Query 016902
Match_columns 380
No_of_seqs 375 out of 3002
Neff 8.4
Searched_HMMs 46136
Date Fri Mar 29 03:50:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016902.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016902hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1237 H+/oligopeptide sympor 100.0 9.3E-48 2E-52 390.3 25.0 321 49-380 15-341 (571)
2 TIGR00926 2A1704 Peptide:H+ sy 100.0 1.9E-28 4.2E-33 253.3 21.7 238 83-380 1-245 (654)
3 COG3104 PTR2 Dipeptide/tripept 99.9 9.1E-26 2E-30 220.4 17.2 192 65-286 17-212 (498)
4 PRK10207 dipeptide/tripeptide 99.9 2E-23 4.2E-28 211.3 23.2 190 65-285 10-199 (489)
5 TIGR00924 yjdL_sub1_fam amino 99.9 4.8E-22 1E-26 200.7 23.2 193 65-288 6-200 (475)
6 PRK15462 dipeptide/tripeptide 99.9 3.3E-21 7.2E-26 193.6 23.6 189 66-285 6-194 (493)
7 PRK09584 tppB putative tripept 99.9 3E-20 6.4E-25 188.8 23.7 189 66-285 18-206 (500)
8 PF00854 PTR2: POT family; In 99.9 3.2E-22 7E-27 195.8 8.1 212 136-380 1-215 (372)
9 PRK03545 putative arabinose tr 99.7 4.9E-16 1.1E-20 152.7 23.3 178 65-278 5-182 (390)
10 PRK15403 multidrug efflux syst 99.7 6.6E-16 1.4E-20 153.3 24.0 180 95-309 41-220 (413)
11 PRK10054 putative transporter; 99.7 9.7E-16 2.1E-20 151.2 22.6 173 68-276 6-178 (395)
12 TIGR02332 HpaX 4-hydroxyphenyl 99.7 7E-16 1.5E-20 153.1 21.6 178 65-278 4-187 (412)
13 KOG1330 Sugar transporter/spin 99.7 1.5E-17 3.2E-22 161.1 8.1 210 66-311 30-248 (493)
14 PRK14995 methyl viologen resis 99.7 1.4E-15 3.1E-20 154.5 22.4 177 67-279 4-181 (495)
15 PF07690 MFS_1: Major Facilita 99.7 1.4E-15 3E-20 145.8 20.3 165 76-275 3-167 (352)
16 PRK10213 nepI ribonucleoside t 99.7 3.7E-15 8E-20 147.0 23.5 177 63-275 14-190 (394)
17 COG2814 AraJ Arabinose efflux 99.7 5.2E-15 1.1E-19 143.3 23.6 181 65-281 9-189 (394)
18 PRK15402 multidrug efflux syst 99.7 2.5E-15 5.3E-20 148.4 21.8 166 77-278 21-186 (406)
19 TIGR00710 efflux_Bcr_CflA drug 99.7 4E-15 8.6E-20 144.9 23.0 178 68-281 4-181 (385)
20 TIGR00900 2A0121 H+ Antiporter 99.7 3.1E-15 6.8E-20 144.0 21.5 173 74-277 4-176 (365)
21 PRK11646 multidrug resistance 99.7 7.4E-15 1.6E-19 145.2 23.7 169 72-276 13-181 (400)
22 TIGR00891 2A0112 putative sial 99.7 8.1E-15 1.8E-19 143.4 23.4 174 63-272 6-181 (405)
23 PRK10504 putative transporter; 99.7 5.3E-15 1.2E-19 148.9 22.5 176 68-279 9-184 (471)
24 PRK12382 putative transporter; 99.7 7.3E-15 1.6E-19 144.3 22.9 172 71-269 17-188 (392)
25 PRK11652 emrD multidrug resist 99.7 7.3E-15 1.6E-19 144.4 22.5 174 66-275 5-178 (394)
26 PRK11551 putative 3-hydroxyphe 99.7 8.1E-15 1.7E-19 144.5 22.2 176 65-276 11-186 (406)
27 TIGR00903 2A0129 major facilit 99.7 8.9E-15 1.9E-19 143.1 22.0 156 88-279 9-164 (368)
28 TIGR01299 synapt_SV2 synaptic 99.7 3.2E-15 7E-20 157.1 19.6 156 88-278 185-353 (742)
29 TIGR00886 2A0108 nitrite extru 99.7 2.1E-14 4.6E-19 139.1 22.5 164 71-270 3-178 (366)
30 PRK05122 major facilitator sup 99.7 1.5E-14 3.3E-19 142.3 21.7 177 68-271 14-190 (399)
31 PRK12307 putative sialic acid 99.6 1.3E-14 2.9E-19 143.8 21.2 167 66-268 15-181 (426)
32 TIGR00711 efflux_EmrB drug res 99.6 7.2E-15 1.5E-19 148.0 19.2 173 71-279 4-176 (485)
33 PRK11663 regulatory protein Uh 99.6 1.7E-14 3.7E-19 144.0 21.4 167 70-272 24-190 (434)
34 PRK10406 alpha-ketoglutarate t 99.6 5E-14 1.1E-18 140.6 23.6 178 67-272 20-211 (432)
35 PLN00028 nitrate transmembrane 99.6 1.1E-13 2.5E-18 139.8 26.5 175 67-278 34-217 (476)
36 PRK10091 MFS transport protein 99.6 2.3E-14 5E-19 140.5 20.8 176 70-281 4-179 (382)
37 PRK03893 putative sialic acid 99.6 3.4E-14 7.5E-19 143.8 22.7 169 65-269 16-184 (496)
38 TIGR00895 2A0115 benzoate tran 99.6 1.9E-14 4.1E-19 140.2 18.8 175 65-275 13-187 (398)
39 PRK10473 multidrug efflux syst 99.6 8.7E-14 1.9E-18 136.7 23.5 166 77-278 11-176 (392)
40 TIGR00890 2A0111 Oxalate/Forma 99.6 3.9E-14 8.4E-19 136.8 20.1 152 90-277 23-174 (377)
41 PRK11043 putative transporter; 99.6 8.7E-14 1.9E-18 137.1 22.8 149 95-278 31-179 (401)
42 PRK03699 putative transporter; 99.6 1.1E-13 2.4E-18 136.3 23.5 175 65-275 3-178 (394)
43 PRK11102 bicyclomycin/multidru 99.6 5.4E-14 1.2E-18 137.0 20.3 155 88-278 10-164 (377)
44 PRK09874 drug efflux system pr 99.6 2.9E-13 6.4E-18 133.1 24.6 171 71-278 16-191 (408)
45 TIGR00893 2A0114 d-galactonate 99.6 3.4E-14 7.4E-19 137.6 17.6 153 91-278 15-167 (399)
46 PRK09705 cynX putative cyanate 99.6 1.2E-13 2.5E-18 136.3 21.0 151 86-273 26-177 (393)
47 TIGR00805 oat sodium-independe 99.6 2.7E-14 5.8E-19 148.9 16.8 208 65-279 28-280 (633)
48 PRK10642 proline/glycine betai 99.6 1.7E-13 3.6E-18 139.1 22.0 175 68-270 15-203 (490)
49 TIGR00897 2A0118 polyol permea 99.6 2.3E-13 5.1E-18 134.4 22.4 172 65-268 9-181 (402)
50 cd06174 MFS The Major Facilita 99.6 1.5E-13 3.3E-18 131.0 20.1 168 73-276 3-170 (352)
51 PRK10133 L-fucose transporter; 99.6 6.5E-13 1.4E-17 133.0 25.1 153 67-252 24-176 (438)
52 TIGR00879 SP MFS transporter, 99.6 1E-13 2.2E-18 138.0 18.9 151 94-276 52-213 (481)
53 PRK10642 proline/glycine betai 99.6 3.5E-13 7.7E-18 136.7 22.7 179 67-278 248-428 (490)
54 TIGR00899 2A0120 sugar efflux 99.6 3.1E-13 6.7E-18 131.2 20.9 168 76-278 4-174 (375)
55 PRK10077 xylE D-xylose transpo 99.6 2.1E-13 4.5E-18 137.4 20.3 152 101-276 51-211 (479)
56 TIGR00885 fucP L-fucose:H+ sym 99.6 8.2E-13 1.8E-17 131.1 23.7 173 71-276 5-203 (410)
57 PRK11195 lysophospholipid tran 99.6 5.7E-13 1.2E-17 131.4 22.1 164 71-274 5-168 (393)
58 PRK10489 enterobactin exporter 99.6 2.3E-13 5.1E-18 134.9 19.0 170 77-277 25-194 (417)
59 TIGR00892 2A0113 monocarboxyla 99.5 3.8E-13 8.2E-18 135.3 20.4 151 93-279 42-193 (455)
60 TIGR00881 2A0104 phosphoglycer 99.5 7.4E-14 1.6E-18 134.9 14.8 152 91-277 16-168 (379)
61 PRK03633 putative MFS family t 99.5 7.4E-13 1.6E-17 129.8 21.6 152 69-256 6-157 (381)
62 PRK15034 nitrate/nitrite trans 99.5 1.9E-12 4.2E-17 129.2 24.6 195 52-279 14-231 (462)
63 PRK09556 uhpT sugar phosphate 99.5 9.9E-13 2.2E-17 132.6 22.0 176 69-277 258-446 (467)
64 PRK09556 uhpT sugar phosphate 99.5 7.4E-14 1.6E-18 140.7 12.9 154 92-275 51-207 (467)
65 PRK11273 glpT sn-glycerol-3-ph 99.5 7.8E-13 1.7E-17 132.8 20.0 153 91-275 50-203 (452)
66 PRK09952 shikimate transporter 99.5 1.9E-12 4.1E-17 129.5 22.6 178 66-271 19-211 (438)
67 PRK15075 citrate-proton sympor 99.5 1.6E-12 3.4E-17 129.9 21.4 175 65-267 11-199 (434)
68 TIGR00887 2A0109 phosphate:H+ 99.5 2.1E-12 4.6E-17 131.4 22.7 179 67-275 14-220 (502)
69 COG2271 UhpC Sugar phosphate p 99.5 5.3E-13 1.1E-17 128.6 16.9 178 69-278 252-432 (448)
70 PRK15011 sugar efflux transpor 99.5 3.9E-12 8.5E-17 125.3 23.2 165 79-279 226-390 (393)
71 TIGR00894 2A0114euk Na(+)-depe 99.5 6.5E-13 1.4E-17 133.6 17.0 146 99-277 70-216 (465)
72 PRK15011 sugar efflux transpor 99.5 6.5E-12 1.4E-16 123.7 23.6 173 71-278 17-192 (393)
73 TIGR00712 glpT glycerol-3-phos 99.5 1.2E-12 2.5E-17 130.9 18.0 155 92-278 49-204 (438)
74 PRK09528 lacY galactoside perm 99.5 1.6E-12 3.4E-17 129.1 18.3 181 70-280 11-191 (420)
75 PRK03699 putative transporter; 99.5 3.8E-12 8.1E-17 125.4 20.8 173 70-278 206-378 (394)
76 TIGR00898 2A0119 cation transp 99.5 1.1E-12 2.4E-17 133.2 17.3 147 94-278 113-262 (505)
77 PRK09952 shikimate transporter 99.5 7.5E-12 1.6E-16 125.2 22.9 181 67-278 248-431 (438)
78 TIGR01299 synapt_SV2 synaptic 99.5 4.7E-12 1E-16 133.4 22.0 132 111-278 601-732 (742)
79 PRK05122 major facilitator sup 99.5 6.7E-12 1.5E-16 123.5 21.9 171 80-288 227-397 (399)
80 TIGR00806 rfc RFC reduced fola 99.5 5.8E-12 1.3E-16 124.5 21.1 173 68-279 25-202 (511)
81 PRK08633 2-acyl-glycerophospho 99.5 4.1E-12 8.8E-17 141.3 22.6 154 70-255 10-165 (1146)
82 cd06174 MFS The Major Facilita 99.5 6.3E-12 1.4E-16 119.9 20.9 171 72-277 178-349 (352)
83 TIGR00890 2A0111 Oxalate/Forma 99.5 4E-12 8.6E-17 122.7 19.1 168 72-273 208-375 (377)
84 TIGR00882 2A0105 oligosacchari 99.5 7.1E-12 1.5E-16 123.4 20.4 178 70-277 3-180 (396)
85 PF06609 TRI12: Fungal trichot 99.4 3.3E-12 7E-17 130.5 18.0 151 90-277 64-214 (599)
86 PRK11273 glpT sn-glycerol-3-ph 99.4 8.3E-12 1.8E-16 125.3 20.2 178 69-278 253-433 (452)
87 TIGR00899 2A0120 sugar efflux 99.4 1.7E-11 3.8E-16 118.9 21.6 157 85-277 215-371 (375)
88 TIGR00883 2A0106 metabolite-pr 99.4 2.7E-12 6E-17 124.6 15.8 169 70-270 220-391 (394)
89 TIGR00896 CynX cyanate transpo 99.4 4E-12 8.6E-17 123.2 16.6 146 90-272 20-167 (355)
90 KOG0255 Synaptic vesicle trans 99.4 4.4E-12 9.6E-17 129.6 17.1 141 97-275 110-250 (521)
91 PRK11551 putative 3-hydroxyphe 99.4 2.9E-11 6.2E-16 119.2 21.9 167 74-276 225-392 (406)
92 PRK11010 ampG muropeptide tran 99.4 4.5E-11 9.7E-16 121.4 23.7 177 68-278 11-193 (491)
93 KOG0254 Predicted transporter 99.4 1.3E-11 2.8E-16 126.1 19.7 134 106-275 90-225 (513)
94 PRK06814 acylglycerophosphoeth 99.4 2.2E-11 4.8E-16 135.6 23.0 146 97-274 43-189 (1140)
95 TIGR00901 2A0125 AmpG-related 99.4 2.8E-11 6E-16 117.3 20.8 158 88-278 6-176 (356)
96 COG2271 UhpC Sugar phosphate p 99.4 4.1E-12 8.9E-17 122.5 14.3 171 72-277 28-203 (448)
97 PRK09874 drug efflux system pr 99.4 2.8E-11 6E-16 119.1 20.6 163 82-279 232-397 (408)
98 PRK11663 regulatory protein Uh 99.4 3.2E-11 6.8E-16 120.5 20.9 179 70-280 244-424 (434)
99 PRK03893 putative sialic acid 99.4 1.9E-11 4.2E-16 123.7 19.7 150 87-269 293-442 (496)
100 COG2223 NarK Nitrate/nitrite t 99.4 1.7E-11 3.6E-16 118.3 18.0 194 65-293 10-206 (417)
101 PRK11902 ampG muropeptide tran 99.4 7.7E-11 1.7E-15 116.4 23.3 167 75-275 5-177 (402)
102 COG0738 FucP Fucose permease [ 99.4 6.8E-11 1.5E-15 113.5 21.2 159 88-278 31-208 (422)
103 TIGR00893 2A0114 d-galactonate 99.4 4.8E-11 1.1E-15 115.5 20.7 180 69-277 215-396 (399)
104 TIGR00891 2A0112 putative sial 99.4 2.2E-11 4.8E-16 119.1 18.2 165 66-264 235-400 (405)
105 PRK09705 cynX putative cyanate 99.4 6.9E-11 1.5E-15 116.5 21.7 175 71-281 207-382 (393)
106 PRK15075 citrate-proton sympor 99.4 5.4E-11 1.2E-15 118.8 21.1 153 75-259 244-398 (434)
107 PRK10489 enterobactin exporter 99.4 5E-11 1.1E-15 118.2 20.3 160 85-279 239-398 (417)
108 TIGR00880 2_A_01_02 Multidrug 99.4 6.6E-12 1.4E-16 103.5 11.8 131 113-278 6-136 (141)
109 TIGR00889 2A0110 nucleoside tr 99.4 4.7E-11 1E-15 118.8 19.8 172 77-280 216-402 (418)
110 PRK03545 putative arabinose tr 99.4 1.5E-10 3.3E-15 113.7 22.9 169 75-279 211-379 (390)
111 PRK09528 lacY galactoside perm 99.4 2.3E-11 4.9E-16 120.8 17.0 155 88-277 242-400 (420)
112 PRK12382 putative transporter; 99.4 7.2E-11 1.6E-15 115.9 20.2 160 81-278 228-387 (392)
113 TIGR00902 2A0127 phenyl propri 99.4 1.2E-10 2.5E-15 114.4 21.5 159 74-270 9-169 (382)
114 TIGR00897 2A0118 polyol permea 99.3 2.1E-10 4.5E-15 113.4 22.9 175 71-278 224-399 (402)
115 PTZ00207 hypothetical protein; 99.3 2.1E-10 4.5E-15 117.8 23.3 173 65-272 24-197 (591)
116 PRK03633 putative MFS family t 99.3 1.5E-10 3.3E-15 113.4 21.4 153 84-275 215-367 (381)
117 TIGR01301 GPH_sucrose GPH fami 99.3 1.7E-10 3.7E-15 116.0 22.0 197 71-284 6-222 (477)
118 PRK10406 alpha-ketoglutarate t 99.3 2.2E-10 4.8E-15 114.3 22.4 169 78-278 252-422 (432)
119 TIGR00902 2A0127 phenyl propri 99.3 2.9E-10 6.2E-15 111.6 22.7 169 69-275 205-374 (382)
120 KOG3764 Vesicular amine transp 99.3 5.9E-12 1.3E-16 120.2 10.2 166 99-298 100-268 (464)
121 KOG0569 Permease of the major 99.3 5.8E-11 1.3E-15 118.5 17.8 139 108-278 63-203 (485)
122 TIGR00879 SP MFS transporter, 99.3 7.5E-11 1.6E-15 117.4 18.8 165 91-279 305-469 (481)
123 PF11700 ATG22: Vacuole efflux 99.3 2.6E-10 5.7E-15 115.0 22.5 184 68-278 280-466 (477)
124 TIGR00792 gph sugar (Glycoside 99.3 8.2E-11 1.8E-15 117.0 18.8 176 79-281 9-195 (437)
125 PRK11128 putative 3-phenylprop 99.3 1.4E-10 3.1E-15 113.7 20.1 153 82-274 17-173 (382)
126 PRK11010 ampG muropeptide tran 99.3 3.5E-10 7.5E-15 115.0 23.2 171 79-280 232-403 (491)
127 TIGR00883 2A0106 metabolite-pr 99.3 1.5E-10 3.3E-15 112.4 19.1 130 119-275 49-186 (394)
128 TIGR00712 glpT glycerol-3-phos 99.3 1.3E-10 2.9E-15 116.1 18.2 180 70-279 252-432 (438)
129 TIGR00892 2A0113 monocarboxyla 99.3 9.8E-11 2.1E-15 117.8 17.2 172 70-276 242-417 (455)
130 KOG2532 Permease of the major 99.3 4.6E-11 1E-15 119.9 14.7 149 98-279 66-215 (466)
131 PF05977 MFS_3: Transmembrane 99.3 5.2E-10 1.1E-14 114.0 21.3 178 73-281 14-191 (524)
132 TIGR01272 gluP glucose/galacto 99.3 6E-10 1.3E-14 106.5 20.6 165 68-270 139-305 (310)
133 KOG4686 Predicted sugar transp 99.2 4.1E-10 8.9E-15 103.2 16.6 173 61-270 256-432 (459)
134 TIGR02332 HpaX 4-hydroxyphenyl 99.2 3.1E-10 6.7E-15 112.7 16.7 164 70-268 243-409 (412)
135 TIGR00788 fbt folate/biopterin 99.2 1.3E-09 2.7E-14 110.2 20.7 171 71-275 28-204 (468)
136 PRK12307 putative sialic acid 99.2 1.9E-09 4.2E-14 106.9 21.6 146 84-263 246-391 (426)
137 PLN00028 nitrate transmembrane 99.2 7.4E-10 1.6E-14 112.1 18.9 174 72-280 255-433 (476)
138 PRK15402 multidrug efflux syst 99.2 4E-09 8.7E-14 104.1 23.5 167 72-269 218-384 (406)
139 COG2814 AraJ Arabinose efflux 99.2 2.6E-09 5.6E-14 103.9 21.5 179 70-284 212-390 (394)
140 PRK09669 putative symporter Ya 99.2 8.7E-10 1.9E-14 110.4 18.8 185 68-279 8-203 (444)
141 TIGR00894 2A0114euk Na(+)-depe 99.2 2.2E-09 4.7E-14 108.0 21.6 179 67-278 259-448 (465)
142 COG2223 NarK Nitrate/nitrite t 99.2 6.6E-10 1.4E-14 107.3 16.4 183 69-280 218-401 (417)
143 TIGR00881 2A0104 phosphoglycer 99.2 7.2E-10 1.6E-14 107.0 16.9 161 70-262 217-379 (379)
144 PRK10504 putative transporter; 99.2 3.6E-09 7.7E-14 106.6 22.2 156 71-258 263-418 (471)
145 TIGR00900 2A0121 H+ Antiporter 99.2 1.5E-09 3.2E-14 104.4 18.3 153 71-257 212-365 (365)
146 TIGR00711 efflux_EmrB drug res 99.2 1.2E-09 2.7E-14 109.9 18.2 155 71-256 257-411 (485)
147 PRK10091 MFS transport protein 99.2 4.4E-09 9.4E-14 103.2 21.4 165 78-278 208-374 (382)
148 PRK11128 putative 3-phenylprop 99.2 6.9E-09 1.5E-13 101.8 22.1 165 71-273 207-372 (382)
149 TIGR00882 2A0105 oligosacchari 99.2 3E-09 6.5E-14 104.7 19.6 163 78-275 224-390 (396)
150 PF00083 Sugar_tr: Sugar (and 99.2 4.1E-13 8.9E-18 134.3 -8.1 136 106-273 47-185 (451)
151 TIGR00792 gph sugar (Glycoside 99.2 2.7E-09 5.9E-14 106.1 19.4 160 70-258 223-383 (437)
152 TIGR00895 2A0115 benzoate tran 99.1 2.1E-09 4.6E-14 104.6 18.1 149 68-252 249-397 (398)
153 KOG2615 Permease of the major 99.1 4.7E-10 1E-14 106.8 12.7 116 103-254 66-181 (451)
154 PRK10077 xylE D-xylose transpo 99.1 6.1E-09 1.3E-13 104.9 21.4 154 94-278 295-455 (479)
155 TIGR00887 2A0109 phosphate:H+ 99.1 1.6E-09 3.6E-14 110.2 16.9 169 75-275 294-484 (502)
156 TIGR00710 efflux_Bcr_CflA drug 99.1 1.2E-08 2.6E-13 99.2 22.3 157 76-264 213-370 (385)
157 PRK10133 L-fucose transporter; 99.1 5.5E-09 1.2E-13 104.7 20.3 162 76-275 265-428 (438)
158 TIGR02718 sider_RhtX_FptX side 99.1 1E-08 2.2E-13 100.7 21.7 171 74-274 213-385 (390)
159 PRK10429 melibiose:sodium symp 99.1 7.3E-09 1.6E-13 104.7 20.4 179 75-281 12-202 (473)
160 PRK14995 methyl viologen resis 99.1 3.7E-09 7.9E-14 107.5 18.2 153 71-255 261-413 (495)
161 PRK08633 2-acyl-glycerophospho 99.1 5.4E-09 1.2E-13 116.5 20.8 160 74-268 237-398 (1146)
162 PRK15034 nitrate/nitrite trans 99.1 1.2E-08 2.7E-13 102.0 20.8 183 71-278 254-452 (462)
163 TIGR00889 2A0110 nucleoside tr 99.1 1.9E-08 4.2E-13 100.1 21.6 160 73-274 6-174 (418)
164 PRK11462 putative transporter; 99.1 2.4E-08 5.2E-13 100.7 22.1 208 72-309 12-230 (460)
165 PRK11902 ampG muropeptide tran 99.1 3.5E-08 7.6E-13 97.4 22.8 153 91-278 231-388 (402)
166 COG2270 Permeases of the major 99.1 5.8E-09 1.3E-13 101.0 16.3 166 77-277 260-426 (438)
167 PF05977 MFS_3: Transmembrane 99.1 1.8E-08 3.9E-13 102.8 20.6 165 78-277 227-391 (524)
168 PRK10213 nepI ribonucleoside t 99.0 5.9E-08 1.3E-12 95.7 23.2 165 71-271 218-382 (394)
169 KOG2504 Monocarboxylate transp 99.0 2.8E-09 6.1E-14 108.3 13.9 174 72-281 45-222 (509)
170 PRK09848 glucuronide transport 99.0 1.9E-08 4.1E-13 100.9 19.6 161 71-258 230-391 (448)
171 TIGR00896 CynX cyanate transpo 99.0 1.6E-08 3.4E-13 97.9 18.4 152 71-257 199-350 (355)
172 PRK10054 putative transporter; 99.0 1.2E-08 2.6E-13 100.7 17.6 171 72-277 209-381 (395)
173 PRK11646 multidrug resistance 99.0 2.2E-08 4.8E-13 99.0 19.2 154 88-276 227-384 (400)
174 TIGR02718 sider_RhtX_FptX side 99.0 6.9E-08 1.5E-12 94.8 22.5 177 71-279 3-183 (390)
175 TIGR00898 2A0119 cation transp 99.0 1.5E-08 3.3E-13 102.9 17.5 130 113-277 363-492 (505)
176 COG2807 CynX Cyanate permease 99.0 8.2E-08 1.8E-12 91.3 20.6 174 68-279 11-185 (395)
177 PF13347 MFS_2: MFS/sugar tran 99.0 2.5E-09 5.5E-14 106.5 11.2 178 79-282 11-200 (428)
178 PRK06814 acylglycerophosphoeth 99.0 1.9E-08 4.2E-13 112.2 19.1 183 71-268 227-410 (1140)
179 PF13347 MFS_2: MFS/sugar tran 99.0 1.5E-08 3.3E-13 101.0 16.2 162 69-258 225-387 (428)
180 TIGR00903 2A0129 major facilit 99.0 5.9E-08 1.3E-12 95.0 19.9 166 69-276 192-361 (368)
181 PRK09848 glucuronide transport 99.0 8.6E-08 1.9E-12 96.1 21.0 157 68-251 7-173 (448)
182 KOG0252 Inorganic phosphate tr 99.0 4.5E-09 9.7E-14 102.4 11.1 140 102-269 81-235 (538)
183 PRK10429 melibiose:sodium symp 98.9 4.7E-08 1E-12 98.9 18.4 165 69-258 231-396 (473)
184 COG2807 CynX Cyanate permease 98.9 1.2E-07 2.5E-12 90.3 19.5 168 70-272 209-377 (395)
185 KOG2532 Permease of the major 98.9 3.9E-08 8.5E-13 98.8 17.0 184 67-279 256-446 (466)
186 KOG0569 Permease of the major 98.9 1.1E-07 2.4E-12 95.1 19.7 186 68-283 268-457 (485)
187 KOG2533 Permease of the major 98.9 1.8E-08 3.8E-13 101.8 13.7 147 97-278 73-225 (495)
188 PRK11195 lysophospholipid tran 98.9 2.4E-07 5.2E-12 91.4 21.1 154 86-275 222-375 (393)
189 PRK11043 putative transporter; 98.9 4.7E-07 1E-11 89.1 23.3 148 82-261 216-363 (401)
190 KOG0253 Synaptic vesicle trans 98.9 7E-08 1.5E-12 91.8 15.8 187 90-314 98-284 (528)
191 TIGR00901 2A0125 AmpG-related 98.9 8.4E-08 1.8E-12 92.8 17.2 144 71-239 211-355 (356)
192 PRK09669 putative symporter Ya 98.9 2E-07 4.3E-12 93.4 20.1 124 108-258 267-391 (444)
193 PF05631 DUF791: Protein of un 98.9 4.7E-07 1E-11 86.6 21.1 155 93-279 57-215 (354)
194 PF07690 MFS_1: Major Facilita 98.9 8.5E-08 1.8E-12 91.8 15.9 141 74-246 211-352 (352)
195 PRK11102 bicyclomycin/multidru 98.9 7.6E-07 1.6E-11 86.6 22.8 143 76-250 201-344 (377)
196 KOG2325 Predicted transporter/ 98.8 1E-07 2.2E-12 95.0 14.5 191 61-282 26-231 (488)
197 KOG2504 Monocarboxylate transp 98.8 8.9E-08 1.9E-12 97.4 14.5 178 69-280 298-476 (509)
198 TIGR00885 fucP L-fucose:H+ sym 98.8 4.3E-07 9.4E-12 90.2 19.1 161 74-272 237-404 (410)
199 PRK10473 multidrug efflux syst 98.8 2.3E-06 4.9E-11 84.0 23.8 68 88-156 222-289 (392)
200 KOG0253 Synaptic vesicle trans 98.8 2.2E-07 4.9E-12 88.4 15.1 171 68-275 325-514 (528)
201 COG2211 MelB Na+/melibiose sym 98.8 9.3E-07 2E-11 87.9 20.1 215 69-310 12-239 (467)
202 PF01306 LacY_symp: LacY proto 98.7 5.4E-07 1.2E-11 88.6 16.2 179 70-280 8-188 (412)
203 PRK11462 putative transporter; 98.7 2.4E-06 5.2E-11 86.2 21.1 154 77-258 236-390 (460)
204 COG2211 MelB Na+/melibiose sym 98.7 9.6E-07 2.1E-11 87.9 17.3 158 71-255 238-396 (467)
205 PF01306 LacY_symp: LacY proto 98.7 3.3E-06 7.1E-11 83.1 20.8 176 68-278 219-398 (412)
206 TIGR00886 2A0108 nitrite extru 98.7 3E-07 6.6E-12 88.9 12.8 138 72-241 228-365 (366)
207 PRK11652 emrD multidrug resist 98.6 7.3E-06 1.6E-10 80.5 22.7 139 89-260 227-365 (394)
208 PF03825 Nuc_H_symport: Nucleo 98.6 1E-05 2.2E-10 80.1 22.3 173 77-279 215-394 (400)
209 TIGR00924 yjdL_sub1_fam amino 98.6 3.6E-06 7.8E-11 85.3 19.1 187 71-282 274-470 (475)
210 PF06813 Nodulin-like: Nodulin 98.6 7.5E-06 1.6E-10 75.5 19.2 153 68-252 2-154 (250)
211 PF03825 Nuc_H_symport: Nucleo 98.5 3.2E-05 6.9E-10 76.6 23.1 115 74-217 7-121 (400)
212 PF03209 PUCC: PUCC protein; 98.5 2.6E-05 5.6E-10 76.0 19.8 165 81-276 220-394 (403)
213 COG0477 ProP Permeases of the 98.4 2.7E-05 5.9E-10 71.3 18.9 144 94-269 26-174 (338)
214 PF03137 OATP: Organic Anion T 98.4 3.2E-08 6.9E-13 101.4 -1.2 204 73-284 7-254 (539)
215 KOG3626 Organic anion transpor 98.4 3.6E-06 7.8E-11 87.5 13.6 200 77-284 105-347 (735)
216 PRK15403 multidrug efflux syst 98.4 5.8E-05 1.2E-09 75.0 21.7 167 71-269 220-386 (413)
217 PF03092 BT1: BT1 family; Int 98.4 1.1E-05 2.3E-10 80.9 16.3 159 92-279 12-174 (433)
218 PRK10207 dipeptide/tripeptide 98.4 2.1E-05 4.5E-10 80.0 17.6 177 80-282 280-478 (489)
219 KOG2816 Predicted transporter 98.3 1.6E-05 3.5E-10 79.9 15.3 158 89-284 41-203 (463)
220 PF03209 PUCC: PUCC protein; 98.3 5.7E-05 1.2E-09 73.6 18.4 141 97-257 7-153 (403)
221 PRK09584 tppB putative tripept 98.3 5.4E-05 1.2E-09 77.3 19.3 131 126-282 341-481 (500)
222 KOG2563 Permease of the major 98.3 4.7E-05 1E-09 74.7 16.4 164 61-253 37-200 (480)
223 COG0738 FucP Fucose permease [ 98.2 7.4E-05 1.6E-09 72.4 17.5 156 76-269 243-399 (422)
224 KOG2533 Permease of the major 98.2 1.3E-05 2.7E-10 81.2 12.5 162 70-264 274-440 (495)
225 KOG3764 Vesicular amine transp 98.1 8.1E-06 1.7E-10 78.8 8.1 166 88-280 289-454 (464)
226 TIGR00788 fbt folate/biopterin 98.1 1.6E-05 3.5E-10 80.4 10.1 136 97-257 280-415 (468)
227 TIGR01301 GPH_sucrose GPH fami 98.1 0.00039 8.4E-09 70.3 19.7 205 65-282 254-473 (477)
228 KOG0252 Inorganic phosphate tr 98.1 6.2E-06 1.3E-10 80.9 5.9 179 69-279 304-497 (538)
229 KOG0254 Predicted transporter 98.0 0.00021 4.5E-09 73.2 16.9 146 65-233 290-435 (513)
230 PF11700 ATG22: Vacuole efflux 98.0 0.0013 2.8E-08 66.7 21.8 173 108-307 73-277 (477)
231 PTZ00207 hypothetical protein; 98.0 9.6E-05 2.1E-09 76.4 12.8 173 70-280 354-552 (591)
232 PF12832 MFS_1_like: MFS_1 lik 97.9 0.0002 4.3E-09 53.6 9.9 66 78-145 9-74 (77)
233 TIGR00805 oat sodium-independe 97.9 0.00077 1.7E-08 70.8 17.7 82 70-152 331-415 (633)
234 PF00083 Sugar_tr: Sugar (and 97.8 4.6E-08 1E-12 97.8 -13.8 185 70-282 253-438 (451)
235 PF05978 UNC-93: Ion channel r 97.8 0.0011 2.4E-08 56.7 15.0 106 108-249 40-145 (156)
236 PF06609 TRI12: Fungal trichot 97.8 0.00058 1.2E-08 70.5 15.4 155 66-253 307-465 (599)
237 KOG3762 Predicted transporter 97.7 0.00026 5.6E-09 71.0 11.1 157 88-280 390-547 (618)
238 TIGR01272 gluP glucose/galacto 97.5 0.0006 1.3E-08 65.1 10.4 86 185-276 8-109 (310)
239 PRK03612 spermidine synthase; 97.5 0.018 3.9E-07 59.1 21.5 167 77-273 22-191 (521)
240 KOG0637 Sucrose transporter an 97.5 0.00033 7.1E-09 69.0 7.8 167 69-252 32-202 (498)
241 KOG4686 Predicted sugar transp 97.5 6.3E-06 1.4E-10 76.2 -4.1 156 69-256 44-199 (459)
242 TIGR00769 AAA ADP/ATP carrier 97.4 0.041 9E-07 55.6 21.2 168 68-253 6-189 (472)
243 KOG0255 Synaptic vesicle trans 97.3 0.019 4.1E-07 58.7 19.2 146 69-254 322-467 (521)
244 TIGR00926 2A1704 Peptide:H+ sy 97.3 0.0079 1.7E-07 63.3 15.5 182 100-305 15-204 (654)
245 PRK15462 dipeptide/tripeptide 97.2 0.029 6.2E-07 57.1 18.8 89 139-252 348-437 (493)
246 PF01770 Folate_carrier: Reduc 97.1 0.043 9.4E-07 54.2 17.9 156 89-280 23-182 (412)
247 KOG2563 Permease of the major 97.0 0.0036 7.8E-08 61.8 9.5 181 71-285 268-455 (480)
248 COG2270 Permeases of the major 97.0 0.024 5.2E-07 55.7 14.4 124 90-245 36-167 (438)
249 KOG2615 Permease of the major 97.0 0.018 3.9E-07 55.9 13.2 152 69-254 260-413 (451)
250 KOG2816 Predicted transporter 96.9 0.014 2.9E-07 59.0 13.0 128 91-253 263-390 (463)
251 PF03137 OATP: Organic Anion T 96.7 0.00043 9.3E-09 71.2 0.0 181 70-256 306-515 (539)
252 KOG3626 Organic anion transpor 96.6 0.11 2.4E-06 54.8 16.6 76 70-145 393-470 (735)
253 PF06779 DUF1228: Protein of u 96.4 0.051 1.1E-06 41.3 9.9 65 91-156 13-77 (85)
254 KOG4332 Predicted sugar transp 96.3 0.0024 5.2E-08 58.9 2.4 156 90-276 57-216 (454)
255 PF06963 FPN1: Ferroportin1 (F 96.2 0.33 7.1E-06 48.6 17.3 136 87-248 276-411 (432)
256 KOG3098 Uncharacterized conser 96.2 0.68 1.5E-05 46.6 19.1 113 115-245 289-404 (461)
257 KOG3098 Uncharacterized conser 96.1 0.075 1.6E-06 53.3 12.3 89 111-233 56-144 (461)
258 KOG1330 Sugar transporter/spin 95.9 0.035 7.5E-07 55.2 8.5 139 95-259 273-417 (493)
259 PF06963 FPN1: Ferroportin1 (F 95.9 1.8 3.8E-05 43.4 20.6 202 71-285 4-206 (432)
260 KOG3574 Acetyl-CoA transporter 95.7 0.25 5.5E-06 48.1 13.0 159 64-249 26-189 (510)
261 KOG3762 Predicted transporter 95.4 0.014 3E-07 59.0 3.6 64 87-152 29-92 (618)
262 COG3104 PTR2 Dipeptide/tripept 95.4 0.53 1.1E-05 47.4 14.7 85 185-275 392-482 (498)
263 KOG2325 Predicted transporter/ 95.0 0.083 1.8E-06 53.3 7.7 198 66-272 259-467 (488)
264 KOG3097 Predicted membrane pro 93.7 4.2 9.1E-05 39.1 15.5 119 62-217 22-140 (390)
265 PF02487 CLN3: CLN3 protein; 93.7 0.61 1.3E-05 46.1 10.6 63 186-254 334-396 (402)
266 KOG4332 Predicted sugar transp 91.3 2.5 5.4E-05 39.6 10.5 80 190-275 347-426 (454)
267 TIGR00769 AAA ADP/ATP carrier 91.2 19 0.00041 36.6 20.2 70 197-271 276-345 (472)
268 PF03219 TLC: TLC ATP/ADP tran 90.9 12 0.00026 38.1 16.2 125 117-254 71-205 (491)
269 COG3202 ATP/ADP translocase [E 90.7 21 0.00045 36.3 17.9 168 67-254 25-209 (509)
270 PF02487 CLN3: CLN3 protein; 90.1 9.7 0.00021 37.7 14.2 121 118-279 72-194 (402)
271 PRK10263 DNA translocase FtsK; 89.8 4.8 0.0001 45.3 12.8 34 240-273 142-175 (1355)
272 PF03092 BT1: BT1 family; Int 88.1 3.8 8.2E-05 41.1 10.0 55 197-257 328-382 (433)
273 PF03219 TLC: TLC ATP/ADP tran 85.5 46 0.00099 34.0 22.0 70 197-271 292-361 (491)
274 TIGR00880 2_A_01_02 Multidrug 82.9 21 0.00045 28.0 11.2 45 107-152 89-133 (141)
275 TIGR00939 2a57 Equilibrative N 82.8 55 0.0012 32.9 15.8 31 187-218 106-136 (437)
276 KOG4112 Signal peptidase subun 82.4 3.8 8.3E-05 31.3 5.1 55 228-285 22-76 (101)
277 TIGR00939 2a57 Equilibrative N 81.8 25 0.00053 35.4 12.5 53 187-245 372-424 (437)
278 TIGR00806 rfc RFC reduced fola 81.8 27 0.00058 35.7 12.5 90 112-234 305-394 (511)
279 KOG1479 Nucleoside transporter 76.5 84 0.0018 31.2 17.4 82 189-278 119-202 (406)
280 COG5336 Uncharacterized protei 74.8 14 0.00031 29.2 6.4 31 123-153 60-90 (116)
281 PF13000 Acatn: Acetyl-coenzym 73.3 1E+02 0.0022 31.7 13.6 54 195-254 413-466 (544)
282 PF11947 DUF3464: Protein of u 73.1 11 0.00023 32.1 5.8 49 187-244 97-145 (153)
283 PF06645 SPC12: Microsomal sig 72.8 18 0.00038 26.9 6.3 49 232-283 11-59 (76)
284 KOG0637 Sucrose transporter an 72.7 8.6 0.00019 38.6 6.0 89 65-154 275-380 (498)
285 KOG1237 H+/oligopeptide sympor 70.8 14 0.00031 38.4 7.4 96 185-286 456-566 (571)
286 COG3619 Predicted membrane pro 69.7 88 0.0019 28.4 18.1 29 106-135 56-84 (226)
287 KOG3574 Acetyl-CoA transporter 66.1 65 0.0014 32.0 10.2 56 198-259 380-435 (510)
288 PF13000 Acatn: Acetyl-coenzym 65.1 68 0.0015 32.9 10.5 37 210-252 141-177 (544)
289 PF07672 MFS_Mycoplasma: Mycop 60.8 1.4E+02 0.003 27.9 10.9 33 108-140 144-176 (267)
290 COG3202 ATP/ADP translocase [E 58.2 2.2E+02 0.0048 29.1 21.4 76 197-277 294-370 (509)
291 PF01770 Folate_carrier: Reduc 57.7 2.1E+02 0.0045 28.6 13.1 86 108-220 288-373 (412)
292 PF01733 Nucleoside_tran: Nucl 57.2 4 8.6E-05 38.8 0.4 35 186-220 247-281 (309)
293 PF10777 YlaC: Inner membrane 56.4 45 0.00098 28.0 6.3 44 244-287 47-90 (155)
294 KOG1479 Nucleoside transporter 56.0 85 0.0018 31.2 9.3 35 186-220 342-376 (406)
295 PF06912 DUF1275: Protein of u 55.4 1.5E+02 0.0032 26.2 18.5 37 235-272 168-204 (209)
296 PF09527 ATPase_gene1: Putativ 51.2 75 0.0016 21.5 6.8 29 115-143 10-38 (55)
297 TIGR01666 YCCS hypothetical me 51.1 2E+02 0.0044 30.8 11.9 33 124-156 42-77 (704)
298 PF01528 Herpes_glycop: Herpes 49.1 83 0.0018 30.9 8.0 25 131-155 198-222 (374)
299 PF06570 DUF1129: Protein of u 47.7 2E+02 0.0044 25.5 10.0 31 254-284 172-202 (206)
300 TIGR01667 YCCS_YHJK integral m 47.1 2.4E+02 0.0053 30.3 11.8 33 124-156 42-77 (701)
301 PF12273 RCR: Chitin synthesis 42.8 15 0.00033 30.1 1.6 9 259-267 1-9 (130)
302 PF05631 DUF791: Protein of un 42.4 3.4E+02 0.0073 26.5 19.4 51 196-246 248-299 (354)
303 TIGR02230 ATPase_gene1 F0F1-AT 40.6 1.2E+02 0.0025 23.8 6.1 17 121-137 58-74 (100)
304 KOG4830 Predicted sugar transp 39.4 40 0.00087 31.6 3.9 54 70-123 202-255 (412)
305 KOG4830 Predicted sugar transp 38.9 39 0.00085 31.7 3.7 122 66-206 15-147 (412)
306 PF03988 DUF347: Repeat of Unk 38.7 1.2E+02 0.0027 20.7 5.4 23 237-259 6-28 (55)
307 PF13829 DUF4191: Domain of un 37.9 1.1E+02 0.0024 27.7 6.4 48 231-281 27-74 (224)
308 PF00854 PTR2: POT family; In 36.7 2.4E+02 0.0052 27.2 9.3 75 81-156 43-122 (372)
309 COG5336 Uncharacterized protei 35.4 2.3E+02 0.005 22.6 7.0 34 239-272 52-87 (116)
310 PRK02237 hypothetical protein; 34.2 91 0.002 24.8 4.6 50 105-155 56-105 (109)
311 COG4232 Thiol:disulfide interc 33.4 5.8E+02 0.012 26.6 12.0 31 190-220 328-358 (569)
312 TIGR02230 ATPase_gene1 F0F1-AT 31.8 2.2E+02 0.0048 22.3 6.4 21 237-257 51-71 (100)
313 PF14007 YtpI: YtpI-like prote 31.3 1.4E+02 0.0031 22.8 5.2 30 259-288 57-86 (89)
