++|...+.
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~----~~~-----------~~~~~~~~~~Dl~d~~~~~   65 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLR----ELG-----------IEGDIQYEDGDMADACSVQ   65 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHH----HTT-----------CGGGEEEEECCTTCHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHH----Hhc-----------ccCCcEEEEccccChHHhh
Confidence            5899999999999999999999999999999965421  2211    111           1268999999999999998


Q ss_pred             HHhc--CCCEEEEccccCccc--cCCCCCcchhhHHHHHHHHHHHHHcCCC-EEEEEccCCCCCCC-----Cchhhhchh
Q 016901          159 PALG--NASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVSSLGTNKFG-----FPAAILNLF  228 (380)
Q Consensus       159 ~a~~--~~d~Vi~~Ag~~~~~--~~~~~~~~~~nv~g~~~ll~a~~~~~v~-r~V~~SS~~~~~~~-----~~~~~~~~~  228 (380)
                      +.+.  ..++++|+|+.....  ..+....+++|+.|+.+++++|++.+++ +|++.||..++...     .+..+..+.
T Consensus        66 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~  145 (321)
T d1rpna_          66 RAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPR  145 (321)
T ss_dssp             HHHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCC
T ss_pred             hhhccccccccccccccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCCCCCCCcccc
Confidence            8875  467888888754322  2233445788999999999999998855 78888886553221     223345567


Q ss_pred             hHHHHHHHHHHHHHH----HCCCCEEEEecCcccCCCccccc---------------ccceeeccCCcccCCCCCHHHHH
Q 016901          229 WGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKE---------------THNITLSQEDTLFGGQVSNLQVA  289 (380)
Q Consensus       229 ~~Y~~sK~~~E~~l~----~~g~~~~ivRpg~v~gp~~~~~~---------------~~~~~~~~~~~~~~~~i~~~DvA  289 (380)
                      +.|+.+|.++|.+++    +++++++++||+++|||......               ..............+++|++|+|
T Consensus       146 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~  225 (321)
T d1rpna_         146 SPYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYV  225 (321)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHH
T ss_pred             ChhHHHHHHHHHHHHHHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHH
Confidence            889999999999876    37899999999999999642111               01111112223334689999999


Q ss_pred             HHHHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCCCCC
Q 016901          290 ELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (380)
Q Consensus       290 ~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~~  332 (380)
                      ++++.+++++.   ++.||+++++..++.++++.+.+..+...
T Consensus       226 ~~~~~~~~~~~---~~~~ni~~~~~~s~~~~~~~~~~~~~~~~  265 (321)
T d1rpna_         226 EAMWLMLQQDK---ADDYVVATGVTTTVRDMCQIAFEHVGLDY  265 (321)
T ss_dssp             HHHHHHHHSSS---CCCEEECCSCEEEHHHHHHHHHHTTTCCG
T ss_pred             HHHHHHHhcCC---cCCceecccccceehhhhHHHHHHhCCCc
Confidence            99999999876   57799999999999999999999988654

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=5.6e-30  Score=229.79  Aligned_cols=204  Identities=19%  Similarity=0.228  Sum_probs=156.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~--~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~  155 (380)
                      |++++|||||||||||++|+++|+++|.  +|++++|++.+...                   ....++++..+|+.+.+
T Consensus        12 m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~-------------------~~~~~i~~~~~D~~~~~   72 (232)
T d2bkaa1          12 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE-------------------EAYKNVNQEVVDFEKLD   72 (232)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCS-------------------GGGGGCEEEECCGGGGG
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcc-------------------cccceeeeeeecccccc
Confidence            4668999999999999999999999994  89999998754221                   12267888999999999


Q ss_pred             cHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCCchhhhchhhHHHHHH
Q 016901          156 QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWK  235 (380)
Q Consensus       156 ~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~~Y~~sK  235 (380)
                      ++.+++.++|+||||+|.... ..+...+.++|+.++.+++++|++.++++|||+||.+++..        +...|+.+|
T Consensus        73 ~~~~~~~~~d~vi~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~~~--------~~~~Y~~~K  143 (232)
T d2bkaa1          73 DYASAFQGHDVGFCCLGTTRG-KAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKS--------SNFLYLQVK  143 (232)
T ss_dssp             GGGGGGSSCSEEEECCCCCHH-HHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT--------CSSHHHHHH
T ss_pred             ccccccccccccccccccccc-ccchhhhhhhcccccceeeecccccCccccccCCccccccC--------ccchhHHHH
Confidence            999999999999999986532 12233457889999999999999999999999999987432        224599999


Q ss_pred             HHHHHHHHHCCCC-EEEEecCcccCCCcccccccce-----eeccCCcccCCCCCHHHHHHHHHHHHhCCCCccCcEEEE
Q 016901          236 RKAEEALIASGLP-YTIVRPGGMERPTDAYKETHNI-----TLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEV  309 (380)
Q Consensus       236 ~~~E~~l~~~g~~-~~ivRpg~v~gp~~~~~~~~~~-----~~~~~~~~~~~~i~~~DvA~~i~~~l~~~~~~~~~~~ni  309 (380)
                      +.+|+.+++.+.+ ++|||||.+||+++.......+     ............|+++|+|++++.++.++..  ++.+.+
T Consensus       144 ~~~E~~l~~~~~~~~~IlRP~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~dvA~a~i~~~~~~~~--~~~~i~  221 (232)
T d2bkaa1         144 GEVEAKVEELKFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPRD--KQMELL  221 (232)
T ss_dssp             HHHHHHHHTTCCSEEEEEECCEEECTTGGGSHHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSCCC--SSEEEE
T ss_pred             HHhhhccccccccceEEecCceeecCCCcCcHHHHHHHHHhhccCCcccCCCeEEHHHHHHHHHHHHhcCcc--CCeEEE
Confidence            9999999998886 9999999999997543211110     1111111222469999999999999988764  555555


Q ss_pred             ec
Q 016901          310 IA  311 (380)
Q Consensus       310 ~~  311 (380)
                      .+
T Consensus       222 ~~  223 (232)
T d2bkaa1         222 EN  223 (232)
T ss_dssp             EH
T ss_pred             cH
Confidence            44

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=4.6e-29  Score=235.97  Aligned_cols=235  Identities=14%  Similarity=0.136  Sum_probs=174.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      |+|||||||||||++|+++|+++| ++|+++++.......+.                  ..++++++.+|+++.+.+.+
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~------------------~~~~~~~i~~Di~~~~~~~~   62 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL------------------NHPHFHFVEGDISIHSEWIE   62 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT------------------TCTTEEEEECCTTTCSHHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhc------------------cCCCeEEEECccCChHHHHH
Confidence            589999999999999999999999 58999988655433221                  12789999999998766655


Q ss_pred             -HhcCCCEEEEccccCccc--cCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCCc------------hhh
Q 016901          160 -ALGNASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFP------------AAI  224 (380)
Q Consensus       160 -a~~~~d~Vi~~Ag~~~~~--~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~------------~~~  224 (380)
                       +++++|+|||+|+.....  ..++...+.+|+.|+.+++++|.+.++ +++|+||..++.....            ...
T Consensus        63 ~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~-~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~  141 (342)
T d2blla1          63 YHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRK-RIIFPSTSEVYGMCSDKYFDEDHSNLIVGPV  141 (342)
T ss_dssp             HHHHHCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTC-EEEEECCGGGGBTCCCSSBCTTTCCCBCCCT
T ss_pred             HHHhCCCccccccccccccccccCCccccccccccccccccccccccc-ccccccccccccccccccccccccccccccc
Confidence             667899999999865322  223344578999999999999999987 5567787654221100            112


Q ss_pred             hchhhHHHHHHHHHHHHHHH----CCCCEEEEecCcccCCCccccc-------------------ccceeeccCCcccCC
Q 016901          225 LNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE-------------------THNITLSQEDTLFGG  281 (380)
Q Consensus       225 ~~~~~~Y~~sK~~~E~~l~~----~g~~~~ivRpg~v~gp~~~~~~-------------------~~~~~~~~~~~~~~~  281 (380)
                      ..+...|+.+|..+|++++.    .|++++++||+.+|||+.....                   ...+.+.........
T Consensus       142 ~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~  221 (342)
T d2blla1         142 NKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRC  221 (342)
T ss_dssp             TCGGGHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEE
T ss_pred             CCCcchhhhcccchhhhhhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeee
Confidence            34567899999999998863    6999999999999998642211                   111222233334446


Q ss_pred             CCCHHHHHHHHHHHHhCCC-CccCcEEEEecCCC-CCcchHHHHHHhcCCCCCCC
Q 016901          282 QVSNLQVAELLACMAKNRS-LSYCKVVEVIAETT-APLTPMEELLAKIPSQRAEP  334 (380)
Q Consensus       282 ~i~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~~-~s~~~~~e~~~~~~~~~~~~  334 (380)
                      ++|++|+|+++..+++++. ...+++||+++++. .|+.++++.+.+..+.....
T Consensus       222 ~i~v~D~~~a~~~~~~~~~~~~~g~~~Nig~~~~~~t~~~l~~~i~~~~~~~~~~  276 (342)
T d2blla1         222 FTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR  276 (342)
T ss_dssp             CEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTG
T ss_pred             ecccccccceeeeehhhccccCCCeEEEEecccchhHHHHHHHHHHHHhCCCccc
Confidence            8999999999999998853 24578999998765 68999999999998865543

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.96  E-value=1.2e-28  Score=233.80  Aligned_cols=241  Identities=15%  Similarity=0.114  Sum_probs=174.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchh-HHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR-AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      |+|||||||||||++|+++|+++|++|++++|-... ...... ....            ...+++++.+|++|.+.+++
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~-~~~~------------~~~~v~~~~~Dl~d~~~l~~   68 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVAR-LEVL------------TKHHIPFYEVDLCDRKGLEK   68 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHH-HHHH------------HTSCCCEEECCTTCHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHh-HHhh------------cccCCeEEEeecCCHHHHHH
Confidence            579999999999999999999999999999763221 111111 0100            01679999999999999999


Q ss_pred             Hhc--CCCEEEEccccCcc--ccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCC---------Cchhhhc
Q 016901          160 ALG--NASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG---------FPAAILN  226 (380)
Q Consensus       160 a~~--~~d~Vi~~Ag~~~~--~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~---------~~~~~~~  226 (380)
                      ++.  ++|+|||+|+....  ...++.....+|+.|+.+++++|++.+++||||+||+.++...         .+..+..
T Consensus        69 ~~~~~~~d~VihlAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~  148 (347)
T d1z45a2          69 VFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLG  148 (347)
T ss_dssp             HHHHSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCC
T ss_pred             HHhccCCCEEEEccccccccccccCcccccccchhhhHHHHHHHHhcccceEEeecceeeecCcccCCCCCccccccCCC
Confidence            886  79999999986532  2223445578999999999999999999999999998775321         1123345


Q ss_pred             hhhHHHHHHHHHHHHHHH------CCCCEEEEecCcccCCCcccc--c------cc--------------ceeeccCCc-
Q 016901          227 LFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYK--E------TH--------------NITLSQEDT-  277 (380)
Q Consensus       227 ~~~~Y~~sK~~~E~~l~~------~g~~~~ivRpg~v~gp~~~~~--~------~~--------------~~~~~~~~~-  277 (380)
                      +.+.|+.+|.++|++++.      .+++++++||+++||+.....  .      ..              .+.+..... 
T Consensus       149 p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~  228 (347)
T d1z45a2         149 PTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYD  228 (347)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC-----
T ss_pred             CCChhHhHHHHHHHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCcc
Confidence            667899999999988763      578999999999998743210  0      00              000000110 


Q ss_pred             -----ccCCCCCHHHHHHHHHHHHhCC-----CCccCcEEEEecCCCCCcchHHHHHHhcCCCCCCC
Q 016901          278 -----LFGGQVSNLQVAELLACMAKNR-----SLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP  334 (380)
Q Consensus       278 -----~~~~~i~~~DvA~~i~~~l~~~-----~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~~~~  334 (380)
                           ...+++++.|++.+++.+++..     ....+++||+++++..++.++++++.++.+.....
T Consensus       229 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~~~~~s~~e~~~~i~~~~~~~~~~  295 (347)
T d1z45a2         229 SRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPY  295 (347)
T ss_dssp             -CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC
T ss_pred             ccCCceeeeeeeeecccccccccccccccccccccccccceecCCCcccHHHHHHHHHHHHCCCCce
Confidence                 1124677888888888877631     12347899999999999999999999999876543

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.96  E-value=7.5e-29  Score=239.07  Aligned_cols=238  Identities=14%  Similarity=0.053  Sum_probs=165.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCch----------------hHHHHHHHHHhhhhcccccccCCCCCCc
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ----------------RAENLVQSVKQMKLDGELANKGIQPVEM  143 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (380)
                      +|+|||||||||||++|+++|+++||+|++++.-..                ............            ...+
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~   68 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKAL------------TGKS   68 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHH------------HCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhh------------cCCC
Confidence            589999999999999999999999999999862111                111111111110            0157


Q ss_pred             eEEEEcCCCChhcHHHHhc--CCCEEEEccccCccccC--C---CCCcchhhHHHHHHHHHHHHHcCCC-EEEEEccCCC
Q 016901          144 LELVECDLEKRVQIEPALG--NASVVICCIGASEKEVF--D---ITGPYRIDFQATKNLVDAATIAKVN-HFIMVSSLGT  215 (380)
Q Consensus       144 v~~~~~Dl~d~~~~~~a~~--~~d~Vi~~Ag~~~~~~~--~---~~~~~~~nv~g~~~ll~a~~~~~v~-r~V~~SS~~~  215 (380)
                      ++++.+|++|.+.+.+++.  ++|+|||+|+.......  +   +...+++|+.|+.+++++|++.+++ ++++.||..+
T Consensus        69 i~~~~~Dl~d~~~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~  148 (393)
T d1i24a_          69 IELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGE  148 (393)
T ss_dssp             CEEEESCTTSHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGG
T ss_pred             cEEEEccCCCHHHHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeecccccc
Confidence            9999999999999999997  47999999986532221  1   2234688999999999999998865 6777777655


Q ss_pred             CCCCC-c-----------------hhhhchhhHHHHHHHHHHHHHH----HCCCCEEEEecCcccCCCcccccc------
Q 016901          216 NKFGF-P-----------------AAILNLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKET------  267 (380)
Q Consensus       216 ~~~~~-~-----------------~~~~~~~~~Y~~sK~~~E~~l~----~~g~~~~ivRpg~v~gp~~~~~~~------  267 (380)
                      +.... +                 ..+..+.+.|+.+|+.+|.+++    +++++++++||+++|||.......      
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~  228 (393)
T d1i24a_         149 YGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRN  228 (393)
T ss_dssp             GCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCC
T ss_pred             ccccccccccccccccccccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCcccccccccccc
Confidence            32211 0                 0123455679999999998875    579999999999999996432110      


Q ss_pred             ----------------------cceeeccCCcccCCCCCHHHHHHHHHHHHhCCCCccCcEEEE-ecCCCCCcchHHHHH
Q 016901          268 ----------------------HNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEV-IAETTAPLTPMEELL  324 (380)
Q Consensus       268 ----------------------~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~~~~~~~~~ni-~~~~~~s~~~~~e~~  324 (380)
                                            ..+.+........+++|++|+++++..++++... .+..+.+ ++++..++.++++++
T Consensus       229 ~~~~~~~~~~~i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~~-~g~~~~~~~~~~~~si~el~~~i  307 (393)
T d1i24a_         229 RLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAK-AGEFRVFNQFTEQFSVNELASLV  307 (393)
T ss_dssp             CCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCC-TTCEEEEEECSEEEEHHHHHHHH
T ss_pred             ccccccccccchhhhhHHhhcCCeeEEeeecccccccccccchHHHHHHHHHhhcc-cceeeeecCCCCeeEHHHHHHHH
Confidence                                  0111122233334689999999999999998663 3332222 445567789999999


Q ss_pred             HhcCCC
Q 016901          325 AKIPSQ  330 (380)
Q Consensus       325 ~~~~~~  330 (380)
                      .++.+.
T Consensus       308 ~~~~~~  313 (393)
T d1i24a_         308 TKAGSK  313 (393)
T ss_dssp             HHHHHT
T ss_pred             HHHHHh
Confidence            887654

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.1e-28  Score=233.60  Aligned_cols=236  Identities=14%  Similarity=-0.029  Sum_probs=173.4

Q ss_pred             CeE-EEEcCCChHHHHHHHHHHHCCCeEEEEeCCchh-----HHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCCh
Q 016901           81 NLA-FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR-----AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (380)
Q Consensus        81 ~~v-lVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~  154 (380)
                      |+| ||||||||||++|+++|+++||+|++++|..+.     .+.+...            .......+++++.+|++|.
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~Dl~d~   68 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKN------------PQAHIEGNMKLHYGDLTDS   68 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------------------CEEEEECCTTCH
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhc------------hhhhccCCcEEEEeecCCc
Confidence            457 999999999999999999999999999996532     1111000            0011125789999999999


Q ss_pred             hcHHHHhc--CCCEEEEccccCcc--ccCCCCCcchhhHHHHHHHHHHHHHcCC---CEEEEEccCCCCCCC-----Cch
Q 016901          155 VQIEPALG--NASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKV---NHFIMVSSLGTNKFG-----FPA  222 (380)
Q Consensus       155 ~~~~~a~~--~~d~Vi~~Ag~~~~--~~~~~~~~~~~nv~g~~~ll~a~~~~~v---~r~V~~SS~~~~~~~-----~~~  222 (380)
                      +.+..++.  ++++|+|+++....  ...+....+++|+.||.+++++|++.++   ++|||+||..++...     .++
T Consensus        69 ~~~~~~~~~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~  148 (347)
T d1t2aa_          69 TCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKET  148 (347)
T ss_dssp             HHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTT
T ss_pred             hhhHHHHhhcccceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCCCCC
Confidence            99999985  57899999875432  1223334468999999999999999875   489999998774321     223


Q ss_pred             hhhchhhHHHHHHHHHHHHHH----HCCCCEEEEecCcccCCCccccc---------------ccceeeccCCcccCCCC
Q 016901          223 AILNLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKE---------------THNITLSQEDTLFGGQV  283 (380)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~----~~g~~~~ivRpg~v~gp~~~~~~---------------~~~~~~~~~~~~~~~~i  283 (380)
                      .+.+|.+.|+.+|.++|++++    +++++++++||+++|||+.....               ..............+++
T Consensus       149 ~~~~P~~~Yg~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i  228 (347)
T d1t2aa_         149 TPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWG  228 (347)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCE
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeee
Confidence            445677889999999999886    36999999999999999642211               11112222333344789


Q ss_pred             CHHHHHHHHHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCCCC
Q 016901          284 SNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (380)
Q Consensus       284 ~~~DvA~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~  331 (380)
                      |++|+++++..++++..   .+.|+++.....+..+..+.+....+..
T Consensus       229 ~v~D~~~a~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (347)
T d1t2aa_         229 HAKDYVEAMWLMLQNDE---PEDFVIATGEVHSVREFVEKSFLHIGKT  273 (347)
T ss_dssp             EHHHHHHHHHHHHHSSS---CCCEEECCSCCEEHHHHHHHHHHHTTCC
T ss_pred             EecHHHHHHHHHhhcCC---Cccceeccccccccchhhhhhhhhhcce
Confidence            99999999999999876   4668888888888888888887777654

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.96  E-value=2.6e-28  Score=234.58  Aligned_cols=249  Identities=16%  Similarity=0.044  Sum_probs=178.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHH-CCCeEEEEeC---C------chhHHHHHHHHHhhhhcccccccCCCCCCceEEEEc
Q 016901           80 DNLAFVAGATGKVGSRTVRELLK-LGFRVRAGVR---S------VQRAENLVQSVKQMKLDGELANKGIQPVEMLELVEC  149 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~-~G~~V~~l~R---~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  149 (380)
                      .|+|||||||||||++|+++|++ .|++|+++++   .      ....+.....++.....     .......++.++.+
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~   76 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGP-----KPPWADRYAALEVG   76 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSS-----CCTTTTCCCEEEES
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccc-----cccccccceEEEEC
Confidence            46899999999999999999996 6899999874   1      11222222222211100     01112257889999


Q ss_pred             CCCChhcHHHHhc---CCCEEEEccccCcccc--CCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCC----
Q 016901          150 DLEKRVQIEPALG---NASVVICCIGASEKEV--FDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF----  220 (380)
Q Consensus       150 Dl~d~~~~~~a~~---~~d~Vi~~Ag~~~~~~--~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~----  220 (380)
                      |++|.+.+++++.   ++|+|||+|+......  .+....+++|+.++.++++++++.++++++++||..++....    
T Consensus        77 Di~d~~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~  156 (383)
T d1gy8a_          77 DVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSV  156 (383)
T ss_dssp             CTTCHHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC---
T ss_pred             cccCHHHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccCCcccccccccccccccccccc
Confidence            9999999998884   6899999998653221  123344788999999999999999999999999876532211    


Q ss_pred             --------chhhhchhhHHHHHHHHHHHHHHH----CCCCEEEEecCcccCCCcccccccc-------------------
Q 016901          221 --------PAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKETHN-------------------  269 (380)
Q Consensus       221 --------~~~~~~~~~~Y~~sK~~~E~~l~~----~g~~~~ivRpg~v~gp~~~~~~~~~-------------------  269 (380)
                              .+....|.+.|+.+|..+|++++.    +|++++++||+++|||++.......                   
T Consensus       157 ~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~  236 (383)
T d1gy8a_         157 STNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDI  236 (383)
T ss_dssp             --CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHH
T ss_pred             cccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHHHHHHhhc
Confidence                    122345678899999999999863    7999999999999999764321100                   


Q ss_pred             -----------------eeecc------CCcccCCCCCHHHHHHHHHHHHhCC-------CCccCcEEEEecCCCCCcch
Q 016901          270 -----------------ITLSQ------EDTLFGGQVSNLQVAELLACMAKNR-------SLSYCKVVEVIAETTAPLTP  319 (380)
Q Consensus       270 -----------------~~~~~------~~~~~~~~i~~~DvA~~i~~~l~~~-------~~~~~~~~ni~~~~~~s~~~  319 (380)
                                       +.+..      +.....+++|++|+|++++.+++..       ....+++||+++++..++.|
T Consensus       237 ~~~~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~~~~s~~e  316 (383)
T d1gy8a_         237 APDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVRE  316 (383)
T ss_dssp             SCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHH
T ss_pred             cccccchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEeCCCCceeHHH
Confidence                             00000      0112235799999999999988642       11346799999999999999


Q ss_pred             HHHHHHhcCCCCCC
Q 016901          320 MEELLAKIPSQRAE  333 (380)
Q Consensus       320 ~~e~~~~~~~~~~~  333 (380)
                      +++++.++.+....
T Consensus       317 l~~~i~~~~~~~~~  330 (383)
T d1gy8a_         317 VIEVARKTTGHPIP  330 (383)
T ss_dssp             HHHHHHHHHCCCCC
T ss_pred             HHHHHHHHhCCCCc
Confidence            99999999886544

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.9e-28  Score=232.12  Aligned_cols=242  Identities=15%  Similarity=0.091  Sum_probs=175.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC------chhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCC
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS------VQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK  153 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d  153 (380)
                      .++|||||||||||++|+++|+++|++|++++|.      ........+.+...            ...++.++.+|++|
T Consensus         2 ~kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~Dl~d   69 (346)
T d1ek6a_           2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQEL------------TGRSVEFEEMDILD   69 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHH------------HTCCCEEEECCTTC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHh------------cCCCcEEEEeeccc
Confidence            3689999999999999999999999999999751      11111111111111            01689999999999


Q ss_pred             hhcHHHHhcC--CCEEEEccccCccc--cCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCCch------h
Q 016901          154 RVQIEPALGN--ASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPA------A  223 (380)
Q Consensus       154 ~~~~~~a~~~--~d~Vi~~Ag~~~~~--~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~~------~  223 (380)
                      .+.+.+++.+  +++|+|+|+.....  ..++...+++|+.|+.++++++++.++++|+|+||+.++......      .
T Consensus        70 ~~~l~~~~~~~~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~~~~~~~~~~~~~  149 (346)
T d1ek6a_          70 QGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHP  149 (346)
T ss_dssp             HHHHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSC
T ss_pred             cccccccccccccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcCcccccccccceeeecccccccccccc
Confidence            9999998854  56899999865322  223445588999999999999999999999999998764432211      1


Q ss_pred             hhchhhHHHHHHHHHHHHHHH-----CCCCEEEEecCcccCCCccccc----------------------ccceeecc--
Q 016901          224 ILNLFWGVLLWKRKAEEALIA-----SGLPYTIVRPGGMERPTDAYKE----------------------THNITLSQ--  274 (380)
Q Consensus       224 ~~~~~~~Y~~sK~~~E~~l~~-----~g~~~~ivRpg~v~gp~~~~~~----------------------~~~~~~~~--  274 (380)
                      ...+.++|+.+|..+|+.+++     .+++++++||+.+|||......                      ...+.+..  
T Consensus       150 ~~~~~~~Y~~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~  229 (346)
T d1ek6a_         150 TGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGND  229 (346)
T ss_dssp             CCCCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSC
T ss_pred             ccccCChHHHHHHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCc
Confidence            233556799999999988763     5899999999999998642100                      00011111  


Q ss_pred             ----CCcccCCCCCHHHHHHHHHHHHhCCC-CccCcEEEEecCCCCCcchHHHHHHhcCCCCCC
Q 016901          275 ----EDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE  333 (380)
Q Consensus       275 ----~~~~~~~~i~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~~~  333 (380)
                          ......+++|++|+|.++..++.... ...+++||+++++..++.|+++.+.++++....
T Consensus       230 ~~~~~g~~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s~~dl~~~i~~~~~~~~~  293 (346)
T d1ek6a_         230 YDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIP  293 (346)
T ss_dssp             SSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCC
T ss_pred             ccCCCCCeeEeEEEEEeccchhhhhccccccccCceEEEeCCCCcccHHHHHHHHHHHhCCCCC
Confidence                11112358999999999988765432 234789999999999999999999999987543

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=1.2e-27  Score=223.44  Aligned_cols=221  Identities=14%  Similarity=0.085  Sum_probs=168.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      .|+|||||||||||++|+++|+++|+.|+++.+..                                 ..|+.|.+.+.+
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~---------------------------------~~~~~~~~~~~~   48 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD---------------------------------ELNLLDSRAVHD   48 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT---------------------------------TCCTTCHHHHHH
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch---------------------------------hccccCHHHHHH
Confidence            46899999999999999999999999988764431                                 258899988888


Q ss_pred             Hhc--CCCEEEEccccCcccc---CCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCCc-----hh-----h
Q 016901          160 ALG--NASVVICCIGASEKEV---FDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFP-----AA-----I  224 (380)
Q Consensus       160 a~~--~~d~Vi~~Ag~~~~~~---~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~-----~~-----~  224 (380)
                      ++.  .+|.|||+|+......   .+....+++|+.||.+++++|.+.+++||||+||.+++....+     ..     +
T Consensus        49 ~~~~~~~d~v~~~a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~  128 (315)
T d1e6ua_          49 FFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTL  128 (315)
T ss_dssp             HHHHHCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCC
T ss_pred             HHhhcCCCEEEEcchhccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCceEcCCCCCCCccCCccccCCC
Confidence            874  5899999997653321   2333446889999999999999999999999999887542211     11     1


Q ss_pred             hchhhHHHHHHHHHHHHHH----HCCCCEEEEecCcccCCCccccccc--------------------ceeeccCCcccC
Q 016901          225 LNLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKETH--------------------NITLSQEDTLFG  280 (380)
Q Consensus       225 ~~~~~~Y~~sK~~~E~~l~----~~g~~~~ivRpg~v~gp~~~~~~~~--------------------~~~~~~~~~~~~  280 (380)
                      ..+.+.|+.+|.++|++++    +.|++++++||++||||++.+....                    .+..........
T Consensus       129 ~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~  208 (315)
T d1e6ua_         129 EPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMR  208 (315)
T ss_dssp             CGGGHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEE
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEE
Confidence            2234579999999999886    4699999999999999976432111                    111122223334


Q ss_pred             CCCCHHHHHHHHHHHHhCCC-------CccCcEEEEecCCCCCcchHHHHHHhcCCCCCC
Q 016901          281 GQVSNLQVAELLACMAKNRS-------LSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE  333 (380)
Q Consensus       281 ~~i~~~DvA~~i~~~l~~~~-------~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~~~  333 (380)
                      .++|++|++.++..++.+..       ......++++.+...++.++++++.++++....
T Consensus       209 ~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~  268 (315)
T d1e6ua_         209 EFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGR  268 (315)
T ss_dssp             CEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSE
T ss_pred             EEEEeehhHHHHHHhhhhccccccccccccccccccCCCcchHHHHHHHHHHHHhCCCcc
Confidence            78999999999999987642       123567999999999999999999999887653

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.95  E-value=1.9e-27  Score=224.08  Aligned_cols=239  Identities=13%  Similarity=-0.004  Sum_probs=172.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCch-----hHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCCh
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ-----RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~  154 (380)
                      .|++||||||||||+||+++|+++||+|++++|..+     +...+......            .....++++.+|+++.
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~Di~~~   68 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHN------------VNKALMKLHYADLTDA   68 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------------------CCEEEEECCTTCH
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhh------------ccccceEEEEccccCH
Confidence            378999999999999999999999999999999543     11111100000            0125688999999999


Q ss_pred             hcHHHHhc--CCCEEEEccccCcccc--CCCCCcchhhHHHHHHHHHHHHHcC-----CCEEEEEccCCCCCCC----Cc
Q 016901          155 VQIEPALG--NASVVICCIGASEKEV--FDITGPYRIDFQATKNLVDAATIAK-----VNHFIMVSSLGTNKFG----FP  221 (380)
Q Consensus       155 ~~~~~a~~--~~d~Vi~~Ag~~~~~~--~~~~~~~~~nv~g~~~ll~a~~~~~-----v~r~V~~SS~~~~~~~----~~  221 (380)
                      +.+.+.+.  ++|+|||+|+......  .++...+.+|+.|+.+++++++..+     ..++++.||.......    .+
T Consensus        69 ~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~E  148 (339)
T d1n7ha_          69 SSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSE  148 (339)
T ss_dssp             HHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCT
T ss_pred             HHHHHHHhhhccchhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCCCC
Confidence            99998885  6899999998653321  2344557889999999999987532     3467777776543221    22


Q ss_pred             hhhhchhhHHHHHHHHHHHHHH----HCCCCEEEEecCcccCCCccccc---------------ccceeeccCCcccCCC
Q 016901          222 AAILNLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKE---------------THNITLSQEDTLFGGQ  282 (380)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~----~~g~~~~ivRpg~v~gp~~~~~~---------------~~~~~~~~~~~~~~~~  282 (380)
                      ..+..|.+.|+.+|..+|.++.    .++++++++||+++|||......               ..............++
T Consensus       149 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~  228 (339)
T d1n7ha_         149 TTPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDW  228 (339)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEEC
T ss_pred             CCCCCCcchhhHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccc
Confidence            3445677889999999998875    47999999999999999642210               0011112223333468


Q ss_pred             CCHHHHHHHHHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCCCCCC
Q 016901          283 VSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE  333 (380)
Q Consensus       283 i~~~DvA~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~~~~  333 (380)
                      +|++|+|+++..+++++.   ...+++..+...+..++++++.++.+....
T Consensus       229 ~~v~D~a~~~~~~~~~~~---~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~  276 (339)
T d1n7ha_         229 GFAGDYVEAMWLMLQQEK---PDDYVVATEEGHTVEEFLDVSFGYLGLNWK  276 (339)
T ss_dssp             EEHHHHHHHHHHHHTSSS---CCEEEECCSCEEEHHHHHHHHHHHTTCCGG
T ss_pred             eeeehHHHHHHHHHhcCC---CCccccccccccccchhhhhhhhhhhcccC
Confidence            999999999999999876   455677788888899999999999887543

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.94  E-value=3.4e-27  Score=221.67  Aligned_cols=237  Identities=15%  Similarity=0.106  Sum_probs=172.0

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC--chhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRS--VQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        82 ~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      +|||||||||||++|+++|+++|++|+++++-  ......+. .+..              ..+++++.+|++|.+.+.+
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~-~~~~--------------~~~~~~i~~Di~~~~~l~~   66 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLH-WLSS--------------LGNFEFVHGDIRNKNDVTR   66 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHH-HHHT--------------TCCCEEEECCTTCHHHHHH
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHH-Hhhc--------------cCCcEEEEcccCCHHHHHH
Confidence            69999999999999999999999999998752  22222211 1111              2689999999999999999


Q ss_pred             HhcC--CCEEEEccccCcccc--CCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCC---------------
Q 016901          160 ALGN--ASVVICCIGASEKEV--FDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF---------------  220 (380)
Q Consensus       160 a~~~--~d~Vi~~Ag~~~~~~--~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~---------------  220 (380)
                      ++++  +|+|||+|+......  .++...+++|+.||.+|+++|.+.+++++|+.||.++.....               
T Consensus        67 ~~~~~~~d~Vih~aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~  146 (338)
T d1orra_          67 LITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCV  146 (338)
T ss_dssp             HHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEET
T ss_pred             HHHhcCCceEEeecccccccccccChHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccccccccc
Confidence            9965  699999998654322  244556789999999999999999988777777754321110               


Q ss_pred             -------chhhhchhhHHHHHHHHHHHHHH----HCCCCEEEEecCcccCCCccccc-------------------ccce
Q 016901          221 -------PAAILNLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKE-------------------THNI  270 (380)
Q Consensus       221 -------~~~~~~~~~~Y~~sK~~~E~~l~----~~g~~~~ivRpg~v~gp~~~~~~-------------------~~~~  270 (380)
                             ......+.+.|+.+|...|.++.    .++...+++|+..+|++......                   ...+
T Consensus       147 ~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (338)
T d1orra_         147 DKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPF  226 (338)
T ss_dssp             TCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCE
T ss_pred             ccccCcccCCccccccccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCce
Confidence                   01123456789999999998764    47899999999999876432211                   1112


Q ss_pred             eeccCCcccCCCCCHHHHHHHHHHHHhCCCCccCcEEEEecC--CCCCcchHHHHHHhcCCCCCC
Q 016901          271 TLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAE--TTAPLTPMEELLAKIPSQRAE  333 (380)
Q Consensus       271 ~~~~~~~~~~~~i~~~DvA~~i~~~l~~~~~~~~~~~ni~~~--~~~s~~~~~e~~~~~~~~~~~  333 (380)
                      .+...+....+++|++|++++++.++++.....+++|++..+  ...++.|+++.+.++.+....
T Consensus       227 ~~~g~g~~~r~~~~v~D~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~s~~e~~~~i~~~~~~~~~  291 (338)
T d1orra_         227 TISGNGKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMR  291 (338)
T ss_dssp             EEESSSCCEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCC
T ss_pred             EEeCCCceeEeeecccchhhHHHHHHhccccccCccccccccccccccHHHHHHHHHHHHCCCce
Confidence            222233334468999999999999998865456889998554  455778999999998886543

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.94  E-value=4.4e-27  Score=218.08  Aligned_cols=233  Identities=17%  Similarity=0.138  Sum_probs=174.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHH-HHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAEN-LVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      ++++|||||||||||++|+++|+++||+|++++|+...... ..+.+..+.            ..+++++.+|++|.+.+
T Consensus         2 ~k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~------------~~~v~~v~~d~~d~~~~   69 (312)
T d1qyda_           2 KKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFK------------QLGAKLIEASLDDHQRL   69 (312)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHH------------TTTCEEECCCSSCHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhc------------cCCcEEEEeecccchhh
Confidence            35679999999999999999999999999999997643211 111111110            16799999999999999


Q ss_pred             HHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCCchhhhchhhHHHHHHHH
Q 016901          158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRK  237 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~~Y~~sK~~  237 (380)
                      .+++.+++++||+++...         ...|..++.++++++.+.+..++++.||.+..... +.....+...|...|..
T Consensus        70 ~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~~-~~~~~~~~~~~~~~~~~  139 (312)
T d1qyda_          70 VDALKQVDVVISALAGGV---------LSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDI-MEHALQPGSITFIDKRK  139 (312)
T ss_dssp             HHHHTTCSEEEECCCCSS---------SSTTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTS-CCCCCSSTTHHHHHHHH
T ss_pred             hhhccCcchhhhhhhhcc---------cccchhhhhHHHHHHHHhcCCcEEEEeeccccCCC-cccccchhhhhhHHHHH
Confidence            999999999999987432         24467778899999999887788889998774432 22333455678899999


Q ss_pred             HHHHHHHCCCCEEEEecCcccCCCcccc---------cccceeeccCCcccCCCCCHHHHHHHHHHHHhCCCCccCcEEE
Q 016901          238 AEEALIASGLPYTIVRPGGMERPTDAYK---------ETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVE  308 (380)
Q Consensus       238 ~E~~l~~~g~~~~ivRpg~v~gp~~~~~---------~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~~~~~~~~~n  308 (380)
                      ++++.++.+++++++||+.+||+.....         ......+.........+||++|+|++++.++.++....+.+|+
T Consensus       140 ~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~~  219 (312)
T d1qyda_         140 VRRAIEAASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYI  219 (312)
T ss_dssp             HHHHHHHTTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSSEEEC
T ss_pred             HHHhhcccccceEEeccceeecCCccchhhHHHHhhhcccccccccccccccceeeHHHHHHHHHHHhcCccccCceEEE
Confidence            9999999999999999999998643211         1111222222333346899999999999999987733334566


Q ss_pred             EecCCCCCcchHHHHHHhcCCCCCC
Q 016901          309 VIAETTAPLTPMEELLAKIPSQRAE  333 (380)
Q Consensus       309 i~~~~~~s~~~~~e~~~~~~~~~~~  333 (380)
                      +++++..|..++++.++++.+....
T Consensus       220 ~~~~~~~s~~e~~~~~~~~~g~~~~  244 (312)
T d1qyda_         220 RPPMNILSQKEVIQIWERLSEQNLD  244 (312)
T ss_dssp             CCGGGEEEHHHHHHHHHHHHTCCCE
T ss_pred             eCCCcCCCHHHHHHHHHHHHCCCCe
Confidence            7777778999999999999887654

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.94  E-value=8e-27  Score=205.85  Aligned_cols=187  Identities=22%  Similarity=0.278  Sum_probs=136.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~--~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      .|+|||||||||||++|+++|+++|+  +|++++|++...                       .+++..   +..|..++
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~-----------------------~~~~~~---~~~d~~~~   55 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE-----------------------HPRLDN---PVGPLAEL   55 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC-----------------------CTTEEC---CBSCHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh-----------------------cccccc---cccchhhh
Confidence            47999999999999999999999997  677777765320                       133433   33343333


Q ss_pred             HHH-hcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCCchhhhchhhHHHHHHH
Q 016901          158 EPA-LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKR  236 (380)
Q Consensus       158 ~~a-~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~~Y~~sK~  236 (380)
                      .+. ...+|+||||+|.............++|+.++.+++++|++.++++|+|+||.+++..        ....|..+|+
T Consensus        56 ~~~~~~~~d~vi~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~~~~--------~~~~y~~~K~  127 (212)
T d2a35a1          56 LPQLDGSIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAK--------SSIFYNRVKG  127 (212)
T ss_dssp             GGGCCSCCSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT--------CSSHHHHHHH
T ss_pred             hhccccchheeeeeeeeeccccccccccccchhhhhhhcccccccccccccccccccccccc--------cccchhHHHH
Confidence            333 3568999999987644434445567899999999999999999999999999988432        2245999999


Q ss_pred             HHHHHHHHCCCC-EEEEecCcccCCCcccccccceeeccCCcccC--CCCCHHHHHHHHHHHHhCCC
Q 016901          237 KAEEALIASGLP-YTIVRPGGMERPTDAYKETHNITLSQEDTLFG--GQVSNLQVAELLACMAKNRS  300 (380)
Q Consensus       237 ~~E~~l~~~g~~-~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~--~~i~~~DvA~~i~~~l~~~~  300 (380)
                      .+|+++++.+.+ ++|+||+.||||.+.......+.........+  .+||++|+|++++.+++++.
T Consensus       128 ~~E~~l~~~~~~~~~I~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~v~DvA~ai~~~~~~~~  194 (212)
T d2a35a1         128 ELEQALQEQGWPQLTIARPSLLFGPREEFRLAEILAAPIARILPGKYHGIEACDLARALWRLALEEG  194 (212)
T ss_dssp             HHHHHHTTSCCSEEEEEECCSEESTTSCEEGGGGTTCCCC----CHHHHHHHHHHHHHHHHHHTCCC
T ss_pred             HHhhhccccccccceeeCCcceeCCcccccHHHHHHHHHhhccCCCCcEEEHHHHHHHHHHHHcCCC
Confidence            999999988875 99999999999976432111111110000111  24999999999999998866

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.94  E-value=6e-27  Score=215.80  Aligned_cols=228  Identities=18%  Similarity=0.183  Sum_probs=171.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHH--HHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL--VQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ++|+|||||||||||++++++|+++|++|++++|+.......  ...+..+.            ..+++++.+|+.+...
T Consensus         2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~------------~~~~~~~~~d~~~~~~   69 (307)
T d1qyca_           2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK------------ASGANIVHGSIDDHAS   69 (307)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH------------TTTCEEECCCTTCHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhc------------cCCcEEEEeecccchh
Confidence            457899999999999999999999999999999976543221  11111111            1578999999999999


Q ss_pred             HHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCCchhhhchhhHHHHHHH
Q 016901          157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKR  236 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~~Y~~sK~  236 (380)
                      +.+++.+++.|||+++..             +..++.++++++...+++++++.|+.+....  ..........+...+.
T Consensus        70 ~~~~~~~~~~vi~~~~~~-------------~~~~~~~~~~a~~~~~~~~~~~~s~~~~~~~--~~~~~~~~~~~~~~~~  134 (307)
T d1qyca_          70 LVEAVKNVDVVISTVGSL-------------QIESQVNIIKAIKEVGTVKRFFPSEFGNDVD--NVHAVEPAKSVFEVKA  134 (307)
T ss_dssp             HHHHHHTCSEEEECCCGG-------------GSGGGHHHHHHHHHHCCCSEEECSCCSSCTT--SCCCCTTHHHHHHHHH
T ss_pred             hhhhhhhceeeeeccccc-------------ccchhhHHHHHHHHhccccceeeeccccccc--cccccccccccccccc
Confidence            999999999999998643             4456778899999999889999998766332  2222234455778888


Q ss_pred             HHHHHHHHCCCCEEEEecCcccCCCccccc--------ccceeeccCCcccCCCCCHHHHHHHHHHHHhCCCCccCcEEE
Q 016901          237 KAEEALIASGLPYTIVRPGGMERPTDAYKE--------THNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVE  308 (380)
Q Consensus       237 ~~E~~l~~~g~~~~ivRpg~v~gp~~~~~~--------~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~~~~~~~~~n  308 (380)
                      ..+.++++.+++++++||+++||+......        .....+.........++|++|+|++++.++.++....+.+|+
T Consensus       135 ~~~~~~~~~~~~~~i~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~  214 (307)
T d1qyca_         135 KVRRAIEAEGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYL  214 (307)
T ss_dssp             HHHHHHHHHTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEEEEC
T ss_pred             cccchhhccCCCceecccceecCCCccchhhhhhhhhhcccceeeecccccccCCcHHHHHHHHHHHhcChhhcCceeEE
Confidence            999999999999999999999987532211        111122222233346899999999999999887733344566


Q ss_pred             EecCCCCCcchHHHHHHhcCCCCCC
Q 016901          309 VIAETTAPLTPMEELLAKIPSQRAE  333 (380)
Q Consensus       309 i~~~~~~s~~~~~e~~~~~~~~~~~  333 (380)
                      +++++..|..|+++.+.++.|.+..
T Consensus       215 ~~~~~~~s~~ei~~~~~~~~G~~~~  239 (307)
T d1qyca_         215 RLPANTLSLNELVALWEKKIDKTLE  239 (307)
T ss_dssp             CCGGGEEEHHHHHHHHHHHTTSCCE
T ss_pred             eCCCCccCHHHHHHHHHHHHCCCCc
Confidence            7888889999999999999997654

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.93  E-value=5.1e-26  Score=208.31  Aligned_cols=214  Identities=14%  Similarity=0.133  Sum_probs=167.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      |+|||||||||||++|+++|.++||+|++++|+.                                  +|+.|.++++++
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~----------------------------------~D~~d~~~~~~~   47 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD----------------------------------LDITNVLAVNKF   47 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT----------------------------------CCTTCHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh----------------------------------ccCCCHHHHHHH
Confidence            6799999999999999999999999999998752                                  589999999999


Q ss_pred             hc--CCCEEEEccccCcccc--CCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCC-----CchhhhchhhHH
Q 016901          161 LG--NASVVICCIGASEKEV--FDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNLFWGV  231 (380)
Q Consensus       161 ~~--~~d~Vi~~Ag~~~~~~--~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~-----~~~~~~~~~~~Y  231 (380)
                      ++  ++|+|||+|+......  .........|+....++.+.+...+. ++++.||..++...     .+.....+...|
T Consensus        48 l~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~  126 (281)
T d1vl0a_          48 FNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGEAKEPITEFDEVNPQSAY  126 (281)
T ss_dssp             HHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSCCSSCBCTTSCCCCCSHH
T ss_pred             HHHcCCCEEEeeccccccccccccchhhcccccccccccccccccccc-cccccccceeeeccccccccccccccchhhh
Confidence            86  6799999998653221  22233467788888888888887764 67777776553321     223344566779


Q ss_pred             HHHHHHHHHHHHHCCCCEEEEecCcccCCCccccc--------ccceeeccCCcccCCCCCHHHHHHHHHHHHhCCCCcc
Q 016901          232 LLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKE--------THNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSY  303 (380)
Q Consensus       232 ~~sK~~~E~~l~~~g~~~~ivRpg~v~gp~~~~~~--------~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~~~~~  303 (380)
                      +.+|...|+++++.+.+++++||+++|||+..+..        .......  ......+++++|+++++..++++..   
T Consensus       127 ~~~k~~~e~~~~~~~~~~~i~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~D~~~~~~~~~~~~~---  201 (281)
T d1vl0a_         127 GKTKLEGENFVKALNPKYYIVRTAWLYGDGNNFVKTMINLGKTHDELKVV--HDQVGTPTSTVDLARVVLKVIDEKN---  201 (281)
T ss_dssp             HHHHHHHHHHHHHHCSSEEEEEECSEESSSSCHHHHHHHHHHHCSEEEEE--SSCEECCEEHHHHHHHHHHHHHHTC---
T ss_pred             hhhhhHHHHHHHHhCCCccccceeEEeCCCcccccchhhhhccCCceeec--CCceeccchhhhhhhhhhhhhhhcc---
Confidence            99999999999999999999999999999865421        1111111  1234578999999999999998876   


Q ss_pred             CcEEEEecCCCCCcchHHHHHHhcCCCCCCC
Q 016901          304 CKVVEVIAETTAPLTPMEELLAKIPSQRAEP  334 (380)
Q Consensus       304 ~~~~ni~~~~~~s~~~~~e~~~~~~~~~~~~  334 (380)
                      .++||+++++..|..|+++.+.+.+|.....
T Consensus       202 ~g~~~~~~~~~~s~~e~~~~i~~~~g~~~~i  232 (281)
T d1vl0a_         202 YGTFHCTCKGICSWYDFAVEIFRLTGIDVKV  232 (281)
T ss_dssp             CEEEECCCBSCEEHHHHHHHHHHHHCCCCEE
T ss_pred             cCceeEeCCCccchHHHHHHHHHHhCCCceE
Confidence            4699999999999999999999999986543

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.92  E-value=2.1e-25  Score=211.41  Aligned_cols=241  Identities=13%  Similarity=0.070  Sum_probs=169.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ++|+|||||||||||++|++.|+++|++|++++|+..+...+.+...              ..++++++.+|++|++.+.
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~--------------~~~~i~~~~~Dl~d~~~l~   72 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR--------------VADGMQSEIGDIRDQNKLL   72 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT--------------TTTTSEEEECCTTCHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhh--------------cccCCeEEEeeccChHhhh
Confidence            56899999999999999999999999999999998765443332111              1267999999999999999


Q ss_pred             HHhc--CCCEEEEccccCccc--cCCCCCcchhhHHHHHHHHHHHHHcCCC-EEEEEccCCCCCCC------Cchhhhch
Q 016901          159 PALG--NASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVSSLGTNKFG------FPAAILNL  227 (380)
Q Consensus       159 ~a~~--~~d~Vi~~Ag~~~~~--~~~~~~~~~~nv~g~~~ll~a~~~~~v~-r~V~~SS~~~~~~~------~~~~~~~~  227 (380)
                      +++.  .+|+|+|+|+.....  ..++...+.+|+.|+.++++++++.+.. .+++.|+.......      .+..+..+
T Consensus        73 ~~~~~~~~~~v~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p  152 (356)
T d1rkxa_          73 ESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGG  152 (356)
T ss_dssp             HHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCC
T ss_pred             hhhhhchhhhhhhhhccccccccccCCccccccccccchhhhhhhhccccccccccccccccccccccccccccccccCC
Confidence            9886  579999999865321  2234456788999999999999987644 55555554332211      11233456


Q ss_pred             hhHHHHHHHHHHHHHH-------------HCCCCEEEEecCcccCCCcccccc-----------cceeeccCCcccCCCC
Q 016901          228 FWGVLLWKRKAEEALI-------------ASGLPYTIVRPGGMERPTDAYKET-----------HNITLSQEDTLFGGQV  283 (380)
Q Consensus       228 ~~~Y~~sK~~~E~~l~-------------~~g~~~~ivRpg~v~gp~~~~~~~-----------~~~~~~~~~~~~~~~i  283 (380)
                      ...|+.+|...|..++             ..++.++++||+.+|||++.....           ..............++
T Consensus       153 ~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  232 (356)
T d1rkxa_         153 YDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQ  232 (356)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCE
T ss_pred             CCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCceEEeecccccccc
Confidence            6789999999987764             257899999999999997632211           1111122233334679


Q ss_pred             CHHHHHHHHHHHHhCCCC---ccCcE--EEEecCCCCCcchHHHHHHhcCCCCCC
Q 016901          284 SNLQVAELLACMAKNRSL---SYCKV--VEVIAETTAPLTPMEELLAKIPSQRAE  333 (380)
Q Consensus       284 ~~~DvA~~i~~~l~~~~~---~~~~~--~ni~~~~~~s~~~~~e~~~~~~~~~~~  333 (380)
                      |++|++.++..++.+...   ..+..  ++...+...+..++.+.+.+..+....
T Consensus       233 ~v~D~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  287 (356)
T d1rkxa_         233 HVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGAS  287 (356)
T ss_dssp             ETHHHHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCC
T ss_pred             ccccccchhhhhhhhhcccccccccccccccccccccccchhhhhhHHHhCCCcc
Confidence            999999999988876431   11222  233344555778888888888876544

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.92  E-value=1.5e-23  Score=188.64  Aligned_cols=209  Identities=18%  Similarity=0.189  Sum_probs=159.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++|+++||||+++||+++++.|+++|++|++.+|++++++++.+++.                .++.++++|++|++++
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~----------------~~~~~~~~Dv~~~~~v   67 (244)
T d1nffa_           4 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA----------------DAARYVHLDVTQPAQW   67 (244)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG----------------GGEEEEECCTTCHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh----------------CcceEEEeecCCHHHH
Confidence            578999999999999999999999999999999999988777665432                5688999999999888


Q ss_pred             HHHh-------cCCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCCCC
Q 016901          158 EPAL-------GNASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       158 ~~a~-------~~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~~~  220 (380)
                      ++++       +.+|++|||||.......      ++...+++|+.|+..+++++    ++.+-.+||++||....... 
T Consensus        68 ~~~~~~~~~~~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~-  146 (244)
T d1nffa_          68 KAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGT-  146 (244)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-
T ss_pred             HHHHHHHHHHhCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEecccccccccc-
Confidence            7765       579999999996543222      23445889999988887755    45556799999998763321 


Q ss_pred             chhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHH
Q 016901          221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA  293 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~  293 (380)
                           .....|+.+|+..+.+.+       .+|++++.|.||++.+|........     ......+.+..++|+|+++.
T Consensus       147 -----~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~-----~~~~pl~R~~~p~diA~~v~  216 (244)
T d1nffa_         147 -----VACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPED-----IFQTALGRAAEPVEVSNLVV  216 (244)
T ss_dssp             -----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTT-----CSCCSSSSCBCHHHHHHHHH
T ss_pred             -----ccccchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhHH-----HHhccccCCCCHHHHHHHHH
Confidence                 233579999999998776       3799999999999987743221111     11223345789999999999


Q ss_pred             HHHhCC-CCccCcEEEEecCC
Q 016901          294 CMAKNR-SLSYCKVVEVIAET  313 (380)
Q Consensus       294 ~~l~~~-~~~~~~~~ni~~~~  313 (380)
                      .++.+. .+..|+++.+-+|.
T Consensus       217 fL~s~~s~~itG~~i~vDGG~  237 (244)
T d1nffa_         217 YLASDESSYSTGAEFVVDGGT  237 (244)
T ss_dssp             HHHSGGGTTCCSCEEEESTTG
T ss_pred             HHhChhhCCCcCCEEEECCCe
Confidence            999753 34578899887775

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.92  E-value=6.6e-24  Score=191.96  Aligned_cols=218  Identities=13%  Similarity=0.104  Sum_probs=161.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .+++|++|||||+++||+++++.|+++|++|++.+|+.+++++..++++..+             .++..+.+|++|+++
T Consensus         7 ~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g-------------~~~~~~~~Dvt~~~~   73 (251)
T d2c07a1           7 CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFG-------------YESSGYAGDVSKKEE   73 (251)
T ss_dssp             CCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTT-------------CCEEEEECCTTCHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcC-------------CcEEEEEccCCCHHH
Confidence            4578999999999999999999999999999999999999888888776543             578999999999988


Q ss_pred             HHHHh-------cCCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCCC
Q 016901          157 IEPAL-------GNASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       157 ~~~a~-------~~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~~  219 (380)
                      +++++       +.+|++|||||.......      ++...+++|+.++..+++++    ++.+-++||++||...... 
T Consensus        74 v~~~~~~~~~~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~-  152 (251)
T d2c07a1          74 ISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTG-  152 (251)
T ss_dssp             HHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC-
T ss_pred             HHHHHHHHHHhcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCC-
Confidence            87766       579999999986533222      33444789999987777654    4566679999999765221 


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHH
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELL  292 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i  292 (380)
                           ......|+.+|.+.+.+.+       .+|++++.|.||++.++...................+.+..++|+|+++
T Consensus       153 -----~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v  227 (251)
T d2c07a1         153 -----NVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIISNIPAGRMGTPEEVANLA  227 (251)
T ss_dssp             -----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHHHHTTCTTSSCBCHHHHHHHH
T ss_pred             -----CCCCHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccccCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence                 1233579999999998876       3799999999999987742211110111111112234567999999999


Q ss_pred             HHHHhCC-CCccCcEEEEecCC
Q 016901          293 ACMAKNR-SLSYCKVVEVIAET  313 (380)
Q Consensus       293 ~~~l~~~-~~~~~~~~ni~~~~  313 (380)
                      ..++.+. .+..|+++.+-+|-
T Consensus       228 ~fL~S~~s~~itG~~i~vDGG~  249 (251)
T d2c07a1         228 CFLSSDKSGYINGRVFVIDGGL  249 (251)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTS
T ss_pred             HHHhCchhCCCcCcEEEECCCc
Confidence            9998654 33578899887763

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=8.9e-24  Score=190.15  Aligned_cols=214  Identities=14%  Similarity=0.120  Sum_probs=158.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++|+++||||+++||+++++.|+++|++|++.+|++++++++.+++.                .+...+.+|++|.+++
T Consensus         2 l~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~----------------~~~~~~~~Dv~~~~~v   65 (243)
T d1q7ba_           2 FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLG----------------ANGKGLMLNVTDPASI   65 (243)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG----------------GGEEEEECCTTCHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC----------------CCCcEEEEEecCHHHh
Confidence            478999999999999999999999999999999999988887766543                5678899999999888


Q ss_pred             HHHh-------cCCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCCCC
Q 016901          158 EPAL-------GNASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       158 ~~a~-------~~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~~~  220 (380)
                      ++++       +++|++|||||.......      ++...+++|+.++..+++++    ++.+-++||++||......  
T Consensus        66 ~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~--  143 (243)
T d1q7ba_          66 ESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMG--  143 (243)
T ss_dssp             HHHHHHHHHHTCSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC--
T ss_pred             hhhhhhhhcccCCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCC--
Confidence            7765       479999999986533221      33445889999988887766    4555679999999754221  


Q ss_pred             chhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHH
Q 016901          221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA  293 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~  293 (380)
                          ......|+.+|.+.+.+.+       .+|++++.|.||.+.++...................+.+..++|+|+++.
T Consensus       144 ----~~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~  219 (243)
T d1q7ba_         144 ----NGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPAGRLGGAQEIANAVA  219 (243)
T ss_dssp             ----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHTTCTTSSCBCHHHHHHHHH
T ss_pred             ----CCCCHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhhhhhhHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence                1234579999999998766       37999999999999765321100000000111122345679999999999


Q ss_pred             HHHhCC-CCccCcEEEEecCC
Q 016901          294 CMAKNR-SLSYCKVVEVIAET  313 (380)
Q Consensus       294 ~~l~~~-~~~~~~~~ni~~~~  313 (380)
                      .++.+. .+..|+++.+-+|-
T Consensus       220 fL~S~~s~~itGq~i~vdGG~  240 (243)
T d1q7ba_         220 FLASDEAAYITGETLHVNGGM  240 (243)
T ss_dssp             HHHSGGGTTCCSCEEEESTTS
T ss_pred             HHhCchhcCCcCCeEEECCCe
Confidence            999754 33578999888774

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=2.5e-23  Score=188.47  Aligned_cols=218  Identities=12%  Similarity=0.135  Sum_probs=163.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++|++|||||+++||++++++|+++|++|++..|+.++++++.++++..+             .++.++++|++|++++
T Consensus         9 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g-------------~~~~~~~~Dvs~~~~~   75 (255)
T d1fmca_           9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLG-------------GQAFACRCDITSEQEL   75 (255)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTT-------------CCEEEEECCTTCHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcC-------------CcEEEEEccCCCHHHH
Confidence            578999999999999999999999999999999999999988888777643             6788999999999887


Q ss_pred             HHHh-------cCCCEEEEccccCccccC-----CCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCCCCc
Q 016901          158 EPAL-------GNASVVICCIGASEKEVF-----DITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGFP  221 (380)
Q Consensus       158 ~~a~-------~~~d~Vi~~Ag~~~~~~~-----~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~~~~  221 (380)
                      ++++       +++|++|||||.......     ++...+++|+.|+.++.+++    ++.+-.++|++||.......  
T Consensus        76 ~~~~~~~~~~~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~--  153 (255)
T d1fmca_          76 SALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKN--  153 (255)
T ss_dssp             HHHHHHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCC--
T ss_pred             HHHHHHHHHHcCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccc--
Confidence            7765       579999999996543322     23344789999988877755    44555689999997653321  


Q ss_pred             hhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccc-ccccceeeccCCcccCCCCCHHHHHHHHH
Q 016901          222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAY-KETHNITLSQEDTLFGGQVSNLQVAELLA  293 (380)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~-~~~~~~~~~~~~~~~~~~i~~~DvA~~i~  293 (380)
                          .....|+.+|.+.+.+.+       .+|++++.|.||++.++.... ...............+.+..++|+|+++.
T Consensus       154 ----~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~e~~~~~~~~~pl~R~g~pedvA~~v~  229 (255)
T d1fmca_         154 ----INMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAAL  229 (255)
T ss_dssp             ----TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSSCSCBCHHHHHHHHH
T ss_pred             ----cccccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence                233579999999997765       379999999999997763210 00000000011122345678999999999


Q ss_pred             HHHhCC-CCccCcEEEEecCCC
Q 016901          294 CMAKNR-SLSYCKVVEVIAETT  314 (380)
Q Consensus       294 ~~l~~~-~~~~~~~~ni~~~~~  314 (380)
                      .++.+. .+..|+++.+-+|..
T Consensus       230 fL~S~~s~~itG~~i~vDGG~~  251 (255)
T d1fmca_         230 FLCSPAASWVSGQILTVSGGGV  251 (255)
T ss_dssp             HHHSGGGTTCCSCEEEESTTSC
T ss_pred             HHhCchhcCCcCCEEEECcCcc
Confidence            999654 345789999888863

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.90  E-value=1e-22  Score=183.67  Aligned_cols=216  Identities=12%  Similarity=0.076  Sum_probs=152.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ++++|+++||||+++||+++++.|+++|++|++.+|++.+.  ....++..+             .++.++.+|++|+++
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~--~~~~~~~~g-------------~~~~~~~~Dvs~~~~   66 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPE--AEAAIRNLG-------------RRVLTVKCDVSQPGD   66 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHH--HHHHHHHTT-------------CCEEEEECCTTCHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHH--HHHHHHHcC-------------CcEEEEEeeCCCHHH
Confidence            45889999999999999999999999999999999987532  222333322             678999999999988


Q ss_pred             HHHHh-------cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCCC
Q 016901          157 IEPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       157 ~~~a~-------~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~~  219 (380)
                      +++++       +++|++|||||......      .++...+++|+.|+..+.+++    ++.+-.++|++||.......
T Consensus        67 v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~  146 (247)
T d2ew8a1          67 VEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKI  146 (247)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccC
Confidence            87765       57999999999753322      234445889999988877765    45566799999998653321


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccc--cccceeeccCCcccCCCCCHHHHHH
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK--ETHNITLSQEDTLFGGQVSNLQVAE  290 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~--~~~~~~~~~~~~~~~~~i~~~DvA~  290 (380)
                            .....|+.+|.+.+.+.+       .+|++++.|.||++.+|.....  ....-.........+.+..++|+|+
T Consensus       147 ------~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~l~r~~~pedvA~  220 (247)
T d2ew8a1         147 ------EAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTG  220 (247)
T ss_dssp             ------SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------CTTSSSCSCCCTHHHHH
T ss_pred             ------cccccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccchhHHHHHHHhccCCCCCCHHHHHH
Confidence                  233579999999987765       3799999999999987642111  0000111111122334678999999


Q ss_pred             HHHHHHhCC-CCccCcEEEEecCC
Q 016901          291 LLACMAKNR-SLSYCKVVEVIAET  313 (380)
Q Consensus       291 ~i~~~l~~~-~~~~~~~~ni~~~~  313 (380)
                      +++.++.+. .+..|+++.+-+|-
T Consensus       221 ~v~fL~S~~s~~itG~~i~vDGG~  244 (247)
T d2ew8a1         221 AAAFLASDDASFITGQTLAVDGGM  244 (247)
T ss_dssp             HHHHHTSGGGTTCCSCEEEESSSC
T ss_pred             HHHHHhCchhcCCcCCeEEECCCE
Confidence            999998754 33578999887774

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.90  E-value=1.3e-23  Score=198.99  Aligned_cols=224  Identities=17%  Similarity=0.117  Sum_probs=163.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh-cH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV-QI  157 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~-~~  157 (380)
                      +.|+|+|||||||||++|+++|+++||+|++++|++++.....  +.              ..++++++++|++|.. .+
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~--~~--------------~~~~v~~~~gD~~d~~~~~   65 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEE--LQ--------------AIPNVTLFQGPLLNNVPLM   65 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHH--HH--------------TSTTEEEEESCCTTCHHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhh--hc--------------ccCCCEEEEeeCCCcHHHH
Confidence            4689999999999999999999999999999999887643211  11              1268999999999865 46


Q ss_pred             HHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCCchhhhchhhHHHHHHHH
Q 016901          158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRK  237 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~~Y~~sK~~  237 (380)
                      +.++.++|.++++....          ...|+..+.++++++++.|++++|+.||........    ......|..+|..
T Consensus        66 ~~a~~~~~~~~~~~~~~----------~~~~~~~~~~~~~aa~~agv~~~v~~Ss~~~~~~~~----~~~~~~~~~~k~~  131 (350)
T d1xgka_          66 DTLFEGAHLAFINTTSQ----------AGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYG----PWPAVPMWAPKFT  131 (350)
T ss_dssp             HHHHTTCSEEEECCCST----------TSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTS----SCCCCTTTHHHHH
T ss_pred             HHHhcCCceEEeecccc----------cchhhhhhhHHHHHHHHhCCCceEEEeeccccccCC----cccchhhhhhHHH
Confidence            78889999999876432          234788899999999999988888888865422111    1122347789999


Q ss_pred             HHHHHHHCCCCEEEEecCcccCCCcccc---------cccc--eeeccCCcccCCCCCH-HHHHHHHHHHHhCC-CCccC
Q 016901          238 AEEALIASGLPYTIVRPGGMERPTDAYK---------ETHN--ITLSQEDTLFGGQVSN-LQVAELLACMAKNR-SLSYC  304 (380)
Q Consensus       238 ~E~~l~~~g~~~~ivRpg~v~gp~~~~~---------~~~~--~~~~~~~~~~~~~i~~-~DvA~~i~~~l~~~-~~~~~  304 (380)
                      .|+++++.+++++++||+.++++.....         ....  ............+++. +|+++++..++.++ +...|
T Consensus       132 ~~~~~~~~~~~~~~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~~~~~~G  211 (350)
T d1xgka_         132 VENYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNG  211 (350)
T ss_dssp             HHHHHHTSSSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTT
T ss_pred             HHHHHHhhccCceeeeeceeeccccccccccccccccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhCChhhcCC
Confidence            9999999999999999999876421110         0000  1111111112235665 79999999998764 32458


Q ss_pred             cEEEEecCCCCCcchHHHHHHhcCCCCCC
Q 016901          305 KVVEVIAETTAPLTPMEELLAKIPSQRAE  333 (380)
Q Consensus       305 ~~~ni~~~~~~s~~~~~e~~~~~~~~~~~  333 (380)
                      ++|+++++ ..|..|+++++.+++|++..
T Consensus       212 ~~~~~~g~-~~T~~eia~~l~~~~G~~v~  239 (350)
T d1xgka_         212 HRIALTFE-TLSPVQVCAAFSRALNRRVT  239 (350)
T ss_dssp             CEEEECSE-EECHHHHHHHHHHHHTSCEE
T ss_pred             eEEEEeCC-cCCHHHHHHHHHHHHCCcce
Confidence            89998875 58999999999999998654

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.90  E-value=6.9e-23  Score=185.30  Aligned_cols=216  Identities=13%  Similarity=0.040  Sum_probs=156.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++|++|||||+++||++++++|+++|++|++.+|+.++.++..+++   +             .++.++++|++|.+++
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~---~-------------~~~~~~~~Dv~~~~~v   66 (254)
T d1hdca_           3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---G-------------DAARYQHLDVTIEEDW   66 (254)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---G-------------GGEEEEECCTTCHHHH
T ss_pred             CCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---C-------------CceEEEEcccCCHHHH
Confidence            47899999999999999999999999999999999988776654422   1             5788999999999888


Q ss_pred             HHHh-------cCCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCCCC
Q 016901          158 EPAL-------GNASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       158 ~~a~-------~~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~~~  220 (380)
                      ++++       +++|++|||||.......      ++...+++|+.++..+++++    ++.+-.+||++||....... 
T Consensus        67 ~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~-  145 (254)
T d1hdca_          67 QRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGL-  145 (254)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-
T ss_pred             HHHHHHHHHHcCCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccc-
Confidence            7766       579999999996533221      23345889999988887765    45566799999998663321 


Q ss_pred             chhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCC-CCHHHHHHHH
Q 016901          221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQ-VSNLQVAELL  292 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~-i~~~DvA~~i  292 (380)
                           .....|+.+|.+.+.+.+       .+|++++.|.||++..|...................+.+ ..++|+|+++
T Consensus       146 -----~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~g~~PedvA~~v  220 (254)
T d1hdca_         146 -----ALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAV  220 (254)
T ss_dssp             -----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCSTTSCTTSTTSSCB-CHHHHHHHH
T ss_pred             -----cchhhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCccchhcCHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence                 233579999999997765       378999999999998763211000000000111112222 3589999999


Q ss_pred             HHHHhCC-CCccCcEEEEecCCCC
Q 016901          293 ACMAKNR-SLSYCKVVEVIAETTA  315 (380)
Q Consensus       293 ~~~l~~~-~~~~~~~~ni~~~~~~  315 (380)
                      +.++.+. .+..|+++.+-+|-..
T Consensus       221 ~fL~S~~a~~itG~~i~vDGG~t~  244 (254)
T d1hdca_         221 VKLLSDTSSYVTGAELAVDGGWTT  244 (254)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTTTT
T ss_pred             HHHhchhhCCCCCceEEeCCCccC
Confidence            9999654 3357899998887543

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.90  E-value=6e-23  Score=185.54  Aligned_cols=219  Identities=13%  Similarity=0.158  Sum_probs=159.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++|++|||||+++||+++++.|+++|++|++.+|+.++..+..+++.+..        +    .++.++++|++|++++
T Consensus         3 l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~--------g----~~~~~~~~Dv~~~~~v   70 (251)
T d1vl8a_           3 LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY--------G----VETMAFRCDVSNYEEV   70 (251)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH--------C----CCEEEEECCTTCHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHh--------C----CcEEEEEccCCCHHHH
Confidence            578999999999999999999999999999999999988877766553321        1    5788999999999887


Q ss_pred             HHHh-------cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCCCC
Q 016901          158 EPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       158 ~~a~-------~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~~~  220 (380)
                      ++++       +++|++|||||......      .++...+++|+.|+..+.+++.    +.+-+++|++||......+.
T Consensus        71 ~~~~~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~  150 (251)
T d1vl8a_          71 KKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTM  150 (251)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCS
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccC
Confidence            7765       57999999999653322      1334448899999888877653    45567999999865433221


Q ss_pred             chhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccc--cccceeeccCCcccCCCCCHHHHHHH
Q 016901          221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK--ETHNITLSQEDTLFGGQVSNLQVAEL  291 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~--~~~~~~~~~~~~~~~~~i~~~DvA~~  291 (380)
                           .....|+.+|.+.+.+.+       .+|++++.|.||++.++.....  ..............+.+..++|+|++
T Consensus       151 -----~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~  225 (251)
T d1vl8a_         151 -----PNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGV  225 (251)
T ss_dssp             -----SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHHH
T ss_pred             -----ccccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhcCCCCCCCCHHHHHHH
Confidence                 123469999999998765       3799999999999988743211  00010001111223456789999999


Q ss_pred             HHHHHhCCC-CccCcEEEEecCC
Q 016901          292 LACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       292 i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      ++.++.+.. +..|+++.+-+|-
T Consensus       226 v~fL~S~~a~~itG~~i~vDGG~  248 (251)
T d1vl8a_         226 AVFLASEEAKYVTGQIIFVDGGW  248 (251)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHhCchhCCCcCcEEEeCcCe
Confidence            999987543 3578888887763

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.90  E-value=6.8e-23  Score=185.82  Aligned_cols=216  Identities=12%  Similarity=0.124  Sum_probs=159.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++|+++||||+++||+++++.|+++|++|++.+|+.++++++.+++.                .++..+++|++|++++
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~----------------~~~~~~~~Dvt~~~~v   66 (256)
T d1k2wa_           3 LDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIG----------------PAACAIALDVTDQASI   66 (256)
T ss_dssp             TTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHC----------------TTEEEEECCTTCHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC----------------CceEEEEeeCCCHHHH
Confidence            578999999999999999999999999999999999888777665431                6788999999999888


Q ss_pred             HHHh-------cCCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHHH----Hc-CCCEEEEEccCCCCCCC
Q 016901          158 EPAL-------GNASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAAT----IA-KVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       158 ~~a~-------~~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~~----~~-~v~r~V~~SS~~~~~~~  219 (380)
                      ++++       +++|++|||||.......      ++...+++|+.|+..+++++.    +. .-.+||++||.+.....
T Consensus        67 ~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~  146 (256)
T d1k2wa_          67 DRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGE  146 (256)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC
T ss_pred             HHHHHHHHHHhCCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhcccc
Confidence            8776       579999999996533222      234448899999988887642    22 34699999998764321


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccc-----ccccee------eccCCcccCC
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-----ETHNIT------LSQEDTLFGG  281 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~-----~~~~~~------~~~~~~~~~~  281 (380)
                            .....|+.+|.+.+.+.+       .+|++++.|.||++.+|.....     ......      ........+.
T Consensus       147 ------~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR  220 (256)
T d1k2wa_         147 ------ALVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGR  220 (256)
T ss_dssp             ------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSS
T ss_pred             ------ccccchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcCCCCC
Confidence                  233579999999998775       3799999999999988742110     000000      0011112345


Q ss_pred             CCCHHHHHHHHHHHHhCCC-CccCcEEEEecCCCC
Q 016901          282 QVSNLQVAELLACMAKNRS-LSYCKVVEVIAETTA  315 (380)
Q Consensus       282 ~i~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~~~  315 (380)
                      +..++|+|.++..++.+.. +..|+++.+-+|..+
T Consensus       221 ~~~p~evA~~v~fL~S~~a~~iTG~~i~vDGG~~m  255 (256)
T d1k2wa_         221 MGRAEDLTGMAIFLATPEADYIVAQTYNVDGGNWM  255 (256)
T ss_dssp             CBCHHHHHHHHHHTTSGGGTTCCSCEEEESTTSSC
T ss_pred             CcCHHHHHHHHHHHhCchhCCccCceEEECcchhh
Confidence            6899999999999886543 357899999888654

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.90  E-value=9.1e-23  Score=184.40  Aligned_cols=216  Identities=14%  Similarity=0.088  Sum_probs=157.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++|++|||||+++||+++++.|+++|++|++.+|+.++.++..+.+..              ..++.++++|++|++++
T Consensus         4 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~--------------~~~~~~~~~Dv~~~~~v   69 (251)
T d1zk4a1           4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT--------------PDQIQFFQHDSSDEDGW   69 (251)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC--------------TTTEEEEECCTTCHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC--------------CCcEEEEEccCCCHHHH
Confidence            5789999999999999999999999999999999999888776665431              15789999999999887


Q ss_pred             HHHh-------cCCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHHH----HcCCC-EEEEEccCCCCCCC
Q 016901          158 EPAL-------GNASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAAT----IAKVN-HFIMVSSLGTNKFG  219 (380)
Q Consensus       158 ~~a~-------~~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~~----~~~v~-r~V~~SS~~~~~~~  219 (380)
                      ++++       +++|++|||||.......      ++...+++|+.|+..+++++.    +.+.+ ++|++||.......
T Consensus        70 ~~~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~  149 (251)
T d1zk4a1          70 TKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGD  149 (251)
T ss_dssp             HHHHHHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCC
T ss_pred             HHHHHHHHHHhCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccC
Confidence            7665       579999999996543221      233458899999988887764    44444 89999997653221


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHH---------HCCCCEEEEecCcccCCCccc-ccccceeeccCCcccCCCCCHHHHH
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALI---------ASGLPYTIVRPGGMERPTDAY-KETHNITLSQEDTLFGGQVSNLQVA  289 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~---------~~g~~~~ivRpg~v~gp~~~~-~~~~~~~~~~~~~~~~~~i~~~DvA  289 (380)
                            .....|+.+|...+.+.+         .+|++++.|.||.+.+|.... ...............+.+..++|+|
T Consensus       150 ------~~~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA  223 (251)
T d1zk4a1         150 ------PSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIA  223 (251)
T ss_dssp             ------TTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHTSTTTCTTSSCBCHHHHH
T ss_pred             ------CCchhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCHHHHHHHHhCCCCCCCcCHHHHH
Confidence                  223579999999876543         368999999999998763211 1000111111122334567999999


Q ss_pred             HHHHHHHhCCC-CccCcEEEEecCC
Q 016901          290 ELLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       290 ~~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      +++..++.+.. +..|+++.+-+|-
T Consensus       224 ~~v~fL~S~~s~~itG~~i~vDGG~  248 (251)
T d1zk4a1         224 YICVYLASNESKFATGSEFVVDGGY  248 (251)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHhCchhCCCcCcEEEECccc
Confidence            99999986543 3578888887763

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.90  E-value=4.9e-23  Score=186.90  Aligned_cols=220  Identities=14%  Similarity=0.090  Sum_probs=161.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++|+++||||+++||+++++.|+++|++|++.+|+.+++++...++.....           ..++..+++|++|++++
T Consensus         2 l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~-----------~~~~~~~~~Dvt~~~~v   70 (258)
T d1iy8a_           2 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAP-----------DAEVLTTVADVSDEAQV   70 (258)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCT-----------TCCEEEEECCTTSHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCC-----------CCeEEEEeccCCCHHHH
Confidence            4789999999999999999999999999999999999988877776654321           14788999999999888


Q ss_pred             HHHh-------cCCCEEEEccccCcc-c-c-----CCCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCCC
Q 016901          158 EPAL-------GNASVVICCIGASEK-E-V-----FDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       158 ~~a~-------~~~d~Vi~~Ag~~~~-~-~-----~~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~~  219 (380)
                      ++++       +++|++|||||.... . .     .++...+++|+.|+.++.+++    ++.+-.+||++||...... 
T Consensus        71 ~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~-  149 (258)
T d1iy8a_          71 EAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRG-  149 (258)
T ss_dssp             HHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSB-
T ss_pred             HHHHHHHHHHhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccC-
Confidence            7765       579999999995421 1 1     133445889999998888765    4456679999999766331 


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccc--cc---ccc---eeeccCCcccCCCCC
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAY--KE---THN---ITLSQEDTLFGGQVS  284 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~--~~---~~~---~~~~~~~~~~~~~i~  284 (380)
                           ......|+.+|.+.+.+.+       .+|++++.|.||.+.+|....  ..   ...   ..........+.+..
T Consensus       150 -----~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~  224 (258)
T d1iy8a_         150 -----IGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGE  224 (258)
T ss_dssp             -----CSSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBC
T ss_pred             -----CCCchHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCCCCCcC
Confidence                 1234579999999987765       379999999999998763110  00   000   000011122345679


Q ss_pred             HHHHHHHHHHHHhCC-CCccCcEEEEecCCC
Q 016901          285 NLQVAELLACMAKNR-SLSYCKVVEVIAETT  314 (380)
Q Consensus       285 ~~DvA~~i~~~l~~~-~~~~~~~~ni~~~~~  314 (380)
                      ++|+|+++..++.+. .+..|+++.+-+|..
T Consensus       225 p~dvA~~v~fL~S~~s~~itG~~i~VDGG~s  255 (258)
T d1iy8a_         225 APEIAAVVAFLLSDDASYVNATVVPIDGGQS  255 (258)
T ss_dssp             HHHHHHHHHHHTSGGGTTCCSCEEEESTTTT
T ss_pred             HHHHHHHHHHHhCchhcCCcCceEEcCcchh
Confidence            999999999999753 335788998888764

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=2.6e-23  Score=187.78  Aligned_cols=214  Identities=15%  Similarity=0.132  Sum_probs=157.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ++++|++|||||+++||+++++.|+++|++|++++|++++++++.+++                 +++.++.+|++|.++
T Consensus         3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~-----------------~~~~~~~~Dvs~~~~   65 (250)
T d1ydea1           3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL-----------------PGAVFILCDVTQEDD   65 (250)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-----------------TTEEEEECCTTSHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc-----------------CCCeEEEccCCCHHH
Confidence            458999999999999999999999999999999999988877665422                 568899999999988


Q ss_pred             HHHHh-------cCCCEEEEccccCcc-c-c-----CCCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCC
Q 016901          157 IEPAL-------GNASVVICCIGASEK-E-V-----FDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKF  218 (380)
Q Consensus       157 ~~~a~-------~~~d~Vi~~Ag~~~~-~-~-----~~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~  218 (380)
                      +++++       +++|++|||||.... . .     .++...+++|+.|+.++++++.    +.+ .++|++||......
T Consensus        66 v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G~Ii~isS~~~~~~  144 (250)
T d1ydea1          66 VKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ-GNVINISSLVGAIG  144 (250)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCHHHHHC
T ss_pred             HHHHHHHHHHhcCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCC-CCCccccccccccc
Confidence            87765       579999999995422 1 1     1234458899999888887653    433 68999999754221


Q ss_pred             CCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccc-ccc-----cceeeccCCcccCCCCCH
Q 016901          219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAY-KET-----HNITLSQEDTLFGGQVSN  285 (380)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~-~~~-----~~~~~~~~~~~~~~~i~~  285 (380)
                            ......|+.+|.+.+.+.+       .+|++++.|.||+|.+|.... ...     ..+.-.......+.+..+
T Consensus       145 ------~~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p  218 (250)
T d1ydea1         145 ------QAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQP  218 (250)
T ss_dssp             ------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCH
T ss_pred             ------ccCcchhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCH
Confidence                  1234579999999998765       379999999999997653110 000     000000111223457899


Q ss_pred             HHHHHHHHHHHhCCCCccCcEEEEecCCC
Q 016901          286 LQVAELLACMAKNRSLSYCKVVEVIAETT  314 (380)
Q Consensus       286 ~DvA~~i~~~l~~~~~~~~~~~ni~~~~~  314 (380)
                      +|+|+++..++.+..+..|+++.+-+|..
T Consensus       219 ~eva~~v~fL~Sda~~itG~~i~vDGG~~  247 (250)
T d1ydea1         219 AEVGAAAVFLASEANFCTGIELLVTGGAE  247 (250)
T ss_dssp             HHHHHHHHHHHHHCTTCCSCEEEESTTTT
T ss_pred             HHHHHHHHHHhCccCCCcCCeEEECCCcc
Confidence            99999999998654456789998887753

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.90  E-value=1.7e-22  Score=184.38  Aligned_cols=225  Identities=15%  Similarity=0.190  Sum_probs=163.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ++++|++|||||+++||++++++|+++|++|++++|+.++++++.+++...              ..+.++.+|++|+++
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~--------------~~~~~~~~Dv~~~~~   68 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP--------------DVISFVHCDVTKDED   68 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT--------------TTEEEEECCTTCHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCC--------------CceEEEEccCCCHHH
Confidence            468899999999999999999999999999999999998888776655321              568889999999988


Q ss_pred             HHHHh-------cCCCEEEEccccCccccC--------CCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCC
Q 016901          157 IEPAL-------GNASVVICCIGASEKEVF--------DITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNK  217 (380)
Q Consensus       157 ~~~a~-------~~~d~Vi~~Ag~~~~~~~--------~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~  217 (380)
                      +++++       +.+|++|||||.......        ++...+++|+.|+..+.+++    .+.+-.++|++||.....
T Consensus        69 v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~  148 (268)
T d2bgka1          69 VRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFT  148 (268)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTC
T ss_pred             HHHHHHHHHHHcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccc
Confidence            88776       579999999996533211        22334789999988877765    345567999999976543


Q ss_pred             CCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccc-cccce----eeccCCcccCCCCCH
Q 016901          218 FGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-ETHNI----TLSQEDTLFGGQVSN  285 (380)
Q Consensus       218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~-~~~~~----~~~~~~~~~~~~i~~  285 (380)
                      ...+     ....|+.+|.+.+.+.+       .+|++++.|.||++.+|..... .....    .........+.+..+
T Consensus       149 ~~~~-----~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~p  223 (268)
T d2bgka1         149 AGEG-----VSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRA  223 (268)
T ss_dssp             CCTT-----SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCH
T ss_pred             cccc-----cccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccccCCCCcCH
Confidence            2211     12359999999998776       3799999999999988742110 00000    001111233456899


Q ss_pred             HHHHHHHHHHHhCC-CCccCcEEEEecCCCCCcchH
Q 016901          286 LQVAELLACMAKNR-SLSYCKVVEVIAETTAPLTPM  320 (380)
Q Consensus       286 ~DvA~~i~~~l~~~-~~~~~~~~ni~~~~~~s~~~~  320 (380)
                      +|+|++++.++.+. .+..|+++.+-+|-..+...+
T Consensus       224 edvA~~v~fL~S~~s~~itGq~i~VDGG~t~~~p~~  259 (268)
T d2bgka1         224 EDVADAVAYLAGDESKYVSGLNLVIDGGYTRTNPAF  259 (268)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCCTHH
T ss_pred             HHHHHHHHHHhChhhCCccCceEEECcCcccCCCCC
Confidence            99999999999754 345799999988865444333

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.90  E-value=1.6e-22  Score=181.76  Aligned_cols=212  Identities=16%  Similarity=0.082  Sum_probs=155.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++|++|||||+++||+++++.|+++|++|++.+|+++++++..+.                  -+.+++.+|++|++++
T Consensus         3 L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~------------------~~~~~~~~Dv~~~~~v   64 (242)
T d1ulsa_           3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEA------------------VGAHPVVMDVADPASV   64 (242)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT------------------TTCEEEECCTTCHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH------------------cCCeEEEEecCCHHHH
Confidence            5789999999999999999999999999999999998877665431                  3577899999999888


Q ss_pred             HHHh-------cCCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCCCC
Q 016901          158 EPAL-------GNASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       158 ~~a~-------~~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~~~  220 (380)
                      ++++       +++|++|||||.......      ++...+++|+.|+..+.+++.    +.+-.+++++||.+...   
T Consensus        65 ~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~~~---  141 (242)
T d1ulsa_          65 ERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLG---  141 (242)
T ss_dssp             HHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGC---
T ss_pred             HHHHHHHHHhcCCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccccccC---
Confidence            8765       479999999996533221      334458899999988887764    34455777877754321   


Q ss_pred             chhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHH
Q 016901          221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA  293 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~  293 (380)
                          ......|+.+|.+.+.+.+       .+|++++.|.||.+..|...................+.+..++|+|+++.
T Consensus       142 ----~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v~  217 (242)
T d1ulsa_         142 ----NLGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVREKAIAATPLGRAGKPLEVAYAAL  217 (242)
T ss_dssp             ----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHHHHHHHHTCTTCSCBCHHHHHHHHH
T ss_pred             ----CCCCcchHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCCHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence                1234579999999998765       37899999999999877432111100001111122345679999999999


Q ss_pred             HHHhCC-CCccCcEEEEecCCC
Q 016901          294 CMAKNR-SLSYCKVVEVIAETT  314 (380)
Q Consensus       294 ~~l~~~-~~~~~~~~ni~~~~~  314 (380)
                      .++.+. .+..|+++.+-+|..
T Consensus       218 fL~S~~s~~itG~~i~vDGG~t  239 (242)
T d1ulsa_         218 FLLSDESSFITGQVLFVDGGRT  239 (242)
T ss_dssp             HHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHhchhhCCCCCcEEEECCCcc
Confidence            999753 335789998887753

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.4e-22  Score=182.41  Aligned_cols=212  Identities=16%  Similarity=0.130  Sum_probs=156.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++|++|||||+++||+++++.|+++|++|++.+|+.++++++.+++                 .++..+.+|++|.+++
T Consensus         5 L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~-----------------~~~~~~~~Dv~d~~~v   67 (244)
T d1pr9a_           5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC-----------------PGIEPVCVDLGDWEAT   67 (244)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS-----------------TTCEEEECCTTCHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhc-----------------CCCeEEEEeCCCHHHH
Confidence            58899999999999999999999999999999999988877665422                 4688899999999999


Q ss_pred             HHHh---cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHH-----HcCCCEEEEEccCCCCCCCCchh
Q 016901          158 EPAL---GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT-----IAKVNHFIMVSSLGTNKFGFPAA  223 (380)
Q Consensus       158 ~~a~---~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~-----~~~v~r~V~~SS~~~~~~~~~~~  223 (380)
                      ++++   +++|++|||||......      .++...+++|+.++..+.+++.     +.+..++|++||.......    
T Consensus        68 ~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~----  143 (244)
T d1pr9a_          68 ERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAV----  143 (244)
T ss_dssp             HHHHTTCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC----
T ss_pred             HHHHHHhCCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccc----
Confidence            8887   46899999998654322      2334458899999888777653     2345699999997663321    


Q ss_pred             hhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccc--cccceeeccCCcccCCCCCHHHHHHHHHH
Q 016901          224 ILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK--ETHNITLSQEDTLFGGQVSNLQVAELLAC  294 (380)
Q Consensus       224 ~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~--~~~~~~~~~~~~~~~~~i~~~DvA~~i~~  294 (380)
                        .....|+.+|.+.+.+.+       .+|++++.|.||.+..|.....  ..............+.+..++|+|+++..
T Consensus       144 --~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~f  221 (244)
T d1pr9a_         144 --TNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILF  221 (244)
T ss_dssp             --TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCTTCSCBCHHHHHHHHHH
T ss_pred             --cchhhhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence              223569999999998776       3799999999999987632110  00000001112223457899999999999


Q ss_pred             HHhCC-CCccCcEEEEecC
Q 016901          295 MAKNR-SLSYCKVVEVIAE  312 (380)
Q Consensus       295 ~l~~~-~~~~~~~~ni~~~  312 (380)
                      ++.+. .+..|+++.+-+|
T Consensus       222 L~S~~a~~itG~~i~vDGG  240 (244)
T d1pr9a_         222 LLSDRSGMTTGSTLPVEGG  240 (244)
T ss_dssp             HHSGGGTTCCSCEEEESTT
T ss_pred             HhCchhCCcCCcEEEECcc
Confidence            98754 3457888888766

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.90  E-value=1.4e-22  Score=184.00  Aligned_cols=218  Identities=16%  Similarity=0.121  Sum_probs=161.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ++++|++|||||+++||+++++.|+++|++|++.+|+.+++++..+++...+             .++.++.+|++|+++
T Consensus         5 ~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g-------------~~~~~~~~Dv~~~~~   71 (259)
T d2ae2a_           5 NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKG-------------FKVEASVCDLSSRSE   71 (259)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------------CEEEEEECCTTCHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-------------CCceEEEeeCCCHHH
Confidence            4589999999999999999999999999999999999999888887776543             578899999999888


Q ss_pred             HHHHh-------c-CCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCC
Q 016901          157 IEPAL-------G-NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKF  218 (380)
Q Consensus       157 ~~~a~-------~-~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~  218 (380)
                      +++++       . .+|++|||||......      .++...+++|+.|+..+.+++    ++.+-.++|++||......
T Consensus        72 v~~~~~~~~~~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~  151 (259)
T d2ae2a_          72 RQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALA  151 (259)
T ss_dssp             HHHHHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSC
T ss_pred             HHHHHHHHHHHhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccc
Confidence            77665       3 4899999999653322      123445889999988877765    4555679999999765332


Q ss_pred             CCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccccc-----ccceeeccCCcccCCCCCHH
Q 016901          219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE-----THNITLSQEDTLFGGQVSNL  286 (380)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~-----~~~~~~~~~~~~~~~~i~~~  286 (380)
                      .      .....|+.+|...+.+.+       .+|++++.|.||++.+|......     .............+.+..++
T Consensus       152 ~------~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~pe  225 (259)
T d2ae2a_         152 V------PYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPK  225 (259)
T ss_dssp             C------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHH
T ss_pred             c------ccccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCCCCcCHH
Confidence            1      233579999999998876       37899999999999776321100     00000001112234567899


Q ss_pred             HHHHHHHHHHhCC-CCccCcEEEEecCC
Q 016901          287 QVAELLACMAKNR-SLSYCKVVEVIAET  313 (380)
Q Consensus       287 DvA~~i~~~l~~~-~~~~~~~~ni~~~~  313 (380)
                      |+|++++.++.+. .+..|+++.+-+|-
T Consensus       226 dvA~~v~fL~S~~s~~itG~~i~VDGG~  253 (259)
T d2ae2a_         226 ELAAMVAFLCFPAASYVTGQIIYVDGGL  253 (259)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHHhCchhCCCcCcEEEECCCe
Confidence            9999999999754 33578888887764

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.90  E-value=1.2e-22  Score=184.48  Aligned_cols=218  Identities=16%  Similarity=0.136  Sum_probs=148.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ++++|++|||||+++||+++++.|+++|++|++++|+++++++..+++...+             .++..+.+|++|.++
T Consensus         5 ~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~-------------~~~~~~~~Dv~~~~~   71 (259)
T d1xq1a_           5 SLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKG-------------FQVTGSVCDASLRPE   71 (259)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------------CCEEEEECCTTSHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-------------CceEEEeccCCCHHH
Confidence            4588999999999999999999999999999999999998888877765432             578999999999887


Q ss_pred             HHHHh--------cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCC
Q 016901          157 IEPAL--------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKF  218 (380)
Q Consensus       157 ~~~a~--------~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~  218 (380)
                      +++++        +.+|++|||||......      .++...+++|+.|+..+++++    ++.+-.++|++||......
T Consensus        72 v~~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~  151 (259)
T d1xq1a_          72 REKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVS  151 (259)
T ss_dssp             HHHHHHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC-------
T ss_pred             HHHHHHHHHHHhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccccccccccccccccccc
Confidence            76654        34899999999653322      233445889999988877765    4556679999999765322


Q ss_pred             CCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccc-ccccceeeccCCcccCCCCCHHHHHH
Q 016901          219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAY-KETHNITLSQEDTLFGGQVSNLQVAE  290 (380)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~-~~~~~~~~~~~~~~~~~~i~~~DvA~  290 (380)
                      .      .....|+.+|.+.+.+.+       .+|++++.|.||++.+|.... ...............+.+..++|+|.
T Consensus       152 ~------~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~  225 (259)
T d1xq1a_         152 A------SVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSS  225 (259)
T ss_dssp             ---------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-------------------------CCGGGGHH
T ss_pred             c------cccccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchHHHHHHHHhCCCCCCCcCHHHHHH
Confidence            1      223469999999998765       379999999999998774211 11111111111122344678999999


Q ss_pred             HHHHHHhCC-CCccCcEEEEecCC
Q 016901          291 LLACMAKNR-SLSYCKVVEVIAET  313 (380)
Q Consensus       291 ~i~~~l~~~-~~~~~~~~ni~~~~  313 (380)
                      +++.++.+. .+..|+++.+-+|-
T Consensus       226 ~v~fL~S~~s~~iTG~~i~vDGG~  249 (259)
T d1xq1a_         226 LVAFLCMPAASYITGQTICVDGGL  249 (259)
T ss_dssp             HHHHHTSGGGTTCCSCEEECCCCE
T ss_pred             HHHHHhCchhcCCcCcEEEeCCCE
Confidence            999998653 33568888887764

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.90  E-value=2e-22  Score=181.75  Aligned_cols=211  Identities=12%  Similarity=0.020  Sum_probs=153.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++|++|||||+++||+++++.|+++|++|++.+|+++..+...+                   .+..++++|++|.+++
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~-------------------~~~~~~~~Dv~~~~~v   63 (248)
T d2d1ya1           3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEA-------------------IGGAFFQVDLEDERER   63 (248)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHH-------------------HTCEEEECCTTCHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-------------------cCCeEEEEeCCCHHHH
Confidence            478999999999999999999999999999999999775432211                   2456789999999887


Q ss_pred             HHHh-------cCCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCCCC
Q 016901          158 EPAL-------GNASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       158 ~~a~-------~~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~~~  220 (380)
                      ++++       +++|++|||||.......      ++...+++|+.|+.++.+++    ++.+-.+||++||....... 
T Consensus        64 ~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~-  142 (248)
T d2d1ya1          64 VRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAE-  142 (248)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBC-
T ss_pred             HHHHHHHHHhcCCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccc-
Confidence            7765       579999999996533222      23345889999988888776    44556799999998764321 


Q ss_pred             chhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccc-----c-ccceeeccCCcccCCCCCHHH
Q 016901          221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-----E-THNITLSQEDTLFGGQVSNLQ  287 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~-----~-~~~~~~~~~~~~~~~~i~~~D  287 (380)
                           .....|+.+|+..+.+.+       .+|++++.|.||++.+|.....     . .............+.+..++|
T Consensus       143 -----~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~ped  217 (248)
T d2d1ya1         143 -----QENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEE  217 (248)
T ss_dssp             -----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHH
T ss_pred             -----cccchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCCCCCCcCHHH
Confidence                 234579999999998765       3799999999999987632110     0 000011111222345679999


Q ss_pred             HHHHHHHHHhCC-CCccCcEEEEecCC
Q 016901          288 VAELLACMAKNR-SLSYCKVVEVIAET  313 (380)
Q Consensus       288 vA~~i~~~l~~~-~~~~~~~~ni~~~~  313 (380)
                      +|+++..++.+. .+..|+++.+-+|-
T Consensus       218 ia~~v~fL~S~~s~~itG~~i~vDGG~  244 (248)
T d2d1ya1         218 VAEAVLFLASEKASFITGAILPVDGGM  244 (248)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHhCchhcCCCCcEEEcCcCc
Confidence            999999999754 33578899887774

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.90  E-value=1.2e-22  Score=184.24  Aligned_cols=215  Identities=17%  Similarity=0.171  Sum_probs=161.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      +|++|||||+++||+++++.|+++|++|++.+|+++++++..++++..+             .++.++++|++|++++++
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g-------------~~~~~~~~Dvs~~~~v~~   68 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG-------------VEADGRTCDVRSVPEIEA   68 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------------CCEEEEECCTTCHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-------------CcEEEEEeecCCHHHHHH
Confidence            6789999999999999999999999999999999999988888776543             578999999999988877


Q ss_pred             Hh-------cCCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHHHH------cCCCEEEEEccCCCCCCCC
Q 016901          160 AL-------GNASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAATI------AKVNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       160 a~-------~~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~~~------~~v~r~V~~SS~~~~~~~~  220 (380)
                      ++       +++|++|||||.......      ++...+++|+.|+.++++++..      .+..++|++||....... 
T Consensus        69 ~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~-  147 (257)
T d2rhca1          69 LVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGV-  147 (257)
T ss_dssp             HHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCC-
T ss_pred             HHHHHHHHhCCCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCccccccccccccccc-
Confidence            65       469999999996533221      2344588999999999988753      345689999997653321 


Q ss_pred             chhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccc-----cccce------eeccCCcccCCC
Q 016901          221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-----ETHNI------TLSQEDTLFGGQ  282 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~-----~~~~~------~~~~~~~~~~~~  282 (380)
                           .....|+.+|.+.+.+.+       .+|++++.|.||++.+|.....     .....      .........+.+
T Consensus       148 -----~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~PlgR~  222 (257)
T d2rhca1         148 -----VHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRY  222 (257)
T ss_dssp             -----TTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTSSC
T ss_pred             -----ccchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCCCC
Confidence                 233579999999998876       2789999999999977632100     00000      000111223456


Q ss_pred             CCHHHHHHHHHHHHhCC-CCccCcEEEEecCC
Q 016901          283 VSNLQVAELLACMAKNR-SLSYCKVVEVIAET  313 (380)
Q Consensus       283 i~~~DvA~~i~~~l~~~-~~~~~~~~ni~~~~  313 (380)
                      ..++|+|+++..++.+. ....|+++.+-+|-
T Consensus       223 ~~pedia~~v~fL~S~~s~~itG~~i~vDGG~  254 (257)
T d2rhca1         223 VQPSEVAEMVAYLIGPGAAAVTAQALNVCGGL  254 (257)
T ss_dssp             BCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             cCHHHHHHHHHHHhCchhcCCcCceEEECcCc
Confidence            89999999999999653 33578899887764

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.90  E-value=6.5e-23  Score=183.69  Aligned_cols=207  Identities=14%  Similarity=0.072  Sum_probs=150.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ++++|++|||||+++||+++++.|+++|++|++..|+.+..                        .++..+++|++|+++
T Consensus         4 sl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~------------------------~~~~~~~~Dv~~~~~   59 (237)
T d1uzma1           4 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP------------------------KGLFGVEVDVTDSDA   59 (237)
T ss_dssp             CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC------------------------TTSEEEECCTTCHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchh------------------------cCceEEEEecCCHHH
Confidence            46889999999999999999999999999999999986532                        467789999999988


Q ss_pred             HHHHh-------cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHH----HHHcCCCEEEEEccCCCCCCC
Q 016901          157 IEPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDA----ATIAKVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       157 ~~~a~-------~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a----~~~~~v~r~V~~SS~~~~~~~  219 (380)
                      +++++       +++|++|||||......      .++...+++|+.++..+.++    +++.+-++||++||.......
T Consensus        60 v~~~~~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~  139 (237)
T d1uzma1          60 VDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGI  139 (237)
T ss_dssp             HHHHHHHHHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC----
T ss_pred             HHHHHHHHHHhcCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCC
Confidence            87765       47999999999653221      23344588999998777654    456666799999998663321


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHH
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELL  292 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i  292 (380)
                            .....|+.+|.+.+.+.+       .+|++++.|.||.+.++...................+.+..++|+|+++
T Consensus       140 ------~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v  213 (237)
T d1uzma1         140 ------GNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVV  213 (237)
T ss_dssp             -------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHHHHHHHGGGCTTCSCBCHHHHHHHH
T ss_pred             ------cccHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence                  233579999999998765       3799999999999987632110000000111112234568999999999


Q ss_pred             HHHHhCC-CCccCcEEEEecCC
Q 016901          293 ACMAKNR-SLSYCKVVEVIAET  313 (380)
Q Consensus       293 ~~~l~~~-~~~~~~~~ni~~~~  313 (380)
                      ..++.+. .+..|+++.+-+|-
T Consensus       214 ~fL~S~~s~~itG~~i~vdGG~  235 (237)
T d1uzma1         214 SFLASEDASYISGAVIPVDGGM  235 (237)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHhCchhcCCcCCeEEECCCC
Confidence            9998654 33578999887773

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.89  E-value=2.4e-22  Score=182.61  Aligned_cols=217  Identities=14%  Similarity=0.075  Sum_probs=155.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCc-hhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV-QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      +++|++|||||+++||++++++|+++|++|++..|+. +..+++.+.+....            ..++.++++|++|.++
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~------------g~~~~~~~~Dv~~~~~   69 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQH------------GVKVLYDGADLSKGEA   69 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHH------------TSCEEEECCCTTSHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhc------------CCcEEEEECCCCCHHH
Confidence            5789999999999999999999999999999999974 45566555543321            1578899999999988


Q ss_pred             HHHHh-------cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCCC
Q 016901          157 IEPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       157 ~~~a~-------~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~~  219 (380)
                      +++++       +++|++|||||......      .++...+++|+.|+.++++++    ++.+-.++|++||.......
T Consensus        70 v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~  149 (260)
T d1x1ta1          70 VRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVAS  149 (260)
T ss_dssp             HHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC
T ss_pred             HHHHHHHHHHHhCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceecc
Confidence            88776       57999999999653322      123445889999987776654    55566799999998764321


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccc-c----ccce-------eeccCCcccC
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-E----THNI-------TLSQEDTLFG  280 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~-~----~~~~-------~~~~~~~~~~  280 (380)
                            .....|+.+|...+.+.+       .+|++++.|.||++.+|..... .    ....       .........+
T Consensus       150 ------~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~  223 (260)
T d1x1ta1         150 ------ANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSL  223 (260)
T ss_dssp             ------TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTC
T ss_pred             ------CCcchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCCC
Confidence                  233579999999997765       3789999999999987632110 0    0000       0001111234


Q ss_pred             CCCCHHHHHHHHHHHHhCC-CCccCcEEEEecC
Q 016901          281 GQVSNLQVAELLACMAKNR-SLSYCKVVEVIAE  312 (380)
Q Consensus       281 ~~i~~~DvA~~i~~~l~~~-~~~~~~~~ni~~~  312 (380)
                      .+..++|+|++++.++.+. .+..|+++.+-+|
T Consensus       224 R~g~pediA~~v~fL~S~~a~~itG~~i~vDGG  256 (260)
T d1x1ta1         224 QFVTPEQLGGTAVFLASDAAAQITGTTVSVDGG  256 (260)
T ss_dssp             CCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCcCHHHHHHHHHHHhChhhCCCcCCEEEECcc
Confidence            5679999999999999753 3457889888776

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.89  E-value=8.1e-23  Score=183.91  Aligned_cols=214  Identities=16%  Similarity=0.094  Sum_probs=156.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEE-eCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAG-VRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l-~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      +.||||||+++||++++++|+++|++|++. .|+.+..+++.++++..+             .++.++++|++|.+++++
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g-------------~~~~~~~~Dv~~~~~v~~   68 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYG-------------GQAITFGGDVSKEADVEA   68 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHT-------------CEEEEEECCTTSHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcC-------------CcEEEEeCCCCCHHHHHH
Confidence            479999999999999999999999999886 467777787777776553             578899999999988877


Q ss_pred             Hh-------cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCCCCch
Q 016901          160 AL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGFPA  222 (380)
Q Consensus       160 a~-------~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~~~~~  222 (380)
                      ++       +++|++|||||......      .++...+++|+.|+.++.+++    ++.+-.+||++||......    
T Consensus        69 ~~~~~~~~~g~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~----  144 (244)
T d1edoa_          69 MMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIG----  144 (244)
T ss_dssp             HHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC----
T ss_pred             HHHHHHHHcCCCCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCC----
Confidence            65       57999999999654322      234445889999988877765    4556679999999765221    


Q ss_pred             hhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHHH
Q 016901          223 AILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACM  295 (380)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~  295 (380)
                        ......|+.+|.+.+.+.+       .+|++++.|.||++.+|...................+.+..++|+|+++..+
T Consensus       145 --~~~~~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~R~~~p~dvA~~v~fL  222 (244)
T d1edoa_         145 --NIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRTGQPENVAGLVEFL  222 (244)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHHHHHHHTSCTTCSCBCHHHHHHHHHHH
T ss_pred             --CCCCHHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHHHhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence              1233579999999997765       3799999999999977632110000000111122234578999999999998


Q ss_pred             HhCC--CCccCcEEEEecCC
Q 016901          296 AKNR--SLSYCKVVEVIAET  313 (380)
Q Consensus       296 l~~~--~~~~~~~~ni~~~~  313 (380)
                      +..+  .+..|+++.+-+|-
T Consensus       223 a~S~~a~~itG~~i~vdGG~  242 (244)
T d1edoa_         223 ALSPAASYITGQAFTIDGGI  242 (244)
T ss_dssp             HHCSGGGGCCSCEEEESTTT
T ss_pred             HCCchhcCCcCCeEEeCCCe
Confidence            7443  33578888887763

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.89  E-value=1.5e-22  Score=181.83  Aligned_cols=213  Identities=15%  Similarity=0.080  Sum_probs=156.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++|++|||||+++||++++++|+++|++|++.+|+.++++++.+++                 .++..+.+|++|.+++
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~-----------------~~~~~~~~Dv~~~~~v   65 (242)
T d1cyda_           3 FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC-----------------PGIEPVCVDLGDWDAT   65 (242)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS-----------------TTCEEEECCTTCHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc-----------------CCCeEEEEeCCCHHHH
Confidence            47899999999999999999999999999999999988776665422                 5688899999999999


Q ss_pred             HHHhc---CCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHHH-----HcCCCEEEEEccCCCCCCCCchh
Q 016901          158 EPALG---NASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAAT-----IAKVNHFIMVSSLGTNKFGFPAA  223 (380)
Q Consensus       158 ~~a~~---~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~~-----~~~v~r~V~~SS~~~~~~~~~~~  223 (380)
                      +++++   ++|++|||||.......      ++...+++|+.++..+.+++.     +.+-.++|++||......     
T Consensus        66 ~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~-----  140 (242)
T d1cyda_          66 EKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVT-----  140 (242)
T ss_dssp             HHHHTTCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC-----
T ss_pred             HHHHHHcCCCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhcccc-----
Confidence            88874   68999999996533221      233448899999988887653     223468999999765332     


Q ss_pred             hhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccc-cc-cceeeccCCcccCCCCCHHHHHHHHHH
Q 016901          224 ILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-ET-HNITLSQEDTLFGGQVSNLQVAELLAC  294 (380)
Q Consensus       224 ~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~-~~-~~~~~~~~~~~~~~~i~~~DvA~~i~~  294 (380)
                       ......|+.+|.+.+.+.+       .+|++++.|.||++.+|..... .. ............+.+..++|+|+++..
T Consensus       141 -~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeva~~v~f  219 (242)
T d1cyda_         141 -FPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILF  219 (242)
T ss_dssp             -CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHH
T ss_pred             -CCccccccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCCHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence             1234579999999998876       3799999999999987632110 00 000000111223456899999999999


Q ss_pred             HHhCC-CCccCcEEEEecCC
Q 016901          295 MAKNR-SLSYCKVVEVIAET  313 (380)
Q Consensus       295 ~l~~~-~~~~~~~~ni~~~~  313 (380)
                      ++.+. .+..|+++.+-+|-
T Consensus       220 L~S~~s~~itG~~i~vDGG~  239 (242)
T d1cyda_         220 LLSDRSASTSGGGILVDAGY  239 (242)
T ss_dssp             HHSGGGTTCCSSEEEESTTG
T ss_pred             HhCchhcCcCCceEEeCcch
Confidence            98654 33578888887763

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.89  E-value=3.3e-22  Score=181.19  Aligned_cols=215  Identities=18%  Similarity=0.108  Sum_probs=158.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      |.+|||||+++||++++++|+++|++|++.+|++++++++.++++..+             .++..+++|++|.++++++
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g-------------~~~~~~~~Dv~~~~~v~~~   68 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAG-------------GHAVAVKVDVSDRDQVFAA   68 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------------CCEEEEECCTTSHHHHHHH
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-------------CcEEEEEeeCCCHHHHHHH
Confidence            567999999999999999999999999999999999988888776543             5788999999999888776


Q ss_pred             h-------cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHH----HcC-CCEEEEEccCCCCCCCCch
Q 016901          161 L-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAK-VNHFIMVSSLGTNKFGFPA  222 (380)
Q Consensus       161 ~-------~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~----~~~-v~r~V~~SS~~~~~~~~~~  222 (380)
                      +       +++|++|||||......      .++...+++|+.|+.++++++.    +.+ -.++|++||.+.....   
T Consensus        69 ~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~---  145 (255)
T d1gega_          69 VEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGN---  145 (255)
T ss_dssp             HHHHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC---
T ss_pred             HHHHHHHhCCccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccC---
Confidence            5       57999999999653322      1234458899999988887653    333 4579999997653321   


Q ss_pred             hhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccc-----ccccee------eccCCcccCCCCC
Q 016901          223 AILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-----ETHNIT------LSQEDTLFGGQVS  284 (380)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~-----~~~~~~------~~~~~~~~~~~i~  284 (380)
                         .....|+.+|.+.+.+.+       .+|++++.|.||++.+|.....     ......      ........+.+..
T Consensus       146 ---~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~  222 (255)
T d1gega_         146 ---PELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSE  222 (255)
T ss_dssp             ---TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBC
T ss_pred             ---cccccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCCCCCCcC
Confidence               233569999999998765       3799999999999977631100     000000      0011122345689


Q ss_pred             HHHHHHHHHHHHhCCC-CccCcEEEEecCCC
Q 016901          285 NLQVAELLACMAKNRS-LSYCKVVEVIAETT  314 (380)
Q Consensus       285 ~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~~  314 (380)
                      ++|+|++++.++.+.. +..|+++.+-+|-.
T Consensus       223 peevA~~v~fL~S~~a~~itG~~i~vDGG~~  253 (255)
T d1gega_         223 PEDVAACVSYLASPDSDYMTGQSLLIDGGMV  253 (255)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred             HHHHHHHHHHHhCchhCCccCcEEEecCCEE
Confidence            9999999999997543 35788998887753

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.89  E-value=2.9e-22  Score=181.99  Aligned_cols=218  Identities=15%  Similarity=0.118  Sum_probs=159.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCch-hHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ-RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      +++|+++||||+++||++++++|+++|++|++..|+.+ ..+.+.++++..+             .++..+++|++|+++
T Consensus         5 L~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g-------------~~~~~~~~Dvt~~~~   71 (261)
T d1geea_           5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVG-------------GEAIAVKGDVTVESD   71 (261)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-------------CEEEEEECCTTSHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcC-------------CcEEEEEccCCCHHH
Confidence            57899999999999999999999999999999999864 5666666666543             578899999999988


Q ss_pred             HHHHh-------cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHH----HHcCC-CEEEEEccCCCCCC
Q 016901          157 IEPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKV-NHFIMVSSLGTNKF  218 (380)
Q Consensus       157 ~~~a~-------~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~----~~~~v-~r~V~~SS~~~~~~  218 (380)
                      +++++       +++|++|||||......      .++...+++|+.|+.++.+++    .+.+. ++||++||.+....
T Consensus        72 v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~  151 (261)
T d1geea_          72 VINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIP  151 (261)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC
T ss_pred             HHHHHHHHHHHhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhccc
Confidence            87766       57999999999653322      133445889999988877665    44553 46899999765322


Q ss_pred             CCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccc--cccceeeccCCcccCCCCCHHHHH
Q 016901          219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK--ETHNITLSQEDTLFGGQVSNLQVA  289 (380)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~--~~~~~~~~~~~~~~~~~i~~~DvA  289 (380)
                      .      .....|+.+|.+.+.+.+       .+|++++.|.||++.+|.....  ..............+.+..++|+|
T Consensus       152 ~------~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA  225 (261)
T d1geea_         152 W------PLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIA  225 (261)
T ss_dssp             C------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHH
T ss_pred             C------ccccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCCCCCCCCHHHHH
Confidence            1      233579999999998765       3799999999999987743211  000000011122234567999999


Q ss_pred             HHHHHHHhCC-CCccCcEEEEecCCC
Q 016901          290 ELLACMAKNR-SLSYCKVVEVIAETT  314 (380)
Q Consensus       290 ~~i~~~l~~~-~~~~~~~~ni~~~~~  314 (380)
                      ++++.++.+. ....|+++.+-+|..
T Consensus       226 ~~v~fL~S~~s~~itG~~i~vDGG~s  251 (261)
T d1geea_         226 AVAAWLASSEASYVTGITLFADGGMT  251 (261)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHhCchhcCCcCCeEEECCCee
Confidence            9999999654 335789998888753

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.89  E-value=2.9e-23  Score=191.59  Aligned_cols=221  Identities=14%  Similarity=0.070  Sum_probs=147.2

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCc--hhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH-H
Q 016901           83 AFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV--QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI-E  158 (380)
Q Consensus        83 vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~-~  158 (380)
                      |||||||||||++|++.|+++|+ +|+++++-.  .+...+.+                   ..    ..|..+.+.+ .
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~~-------------------~~----~~~~~~~~~~~~   58 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVD-------------------LN----IADYMDKEDFLI   58 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHT-------------------SC----CSEEEEHHHHHH
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhcccc-------------------cc----hhhhccchHHHH
Confidence            89999999999999999999995 788875322  22221110                   01    1122222222 2


Q ss_pred             -----HHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCC-CCC----Cchhhhchh
Q 016901          159 -----PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTN-KFG----FPAAILNLF  228 (380)
Q Consensus       159 -----~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~-~~~----~~~~~~~~~  228 (380)
                           ..+..+++|+|+|+.......+.......|+.++.+++++++..+++ +|+.||..+. ...    .......+.
T Consensus        59 ~~~~~~~~~~~~~i~~~aa~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~-~v~~ss~~~~~~~~~~~~~~~~~~~~~  137 (307)
T d1eq2a_          59 QIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIP-FLYASSAATYGGRTSDFIESREYEKPL  137 (307)
T ss_dssp             HHHTTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTCC-EEEEEEGGGGTTCCSCBCSSGGGCCCS
T ss_pred             HHhhhhcccchhhhhhhccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccc
Confidence                 22356899999998655444444445677899999999999999986 4455554332 211    112334566


Q ss_pred             hHHHHHHHHHHHHHH----HCCCCEEEEecCcccCCCcccccccce----------------eeccCCcccCCCCCHHHH
Q 016901          229 WGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKETHNI----------------TLSQEDTLFGGQVSNLQV  288 (380)
Q Consensus       229 ~~Y~~sK~~~E~~l~----~~g~~~~ivRpg~v~gp~~~~~~~~~~----------------~~~~~~~~~~~~i~~~Dv  288 (380)
                      +.|+.+|..+|.+++    +.+++++++||+++|||++........                ...........++|++|+
T Consensus       138 ~~Y~~~K~~~e~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~  217 (307)
T d1eq2a_         138 NVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDV  217 (307)
T ss_dssp             SHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHH
T ss_pred             cccccccchhhhhccccccccccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccH
Confidence            789999999998887    478999999999999997643211110                111222233468999999


Q ss_pred             HHHHHHHHhCCCCccCcEEEEecCCCCCcchHHHHHHhcCCC
Q 016901          289 AELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQ  330 (380)
Q Consensus       289 A~~i~~~l~~~~~~~~~~~ni~~~~~~s~~~~~e~~~~~~~~  330 (380)
                      +.++..+++++.   .+.||+++++..++.++++++.++.+.
T Consensus       218 ~~~~~~~~~~~~---~~~~~~~~~~~~si~~i~~~i~~~~~~  256 (307)
T d1eq2a_         218 ADVNLWFLENGV---SGIFNLGTGRAESFQAVADATLAYHKK  256 (307)
T ss_dssp             HHHHHHHHHHCC---CEEEEESCSCCBCHHHHHHHC------
T ss_pred             HHHHHHHhhhcc---ccccccccccchhHHHHHHHHHHhcCC
Confidence            999999998765   679999999999999999999877653

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.89  E-value=2.3e-22  Score=183.11  Aligned_cols=221  Identities=15%  Similarity=0.180  Sum_probs=155.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ++++|++|||||+++||++++++|+++|++|++.+|+.+++++..+++...+..          ..++.++.+|++|.++
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~----------~~~~~~~~~Dvt~~~~   71 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVS----------EQNVNSVVADVTTDAG   71 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC----------GGGEEEEECCTTSHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCC----------cCceEEEEccCCCHHH
Confidence            468899999999999999999999999999999999999998888877765322          1468999999999988


Q ss_pred             HHHHh-------cCCCEEEEccccCccc----------cCCCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCC
Q 016901          157 IEPAL-------GNASVVICCIGASEKE----------VFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGT  215 (380)
Q Consensus       157 ~~~a~-------~~~d~Vi~~Ag~~~~~----------~~~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~  215 (380)
                      +++++       +++|++|||||.....          ..++...+++|+.++..+.+++.    +.+ .++|+++|...
T Consensus        72 v~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~S~~~  150 (264)
T d1spxa_          72 QDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIAS  150 (264)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTS
T ss_pred             HHHHHHHHHHHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc-Ccceeeeeecc
Confidence            87766       5799999999864211          11234458899999888877664    333 46666666543


Q ss_pred             CCCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccccc---ccceee------ccCCccc
Q 016901          216 NKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE---THNITL------SQEDTLF  279 (380)
Q Consensus       216 ~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~---~~~~~~------~~~~~~~  279 (380)
                      ...+.     .....|+.+|.+.+.+.+       .+|++++.|.||.+..+......   ......      .......
T Consensus       151 ~~~~~-----~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl  225 (264)
T d1spxa_         151 GLHAT-----PDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPA  225 (264)
T ss_dssp             SSSCC-----TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTT
T ss_pred             ccccC-----CCchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCC
Confidence            22221     223469999999997765       37999999999999876421100   000000      0011123


Q ss_pred             CCCCCHHHHHHHHHHHHhCC--CCccCcEEEEecCC
Q 016901          280 GGQVSNLQVAELLACMAKNR--SLSYCKVVEVIAET  313 (380)
Q Consensus       280 ~~~i~~~DvA~~i~~~l~~~--~~~~~~~~ni~~~~  313 (380)
                      +.+..++|+|++++.++.++  .+..|+++.+-+|.
T Consensus       226 ~R~g~pedvA~~v~fL~S~~~s~~itG~~i~vDGG~  261 (264)
T d1spxa_         226 GVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGS  261 (264)
T ss_dssp             SSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTG
T ss_pred             CCCcCHHHHHHHHHHHhCCcccCCccCceEEeCCCh
Confidence            45678999999999999643  34678999887764