314 KOG1278 Endosomal membrane pro 30.5 6.4E+02 0.014 26.3 12.2 31 102-132 356-386 (628)
315 TIGR00927 2A1904 K+-dependent 30.4 3.4E+02 0.0074 30.2 9.5 21 91-111 954-974 (1096)
316 COG1230 CzcD Co/Zn/Cd efflux s 30.4 4.8E+02 0.01 24.8 12.2 42 68-111 25-66 (296)
317 PF06779 DUF1228: Protein of u 30.2 2.4E+02 0.0053 21.3 8.4 63 197-268 4-66 (85)
318 PRK10692 hypothetical protein; 29.1 87 0.0019 23.7 3.5 23 134-156 2-24 (92)
319 PRK11469 hypothetical protein; 28.1 4.1E+02 0.0089 23.2 11.5 52 101-153 130-182 (188)
320 KOG1484 Putative Zn2+ transpor 27.0 5.9E+02 0.013 24.7 10.1 46 233-281 212-257 (354)
321 PF02694 UPF0060: Uncharacteri 26.8 3.2E+02 0.007 21.6 8.2 50 105-155 54-103 (107)
322 PF11744 ALMT: Aluminium activ 26.7 6.5E+02 0.014 25.1 15.9 24 126-150 81-105 (406)
323 TIGR02123 TRAP_fused TRAP tran 26.1 6.9E+02 0.015 26.4 10.9 51 75-125 441-491 (613)
324 COG3086 RseC Positive regulato 25.6 3.3E+02 0.0071 22.9 6.7 9 124-132 91-99 (150)
325 TIGR01148 mtrC N5-methyltetrah 25.2 5.5E+02 0.012 23.7 13.0 26 122-147 114-139 (265)
326 PF03213 Pox_P35: Poxvirus P35 24.9 1.7E+02 0.0036 28.0 5.5 15 118-132 255-269 (325)
327 PF07672 MFS_Mycoplasma: Mycop 24.8 88 0.0019 29.1 3.6 55 227-281 4-64 (267)
328 PHA02688 ORF059 IMV protein VP 24.7 1.7E+02 0.0038 27.8 5.5 15 118-132 253-267 (323)
329 PF11151 DUF2929: Protein of u 24.6 2.5E+02 0.0053 19.5 6.4 39 234-272 7-45 (57)
330 PF11119 DUF2633: Protein of u 24.5 1.6E+02 0.0035 20.6 4.0 25 67-91 9-33 (59)
331 COG2364 Predicted membrane pro 23.8 3.6E+02 0.0079 24.1 7.0 23 186-208 106-128 (210)
332 COG4262 Predicted spermidine s 23.0 7.5E+02 0.016 24.5 15.7 36 92-130 33-68 (508)
333 PRK10263 DNA translocase FtsK; 23.0 7.2E+02 0.016 28.9 10.6 18 187-204 67-84 (1355)
334 PRK03612 spermidine synthase; 22.3 8.6E+02 0.019 25.0 20.4 14 362-375 391-404 (521)
335 PRK13747 putative mercury resi 22.3 3.2E+02 0.007 20.1 5.8 20 217-236 4-23 (78)
336 PF06645 SPC12: Microsomal sig 21.9 3.3E+02 0.0072 20.0 6.6 26 107-132 9-34 (76)
337 PF10762 DUF2583: Protein of u 21.1 1.4E+02 0.0031 22.5 3.4 23 134-156 2-24 (89)
338 PF06570 DUF1129: Protein of u 20.8 5.8E+02 0.013 22.5 13.6 19 142-160 153-171 (206)
339 PRK01030 tetrahydromethanopter 20.5 6.9E+02 0.015 23.2 15.1 28 122-149 108-135 (264)
340 PF02659 DUF204: Domain of unk 20.5 3.1E+02 0.0068 19.2 7.7 24 123-147 42-65 (67)
341 PTZ00370 STEVOR; Provisional 20.4 2E+02 0.0044 27.0 5.0 7 211-217 217-223 (296)
No 1
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=100.00 E-value=9.3e-48 Score=390.32 Aligned_cols=321 Identities=45% Similarity=0.724 Sum_probs=289.6
Q ss_pred CCccccCCCCCCCcc---cCCChHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHH
Q 016902 49 TTPVNVHGKPIADLS---KTGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLG 125 (380)
Q Consensus 49 ~~~~~~~~~p~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~ 125 (380)
.+..|+++.+. .+. ++++|+++.++++.+.++++++||+..|++.|++..+|.+...++..++.|.+..++.|+++
T Consensus 15 ~~~~d~~~~~~-~~~~~~~~g~~~s~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g 93 (571)
T KOG1237|consen 15 FTSVDYRGPLL-GSSIAFKTGGWLSAPFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLG 93 (571)
T ss_pred cceeeccCCcc-cccccceechhHhHHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHH
Confidence 35678887777 665 88999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchh
Q 016902 126 GFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIR 205 (380)
Q Consensus 126 g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~ 205 (380)
|+++|.|+||++++.++++++++|+.++++++.+|.+.|. .|.. ......|..++..+...++.+++++++|.|+.+
T Consensus 94 ~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~--~~~~-~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r 170 (571)
T KOG1237|consen 94 AFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPF--MCKF-KPGGNVCESPSKLQLAVLYGALYLIALGAGGIR 170 (571)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCc--cccC-CCCCCcccCcchHHHHHHHHHHHHheeccCCCC
Confidence 9999999999999999999999999999999999999987 6511 111336899999999999999999999999999
Q ss_pred hhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHHhhcccccc
Q 016902 206 PCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRH 285 (380)
Q Consensus 206 ~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~~~~~~~~~~~ 285 (380)
+|+.++++||||+.++++++.+.++|||||+..++|.+++.++..|+|++.||.++|.++++++++++++|+.+.+.|++
T Consensus 171 ~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~~g~~~y~~ 250 (571)
T KOG1237|consen 171 PCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFLPGFPFYRY 250 (571)
T ss_pred CcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHHcCceeEEe
Confidence 99999999999998888888899999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCccchHHHHHHHHHhhcccccCccccccccccCCCCccccCCCcccCCCCcccchhhhhhcccCC---CCCCCcc
Q 016902 286 RLPGGSPLTRVAQVLVAAFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDV---INPSPWK 362 (380)
Q Consensus 286 ~~~~~~~~~~~~~v~~~a~~~r~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ld~a~~~~~~~~---~~~~~w~ 362 (380)
++|.++|++++++|+++++|||+..+|.+++. ++. .........+++++|++|||+++.+++. ...+|||
T Consensus 251 ~~p~gsp~t~i~~Vlvaa~~k~~~~~~~~~~~-~~~------~~~~~~~~~~t~~f~~l~kaa~~~~~~~~~~~~~~~w~ 323 (571)
T KOG1237|consen 251 KKPRGSPKTRIGQVLVAAAFKRKAVVSLDPEE-LYY------DCTDSVAIEGTKPFRFLDKAALKTSDDLKDGLDANPWR 323 (571)
T ss_pred eCCCCCchhHHHHHHHHHHHHHhccCCCcchh-ccc------cccccccccCCcccchhhHhhccCCcccccccccCCcc
Confidence 99999999999999999999999999988665 311 1122344567899999999999865432 2468999
Q ss_pred cCCchhHHHHHHHHhcCC
Q 016902 363 LCTVTQVEEVKTLVRHTQ 380 (380)
Q Consensus 363 l~t~~qVE~~K~~lr~l~ 380 (380)
+||++||||+|+++|++|
T Consensus 324 lct~~~Vee~K~~lr~~P 341 (571)
T KOG1237|consen 324 LCTVTQVEEVKAVLRLLP 341 (571)
T ss_pred CCCceehhhhhhhhhhhH
Confidence 999999999999999987
No 2
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.96 E-value=1.9e-28 Score=253.34 Aligned_cols=238 Identities=27% Similarity=0.506 Sum_probs=202.0
Q ss_pred HHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccC
Q 016902 83 MAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVF 162 (380)
Q Consensus 83 ~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l 162 (380)
++|||+.+++..|+++.+|++.+.+..+.+.+....++.|++||+++|+++||+++++++.+++.+|.+++++++..+..
T Consensus 1 FsyYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~ 80 (654)
T TIGR00926 1 FSYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSG 80 (654)
T ss_pred CceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccc
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999885432111
Q ss_pred CCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHH
Q 016902 163 MPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGA 242 (380)
Q Consensus 163 ~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~ 242 (380)
.+ .+...++++++++++|.|++++|+.++++|||++++ ++++.++|+|+|+++|+|+
T Consensus 81 ~~--------------------~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~---~~~~~s~F~~fY~~iNiGS 137 (654)
T TIGR00926 81 HP--------------------LHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQ---LSLRSRFFSFFYFAINAGS 137 (654)
T ss_pred cc--------------------hHHHHHHHHHHHHHhhccccccCchhhhHhhcCccc---hhHHHHHHHHHHHHHHHHH
Confidence 11 234557889999999999999999999999998543 3458999999999999999
Q ss_pred HHHHHHHHHhhhcc-------hhhHHHHHHHHHHHHHHHHHHhhcccccccCCCCCccchHHHHHHHHHhhcccccCccc
Q 016902 243 IVAFTLVVYIQMEH-------GWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAAFSSSE 315 (380)
Q Consensus 243 ~i~~~i~~~i~~~~-------gw~~~f~i~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~~r~~~~p~~~ 315 (380)
++++++.+++++++ +|.++|++++++++++++++..+++.|++.+|.++++.++.++++.++|+|+...+.+
T Consensus 138 lis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~~g~k~y~~~~p~gs~l~~v~~vi~~a~~~~~~~~~~~- 216 (654)
T TIGR00926 138 LISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIVFMAGSKMYKKKPPKGNIVSKVIKCIVTALRKRFSTRSEH- 216 (654)
T ss_pred HHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHHHHHHHHHHhhccCCcc-
Confidence 99999999998543 6999999999999999999999999999989999999999999999988764322110
Q ss_pred cccccccCCCCccccCCCcccCCCCcccchhhhhhcccCCCCCCCcccCCchhHHHHHHHHhcCC
Q 016902 316 LIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRHTQ 380 (380)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ld~a~~~~~~~~~~~~~w~l~t~~qVE~~K~~lr~l~ 380 (380)
...+|+|+++.+ ..+++|||+|+++|++|
T Consensus 217 -----------------------~~~~~ld~a~~~-------------~~~~~V~evkrll~il~ 245 (654)
T TIGR00926 217 -----------------------WPLHWLDYAKDK-------------HDIRMIRSTKRLLRVLV 245 (654)
T ss_pred -----------------------cchhHHHHhccc-------------cccchHHHHHHHHHHHH
Confidence 013678877653 24578999999999864
No 3
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.94 E-value=9.1e-26 Score=220.37 Aligned_cols=192 Identities=21% Similarity=0.395 Sum_probs=178.7
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHH
Q 016902 65 TGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMH----KSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIA 140 (380)
Q Consensus 65 ~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~----~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~ 140 (380)
-+++|.++.++.+|+.|+++|||+...+..|++.+++ ++.+++..+.+.|....++.+++|||++||++|+|+++.
T Consensus 17 f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~ 96 (498)
T COG3104 17 FGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIV 96 (498)
T ss_pred CCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHH
Confidence 4467789999999999999999999999999999999 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCC
Q 016902 141 IFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERS 220 (380)
Q Consensus 141 i~~~l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~ 220 (380)
++.+++.+|.++++.+.. .....+++++.++++|.|++++|...+++|++++++
T Consensus 97 lGail~~iGh~~L~~~~~--------------------------~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~D 150 (498)
T COG3104 97 LGAILMAIGHLVLAISSV--------------------------SGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDD 150 (498)
T ss_pred HHHHHHHHHHHHHhcccc--------------------------ccccHHHHHHHHHHhccccccccHHHHHHHhcCCCC
Confidence 999999999999987520 135568999999999999999999999999999988
Q ss_pred chhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHHhhccccccc
Q 016902 221 KDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHR 286 (380)
Q Consensus 221 ~~~~~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~~~~~~~~~~~~ 286 (380)
+. |..+|+++|++.|+|++++|.+.+++.+++||..+|.+.++.+.++++.+++++|.+...
T Consensus 151 pr----rD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~ 212 (498)
T COG3104 151 PR----RDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGI 212 (498)
T ss_pred cc----cCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhcCC
Confidence 65 899999999999999999999999999999999999999999999999999999887654
No 4
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.92 E-value=2e-23 Score=211.32 Aligned_cols=190 Identities=17% Similarity=0.304 Sum_probs=168.3
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHH
Q 016902 65 TGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTT 144 (380)
Q Consensus 65 ~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~ 144 (380)
+++||.++.+++.+++|++++|++..+++.|+++++|++..+++++++.+.+..++.++++|+++||++|||++++++.+
T Consensus 10 ~~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~ 89 (489)
T PRK10207 10 LQQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAI 89 (489)
T ss_pred hcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999999999999995599999999999
Q ss_pred HHHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhh
Q 016902 145 IYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYK 224 (380)
Q Consensus 145 l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~ 224 (380)
++.+|.++++++.. ....++++++++++|.|..+++..++++|+||++++
T Consensus 90 ~~~~g~~~~~~~~~---------------------------~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~--- 139 (489)
T PRK10207 90 VLAIGYFMTGMSLL---------------------------KPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDP--- 139 (489)
T ss_pred HHHHHHHHHHHhcc---------------------------chhHHHHHHHHHHhccccccCCHHHHHHHhcCCCch---
Confidence 99999998887511 123466789999999999999999999999987652
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHHhhcccccc
Q 016902 225 THLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRH 285 (380)
Q Consensus 225 ~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~~~~~~~~~~~ 285 (380)
+|.+.++++|++.|+|+.++|.+++++.++.||++.|+++.+.+.++++.+...++.+++
T Consensus 140 -~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~~~~~~~~~~~~~~~~ 199 (489)
T PRK10207 140 -RLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGLIIALLVYFACRGMVKD 199 (489)
T ss_pred -hhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHcchhhcc
Confidence 267889999999999999999999999999999999999887777777777777666554
No 5
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.90 E-value=4.8e-22 Score=200.68 Aligned_cols=193 Identities=18% Similarity=0.249 Sum_probs=169.2
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHH
Q 016902 65 TGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYV--MHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIF 142 (380)
Q Consensus 65 ~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~--~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~ 142 (380)
.++.+.++.+++.++++++++|++.++++.|++++ +|++..+++.+.+.+.++.+++++++|+++||++|||++++++
T Consensus 6 ~~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~ 85 (475)
T TIGR00924 6 FGHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLG 85 (475)
T ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHH
Confidence 34566788999999999999999999999999988 9999999999999999999999999999999955999999999
Q ss_pred HHHHHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCch
Q 016902 143 TTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKD 222 (380)
Q Consensus 143 ~~l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~ 222 (380)
.+++.++.++++++ .+...+++++++.++|.|+..++..++++|+++++++
T Consensus 86 ~~~~~~g~~~~~~~----------------------------~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~- 136 (475)
T TIGR00924 86 GIVLMLGHFMLAMS----------------------------IYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDM- 136 (475)
T ss_pred HHHHHHHHHHHHhc----------------------------ccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCc-
Confidence 99999999887764 2345677888999999999999999999999986542
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHHhhcccccccCC
Q 016902 223 YKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLP 288 (380)
Q Consensus 223 ~~~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~~~~~~~~~~~~~~ 288 (380)
.+|+++++++|++.++|+++|+.+++++.++.||++.|+++++.+++++++++..++.+++.++
T Consensus 137 --~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~ 200 (475)
T TIGR00924 137 --PRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFFAGRHMLRDIGS 200 (475)
T ss_pred --ccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHcccccccCCC
Confidence 1278899999999999999999999999999999999999888887777777777766655443
No 6
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.88 E-value=3.3e-21 Score=193.57 Aligned_cols=189 Identities=20% Similarity=0.341 Sum_probs=164.3
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHH
Q 016902 66 GGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTI 145 (380)
Q Consensus 66 ~~~~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l 145 (380)
++++.++.+++.++.+++++|++...++.|+++.+|++..+++.+.+.+.+..+++++++|+++||++|||++++++.++
T Consensus 6 ~~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il 85 (493)
T PRK15462 6 SQPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALL 85 (493)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHH
Confidence 46778999999999999999999999999999999999999999999999999999999999999988999999999999
Q ss_pred HHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhh
Q 016902 146 YLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKT 225 (380)
Q Consensus 146 ~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~ 225 (380)
..+|.+++.... .....+++++.+.++|.|..+++..++++|+||++++.
T Consensus 86 ~~lg~lll~~~~---------------------------~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~--- 135 (493)
T PRK15462 86 MAIGHVVLGASE---------------------------IHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPR--- 135 (493)
T ss_pred HHHHHHHHHHhh---------------------------cchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCcc---
Confidence 999987665421 11233556666777888888999999999999976432
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHHhhcccccc
Q 016902 226 HLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRH 285 (380)
Q Consensus 226 ~r~~~~~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~~~~~~~~~~~ 285 (380)
|.++++++|...++|++++|.+.+++.++.||+++|+++++.++++++.++.+++.+.+
T Consensus 136 -R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~~~~~~~~l~~ 194 (493)
T PRK15462 136 -RDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHFTH 194 (493)
T ss_pred -ccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHhhhhhcc
Confidence 89999999999999999999999999999999999999888888888887777666543
No 7
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.86 E-value=3e-20 Score=188.81 Aligned_cols=189 Identities=21% Similarity=0.345 Sum_probs=161.1
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHH
Q 016902 66 GGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTI 145 (380)
Q Consensus 66 ~~~~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l 145 (380)
++.+.++.+++.++++++++|++..+++.|+++++|++..+++...+.+.+..+..++++|+++||++|||++++++.++
T Consensus 18 ~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~ 97 (500)
T PRK09584 18 KQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIV 97 (500)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHH
Confidence 44566889999999999999999999999999999999999998888888888888889999999955999999999999
Q ss_pred HHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhh
Q 016902 146 YLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKT 225 (380)
Q Consensus 146 ~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~ 225 (380)
+.++.++++++. .....++++++++++|.|...++..++++|+||++++
T Consensus 98 ~~ig~~l~~~~~---------------------------~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~---- 146 (500)
T PRK09584 98 LAIGYALVAWSG---------------------------HDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDP---- 146 (500)
T ss_pred HHHHHHHHHHhc---------------------------ccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCch----
Confidence 999988877641 1244567788899999999999999999999986542
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHHhhcccccc
Q 016902 226 HLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRH 285 (380)
Q Consensus 226 ~r~~~~~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~~~~~~~~~~~ 285 (380)
++...++++|++.++|+.++|.+++++.++.||++.|++.++.++++++.++..++.++.
T Consensus 147 ~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~~~~~~~ 206 (500)
T PRK09584 147 RLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITVVNFAFCQRWVKQ 206 (500)
T ss_pred hhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhHHHhcc
Confidence 256688999999999999999999999999999999999888777777766665554443
No 8
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=99.86 E-value=3.2e-22 Score=195.80 Aligned_cols=212 Identities=36% Similarity=0.549 Sum_probs=149.2
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhcc
Q 016902 136 YWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQ 215 (380)
Q Consensus 136 ~~~i~i~~~l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~ 215 (380)
+|+++++.+++++|.+++++++..+... ++.+...++++++++++|.|+.++|+.++++||
T Consensus 1 yktI~~g~~~~~~G~~ll~l~~~~~~~~-------------------~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq 61 (372)
T PF00854_consen 1 YKTILLGSIVYLLGHVLLTLSAIPPSLP-------------------SGIQLGLFYIGLALIAVGTGGIKPNISPFGADQ 61 (372)
T ss_dssp HHHHHHHHHHHHHHHHH--HHHTSSSC-------------------------CHHHHHHHHHHHHHHCCHHHHHHHHHHC
T ss_pred CHhhhHHHHHHHHHHHHhHHHHhcchhh-------------------hhHHHHHHHHHHHHHHhccccccccHHHHHHHH
Confidence 6899999999999999999887644331 124677899999999999999999999999999
Q ss_pred CCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHHhhccccccc-CCCCCccc
Q 016902 216 FDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHR-LPGGSPLT 294 (380)
Q Consensus 216 f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~ 294 (380)
+++++ +.+|.++|+|||++.|+|+++++++.+|+++++||.++|+++++.+++++++++.+++.|++. +|.++++.
T Consensus 62 ~~~~~---~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~~~y~~~~~~~~~~~~ 138 (372)
T PF00854_consen 62 YDEDD---DSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGRKRYRKVAPPGGSPLT 138 (372)
T ss_dssp SSTTT---TTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCCCTT--S-----S--S
T ss_pred hcccc---hhhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCCcCCcCcCccCCcccc
Confidence 99764 334999999999999999999999999999999999999999999999999999999999988 78889998
Q ss_pred h-HHHHHHHHHhhcccccCccccccccccCCCCccccCCCcccCCCCcccchhhhhhcccCCCCCCCcc-cCCchhHHHH
Q 016902 295 R-VAQVLVAAFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWK-LCTVTQVEEV 372 (380)
Q Consensus 295 ~-~~~v~~~a~~~r~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ld~a~~~~~~~~~~~~~w~-l~t~~qVE~~ 372 (380)
+ ...++.++.+++....|.+..+ +++...... +..........+ +...+... ...|. .|++++||++
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~------~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~ 207 (372)
T PF00854_consen 139 NFIKLVLVAAFKKRKLAVPKGSSW-LDWALFQYS------ERSIFGIIVFIR-AAVIFFPE---IFFWALFCQVQRVEEL 207 (372)
T ss_dssp --SHHHHHHHHHHHCCCH-HHHHH-HHHHHHHHC------CCCCCCCCCHHH-HHHHHCCC---HHHHTTTSSTTTHHHC
T ss_pred hhHHHHHHHHHHHhhcccccchHH-HHHhhhhhh------hhhhhhhhhhcc-chhhhhhh---hhhcccCCccceeeee
Confidence 8 7788888888888888754443 332211000 000111222222 22222111 12233 2899999999
Q ss_pred HHHHhcCC
Q 016902 373 KTLVRHTQ 380 (380)
Q Consensus 373 K~~lr~l~ 380 (380)
|.++|++|
T Consensus 208 k~~~~~~~ 215 (372)
T PF00854_consen 208 KALIRFLP 215 (372)
T ss_dssp CHHHCHHH
T ss_pred eeeeeccc
Confidence 99998764
No 9
>PRK03545 putative arabinose transporter; Provisional
Probab=99.74 E-value=4.9e-16 Score=152.69 Aligned_cols=178 Identities=13% Similarity=0.125 Sum_probs=145.5
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHH
Q 016902 65 TGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTT 144 (380)
Q Consensus 65 ~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~ 144 (380)
.++|..++.+.+..++.....+. ...+...+.+++|.+..+.++..+.+.++..++.++.|+++||+ |||+++.++.+
T Consensus 5 ~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~ 82 (390)
T PRK03545 5 KVAWLRVVTLALAAFIFNTTEFV-PVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNV-ERRKLLIGLFV 82 (390)
T ss_pred ccchHHHHHHHHHHHHHHhHHHH-HHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-ChHHHHHHHHH
Confidence 34565556555555554444432 22334567889999999999999999999999999999999998 99999999999
Q ss_pred HHHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhh
Q 016902 145 IYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYK 224 (380)
Q Consensus 145 l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~ 224 (380)
++.++.+++.++ .+...++++|++.|++.+...+...++..|.+|+++
T Consensus 83 ~~~~~~~~~~~~----------------------------~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~---- 130 (390)
T PRK03545 83 LFIASHVLSALA----------------------------WNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGK---- 130 (390)
T ss_pred HHHHHHHHHHHh----------------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhh----
Confidence 999988877764 357788899999999998888889999999999776
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHHh
Q 016902 225 THLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (380)
Q Consensus 225 ~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~~~~ 278 (380)
|++.++++..+.++|..+++.+++++.+..||++.|++.+++.++..+..+.
T Consensus 131 --r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~ 182 (390)
T PRK03545 131 --KAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIK 182 (390)
T ss_pred --hhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999988899999999887776655444333
No 10
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.73 E-value=6.6e-16 Score=153.33 Aligned_cols=180 Identities=16% Similarity=0.085 Sum_probs=140.2
Q ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCccccccc
Q 016902 95 FMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQ 174 (380)
Q Consensus 95 yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~ 174 (380)
.+.+++|.+...+++.++++.++..++.+++|+++||+ |||++++++.+++.++.+++.++
T Consensus 41 ~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-Grr~~l~~~~~~~~~~~~~~~~a------------------ 101 (413)
T PRK15403 41 NVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRI-GRRPVLITGALIFTLACAATLFT------------------ 101 (413)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHc-CchHHHHHHHHHHHHHHHHHHHc------------------
Confidence 46789999999999999999999999999999999998 99999999999998888877764
Q ss_pred ccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhh
Q 016902 175 LLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQM 254 (380)
Q Consensus 175 ~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~ 254 (380)
.+...++++|++.|++.+...+...++..|.+++++ +++.++++.....+|..++|.+++++.+
T Consensus 102 ----------~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~g~~lg~~l~~ 165 (413)
T PRK15403 102 ----------TSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTK------GIKLMAIITSIVLVAPIIGPLSGAALMH 165 (413)
T ss_pred ----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 357788999999999988766777788899999776 8888999999999999999999999988
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhhcccccccCCCCCccchHHHHHHHHHhhccc
Q 016902 255 EHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHA 309 (380)
Q Consensus 255 ~~gw~~~f~i~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~~r~~ 309 (380)
..||++.|++.+++.+++++..+...|+....+.+........+-+...+|||+.
T Consensus 166 ~~gw~~~f~~~~~~~~i~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~ll~~~~~ 220 (413)
T PRK15403 166 FVHWKVLFAIIAVMGLIAFVGLLLAMPETVKRGAVPFSAKSVLRDFRNVFRNRLF 220 (413)
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHHhCCCCccccCCCCChHHHHHHHHHHHcCHHH
Confidence 8899999998887766665543333333211111111222334444555566554
No 11
>PRK10054 putative transporter; Provisional
Probab=99.72 E-value=9.7e-16 Score=151.22 Aligned_cols=173 Identities=15% Similarity=0.141 Sum_probs=145.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHH
Q 016902 68 WIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYL 147 (380)
Q Consensus 68 ~~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~ 147 (380)
.|..+.+++..++..++++.+...++.|+++++|++..+.+++.+.+.++..++.++.|+++||+ |||++++++.++..
T Consensus 6 ~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~k~~~~~~~~~~~ 84 (395)
T PRK10054 6 RRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKF-DKKRYMLLAITAFA 84 (395)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcchhHHHHHHHHH
Confidence 44567777788888888888888999999999999999999999999999999999999999997 99999999998888
Q ss_pred HHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhh
Q 016902 148 AGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHL 227 (380)
Q Consensus 148 lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r 227 (380)
++.+++.++ .+...+++++.+.+.+.+...++..++.+|.+++++ |
T Consensus 85 ~~~~~~~~~----------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~ 130 (395)
T PRK10054 85 SGFIAIPLV----------------------------NNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTS------K 130 (395)
T ss_pred HHHHHHHHH----------------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhH------H
Confidence 887766654 245556666667777777777888899999998766 9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHH
Q 016902 228 DRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLF 276 (380)
Q Consensus 228 ~~~~~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~~ 276 (380)
++.+++.+...++|..++|.+++++.+ .+|+..|++.+++.++++++.