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.89  E-value=5.2e-23  Score=187.02  Aligned_cols=217  Identities=12%  Similarity=0.074  Sum_probs=159.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ++++|++|||||+++||+++++.|+++|++|++++|+++++++..++++..+             .++..+.+|++|.++
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g-------------~~~~~~~~Dv~~~~~   68 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKG-------------VEARSYVCDVTSEEA   68 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT-------------SCEEEEECCTTCHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-------------CcEEEEEccCCCHHH
Confidence            3588999999999999999999999999999999999998888887776543             578999999999988


Q ss_pred             HHHHh-------cCCCEEEEccccCcc-c-c-----CCCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCC
Q 016901          157 IEPAL-------GNASVVICCIGASEK-E-V-----FDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKF  218 (380)
Q Consensus       157 ~~~a~-------~~~d~Vi~~Ag~~~~-~-~-----~~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~  218 (380)
                      +++++       +.+|++|||||.... . .     .++...+++|+.++..+++++    .+.+-.++|++||......
T Consensus        69 v~~~~~~~~~~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~  148 (260)
T d1zema1          69 VIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKG  148 (260)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSC
T ss_pred             HHHHHHHHHHHhCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccC
Confidence            77765       579999999996422 1 1     123344789999988877765    4455679999999755322


Q ss_pred             CCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccccc--------cccee--------eccC
Q 016901          219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE--------THNIT--------LSQE  275 (380)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~--------~~~~~--------~~~~  275 (380)
                            ......|+.+|.+.+.+.+       .+|++++.|.||+|.++......        .....        ....
T Consensus       149 ------~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (260)
T d1zema1         149 ------PPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIG  222 (260)
T ss_dssp             ------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHH
T ss_pred             ------CcchHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHh
Confidence                  1233579999999998776       37899999999999876321000        00000        0001


Q ss_pred             CcccCCCCCHHHHHHHHHHHHhCCC-CccCcEEEEecC
Q 016901          276 DTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE  312 (380)
Q Consensus       276 ~~~~~~~i~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~  312 (380)
                      ....+.+..++|+|.++..++.+.. +..|+++.+-+|
T Consensus       223 ~~Pl~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG  260 (260)
T d1zema1         223 SVPMRRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG  260 (260)
T ss_dssp             TSTTSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             cCCCCCCcCHHHHHHHHHHHhCchhcCccCCeEEeCCC
Confidence            1123446789999999999997533 346888877654

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.89  E-value=2.5e-22  Score=183.67  Aligned_cols=222  Identities=16%  Similarity=0.171  Sum_probs=159.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ++++|++|||||+++||+++++.|+++|++|++.+|+.+++++..+++.+.+..          ..++..+++|++|+++
T Consensus         2 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~----------~~~~~~~~~Dvs~~~~   71 (272)
T d1xkqa_           2 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVS----------EKQVNSVVADVTTEDG   71 (272)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCC----------GGGEEEEECCTTSHHH
T ss_pred             CCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCC----------CCceEEEEccCCCHHH
Confidence            358899999999999999999999999999999999999999888887764322          1578999999999988


Q ss_pred             HHHHh-------cCCCEEEEccccCccccC----------CCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccC-C
Q 016901          157 IEPAL-------GNASVVICCIGASEKEVF----------DITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSL-G  214 (380)
Q Consensus       157 ~~~a~-------~~~d~Vi~~Ag~~~~~~~----------~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~-~  214 (380)
                      +++++       +++|++|||||.......          ++...+++|+.++..+++++.    +.+ ..+|+++|. +
T Consensus        72 v~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~Ss~a  150 (272)
T d1xkqa_          72 QDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVA  150 (272)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGG
T ss_pred             HHHHHHHHHHHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccC-Cccccccchhc
Confidence            87765       579999999996532211          133347899999888887764    333 456656553 3


Q ss_pred             CCCCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccc-----c----ceeeccCCcc
Q 016901          215 TNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-----H----NITLSQEDTL  278 (380)
Q Consensus       215 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~-----~----~~~~~~~~~~  278 (380)
                      ... +.     .....|+.+|.+.+.+.+       .+|++++.|.||+|.+|.......     .    ..........
T Consensus       151 ~~~-~~-----~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~P  224 (272)
T d1xkqa_         151 GPQ-AQ-----PDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIP  224 (272)
T ss_dssp             SSS-CC-----CSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCT
T ss_pred             ccc-CC-----CCcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCC
Confidence            321 11     223569999999987765       389999999999998763211000     0    0000112223


Q ss_pred             cCCCCCHHHHHHHHHHHHhCC--CCccCcEEEEecCCCC
Q 016901          279 FGGQVSNLQVAELLACMAKNR--SLSYCKVVEVIAETTA  315 (380)
Q Consensus       279 ~~~~i~~~DvA~~i~~~l~~~--~~~~~~~~ni~~~~~~  315 (380)
                      .+.+..++|+|++++.++.++  .+..|+++.+-+|...
T Consensus       225 lgR~g~pediA~~v~fL~S~~as~~iTG~~i~vDGG~~l  263 (272)
T d1xkqa_         225 IGAAGKPEHIANIILFLADRNLSFYILGQSIVADGGTSL  263 (272)
T ss_dssp             TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             CCCCcCHHHHHHHHHHHhCcchhCCccCeEEEeCcCHHH
Confidence            345679999999999999643  3457999988887543

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1e-22  Score=184.44  Aligned_cols=220  Identities=13%  Similarity=0.125  Sum_probs=160.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ++|++|||||+++||+++++.|+++|++|++++|+.++.++...++....           ...++.++.+|++|.++++
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~-----------~~~~~~~~~~Dv~~~~~v~   70 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQF-----------EPQKTLFIQCDVADQQQLR   70 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTS-----------CGGGEEEEECCTTSHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhc-----------CCCcEEEEEeecCCHHHHH
Confidence            57999999999999999999999999999999999998887776654321           1257889999999998887


Q ss_pred             HHh-------cCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHH----HcC---CCEEEEEccCCCCCCCCchhh
Q 016901          159 PAL-------GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAAT----IAK---VNHFIMVSSLGTNKFGFPAAI  224 (380)
Q Consensus       159 ~a~-------~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~----~~~---v~r~V~~SS~~~~~~~~~~~~  224 (380)
                      +++       +++|++|||||....  .++++.+++|+.++.++.+++.    +.+   -.+||++||.......     
T Consensus        71 ~~~~~~~~~~G~iDilVnnAg~~~~--~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~-----  143 (254)
T d2gdza1          71 DTFRKVVDHFGRLDILVNNAGVNNE--KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPV-----  143 (254)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCS--SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC-----
T ss_pred             HHHHHHHHHcCCcCeeccccccccc--ccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCC-----
Confidence            766       579999999997543  3456668999988877776653    322   2579999998663321     


Q ss_pred             hchhhHHHHHHHHHHHHHH---------HCCCCEEEEecCcccCCCccc-ccccc----eee---ccCCcccCCCCCHHH
Q 016901          225 LNLFWGVLLWKRKAEEALI---------ASGLPYTIVRPGGMERPTDAY-KETHN----ITL---SQEDTLFGGQVSNLQ  287 (380)
Q Consensus       225 ~~~~~~Y~~sK~~~E~~l~---------~~g~~~~ivRpg~v~gp~~~~-~~~~~----~~~---~~~~~~~~~~i~~~D  287 (380)
                       .....|+.+|.+.+.+.+         .+|++++.|.||.+.+|.... .....    ...   .......+.+..++|
T Consensus       144 -~~~~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~ped  222 (254)
T d2gdza1         144 -AQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPL  222 (254)
T ss_dssp             -TTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHH
T ss_pred             -CCccchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCCCCCCcCHHH
Confidence             233569999998876543         378999999999997653110 00000    000   000111235678999


Q ss_pred             HHHHHHHHHhCCCCccCcEEEEecCCCCCcc
Q 016901          288 VAELLACMAKNRSLSYCKVVEVIAETTAPLT  318 (380)
Q Consensus       288 vA~~i~~~l~~~~~~~~~~~ni~~~~~~s~~  318 (380)
                      +|++++.++.++. ..|+++.|-+|....+.
T Consensus       223 vA~~v~fL~s~~~-itG~~i~VdGG~~~~~~  252 (254)
T d2gdza1         223 IANGLITLIEDDA-LNGAIMKITTSKGIHFQ  252 (254)
T ss_dssp             HHHHHHHHHHCTT-CSSCEEEEETTTEEEEC
T ss_pred             HHHHHHHHHcCCC-CCCCEEEECCCCeeecc
Confidence            9999999998765 68999999988755443

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.89  E-value=5.3e-22  Score=181.67  Aligned_cols=221  Identities=14%  Similarity=0.141  Sum_probs=161.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++|+++||||+++||+++++.|+++|++|++.+|+.+++++..+++.+.+...          .++..+.+|++|++++
T Consensus         2 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~----------~~~~~~~~Dv~~~~~v   71 (274)
T d1xhla_           2 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPA----------EKINAVVADVTEASGQ   71 (274)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCG----------GGEEEEECCTTSHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCC----------cceEEEEeeCCCHHHH
Confidence            478999999999999999999999999999999999999988888877654221          4789999999999888


Q ss_pred             HHHh-------cCCCEEEEccccCcccc--------CCCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCC
Q 016901          158 EPAL-------GNASVVICCIGASEKEV--------FDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKF  218 (380)
Q Consensus       158 ~~a~-------~~~d~Vi~~Ag~~~~~~--------~~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~  218 (380)
                      ++++       +.+|++|||||......        .++...+++|+.++..+.+++    ++.+-.+++++||.+....
T Consensus        72 ~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~  151 (274)
T d1xhla_          72 DDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQA  151 (274)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSC
T ss_pred             HHHHHHHHHHcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhcccc
Confidence            7765       57999999998542211        123444789999988877766    3455567888887654221


Q ss_pred             CCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccccc-----cc---c-eeeccCCcccCCC
Q 016901          219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE-----TH---N-ITLSQEDTLFGGQ  282 (380)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~-----~~---~-~~~~~~~~~~~~~  282 (380)
                       .     .....|+.+|.+.+.+.+       .+|++++.|.||++.+|......     ..   . ..........+.+
T Consensus       152 -~-----~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPlgR~  225 (274)
T d1xhla_         152 -H-----SGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHC  225 (274)
T ss_dssp             -C-----TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSC
T ss_pred             -C-----CCCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCCCCC
Confidence             1     223469999999998775       37999999999999876321100     00   0 0001112233456


Q ss_pred             CCHHHHHHHHHHHHhC--CCCccCcEEEEecCCC
Q 016901          283 VSNLQVAELLACMAKN--RSLSYCKVVEVIAETT  314 (380)
Q Consensus       283 i~~~DvA~~i~~~l~~--~~~~~~~~~ni~~~~~  314 (380)
                      ..++|+|++++.++..  ..+..|+++.+-+|..
T Consensus       226 g~pediA~~v~fL~S~d~s~~itG~~i~vDGG~~  259 (274)
T d1xhla_         226 GKPEEIANIIVFLADRNLSSYIIGQSIVADGGST  259 (274)
T ss_dssp             BCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred             cCHHHHHHHHHHHcCCccccCccCcEEEeCcCHH
Confidence            7999999999999953  3446799999888854

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=7.2e-22  Score=179.06  Aligned_cols=211  Identities=18%  Similarity=0.209  Sum_probs=151.2

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCCh
Q 016901           75 ADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (380)
Q Consensus        75 ~~~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~  154 (380)
                      |.++++|++|||||+++||+++++.|+++|++|++..|++++++++.++++..+..           .++.++++|++|+
T Consensus         5 M~~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~-----------~~~~~~~~Dls~~   73 (257)
T d1xg5a_           5 MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYP-----------GTLIPYRCDLSNE   73 (257)
T ss_dssp             CGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCS-----------SEEEEEECCTTCH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCC-----------ceEEEEEccCCCH
Confidence            44568899999999999999999999999999999999999999988887764321           4788999999999


Q ss_pred             hcHHHHh-------cCCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHH----HHcC--CCEEEEEccCCC
Q 016901          155 VQIEPAL-------GNASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAA----TIAK--VNHFIMVSSLGT  215 (380)
Q Consensus       155 ~~~~~a~-------~~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~----~~~~--v~r~V~~SS~~~  215 (380)
                      +++++++       +++|++|||||.......      ++...+++|+.+..++.+++    ++.+  -.++|++||...
T Consensus        74 ~~v~~~v~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~  153 (257)
T d1xg5a_          74 EDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSG  153 (257)
T ss_dssp             HHHHHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGG
T ss_pred             HHHHHHHHHHHHhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHh
Confidence            8887765       579999999986533221      23334788999988776665    3443  469999999765


Q ss_pred             CCCCCchhhhchhhHHHHHHHHHHHHHH---------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHH
Q 016901          216 NKFGFPAAILNLFWGVLLWKRKAEEALI---------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNL  286 (380)
Q Consensus       216 ~~~~~~~~~~~~~~~Y~~sK~~~E~~l~---------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~  286 (380)
                      .... |   ......|+.+|...+.+.+         .+|++++.|.||.+-.+...................+.++.++
T Consensus       154 ~~~~-p---~~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~r~~~pe  229 (257)
T d1xg5a_         154 HRVL-P---LSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCLKPE  229 (257)
T ss_dssp             TSCC-S---CGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHHHC---CBCHH
T ss_pred             cCCC-C---CcccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChhhHHHHHhcCCCCCCcCHH
Confidence            3211 1   1233469999999887653         3689999999999876532111100000011111224578999


Q ss_pred             HHHHHHHHHHhCCC
Q 016901          287 QVAELLACMAKNRS  300 (380)
Q Consensus       287 DvA~~i~~~l~~~~  300 (380)
                      |+|++++.++.++.
T Consensus       230 dvA~~v~fL~s~~a  243 (257)
T d1xg5a_         230 DVAEAVIYVLSTPA  243 (257)
T ss_dssp             HHHHHHHHHHHSCT
T ss_pred             HHHHHHHHHhCChh
Confidence            99999999998765

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=6.2e-22  Score=177.91  Aligned_cols=195  Identities=17%  Similarity=0.128  Sum_probs=150.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      +..+|+|+||||+++||++++++|+++|++|++.+|+.++++++.+++...+             .++..+.+|++|.++
T Consensus         4 ~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~-------------~~~~~~~~Dvs~~~~   70 (244)
T d1yb1a_           4 SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLG-------------AKVHTFVVDCSNRED   70 (244)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------------CCEEEEECCTTCHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-------------CcEEEEEeeCCCHHH
Confidence            4588999999999999999999999999999999999999988888776543             679999999999988


Q ss_pred             HHHHh-------cCCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCCC
Q 016901          157 IEPAL-------GNASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       157 ~~~a~-------~~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~~  219 (380)
                      +++++       +.+|++|||||.......      .++..+++|+.|+.++++++    ++.+.++||++||...... 
T Consensus        71 v~~~~~~i~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~-  149 (244)
T d1yb1a_          71 IYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVS-  149 (244)
T ss_dssp             HHHHHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCC-
T ss_pred             HHHHHHHHHHHcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCC-
Confidence            87765       569999999997643322      23445889999988777654    5667779999999876432 


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHH-------H---CCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHH
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALI-------A---SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVA  289 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~---~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA  289 (380)
                           ......|+.+|++.+.+.+       .   .|++++.|.||+|..+....          ........+.++|+|
T Consensus       150 -----~~~~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~----------~~~~~~~~~~pe~va  214 (244)
T d1yb1a_         150 -----VPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN----------PSTSLGPTLEPEEVV  214 (244)
T ss_dssp             -----HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC----------THHHHCCCCCHHHHH
T ss_pred             -----CCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhC----------cCccccCCCCHHHHH
Confidence                 2334579999999887654       1   47999999999996652110          001122457899999


Q ss_pred             HHHHHHHhCCC
Q 016901          290 ELLACMAKNRS  300 (380)
Q Consensus       290 ~~i~~~l~~~~  300 (380)
                      +.++..+..+.
T Consensus       215 ~~i~~~~~~~~  225 (244)
T d1yb1a_         215 NRLMHGILTEQ  225 (244)
T ss_dssp             HHHHHHHHTTC
T ss_pred             HHHHHHHhcCC
Confidence            99998887755

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.89  E-value=9.3e-22  Score=178.37  Aligned_cols=218  Identities=18%  Similarity=0.157  Sum_probs=158.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ++++|+||||||+++||++++++|+++|++|++.+|+++++++..++++..+             ..+.++.+|++|.++
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~-------------~~~~~~~~D~s~~~~   69 (258)
T d1ae1a_           3 SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKG-------------LNVEGSVCDLLSRTE   69 (258)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------------CCEEEEECCTTCHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-------------CCceEEEeecCCHHH
Confidence            3578999999999999999999999999999999999998888877776543             568889999999988


Q ss_pred             HHHHh--------cCCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCC
Q 016901          157 IEPAL--------GNASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKF  218 (380)
Q Consensus       157 ~~~a~--------~~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~  218 (380)
                      +++++        +.+|+||||||.......      ++...+++|+.++..+.+++    .+.+..++|++||......
T Consensus        70 ~~~~~~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~  149 (258)
T d1ae1a_          70 RDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSA  149 (258)
T ss_dssp             HHHHHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSC
T ss_pred             HHHHHHHHHHHhCCCcEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccc
Confidence            77665        248999999997643322      23344789999988877765    4556679999999876332


Q ss_pred             CCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccc-ccc-----ceeeccCCcccCCCCCH
Q 016901          219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-ETH-----NITLSQEDTLFGGQVSN  285 (380)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~-~~~-----~~~~~~~~~~~~~~i~~  285 (380)
                      .      .....|+.+|.+.+.+.+       .+|++++.|.||++.+|..... ...     ...........+.+..+
T Consensus       150 ~------~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plgR~~~p  223 (258)
T d1ae1a_         150 L------PSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKP  223 (258)
T ss_dssp             C------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCH
T ss_pred             c------ccchhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCCCCCcCH
Confidence            1      234579999999998876       3789999999999987742110 000     00000111223457899


Q ss_pred             HHHHHHHHHHHhCC-CCccCcEEEEecCC
Q 016901          286 LQVAELLACMAKNR-SLSYCKVVEVIAET  313 (380)
Q Consensus       286 ~DvA~~i~~~l~~~-~~~~~~~~ni~~~~  313 (380)
                      +|+|.++..++.+. ....|+.+.+-+|-
T Consensus       224 ediA~~v~fL~S~~s~~itG~~i~vDGG~  252 (258)
T d1ae1a_         224 QEVSALIAFLCFPAASYITGQIIWADGGF  252 (258)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHHHhChhhCCCcCcEEEeCCCe
Confidence            99999999999653 33578888777663

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.88  E-value=9.6e-22  Score=176.37  Aligned_cols=192  Identities=13%  Similarity=0.132  Sum_probs=147.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCe-------EEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCC
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFR-------VRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK  153 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~-------V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d  153 (380)
                      +.||||||+++||+++++.|+++|++       |++..|+.++++++.++++..+             .++.++.+|++|
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g-------------~~~~~~~~Dvt~   68 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEG-------------ALTDTITADISD   68 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTT-------------CEEEEEECCTTS
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcC-------------CcEEEEEecCCC
Confidence            46899999999999999999999987       8899999999888887776543             578899999999


Q ss_pred             hhcHHHHh-------cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCC
Q 016901          154 RVQIEPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTN  216 (380)
Q Consensus       154 ~~~~~~a~-------~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~  216 (380)
                      .+++++++       +++|++|||||......      .++...+++|+.|+..+++++    ++.+-+++|++||....
T Consensus        69 ~~~v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~  148 (240)
T d2bd0a1          69 MADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAAT  148 (240)
T ss_dssp             HHHHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred             HHHHHHHHHHHHHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhc
Confidence            98877765       57999999999653322      233445889999988877665    45566799999998664


Q ss_pred             CCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHH
Q 016901          217 KFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVA  289 (380)
Q Consensus       217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA  289 (380)
                      ...      .....|+.+|.+.+.+.+       .+|++++.|.||++.+|....       .  ..........++|+|
T Consensus       149 ~~~------~~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~-------~--~~~~~~~~~~PedvA  213 (240)
T d2bd0a1         149 KAF------RHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGK-------V--DDEMQALMMMPEDIA  213 (240)
T ss_dssp             SCC------TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCC-------C--CSTTGGGSBCHHHHH
T ss_pred             CCC------CCChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhh-------c--CHhhHhcCCCHHHHH
Confidence            321      233579999999987765       379999999999998773211       0  111112357899999


Q ss_pred             HHHHHHHhCCC
Q 016901          290 ELLACMAKNRS  300 (380)
Q Consensus       290 ~~i~~~l~~~~  300 (380)
                      ++++.++.++.
T Consensus       214 ~~v~~l~s~~~  224 (240)
T d2bd0a1         214 APVVQAYLQPS  224 (240)
T ss_dssp             HHHHHHHTSCT
T ss_pred             HHHHHHHcCCc
Confidence            99999998765

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=2.4e-21  Score=179.16  Aligned_cols=222  Identities=14%  Similarity=0.109  Sum_probs=160.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ++++|++|||||+++||++++++|+++|++|++..|+.++.++..+++....        ......++..+.+|++|+++
T Consensus         9 ~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~--------~~~~~~~~~~~~~Dvs~~~~   80 (297)
T d1yxma1           9 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANL--------PPTKQARVIPIQCNIRNEEE   80 (297)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTS--------CTTCCCCEEEEECCTTCHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhh--------ccccCceEEEEeccCCCHHH
Confidence            4589999999999999999999999999999999999998888777765421        11112578999999999988


Q ss_pred             HHHHh-------cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCCC
Q 016901          157 IEPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       157 ~~~a~-------~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~~  219 (380)
                      +++++       +++|++|||||......      .++...+++|+.|+..+++++.    +.+-.++|++|+.+.... 
T Consensus        81 v~~~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~~~~-  159 (297)
T d1yxma1          81 VNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGF-  159 (297)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTCC-
T ss_pred             HHHHHHHHHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccccccccc-
Confidence            87765       57999999998653221      1234458899999988887764    344567888877544221 


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccc--ccc--cceeeccCCcccCCCCCHHHH
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAY--KET--HNITLSQEDTLFGGQVSNLQV  288 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~--~~~--~~~~~~~~~~~~~~~i~~~Dv  288 (380)
                            .....|+.+|.+.+.+.+       .+|++++.|.||.|..+....  ...  ............+.+..++|+
T Consensus       160 ------~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~plgR~g~pedv  233 (297)
T d1yxma1         160 ------PLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEV  233 (297)
T ss_dssp             ------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHH
T ss_pred             ------cccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCCCCCCcCHHHH
Confidence                  223569999999998876       378999999999998774211  000  000001111223456789999


Q ss_pred             HHHHHHHHhCC-CCccCcEEEEecCC
Q 016901          289 AELLACMAKNR-SLSYCKVVEVIAET  313 (380)
Q Consensus       289 A~~i~~~l~~~-~~~~~~~~ni~~~~  313 (380)
                      |.+++.++.+. .+..|+++.+-+|.
T Consensus       234 A~~v~fL~Sd~s~~iTG~~i~VDGG~  259 (297)
T d1yxma1         234 SSVVCFLLSPAASFITGQSVDVDGGR  259 (297)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHhCchhcCcCCcEEEeCcCh
Confidence            99999999753 34578999888875

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.88  E-value=1.4e-21  Score=176.66  Aligned_cols=214  Identities=14%  Similarity=0.133  Sum_probs=155.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ++++|++|||||+++||+++++.|+++|++|++.+|++++.+++.+++.                .+..++++|++|.++
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~----------------~~~~~~~~Dv~~~~~   66 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELG----------------ERSMFVRHDVSSEAD   66 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC----------------TTEEEECCCTTCHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC----------------CCeEEEEeecCCHHH
Confidence            3588999999999999999999999999999999999988777665442                567889999999887


Q ss_pred             HHHHh-------cCCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCCC
Q 016901          157 IEPAL-------GNASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG  219 (380)
Q Consensus       157 ~~~a~-------~~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~~  219 (380)
                      +++++       +.+|++|||||.......      ++...+++|+.++..+++++.    +.+ .+||++||...... 
T Consensus        67 ~~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-G~Iv~isS~~~~~~-  144 (253)
T d1hxha_          67 WTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLP-  144 (253)
T ss_dssp             HHHHHHHHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSC-
T ss_pred             HHHHHHHHHHHhCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC-CceecccchhhhcC-
Confidence            77665       579999999996533221      234458899999888777664    333 69999999766332 


Q ss_pred             CchhhhchhhHHHHHHHHHHHHHH-------H--CCCCEEEEecCcccCCCccc--ccc---cceeeccCCcccCCCCCH
Q 016901          220 FPAAILNLFWGVLLWKRKAEEALI-------A--SGLPYTIVRPGGMERPTDAY--KET---HNITLSQEDTLFGGQVSN  285 (380)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~--~g~~~~ivRpg~v~gp~~~~--~~~---~~~~~~~~~~~~~~~i~~  285 (380)
                           ......|+.+|.+.+.+.+       .  ++++++.|.||++.+|....  ...   ............+.+..+
T Consensus       145 -----~~~~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~p  219 (253)
T d1hxha_         145 -----IEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMP  219 (253)
T ss_dssp             -----CTTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECH
T ss_pred             -----ccccccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhHHHHHhCccccccCCCCCH
Confidence                 1233579999999887764       1  46999999999998763210  000   000001111223446789


Q ss_pred             HHHHHHHHHHHhCC-CCccCcEEEEecCC
Q 016901          286 LQVAELLACMAKNR-SLSYCKVVEVIAET  313 (380)
Q Consensus       286 ~DvA~~i~~~l~~~-~~~~~~~~ni~~~~  313 (380)
                      +|+|++++.++.+. .+..|+++++-+|-
T Consensus       220 edvA~~v~fL~S~~s~~itG~~i~VDGG~  248 (253)
T d1hxha_         220 ERIAQLVLFLASDESSVMSGSELHADNSI  248 (253)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESSSC
T ss_pred             HHHHHHHHHHhChhhCCCcCcEEEECccH
Confidence            99999999999753 33578889887763

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.87  E-value=5.8e-23  Score=188.82  Aligned_cols=217  Identities=13%  Similarity=0.059  Sum_probs=155.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      |+|||||||||||++|++.|.++|+.|.+ .++..                           .   +.+|++|.+.++++
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~g~~v~~-~~~~~---------------------------~---~~~Dl~~~~~~~~~   49 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPVGNLIAL-DVHSK---------------------------E---FCGDFSNPKGVAET   49 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTTSEEEEE-CTTCS---------------------------S---SCCCTTCHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEE-ECCCc---------------------------c---ccCcCCCHHHHHHH
Confidence            67999999999999999999999875544 44321                           1   24799999999999


Q ss_pred             hc--CCCEEEEccccCcc--ccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCC-----CchhhhchhhHH
Q 016901          161 LG--NASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNLFWGV  231 (380)
Q Consensus       161 ~~--~~d~Vi~~Ag~~~~--~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~-----~~~~~~~~~~~Y  231 (380)
                      ++  ++|+|||+||....  ...++...+++|+.++.+++++|++.++ +++++||..++...     .+..+..+.+.|
T Consensus        50 i~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y  128 (298)
T d1n2sa_          50 VRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIPWQETDATSPLNVY  128 (298)
T ss_dssp             HHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTCCBCTTSCCCCSSHH
T ss_pred             HHHcCCCEEEEecccccccccccCccccccccccccccchhhhhcccc-ccccccccccccCCCCCCCccccccCCCchH
Confidence            86  47999999986532  2223344578899999999999998885 68888887654322     122344566789


Q ss_pred             HHHHHHHHHHHHHCCCCEEEEecCcccC-CCcccccc------cceeeccCCcccCCCCCHHHHHHHHHHHHhC---CCC
Q 016901          232 LLWKRKAEEALIASGLPYTIVRPGGMER-PTDAYKET------HNITLSQEDTLFGGQVSNLQVAELLACMAKN---RSL  301 (380)
Q Consensus       232 ~~sK~~~E~~l~~~g~~~~ivRpg~v~g-p~~~~~~~------~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~---~~~  301 (380)
                      +.+|..+|++++.......++|++..++ ++......      ....+.........+++..|+++++..++..   .. 
T Consensus       129 ~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~i~~~~~~~-  207 (298)
T d1n2sa_         129 GKTKLAGEKALQDNCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRVALNKP-  207 (298)
T ss_dssp             HHHHHHHHHHHHHHCSSEEEEEECSEECSSSCCHHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHHHHHHCG-
T ss_pred             hhhhhhhhhhHHhhhcccccccccceeeccCCccchhhhhhhcccceeecccceeecccccchHHHHHHHHHhhhhccc-
Confidence            9999999999998777788888877654 33322110      0011111122344679999999998877652   22 


Q ss_pred             ccCcEEEEecCCCCCcchHHHHHHhcCCC
Q 016901          302 SYCKVVEVIAETTAPLTPMEELLAKIPSQ  330 (380)
Q Consensus       302 ~~~~~~ni~~~~~~s~~~~~e~~~~~~~~  330 (380)
                      ...++||+++++..+..++++++.+..+.
T Consensus       208 ~~~~~~n~~~~~~~~~~~~~~~i~~~~~~  236 (298)
T d1n2sa_         208 EVAGLYHLVAGGTTTWHDYAALVFDEARK  236 (298)
T ss_dssp             GGCEEEECCCBSCEEHHHHHHHHHHHHHH
T ss_pred             cccccccccCCCceecHHHHHHHHhhhhc
Confidence            34789999999999999999988776544

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.87  E-value=2.3e-21  Score=173.98  Aligned_cols=213  Identities=13%  Similarity=0.068  Sum_probs=153.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++|++|||||+++||+++++.|+++|++|++..|+.+++.+..+   ++             ..++.++++|++|++++
T Consensus         3 l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~---~~-------------~~~~~~~~~Dls~~~~i   66 (241)
T d2a4ka1           3 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVA---AL-------------EAEAIAVVADVSDPKAV   66 (241)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---TC-------------CSSEEEEECCTTSHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH---Hc-------------CCceEEEEecCCCHHHH
Confidence            478999999999999999999999999999999999987765543   22             15788999999999888


Q ss_pred             HHHh-------cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHHHcC--CCEEEEEccCCCCCCCCch
Q 016901          158 EPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIAK--VNHFIMVSSLGTNKFGFPA  222 (380)
Q Consensus       158 ~~a~-------~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~~~~--v~r~V~~SS~~~~~~~~~~  222 (380)
                      ++++       +++|++|||||......      .++...+++|+.+...+.+++...-  -+.++++|+.+...     
T Consensus        67 ~~~~~~i~~~~g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~~-----  141 (241)
T d2a4ka1          67 EAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLG-----  141 (241)
T ss_dssp             HHHHHHHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCC-----
T ss_pred             HHHHHHHHHHhCCccEeccccccccccchhhhhccccccccccccccccccccccccccccccceeecccccccc-----
Confidence            7765       57999999998653221      1233447899999999998875432  33566666654321     


Q ss_pred             hhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHHH
Q 016901          223 AILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACM  295 (380)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~  295 (380)
                        .+....|+.+|++.|.+.+       .+|+++++|.||.+-++...................+.+..++|+|+++..+
T Consensus       142 --~~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~fL  219 (241)
T d2a4ka1         142 --AFGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGASPLGRAGRPEEVAQAALFL  219 (241)
T ss_dssp             --HHHHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHHHHHHHHHTSTTCSCBCHHHHHHHHHHH
T ss_pred             --ccCccccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhhhHhHHHHHHhCCCCCCCcCHHHHHHHHHHH
Confidence              1234569999999998876       3789999999999976632111111111111122334577999999999999


Q ss_pred             HhCC-CCccCcEEEEecCC
Q 016901          296 AKNR-SLSYCKVVEVIAET  313 (380)
Q Consensus       296 l~~~-~~~~~~~~ni~~~~  313 (380)
                      +.+. ....|+++.+-+|.
T Consensus       220 ~S~~s~~itG~~i~vDGG~  238 (241)
T d2a4ka1         220 LSEESAYITGQALYVDGGR  238 (241)
T ss_dssp             HSGGGTTCCSCEEEESTTT
T ss_pred             hcchhCCCcCceEEeCCCc
Confidence            9754 34578888887775

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.87  E-value=1.5e-21  Score=177.22  Aligned_cols=224  Identities=13%  Similarity=0.080  Sum_probs=157.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHh-hhhcccccccCCCCCCceEEEEcCCCChh
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQ-MKLDGELANKGIQPVEMLELVECDLEKRV  155 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~  155 (380)
                      +.++|++|||||+++||++++++|+++|++|++.+|+.++..+..+++.+ .+             .++..+++|++|++
T Consensus         6 ~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g-------------~~~~~~~~Dv~~~~   72 (260)
T d1h5qa_           6 SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFG-------------VKTKAYQCDVSNTD   72 (260)
T ss_dssp             CCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHT-------------CCEEEEECCTTCHH
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhC-------------CceEEEEccCCCHH
Confidence            35789999999999999999999999999999999999888776665533 22             57889999999998


Q ss_pred             cHHHHh-------cCCCEEEEccccCcccc------CCCCCcchhhHHHHHHHHHHHH----H-cCCCEEEEEccCCCCC
Q 016901          156 QIEPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----I-AKVNHFIMVSSLGTNK  217 (380)
Q Consensus       156 ~~~~a~-------~~~d~Vi~~Ag~~~~~~------~~~~~~~~~nv~g~~~ll~a~~----~-~~v~r~V~~SS~~~~~  217 (380)
                      ++++++       +.+|++|||||......      .++...+++|+.|+.++.+++.    + .+.++++.+|+.....
T Consensus        73 ~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~  152 (260)
T d1h5qa_          73 IVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQI  152 (260)
T ss_dssp             HHHHHHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS
T ss_pred             HHHHHHHHHHHHhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeecccccc
Confidence            887766       46999999998653221      1334457899999888776553    2 3345677777654422


Q ss_pred             CCCc-hhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHH
Q 016901          218 FGFP-AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVA  289 (380)
Q Consensus       218 ~~~~-~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA  289 (380)
                      .... .........|+.+|.+.+.+.+       .+|++++.|.||.+..+...................+.+..++|+|
T Consensus       153 ~~~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~R~g~pedvA  232 (260)
T d1h5qa_         153 INQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASNIPLNRFAQPEEMT  232 (260)
T ss_dssp             CCEEETTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHTCTTSSCBCGGGGH
T ss_pred             ccccccccCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccCHHHHHHHHhcCCCCCCcCHHHHH
Confidence            1111 0111233579999999997765       3799999999999987643211111000011122234567899999


Q ss_pred             HHHHHHHhCCC-CccCcEEEEecCC
Q 016901          290 ELLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       290 ~~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      +++..++.+.. +..|+++.+-+|.
T Consensus       233 ~~v~fL~S~~s~~itG~~i~VDGG~  257 (260)
T d1h5qa_         233 GQAILLLSDHATYMTGGEYFIDGGQ  257 (260)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEECTTG
T ss_pred             HHHHHHhcchhCCCcCceEEECCCe
Confidence            99999986543 3578889887774

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.87  E-value=4.6e-21  Score=171.31  Aligned_cols=208  Identities=14%  Similarity=0.114  Sum_probs=150.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCCh-hc
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR-VQ  156 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~-~~  156 (380)
                      +++|++|||||+++||+++++.|+++|++|++.+|+++.+++                      ...+++.+|+++. +.
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~----------------------~~~~~~~~Dv~~~~~~   59 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKR----------------------SGHRYVVCDLRKDLDL   59 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH----------------------TCSEEEECCTTTCHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHh----------------------cCCcEEEcchHHHHHH
Confidence            368999999999999999999999999999999999765543                      3456788999863 45


Q ss_pred             HHHHhcCCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCCCCchhhhc
Q 016901          157 IEPALGNASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGFPAAILN  226 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~~~~~~~~~  226 (380)
                      +.+.++++|++|||||.......      ++...+++|+.++..+++++    ++.+..++|++||.......      .
T Consensus        60 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~------~  133 (234)
T d1o5ia_          60 LFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPI------E  133 (234)
T ss_dssp             HHHHSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC------T
T ss_pred             HHHHhCCCcEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccc------c
Confidence            55667889999999996533221      23344789999887777655    45566799999997653321      2


Q ss_pred             hhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccc-cccceeeccCCcccCCCCCHHHHHHHHHHHHhC
Q 016901          227 LFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-ETHNITLSQEDTLFGGQVSNLQVAELLACMAKN  298 (380)
Q Consensus       227 ~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~-~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~  298 (380)
                      ....|..+|.+.+.+.+       .+|++++.|.||++..+..... ..............+.+..++|+|.++..++.+
T Consensus       134 ~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~S~  213 (234)
T d1o5ia_         134 NLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFLCSE  213 (234)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSG
T ss_pred             ccccchhHHHHHHHHHHHHHHHhcccCeEEeecccCccchhhhhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCh
Confidence            33469999999987765       3799999999999988743211 000111111222334578999999999999865


Q ss_pred             C-CCccCcEEEEecCC
Q 016901          299 R-SLSYCKVVEVIAET  313 (380)
Q Consensus       299 ~-~~~~~~~~ni~~~~  313 (380)
                      . .+..|+++.+-+|-
T Consensus       214 ~s~~itG~~i~vDGG~  229 (234)
T d1o5ia_         214 KASYLTGQTIVVDGGL  229 (234)
T ss_dssp             GGTTCCSCEEEESTTC
T ss_pred             hhcCCcCcEEEECccc
Confidence            3 33578999887774

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.86  E-value=2.9e-21  Score=176.87  Aligned_cols=213  Identities=12%  Similarity=0.045  Sum_probs=152.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      +++|+||||||+++||+++++.|+++|++|++++|+.++++++.+.+.                .++..+.+|++|.+++
T Consensus         3 L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~----------------~~~~~~~~Dv~~~~~~   66 (276)
T d1bdba_           3 LKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHG----------------DNVLGIVGDVRSLEDQ   66 (276)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG----------------GGEEEEECCTTCHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC----------------CCeeEEecccccHHHH
Confidence            578999999999999999999999999999999999887776554321                5789999999999887


Q ss_pred             HHHh-------cCCCEEEEccccCccccC-----------CCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCC
Q 016901          158 EPAL-------GNASVVICCIGASEKEVF-----------DITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGT  215 (380)
Q Consensus       158 ~~a~-------~~~d~Vi~~Ag~~~~~~~-----------~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~  215 (380)
                      ++++       +.+|++|||||.......           ++...+++|+.|+..+++++    ++.+ .++|++||...
T Consensus        67 ~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g~iI~i~S~~~  145 (276)
T d1bdba_          67 KQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR-GNVIFTISNAG  145 (276)
T ss_dssp             HHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGG
T ss_pred             HHHHHHHHHHhCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-CCceeeeechh
Confidence            7765       579999999996432111           12344789999988877665    3444 57888888654


Q ss_pred             CCCCCchhhhchhhHHHHHHHHHHHHHHH------CCCCEEEEecCcccCCCccccc----ccce------eeccCCccc
Q 016901          216 NKFGFPAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKE----THNI------TLSQEDTLF  279 (380)
Q Consensus       216 ~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~------~g~~~~ivRpg~v~gp~~~~~~----~~~~------~~~~~~~~~  279 (380)
                      ...      ......|+.+|.+.+.+.+.      .+++++.|.||.|..+......    ....      .........
T Consensus       146 ~~~------~~~~~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl  219 (276)
T d1bdba_         146 FYP------NGGGPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPI  219 (276)
T ss_dssp             TST------TSSCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTT
T ss_pred             ccC------CCCCchHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCC
Confidence            321      12235699999999877652      4599999999999766321100    0000      001111223


Q ss_pred             CCCCCHHHHHHHHHHHHhC--CCCccCcEEEEecCC
Q 016901          280 GGQVSNLQVAELLACMAKN--RSLSYCKVVEVIAET  313 (380)
Q Consensus       280 ~~~i~~~DvA~~i~~~l~~--~~~~~~~~~ni~~~~  313 (380)
                      +.+..++|+|.+++.++..  ..+..|+++++-+|-
T Consensus       220 gR~g~peeva~~v~fL~S~~~a~~itG~~i~VDGG~  255 (276)
T d1bdba_         220 GRMPEVEEYTGAYVFFATRGDAAPATGALLNYDGGL  255 (276)
T ss_dssp             SSCCCGGGGSHHHHHHHCHHHHTTCSSCEEEESSSG
T ss_pred             CCCcCHHHHHHHHHHHcCCcccCCeeCcEEEECcCh
Confidence            4467899999999998853  344679999988764

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.86  E-value=2.4e-20  Score=170.33  Aligned_cols=219  Identities=16%  Similarity=0.155  Sum_probs=156.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCc-hhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV-QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~  155 (380)
                      ++++|++|||||+++||+++++.|+++|++|++++|+. +..++..+.+++.+             .++.++++|++|++
T Consensus        15 sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g-------------~~~~~~~~D~~~~~   81 (272)
T d1g0oa_          15 SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNG-------------SDAACVKANVGVVE   81 (272)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-------------CCEEEEECCTTCHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhC-------------CceeeEeCCCCCHH
Confidence            56899999999999999999999999999999988764 55666666665533             67899999999988


Q ss_pred             cHHHHh-------cCCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHHHHcC--CCEEEEEccCCCCCCCC
Q 016901          156 QIEPAL-------GNASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAATIAK--VNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       156 ~~~~a~-------~~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~~~~~--v~r~V~~SS~~~~~~~~  220 (380)
                      ++.+.+       +++|++|||+|.......      ++...+++|+.++..+++++...=  -+++++++|....... 
T Consensus        82 ~v~~~~~~~~~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~~~-  160 (272)
T d1g0oa_          82 DIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKA-  160 (272)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSS-
T ss_pred             HHHHHHHHHHHHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccccccccccccccccc-
Confidence            877765       579999999986533221      233447889999999998886432  2477888775432211 


Q ss_pred             chhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccc------ccccee-------eccCCcccC
Q 016901          221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK------ETHNIT-------LSQEDTLFG  280 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~------~~~~~~-------~~~~~~~~~  280 (380)
                          ......|+.+|.+.+.+.+       .+|++++.|.||++.++.....      ......       ........+
T Consensus       161 ----~~~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Plg  236 (272)
T d1g0oa_         161 ----VPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLR  236 (272)
T ss_dssp             ----CSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTC
T ss_pred             ----ccchhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCCC
Confidence                1233469999999998876       3799999999999976531100      000000       001122235


Q ss_pred             CCCCHHHHHHHHHHHHhCCC-CccCcEEEEecCC
Q 016901          281 GQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       281 ~~i~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      .+..++|+|.++..++.+.. ...|+++.+-+|.
T Consensus       237 R~~~peevA~~v~fL~s~~s~~itG~~i~vDGG~  270 (272)
T d1g0oa_         237 RVGLPIDIARVVCFLASNDGGWVTGKVIGIDGGA  270 (272)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CCcCHHHHHHHHHHHhCchhcCccCceEeECCCC
Confidence            67899999999999997533 3478888888775

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.86  E-value=7.1e-21  Score=172.69  Aligned_cols=219  Identities=15%  Similarity=0.118  Sum_probs=154.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-CchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVR-SVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~  155 (380)
                      ++.+|+||||||+++||+++++.|+++|++|++..| +.+..+.+.+++.+.+             .++..+++|++|.+
T Consensus         3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g-------------~~~~~~~~D~~~~~   69 (259)
T d1ja9a_           3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLG-------------AQGVAIQADISKPS   69 (259)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-------------CCEEEEECCTTSHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcC-------------CCceEecCCCCCHH
Confidence            458899999999999999999999999999998655 5555677777776543             67899999999988


Q ss_pred             cHHHHh-------cCCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHHHHcC--CCEEEEEccCCCCCCCC
Q 016901          156 QIEPAL-------GNASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAATIAK--VNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       156 ~~~~a~-------~~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~~~~~--v~r~V~~SS~~~~~~~~  220 (380)
                      ++++++       +++|++|||||.......      .+...+++|+.+..++++++...-  -+++++++|......+.
T Consensus        70 ~v~~~~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~~~  149 (259)
T d1ja9a_          70 EVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGI  149 (259)
T ss_dssp             HHHHHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSC
T ss_pred             HHHHHHHHHHHHcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccccCC
Confidence            887766       479999999996533221      223447899999988888876421  23666676654322222


Q ss_pred             chhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccc---cc----ccce------eeccCCcccC
Q 016901          221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAY---KE----THNI------TLSQEDTLFG  280 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~---~~----~~~~------~~~~~~~~~~  280 (380)
                      +     ....|+.+|.+.+.+.+       ..|++++.|.||++.++....   ..    ....      .........+
T Consensus       150 ~-----~~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~  224 (259)
T d1ja9a_         150 P-----NHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLK  224 (259)
T ss_dssp             C-----SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTS
T ss_pred             C-----CchhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCC
Confidence            2     23469999999998776       379999999999997652110   00    0000      0001112234


Q ss_pred             CCCCHHHHHHHHHHHHhCCC-CccCcEEEEecCC
Q 016901          281 GQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       281 ~~i~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      .+..++|+|++++.++.+.. ...|+++.+-+|.
T Consensus       225 R~g~p~eVa~~v~fL~S~~a~~itG~~i~vDGG~  258 (259)
T d1ja9a_         225 RIGYPADIGRAVSALCQEESEWINGQVIKLTGGG  258 (259)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CCcCHHHHHHHHHHHhCchhcCCcCceEEeCCCC
Confidence            57889999999999997654 3478888887764

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.85  E-value=5.2e-21  Score=173.30  Aligned_cols=216  Identities=12%  Similarity=0.091  Sum_probs=149.3

Q ss_pred             CCCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh
Q 016901           78 KDDNLAFVAGATG--KVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (380)
Q Consensus        78 ~~~~~vlVtGatG--~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~  155 (380)
                      +++|++|||||+|  +||++++++|+++|++|++..|++...+...+.....              .+..++++|++|.+
T Consensus         6 L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~--------------~~~~~~~~D~~~~~   71 (256)
T d1ulua_           6 LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEAL--------------GGALLFRADVTQDE   71 (256)
T ss_dssp             CTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHT--------------TCCEEEECCTTCHH
T ss_pred             CCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhcc--------------CcccccccccCCHH
Confidence            5789999999998  8999999999999999999888876544433322221              46778999999998


Q ss_pred             cHHHHh-------cCCCEEEEccccCccc-----c-----CCCCCcchhhHHHHHHHHHHHHHcC--CCEEEEEccCCCC
Q 016901          156 QIEPAL-------GNASVVICCIGASEKE-----V-----FDITGPYRIDFQATKNLVDAATIAK--VNHFIMVSSLGTN  216 (380)
Q Consensus       156 ~~~~a~-------~~~d~Vi~~Ag~~~~~-----~-----~~~~~~~~~nv~g~~~ll~a~~~~~--v~r~V~~SS~~~~  216 (380)
                      ++++++       +++|++|||||.....     .     .++...+++|+.++..+++++...-  -+++|++||....
T Consensus        72 ~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~  151 (256)
T d1ulua_          72 ELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASE  151 (256)
T ss_dssp             HHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGT
T ss_pred             HHHHHHHHHHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhc
Confidence            887765       5799999999864211     1     1122347889999999888775321  2589999997663


Q ss_pred             CCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccc--cceeeccCCcccCCCCCHHH
Q 016901          217 KFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET--HNITLSQEDTLFGGQVSNLQ  287 (380)
Q Consensus       217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~--~~~~~~~~~~~~~~~i~~~D  287 (380)
                      ..      ......|+.+|.+.+.+.+       .+|++++.|.||.+..+.......  ............+.+..++|
T Consensus       152 ~~------~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~pl~R~~~ped  225 (256)
T d1ulua_         152 KV------VPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEE  225 (256)
T ss_dssp             SB------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHHHHHHHHHHSTTSSCCCHHH
T ss_pred             CC------CCCchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHHHHHHHHhcCCCCCCcCHHH
Confidence            32      1234579999999998876       379999999999998764321110  00000111122345789999


Q ss_pred             HHHHHHHHHhCCC-CccCcEEEEecCC
Q 016901          288 VAELLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       288 vA~~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      +|+++..++.+.. +..|+++.+-+|.
T Consensus       226 vA~~v~fL~S~~s~~itG~~i~VDGG~  252 (256)
T d1ulua_         226 VGNLGLFLLSPLASGITGEVVYVDAGY  252 (256)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHhCchhCCccCCeEEECcCE
Confidence            9999999997543 3578888887764

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.85  E-value=1.2e-20  Score=171.21  Aligned_cols=216  Identities=13%  Similarity=0.083  Sum_probs=156.4

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHH---CCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCC
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLK---LGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK  153 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~---~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d  153 (380)
                      .+++|+++||||+++||++++++|++   +|++|+++.|+.++++++.+++...+.           ..++.++.+|++|
T Consensus         3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~-----------~~~~~~~~~Dvs~   71 (259)
T d1oaaa_           3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQP-----------DLKVVLAAADLGT   71 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCT-----------TSEEEEEECCTTS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcC-----------CceEEEEEccCCC
Confidence            45789999999999999999999986   799999999999999888877754321           1478899999999


Q ss_pred             hhcHHHHhc-----------CCCEEEEccccCcccc---------CCCCCcchhhHHHHHHHHHHHHHc----C--CCEE
Q 016901          154 RVQIEPALG-----------NASVVICCIGASEKEV---------FDITGPYRIDFQATKNLVDAATIA----K--VNHF  207 (380)
Q Consensus       154 ~~~~~~a~~-----------~~d~Vi~~Ag~~~~~~---------~~~~~~~~~nv~g~~~ll~a~~~~----~--v~r~  207 (380)
                      +++++++++           ..|++|||||......         .++...+++|+.++..+.+++...    +  ..++
T Consensus        72 ~~~v~~l~~~~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~I  151 (259)
T d1oaaa_          72 EAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTV  151 (259)
T ss_dssp             HHHHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEE
T ss_pred             HHHHHHHHHHHHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccc
Confidence            988887751           3679999998642211         123345889999999999888542    2  2489


Q ss_pred             EEEccCCCCCCCCchhhhchhhHHHHHHHHHHHHHH-----HCCCCEEEEecCcccCCCccccc--ccc---eeeccCCc
Q 016901          208 IMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-----ASGLPYTIVRPGGMERPTDAYKE--THN---ITLSQEDT  277 (380)
Q Consensus       208 V~~SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-----~~g~~~~ivRpg~v~gp~~~~~~--~~~---~~~~~~~~  277 (380)
                      |++||......      ......|+.+|.+.+.+.+     .+|++++.|.||.|.++......  ...   ........
T Consensus       152 v~isS~~~~~~------~~~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~  225 (259)
T d1oaaa_         152 VNISSLCALQP------YKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLK  225 (259)
T ss_dssp             EEECCGGGTSC------CTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHH
T ss_pred             cccccccccCC------CccchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcC
Confidence            99999765332      1234579999999997765     38999999999999876321100  000   00000111


Q ss_pred             ccCCCCCHHHHHHHHHHHHhCCCCccCcEEEE
Q 016901          278 LFGGQVSNLQVAELLACMAKNRSLSYCKVVEV  309 (380)
Q Consensus       278 ~~~~~i~~~DvA~~i~~~l~~~~~~~~~~~ni  309 (380)
                      ..+....++|+|++++.++.+..+..|+++++
T Consensus       226 ~~~r~~~p~evA~~i~~ll~~~s~~TG~~idv  257 (259)
T d1oaaa_         226 SDGALVDCGTSAQKLLGLLQKDTFQSGAHVDF  257 (259)
T ss_dssp             HTTCSBCHHHHHHHHHHHHHHCCSCTTEEEET
T ss_pred             CCCCCCCHHHHHHHHHHHhhhccCCCCCeEEe
Confidence            22345799999999999998766667777765

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.84  E-value=1.1e-20  Score=174.93  Aligned_cols=204  Identities=16%  Similarity=0.080  Sum_probs=146.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCc---------hhHHHHHHHHHhhhhcccccccCCCCCCceEEE
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV---------QRAENLVQSVKQMKLDGELANKGIQPVEMLELV  147 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  147 (380)
                      ++++|++|||||+++||+++++.|+++|++|++.+|+.         ..++++.+++.                ......
T Consensus         4 ~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~   67 (302)
T d1gz6a_           4 RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIR----------------RRGGKA   67 (302)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHH----------------HTTCEE
T ss_pred             CcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHh----------------hccccc
Confidence            45789999999999999999999999999999987654         33444444333                233455


Q ss_pred             EcCCCChhcHHHHh-------cCCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHH----HHcCCCEEEEE
Q 016901          148 ECDLEKRVQIEPAL-------GNASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAA----TIAKVNHFIMV  210 (380)
Q Consensus       148 ~~Dl~d~~~~~~a~-------~~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~  210 (380)
                      .+|+.|.+++++++       +++|++|||||.......      ++...+++|+.|+.++++++    ++.+-++||++
T Consensus        68 ~~d~~~~~~~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~i  147 (302)
T d1gz6a_          68 VANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMT  147 (302)
T ss_dssp             EEECCCGGGHHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred             ccccchHHHHHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEe
Confidence            67888877666544       579999999996533221      33445889999988887765    45666799999


Q ss_pred             ccCCCCCCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCC
Q 016901          211 SSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQV  283 (380)
Q Consensus       211 SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i  283 (380)
                      ||......      ......|+.+|...+.+.+       .+|++++.|.||.+..+......          ......+
T Consensus       148 sS~~~~~~------~~~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~~----------~~~~~~~  211 (302)
T d1gz6a_         148 ASASGIYG------NFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVMP----------EDLVEAL  211 (302)
T ss_dssp             CCHHHHHC------CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGSC----------HHHHHHS
T ss_pred             CChhhcCC------CCCcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcCc----------HhhHhcC
Confidence            99754221      1233579999999998765       37999999999988654321110          0112346


Q ss_pred             CHHHHHHHHHHHHhCCCCccCcEEEEecC
Q 016901          284 SNLQVAELLACMAKNRSLSYCKVVEVIAE  312 (380)
Q Consensus       284 ~~~DvA~~i~~~l~~~~~~~~~~~ni~~~  312 (380)
                      .++|+|.+++.++.+.....|+++.+.+|
T Consensus       212 ~PedvA~~v~fL~S~~a~itG~~i~vdGG  240 (302)
T d1gz6a_         212 KPEYVAPLVLWLCHESCEENGGLFEVGAG  240 (302)
T ss_dssp             CGGGTHHHHHHHTSTTCCCCSCEEEEETT
T ss_pred             CHHHHHHHHHHHcCCCcCCCCcEEEeCCC
Confidence            78999999999987555457888877765

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=2.4e-20  Score=167.70  Aligned_cols=214  Identities=14%  Similarity=0.101  Sum_probs=154.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ++++|++|||||+++||+++++.|+++|++|++.+|++++++++.+                  ..++....+|+.+.+.
T Consensus         3 ~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~------------------~~~~~~~~~d~~~~~~   64 (245)
T d2ag5a1           3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK------------------YPGIQTRVLDVTKKKQ   64 (245)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGG------------------STTEEEEECCTTCHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh------------------ccCCceeeeecccccc
Confidence            4688999999999999999999999999999999999876554321                  1567888899988766


Q ss_pred             HHHHh---cCCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHHH----HcCCCEEEEEccCCCCCCCCchh
Q 016901          157 IEPAL---GNASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFPAA  223 (380)
Q Consensus       157 ~~~a~---~~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~~----~~~v~r~V~~SS~~~~~~~~~~~  223 (380)
                      ++...   .++|++|||||.......      ++...+++|+.++..+.+++.    +.+..++|++||......+    
T Consensus        65 ~~~~~~~~~~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~----  140 (245)
T d2ag5a1          65 IDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKG----  140 (245)
T ss_dssp             HHHHHHHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBC----
T ss_pred             ccccccccccceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCC----
Confidence            65544   679999999996543221      233447899999888877653    4456699999986542211    


Q ss_pred             hhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccccccc------ceeeccCCcccCCCCCHHHHHH
Q 016901          224 ILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH------NITLSQEDTLFGGQVSNLQVAE  290 (380)
Q Consensus       224 ~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~------~~~~~~~~~~~~~~i~~~DvA~  290 (380)
                       ......|+.+|.+.+.+++       .+|++++.|.||.+.+|........      ...........+.+..++|+|+
T Consensus       141 -~~~~~~Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedva~  219 (245)
T d2ag5a1         141 -VVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAM  219 (245)
T ss_dssp             -CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHH
T ss_pred             -ccchhHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHH
Confidence             1334579999999998876       3799999999999987642110000      0000011122345678999999


Q ss_pred             HHHHHHhCC-CCccCcEEEEecCC
Q 016901          291 LLACMAKNR-SLSYCKVVEVIAET  313 (380)
Q Consensus       291 ~i~~~l~~~-~~~~~~~~ni~~~~  313 (380)
                      ++..++.+. ....|+++.+-+|.
T Consensus       220 ~v~fL~s~~s~~iTG~~i~VDGG~  243 (245)
T d2ag5a1         220 LCVYLASDESAYVTGNPVIIDGGW  243 (245)
T ss_dssp             HHHHHHSGGGTTCCSCEEEECTTG
T ss_pred             HHHHHhChhhCCCcCceEEeCCCc
Confidence            999999754 34578888887764

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.84  E-value=4.9e-21  Score=173.03  Aligned_cols=208  Identities=14%  Similarity=0.081  Sum_probs=147.3

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHHh
Q 016901           82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPAL  161 (380)
Q Consensus        82 ~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a~  161 (380)
                      ++|||||+++||+.+++.|+++|++|++.+|+.++.+++.....                   .+..+|++|.+++++++
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~-------------------~~~~~dv~~~~~~~~~~   62 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAE-------------------TYPQLKPMSEQEPAELI   62 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHH-------------------HCTTSEECCCCSHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhC-------------------cEEEeccCCHHHHHHHH
Confidence            69999999999999999999999999999999887766544222                   12357888776666554


Q ss_pred             -------cCCCEEEEccccCcc-ccC------CCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCCCCchh
Q 016901          162 -------GNASVVICCIGASEK-EVF------DITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGFPAA  223 (380)
Q Consensus       162 -------~~~d~Vi~~Ag~~~~-~~~------~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~~~~~~  223 (380)
                             +++|++|||||.... ...      ++...+++|+.++.++++++    ++.+-.+||++||.......    
T Consensus        63 ~~~~~~~G~iDiLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~----  138 (252)
T d1zmta1          63 EAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPW----  138 (252)
T ss_dssp             HHHHHHHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCC----
T ss_pred             HHHHHHcCCCCEEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeeccccccccccc----
Confidence                   579999999985422 111      23344788999988777665    45566799999998763321    


Q ss_pred             hhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccc-ccc-------ceeeccCCcccCCCCCHHHH
Q 016901          224 ILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-ETH-------NITLSQEDTLFGGQVSNLQV  288 (380)
Q Consensus       224 ~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~-~~~-------~~~~~~~~~~~~~~i~~~Dv  288 (380)
                        .....|+.+|...+.+.+       .+|++++.|.||++.++..... ...       ...........+.+..++|+
T Consensus       139 --~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~R~g~pedv  216 (252)
T d1zmta1         139 --KELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKEL  216 (252)
T ss_dssp             --TTCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHHH
T ss_pred             --ccccccccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCCCCcCHHHH
Confidence              223579999999998766       3799999999999987642110 000       00000111223456799999


Q ss_pred             HHHHHHHHhCCC-CccCcEEEEecCCC
Q 016901          289 AELLACMAKNRS-LSYCKVVEVIAETT  314 (380)
Q Consensus       289 A~~i~~~l~~~~-~~~~~~~ni~~~~~  314 (380)
                      |.+++.++.+.. +..|+++.+-+|-.
T Consensus       217 A~~v~fL~S~~s~~iTG~~i~vdGG~~  243 (252)
T d1zmta1         217 GELVAFLASGSCDYLTGQVFWLAGGFP  243 (252)
T ss_dssp             HHHHHHHHTTSCGGGTTCEEEESTTCC
T ss_pred             HHHHHHHhCchhcCCcCCeEEECCCce
Confidence            999999997654 35789999888753

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=5.6e-20  Score=165.54  Aligned_cols=210  Identities=15%  Similarity=0.118  Sum_probs=149.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      +.++|++|||||+++||++++++|+++|++|++++|+.++.+++.+++.                .+......|+.+...
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~----------------~~~~~~~~~~~~~~~   65 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLG----------------NNCVFAPADVTSEKD   65 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHC----------------TTEEEEECCTTCHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC----------------CCccccccccccccc
Confidence            4589999999999999999999999999999999999988877665442                567888999998766


Q ss_pred             HHHHh-------cCCCEEEEccccCcccc------------CCCCCcchhhHHHHHHHHHHHHHc----------CCCEE
Q 016901          157 IEPAL-------GNASVVICCIGASEKEV------------FDITGPYRIDFQATKNLVDAATIA----------KVNHF  207 (380)
Q Consensus       157 ~~~a~-------~~~d~Vi~~Ag~~~~~~------------~~~~~~~~~nv~g~~~ll~a~~~~----------~v~r~  207 (380)
                      +++.+       ...|.++++++......            ..+...+++|+.++.++.+++...          +..+|
T Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~I  145 (248)
T d2o23a1          66 VQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVI  145 (248)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEE
T ss_pred             ccccccccccccccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEE
Confidence            55443       46899999886432111            122334789999999998887432          33489


Q ss_pred             EEEccCCCCCCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccc-cccceeeccCCccc
Q 016901          208 IMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-ETHNITLSQEDTLF  279 (380)
Q Consensus       208 V~~SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~-~~~~~~~~~~~~~~  279 (380)
                      |++||......      ......|+.+|.+.+.+.+       .+|++++.|.||.+.++..... ....-.+.......
T Consensus       146 i~isS~~~~~~------~~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~  219 (248)
T d2o23a1         146 INTASVAAFEG------QVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFP  219 (248)
T ss_dssp             EEECCTHHHHC------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----------CHHHHTCSSS
T ss_pred             EEecchhhccC------CCCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCCHHHHHHHHhcCCCC
Confidence            99999865321      1234579999999998876       3799999999999987743211 11111111111222


Q ss_pred             CCCCCHHHHHHHHHHHHhCCCCccCcEEEE
Q 016901          280 GGQVSNLQVAELLACMAKNRSLSYCKVVEV  309 (380)
Q Consensus       280 ~~~i~~~DvA~~i~~~l~~~~~~~~~~~ni  309 (380)
                      +.+..++|+|+++..++++. +..|++++|
T Consensus       220 ~R~g~peevA~~v~fL~s~~-~itGq~I~v  248 (248)
T d2o23a1         220 SRLGDPAEYAHLVQAIIENP-FLNGEVIRL  248 (248)
T ss_dssp             CSCBCHHHHHHHHHHHHHCT-TCCSCEEEE
T ss_pred             CCCcCHHHHHHHHHHHHhCC-CCCceEeEC
Confidence            44679999999999999864 467887765

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.84  E-value=2.3e-20  Score=168.72  Aligned_cols=214  Identities=14%  Similarity=0.068  Sum_probs=149.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCC-Chhc
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLE-KRVQ  156 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~-d~~~  156 (380)
                      +++|+||||||+++||..++++|+++|++|+++.|+.++.+.+.+.....            ...++.++.+|++ +.++
T Consensus         3 l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~------------~~~~~~~~~~d~~~~~~~   70 (254)
T d1sbya1           3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAIN------------PKVNITFHTYDVTVPVAE   70 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHC------------TTSEEEEEECCTTSCHHH
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhC------------CCCCEEEEEeecCCCHHH
Confidence            57899999999999999999999999999999988877655543322211            1257899999998 5444


Q ss_pred             HHHHh-------cCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHH----c---CCCEEEEEccCCCCCCCCch
Q 016901          157 IEPAL-------GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATI----A---KVNHFIMVSSLGTNKFGFPA  222 (380)
Q Consensus       157 ~~~a~-------~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~----~---~v~r~V~~SS~~~~~~~~~~  222 (380)
                      +++++       +++|++|||||...  ..+++..+++|+.|+.++.+++..    .   ...++|++||......    
T Consensus        71 ~~~~~~~~~~~~g~iDilvnnAG~~~--~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~----  144 (254)
T d1sbya1          71 SKKLLKKIFDQLKTVDILINGAGILD--DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNA----  144 (254)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCC--TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC----
T ss_pred             HHHHHHHHHHHcCCCCEEEeCCCCCC--HHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccC----
Confidence            55444       67999999999653  344556689999999888887642    2   2358999999776432    


Q ss_pred             hhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccccccc-cee-eccCCcccCCCCCHHHHHHHHH
Q 016901          223 AILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH-NIT-LSQEDTLFGGQVSNLQVAELLA  293 (380)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~-~~~-~~~~~~~~~~~i~~~DvA~~i~  293 (380)
                        ......|+.+|.+...+.+       .+|++++.|.||+|.+|........ ... .............++++|++++
T Consensus       145 --~~~~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~~~~  222 (254)
T d1sbya1         145 --IHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFV  222 (254)
T ss_dssp             --CTTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCCEEHHHHHHHHH
T ss_pred             --CCCCHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHHHHHHhccccCCCCCHHHHHHHHH
Confidence              1234579999999887765       4799999999999987621100000 000 0000001112357899999999


Q ss_pred             HHHhCCCCccCcEEEEecCC
Q 016901          294 CMAKNRSLSYCKVVEVIAET  313 (380)
Q Consensus       294 ~~l~~~~~~~~~~~ni~~~~  313 (380)
                      .++++..  .|+++.+-+|.
T Consensus       223 ~~~~~~~--tG~vi~vdgG~  240 (254)
T d1sbya1         223 KAIEANK--NGAIWKLDLGT  240 (254)
T ss_dssp             HHHHHCC--TTCEEEEETTE
T ss_pred             HhhhCCC--CCCEEEECCCE
Confidence            8887653  58888887774

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.83  E-value=1.3e-19  Score=167.30  Aligned_cols=219  Identities=13%  Similarity=0.135  Sum_probs=152.4

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ++++|++|||||+|+||++++++|+++|++|++++|+..+..+..+.+....            ..++.++.+|++|.++
T Consensus        22 ~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~------------g~~~~~~~~D~~~~~~   89 (294)
T d1w6ua_          22 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT------------GNKVHAIQCDVRDPDM   89 (294)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH------------SSCEEEEECCTTCHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhc------------CCceEEEEecccChHH
Confidence            4588999999999999999999999999999999999988877766554321            1578899999999988


Q ss_pred             HHHHh-------cCCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHHH-----HcCCCEEEEEccCCCCCC
Q 016901          157 IEPAL-------GNASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAAT-----IAKVNHFIMVSSLGTNKF  218 (380)
Q Consensus       157 ~~~a~-------~~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~~-----~~~v~r~V~~SS~~~~~~  218 (380)
                      +++++       +++|++|||||.......      ++...+.+|+.+...+...+.     ..+...++.+|+......
T Consensus        90 v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~  169 (294)
T d1w6ua_          90 VQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETG  169 (294)
T ss_dssp             HHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHC
T ss_pred             HHHHhhhhhhhccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhc
Confidence            87665       579999999996543322      122235667777666654432     233446777777543211


Q ss_pred             CCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccc--cccc-eeeccCCcccCCCCCHHHH
Q 016901          219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK--ETHN-ITLSQEDTLFGGQVSNLQV  288 (380)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~--~~~~-~~~~~~~~~~~~~i~~~Dv  288 (380)
                            ......|+.+|.+.+.+.+       .+|++++.|.||.+.++.....  .... ..........+.+..++|+
T Consensus       170 ------~~~~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedi  243 (294)
T d1w6ua_         170 ------SGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEEL  243 (294)
T ss_dssp             ------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHH
T ss_pred             ------ccccchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCCCCCCCHHHH
Confidence                  1223469999999998876       3789999999999987642111  0100 0001112233457899999


Q ss_pred             HHHHHHHHhCCC-CccCcEEEEecCC
Q 016901          289 AELLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       289 A~~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      |+++..++.+.. +..|+++.+-+|.
T Consensus       244 A~~v~fL~sd~s~~itG~~i~vDGG~  269 (294)
T d1w6ua_         244 ANLAAFLCSDYASWINGAVIKFDGGE  269 (294)
T ss_dssp             HHHHHHHTSGGGTTCCSCEEEESTTH
T ss_pred             HHHHHHHhCchhcCCCCcEEEECCCh
Confidence            999999997543 3578999888874

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.81  E-value=2.1e-19  Score=162.76  Aligned_cols=199  Identities=19%  Similarity=0.190  Sum_probs=141.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCchh---HHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCCh
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQR---AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~  154 (380)
                      ...++|||||+|+||++++++|+++|+ +|+++.|+..+   ..++.++++..+             .++.++.+|++|.
T Consensus         8 p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g-------------~~v~~~~~Dv~d~   74 (259)
T d2fr1a1           8 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALG-------------ARTTVAACDVTDR   74 (259)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTT-------------CEEEEEECCTTCH
T ss_pred             CcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhcc-------------ccccccccccchH
Confidence            346999999999999999999999998 58888887544   334444333322             5799999999999


Q ss_pred             hcHHHHhc------CCCEEEEccccCccccCC------CCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCCch
Q 016901          155 VQIEPALG------NASVVICCIGASEKEVFD------ITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPA  222 (380)
Q Consensus       155 ~~~~~a~~------~~d~Vi~~Ag~~~~~~~~------~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~~  222 (380)
                      ++++++++      ++|.||||+|........      +...+++|+.|+.++.+++...+.++||++||.......   
T Consensus        75 ~~~~~~~~~i~~~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~g~---  151 (259)
T d2fr1a1          75 ESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGA---  151 (259)
T ss_dssp             HHHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCC---
T ss_pred             HHHHHhhccccccccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhccCC---
Confidence            99888874      479999999965433222      222377899999999999888888899999997553221   


Q ss_pred             hhhchhhHHHHHHHHHHHHHH---HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHHHHHhCC
Q 016901          223 AILNLFWGVLLWKRKAEEALI---ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNR  299 (380)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~---~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~  299 (380)
                         .....|+.+|...+.+.+   ..|++++.|.||.+.+++...... .-.+....   -..++++++++++..++..+
T Consensus       152 ---~~~~~YaAaka~l~~la~~~~~~Gi~v~~I~pg~~~~~g~~~~~~-~~~~~~~G---~~~~~~~~~~~~l~~~l~~~  224 (259)
T d2fr1a1         152 ---PGLGGYAPGNAYLDGLAQQRRSDGLPATAVAWGTWAGSGMAEGPV-ADRFRRHG---VIEMPPETACRALQNALDRA  224 (259)
T ss_dssp             ---TTCTTTHHHHHHHHHHHHHHHHTTCCCEEEEECCBC-------------CTTTT---EECBCHHHHHHHHHHHHHTT
T ss_pred             ---cccHHHHHHHHhHHHHHHHHHhCCCCEEECCCCcccCCccccchH-HHHHHhcC---CCCCCHHHHHHHHHHHHhCC
Confidence               123469999999987654   589999999999998764321110 00111111   13589999999999999886


Q ss_pred             C
Q 016901          300 S  300 (380)
Q Consensus       300 ~  300 (380)
                      .
T Consensus       225 ~  225 (259)
T d2fr1a1         225 E  225 (259)
T ss_dssp             C
T ss_pred             C
Confidence            6

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=3.9e-19  Score=163.26  Aligned_cols=205  Identities=13%  Similarity=0.150  Sum_probs=141.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEE---EEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVR---AGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~---~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .|.||||||+++||+++++.|+++|++|+   ...|+.+....+.+..+.+..          ...++..+.+|++|.++
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~----------~~~~~~~~~~Dv~~~~~   71 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALAC----------PPGSLETLQLDVRDSKS   71 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTC----------CTTSEEEEECCTTCHHH
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhc----------cCCceEEEeccccchHh
Confidence            36789999999999999999999997754   445666655555554443321          12689999999999999


Q ss_pred             HHHHh-----cCCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCCCCc
Q 016901          157 IEPAL-----GNASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGFP  221 (380)
Q Consensus       157 ~~~a~-----~~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~~~~  221 (380)
                      +.+++     +.+|++|||||.......      ++...+++|+.|+.++++++    ++.+-+++|++||.......  
T Consensus        72 ~~~~~~~~~~g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~--  149 (285)
T d1jtva_          72 VAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGL--  149 (285)
T ss_dssp             HHHHHHTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCC--
T ss_pred             hhhhhhhccccchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCC--
Confidence            88876     358999999986533222      23344889999988877764    56667899999998653321  


Q ss_pred             hhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccc-ccc-cce-------ee--------ccCCc
Q 016901          222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAY-KET-HNI-------TL--------SQEDT  277 (380)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~-~~~-~~~-------~~--------~~~~~  277 (380)
                          .....|+.+|++.+.+.+       .+|+++++|.||++..+.... ... ...       ..        .....
T Consensus       150 ----~~~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (285)
T d1jtva_         150 ----PFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQV  225 (285)
T ss_dssp             ----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHH
T ss_pred             ----CCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhh
Confidence                233569999999987765       379999999999997763210 000 000       00        00000


Q ss_pred             ccCCCCCHHHHHHHHHHHHhCCC
Q 016901          278 LFGGQVSNLQVAELLACMAKNRS  300 (380)
Q Consensus       278 ~~~~~i~~~DvA~~i~~~l~~~~  300 (380)
                      .......++|+|++++.+++.+.
T Consensus       226 ~~~~~~~PeeVA~~v~~~~~~~~  248 (285)
T d1jtva_         226 FREAAQNPEEVAEVFLTALRAPK  248 (285)
T ss_dssp             HHHHCBCHHHHHHHHHHHHHCSS
T ss_pred             hcccCCCHHHHHHHHHHHHhCCC
Confidence            11135689999999999998765

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.81  E-value=1e-18  Score=157.18  Aligned_cols=165  Identities=16%  Similarity=0.144  Sum_probs=123.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHH---CCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           80 DNLAFVAGATGKVGSRTVRELLK---LGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~---~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ||+||||||+++||+++++.|++   +|++|++..|++++.+++.+..+.              ..++.++.+|++|+++
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~--------------~~~~~~~~~Dvs~~~~   67 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKN--------------HSNIHILEIDLRNFDA   67 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHH--------------CTTEEEEECCTTCGGG
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhc--------------CCcEEEEEEEeccHHH
Confidence            67999999999999999999974   689999999999888776543332              1689999999999988


Q ss_pred             HHHHh---------cCCCEEEEccccCcccc-C------CCCCcchhhHHHHHHHHHHHH----Hc-----------CCC
Q 016901          157 IEPAL---------GNASVVICCIGASEKEV-F------DITGPYRIDFQATKNLVDAAT----IA-----------KVN  205 (380)
Q Consensus       157 ~~~a~---------~~~d~Vi~~Ag~~~~~~-~------~~~~~~~~nv~g~~~ll~a~~----~~-----------~v~  205 (380)
                      +++++         ..+|++|||||...... .      ++...+++|+.|+..+++++.    +.           +..
T Consensus        68 v~~~~~~i~~~~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g  147 (248)
T d1snya_          68 YDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRA  147 (248)
T ss_dssp             HHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTC
T ss_pred             HHHHHhhhHHHhhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhcccccccccccc
Confidence            87654         35899999999643221 1      133347899999888877653    21           346


Q ss_pred             EEEEEccCCCCCCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCC
Q 016901          206 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPT  261 (380)
Q Consensus       206 r~V~~SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~  261 (380)
                      ++|++||........   +......|+.||.+...+.+       ..|++++.|.||++..+.
T Consensus       148 ~ii~i~S~~g~~~~~---~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m  207 (248)
T d1snya_         148 AIINMSSILGSIQGN---TDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDM  207 (248)
T ss_dssp             EEEEECCGGGCSTTC---CSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTT
T ss_pred             ccccccccccccCCC---CCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCc
Confidence            899999975422111   11234579999999887754       378999999999998763

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.80  E-value=9.5e-19  Score=157.62  Aligned_cols=199  Identities=14%  Similarity=0.040  Sum_probs=134.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~--~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ++|+||||||+++||.+++++|+++|+  +|++..|+.++++++.+                ....++.++++|++|.++
T Consensus         2 ~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~----------------~~~~~~~~~~~Dvs~~~~   65 (250)
T d1yo6a1           2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS----------------IKDSRVHVLPLTVTCDKS   65 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT----------------CCCTTEEEEECCTTCHHH
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHH----------------hhCCceEEEEEecCCHHH
Confidence            568999999999999999999999995  68888999988766532                112579999999999988


Q ss_pred             HHHHh-------c--CCCEEEEccccCcc-ccC------CCCCcchhhHHHHHHHHHHHH----Hc-----------CCC
Q 016901          157 IEPAL-------G--NASVVICCIGASEK-EVF------DITGPYRIDFQATKNLVDAAT----IA-----------KVN  205 (380)
Q Consensus       157 ~~~a~-------~--~~d~Vi~~Ag~~~~-~~~------~~~~~~~~nv~g~~~ll~a~~----~~-----------~v~  205 (380)
                      +++++       +  ++|++|||||.... ...      ++...+++|+.|+.++++++.    +.           ...
T Consensus        66 v~~~~~~i~~~~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~  145 (250)
T d1yo6a1          66 LDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRA  145 (250)
T ss_dssp             HHHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTC
T ss_pred             HHHHHHHHHHHhCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceec
Confidence            77665       2  48999999996432 111      123448899999988877653    21           124


Q ss_pred             EEEEEccCCCCCCC-CchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCCc
Q 016901          206 HFIMVSSLGTNKFG-FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDT  277 (380)
Q Consensus       206 r~V~~SS~~~~~~~-~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~  277 (380)
                      +++.+|+....... .......+...|+.||++...+.+       ..|++++.|.||+|-.+...              
T Consensus       146 ~~i~~s~~~~~~~~~~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~--------------  211 (250)
T d1yo6a1         146 AVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGG--------------  211 (250)
T ss_dssp             EEEEECCGGGCSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC--------------------
T ss_pred             cccccccccccccCCcccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCC--------------
Confidence            78888875332111 111122334569999999987764       47899999999999765210              


Q ss_pred             ccCCCCCHHHHHHHHHHHHhCCCC-ccCcEEE
Q 016901          278 LFGGQVSNLQVAELLACMAKNRSL-SYCKVVE  308 (380)
Q Consensus       278 ~~~~~i~~~DvA~~i~~~l~~~~~-~~~~~~n  308 (380)
                       ....+++++.|..++..+..... ..|+.|+
T Consensus       212 -~~~~~~~e~~a~~~~~~~~~~~~~~sG~f~~  242 (250)
T d1yo6a1         212 -KNAALTVEQSTAELISSFNKLDNSHNGRFFM  242 (250)
T ss_dssp             --------HHHHHHHHHHHTTCCGGGTTCEEE
T ss_pred             -CCCCCCHHHHHHHHHHHHhcCCCCCCeEEEC
Confidence             01246788999999988876442 3456654

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=1e-18  Score=159.67  Aligned_cols=191  Identities=17%  Similarity=0.092  Sum_probs=138.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~-G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ++.+|||||+++||.+++++|+++ |++|++..|+.++.++..++++..+             .++.++++|++|.++++
T Consensus         3 ~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~-------------~~~~~~~~Dvs~~~sv~   69 (275)
T d1wmaa1           3 IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG-------------LSPRFHQLDIDDLQSIR   69 (275)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTT-------------CCCEEEECCTTCHHHHH
T ss_pred             CeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcC-------------CcEEEEEEecCCHHHHH
Confidence            345699999999999999999986 8999999999999988888776543             67899999999998887


Q ss_pred             HHh-------cCCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHHHHc--CCCEEEEEccCCCCC---CCC
Q 016901          159 PAL-------GNASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNK---FGF  220 (380)
Q Consensus       159 ~a~-------~~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~~~~--~v~r~V~~SS~~~~~---~~~  220 (380)
                      +++       +.+|++|||||.......      ++...+++|+.|+..+++++...  .-.|+|++||.....   ...
T Consensus        70 ~~~~~~~~~~g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~~~~~~~  149 (275)
T d1wmaa1          70 ALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCS  149 (275)
T ss_dssp             HHHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSC
T ss_pred             HHHHHHHHhcCCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccceeccccccc
Confidence            665       579999999996533221      22234789999999999988542  125899999953310   000


Q ss_pred             c--------------------------------hhhhchhhHHHHHHHHHHHHHH--------H---CCCCEEEEecCcc
Q 016901          221 P--------------------------------AAILNLFWGVLLWKRKAEEALI--------A---SGLPYTIVRPGGM  257 (380)
Q Consensus       221 ~--------------------------------~~~~~~~~~Y~~sK~~~E~~l~--------~---~g~~~~ivRpg~v  257 (380)
                      +                                .....+...|+.||.....+.+        +   .|++++.|.||+|
T Consensus       150 ~y~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v  229 (275)
T d1wmaa1         150 PELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWV  229 (275)
T ss_dssp             HHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSB
T ss_pred             hhhhhhhcccccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccc
Confidence            0                                0011123469999998775532        1   4899999999999


Q ss_pred             cCCCcccccccceeeccCCcccCCCCCHHHHHHHHHHHHhC
Q 016901          258 ERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKN  298 (380)
Q Consensus       258 ~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~  298 (380)
                      ..+....               ....+++|.|+.++.++..
T Consensus       230 ~T~m~~~---------------~~~~~pee~A~~~~~~a~~  255 (275)
T d1wmaa1         230 RTDMAGP---------------KATKSPEEGAETPVYLALL  255 (275)
T ss_dssp             CSTTTCT---------------TCSBCHHHHTHHHHHHHSC
T ss_pred             cCCcccC---------------cccCCHHHHHHHHHHHHcC
Confidence            7653210               1235789999999887643

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=7.3e-18  Score=153.40  Aligned_cols=198  Identities=15%  Similarity=0.113  Sum_probs=142.4

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ++++|++|||||+++||+++++.|+++|++|++++|+.++++++.+++....            ...+..+.+|+++.+.
T Consensus        11 ~L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~------------~~~~~~~~~d~~~~~~   78 (269)
T d1xu9a_          11 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG------------AASAHYIAGTMEDMTF   78 (269)
T ss_dssp             GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT------------CSEEEEEECCTTCHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhh------------cccchhhhhhhhhHHH
Confidence            3588999999999999999999999999999999999999888776554321            1568889999998765


Q ss_pred             HHHHh-------cCCCEEEEccccCccccC------CCCCcchhhHHHHHHHHHHHHH---cCCCEEEEEccCCCCCCCC
Q 016901          157 IEPAL-------GNASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAATI---AKVNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       157 ~~~a~-------~~~d~Vi~~Ag~~~~~~~------~~~~~~~~nv~g~~~ll~a~~~---~~v~r~V~~SS~~~~~~~~  220 (380)
                      +...+       +.+|+++||||.......      ++...+++|+.|+..+.+++..   .+-+++|++||.+....  
T Consensus        79 ~~~~~~~~~~~~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~~~--  156 (269)
T d1xu9a_          79 AEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVA--  156 (269)
T ss_dssp             HHHHHHHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSC--
T ss_pred             HHHHHHHHHHHhCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhcCC--
Confidence            55443       579999999986533222      2233478899998877766531   22368999999765332  


Q ss_pred             chhhhchhhHHHHHHHHHHHHHH---------HCCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHH
Q 016901          221 PAAILNLFWGVLLWKRKAEEALI---------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAEL  291 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~---------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~  291 (380)
                          ......|+.||++.+.+.+         ..|++++.|.||.|.++....      ....  ......++++++|+.
T Consensus       157 ----~p~~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~------~~~~--~~~~~~~~~e~~a~~  224 (269)
T d1xu9a_         157 ----YPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMK------AVSG--IVHMQAAPKEECALE  224 (269)
T ss_dssp             ----CTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHH------HSCG--GGGGGCBCHHHHHHH
T ss_pred             ----CCCchHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHH------hccC--CccccCCCHHHHHHH
Confidence                1234579999999987654         246899999999997652110      0000  111134788999999


Q ss_pred             HHHHHhCCC
Q 016901          292 LACMAKNRS  300 (380)
Q Consensus       292 i~~~l~~~~  300 (380)
                      ++.......
T Consensus       225 i~~~~~~~~  233 (269)
T d1xu9a_         225 IIKGGALRQ  233 (269)
T ss_dssp             HHHHHHTTC
T ss_pred             HHHHhhcCC
Confidence            998876644

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.76  E-value=7.6e-18  Score=152.13  Aligned_cols=216  Identities=13%  Similarity=0.085  Sum_probs=148.5

Q ss_pred             CCCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh
Q 016901           78 KDDNLAFVAGATG--KVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (380)
Q Consensus        78 ~~~~~vlVtGatG--~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~  155 (380)
                      +++|+||||||+|  +||+++++.|+++|++|++..|++...+...+.....              .....+..|+.+..
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~   68 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQL--------------GSDIVLQCDVAEDA   68 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHT--------------TCCCEEECCTTCHH
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhc--------------CCcceeecccchHH
Confidence            4789999999999  8999999999999999999999876554443333221              46778889999877


Q ss_pred             cHHHHh-------cCCCEEEEccccCccccCCC-----------CCcchhhHHHHHHHHHHHHHc--CCCEEEEEccCCC
Q 016901          156 QIEPAL-------GNASVVICCIGASEKEVFDI-----------TGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGT  215 (380)
Q Consensus       156 ~~~~a~-------~~~d~Vi~~Ag~~~~~~~~~-----------~~~~~~nv~g~~~ll~a~~~~--~v~r~V~~SS~~~  215 (380)
                      ++.+.+       ...|.+||||+.......+.           ...+.+|+.+...+.+++...  +-+.+|++||.+.
T Consensus        69 ~~~~~~~~~~~~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~  148 (258)
T d1qsga_          69 SIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGA  148 (258)
T ss_dssp             HHHHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGG
T ss_pred             HHHHHHHHhhhcccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhh
Confidence            666655       45799999998653322211           112455666777777666532  2246888998765


Q ss_pred             CCCCCchhhhchhhHHHHHHHHHHHHHHH-------CCCCEEEEecCcccCCCccccccccee--eccCCcccCCCCCHH
Q 016901          216 NKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNIT--LSQEDTLFGGQVSNL  286 (380)
Q Consensus       216 ~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~g~~~~ivRpg~v~gp~~~~~~~~~~~--~~~~~~~~~~~i~~~  286 (380)
                      ....      .....|+.+|.+.+.+.+.       +|++++.|+||.|.++...........  ........+.+..++
T Consensus       149 ~~~~------~~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pe  222 (258)
T d1qsga_         149 ERAI------PNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIE  222 (258)
T ss_dssp             TSBC------TTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHH
T ss_pred             ccCC------CCcHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchhhhHHHHHHhCCCCCCCcCHH
Confidence            3321      2234699999999988762       789999999999987753221100000  001112234578999


Q ss_pred             HHHHHHHHHHhCC-CCccCcEEEEecCC
Q 016901          287 QVAELLACMAKNR-SLSYCKVVEVIAET  313 (380)
Q Consensus       287 DvA~~i~~~l~~~-~~~~~~~~ni~~~~  313 (380)
                      |+|.++..++.+. ....|+++.+-+|.
T Consensus       223 eia~~v~fL~s~~s~~itG~~i~vDGG~  250 (258)
T d1qsga_         223 DVGNSAAFLCSDLSAGISGEVVHVDGGF  250 (258)
T ss_dssp             HHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHHhCchhcCccCceEEECcCH
Confidence            9999999999654 34578888888774

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.75  E-value=7.9e-18  Score=150.20  Aligned_cols=196  Identities=13%  Similarity=0.117  Sum_probs=136.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ++|+||||||+|+||+++++.|+++|++|++++++.....                       .....+..|..+.+..+
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~   57 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA-----------------------SASVIVKMTDSFTEQAD   57 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS-----------------------SEEEECCCCSCHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-----------------------cccceeecccCcHHHHH
Confidence            3689999999999999999999999999999988764311                       23344556665544333


Q ss_pred             HH-------hc--CCCEEEEccccCcc-ccC------CCCCcchhhHHHHHHHHHHHHHc--CCCEEEEEccCCCCCCCC
Q 016901          159 PA-------LG--NASVVICCIGASEK-EVF------DITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGF  220 (380)
Q Consensus       159 ~a-------~~--~~d~Vi~~Ag~~~~-~~~------~~~~~~~~nv~g~~~ll~a~~~~--~v~r~V~~SS~~~~~~~~  220 (380)
                      .+       ++  ++|++|||||.... ...      ++...+++|+.++.++.+++...  +-.++|++||......  
T Consensus        58 ~~~~~~~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~--  135 (236)
T d1dhra_          58 QVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDG--  135 (236)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC--
T ss_pred             HHHHHHHHHhCCCCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCC--
Confidence            22       22  48999999985321 111      12334789999999888887642  2358999999765332  


Q ss_pred             chhhhchhhHHHHHHHHHHHHHHH---------CCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHH
Q 016901          221 PAAILNLFWGVLLWKRKAEEALIA---------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAEL  291 (380)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~---------~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~  291 (380)
                          ......|+.+|.+.+.+.+.         .|++++.|.||++..|.....      .  ....+..++.++|+|+.
T Consensus       136 ----~~~~~~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~~------~--~~~~~~~~~~pe~va~~  203 (236)
T d1dhra_         136 ----TPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKS------M--PEADFSSWTPLEFLVET  203 (236)
T ss_dssp             ----CTTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHH------S--TTSCGGGSEEHHHHHHH
T ss_pred             ----ccCCcccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcchhh------C--ccchhhcCCCHHHHHHH
Confidence                12345799999999988762         479999999999987642110      0  11123357889999999


Q ss_pred             HHHHHhCCC-CccCcEEEEec
Q 016901          292 LACMAKNRS-LSYCKVVEVIA  311 (380)
Q Consensus       292 i~~~l~~~~-~~~~~~~ni~~  311 (380)
                      +..++.... ...|.++.+..
T Consensus       204 ~~~l~s~~~~~i~G~~i~v~~  224 (236)
T d1dhra_         204 FHDWITGNKRPNSGSLIQVVT  224 (236)
T ss_dssp             HHHHHTTTTCCCTTCEEEEEE
T ss_pred             HHHHhCCCccCCCCCeEEEEE
Confidence            999997654 24677777654

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.74  E-value=2.3e-17  Score=147.00  Aligned_cols=194  Identities=13%  Similarity=0.073  Sum_probs=133.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH-
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP-  159 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~-  159 (380)
                      .+||||||+|+||++++++|+++|++|++++|++....                       .....+.+|+.+.+.... 
T Consensus         3 gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~   59 (235)
T d1ooea_           3 GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA-----------------------DSNILVDGNKNWTEQEQSI   59 (235)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS-----------------------SEEEECCTTSCHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcc-----------------------cccceeccccCchhHHHHH
Confidence            47999999999999999999999999999999865311                       334455677765433222 


Q ss_pred             ------Hh--cCCCEEEEccccCccc-cC------CCCCcchhhHHHHHHHHHHHHHc--CCCEEEEEccCCCCCCCCch
Q 016901          160 ------AL--GNASVVICCIGASEKE-VF------DITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFPA  222 (380)
Q Consensus       160 ------a~--~~~d~Vi~~Ag~~~~~-~~------~~~~~~~~nv~g~~~ll~a~~~~--~v~r~V~~SS~~~~~~~~~~  222 (380)
                            .+  +.+|+||||||..... ..      .++..+++|+.++..+++++...  +-.++|++||.+.....   
T Consensus        60 ~~~~~~~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~---  136 (235)
T d1ooea_          60 LEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPT---  136 (235)
T ss_dssp             HHHHHHHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC---
T ss_pred             HHHHHHHhcCCCeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCc---
Confidence                  22  4589999999954221 11      12234788999998888877643  12589999997653321   


Q ss_pred             hhhchhhHHHHHHHHHHHHHHH---------CCCCEEEEecCcccCCCcccccccceeeccCCcccCCCCCHHHHHHHHH
Q 016901          223 AILNLFWGVLLWKRKAEEALIA---------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA  293 (380)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~~---------~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~  293 (380)
                         .....|+.+|.+.+.+.+.         .+++++.|.||.+..|....      ...  ......++.++|+++.++
T Consensus       137 ---~~~~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~------~~~--~~~~~~~~~~~~va~~~~  205 (235)
T d1ooea_         137 ---PSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRK------WMP--NADHSSWTPLSFISEHLL  205 (235)
T ss_dssp             ---TTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHH------HST--TCCGGGCBCHHHHHHHHH
T ss_pred             ---ccccchHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcchhh------hCc--CCccccCCCHHHHHHHHH
Confidence               2345799999999988762         46789999999997663210      011  112335789999999998


Q ss_pred             HHHhCCC--CccCcEEEEec
Q 016901          294 CMAKNRS--LSYCKVVEVIA  311 (380)
Q Consensus       294 ~~l~~~~--~~~~~~~ni~~  311 (380)
                      ..+..+.  ...|..+.+..
T Consensus       206 ~~l~~~~~~~~tG~~i~v~~  225 (235)
T d1ooea_         206 KWTTETSSRPSSGALLKITT  225 (235)
T ss_dssp             HHHHCGGGCCCTTCEEEEEE
T ss_pred             HHhcCccccCCCceEEEEEe
Confidence            7776543  24577777744

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.73  E-value=3.6e-17  Score=145.90  Aligned_cols=202  Identities=16%  Similarity=0.106  Sum_probs=140.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      |++|||||+++||++++++|+++|++|++.+|+.+.                         .+...+++|+++......+
T Consensus         2 K~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~-------------------------~~~~~~~~d~~~~~~~~~~   56 (241)
T d1uaya_           2 RSALVTGGASGLGRAAALALKARGYRVVVLDLRREG-------------------------EDLIYVEGDVTREEDVRRA   56 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS-------------------------SSSEEEECCTTCHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc-------------------------ccceEeeccccchhhhHHH
Confidence            789999999999999999999999999999998643                         4567789999987665555


Q ss_pred             h------cCCCEEEEccccCcccc----------CCCCCcchhhHHHHHHHHHHHHH----------cCCCEEEEEccCC
Q 016901          161 L------GNASVVICCIGASEKEV----------FDITGPYRIDFQATKNLVDAATI----------AKVNHFIMVSSLG  214 (380)
Q Consensus       161 ~------~~~d~Vi~~Ag~~~~~~----------~~~~~~~~~nv~g~~~ll~a~~~----------~~v~r~V~~SS~~  214 (380)
                      .      ...+.++++++......          ..+...+++|+.+...++..+..          .+..++|++||..
T Consensus        57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~  136 (241)
T d1uaya_          57 VARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVA  136 (241)
T ss_dssp             HHHHHHHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTH
T ss_pred             HHhhhccccccchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchh
Confidence            4      23566666665321111          01223367888888877766532          2345899999976


Q ss_pred             CCCCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccccc-ccceeeccCCcccCCCCCHH
Q 016901          215 TNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE-THNITLSQEDTLFGGQVSNL  286 (380)
Q Consensus       215 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~-~~~~~~~~~~~~~~~~i~~~  286 (380)
                      ....      ......|+.+|.+.+.+.+       .+|++++.|.||++..+...... .............+.+..++
T Consensus       137 ~~~~------~~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~R~g~pe  210 (241)
T d1uaya_         137 AFEG------QIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPRLGRPE  210 (241)
T ss_dssp             HHHC------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHHHHHTTCCSSCSCCCHH
T ss_pred             hccC------CCCchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhhhhHHHHHHhcCCCCCCCcCHH
Confidence            5221      1234579999999998876       37999999999999876321111 00111112222234567899


Q ss_pred             HHHHHHHHHHhCCCCccCcEEEEecCCC
Q 016901          287 QVAELLACMAKNRSLSYCKVVEVIAETT  314 (380)
Q Consensus       287 DvA~~i~~~l~~~~~~~~~~~ni~~~~~  314 (380)
                      |+|+++..++.+. +..|+++.+-+|-.
T Consensus       211 dvA~~v~fL~s~~-~iTG~~i~VDGG~~  237 (241)
T d1uaya_         211 EYAALVLHILENP-MLNGEVVRLDGALR  237 (241)
T ss_dssp             HHHHHHHHHHHCT-TCCSCEEEESTTCC
T ss_pred             HHHHHHHHHHhCC-CCCCCEEEECCccc
Confidence            9999999999864 47899999888754

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.73  E-value=7.9e-17  Score=146.64  Aligned_cols=216  Identities=13%  Similarity=0.125  Sum_probs=139.0

Q ss_pred             CCCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh
Q 016901           78 KDDNLAFVAGATG--KVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (380)
Q Consensus        78 ~~~~~vlVtGatG--~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~  155 (380)
                      +++|++|||||+|  +||.++++.|+++|++|+++.|+++..+.. +.+.+.+             ....++..|+++.+
T Consensus         3 L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~-~~l~~~~-------------~~~~~~~~d~~~~~   68 (274)
T d2pd4a1           3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRV-RPIAQEL-------------NSPYVYELDVSKEE   68 (274)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHH-HHHHHHT-------------TCCCEEECCTTCHH
T ss_pred             CCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHHhhC-------------CceeEeeecccchh
Confidence            5789999999887  899999999999999999999986533333 2232221             45677899999987


Q ss_pred             cHHHHh-------cCCCEEEEccccCccccC--CC--C--Ccch----hhHHHHHHHHHHHHHc-CCC-EEEEEccCCCC
Q 016901          156 QIEPAL-------GNASVVICCIGASEKEVF--DI--T--GPYR----IDFQATKNLVDAATIA-KVN-HFIMVSSLGTN  216 (380)
Q Consensus       156 ~~~~a~-------~~~d~Vi~~Ag~~~~~~~--~~--~--~~~~----~nv~g~~~ll~a~~~~-~v~-r~V~~SS~~~~  216 (380)
                      ++.+++       +.+|++|||+|.......  +.  .  ..+.    ++..+...+....... +.. .++.+|+.+..
T Consensus        69 ~~~~~~~~~~~~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~  148 (274)
T d2pd4a1          69 HFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGST  148 (274)
T ss_dssp             HHHHHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGT
T ss_pred             hHHHHHHHHHHHcCCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeecccccc
Confidence            766665       579999999996532211  11  1  1111    1222233333333222 222 45555555542


Q ss_pred             CCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccc--cceeeccCCcccCCCCCHHH
Q 016901          217 KFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET--HNITLSQEDTLFGGQVSNLQ  287 (380)
Q Consensus       217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~--~~~~~~~~~~~~~~~i~~~D  287 (380)
                      ..      ......|+.+|...+.+.+       .+|++++.|.||.+..+.......  ............+.+..++|
T Consensus       149 ~~------~~~~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~ped  222 (274)
T d2pd4a1         149 KY------MAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEE  222 (274)
T ss_dssp             SB------CTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHH
T ss_pred             cc------cccchhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchHHHHHHHhhhhhccCCcCHHH
Confidence            21      1223469999999998876       389999999999998764322110  00011111223346789999


Q ss_pred             HHHHHHHHHhCC-CCccCcEEEEecCC
Q 016901          288 VAELLACMAKNR-SLSYCKVVEVIAET  313 (380)
Q Consensus       288 vA~~i~~~l~~~-~~~~~~~~ni~~~~  313 (380)
                      +|.++..++.+. ....|+++.+-+|.
T Consensus       223 IA~~v~fL~S~~s~~itG~~i~vDGG~  249 (274)
T d2pd4a1         223 VGNAGMYLLSSLSSGVSGEVHFVDAGY  249 (274)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHhChhhCCCcCceEEECCCh
Confidence            999999999764 33578899888875

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.73  E-value=2.1e-16  Score=144.36  Aligned_cols=228  Identities=13%  Similarity=0.037  Sum_probs=142.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC-chhHHHHHHHHHhhhhcccc----c-ccCCCCCCceEEEEcCCCC
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS-VQRAENLVQSVKQMKLDGEL----A-NKGIQPVEMLELVECDLEK  153 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~-~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~v~~~~~Dl~d  153 (380)
                      +..+|||||+++||++++++|+++|++|++..|+ .+..+++.+.+....-....    + .........+....+|+++
T Consensus         2 ~pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~   81 (284)
T d1e7wa_           2 VPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTL   81 (284)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCC
Confidence            3579999999999999999999999999987764 55566666666543210000    0 0000011223445567888


Q ss_pred             hhcHHHHh-------cCCCEEEEccccCccccC------CCC--------------CcchhhHHHHHHHHHHHHH-----
Q 016901          154 RVQIEPAL-------GNASVVICCIGASEKEVF------DIT--------------GPYRIDFQATKNLVDAATI-----  201 (380)
Q Consensus       154 ~~~~~~a~-------~~~d~Vi~~Ag~~~~~~~------~~~--------------~~~~~nv~g~~~ll~a~~~-----  201 (380)
                      .+++++++       +++|++|||||.......      ++.              ..+.+|+.+...+.+++..     
T Consensus        82 ~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~  161 (284)
T d1e7wa_          82 FTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGT  161 (284)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhh
Confidence            77777665       679999999996532211      111              1256788888888776532     


Q ss_pred             -----cCCCEEEEEccCCCCCCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccc
Q 016901          202 -----AKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHN  269 (380)
Q Consensus       202 -----~~v~r~V~~SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~  269 (380)
                           .+..++|++++.......      .....|+.+|...+.+.+       .+|++++.|.||++.......... .
T Consensus       162 ~~~~~~~~~~ii~~~s~~~~~~~------~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~~~~~~~-~  234 (284)
T d1e7wa_         162 PAKHRGTNYSIINMVDAMTNQPL------LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMPPAV-W  234 (284)
T ss_dssp             CGGGSCSCEEEEEECCTTTTSCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGGGSCHHH-H
T ss_pred             HHHhcCCCCcccccccccccCCc------cceeeeccccccchhhhHHHHHHhCCccccccccccccccccccCCHHH-H
Confidence                 123478888876653321      223579999999998876       379999999999753322111100 0


Q ss_pred             eeeccCCcccCCCCCHHHHHHHHHHHHhCC-CCccCcEEEEecCCC
Q 016901          270 ITLSQEDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAETT  314 (380)
Q Consensus       270 ~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~-~~~~~~~~ni~~~~~  314 (380)
                      -.........+.+..++|+|++++.++.+. .+..|+++.+-+|..
T Consensus       235 ~~~~~~~pl~~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~s  280 (284)
T d1e7wa_         235 EGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS  280 (284)
T ss_dssp             HHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCccCCeEEECcChh
Confidence            011111122345678999999999999754 335788998888754

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.69  E-value=1.9e-15  Score=136.55  Aligned_cols=213  Identities=19%  Similarity=0.161  Sum_probs=134.0

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchh-HHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh----c
Q 016901           82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR-AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV----Q  156 (380)
Q Consensus        82 ~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~----~  156 (380)
                      ++|||||+++||++++++|+++|++|++..|+.++ .+++.+++....            ......+..|+.+..    .
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~   70 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAAR------------AGSAVLCKGDLSLSSSLLDC   70 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS------------TTCEEEEECCCSSSTTHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhc------------CCceEEEecccccchhHHHH
Confidence            68999999999999999999999999999998654 455555554331            146667777775532    2


Q ss_pred             HHH-------HhcCCCEEEEccccCccccCC---------CCCc--------chhhHHHHHHHHHHHHHc---------C
Q 016901          157 IEP-------ALGNASVVICCIGASEKEVFD---------ITGP--------YRIDFQATKNLVDAATIA---------K  203 (380)
Q Consensus       157 ~~~-------a~~~~d~Vi~~Ag~~~~~~~~---------~~~~--------~~~nv~g~~~ll~a~~~~---------~  203 (380)
                      +.+       .++.+|++|||||........         ....        +..|+.+...........         .
T Consensus        71 ~~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (266)
T d1mxha_          71 CEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSR  150 (266)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CC
T ss_pred             HHHHHHHHHHHhCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccc
Confidence            222       336799999999965322110         0111        223444333333333221         1


Q ss_pred             CCEEEEEccCCCCCCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCcccccccceeeccCC
Q 016901          204 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQED  276 (380)
Q Consensus       204 v~r~V~~SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~~~~~~~~~~~~~  276 (380)
                      ...++.+|+......      ......|+.+|...+.+.+       .+|++++.|.||++..+......... .+....
T Consensus       151 ~~~~~~~~~~~~~~~------~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~~~~~~-~~~~~~  223 (266)
T d1mxha_         151 NLSVVNLCDAMTDLP------LPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMPQETQE-EYRRKV  223 (266)
T ss_dssp             CEEEEEECCGGGGSC------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSCHHHHH-HHHTTC
T ss_pred             cccchhhhhcccccc------CcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCCHHHHH-HHHhcC
Confidence            235666666554221      1234579999999998865       37999999999999876432211111 111111


Q ss_pred             cccCCCCCHHHHHHHHHHHHhCCC-CccCcEEEEecCC
Q 016901          277 TLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       277 ~~~~~~i~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      .....+..++|+|.+++.++.+.. +..|+++.+-+|-
T Consensus       224 pl~r~~~~peeva~~v~fL~s~~s~~itG~~i~vDGG~  261 (266)
T d1mxha_         224 PLGQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGL  261 (266)
T ss_dssp             TTTSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CCCCCCCCHHHHHHHHHHHhCchhCCccCCeEEECccH
Confidence            111223689999999999997643 3578899887774

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.67  E-value=1e-15  Score=138.60  Aligned_cols=218  Identities=11%  Similarity=0.045  Sum_probs=136.7

Q ss_pred             CCCCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCCh
Q 016901           77 SKDDNLAFVAGATG--KVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (380)
Q Consensus        77 ~~~~~~vlVtGatG--~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~  154 (380)
                      ++++|++|||||+|  +||++++++|+++|++|++..|+..+..+...  +.             ...+...+++|+++.
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~--~~-------------~~~~~~~~~~dv~~~   67 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRIT--DR-------------LPAKAPLLELDVQNE   67 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHH--TT-------------SSSCCCEEECCTTCH
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHH--HH-------------cCCceeeEeeecccc
Confidence            35889999999654  69999999999999999999998866432111  11             125677899999998


Q ss_pred             hcHHHHh----------cCCCEEEEccccCccccCCCCCc-----------chhhHHHHHHHHHHHHHcC-CCEEEEEcc
Q 016901          155 VQIEPAL----------GNASVVICCIGASEKEVFDITGP-----------YRIDFQATKNLVDAATIAK-VNHFIMVSS  212 (380)
Q Consensus       155 ~~~~~a~----------~~~d~Vi~~Ag~~~~~~~~~~~~-----------~~~nv~g~~~ll~a~~~~~-v~r~V~~SS  212 (380)
                      +++..++          +.+|++|||||............           +.+|+........+..... ...+++++|
T Consensus        68 ~~~~~~~~~v~~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s  147 (268)
T d2h7ma1          68 EHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMD  147 (268)
T ss_dssp             HHHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred             cccccccchhhhccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhccccccccccc
Confidence            6665543          34799999999653322211111           3344444444444443322 223444444


Q ss_pred             CCCCCCCCchhhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccc-c-----c--cc---ce--ee
Q 016901          213 LGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAY-K-----E--TH---NI--TL  272 (380)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~-~-----~--~~---~~--~~  272 (380)
                      .+.... .     .....|+.+|.+.+.+.+       .+|++++.|.||.+.++.... .     .  ..   ..  ..
T Consensus       148 ~~~~~~-~-----p~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (268)
T d2h7ma1         148 FDPSRA-M-----PAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGW  221 (268)
T ss_dssp             CCCSSC-C-----TTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHH
T ss_pred             cccccc-C-----cccchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHH
Confidence            433221 1     223469999999998876       378999999999997652100 0     0  00   00  00


Q ss_pred             ccCCcccCCCCCHHHHHHHHHHHHhCCC-CccCcEEEEecCCCC
Q 016901          273 SQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAETTA  315 (380)
Q Consensus       273 ~~~~~~~~~~i~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~~~  315 (380)
                      ............++|+|+++..++.+.. ...|+++.+-+|...
T Consensus       222 ~~~~pl~rr~~~p~dva~~v~fL~Sd~a~~iTG~~i~vDGG~~~  265 (268)
T d2h7ma1         222 DQRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAHT  265 (268)
T ss_dssp             HHHCTTCCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTGGG
T ss_pred             HhcCCCCCCCCCHHHHHHHHHHHhCchhcCccCCEEEECcCccc
Confidence            0111111236789999999999996532 357888988887644

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.63  E-value=3.9e-15  Score=136.72  Aligned_cols=232  Identities=9%  Similarity=0.023  Sum_probs=137.4

Q ss_pred             CCCCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCC-CCCceEEEEcCC--
Q 016901           77 SKDDNLAFVAGATG--KVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQ-PVEMLELVECDL--  151 (380)
Q Consensus        77 ~~~~~~vlVtGatG--~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl--  151 (380)
                      .+++|++|||||+|  +||++++++|+++|++|++..|++......................+.. ...++..+..++  
T Consensus         5 ~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (297)
T d1d7oa_           5 DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDN   84 (297)
T ss_dssp             CCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCS
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhccc
Confidence            35889999999987  9999999999999999999998765433322211110000000000000 001122222222  


Q ss_pred             ----------------CChhcHH-------HHhcCCCEEEEccccCcccc--------CCCCCcchhhHHHHHHHHHHHH
Q 016901          152 ----------------EKRVQIE-------PALGNASVVICCIGASEKEV--------FDITGPYRIDFQATKNLVDAAT  200 (380)
Q Consensus       152 ----------------~d~~~~~-------~a~~~~d~Vi~~Ag~~~~~~--------~~~~~~~~~nv~g~~~ll~a~~  200 (380)
                                      .+...++       +.++++|++|||||......        .++...+++|+.+...+++++.
T Consensus        85 ~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~  164 (297)
T d1d7oa_          85 PEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFL  164 (297)
T ss_dssp             GGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred             cccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHHH
Confidence                            1222222       23468999999998642211        1233447899999999998876


Q ss_pred             HcCC--CEEEEEccCCCCCCCCchhhhchhhHHHHHHHHHHHHHH--------HCCCCEEEEecCcccCCCcccccc--c
Q 016901          201 IAKV--NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI--------ASGLPYTIVRPGGMERPTDAYKET--H  268 (380)
Q Consensus       201 ~~~v--~r~V~~SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~--------~~g~~~~ivRpg~v~gp~~~~~~~--~  268 (380)
                      ....  ++.+.+++.+......     .....|..+|...+.+.+        .+|++++.|.||++.++.......  .
T Consensus       165 ~~~~~~g~~~~~~~~~~~~~~~-----~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~~~~~  239 (297)
T d1d7oa_         165 PIMNPGGASISLTYIASERIIP-----GYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDT  239 (297)
T ss_dssp             GGEEEEEEEEEEECGGGTSCCT-----TCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHHH
T ss_pred             HHhhcCCcceeeeehhhccccc-----ccccceecccccccccccccchhccccceEEecccccccccchhhhhccCCHH
Confidence            4431  2456666654322211     122359999988876653        368999999999998775321100  0


Q ss_pred             ceeeccCCcccCCCCCHHHHHHHHHHHHhCCC-CccCcEEEEecCC
Q 016901          269 NITLSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET  313 (380)
Q Consensus       269 ~~~~~~~~~~~~~~i~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~~  313 (380)
                      ...........+.+..++|+|.+++.++.+.. +..|+++.+-+|-
T Consensus       240 ~~~~~~~~~PlgR~~~peevA~~v~fL~S~~a~~itGq~i~vDGG~  285 (297)
T d1d7oa_         240 MIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGL  285 (297)
T ss_dssp             HHHHHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHHHhCchhcCCcCceEEECcCH
Confidence            00011111223457899999999999997533 3578888887774

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.61  E-value=1.7e-14  Score=129.55  Aligned_cols=202  Identities=13%  Similarity=0.160  Sum_probs=123.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      ||+||||||+++||++++++|+++|++|++++|+..+                              ...|+.+......
T Consensus         1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~------------------------------~~~d~~~~~~~~~   50 (257)
T d1fjha_           1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE------------------------------VIADLSTAEGRKQ   50 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS------------------------------EECCTTSHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH------------------------------HHHHhcCHHHHHH
Confidence            5789999999999999999999999999999987532                              1356666544333


Q ss_pred             Hh--------cCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHH----HHcCCCEEEEEccCCCCCCCCch-----
Q 016901          160 AL--------GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGFPA-----  222 (380)
Q Consensus       160 a~--------~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~----~~~~v~r~V~~SS~~~~~~~~~~-----  222 (380)
                      ..        +.+|.++||||..... ........+|..+...+.+..    .+........+++..........     
T Consensus        51 ~~~~~~~~~~~~id~lv~~Ag~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (257)
T d1fjha_          51 AIADVLAKCSKGMDGLVLCAGLGPQT-KVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLAL  129 (257)
T ss_dssp             HHHHHHTTCTTCCSEEEECCCCCTTC-SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHH
T ss_pred             HHHHHHHHhCCCCcEEEEcCCCCCcH-HHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhh
Confidence            22        3589999999854321 112223456777766665543    33444456666654221111000     


Q ss_pred             -----------------hhhchhhHHHHHHHHHHHHHH-------HCCCCEEEEecCcccCCCccc--cc-ccceeeccC
Q 016901          223 -----------------AILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAY--KE-THNITLSQE  275 (380)
Q Consensus       223 -----------------~~~~~~~~Y~~sK~~~E~~l~-------~~g~~~~ivRpg~v~gp~~~~--~~-~~~~~~~~~  275 (380)
                                       ........|+.+|.+.+.+.+       .+|++++.|.||++.+|....  .. .....+...
T Consensus       130 ~~~~g~~~~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~  209 (257)
T d1fjha_         130 ALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKF  209 (257)
T ss_dssp             HHHHTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------C
T ss_pred             hccCCcEEEEeeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCHHHHHHHHhc
Confidence                             011223469999999998876       389999999999998764211  10 001111111


Q ss_pred             CcccCCCCCHHHHHHHHHHHHhCCC-CccCcEEEEecC
Q 016901          276 DTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE  312 (380)
Q Consensus       276 ~~~~~~~i~~~DvA~~i~~~l~~~~-~~~~~~~ni~~~  312 (380)
                      ....+.+..++|+|+++..++.+.. +..|+++.+-+|
T Consensus       210 ~~PlgR~g~p~eva~~v~fL~S~~s~~itG~~i~vDGG  247 (257)
T d1fjha_         210 VPPMGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGG  247 (257)
T ss_dssp             CCSTTSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             CCCCCCCcCHHHHHHHHHHHhCchhCCccCceEEeCCC
Confidence            1234457799999999999986543 357888888766

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.59  E-value=2e-14  Score=134.04  Aligned_cols=229  Identities=11%  Similarity=0.127  Sum_probs=139.3

Q ss_pred             CCCeEEEEc--CCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEc-------
Q 016901           79 DDNLAFVAG--ATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVEC-------  149 (380)
Q Consensus        79 ~~~~vlVtG--atG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-------  149 (380)
                      ++|.+||||  ++.+||+++++.|++.|++|++..++............. .+.........+.........+       
T Consensus         1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (329)
T d1uh5a_           1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNG-KFDNDMIIDKDKKMNILDMLPFDASFDTA   79 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTT-TTTGGGEETTTEECCEEEEEECCTTCSSG
T ss_pred             CCcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHH-hhhhHHHHHHHhhhhhhhcccccceehhh
Confidence            357899999  557999999999999999999998877654433322111 0000000000000112223333       


Q ss_pred             -------------CCCChhcHHHH-------hcCCCEEEEccccCcccc--------CCCCCcchhhHHHHHHHHHHHHH
Q 016901          150 -------------DLEKRVQIEPA-------LGNASVVICCIGASEKEV--------FDITGPYRIDFQATKNLVDAATI  201 (380)
Q Consensus       150 -------------Dl~d~~~~~~a-------~~~~d~Vi~~Ag~~~~~~--------~~~~~~~~~nv~g~~~ll~a~~~  201 (380)
                                   |+.+.++++++       ++++|++|||||......        .++...+++|+.++..+++++..
T Consensus        80 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~  159 (329)
T d1uh5a_          80 NDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVN  159 (329)
T ss_dssp             GGCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred             cccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHh
Confidence                         44455444443       468999999998543211        12334478899998888888764


Q ss_pred             c--CCCEEEEEccCCCCCCCCchhhhchhhHHHHHHHHHHHHHH--------HCCCCEEEEecCcccCCCcccc------
Q 016901          202 A--KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI--------ASGLPYTIVRPGGMERPTDAYK------  265 (380)
Q Consensus       202 ~--~v~r~V~~SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~--------~~g~~~~ivRpg~v~gp~~~~~------  265 (380)
                      .  .-+++|.+||.+..... |    .....|+.+|...+.+.+        ++|++++.|.||.|-.+-....      
T Consensus       160 ~m~~~GsIv~iss~~~~~~~-p----~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T~a~~~i~g~~~~  234 (329)
T d1uh5a_         160 IMKPQSSIISLTYHASQKVV-P----GYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNT  234 (329)
T ss_dssp             GEEEEEEEEEEECGGGTSCC-T----TCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCTTGGGCC-----
T ss_pred             hcccccccccceeehhcccc-c----ccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccchhhhcccchhhh
Confidence            3  12489999987653321 1    112358999999997765        2699999999999865210000      


Q ss_pred             ---------------------cc--cc----e------------eeccCCcccCCCCCHHHHHHHHHHHHhCC-CCccCc
Q 016901          266 ---------------------ET--HN----I------------TLSQEDTLFGGQVSNLQVAELLACMAKNR-SLSYCK  305 (380)
Q Consensus       266 ---------------------~~--~~----~------------~~~~~~~~~~~~i~~~DvA~~i~~~l~~~-~~~~~~  305 (380)
                                           ..  ..    .            .........+.+..++|+|.+++.++.+. ....|+
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~~~pedvA~~v~fLaSd~s~~iTGq  314 (329)
T d1uh5a_         235 YENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESRAITGQ  314 (329)
T ss_dssp             -------------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             hhhhhhhhhccccccccccccccccccchhhhhhhcccchHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCchhCCccCC
Confidence                                 00  00    0            00001112345689999999999998763 346789


Q ss_pred             EEEEecCC
Q 016901          306 VVEVIAET  313 (380)
Q Consensus       306 ~~ni~~~~  313 (380)
                      ++.+-+|-
T Consensus       315 ~i~VDGG~  322 (329)
T d1uh5a_         315 TIYVDNGL  322 (329)
T ss_dssp             EEEESTTG
T ss_pred             eEEECCCc
Confidence            99887774

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.40  E-value=4.3e-13  Score=115.02  Aligned_cols=84  Identities=21%  Similarity=0.194  Sum_probs=74.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ..++|+|+||||+|+||+.+++.|+++|++|+++.|+.++.+++.+.+...              .++.+..+|++|.++
T Consensus        20 ~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--------------~~~~~~~~d~~~~~~   85 (191)
T d1luaa1          20 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR--------------FKVNVTAAETADDAS   85 (191)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH--------------HTCCCEEEECCSHHH
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhc--------------cchhhhhhhcccHHH
Confidence            458899999999999999999999999999999999999988877766542              356678899999999


Q ss_pred             HHHHhcCCCEEEEccccC
Q 016901          157 IEPALGNASVVICCIGAS  174 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag~~  174 (380)
                      ++++++++|+||||||..
T Consensus        86 ~~~~~~~iDilin~Ag~g  103 (191)
T d1luaa1          86 RAEAVKGAHFVFTAGAIG  103 (191)
T ss_dssp             HHHHTTTCSEEEECCCTT
T ss_pred             HHHHhcCcCeeeecCccc
Confidence            999999999999999853

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.75  E-value=5e-08  Score=77.48  Aligned_cols=95  Identities=18%  Similarity=0.167  Sum_probs=74.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      |+|+|.|+ |.+|+.+++.|.+.|++|++++++++..+.+.+.                  -++.++.||.+|++.++++
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~------------------~~~~vi~Gd~~~~~~l~~~   61 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE------------------IDALVINGDCTKIKTLEDA   61 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH------------------CSSEEEESCTTSHHHHHHT
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhh------------------hhhhhccCcccchhhhhhc
Confidence            68999996 9999999999999999999999999887765431                  2578899999999999887