T Consensus 131 ~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~ 178 (395)
T PRK10054 131 TKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFI 178 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998875 689999998877776665443
No 12
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.72 E-value=7e-16 Score=153.09 Aligned_cols=178 Identities=15% Similarity=0.071 Sum_probs=147.1
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHH
Q 016902 65 TGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTT 144 (380)
Q Consensus 65 ~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~ 144 (380)
+.+|+..+.+.+..+++.+....+ .....++++++|++..+.+++.+.+.++..++.+++|+++||+ |||+++.++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-G~r~~~~~~~~ 81 (412)
T TIGR02332 4 KLFRRLIIFLFILFIFSFLDRINI-GFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAII-GARRWIAGIMV 81 (412)
T ss_pred eehhHHHHHHHHHHHHHHhhhhhH-HHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHh-ChHHHHHHHHH
Confidence 345666666666666655555434 3455689999999999999999999999999999999999998 99999999999
Q ss_pred HHHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhh
Q 016902 145 IYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYK 224 (380)
Q Consensus 145 l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~ 224 (380)
++.++.+++.++ .+...++++|++.|++.++..+....+.+|.+|+++
T Consensus 82 ~~~~~~~~~~~~----------------------------~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~---- 129 (412)
T TIGR02332 82 LWGIASTATMFA----------------------------TGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYF---- 129 (412)
T ss_pred HHHHHHHHHHHh----------------------------cCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHH----
Confidence 999998888765 356778999999999999999988899999999766
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHhhh------cchhhHHHHHHHHHHHHHHHHHHh
Q 016902 225 THLDRFFNFFYLSVTVGAIVAFTLVVYIQM------EHGWGSAFGALAIAMGISNMLFFI 278 (380)
Q Consensus 225 ~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~------~~gw~~~f~i~~~~~~~~~i~~~~ 278 (380)
|+...++++.+..+|..+++.+++++.+ ..|||+.|++.++..++..++.++
T Consensus 130 --rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~ 187 (412)
T TIGR02332 130 --RARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWF 187 (412)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999998864 368999999877666554444333
No 13
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.71 E-value=1.5e-17 Score=161.14 Aligned_cols=210 Identities=18% Similarity=0.194 Sum_probs=171.2
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHH
Q 016902 66 GGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTI 145 (380)
Q Consensus 66 ~~~~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l 145 (380)
..++.+..+++..+++++--|.+.. ...-+++.+|+++...+++.+.+.+...+..++.|+|+||| .|++++.++..+
T Consensus 30 ~~~~~l~il~~vnlmny~Dr~~iag-v~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadry-NR~~v~~vG~~i 107 (493)
T KOG1330|consen 30 SPTLTLVILCLVNLMNYADRYTIAG-VLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRY-NRKRVIAVGIFI 107 (493)
T ss_pred cchHHHHHHHHHHHHHHhhhhhhhh-hhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhc-CcceEEeeHHHH
Confidence 4455677888888888888887766 34568889999999999999999999999999999999999 999999999999
Q ss_pred HHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhh
Q 016902 146 YLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKT 225 (380)
Q Consensus 146 ~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~ 225 (380)
..+..+..+++ ...+++.+.|.+.|+|.+...+..+++++|.|+++.
T Consensus 108 W~~Av~~~~fs----------------------------~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~----- 154 (493)
T KOG1330|consen 108 WTLAVFASGFS----------------------------NHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDK----- 154 (493)
T ss_pred HHHHHHHHHHH----------------------------HHHHHHHHHHHHhccchhhhcccchhHhhhcCcchh-----
Confidence 99988888775 468889999999999999999999999999999988
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHhhhcch-hhHHHHHHHHHHHHHHHHHHhhcccccc-cCC--C-----CCccchH
Q 016902 226 HLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHG-WGSAFGALAIAMGISNMLFFIGTPLYRH-RLP--G-----GSPLTRV 296 (380)
Q Consensus 226 ~r~~~~~~~~~~~~iG~~i~~~i~~~i~~~~g-w~~~f~i~~~~~~~~~i~~~~~~~~~~~-~~~--~-----~~~~~~~ 296 (380)
|+..++|+|+++.+|..+|.+++.++.+..+ |||+|++.+++.++..++.++..+..++ ..+ . ..+.+..
T Consensus 155 -Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~~~~~~~~~~~~ts~ 233 (493)
T KOG1330|consen 155 -RSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPERGARDEVDGENKMVKPFTSV 233 (493)
T ss_pred -hhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCcccccccccccCCcCCCCccch
Confidence 9999999999999999999999999987766 9999998888877666655444433221 111 1 1345566
Q ss_pred HHHHHHHHhhccccc
Q 016902 297 AQVLVAAFRKRHAAF 311 (380)
Q Consensus 297 ~~v~~~a~~~r~~~~ 311 (380)
.+=++...|++....
T Consensus 234 ~kDl~~l~~~~v~v~ 248 (493)
T KOG1330|consen 234 WKDLKVLAKIKVFVL 248 (493)
T ss_pred HHHHHHHHccCceee
Confidence 665555555544433
No 14
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.71 E-value=1.4e-15 Score=154.46 Aligned_cols=177 Identities=14% Similarity=0.044 Sum_probs=147.7
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHH
Q 016902 67 GWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIY 146 (380)
Q Consensus 67 ~~~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~ 146 (380)
+|..+..+++..++..+....+...++ .+.+++|.+..+.+++.+.|.++..++.+++|+++|++ |||++++++.+++
T Consensus 4 ~~~~~~~~~~~~~~~~ld~tiv~~a~p-~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~-Grk~~l~~~~~~~ 81 (495)
T PRK14995 4 QWLTLVIIVLVYIPVAIDATVLHVAAP-TLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRI-GFKRLLMLGGTLF 81 (495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHH
Confidence 466667777777777777665555544 56789999999999999999999999999999999998 9999999999999
Q ss_pred HHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCC-CCCchhhh
Q 016902 147 LAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFD-ERSKDYKT 225 (380)
Q Consensus 147 ~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~-~~~~~~~~ 225 (380)
.++.+++..+ .+...++++|++.|+|.++..+.....+.+.++ +++
T Consensus 82 ~~~~~~~~~a----------------------------~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~----- 128 (495)
T PRK14995 82 GLASLAAAFS----------------------------PTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQ----- 128 (495)
T ss_pred HHHHHHHHHc----------------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH-----
Confidence 9999888765 357789999999999999988888888878774 344
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHHhh
Q 016902 226 HLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIG 279 (380)
Q Consensus 226 ~r~~~~~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~~~~~ 279 (380)
|+.+++++.....+|..+||.+++++.++.||||.|++...+.++.+++.+..
T Consensus 129 -r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~ 181 (495)
T PRK14995 129 -RNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARY 181 (495)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999998766655555444443
No 15
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.70 E-value=1.4e-15 Score=145.82 Aligned_cols=165 Identities=19% Similarity=0.237 Sum_probs=140.7
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHh
Q 016902 76 GNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITL 155 (380)
Q Consensus 76 ~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l 155 (380)
+..++..+....+...++.++.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||++++++.++..++.+++.+
T Consensus 3 l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~~ 81 (352)
T PF07690_consen 3 LAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRF-GRRRVLIIGLLLFALGSLLLAF 81 (352)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS--HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCeeeEeehhhhhhhHHHHhhh
Confidence 445555566555555555588899999999999999999999999999999999997 9999999999999998555554
Q ss_pred hhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHH
Q 016902 156 CATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFY 235 (380)
Q Consensus 156 ~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~ 235 (380)
+ .+...+++++++.|++.+...+...++++|.+++++ |+..+++++
T Consensus 82 ~----------------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~------~~~~~~~~~ 127 (352)
T PF07690_consen 82 A----------------------------SNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEE------RGRAFGILS 127 (352)
T ss_dssp H----------------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCC------HHHHHHHHH
T ss_pred h----------------------------hhHHHHhhhccccccccccccccccccccccchhhh------hhhcccccc
Confidence 3 134478999999999999999999999999999877 999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHH
Q 016902 236 LSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNML 275 (380)
Q Consensus 236 ~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~ 275 (380)
....+|..+++.+++++.+..+|++.|++.+++.++..++
T Consensus 128 ~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il 167 (352)
T PF07690_consen 128 AGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAIL 167 (352)
T ss_dssp HHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHH
T ss_pred chhhhhhhcccchhhhhhhccccccccccccchhhhhhhh
Confidence 9999999999999999998899999999988888777664
No 16
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.70 E-value=3.7e-15 Score=147.04 Aligned_cols=177 Identities=13% Similarity=0.119 Sum_probs=147.3
Q ss_pred ccCCChHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHH
Q 016902 63 SKTGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIF 142 (380)
Q Consensus 63 ~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~ 142 (380)
.++..|+....+.+..++.....|.....++. +.+++|++..+.+..++.+..+..++.++.|+++||+ |||+.++++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-grr~~~~~~ 91 (394)
T PRK10213 14 ITRPNWSAVFSVAFCVACLIIVEFLPVSLLTP-MAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQAT-DRRYVVILF 91 (394)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHhhHHH-HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccc-CcHHHHHHH
Confidence 34556776666666655555555555554544 5678999999999999999999999999999999998 999999999
Q ss_pred HHHHHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCch
Q 016902 143 TTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKD 222 (380)
Q Consensus 143 ~~l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~ 222 (380)
.+++.++.+++.++ .+...+++.|++.|++.|...+...++..|.+|+++
T Consensus 92 ~~~~~~~~~~~~~~----------------------------~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~-- 141 (394)
T PRK10213 92 AVLLTLSCLLVSFA----------------------------NSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRT-- 141 (394)
T ss_pred HHHHHHHHHHHHHH----------------------------ChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhH--
Confidence 99999888777664 357889999999999999999999999999999777
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHH
Q 016902 223 YKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNML 275 (380)
Q Consensus 223 ~~~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~ 275 (380)
|+.+.+++..+.++|..++|.+++++.+..||++.|++.+++.++..+.
T Consensus 142 ----~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~ 190 (394)
T PRK10213 142 ----VPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFW 190 (394)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999899999999877655544433
No 17
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.69 E-value=5.2e-15 Score=143.32 Aligned_cols=181 Identities=13% Similarity=0.142 Sum_probs=162.7
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHH
Q 016902 65 TGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTT 144 (380)
Q Consensus 65 ~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~ 144 (380)
+..|..++.+.+..|+-..+-+.... +.+-+.+++|.+...++..++.|..+..++.++...++||+ .||+.++....
T Consensus 9 ~~~~~~l~aLa~~~F~igttEfv~~g-LLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~-~Rr~lLl~~l~ 86 (394)
T COG2814 9 KPMWLALLALALAAFAIGTTEFVPVG-LLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRL-ERRRLLLGLLA 86 (394)
T ss_pred ccchHHHHHHHHHHHHHHhHHHHHHh-chHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHccc-chHHHHHHHHH
Confidence 44566677777777777777775555 45668889999999999999999999999999999999998 99999999999
Q ss_pred HHHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhh
Q 016902 145 IYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYK 224 (380)
Q Consensus 145 l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~ 224 (380)
+++++.++.+++ +++..+.++|++.|+..|.+.+...+..++..|+++
T Consensus 87 lFi~~n~l~alA----------------------------p~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~---- 134 (394)
T COG2814 87 LFIVSNLLSALA----------------------------PSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGK---- 134 (394)
T ss_pred HHHHHHHHHHHh----------------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc----
Confidence 999999999997 578999999999999999999999999999999988
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHHhhcc
Q 016902 225 THLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTP 281 (380)
Q Consensus 225 ~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~~~~~~~ 281 (380)
|+++.+..+.+..++..+|..++.++.+.+|||..|++.+++.+++++..+...|
T Consensus 135 --~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 135 --RGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred --hhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999999999999988888888777766666
No 18
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.69 E-value=2.5e-15 Score=148.43 Aligned_cols=166 Identities=13% Similarity=0.087 Sum_probs=133.3
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhh
Q 016902 77 NEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLC 156 (380)
Q Consensus 77 ~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~ 156 (380)
.+++..+....+...++ .+.+++|.+..+.+...+.+.++..++.++.|+++||+ |||++++++.++..++.+++..+
T Consensus 21 ~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~ 98 (406)
T PRK15402 21 FEFATYIANDMIQPGML-AVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRI-GRRPVMLAGVAFFILTCLAILLA 98 (406)
T ss_pred HHHHHHhhhhhHhcchH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333444443 46678999999999999999999999999999999998 99999999998888887776654
Q ss_pred hhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHH
Q 016902 157 ATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYL 236 (380)
Q Consensus 157 ~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~ 236 (380)
.+...+++.+++.|++.+...+...+.+.|.++++. |.+.+++++.
T Consensus 99 ----------------------------~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~------~~~~~~~~~~ 144 (406)
T PRK15402 99 ----------------------------QSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEAD------AIKITALMAN 144 (406)
T ss_pred ----------------------------ccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhH------HHHHHHHHHH
Confidence 346678888999999988888888899999998776 7888888877
Q ss_pred HHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHHh
Q 016902 237 SVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (380)
Q Consensus 237 ~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~~~~ 278 (380)
...+|..++|.+++++.+..+|++.|++.+++.+++.+..+.
T Consensus 145 ~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~ 186 (406)
T PRK15402 145 VALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWR 186 (406)
T ss_pred HHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHH
Confidence 778899999999999988889999999877777666554443
No 19
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.69 E-value=4e-15 Score=144.91 Aligned_cols=178 Identities=19% Similarity=0.177 Sum_probs=144.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHH
Q 016902 68 WIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYL 147 (380)
Q Consensus 68 ~~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~ 147 (380)
++.++.+....++..++...+... .+++.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~ 81 (385)
T TIGR00710 4 KAFALLLGCLSILGPLGIDMYLPA-FPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRY-GRRPVLLLGLFIFA 81 (385)
T ss_pred hHHHHHHHHHHHHHHHHHHHhccc-HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHHHH
Confidence 344455555555555554444443 4567789999999999999999999999999999999998 99999999999888
Q ss_pred HHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhh
Q 016902 148 AGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHL 227 (380)
Q Consensus 148 lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r 227 (380)
++.+++..+ .+...+++++++.|++.+...+...++..|.+|+++ |
T Consensus 82 ~~~~~~~~~----------------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~ 127 (385)
T TIGR00710 82 LSSLGLALS----------------------------NNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEE------L 127 (385)
T ss_pred HHHHHHHHH----------------------------ccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHH------H
Confidence 888877654 346678889999999999999999999999999776 9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHHhhcc
Q 016902 228 DRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTP 281 (380)
Q Consensus 228 ~~~~~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~~~~~~~ 281 (380)
+..+++++....+|..+++.+++++.+..+|++.|++.+++.++..++.+...+
T Consensus 128 ~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (385)
T TIGR00710 128 SRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILP 181 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999999988889999998877766655555444333
No 20
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.69 E-value=3.1e-15 Score=143.98 Aligned_cols=173 Identities=17% Similarity=0.081 Sum_probs=140.5
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHH
Q 016902 74 IFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGI 153 (380)
Q Consensus 74 i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l 153 (380)
++...++..++.......++.|+. +++.+..+.+++.+.+.++..++.++.|+++||+ |||++++++.++..++.+++
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~-g~r~~~~~~~~~~~~~~~~~ 81 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVL-AGTGSASVLSLAALAGMLPYVVLSPIAGALADRY-DRKKVMIGADLIRAVLVAVL 81 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHH-HhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhh-chhHHHHHHHHHHHHHHHHH
Confidence 344555555555545555566654 6899999999999999999999999999999998 99999999988888777776
Q ss_pred HhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHH
Q 016902 154 TLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNF 233 (380)
Q Consensus 154 ~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~ 233 (380)
.+....+ ..+...+++++++.|++.+...++..++.+|.+++++ |++.+++
T Consensus 82 ~~~~~~~-----------------------~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 132 (365)
T TIGR00900 82 PFVALLG-----------------------GLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQ------LTQANSL 132 (365)
T ss_pred HHHHHcC-----------------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH------HHHHHhH
Confidence 6542110 0257778899999999999999999999999999776 9999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHH
Q 016902 234 FYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFF 277 (380)
Q Consensus 234 ~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~~~ 277 (380)
++....+|..+++.+++++.+..||++.|++.++..+++.++.+
T Consensus 133 ~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 176 (365)
T TIGR00900 133 SQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIV 176 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999889999999887776665554443
No 21
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.68 E-value=7.4e-15 Score=145.18 Aligned_cols=169 Identities=15% Similarity=0.203 Sum_probs=146.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHH
Q 016902 72 LFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLT 151 (380)
Q Consensus 72 ~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~ 151 (380)
++++...++..++++.+.+.++.|+++++|++..+.+.+.+.+.+...+..+++|+++||+ |||+++.++.++..++.+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~-g~k~~l~~~~~~~~~~~~ 91 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRF-GAKPMIVTGMLMRAAGFA 91 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHh-CchHHHHHHHHHHHHHHH
Confidence 5666777888888888888999999999999999999999999999999999999999998 999999999999998888
Q ss_pred HHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHH
Q 016902 152 GITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFF 231 (380)
Q Consensus 152 ~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~ 231 (380)
++... .+...+++++++.|++.+...+...++..|.+|+++ |++++
T Consensus 92 ~~~~~----------------------------~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~a~ 137 (400)
T PRK11646 92 TMAIA----------------------------HEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQ------RGRFF 137 (400)
T ss_pred HHHHh----------------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHH
Confidence 77653 246677888999999988888888999999999766 99999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHH
Q 016902 232 NFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLF 276 (380)
Q Consensus 232 ~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~~ 276 (380)
++++...++|..++|.+++++. ..||++.|++.++..++..++.
T Consensus 138 ~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~ 181 (400)
T PRK11646 138 SLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFN 181 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998 6799999998776665554443
No 22
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.68 E-value=8.1e-15 Score=143.44 Aligned_cols=174 Identities=13% Similarity=0.212 Sum_probs=147.2
Q ss_pred ccCCChHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHH
Q 016902 63 SKTGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIF 142 (380)
Q Consensus 63 ~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~ 142 (380)
.++.+|+......+..++..+..+.+.. ....+++++|++..+.+++.+.+.++..++.++.|+++||+ |||++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~~~~~ 83 (405)
T TIGR00891 6 LTRAQWNAFSAAWLGWLLDAFDFFLVAL-VLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRY-GRRLPMVTS 83 (405)
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHH
Confidence 4566788777777788887777765544 45677889999999999999999999999999999999998 999999999
Q ss_pred HHHHHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCch
Q 016902 143 TTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKD 222 (380)
Q Consensus 143 ~~l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~ 222 (380)
.++..++.+++.++ .+...+++++++.|++.++..+...++..|.+++++
T Consensus 84 ~~~~~~~~~~~~~~----------------------------~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~-- 133 (405)
T TIGR00891 84 IVLFSAGTLACGFA----------------------------PGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHL-- 133 (405)
T ss_pred HHHHHHHHHHHHHh----------------------------ccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhh--
Confidence 98888888777654 346678889999999999999999999999999877
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcch--hhHHHHHHHHHHHHH
Q 016902 223 YKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHG--WGSAFGALAIAMGIS 272 (380)
Q Consensus 223 ~~~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~~~g--w~~~f~i~~~~~~~~ 272 (380)
|+...++++.+..+|..+++.+.+.+.+..+ |++.|++.++..++.
T Consensus 134 ----~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~ 181 (405)
T TIGR00891 134 ----RNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFA 181 (405)
T ss_pred ----hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHH
Confidence 9999999999999999999999988877665 999998765554443
No 23
>PRK10504 putative transporter; Provisional
Probab=99.68 E-value=5.3e-15 Score=148.88 Aligned_cols=176 Identities=12% Similarity=0.024 Sum_probs=147.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHH
Q 016902 68 WIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYL 147 (380)
Q Consensus 68 ~~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~ 147 (380)
.+..+.+.+..++..+..+.+...++.|. +++|.+..+.+++.+.+.++..++.+++|+++|++ |||++++++.+++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~ 86 (471)
T PRK10504 9 RWQLWIVAFGFFMQSLDTTIVNTALPSMA-QSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRV-GVRNIFFTAIVLFT 86 (471)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHH-HHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHHH
Confidence 34567777777888888877777776665 57999999999999999999999999999999998 99999999988888
Q ss_pred HHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhh
Q 016902 148 AGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHL 227 (380)
Q Consensus 148 lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r 227 (380)
++.+++.++ .+...+++++++.|+|.++..+...++..|.+|+++ |
T Consensus 87 ~~~~~~~~~----------------------------~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~ 132 (471)
T PRK10504 87 LGSLFCALS----------------------------GTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQ------Y 132 (471)
T ss_pred HHHHHHHHh----------------------------CCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHH------H
Confidence 877765553 246678889999999999999999999999998665 8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHHhh
Q 016902 228 DRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIG 279 (380)
Q Consensus 228 ~~~~~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~~~~~ 279 (380)
++.+++++...++|..+++.+++++.+..||++.|++...+..+..++....
T Consensus 133 ~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~ 184 (471)
T PRK10504 133 MAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLML 184 (471)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999998999999998776665555544443
No 24
>PRK12382 putative transporter; Provisional
Probab=99.68 E-value=7.3e-15 Score=144.31 Aligned_cols=172 Identities=13% Similarity=0.026 Sum_probs=136.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHH
Q 016902 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (380)
Q Consensus 71 ~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~ 150 (380)
.+.+.+..++..+........++.|+.+++|++..+.+++.+.+.++..++.+++|+++||+ |||++++++.++..++.
T Consensus 17 ~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~~~~~~ 95 (392)
T PRK12382 17 LFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQY-GAKRSALQGMLACGLAG 95 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhh-cchHHHHHHHHHHHHHH
Confidence 44444555555555555566677789999999999999999999999999999999999998 99999999988777665
Q ss_pred HHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhH
Q 016902 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (380)
Q Consensus 151 ~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~ 230 (380)
+...+....+.. ...+...+++++++.|+|.+...+...+++.|.+|+++ |+++
T Consensus 96 ~~~~~~~~~~~~--------------------~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~a 149 (392)
T PRK12382 96 LAYLLAAILPVS--------------------APFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKH------SGKV 149 (392)
T ss_pred HHHHhhhccccc--------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccc------cchh
Confidence 544332211100 00356778999999999999888888889999999777 9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHH
Q 016902 231 FNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAM 269 (380)
Q Consensus 231 ~~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~ 269 (380)
++++..+.++|..+++.+++++.+..||++.+.+..+..
T Consensus 150 ~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~ 188 (392)
T PRK12382 150 MSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLP 188 (392)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHH
Confidence 999999999999999999999988889998776654443
No 25
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.68 E-value=7.3e-15 Score=144.39 Aligned_cols=174 Identities=14% Similarity=0.106 Sum_probs=140.9
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHH
Q 016902 66 GGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTI 145 (380)
Q Consensus 66 ~~~~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l 145 (380)
+.+|..+.+....++..+..+..... ..++.+++|++..+.+++.+.+.++..++.++.|+++||+ |||++++++.++
T Consensus 5 ~~~~~l~~~~~~~~~~~~~~~~~~p~-~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-grr~~~~~~~~~ 82 (394)
T PRK11652 5 RNVNLLFMLVLLVAVGQMAQTIYVPA-IADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRV-GRRPVILVGMSI 82 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcc-HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHH
Confidence 35666666666666666665544443 4456788999999999999999999999999999999998 999999999988
Q ss_pred HHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhh
Q 016902 146 YLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKT 225 (380)
Q Consensus 146 ~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~ 225 (380)
..++.+++..+ .+...+++.+++.|++.+...+....+..|.++.++
T Consensus 83 ~~~~~~~~~~~----------------------------~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----- 129 (394)
T PRK11652 83 FILGTLVALFA----------------------------HSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQ----- 129 (394)
T ss_pred HHHHHHHHHHH----------------------------ccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHH-----
Confidence 88887776653 346678889999999988877777788888887655
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHH
Q 016902 226 HLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNML 275 (380)
Q Consensus 226 ~r~~~~~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~ 275 (380)
++...+++..+..+|..++|.+++++.+..||++.|++.+++.++..++
T Consensus 130 -~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~ 178 (394)
T PRK11652 130 -LRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFS 178 (394)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHH
Confidence 8888889999999999999999999988889999999877665544333
No 26
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.67 E-value=8.1e-15 Score=144.48 Aligned_cols=176 Identities=17% Similarity=0.170 Sum_probs=146.5
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHH
Q 016902 65 TGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTT 144 (380)
Q Consensus 65 ~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~ 144 (380)
+.+|..+....+..+++.+..+..... ...+.+++|++..+.+++.+.+.++..++.++.|+++||+ |||+++.++.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~ 88 (406)
T PRK11551 11 SRLALTIGLCFLVALLEGLDLQSAGVA-APRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRI-GRKRILIVSVA 88 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHHH
Confidence 456777777777777777776655444 4556778999999999999999999999999999999998 99999999998
Q ss_pred HHHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhh
Q 016902 145 IYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYK 224 (380)
Q Consensus 145 l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~ 224 (380)
+..++.+++.+. .+...+++.+++.|++.+...+...++.+|.+++++
T Consensus 89 ~~~~~~~~~~~~----------------------------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~---- 136 (406)
T PRK11551 89 LFGLFSLATAQA----------------------------WDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRL---- 136 (406)
T ss_pred HHHHHHHHHHHh----------------------------ccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHH----
Confidence 888777666553 346678889999999999999999999999999777
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHH
Q 016902 225 THLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLF 276 (380)
Q Consensus 225 ~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~~ 276 (380)
|++.+++++....+|..+++.++.++.+..+|++.|++.+++.++..++.
T Consensus 137 --r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (406)
T PRK11551 137 --RGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLL 186 (406)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998888888899999988776655444433
No 27
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.67 E-value=8.9e-15 Score=143.10 Aligned_cols=156 Identities=13% Similarity=0.116 Sum_probs=123.0
Q ss_pred HHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCC
Q 016902 88 LSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQD 167 (380)
Q Consensus 88 i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~~~~ 167 (380)
......+.+.+++|++..+.+++.+.+.+++.++.+++|+++||+ |||++++.+.+....+.+. ....
T Consensus 9 ~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~~-~~~~---------- 76 (368)
T TIGR00903 9 TFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRA-FKRWFLFGSLATFAAAAGR-LLDP---------- 76 (368)
T ss_pred HHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cchHHHHHHHHHHHHHHHH-HHHh----------
Confidence 344455677889999999999999999999999999999999998 9998876555544444322 2210
Q ss_pred cccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHH
Q 016902 168 NCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFT 247 (380)
Q Consensus 168 ~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~ 247 (380)
.+...++++|++.|+|.+.. .+.....+|.+|+++ |++.+++++.+..+|..+++.
T Consensus 77 -----------------~~~~~l~~~R~l~G~g~~~~-~~~~~~~~~~~~~~~------r~~a~~~~~~~~~lG~~l~~~ 132 (368)
T TIGR00903 77 -----------------FNYEWLLACQLLAALGQPFL-LNAFAPAASQIREER------RDLVISLLSFAMYLGIIFALA 132 (368)
T ss_pred -----------------ccHHHHHHHHHHHHhHhHHH-HHHHHHHHHHcCHHH------HHHHHHHHHHHHHHHHHHHHH
Confidence 24678999999999998864 455556689999766 999999999999999999999
Q ss_pred HHHHhhhcchhhHHHHHHHHHHHHHHHHHHhh
Q 016902 248 LVVYIQMEHGWGSAFGALAIAMGISNMLFFIG 279 (380)
Q Consensus 248 i~~~i~~~~gw~~~f~i~~~~~~~~~i~~~~~ 279 (380)
+++++.+..|||+.|++.+++.++..++.+..
T Consensus 133 ~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~ 164 (368)
T TIGR00903 133 AGLKIYTAGGLQLLIIPIAAVAAAGIILVLAA 164 (368)
T ss_pred HHHHHHHccchHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988999999988666655554444333
No 28
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.66 E-value=3.2e-15 Score=157.10 Aligned_cols=156 Identities=14% Similarity=0.050 Sum_probs=129.4
Q ss_pred HHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCC
Q 016902 88 LSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQD 167 (380)
Q Consensus 88 i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~~~~ 167 (380)
+...+.+++..++|++..+.+++.+.+.++..++.+++|+++||+ |||++++++.++..++.+++.++
T Consensus 185 ~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~-GRR~~lii~lil~~i~~ll~afa----------- 252 (742)
T TIGR01299 185 VVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKL-GRKQCLLICLSVNGFFAFFSSFV----------- 252 (742)
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHH-----------
Confidence 344566778889999999999999999999999999999999998 99999999999888888777664
Q ss_pred cccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHH
Q 016902 168 NCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFT 247 (380)
Q Consensus 168 ~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~ 247 (380)
.+...++++|++.|+|.|+..++..++++|.+|.+. |+..++++.....+|.++++.
T Consensus 253 -----------------~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~------Rg~~~g~~~~~~~iG~ila~~ 309 (742)
T TIGR01299 253 -----------------QGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEK------RGEHLSWLCMFWMIGGIYAAA 309 (742)
T ss_pred -----------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH------HHHHHHHHHHHHHHHHHHHHH
Confidence 356788899999999999999999999999999777 999999988888899888887
Q ss_pred HHHHhhhc-------------chhhHHHHHHHHHHHHHHHHHHh
Q 016902 248 LVVYIQME-------------HGWGSAFGALAIAMGISNMLFFI 278 (380)
Q Consensus 248 i~~~i~~~-------------~gw~~~f~i~~~~~~~~~i~~~~ 278 (380)
++.++... .+||+.|++.++..++++++.++
T Consensus 310 la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~ 353 (742)
T TIGR01299 310 MAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTF 353 (742)
T ss_pred HHHHHHHhccchhccccccccccHHHHHHHHHHHHHHHHHHHHH
Confidence 76555432 35888888776665555444333
No 29
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.65 E-value=2.1e-14 Score=139.06 Aligned_cols=164 Identities=16% Similarity=0.081 Sum_probs=128.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHH
Q 016902 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (380)
Q Consensus 71 ~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~ 150 (380)
.+..++..++.....+.+...++.|+++++|++..+.+++.+.+.++..++.+++|+++||+ |||++++++.++..++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~i~~ 81 (366)
T TIGR00886 3 LFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKF-GPRYTTTLSLLLLAIPC 81 (366)
T ss_pred hHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHH
Confidence 34455555555666666666666679999999999999999999999999999999999998 99999999999999988
Q ss_pred HHHHhhhhcccCCCCCCcccccccccCCCCCCcch-hHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhh
Q 016902 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSW-QMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (380)
Q Consensus 151 ~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~-~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~ 229 (380)
+++.++ . +...+++++++.|++.+. .....++.+|.+++++ |+.
T Consensus 82 ~~~~~~----------------------------~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~------r~~ 126 (366)
T TIGR00886 82 LWAGLA----------------------------VQSYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKI------QGT 126 (366)
T ss_pred HHHHHH----------------------------hhhHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhh------hhH
Confidence 877764 3 567788899999998654 4567789999999776 899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhh----------cchhhHHH-HHHHHHHH
Q 016902 230 FFNFFYLSVTVGAIVAFTLVVYIQM----------EHGWGSAF-GALAIAMG 270 (380)
Q Consensus 230 ~~~~~~~~~~iG~~i~~~i~~~i~~----------~~gw~~~f-~i~~~~~~ 270 (380)
..+++....++|..+++.+++.+.. ..+|++.| .+.+++..
T Consensus 127 ~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 178 (366)
T TIGR00886 127 ALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILL 178 (366)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHHH
Confidence 9998887777777777666655443 24799999 44344433
No 30
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.65 E-value=1.5e-14 Score=142.30 Aligned_cols=177 Identities=10% Similarity=-0.049 Sum_probs=144.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHH
Q 016902 68 WIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYL 147 (380)
Q Consensus 68 ~~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~ 147 (380)
++.+..+.+..++..+........++.|+.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||++++++.+++.
T Consensus 14 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~~~ 92 (399)
T PRK05122 14 TLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTL-GPKKAVVFGLCGCA 92 (399)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhcc-CCcchHHHHHHHHH
Confidence 34466666677777777666677788889999999999999999999999999999999999998 99999999999888
Q ss_pred HHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhh
Q 016902 148 AGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHL 227 (380)
Q Consensus 148 lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r 227 (380)
++.+.+.++...... ...+...++++|++.|+|.+...++...+..|.+++++ |
T Consensus 93 ~~~~~~~~~~~~~~~--------------------~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------r 146 (399)
T PRK05122 93 LSGLLYLLAGLLAAW--------------------PVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALH------T 146 (399)
T ss_pred HHHHHHHHhhhhhcc--------------------chhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhh------h
Confidence 877666554211000 00245678889999999999999999999999998877 8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHH
Q 016902 228 DRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGI 271 (380)
Q Consensus 228 ~~~~~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~ 271 (380)
++.++++..+..+|..+++.+++++.+..||++.+++.+++.++
T Consensus 147 ~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~ 190 (399)
T PRK05122 147 GRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALL 190 (399)
T ss_pred ccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHH
Confidence 99999988899999999999999998889999988776555443
No 31
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.65 E-value=1.3e-14 Score=143.85 Aligned_cols=167 Identities=16% Similarity=0.187 Sum_probs=141.8
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHH
Q 016902 66 GGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTI 145 (380)
Q Consensus 66 ~~~~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l 145 (380)
.+|+......+..+...+..+.. ..+..++++++|++..+.+++.+.+.++..++.+++|+++||+ |||+++.++.++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~-g~r~~l~~~~~~ 92 (426)
T PRK12307 15 PQKNALFSAWLGYVFDGFDFMLI-FYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKF-GRKPLMMWSIVA 92 (426)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHH-HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHH
Confidence 44555566666666666655543 4456678889999999999999999999999999999999998 999999999999
Q ss_pred HHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhh
Q 016902 146 YLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKT 225 (380)
Q Consensus 146 ~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~ 225 (380)
..++.+++.++ .+...+++++++.|+|.|+..+....+..|.++++.
T Consensus 93 ~~~~~~~~~~~----------------------------~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~----- 139 (426)
T PRK12307 93 YSVGTGLSGLA----------------------------SGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHL----- 139 (426)
T ss_pred HHHHHHHHHHH----------------------------hHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhH-----
Confidence 99988877765 357788999999999999999999999999999877
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHH
Q 016902 226 HLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIA 268 (380)
Q Consensus 226 ~r~~~~~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~ 268 (380)
|+.+.+++..+..+|..+++.+.+++.+..||++.|++.++.
T Consensus 140 -r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~~ 181 (426)
T PRK12307 140 -KSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLP 181 (426)
T ss_pred -hhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHHH
Confidence 899999999999999999999999988888999999875443
No 32
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.65 E-value=7.2e-15 Score=148.04 Aligned_cols=173 Identities=16% Similarity=0.125 Sum_probs=143.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHH
Q 016902 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (380)
Q Consensus 71 ~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~ 150 (380)
...+++..++..+... +.....+++.+++|.+..+.+++.+.+.++..++.+++|+++||+ |||++++++.+++.++.