Q ss_pred             -hcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEE
Q 016901          161 -LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIM  209 (380)
Q Consensus       161 -~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~  209 (380)
                       ++.+|.++-+...           .+.|+.    +...++..+++++|-
T Consensus        62 ~i~~a~~vv~~t~~-----------d~~N~~----~~~~~k~~~~~~iI~   96 (132)
T d1lssa_          62 GIEDADMYIAVTGK-----------EEVNLM----SSLLAKSYGINKTIA   96 (132)
T ss_dssp             TTTTCSEEEECCSC-----------HHHHHH----HHHHHHHTTCCCEEE
T ss_pred             ChhhhhhhcccCCc-----------HHHHHH----HHHHHHHcCCceEEE
Confidence             5789999986432           134543    333456677776663

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=98.63  E-value=3.6e-07  Score=73.64  Aligned_cols=116  Identities=12%  Similarity=0.119  Sum_probs=79.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G--~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      +.|+|.|.|+ |++|..++..|+.+|  .+|+++++++.+.+.....+.....          ......+..+|.     
T Consensus         4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~----------~~~~~~~~~~d~-----   67 (146)
T d1ez4a1           4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQA----------FTAPKKIYSGEY-----   67 (146)
T ss_dssp             TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGG----------GSCCCEEEECCG-----
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhcccc----------ccCCceEeeccH-----
Confidence            5679999995 999999999999988  5899999998776654444432111          012334455553     


Q ss_pred             HHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEcc
Q 016901          157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS  212 (380)
                        +.+.++|+||.+||.......+..+....|+.-.+.+++.+.+.+.+-++.+-|
T Consensus        68 --~~~~~adivvitag~~~~~g~~r~~l~~~N~~i~~~~~~~i~~~~p~aivivvt  121 (146)
T d1ez4a1          68 --SDCKDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA  121 (146)
T ss_dssp             --GGGTTCSEEEECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             --HHhccccEEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeC
Confidence              246799999999997655445556667889999999999999988776665554

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.47  E-value=1.9e-06  Score=69.54  Aligned_cols=117  Identities=17%  Similarity=0.205  Sum_probs=82.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCCh
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~--~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~  154 (380)
                      +..+++|.|.|| |.+|+.++..|+.+|.  +++++++++++++.....+.....         .....+.+..+|.   
T Consensus         3 ~~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~---------~~~~~~~~~~~d~---   69 (148)
T d1ldna1           3 NNGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKV---------FAPKPVDIWHGDY---   69 (148)
T ss_dssp             TTTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTT---------SSSSCCEEEECCG---
T ss_pred             CCCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCcc---------ccCCCeEEEECCH---
Confidence            345678999996 9999999999999884  799999998876655444433210         0012344444442   


Q ss_pred             hcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEE
Q 016901          155 VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMV  210 (380)
Q Consensus       155 ~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~  210 (380)
                          +.+.++|+||.++|..........+....|..-.+.+++.+.+.+.+.++.+
T Consensus        70 ----~~l~daDvvvitag~~~~~~~~R~dl~~~N~~i~~~i~~~i~~~~p~a~~iv  121 (148)
T d1ldna1          70 ----DDCRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLV  121 (148)
T ss_dssp             ----GGTTTCSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEE
T ss_pred             ----HHhccceeEEEecccccccCcchhHHHHHHHHHHHHHHHHHHhhCCCceEEE
Confidence                4577899999999976554455556678899999999999988876544433

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.46  E-value=9e-07  Score=71.05  Aligned_cols=114  Identities=16%  Similarity=0.105  Sum_probs=80.2

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           82 LAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        82 ~vlVtGatG~iG~~lv~~Ll~~G~--~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      +|.|+||+|.+|++++..|+.+|.  ++++++.++.+...+  .+..           .........   - ....+..+
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~--Dl~~-----------~~~~~~~~~---~-~~~~~~~~   64 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAA--DLSH-----------IETRATVKG---Y-LGPEQLPD   64 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHH--HHTT-----------SSSSCEEEE---E-ESGGGHHH
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhH--HHhh-----------hhhhcCCCe---E-EcCCChHH
Confidence            699999999999999999998883  688888776543321  1110           000011111   1 12456678


Q ss_pred             HhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEcc
Q 016901          160 ALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (380)
Q Consensus       160 a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS  212 (380)
                      +++++|+||.+||.......+..+.++.|+.-.+.+++.+.+++.+-++.+-|
T Consensus        65 ~~~~aDivVitag~~~~~g~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiivvt  117 (144)
T d1mlda1          65 CLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIIS  117 (144)
T ss_dssp             HHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             HhCCCCEEEECCCcCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence            89999999999997655545566678899999999999999998765555554

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.43  E-value=1.6e-06  Score=69.55  Aligned_cols=117  Identities=16%  Similarity=0.094  Sum_probs=77.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCCch--hHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQ--RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G--~~V~~l~R~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      |+|.|+||+|.+|..++..|+.+|  .++.+++++++  +.+.+...+......         ...+++....--.|   
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~---------~~~~~~~~~~~~~d---   68 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAG---------TRSDANIYVESDEN---   68 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTT---------SCCCCEEEEEETTC---
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccc---------cccCCccccCCcch---
Confidence            579999999999999999999998  48899888764  333333333321100         01223322111111   


Q ss_pred             HHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEE
Q 016901          157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMV  210 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~  210 (380)
                       .+.++++|+||-+||.......+..+.++.|..-.+.+++.+.+.+.+.++.+
T Consensus        69 -~~~l~~aDvVVitAG~~~~~g~sR~dl~~~Na~iv~~i~~~i~~~~~~~iivV  121 (145)
T d1hyea1          69 -LRIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEICDTKIFVI  121 (145)
T ss_dssp             -GGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
T ss_pred             -HHHhccceEEEEecccccCCCCChhhhhhhhHHHHHHHHHHHhccCCCeEEEE
Confidence             24677999999999976444334444578899999999999988876655544

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=98.40  E-value=1.1e-06  Score=69.38  Aligned_cols=72  Identities=22%  Similarity=0.277  Sum_probs=61.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      |+++|.| .|.+|+++++.|.++|++|+++..+++..+.+.+                   .....+.+|.++++.++++
T Consensus         1 k~~iIiG-~G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~-------------------~~~~~~~gd~~~~~~l~~a   60 (134)
T d2hmva1           1 KQFAVIG-LGRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS-------------------YATHAVIANATEENELLSL   60 (134)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTT-------------------TCSEEEECCTTCTTHHHHH
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHH-------------------hCCcceeeecccchhhhcc
Confidence            4588888 5999999999999999999999999988776532                   4567888999999999887


Q ss_pred             -hcCCCEEEEccc
Q 016901          161 -LGNASVVICCIG  172 (380)
Q Consensus       161 -~~~~d~Vi~~Ag  172 (380)
                       +.++|.||-+.+
T Consensus        61 ~i~~a~~vi~~~~   73 (134)
T d2hmva1          61 GIRNFEYVIVAIG   73 (134)
T ss_dssp             TGGGCSEEEECCC
T ss_pred             CCccccEEEEEcC
Confidence             788999988765

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.26  E-value=4.9e-06  Score=66.63  Aligned_cols=114  Identities=18%  Similarity=0.160  Sum_probs=75.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHH-CC--CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           81 NLAFVAGATGKVGSRTVRELLK-LG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~-~G--~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      |+|.|+|++|.+|++++..|+. .+  .++.+++..+ ..+...-.+....           .......+    ....++
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~-----------~~~~~~~~----~~~~~~   64 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIP-----------TAVKIKGF----SGEDAT   64 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSC-----------SSCEEEEE----CSSCCH
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCc-----------cccCCcEE----EcCCCc
Confidence            6899999999999999988764 34  6888887754 3333222222110           01122222    112223


Q ss_pred             HHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEc
Q 016901          158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVS  211 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~S  211 (380)
                       ++++++|+||.+||.......+..+.+..|..-.+.+.+.+.+.+.+.+|.+=
T Consensus        65 -~~~~~aDvvvitaG~~~k~g~~R~dl~~~N~~i~~~v~~~i~~~~p~aivivv  117 (145)
T d2cmda1          65 -PALEGADVVLISAGVRRKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGII  117 (145)
T ss_dssp             -HHHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEEC
T ss_pred             -cccCCCCEEEECCCccCCCCcchhhHHHHHHHHHHHHHHHHHhhCCCcEEEEc
Confidence             46889999999999765555566667889999999999999988866544433

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.25  E-value=1.5e-06  Score=71.67  Aligned_cols=75  Identities=20%  Similarity=0.336  Sum_probs=60.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      .|+|+|.|| |++|+++++.|.++|++|++++|+.++...+.+.                 .........+..+.....+
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~-----------------~~~~~~~~~~~~~~~~~~~   63 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAG-----------------VQHSTPISLDVNDDAALDA   63 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTT-----------------CTTEEEEECCTTCHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhc-----------------ccccccccccccchhhhHh
Confidence            478999986 9999999999999999999999999988876531                 1445555667777777888


Q ss_pred             HhcCCCEEEEccc
Q 016901          160 ALGNASVVICCIG  172 (380)
Q Consensus       160 a~~~~d~Vi~~Ag  172 (380)
                      .+...|.++.+..
T Consensus        64 ~i~~~~~~i~~~~   76 (182)
T d1e5qa1          64 EVAKHDLVISLIP   76 (182)
T ss_dssp             HHTTSSEEEECSC
T ss_pred             hhhccceeEeecc
Confidence            8888999987653

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=98.20  E-value=3.9e-06  Score=68.01  Aligned_cols=118  Identities=13%  Similarity=0.065  Sum_probs=80.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHHHHhhh-hcccccccCCCCCCceEEEEcCCCChhc
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMK-LDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      +.++|.|.|+ |.+|+.++..|+..+ .++++++.++++++.....+.... +..          ......     ....
T Consensus         6 k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~----------~~~~~~-----~~~~   69 (154)
T d1pzga1           6 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVD----------TNVSVR-----AEYS   69 (154)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTT----------CCCCEE-----EECS
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccC----------CeeEEe-----ccCc
Confidence            5678999996 999999998888888 489999888877665554443321 000          111111     1233


Q ss_pred             HHHHhcCCCEEEEccccCcccc-----CCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEcc
Q 016901          157 IEPALGNASVVICCIGASEKEV-----FDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag~~~~~~-----~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS  212 (380)
                      .+++++++|+||.++|......     .+....+..|..-.+.+++.+.+.+.+-++.+-|
T Consensus        70 ~~~~~~~adiVvitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~~p~aiviivs  130 (154)
T d1pzga1          70 YEAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVT  130 (154)
T ss_dssp             HHHHHTTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             hhhhhcCCCeEEEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            5678899999999998653221     1334456789999999999999888776665554

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.13  E-value=1.9e-06  Score=71.85  Aligned_cols=47  Identities=23%  Similarity=0.373  Sum_probs=43.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhh
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQM  127 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~  127 (380)
                      |+|.|+||+|.+|++|++.|++.||+|++..|++++.+.+.+++...
T Consensus         1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~   47 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRI   47 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc
Confidence            67999999999999999999999999999999999998888877654

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=98.11  E-value=2e-05  Score=62.68  Aligned_cols=114  Identities=18%  Similarity=0.119  Sum_probs=78.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G--~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      |+|.|.|| |.+|..++..|+.+|  .++.++++++++.+.....+..-. .         .........+|       .
T Consensus         1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~-~---------~~~~~~~~~~~-------~   62 (140)
T d1a5za1           1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGT-P---------FTRRANIYAGD-------Y   62 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHG-G---------GSCCCEEEECC-------G
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccc-c---------ccccccccCCc-------H
Confidence            57999996 999999999999887  589999998877655443332210 0         01334443333       2


Q ss_pred             HHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEcc
Q 016901          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS  212 (380)
                      +.++++|+||.+||..........+.+..|..-.+.+++.+.+.+.+-++.+-|
T Consensus        63 ~~~~~adivvitag~~~~~g~~r~dl~~~N~~I~~~i~~~i~~~~p~aivivvt  116 (140)
T d1a5za1          63 ADLKGSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVT  116 (140)
T ss_dssp             GGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             HHhcCCCEEEEecccccCCCcchhhhhccccchHHHHHHHHHhcCCCcEEEEeC
Confidence            346799999999997654333334456778888899999999888765655544

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=98.11  E-value=4.5e-05  Score=61.78  Aligned_cols=116  Identities=14%  Similarity=0.099  Sum_probs=80.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~--~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ..++|.|.|+ |.+|..++..|+.+|.  ++++++++++........+.......         ........+|      
T Consensus        19 ~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~---------~~~~~~~~~d------   82 (160)
T d1i0za1          19 PNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFL---------QTPKIVADKD------   82 (160)
T ss_dssp             CSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGC---------CCSEEEECSS------
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhcccccc---------CCCeEEeccc------
Confidence            4568999995 9999999999999994  79999998877765554443321110         0122222222      


Q ss_pred             HHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEc
Q 016901          157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVS  211 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~S  211 (380)
                       .+.++++|+||.+||.......+....++.|..-.+.++..+.+.+.+-++.+-
T Consensus        83 -~~~~~~adiVVitAg~~~~~g~tR~~l~~~N~~i~~~i~~~i~~~~p~aiiivv  136 (160)
T d1i0za1          83 -YSVTANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKYSPDCIIIVV  136 (160)
T ss_dssp             -GGGGTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred             -hhhcccccEEEEecCCccccCcchHHHHHHHHHHHHHHHHHHHhcCCCcEEEEe
Confidence             234679999999999765544555566788999999999999988766444433

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=98.10  E-value=2.6e-06  Score=69.11  Aligned_cols=117  Identities=14%  Similarity=0.132  Sum_probs=72.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC----e-E-EEEe---CCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEc
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGF----R-V-RAGV---RSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVEC  149 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~----~-V-~~l~---R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  149 (380)
                      ++++|.|+||+|++|++++..|+..+.    . + +-+.   ++..+.......+....            ......+..
T Consensus         3 ~p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~   70 (154)
T d1y7ta1           3 APVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCA------------FPLLAGLEA   70 (154)
T ss_dssp             CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTT------------CTTEEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccc------------ccccccccc
Confidence            457999999999999999999988752    1 1 1122   22333333322222211            122322222


Q ss_pred             CCCChhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCC-C-EEEEEc
Q 016901          150 DLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKV-N-HFIMVS  211 (380)
Q Consensus       150 Dl~d~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v-~-r~V~~S  211 (380)
                          .....++++++|+||-++|.......+..+.+..|+.-.+.+.+.+.+... . .++.+|
T Consensus        71 ----~~~~~~~~~~advViitaG~~~~pg~~r~dl~~~N~~i~~~~~~~i~k~a~~~~~vivvs  130 (154)
T d1y7ta1          71 ----TDDPKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVG  130 (154)
T ss_dssp             ----ESCHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             ----CCchhhhcccccEEEeecCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEec
Confidence                233467889999999999976544444445577799999999999888542 2 344444

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=98.08  E-value=2.1e-05  Score=62.52  Aligned_cols=111  Identities=9%  Similarity=0.008  Sum_probs=74.1

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCC--chhHHHHHHHHHh-hhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           82 LAFVAGATGKVGSRTVRELLKLGF--RVRAGVRS--VQRAENLVQSVKQ-MKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        82 ~vlVtGatG~iG~~lv~~Ll~~G~--~V~~l~R~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      +|.|+||+|.+|..++..|+.+|.  ++++++.+  ++..+.....+.. ..+           .....+..+|.   + 
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~-----------~~~~~i~~~~~---~-   66 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAY-----------DSNTRVRQGGY---E-   66 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTT-----------TCCCEEEECCG---G-
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccc-----------cCCceEeeCCH---H-
Confidence            699999999999999999999983  67777753  3333322222222 111           13344444442   2 


Q ss_pred             HHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEE
Q 016901          157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMV  210 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~  210 (380)
                         .+.++|+||.+||.......+..+.++.|..-.+.+++.+.+.+.+-++.+
T Consensus        67 ---~~~~aDiVvitaG~~~~~g~~R~dl~~~N~~I~~~i~~~i~~~~p~~i~iv  117 (142)
T d1o6za1          67 ---DTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLT  117 (142)
T ss_dssp             ---GGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEE
T ss_pred             ---HhhhcCEEEEecccccccCCchhhHHHHHHHHHHHHHHHHHhcCCCceEEE
Confidence               357999999999965443334445578899999999999998886644443

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=98.08  E-value=4.6e-05  Score=60.88  Aligned_cols=115  Identities=16%  Similarity=0.103  Sum_probs=76.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G--~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      |+|.|+| +|.+|..++..|+.+|  .+++++++++++.+.....+......         .........+|   .    
T Consensus         2 kKI~IIG-aG~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~---------~~~~~~~~~~d---~----   64 (146)
T d1hyha1           2 RKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMAN---------LEAHGNIVIND---W----   64 (146)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGG---------SSSCCEEEESC---G----
T ss_pred             CeEEEEC-cCHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccc---------cCCccceeccC---H----
Confidence            6899999 5999999999999988  48999999888765544434322100         01223333333   2    


Q ss_pred             HHhcCCCEEEEccccCccc----cCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEcc
Q 016901          159 PALGNASVVICCIGASEKE----VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~~~----~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS  212 (380)
                      +.++++|+||-+||.....    ..+.....+.|..-.+.+.+.+++.+.+-++.+-|
T Consensus        65 ~~l~~adiVVitaG~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~~p~aivivvt  122 (146)
T d1hyha1          65 AALADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVIS  122 (146)
T ss_dssp             GGGTTCSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             HHhccccEEEEeccccccccccCCccHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEec
Confidence            3467999999999954311    11234456789999999999999888665555444

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=98.07  E-value=2.3e-05  Score=62.40  Aligned_cols=115  Identities=16%  Similarity=0.052  Sum_probs=76.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G--~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      |+|.|+|| |.+|+.++..|+..|  .++.++++++.+.......+......         ......+...+  |    .
T Consensus         1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~---------~~~~~~i~~~~--~----~   64 (142)
T d1guza1           1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPV---------GLFDTKVTGSN--D----Y   64 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHH---------HTCCCEEEEES--C----G
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccch---------hcccceEEecC--C----H
Confidence            57999996 999999999999998  58999999887765544333221100         00223333221  1    2


Q ss_pred             HHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEc
Q 016901          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVS  211 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~S  211 (380)
                      +++.++|+||.+||.......+.......|..-.+.+++.+.+.+.+-++.+-
T Consensus        65 ~~~~dadvvvitag~~~~~g~~r~~l~~~N~~i~~~i~~~i~~~~p~aivivv  117 (142)
T d1guza1          65 ADTANSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVV  117 (142)
T ss_dssp             GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEEC
T ss_pred             HHhcCCeEEEEEEecCCCCCCchHHHHHHHHHHHHHHHHHhhccCCCeEEEEe
Confidence            45789999999999654433333444677888888899999888766555443

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=98.05  E-value=1.1e-05  Score=64.36  Aligned_cols=113  Identities=14%  Similarity=0.101  Sum_probs=71.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~--~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ++|.|.|+ |.+|..++..|+.+|.  +++++++++++.+.....+..          ............+|       .
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~----------~~~~~~~~~~~~~~-------~   63 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINH----------GLPFMGQMSLYAGD-------Y   63 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTT----------SCCCTTCEEEC--C-------G
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeecc----------CcccCCCeeEeeCc-------H
Confidence            46889996 9999999999999984  899999988765443332221          11111333333332       2


Q ss_pred             HHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEc
Q 016901          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVS  211 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~S  211 (380)
                      +.+.++|+||.+||.......+....+..|..-.+.+++.+.+.+.+-++.+-
T Consensus        64 ~~~~~adivvitag~~~~~~~~r~~l~~~N~~i~~~i~~~i~~~~p~ai~ivv  116 (142)
T d1y6ja1          64 SDVKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVV  116 (142)
T ss_dssp             GGGTTCSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEEC
T ss_pred             HHhCCCceEEEecccccCcCcchhHHhhHHHHHHHHHHHHhhccCCCceEEEe
Confidence            35778999999999664433344445778898899999999988766544443

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.04  E-value=5.1e-05  Score=61.42  Aligned_cols=116  Identities=16%  Similarity=0.086  Sum_probs=80.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~--~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      +..+|.|.|+ |.+|..++..|+.+|.  ++++++++++++......+.....         ...........|.     
T Consensus        18 ~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~---------~~~~~~~~~~~d~-----   82 (159)
T d2ldxa1          18 SRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSL---------FLSTPKIVFGKDY-----   82 (159)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTT---------TCSCCEEEEESSG-----
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcch---------hcCCCeEEeccch-----
Confidence            4568999995 9999999999999984  799999998876655444433210         0011222222232     


Q ss_pred             HHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEc
Q 016901          157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVS  211 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~S  211 (380)
                        +.++++|+||.+||.......+..+.++.|..-.+.++..+.+.+.+-++.+-
T Consensus        83 --~~~~~adivvitag~~~~~~~~R~dll~~N~~i~~~i~~~i~~~~p~~ivivv  135 (159)
T d2ldxa1          83 --NVSANSKLVIITAGARMVSGQTRLDLLQRNVAIMKAIVPGVIQNSPDCKIIVV  135 (159)
T ss_dssp             --GGGTTEEEEEECCSCCCCTTTCSSCTTHHHHHHHHHHTTTHHHHSTTCEEEEC
T ss_pred             --hhhccccEEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeEEEEe
Confidence              34578999999999765555556666888999999999988888766444433

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=97.99  E-value=5.2e-05  Score=60.29  Aligned_cols=114  Identities=16%  Similarity=0.089  Sum_probs=77.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~--~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      .+|.|.|+ |.+|++++..|+.+|.  +++++++++++.+.....+....          .......+...     +++ 
T Consensus         2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~----------~~~~~~~i~~~-----~~~-   64 (143)
T d1llda1           2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGS----------SFYPTVSIDGS-----DDP-   64 (143)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTG----------GGSTTCEEEEE-----SCG-
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhcc----------ccCCCceeecC-----CCH-
Confidence            36999996 9999999999999984  89999999877655443333210          00122333322     222 


Q ss_pred             HHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEc
Q 016901          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVS  211 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~S  211 (380)
                      +.++++|+||.+||.......+..+.+..|..-.+.+++.+.+.+.+-++.+-
T Consensus        65 ~~~~daDvVVitaG~~~~~g~~R~dl~~~N~~i~~~i~~~i~~~~p~ai~ivv  117 (143)
T d1llda1          65 EICRDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLI  117 (143)
T ss_dssp             GGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEEC
T ss_pred             HHhhCCcEEEEecccccCCCCchhhhhhhhHHHHHHHHHHHHhhCCCeEEEEe
Confidence            34678999999999765443444455778999899999999888866554443

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=97.95  E-value=1.7e-05  Score=65.50  Aligned_cols=117  Identities=11%  Similarity=0.033  Sum_probs=74.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC---C----eEEEEeCCch--hHHHHHHHHHhhhhcccccccCCCCCCceEEEEc
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLG---F----RVRAGVRSVQ--RAENLVQSVKQMKLDGELANKGIQPVEMLELVEC  149 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G---~----~V~~l~R~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  149 (380)
                      +..+|.||||+|.||.+++-.|++.+   .    .+++++.+..  .++.+.-++.....            +.+.-+..
T Consensus        23 ~~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~------------~~~~~~~~   90 (175)
T d7mdha1          23 KLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLY------------PLLREVSI   90 (175)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTC------------TTEEEEEE
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhccccc------------ccccCccc
Confidence            44589999999999999999998753   1    3444554432  23333322222111            11211111


Q ss_pred             CCCChhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCC-C-EEEEEc
Q 016901          150 DLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKV-N-HFIMVS  211 (380)
Q Consensus       150 Dl~d~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v-~-r~V~~S  211 (380)
                          ..+..++++++|+||-++|..........+.+..|..-.+.+.+++.+... . +++.+|
T Consensus        91 ----~~~~~~~~~~aDvVvi~ag~~rkpg~tR~Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv~  150 (175)
T d7mdha1          91 ----GIDPYEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVG  150 (175)
T ss_dssp             ----ESCHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             ----cccchhhccCCceEEEeeccCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEec
Confidence                133568889999999999976555555555678899999999999988643 2 454444

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.94  E-value=5.1e-05  Score=62.98  Aligned_cols=83  Identities=11%  Similarity=0.094  Sum_probs=66.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      ++++|+|.| +|+.|++++..|++.|. ++++..|+.++.+++....++++..           -.......|+.+.+.+
T Consensus        17 ~~k~vlIlG-aGGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~-----------~~~~~~~~~~~~~~~~   84 (182)
T d1vi2a1          17 KGKTMVLLG-AGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNEN-----------TDCVVTVTDLADQQAF   84 (182)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHH-----------SSCEEEEEETTCHHHH
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhh-----------cCcceEeeecccccch
Confidence            678999999 58999999999999985 7889999988777666555544322           2344567888888889


Q ss_pred             HHHhcCCCEEEEcccc
Q 016901          158 EPALGNASVVICCIGA  173 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag~  173 (380)
                      .+.+..+|.|||+...
T Consensus        85 ~~~~~~~diiIN~Tp~  100 (182)
T d1vi2a1          85 AEALASADILTNGTKV  100 (182)
T ss_dssp             HHHHHTCSEEEECSST
T ss_pred             hhhhcccceeccccCC
Confidence            9999999999999753

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.94  E-value=1.3e-05  Score=66.70  Aligned_cols=77  Identities=16%  Similarity=0.073  Sum_probs=53.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      .+.+|||+||+|.+|..+++.....|++|++++|++++.+.+.+    ++             ....+..-|-...+.+.
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~----~G-------------a~~vi~~~~~~~~~~~~   91 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQ----IG-------------FDAAFNYKTVNSLEEAL   91 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TT-------------CSEEEETTSCSCHHHHH
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHh----hh-------------hhhhcccccccHHHHHH
Confidence            56899999999999999999988999999999999887665543    11             12222222222223333


Q ss_pred             HHh--cCCCEEEEccc
Q 016901          159 PAL--GNASVVICCIG  172 (380)
Q Consensus       159 ~a~--~~~d~Vi~~Ag  172 (380)
                      +..  +++|+||++.|
T Consensus        92 ~~~~~~Gvd~v~D~vG  107 (182)
T d1v3va2          92 KKASPDGYDCYFDNVG  107 (182)
T ss_dssp             HHHCTTCEEEEEESSC
T ss_pred             HHhhcCCCceeEEecC
Confidence            333  46999999987

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.94  E-value=9.4e-06  Score=64.75  Aligned_cols=116  Identities=15%  Similarity=0.074  Sum_probs=77.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G--~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      |+|.|.|+ |.+|..++..|+.+|  .++.++++++++.+.....+....-       ..  .....+...     .++ 
T Consensus         1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~-------~~--~~~~~i~~~-----~d~-   64 (142)
T d1ojua1           1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAA-------GI--DKYPKIVGG-----ADY-   64 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHH-------TT--TCCCEEEEE-----SCG-
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhcc-------cc--CCCCccccC-----CCH-
Confidence            68999996 999999999999888  4799999998776554433332110       00  011222221     112 


Q ss_pred             HHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEcc
Q 016901          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS  212 (380)
                      +.+.++|+||-+||.......+..+....|..-.+.+.+.+.+.+.+-++.+-|
T Consensus        65 ~~~~~adiVvitag~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~p~aivivvt  118 (142)
T d1ojua1          65 SLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT  118 (142)
T ss_dssp             GGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred             HHhccccEEEEeccccCCCCCchHHHHHHhhHHHHHHHHHHHhhCCCcEEEEec
Confidence            467899999999986544433444456778888889999999888665555554

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=97.90  E-value=1.6e-05  Score=63.33  Aligned_cols=115  Identities=16%  Similarity=0.129  Sum_probs=73.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHHHHhhh-hcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMK-LDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ++|.|.|+ |.+|..++..|+.++ .++++++.++++.......+.... +..          ....+...     .++ 
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~----------~~~~i~~~-----~d~-   64 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEG----------FDVRVTGT-----NNY-   64 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHT----------CCCCEEEE-----SCG-
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccC----------CCCEEEec-----CcH-
Confidence            57999995 999999999998888 489999988876655444332211 100          11222211     112 


Q ss_pred             HHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEcc
Q 016901          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS  212 (380)
                      +.+.++|+||-+||.......+..+.+..|..-.+.+++...+.+.+-++.+-|
T Consensus        65 ~~~~~advvvitag~~~~~~~~r~dl~~~N~~i~~~i~~~i~k~~p~aivivvt  118 (142)
T d1uxja1          65 ADTANSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVN  118 (142)
T ss_dssp             GGGTTCSEEEECCSCC---------CHHHHHHHHHHHHHHHGGGCTTCEEEECS
T ss_pred             HHhcCCCEEEEeeeccCCcCcchhHHHhHHHHHHHHHHHHHhccCCCceEEEeC
Confidence            245789999999997654444555667889999999999999888665655543

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.83  E-value=2.4e-05  Score=63.20  Aligned_cols=108  Identities=12%  Similarity=0.055  Sum_probs=70.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-------eEEEEeCCch--hHHHHHHHHHhhhhcccccccCCCCCCceEEEEc
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGF-------RVRAGVRSVQ--RAENLVQSVKQMKLDGELANKGIQPVEMLELVEC  149 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~-------~V~~l~R~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  149 (380)
                      +.++|.|+||+|.+|++++..|+..+.       .+++++.+..  +.+.+...+.....            .....+..
T Consensus         2 ~p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~------------~~~~~~~~   69 (154)
T d5mdha1           2 EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCAL------------PLLKDVIA   69 (154)
T ss_dssp             CCEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCC------------TTEEEEEE
T ss_pred             CceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhccccc------------cccccccc
Confidence            457999999999999999999986541       3444444332  22332222221110            11211111


Q ss_pred             CCCChhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHc
Q 016901          150 DLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA  202 (380)
Q Consensus       150 Dl~d~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~  202 (380)
                          .....++++++|+||-++|.......+..+.++.|..-.+.+.+.+.+.
T Consensus        70 ----~~~~~~~~~~~dvVVitag~~~~~g~sr~dll~~N~~i~k~~~~~i~k~  118 (154)
T d5mdha1          70 ----TDKEEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKY  118 (154)
T ss_dssp             ----ESCHHHHTTTCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHH
T ss_pred             ----CcccccccCCceEEEEecccCCCCCCchhHHHHHhHHHHHHHHHHHHhh
Confidence                1234678899999999999776655566677889999999999888765

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.82  E-value=3.6e-05  Score=62.45  Aligned_cols=73  Identities=25%  Similarity=0.362  Sum_probs=57.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .++++|||.|+ |.+|..+++.|...|. +|.+..|+.++...+...+.                  ..+     .+.++
T Consensus        22 l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~------------------~~~-----~~~~~   77 (159)
T d1gpja2          22 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG------------------GEA-----VRFDE   77 (159)
T ss_dssp             CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT------------------CEE-----CCGGG
T ss_pred             cccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhh------------------ccc-----ccchh
Confidence            36789999996 9999999999999997 69999999988877765321                  111     23457


Q ss_pred             HHHHhcCCCEEEEccccC
Q 016901          157 IEPALGNASVVICCIGAS  174 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag~~  174 (380)
                      +.+.+..+|+||++.+..
T Consensus        78 ~~~~l~~~Divi~atss~   95 (159)
T d1gpja2          78 LVDHLARSDVVVSATAAP   95 (159)
T ss_dssp             HHHHHHTCSEEEECCSSS
T ss_pred             HHHHhccCCEEEEecCCC
Confidence            788899999999998743

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.79  E-value=3.7e-05  Score=63.19  Aligned_cols=74  Identities=15%  Similarity=0.209  Sum_probs=52.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc--
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ--  156 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~--  156 (380)
                      .+.+|||+||+|.+|...++.+...|++|+++++++++.+...+    ++             . -++  .|.++.+-  
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~~----~G-------------a-~~v--i~~~~~~~~~   87 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQ----NG-------------A-HEV--FNHREVNYID   87 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TT-------------C-SEE--EETTSTTHHH
T ss_pred             CCCEEEEEeccccccccccccccccCcccccccccccccccccc----cC-------------c-ccc--cccccccHHH
Confidence            56789999999999999999988899999999998876654432    21             1 122  25555432  


Q ss_pred             -HHHHh--cCCCEEEEccc
Q 016901          157 -IEPAL--GNASVVICCIG  172 (380)
Q Consensus       157 -~~~a~--~~~d~Vi~~Ag  172 (380)
                       +.+..  .++|+||++.|
T Consensus        88 ~i~~~t~~~g~d~v~d~~g  106 (174)
T d1yb5a2          88 KIKKYVGEKGIDIIIEMLA  106 (174)
T ss_dssp             HHHHHHCTTCEEEEEESCH
T ss_pred             HhhhhhccCCceEEeeccc
Confidence             23333  35899999986

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.78  E-value=0.00027  Score=56.49  Aligned_cols=115  Identities=12%  Similarity=0.082  Sum_probs=77.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHHHHhhh-hcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMK-LDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      .+|.|.|+ |.+|+.++..|+.++ .++.++++++++.+.....+.... +..          .+..+...|      ..
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~----------~~~~v~~~~------~~   66 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAY----------SNCKVSGSN------TY   66 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHT----------CCCCEEEEC------CG
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccC----------CCcEEEecc------cc
Confidence            47999995 999999998888887 588899998877665554443321 110          122222221      13


Q ss_pred             HHhcCCCEEEEccccCcccc-----CCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEcc
Q 016901          159 PALGNASVVICCIGASEKEV-----FDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~~~~~-----~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS  212 (380)
                      +.++++|+||.++|......     .+....+..|..-.+.+++.+++.+.+-++.+-|
T Consensus        67 ~~~~~advvvitag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~~p~aivivvt  125 (150)
T d1t2da1          67 DDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVT  125 (150)
T ss_dssp             GGGTTCSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             cccCCCcEEEEecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence            45678999999999653221     1233447789999999999999888665555543

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.77  E-value=2.5e-05  Score=64.18  Aligned_cols=74  Identities=19%  Similarity=0.250  Sum_probs=53.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      .+++|+|+||+|.+|...++.+...|.+|+++++++++.+...+    ++               ...+ .|..+.....
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~----lG---------------a~~~-i~~~~~~~~~   86 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLA----LG---------------AEEA-ATYAEVPERA   86 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH----TT---------------CSEE-EEGGGHHHHH
T ss_pred             CCCEEEEEeccccchhhhhhhhcccccccccccccccccccccc----cc---------------ccee-eehhhhhhhh
Confidence            56789999999999999999988899999999999887765543    11               1111 1333322222


Q ss_pred             HHhcCCCEEEEccc
Q 016901          159 PALGNASVVICCIG  172 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag  172 (380)
                      ...+++|+||++.|
T Consensus        87 ~~~~g~D~v~d~~G  100 (171)
T d1iz0a2          87 KAWGGLDLVLEVRG  100 (171)
T ss_dssp             HHTTSEEEEEECSC
T ss_pred             hccccccccccccc
Confidence            33467999999876

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=97.72  E-value=0.00013  Score=58.50  Aligned_cols=75  Identities=11%  Similarity=0.111  Sum_probs=61.3

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH-
Q 016901           82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA-  160 (380)
Q Consensus        82 ~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a-  160 (380)
                      +|+|.| .|-+|..+++.|.++|++|+++..++++.....+....               .++.++.||.+|++.++++ 
T Consensus         5 HiII~G-~g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~---------------~~~~vi~Gd~~d~~~L~~a~   68 (153)
T d1id1a_           5 HFIVCG-HSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG---------------DNADVIPGDSNDSSVLKKAG   68 (153)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC---------------TTCEEEESCTTSHHHHHHHT
T ss_pred             EEEEEC-CCHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhc---------------CCcEEEEccCcchHHHHHhc
Confidence            699999 58999999999999999999999998765444333221               5789999999999988876 


Q ss_pred             hcCCCEEEEccc
Q 016901          161 LGNASVVICCIG  172 (380)
Q Consensus       161 ~~~~d~Vi~~Ag  172 (380)
                      ++.+|+||-+..
T Consensus        69 i~~a~~vi~~~~   80 (153)
T d1id1a_          69 IDRCRAILALSD   80 (153)
T ss_dssp             TTTCSEEEECSS
T ss_pred             cccCCEEEEccc
Confidence            478999998864

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.69  E-value=8.7e-05  Score=60.75  Aligned_cols=73  Identities=18%  Similarity=0.217  Sum_probs=54.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ++++|+|.| +|+.+++++..|.+.|.+|+++.|+.++.+.+.+.+...              ..+..  .++.+.+   
T Consensus        17 ~~k~vlIlG-aGGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~--------------~~~~~--~~~~~~~---   76 (170)
T d1nyta1          17 PGLRILLIG-AGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHT--------------GSIQA--LSMDELE---   76 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGG--------------SSEEE--CCSGGGT---
T ss_pred             CCCEEEEEC-CcHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhc--------------ccccc--ccccccc---
Confidence            678999999 699999999999999999999999999988877654432              22322  2222211   


Q ss_pred             HHhcCCCEEEEcccc
Q 016901          159 PALGNASVVICCIGA  173 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~  173 (380)
                        ...+|.|||+...
T Consensus        77 --~~~~dliIN~Tp~   89 (170)
T d1nyta1          77 --GHEFDLIINATSS   89 (170)
T ss_dssp             --TCCCSEEEECCSC
T ss_pred             --ccccceeeccccc
Confidence              2468999999753

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.65  E-value=4.2e-05  Score=53.89  Aligned_cols=43  Identities=40%  Similarity=0.448  Sum_probs=38.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLV  121 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~  121 (380)
                      .+++|||+||+|.+|...++.+...|++|++.++++++.+.+.
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~~   73 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLK   73 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHHH
Confidence            4578999999999999999988889999999999998876654

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.64  E-value=0.00027  Score=57.45  Aligned_cols=98  Identities=18%  Similarity=0.204  Sum_probs=63.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCC--Chhc
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLE--KRVQ  156 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~--d~~~  156 (380)
                      .+.+|+|+| +|.+|...+..+...|.+|+++++++++.+...+    ++             .... +..|-.  +...
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~----~g-------------a~~~-~~~~~~~~~~~~   86 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN----CG-------------ADVT-LVVDPAKEEESS   86 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----TT-------------CSEE-EECCTTTSCHHH
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHH----cC-------------CcEE-Eeccccccccch
Confidence            456899997 7999999999888899999999999988765443    11             2222 222322  2233


Q ss_pred             HHHHh-----cCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEcc
Q 016901          157 IEPAL-----GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (380)
Q Consensus       157 ~~~a~-----~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS  212 (380)
                      +.+.+     .++|+||.++|..               ......++.++..  .++++++.
T Consensus        87 ~~~~~~~~~g~g~D~vid~~g~~---------------~~~~~a~~~~~~~--G~iv~~G~  130 (170)
T d1e3ja2          87 IIERIRSAIGDLPNVTIDCSGNE---------------KCITIGINITRTG--GTLMLVGM  130 (170)
T ss_dssp             HHHHHHHHSSSCCSEEEECSCCH---------------HHHHHHHHHSCTT--CEEEECSC
T ss_pred             hhhhhhcccccCCceeeecCCCh---------------HHHHHHHHHHhcC--CceEEEec
Confidence            33333     4699999999742               1223344555544  47888774

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.63  E-value=4.9e-05  Score=62.83  Aligned_cols=99  Identities=21%  Similarity=0.204  Sum_probs=64.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCCh---h
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR---V  155 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~---~  155 (380)
                      .+.+|||+||+|.+|..+++.+...|.+|+++++++++.+.+.+    +               +...+ .|..+.   +
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~~----~---------------Ga~~v-i~~~~~~~~~   84 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSR----L---------------GVEYV-GDSRSVDFAD   84 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHT----T---------------CCSEE-EETTCSTHHH
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeeccccccccccc----c---------------ccccc-ccCCccCHHH
Confidence            46799999999999999999888889999999998877654432    1               12211 233443   3


Q ss_pred             cHHHHh--cCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCC
Q 016901          156 QIEPAL--GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT  215 (380)
Q Consensus       156 ~~~~a~--~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~  215 (380)
                      .+.+..  .++|+||++.|..                .....++.++..  .++|.++..+.
T Consensus        85 ~v~~~t~~~g~d~v~d~~g~~----------------~~~~~~~~l~~~--G~~v~~G~~~~  128 (183)
T d1pqwa_          85 EILELTDGYGVDVVLNSLAGE----------------AIQRGVQILAPG--GRFIELGKKDV  128 (183)
T ss_dssp             HHHHHTTTCCEEEEEECCCTH----------------HHHHHHHTEEEE--EEEEECSCGGG
T ss_pred             HHHHHhCCCCEEEEEecccch----------------HHHHHHHHhcCC--CEEEEEccCCC
Confidence            333333  4699999998731                122344444433  47888765443

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.62  E-value=0.0001  Score=62.14  Aligned_cols=79  Identities=22%  Similarity=0.237  Sum_probs=53.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCC--Cce-E-----EEEcCCC
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPV--EML-E-----LVECDLE  152 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v-~-----~~~~Dl~  152 (380)
                      |+|.|.| .|++|..++..|+++|++|++++.+.++.+.+.+              +..+.  +.. +     .....+.
T Consensus         1 MkI~ViG-lG~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln~--------------g~~p~~e~~~~~~l~~~~~~~~~~   65 (202)
T d1mv8a2           1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQ--------------GKSPIVEPGLEALLQQGRQTGRLS   65 (202)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHT--------------TCCSSCCTTHHHHHHHHHHTTCEE
T ss_pred             CEEEEEC-CCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhcc--------------cCCcccchhhhhhhhhhhcccccc
Confidence            6799997 9999999999999999999999999877665532              00000  000 0     0000111


Q ss_pred             ChhcHHHHhcCCCEEEEccccC
Q 016901          153 KRVQIEPALGNASVVICCIGAS  174 (380)
Q Consensus       153 d~~~~~~a~~~~d~Vi~~Ag~~  174 (380)
                      -..++.+++.++|++|.|.+..
T Consensus        66 ~~~~~~~~i~~~d~i~i~VpTP   87 (202)
T d1mv8a2          66 GTTDFKKAVLDSDVSFICVGTP   87 (202)
T ss_dssp             EESCHHHHHHTCSEEEECCCCC
T ss_pred             cCCCHHHHHhhCCEEEEecCcc
Confidence            1345677888999999998754

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.57  E-value=0.00017  Score=58.47  Aligned_cols=40  Identities=23%  Similarity=0.228  Sum_probs=35.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLV  121 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~  121 (380)
                      |+|.|.| .|.+|..+++.|.++|++|++.+|+++..+...
T Consensus         1 MkI~iIG-~G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~   40 (165)
T d2f1ka2           1 MKIGVVG-LGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAV   40 (165)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHCCCEEEEEECCchHHHHHH
Confidence            5799998 699999999999999999999999987766543

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.57  E-value=6.9e-05  Score=61.68  Aligned_cols=75  Identities=17%  Similarity=0.237  Sum_probs=54.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh---
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV---  155 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~---  155 (380)
                      .+.+|+|+||+|.+|..+++.+...|.+|++.++++++.+.+.+    ++             . -++  .|.++.+   
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~----lG-------------a-~~v--i~~~~~d~~~   87 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK----AG-------------A-WQV--INYREEDLVE   87 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH----HT-------------C-SEE--EETTTSCHHH
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHh----cC-------------C-eEE--EECCCCCHHH
Confidence            46799999999999999999888899999999999988766543    21             1 122  2555533   


Q ss_pred             cHHHHh--cCCCEEEEcccc
Q 016901          156 QIEPAL--GNASVVICCIGA  173 (380)
Q Consensus       156 ~~~~a~--~~~d~Vi~~Ag~  173 (380)
                      .+.++-  .++|+|+.+.|.
T Consensus        88 ~v~~~t~g~g~d~v~d~~g~  107 (179)
T d1qora2          88 RLKEITGGKKVRVVYDSVGR  107 (179)
T ss_dssp             HHHHHTTTCCEEEEEECSCG
T ss_pred             HHHHHhCCCCeEEEEeCccH
Confidence            333333  358999999873

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.56  E-value=0.00017  Score=61.61  Aligned_cols=178  Identities=11%  Similarity=0.055  Sum_probs=96.1

Q ss_pred             CCCCeEEEEc----------------CCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCC
Q 016901           78 KDDNLAFVAG----------------ATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPV  141 (380)
Q Consensus        78 ~~~~~vlVtG----------------atG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (380)
                      +.+++||||+                +||..|.+|++++..+|++|+++.-..+.                      ...
T Consensus         4 l~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~----------------------~~p   61 (223)
T d1u7za_           4 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL----------------------PTP   61 (223)
T ss_dssp             TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC----------------------CCC
T ss_pred             cCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhccccc----------------------Ccc
Confidence            4567777775                48999999999999999999998764321                      112


Q ss_pred             CceEEEEcCCCC--hhcHHHHhcCCCEEEEccccCccccCCCCC-----------cchhhHHHHHHHHHHHHHcCCCEEE
Q 016901          142 EMLELVECDLEK--RVQIEPALGNASVVICCIGASEKEVFDITG-----------PYRIDFQATKNLVDAATIAKVNHFI  208 (380)
Q Consensus       142 ~~v~~~~~Dl~d--~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~-----------~~~~nv~g~~~ll~a~~~~~v~r~V  208 (380)
                      ..+..+...-.+  .+.+.+.+.++|++|++|+..++.......           .+.+++.-+..++..+.+...++.+
T Consensus        62 ~~~~~~~~~t~~~m~~~~~~~~~~~D~~i~aAAvsDf~~~~~~~~k~Kk~~~~~~~l~L~L~~tpdIL~~l~~~k~~~~~  141 (223)
T d1u7za_          62 PFVKRVDVMTALEMEAAVNASVQQQNIFIGCAAVADYRAATVAPEKIKKQATQGDELTIKMVKNPDIVAGVAALKDHRPY  141 (223)
T ss_dssp             TTEEEEECCSHHHHHHHHHHHGGGCSEEEECCBCCSEEESSCCSSCC-------CEEEEEEEECCCHHHHHHHCSSSCCE
T ss_pred             cccccceehhhHHHHHHHHhhhccceeEeeeechhhhhhhhhhhhhcccccccccccceeeecCHHHHHHHHhhccCCce
Confidence            455555443211  133445557899999999976543321111           1122333344566666554433323


Q ss_pred             EEccCCCCCCCCchhhhchhhHHHHHHHHHHHHHHHCCCCEEEEecCc----ccCCCcccccccceeeccCCcccCCCCC
Q 016901          209 MVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGG----MERPTDAYKETHNITLSQEDTLFGGQVS  284 (380)
Q Consensus       209 ~~SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~g~~~~ivRpg~----v~gp~~~~~~~~~~~~~~~~~~~~~~i~  284 (380)
                      .++-..-  .       +....+     +.++ +...|+++++...-.    .+|...    .....+...........+
T Consensus       142 ~VGFaaE--t-------~~l~~~-----A~~K-l~~K~~D~IvAN~v~~~~~~fgsd~----n~v~ii~~~~~~~~~~~s  202 (223)
T d1u7za_         142 VVGFAAE--T-------NNVEEY-----ARQK-RIRKNLDLICANDVSQPTQGFNSDN----NALHLFWQDGDKVLPLER  202 (223)
T ss_dssp             EEEEEEE--S-------SSHHHH-----HHHH-HHHHTCSEEEEEECSSTTSSTTSSE----EEEEEEETTEEEEEEEEE
T ss_pred             EEEEeec--c-------cchhhH-----HHHH-HHhcCCCEEEeecccCCCCCcCCCc----eEEEEEECCCeEEcCCCC
Confidence            3332211  0       111112     2222 456889988877522    233221    122223322222223467


Q ss_pred             HHHHHHHHHHHH
Q 016901          285 NLQVAELLACMA  296 (380)
Q Consensus       285 ~~DvA~~i~~~l  296 (380)
                      -.++|+.++..+
T Consensus       203 K~~iA~~Il~~I  214 (223)
T d1u7za_         203 KELLGQLLLDEI  214 (223)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            788999888654

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.55  E-value=6.4e-05  Score=59.96  Aligned_cols=36  Identities=19%  Similarity=0.036  Sum_probs=29.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCC----CeEEEEeCCch
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLG----FRVRAGVRSVQ  115 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G----~~V~~l~R~~~  115 (380)
                      |++|.|.||||++|+.+++.|+++.    .+++++.++..
T Consensus         1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s   40 (146)
T d1t4ba1           1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQL   40 (146)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSST
T ss_pred             CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccc
Confidence            4689999999999999999988864    36777776543

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.54  E-value=6.6e-05  Score=61.94  Aligned_cols=44  Identities=34%  Similarity=0.438  Sum_probs=38.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQ  122 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~  122 (380)
                      .+.+|||+||+|.+|...++.+...|.+|++.++++++.+...+
T Consensus        31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~   74 (176)
T d1xa0a2          31 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV   74 (176)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH
T ss_pred             CCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHh
Confidence            45789999999999999999888899999999999888766543

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.53  E-value=0.00011  Score=60.41  Aligned_cols=80  Identities=19%  Similarity=0.018  Sum_probs=54.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      |+|.|.| +|.+|..++..|.++|++|++++|++++.+...+.    +....       ..+.............++.++
T Consensus         2 k~iaIiG-aG~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~-------~~~~~~~~~~~~~~~~~~~e~   69 (184)
T d1bg6a2           2 KTYAVLG-LGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDR----GAIIA-------EGPGLAGTAHPDLLTSDIGLA   69 (184)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH----TSEEE-------ESSSCCEEECCSEEESCHHHH
T ss_pred             CEEEEEC-ccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHc----CCCch-------hhhhhhhhhhhhhhhhhhHhH
Confidence            6899999 59999999999999999999999998877665431    10000       001122222222222457788


Q ss_pred             hcCCCEEEEccc
Q 016901          161 LGNASVVICCIG  172 (380)
Q Consensus       161 ~~~~d~Vi~~Ag  172 (380)
                      ++++|+||.+..
T Consensus        70 ~~~aD~iii~v~   81 (184)
T d1bg6a2          70 VKDADVILIVVP   81 (184)
T ss_dssp             HTTCSEEEECSC
T ss_pred             hcCCCEEEEEEc
Confidence            999999999863

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.43  E-value=4.6e-05  Score=62.38  Aligned_cols=43  Identities=37%  Similarity=0.443  Sum_probs=37.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQ  122 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~  122 (380)
                      +.+|||+||+|.+|.+.++.....|++|++.++++++.+.+.+
T Consensus        24 ~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~   66 (167)
T d1tt7a2          24 KGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQ   66 (167)
T ss_dssp             GCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHH
T ss_pred             CCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHh
Confidence            4579999999999999998888889999999999988776644

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=97.38  E-value=0.00013  Score=59.04  Aligned_cols=35  Identities=29%  Similarity=0.293  Sum_probs=32.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchh
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR  116 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~  116 (380)
                      |+|+|.|+ |.+|..++..|.+.|++|.+++|++.+
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~   35 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQP   35 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCS
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHH
Confidence            68999996 999999999999999999999998754

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.35  E-value=0.0031  Score=47.34  Aligned_cols=95  Identities=23%  Similarity=0.302  Sum_probs=66.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      ..+++|+|.| +|.+|..-++.|++.|.+|++++........  ...+               ..+++++..++.+.   
T Consensus        10 l~~k~vlVvG-~G~va~~ka~~ll~~ga~v~v~~~~~~~~~~--~~~~---------------~~~i~~~~~~~~~~---   68 (113)
T d1pjqa1          10 LRDRDCLIVG-GGDVAERKARLLLEAGARLTVNALTFIPQFT--VWAN---------------EGMLTLVEGPFDET---   68 (113)
T ss_dssp             CBTCEEEEEC-CSHHHHHHHHHHHHTTBEEEEEESSCCHHHH--HHHT---------------TTSCEEEESSCCGG---
T ss_pred             eCCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEeccCChHHH--HHHh---------------cCCceeeccCCCHH---
Confidence            4678999999 8999999999999999999998876643221  1111               15678877776542   


Q ss_pred             HHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEcc
Q 016901          158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS  212 (380)
                        -+.+++.|+.+.+..           .    -...+.+.|++.++  +|++..
T Consensus        69 --dl~~~~lv~~at~d~-----------~----~n~~i~~~a~~~~i--lVNv~D  104 (113)
T d1pjqa1          69 --LLDSCWLAIAATDDD-----------T----VNQRVSDAAESRRI--FCNVVD  104 (113)
T ss_dssp             --GGTTCSEEEECCSCH-----------H----HHHHHHHHHHHTTC--EEEETT
T ss_pred             --HhCCCcEEeecCCCH-----------H----HHHHHHHHHHHcCC--EEEeCC
Confidence              256788888765421           1    23457788888875  777654

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.34  E-value=0.00023  Score=57.94  Aligned_cols=75  Identities=15%  Similarity=0.150  Sum_probs=52.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCC-ChhcH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLE-KRVQI  157 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~-d~~~~  157 (380)
                      .+.+|+|.|+ |.+|...++.+...|.+|+++++++++.+...+    ++             .. +++  |.. +.+..
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~----lG-------------a~-~~i--~~~~~~~~~   85 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMK----MG-------------AD-HYI--ATLEEGDWG   85 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH----HT-------------CS-EEE--EGGGTSCHH
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhhc----cC-------------Cc-EEe--eccchHHHH
Confidence            5678999996 999999998887889999999999888765433    21             11 122  222 22333


Q ss_pred             HHHhcCCCEEEEccccC
Q 016901          158 EPALGNASVVICCIGAS  174 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag~~  174 (380)
                      ++..+++|.||.+.+..
T Consensus        86 ~~~~~~~d~vi~~~~~~  102 (168)
T d1piwa2          86 EKYFDTFDLIVVCASSL  102 (168)
T ss_dssp             HHSCSCEEEEEECCSCS
T ss_pred             HhhhcccceEEEEecCC
Confidence            44456799999998753

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.34  E-value=0.00022  Score=59.49  Aligned_cols=120  Identities=13%  Similarity=0.110  Sum_probs=70.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCC-----CceEEEEcCCCC
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPV-----EMLELVECDLEK  153 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~v~~~~~Dl~d  153 (380)
                      +-++|.|.|| |.+|+.++..++.+|++|++++++++.++...+.+++.-. .... .+....     ....-...-+.-
T Consensus         3 ~IkkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~~~l~-~~~~-~~~~~~~~~~~~~~~~~l~~i~~   79 (192)
T d1f0ya2           3 IVKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLR-KVAK-KKFAENPKAGDEFVEKTLSTIAT   79 (192)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHH-HHHH-TTSSSCHHHHHHHHHHHHHTEEE
T ss_pred             eeEEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHHHHHH-HHHH-hhhhccchhhHHHHHHHHhhccc
Confidence            4579999995 9999999999999999999999999876665555443210 0000 000000     000000011112


Q ss_pred             hhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCC
Q 016901          154 RVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT  215 (380)
Q Consensus       154 ~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~  215 (380)
                      ..++.+++.++|.||-++.-              |+.-=+.++....+.-....|+.|+.+.
T Consensus        80 ~~d~~~a~~~ad~ViEav~E--------------~l~~K~~v~~~l~~~~~~~~ilasnTS~  127 (192)
T d1f0ya2          80 STDAASVVHSTDLVVEAIVE--------------NLKVKNELFKRLDKFAAEHTIFASNTSS  127 (192)
T ss_dssp             ESCHHHHTTSCSEEEECCCS--------------CHHHHHHHHHHHTTTSCTTCEEEECCSS
T ss_pred             cchhHhhhcccceehhhccc--------------chhHHHHHHHHHhhhcccCceeeccCcc
Confidence            34567888999999998631              3333445665555443344555665443

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.32  E-value=0.00058  Score=55.73  Aligned_cols=74  Identities=16%  Similarity=0.234  Sum_probs=55.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      .+++|+|.| +|+.++.++..|.+.+.+|+++.|+.++.+.+.+.+...              .++..+..|-.      
T Consensus        17 ~~k~vlIlG-aGGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~--------------~~~~~~~~~~~------   75 (171)
T d1p77a1          17 PNQHVLILG-AGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPY--------------GNIQAVSMDSI------   75 (171)
T ss_dssp             TTCEEEEEC-CSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGG--------------SCEEEEEGGGC------
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhc--------------cccchhhhccc------
Confidence            678999999 788999999999998889999999999988887765432              23444443311      


Q ss_pred             HHhcCCCEEEEccccC
Q 016901          159 PALGNASVVICCIGAS  174 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~  174 (380)
                       .+..+|.|||+....
T Consensus        76 -~~~~~diiIN~tp~g   90 (171)
T d1p77a1          76 -PLQTYDLVINATSAG   90 (171)
T ss_dssp             -CCSCCSEEEECCCC-
T ss_pred             -cccccceeeeccccc
Confidence             246799999997643

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.29  E-value=0.00032  Score=56.67  Aligned_cols=65  Identities=17%  Similarity=0.232  Sum_probs=52.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      |+|-|.| .|.+|+.+++.|+++|++|++.+|++++.+.+.+                   .....       ..+..++
T Consensus         1 MkIgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~-------------------~~~~~-------~~~~~e~   53 (161)
T d1vpda2           1 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIA-------------------AGAET-------ASTAKAI   53 (161)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-------------------TTCEE-------CSSHHHH
T ss_pred             CEEEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHH-------------------hhhhh-------cccHHHH
Confidence            5799998 8999999999999999999999999988777654                   22221       2445677


Q ss_pred             hcCCCEEEEccc
Q 016901          161 LGNASVVICCIG  172 (380)
Q Consensus       161 ~~~~d~Vi~~Ag  172 (380)
                      ++++|+||-|..
T Consensus        54 ~~~~d~ii~~v~   65 (161)
T d1vpda2          54 AEQCDVIITMLP   65 (161)
T ss_dssp             HHHCSEEEECCS
T ss_pred             HhCCCeEEEEcC
Confidence            889999999874

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.29  E-value=0.00013  Score=60.16  Aligned_cols=42  Identities=40%  Similarity=0.452  Sum_probs=37.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLV  121 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~  121 (380)
                      +.+|||+||+|.+|...++.....|++|++++|++++.+.+.
T Consensus        32 ~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~   73 (177)
T d1o89a2          32 DGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLK   73 (177)
T ss_dssp             GCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH
T ss_pred             CCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHH
Confidence            358999999999999999988889999999999998876554

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.27  E-value=0.00036  Score=56.70  Aligned_cols=74  Identities=16%  Similarity=0.175  Sum_probs=54.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      .+.+|+|.|+ |.||...++.+...|+++++++++.++.+...+    ++             .. .+  .|..+.+...
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~~----lG-------------ad-~~--i~~~~~~~~~   88 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA----LG-------------AD-EV--VNSRNADEMA   88 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----HT-------------CS-EE--EETTCHHHHH
T ss_pred             CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHHHhc----cC-------------Cc-EE--EECchhhHHH
Confidence            5679999985 999999998888899999999998887654332    21             11 12  3555666555


Q ss_pred             HHhcCCCEEEEcccc
Q 016901          159 PALGNASVVICCIGA  173 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~  173 (380)
                      ...+++|++|.+.|.
T Consensus        89 ~~~~~~D~vid~~g~  103 (168)
T d1uufa2          89 AHLKSFDFILNTVAA  103 (168)
T ss_dssp             TTTTCEEEEEECCSS
T ss_pred             HhcCCCceeeeeeec
Confidence            566789999999874

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.26  E-value=0.0022  Score=51.85  Aligned_cols=76  Identities=22%  Similarity=0.251  Sum_probs=52.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      .+.+|+|.|+ |.+|...+..+...|. +|++.++++.+.+...+    ++             . -.++..+-.+....
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~----~G-------------a-~~~~~~~~~~~~~~   86 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKE----IG-------------A-DLVLQISKESPQEI   86 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TT-------------C-SEEEECSSCCHHHH
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHHH----hC-------------C-cccccccccccccc
Confidence            4568999985 9999999999988997 79999999887765432    11             1 12233333344434


Q ss_pred             HHHh-----cCCCEEEEcccc
Q 016901          158 EPAL-----GNASVVICCIGA  173 (380)
Q Consensus       158 ~~a~-----~~~d~Vi~~Ag~  173 (380)
                      .+.+     .++|+||.+.|.
T Consensus        87 ~~~~~~~~g~g~Dvvid~~G~  107 (171)
T d1pl8a2          87 ARKVEGQLGCKPEVTIECTGA  107 (171)
T ss_dssp             HHHHHHHHTSCCSEEEECSCC
T ss_pred             cccccccCCCCceEEEeccCC
Confidence            4433     368999999874

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.24  E-value=0.00027  Score=56.06  Aligned_cols=35  Identities=29%  Similarity=0.195  Sum_probs=28.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCC---CeEEEEeCCc
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLG---FRVRAGVRSV  114 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G---~~V~~l~R~~  114 (380)
                      .++|.|.||||++|..+++.|.+++   .++..+..+.
T Consensus         2 ~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~   39 (144)
T d2hjsa1           2 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAE   39 (144)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecc
Confidence            3689999999999999999998765   3677665443

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=97.23  E-value=0.00013  Score=60.89  Aligned_cols=83  Identities=17%  Similarity=0.123  Sum_probs=57.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .+.|++|.|.| +|..|.+++..|.+.|++|++..|+++..+.+...-...           .+.+++.+ .-++.-..+
T Consensus         4 ~~~m~KI~ViG-aG~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~~~n~-----------~yl~~~~l-~~~i~~t~~   70 (189)
T d1n1ea2           4 LLYLNKAVVFG-SGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENV-----------LFLKGVQL-ASNITFTSD   70 (189)
T ss_dssp             CCCEEEEEEEC-CSHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHHTBCT-----------TTSTTCBC-CTTEEEESC
T ss_pred             cceeceEEEEC-CCHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhccccc-----------cccccccc-ccccccchh
Confidence            34567899999 899999999999999999999999988776654421110           11122211 112222356


Q ss_pred             HHHHhcCCCEEEEccc
Q 016901          157 IEPALGNASVVICCIG  172 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag  172 (380)
                      ++++++++|.||.+..
T Consensus        71 l~~a~~~ad~iiiavP   86 (189)
T d1n1ea2          71 VEKAYNGAEIILFVIP   86 (189)
T ss_dssp             HHHHHTTCSCEEECSC
T ss_pred             hhhccCCCCEEEEcCc
Confidence            7899999999998763

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=97.21  E-value=0.00046  Score=53.41  Aligned_cols=70  Identities=19%  Similarity=0.199  Sum_probs=57.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      |+++|.| -|-+|..+++.|  +|++|+++..+++..+.+..                   .++.++.||.+|++.++++
T Consensus         1 kHivI~G-~g~~g~~l~~~L--~~~~i~vi~~d~~~~~~~~~-------------------~~~~~i~Gd~~~~~~L~~a   58 (129)
T d2fy8a1           1 RHVVICG-WSESTLECLREL--RGSEVFVLAEDENVRKKVLR-------------------SGANFVHGDPTRVSDLEKA   58 (129)
T ss_dssp             CCEEEES-CCHHHHHHHHTS--CGGGEEEEESCTTHHHHHHH-------------------TTCEEEESCTTSHHHHHHT
T ss_pred             CEEEEEC-CCHHHHHHHHHH--cCCCCEEEEcchHHHHHHHh-------------------cCccccccccCCHHHHHHh
Confidence            4689998 689999999998  56788889999887766543                   6789999999999988876


Q ss_pred             -hcCCCEEEEccc
Q 016901          161 -LGNASVVICCIG  172 (380)
Q Consensus       161 -~~~~d~Vi~~Ag  172 (380)
                       +..++.+|-+..
T Consensus        59 ~i~~A~~vi~~~~   71 (129)
T d2fy8a1          59 NVRGARAVIVNLE   71 (129)
T ss_dssp             TCTTCSEEEECCS
T ss_pred             hhhcCcEEEEecc
Confidence             478999998753

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.19  E-value=0.00085  Score=55.13  Aligned_cols=80  Identities=23%  Similarity=0.260  Sum_probs=51.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      |+|.|.| +|-.|.+++..|.++|++|++..|+.+.  +..+.+......         ..-.......++.-.+++.++
T Consensus         1 MkI~ViG-aG~~GtalA~~la~~g~~V~l~~r~~~~--~~~~~i~~~~~~---------~~~~~~~~~~~i~~~~~~~~~   68 (180)
T d1txga2           1 MIVSILG-AGAMGSALSVPLVDNGNEVRIWGTEFDT--EILKSISAGREH---------PRLGVKLNGVEIFWPEQLEKC   68 (180)
T ss_dssp             CEEEEES-CCHHHHHHHHHHHHHCCEEEEECCGGGH--HHHHHHHTTCCB---------TTTTBCCCSEEEECGGGHHHH
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEecccH--HHHHHHhhhhhh---------hhhcchhccccccccccHHHH
Confidence            6899999 7999999999999999999999996543  112222211100         000111111122235678899


Q ss_pred             hcCCCEEEEccc
Q 016901          161 LGNASVVICCIG  172 (380)
Q Consensus       161 ~~~~d~Vi~~Ag  172 (380)
                      +.++|.||.+..
T Consensus        69 ~~~ad~Ii~avp   80 (180)
T d1txga2          69 LENAEVVLLGVS   80 (180)
T ss_dssp             HTTCSEEEECSC
T ss_pred             Hhccchhhcccc
Confidence            999999998764

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.17  E-value=0.00053  Score=55.36  Aligned_cols=66  Identities=21%  Similarity=0.212  Sum_probs=52.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      |++|.|.| .|-+|+.++++|+++||+|++.+|+.++.+.+..                   ....       ...+..+
T Consensus         1 M~kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~-------------------~~~~-------~~~~~~e   53 (162)
T d3cuma2           1 MKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVA-------------------AGAS-------AARSARD   53 (162)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHH-------------------TTCE-------ECSSHHH
T ss_pred             CCEEEEEE-EHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhh-------------------hhcc-------ccchhhh
Confidence            45799998 8999999999999999999999999887766543                   1111       1244677


Q ss_pred             HhcCCCEEEEccc
Q 016901          160 ALGNASVVICCIG  172 (380)
Q Consensus       160 a~~~~d~Vi~~Ag  172 (380)
                      ++..+|.|+-|..
T Consensus        54 ~~~~~diii~~v~   66 (162)
T d3cuma2          54 AVQGADVVISMLP   66 (162)
T ss_dssp             HHTSCSEEEECCS
T ss_pred             hccccCeeeeccc
Confidence            8889999999874

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=97.15  E-value=0.00058  Score=54.15  Aligned_cols=33  Identities=18%  Similarity=0.062  Sum_probs=26.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC----CeEEEEeCC
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLG----FRVRAGVRS  113 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G----~~V~~l~R~  113 (380)
                      |+|.|.||||++|+.+++.|+++.    .++..++.+
T Consensus         1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~   37 (147)
T d1mb4a1           1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTS   37 (147)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESS
T ss_pred             CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccc
Confidence            579999999999999999998753    356655544

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=97.15  E-value=0.00058  Score=56.53  Aligned_cols=46  Identities=20%  Similarity=0.115  Sum_probs=38.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVK  125 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~  125 (380)
                      +-++|.|.|| |.+|+.++..++.+|++|++++++++..+...+.+.
T Consensus         3 ~I~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i~   48 (186)
T d1wdka3           3 DVKQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAA   48 (186)
T ss_dssp             CCSSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHH
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhhh
Confidence            4568999995 999999999999999999999999987665555443

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.12  E-value=0.0014  Score=53.79  Aligned_cols=42  Identities=24%  Similarity=0.151  Sum_probs=35.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLV  121 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~~~~~~  121 (380)
                      .+.+|||+|| |.||...+..+...|. +|+++++++++.+...
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~   70 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE   70 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH
T ss_pred             CCCEEEEECC-Cccchhheecccccccccccccccccccccccc
Confidence            4678999996 9999999999999997 7999999998776543

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=97.10  E-value=0.002  Score=51.13  Aligned_cols=65  Identities=15%  Similarity=0.106  Sum_probs=48.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      |+|.|.| .|.+|+.+++.|+++|++|++..|+.++.......                   .+.     +  .++..++
T Consensus         1 MkIgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~-------------------~~~-----~--~~~~~e~   53 (152)
T d1i36a2           1 LRVGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERAR-------------------TVG-----V--TETSEED   53 (152)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHH-------------------HHT-----C--EECCHHH
T ss_pred             CEEEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchhHHHHHhhh-------------------ccc-----c--cccHHHH
Confidence            5789998 89999999999999999999988877655443221                   111     1  1235678


Q ss_pred             hcCCCEEEEccc
Q 016901          161 LGNASVVICCIG  172 (380)
Q Consensus       161 ~~~~d~Vi~~Ag  172 (380)
                      ++.+|.||-|..
T Consensus        54 ~~~~diIi~~v~   65 (152)
T d1i36a2          54 VYSCPVVISAVT   65 (152)
T ss_dssp             HHTSSEEEECSC
T ss_pred             HhhcCeEEEEec
Confidence            889999999864

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=97.02  E-value=0.00057  Score=56.63  Aligned_cols=49  Identities=22%  Similarity=0.283  Sum_probs=39.8

Q ss_pred             CCeEEE-EcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhh
Q 016901           80 DNLAFV-AGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMK  128 (380)
Q Consensus        80 ~~~vlV-tGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~  128 (380)
                      +.+++| +||+|.+|...++.....|.+|++++|+.++.++..+.+++++
T Consensus        29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lG   78 (189)
T d1gu7a2          29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELG   78 (189)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHT
T ss_pred             CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhcc
Confidence            455666 6999999999998888889999999999887777666666654

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=97.01  E-value=0.00071  Score=54.01  Aligned_cols=65  Identities=17%  Similarity=0.252  Sum_probs=50.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      |+|.+.| +|-+|+++++.|++.|++|++..|+.++.+++.+..   +               +.+       ..+.+++
T Consensus         1 MkIg~IG-~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~---g---------------~~~-------~~~~~~~   54 (152)
T d2ahra2           1 MKIGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL---A---------------LPY-------AMSHQDL   54 (152)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH---T---------------CCB-------CSSHHHH
T ss_pred             CEEEEEe-ccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccc---c---------------eee-------echhhhh
Confidence            5788998 999999999999999999999999988877664421   1               111       1346777


Q ss_pred             hcCCCEEEEcc
Q 016901          161 LGNASVVICCI  171 (380)
Q Consensus       161 ~~~~d~Vi~~A  171 (380)
                      ++++|+||-+.
T Consensus        55 ~~~~dvIilav   65 (152)
T d2ahra2          55 IDQVDLVILGI   65 (152)
T ss_dssp             HHTCSEEEECS
T ss_pred             hhccceeeeec
Confidence            88999999875

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=96.96  E-value=0.0012  Score=49.59  Aligned_cols=68  Identities=13%  Similarity=0.150  Sum_probs=54.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ...+|.|.| +|.+|+-++....+.|++|++++.+++.....                     ---+++.+|+.|.+.+.
T Consensus        10 ~~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~PA~~---------------------va~~~i~~~~~d~~~l~   67 (111)
T d1kjqa2          10 AATRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADAPAMH---------------------VAHRSHVINMLDGDALR   67 (111)
T ss_dssp             TCCEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTCGGGG---------------------GSSEEEECCTTCHHHHH
T ss_pred             CCCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCCchhh---------------------cCCeEEECCCCCHHHHH
Confidence            456899999 89999999999999999999999887532210                     12367889999999998


Q ss_pred             HHhc--CCCEEE
Q 016901          159 PALG--NASVVI  168 (380)
Q Consensus       159 ~a~~--~~d~Vi  168 (380)
                      +...  ++|+|-
T Consensus        68 ~~~~~~~~DviT   79 (111)
T d1kjqa2          68 RVVELEKPHYIV   79 (111)
T ss_dssp             HHHHHHCCSEEE
T ss_pred             HHHHhhCCceEE
Confidence            8774  679884

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=96.95  E-value=0.001  Score=53.90  Aligned_cols=43  Identities=16%  Similarity=0.126  Sum_probs=36.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLV  121 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G-~~V~~l~R~~~~~~~~~  121 (380)
                      .+.+|+|+|++|.+|...+..+...| .+|++..+++++.+...
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~   70 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK   70 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHH
Confidence            45789999999999999999888888 58999999987765544

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=96.93  E-value=0.0027  Score=51.54  Aligned_cols=43  Identities=16%  Similarity=0.123  Sum_probs=35.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQ  122 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G-~~V~~l~R~~~~~~~~~~  122 (380)
                      .+.+|+|.|+ |.+|...+..+...| .+|++.++++++.+...+
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~   71 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE   71 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHH
Confidence            5679999998 679999999999988 589999999988766543

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=96.89  E-value=0.00065  Score=54.05  Aligned_cols=38  Identities=24%  Similarity=0.244  Sum_probs=34.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchh
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR  116 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~  116 (380)
                      .+++|.|.||.|.+|..+++.|.++||+|.+.+|+...
T Consensus         8 ~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~   45 (152)
T d2pv7a2           8 DIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA   45 (152)
T ss_dssp             TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG
T ss_pred             CCCeEEEEcCCCHHHHHHHHHHHHcCCCcEeccccccc
Confidence            56799999999999999999999999999999987653

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.83  E-value=0.011  Score=47.94  Aligned_cols=73  Identities=14%  Similarity=0.168  Sum_probs=54.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      .+|-|.| .|.+|..+++.|+++||+|++.+|++++.+++.+.             +... ...   . -....+++.++
T Consensus         3 ~nIg~IG-lG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~-------------~~~~-~~~---~-~a~~~~~~~~~   63 (176)
T d2pgda2           3 ADIALIG-LAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLAN-------------EAKG-TKV---L-GAHSLEEMVSK   63 (176)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHT-------------TTTT-SSC---E-ECSSHHHHHHH
T ss_pred             CcEEEEe-EhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHh-------------cccc-ccc---c-chhhhhhhhhh
Confidence            4699999 89999999999999999999999999988876541             1000 000   0 12345667788


Q ss_pred             hcCCCEEEEccc
Q 016901          161 LGNASVVICCIG  172 (380)
Q Consensus       161 ~~~~d~Vi~~Ag  172 (380)
                      +..+|.+|-+..
T Consensus        64 ~~~~~~ii~~~~   75 (176)
T d2pgda2          64 LKKPRRIILLVK   75 (176)
T ss_dssp             BCSSCEEEECSC
T ss_pred             hcccceEEEecC
Confidence            889999998864

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.77  E-value=0.0015  Score=53.91  Aligned_cols=74  Identities=19%  Similarity=0.180  Sum_probs=47.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeE-EEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCCh---h
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRV-RAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR---V  155 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V-~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~---~  155 (380)
                      +.+|||+||+|.+|...++.....|.++ +..+++.++...+...+                 .--.+  .|..+.   +
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~-----------------gad~v--i~~~~~~~~~   91 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSEL-----------------GFDAA--VNYKTGNVAE   91 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHS-----------------CCSEE--EETTSSCHHH
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcc-----------------cceEE--eeccchhHHH
Confidence            4689999999999999998888889764 44566666555443211                 11122  244432   2


Q ss_pred             cHHHHh-cCCCEEEEccc
Q 016901          156 QIEPAL-GNASVVICCIG  172 (380)
Q Consensus       156 ~~~~a~-~~~d~Vi~~Ag  172 (380)
                      .++++. +++|+||.+.|
T Consensus        92 ~~~~~~~~GvDvv~D~vG  109 (187)
T d1vj1a2          92 QLREACPGGVDVYFDNVG  109 (187)
T ss_dssp             HHHHHCTTCEEEEEESSC
T ss_pred             HHHHHhccCceEEEecCC
Confidence            233322 46999999987

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.74  E-value=0.0031  Score=45.55  Aligned_cols=88  Identities=18%  Similarity=0.151  Sum_probs=59.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      .++|+|+|.|. |..|..+++.|.++|++|++.+.+......  +   .             ......+..+...     
T Consensus         3 ~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~~--~---~-------------~~~~~~~~~~~~~-----   58 (93)
T d2jfga1           3 YQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPGL--D---K-------------LPEAVERHTGSLN-----   58 (93)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTTG--G---G-------------SCTTSCEEESBCC-----
T ss_pred             cCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchhH--H---H-------------Hhhccceeecccc-----
Confidence            36789999995 889999999999999999999986542110  0   0             0023444444431     


Q ss_pred             HHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCC
Q 016901          158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN  205 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~  205 (380)
                      ...+.++|.||..-|....                ..++..+++.|++
T Consensus        59 ~~~~~~~d~vi~SPGi~~~----------------~~~~~~a~~~gi~   90 (93)
T d2jfga1          59 DEWLMAADLIVASPGIALA----------------HPSLSAAADAGIE   90 (93)
T ss_dssp             HHHHHHCSEEEECTTSCTT----------------SHHHHHHHHTTCE
T ss_pred             hhhhccCCEEEECCCCCCC----------------CHHHHHHHHcCCC
Confidence            2345688999998875421                1367777777763

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.71  E-value=0.0027  Score=51.27  Aligned_cols=43  Identities=21%  Similarity=0.402  Sum_probs=37.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQ  122 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~~~~~~~  122 (380)
                      .+++|+|.| +|+.|++++..|.+.|. +|.++.|+.++.+.+.+
T Consensus        16 ~~~~vlIlG-aGGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~   59 (167)
T d1npya1          16 KNAKVIVHG-SGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAA   59 (167)
T ss_dssp             TTSCEEEEC-SSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHH
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHH
Confidence            457899999 59999999999999995 79999999998877654

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=96.69  E-value=0.0062  Score=48.83  Aligned_cols=76  Identities=22%  Similarity=0.294  Sum_probs=60.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      +-+|+|.| .|-.|..-++....-|.+|.+++.+.++++.+.....                ..++..   ..+.+.+++
T Consensus        32 pa~V~ViG-aGvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~----------------~~~~~~---~~~~~~l~~   91 (168)
T d1pjca1          32 PGKVVILG-GGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFG----------------SRVELL---YSNSAEIET   91 (168)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG----------------GGSEEE---ECCHHHHHH
T ss_pred             CcEEEEEC-CChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhc----------------ccceee---hhhhhhHHH
Confidence            35899999 8999999999999999999999999998877665432                234443   344678899


Q ss_pred             HhcCCCEEEEccccCc
Q 016901          160 ALGNASVVICCIGASE  175 (380)
Q Consensus       160 a~~~~d~Vi~~Ag~~~  175 (380)
                      .+..+|.||.++-...
T Consensus        92 ~~~~aDivI~aalipG  107 (168)
T d1pjca1          92 AVAEADLLIGAVLVPG  107 (168)
T ss_dssp             HHHTCSEEEECCCCTT
T ss_pred             hhccCcEEEEeeecCC
Confidence            9999999999986443

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.58  E-value=0.0049  Score=49.38  Aligned_cols=42  Identities=19%  Similarity=0.173  Sum_probs=35.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLV  121 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~  121 (380)
                      .+.+|+|.|+ |.+|...+..+...|++|+++++++++.+...
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~   68 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELAR   68 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhh
Confidence            5678999985 99999999888888999999999988776543

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.56  E-value=0.0084  Score=48.07  Aligned_cols=41  Identities=17%  Similarity=0.272  Sum_probs=34.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLV  121 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~--~V~~l~R~~~~~~~~~  121 (380)
                      |++|+|.| .|.+|..+++.|.+.|+  +|++.+|+++..+...
T Consensus         1 Mk~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~   43 (171)
T d2g5ca2           1 MQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV   43 (171)
T ss_dssp             CCEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHH
Confidence            45799998 79999999999999995  7888899887766544

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=96.55  E-value=0.0024  Score=51.96  Aligned_cols=75  Identities=17%  Similarity=0.079  Sum_probs=50.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCCh---
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR---  154 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~---  154 (380)
                      .+.+|+|.|+ |.||...++.+...|. +|+++++++.+.+...+    ++             . .++  .|..+.   
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~----lG-------------a-~~~--i~~~~~~~~   85 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKF----YG-------------A-TDI--LNYKNGHIE   85 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHH----HT-------------C-SEE--ECGGGSCHH
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHHh----hC-------------c-ccc--ccccchhHH
Confidence            4668999985 9999999988888896 79999998877655432    21             1 122  233332   


Q ss_pred             hcHHHHh--cCCCEEEEccccC
Q 016901          155 VQIEPAL--GNASVVICCIGAS  174 (380)
Q Consensus       155 ~~~~~a~--~~~d~Vi~~Ag~~  174 (380)
                      +.+.+..  .++|+||.|+|..
T Consensus        86 ~~v~~~t~g~G~D~vid~~g~~  107 (174)
T d1jqba2          86 DQVMKLTNGKGVDRVIMAGGGS  107 (174)
T ss_dssp             HHHHHHTTTSCEEEEEECSSCT
T ss_pred             HHHHHHhhccCcceEEEccCCH
Confidence            3344444  3599999999853

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.55  E-value=0.00067  Score=55.56  Aligned_cols=47  Identities=23%  Similarity=0.323  Sum_probs=40.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHh
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQ  126 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~  126 (380)
                      .++++|+|.| +|+.++.++..|.+.| +|+++.|+.++.+.+.+.+..
T Consensus        16 ~~~k~vlIlG-aGG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~   62 (177)
T d1nvta1          16 VKDKNIVIYG-AGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAE   62 (177)
T ss_dssp             CCSCEEEEEC-CSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHH
T ss_pred             cCCCEEEEEC-CcHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHH
Confidence            3678999999 7889999999997766 899999999999888776654

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.54  E-value=0.012  Score=48.62  Aligned_cols=75  Identities=23%  Similarity=0.267  Sum_probs=50.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCCh---
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR---  154 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~---  154 (380)
                      .+.+|+|.| +|.+|...+..+...|. +|++.++++++.+...+                   -+...+. |-.+.   
T Consensus        25 ~G~tVlV~G-aG~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~-------------------~Ga~~~~-~~~~~~~~   83 (195)
T d1kola2          25 PGSTVYVAG-AGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA-------------------QGFEIAD-LSLDTPLH   83 (195)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH-------------------TTCEEEE-TTSSSCHH
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHhhcccceeeecccchhhHhhhh-------------------ccccEEE-eCCCcCHH
Confidence            567999998 59999888888777786 78888898887765443                   2233322 32222   


Q ss_pred             hcHHHHhc--CCCEEEEccccC
Q 016901          155 VQIEPALG--NASVVICCIGAS  174 (380)
Q Consensus       155 ~~~~~a~~--~~d~Vi~~Ag~~  174 (380)
                      +.+.++..  ++|.+|.+.|..
T Consensus        84 ~~i~~~t~g~g~D~vid~vG~~  105 (195)
T d1kola2          84 EQIAALLGEPEVDCAVDAVGFE  105 (195)
T ss_dssp             HHHHHHHSSSCEEEEEECCCTT
T ss_pred             HHHHHHhCCCCcEEEEECcccc
Confidence            23334433  589999999843

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=96.53  E-value=0.00069  Score=55.45  Aligned_cols=34  Identities=26%  Similarity=0.109  Sum_probs=28.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCC
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRS  113 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G-~~V~~l~R~  113 (380)
                      |++|.|.||||++|..+++.|.++. .++..+..+
T Consensus         1 MikVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~   35 (176)
T d1vkna1           1 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSR   35 (176)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECS
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCCceEEEeecc
Confidence            4689999999999999999999875 577766544

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.52  E-value=0.0051  Score=49.69  Aligned_cols=41  Identities=17%  Similarity=0.123  Sum_probs=32.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENL  120 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~~~~~  120 (380)
                      .+.+|+|.|+ |++|...++.+...|. .|++.++++++.+..
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~a   69 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARA   69 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHH
Confidence            5678999997 6899999999988995 677777777775543

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.46  E-value=0.0078  Score=48.78  Aligned_cols=41  Identities=20%  Similarity=0.082  Sum_probs=34.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENL  120 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~~~~~  120 (380)
                      .+.+|+|+| +|.||...+..+...|. .|++.++++.+.+..
T Consensus        28 ~G~~VlV~G-~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a   69 (174)
T d1e3ia2          28 PGSTCAVFG-LGCVGLSAIIGCKIAGASRIIAIDINGEKFPKA   69 (174)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH
T ss_pred             CCCEEEEEC-CChHHHHHHHHHHHhCCceeeeeccchHHHHHH
Confidence            567899998 69999999999999997 677888888776544

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.43  E-value=0.009  Score=48.48  Aligned_cols=42  Identities=19%  Similarity=0.165  Sum_probs=36.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLV  121 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G-~~V~~l~R~~~~~~~~~  121 (380)
                      .+.+|+|+| .|.+|...+..+...| .+|+++++++++.+...
T Consensus        29 ~g~tVlI~G-~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak   71 (176)
T d1d1ta2          29 PGSTCVVFG-LGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAM   71 (176)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH
T ss_pred             CCCEEEEEC-CCchhHHHHHHHHHcCCceEEEecCcHHHHHHHH
Confidence            567899998 5999999999999999 58999999998876543

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.43  E-value=0.0068  Score=48.43  Aligned_cols=69  Identities=23%  Similarity=0.272  Sum_probs=53.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .+.+|+++|.| .|.||+.+++.|...|.+|++...++-+.-+  ..+                 ...+        ...
T Consensus        21 ~l~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~~al~--A~~-----------------dG~~--------v~~   72 (163)
T d1li4a1          21 MIAGKVAVVAG-YGDVGKGCAQALRGFGARVIITEIDPINALQ--AAM-----------------EGYE--------VTT   72 (163)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHH--HHH-----------------TTCE--------ECC
T ss_pred             eecCCEEEEec-cccccHHHHHHHHhCCCeeEeeecccchhHH--hhc-----------------CceE--------eee
Confidence            35789999999 9999999999999999999999998854322  111                 2222        345


Q ss_pred             HHHHhcCCCEEEEcccc
Q 016901          157 IEPALGNASVVICCIGA  173 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag~  173 (380)
                      +++++...|+||-+.|.
T Consensus        73 ~~~a~~~adivvtaTGn   89 (163)
T d1li4a1          73 MDEACQEGNIFVTTTGC   89 (163)
T ss_dssp             HHHHTTTCSEEEECSSC
T ss_pred             hhhhhhhccEEEecCCC
Confidence            77888899999998874

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=96.41  E-value=0.0017  Score=53.39  Aligned_cols=35  Identities=29%  Similarity=0.401  Sum_probs=28.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCC
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRS  113 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G-~~V~~l~R~  113 (380)
                      ++.+|.|.||||++|..+++.|.++. .++..+..+
T Consensus         4 ~kikVaIlGATGyvG~elirLL~~HP~~ei~~l~S~   39 (183)
T d2cvoa1           4 EEVRIAVLGASGYTGAEIVRLLANHPQFRIKVMTAD   39 (183)
T ss_dssp             SCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECS
T ss_pred             CccEEEEECcccHHHHHHHHHHHhCCCceEEEEecc
Confidence            56789999999999999999999885 577666533

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=96.37  E-value=0.0053  Score=48.55  Aligned_cols=41  Identities=22%  Similarity=0.422  Sum_probs=36.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQ  122 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G-~~V~~l~R~~~~~~~~~~  122 (380)
                      |+|.+.| +|-+|.++++.|+++| ++|++.+|++++.+.+.+
T Consensus         1 MkI~fIG-~G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~   42 (152)
T d1yqga2           1 MNVYFLG-GGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEK   42 (152)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHH
T ss_pred             CEEEEEc-CcHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhh
Confidence            5799998 6999999999999887 999999999988777654

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=96.30  E-value=0.021  Score=43.68  Aligned_cols=90  Identities=11%  Similarity=0.061  Sum_probs=62.4

Q ss_pred             CCCCeEEEEcCC---ChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCC
Q 016901           78 KDDNLAFVAGAT---GKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK  153 (380)
Q Consensus        78 ~~~~~vlVtGat---G~iG~~lv~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d  153 (380)
                      ++.++|.|.||+   +..|..+.+.|.+.| .+|+.+..+....                        .++..       
T Consensus         6 f~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i------------------------~G~~~-------   54 (129)
T d2csua1           6 FNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEV------------------------QGVKA-------   54 (129)
T ss_dssp             TSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEE------------------------TTEEC-------
T ss_pred             CCCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCcccc------------------------CCeEe-------
Confidence            366899999999   999999999987766 6898886543211                        11111       


Q ss_pred             hhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCC
Q 016901          154 RVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (380)
Q Consensus       154 ~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~  214 (380)
                      ..++.++=..+|.++-+...                ..+..+++.|.+.|++.++.+|+..
T Consensus        55 y~sl~dlp~~vDlvvi~vp~----------------~~~~~~~~~~~~~g~~~~vi~s~Gf   99 (129)
T d2csua1          55 YKSVKDIPDEIDLAIIVVPK----------------RFVKDTLIQCGEKGVKGVVIITAGF   99 (129)
T ss_dssp             BSSTTSCSSCCSEEEECSCH----------------HHHHHHHHHHHHHTCCEEEECCCSS
T ss_pred             ecchhhcCCCCceEEEecCh----------------HHhHHHHHHHHHcCCCEEEEecccc
Confidence            12233333568999887632                3466788999999999888887644

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.27  E-value=0.0067  Score=45.49  Aligned_cols=35  Identities=23%  Similarity=0.133  Sum_probs=31.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCc
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV  114 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~  114 (380)
                      .+++++|.| .|++|..++..|.+.|++|+++.|.+
T Consensus        20 ~p~~vvIiG-gG~~G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          20 LPQHLVVVG-GGYIGLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHhhcccceEEEeeec
Confidence            346899998 89999999999999999999998854

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=96.23  E-value=0.025  Score=48.20  Aligned_cols=105  Identities=12%  Similarity=0.254  Sum_probs=69.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCc-------------------hhHHHHHHHHHhhhhcccccccCC
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKGI  138 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~  138 (380)
                      ...+|+|.| .|++|++++..|++.|. ++++++.+.                   .|.+.+.+.+++.+          
T Consensus        29 ~~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~n----------   97 (247)
T d1jw9b_          29 KDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRIN----------   97 (247)
T ss_dssp             HHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHC----------
T ss_pred             hCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhh----------
Confidence            456899999 89999999999999996 677766432                   25555655555543          


Q ss_pred             CCCCceEEEEcCCC-ChhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccC
Q 016901          139 QPVEMLELVECDLE-KRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL  213 (380)
Q Consensus       139 ~~~~~v~~~~~Dl~-d~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~  213 (380)
                         +.+.+...+.. +.......+...|+||.+..               |...-..+-++|.+.++. +|+.+..
T Consensus        98 ---p~~~i~~~~~~~~~~~~~~~~~~~divid~~d---------------~~~~~~~in~~~~~~~ip-~i~g~~~  154 (247)
T d1jw9b_          98 ---PHIAITPVNALLDDAELAALIAEHDLVLDCTD---------------NVAVRNQLNAGCFAAKVP-LVSGAAI  154 (247)
T ss_dssp             ---TTSEEEEECSCCCHHHHHHHHHTSSEEEECCS---------------SHHHHHHHHHHHHHHTCC-EEEEEEE
T ss_pred             ---cccchhhhhhhhhhccccccccccceeeeccc---------------hhhhhhhHHHHHHHhCCC-ccccccc
Confidence               44544444432 23455667788999998753               233344556777777764 6665543

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=96.22  E-value=0.0084  Score=48.48  Aligned_cols=117  Identities=14%  Similarity=0.085  Sum_probs=71.4

Q ss_pred             CCeEEEEcCCChHHHH--HHHHHHHC----CCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCC
Q 016901           80 DNLAFVAGATGKVGSR--TVRELLKL----GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK  153 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~--lv~~Ll~~----G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d  153 (380)
                      .|+|.|.|| |.+|..  ++..|+..    +.++++++.++++++.....+....-..         ....++..     
T Consensus         2 ~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~---------~~~~~i~~-----   66 (171)
T d1obba1           2 SVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEV---------GADLKFEK-----   66 (171)
T ss_dssp             CCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHT---------TCCCEEEE-----
T ss_pred             CcEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhc---------CCCeEEEE-----
Confidence            368999995 888865  34445543    3589999999988776555444322100         02222222     


Q ss_pred             hhcHHHHhcCCCEEEEccccCcccc---------------------CC-----CCCcchhhHHHHHHHHHHHHHcCCCEE
Q 016901          154 RVQIEPALGNASVVICCIGASEKEV---------------------FD-----ITGPYRIDFQATKNLVDAATIAKVNHF  207 (380)
Q Consensus       154 ~~~~~~a~~~~d~Vi~~Ag~~~~~~---------------------~~-----~~~~~~~nv~g~~~ll~a~~~~~v~r~  207 (380)
                      ..+.++++.++|+||++++......                     .+     ......-|+.-.+.+++.+++...+-+
T Consensus        67 ~td~~eaL~dad~Vv~~~~~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~g~~~~~~~~rn~~i~~~i~~~i~~~~p~a~  146 (171)
T d1obba1          67 TMNLDDVIIDADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAW  146 (171)
T ss_dssp             ESCHHHHHTTCSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCE
T ss_pred             eCChhhcccCCCeEeeecccccccceeeehhcchhhhhccCCCccccCCCCCcceeeecchHHHHHHHHHHHHHHCcCeE
Confidence            3457789999999999987542110                     00     000123477788888998888876645


Q ss_pred             EEEc
Q 016901          208 IMVS  211 (380)
Q Consensus       208 V~~S  211 (380)
                      ++.-
T Consensus       147 ~i~~  150 (171)
T d1obba1         147 YLQA  150 (171)
T ss_dssp             EEEC
T ss_pred             EEEE
Confidence            4443

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.21  E-value=0.013  Score=47.34  Aligned_cols=42  Identities=17%  Similarity=0.136  Sum_probs=35.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLV  121 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~~~~~~  121 (380)
                      .+.+|+|.|+ |.+|...+..+...|. +|++.++++++.+...
T Consensus        27 ~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~   69 (174)
T d1p0fa2          27 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI   69 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHH
Confidence            5678999995 9999999999999995 7888889988876554

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=96.20  E-value=0.0043  Score=49.33  Aligned_cols=24  Identities=33%  Similarity=0.483  Sum_probs=21.9

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCC
Q 016901           82 LAFVAGATGKVGSRTVRELLKLGF  105 (380)
Q Consensus        82 ~vlVtGatG~iG~~lv~~Ll~~G~  105 (380)
                      +|.|.||||++|..|++.|.++.+
T Consensus         3 kVaIvGATGyvG~eLirlL~~H~f   26 (154)
T d2gz1a1           3 TVAVVGATGAVGAQMIKMLEESTL   26 (154)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCCS
T ss_pred             EEEEECCCcHHHHHHHHHHHcCCC
Confidence            699999999999999999988864

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.20  E-value=0.019  Score=43.97  Aligned_cols=30  Identities=13%  Similarity=0.197  Sum_probs=26.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEE
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAG  110 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l  110 (380)
                      |+|.|.|++|..|+.+.+.+.++|+++++.
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~   30 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLK   30 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHhcCCCeEEEE
Confidence            579999999999999999988999988764

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=96.14  E-value=0.009  Score=48.78  Aligned_cols=64  Identities=25%  Similarity=0.347  Sum_probs=50.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      ..+++|.|.| .|.||+.+++.|..-|.+|++.+|.+..                                ++..-.+++
T Consensus        40 l~gk~vgIiG-~G~IG~~va~~l~~~g~~v~~~d~~~~~--------------------------------~~~~~~~~l   86 (181)
T d1qp8a1          40 IQGEKVAVLG-LGEIGTRVGKILAALGAQVRGFSRTPKE--------------------------------GPWRFTNSL   86 (181)
T ss_dssp             CTTCEEEEES-CSTHHHHHHHHHHHTTCEEEEECSSCCC--------------------------------SSSCCBSCS
T ss_pred             ccCceEEEec-cccccccceeeeeccccccccccccccc--------------------------------cceeeeech
Confidence            4788999999 8999999999999999999999887531                                111113468


Q ss_pred             HHHhcCCCEEEEccccC
Q 016901          158 EPALGNASVVICCIGAS  174 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag~~  174 (380)
                      ++++..+|+|+.++...
T Consensus        87 ~ell~~sDiv~~~~pl~  103 (181)
T d1qp8a1          87 EEALREARAAVCALPLN  103 (181)
T ss_dssp             HHHHTTCSEEEECCCCS
T ss_pred             hhhhhccchhhcccccc
Confidence            89999999999887543

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=96.13  E-value=0.0039  Score=50.69  Aligned_cols=41  Identities=22%  Similarity=0.332  Sum_probs=37.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQ  122 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~  122 (380)
                      |+|-|.| .|.+|..++++|+++||+|.+.+|++++.+++.+
T Consensus         2 MkIGvIG-lG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~   42 (178)
T d1pgja2           2 MDVGVVG-LGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMK   42 (178)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHH
T ss_pred             CEEEEEe-ehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH
Confidence            5799998 9999999999999999999999999998887765

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=96.12  E-value=0.013  Score=47.18  Aligned_cols=74  Identities=18%  Similarity=0.143  Sum_probs=48.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeE-EEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh--
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRV-RAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV--  155 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V-~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~--  155 (380)
                      .+.+|+|.|+ |.+|...+..+...|.++ ++.++++.+.+...+    +              .-.+++  |..+.+  
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~----~--------------Ga~~~i--~~~~~~~~   86 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAKQ----L--------------GATHVI--NSKTQDPV   86 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHH----H--------------TCSEEE--ETTTSCHH
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHHH----c--------------CCeEEE--eCCCcCHH
Confidence            5678999996 999999998888888755 556677766554432    2              112333  333322  


Q ss_pred             -cHHHHh-cCCCEEEEcccc
Q 016901          156 -QIEPAL-GNASVVICCIGA  173 (380)
Q Consensus       156 -~~~~a~-~~~d~Vi~~Ag~  173 (380)
                       .+.++. +++|+||.|.|.
T Consensus        87 ~~i~~~t~gg~D~vid~~G~  106 (174)
T d1f8fa2          87 AAIKEITDGGVNFALESTGS  106 (174)
T ss_dssp             HHHHHHTTSCEEEEEECSCC
T ss_pred             HHHHHHcCCCCcEEEEcCCc
Confidence             222332 359999999874

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=96.04  E-value=0.026  Score=43.73  Aligned_cols=86  Identities=13%  Similarity=0.023  Sum_probs=59.8

Q ss_pred             CCCeEEEEcCC---ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh
Q 016901           79 DDNLAFVAGAT---GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (380)
Q Consensus        79 ~~~~vlVtGat---G~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~  155 (380)
                      +.++|.|.||+   +..|..+++.|.+.||+|+.+.......                        .+...       ..
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i------------------------~G~~~-------~~   66 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEV------------------------LGRKC-------YP   66 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE------------------------TTEEC-------BS
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCccccc------------------------CCCcc-------cc
Confidence            35789999998   7899999999999999998876543211                        11111       23


Q ss_pred             cHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEc
Q 016901          156 QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVS  211 (380)
Q Consensus       156 ~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~S  211 (380)
                      ++.++-..+|.|+-+..                -..+..+++.|.+.|++.+++..
T Consensus        67 sl~dlp~~iD~v~i~vp----------------~~~~~~~~~e~~~~g~k~v~~~~  106 (139)
T d2d59a1          67 SVLDIPDKIEVVDLFVK----------------PKLTMEYVEQAIKKGAKVVWFQY  106 (139)
T ss_dssp             SGGGCSSCCSEEEECSC----------------HHHHHHHHHHHHHHTCSEEEECT
T ss_pred             cccccCccceEEEEEeC----------------HHHHHHHHHHHHHhCCCEEEEec
Confidence            34444456898887753                23467788888888998666533

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=95.95  E-value=0.029  Score=42.03  Aligned_cols=82  Identities=17%  Similarity=0.220  Sum_probs=56.9

Q ss_pred             CeEEEEcCC---ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           81 NLAFVAGAT---GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        81 ~~vlVtGat---G~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      |+|.|.|++   +..|..+++.|++.||+|+.+..+.+..                        .++.       -..++
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~i------------------------~G~~-------~y~sl   50 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEI------------------------EGLK-------CYRSV   50 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE------------------------TTEE-------CBSSG
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccccccc------------------------cCcc-------ccccc
Confidence            579999988   7799999999999999998875432210                        1111       12334


Q ss_pred             HHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEE
Q 016901          158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIM  209 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~  209 (380)
                      .++=..+|.++-+...                ..+..+++.|.+.|++.+++
T Consensus        51 ~~lp~~~D~vvi~vp~----------------~~~~~~l~~~~~~g~k~v~~   86 (116)
T d1y81a1          51 RELPKDVDVIVFVVPP----------------KVGLQVAKEAVEAGFKKLWF   86 (116)
T ss_dssp             GGSCTTCCEEEECSCH----------------HHHHHHHHHHHHTTCCEEEE
T ss_pred             hhccccceEEEEEeCH----------------HHHHHHHHHHHhcCCceEEe
Confidence            4444578988877532                34667888888999987654

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=95.94  E-value=0.015  Score=46.69  Aligned_cols=76  Identities=14%  Similarity=0.120  Sum_probs=48.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      .+.+|+|.|+ |.+|...+..+...|. .|++.++++++.+...+    +              ...+++..+=.+.+.+
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~----~--------------ga~~~i~~~~~~~~~~   92 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAER----L--------------GADHVVDARRDPVKQV   92 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHH----T--------------TCSEEEETTSCHHHHH
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhh----c--------------ccceeecCcccHHHHH
Confidence            4568999985 9999999988887885 67777888877665443    1              1223333221112333


Q ss_pred             HHHh--cCCCEEEEcccc
Q 016901          158 EPAL--GNASVVICCIGA  173 (380)
Q Consensus       158 ~~a~--~~~d~Vi~~Ag~  173 (380)
                      .+..  .++|+||.++|.
T Consensus        93 ~~~~~~~g~d~vid~~g~  110 (172)
T d1h2ba2          93 MELTRGRGVNVAMDFVGS  110 (172)
T ss_dssp             HHHTTTCCEEEEEESSCC
T ss_pred             HHhhCCCCceEEEEecCc
Confidence            3333  358999999984

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.93  E-value=0.015  Score=46.23  Aligned_cols=42  Identities=19%  Similarity=0.164  Sum_probs=35.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLV  121 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~  121 (380)
                      .+.+|+|.| +|.+|...+..+...|++|+++++++++.+...
T Consensus        27 ~g~~vlv~G-~G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k   68 (168)
T d1rjwa2          27 PGEWVAIYG-IGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK   68 (168)
T ss_dssp             TTCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CCCEEEEee-cccchhhhhHHHhcCCCeEeccCCCHHHhhhhh
Confidence            457899997 599999998888889999999999998876543

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=95.91  E-value=0.0035  Score=50.61  Aligned_cols=80  Identities=14%  Similarity=0.123  Sum_probs=49.8

Q ss_pred             CCeEEEEcCCChHHH-HHHHHHHHC-----CCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCC
Q 016901           80 DNLAFVAGATGKVGS-RTVRELLKL-----GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK  153 (380)
Q Consensus        80 ~~~vlVtGatG~iG~-~lv~~Ll~~-----G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d  153 (380)
                      ..+|.|.||.+ +|. .++..|+.+     +.+|++++.++++++.....++.+.-..     +    ....+..     
T Consensus         3 ~~KI~iIGaGs-v~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~-----~----~~~~~~~-----   67 (167)
T d1u8xx1           3 SFSIVIAGGGS-TFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREK-----A----PDIEFAA-----   67 (167)
T ss_dssp             CEEEEEECTTS-SSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHH-----C----TTSEEEE-----
T ss_pred             CceEEEECCCh-hhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHh-----C----CCcceEe-----
Confidence            45789999754 444 345555543     2489999999988775555544331100     0    1222222     


Q ss_pred             hhcHHHHhcCCCEEEEccccC
Q 016901          154 RVQIEPALGNASVVICCIGAS  174 (380)
Q Consensus       154 ~~~~~~a~~~~d~Vi~~Ag~~  174 (380)
                      ..+..++++++|+||.+||..
T Consensus        68 ~~d~~eal~~AD~Vvitag~~   88 (167)
T d1u8xx1          68 TTDPEEAFTDVDFVMAHIRVG   88 (167)
T ss_dssp             ESCHHHHHSSCSEEEECCCTT
T ss_pred             cCChhhccCCCCEEEECCCcC
Confidence            235678999999999999865

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=95.77  E-value=0.0053  Score=49.27  Aligned_cols=99  Identities=17%  Similarity=0.226  Sum_probs=59.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEe-CCchhHHHHHHHHHhhhhcccccccCCCCCCceE-EEEcCCCChh
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKL-GFRVRAGV-RSVQRAENLVQSVKQMKLDGELANKGIQPVEMLE-LVECDLEKRV  155 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~-G~~V~~l~-R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~Dl~d~~  155 (380)
                      ..++|.|.|++|.+|+.+++.+.+. +.++++.. |......                  +... ..+. ....++.-..
T Consensus         3 s~ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~------------------g~d~-~~~~~~~~~~~~~~~   63 (162)
T d1diha1           3 ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLL------------------GSDA-GELAGAGKTGVTVQS   63 (162)
T ss_dssp             CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTC------------------SCCT-TCSSSSSCCSCCEES
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhc------------------cchh-hhhhccccCCceeec
Confidence            3468999999999999999999886 56765544 4322110                  0000 0000 0001111123


Q ss_pred             cHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCC
Q 016901          156 QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (380)
Q Consensus       156 ~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~  214 (380)
                      +++.++..+|+||...-                -.++...++.|.+.++ .+| ++|.|
T Consensus        64 ~~~~~~~~~DViIDFs~----------------p~~~~~~~~~a~~~~~-~~V-iGTTG  104 (162)
T d1diha1          64 SLDAVKDDFDVFIDFTR----------------PEGTLNHLAFCRQHGK-GMV-IGTTG  104 (162)
T ss_dssp             CSTTTTTSCSEEEECSC----------------HHHHHHHHHHHHHTTC-EEE-ECCCC
T ss_pred             cHHHHhcccceEEEecc----------------HHHHHHHHHHHHhccc-eeE-EecCC
Confidence            44566788999998752                2467788899999986 455 44444

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=95.67  E-value=0.012  Score=48.70  Aligned_cols=67  Identities=15%  Similarity=0.070  Sum_probs=50.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      ..+++|.|.| .|.||+.+++.|..-|.+|++.++........                     ..        ....++
T Consensus        41 l~gk~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~~~~~~~~---------------------~~--------~~~~~l   90 (197)
T d1j4aa1          41 VRDQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRNPELEK---------------------KG--------YYVDSL   90 (197)
T ss_dssp             GGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCHHHHH---------------------TT--------CBCSCH
T ss_pred             ccCCeEEEec-ccccchhHHHhHhhhcccccccCccccccccc---------------------ce--------eeeccc
Confidence            3678999999 99999999999998999999998765432211                     11        123568


Q ss_pred             HHHhcCCCEEEEccccC
Q 016901          158 EPALGNASVVICCIGAS  174 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag~~  174 (380)
                      .+++..+|+|+.++...
T Consensus        91 ~~~l~~sDii~~~~plt  107 (197)
T d1j4aa1          91 DDLYKQADVISLHVPDV  107 (197)
T ss_dssp             HHHHHHCSEEEECSCCC
T ss_pred             cccccccccccccCCcc
Confidence            88899999888877543

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=95.65  E-value=0.006  Score=50.33  Aligned_cols=39  Identities=23%  Similarity=0.094  Sum_probs=32.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLV  121 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~  121 (380)
                      |+|.|.| .|++|..++..| ++|++|++++-++.+...+.
T Consensus         1 MkI~ViG-lG~vGl~~a~~~-a~g~~V~g~Din~~~v~~l~   39 (196)
T d1dlja2           1 MKIAVAG-SGYVGLSLGVLL-SLQNEVTIVDILPSKVDKIN   39 (196)
T ss_dssp             CEEEEEC-CSHHHHHHHHHH-TTTSEEEEECSCHHHHHHHH
T ss_pred             CEEEEEC-CChhHHHHHHHH-HCCCcEEEEECCHHHHHHHh
Confidence            6799997 999999998655 67999999999988766553

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=95.53  E-value=0.017  Score=43.19  Aligned_cols=34  Identities=18%  Similarity=0.073  Sum_probs=31.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCc
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV  114 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~  114 (380)
                      +++|+|.| .|++|..++..|.+.|.+|.++.|.+
T Consensus        21 p~~vvIiG-gG~ig~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          21 PERVAVVG-AGYIGVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEEC-CChhhHHHHHHhhccccEEEEEeecc
Confidence            46899999 89999999999999999999999865

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=95.50  E-value=0.031  Score=46.22  Aligned_cols=43  Identities=21%  Similarity=0.241  Sum_probs=37.4

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHH
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL  120 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~  120 (380)
                      +.++++|+|-| -|-+|.++++.|.+.|.+|++.+.+.......
T Consensus        24 ~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~   66 (201)
T d1c1da1          24 SLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHA   66 (201)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHH
Confidence            35789999999 99999999999999999999988887665543

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=95.40  E-value=0.027  Score=45.62  Aligned_cols=93  Identities=15%  Similarity=0.112  Sum_probs=55.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhh-hcccccccCCCC-CCceEEEEcCC--CChhc
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMK-LDGELANKGIQP-VEMLELVECDL--EKRVQ  156 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~v~~~~~Dl--~d~~~  156 (380)
                      -+|+|.| .|-.|..-++....-|..|.+++.++.+.+++.+...+.- +.... ....+. .....-..-++  ...+.
T Consensus        30 a~VvViG-aGvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~~~~i~~~~~~-~~~~~~~~gyA~~~s~~~~~~~~~~  107 (183)
T d1l7da1          30 ARVLVFG-VGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEA-MKTAETAGGYAKEMGEEFRKKQAEA  107 (183)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC------------------------CCHHHH
T ss_pred             cEEEEEc-CcHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhhcceEEEeccc-cccccccccchhhcCHHHHHHHHHH
Confidence            3799999 8999999999999999999999999988877765221100 00000 000000 00000000111  12356


Q ss_pred             HHHHhcCCCEEEEccccCc
Q 016901          157 IEPALGNASVVICCIGASE  175 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag~~~  175 (380)
                      +.+.+..+|.||-++-...
T Consensus       108 l~~~l~~aDlVI~talipG  126 (183)
T d1l7da1         108 VLKELVKTDIAITTALIPG  126 (183)
T ss_dssp             HHHHHTTCSEEEECCCCTT
T ss_pred             HHHHHHhhhhheeeeecCC
Confidence            7777889999999886543

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=95.38  E-value=0.013  Score=47.14  Aligned_cols=101  Identities=16%  Similarity=0.197  Sum_probs=60.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEe-CCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKL-GFRVRAGV-RSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~-G~~V~~l~-R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ++.+|.|.| +|.+|+..++.|.+. +.+++++. |+....                        .......     ..+
T Consensus         2 ~kirvgiiG-~G~ig~~~~~~l~~~~~~elvav~~~~~~~~------------------------~~~~~~~-----~~~   51 (170)
T d1f06a1           2 TNIRVAIVG-YGNLGRSVEKLIAKQPDMDLVGIFSRRATLD------------------------TKTPVFD-----VAD   51 (170)
T ss_dssp             CCEEEEEEC-CSHHHHHHHHHHTTCSSEEEEEEEESSSCCS------------------------SSSCEEE-----GGG
T ss_pred             CcceEEEEC-ChHHHHHHHHHHHhCCCcEEEEEEecccccc------------------------ccccccc-----chh
Confidence            456899999 799999999999876 57777654 443221                        1111111     223


Q ss_pred             HHHHhcCCCEEEEccccCcc------------ccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEc
Q 016901          157 IEPALGNASVVICCIGASEK------------EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVS  211 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag~~~~------------~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~S  211 (380)
                      +..+..++|+|+.+.+...+            +...-+.....+......+.+++++.+.  .++++
T Consensus        52 ~~~~~~~~D~Vvi~tp~~~h~~~a~~aL~aG~~vv~~~~~~~~~~~~~~~l~~~A~~~~~--~~~i~  116 (170)
T d1f06a1          52 VDKHADDVDVLFLCMGSATDIPEQAPKFAQFACTVDTYDNHRDIPRHRQVMNEAATAAGN--VALVS  116 (170)
T ss_dssp             GGGTTTTCSEEEECSCTTTHHHHHHHHHTTTSEEECCCCCGGGHHHHHHHHHHHHHHHTC--EEECS
T ss_pred             hhhhccccceEEEeCCCcccHHHHHHHHHCCCcEEEecCccccCHHHHHHHHHHHHhcCc--eEEEe
Confidence            44556789999988764321            1011122344455666677777777764  44444

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.36  E-value=0.0072  Score=49.22  Aligned_cols=31  Identities=19%  Similarity=0.211  Sum_probs=26.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCC-CeEEEE
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLG-FRVRAG  110 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G-~~V~~l  110 (380)
                      |++|.|.||||++|..|++.|.++. +++..+
T Consensus         1 MikVaIiGATGyvG~eLlrlL~~HP~~ei~~l   32 (179)
T d2g17a1           1 MLNTLIVGASGYAGAELVSYVNRHPHMTITAL   32 (179)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEE
T ss_pred             CcEEEEECcccHHHHHHHHHHHhCCCCceEee
Confidence            5789999999999999999999984 677554

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.30  E-value=0.043  Score=40.82  Aligned_cols=36  Identities=17%  Similarity=0.126  Sum_probs=32.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCch
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ  115 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~  115 (380)
                      .+++++|.| .|++|..++..|.+.|.+|+++.|.+.
T Consensus        21 ~p~~v~IiG-gG~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          21 VPKSLVVIG-GGYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             cCCeEEEEC-CCccceeeeeeecccccEEEEEEecce
Confidence            346899999 899999999999999999999998663

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=95.29  E-value=0.021  Score=46.96  Aligned_cols=69  Identities=16%  Similarity=0.139  Sum_probs=51.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      ..++++.|.| .|-||+.+++.|..-|.+|++.++.........                    .       ++....++
T Consensus        47 L~gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~--------------------~-------~~~~~~~l   98 (193)
T d1mx3a1          47 IRGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLSDGVERA--------------------L-------GLQRVSTL   98 (193)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCTTHHHH--------------------H-------TCEECSSH
T ss_pred             eeCceEEEec-cccccccceeeeeccccceeeccCcccccchhh--------------------h-------ccccccch
Confidence            4788999999 999999999999989999999988654322111                    0       11223568


Q ss_pred             HHHhcCCCEEEEccccC
Q 016901          158 EPALGNASVVICCIGAS  174 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag~~  174 (380)
                      ++++..+|+|+.+....
T Consensus        99 ~~ll~~sD~i~~~~plt  115 (193)
T d1mx3a1          99 QDLLFHSDCVTLHCGLN  115 (193)
T ss_dssp             HHHHHHCSEEEECCCCC
T ss_pred             hhccccCCEEEEeeccc
Confidence            88889999988877543

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.26  E-value=0.056  Score=49.99  Aligned_cols=79  Identities=16%  Similarity=0.236  Sum_probs=54.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCc-------------------hhHHHHHHHHHhhhhcccccccCC
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKGI  138 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~  138 (380)
                      ...+|||.|+ |++|.++++.|+..|. ++.+++.+.                   .+.+...+.+.+++          
T Consensus        36 ~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~n----------  104 (426)
T d1yovb1          36 DTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRV----------  104 (426)
T ss_dssp             HHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHS----------
T ss_pred             hcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhC----------
Confidence            4568999995 7799999999999996 788877633                   24444444444432          


Q ss_pred             CCCCceEEEEcCCCChhcHHHHhcCCCEEEEcc
Q 016901          139 QPVEMLELVECDLEKRVQIEPALGNASVVICCI  171 (380)
Q Consensus       139 ~~~~~v~~~~~Dl~d~~~~~~a~~~~d~Vi~~A  171 (380)
                       +.-++..+..++.+..  .+.++++|+||.+.
T Consensus       105 -p~v~i~~~~~~i~~~~--~~~~~~~DlVi~~~  134 (426)
T d1yovb1         105 -PNCNVVPHFNKIQDFN--DTFYRQFHIIVCGL  134 (426)
T ss_dssp             -TTCCCEEECSCGGGBC--HHHHTTCSEEEECC
T ss_pred             -CCCceEeeeccccchH--HHHHHhcchheecc
Confidence             1134566666665533  46789999999875

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.12  E-value=0.085  Score=42.28  Aligned_cols=97  Identities=12%  Similarity=0.094  Sum_probs=58.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeC-CchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcC-------
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVR-SVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECD-------  150 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G-~~V~~l~R-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D-------  150 (380)
                      .++|.|-| .|.||+.+++.|++++ .+|+.+.. ++......   +...               ++..+..+       
T Consensus         2 ~irIaING-fGRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~---l~~~---------------~~~~~~~~~~~~~~~   62 (172)
T d2czca2           2 KVKVGVNG-YGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYR---AKEL---------------GIPVYAASEEFIPRF   62 (172)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHH---HHHT---------------TCCEEESSGGGHHHH
T ss_pred             cEEEEEEC-CCHHHHHHHHHHHhCCCceEEEEecCCChHHHHH---hhhc---------------Cceeecccccceeee
Confidence            46899999 7999999999998875 67777653 33221111   1111               11122211       


Q ss_pred             ----CCChhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEcc
Q 016901          151 ----LEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (380)
Q Consensus       151 ----l~d~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS  212 (380)
                          +.....+..++.++|+||-|.|...                +..-++.-.++|++ .|++|.
T Consensus        63 ~~~~~~~~~~~~~~~~~vDvViEcTG~f~----------------~~~~~~~hl~~G~k-~Vi~s~  111 (172)
T d2czca2          63 EKEGFEVAGTLNDLLEKVDIIVDATPGGI----------------GAKNKPLYEKAGVK-AIFQGG  111 (172)
T ss_dssp             HHHTCCCSCBHHHHHTTCSEEEECCSTTH----------------HHHHHHHHHHHTCE-EEECTT
T ss_pred             cccCccccchhhhhhccCCEEEECCCCCC----------------CHHHHHHHHHcCCC-EEEECC
Confidence                2223456667789999999998642                22233444567874 555665

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=95.10  E-value=0.049  Score=40.70  Aligned_cols=35  Identities=14%  Similarity=0.228  Sum_probs=31.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCc
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV  114 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~  114 (380)
                      ..++|+|.| .|++|-.++..|.+.|.+|+++.|..
T Consensus        21 ~p~~v~IiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          21 ESKKIGIVG-SGYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CCCEEEEEC-CchHHHHHHHHHHhccccceeeehhc
Confidence            357899999 89999999999999999999999854

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=95.09  E-value=0.067  Score=39.95  Aligned_cols=35  Identities=20%  Similarity=0.059  Sum_probs=31.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCc
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV  114 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~  114 (380)
                      .+++++|.| +|+||-.++..|.+.|.+|+++.|..
T Consensus        21 ~p~~i~IiG-~G~ig~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          21 VPGKLGVIG-AGVIGLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCCeEEEEC-CChHHHHHHHHHHHcCCceEEEEeec
Confidence            457899999 89999999999999999999999865

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=95.02  E-value=0.035  Score=45.31  Aligned_cols=70  Identities=13%  Similarity=0.042  Sum_probs=51.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      ..++++.|.| .|.||+.+++.|..-|.+|+..+|..........                   .       .+....++
T Consensus        42 l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~-------------------~-------~~~~~~~l   94 (188)
T d2naca1          42 LEAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKE-------------------L-------NLTWHATR   94 (188)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHH-------------------H-------TCEECSSH
T ss_pred             ccccceeecc-ccccchhhhhhhhccCceEEEEeecccccccccc-------------------c-------cccccCCH
Confidence            3678999999 9999999999999889999999986533222111                   0       11224667


Q ss_pred             HHHhcCCCEEEEccccC
Q 016901          158 EPALGNASVVICCIGAS  174 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag~~  174 (380)
                      .++++.+|+|+.+....
T Consensus        95 ~~~l~~sD~v~~~~plt  111 (188)
T d2naca1          95 EDMYPVCDVVTLNCPLH  111 (188)
T ss_dssp             HHHGGGCSEEEECSCCC
T ss_pred             HHHHHhccchhhccccc
Confidence            88899999998776543