T Consensus 4 ~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~ 81 (485)
T TIGR00711 4 TIVLMLGTFMAVLDST-IVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRF-GTRRLFLISTFAFTLGS 81 (485)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHh-CcHHHHHHHHHHHHHHH
Confidence 3444445555555544 334455667789999999999999999999999999999999998 99999999999999988
Q ss_pred HHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhH
Q 016902 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (380)
Q Consensus 151 ~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~ 230 (380)
+++..+ .+...+++++++.|++.+...+...+++.|.+|+++ |+.+
T Consensus 82 ~~~~~~----------------------------~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~------r~~~ 127 (485)
T TIGR00711 82 LLCGVA----------------------------PNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEK------RGRA 127 (485)
T ss_pred HHHhCc----------------------------CCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHH------HHHH
Confidence 877654 356778899999999999999999999999999766 9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHHhh
Q 016902 231 FNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIG 279 (380)
Q Consensus 231 ~~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~~~~~ 279 (380)
+++++....+|..+++.+++++.++.||++.|++.+.+.++.+++....
T Consensus 128 ~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~ 176 (485)
T TIGR00711 128 MAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFI 176 (485)
T ss_pred HHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998776665555444333
No 33
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.64 E-value=1.7e-14 Score=144.04 Aligned_cols=167 Identities=11% Similarity=0.037 Sum_probs=136.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHH
Q 016902 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (380)
Q Consensus 70 ~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg 149 (380)
..+..++..++..+..+.+...++ .+.+++|++..+.+++.+.+.++..++.+++|+++||+ |||+++.++.++..++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~~~~~~~~~~~~ 101 (434)
T PRK11663 24 ILITMYLGYALFYFTRKSFNAAMP-EMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRS-NARYFMGIGLIATGII 101 (434)
T ss_pred HHHHHHHHHHHHHHhhhhHHHhhH-HHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhc-CCchhHHHHHHHHHHH
Confidence 333444444444444444444444 45567999999999999999999999999999999998 9999999999998888
Q ss_pred HHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhh
Q 016902 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (380)
Q Consensus 150 ~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~ 229 (380)
.+++.++ .+...+++.+++.|++.|...+....+++|.+++++ |+.
T Consensus 102 ~~~~~~~----------------------------~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~------rg~ 147 (434)
T PRK11663 102 NILFGFS----------------------------SSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTE------RGG 147 (434)
T ss_pred HHHHHHH----------------------------hHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHH------HHH
Confidence 8777664 356677788888899888888889999999999776 999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHH
Q 016902 230 FFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGIS 272 (380)
Q Consensus 230 ~~~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~ 272 (380)
.+++++.+.++|..+++.+.+++.+..||++.|++.++..++.
T Consensus 148 ~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~ 190 (434)
T PRK11663 148 WWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVV 190 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998899999998877655444
No 34
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.64 E-value=5e-14 Score=140.57 Aligned_cols=178 Identities=16% Similarity=0.209 Sum_probs=127.1
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcC---CCHHHHHHHHHHH---HHHHHHHHHHHHHHHHhhcchhHHHH
Q 016902 67 GWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMH---KSFADSSNAVNNF---LGISQASSVLGGFLADAYLGRYWTIA 140 (380)
Q Consensus 67 ~~~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~---~s~~~a~~~~~~~---~~~~~~~~l~~g~lsD~~~GR~~~i~ 140 (380)
+++.+....+..+++.+..+. .+.+..++.++++ .+..+.+.....+ .++..++.+++|+++||+ |||+++.
T Consensus 20 ~~~~~~~~~~~~~~~~~d~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~-Grr~~l~ 97 (432)
T PRK10406 20 RIWAIVGASSGNLVEWFDFYV-YSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKH-GRKKSML 97 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHH
Confidence 344444444556666666554 4556678888874 4555433333333 344458899999999998 9999999
Q ss_pred HHHHHHHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCC
Q 016902 141 IFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERS 220 (380)
Q Consensus 141 i~~~l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~ 220 (380)
++.+++.++.++++++....... ......+++.|++.|+|.|+..+...++++|.+|+++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~ 157 (432)
T PRK10406 98 ISVCMMCFGSLVIACLPGYETIG--------------------TWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGR 157 (432)
T ss_pred HHHHHHHHHHHHHhhcCCchhHH--------------------HHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCc
Confidence 99999999988877641100000 0124568889999999999999999999999999877
Q ss_pred chhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhh--------hcchhhHHHHHHHHHHHHH
Q 016902 221 KDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQ--------MEHGWGSAFGALAIAMGIS 272 (380)
Q Consensus 221 ~~~~~~r~~~~~~~~~~~~iG~~i~~~i~~~i~--------~~~gw~~~f~i~~~~~~~~ 272 (380)
|+.+.++.+.+.++|..+++.+...+. ...|||+.|++.++..++.
T Consensus 158 ------rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~ 211 (432)
T PRK10406 158 ------KGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVA 211 (432)
T ss_pred ------ccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHH
Confidence 898888888888888888776655443 2579999999876655443
No 35
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.64 E-value=1.1e-13 Score=139.85 Aligned_cols=175 Identities=15% Similarity=0.106 Sum_probs=129.4
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHH
Q 016902 67 GWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIY 146 (380)
Q Consensus 67 ~~~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~ 146 (380)
+++.+.......++..+..+++. .+..++.+++|++..+.+++.+.+.++..++.+++|+++||+ |||+++.++.++.
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-G~r~~~~~~~~~~ 111 (476)
T PLN00028 34 HMRAFHLSWISFFTCFVSTFAAA-PLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLY-GPRYGSAFLLMLT 111 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHH
Confidence 34555555555555555555444 345678889999999999998889999999999999999998 9999999988888
Q ss_pred HHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhh
Q 016902 147 LAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTH 226 (380)
Q Consensus 147 ~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~ 226 (380)
.++.+++.++ .+...+++++++.|++.+... ....+++|.+|.+.
T Consensus 112 ~~~~~~~~~~----------------------------~s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~------ 156 (476)
T PLN00028 112 APAVFCMSLV----------------------------SSATGFIAVRFFIGFSLATFV-SCQYWMSTMFNGKI------ 156 (476)
T ss_pred HHHHHHHHHh----------------------------cCHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcChhh------
Confidence 8877766654 245667788889999887654 34567899999877
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHh----hhc-----chhhHHHHHHHHHHHHHHHHHHh
Q 016902 227 LDRFFNFFYLSVTVGAIVAFTLVVYI----QME-----HGWGSAFGALAIAMGISNMLFFI 278 (380)
Q Consensus 227 r~~~~~~~~~~~~iG~~i~~~i~~~i----~~~-----~gw~~~f~i~~~~~~~~~i~~~~ 278 (380)
|+.++++++...++|+.+++.+.+.+ .+. .|||+.|++.+++.++..++.++
T Consensus 157 rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~ 217 (476)
T PLN00028 157 VGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLT 217 (476)
T ss_pred eeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999998777777777665555443 222 48999999887776655444333
No 36
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.64 E-value=2.3e-14 Score=140.54 Aligned_cols=176 Identities=14% Similarity=0.123 Sum_probs=144.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHH
Q 016902 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (380)
Q Consensus 70 ~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg 149 (380)
.++.+.+..++..+..+.+...+ +.+.+++|++..+.+...+.+..+..++.++.|+++||+ |||+++.++.++..++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~ 81 (382)
T PRK10091 4 VILSLALGTFGLGMAEFGIMGVL-TELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRY-SLKHILLFLVALCVIG 81 (382)
T ss_pred hHHHHHHHHHHHHhhHHHHHhCh-HHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccC-ccHHHHHHHHHHHHHH
Confidence 35556666666666665555544 557789999999999999999999999999999999998 9999999999999998
Q ss_pred HHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhh
Q 016902 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (380)
Q Consensus 150 ~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~ 229 (380)
.+++..+ .+...+++++++.|++.+...+....+..|.+++++ |+.
T Consensus 82 ~~l~~~~----------------------------~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------~~~ 127 (382)
T PRK10091 82 NAMFTLS----------------------------SSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGK------VTA 127 (382)
T ss_pred HHHHHHh----------------------------CcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHH------hhH
Confidence 8877764 357788999999999999888888888899988766 888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHHhhcc
Q 016902 230 FFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTP 281 (380)
Q Consensus 230 ~~~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~~~~~~~ 281 (380)
.++++..+..+|..+++.+++++.+..||++.|++.++..++..+..+...|
T Consensus 128 ~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp 179 (382)
T PRK10091 128 AVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVP 179 (382)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 8999888999999999999999988889999999887766555444333333
No 37
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.63 E-value=3.4e-14 Score=143.76 Aligned_cols=169 Identities=14% Similarity=0.215 Sum_probs=142.7
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHH
Q 016902 65 TGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTT 144 (380)
Q Consensus 65 ~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~ 144 (380)
+.+|+.+..+.+..++..+..+.+ ..+..++.+++|++..+.+++.+.+.++..++.+++|+++||+ |||++++++.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~ 93 (496)
T PRK03893 16 RAQWKAFSAAWLGYLLDGFDFVLI-TLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRY-GRRLAMVISIV 93 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHH
Confidence 345666666666666666665544 4455678889999999999999999999999999999999998 99999999999
Q ss_pred HHHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhh
Q 016902 145 IYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYK 224 (380)
Q Consensus 145 l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~ 224 (380)
+..++.+++.++ .+...+++++++.|++.++..+....+..|.++.++
T Consensus 94 ~~~~~~~~~~~~----------------------------~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~---- 141 (496)
T PRK03893 94 LFSVGTLACGFA----------------------------PGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHL---- 141 (496)
T ss_pred HHHHHHHHHHHH----------------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH----
Confidence 998888887764 356778889999999999999999999999999766
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHH
Q 016902 225 THLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAM 269 (380)
Q Consensus 225 ~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~ 269 (380)
|+..+++++.+..+|..+++.+.+++.+..+|++.|++.++..
T Consensus 142 --r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~~ 184 (496)
T PRK03893 142 --RNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILPI 184 (496)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHH
Confidence 8999999999999999999999999998899999998754433
No 38
>TIGR00895 2A0115 benzoate transport.
Probab=99.62 E-value=1.9e-14 Score=140.23 Aligned_cols=175 Identities=16% Similarity=0.110 Sum_probs=142.0
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHH
Q 016902 65 TGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTT 144 (380)
Q Consensus 65 ~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~ 144 (380)
+.+|+.+...++..+...+..+ ......+++.+++|++..+.+.+.+.+.++..++.++.|+++||+ |||+++.++.+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~ 90 (398)
T TIGR00895 13 RYQWRAIILSFLIMLMDGYDLA-AMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRI-GRKRVLLWSIL 90 (398)
T ss_pred chHHHHHHHHHHHHHHHHHHHH-HHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHh-hhHHHHHHHHH
Confidence 3445555555555555544444 334456677788999999999999999999999999999999998 99999999998
Q ss_pred HHHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhh
Q 016902 145 IYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYK 224 (380)
Q Consensus 145 l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~ 224 (380)
+..++.+++.+. .+...+++++++.|++.+...+...++.+|.+|++.
T Consensus 91 ~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---- 138 (398)
T TIGR00895 91 LFSVFTLLCALA----------------------------TNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRF---- 138 (398)
T ss_pred HHHHHHHHHHHc----------------------------cchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHh----
Confidence 888887776653 245677888999999999999999999999999776
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHH
Q 016902 225 THLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNML 275 (380)
Q Consensus 225 ~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~ 275 (380)
|+..++++..+..+|..+++.+.+++.+..||++.|++.+++..+..++
T Consensus 139 --r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~ 187 (398)
T TIGR00895 139 --RGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLL 187 (398)
T ss_pred --hchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHH
Confidence 9999999999999999999999999998899999998875554444333
No 39
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.62 E-value=8.7e-14 Score=136.66 Aligned_cols=166 Identities=16% Similarity=0.104 Sum_probs=135.1
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhh
Q 016902 77 NEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLC 156 (380)
Q Consensus 77 ~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~ 156 (380)
..+....++...... .+.+.+++|.+..+.++..+.+..+..++.++.|+++||+ |||+.++++.+++.++.+++..+
T Consensus 11 ~~~~~~~~~~~~~~~-lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~i~~~~~~~~ 88 (392)
T PRK10473 11 LVLLYPAGIDMYLVG-LPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRS-GRKPVAIPGAALFIIASLLCSLA 88 (392)
T ss_pred HHHHHHHHHHHHhhh-HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHh-CChHHHHHHHHHHHHHHHHHHHh
Confidence 333444444433443 4456678999999999999999999999999999999998 99999999998888888776653
Q ss_pred hhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHH
Q 016902 157 ATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYL 236 (380)
Q Consensus 157 ~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~ 236 (380)
.+...+++++++.|++.+...+...++..|.+++++ |++.+++++.
T Consensus 89 ----------------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~~~ 134 (392)
T PRK10473 89 ----------------------------ETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRR------RAKVLSLLNG 134 (392)
T ss_pred ----------------------------CcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHH------HHHHHHHHHH
Confidence 245667888999999999888889999999999777 9999999999
Q ss_pred HHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHHh
Q 016902 237 SVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (380)
Q Consensus 237 ~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~~~~ 278 (380)
..++|..++|.+++++.+..||++.|++.+++.++..++.+.
T Consensus 135 ~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~ 176 (392)
T PRK10473 135 ITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLF 176 (392)
T ss_pred HHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998888889999998877766555544333
No 40
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.62 E-value=3.9e-14 Score=136.81 Aligned_cols=152 Identities=14% Similarity=0.050 Sum_probs=128.3
Q ss_pred HhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCcc
Q 016902 90 VNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNC 169 (380)
Q Consensus 90 ~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~~~~~c 169 (380)
+.+.+++.+++|++..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++..++.++++++
T Consensus 23 ~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~-G~r~~~~~~~~~~~~~~~~~~~~------------- 88 (377)
T TIGR00890 23 TLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKF-GPRAVAMLGGILYGLGFTFYAIA------------- 88 (377)
T ss_pred hhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHc-CccchhHHhHHHHHHHHHHHHHH-------------
Confidence 4466788899999999999999999999999999999999998 99999999999999998887765
Q ss_pred cccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 016902 170 DRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLV 249 (380)
Q Consensus 170 ~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~ 249 (380)
.+...+++++.+.|++.+...++......+.++ ++ |+...+++..+..+|..+++.+.
T Consensus 89 ---------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~~~~g~~~~~~~~ 146 (377)
T TIGR00890 89 ---------------DSLAALYLTYGLASAGVGIAYGIALNTAVKWFP-DK------RGLASGIIIGGYGLGSFILSPLI 146 (377)
T ss_pred ---------------HHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cc------cHHHHHHHHHhcchhHhHHHHHH
Confidence 467778889999999998887777778888776 34 88899999999999988776677
Q ss_pred HHhhhcchhhHHHHHHHHHHHHHHHHHH
Q 016902 250 VYIQMEHGWGSAFGALAIAMGISNMLFF 277 (380)
Q Consensus 250 ~~i~~~~gw~~~f~i~~~~~~~~~i~~~ 277 (380)
+.+.+..||++.|++.+++.++..+..+
T Consensus 147 ~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 174 (377)
T TIGR00890 147 TSVINLEGVPAAFIYMGIIFLLVIVLGA 174 (377)
T ss_pred HHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 7777778999999988777665554443
No 41
>PRK11043 putative transporter; Provisional
Probab=99.62 E-value=8.7e-14 Score=137.08 Aligned_cols=149 Identities=17% Similarity=0.206 Sum_probs=126.1
Q ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCccccccc
Q 016902 95 FMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQ 174 (380)
Q Consensus 95 yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~ 174 (380)
.+.+++|.+..+.++..+.+.++..++.+++|+++||+ |||+++.++.++..++.+++..+
T Consensus 31 ~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~------------------ 91 (401)
T PRK11043 31 AIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRY-GRKPVLLAGLSLFALGSLGMLWV------------------ 91 (401)
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhc-CCcHHHHHHHHHHHHHHHHHHHh------------------
Confidence 36789999999999999999999999999999999998 99999999988888877776653
Q ss_pred ccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhh
Q 016902 175 LLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQM 254 (380)
Q Consensus 175 ~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~ 254 (380)
.+...+++++++.|+|.+...+...++..|.++++. ++..++..+....+|..++|.+++++.+
T Consensus 92 ----------~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~g~~i~~~l~~ 155 (401)
T PRK11043 92 ----------ESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQK------ANRVFATIMPLVALSPALAPLLGAWLLN 155 (401)
T ss_pred ----------cCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 346678888999999988877777888999998765 7777888777888999999999999999
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHh
Q 016902 255 EHGWGSAFGALAIAMGISNMLFFI 278 (380)
Q Consensus 255 ~~gw~~~f~i~~~~~~~~~i~~~~ 278 (380)
..||++.|++.+++.++..++.+.
T Consensus 156 ~~g~~~~~~~~~~~~~~~~~~~~~ 179 (401)
T PRK11043 156 HFGWQAIFATLFAITLLLILPTLR 179 (401)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHH
Confidence 899999998877766655544433
No 42
>PRK03699 putative transporter; Provisional
Probab=99.62 E-value=1.1e-13 Score=136.26 Aligned_cols=175 Identities=7% Similarity=0.054 Sum_probs=140.9
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHH
Q 016902 65 TGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTT 144 (380)
Q Consensus 65 ~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~ 144 (380)
..+||..+...+..++.....+.+...+ ..+.+++|++..+.+.+.+.+.++..++.+++|+++||+ |||+++.++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~-g~r~~~~~~~~ 80 (394)
T PRK03699 3 SNRIKLTWISFLSYALTGALVIVTGMVM-GPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEII-PLKRQLIFGFA 80 (394)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhhh-HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHH
Confidence 3456666666666666666555454444 446778999999999999999999999999999999998 99999999998
Q ss_pred HHHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhh
Q 016902 145 IYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYK 224 (380)
Q Consensus 145 l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~ 224 (380)
+..++.+++.++ .+...+++++++.|++.|...++..+++.|.+|+++
T Consensus 81 ~~~i~~~l~~~~----------------------------~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~---- 128 (394)
T PRK03699 81 LMILAVAGLMFS----------------------------HSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQ---- 128 (394)
T ss_pred HHHHHHHHHHHc----------------------------chHHHHHHHHHHHHHhhHhhccchhHHhhhhcccch----
Confidence 888888777664 356678889999999999888888899999998766
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHhhh-cchhhHHHHHHHHHHHHHHHH
Q 016902 225 THLDRFFNFFYLSVTVGAIVAFTLVVYIQM-EHGWGSAFGALAIAMGISNML 275 (380)
Q Consensus 225 ~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~-~~gw~~~f~i~~~~~~~~~i~ 275 (380)
|+..++..+....+|+.++|.+.+++.. ..||++.|.+.+++.++..++
T Consensus 129 --r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~ 178 (394)
T PRK03699 129 --RGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFIL 178 (394)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHH
Confidence 8888888888888898999988887754 579999998877665554443
No 43
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.61 E-value=5.4e-14 Score=137.03 Aligned_cols=155 Identities=17% Similarity=0.238 Sum_probs=132.3
Q ss_pred HHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCC
Q 016902 88 LSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQD 167 (380)
Q Consensus 88 i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~~~~ 167 (380)
+...++.+. +++|++..+.+...+.+.++..++.+++|+++||+ |||+++.++.++..++.+++...
T Consensus 10 ~~p~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~i~~~~~~~~----------- 76 (377)
T PRK11102 10 YLPALPVIA-ADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSF-GRKPVILGGTLVFALAAVACALA----------- 76 (377)
T ss_pred HhccHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhc-CChHHHHHHHHHHHHHHHHHHHH-----------
Confidence 334455544 57999999999999999999999999999999998 99999999999988888877664
Q ss_pred cccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHH
Q 016902 168 NCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFT 247 (380)
Q Consensus 168 ~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~ 247 (380)
.+...+++.+++.|++.+...+...++..|.+++++ |++.+++++....+|..+++.
T Consensus 77 -----------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~~ 133 (377)
T PRK11102 77 -----------------QTIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEE------FSRMMSFVTLVMTIAPLLAPI 133 (377)
T ss_pred -----------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHHHHHHHHH
Confidence 346677888999999999988999999999999777 999999999999999999999
Q ss_pred HHHHhhhcchhhHHHHHHHHHHHHHHHHHHh
Q 016902 248 LVVYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (380)
Q Consensus 248 i~~~i~~~~gw~~~f~i~~~~~~~~~i~~~~ 278 (380)
+++++.+..+|++.|++.+++.++..++...
T Consensus 134 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (377)
T PRK11102 134 IGGWLLVWFSWHAIFWVLALAAILAAALVFF 164 (377)
T ss_pred HHHHHHHHcChHHHHHHHHHHHHHHHHHHHH
Confidence 9999998889999998877766655544433
No 44
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.60 E-value=2.9e-13 Score=133.14 Aligned_cols=171 Identities=12% Similarity=-0.011 Sum_probs=135.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHH-----HHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHH
Q 016902 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFAD-----SSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTI 145 (380)
Q Consensus 71 ~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~-----a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l 145 (380)
...+++..++..++++.....++.|++ ++|++..+ .+.+.+++.++..++.++.|+++||+ |||+++.++.++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~ 93 (408)
T PRK09874 16 LTVAWLGCFLTGAAFSLVMPFLPLYVE-QLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRK-GRKIMLLRSALG 93 (408)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHH-HhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-CcHHHHHHHHHH
Confidence 455556667777777666677777764 68888554 36778888899999999999999998 999999999888
Q ss_pred HHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhh
Q 016902 146 YLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKT 225 (380)
Q Consensus 146 ~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~ 225 (380)
..++.+++... .+...+++.+++.|++.+ ..+....+..|.+++++
T Consensus 94 ~~~~~~~~~~~----------------------------~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~----- 139 (408)
T PRK09874 94 MGIVMVLMGLA----------------------------QNIWQFLILRALLGLLGG-FVPNANALIATQVPRNK----- 139 (408)
T ss_pred HHHHHHHHHHH----------------------------hhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhh-----
Confidence 88877766553 356678888888888754 45677788889998766
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHHh
Q 016902 226 HLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (380)
Q Consensus 226 ~r~~~~~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~~~~ 278 (380)
|+...++++....+|..+++.+.+++.+..+|++.|++.+++.++..+..+.
T Consensus 140 -~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (408)
T PRK09874 140 -SGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLF 191 (408)
T ss_pred -hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999988889999999887776655554433
No 45
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.60 E-value=3.4e-14 Score=137.60 Aligned_cols=153 Identities=20% Similarity=0.183 Sum_probs=134.3
Q ss_pred hHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCccc
Q 016902 91 NMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCD 170 (380)
Q Consensus 91 ~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~~~~~c~ 170 (380)
...+++.+++|++..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++..++.+++.++
T Consensus 15 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~~~~~~~~~~-------------- 79 (399)
T TIGR00893 15 FAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRF-GARKTLAVFIVIWGVFTGLQAFA-------------- 79 (399)
T ss_pred HhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhc-CcceeeHHHHHHHHHHHHHHHHH--------------
Confidence 345568889999999999999999999999999999999998 99999999999988888877764
Q ss_pred ccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 016902 171 RISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVV 250 (380)
Q Consensus 171 ~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~~ 250 (380)
.+...+++++++.|+|.+...+....+..|.+|+++ |++.++++....++|..+++.+.+
T Consensus 80 --------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~ 139 (399)
T TIGR00893 80 --------------GAYVSLYILRVLLGAAEAPFFPGIILIVASWFPASE------RATAVSIFNSAQGLGGIIGGPLVG 139 (399)
T ss_pred --------------cCHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHH------HHHHHHHHHHhchHHHHHHHHHHH
Confidence 357788999999999999999999999999999776 999999999999999999999999
Q ss_pred HhhhcchhhHHHHHHHHHHHHHHHHHHh
Q 016902 251 YIQMEHGWGSAFGALAIAMGISNMLFFI 278 (380)
Q Consensus 251 ~i~~~~gw~~~f~i~~~~~~~~~i~~~~ 278 (380)
++.+..+|++.|++.+++.++..++.+.
T Consensus 140 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (399)
T TIGR00893 140 WILIHFSWQWAFIIEGVLGIIWGVLWLK 167 (399)
T ss_pred HHHHhCCchHHHHHHHHHHHHHHHHhhh
Confidence 9988899999999877766655544433
No 46
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.59 E-value=1.2e-13 Score=136.26 Aligned_cols=151 Identities=12% Similarity=0.113 Sum_probs=128.2
Q ss_pred HHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCCC
Q 016902 86 FGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPN 165 (380)
Q Consensus 86 ~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~~ 165 (380)
+.+.. ..+.+.+++|++..+.+++.+.+.++..++.++.|+++||+ |||+++.++.+++.++.+++.++
T Consensus 26 ~~~~~-~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~-G~r~~l~~~~~l~~~~~~~~~~a--------- 94 (393)
T PRK09705 26 TSVGP-LLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHV-SERRSVAISLLLIAVGALMRELY--------- 94 (393)
T ss_pred hccch-hHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHh-CchHHHHHHHHHHHHHHHHHHHC---------
Confidence 33433 44567889999999999999999999999999999999998 99999999999999999998875
Q ss_pred CCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHH
Q 016902 166 QDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVA 245 (380)
Q Consensus 166 ~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~ 245 (380)
.+...++++|++.|+|.+...++......+.++ ++ |+.+++++..+.++|..++
T Consensus 95 -------------------~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~------~~~~~g~~~~~~~~g~~~g 148 (393)
T PRK09705 95 -------------------PQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QR------TPLVMGLWSAALMGGGGLG 148 (393)
T ss_pred -------------------cchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-cc------chhHHHHHHHHHHHHHHHH
Confidence 346678899999999999999888899999886 55 8999999999999999999
Q ss_pred HHHHHHhhhcc-hhhHHHHHHHHHHHHHH
Q 016902 246 FTLVVYIQMEH-GWGSAFGALAIAMGISN 273 (380)
Q Consensus 246 ~~i~~~i~~~~-gw~~~f~i~~~~~~~~~ 273 (380)
+.+++++.++. +|++.+.+.++..++.+
T Consensus 149 ~~~~~~l~~~~~~w~~~~~~~~~~~~~~~ 177 (393)
T PRK09705 149 AAITPWLVQHSETWYQTLAWWALPAVVAL 177 (393)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 99999887765 79988766554444333
No 47
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.59 E-value=2.7e-14 Score=148.95 Aligned_cols=208 Identities=14% Similarity=0.102 Sum_probs=153.6
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHH
Q 016902 65 TGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTT 144 (380)
Q Consensus 65 ~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~ 144 (380)
..+++.+.+.+...++......++.....+.+.++|+++..+.+++.+.+.++..++.++.|+++||+ ||++.+.++.+
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~-~r~~~i~~g~l 106 (633)
T TIGR00805 28 FSKIKVFSLLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKL-HRPIVIGIGCA 106 (633)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhccc-CcceEEEecHH
Confidence 34556554555545555555566777777889999999999999999999999999999999999997 99999999999
Q ss_pred HHHHHHHHHHhhhhccc-CC-------------CCCCccccccc-------ccCCCCCCc--chhHHHHHHHHHHHHHhc
Q 016902 145 IYLAGLTGITLCATMKV-FM-------------PNQDNCDRISQ-------LLGSCEPAK--SWQMLYLYTVLYITGFGA 201 (380)
Q Consensus 145 l~~lg~~~l~l~~~~~~-l~-------------~~~~~c~~~~~-------~~~~c~~~~--~~~~~~l~~~l~l~g~g~ 201 (380)
++.+|.+++++...+.. .. ...+.|..... ....|...+ +....+++++|++.|+|.
T Consensus 107 l~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~ 186 (633)
T TIGR00805 107 IMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGA 186 (633)
T ss_pred HHHHHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccC
Confidence 99999999887532110 00 00012310000 001233222 123567789999999999
Q ss_pred cchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcc----------------------hhh
Q 016902 202 AGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEH----------------------GWG 259 (380)
Q Consensus 202 g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~~~----------------------gw~ 259 (380)
+...+...+++.|.+++++ |+.++++++.+..+|+++|+++++++.+.+ +|+
T Consensus 187 ~~~~~~~~~~i~d~~~~~~------~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWw 260 (633)
T TIGR00805 187 TPIFPLGISYIDDFAKSKN------SPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWW 260 (633)
T ss_pred CcchhcCchhhhccCCccc------cHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHH
Confidence 9999999999999999888 999999999999999999999999876532 277
Q ss_pred HHHHHHHHHHHHHHHHHHhh
Q 016902 260 SAFGALAIAMGISNMLFFIG 279 (380)
Q Consensus 260 ~~f~i~~~~~~~~~i~~~~~ 279 (380)
.+|++.+++.++..+.++..
T Consensus 261 l~Fli~g~l~~l~~v~l~~~ 280 (633)
T TIGR00805 261 IGFLICGGVALLTSIPFFFF 280 (633)
T ss_pred HHHHHHHHHHHHHHHHHHhC
Confidence 88888777666555444443
No 48
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.59 E-value=1.7e-13 Score=139.08 Aligned_cols=175 Identities=18% Similarity=0.133 Sum_probs=127.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHH-HH----H-HHHHHHHHHHHHHHHHHHHHHhhcchhHHHHH
Q 016902 68 WIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFAD-SS----N-AVNNFLGISQASSVLGGFLADAYLGRYWTIAI 141 (380)
Q Consensus 68 ~~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~-a~----~-~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i 141 (380)
++.++...+..+++.+.+. +......++.++++.+... .. . +.+...++..++.+++|+++||+ |||+++.+
T Consensus 15 ~~~~~~~~~g~~~~~~d~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-Grr~~l~~ 92 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFG-VYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKY-GRQKILAI 92 (490)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccHHHHHH
Confidence 4455556667777776665 4455667888888643311 11 1 24666788889999999999998 99999999
Q ss_pred HHHHHHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCc
Q 016902 142 FTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSK 221 (380)
Q Consensus 142 ~~~l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~ 221 (380)
+.+++.++.++++++.....+. -....+++++|++.|+|.|+..++..++++|.+|++.
T Consensus 93 ~~~l~~i~~~~~a~~~~~~~~g--------------------~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~- 151 (490)
T PRK10642 93 TIVIMSISTFCIGLIPSYATIG--------------------IWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRK- 151 (490)
T ss_pred HHHHHHHHHHHHHhcccHHHHH--------------------HHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCC-
Confidence 9999999998888752100000 0011247889999999999999999999999999887
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhh--------hcchhhHHHHHHHHHHH
Q 016902 222 DYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQ--------MEHGWGSAFGALAIAMG 270 (380)
Q Consensus 222 ~~~~~r~~~~~~~~~~~~iG~~i~~~i~~~i~--------~~~gw~~~f~i~~~~~~ 270 (380)
|+.+.+++..+..+|..+++.+...+. .++|||+.|++.++..+
T Consensus 152 -----Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l 203 (490)
T PRK10642 152 -----RGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGI 203 (490)
T ss_pred -----CcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHH
Confidence 899888888888888777766554432 25799999998665443
No 49
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.59 E-value=2.3e-13 Score=134.38 Aligned_cols=172 Identities=12% Similarity=0.054 Sum_probs=135.0
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHH
Q 016902 65 TGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTT 144 (380)
Q Consensus 65 ~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~ 144 (380)
-+-||++....+..++..++.+....+++.|+ +++|++..+.+.+.+.+.++..++.+++|+++||+ |||+++.++.+
T Consensus 9 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~-g~k~~l~~~~~ 86 (402)
T TIGR00897 9 IGIPLNLLWGYIGVVVFMTGDGLEQGWLSPFL-KALGLSPQQSASAFTLYGIAAAISAWISGVVAEII-GPLKTMMIGLL 86 (402)
T ss_pred cCCCchhhHHHHHHHHHHHhhhhHHHhHHHHH-HHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHH
Confidence 34556677777777777777766666777777 67899999999999999999999999999999998 99999999999
Q ss_pred HHHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhh
Q 016902 145 IYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYK 224 (380)
Q Consensus 145 l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~ 224 (380)
+..++.+++.+... +. .+...+++.+++.|+|.+...+...+...+.+++++
T Consensus 87 ~~~~~~~~~~~~~~----------~~--------------~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~---- 138 (402)
T TIGR00897 87 LWCVGHAAFIVFGL----------GH--------------ANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDN---- 138 (402)
T ss_pred HHHHHHHHHHHHhc----------cC--------------ccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHH----
Confidence 88888765432110 00 245667778888899888777777788889988776
Q ss_pred hhhhhHHHHHHHHHHHHH-HHHHHHHHHhhhcchhhHHHHHHHHH
Q 016902 225 THLDRFFNFFYLSVTVGA-IVAFTLVVYIQMEHGWGSAFGALAIA 268 (380)
Q Consensus 225 ~~r~~~~~~~~~~~~iG~-~i~~~i~~~i~~~~gw~~~f~i~~~~ 268 (380)
|++..++++.+.++|. .+++.+++++.+..||+..++....+
T Consensus 139 --~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~ 181 (402)
T TIGR00897 139 --LSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAF 181 (402)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHH
Confidence 9999999999999996 57899988988888876555544433
No 50
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.58 E-value=1.5e-13 Score=131.02 Aligned_cols=168 Identities=19% Similarity=0.245 Sum_probs=143.1
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHH
Q 016902 73 FIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTG 152 (380)
Q Consensus 73 ~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~ 152 (380)
.+....++..+..+.....++.|. +++|.+..+.+...+....+..++.++.|+++||+ |||+.+.++.++..++.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~-g~r~~~~~~~~~~~~~~~~ 80 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLA-EDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRF-GRRRVLLLGLLLFALGSLL 80 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CCchhhHHHHHHHHHHHHH
Confidence 344556666677766666666555 57799999999999999999999999999999998 9999999999999998888
Q ss_pred HHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHH
Q 016902 153 ITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFN 232 (380)
Q Consensus 153 l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~ 232 (380)
+.+. .+...+++++++.|++.+...+...++..|.+++++ |++.++
T Consensus 81 ~~~~----------------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 126 (352)
T cd06174 81 LAFA----------------------------SSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKE------RGRALG 126 (352)
T ss_pred HHHh----------------------------ccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccc------hhhhhh
Confidence 7764 246778889999999999999999999999999877 999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHH
Q 016902 233 FFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLF 276 (380)
Q Consensus 233 ~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~~ 276 (380)
+++....+|..+++.+.+++.+..+|++.|++.++..+++.++.
T Consensus 127 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (352)
T cd06174 127 LFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLL 170 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998899999988777666555443
No 51
>PRK10133 L-fucose transporter; Provisional
Probab=99.58 E-value=6.5e-13 Score=132.97 Aligned_cols=153 Identities=13% Similarity=-0.014 Sum_probs=118.8
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHH
Q 016902 67 GWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIY 146 (380)
Q Consensus 67 ~~~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~ 146 (380)
....+..+.+..+...+....... +.+.+++++|++..+.++..+.+.++..++.++.|+++||+ |||+++.++.+++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~-~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~-G~r~~l~~g~~~~ 101 (438)
T PRK10133 24 YIIPFALLCSLFFLWAVANNLNDI-LLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKL-SYKAGIITGLFLY 101 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHH
Confidence 344555555555555555544444 44556999999999999999999999999999999999998 9999999999999
Q ss_pred HHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhh
Q 016902 147 LAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTH 226 (380)
Q Consensus 147 ~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~ 226 (380)
.++.+++..... ..+...++++|++.|+|.|...++..++++|..+++.