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=95.02  E-value=0.022  Score=46.19  Aligned_cols=32  Identities=19%  Similarity=0.341  Sum_probs=27.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCC
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRS  113 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G-~~V~~l~R~  113 (380)
                      -+|.|-| .|.||+.+++.|.+++ .+|+++...
T Consensus         2 IKVaING-fGRIGR~v~Ral~~~~dievVaInd~   34 (178)
T d1b7go1           2 VNVAVNG-YGTIGKRVADAIIKQPDMKLVGVAKT   34 (178)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEECS
T ss_pred             eEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEECC
Confidence            3699998 8999999999999875 788887653

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=95.02  E-value=0.017  Score=48.68  Aligned_cols=36  Identities=22%  Similarity=0.380  Sum_probs=32.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCc
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV  114 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~  114 (380)
                      ...++|+|.| .|..|...+..|.++|++|.++.|+.
T Consensus         4 ~~~~kVvVIG-aGiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           4 HSQKRVVVLG-SGVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             CCSCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCCCcEEEEC-ccHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            3557899999 89999999999999999999999854

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=94.93  E-value=0.022  Score=43.04  Aligned_cols=36  Identities=14%  Similarity=0.175  Sum_probs=32.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCch
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ  115 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~  115 (380)
                      ..++++|.| .|++|..++..|.++|.+|+++.|.+.
T Consensus        29 ~~~~vvIIG-gG~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          29 PQSRLLIVG-GGVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             cCCeEEEEC-cchhHHHHHHHhhcccceEEEEeeccc
Confidence            347899999 899999999999999999999998763

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.85  E-value=0.054  Score=40.73  Aligned_cols=34  Identities=18%  Similarity=0.131  Sum_probs=31.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCc
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV  114 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~  114 (380)
                      .++++|.| +|+||..++..|.+.|.+|.++.|++
T Consensus        23 p~~~vIiG-~G~ig~E~A~~l~~lG~~Vtii~~~~   56 (122)
T d1v59a2          23 PKRLTIIG-GGIIGLEMGSVYSRLGSKVTVVEFQP   56 (122)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCeEEEEC-CCchHHHHHHHHHhhCcceeEEEecc
Confidence            46899999 89999999999999999999998865

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=94.82  E-value=0.037  Score=45.35  Aligned_cols=70  Identities=7%  Similarity=0.032  Sum_probs=50.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      ..++++.|.| .|.||+.+++.|..-|.+|+..++..........                   .       .....+++
T Consensus        45 l~g~tvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~-------------------~-------~~~~~~~l   97 (191)
T d1gdha1          45 LDNKTLGIYG-FGSIGQALAKRAQGFDMDIDYFDTHRASSSDEAS-------------------Y-------QATFHDSL   97 (191)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHH-------------------H-------TCEECSSH
T ss_pred             ecccceEEee-cccchHHHHHHHHhhccccccccccccccchhhc-------------------c-------cccccCCH
Confidence            3678999999 9999999999999899999999876543222111                   0       11113568


Q ss_pred             HHHhcCCCEEEEccccC
Q 016901          158 EPALGNASVVICCIGAS  174 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag~~  174 (380)
                      ++++..+|+|+.+....
T Consensus        98 ~~ll~~sD~v~l~~plt  114 (191)
T d1gdha1          98 DSLLSVSQFFSLNAPST  114 (191)
T ss_dssp             HHHHHHCSEEEECCCCC
T ss_pred             HHHHhhCCeEEecCCCC
Confidence            88999999998776543

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.73  E-value=0.059  Score=41.42  Aligned_cols=72  Identities=24%  Similarity=0.228  Sum_probs=46.3

Q ss_pred             eEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 016901           82 LAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (380)
Q Consensus        82 ~vlVtGatG~iG~~lv~~Ll~~-G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a  160 (380)
                      +|.|.|++|..|+.+++.+.+. ++++.+.....+.......                   .+.. +..|++.|+.+.+.
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~~~~~~~-------------------~~~D-vvIDFS~p~~~~~~   60 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLTD-------------------GNTE-VVIDFTHPDVVMGN   60 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCCTHHHHT-------------------TTCS-EEEECCCTTTHHHH
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCchhhhcc-------------------ccCC-EEEEcccHHHHHHH
Confidence            5899999999999999988775 5787665433222222110                   1222 35688888776655


Q ss_pred             h-----cCCCEEEEcccc
Q 016901          161 L-----GNASVVICCIGA  173 (380)
Q Consensus       161 ~-----~~~d~Vi~~Ag~  173 (380)
                      +     .++-.|+-+.|.
T Consensus        61 ~~~~~~~~~~~ViGTTG~   78 (135)
T d1yl7a1          61 LEFLIDNGIHAVVGTTGF   78 (135)
T ss_dssp             HHHHHHTTCEEEECCCCC
T ss_pred             HHHHHhcCCCEEEecccc
Confidence            4     357777755553

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=94.70  E-value=0.028  Score=42.48  Aligned_cols=35  Identities=23%  Similarity=0.218  Sum_probs=31.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCc
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV  114 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~  114 (380)
                      ..++|+|.| .|++|..++..|.+.|.+|+++.|.+
T Consensus        29 ~~k~vvViG-gG~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          29 EVNNVVVIG-SGYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             TCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCCEEEEEC-ChHHHHHHHHHhhccceEEEEEEecC
Confidence            457899998 89999999999999999999998865

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.68  E-value=0.068  Score=40.17  Aligned_cols=34  Identities=26%  Similarity=0.316  Sum_probs=30.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCc
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV  114 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~  114 (380)
                      +++++|.| .|+||..++..|.+.|.+|+++.|+.
T Consensus        20 P~~vvIIG-gG~iG~E~A~~l~~lG~~Vtii~~~~   53 (122)
T d1h6va2          20 PGKTLVVG-ASYVALECAGFLAGIGLDVTVMVRSI   53 (122)
T ss_dssp             CCSEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             CCeEEEEC-CCccHHHHHHHHhhcCCeEEEEEech
Confidence            46799999 89999999999999999999998863

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.66  E-value=0.064  Score=40.44  Aligned_cols=34  Identities=18%  Similarity=0.239  Sum_probs=31.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCc
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV  114 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~  114 (380)
                      .++++|.| .|+||..++..|.+.|.+|+++.|+.
T Consensus        22 pk~vvIvG-gG~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVG-AGYIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEEc-CCccHHHHHHHHhcCCcEEEEEeecc
Confidence            46899999 89999999999999999999999964

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.64  E-value=0.06  Score=43.70  Aligned_cols=68  Identities=18%  Similarity=0.157  Sum_probs=51.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      ..++++.|.| .|.||+.+++.|..-|.+|++.++...+.....                    ..+.        ..++
T Consensus        42 l~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~~--------------------~~~~--------~~~l   92 (184)
T d1ygya1          42 IFGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQ--------------------LGIE--------LLSL   92 (184)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCHHHHHH--------------------HTCE--------ECCH
T ss_pred             ccceeeeecc-ccchhHHHHHHhhhccceEEeecCCCChhHHhh--------------------cCce--------eccH
Confidence            3678899999 899999999999888999999988765433221                    1121        2457


Q ss_pred             HHHhcCCCEEEEccccC
Q 016901          158 EPALGNASVVICCIGAS  174 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag~~  174 (380)
                      +++++.+|+|+.+....
T Consensus        93 ~ell~~sDiv~~~~Plt  109 (184)
T d1ygya1          93 DDLLARADFISVHLPKT  109 (184)
T ss_dssp             HHHHHHCSEEEECCCCS
T ss_pred             HHHHhhCCEEEEcCCCC
Confidence            88899999998877544

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=94.63  E-value=0.052  Score=43.20  Aligned_cols=36  Identities=31%  Similarity=0.204  Sum_probs=32.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS  113 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~  113 (380)
                      ..+|+|+|.|-+.-+|+-++..|.++|++|+.+...
T Consensus        35 l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~   70 (166)
T d1b0aa1          35 TFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRF   70 (166)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSS
T ss_pred             cccceEEEEeccccccHHHHHHHHHhhccccccccc
Confidence            478999999999999999999999999999887544

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=94.59  E-value=0.097  Score=41.61  Aligned_cols=42  Identities=24%  Similarity=0.151  Sum_probs=33.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLV  121 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G-~~V~~l~R~~~~~~~~~  121 (380)
                      .+.+|+|.|+ |.+|...+..+...| .+|+++++++++.+...
T Consensus        28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~   70 (175)
T d1cdoa2          28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK   70 (175)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH
T ss_pred             CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHH
Confidence            5678999995 668888888888877 57888999988876554

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.34  E-value=0.089  Score=42.01  Aligned_cols=38  Identities=21%  Similarity=0.088  Sum_probs=33.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCch
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ  115 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~  115 (380)
                      ..+++|+|.|-+.-+|+-++..|+++|.+|+.+.....
T Consensus        37 l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~   74 (170)
T d1a4ia1          37 IAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTA   74 (170)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS
T ss_pred             cccceEEEEecCCccchHHHHHHHhccCceEEEecccc
Confidence            47899999999999999999999999999998766543

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=94.25  E-value=0.51  Score=33.04  Aligned_cols=69  Identities=10%  Similarity=0.007  Sum_probs=45.4

Q ss_pred             CeEEEEcCCChHH-HHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           81 NLAFVAGATGKVG-SRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        81 ~~vlVtGatG~iG-~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      |+|-+.|-. ++| +.|++.|+++|+.|.+.++..+..-+   .++.               .++.+..+.  +++.   
T Consensus         2 ~~ihfiGIg-G~GMs~LA~~L~~~G~~VsGSD~~~~~~t~---~L~~---------------~Gi~i~~gh--~~~~---   57 (89)
T d1j6ua1           2 MKIHFVGIG-GIGMSAVALHEFSNGNDVYGSNIEETERTA---YLRK---------------LGIPIFVPH--SADN---   57 (89)
T ss_dssp             CEEEEETTT-SHHHHHHHHHHHHTTCEEEEECSSCCHHHH---HHHH---------------TTCCEESSC--CTTS---
T ss_pred             cEEEEEeEC-HHHHHHHHHHHHhCCCeEEEEeCCCChhHH---HHHH---------------CCCeEEeee--cccc---
Confidence            678888844 455 47889999999999999988643222   2333               345554432  2222   


Q ss_pred             HhcCCCEEEEccccC
Q 016901          160 ALGNASVVICCIGAS  174 (380)
Q Consensus       160 a~~~~d~Vi~~Ag~~  174 (380)
                       +.++|.||...+..
T Consensus        58 -i~~~d~vV~SsAI~   71 (89)
T d1j6ua1          58 -WYDPDLVIKTPAVR   71 (89)
T ss_dssp             -CCCCSEEEECTTCC
T ss_pred             -cCCCCEEEEecCcC
Confidence             35789999987764

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.21  E-value=0.062  Score=51.11  Aligned_cols=109  Identities=14%  Similarity=0.127  Sum_probs=68.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCc-------------------hhHHHHHHHHHhhhhcccccccCC
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKGI  138 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~  138 (380)
                      ...+|+|.|+ |.+|..+++.|+..|. ++++++.+.                   .+++...+.+..++          
T Consensus        24 ~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d~v~~sdL~rqf~~~~~diGk~ka~~~~~~L~~lN----------   92 (529)
T d1yova1          24 ESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELN----------   92 (529)
T ss_dssp             HHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCSBCCHHHHHHCTTCCGGGTTSBHHHHHHHHHHTTC----------
T ss_pred             hCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCCcCChhhcCchhcCChhhCCCHHHHHHHHHHHHhC----------
Confidence            4468999995 8899999999999995 677776533                   13333333333322          


Q ss_pred             CCCCceEEEEcCCCCh-hcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCC
Q 016901          139 QPVEMLELVECDLEKR-VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT  215 (380)
Q Consensus       139 ~~~~~v~~~~~Dl~d~-~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~  215 (380)
                       +.-+++++..++.+. +...+.+.++|+||.+..               |......+-++|.+.++ .+|+..+.|.
T Consensus        93 -p~v~i~~~~~~~~~~~~~~~~~~~~~dvVv~~~~---------------~~~~~~~l~~~c~~~~i-p~i~~~~~G~  153 (529)
T d1yova1          93 -SDVSGSFVEESPENLLDNDPSFFCRFTVVVATQL---------------PESTSLRLADVLWNSQI-PLLICRTYGL  153 (529)
T ss_dssp             -TTSBCCEESSCHHHHHHSCGGGGGGCSEEEEESC---------------CHHHHHHHHHHHHHHTC-CEEEEEEETT
T ss_pred             -CCCcEEEEcCCchhhhhhHHHHhcCCCEEEECCC---------------CHHHHHHHHHHHHHcCC-CEEEEeccCC
Confidence             112344454443321 122345678999998742               33445567788888886 4777777654

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=94.17  E-value=0.11  Score=41.04  Aligned_cols=70  Identities=20%  Similarity=0.302  Sum_probs=54.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      +..+|+++|.| =|.+|+.++++|...|.+|++.-.+|-++  ++..+                 .+.+        ...
T Consensus        20 ~laGk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~DPi~a--lqA~m-----------------dGf~--------v~~   71 (163)
T d1v8ba1          20 LISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPICA--IQAVM-----------------EGFN--------VVT   71 (163)
T ss_dssp             CCTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHH--HHHHT-----------------TTCE--------ECC
T ss_pred             eecCCEEEEec-ccccchhHHHHHHhCCCEEEEEecCchhh--HHHHh-----------------cCCc--------cCc
Confidence            45789999999 99999999999999999999999988543  22211                 2333        244


Q ss_pred             HHHHhcCCCEEEEccccC
Q 016901          157 IEPALGNASVVICCIGAS  174 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag~~  174 (380)
                      ++++++..|++|-+.|..
T Consensus        72 ~~~a~~~aDi~vTaTGn~   89 (163)
T d1v8ba1          72 LDEIVDKGDFFITCTGNV   89 (163)
T ss_dssp             HHHHTTTCSEEEECCSSS
T ss_pred             hhHccccCcEEEEcCCCC
Confidence            678899999999988753

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=94.09  E-value=0.63  Score=33.00  Aligned_cols=72  Identities=18%  Similarity=0.183  Sum_probs=48.6

Q ss_pred             CCCCCeEEEEcCCChHH-HHHHHHHHHCCCeEEEEeCCchhH-HHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCCh
Q 016901           77 SKDDNLAFVAGATGKVG-SRTVRELLKLGFRVRAGVRSVQRA-ENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG-~~lv~~Ll~~G~~V~~l~R~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~  154 (380)
                      +...++|.+.|- |++| +.|++.|+++|++|.+.++..+.. +.+.+                   .++.+..++-  +
T Consensus         5 ~~~~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~~-------------------~Gi~v~~g~~--~   62 (96)
T d1p3da1           5 MRRVQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQ-------------------AGAKIYIGHA--E   62 (96)
T ss_dssp             CTTCCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHH-------------------TTCEEEESCC--G
T ss_pred             chhCCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHH-------------------CCCeEEECCc--c
Confidence            346688999984 4455 678999999999999999875433 22221                   3465555443  2


Q ss_pred             hcHHHHhcCCCEEEEccccC
Q 016901          155 VQIEPALGNASVVICCIGAS  174 (380)
Q Consensus       155 ~~~~~a~~~~d~Vi~~Ag~~  174 (380)
                      +    -+.++|.||...+..
T Consensus        63 ~----~i~~~d~vV~S~AI~   78 (96)
T d1p3da1          63 E----HIEGASVVVVSSAIK   78 (96)
T ss_dssp             G----GGTTCSEEEECTTSC
T ss_pred             c----cCCCCCEEEECCCcC
Confidence            2    235789999987754

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.07  E-value=0.03  Score=44.97  Aligned_cols=118  Identities=9%  Similarity=-0.044  Sum_probs=63.3

Q ss_pred             CeEEEEcC-CChHHHHHHHHHHHCC----CeEEEEeCCchh--HHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCC
Q 016901           81 NLAFVAGA-TGKVGSRTVRELLKLG----FRVRAGVRSVQR--AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK  153 (380)
Q Consensus        81 ~~vlVtGa-tG~iG~~lv~~Ll~~G----~~V~~l~R~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d  153 (380)
                      ++|.|.|| +.+.+..++..++...    -++.+++.++++  .+.+..........     .+    ....+.     .
T Consensus         2 ~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~-----~~----~~~~~~-----~   67 (169)
T d1s6ya1           2 LKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEK-----AG----VPIEIH-----L   67 (169)
T ss_dssp             EEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHH-----TT----CCCEEE-----E
T ss_pred             cEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHh-----cC----CCceee-----e
Confidence            57999996 3345555555444432    378888887754  33222111111000     00    111111     1


Q ss_pred             hhcHHHHhcCCCEEEEccccCccccCCC------------CCc--------chhhHHHHHHHHHHHHHcCCCEEEEEcc
Q 016901          154 RVQIEPALGNASVVICCIGASEKEVFDI------------TGP--------YRIDFQATKNLVDAATIAKVNHFIMVSS  212 (380)
Q Consensus       154 ~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~------------~~~--------~~~nv~g~~~ll~a~~~~~v~r~V~~SS  212 (380)
                      ..+..++++++|+||.+|+.........            .+.        ..-|+.-.+.+++.+++....-++++-|
T Consensus        68 ~td~~~al~gaDvVv~ta~~~~~~~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~~~pda~~i~vt  146 (169)
T d1s6ya1          68 TLDRRRALDGADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFT  146 (169)
T ss_dssp             ESCHHHHHTTCSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             cCCchhhcCCCCEEEEccccCCCCCeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhhcCCCeEEEEeC
Confidence            2345678899999999998653211100            000        1236666777888888887765655544

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.05  E-value=0.024  Score=44.45  Aligned_cols=35  Identities=20%  Similarity=0.350  Sum_probs=31.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS  113 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~  113 (380)
                      .++++|||.|| |.+|..-++.|++.|.+|++++..
T Consensus        11 l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1          11 LKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             CTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             eCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            47899999995 999999999999999999998654

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=93.91  E-value=0.035  Score=41.78  Aligned_cols=35  Identities=23%  Similarity=0.354  Sum_probs=31.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCch
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ  115 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~  115 (380)
                      .++++|.| .|++|-.++..|.+.|++|+++.|++.
T Consensus        32 ~~~vvIiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~~   66 (122)
T d1xhca2          32 SGEAIIIG-GGFIGLELAGNLAEAGYHVKLIHRGAM   66 (122)
T ss_dssp             HSEEEEEE-CSHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred             CCcEEEEC-CcHHHHHHHHHhhcccceEEEEecccc
Confidence            36799999 899999999999999999999998653

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=93.91  E-value=0.043  Score=41.99  Aligned_cols=35  Identities=23%  Similarity=0.257  Sum_probs=31.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCc
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV  114 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~  114 (380)
                      ..++|+|.| +|++|..++..|.+.|.+|.++.+.+
T Consensus        34 ~~k~v~VIG-gG~iG~E~A~~l~~~g~~Vtvie~~~   68 (133)
T d1q1ra2          34 ADNRLVVIG-GGYIGLEVAATAIKANMHVTLLDTAA   68 (133)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cCCEEEEEC-CchHHHHHHHHHHhhCcceeeeeecc
Confidence            457899999 89999999999999999999999865

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=93.79  E-value=0.07  Score=43.41  Aligned_cols=66  Identities=14%  Similarity=0.025  Sum_probs=49.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      ..+++|.|.| .|.||+.+++.|..-|.+|+..++......                       ...       ...+++
T Consensus        42 l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~-----------------------~~~-------~~~~~l   90 (188)
T d1sc6a1          42 ARGKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIENKLPL-----------------------GNA-------TQVQHL   90 (188)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCCCC-----------------------TTC-------EECSCH
T ss_pred             ccceEEEEee-cccchhhhhhhcccccceEeeccccccchh-----------------------hhh-------hhhhhH
Confidence            3678999998 999999999999999999999987643210                       011       112468


Q ss_pred             HHHhcCCCEEEEccccC
Q 016901          158 EPALGNASVVICCIGAS  174 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag~~  174 (380)
                      ++++..+|+|+.++...
T Consensus        91 ~ell~~sDii~i~~plt  107 (188)
T d1sc6a1          91 SDLLNMSDVVSLHVPEN  107 (188)
T ss_dssp             HHHHHHCSEEEECCCSS
T ss_pred             HHHHhhccceeecccCC
Confidence            88899999998887644

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=93.76  E-value=0.04  Score=45.42  Aligned_cols=66  Identities=17%  Similarity=0.194  Sum_probs=49.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      ..+++|.|.| .|-||+.+++.|..-|.+|++.++.......                      ..+        +..++
T Consensus        43 l~~ktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~----------------------~~~--------~~~~l   91 (199)
T d1dxya1          43 LGQQTVGVMG-TGHIGQVAIKLFKGFGAKVIAYDPYPMKGDH----------------------PDF--------DYVSL   91 (199)
T ss_dssp             GGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCSSCC----------------------TTC--------EECCH
T ss_pred             ccceeeeeee-cccccccccccccccceeeeccCCccchhhh----------------------cch--------hHHHH
Confidence            3678999999 9999999999999999999999886532100                      111        12457


Q ss_pred             HHHhcCCCEEEEccccC
Q 016901          158 EPALGNASVVICCIGAS  174 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag~~  174 (380)
                      ++++..+|+|+.+....
T Consensus        92 ~~l~~~~D~v~~~~plt  108 (199)
T d1dxya1          92 EDLFKQSDVIDLHVPGI  108 (199)
T ss_dssp             HHHHHHCSEEEECCCCC
T ss_pred             HHHHHhcccceeeeccc
Confidence            78888899888876543

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=93.75  E-value=0.081  Score=42.36  Aligned_cols=32  Identities=19%  Similarity=0.304  Sum_probs=26.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeC
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVR  112 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G-~~V~~l~R  112 (380)
                      |++|.|-| -|.||+.+++.|++++ .+|+++..
T Consensus         1 M~~VgING-fGRIGR~v~R~l~~~~di~vvaInd   33 (171)
T d1cf2o1           1 MKAVAING-YGTVGKRVADAIAQQDDMKVIGVSK   33 (171)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTSSSEEEEEEEE
T ss_pred             CeEEEEEc-CcHHHHHHHHHHHhCCCceEEEEec
Confidence            46899998 8999999999998886 67777654

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=93.56  E-value=0.22  Score=39.01  Aligned_cols=98  Identities=12%  Similarity=0.141  Sum_probs=60.8

Q ss_pred             CeEEEEcCCChHHHH-HHHHHHHC-CCeEEEE-eCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           81 NLAFVAGATGKVGSR-TVRELLKL-GFRVRAG-VRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        81 ~~vlVtGatG~iG~~-lv~~Ll~~-G~~V~~l-~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      ++|.|.| +|.+|.. .+..|... +.+++++ ++++++.....+..                  ++     +.  .+.+
T Consensus         2 iri~iIG-~G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~------------------~~-----~~--~~~~   55 (164)
T d1tlta1           2 LRIGVVG-LGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESW------------------RI-----PY--ADSL   55 (164)
T ss_dssp             EEEEEEC-CSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHH------------------TC-----CB--CSSH
T ss_pred             CEEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhcc------------------cc-----cc--cccc
Confidence            5799999 7999975 45556554 5777665 57777666554321                  11     11  2335


Q ss_pred             HHHhcCCCEEEEccccCccc-----------cCCCCCcchhhHHHHHHHHHHHHHcCC
Q 016901          158 EPALGNASVVICCIGASEKE-----------VFDITGPYRIDFQATKNLVDAATIAKV  204 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag~~~~~-----------~~~~~~~~~~nv~g~~~ll~a~~~~~v  204 (380)
                      ++++.++|+|+-+.....+.           .---+.++..|+.-...+++++++.++
T Consensus        56 ~~l~~~~D~V~I~tp~~~h~~~~~~al~~gk~V~~EKPla~~~~e~~~l~~~a~~~~~  113 (164)
T d1tlta1          56 SSLAASCDAVFVHSSTASHFDVVSTLLNAGVHVCVDKPLAENLRDAERLVELAARKKL  113 (164)
T ss_dssp             HHHHTTCSEEEECSCTTHHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTC
T ss_pred             hhhhhhcccccccccchhccccccccccccceeeccccccCCHHHHHHHHHHHHHcCC
Confidence            56667899998776432110           001234456678888889999988875

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.30  E-value=0.095  Score=41.89  Aligned_cols=82  Identities=15%  Similarity=0.063  Sum_probs=52.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCC--CCh
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDL--EKR  154 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl--~d~  154 (380)
                      ...+|+|+|.|-+.-+|+-++..|+++|.+|+.+..+......                .. ....-......|+  ...
T Consensus        26 ~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~----------------~~-~~~~~~~~~~~~~~~~~~   88 (171)
T d1edza1          26 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFT----------------RG-ESLKLNKHHVEDLGEYSE   88 (171)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEE----------------SC-CCSSCCCCEEEEEEECCH
T ss_pred             CCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccccccccc----------------cc-cceeeeeeccccccccch
Confidence            3478999999999999999999999999999877654311000                00 0000001111222  124


Q ss_pred             hcHHHHhcCCCEEEEccccCc
Q 016901          155 VQIEPALGNASVVICCIGASE  175 (380)
Q Consensus       155 ~~~~~a~~~~d~Vi~~Ag~~~  175 (380)
                      +.+++....+|+||..+|...
T Consensus        89 ~~lk~~~~~aDIvIsavG~p~  109 (171)
T d1edza1          89 DLLKKCSLDSDVVITGVPSEN  109 (171)
T ss_dssp             HHHHHHHHHCSEEEECCCCTT
T ss_pred             hHHhhccccCCEEEEccCCCc
Confidence            557777888999999988654

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=93.24  E-value=0.11  Score=40.48  Aligned_cols=33  Identities=30%  Similarity=0.335  Sum_probs=28.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHC--CCeEEEEeC
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKL--GFRVRAGVR  112 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~--G~~V~~l~R  112 (380)
                      |++|.|.|+||-||...++-+.+.  .++|.+++=
T Consensus         1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa   35 (151)
T d1q0qa2           1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVA   35 (151)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEE
T ss_pred             CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEe
Confidence            468999999999999999988876  378888764

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=93.14  E-value=0.066  Score=43.26  Aligned_cols=35  Identities=17%  Similarity=0.078  Sum_probs=32.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCc
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV  114 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~  114 (380)
                      ++++|+|.| +|..|...+..|.++||+|+++.+.+
T Consensus        42 ~~k~V~IIG-aGPAGL~AA~~la~~G~~Vtl~E~~~   76 (179)
T d1ps9a3          42 QKKNLAVVG-AGPAGLAFAINAAARGHQVTLFDAHS   76 (179)
T ss_dssp             SCCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCcEEEEEC-ccHHHHHHHHHHHhhccceEEEeccC
Confidence            568999999 89999999999999999999999865

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=93.10  E-value=0.059  Score=45.46  Aligned_cols=36  Identities=25%  Similarity=0.156  Sum_probs=32.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCch
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ  115 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~  115 (380)
                      ..++|+|.| .|..|..++..|+++|++|+++.|++.
T Consensus         3 ~~~kV~IiG-aG~aGl~~A~~L~~~G~~v~v~Er~~~   38 (265)
T d2voua1           3 TTDRIAVVG-GSISGLTAALMLRDAGVDVDVYERSPQ   38 (265)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCCcEEEEC-cCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            456899999 899999999999999999999998653

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=93.07  E-value=0.11  Score=43.35  Aligned_cols=104  Identities=14%  Similarity=0.116  Sum_probs=63.5

Q ss_pred             CCeEEEEcCCChHHH-HHHHHHHHC-CCeEEE-EeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           80 DNLAFVAGATGKVGS-RTVRELLKL-GFRVRA-GVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        80 ~~~vlVtGatG~iG~-~lv~~Ll~~-G~~V~~-l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      .-+|.|.| +|.+|+ +++..+... +.+|++ ++|++++.+...+.   ++++.          ..+.    .   ..+
T Consensus        33 ~iriaiIG-~G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~---~~i~~----------~~~~----~---~~d   91 (221)
T d1h6da1          33 RFGYAIVG-LGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAE---YGVDP----------RKIY----D---YSN   91 (221)
T ss_dssp             CEEEEEEC-CSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHH---TTCCG----------GGEE----C---SSS
T ss_pred             CEEEEEEc-CcHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHh---hcccc----------cccc----c---cCc
Confidence            34899999 799996 566666554 677775 46777776665432   22110          1111    1   133


Q ss_pred             HHHHhc--CCCEEEEccccCccc-----------cCCCCCcchhhHHHHHHHHHHHHHcCC
Q 016901          157 IEPALG--NASVVICCIGASEKE-----------VFDITGPYRIDFQATKNLVDAATIAKV  204 (380)
Q Consensus       157 ~~~a~~--~~d~Vi~~Ag~~~~~-----------~~~~~~~~~~nv~g~~~ll~a~~~~~v  204 (380)
                      ++++++  ++|+|+-+.....+.           ..--+.++..|+.....+++++++.++
T Consensus        92 ~~ell~~~~iD~V~I~tp~~~H~~~~~~al~~gk~v~~EKPla~~~~e~~~l~~~a~~~~~  152 (221)
T d1h6da1          92 FDKIAKDPKIDAVYIILPNSLHAEFAIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAANK  152 (221)
T ss_dssp             GGGGGGCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEECSSCCSSHHHHHHHHHHHHHHTC
T ss_pred             hhhhcccccceeeeeccchhhhhhHHHHhhhcchhhhcCCCccCCHHHHHHHHHHHHhcCC
Confidence            555564  589998876543110           011244566788889999999998876

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=92.87  E-value=0.16  Score=39.57  Aligned_cols=34  Identities=26%  Similarity=0.312  Sum_probs=28.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHC--CCeEEEEeCC
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKL--GFRVRAGVRS  113 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~--G~~V~~l~R~  113 (380)
                      +|+|.|.|+||-||...++-+.+.  .++|.+++=+
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~   37 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTAN   37 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEES
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeC
Confidence            478999999999999999988776  4888887643

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=92.86  E-value=0.099  Score=38.84  Aligned_cols=35  Identities=20%  Similarity=0.063  Sum_probs=31.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCc
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV  114 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~  114 (380)
                      .+++|+|.| +|++|..++..|.+.|.+|.++.|.+
T Consensus        21 ~~~~vvVvG-gG~ig~E~A~~l~~~g~~vt~i~~~~   55 (121)
T d1mo9a2          21 PGSTVVVVG-GSKTAVEYGCFFNATGRRTVMLVRTE   55 (121)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhcchhheEeeccc
Confidence            357899999 89999999999999999999999865

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=92.66  E-value=0.33  Score=38.06  Aligned_cols=100  Identities=13%  Similarity=0.105  Sum_probs=61.1

Q ss_pred             CeEEEEcCCChHHHH-HHHHHHHC-CCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           81 NLAFVAGATGKVGSR-TVRELLKL-GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        81 ~~vlVtGatG~iG~~-lv~~Ll~~-G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ++|.|.| +|.+|.. .+..|.+. +.+++++++++++...+.+...                  +..+..|+      +
T Consensus         2 irvgiiG-~G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~------------------~~~~~~~~------~   56 (167)
T d1xeaa1           2 LKIAMIG-LGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYR------------------VSATCTDY------R   56 (167)
T ss_dssp             EEEEEEC-CCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTT------------------CCCCCSST------T
T ss_pred             eEEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhcc------------------cccccccH------H
Confidence            5799999 7888865 45566555 4677777888877766554211                  11111222      2


Q ss_pred             HHh-cCCCEEEEccccCccc-----------cCCCCCcchhhHHHHHHHHHHHHHcCCC
Q 016901          159 PAL-GNASVVICCIGASEKE-----------VFDITGPYRIDFQATKNLVDAATIAKVN  205 (380)
Q Consensus       159 ~a~-~~~d~Vi~~Ag~~~~~-----------~~~~~~~~~~nv~g~~~ll~a~~~~~v~  205 (380)
                      +++ .++|+|+-+.....+.           .---+.++..|..-...+++++++.++.
T Consensus        57 ~ll~~~iD~V~I~tp~~~H~~~~~~al~~gk~V~~EKP~~~~~~e~~~l~~~a~~~~~~  115 (167)
T d1xeaa1          57 DVLQYGVDAVMIHAATDVHSTLAAFFLHLGIPTFVDKPLAASAQECENLYELAEKHHQP  115 (167)
T ss_dssp             GGGGGCCSEEEECSCGGGHHHHHHHHHHTTCCEEEESCSCSSHHHHHHHHHHHHHTTCC
T ss_pred             HhcccccceecccccccccccccccccccccccccCCCCcCCHHHHHHHHHHHHHcCCE
Confidence            233 3689988775432110           0012344667888899999999998864

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=92.66  E-value=0.054  Score=40.81  Aligned_cols=36  Identities=17%  Similarity=0.101  Sum_probs=32.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCch
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ  115 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~  115 (380)
                      .+++++|.| .|+||-.++..|.+.|.+|+++.|++.
T Consensus        24 ~p~~~viiG-~G~iglE~A~~~~~~G~~Vtvi~~~~~   59 (123)
T d1dxla2          24 IPKKLVVIG-AGYIGLEMGSVWGRIGSEVTVVEFASE   59 (123)
T ss_dssp             CCSEEEESC-CSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             cCCeEEEEc-cchHHHHHHHHHHhcCCeEEEEEEccc
Confidence            346899999 899999999999999999999998653

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=92.53  E-value=0.11  Score=43.58  Aligned_cols=44  Identities=18%  Similarity=0.136  Sum_probs=38.1

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHH
Q 016901           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLV  121 (380)
Q Consensus        77 ~~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~  121 (380)
                      ++.+++|+|-| -|-+|+++++.|.+.|.+|++.+.+........
T Consensus        36 ~l~g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~   79 (230)
T d1leha1          36 SLEGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAV   79 (230)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEeecccHHHHHHHH
Confidence            45789999999 999999999999999999999988877665543

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=92.32  E-value=0.06  Score=42.73  Aligned_cols=76  Identities=18%  Similarity=0.117  Sum_probs=47.2

Q ss_pred             CeEEEEcCCChHHHHHH-HHHHHC-----CCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCCh
Q 016901           81 NLAFVAGATGKVGSRTV-RELLKL-----GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv-~~Ll~~-----G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~  154 (380)
                      |+|.|.|| |.+|...+ ..|++.     +.++.+++.++++.....+..+....            ....+..     .
T Consensus         1 mKIaiIGa-Gs~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~------------~~~~~~~-----t   62 (162)
T d1up7a1           1 MRIAVIGG-GSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVK------------DRFKVLI-----S   62 (162)
T ss_dssp             CEEEEETT-TCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHT------------TSSEEEE-----C
T ss_pred             CEEEEECC-CHHHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhc------------cCceEEE-----e
Confidence            57999997 44565544 333321     35899999999887655444333211            1222222     1


Q ss_pred             hcHHHHhcCCCEEEEccccC
Q 016901          155 VQIEPALGNASVVICCIGAS  174 (380)
Q Consensus       155 ~~~~~a~~~~d~Vi~~Ag~~  174 (380)
                      .+..++++++|+||..||..
T Consensus        63 ~~~~~~l~~aDvVVita~~~   82 (162)
T d1up7a1          63 DTFEGAVVDAKYVIFQFRPG   82 (162)
T ss_dssp             SSHHHHHTTCSEEEECCCTT
T ss_pred             cCcccccCCCCEEEEecccC
Confidence            23467889999999999865

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=92.31  E-value=0.077  Score=40.07  Aligned_cols=35  Identities=17%  Similarity=0.104  Sum_probs=31.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCc
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV  114 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~  114 (380)
                      .+++++|.| .|+||..++..|.+.|.+|+++.|.+
T Consensus        25 ~p~~vvIiG-gG~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          25 VPGKLLIIG-GGIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CCSEEEEES-CSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             cCCeEEEEC-CCHHHHHHHHHhhcCCCEEEEEEeec
Confidence            346899999 89999999999999999999998855

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=92.18  E-value=0.074  Score=42.74  Aligned_cols=36  Identities=14%  Similarity=0.143  Sum_probs=31.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCch
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQ  115 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~  115 (380)
                      .+++|+|.| +|..|...+..|.++|+ +|+++.|+..
T Consensus         3 ~~~kVaIIG-aGpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           3 YSAKIALLG-AGPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GGCCEEEEC-CSHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCCEEEEEC-ChHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            357899999 89999999999999998 5999988653

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=92.15  E-value=0.064  Score=36.95  Aligned_cols=36  Identities=19%  Similarity=0.146  Sum_probs=31.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchh
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR  116 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~  116 (380)
                      +|+|.|.| +|.+|+-++..-.+-|++|++++-+++.
T Consensus         1 ~k~vgIlG-~GQLgrMl~~Aa~~LG~~v~vldp~~~~   36 (78)
T d3etja2           1 MKQVCVLG-NGQLGRMLRQAGEPLGIAVWPVGLDAEP   36 (78)
T ss_dssp             CEEEEEEB-CSHHHHHHHHHHGGGTEEEEEECTTSCG
T ss_pred             CCEEEEEc-CCHHHHHHHHHHHHcCCEEEEEcCCCCC
Confidence            36899999 8999999999999999999999876643

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=92.13  E-value=0.083  Score=46.58  Aligned_cols=34  Identities=21%  Similarity=0.251  Sum_probs=31.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCc
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV  114 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~  114 (380)
                      +|+|+|.| +|.-|..++..|.++|++|.++-++.
T Consensus         2 ~KKI~IIG-aG~sGL~aA~~L~k~G~~V~viEk~~   35 (314)
T d2bi7a1           2 SKKILIVG-AGFSGAVIGRQLAEKGHQVHIIDQRD   35 (314)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCEEEEEC-CcHHHHHHHHHHHhCCCCEEEEECCC
Confidence            57899999 89999999999999999999998765

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=91.97  E-value=0.34  Score=36.86  Aligned_cols=86  Identities=15%  Similarity=0.045  Sum_probs=55.3

Q ss_pred             CCCeEEEEcCC---ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh
Q 016901           79 DDNLAFVAGAT---GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (380)
Q Consensus        79 ~~~~vlVtGat---G~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~  155 (380)
                      +.++|.|.|||   +-.|..+++.|.+.|++++.+.-++..                         ..+   .+ ..-..
T Consensus        12 ~pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~~~~-------------------------~~i---~g-~~~~~   62 (136)
T d1iuka_          12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQG-------------------------EEL---FG-EEAVA   62 (136)
T ss_dssp             HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTT-------------------------SEE---TT-EECBS
T ss_pred             CCCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEecccc-------------------------cee---ec-eeccc
Confidence            45789999998   579999999999999999876443210                         011   11 11112


Q ss_pred             cHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEE
Q 016901          156 QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIM  209 (380)
Q Consensus       156 ~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~  209 (380)
                      ++.++-..+|.|+-+...                .....+++.|.+.|++.+++
T Consensus        63 ~l~~i~~~iD~v~v~~p~----------------~~v~~~v~~~~~~g~k~i~~  100 (136)
T d1iuka_          63 SLLDLKEPVDILDVFRPP----------------SALMDHLPEVLALRPGLVWL  100 (136)
T ss_dssp             SGGGCCSCCSEEEECSCH----------------HHHTTTHHHHHHHCCSCEEE
T ss_pred             chhhccCCCceEEEeccH----------------HHHHHHHHHHHhhCCCeEEE
Confidence            333333568988887632                23445777777888876654

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=91.96  E-value=0.48  Score=36.69  Aligned_cols=39  Identities=15%  Similarity=0.083  Sum_probs=31.9

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH
Q 016901           82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQ  122 (380)
Q Consensus        82 ~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~  122 (380)
                      +|-+.| .|.+|..++++|++.|+.| +..|+.++...+.+
T Consensus         2 kIg~IG-lG~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~   40 (156)
T d2cvza2           2 KVAFIG-LGAMGYPMAGHLARRFPTL-VWNRTFEKALRHQE   40 (156)
T ss_dssp             CEEEEC-CSTTHHHHHHHHHTTSCEE-EECSSTHHHHHHHH
T ss_pred             eEEEEe-HHHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHH
Confidence            588899 7999999999999998866 56888877666544

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=91.96  E-value=0.078  Score=45.10  Aligned_cols=34  Identities=21%  Similarity=0.131  Sum_probs=30.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCc
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV  114 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~  114 (380)
                      +|+|+|.| +|.-|...+.+|+++|++|.++-++.
T Consensus         1 ~KkV~IIG-aG~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIG-AGVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            47899999 89999999999999999999998754

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=91.87  E-value=0.39  Score=38.26  Aligned_cols=102  Identities=15%  Similarity=0.153  Sum_probs=64.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHC-CCeEEEE-eCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLKL-GFRVRAG-VRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~-G~~V~~l-~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      .+|.|.| +|.+|+..++.|... +.+|+++ ++++++...+.+   ++++.           ....+       .++++
T Consensus         2 iki~iIG-~G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~---~~~~~-----------~~~~~-------~~~~~   59 (184)
T d1ydwa1           2 IRIGVMG-CADIARKVSRAIHLAPNATISGVASRSLEKAKAFAT---ANNYP-----------ESTKI-------HGSYE   59 (184)
T ss_dssp             EEEEEES-CCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHH---HTTCC-----------TTCEE-------ESSHH
T ss_pred             eEEEEEc-CCHHHHHHHHHHHhCCCCEEEEEEeCCccccccchh---ccccc-----------cceee-------cCcHH
Confidence            4789999 789999999988776 5788764 677776655443   11111           11111       24466


Q ss_pred             HHh--cCCCEEEEccccCccc-----------cCCCCCcchhhHHHHHHHHHHHHHcCC
Q 016901          159 PAL--GNASVVICCIGASEKE-----------VFDITGPYRIDFQATKNLVDAATIAKV  204 (380)
Q Consensus       159 ~a~--~~~d~Vi~~Ag~~~~~-----------~~~~~~~~~~nv~g~~~ll~a~~~~~v  204 (380)
                      +++  .++|+|+-+.....+.           .---+.+...|+.-...+++.+++.++
T Consensus        60 ~ll~~~~iD~v~I~tp~~~h~~~~~~~l~~g~~v~~EKP~~~~~~e~~~l~~~~~~~~~  118 (184)
T d1ydwa1          60 SLLEDPEIDALYVPLPTSLHVEWAIKAAEKGKHILLEKPVAMNVTEFDKIVDACEANGV  118 (184)
T ss_dssp             HHHHCTTCCEEEECCCGGGHHHHHHHHHTTTCEEEECSSCSSSHHHHHHHHHHHHTTTC
T ss_pred             HhhhccccceeeecccchhhcchhhhhhhccceeecccccccCHHHHHHHHHHHHhhCC
Confidence            666  3589999775432110           001244566788889999999998876

>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Transcriptional repressor Rex, C-terminal domain
domain: Transcriptional repressor Rex, C-terminal domain
species: Thermus aquaticus [TaxId: 271]

Probab=91.82  E-value=0.13  Score=38.86  Aligned_cols=94  Identities=13%  Similarity=0.099  Sum_probs=60.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHH-CCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           81 NLAFVAGATGKVGSRTVRELLK-LGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~-~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      .+|+|.| +|.+|+.|++++.. .|++++++..+.....                  | ....++.++.     .+.+.+
T Consensus         4 ~~v~I~G-aG~~G~~l~~~l~~~~~~~iv~fiDdd~~k~------------------G-~~I~Gi~V~~-----~~~l~~   58 (126)
T d2dt5a2           4 WGLCIVG-MGRLGSALADYPGFGESFELRGFFDVDPEKV------------------G-RPVRGGVIEH-----VDLLPQ   58 (126)
T ss_dssp             EEEEEEC-CSHHHHHHHHCSCCCSSEEEEEEEESCTTTT------------------T-CEETTEEEEE-----GGGHHH
T ss_pred             ceEEEEc-CCHHHHHHHHhHhhcCCcEEEEEEeCchHhc------------------C-CEECCEEEec-----HHHHHH
Confidence            3799999 89999999988754 4789888765433211                  1 0113455543     344555


Q ss_pred             Hhc-CCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCC
Q 016901          160 ALG-NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT  215 (380)
Q Consensus       160 a~~-~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~  215 (380)
                      ... .++.++-+...                ...+.+++.|.+.|++.+..++....
T Consensus        59 ~~~~~i~iai~~i~~----------------~~~~~I~d~l~~~gIk~I~~f~~~~l   99 (126)
T d2dt5a2          59 RVPGRIEIALLTVPR----------------EAAQKAADLLVAAGIKGILNFAPVVL   99 (126)
T ss_dssp             HSTTTCCEEEECSCH----------------HHHHHHHHHHHHHTCCEEEECSSSCC
T ss_pred             HHhhcccEEEEeCCH----------------HHHHHHHHHHHHcCCCEEeecCceee
Confidence            553 46666655431                23567888999999998888776543

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=91.70  E-value=0.71  Score=36.57  Aligned_cols=102  Identities=17%  Similarity=0.133  Sum_probs=62.2

Q ss_pred             CCCeEEEEcCCChHHHHH-HHHHHHCC--CeEEE-EeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCCh
Q 016901           79 DDNLAFVAGATGKVGSRT-VRELLKLG--FRVRA-GVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~l-v~~Ll~~G--~~V~~-l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~  154 (380)
                      +..+|.|.| +|.+|+.+ +..+.+.+  .+|++ .++++++.+.+.+..                 +...+       .
T Consensus         2 kkirigiIG-~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~-----------------~~~~~-------~   56 (181)
T d1zh8a1           2 RKIRLGIVG-CGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMV-----------------GNPAV-------F   56 (181)
T ss_dssp             CCEEEEEEC-CSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHH-----------------SSCEE-------E
T ss_pred             CCcEEEEEc-CCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhccc-----------------cccce-------e
Confidence            345899999 79999864 66666543  46765 467777665544321                 11111       1


Q ss_pred             hcHHHHhc--CCCEEEEccccCccc-----------cCCCCCcchhhHHHHHHHHHHHHHcCCC
Q 016901          155 VQIEPALG--NASVVICCIGASEKE-----------VFDITGPYRIDFQATKNLVDAATIAKVN  205 (380)
Q Consensus       155 ~~~~~a~~--~~d~Vi~~Ag~~~~~-----------~~~~~~~~~~nv~g~~~ll~a~~~~~v~  205 (380)
                      .+++++++  ++|+|+-+.....+.           .---+.+...|+.-...+++++++.++.
T Consensus        57 ~~~~ell~~~~id~v~I~tp~~~h~~~~~~al~~gk~V~~EKPl~~~~~e~~~l~~~~~~~~~~  120 (181)
T d1zh8a1          57 DSYEELLESGLVDAVDLTLPVELNLPFIEKALRKGVHVICEKPISTDVETGKKVVELSEKSEKT  120 (181)
T ss_dssp             SCHHHHHHSSCCSEEEECCCGGGHHHHHHHHHHTTCEEEEESSSSSSHHHHHHHHHHHHHCSSC
T ss_pred             eeeeccccccccceeeccccccccccccccccccchhhhcCCCCcCCHHHHHHHHHHHHHhCCe
Confidence            34566664  589998775432110           0011344667888888899999888763

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=91.70  E-value=0.09  Score=45.52  Aligned_cols=35  Identities=20%  Similarity=0.219  Sum_probs=32.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCc
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV  114 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~  114 (380)
                      +.++|+|.| +|..|...+.+|.++|++|.++.++.
T Consensus        29 ~pkkV~IIG-aG~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          29 NPKHVVIVG-AGMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             SCCEEEEEC-CBHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            567999999 89999999999999999999998754

>d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Ornithine cyclodeaminase
species: Pseudomonas putida [TaxId: 303]

Probab=91.69  E-value=0.38  Score=42.67  Aligned_cols=74  Identities=14%  Similarity=0.170  Sum_probs=56.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHH-CC-CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLK-LG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~-~G-~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ..+++.|.| +|..+..-++.+.+ .+ .+|++.+|++++.+++.+.+...              .++.+..+     ++
T Consensus       127 da~~l~iiG-~G~QA~~~~~a~~~v~~i~~V~v~~r~~~~~~~~~~~l~~~--------------~g~~v~~~-----~s  186 (340)
T d1x7da_         127 NARKMALIG-NGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEY--------------SGLTIRRA-----SS  186 (340)
T ss_dssp             TCCEEEEEC-CSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTC--------------TTCEEEEC-----SS
T ss_pred             CCceEEEEc-ccHHHHHHHHHHhhhcceeeeEEEecChHHHHHHHHhhhhc--------------cCCCceec-----CC
Confidence            557899999 88999988887765 45 58999999999888877665431              34555443     45


Q ss_pred             HHHHhcCCCEEEEccc
Q 016901          157 IEPALGNASVVICCIG  172 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag  172 (380)
                      +++++.++|+|+.|.+
T Consensus       187 ~~eav~~ADIi~t~Ta  202 (340)
T d1x7da_         187 VAEAVKGVDIITTVTA  202 (340)
T ss_dssp             HHHHHTTCSEEEECCC
T ss_pred             HHHHHhcCCceeeccc
Confidence            7899999999998764

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=91.54  E-value=0.75  Score=34.02  Aligned_cols=75  Identities=11%  Similarity=0.020  Sum_probs=50.7

Q ss_pred             CCCeEEEEcCCC----------hHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEE
Q 016901           79 DDNLAFVAGATG----------KVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVE  148 (380)
Q Consensus        79 ~~~~vlVtGatG----------~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  148 (380)
                      ..++|||.|+..          +-+.+.++.|.+.|++++++..+++....-                 .   .-..-+.
T Consensus         3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd-----------------~---d~aD~lY   62 (121)
T d1a9xa4           3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTD-----------------Y---DTSDRLY   62 (121)
T ss_dssp             SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTS-----------------T---TSSSEEE
T ss_pred             CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcC-----------------h---hhcCceE
Confidence            457899999644          789999999999999999999988653210                 0   1111122


Q ss_pred             cCCCChhcHHHHh--cCCCEEEEcccc
Q 016901          149 CDLEKRVQIEPAL--GNASVVICCIGA  173 (380)
Q Consensus       149 ~Dl~d~~~~~~a~--~~~d~Vi~~Ag~  173 (380)
                      ..--..+.+.+.+  ++.|.||-..|.
T Consensus        63 feplt~e~v~~Ii~~E~p~~ii~~~GG   89 (121)
T d1a9xa4          63 FEPVTLEDVLEIVRIEKPKGVIVQYGG   89 (121)
T ss_dssp             CCCCSHHHHHHHHHHHCCSEEECSSST
T ss_pred             EccCCHHHHHHHHHHhCCCEEEeehhh
Confidence            2222346666666  479999887664

>d1uwva2 c.66.1.40 (A:75-432) rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: (Uracil-5-)-methyltransferase
domain: rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain
species: Escherichia coli [TaxId: 562]

Probab=91.47  E-value=0.4  Score=42.63  Aligned_cols=127  Identities=13%  Similarity=0.024  Sum_probs=80.4

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh-cHHHH
Q 016901           82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV-QIEPA  160 (380)
Q Consensus        82 ~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~-~~~~a  160 (380)
                      .+=..+|+|.+|..|+    +++.+|+++.-+++..+....-.+..+            ..+++++.+|..+.- .....
T Consensus       216 vlDLycG~G~fsl~La----~~~~~V~gvE~~~~ai~~A~~na~~n~------------i~n~~~~~~~~~~~~~~~~~~  279 (358)
T d1uwva2         216 VLDLFCGMGNFTLPLA----TQAASVVGVEGVPALVEKGQQNARLNG------------LQNVTFYHENLEEDVTKQPWA  279 (358)
T ss_dssp             EEEESCTTTTTHHHHH----TTSSEEEEEESCHHHHHHHHHHHHHTT------------CCSEEEEECCTTSCCSSSGGG
T ss_pred             EEEecccccccchhcc----ccccEEEeccCcHHHHHHHHHhHHhcc------------cccceeeecchhhhhhhhhhh
Confidence            4557799999998764    567899999998887666554332221            268999999987632 22233


Q ss_pred             hcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEEccCCCCCCCCchhhhchhhHHHHHHHHHHH
Q 016901          161 LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEE  240 (380)
Q Consensus       161 ~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~  240 (380)
                      ....|+||-.-...                |...+++.+.+.+++++||+|-             +|.+    -..-+..
T Consensus       280 ~~~~d~vilDPPR~----------------G~~~~~~~l~~~~~~~ivYVSC-------------np~T----laRDl~~  326 (358)
T d1uwva2         280 KNGFDKVLLDPARA----------------GAAGVMQQIIKLEPIRIVYVSC-------------NPAT----LARDSEA  326 (358)
T ss_dssp             TTCCSEEEECCCTT----------------CCHHHHHHHHHHCCSEEEEEES-------------CHHH----HHHHHHH
T ss_pred             hccCceEEeCCCCc----------------cHHHHHHHHHHcCCCEEEEEeC-------------CHHH----HHHHHHH
Confidence            35689988763221                1223556666668899999994             2211    1111222


Q ss_pred             HHHHCCCCEEEEecCccc
Q 016901          241 ALIASGLPYTIVRPGGME  258 (380)
Q Consensus       241 ~l~~~g~~~~ivRpg~v~  258 (380)
                       +.+.|....-++|-.++
T Consensus       327 -l~~~gy~l~~i~~~D~F  343 (358)
T d1uwva2         327 -LLKAGYTIARLAMLDMF  343 (358)
T ss_dssp             -HHHTTCEEEEEEEECCS
T ss_pred             -HHHCCCeEeEEEEEecC
Confidence             33577888888887776

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=91.35  E-value=0.093  Score=44.63  Aligned_cols=31  Identities=26%  Similarity=0.145  Sum_probs=29.2

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEeCCc
Q 016901           83 AFVAGATGKVGSRTVRELLKLGFRVRAGVRSV  114 (380)
Q Consensus        83 vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~  114 (380)
                      |+|.| +|.+|..++.+|+++|++|+++.++.
T Consensus         7 vvIIG-aGi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIG-GGIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            99999 89999999999999999999999864

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=90.97  E-value=0.09  Score=44.61  Aligned_cols=33  Identities=21%  Similarity=0.069  Sum_probs=29.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCc
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV  114 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~  114 (380)
                      |+|+|.| +|.-|...+.+|.++|++|+++-++.
T Consensus         1 m~V~IIG-aG~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           1 MNVAVVG-GGISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             CCEEEEC-CBHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             CeEEEEC-CCHHHHHHHHHHHhCCCCEEEEecCC
Confidence            5799999 59999999999999999999998753

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=90.77  E-value=0.52  Score=38.82  Aligned_cols=79  Identities=15%  Similarity=0.133  Sum_probs=53.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      .+.+||..|+..+--.+++..|.  |.+|+++.++++-.+...+.++++++            .++.++.+|..+..   
T Consensus        78 ~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~g~------------~nv~~~~gd~~~g~---  140 (215)
T d1jg1a_          78 PGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERAGV------------KNVHVILGDGSKGF---  140 (215)
T ss_dssp             TTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHTTC------------CSEEEEESCGGGCC---
T ss_pred             ccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHcCC------------ceeEEEECccccCC---
Confidence            56688888755444444555565  46699999998877776666666543            68999999986522   


Q ss_pred             HHhcCCCEEEEccccC
Q 016901          159 PALGNASVVICCIGAS  174 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~~  174 (380)
                      ..-...|.||.+++..
T Consensus       141 ~~~~pfD~Iiv~~a~~  156 (215)
T d1jg1a_         141 PPKAPYDVIIVTAGAP  156 (215)
T ss_dssp             GGGCCEEEEEECSBBS
T ss_pred             cccCcceeEEeecccc
Confidence            1135689998877643

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=90.62  E-value=0.14  Score=40.06  Aligned_cols=34  Identities=15%  Similarity=0.089  Sum_probs=29.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCCc
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSV  114 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~--~V~~l~R~~  114 (380)
                      +|+|+|.| .|++|..++..|.+.|.  +|+++.+++
T Consensus         2 gkrivIvG-gG~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           2 GRKVVVVG-GGTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCcEEEEC-ccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            57999999 89999999999999874  788887765

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=90.48  E-value=0.23  Score=41.35  Aligned_cols=36  Identities=25%  Similarity=0.477  Sum_probs=32.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCc
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV  114 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~  114 (380)
                      ...++|+|.| +|..|...+..|+++|++|+++.++.
T Consensus        47 ~~~k~VvIIG-aGpAGl~aA~~l~~~G~~v~l~E~~~   82 (233)
T d1djqa3          47 KNKDSVLIVG-AGPSGSEAARVLMESGYTVHLTDTAE   82 (233)
T ss_dssp             SSCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cCCceEEEEc-ccHHHHHHHHHHHHhccceeeEeecc
Confidence            3678999999 89999999999999999999998765

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=90.25  E-value=0.64  Score=38.08  Aligned_cols=79  Identities=16%  Similarity=0.101  Sum_probs=51.8

Q ss_pred             CCCeEEEEcCC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           79 DDNLAFVAGAT-GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        79 ~~~~vlVtGat-G~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      .+++||-.|+. |+....+ .++...+..|+++..++...+...+.++..++            .++.++.+|..+..  
T Consensus        75 ~g~~VLdiG~GtG~~s~~l-a~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~------------~n~~~~~~d~~~~~--  139 (213)
T d1dl5a1          75 KGMRVLEIGGGTGYNAAVM-SRVVGEKGLVVSVEYSRKICEIAKRNVERLGI------------ENVIFVCGDGYYGV--  139 (213)
T ss_dssp             TTCEEEEECCTTSHHHHHH-HHHHCTTCEEEEEESCHHHHHHHHHHHHHTTC------------CSEEEEESCGGGCC--
T ss_pred             ccceEEEecCccchhHHHH-HHHhCCCCcEEEeecchhhHHHhhhhHhhhcc------------cccccccCchHHcc--
Confidence            56789987754 4444444 34444556899999999877777666655432            57888888865422  


Q ss_pred             HHHhcCCCEEEEcccc
Q 016901          158 EPALGNASVVICCIGA  173 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag~  173 (380)
                       ..-..+|.|+.+++.
T Consensus       140 -~~~~~fD~I~~~~~~  154 (213)
T d1dl5a1         140 -PEFSPYDVIFVTVGV  154 (213)
T ss_dssp             -GGGCCEEEEEECSBB
T ss_pred             -ccccchhhhhhhccH
Confidence             112458999988754

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=90.21  E-value=0.44  Score=39.05  Aligned_cols=78  Identities=18%  Similarity=0.147  Sum_probs=56.8

Q ss_pred             CCCeEEEEcCC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           79 DDNLAFVAGAT-GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        79 ~~~~vlVtGat-G~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      .+++||=.|+. |..-.++++. ...| +|++++-++...+.+.+..+..              +++.++.+|..++...
T Consensus        56 pg~~VLDlGcG~G~~~~~la~~-v~~g-~V~gvDis~~~i~~a~~~a~~~--------------~ni~~i~~d~~~~~~~  119 (209)
T d1nt2a_          56 GDERVLYLGAASGTTVSHLADI-VDEG-IIYAVEYSAKPFEKLLELVRER--------------NNIIPLLFDASKPWKY  119 (209)
T ss_dssp             SSCEEEEETCTTSHHHHHHHHH-TTTS-EEEEECCCHHHHHHHHHHHHHC--------------SSEEEECSCTTCGGGT
T ss_pred             CCCEEEEeCCcCCHHHHHHHHh-ccCC-eEEEEeCCHHHHHHHHHHhhcc--------------CCceEEEeeccCcccc
Confidence            56789888854 5555555443 3445 8999999998877766554432              6899999999998877


Q ss_pred             HHHhcCCCEEEEccc
Q 016901          158 EPALGNASVVICCIG  172 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag  172 (380)
                      ...+..+|+|+|...
T Consensus       120 ~~~~~~vd~v~~~~~  134 (209)
T d1nt2a_         120 SGIVEKVDLIYQDIA  134 (209)
T ss_dssp             TTTCCCEEEEEECCC
T ss_pred             ccccceEEEEEeccc
Confidence            777778888888643

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=90.17  E-value=0.027  Score=44.02  Aligned_cols=38  Identities=26%  Similarity=0.123  Sum_probs=27.4

Q ss_pred             EEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH
Q 016901           84 FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQ  122 (380)
Q Consensus        84 lVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~  122 (380)
                      -+.| +|-+|+++++.|.+.++.+.+..|++++.+++.+
T Consensus         3 gfIG-~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~   40 (153)
T d2i76a2           3 NFVG-TGTLTRFFLECLKDRYEIGYILSRSIDRARNLAE   40 (153)
T ss_dssp             EEES-CCHHHHHHHHTTC----CCCEECSSHHHHHHHHH
T ss_pred             EEEe-CcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhh
Confidence            4566 9999999999886544445678999998888765

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=89.97  E-value=0.98  Score=35.55  Aligned_cols=104  Identities=16%  Similarity=0.111  Sum_probs=61.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceE------------EEE
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLE------------LVE  148 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~------------~~~  148 (380)
                      ++|.|-| =|.||+.+.+.|.+++.+|+++.. ....+.+...++---       ....+...+.            +..
T Consensus         1 ikigING-fGRIGR~~~R~l~~~~i~iv~INd-~~~~~~~ayLl~yDS-------~hG~~~~~v~~~~~~l~i~g~~I~~   71 (168)
T d2g82a1           1 MKVGING-FGRIGRQVFRILHSRGVEVALIND-LTDNKTLAHLLKYDS-------IYHRFPGEVAYDDQYLYVDGKAIRA   71 (168)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCCEEEEEC-SSCHHHHHHHHHCCT-------TTCSCSSCEEECSSEEEETTEEEEE
T ss_pred             CEEEEEC-CcHHHHHHHHHHhcCCCEEEEECC-Ccchhhhhheeeccc-------ccCccccccccccceeEecceeEEE
Confidence            4688888 999999999999999999988764 345555544433111       1111111111            111


Q ss_pred             cCCCChhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEE
Q 016901          149 CDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIM  209 (380)
Q Consensus       149 ~Dl~d~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~  209 (380)
                      ..-.|++++.-.-.++|+||-|.|....                ...++.-.+.|++++|.
T Consensus        72 ~~~~~p~~i~W~~~gvdiViEcTG~f~~----------------~~~~~~hl~~gakkVii  116 (168)
T d2g82a1          72 TAVKDPKEIPWAEAGVGVVIESTGVFTD----------------ADKAKAHLEGGAKKVII  116 (168)
T ss_dssp             ECCSSGGGCCTGGGTEEEEEECSSSCCB----------------HHHHTHHHHTTCSEEEE
T ss_pred             EecCChHHCcccccCCceeEeccccccc----------------hHHhhhhhccccceeee
Confidence            2233455555444579999999986521                12223334568888876

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=89.72  E-value=0.25  Score=40.15  Aligned_cols=79  Identities=10%  Similarity=0.094  Sum_probs=58.2

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHHHh
Q 016901           82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPAL  161 (380)
Q Consensus        82 ~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~a~  161 (380)
                      .+=+|-|+|+.-.++++.+ . +.+|+++++++.......+.++.++             .++.++.++..+...+..-+
T Consensus        27 ~lD~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~~-------------~r~~~~~~~f~~~~~~~~~~   91 (192)
T d1m6ya2          27 ILDCTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEFS-------------DRVSLFKVSYREADFLLKTL   91 (192)
T ss_dssp             EEETTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGGT-------------TTEEEEECCGGGHHHHHHHT
T ss_pred             EEEecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhcccc-------------ccccchhHHHhhHHHHHHHc
Confidence            4556777888778887765 3 4689999999988777666554432             68999999998866555443


Q ss_pred             --cCCCEEEEccccCc
Q 016901          162 --GNASVVICCIGASE  175 (380)
Q Consensus       162 --~~~d~Vi~~Ag~~~  175 (380)
                        ..+|.|+--.|...
T Consensus        92 ~~~~vdgIl~DlGvSs  107 (192)
T d1m6ya2          92 GIEKVDGILMDLGVST  107 (192)
T ss_dssp             TCSCEEEEEEECSCCH
T ss_pred             CCCCcceeeeccchhH
Confidence              57899988888653

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=89.37  E-value=0.32  Score=37.61  Aligned_cols=36  Identities=11%  Similarity=0.003  Sum_probs=29.8

Q ss_pred             CCeEEEE-cCCChHHHHHHHHHHHCCCeEEEEeCCch
Q 016901           80 DNLAFVA-GATGKVGSRTVRELLKLGFRVRAGVRSVQ  115 (380)
Q Consensus        80 ~~~vlVt-GatG~iG~~lv~~Ll~~G~~V~~l~R~~~  115 (380)
                      ++.++|. .+.||||..+++.|+++|++|+++.+.+.
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~   75 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL   75 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred             CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence            3456665 35799999999999999999999998763

>d1k3ta1 c.2.1.3 (A:1-164,A:334-359) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=89.34  E-value=2  Score=34.32  Aligned_cols=45  Identities=22%  Similarity=0.234  Sum_probs=31.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCC-----CeEEEEeCCchhHHHHHHHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLG-----FRVRAGVRSVQRAENLVQSVK  125 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G-----~~V~~l~R~~~~~~~~~~~~~  125 (380)
                      .++|.|-| =|.||+.+.+.+++++     .+|+.+.......+.+...++
T Consensus         2 ~ikigING-FGRIGR~vlR~~~~~~~~~~~i~iv~Ind~~~~~~~~ayLlk   51 (190)
T d1k3ta1           2 PIKVGING-FGRIGRMVFQALCEDGLLGTEIDVVAVVDMNTDAEYFAYQMR   51 (190)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHHTTCBTTTEEEEEEEESCCCHHHHHHHHH
T ss_pred             CeEEEEEC-CChHHHHHHHHHHHcCCCCCCeEEEEEecCCCCHHHHHHHhh
Confidence            46899999 9999999999999875     356665543334555544443

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=89.24  E-value=0.62  Score=34.11  Aligned_cols=34  Identities=12%  Similarity=0.007  Sum_probs=27.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHH---CCCeEEEEeCCc
Q 016901           80 DNLAFVAGATGKVGSRTVRELLK---LGFRVRAGVRSV  114 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~---~G~~V~~l~R~~  114 (380)
                      +++++|.| +|++|-.++..|.+   +|.+|+++.|.+
T Consensus        20 p~~v~ivG-gG~ig~E~A~~l~~l~~~~~~Vtli~~~~   56 (117)
T d1aoga2          20 PRRVLTVG-GGFISVEFAGIFNAYKPKDGQVTLCYRGE   56 (117)
T ss_dssp             CSEEEEEC-SSHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred             CCeEEEEC-CcHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence            46899999 59999999966554   457899998855

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=88.75  E-value=0.31  Score=36.61  Aligned_cols=75  Identities=16%  Similarity=0.161  Sum_probs=52.8

Q ss_pred             CCCeEEEEcCCC----------hHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEE
Q 016901           79 DDNLAFVAGATG----------KVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVE  148 (380)
Q Consensus        79 ~~~~vlVtGatG----------~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  148 (380)
                      ..++|||.|+..          +-+.+.++.|.+.|++++.+..+++....-.                    .-..-+.
T Consensus         6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~--------------------d~aD~lY   65 (127)
T d1a9xa3           6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDP--------------------EMADATY   65 (127)
T ss_dssp             SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCG--------------------GGSSEEE
T ss_pred             CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcCh--------------------hhcceee
Confidence            458999999743          7899999999999999999999886532100                    1111223


Q ss_pred             cCCCChhcHHHHh--cCCCEEEEcccc
Q 016901          149 CDLEKRVQIEPAL--GNASVVICCIGA  173 (380)
Q Consensus       149 ~Dl~d~~~~~~a~--~~~d~Vi~~Ag~  173 (380)
                      ..-...+.+.+.+  .+.|.|+-..|.
T Consensus        66 fePlt~e~v~~Ii~~E~pd~il~~~GG   92 (127)
T d1a9xa3          66 IEPIHWEVVRKIIEKERPDAVLPTMGG   92 (127)
T ss_dssp             CSCCCHHHHHHHHHHHCCSEEECSSSH
T ss_pred             eecCCHHHHHHHHHHhCcCCeEEEeee
Confidence            3333467777777  479999987764

>d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]

Probab=88.52  E-value=1.1  Score=35.33  Aligned_cols=85  Identities=18%  Similarity=0.106  Sum_probs=51.5

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceE------------EEEc
Q 016901           82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLE------------LVEC  149 (380)
Q Consensus        82 ~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~------------~~~~  149 (380)
                      +|.|-| =|.||+.+.+.+++++.+|+++.......+.+...++---       ....+...+.            +...
T Consensus         2 kIgING-fGRIGR~~~R~~~~~~~~ivaINd~~~~~~~~~yLlkyDS-------~hG~~~~~i~~~~~~l~ing~~I~~~   73 (169)
T d1dssg1           2 KIGING-FGRIGRLVLRAALEMGAQVVAVNDPFIALEYMVYMFKYDS-------THGMFKGEVKAEDGALVVDGKKITVF   73 (169)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHHTCCEEEEECTTSCHHHHHHHHHCCT-------TTCCCSSCEEEETTEEEETTEEEEEE
T ss_pred             eEEEEC-CcHHHHHHHHHHHhCCCcEEEECCCCcCHHHHHHHHhccc-------ccCCcCCeEEEeCCEEEECCEEEEEE
Confidence            578888 9999999999999999988887654344444444443211       1111112221            1111


Q ss_pred             CCCChhcHHHHhcCCCEEEEccccC
Q 016901          150 DLEKRVQIEPALGNASVVICCIGAS  174 (380)
Q Consensus       150 Dl~d~~~~~~a~~~~d~Vi~~Ag~~  174 (380)
                      .-.+++++.-.-.++|+||-|.|..
T Consensus        74 ~~~~p~~i~W~~~gvD~ViEcTG~f   98 (169)
T d1dssg1          74 NEMKPENIPWSKAGAEYIVESTGVF   98 (169)
T ss_dssp             CCSSGGGCCHHHHTCCEEEECSSSC
T ss_pred             ecCChHHCCccccCCCEEEecCceE
Confidence            2234555443345899999999865

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.39  E-value=0.25  Score=40.20  Aligned_cols=32  Identities=22%  Similarity=-0.009  Sum_probs=29.6

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCc
Q 016901           82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV  114 (380)
Q Consensus        82 ~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~  114 (380)
                      -|+|.| +|..|...+..|+++|++|.++-++.
T Consensus         7 DviViG-aG~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           7 DVIVLG-TGITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEEC-cCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            389999 99999999999999999999998865

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=88.33  E-value=0.25  Score=43.36  Aligned_cols=36  Identities=22%  Similarity=0.100  Sum_probs=31.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCCch
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQ  115 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G--~~V~~l~R~~~  115 (380)
                      .+|+|+|.| +|.-|...+..|+++|  ++|+++-|+..
T Consensus         3 ~~KrVaIIG-aG~sGl~~A~~L~~~~~~~~v~vfEk~~~   40 (335)
T d2gv8a1           3 TIRKIAIIG-AGPSGLVTAKALLAEKAFDQVTLFERRGS   40 (335)
T ss_dssp             SCCEEEEEC-CSHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred             CCCeEEEEC-cCHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence            568999999 8999999999999886  69999998753

>d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=88.32  E-value=0.93  Score=37.04  Aligned_cols=95  Identities=14%  Similarity=0.113  Sum_probs=61.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC---eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCC-C---
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGF---RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDL-E---  152 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~---~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl-~---  152 (380)
                      ..+|.|.| -|+-|..++.+|.+.|.   +.+++.-+...+....                    ....+..+.- +   
T Consensus        15 ~~ki~ViG-vGGaG~n~v~~l~~~~~~~v~~iainTD~~~L~~~~--------------------~~~ki~ig~~~t~g~   73 (209)
T d2vapa1          15 KAKITVVG-CGGAGNNTITRLKMEGIEGAKTVAINTDAQQLIRTK--------------------ADKKILIGKKLTRGL   73 (209)
T ss_dssp             CCCEEEEE-EHHHHHHHHHHHHHHTCTTEEEEEEESBHHHHHTSC--------------------CSEEEECCTTTTTTB
T ss_pred             CCcEEEEE-eCChHHHHHHHHHHcCCCceEEEEEeCCHHHHhcCC--------------------cchhccccccccccc
Confidence            35799999 89999999999999874   4455555544332110                    1122222211 1   


Q ss_pred             ---------------ChhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCC
Q 016901          153 ---------------KRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN  205 (380)
Q Consensus       153 ---------------d~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~  205 (380)
                                     +.+.+.+.++++|.||-+||.....          ---++-.+.+.+++.+..
T Consensus        74 Gag~~p~~g~~aa~e~~~~I~~~l~~~d~vfi~AGlGGGT----------Gsgaapvia~~ake~g~l  131 (209)
T d2vapa1          74 GAGGNPKIGEEAAKESAEEIKAAIQDSDMVFITCGLGGGT----------GTGSAPVVAEISKKIGAL  131 (209)
T ss_dssp             CCTTCHHHHHHHHHHTHHHHHHHHTTCSEEEEEEETTSSH----------HHHHHHHHHHHHHHTTCE
T ss_pred             ccccchHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCc----------cccHHHHHHHHHHHcCCc
Confidence                           2346777889999999999976432          334456688899998863

>d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Thermotoga maritima [TaxId: 2336]

Probab=88.21  E-value=0.69  Score=37.39  Aligned_cols=94  Identities=15%  Similarity=0.169  Sum_probs=61.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCC---eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEc-CCC----
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGF---RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVEC-DLE----  152 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~---~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-Dl~----  152 (380)
                      ++|.|.| -|+-|..++.+|.+.|.   +.+++.-+...+...                    .....+..+ +++    
T Consensus         1 ~kI~viG-vGGaG~n~v~~l~~~~~~~v~~iainTD~~~L~~~--------------------~a~~ki~iG~~~t~G~G   59 (194)
T d1w5fa1           1 LKIKVIG-VGGAGNNAINRMIEIGIHGVEFVAVNTDLQVLEAS--------------------NADVKIQIGENITRGLG   59 (194)
T ss_dssp             CCEEEEE-EHHHHHHHHHHHHHHCCTTEEEEEEESCHHHHHTC--------------------CCSEEEECCTTTTTTSC
T ss_pred             CeEEEEE-eCchHHHHHHHHHHcCCCceEEEEEcCCHHHHhcC--------------------CcceEEecccccCCCcc
Confidence            3688998 88999999999999873   445555554332210                    011222222 111    


Q ss_pred             --------------ChhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCC
Q 016901          153 --------------KRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN  205 (380)
Q Consensus       153 --------------d~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~  205 (380)
                                    +.+.+.+.++++|.||-+||.....          ---++-.+.+.+++.+.-
T Consensus        60 ~g~~p~~g~~aa~e~~~~I~~~l~~~d~vfi~AGlGGgT----------GtgaapviA~~ake~g~l  116 (194)
T d1w5fa1          60 AGGRPEIGEQAALESEEKIREVLQDTHMVFITAGFGGGT----------GTGASPVIAKIAKEMGIL  116 (194)
T ss_dssp             CTTCHHHHHHHHHHTHHHHHHHTTTCSEEEEEEETTSSH----------HHHHHHHHHHHHHHTTCE
T ss_pred             cccCchhhHhHHHHHHHHHHHHhcCCCeEEEEEecCCCc----------ccchHHHHHHHHHHcCCc
Confidence                          2356777889999999999976432          334566788999998863

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=88.20  E-value=0.33  Score=38.52  Aligned_cols=88  Identities=10%  Similarity=-0.002  Sum_probs=52.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      .+++||..|..-  |. .+..|+++|++|++++-++...+...+..+...................+++.+|+.+...  
T Consensus        20 ~~~rvLd~GCG~--G~-~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~--   94 (201)
T d1pjza_          20 PGARVLVPLCGK--SQ-DMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTA--   94 (201)
T ss_dssp             TTCEEEETTTCC--SH-HHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTH--
T ss_pred             CCCEEEEecCcC--CH-HHHHHHHcCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceeccccccccc--
Confidence            457899999443  33 5568888999999999999877776655433221100000000012456788888876542  


Q ss_pred             HHhcCCCEEEEcc
Q 016901          159 PALGNASVVICCI  171 (380)
Q Consensus       159 ~a~~~~d~Vi~~A  171 (380)
                      ......|.|+...
T Consensus        95 ~~~~~~D~i~~~~  107 (201)
T d1pjza_          95 RDIGHCAAFYDRA  107 (201)
T ss_dssp             HHHHSEEEEEEES
T ss_pred             ccccceeEEEEEe
Confidence            2234467776643

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=88.13  E-value=0.85  Score=35.45  Aligned_cols=36  Identities=17%  Similarity=0.292  Sum_probs=24.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHH-CC-CeEEEEe-CCch
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLK-LG-FRVRAGV-RSVQ  115 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~-~G-~~V~~l~-R~~~  115 (380)
                      ++.+|.|.| +|.+|..+...+++ .. .+++++. |+.+
T Consensus         3 kkirvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~   41 (157)
T d1nvmb1           3 QKLKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAA   41 (157)
T ss_dssp             SCEEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTT
T ss_pred             CCcEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchh
Confidence            446899999 99999875544444 43 5777764 6654

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=88.06  E-value=0.23  Score=42.14  Aligned_cols=31  Identities=23%  Similarity=0.215  Sum_probs=28.8

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEeCCc
Q 016901           83 AFVAGATGKVGSRTVRELLKLGFRVRAGVRSV  114 (380)
Q Consensus        83 vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~  114 (380)
                      |+|.| +|.+|..++.+|+++|++|+++.+..
T Consensus         6 vvIIG-aGi~Gls~A~~La~~G~~V~viE~~~   36 (281)
T d2gf3a1           6 VIVVG-AGSMGMAAGYQLAKQGVKTLLVDAFD   36 (281)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            88999 89999999999999999999998854

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.88  E-value=0.34  Score=41.47  Aligned_cols=34  Identities=21%  Similarity=0.320  Sum_probs=30.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS  113 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~  113 (380)
                      +..+|+|.| +|.-|...+.+|.++|++|.++-++
T Consensus         4 ~~~kViVIG-aG~aGL~aA~~L~~~G~~V~VlEa~   37 (449)
T d2dw4a2           4 KTGKVIIIG-SGVSGLAAARQLQSFGMDVTLLEAR   37 (449)
T ss_dssp             CCCEEEEEC-CBHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHhCCCCEEEEeCC
Confidence            456799999 8999999999999999999998654

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=87.80  E-value=1.2  Score=32.27  Aligned_cols=34  Identities=18%  Similarity=0.115  Sum_probs=28.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHH---CCCeEEEEeCCc
Q 016901           80 DNLAFVAGATGKVGSRTVRELLK---LGFRVRAGVRSV  114 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~---~G~~V~~l~R~~  114 (380)
                      +++++|.| .|++|-.++..|.+   .|.+|.++.|.+
T Consensus        18 p~~v~IiG-gG~ig~E~A~~l~~~~~~g~~Vtli~~~~   54 (117)
T d1feca2          18 PKRALCVG-GGYISIEFAGIFNAYKARGGQVDLAYRGD   54 (117)
T ss_dssp             CSEEEEEC-SSHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred             CCeEEEEC-CChHHHHHHHHhHhhcccccccceecccc
Confidence            46899999 89999999976654   488999999865

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.39  E-value=0.43  Score=41.30  Aligned_cols=32  Identities=19%  Similarity=0.239  Sum_probs=28.0

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC
Q 016901           82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRS  113 (380)
Q Consensus        82 ~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~  113 (380)
                      +.+=--+||..|.+|+++++.+|++|+++.+.
T Consensus        38 R~ItN~SSGk~G~alA~~~~~~Ga~V~li~g~   69 (290)
T d1p9oa_          38 RFLDNFSSGRRGATSAEAFLAAGYGVLFLYRA   69 (290)
T ss_dssp             EEEEECCCCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             eEeCCCCchHHHHHHHHHHHHcCCEEEEEecC
Confidence            56666779999999999999999999999764

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=87.21  E-value=1  Score=39.25  Aligned_cols=80  Identities=13%  Similarity=-0.041  Sum_probs=51.5

Q ss_pred             CCCeEEE-EcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChh-c
Q 016901           79 DDNLAFV-AGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV-Q  156 (380)
Q Consensus        79 ~~~~vlV-tGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~-~  156 (380)
                      .+++||= .-++|..+.++    +..+.+|++++.++...+...+-++..++            .+++++.+|..+.. .
T Consensus       145 ~g~rVLDl~~gtG~~s~~~----a~g~~~V~~vD~s~~al~~a~~n~~~ngl------------~~~~~i~~d~~~~~~~  208 (318)
T d1wxxa2         145 RGERALDVFSYAGGFALHL----ALGFREVVAVDSSAEALRRAEENARLNGL------------GNVRVLEANAFDLLRR  208 (318)
T ss_dssp             CEEEEEEETCTTTHHHHHH----HHHEEEEEEEESCHHHHHHHHHHHHHTTC------------TTEEEEESCHHHHHHH
T ss_pred             CCCeeeccCCCCcHHHHHH----HhcCCcEEeecchHHHHHHHHHHHHHcCC------------CCcceeeccHHHHhhh
Confidence            4556664 45566665443    34567999999999887776654443322            56899999986632 2


Q ss_pred             HHHHhcCCCEEEEccccC
Q 016901          157 IEPALGNASVVICCIGAS  174 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag~~  174 (380)
                      +...-+.+|.||......
T Consensus       209 ~~~~~~~fD~Vi~DpP~~  226 (318)
T d1wxxa2         209 LEKEGERFDLVVLDPPAF  226 (318)
T ss_dssp             HHHTTCCEEEEEECCCCS
T ss_pred             hHhhhcCCCEEEEcCCcc
Confidence            222234689999986543

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=86.72  E-value=0.25  Score=42.91  Aligned_cols=33  Identities=24%  Similarity=0.230  Sum_probs=29.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCc
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV  114 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~  114 (380)
                      ..|+|.| +|.-|..++++|+++|++|.++-++.
T Consensus         2 ~dv~IIG-aG~sGl~~A~~L~~~g~~V~iiEk~~   34 (298)
T d1i8ta1           2 YDYIIVG-SGLFGAVCANELKKLNKKVLVIEKRN   34 (298)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHGGGTCCEEEECSSS
T ss_pred             ccEEEEC-CcHHHHHHHHHHHhCCCcEEEEECCC
Confidence            4699999 89999999999999999999998764

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=86.63  E-value=0.26  Score=42.05  Aligned_cols=33  Identities=21%  Similarity=0.122  Sum_probs=30.4

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCch
Q 016901           82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ  115 (380)
Q Consensus        82 ~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~  115 (380)
                      .|+|.| .|-.|..++..|.++|++|.++.|+++
T Consensus         4 ~V~IvG-aGp~Gl~~A~~L~~~G~~v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIG-AGPSGLLLGQLLHKAGIDNVILERQTP   36 (292)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred             CEEEEC-cCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            599999 789999999999999999999998764

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=86.51  E-value=0.31  Score=38.32  Aligned_cols=33  Identities=18%  Similarity=0.256  Sum_probs=27.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVR  112 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R  112 (380)
                      .+++|+|.| +|++|..++..|.+.|.+|.++.+
T Consensus         2 ~~~~VvIIG-gG~~G~e~A~~l~~~g~~v~v~~~   34 (185)
T d1q1ra1           2 ANDNVVIVG-TGLAGVEVAFGLRASGWEGNIRLV   34 (185)
T ss_dssp             CSCEEEEEC-CSHHHHHHHHHHHHTTCCSEEEEE
T ss_pred             CCCCEEEEC-CcHHHHHHHHHHHHcCCceEEEEe
Confidence            356899999 899999999999999987655543

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=86.43  E-value=0.33  Score=41.71  Aligned_cols=32  Identities=22%  Similarity=0.366  Sum_probs=28.8

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCc
Q 016901           82 LAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV  114 (380)
Q Consensus        82 ~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~  114 (380)
                      .|+|.| +|.+|..++.+|+++|. +|.++.|+.
T Consensus         3 dViIIG-aGi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIG-AGIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            599999 89999999999999995 799998864

>d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Archaeal alanine dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=86.17  E-value=2.2  Score=37.02  Aligned_cols=71  Identities=14%  Similarity=0.111  Sum_probs=52.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHH-CC-CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhc
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLK-LG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~-~G-~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~  156 (380)
                      ..+++.|.| +|..+++.++.|.. +. .+|++.+|++++.+.+.+.++..+               +...       .+
T Consensus       124 ~~~~l~iiG-aG~QA~~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~~~~---------------~~~~-------~~  180 (320)
T d1omoa_         124 NSSVFGFIG-CGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRG---------------ISAS-------VQ  180 (320)
T ss_dssp             TCCEEEEEC-CSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTT---------------CCEE-------EC
T ss_pred             CccEEEEec-CcccHHHHHHHHHHHhhhhhcccccCCHHHHHHHHHHHHhcC---------------Cccc-------cc
Confidence            457899998 99999999998876 34 589999999998888877665421               2221       12


Q ss_pred             HHHHhcCCCEEEEccc
Q 016901          157 IEPALGNASVVICCIG  172 (380)
Q Consensus       157 ~~~a~~~~d~Vi~~Ag  172 (380)
                      ..+++.++|+|+.+..
T Consensus       181 ~~~a~~~aDiV~taT~  196 (320)
T d1omoa_         181 PAEEASRCDVLVTTTP  196 (320)
T ss_dssp             CHHHHTSSSEEEECCC
T ss_pred             hhhhhccccEEEEecc
Confidence            2466788999988754

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=85.99  E-value=0.4  Score=38.45  Aligned_cols=33  Identities=24%  Similarity=0.231  Sum_probs=28.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCCc
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSV  114 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G--~~V~~l~R~~  114 (380)
                      |+|+|.| +|++|..++..|.+.+  .+|+++.|+.
T Consensus         1 ~KVvIIG-gG~~G~e~A~~l~~~~~~~~V~v~~~~~   35 (198)
T d1nhpa1           1 MKVIVLG-SSHGGYEAVEELLNLHPDAEIQWYEKGD   35 (198)
T ss_dssp             CEEEEEC-SSHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred             CEEEEEC-CcHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence            6899999 7899999999998874  6888888764

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.72  E-value=1.7  Score=35.75  Aligned_cols=85  Identities=11%  Similarity=-0.011  Sum_probs=58.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      .+.+||-.|...+--.+++.++.....+|+.+.++++-.+...+.+++.++...       ...++.++.+|..+...  
T Consensus        76 ~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~-------~~~~~~~~~gD~~~~~~--  146 (224)
T d1i1na_          76 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLL-------SSGRVQLVVGDGRMGYA--  146 (224)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHH-------HTSSEEEEESCGGGCCG--
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccc-------cccceEEEEeecccccc--
Confidence            567999999776666667777777778999999999877766666655433210       11578888999754221  


Q ss_pred             HHhcCCCEEEEcccc
Q 016901          159 PALGNASVVICCIGA  173 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag~  173 (380)
                       .-...|.|+.+++.
T Consensus       147 -~~~~fD~I~~~~~~  160 (224)
T d1i1na_         147 -EEAPYDAIHVGAAA  160 (224)
T ss_dssp             -GGCCEEEEEECSBB
T ss_pred             -hhhhhhhhhhhcch
Confidence             12458999988764

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=85.66  E-value=1.9  Score=36.44  Aligned_cols=76  Identities=12%  Similarity=0.022  Sum_probs=51.4

Q ss_pred             CCCeEEEEcC-CChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           79 DDNLAFVAGA-TGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        79 ~~~~vlVtGa-tG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      .+++||=.|+ +|.+...++++   .|.+|++++-++...+...+.....++.           .+++++.+|..+.. +
T Consensus        67 ~~~~vLDiGcG~G~~~~~la~~---~~~~v~gvD~s~~~i~~a~~~~~~~gl~-----------~~v~~~~~d~~~l~-~  131 (282)
T d2o57a1          67 RQAKGLDLGAGYGGAARFLVRK---FGVSIDCLNIAPVQNKRNEEYNNQAGLA-----------DNITVKYGSFLEIP-C  131 (282)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHH---HCCEEEEEESCHHHHHHHHHHHHHHTCT-----------TTEEEEECCTTSCS-S
T ss_pred             CCCEEEEeCCCCcHHHhhhhcc---CCcEEEEEeccchhhhhhhccccccccc-----------cccccccccccccc-c
Confidence            4578998885 55544444432   2789999999988776666655555443           68999999987743 1


Q ss_pred             HHHhcCCCEEEEcc
Q 016901          158 EPALGNASVVICCI  171 (380)
Q Consensus       158 ~~a~~~~d~Vi~~A  171 (380)
                      .  -+.+|+|+..-
T Consensus       132 ~--~~sfD~V~~~~  143 (282)
T d2o57a1         132 E--DNSYDFIWSQD  143 (282)
T ss_dssp             C--TTCEEEEEEES
T ss_pred             c--ccccchhhccc
Confidence            1  13579988654

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=85.57  E-value=0.068  Score=44.38  Aligned_cols=26  Identities=23%  Similarity=0.185  Sum_probs=23.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeE
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRV  107 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V  107 (380)
                      |+|+|.| +|.+|..++.+|+++|++|
T Consensus         1 mkV~VIG-aGi~GlstA~~L~~~G~~v   26 (246)
T d1kifa1           1 MRVVVIG-AGVIGLSTALCIHERYHSV   26 (246)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHHTTT
T ss_pred             CEEEEEC-chHHHHHHHHHHHHCCCCc
Confidence            5799999 8999999999999999753

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=85.55  E-value=0.51  Score=39.40  Aligned_cols=34  Identities=24%  Similarity=0.148  Sum_probs=30.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCCch
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQ  115 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G-~~V~~l~R~~~  115 (380)
                      ++|+|.| .|..|..++..|.+.| ++|.++-|++.
T Consensus         2 ~~V~IvG-aG~aGl~~A~~L~~~Gi~~V~V~Er~~~   36 (288)
T d3c96a1           2 IDILIAG-AGIGGLSCALALHQAGIGKVTLLESSSE   36 (288)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence            5799999 8999999999999999 48999888653

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=85.43  E-value=2.7  Score=34.38  Aligned_cols=85  Identities=13%  Similarity=0.017  Sum_probs=53.5

Q ss_pred             CCCeEEEEcC-CChHHHHHHHHHHHCC----CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCC
Q 016901           79 DDNLAFVAGA-TGKVGSRTVRELLKLG----FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK  153 (380)
Q Consensus        79 ~~~~vlVtGa-tG~iG~~lv~~Ll~~G----~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d  153 (380)
                      .+.+||..|+ |||.-..+++.+...|    .+|+.+.++++-.+...+.+...++...       ...++.++.+|..+
T Consensus        80 ~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~-------~~~nv~~~~~d~~~  152 (223)
T d1r18a_          80 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSML-------DSGQLLIVEGDGRK  152 (223)
T ss_dssp             TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHH-------HHTSEEEEESCGGG
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhc-------CccEEEEEeccccc
Confidence            5678999986 5666665555555666    4899999988765554443333221100       01579999999764


Q ss_pred             hhcHHHHhcCCCEEEEcccc
Q 016901          154 RVQIEPALGNASVVICCIGA  173 (380)
Q Consensus       154 ~~~~~~a~~~~d~Vi~~Ag~  173 (380)
                      ...   --+..|.||.+++.
T Consensus       153 ~~~---~~~~fD~Iiv~~a~  169 (223)
T d1r18a_         153 GYP---PNAPYNAIHVGAAA  169 (223)
T ss_dssp             CCG---GGCSEEEEEECSCB
T ss_pred             ccc---cccceeeEEEEeec
Confidence            221   12458999988764

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=85.32  E-value=2.6  Score=35.70  Aligned_cols=78  Identities=8%  Similarity=0.057  Sum_probs=51.2

Q ss_pred             CeEE-EEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           81 NLAF-VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        81 ~~vl-VtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      .+++ +.||+|.||..+++   ..+.+|++++.++....-..+=.++.++.           .++.+..+|+.+.-  ..
T Consensus       112 ~~vld~g~GsG~i~~~la~---~~~~~v~a~Dis~~Al~~A~~Na~~~~~~-----------~~~~i~~~~~~~~~--~~  175 (271)
T d1nv8a_         112 KTVADIGTGSGAIGVSVAK---FSDAIVFATDVSSKAVEIARKNAERHGVS-----------DRFFVRKGEFLEPF--KE  175 (271)
T ss_dssp             CEEEEESCTTSHHHHHHHH---HSSCEEEEEESCHHHHHHHHHHHHHTTCT-----------TSEEEEESSTTGGG--GG
T ss_pred             cEEEEeeeeeehhhhhhhh---cccceeeechhhhhHHHHHHHHHHHcCCC-----------ceeEEeeccccccc--cc
Confidence            4455 55666667666542   35688999999987765554434433322           56788899987643  33


Q ss_pred             HhcCCCEEEEccccC
Q 016901          160 ALGNASVVICCIGAS  174 (380)
Q Consensus       160 a~~~~d~Vi~~Ag~~  174 (380)
                      ..+.+|.||.|-...
T Consensus       176 ~~~~fDlIVsNPPYI  190 (271)
T d1nv8a_         176 KFASIEMILSNPPYV  190 (271)
T ss_dssp             GTTTCCEEEECCCCB
T ss_pred             ccCcccEEEEccccc
Confidence            456799999997644

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=84.79  E-value=0.45  Score=38.90  Aligned_cols=32  Identities=19%  Similarity=0.230  Sum_probs=28.8

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCc
Q 016901           82 LAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV  114 (380)
Q Consensus        82 ~vlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~  114 (380)
                      +|+|.| +|..|...+..|.++|+ +|+++-++.
T Consensus         2 ~V~IIG-aG~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVG-AGMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEEC-CBHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEEC-CcHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            599999 89999999999999995 799998764

>d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Escherichia coli [TaxId: 562]

Probab=84.71  E-value=4.5  Score=31.39  Aligned_cols=104  Identities=13%  Similarity=0.038  Sum_probs=60.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEE------------E
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLEL------------V  147 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~------------~  147 (380)
                      ++|.|-| =|.||+.+.+.++++. .+|+++.. ....+.+...++.--       ....+...+.+            .
T Consensus         2 ikigING-FGRIGR~v~R~~~~~~~i~ivaINd-~~~~~~~ayLl~yDS-------vhG~~~~~v~~~~~~l~ing~~I~   72 (166)
T d1gado1           2 IKVGING-FGRIGRIVFRAAQKRSDIEIVAIND-LLDADYMAYMLKYDS-------THGRFDGTVEVKDGHLIVNGKKIR   72 (166)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHTCSSEEEEEEEC-SSCHHHHHHHHHCCT-------TTCSCSSCEEEETTEEEETTEEEE
T ss_pred             eEEEEEC-CcHHHHHHHHHHhhCCCeEEEEEeC-CCCHHHHhhhheecC-------CCCCcCCeEEEeCCEEEECCEEEE
Confidence            4688888 9999999999999885 68887765 344555544443211       11111122221            1


Q ss_pred             EcCCCChhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEE
Q 016901          148 ECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIM  209 (380)
Q Consensus       148 ~~Dl~d~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~  209 (380)
                      ...-.+++.+.-.-.++|+||-|.|....                ..-++.-.+.|++++|.
T Consensus        73 i~~~~~p~~i~W~~~gvDiViEcTG~f~t----------------~~~~~~hl~~gakkVii  118 (166)
T d1gado1          73 VTAERDPANLKWDEVGVDVVAEATGLFLT----------------DETARKHITAGAKKVVM  118 (166)
T ss_dssp             EECCSSGGGGCHHHHTCSEEEECSSSCCS----------------HHHHTHHHHTTCSEEEE
T ss_pred             EEeCCChHHCCccccCCCEEEEccccccC----------------HHHHHHHhcCCCceEEe
Confidence            11223455544334579999999986531                12222334568888774

>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Streptomyces sp. [TaxId: 1931]

Probab=84.65  E-value=0.45  Score=42.04  Aligned_cols=30  Identities=23%  Similarity=0.137  Sum_probs=28.4

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEeCC
Q 016901           83 AFVAGATGKVGSRTVRELLKLGFRVRAGVRS  113 (380)
Q Consensus        83 vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~  113 (380)
                      |+|.| +|+-|..++.+|+++|++|.++-+.
T Consensus         5 VIVVG-sG~aG~v~A~rLaeaG~~VlvLEaG   34 (367)
T d1n4wa1           5 AVVIG-TGYGAAVSALRLGEAGVQTLMLEMG   34 (367)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEeC-cCHHHHHHHHHHHHCcCeEEEEecC
Confidence            89999 9999999999999999999999874

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=84.00  E-value=0.68  Score=38.84  Aligned_cols=34  Identities=29%  Similarity=0.315  Sum_probs=31.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVR  112 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R  112 (380)
                      ..+++|+|-| -|-+|+++++.|.+.|.+|++++.
T Consensus        29 l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD   62 (242)
T d1v9la1          29 IEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSD   62 (242)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEEC
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEeec
Confidence            4788999999 999999999999999999988774

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=83.78  E-value=0.8  Score=39.45  Aligned_cols=34  Identities=29%  Similarity=0.325  Sum_probs=30.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVR  112 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R  112 (380)
                      ..+++|+|-| -|-+|.++++.|.+.|.+|++++.
T Consensus        34 L~gktvaIqG-fGnVG~~~A~~L~e~Gakvv~vsD   67 (293)
T d1hwxa1          34 FGDKTFAVQG-FGNVGLHSMRYLHRFGAKCVAVGE   67 (293)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEc
Confidence            4778999999 799999999999999999998764

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=83.43  E-value=0.29  Score=39.63  Aligned_cols=31  Identities=23%  Similarity=0.349  Sum_probs=24.6

Q ss_pred             CeEEEEcCCChHHHH-----HHHHHHHCCCeEEEEe
Q 016901           81 NLAFVAGATGKVGSR-----TVRELLKLGFRVRAGV  111 (380)
Q Consensus        81 ~~vlVtGatG~iG~~-----lv~~Ll~~G~~V~~l~  111 (380)
                      |+++|||-..++|+.     |+..|.++|++|.++.
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            689999943388875     6678888999998875

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=83.34  E-value=2.3  Score=33.75  Aligned_cols=73  Identities=19%  Similarity=0.204  Sum_probs=50.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      +.+||=.|+ | .|. .+..|+++|++|++++-++..++.........++            .++++..+|+.+..- . 
T Consensus        31 ~grvLDiGc-G-~G~-~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~~~------------~~~~~~~~d~~~~~~-~-   93 (198)
T d2i6ga1          31 PGRTLDLGC-G-NGR-NSLYLAANGYDVTAWDKNPASMANLERIKAAEGL------------DNLQTDLVDLNTLTF-D-   93 (198)
T ss_dssp             SCEEEEETC-T-TSH-HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC------------TTEEEEECCTTTCCC-C-
T ss_pred             CCcEEEECC-C-CCH-HHHHHHHHhhhhccccCcHHHHHHHHHHhhhccc------------cchhhhheecccccc-c-
Confidence            457998884 3 555 4457788999999999998877766554443321            468888889876431 2 


Q ss_pred             HhcCCCEEEEcc
Q 016901          160 ALGNASVVICCI  171 (380)
Q Consensus       160 a~~~~d~Vi~~A  171 (380)
                        ...|.|+.+.
T Consensus        94 --~~fD~I~~~~  103 (198)
T d2i6ga1          94 --GEYDFILSTV  103 (198)
T ss_dssp             --CCEEEEEEES
T ss_pred             --ccccEEEEee
Confidence              3578888654

>d2b4ro1 c.2.1.3 (O:4-152,O:319-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=83.20  E-value=5.1  Score=31.03  Aligned_cols=104  Identities=18%  Similarity=0.046  Sum_probs=58.0

Q ss_pred             eEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEE------------EE
Q 016901           82 LAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLEL------------VE  148 (380)
Q Consensus        82 ~vlVtGatG~iG~~lv~~Ll~~-G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~------------~~  148 (380)
                      +|.|-| =|.||+.+.+.++++ ..+|+++.......+.+...++---       ....+...++.            ..
T Consensus         2 kigING-fGRIGR~v~R~~~~~~~~~iv~INd~~~d~~~~ayLlkyDS-------~hG~~~~~v~~~~~~l~i~~~~I~i   73 (166)
T d2b4ro1           2 KLGING-FGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDS-------VHGQFPCEVTHADGFLLIGEKKVSV   73 (166)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTCSSEEEEEEECTTCCHHHHHHHHHCCT-------TTCSCSSCEEEETTEEEESSCEEEE
T ss_pred             eEEEEC-CCHHHHHHHHHHhhCCCcEEEEECCCCCChHHhhhhhhccc-------ccccceeeeccCCceEEecCcEEEE
Confidence            477777 899999999999987 4677777643223444444333111       11111122211            11


Q ss_pred             cCCCChhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEE
Q 016901          149 CDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIM  209 (380)
Q Consensus       149 ~Dl~d~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~  209 (380)
                      ..-.|+..+.-.-.++|+||-|.|...                +...++.-.+.|++++|.
T Consensus        74 ~~~~~p~~i~W~~~gvdiViEcTG~f~----------------~~~~~~~hl~~gakkVii  118 (166)
T d2b4ro1          74 FAEKDPSQIPWGKCQVDVVCESTGVFL----------------TKELASSHLKGGAKKVIM  118 (166)
T ss_dssp             ECCSSGGGCCHHHHTCSEEEECSSSCC----------------SHHHHTHHHHTTCSEEEE
T ss_pred             EeCCChHHccccccCCCEEEEeccccc----------------chhhhhhhhccCCCEEEE
Confidence            122345554433348999999998653                122233334578888875

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=83.16  E-value=0.9  Score=37.62  Aligned_cols=74  Identities=9%  Similarity=-0.050  Sum_probs=51.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ..++||=.|+..+  . ++..|+++|.+|++++.++..++...+.....+             .+++++.+|+.+...  
T Consensus        37 ~~~~vLDiGCG~G--~-~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~~-------------~~v~~~~~d~~~~~~--   98 (246)
T d1y8ca_          37 VFDDYLDLACGTG--N-LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQG-------------LKPRLACQDISNLNI--   98 (246)
T ss_dssp             CTTEEEEETCTTS--T-THHHHGGGSSEEEEECSCHHHHHHHHHHHHHTT-------------CCCEEECCCGGGCCC--
T ss_pred             CCCeEEEEeCcCC--H-HHHHHHHhCCccEeeccchhhhhhccccccccC-------------ccceeeccchhhhcc--
Confidence            4468999985433  2 566788899999999999876665544433322             468999999876541  


Q ss_pred             HHhcCCCEEEEccc
Q 016901          159 PALGNASVVICCIG  172 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag  172 (380)
                        -+.+|.|+...+
T Consensus        99 --~~~fD~i~~~~~  110 (246)
T d1y8ca_          99 --NRKFDLITCCLD  110 (246)
T ss_dssp             --SCCEEEEEECTT
T ss_pred             --cccccccceeee
Confidence              246899997644

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=83.06  E-value=2.1  Score=34.47  Aligned_cols=31  Identities=19%  Similarity=0.248  Sum_probs=26.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVR  112 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R  112 (380)
                      |+|+|.| ++..|..+++.|++.|++|.++.-
T Consensus         1 Mkiv~~~-~~~~g~~~l~~L~~~g~~I~~Vvt   31 (203)
T d2blna2           1 MKTVVFA-YHDMGCLGIEALLAAGYEISAIFT   31 (203)
T ss_dssp             CEEEEEE-CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CeEEEEe-cCHHHHHHHHHHHHCCCCEEEEEc
Confidence            5788887 666899999999999999977653

>d1rq2a1 c.32.1.1 (A:8-205) Cell-division protein FtsZ {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=82.95  E-value=3  Score=33.47  Aligned_cols=92  Identities=17%  Similarity=0.108  Sum_probs=59.5

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCC---eEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcC-C-------
Q 016901           83 AFVAGATGKVGSRTVRELLKLGF---RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECD-L-------  151 (380)
Q Consensus        83 vlVtGatG~iG~~lv~~Ll~~G~---~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D-l-------  151 (380)
                      |-|.| -|+-|..++.+|.+.|.   +.+++.-+...+...                    .....+..+. +       
T Consensus         4 IkViG-vGGaG~n~vn~~~~~~~~~v~~iainTD~~~L~~~--------------------~~~~ki~iG~~~t~G~Gag   62 (198)
T d1rq2a1           4 IKVVG-IGGGGVNAVNRMIEQGLKGVEFIAINTDAQALLMS--------------------DADVKLDVGRDSTRGLGAG   62 (198)
T ss_dssp             EEEEE-EHHHHHHHHHHHHHTTCCSEEEEEEESCHHHHHHC--------------------CCSEEEECCTTTC-----C
T ss_pred             EEEEE-eCchHHHHHHHHHHcCCCCceEEEEcchHHHHhcC--------------------CcchhhccccccccCCCcC
Confidence            66777 77789999999999873   455555544333210                    0122232331 1       


Q ss_pred             -----------CChhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCC
Q 016901          152 -----------EKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN  205 (380)
Q Consensus       152 -----------~d~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~  205 (380)
                                 .+.+.+.+++++.|.||-+||.....          -.-++--+.+.|++.++-
T Consensus        63 g~p~~g~~aa~e~~~~I~~~l~~~d~vfi~AGlGGgT----------GtGaaPviA~iake~g~l  117 (198)
T d1rq2a1          63 ADPEVGRKAAEDAKDEIEELLRGADMVFVTAGEGGGT----------GTGGAPVVASIARKLGAL  117 (198)
T ss_dssp             CCHHHHHHHHHHTHHHHHHHHTTCSEEEEEEETTSSH----------HHHHHHHHHHHHHHHTCE
T ss_pred             cChhhhHhhHHHHHHHHHHHhcCCCEEEEEEecCCCC----------CcchHHHHHHHHHHcCCc
Confidence                       13467778889999999999976532          334566688999998863

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.47  E-value=0.64  Score=40.04  Aligned_cols=31  Identities=23%  Similarity=0.204  Sum_probs=28.3

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEeCCc
Q 016901           83 AFVAGATGKVGSRTVRELLKLGFRVRAGVRSV  114 (380)
Q Consensus        83 vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~  114 (380)
                      |+|.| +|..|...+.+|.++|++|+++-++.
T Consensus         2 ViVIG-aG~aGL~aA~~L~~~G~~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVG-GGISGMAAAKLLHDSGLNVVVLEARD   32 (383)
T ss_dssp             EEEEC-CBHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEEC-CCHHHHHHHHHHHhCCCCEEEEecCC
Confidence            78999 89999999999999999999997643

>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=82.10  E-value=0.31  Score=38.59  Aligned_cols=30  Identities=27%  Similarity=0.294  Sum_probs=24.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEe
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGV  111 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~  111 (380)
                      .+|+|.| +|++|-.++..|.+.|.+|.++.
T Consensus         4 a~VvIIG-gG~~G~e~A~~l~~~g~~v~i~~   33 (183)
T d1d7ya1           4 APVVVLG-AGLASVSFVAELRQAGYQGLITV   33 (183)
T ss_dssp             SSEEEEC-CSHHHHHHHHHHHHHTCCSCEEE
T ss_pred             CCEEEEC-ccHHHHHHHHHHHhcCCceEEEE
Confidence            3599999 89999999999999997654443

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.60  E-value=0.88  Score=34.25  Aligned_cols=34  Identities=24%  Similarity=0.166  Sum_probs=28.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHH----CCCeEEEEeCCc
Q 016901           80 DNLAFVAGATGKVGSRTVRELLK----LGFRVRAGVRSV  114 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~----~G~~V~~l~R~~  114 (380)
                      .++++|.| .|++|-.++..|.+    .|.+|+++.++.
T Consensus        37 ~k~i~IvG-gG~~G~E~A~~l~~~~~~~g~~Vt~i~~~~   74 (137)
T d1m6ia2          37 VKSITIIG-GGFLGSELACALGRKARALGTEVIQLFPEK   74 (137)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHHHHhcCCEEEEecccc
Confidence            46899998 79999999988863    489999998755

>d1u8fo1 c.2.1.3 (O:3-151,O:316-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Human(Homo sapiens), liver isoform [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Human(Homo sapiens), liver isoform [TaxId: 9606]

Probab=81.56  E-value=3.9  Score=31.91  Aligned_cols=43  Identities=19%  Similarity=0.198  Sum_probs=31.0

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHHHH
Q 016901           82 LAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVK  125 (380)
Q Consensus        82 ~vlVtGatG~iG~~lv~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~  125 (380)
                      +|.|-| =|.||+.+.+.+++++ .+|+++.......+.+...++
T Consensus         3 kIgING-FGRIGR~v~R~~~~~~~~~ivaINd~~~~~~~~ayLlk   46 (169)
T d1u8fo1           3 KVGVNG-FGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQ   46 (169)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHH
T ss_pred             EEEEEC-CcHHHHHHHHHHHHCCCcEEEEecCCCccHHHHHHHHh
Confidence            688988 9999999999998875 788777653334444444443

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=81.36  E-value=0.74  Score=38.91  Aligned_cols=34  Identities=21%  Similarity=0.197  Sum_probs=30.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC
Q 016901           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVR  112 (380)
Q Consensus        78 ~~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R  112 (380)
                      .++++|+|-| .|-+|.++++.|.+.|.+|++++.
T Consensus        34 l~g~~v~IQG-fGnVG~~~a~~L~e~GakvvavsD   67 (255)
T d1bgva1          34 LVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLSG   67 (255)
T ss_dssp             STTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEEE
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEec
Confidence            4778999999 899999999999999999998764

>d1np3a2 c.2.1.6 (A:1-182) Class I ketol-acid reductoisomerase (KARI) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Class I ketol-acid reductoisomerase (KARI)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=81.35  E-value=2.6  Score=33.13  Aligned_cols=67  Identities=21%  Similarity=0.273  Sum_probs=51.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~  158 (380)
                      ++++|.|.| =|--|.+-+..|.+.|.+|++-.|..++..+..+   .               .++++        .++.
T Consensus        15 k~k~IaViG-YGsQG~AhAlNLrDSG~~V~VGLr~gs~s~~~A~---~---------------~Gf~v--------~~~~   67 (182)
T d1np3a2          15 QGKKVAIIG-YGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAE---A---------------HGLKV--------ADVK   67 (182)
T ss_dssp             HTSCEEEEC-CSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHH---H---------------TTCEE--------ECHH
T ss_pred             CCCEEEEEe-eCcHhHHHHhhhhhcCCCEEEEcCCCCccHHHHh---h---------------hcccc--------ccHH
Confidence            568999999 9999999999999999999998887654322211   0               33433        5678


Q ss_pred             HHhcCCCEEEEccc
Q 016901          159 PALGNASVVICCIG  172 (380)
Q Consensus       159 ~a~~~~d~Vi~~Ag  172 (380)
                      ++.+..|+|..+..
T Consensus        68 eA~~~aDiim~L~P   81 (182)
T d1np3a2          68 TAVAAADVVMILTP   81 (182)
T ss_dssp             HHHHTCSEEEECSC
T ss_pred             HHhhhcCeeeeecc
Confidence            99999999999874

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=81.30  E-value=0.79  Score=35.29  Aligned_cols=31  Identities=16%  Similarity=0.219  Sum_probs=26.4

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCc
Q 016901           82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV  114 (380)
Q Consensus        82 ~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~  114 (380)
                      +|+|.| .|++|..++..|. ++.+|+++.|.+
T Consensus         2 rVvIIG-gG~~G~e~A~~l~-~~~~Vtvv~~~~   32 (167)
T d1xhca1           2 KVVIVG-NGPGGFELAKQLS-QTYEVTVIDKEP   32 (167)
T ss_dssp             EEEEEC-CSHHHHHHHHHHT-TTSEEEEECSSS
T ss_pred             eEEEEC-CcHHHHHHHHHHH-cCCCEEEEeccc
Confidence            689999 8999999999885 578999998754

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=81.26  E-value=4  Score=31.21  Aligned_cols=42  Identities=24%  Similarity=0.233  Sum_probs=31.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH
Q 016901           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQ  122 (380)
Q Consensus        79 ~~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~  122 (380)
                      +++++.|.+.+|+.|.-++..+.+.|.++--+  +++..+++.+
T Consensus         2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l~~l--~~~t~~~L~~   43 (163)
T d2csua3           2 RGNKVAIMTNAGGPGVLTADELDKRGLKLATL--EEKTIEELRS   43 (163)
T ss_dssp             SSSEEEEEESCHHHHHHHHHHHHTTTCEECCC--CHHHHHHHHH
T ss_pred             CCCeEEEEECChHHHHHHHHHHHHcCCccCCC--CHHHHHHHHH
Confidence            46789999999999999999999999776443  4444444443

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=81.06  E-value=3.4  Score=32.89  Aligned_cols=74  Identities=15%  Similarity=-0.017  Sum_probs=49.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 016901           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (380)
Q Consensus        80 ~~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~  159 (380)
                      ..+||=.|+..+  . ++..|++.|++|++++-++...+...+.....+             ..+.++.+|..+...-. 
T Consensus        38 ~~~ILDiGcG~G--~-~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~~-------------~~~~~~~~d~~~l~~~~-  100 (226)
T d1ve3a1          38 RGKVLDLACGVG--G-FSFLLEDYGFEVVGVDISEDMIRKAREYAKSRE-------------SNVEFIVGDARKLSFED-  100 (226)
T ss_dssp             CCEEEEETCTTS--H-HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------------CCCEEEECCTTSCCSCT-
T ss_pred             CCEEEEECCCcc--h-hhhhHhhhhcccccccccccchhhhhhhhcccc-------------ccccccccccccccccC-
Confidence            357999985543  2 446778889999999999877666555444322             45778888887643111 


Q ss_pred             HhcCCCEEEEccc
Q 016901          160 ALGNASVVICCIG  172 (380)
Q Consensus       160 a~~~~d~Vi~~Ag  172 (380)
                        ...|+|+....
T Consensus       101 --~~fD~I~~~~~  111 (226)
T d1ve3a1         101 --KTFDYVIFIDS  111 (226)
T ss_dssp             --TCEEEEEEESC
T ss_pred             --cCceEEEEecc
Confidence              34788887643

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=81.04  E-value=2.8  Score=34.43  Aligned_cols=79  Identities=13%  Similarity=0.049  Sum_probs=57.6

Q ss_pred             CCCeEEEEcC-CChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 016901           79 DDNLAFVAGA-TGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (380)
Q Consensus        79 ~~~~vlVtGa-tG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~~  157 (380)
                      .+++||=.|+ +|+.-+++++..- .+-.|++++.++...+.+.+..+.              ..++..+.+|..+++.+
T Consensus        73 pG~~VLDlGaGsG~~t~~la~~VG-~~G~V~aVD~s~~~l~~a~~~a~~--------------~~~~~~i~~d~~~~~~~  137 (227)
T d1g8aa_          73 PGKSVLYLGIASGTTASHVSDIVG-WEGKIFGIEFSPRVLRELVPIVEE--------------RRNIVPILGDATKPEEY  137 (227)
T ss_dssp             TTCEEEEETTTSTTHHHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHSS--------------CTTEEEEECCTTCGGGG
T ss_pred             CCCEEEEeccCCCHHHHHHHHHhC-CCCEEEEEeCcHHHHHHHHHHHHh--------------cCCceEEEEECCCcccc
Confidence            5678888874 5666667666443 335799999999877776554332              26788899999998888


Q ss_pred             HHHhcCCCEEEEccc
Q 016901          158 EPALGNASVVICCIG  172 (380)
Q Consensus       158 ~~a~~~~d~Vi~~Ag  172 (380)
                      ......+|+|++...
T Consensus       138 ~~~~~~vD~i~~d~~  152 (227)
T d1g8aa_         138 RALVPKVDVIFEDVA  152 (227)
T ss_dssp             TTTCCCEEEEEECCC
T ss_pred             cccccceEEEEEEcc
Confidence            777778899988653

>d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermotoga maritima [TaxId: 2336]

Probab=80.77  E-value=6.6  Score=30.48  Aligned_cols=103  Identities=14%  Similarity=0.070  Sum_probs=58.0

Q ss_pred             eEEEEcCCChHHHHHHHHHHHC---CCeEEEEeCCchhHHHHHHHHHhhhhcccccccCCCCCCceEE------------
Q 016901           82 LAFVAGATGKVGSRTVRELLKL---GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLEL------------  146 (380)
Q Consensus        82 ~vlVtGatG~iG~~lv~~Ll~~---G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~------------  146 (380)
                      +|.|-| =|.||+.+.+.++++   +.+|+++.. ....+.+...++.--       ....+...+++            
T Consensus         2 kIgING-fGRIGR~v~R~~~~~~~~~i~vvaINd-~~~~e~~ayLlkyDS-------~hG~~~~~v~~~~~~l~ing~~I   72 (169)
T d1hdgo1           2 RVAING-FGRIGRLVYRIIYERKNPDIEVVAIND-LTDTKTLAHLLKYDS-------VHKKFPGKVEYTENSLIVDGKEI   72 (169)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHTCTTCEEEEEEC-SSCHHHHHHHHHCCT-------TTCCCSSCEEECSSEEEETTEEE
T ss_pred             EEEEEC-CChHHHHHHHHHHhccCCCEEEEEecc-CccHHHHHHHHhccc-------cccccCceEEEECCEEEECCEEE
Confidence            578888 999999999999875   367777754 344555554443211       11111122221            


Q ss_pred             EEcCCCChhcHHHHhcCCCEEEEccccCccccCCCCCcchhhHHHHHHHHHHHHHcCCCEEEE
Q 016901          147 VECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIM  209 (380)
Q Consensus       147 ~~~Dl~d~~~~~~a~~~~d~Vi~~Ag~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~v~r~V~  209 (380)
                      ....-.+++++.-.-.++|+||-|.|....                ..-++.-.+.|++++|.
T Consensus        73 ~~~~~~~p~~i~W~~~gvD~ViEcTG~f~t----------------~~~~~~hl~~GakkVii  119 (169)
T d1hdgo1          73 KVFAEPDPSKLPWKDLGVDFVIESTGVFRN----------------REKAELHLQAGAKKVII  119 (169)
T ss_dssp             EEECCSSGGGSCHHHHTCCEEEECSSSCCB----------------HHHHTHHHHTTCSEEEE
T ss_pred             EEEeCCChhhCCccccCCCEEEEecceecc----------------ccchhhhccCCCceEEE
Confidence            111223455444222479999999986531                11222233568888876

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=80.58  E-value=0.81  Score=37.72  Aligned_cols=32  Identities=19%  Similarity=0.108  Sum_probs=29.6

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEeCCch
Q 016901           83 AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ  115 (380)
Q Consensus        83 vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~  115 (380)
                      |+|.| +|..|...+..|+++|++|.++.++..
T Consensus         5 ViIIG-aG~aGl~aA~~la~~G~~V~liEk~~~   36 (251)
T d2i0za1           5 VIVIG-GGPSGLMAAIGAAEEGANVLLLDKGNK   36 (251)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            89999 899999999999999999999998764

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=80.53  E-value=0.87  Score=39.33  Aligned_cols=34  Identities=24%  Similarity=0.188  Sum_probs=30.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCch
Q 016901           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ  115 (380)
Q Consensus        81 ~~vlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~  115 (380)
                      -.|+|.| +|+.|..++.+|.++|.+|+++.++++
T Consensus         8 ~dV~IIG-AG~sGl~~a~~L~~~G~~v~i~Ek~~~   41 (298)
T d1w4xa1           8 VDVLVVG-AGFSGLYALYRLRELGRSVHVIETAGD   41 (298)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             CCEEEEC-ccHHHHHHHHHHHhCCCCEEEEEcCCC
Confidence            4699999 899999999999999999999988754

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=80.31  E-value=0.87  Score=40.61  Aligned_cols=32  Identities=19%  Similarity=0.202  Sum_probs=24.2

Q ss_pred             CeEEEEcC------CChHH---HHHHHHHHHCCCeEEEEeC
Q 016901           81 NLAFVAGA------TGKVG---SRTVRELLKLGFRVRAGVR  112 (380)
Q Consensus        81 ~~vlVtGa------tG~iG---~~lv~~Ll~~G~~V~~l~R  112 (380)
                      |+||+.+.      +|++|   ..|+++|.++||+|++++.
T Consensus         1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~Gh~V~Vvtp   41 (437)
T d2bisa1           1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTP   41 (437)
T ss_dssp             CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CEEEEECCccCCcccCCHHHHHHHHHHHHHHcCCEEEEEec
Confidence            56777664      46666   5568899999999999873