T Consensus 102 ~~~~~l~~~~~~-------------------------a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~------ 150 (438)
T PRK10133 102 ALGAALFWPAAE-------------------------IMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESS------ 150 (438)
T ss_pred HHHHHHHHHHHh-------------------------cCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhh------
Confidence 999877643211 0357788999999999999999999999998755443
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHh
Q 016902 227 LDRFFNFFYLSVTVGAIVAFTLVVYI 252 (380)
Q Consensus 227 r~~~~~~~~~~~~iG~~i~~~i~~~i 252 (380)
+....+.+.....+|..+++.+++.+
T Consensus 151 ~~~~~s~~~~~~~~G~~~g~~~g~~l 176 (438)
T PRK10133 151 GHFRLNLAQTFNSFGAIIAVVFGQSL 176 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44456777777778888887776654
No 52
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.57 E-value=1e-13 Score=137.98 Aligned_cols=151 Identities=18% Similarity=0.266 Sum_probs=125.4
Q ss_pred HHHHHhcCCC--------HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCCC
Q 016902 94 TFMFYVMHKS--------FADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPN 165 (380)
Q Consensus 94 ~yl~~~~~~s--------~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~~ 165 (380)
..+..+++++ ..+.+++.+.+.++..++.+++|+++||+ |||++++++.++..++.+++.+...
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~-grr~~~~~~~~~~~~~~~~~~~~~~------- 123 (481)
T TIGR00879 52 ALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRF-GRKKSLLIIALLFVIGAILMGLAAF------- 123 (481)
T ss_pred hcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhh-hhHHHHHHHHHHHHHHHHHHHHhcc-------
Confidence 3445555555 78999999999999999999999999998 9999999999999988888765321
Q ss_pred CCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHH
Q 016902 166 QDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVA 245 (380)
Q Consensus 166 ~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~ 245 (380)
..+...+++++++.|+|.+...+...++++|.+++++ |+..+++++.+.++|..++
T Consensus 124 ------------------~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~~~~~~~G~~~~ 179 (481)
T TIGR00879 124 ------------------ALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKAL------RGALTSLYQLAITFGILVA 179 (481)
T ss_pred ------------------ccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhh------hhhhhhHHHHHHHHHHHHH
Confidence 0234578899999999999999999999999999887 9999999999999999999
Q ss_pred HHHH---HHhhhcchhhHHHHHHHHHHHHHHHHH
Q 016902 246 FTLV---VYIQMEHGWGSAFGALAIAMGISNMLF 276 (380)
Q Consensus 246 ~~i~---~~i~~~~gw~~~f~i~~~~~~~~~i~~ 276 (380)
+.+. ..+.+..+|++.|++.++..++.++..
T Consensus 180 ~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~ 213 (481)
T TIGR00879 180 YGFGSGKVSLNNTLGWRIPLGLQLIPAGLLFLGL 213 (481)
T ss_pred HHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHHH
Confidence 9988 666677899999998665555444433
No 53
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.57 E-value=3.5e-13 Score=136.70 Aligned_cols=179 Identities=13% Similarity=0.051 Sum_probs=128.3
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHH
Q 016902 67 GWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIY 146 (380)
Q Consensus 67 ~~~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~ 146 (380)
.|+.....+...++..+.+|++..+++.|+++.+|++...+........++..++.+++|+++|++ |||++++++.++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-grr~~~~~~~~~~ 326 (490)
T PRK10642 248 HWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRF-GRRPFVILGSVAL 326 (490)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHH
Confidence 455555444555666788888999999999999999988887777778888889999999999998 9999988887655
Q ss_pred HHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhh
Q 016902 147 LAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTH 226 (380)
Q Consensus 147 ~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~ 226 (380)
.++.+++..... . .+...+++++++.+++.++..+....+..+.+|++.
T Consensus 327 ~~~~~~~~~~~~-----~--------------------~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~------ 375 (490)
T PRK10642 327 FVLAIPAFILIN-----S--------------------NVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHI------ 375 (490)
T ss_pred HHHHHHHHHHHh-----C--------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcc------
Confidence 444333222110 0 234556677777777777667777888889999888
Q ss_pred hhhHHHH-HHHHHHHHHHHHHHHHHHhhhcch-hhHHHHHHHHHHHHHHHHHHh
Q 016902 227 LDRFFNF-FYLSVTVGAIVAFTLVVYIQMEHG-WGSAFGALAIAMGISNMLFFI 278 (380)
Q Consensus 227 r~~~~~~-~~~~~~iG~~i~~~i~~~i~~~~g-w~~~f~i~~~~~~~~~i~~~~ 278 (380)
|++++++ +++ ..+++.++|.+.+++.+..+ |+..+++..+..+++++..++
T Consensus 376 Rg~~~g~~~~~-~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~ 428 (490)
T PRK10642 376 RYSALAAAFNI-SVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVT 428 (490)
T ss_pred chHHHHHHHHH-HHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHH
Confidence 9999998 555 55667788999999877554 666665544444444444433
No 54
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.57 E-value=3.1e-13 Score=131.24 Aligned_cols=168 Identities=11% Similarity=0.051 Sum_probs=127.8
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHH-HHHHHHHHHHHHH
Q 016902 76 GNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAI-FTTIYLAGLTGIT 154 (380)
Q Consensus 76 ~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i-~~~l~~lg~~~l~ 154 (380)
+..++..++.......++.|+++++|.+..+.+.+.+.+.+...+..++.|.++||+ ||||.+++ +.++..++.+++.
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~~~~~~~~~~ 82 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQ-GDRKGLILFCCLLAALACLLFA 82 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchHHHHHHHHHHHHHHHHHH
Confidence 445666677777778888999999999999999999999998999999999999998 99887665 4444455555544
Q ss_pred hhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhh--HHH
Q 016902 155 LCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR--FFN 232 (380)
Q Consensus 155 l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~--~~~ 232 (380)
.+ .+...+++.+++.+.+.+...+...++..|..+++. |.. ..+
T Consensus 83 ~~----------------------------~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~------~~~~~~~~ 128 (375)
T TIGR00899 83 WN----------------------------RNYFLLLVLGVLLSSFASTANPQLFALAREHADRTG------REAVMFSS 128 (375)
T ss_pred hc----------------------------chHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcc------hhhHHHHH
Confidence 43 245566777777777767777777778888776444 443 356
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHHh
Q 016902 233 FFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (380)
Q Consensus 233 ~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~~~~ 278 (380)
+.....++|..+++.+++++.+..||++.|++.+++.++..++.+.
T Consensus 129 ~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~ 174 (375)
T TIGR00899 129 VMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWL 174 (375)
T ss_pred HHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 7777888999999999999988899999999887776655554443
No 55
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.56 E-value=2.1e-13 Score=137.35 Aligned_cols=152 Identities=16% Similarity=0.202 Sum_probs=121.5
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhc-ccCCCCCCcccccccccCCC
Q 016902 101 HKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATM-KVFMPNQDNCDRISQLLGSC 179 (380)
Q Consensus 101 ~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~-~~l~~~~~~c~~~~~~~~~c 179 (380)
+.+..+.+++.+.+.++..++.+++|+++||+ |||++++++.+++.++.++.++.... .....
T Consensus 51 ~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~-Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~--------------- 114 (479)
T PRK10077 51 SAANSLLGFCVASALIGCIIGGALGGYCSNRF-GRRDSLKIAAVLFFISALGSAWPEFGFTSIGP--------------- 114 (479)
T ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHhhccccccccc---------------
Confidence 88889999999999999999999999999998 99999999999998887776653110 00000
Q ss_pred CCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhh------
Q 016902 180 EPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQ------ 253 (380)
Q Consensus 180 ~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~~~i~------ 253 (380)
++......++++|++.|++.|+..+...++++|.+|+++ |+.+++++..+..+|..+++.+..++.
T Consensus 115 --~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~------rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~ 186 (479)
T PRK10077 115 --DNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHI------RGKLVSFNQFAIIFGQLVVYFVNYFIARSGDAS 186 (479)
T ss_pred --cchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhh------hhHHHHHHHHHHHHHHHHHHHHHHHHhccCccc
Confidence 011335678899999999999999999999999999877 999999999999999998877665443
Q ss_pred --hcchhhHHHHHHHHHHHHHHHHH
Q 016902 254 --MEHGWGSAFGALAIAMGISNMLF 276 (380)
Q Consensus 254 --~~~gw~~~f~i~~~~~~~~~i~~ 276 (380)
+..|||+.|++.++..++.++..
T Consensus 187 ~~~~~gWr~~f~~~~~~~~~~~~~~ 211 (479)
T PRK10077 187 WLNTDGWRYMFASEAIPALLFLMLL 211 (479)
T ss_pred ccccCChHHHHHHHHHHHHHHHHHH
Confidence 34689999998776665554433
No 56
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.56 E-value=8.2e-13 Score=131.10 Aligned_cols=173 Identities=11% Similarity=0.033 Sum_probs=136.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHH
Q 016902 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (380)
Q Consensus 71 ~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~ 150 (380)
.+.+....++..+.. ++...+.+.+++++|++..+.+++.+.+.++..++.++.|+++||+ |||++++++.+++.+|.
T Consensus 5 ~~~~~~~f~~~G~~~-~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~-G~r~~~~~g~~l~~~g~ 82 (410)
T TIGR00885 5 FALITSLFALWGFAN-DITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKL-SYKAGILLGLFLYALGA 82 (410)
T ss_pred HHHHHHHHHHHHHHH-HhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHH
Confidence 344444444444444 4555566778999999999999999999999999999999999998 99999999999999998
Q ss_pred HHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhH
Q 016902 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (380)
Q Consensus 151 ~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~ 230 (380)
+++..++.. .+...+++++++.|+|.|...+...++..+..|++. +++.
T Consensus 83 ~l~~~~~~~-------------------------~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~------~~~~ 131 (410)
T TIGR00885 83 FLFWPAAEI-------------------------MNYTLFLVGLFILTAGLGFLETAANPYILVMGPEST------ATRR 131 (410)
T ss_pred HHHHHHHhh-------------------------ccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhH------HHHH
Confidence 776543210 356778899999999999999999999999988766 7778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhh--------------------------cchhhHHHHHHHHHHHHHHHHH
Q 016902 231 FNFFYLSVTVGAIVAFTLVVYIQM--------------------------EHGWGSAFGALAIAMGISNMLF 276 (380)
Q Consensus 231 ~~~~~~~~~iG~~i~~~i~~~i~~--------------------------~~gw~~~f~i~~~~~~~~~i~~ 276 (380)
.++.+...++|..+++.+.+.+.. ..+|++.|.+.+++.++..+++
T Consensus 132 ~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~ 203 (410)
T TIGR00885 132 LNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLI 203 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888888999999888876632 2369999987776655444333
No 57
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.56 E-value=5.7e-13 Score=131.44 Aligned_cols=164 Identities=13% Similarity=0.061 Sum_probs=130.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHH
Q 016902 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (380)
Q Consensus 71 ~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~ 150 (380)
.+.++...++..++...+...++ .+..++|.+....+++.+.+.+...++.+++|+++||+ |||++++++.+++.++.
T Consensus 5 f~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~-grr~vl~~~~~~~~~~~ 82 (393)
T PRK11195 5 FYAIMAAQFFSALADNALLFAAI-ALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSF-PKGRVMFIANGIKLLGC 82 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhcc-CCchhhHHHHHHHHHHH
Confidence 34455566666665443433344 34678999999999999999999999999999999998 99999999999998887
Q ss_pred HHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhH
Q 016902 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (380)
Q Consensus 151 ~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~ 230 (380)
+++... .+ .++.+++.|++.++..|...+++.|.+|+++ |+++
T Consensus 83 ~~~~~~----------------------------~~---~~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~------~~~a 125 (393)
T PRK11195 83 LLMLFG----------------------------IH---PLLAYGLVGIGAAAYSPAKYGILTELLPGEK------LVKA 125 (393)
T ss_pred HHHHHH----------------------------HH---HHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH------HHHH
Confidence 765543 12 2667889999999999999999999999776 9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHH
Q 016902 231 FNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNM 274 (380)
Q Consensus 231 ~~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i 274 (380)
.+++.....+|..+||.+++++.+. .|+..+++.+++.+++++
T Consensus 126 ~~~~~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~~~~~~~~ 168 (393)
T PRK11195 126 NGWMEGSTIAAILLGTVLGGALADP-HAEAALAVCALIYLLAAL 168 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999774 477777666555444433
No 58
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.55 E-value=2.3e-13 Score=134.85 Aligned_cols=170 Identities=19% Similarity=0.155 Sum_probs=131.3
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhh
Q 016902 77 NEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLC 156 (380)
Q Consensus 77 ~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~ 156 (380)
..++..++.......++.+ .++++.+..+.+.+.+.+.++..++.++.|+++||+ |||+++.++.++..++.+.+.+.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~-g~~~~l~~~~~~~~~~~~~~~~~ 102 (417)
T PRK10489 25 ARFISIFGLGLLGVAVPVQ-IQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRY-DRKKLILLARGTCGLGFIGLALN 102 (417)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhc-CCceEEEehHHHHHHHHHHHHHH
Confidence 3444444443333444444 456788999999999999999999999999999998 99999998888777776665432
Q ss_pred hhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHH
Q 016902 157 ATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYL 236 (380)
Q Consensus 157 ~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~ 236 (380)
... .. .+...+++.+++.|++.+...++..++..|.+++++ |+++.++++.
T Consensus 103 ~~~----~~-------------------~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 153 (417)
T PRK10489 103 AFL----PE-------------------PSLLAIYLLGLWDGFFGSLGVTALLAATPALVGREN------LMQAGAITML 153 (417)
T ss_pred HHc----CC-------------------CcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHH------HHHHHHHHHH
Confidence 110 00 245667788888899888888888889999998766 8999999999
Q ss_pred HHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHH
Q 016902 237 SVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFF 277 (380)
Q Consensus 237 ~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~~~ 277 (380)
...+|..+|+.+++++.+..+|++.|++.++..+++.++.+
T Consensus 154 ~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (417)
T PRK10489 154 TVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLL 194 (417)
T ss_pred HHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998888999999887776665554443
No 59
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.55 E-value=3.8e-13 Score=135.28 Aligned_cols=151 Identities=14% Similarity=0.092 Sum_probs=122.6
Q ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCccccc
Q 016902 93 VTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRI 172 (380)
Q Consensus 93 ~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~~~~~c~~~ 172 (380)
...+.+++|++..+.+++.+.+..+..++.+++|+++||+ |||++++++.++..++.+++..+
T Consensus 42 ~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~---------------- 104 (455)
T TIGR00892 42 FKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRF-GCRPVVIAGGLLASLGMILASFS---------------- 104 (455)
T ss_pred HHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHc-CchHHHHhhHHHHHHHHHHHHHh----------------
Confidence 4456789999999999999999998899999999999997 99999999998888887776654
Q ss_pred ccccCCCCCCcchhHHHHHH-HHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 016902 173 SQLLGSCEPAKSWQMLYLYT-VLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVY 251 (380)
Q Consensus 173 ~~~~~~c~~~~~~~~~~l~~-~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~~~ 251 (380)
.+...+++ .+++.|++.+...+...++..+.++ ++ |+...++++.+..+|..+++.++++
T Consensus 105 ------------~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~------r~~a~g~~~~~~~~g~~~~~~l~~~ 165 (455)
T TIGR00892 105 ------------SNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RR------RPLANGLAMAGSPVFLSTLAPLNQY 165 (455)
T ss_pred ------------hhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hh------HHHHHHHHHhcccHHHHHHHHHHHH
Confidence 23444444 4577888888765666677788885 44 8999999999999999999999999
Q ss_pred hhhcchhhHHHHHHHHHHHHHHHHHHhh
Q 016902 252 IQMEHGWGSAFGALAIAMGISNMLFFIG 279 (380)
Q Consensus 252 i~~~~gw~~~f~i~~~~~~~~~i~~~~~ 279 (380)
+.+..||++.|++.+++.+++.+..++.
T Consensus 166 l~~~~gwr~~f~~~~~~~~~~~v~~~~~ 193 (455)
T TIGR00892 166 LFESFGWRGSFLILGGLLLHCCVCGALM 193 (455)
T ss_pred HHHHhChHHHHHHHHHHHHHHHHHHHHh
Confidence 9998999999998888776655544433
No 60
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.55 E-value=7.4e-14 Score=134.94 Aligned_cols=152 Identities=13% Similarity=0.053 Sum_probs=130.9
Q ss_pred hHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCccc
Q 016902 91 NMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCD 170 (380)
Q Consensus 91 ~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~~~~~c~ 170 (380)
...+++.+++|++..+.+++.+.+.++..++.+++|+++||+ |||++++++.++..++.+++.++
T Consensus 16 ~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~-------------- 80 (379)
T TIGR00881 16 LAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRS-NPRVFLPIGLILCAIVNLFFGFS-------------- 80 (379)
T ss_pred hhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhh-CCeehhHHHHHHHHHHHHHHHHh--------------
Confidence 345678889999999999999999999999999999999998 99999999999998888887764
Q ss_pred ccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHH-HHH
Q 016902 171 RISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAF-TLV 249 (380)
Q Consensus 171 ~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~-~i~ 249 (380)
.+...+++++++.|++.+...+...++.+|.+++++ |+..+++++.+..+|..+++ .+.
T Consensus 81 --------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~ 140 (379)
T TIGR00881 81 --------------TSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSE------RGTWVSFWNCSHNVGGGLLPPLVL 140 (379)
T ss_pred --------------hhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhh------heeeEeehhccchhHHHHHHHHHH
Confidence 356778889999999999999999999999999876 89999999999999999998 566
Q ss_pred HHhhhcchhhHHHHHHHHHHHHHHHHHH
Q 016902 250 VYIQMEHGWGSAFGALAIAMGISNMLFF 277 (380)
Q Consensus 250 ~~i~~~~gw~~~f~i~~~~~~~~~i~~~ 277 (380)
..+.+..+|++.|++.+++.++..++.+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (379)
T TIGR00881 141 FGIAELYSWHWVFIVPGIIAIIVSLICF 168 (379)
T ss_pred HHHHhcCCchhHHHHHHHHHHHHHHHHh
Confidence 6777778999999887776655444433
No 61
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.54 E-value=7.4e-13 Score=129.78 Aligned_cols=152 Identities=16% Similarity=0.188 Sum_probs=130.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHH
Q 016902 69 IAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLA 148 (380)
Q Consensus 69 ~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~l 148 (380)
+.++.+++..++..+....+...++.|+. ++|.+..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++..+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~-~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~-g~k~~~~~~~~~~~~ 83 (381)
T PRK03633 6 RPVLLLLCGLLLLTLAIAVLNTLVPLWLA-QEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRI-GFNRSYYLASLIFAA 83 (381)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 45777788888888887767777777665 7899999999999999999999999999999998 999999999999988
Q ss_pred HHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhh
Q 016902 149 GLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLD 228 (380)
Q Consensus 149 g~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~ 228 (380)
+.+++.++ .+...+++++++.|++.++..+...+...+..++++ |+
T Consensus 84 ~~~~~~~~----------------------------~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~~ 129 (381)
T PRK03633 84 GCAGLGLM----------------------------VGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRN------RG 129 (381)
T ss_pred HHHHHHHh----------------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HH
Confidence 88776664 356778889999999999888887777788887655 89
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 016902 229 RFFNFFYLSVTVGAIVAFTLVVYIQMEH 256 (380)
Q Consensus 229 ~~~~~~~~~~~iG~~i~~~i~~~i~~~~ 256 (380)
+.++++....++|..+++.+++++.+..
T Consensus 130 ~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 157 (381)
T PRK03633 130 RLLAAYMMVYYLGTVLGQLLVSKVSTEL 157 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 9999999999999999999999887653
No 62
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.54 E-value=1.9e-12 Score=129.20 Aligned_cols=195 Identities=8% Similarity=-0.055 Sum_probs=135.9
Q ss_pred cccC-CCCCCCcccCCCh---HHHHHHHHHHHHHHHHHHHHHHhHHHHHHH-hcCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 016902 52 VNVH-GKPIADLSKTGGW---IAALFIFGNEMAERMAYFGLSVNMVTFMFY-VMHKSFADSSNAVNNFLGISQASSVLGG 126 (380)
Q Consensus 52 ~~~~-~~p~~~~~~~~~~---~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~-~~~~s~~~a~~~~~~~~~~~~~~~l~~g 126 (380)
.||+ +||. -|.++++. |++++..+..++. +....+.+.+..++.+ ++|++..+.+++.+++.+++.++.++.|
T Consensus 14 ~~w~pe~~~-~w~~~~~~~a~r~l~~s~~~f~~~-F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G 91 (462)
T PRK15034 14 RDWKPENPA-FWENKGKHIARRNLWISVSCLLLA-FCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYS 91 (462)
T ss_pred cCCCCCChH-HHhhcCchHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4554 4455 66666554 6655555544443 4434444555666655 7999999999999999999999989999
Q ss_pred HHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhh
Q 016902 127 FLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRP 206 (380)
Q Consensus 127 ~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~ 206 (380)
++.||+ |.|+++.++.++..+.++++.++... . ..++..+++.+++.|++ |+..+
T Consensus 92 ~l~Dr~-G~R~v~~~~~ll~~i~~~~~~~a~~~--~---------------------~~s~~~lli~r~l~Gig-g~~f~ 146 (462)
T PRK15034 92 FMVPIF-GGRRWTVFSTAILIIPCVWLGIAVQN--P---------------------NTPFGIFIVIALLCGFA-GANFA 146 (462)
T ss_pred HHHHHh-CChHHHHHHHHHHHHHHHHHHHHHcc--c---------------------CCCHHHHHHHHHHHHHH-HHhHH
Confidence 999998 99999999999988888777653100 0 02577889999999998 66778
Q ss_pred hhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHHHH-----hhh-------------cchhhHHHHHHHHH
Q 016902 207 CVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVY-----IQM-------------EHGWGSAFGALAIA 268 (380)
Q Consensus 207 ~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~~~-----i~~-------------~~gw~~~f~i~~~~ 268 (380)
.....++..||+++ |+.+++++....++|..+++.+... +.. ..+|+..+++..++
T Consensus 147 ~~~~~vs~wfp~~~------rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~ 220 (462)
T PRK15034 147 SSMGNISFFFPKAK------QGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPL 220 (462)
T ss_pred HHHHHHHHHCCHhH------hHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHH
Confidence 88899999999877 9999999866666666554444332 212 23466666665555
Q ss_pred HHHHHHHHHhh
Q 016902 269 MGISNMLFFIG 279 (380)
Q Consensus 269 ~~~~~i~~~~~ 279 (380)
.++..++.++.
T Consensus 221 ~iv~~i~~~~~ 231 (462)
T PRK15034 221 LAIATIAAWSG 231 (462)
T ss_pred HHHHHHHHHHh
Confidence 55555444443
No 63
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.53 E-value=9.9e-13 Score=132.57 Aligned_cols=176 Identities=16% Similarity=0.070 Sum_probs=132.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHH
Q 016902 69 IAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLA 148 (380)
Q Consensus 69 ~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~l 148 (380)
+.+|.+.+..++....++++..+++.|+++.+|++..+++.....+.++..++.+++|+++||+ |||+.+.+...+..+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-g~r~~~~~~~~~~~~ 336 (467)
T PRK09556 258 PVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLA-NGRRALVACIALALI 336 (467)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCchHHHHHHHHHH
Confidence 3466777777777777888888999999999999999999999989999999999999999998 998877665444443
Q ss_pred HHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhh
Q 016902 149 GLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLD 228 (380)
Q Consensus 149 g~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~ 228 (380)
+..++.+.. . .+...+++.+++.|++..+..........|.+|++. ++
T Consensus 337 ~~~~~~~~~------~--------------------~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~------~g 384 (467)
T PRK09556 337 IFTLGVYQH------A--------------------TSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKA------IG 384 (467)
T ss_pred HHHHHHHHh------c--------------------CcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhh------HH
Confidence 332222210 0 123344556666665544444444466779999877 99
Q ss_pred hHHHHHHHHHHH-HHHHHHHHHHHhhh------------cchhhHHHHHHHHHHHHHHHHHH
Q 016902 229 RFFNFFYLSVTV-GAIVAFTLVVYIQM------------EHGWGSAFGALAIAMGISNMLFF 277 (380)
Q Consensus 229 ~~~~~~~~~~~i-G~~i~~~i~~~i~~------------~~gw~~~f~i~~~~~~~~~i~~~ 277 (380)
++.++.+...++ |+.++|.+.|++.+ ..||+..|++..++.++++++.+
T Consensus 385 ~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 446 (467)
T PRK09556 385 VANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMA 446 (467)
T ss_pred HHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHH
Confidence 999999888886 77999999999998 56899999888777777665544
No 64
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.52 E-value=7.4e-14 Score=140.74 Aligned_cols=154 Identities=16% Similarity=0.081 Sum_probs=125.1
Q ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCcccc
Q 016902 92 MVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDR 171 (380)
Q Consensus 92 l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~~~~~c~~ 171 (380)
....+.+++|++..+.+++.+.+..++.++.+++|+++||+ |||+++.++.++..++.+++.... |.
T Consensus 51 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~~~~~~~~~~~-----------~~- 117 (467)
T PRK09556 51 AQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGK-NTKQFLPFLLILSAICMLGFGASL-----------GS- 117 (467)
T ss_pred hhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhcc-CccchHHHHHHHHHHHHHHHHHHH-----------hc-
Confidence 35567889999999999999999999999999999999998 999999888877776666555421 00
Q ss_pred cccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 016902 172 ISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVY 251 (380)
Q Consensus 172 ~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~~~ 251 (380)
...+...+++.|++.|++.+...++...+++|.+|+++ |+.+++++..+.++|+.+++.+..+
T Consensus 118 -----------~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------rg~a~gi~~~~~~lG~~l~~~i~~~ 180 (467)
T PRK09556 118 -----------GSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRK------RGRFLGFWNISHNLGGAGAGGVALW 180 (467)
T ss_pred -----------ccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccc------eeeeEEeeecccchhhhHHHHHHHH
Confidence 00357788899999999999888999999999999888 9999999999999999999888877
Q ss_pred hhhcc---hhhHHHHHHHHHHHHHHHH
Q 016902 252 IQMEH---GWGSAFGALAIAMGISNML 275 (380)
Q Consensus 252 i~~~~---gw~~~f~i~~~~~~~~~i~ 275 (380)
+.... +|+..|.+.+++.++..++
T Consensus 181 ~~~~~~~~~~~~~f~~~g~~~~~~~i~ 207 (467)
T PRK09556 181 GANYFFDGHVIGMFIFPSIIALIIGFI 207 (467)
T ss_pred HHHhhccCcchhHHHHHHHHHHHHHHH
Confidence 76543 5888887766655544333
No 65
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.52 E-value=7.8e-13 Score=132.77 Aligned_cols=153 Identities=10% Similarity=0.063 Sum_probs=121.1
Q ss_pred hHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCccc
Q 016902 91 NMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCD 170 (380)
Q Consensus 91 ~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~~~~~c~ 170 (380)
...+|+.++ |++..+.+++.+.+.++..++.+++|+++||+ |||++++++.++..++.+++.+... .
T Consensus 50 ~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~-g~k~~l~~~~~~~~i~~~~~~~~~~-----------~ 116 (452)
T PRK11273 50 LAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILAAAVMLFMGFVPW-----------A 116 (452)
T ss_pred HhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhcc-CCchhHHHHHHHHHHHHHHHHhhhc-----------c
Confidence 345677777 99999999999999999999999999999998 9999999999988888877765310 0
Q ss_pred ccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHH-HHHHHH
Q 016902 171 RISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAI-VAFTLV 249 (380)
Q Consensus 171 ~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~-i~~~i~ 249 (380)
..+...+++.+++.|++.|...+.......|.+++++ |+.++++++.+.++|+. +++++.
T Consensus 117 -------------~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~~~~l~~ 177 (452)
T PRK11273 117 -------------TSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKE------RGGIVSVWNCAHNVGGGLPPLLFL 177 (452)
T ss_pred -------------cccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHH------HHHHHHHHHHHHHhhhhHHHHHHH
Confidence 0245667888889999988888888888999999777 99999999999998864 455544
Q ss_pred HHhhhcchhhHHHHHHHHHHHHHHHH
Q 016902 250 VYIQMEHGWGSAFGALAIAMGISNML 275 (380)
Q Consensus 250 ~~i~~~~gw~~~f~i~~~~~~~~~i~ 275 (380)
..+....||++.|++.+++.++..++
T Consensus 178 ~~~~~~~gw~~~f~i~~~~~~~~~~l 203 (452)
T PRK11273 178 LGMAWFNDWHAALYMPAFAAILVALF 203 (452)
T ss_pred HHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 33333458999999877765554433
No 66
>PRK09952 shikimate transporter; Provisional
Probab=99.52 E-value=1.9e-12 Score=129.53 Aligned_cols=178 Identities=16% Similarity=0.160 Sum_probs=125.3
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhc--CCCHHHHHHHH-----HHHHHHHHHHHHHHHHHHHhhcchhHH
Q 016902 66 GGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVM--HKSFADSSNAV-----NNFLGISQASSVLGGFLADAYLGRYWT 138 (380)
Q Consensus 66 ~~~~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~--~~s~~~a~~~~-----~~~~~~~~~~~l~~g~lsD~~~GR~~~ 138 (380)
.+|+..+...+..+++.+....+....+.++.+++ +.+... +.+. .+..++..++.++.|+++||+ |||++
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~-Grr~~ 96 (438)
T PRK09952 19 RARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPAM-GTLAAFATFGVGFLFRPLGGVVFGHFGDRL-GRKRM 96 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHH-HHHHHHHHHHHHHHHHhhHHHHHHHHHHhh-ccHHH
Confidence 34555666666667776666544433444555555 666653 3322 233344567788899999998 99999
Q ss_pred HHHHHHHHHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCC
Q 016902 139 IAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDE 218 (380)
Q Consensus 139 i~i~~~l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~ 218 (380)
++++.+++.++.++++++...... .-.....+++.|++.|++.|+..+....+..|.+|+
T Consensus 97 l~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~ 156 (438)
T PRK09952 97 LMLTVWMMGIATALIGLLPSFSTI--------------------GWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPK 156 (438)
T ss_pred HHHHHHHHHHHHHHHhcCCcHHHH--------------------HHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCC
Confidence 999999999998887775110000 000123578889999999999999999999999998
Q ss_pred CCchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhh--------hcchhhHHHHHHHHHHHH
Q 016902 219 RSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQ--------MEHGWGSAFGALAIAMGI 271 (380)
Q Consensus 219 ~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~~~i~--------~~~gw~~~f~i~~~~~~~ 271 (380)
++ |+...+..+.+..+|..++..+..++. ...|||+.|++.++..++
T Consensus 157 ~~------rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~ 211 (438)
T PRK09952 157 NK------KAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLI 211 (438)
T ss_pred CC------CcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHH
Confidence 77 888888888888888888877666554 247999999887665443
No 67
>PRK15075 citrate-proton symporter; Provisional
Probab=99.52 E-value=1.6e-12 Score=129.89 Aligned_cols=175 Identities=15% Similarity=0.077 Sum_probs=124.2
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHH-HHHHHHHHH-----HHHHHHHHHHHHHhhcchhHH
Q 016902 65 TGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSS-NAVNNFLGI-----SQASSVLGGFLADAYLGRYWT 138 (380)
Q Consensus 65 ~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~-~~~~~~~~~-----~~~~~l~~g~lsD~~~GR~~~ 138 (380)
..||+.....++..+++.+....+. .+.+++.++++.+..+.+ ...+....+ ..++.++.|+++||+ |||+.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-Grr~~ 88 (434)
T PRK15075 11 ESKARAILRVTSGNFLEMFDFFLFG-FYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRV-GRRKG 88 (434)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhh-chHHH
Confidence 3455666666666666666665443 455678889998776543 333322222 235778999999998 99999
Q ss_pred HHHHHHHHHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCC
Q 016902 139 IAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDE 218 (380)
Q Consensus 139 i~i~~~l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~ 218 (380)
++++.+++.++.++++++.....+. ......++++|++.|++.|+..++...+.+|.+|+
T Consensus 89 l~~~~~~~~~~~~l~~~~~~~~~~~--------------------~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~ 148 (434)
T PRK15075 89 LIVTLSIMASGTLLIAFVPGYATIG--------------------LAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATP 148 (434)
T ss_pred HHHHHHHHHHHHHHHHhCCcHHHHH--------------------HHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCc
Confidence 9999999999988887751100000 00012468889999999999999899999999998
Q ss_pred CCchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHh--------hhcchhhHHHHHHHH
Q 016902 219 RSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYI--------QMEHGWGSAFGALAI 267 (380)
Q Consensus 219 ~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~~~i--------~~~~gw~~~f~i~~~ 267 (380)
++ |+...+++....++|..+++.+++.+ .+..|||+.|++.++
T Consensus 149 ~~------rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~ 199 (434)
T PRK15075 149 GR------KGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCL 199 (434)
T ss_pred cc------chHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHH
Confidence 87 99999998887777777777666654 246799999987543
No 68
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.51 E-value=2.1e-12 Score=131.36 Aligned_cols=179 Identities=15% Similarity=0.124 Sum_probs=130.6
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHH
Q 016902 67 GWIAALFIFGNEMAERMAYFGLSVNMVTFMFYV-----MHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAI 141 (380)
Q Consensus 67 ~~~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~-----~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i 141 (380)
+++.+.++.+..+...+....+.. ....+..+ .+.+..+.+++.+.+.++..++.+++|+++||+ |||+++.+
T Consensus 14 ~~~~~~~~~~~~~~~g~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~-Grr~~~~~ 91 (502)
T TIGR00887 14 HFRAIVIAGVGFFTDSYDLFCISL-VTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKL-GRKRVYGM 91 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccHHHHHH
Confidence 344444455555555444433332 22333332 234556678899999999999999999999998 99999999
Q ss_pred HHHHHHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCc
Q 016902 142 FTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSK 221 (380)
Q Consensus 142 ~~~l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~ 221 (380)
+.+++.++.++++++.. ..+ ..+...++++|++.|++.|+..+..+.+.+|.+|.+.
T Consensus 92 ~~~~~~v~~~~~~~~~~---~~~-------------------~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~- 148 (502)
T TIGR00887 92 ELIIMIIATVASGLSPG---SSP-------------------KSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKW- 148 (502)
T ss_pred HHHHHHHHHHHHHHccC---ccc-------------------chHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhh-
Confidence 99999998887766411 000 0235678999999999999999999999999999888
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhh-----------------------cchhhHHHHHHHHHHHHHHHH
Q 016902 222 DYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQM-----------------------EHGWGSAFGALAIAMGISNML 275 (380)
Q Consensus 222 ~~~~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~-----------------------~~gw~~~f~i~~~~~~~~~i~ 275 (380)
|+.+.++++....+|..+++.+..++.. ..+||+.|.+.++..++.++.
T Consensus 149 -----Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~ 220 (502)
T TIGR00887 149 -----RGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYF 220 (502)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998888877665421 237999998776655544443
No 69
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.51 E-value=5.3e-13 Score=128.57 Aligned_cols=178 Identities=22% Similarity=0.247 Sum_probs=143.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-chhHHHHH-HHHHH
Q 016902 69 IAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYL-GRYWTIAI-FTTIY 146 (380)
Q Consensus 69 ~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~-GR~~~i~i-~~~l~ 146 (380)
|.+|++.+..++..+.-|++..+.+.|+.+..|++..++.+..+.|-.+...++++.||+||+++ |||....+ +.+..
T Consensus 252 k~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i 331 (448)
T COG2271 252 KLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLI 331 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHH
Confidence 34789999999999999999999999999999999999999999999999999999999999998 88765543 33334
Q ss_pred HHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhh
Q 016902 147 LAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTH 226 (380)
Q Consensus 147 ~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~ 226 (380)
++..+...++ |+ .+..+..+.++++|+...|....+.....|..|.+.
T Consensus 332 ~~~~~~~w~~-------~~-------------------~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~A------ 379 (448)
T COG2271 332 TASLVLYWLA-------PN-------------------GSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKA------ 379 (448)
T ss_pred HHHHHHHHcC-------CC-------------------ccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhh------
Confidence 4444444332 21 356777778888999999998888888888888666
Q ss_pred hhhHHHHHHHHHHH-HHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHHh
Q 016902 227 LDRFFNFFYLSVTV-GAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (380)
Q Consensus 227 r~~~~~~~~~~~~i-G~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~~~~ 278 (380)
-|++.+...+...+ |+.++....+++.|.+||..+|.+..++.+++.++++.
T Consensus 380 aGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~ 432 (448)
T COG2271 380 AGTATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLP 432 (448)
T ss_pred ccchhchhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHH
Confidence 78888887666666 88888888899988899999998877777766665544
No 70
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.51 E-value=3.9e-12 Score=125.30 Aligned_cols=165 Identities=10% Similarity=0.070 Sum_probs=121.5
Q ss_pred HHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhh
Q 016902 79 MAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCAT 158 (380)
Q Consensus 79 ~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~ 158 (380)
++....++.+..+++.|+++++|++..+++.+.+...++..++.+++|+++||+ |||+.+..+.+...+....+...
T Consensus 226 ~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~-- 302 (393)
T PRK15011 226 TLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRL-GKRFLMRVAAVAGVCFYAGMLMA-- 302 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHHHHHH--
Confidence 333344444556788899999999999888888777777788899999999998 99998877665554443332221
Q ss_pred cccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHH
Q 016902 159 MKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSV 238 (380)
Q Consensus 159 ~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~ 238 (380)
.+...+++.+++.+++.|...+....+..|.+|+ . ++++.++++...
T Consensus 303 --------------------------~~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~-~------~g~~~~~~~~~~ 349 (393)
T PRK15011 303 --------------------------HSPAILLGLQLLNAIYIGILGGIGMLYFQDLMPG-Q------AGSATTLYTNTS 349 (393)
T ss_pred --------------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-C------cchHHHHHHHHH
Confidence 1233445556666666665556666777888873 3 788888888888
Q ss_pred HHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHHhh
Q 016902 239 TVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIG 279 (380)
Q Consensus 239 ~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~~~~~ 279 (380)
++|..+++.+++++.+..||+..|++.+++.++++++.+..
T Consensus 350 ~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 390 (393)
T PRK15011 350 RVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRI 390 (393)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999998899999988777777766655443
No 71
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.50 E-value=6.5e-13 Score=133.63 Aligned_cols=146 Identities=15% Similarity=0.156 Sum_probs=125.6
Q ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCcccccccccCC
Q 016902 99 VMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGS 178 (380)
Q Consensus 99 ~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~ 178 (380)
+++++..+.+.+.+.+..++.++.+++|+++||+ |||+++.++.++..++.+++..+..
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~~-------------------- 128 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKY-VFKWSIGIGMFLSSVISIVIPWAAG-------------------- 128 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHh-CcchhhHHHHHHHHHHHHHHHHHHH--------------------
Confidence 6889999999999999999999999999999998 9999999999888887766544311
Q ss_pred CCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcc-h
Q 016902 179 CEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEH-G 257 (380)
Q Consensus 179 c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~~~-g 257 (380)
.+...+++.+++.|++.++..+....+.+|.+|+++ |+++.++++.+..+|..+++.+.+++.+.. |
T Consensus 129 ------~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~g 196 (465)
T TIGR00894 129 ------GGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKE------RSRLLGMSTSGFQLGTFIFLPISGWLCESWGG 196 (465)
T ss_pred ------cCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 234568889999999999999999999999999877 999999999999999999999999998884 9
Q ss_pred hhHHHHHHHHHHHHHHHHHH
Q 016902 258 WGSAFGALAIAMGISNMLFF 277 (380)
Q Consensus 258 w~~~f~i~~~~~~~~~i~~~ 277 (380)
|++.|++.++..++..++++
T Consensus 197 w~~~f~i~~~~~~~~~~~~~ 216 (465)
T TIGR00894 197 WPMIFYVFGIVGCAWSLLWF 216 (465)
T ss_pred CCeehhhhhHHHHHHHHHHH
Confidence 99999988776655544433
No 72
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.49 E-value=6.5e-12 Score=123.71 Aligned_cols=173 Identities=13% Similarity=0.137 Sum_probs=119.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhhcchhHHHHH-HHHHHHH
Q 016902 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNF-LGISQASSVLGGFLADAYLGRYWTIAI-FTTIYLA 148 (380)
Q Consensus 71 ~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~-~~~~~~~~l~~g~lsD~~~GR~~~i~i-~~~l~~l 148 (380)
.+..+...++..++...+...++.|+.+++|++..+.+++.+.. ..+..++++++++ +||+ ||||.+++ +.++..+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~-g~r~~~~~~~~~~~~~ 94 (393)
T PRK15011 17 STAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKR-GDRKSLIVFCCLLGVL 94 (393)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-Hhcc-cchhHHHHHHHHHHHH
Confidence 45555567777788777788899999999999999999987765 4466666666666 9998 99887654 4444445
Q ss_pred HHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHH-HHHHHHHhccchhhhhhhHhhccCCCCCchhhhhh
Q 016902 149 GLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYT-VLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHL 227 (380)
Q Consensus 149 g~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~-~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r 227 (380)
+..++.++ .+...+++ ++++.+++ +...+....+..|..+++. | ..
T Consensus 95 ~~~~~~~~----------------------------~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~-~~ 141 (393)
T PRK15011 95 ACTLFAWN----------------------------RNYFVLLFVGVFLSSFG-STANPQMFALAREHADKTG---R-EA 141 (393)
T ss_pred HHHHHHHh----------------------------hHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHhhhcc---c-hH
Confidence 55444443 23444433 34444444 4556667777777665443 0 12
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHHh
Q 016902 228 DRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (380)
Q Consensus 228 ~~~~~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~~~~ 278 (380)
+.+.++.+.+.++|..++|.+++++.++.||++.|++.++..++..+..+.
T Consensus 142 ~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 192 (393)
T PRK15011 142 VMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWL 192 (393)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHh
Confidence 344567888999999999999999998899999998877766555444443
No 73
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.49 E-value=1.2e-12 Score=130.92 Aligned_cols=155 Identities=12% Similarity=0.070 Sum_probs=124.6
Q ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCcccc
Q 016902 92 MVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDR 171 (380)
Q Consensus 92 l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~~~~~c~~ 171 (380)
...++++ +|++..+.+++.+.+.++..++.+++|+++||+ |||+.+.++.++..++.+++.+... .
T Consensus 49 ~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~~---~--------- 114 (438)
T TIGR00712 49 AMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILSAAVMLLMGFVPW---A--------- 114 (438)
T ss_pred hhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhcc-CCceehHHHHHHHHHHHHHHhcccc---c---------
Confidence 3456665 599999999999999999999999999999998 9999999988888887776554310 0
Q ss_pred cccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 016902 172 ISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVY 251 (380)
Q Consensus 172 ~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~~~ 251 (380)
..+...+++.+++.|++.|...+.....+.|.+|+++ |+.++++++...++|+.+++.+.++
T Consensus 115 ------------~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~------rg~~~~~~~~~~~~g~~~~~~l~~~ 176 (438)
T TIGR00712 115 ------------TSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSE------RGTIVSIWNCAHNIGGGIPPLLVLL 176 (438)
T ss_pred ------------cchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCccc------chhHHHHHHHHHHhHhHHHHHHHHH
Confidence 0235566778889999998888888899999999887 9999999999999999998887765
Q ss_pred h-hhcchhhHHHHHHHHHHHHHHHHHHh
Q 016902 252 I-QMEHGWGSAFGALAIAMGISNMLFFI 278 (380)
Q Consensus 252 i-~~~~gw~~~f~i~~~~~~~~~i~~~~ 278 (380)
+ ....+|++.|++.+++.++..++.++
T Consensus 177 ~~~~~~~w~~~f~~~~~~~~i~~~~~~~ 204 (438)
T TIGR00712 177 GMAWFNDWHAALYFPAICAIIVALFAFA 204 (438)
T ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 4 44568999999877776665444333
No 74
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.48 E-value=1.6e-12 Score=129.11 Aligned_cols=181 Identities=7% Similarity=-0.140 Sum_probs=118.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHH
Q 016902 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (380)
Q Consensus 70 ~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg 149 (380)
..+...+..++..++++.+.+.++.|+++++|++..+.+.+.+.+.++..++++++|+++||+ |||++++++..+..++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~-g~r~~~~~~~~~~~~~ 89 (420)
T PRK09528 11 NYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKL-GLKKHLLWIISGLLVL 89 (420)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHH
Confidence 355566667777777777888999999999999999999999999999999999999999998 9999998876665554
Q ss_pred HHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhh
Q 016902 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (380)
Q Consensus 150 ~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~ 229 (380)
...+......+ ......+.+.++.++..+.......+...+..+.. .++++.
T Consensus 90 ~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~g~ 141 (420)
T PRK09528 90 FGPFFIYVFAP------------------------LLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIERV----SRRSGF 141 (420)
T ss_pred HHHHHHHHHHH------------------------HHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHHH----Hhhccc
Confidence 43322210000 00001112222223222222222222222222211 112566
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHHhhc
Q 016902 230 FFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGT 280 (380)
Q Consensus 230 ~~~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~~~~~~ 280 (380)
.++..+...++|..+++.+++++.+ .+|++.|++.+++.++.+++.+..+
T Consensus 142 ~~g~~~~~~~~g~~i~~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~ 191 (420)
T PRK09528 142 EYGRARMWGSLGWALCAFIAGILFN-INPQINFWLGSGSALILLVLLFFAK 191 (420)
T ss_pred cchhhHHhhhHHHHHHHHHHHHHHh-cCchHhHHHHHHHHHHHHHHHhccc
Confidence 6777777788999999999998876 4899999887776666555544433
No 75
>PRK03699 putative transporter; Provisional
Probab=99.48 E-value=3.8e-12 Score=125.41 Aligned_cols=173 Identities=14% Similarity=0.150 Sum_probs=131.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHH
Q 016902 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (380)
Q Consensus 70 ~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg 149 (380)
..+.+.+..++..+..+++..+++.|+++.+|++..+++...+.+.++..++.+++|+++||+ |||+.+.....+..++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~l~~~~~~~~~~ 284 (394)
T PRK03699 206 GVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFF-DLQRILTVLAGLALVL 284 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHh-chhhHHHHHHHHHHHH
Confidence 345555555666677778888999999999999999999999999999999999999999998 9999888776665555
Q ss_pred HHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhh
Q 016902 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (380)
Q Consensus 150 ~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~ 229 (380)
..++... .+...+.+..++.|++.++..+...++..++.+.+ ++.
T Consensus 285 ~~~~~~~----------------------------~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~-------~~~ 329 (394)
T PRK03699 285 MYLFVNT----------------------------DDPSHLLYAILGLGFFSSAIYTTIITLGSQQTKVA-------SPK 329 (394)
T ss_pred HHHHHHc----------------------------CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC-------CHH
Confidence 4443322 12333445556777777777788788888877643 345
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHHh
Q 016902 230 FFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (380)
Q Consensus 230 ~~~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~~~~ 278 (380)
..++.+....+|..++|.+.+++.+..||+..|++.+++.+++.++...
T Consensus 330 ~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 378 (394)
T PRK03699 330 LVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVMCIL 378 (394)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHHHHH
Confidence 5677777788999999999999999899999998777776666544333
No 76
>TIGR00898 2A0119 cation transport protein.
Probab=99.48 E-value=1.1e-12 Score=133.17 Aligned_cols=147 Identities=12% Similarity=0.104 Sum_probs=125.8
Q ss_pred HHHHHhcCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCccc
Q 016902 94 TFMFYVMHKS---FADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCD 170 (380)
Q Consensus 94 ~yl~~~~~~s---~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~~~~~c~ 170 (380)
..+.+++|++ ..+.++..+++.++..++.++.|+++||+ |||++++++.++..++.++.+++
T Consensus 113 ~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~-Grr~~~~~~~~~~~i~~~~~~~~-------------- 177 (505)
T TIGR00898 113 STIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRF-GRKKVLLLSTLVTAVSGVLTAFS-------------- 177 (505)
T ss_pred ccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhc-cchHHHHHHHHHHHHHHHHHHHc--------------
Confidence 3467789998 88899999999999999999999999997 99999999999888888777664
Q ss_pred ccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 016902 171 RISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVV 250 (380)
Q Consensus 171 ~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~~ 250 (380)
.+...+++++++.|++.++..+...+++.|.++++. |+...+++..+..+|..+++.++.
T Consensus 178 --------------~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~ 237 (505)
T TIGR00898 178 --------------PNYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQ------RAIVGTLIQVFFSLGLVLLPLVAY 237 (505)
T ss_pred --------------ccHHHHHHHHHHHHhhccchHHHHHHHhheecChhh------hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 357788999999999999999999999999999877 889988888888999999888876
Q ss_pred HhhhcchhhHHHHHHHHHHHHHHHHHHh
Q 016902 251 YIQMEHGWGSAFGALAIAMGISNMLFFI 278 (380)
Q Consensus 251 ~i~~~~gw~~~f~i~~~~~~~~~i~~~~ 278 (380)
++.+ |++.|++.++..++..+..++
T Consensus 238 ~~~~---wr~~~~~~~i~~~~~~~~~~~ 262 (505)
T TIGR00898 238 FIPD---WRWLQLAVSLPTFLFFLLSWF 262 (505)
T ss_pred HhhH---HHHHHHHHHHHHHHHHHHHHh
Confidence 6653 999998877766655554433
No 77
>PRK09952 shikimate transporter; Provisional
Probab=99.48 E-value=7.5e-12 Score=125.22 Aligned_cols=181 Identities=12% Similarity=0.006 Sum_probs=129.2
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHH
Q 016902 67 GWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIY 146 (380)
Q Consensus 67 ~~~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~ 146 (380)
+++....++...++..+.+|.+.++++.|+++.+|++......+.........++.+++|+++||+ |||++++++.++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~-grr~~~~~~~~~~ 326 (438)
T PRK09952 248 HPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRF-GRRRVYITGALIG 326 (438)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHH
Confidence 334444444456667778888888999999999999887655555556666677888999999997 9999988877665
Q ss_pred HHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhh
Q 016902 147 LAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTH 226 (380)
Q Consensus 147 ~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~ 226 (380)
.++.+++.+... .. .....+++..++.+++.+...+...++.+|.+|.+.
T Consensus 327 ~~~~~~~~~~~~-----~~-------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~------ 376 (438)
T PRK09952 327 TLSAFPFFMALE-----AQ-------------------SIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASY------ 376 (438)
T ss_pred HHHHHHHHHHHH-----cC-------------------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcch------
Confidence 554433332210 00 122333445556677777778888899999999877
Q ss_pred hhhHHHH-HHHHHHHHHHHHHHHHHHhhhcc--hhhHHHHHHHHHHHHHHHHHHh
Q 016902 227 LDRFFNF-FYLSVTVGAIVAFTLVVYIQMEH--GWGSAFGALAIAMGISNMLFFI 278 (380)
Q Consensus 227 r~~~~~~-~~~~~~iG~~i~~~i~~~i~~~~--gw~~~f~i~~~~~~~~~i~~~~ 278 (380)
|+++.++ +.++..+|+.++|.+.+++.+.. +|...+.+.+++.+++.+..+.
T Consensus 377 r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~ 431 (438)
T PRK09952 377 RYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALL 431 (438)
T ss_pred hHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHH
Confidence 9989888 66666789999999999997744 4788887777776666655443
No 78
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.47 E-value=4.7e-12 Score=133.38 Aligned_cols=132 Identities=9% Similarity=0.009 Sum_probs=103.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHH
Q 016902 111 VNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYL 190 (380)
Q Consensus 111 ~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l 190 (380)
..+..++..++.+++|+++||+ |||++++++.++..++.+++.+. .+...+
T Consensus 601 ~~l~~l~~i~G~il~g~L~Dr~-GRr~~l~~~~~lsai~~ll~~~~----------------------------~s~~~l 651 (742)
T TIGR01299 601 NFLGTLAVLPGNIVSALLMDKI-GRLRMLAGSMVLSCISCFFLSFG----------------------------NSESAM 651 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHH----------------------------ccHHHH
Confidence 3445577788999999999997 99999999988888877766653 123345
Q ss_pred HHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHH
Q 016902 191 YTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMG 270 (380)
Q Consensus 191 ~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~ 270 (380)
++.+++.+++.++..+...++.+|.+|++. |++++++.+....+|++++|.+++++.+. +...+|++.+++++
T Consensus 652 l~~~~l~g~~~~~~~~~~~a~~aEl~Pt~~------Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~ll 724 (742)
T TIGR01299 652 IALLCLFGGLSIAAWNALDVLTVELYPSDK------RATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALA 724 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHH
Confidence 555667777777778889999999999887 99999999999999999999999987653 45667777777666
Q ss_pred HHHHHHHh
Q 016902 271 ISNMLFFI 278 (380)
Q Consensus 271 ~~~i~~~~ 278 (380)
++.++.++
T Consensus 725 l~~ll~~~ 732 (742)
T TIGR01299 725 CGGLLALK 732 (742)
T ss_pred HHHHHHHh
Confidence 65554443
No 79
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.47 E-value=6.7e-12 Score=123.46 Aligned_cols=171 Identities=13% Similarity=0.078 Sum_probs=129.9
Q ss_pred HHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhc
Q 016902 80 AERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATM 159 (380)
Q Consensus 80 ~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~ 159 (380)
+..+.++.+..+++.|+.+ .|++ ..+.....+.++..++.++.|+++||+ ||++.+.++.++..++.+++...
T Consensus 227 ~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~--- 299 (399)
T PRK05122 227 LASIGFGTIATFITLYYAA-RGWD--GAALALTLFGVAFVGARLLFGNLINRL-GGLRVAIVSLLVEILGLLLLWLA--- 299 (399)
T ss_pred HHHHHHHHHHHHHHHHHHH-cccc--cchHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHh---
Confidence 3445555566777777754 4653 345556677777888889999999997 99999988888777777665543
Q ss_pred ccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHH
Q 016902 160 KVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVT 239 (380)
Q Consensus 160 ~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~ 239 (380)
.+...++++.++.|++.+...+.......|.+|++. |++.+++++....
T Consensus 300 -------------------------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~~~ 348 (399)
T PRK05122 300 -------------------------PSPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQN------RGAALGAYSVFLD 348 (399)
T ss_pred -------------------------ccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHH------HHHHHHHHHHHHH
Confidence 234455667788899988888877788888888766 9999999999999
Q ss_pred HHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHHhhcccccccCC
Q 016902 240 VGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLP 288 (380)
Q Consensus 240 iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~~~~~~~~~~~~~~ 288 (380)
+|..+++.+.+++.+..||++.|++.+++.++++++....+++++++.|
T Consensus 349 ~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (399)
T PRK05122 349 LSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYRRAPRAVP 397 (399)
T ss_pred HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhcccccccCC
Confidence 9999999999999998999999998888777777666555554444433
No 80
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.47 E-value=5.8e-12 Score=124.50 Aligned_cols=173 Identities=12% Similarity=0.042 Sum_probs=140.1
Q ss_pred hHHH-HHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHH
Q 016902 68 WIAA-LFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFAD-SSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTI 145 (380)
Q Consensus 68 ~~~~-~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~-a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l 145 (380)
|+.. .++++..|+-.+-. ..+.+..|+.+++|++..+ .+.+.+.|..++.++.+++|+++||+ |-|+++.++.+.
T Consensus 25 W~~~~~~lC~fGF~~e~R~--n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrl-G~K~vL~l~~l~ 101 (511)
T TIGR00806 25 WRVLVLYLCFYGFMAQFRP--GESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYL-RYKPVLVLQALS 101 (511)
T ss_pred hhHHHHHHHHHHHHHHhhc--hHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHH
Confidence 4433 33444444433332 3345677999999999999 99999999999999999999999998 999999999999
Q ss_pred HHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhh
Q 016902 146 YLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKT 225 (380)
Q Consensus 146 ~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~ 225 (380)
..+..+++.++ .+...+.+.|++.|++.|+.. +...+++..||+++
T Consensus 102 Wsl~t~L~~fa----------------------------~Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kE----- 147 (511)
T TIGR00806 102 FVCVWLLLLLG----------------------------TSVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSR----- 147 (511)
T ss_pred HHHHHHHHHHH----------------------------HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHH-----
Confidence 99888888875 357789999999999999988 99999999999777
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHH---HHHHHHHHHHHHHHHhh
Q 016902 226 HLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAF---GALAIAMGISNMLFFIG 279 (380)
Q Consensus 226 ~r~~~~~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f---~i~~~~~~~~~i~~~~~ 279 (380)
|+++.+++..+..+|.++++.+++++ ..+||++-+ +|..+...+++++-++.
T Consensus 148 -R~ratsi~~sg~~vG~~Ia~~L~qll-~s~gWr~y~~Ln~Isl~s~~~a~~~a~~L 202 (511)
T TIGR00806 148 -YQRAAAYSRAAVLLGVFLSSVLGQLL-VTLGWISYSTLNIISLVFMTFSVFLALFL 202 (511)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCchhHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999994 467888654 45555555665554443
No 81
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.47 E-value=4.1e-12 Score=141.30 Aligned_cols=154 Identities=15% Similarity=0.111 Sum_probs=121.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHH
Q 016902 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFA--DSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYL 147 (380)
Q Consensus 70 ~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~--~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~ 147 (380)
.....++..++..+...++...+..++...++.+.. ..+++.+++.++..++.+++|+++||+ |||++++++.++.+
T Consensus 10 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~-grk~~l~~~~~~~~ 88 (1146)
T PRK08633 10 GFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKF-SKNRVIRIVKLFEV 88 (1146)
T ss_pred hhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccc-cHHHHHHHHHHHHH
Confidence 344444555555555544545556666666776543 357888899999999999999999998 99999999988777
Q ss_pred HHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhh
Q 016902 148 AGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHL 227 (380)
Q Consensus 148 lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r 227 (380)
++.+++.+.... .+...+++++++.|++.+...+...++++|.+++++ |
T Consensus 89 ~~~~~~~~~~~~-------------------------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------r 137 (1146)
T PRK08633 89 GLTLLIVLAYYL-------------------------GWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKEN------L 137 (1146)
T ss_pred HHHHHHHHHHHH-------------------------ccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCccc------c
Confidence 666655543210 246778899999999999999999999999999877 9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 016902 228 DRFFNFFYLSVTVGAIVAFTLVVYIQME 255 (380)
Q Consensus 228 ~~~~~~~~~~~~iG~~i~~~i~~~i~~~ 255 (380)
+.+++++..+..+|.++|+.+++++.+.
T Consensus 138 ~~~~~~~~~~~~ig~~lg~~l~~~l~~~ 165 (1146)
T PRK08633 138 SRANGLLEAFTIVAILAGTALFSFLFES 165 (1146)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999998765
No 82
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.47 E-value=6.3e-12 Score=119.85 Aligned_cols=171 Identities=20% Similarity=0.239 Sum_probs=144.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhH-HHHHHHHHHHHHH
Q 016902 72 LFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYW-TIAIFTTIYLAGL 150 (380)
Q Consensus 72 ~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~-~i~i~~~l~~lg~ 150 (380)
+...+..++..........+++.|+.+.+|.+..+.+........+..++.++.|+++||+ |||+ .+.++.++..++.
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~ 256 (352)
T cd06174 178 LLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRL-GRRRLLLLIGLLLAALGL 256 (352)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHHHH
Confidence 3344445555566666777788888887899999999999999999999999999999998 9999 9999988888887
Q ss_pred HHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhH
Q 016902 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (380)
Q Consensus 151 ~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~ 230 (380)
+.+... .+...+++..++.+++.+...+....+..|.+|+++ |++.
T Consensus 257 ~~~~~~----------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~ 302 (352)
T cd06174 257 LLLALA----------------------------PSLALLLVALLLLGFGLGFAFPALLTLASELAPPEA------RGTA 302 (352)
T ss_pred HHHHHh----------------------------ccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHH------HHHH
Confidence 776653 235567778889999999999999999999999876 9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHH
Q 016902 231 FNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFF 277 (380)
Q Consensus 231 ~~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~~~ 277 (380)
+++++...++|..+++.+.+++.+..+|++.|.+.+++.+++.++.+
T Consensus 303 ~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 303 SGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLL 349 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhe
Confidence 99999999999999999999999889999999988888777766543
No 83
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.46 E-value=4e-12 Score=122.73 Aligned_cols=168 Identities=15% Similarity=0.081 Sum_probs=129.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHH
Q 016902 72 LFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLT 151 (380)
Q Consensus 72 ~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~ 151 (380)
+.+....++..+....+....+.|. +++|.+....+.....+.++..++.+++|+++||+ |||+.+.++.++..++.+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~ 285 (377)
T TIGR00890 208 WVLYLSFFLNAVSGLLLIGLYKPYG-QSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKI-GRQKTMSIVFGISAVGMA 285 (377)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhhhhHHHHHHHHHHH
Confidence 3333344444444444555556665 56899988888888999999999999999999998 999999998888888776
Q ss_pred HHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHH
Q 016902 152 GITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFF 231 (380)
Q Consensus 152 ~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~ 231 (380)
++..... .....+++..++.+++.+...+..+.+.+|.+|+++ |++.+
T Consensus 286 ~~~~~~~--------------------------~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~------~~~~~ 333 (377)
T TIGR00890 286 AMLFIPM--------------------------LNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPAN------SAANY 333 (377)
T ss_pred HHHHccc--------------------------chhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhh------hhhHh
Confidence 6554310 112234445566778878777788889999999877 99999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHH
Q 016902 232 NFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISN 273 (380)
Q Consensus 232 ~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~ 273 (380)
++++....+|..+++.+.+++.+..||++.|.+.+++.++++
T Consensus 334 g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 334 GFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTSL 375 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHhc
Confidence 999999999999999999999999999999988777766554
No 84
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.45 E-value=7.1e-12 Score=123.42 Aligned_cols=178 Identities=10% Similarity=-0.108 Sum_probs=128.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHH
Q 016902 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (380)
Q Consensus 70 ~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg 149 (380)
..|......++...++..+...++.|+++++|++..+.+.+.+.+.++..++.+++|+++||+ |||+.++++..+..++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~ 81 (396)
T TIGR00882 3 NFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKL-GLKKHLLWIISGLLVL 81 (396)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHH
Confidence 356666777777777777888999999999999999999999999999999999999999998 9999998877766555
Q ss_pred HHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhh
Q 016902 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (380)
Q Consensus 150 ~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~ 229 (380)
...+......+.+. ......+++++++.+++.+...+....+..|.-+ + ++.
T Consensus 82 ~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~------~~~ 133 (396)
T TIGR00882 82 FAPFFIYVFGPLLQ--------------------SNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR--N------SNF 133 (396)
T ss_pred HHHHHHHHhhhHHH--------------------HHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhh--h------ccc
Confidence 44332211000000 0112334555677778877777777666655322 1 334
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHH
Q 016902 230 FFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFF 277 (380)
Q Consensus 230 ~~~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~~~ 277 (380)
.++......++|..+++.+++.+.+ .+|++.|++.+++.++..++.+
T Consensus 134 ~~g~~~~~~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~ 180 (396)
T TIGR00882 134 EYGKARMFGCVGWALCASIAGILFS-IDPQIVFWLGSGFALILMLLLM 180 (396)
T ss_pred ccchhhhhcccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHHHHH
Confidence 5566667778999999999888765 5999999887776665554433
No 85
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.45 E-value=3.3e-12 Score=130.47 Aligned_cols=151 Identities=15% Similarity=0.136 Sum_probs=119.6
Q ss_pred HhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCcc
Q 016902 90 VNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNC 169 (380)
Q Consensus 90 ~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~~~~~c 169 (380)
.+...|+.+++|-+ ....++.+.+.+...+..++.|.|||.| |||+.++++.++.++|.++.+-+
T Consensus 64 a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlf-GRr~~~i~g~~l~vvG~Iv~atA------------- 128 (599)
T PF06609_consen 64 ASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLF-GRRYFFIIGSLLGVVGSIVCATA------------- 128 (599)
T ss_pred HHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHh-cchHHHHHHHHHHHhHHHHhhcC-------------
Confidence 45567888899876 4556777888899999999999999997 99999999999999999988754
Q ss_pred cccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 016902 170 DRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLV 249 (380)
Q Consensus 170 ~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~ 249 (380)
.+...++.+..+.|+|.|... +....++|..|.+. |..+..+..+...+...+++.+.
T Consensus 129 ---------------~~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~------R~~~~~~~~~~~i~~~~~~~~ia 186 (599)
T PF06609_consen 129 ---------------QNMNTFIAGMVLYGVGAGVQE-LAALAISELVPNKW------RGLGLAIASIPFIITTWISPLIA 186 (599)
T ss_pred ---------------CcHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccch------hhhHhHHHHHHHHhhhcccHHHH
Confidence 467889999999999976554 55667899999877 77766665555555555677777
Q ss_pred HHhhhcchhhHHHHHHHHHHHHHHHHHH
Q 016902 250 VYIQMEHGWGSAFGALAIAMGISNMLFF 277 (380)
Q Consensus 250 ~~i~~~~gw~~~f~i~~~~~~~~~i~~~ 277 (380)
..+..+.+|||.|++.++...++++..+
T Consensus 187 ~~~~~~~~WRw~~~~~~i~~~i~~vl~~ 214 (599)
T PF06609_consen 187 QLFAAHSGWRWIFYIFIIWSGIALVLIF 214 (599)
T ss_pred HHhccCCCcchHHHHHHHHHHHHHHHHH
Confidence 6666667899999998887777665433
No 86
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.44 E-value=8.3e-12 Score=125.33 Aligned_cols=178 Identities=17% Similarity=0.139 Sum_probs=122.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-chhHHH-HHHHHHH
Q 016902 69 IAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYL-GRYWTI-AIFTTIY 146 (380)
Q Consensus 69 ~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~-GR~~~i-~i~~~l~ 146 (380)
+.++...+..++.....+++..++|.|+++.+|++..+++.....+.++..++.+++|+++||+. ||++.. .+...+.
T Consensus 253 ~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~ 332 (452)
T PRK11273 253 KLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLV 332 (452)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHH
Confidence 34566666666666777888889999999999999888888888888888889999999999972 334332 2222233
Q ss_pred HHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhh
Q 016902 147 LAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTH 226 (380)
Q Consensus 147 ~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~ 226 (380)
.++.+++.+. +. .+....++++++.|.+..+.......+..|.+|++.
T Consensus 333 ~~~~~~~~~~-------~~-------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------ 380 (452)
T PRK11273 333 TIATIVYWLN-------PA-------------------GNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKA------ 380 (452)
T ss_pred HHHHHHHHHh-------cc-------------------cChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhh------
Confidence 3333322221 00 122233344444554433333344456779999877
Q ss_pred hhhHHHHHHHHHHHHHHH-HHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHHh
Q 016902 227 LDRFFNFFYLSVTVGAIV-AFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (380)
Q Consensus 227 r~~~~~~~~~~~~iG~~i-~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~~~~ 278 (380)
|++.+++++...++|+.+ +|.+.+++.+..||++.|++.+++.+++++....
T Consensus 381 ~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 433 (452)
T PRK11273 381 AGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIV 433 (452)
T ss_pred hhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 999999998888888654 7999999999999999999887777666555443
No 87
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.44 E-value=1.7e-11 Score=118.92 Aligned_cols=157 Identities=10% Similarity=0.060 Sum_probs=120.9
Q ss_pred HHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCC
Q 016902 85 YFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMP 164 (380)
Q Consensus 85 ~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~ 164 (380)
......+++.|+++++|.+..+.+.......+....+.+++|+++||+ |||+++.++.++..++.+.+...
T Consensus 215 ~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~-------- 285 (375)
T TIGR00899 215 NILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRF-GKRRLMLLAALAGVAFYTGLAAD-------- 285 (375)
T ss_pred HHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-cchhHHHHHHHHHHHHHHHHHHH--------
Confidence 334455678899899999998888877777677777788999999998 99999888776655544433322
Q ss_pred CCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHH
Q 016902 165 NQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIV 244 (380)
Q Consensus 165 ~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i 244 (380)
.+...+++...+.+++.|...+....+..|.+|+ + +++.+++++...++|..+
T Consensus 286 --------------------~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~~~~g~~~ 338 (375)
T TIGR00899 286 --------------------NSLWALLMLQLLNAIFIGILAGIGMLYFQDLMPG-R------AGAATTLYTNTGRVGWII 338 (375)
T ss_pred --------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-h------hhHHHHHHHHHHHHHHHH
Confidence 2344455566677888777777777888888864 2 568899999999999999
Q ss_pred HHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHH
Q 016902 245 AFTLVVYIQMEHGWGSAFGALAIAMGISNMLFF 277 (380)
Q Consensus 245 ~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~~~ 277 (380)
++.+.+++.+..||+..|++.+++.+++.++..
T Consensus 339 g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~ 371 (375)
T TIGR00899 339 AGSVGGILAERWSYHAVYWFAIVMLIVALFCLL 371 (375)
T ss_pred HHHHHHHHHHhccchhHHHHHHHHHHHHHHHHh
Confidence 999999999988999999988887777666543
No 88
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.43 E-value=2.7e-12 Score=124.62 Aligned_cols=169 Identities=14% Similarity=0.052 Sum_probs=127.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHH
Q 016902 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (380)
Q Consensus 70 ~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg 149 (380)
..+......++....++.+..+++.|+++++|.+..+.+.......++..++.+++|+++||+ |||+.+.++..+..+.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~ 298 (394)
T TIGR00883 220 PFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRI-GRRPVLIIFTVLAALL 298 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHHHHH
Confidence 455566666777777777888899999889999999998888888899999999999999998 9999887665544333
Q ss_pred H-HHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhh
Q 016902 150 L-TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLD 228 (380)
Q Consensus 150 ~-~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~ 228 (380)
. ..+.... .+ .+...+++..++.+++.+...++..++.+|.+|++. |+
T Consensus 299 ~~~~~~~~~------~~-------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~~ 347 (394)
T TIGR00883 299 AVPLLMALL------DS-------------------GSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEV------RY 347 (394)
T ss_pred HHHHHHHHh------cC-------------------CchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccc------ee
Confidence 2 2221110 00 133445566677788888888899999999999877 88
Q ss_pred hHHHH-HHHHHHHHHHHHHHHHHHhhhcch-hhHHHHHHHHHHH
Q 016902 229 RFFNF-FYLSVTVGAIVAFTLVVYIQMEHG-WGSAFGALAIAMG 270 (380)
Q Consensus 229 ~~~~~-~~~~~~iG~~i~~~i~~~i~~~~g-w~~~f~i~~~~~~ 270 (380)
+++++ +.++..+|+.++|.+.+++.+..| |++.++..+++.+
T Consensus 348 ~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~l 391 (394)
T TIGR00883 348 TGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALAL 391 (394)
T ss_pred eEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHHH
Confidence 88887 566677899999999999998888 8776665554443
No 89
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.43 E-value=4e-12 Score=123.19 Aligned_cols=146 Identities=16% Similarity=0.135 Sum_probs=120.1
Q ss_pred HhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCcc
Q 016902 90 VNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNC 169 (380)
Q Consensus 90 ~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~~~~~c 169 (380)
..+.+.+.+++|++..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++..++.+.. ..
T Consensus 20 ~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~-~~------------- 84 (355)
T TIGR00896 20 GPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRF-GEERSVAAGLLLIAAGILIR-SA------------- 84 (355)
T ss_pred cccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CchHHHHHHHHHHHHHHHHH-Hh-------------
Confidence 3455678889999999999999999999999999999999998 99999999988877776654 22
Q ss_pred cccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 016902 170 DRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLV 249 (380)
Q Consensus 170 ~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~ 249 (380)
.+...+++++++.|+|.+...+.......|.++ ++ |+..+++++.+.++|..+++.+.
T Consensus 85 ---------------~~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~~~~g~~i~~~~~ 142 (355)
T TIGR00896 85 ---------------PGTALLFAGTALIGVGIAIINVLLPSLIKRDFP-QR------VGLMTGLYSMALMGGAALAAAAT 142 (355)
T ss_pred ---------------ccHHHHHHHHHHHHHHHHHHhccchHHHHHhCc-ch------hhHHHHHHHHHHHHHHHHHHHHH
Confidence 245667888999999998888888888888876 34 89999999999999999999998
Q ss_pred HHhhhcc--hhhHHHHHHHHHHHHH
Q 016902 250 VYIQMEH--GWGSAFGALAIAMGIS 272 (380)
Q Consensus 250 ~~i~~~~--gw~~~f~i~~~~~~~~ 272 (380)
+++.+.. +|++.|.+.+++.++.
T Consensus 143 ~~l~~~~~~~w~~~f~~~~~~~~~~ 167 (355)
T TIGR00896 143 VPLAQHSGGHWQQALAWWALPALLA 167 (355)
T ss_pred HHHHHhhhhhHHHHHHHHHHHHHHH
Confidence 8887654 3998887665544433
No 90
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.42 E-value=4.4e-12 Score=129.57 Aligned_cols=141 Identities=15% Similarity=0.135 Sum_probs=126.0
Q ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCccccccccc
Q 016902 97 FYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLL 176 (380)
Q Consensus 97 ~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~ 176 (380)
.+.++.+.....+..+++.++..+|++++|++||++ |||++++++.++.+++.++.+++
T Consensus 110 ~~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~-GRk~~~~~~~~~~~i~~~~~a~a-------------------- 168 (521)
T KOG0255|consen 110 WNLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRF-GRKPVLLVSLLLFIIFGILTAFA-------------------- 168 (521)
T ss_pred hceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhc-ccHHHHHHHHHHHHHHHHHHHHh--------------------
Confidence 356777888899999999999999999999999995 99999999999999999887775
Q ss_pred CCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 016902 177 GSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEH 256 (380)
Q Consensus 177 ~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~~~ 256 (380)
.+...+++.|++.|++.++...+...+++|.++++. |+.+.++ ......++.+++.+++|+..
T Consensus 169 --------~~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~------R~~~~~~-~~~~~~~~~~~~~~~a~~~~-- 231 (521)
T KOG0255|consen 169 --------PNYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQ------RGLALTL-GGFFFVGGLMLPAGAAYITR-- 231 (521)
T ss_pred --------CcHHHHHHHHHHHHhhccchhHHhHhhheeecCcch------hhHHHHH-HHHHHHHHHHHHHHHHHHHh--
Confidence 578899999999999999999999999999999888 9999998 77888888899999999877
Q ss_pred hhhHHHHHHHHHHHHHHHH
Q 016902 257 GWGSAFGALAIAMGISNML 275 (380)
Q Consensus 257 gw~~~f~i~~~~~~~~~i~ 275 (380)
+|||.+++..+..++.++.
T Consensus 232 ~Wr~~~~~~~~~~~~~~~~ 250 (521)
T KOG0255|consen 232 DWRWLFWIISIPSGLFLLL 250 (521)
T ss_pred hHHHHHHHHHHHHHHHHHH
Confidence 8999999888777666555
No 91
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.42 E-value=2.9e-11 Score=119.17 Aligned_cols=167 Identities=10% Similarity=-0.009 Sum_probs=125.2
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHH
Q 016902 74 IFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGI 153 (380)
Q Consensus 74 i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l 153 (380)
+....++....++.+..+++.|+.+ .|++....+.+...+.++..++.++.|+++||+ ||++.+.++.+...++.+++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~ 302 (406)
T PRK11551 225 LWISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRL-RPRRVVLLIYAGILASLAAL 302 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHH
Confidence 3333444455666677778888764 799999999999999999999999999999998 99999887666555554444
Q ss_pred HhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHH
Q 016902 154 TLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNF 233 (380)
Q Consensus 154 ~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~ 233 (380)
... .+...+++..++.+++.++..+...++..|.+|++. |++.+++
T Consensus 303 ~~~----------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~ 348 (406)
T PRK11551 303 AAA----------------------------PSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQV------RGTGVGA 348 (406)
T ss_pred Hhc----------------------------CcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhh------hhhhhhH
Confidence 332 123344555567777777788888999999999887 9999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcch-hhHHHHHHHHHHHHHHHHH
Q 016902 234 FYLSVTVGAIVAFTLVVYIQMEHG-WGSAFGALAIAMGISNMLF 276 (380)
Q Consensus 234 ~~~~~~iG~~i~~~i~~~i~~~~g-w~~~f~i~~~~~~~~~i~~ 276 (380)
++....+|..++|.+.+++.+..+ |...+++...+.+++.+..
T Consensus 349 ~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (406)
T PRK11551 349 AVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAA 392 (406)
T ss_pred HHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999987654 5666666555555444443
No 92
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.41 E-value=4.5e-11 Score=121.45 Aligned_cols=177 Identities=14% Similarity=0.110 Sum_probs=130.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhh----cchhHH-HHHH
Q 016902 68 WIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAY----LGRYWT-IAIF 142 (380)
Q Consensus 68 ~~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~----~GR~~~-i~i~ 142 (380)
||+.+.++...+...+..+.....++.|++ +.|.+..+.+....+. ..+++.+++|+++||+ +|||+. ++++
T Consensus 11 ~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~-~~g~~~~~ig~~~~~~--~~~~~~~l~gpl~Dr~~~~~~Grrr~~ll~~ 87 (491)
T PRK11010 11 QPNSAILLILGFASGLPLALTSGTLQAWMT-VENIDLKTIGFFSLVG--QAYVFKFLWSPLMDRYTPPFLGRRRGWLLAT 87 (491)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCCHHHHHHHHHHH--HHHHHHHHHHHHHHcccccCCCCchHHHHHH
Confidence 334566666666666777666666777765 5689888877752222 2236789999999995 399886 5566
Q ss_pred HHHHHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCch
Q 016902 143 TTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKD 222 (380)
Q Consensus 143 ~~l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~ 222 (380)
.++..++.+.+++.. |. .+...+.+.+++.+++.+...+...++.+|.+|+++
T Consensus 88 ~i~~~~~~~~~a~~~------~~-------------------~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~-- 140 (491)
T PRK11010 88 QLLLLVAIAAMGFLE------PG-------------------TQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEE-- 140 (491)
T ss_pred HHHHHHHHHHHHHcC------Cc-------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhh--
Confidence 666656665555421 11 356677778888899989889999999999999777
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhh-cchhhHHHHHHHHHHHHHHHHHHh
Q 016902 223 YKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQM-EHGWGSAFGALAIAMGISNMLFFI 278 (380)
Q Consensus 223 ~~~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~-~~gw~~~f~i~~~~~~~~~i~~~~ 278 (380)
|+++.++...+..+|..+++.+..++.+ ..||+..|++.+++.++..+..+.
T Consensus 141 ----rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~~ 193 (491)
T PRK11010 141 ----RGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATLL 193 (491)
T ss_pred ----hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999888 569999999888776665544333
No 93
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.41 E-value=1.3e-11 Score=126.11 Aligned_cols=134 Identities=19% Similarity=0.258 Sum_probs=116.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcch
Q 016902 106 DSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSW 185 (380)
Q Consensus 106 ~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~ 185 (380)
+.+++.+.+.+++.++.++.|+++|++ |||++++++.+++.+|.++++.+ .
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d~~-GRk~~l~~~~~~~~iG~ii~~~a----------------------------~ 140 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGDRI-GRKKTLLLAVVLFLIGAIIIALA----------------------------P 140 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHh----------------------------h
Confidence 347999999999999999999999998 99999999999999999999986 4
Q ss_pred hHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhc--chhhHHHH
Q 016902 186 QMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQME--HGWGSAFG 263 (380)
Q Consensus 186 ~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~~--~gw~~~f~ 263 (380)
+...++++|++.|+|.|+....++.+++|..|.+. |+...+.+++..++|.+++. +.++..++ .+||..++
T Consensus 141 ~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~------RG~l~~~~~l~~~~Gi~~~~-~~~~~~~~~~~~Wr~~~~ 213 (513)
T KOG0254|consen 141 SWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHI------RGTLVSLYQLFITIGILLGY-CINYGTSKVYAGWRIPLG 213 (513)
T ss_pred hHHHHHHHHHHhccchhhhhhcchhhHhhcCChhh------hHHHHHHHHHHHHHHHHHHH-HHhhhhccCCccHHHHHH
Confidence 68899999999999999999999999999999888 99999999999999999994 44444444 48998888
Q ss_pred HHHHHHHHHHHH
Q 016902 264 ALAIAMGISNML 275 (380)
Q Consensus 264 i~~~~~~~~~i~ 275 (380)
+..+..++..+.
T Consensus 214 ~~~i~~~~~~~~ 225 (513)
T KOG0254|consen 214 LALIPAVILALG 225 (513)
T ss_pred HHHHHHHHHHHH
Confidence 766665555554
No 94
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.41 E-value=2.2e-11 Score=135.56 Aligned_cols=146 Identities=14% Similarity=0.028 Sum_probs=108.7
Q ss_pred HHhcCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCcccccccc
Q 016902 97 FYVMHKSF-ADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQL 175 (380)
Q Consensus 97 ~~~~~~s~-~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~ 175 (380)
+...+.+. ...++..+.+.+...++.+++|+++||| |||+++.+...+.++..++..+....
T Consensus 43 ~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~-~rk~~~~~~~~~~~~~~~~~~~~~~~---------------- 105 (1140)
T PRK06814 43 SGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKY-DKAKLAKILKFAEIGIAALAIYGFHL---------------- 105 (1140)
T ss_pred ccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhc-cHHHHHHHHHHHHHHHHHHHHHHHHH----------------
Confidence 33334433 3456777788899999999999999998 99998644222222111111111000
Q ss_pred cCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 016902 176 LGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQME 255 (380)
Q Consensus 176 ~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~~ 255 (380)
.+...+++++++.|++.+...+...+++.|.++++. ++.+.++...+.++|.++||.+++++...
T Consensus 106 ---------~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~------~~~a~~~~~~~~~ig~~igp~l~g~l~~~ 170 (1140)
T PRK06814 106 ---------NSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDE------LLGANALVEAGTFIAILLGTIIGGLATIS 170 (1140)
T ss_pred ---------hhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccc------cchhhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 357788999999999999999999999999999877 99999999999999999999999999988
Q ss_pred chhhHHHHHHHHHHHHHHH
Q 016902 256 HGWGSAFGALAIAMGISNM 274 (380)
Q Consensus 256 ~gw~~~f~i~~~~~~~~~i 274 (380)
.+|++.|++.+++.+++++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~ 189 (1140)
T PRK06814 171 GNFVILVALLMGIAVLGWL 189 (1140)
T ss_pred cccHHHHHHHHHHHHHHHH
Confidence 8999998544444443333
No 95
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.41 E-value=2.8e-11 Score=117.26 Aligned_cols=158 Identities=13% Similarity=0.126 Sum_probs=115.8
Q ss_pred HHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhh----cchhHHH-HHHHHHHHHHHHHHHhhhhcccC
Q 016902 88 LSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAY----LGRYWTI-AIFTTIYLAGLTGITLCATMKVF 162 (380)
Q Consensus 88 i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~----~GR~~~i-~i~~~l~~lg~~~l~l~~~~~~l 162 (380)
+.....+.+.+++|++.++.+..... .....+ .+++|+++||+ +||||.+ +++.++..+.+..+.+..
T Consensus 6 ~~~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~----- 78 (356)
T TIGR00901 6 LVGNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLV----- 78 (356)
T ss_pred hHHhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCC-----
Confidence 34445555667899999998888654 333333 78999999997 5999975 455555555554544321
Q ss_pred CCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHH
Q 016902 163 MPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGA 242 (380)
Q Consensus 163 ~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~ 242 (380)
+. .+...+++..++.+++.+...+...++.+|.+|+++ |+.+.++...+.++|.
T Consensus 79 -~~-------------------~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~------r~~~~~~~~~~~~~G~ 132 (356)
T TIGR00901 79 -PS-------------------TDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEE------LGYGSTIYIVGYRAGM 132 (356)
T ss_pred -cc-------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhh------hchHHHHHHHHHHHHH
Confidence 00 244445555556777778888899999999998777 9999999999999999
Q ss_pred HHHHHHHHHhhhcch--------hhHHHHHHHHHHHHHHHHHHh
Q 016902 243 IVAFTLVVYIQMEHG--------WGSAFGALAIAMGISNMLFFI 278 (380)
Q Consensus 243 ~i~~~i~~~i~~~~g--------w~~~f~i~~~~~~~~~i~~~~ 278 (380)
++++.+++++....| |+..|++.+++.++++++.++
T Consensus 133 ~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~~ 176 (356)
T TIGR00901 133 LLSGSLALVLASPEFANTGLITLWGYIFFWTALLILPGLLVTLF 176 (356)
T ss_pred HHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHH
Confidence 999999998888777 999999888877665554443
No 96
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.40 E-value=4.1e-12 Score=122.47 Aligned_cols=171 Identities=13% Similarity=0.114 Sum_probs=147.4
Q ss_pred HHHHHHHHHHHHHHHHHHHh---HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHH
Q 016902 72 LFIFGNEMAERMAYFGLSVN---MVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLA 148 (380)
Q Consensus 72 ~~i~~~~~~~~~~~~~i~~~---l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~l 148 (380)
+.++...++...++|-+.-| ..+++.++.++|.++.+.+.+.+.+++.++-.+.|.++||. +.|..+-+++++..+
T Consensus 28 ~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~-npr~fm~~gLilsai 106 (448)
T COG2271 28 IQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRS-NPRYFMAFGLILSAI 106 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccC-CCceeehHHHHHHHH
Confidence 45556666677777765443 45788999999999999999999999999999999999998 999999999999988
Q ss_pred HHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhh
Q 016902 149 GLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLD 228 (380)
Q Consensus 149 g~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~ 228 (380)
..+++.++ .+...+.+..++.|+..|.-.|++...++..|+.++ ||
T Consensus 107 ~nil~Gfs----------------------------~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~e------RG 152 (448)
T COG2271 107 VNILFGFS----------------------------PSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKE------RG 152 (448)
T ss_pred HHHHHhhh----------------------------hHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccc------cC
Confidence 88888875 356777778889999999999999999999999888 99
Q ss_pred hHHHHHHHHHHHHHHHHHHHH--HHhhhcchhhHHHHHHHHHHHHHHHHHH
Q 016902 229 RFFNFFYLSVTVGAIVAFTLV--VYIQMEHGWGSAFGALAIAMGISNMLFF 277 (380)
Q Consensus 229 ~~~~~~~~~~~iG~~i~~~i~--~~i~~~~gw~~~f~i~~~~~~~~~i~~~ 277 (380)
+..++|+.+-|+|+.+.+.+. +++..+.+|+.+|++++++.++..++.+
T Consensus 153 ~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~ 203 (448)
T COG2271 153 TWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILL 203 (448)
T ss_pred ceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998 8898888999999999887655444433
No 97
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.40 E-value=2.8e-11 Score=119.08 Aligned_cols=163 Identities=12% Similarity=0.045 Sum_probs=122.6
Q ss_pred HHHHHHHHHhHHHHHHHhcCCCHH---HHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhh
Q 016902 82 RMAYFGLSVNMVTFMFYVMHKSFA---DSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCAT 158 (380)
Q Consensus 82 ~~~~~~i~~~l~~yl~~~~~~s~~---~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~ 158 (380)
.+....+...++.|+.+..+.... ..+.+..++.++..++.++.|+++||+ ||++.+.++.++..++.+++...
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~-- 308 (408)
T PRK09874 232 QVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRI-GPEKILITALIFSVLLLIPMSFV-- 308 (408)
T ss_pred HHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccchhHHHHHHHHHHHHHHHHHh--
Confidence 334444556677777765443322 233444555666777888899999998 99999998887777666554432
Q ss_pred cccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHH
Q 016902 159 MKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSV 238 (380)
Q Consensus 159 ~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~ 238 (380)
.+...+++.+++.|++.+...+....+..+..+++. +++.+++++...
T Consensus 309 --------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~ 356 (408)
T PRK09874 309 --------------------------QTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQI------AGRIFSYNQSFR 356 (408)
T ss_pred --------------------------ccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCccc------ceeeehHHHHHH
Confidence 234456677788899999888888888888888776 899999999999
Q ss_pred HHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHHhh
Q 016902 239 TVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIG 279 (380)
Q Consensus 239 ~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~~~~~ 279 (380)
.+|..++|.+++++.+..||++.|++.+++.+++.+..+..
T Consensus 357 ~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~ 397 (408)
T PRK09874 357 DIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNS 397 (408)
T ss_pred HHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998888877776655443
No 98
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.40 E-value=3.2e-11 Score=120.51 Aligned_cols=179 Identities=15% Similarity=0.080 Sum_probs=121.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcch--hHHHHHHHHHHH
Q 016902 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGR--YWTIAIFTTIYL 147 (380)
Q Consensus 70 ~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR--~~~i~i~~~l~~ 147 (380)
.++.+.+..++..+.++++.++++.|+.+++|++..+++...+.+.++..++.+++|+++||+.+| +.......+...
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~ 323 (434)
T PRK11663 244 YIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGIL 323 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHH
Confidence 345555555555666667788899999888999999999999999999999999999999997322 232222222222
Q ss_pred HHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhh
Q 016902 148 AGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHL 227 (380)
Q Consensus 148 lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r 227 (380)
+..+.+.+. + . .+....++..+++|++..+.........+|.++++. |
T Consensus 324 ~~~~~~~~~---~----~-------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~ 371 (434)
T PRK11663 324 LSVGSLWLM---P----F-------------------ASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEA------A 371 (434)
T ss_pred HHHHHHHHc---c----c-------------------ccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhh------H
Confidence 222111111 0 0 112222233333444433333344556688888766 9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHHhhc
Q 016902 228 DRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGT 280 (380)
Q Consensus 228 ~~~~~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~~~~~~ 280 (380)
++..++.+...++|..++|.+.+++.+..||...|++.+++.+++.++.+...
T Consensus 372 g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~ 424 (434)
T PRK11663 372 GAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLLPFL 424 (434)
T ss_pred HhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999888887776665544433
No 99
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.40 E-value=1.9e-11 Score=123.72 Aligned_cols=150 Identities=16% Similarity=0.122 Sum_probs=113.7
Q ss_pred HHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCCCC
Q 016902 87 GLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQ 166 (380)
Q Consensus 87 ~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~~~ 166 (380)
++..+++.|++.++|++..+++.+.+.+.++..++.+++|+++||+ |||++++++.++..++.+++.... +
T Consensus 293 ~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~-------~- 363 (496)
T PRK03893 293 PIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWL-GTRKAYVCSLLISQLLIIPVFAIG-------G- 363 (496)
T ss_pred hHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHhhcc-------c-
Confidence 4567789999889999999999999999999999999999999997 999998887766555544332210 0
Q ss_pred CcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHH
Q 016902 167 DNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAF 246 (380)
Q Consensus 167 ~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~ 246 (380)
.+...+.+..++.++...+..+..+++..|.+|++. |++.+++++....+|+.++|
T Consensus 364 ------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~g~~lgp 419 (496)
T PRK03893 364 ------------------ANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQ------RAAGLGFTYNVGALGGALAP 419 (496)
T ss_pred ------------------cHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHH------hhcccchhhhhhhHHHHHHH
Confidence 122333333333333333445677788899999776 99999999999999999999
Q ss_pred HHHHHhhhcchhhHHHHHHHHHH
Q 016902 247 TLVVYIQMEHGWGSAFGALAIAM 269 (380)
Q Consensus 247 ~i~~~i~~~~gw~~~f~i~~~~~ 269 (380)
.+.+++.+..||+..+.+.+++.
T Consensus 420 ~l~g~l~~~~g~~~~~~~~~~~~ 442 (496)
T PRK03893 420 ILGALIAQRLDLGTALASLSFSL 442 (496)
T ss_pred HHHHHHhccCChHHHHHHHHHHH
Confidence 99999999999988776554443
No 100
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.40 E-value=1.7e-11 Score=118.29 Aligned_cols=194 Identities=13% Similarity=0.086 Sum_probs=152.0
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHH
Q 016902 65 TGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTT 144 (380)
Q Consensus 65 ~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~ 144 (380)
+..+|+++...+.... .+..+.+.+.+..++.+++|+|..+.++++.+..+...+.-++-|++.||+ |-|++..++.+
T Consensus 10 ~~~~~~L~~S~~af~v-~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drf-GgR~~~~~s~~ 87 (417)
T COG2223 10 RIARRNLWLSTLAFDV-GFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRF-GGRKWTILSML 87 (417)
T ss_pred cchhHHHHHHHHHHHH-HHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhccc-CchHHHHHHHH
Confidence 4455666655544444 444455667788899999999999999999999999999999999999998 99999999988
Q ss_pred HHHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhh
Q 016902 145 IYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYK 224 (380)
Q Consensus 145 l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~ 224 (380)
+.++-.+.++++... .+.+.+++..++.|++ |+..+...++.+..||+++
T Consensus 88 l~~IP~~~~~~a~~~-------------------------~~~~~ll~~gll~G~~-GasFav~m~~~s~~fP~~~---- 137 (417)
T COG2223 88 LLLIPCLGLAFAVTY-------------------------PSTWQLLVIGLLLGLA-GASFAVGMPNASFFFPKEK---- 137 (417)
T ss_pred HHHHHHHHHHHHccC-------------------------CchHHHHHHHHHHhcc-cceehcccccccccCChhh----
Confidence 888888887776321 2335677777788888 4556777888999999888
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcch---hhHHHHHHHHHHHHHHHHHHhhcccccccCCCCCcc
Q 016902 225 THLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHG---WGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPL 293 (380)
Q Consensus 225 ~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~~~g---w~~~f~i~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 293 (380)
++.+.+++- ..|+|..+...++.++....| |+....+..+.++++.+.+++..+.-...++..++.
T Consensus 138 --qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~ 206 (417)
T COG2223 138 --QGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQ 206 (417)
T ss_pred --hhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhcccccc
Confidence 999999998 899999999999998888888 999988888888888887777665443333333333
No 101
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.39 E-value=7.7e-11 Score=116.41 Aligned_cols=167 Identities=15% Similarity=0.122 Sum_probs=124.6
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhh----cchhH-HHHHHHHHHHHH
Q 016902 75 FGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAY----LGRYW-TIAIFTTIYLAG 149 (380)
Q Consensus 75 ~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~----~GR~~-~i~i~~~l~~lg 149 (380)
+...+.+.+.+.-....++.|+++ .|++..+.+.+..+... .+..+++|+++||+ +|||| .++++.++..++
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~l~~-~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~ 81 (402)
T PRK11902 5 LLLGFASGLPLALTSGTLQAWMTV-EGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAAS 81 (402)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHH
Confidence 344555555555566678888875 59999999988655554 57889999999997 27776 677777777666
Q ss_pred HHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhh
Q 016902 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (380)
Q Consensus 150 ~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~ 229 (380)
+..+.+.. +. .+...+++..++.+++.+...+...++.+|.+|+++ |++
T Consensus 82 ~~~l~~~~------~~-------------------~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~------r~~ 130 (402)
T PRK11902 82 IAAMAFCP------PH-------------------AALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEE------RGA 130 (402)
T ss_pred HHHHHhcC------cc-------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhh------hhH
Confidence 66655420 00 245555555566777778888999999999999877 999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhc-chhhHHHHHHHHHHHHHHHH
Q 016902 230 FFNFFYLSVTVGAIVAFTLVVYIQME-HGWGSAFGALAIAMGISNML 275 (380)
Q Consensus 230 ~~~~~~~~~~iG~~i~~~i~~~i~~~-~gw~~~f~i~~~~~~~~~i~ 275 (380)
+.++...+..+|..+++.++.++.+. .||+..|++.++..++..+.
T Consensus 131 ~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l~ 177 (402)
T PRK11902 131 GAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGALT 177 (402)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHHH
Confidence 99998888999999999888888775 59999999877766555443
No 102
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.38 E-value=6.8e-11 Score=113.51 Aligned_cols=159 Identities=16% Similarity=0.115 Sum_probs=128.5
Q ss_pred HHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCC
Q 016902 88 LSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQD 167 (380)
Q Consensus 88 i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~~~~ 167 (380)
....+.+.+++.|+++..+++++...+.+++.++++..|++.+|+ |+|+.++++..++.+|..++.-++.
T Consensus 31 l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~-gyk~gi~lgL~l~avg~~lF~pAa~--------- 100 (422)
T COG0738 31 LNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKL-GYKAGIVLGLLLYAVGAALFWPAAS--------- 100 (422)
T ss_pred cchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHh-hhHHHHHHHHHHHHHHHHHHhhhhh---------
Confidence 444578899999999999999999999999999999999999998 9999999999999999988864432
Q ss_pred cccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHH
Q 016902 168 NCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFT 247 (380)
Q Consensus 168 ~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~ 247 (380)
......+++++++++.|.+..+....+|+..+.+++. -..-.|..+....+|+.++|.
T Consensus 101 ----------------~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~------a~~rlnl~q~fn~lGa~~gp~ 158 (422)
T COG0738 101 ----------------SKSYGFFLVALFILASGIGLLETAANPYVTLLGKPES------AAFRLNLAQAFNGLGAILGPL 158 (422)
T ss_pred ----------------hhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchh------HHHHHHHHHHhhhhHHHHHHH
Confidence 1467889999999999999999999999999999765 445566667777888888988
Q ss_pred HHHHhhhc-------------------chhhHHHHHHHHHHHHHHHHHHh
Q 016902 248 LVVYIQME-------------------HGWGSAFGALAIAMGISNMLFFI 278 (380)
Q Consensus 248 i~~~i~~~-------------------~gw~~~f~i~~~~~~~~~i~~~~ 278 (380)
+++++..+ ..|++.|.+.+....+..+.+..
T Consensus 159 ~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~ 208 (422)
T COG0738 159 LGSSLILSGVALTMSAAQILAIKGADASSVQFPYLILAGLLVLLAVLILL 208 (422)
T ss_pred HHHHHHHhhhhhccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHh
Confidence 88876551 13677776655554444443333
No 103
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.38 E-value=4.8e-11 Score=115.45 Aligned_cols=180 Identities=12% Similarity=0.000 Sum_probs=128.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHH-HHHHHHHHH
Q 016902 69 IAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWT-IAIFTTIYL 147 (380)
Q Consensus 69 ~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~-i~i~~~l~~ 147 (380)
+..+...+..++.....+.+..+++.|+.+.+|.+..+++.+.....++..++.+++|+++||+ |||+. +........
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~ 293 (399)
T TIGR00893 215 RRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLL-LRRGKSLVFARKTAI 293 (399)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHH-hhcccchhHHHHHHH
Confidence 3456666677777778888888899999999999999999999999999999999999999998 98862 111111222
Q ss_pred HHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhh
Q 016902 148 AGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHL 227 (380)
Q Consensus 148 lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r 227 (380)
++.++..+........ .... ..+...+.+.+..+..+...++.+|.+|++. |
T Consensus 294 ~~~~~~~~~~~~~~~~---------------------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~ 345 (399)
T TIGR00893 294 IAGLVLSLLMFATNYV---------------------NIPY-AALALVALGFFGLGAGAIGWALISDNAPGNI------A 345 (399)
T ss_pred HHHHHHHHHHHHhccc---------------------hhHH-HHHHHHHHHHhchhhhhHHHHHHHhhcChhH------H
Confidence 2211111110000000 1122 2333333334434478889999999999887 9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhcch-hhHHHHHHHHHHHHHHHHHH
Q 016902 228 DRFFNFFYLSVTVGAIVAFTLVVYIQMEHG-WGSAFGALAIAMGISNMLFF 277 (380)
Q Consensus 228 ~~~~~~~~~~~~iG~~i~~~i~~~i~~~~g-w~~~f~i~~~~~~~~~i~~~ 277 (380)
++.+++++...++|..+++.+.+++.+..| |.+.|++.+++.+++.++.+
T Consensus 346 g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 346 GLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSYL 396 (399)
T ss_pred HHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999888 99999887777766655543
No 104
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.38 E-value=2.2e-11 Score=119.08 Aligned_cols=165 Identities=13% Similarity=0.058 Sum_probs=124.4
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHH
Q 016902 66 GGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTI 145 (380)
Q Consensus 66 ~~~~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l 145 (380)
..|......+...++..+..+++..+++.|+.+++|++..+.+.+.....++..++.++.|+++||+ |||+.+.++.++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~ 313 (405)
T TIGR00891 235 KRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWL-GRRKAYVCSLLA 313 (405)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchhhhHHHHHH
Confidence 3344444444444444555556777889999999999999999999999999999999999999997 999998887765
Q ss_pred HHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhh
Q 016902 146 YLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKT 225 (380)
Q Consensus 146 ~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~ 225 (380)
..+..+.+... . .+...+.++.++.+++.++..+...++..|.+|++.
T Consensus 314 ~~~~~~~~~~~-------~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 361 (405)
T TIGR00891 314 GQLLIIPVFAI-------G--------------------ANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQ----- 361 (405)
T ss_pred HHHHHHHHHHh-------C--------------------CchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcch-----
Confidence 53322222111 0 123445555566666666777788889999999877
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHhhhcch-hhHHHHH
Q 016902 226 HLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHG-WGSAFGA 264 (380)
Q Consensus 226 ~r~~~~~~~~~~~~iG~~i~~~i~~~i~~~~g-w~~~f~i 264 (380)
|++.+++++...++|..++|.+.+++.+..| |...+..
T Consensus 362 -~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 362 -RAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred -hHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHh
Confidence 9999999999999999999999999999888 8766654
No 105
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.38 E-value=6.9e-11 Score=116.51 Aligned_cols=175 Identities=15% Similarity=0.068 Sum_probs=131.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHH
Q 016902 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (380)
Q Consensus 71 ~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~ 150 (380)
.+.+.+..++..+.++++..+++.|+.+ +|++..+++...+.+.++..++.+++|+++||+ ||++.+.++..+..++.
T Consensus 207 ~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~-~~~~~~~~~~~l~~~~~ 284 (393)
T PRK09705 207 AWTLGVYFGLINGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARHQ-DRRKLLMLALVLQLVGF 284 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhc-cchHHHHHHHHHHHHHH
Confidence 4444455556667778888899999975 899999999999999999999999999999997 99999988877777776
Q ss_pred HHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhH
Q 016902 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (380)
Q Consensus 151 ~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~ 230 (380)
+++... + .+...++ .++.+++.++..+.......+.+++++ .+++.
T Consensus 285 ~~~~~~-------~--------------------~~~~~~~--~~l~g~g~g~~~~~~~~~~~~~~~~~~-----~~g~~ 330 (393)
T PRK09705 285 CGFIWL-------P--------------------LQLPVLW--AMVCGLGLGGAFPLCLLLALDHSVQPA-----IAGKL 330 (393)
T ss_pred HHHHHc-------c--------------------chHHHHH--HHHHHHhccchHHHHHHHHHhhcCCHH-----HHHHH
Confidence 654432 0 1111122 235677777777777777778876321 28999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcch-hhHHHHHHHHHHHHHHHHHHhhcc
Q 016902 231 FNFFYLSVTVGAIVAFTLVVYIQMEHG-WGSAFGALAIAMGISNMLFFIGTP 281 (380)
Q Consensus 231 ~~~~~~~~~iG~~i~~~i~~~i~~~~g-w~~~f~i~~~~~~~~~i~~~~~~~ 281 (380)
+++.+...++++.++|.+.+++.+..| |...|.+.+++.++.+++.+...+
T Consensus 331 ~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (393)
T PRK09705 331 VAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAP 382 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999876 788888877776666555544433
No 106
>PRK15075 citrate-proton symporter; Provisional
Probab=99.38 E-value=5.4e-11 Score=118.80 Aligned_cols=153 Identities=14% Similarity=0.066 Sum_probs=108.3
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHH-HH
Q 016902 75 FGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLT-GI 153 (380)
Q Consensus 75 ~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~-~l 153 (380)
+...++....++++..+++.|+++.+|++..+++.....+.++..++.+++|+++||+ |||++++++.++..+... .+
T Consensus 244 ~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~~~~~~~~~ 322 (434)
T PRK15075 244 MLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRI-GRRPVLIAFTVLAILTAYPAL 322 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHH
Confidence 3444455666777888899999988999988888887788888889999999999998 999988776544332221 11
Q ss_pred HhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHH
Q 016902 154 TLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNF 233 (380)
Q Consensus 154 ~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~ 233 (380)
..... . .....+.+..++.+++.+...+...++..|.+|++. |++++++
T Consensus 323 ~~~~~------~-------------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~------rg~~~g~ 371 (434)
T PRK15075 323 SWLVA------A-------------------PSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEV------RTAGFSL 371 (434)
T ss_pred HHHHc------C-------------------CchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCc------cchheeH
Confidence 11100 0 112223334445556666666666788899999887 8999998
Q ss_pred -HHHHHHHHHHHHHHHHHHhhhcchhh
Q 016902 234 -FYLSVTVGAIVAFTLVVYIQMEHGWG 259 (380)
Q Consensus 234 -~~~~~~iG~~i~~~i~~~i~~~~gw~ 259 (380)
+.++..+++.++|.+.+++.+..|+.
T Consensus 372 ~~~~~~~~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 372 AYSLATAIFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHhcCCc
Confidence 45555566788999999999888753
No 107
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.37 E-value=5e-11 Score=118.17 Aligned_cols=160 Identities=12% Similarity=-0.021 Sum_probs=127.1
Q ss_pred HHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCC
Q 016902 85 YFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMP 164 (380)
Q Consensus 85 ~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~ 164 (380)
.+++..+++.|+.+.+|++....+.+.+.+.++..++.+++++++|+. ++++.+.++.++..++.+++.+.
T Consensus 239 ~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~-~~~~~l~~~~~~~~~~~~~~~~~-------- 309 (417)
T PRK10489 239 ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSA-RPGLLMLLSTLGSFLAVGLFGLM-------- 309 (417)
T ss_pred HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhcc-CcchHHHHHHHHHHHHHHHHHcc--------
Confidence 345666788899888999999999998999999999999999999986 77888888877777776655442
Q ss_pred CCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHH
Q 016902 165 NQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIV 244 (380)
Q Consensus 165 ~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i 244 (380)
.+...++++.++.|++.+...+...++..|.+|++. |++.+++++....+|..+
T Consensus 310 --------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~~~~~~g~~~ 363 (417)
T PRK10489 310 --------------------PMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEM------LGRINGLWTAQNVTGDAI 363 (417)
T ss_pred --------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHH------HHHHHHHHHHHHhhhHhH
Confidence 234455666777888887777777888999999777 999999999999999999
Q ss_pred HHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHHhh
Q 016902 245 AFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIG 279 (380)
Q Consensus 245 ~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~~~~~ 279 (380)
++.+.+++.+..|+...+++.+++..+..++....
T Consensus 364 g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 398 (417)
T PRK10489 364 GAALLGGLGAMMTPVASASASGFGLLIIGVLLLLV 398 (417)
T ss_pred HHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHh
Confidence 99999999998898888876666555444444333
No 108
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.37 E-value=6.6e-12 Score=103.50 Aligned_cols=131 Identities=20% Similarity=0.232 Sum_probs=108.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHH
Q 016902 113 NFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYT 192 (380)
Q Consensus 113 ~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~ 192 (380)
.+..+..++.++.|+++||+ |||+.+.++..+..++.+++... .+...+++
T Consensus 6 ~~~~~~~~~~~~~g~~~d~~-g~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~ 56 (141)
T TIGR00880 6 GYALGQLIYSPLSGLLTDRF-GRKPVLLVGLFIFVLSTAMFALS----------------------------SNITVLII 56 (141)
T ss_pred eehhHHHHHHhhHHHHHhhc-chhHHHHHHHHHHHHHHHHHHHh----------------------------ccHHHHHH
Confidence 34566777889999999997 99999999988888877766543 23556777
Q ss_pred HHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHH
Q 016902 193 VLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGIS 272 (380)
Q Consensus 193 ~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~ 272 (380)
.+++.+++.+...+....+..|.+|++. |++..++++....+|..+++.+.+++.+..+|++.|++..+...++
T Consensus 57 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (141)
T TIGR00880 57 ARFLQGFGAAFALVAGAALIADIYPPEE------RGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAA 130 (141)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHCChhh------hhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHH
Confidence 7888999999888999999999999877 9999999999999999999999999988889999998877766665
Q ss_pred HHHHHh
Q 016902 273 NMLFFI 278 (380)
Q Consensus 273 ~i~~~~ 278 (380)
.+....
T Consensus 131 ~~~~~~ 136 (141)
T TIGR00880 131 FILLAF 136 (141)
T ss_pred HHHHhh
Confidence 554443
No 109
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.36 E-value=4.7e-11 Score=118.79 Aligned_cols=172 Identities=10% Similarity=0.039 Sum_probs=127.6
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHhcCCC--------HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHH
Q 016902 77 NEMAERMAYFGLSVNMVTFMFYVMHKS--------FADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLA 148 (380)
Q Consensus 77 ~~~~~~~~~~~i~~~l~~yl~~~~~~s--------~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~l 148 (380)
..++..........+++.|+.+ .|.+ ....+...++..+...++.++.|+++||+ |||+++.++.++..+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~-g~r~~l~~~~~~~~v 293 (418)
T TIGR00889 216 FSMLLGAPLQITNIFGNGFLHE-FGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRF-GIKKVMLLSLVAWAL 293 (418)
T ss_pred HHHHHHhHHHHHHHhHHHHHHH-hcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHH
Confidence 3333333333444566777754 4543 34567788888888888899999999998 999999999998888
Q ss_pred HHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhh
Q 016902 149 GLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLD 228 (380)
Q Consensus 149 g~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~ 228 (380)
+..++..... . ......+++..++.+++.+...++...+++|.+|++. |+
T Consensus 294 ~~~l~~~~~~------~------------------~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~------~g 343 (418)
T TIGR00889 294 RFGFFAYGDP------E------------------YFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHI------RA 343 (418)
T ss_pred HHHHHHHcCc------c------------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH------HH
Confidence 7666654210 0 0124456677788899888888888999999999877 99
Q ss_pred hHHHHHH-HHHHHHHHHHHHHHHHhhhc------chhhHHHHHHHHHHHHHHHHHHhhc
Q 016902 229 RFFNFFY-LSVTVGAIVAFTLVVYIQME------HGWGSAFGALAIAMGISNMLFFIGT 280 (380)
Q Consensus 229 ~~~~~~~-~~~~iG~~i~~~i~~~i~~~------~gw~~~f~i~~~~~~~~~i~~~~~~ 280 (380)
+.+++++ ....+|..++|.+++++.+. .||++.|.+.+++.+++.++++...
T Consensus 344 ~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~ 402 (418)
T TIGR00889 344 SAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFF 402 (418)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999986 56789999999999999886 4699999888777666655554443
No 110
>PRK03545 putative arabinose transporter; Provisional
Probab=99.36 E-value=1.5e-10 Score=113.73 Aligned_cols=169 Identities=15% Similarity=-0.044 Sum_probs=124.9
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHH
Q 016902 75 FGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGIT 154 (380)
Q Consensus 75 ~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~ 154 (380)
.+..++.....++..++++.|+.+.+|++...++.+...+.++..++.++.|+++||+ ||++. .++..+..++..++.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~-~~~~~~~~~~~~~l~ 288 (390)
T PRK03545 211 YLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRH-PSGFL-LIAIALLLVCLLLLL 288 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhcc-chhHH-HHHHHHHHHHHHHHH
Confidence 3334444455555667778888888999999999998889999999999999999997 98764 444444433333322
Q ss_pred hhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHH
Q 016902 155 LCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFF 234 (380)
Q Consensus 155 l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~ 234 (380)
... .+...+++..++.|++.++..+.....+.+..| +. ++++++++
T Consensus 289 ~~~---------------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~------~~~~~g~~ 334 (390)
T PRK03545 289 PAA---------------------------NSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DA------TDVAMALF 334 (390)
T ss_pred HHh---------------------------chHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-Cc------HHHHHHHH
Confidence 210 234455666677788877766666777777665 34 78889998
Q ss_pred HHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHHhh
Q 016902 235 YLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIG 279 (380)
Q Consensus 235 ~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~~~~~ 279 (380)
+....+|..+|+.+++++.+..|++..|++.+++.++++++....
T Consensus 335 ~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 379 (390)
T PRK03545 335 SGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILI 379 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHH
Confidence 888999999999999999999999999998888877777665443
No 111
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.36 E-value=2.3e-11 Score=120.80 Aligned_cols=155 Identities=12% Similarity=0.097 Sum_probs=121.0
Q ss_pred HHHhHHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCC
Q 016902 88 LSVNMVTFMFYVM---HKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMP 164 (380)
Q Consensus 88 i~~~l~~yl~~~~---~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~ 164 (380)
....++.|+.+.+ +.+....+.+.++..+...++.+++|+++||+ |||+.+.++.++..++.+++.++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~l~~~~~~l~~~~-------- 312 (420)
T PRK09528 242 FDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRI-GAKNALLLAGTIMAVRIIGSGFA-------- 312 (420)
T ss_pred HHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcchhhHHHHHHHHHHHHHHHhc--------
Confidence 4445667766543 55666777888888888889999999999998 99999999888888877776653
Q ss_pred CCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHH-HHHHHHHHHH
Q 016902 165 NQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNF-FYLSVTVGAI 243 (380)
Q Consensus 165 ~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~-~~~~~~iG~~ 243 (380)
.+...+++...+.+++.+...+....++.+.+|++. +++.+++ +++...+|..
T Consensus 313 --------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~a~~~~~~~~~~~~lg~~ 366 (420)
T PRK09528 313 --------------------TGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRL------SATIYLVGFQFAKQLGAV 366 (420)
T ss_pred --------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc------eeeeeeehHHHHHHHHHH
Confidence 234556667778888887777788889999999776 7776665 6778889999
Q ss_pred HHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHH
Q 016902 244 VAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFF 277 (380)
Q Consensus 244 i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~~~ 277 (380)
+++.+.+++.+..||+..|.+.+++.++..++.+
T Consensus 367 ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~ 400 (420)
T PRK09528 367 FLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISV 400 (420)
T ss_pred HHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999987776665554443
No 112
>PRK12382 putative transporter; Provisional
Probab=99.35 E-value=7.2e-11 Score=115.94 Aligned_cols=160 Identities=14% Similarity=0.100 Sum_probs=124.5
Q ss_pred HHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcc
Q 016902 81 ERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMK 160 (380)
Q Consensus 81 ~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~ 160 (380)
..+.+..+..+.+.|+.+ .|++. .+.....+.++..++.++.|++.||+ ||++.+.++..+..++.+++.+.
T Consensus 228 ~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~---- 299 (392)
T PRK12382 228 QGVGFAVIGTFVSLYFAS-KGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRF-GGVKVAIVSLLVETVGLLLLWLA---- 299 (392)
T ss_pred HHHHHhHHHHHHHHHHHh-cCCch--hHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeehHHHHHHHHHHHHHHHHc----
Confidence 334455555666777754 56653 44555666777788889999999997 99999998888888777665542
Q ss_pred cCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHH
Q 016902 161 VFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTV 240 (380)
Q Consensus 161 ~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~i 240 (380)
.+...++++.++.+++.+...+.......|.++++. |++.+++++....+
T Consensus 300 ------------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~~~~ 349 (392)
T PRK12382 300 ------------------------PTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQV------RGTALGGYAAFQDI 349 (392)
T ss_pred ------------------------ccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHH
Confidence 134455667778888888878888888889998777 99999999999999
Q ss_pred HHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHHh
Q 016902 241 GAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (380)
Q Consensus 241 G~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~~~~ 278 (380)
|..+++.+.+++.+..||++.|.+.+++.+++.++.+.
T Consensus 350 g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 387 (392)
T PRK12382 350 AYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTIL 387 (392)
T ss_pred HHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999888877777666544
No 113
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.35 E-value=1.2e-10 Score=114.37 Aligned_cols=159 Identities=7% Similarity=-0.075 Sum_probs=112.8
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHH-HHHHHHH
Q 016902 74 IFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTI-YLAGLTG 152 (380)
Q Consensus 74 i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l-~~lg~~~ 152 (380)
+.+..++..+++......++.|+ +++|++..+.+.+.+.+.++..+++++.|+++||+ ||+........+ ..+..+.
T Consensus 9 l~~~~~~~~~~~~~~~p~l~~~l-~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~l~~~~ 86 (382)
T TIGR00902 9 LALGFFGYFCAYGIFLPFFPAWL-KGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDA-NHIIIALRLLALASAIFAAA 86 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHHHH
Confidence 33444444444444556677777 47899999999999999999999999999999998 985433211111 1111111
Q ss_pred HH-hhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHH
Q 016902 153 IT-LCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFF 231 (380)
Q Consensus 153 l~-l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~ 231 (380)
+. .+ .+...+++.+.+.+.+.+...+...++..+ +. ++ |+..+
T Consensus 87 ~~~~~----------------------------~~~~~l~~~~~l~~~~~~~~~p~~~al~~~-~~-~~------~~~~~ 130 (382)
T TIGR00902 87 FSAGA----------------------------HNAWLLFIAIGLFALFFSAGMPIGDALANT-WQ-KQ------FGLDY 130 (382)
T ss_pred HHHhh----------------------------hhHHHHHHHHHHHHHHHccchhHHHHHHHH-HH-HH------cCCCc
Confidence 11 11 346777788888888888877777776543 22 22 67788
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHH
Q 016902 232 NFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMG 270 (380)
Q Consensus 232 ~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~ 270 (380)
+......++|..+++.+++++.+..||+..|++.+++..
T Consensus 131 g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~ 169 (382)
T TIGR00902 131 GKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAGLA 169 (382)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHH
Confidence 888888999999999999999999999999987665533
No 114
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.34 E-value=2.1e-10 Score=113.40 Aligned_cols=175 Identities=14% Similarity=0.051 Sum_probs=125.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHH-HHHHHHHH
Q 016902 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAI-FTTIYLAG 149 (380)
Q Consensus 71 ~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i-~~~l~~lg 149 (380)
.+...+..++....+++..++++.|++ ++|++..+++.+...+.++..++.++.|+++||+ |||+.+.. +.+...++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~l~~~~~ 301 (402)
T TIGR00897 224 VLLGGMVRIINTIGLFGFAVFLPMFVA-ELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKL-GWMNTVRWFGGVGCGIF 301 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhh-cchhHHHHHHHHHHHHH
Confidence 455555666777788888888998885 5899999988888888899999999999999997 98887642 22223332
Q ss_pred HHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhh
Q 016902 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (380)
Q Consensus 150 ~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~ 229 (380)
.+.+..... ... .+...+++..++.|++.++..+ ......|..| ++ |++
T Consensus 302 ~~~l~~~~~---~~~--------------------~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~-~~------~g~ 350 (402)
T TIGR00897 302 TLALYYIPQ---HFG--------------------HSFAVALIIAIALGIFLAGYVP-LAAVFPTLAP-KH------KGA 350 (402)
T ss_pred HHHHHHHHH---ccC--------------------CcHHHHHHHHHHHHHHHHHHHH-HHHHHHhhCc-ch------hHH
Confidence 222222100 000 1344455566677777776544 3455566544 34 899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHHh
Q 016902 230 FFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (380)
Q Consensus 230 ~~~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~~~~ 278 (380)
.+++++....+|..++|.+.+++.+..||...|++.+++.+++.++..+
T Consensus 351 ~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~ 399 (402)
T TIGR00897 351 AMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTAF 399 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999888877766655443
No 115
>PTZ00207 hypothetical protein; Provisional
Probab=99.34 E-value=2.1e-10 Score=117.80 Aligned_cols=173 Identities=9% Similarity=-0.017 Sum_probs=124.5
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHH
Q 016902 65 TGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTT 144 (380)
Q Consensus 65 ~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~ 144 (380)
.++|..+...+....+... .|++. .....+.+++|++..+.+++.++.... .++.+++|+++|++ |||++++++.+
T Consensus 24 ~~Rw~~lva~~~~~~~~g~-~y~fs-v~s~~L~~~lgls~~~l~~i~svg~~~-g~~~lp~G~L~Dr~-G~R~vllig~l 99 (591)
T PTZ00207 24 PRRFALLVLGAFCSICTSF-MYAFN-LISGAMQARYNLTQRDLSTITTVGIAV-GYFLLPYSFIYDYL-GPRPIFVLSMT 99 (591)
T ss_pred cchHHHHHHHHHHHHHHHH-HHHHH-HHHHHHHHHhCcCHHHHHHHHHHHHHH-HHHHHHHHHHHHHh-CcHHHHHHHHH
Confidence 4566655544444444333 33343 345578999999999988887764433 34566789999998 99999999999
Q ss_pred HHHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhh
Q 016902 145 IYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYK 224 (380)
Q Consensus 145 l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~ 224 (380)
++.+|.++++++... ... .+...+++.+++.|+|.+...+.....+.+.|| ++
T Consensus 100 l~~iG~ll~ala~~~--~i~--------------------~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~---- 152 (591)
T PTZ00207 100 VFCLGTLLFALTFQE--VIE--------------------GSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SN---- 152 (591)
T ss_pred HHHHHHHHHHHHhcc--ccc--------------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hh----
Confidence 999999988875210 000 257778889999999998888888888999997 44
Q ss_pred hhhhhHHHHHHHHHHHHHHH-HHHHHHHhhhcchhhHHHHHHHHHHHHH
Q 016902 225 THLDRFFNFFYLSVTVGAIV-AFTLVVYIQMEHGWGSAFGALAIAMGIS 272 (380)
Q Consensus 225 ~~r~~~~~~~~~~~~iG~~i-~~~i~~~i~~~~gw~~~f~i~~~~~~~~ 272 (380)
|+...+++.....+|+.+ +++..+++.+ +|++.|++.+++.++.
T Consensus 153 --RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~--~~~~~fl~l~vl~~vv 197 (591)
T PTZ00207 153 --RGAVVAIMKTFTGLGSAILGSIQLAFFSD--NTSAYFFFLMSFALVV 197 (591)
T ss_pred --hHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hHHHHHHHHHHHHHHH
Confidence 899999999999999875 5555555543 5666666655554443
No 116
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.34 E-value=1.5e-10 Score=113.41 Aligned_cols=153 Identities=16% Similarity=0.138 Sum_probs=117.4
Q ss_pred HHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCC
Q 016902 84 AYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFM 163 (380)
Q Consensus 84 ~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~ 163 (380)
.+....++++.|+++ .|.+....+...+...++..++.++.|+++||+ ||++.+.++.++..++.+.+. .
T Consensus 215 ~~~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-~~~~~l~~~~~~~~~~~~~~~-~------- 284 (381)
T PRK03633 215 VLGSLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRF-GRLLVLRVQVFVVILGSIAML-S------- 284 (381)
T ss_pred HHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHc-CcHHHHHHHHHHHHHHHHHHh-h-------
Confidence 333445567788864 699988888888888899999999999999998 999998888777776654432 1
Q ss_pred CCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHH
Q 016902 164 PNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAI 243 (380)
Q Consensus 164 ~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~ 243 (380)
...++..+++.+++.++..+...+...|..|+++ ++...+.++...++|..
T Consensus 285 -----------------------~~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~------~~~~~~~~~~~~~lG~~ 335 (381)
T PRK03633 285 -----------------------QAAMAPALFILGAAGFTLYPVAMAWACEKVEHHE------LVAMNQALLLSYTVGSL 335 (381)
T ss_pred -----------------------hHHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHH------HHHHHHHHHHHHHHHHH
Confidence 0112344556676666777888888889887655 67777777888899999
Q ss_pred HHHHHHHHhhhcchhhHHHHHHHHHHHHHHHH
Q 016902 244 VAFTLVVYIQMEHGWGSAFGALAIAMGISNML 275 (380)
Q Consensus 244 i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~ 275 (380)
++|.+.+++.++.||++.|.+.+++.++..+.
T Consensus 336 igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~ 367 (381)
T PRK03633 336 LGPSFTAMLMQNYSDNLLFIMIASVSFIYLLM 367 (381)
T ss_pred HHHHHHHHHHHHhCccHHHHHHHHHHHHHHHH
Confidence 99999999999999999999877776655433
No 117
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.34 E-value=1.7e-10 Score=115.95 Aligned_cols=197 Identities=12% Similarity=0.064 Sum_probs=134.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh----hcchhHHHHHH-HHH
Q 016902 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADA----YLGRYWTIAIF-TTI 145 (380)
Q Consensus 71 ~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~----~~GR~~~i~i~-~~l 145 (380)
++.+....+...+++....++++.|+ +.+|.+....+.+..+..+...+..++.|++||| + |||+.++++ .+.
T Consensus 6 li~~~~~~~Giq~~~~l~~~~l~~yl-~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~-GRRrp~il~g~~~ 83 (477)
T TIGR01301 6 LLRVASVAAGVQFGWALQLSLLTPYV-QELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRF-GRRRPFIAAGAAL 83 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCC-CChHHHHHHHHHH
Confidence 45555556666666655666666665 6799999999999999999999999999999995 6 999998875 445
Q ss_pred HHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhh
Q 016902 146 YLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKT 225 (380)
Q Consensus 146 ~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~ 225 (380)
..++++++..+..+..+... . ............+.++..+..++.....++..++++|++|+++.+
T Consensus 84 ~~~~l~ll~~~~~~~~~~~~----------~-~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~--- 149 (477)
T TIGR01301 84 VAFAVILIGFAADIGHLFGD----------N-LDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARR--- 149 (477)
T ss_pred HHHHHHHHHhCchhhhhccc----------c-ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHH---
Confidence 55555555543211100000 0 000000011234455566667788888888999999999977511
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHh--hhc-------------chhhHHHHHHHHHHHHHHHHHHhhccccc
Q 016902 226 HLDRFFNFFYLSVTVGAIVAFTLVVYI--QME-------------HGWGSAFGALAIAMGISNMLFFIGTPLYR 284 (380)
Q Consensus 226 ~r~~~~~~~~~~~~iG~~i~~~i~~~i--~~~-------------~gw~~~f~i~~~~~~~~~i~~~~~~~~~~ 284 (380)
++.++++..+..++|+.+++.++++. .+. .+.++.|++.+++++++.++.++..+++.
T Consensus 150 -~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~ 222 (477)
T TIGR01301 150 -TRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENP 222 (477)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccC
Confidence 36788899999999999999988765 111 15688899988888887777666655543
No 118
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.33 E-value=2.2e-10 Score=114.32 Aligned_cols=169 Identities=11% Similarity=0.034 Sum_probs=107.4
Q ss_pred HHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhh
Q 016902 78 EMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCA 157 (380)
Q Consensus 78 ~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~ 157 (380)
.++....+|++.++++.|+.+.+|++..+++...++...+..++.++.|+++||+ |||+++.++.++..+..+++....
T Consensus 252 ~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~~~~~~~ 330 (432)
T PRK10406 252 TAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKI-GRRTSMLCFGSLAALFTVPILSAL 330 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHHHHHHHHHH
Confidence 3344677888889999999999999988888877777777778888899999997 999988776655433332221110
Q ss_pred hcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHH-
Q 016902 158 TMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYL- 236 (380)
Q Consensus 158 ~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~- 236 (380)
. .. .+....+....+..++.+...+....+.+|.||++. |++++++.+.
T Consensus 331 ~-----~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~------r~t~~g~~~~~ 380 (432)
T PRK10406 331 Q-----NV-------------------SSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQV------RALGVGLSYAV 380 (432)
T ss_pred H-----cC-------------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCc------cchhhhHHHHH
Confidence 0 00 111111111222222333334556778899999988 9999999554
Q ss_pred HHHHHHHHHHHHHHHhhhcch-hhHHHHHHHHHHHHHHHHHHh
Q 016902 237 SVTVGAIVAFTLVVYIQMEHG-WGSAFGALAIAMGISNMLFFI 278 (380)
Q Consensus 237 ~~~iG~~i~~~i~~~i~~~~g-w~~~f~i~~~~~~~~~i~~~~ 278 (380)
+..+++.++|.+.+++.. .| |...+++.+++.+++++..++
T Consensus 381 g~~~~g~~~p~~~~~l~~-~g~~~~~~~~~~~~~~i~~~~~~~ 422 (432)
T PRK10406 381 ANALFGGSAEYVALSLKS-IGMETAFFWYVTLMAVVAFLVSLM 422 (432)
T ss_pred HHHHHHhHHHHHHHHHHH-hCCCcHHHHHHHHHHHHHHHHHHH
Confidence 444445567777776643 45 555565555555555544433
No 119
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.33 E-value=2.9e-10 Score=111.60 Aligned_cols=169 Identities=9% Similarity=-0.076 Sum_probs=137.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHH
Q 016902 69 IAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLA 148 (380)
Q Consensus 69 ~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~l 148 (380)
+..+..++..++...+.+.+.++.+.|+++ +|.+....+.......+...++.++.+.+.||+ |+++.+.++.++..+
T Consensus 205 ~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~-g~~~~l~~~~~~~~~ 282 (382)
T TIGR00902 205 PMNLRFLAAVCLIQGAHAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQNC-SARDLLLISAIACVG 282 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhC-CHHHHHHHHHHHHHH
Confidence 345555566666667777778888999964 899999999888888888888889999999998 999999999999998
Q ss_pred HHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhh
Q 016902 149 GLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLD 228 (380)
Q Consensus 149 g~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~ 228 (380)
+.+++... .+...+++...+.|+..|...+....++.+. |+++ ++
T Consensus 283 ~~~~~~~~----------------------------~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~------~~ 327 (382)
T TIGR00902 283 RWAIIGAI----------------------------EAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSE------IA 327 (382)
T ss_pred HHHHHHhH----------------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhh------HH
Confidence 88777653 3566777788999999999999999999987 7666 78
Q ss_pred hHHHHHH-HHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHH
Q 016902 229 RFFNFFY-LSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNML 275 (380)
Q Consensus 229 ~~~~~~~-~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~ 275 (380)
++.+.|+ .+..+|..+++.++|++.+..|+ ..|++.+++.++++++
T Consensus 328 ~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 328 KLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 8888876 46779999999999999999886 5677766666655544
No 120
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.33 E-value=5.9e-12 Score=120.23 Aligned_cols=166 Identities=13% Similarity=0.074 Sum_probs=141.4
Q ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCcccccccccCC
Q 016902 99 VMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGS 178 (380)
Q Consensus 99 ~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~ 178 (380)
.++-++++.+++...+.....+..++.|.+.|++ |++-.++++.++..+.++++++.
T Consensus 100 ~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~i-Gy~ipm~~Gl~vmf~sTilFafg---------------------- 156 (464)
T KOG3764|consen 100 SLDRENTQIGLLFASKALVQLLVNPFFGNLIDRI-GYKIPMVAGLFVMFLSTILFAFG---------------------- 156 (464)
T ss_pred CccccccchhHHHHHHHHHHHHhcccchhhHHHh-ccccHHHHHHHHHHHHHHHHHHc----------------------
Confidence 3455677889999999999999999999999997 99999999999999999999885
Q ss_pred CCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcchh
Q 016902 179 CEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGW 258 (380)
Q Consensus 179 c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~~~gw 258 (380)
..+.+++++|.++|+|.++...+..+++||.|+++.. |++.++.......+|-++||.+++.+.+..|+
T Consensus 157 ------~sy~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~e-----r~~vmGialgfislG~lvgPpfGGilYe~~Gk 225 (464)
T KOG3764|consen 157 ------NSYPMLFVARSLQGVGSAFADTSGLAMLADVFPEDNE-----RGSVMGIALGFISLGVLVGPPFGGILYEFAGK 225 (464)
T ss_pred ------chhHHHHHHHHHhhhhHHHHHhhhHHHHHHHcccchh-----hhHHHHHHHHHHhccceecCCcccchHhhcCC
Confidence 3577899999999999999999999999999998762 89999998889999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHhhcccccc---cCCCCCccchHHH
Q 016902 259 GSAFGALAIAMGISNMLFFIGTPLYRH---RLPGGSPLTRVAQ 298 (380)
Q Consensus 259 ~~~f~i~~~~~~~~~i~~~~~~~~~~~---~~~~~~~~~~~~~ 298 (380)
..+|++.++++++..++.++..+.++. ..+++.|+.++.+
T Consensus 226 ~aPFlVL~~v~Lld~~L~l~vi~p~~~~~~~~~~~~~~~~Ll~ 268 (464)
T KOG3764|consen 226 SAPFLVLAIVLLLDGALQLLVIEPTEMDPDSTEQGTPMWSLLM 268 (464)
T ss_pred cCcHHHHHHHHHHHHHHHHheeCccccCccccccCccHHHHHh
Confidence 999999998888777765554444332 2455666666553
No 121
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.33 E-value=5.8e-11 Score=118.50 Aligned_cols=139 Identities=16% Similarity=0.114 Sum_probs=115.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhH
Q 016902 108 SNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQM 187 (380)
Q Consensus 108 ~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~ 187 (380)
+.+++++.++..+|..++|+++|++ |||.+++++.++.+++.+++.++... ...
T Consensus 63 S~~vs~f~iG~~~Gs~~~~~la~~~-GRK~~l~~~~~l~~~~~~~~~~s~~~-------------------------~~~ 116 (485)
T KOG0569|consen 63 SLIVSIFFIGGMIGSFSSGLLADRF-GRKNALLLSNLLAVLAALLMGLSKSA-------------------------PSF 116 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh-cchHHHHHHHHHHHHHHHHHHHHHHh-------------------------hhH
Confidence 5778889999999999999999998 99999999999998888888776321 357
Q ss_pred HHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHH-HHhh-hcchhhHHHHHH
Q 016902 188 LYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLV-VYIQ-MEHGWGSAFGAL 265 (380)
Q Consensus 188 ~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~-~~i~-~~~gw~~~f~i~ 265 (380)
.+++++|++.|+..|......+-|+.|..|.+- ||..-....++.++|.+++..++ ..+. ....|.+.+.++
T Consensus 117 e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~------RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~ 190 (485)
T KOG0569|consen 117 EMLILGRLIVGLACGLSTGLVPMYLTEISPKNL------RGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFP 190 (485)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhh------ccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHH
Confidence 789999999999999999999999999999888 99988888999999998885544 3343 444699998888
Q ss_pred HHHHHHHHHHHHh
Q 016902 266 AIAMGISNMLFFI 278 (380)
Q Consensus 266 ~~~~~~~~i~~~~ 278 (380)
.+..++.++++.+
T Consensus 191 ~i~~~~~l~~l~~ 203 (485)
T KOG0569|consen 191 LIPALLQLALLPF 203 (485)
T ss_pred HHHHHHHHHHHhc
Confidence 8877766666544
No 122
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.33 E-value=7.5e-11 Score=117.35 Aligned_cols=165 Identities=14% Similarity=0.020 Sum_probs=116.2
Q ss_pred hHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCccc
Q 016902 91 NMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCD 170 (380)
Q Consensus 91 ~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~~~~~c~ 170 (380)
+...++.+++|++...++.......++..++.+++|+++||+ |||+.+.++.++..++.+++.+...... ++
T Consensus 305 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~----- 376 (481)
T TIGR00879 305 YYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRF-GRRPLLLIGAAGMAICLFVLGILGASFV--TG----- 376 (481)
T ss_pred HHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHHHHhhccc--CC-----
Confidence 344555667899988888888888888999999999999997 9999999988877777666653211000 00
Q ss_pred ccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 016902 171 RISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVV 250 (380)
Q Consensus 171 ~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~~ 250 (380)
.. .......+....++.+....+..+....+.+|.+|++. |+...++.+...++|+.+++.+.+
T Consensus 377 ---------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~------~~~~~~~~~~~~~lg~~i~~~~~~ 440 (481)
T TIGR00879 377 ---------SS-KSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSL------RPKGISIAVAANWLANFIVGFLFP 440 (481)
T ss_pred ---------cc-cchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHH------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 00122222222222222222334666777799999877 999999999999999999999999
Q ss_pred HhhhcchhhHHHHHHHHHHHHHHHHHHhh
Q 016902 251 YIQMEHGWGSAFGALAIAMGISNMLFFIG 279 (380)
Q Consensus 251 ~i~~~~gw~~~f~i~~~~~~~~~i~~~~~ 279 (380)
++.++.+|.+.|++.+++.+++.++.+..
T Consensus 441 ~~~~~~~~~~~f~~~~~~~~~~~i~~~~~ 469 (481)
T TIGR00879 441 TMLESIGVGGVFIFFGGLNVLGLIFVYFF 469 (481)
T ss_pred HHHHhcCccceehhHHHHHHHHHHHHhee
Confidence 99988899999988777766666554443
No 123
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.32 E-value=2.6e-10 Score=114.98 Aligned_cols=184 Identities=13% Similarity=0.055 Sum_probs=144.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchh--HHHHHHHHH
Q 016902 68 WIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRY--WTIAIFTTI 145 (380)
Q Consensus 68 ~~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~--~~i~i~~~l 145 (380)
.|.+..-++..++-+-+...+.+....|.++++|++..+...+..+.++.+.++.+++|++.||+ |-| ++++++.++
T Consensus 280 ~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~-g~k~~~~l~~~l~~ 358 (477)
T PF11700_consen 280 LRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRF-GPKTKRTLLISLIL 358 (477)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHHHHHH
Confidence 34555566666776777777888899999999999999999999999999999999999999998 988 888777766
Q ss_pred HHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhh
Q 016902 146 YLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKT 225 (380)
Q Consensus 146 ~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~ 225 (380)
+.+-.+.-.+. ..+..... .+...+++.-++.|+..|+.++..-++.+++.|++.
T Consensus 359 ~~~i~~~g~~G-~~~~~~g~-------------------~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~----- 413 (477)
T PF11700_consen 359 WIIIPLYGLFG-FWPSFFGL-------------------KSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGR----- 413 (477)
T ss_pred HHHHHHHHHHH-hhhcccCc-------------------ccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCch-----
Confidence 53322221110 00000000 234557776778999999999999999999999877
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHhhhcch-hhHHHHHHHHHHHHHHHHHHh
Q 016902 226 HLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHG-WGSAFGALAIAMGISNMLFFI 278 (380)
Q Consensus 226 ~r~~~~~~~~~~~~iG~~i~~~i~~~i~~~~g-w~~~f~i~~~~~~~~~i~~~~ 278 (380)
.+.+|++|.+..-..+++||++.+.+.+..| -|+++....++.++++++++.
T Consensus 414 -e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~ 466 (477)
T PF11700_consen 414 -EAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFF 466 (477)
T ss_pred -hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhh
Confidence 8999999999999999999999999998876 788998888888777776644
No 124
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.32 E-value=8.2e-11 Score=117.00 Aligned_cols=176 Identities=15% Similarity=0.122 Sum_probs=123.9
Q ss_pred HHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---cchhH-HHHHHHHHHHHHHHHHH
Q 016902 79 MAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAY---LGRYW-TIAIFTTIYLAGLTGIT 154 (380)
Q Consensus 79 ~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~---~GR~~-~i~i~~~l~~lg~~~l~ 154 (380)
+...+....+..+++.|+++.+|++...++.+.++..+...+..++.|+++||. +|||| .++++.++..++.+++.
T Consensus 9 ~~~~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~ 88 (437)
T TIGR00792 9 FGNNFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLF 88 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHH
Confidence 344455555667889999999999999999999999999999999999999983 48865 56667777777766665
Q ss_pred hhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHH
Q 016902 155 LCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFF 234 (380)
Q Consensus 155 l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~ 234 (380)
.. |... .......+++.+++.+++.+....+..++.+|..++. +| |++..++.
T Consensus 89 ~~---~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~--~~---R~~~~~~~ 141 (437)
T TIGR00792 89 TT---PDFS-------------------ATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDP--RE---RESLSTFR 141 (437)
T ss_pred hC---CCCC-------------------cchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCH--HH---HHHHHHHH
Confidence 42 1110 0023445555666777777777777788888887532 22 78888888
Q ss_pred HHHHHHHHHHHHHHHHHhh-------hcchhhHHHHHHHHHHHHHHHHHHhhcc
Q 016902 235 YLSVTVGAIVAFTLVVYIQ-------MEHGWGSAFGALAIAMGISNMLFFIGTP 281 (380)
Q Consensus 235 ~~~~~iG~~i~~~i~~~i~-------~~~gw~~~f~i~~~~~~~~~i~~~~~~~ 281 (380)
....++|..++..+.+.+. +..+|++.+.+.+++.++..++.+...+
T Consensus 142 ~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~ 195 (437)
T TIGR00792 142 RFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLIICFFGTK 195 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHHHHcCCE
Confidence 7778888777666554443 2457999988877776666555444433
No 125
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.32 E-value=1.4e-10 Score=113.70 Aligned_cols=153 Identities=8% Similarity=-0.013 Sum_probs=110.4
Q ss_pred HHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchh----HHHHHHHHHHHHHHHHHHhhh
Q 016902 82 RMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRY----WTIAIFTTIYLAGLTGITLCA 157 (380)
Q Consensus 82 ~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~----~~i~i~~~l~~lg~~~l~l~~ 157 (380)
.+++..+...++.|++ ++|.+..+.+.+++.+.+...++.+++|+++||+ ||+ +.+.+...+.. +.+...
T Consensus 17 ~~~~g~~~p~l~~~l~-~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~---~~~~~~- 90 (382)
T PRK11128 17 FFAYGVFLPFWSVWLK-GQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDP-SQLIPALRLLALLTLLFA---VAFWFG- 90 (382)
T ss_pred HHHHHHHhhhHHHHHH-hcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhh-cchHHHHHHHHHHHHHHH---HHHHHh-
Confidence 3444445566778885 6899999999999999999999999999999998 984 23222221111 111111
Q ss_pred hcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHH
Q 016902 158 TMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLS 237 (380)
Q Consensus 158 ~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~ 237 (380)
. .+.+.+++.+++.+++.+...+...++..|.. ++ |+..++.....
T Consensus 91 ------~--------------------~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~~--~~------~~~a~~~~~~~ 136 (382)
T PRK11128 91 ------A--------------------HSFWLLFVAIGLFNLFFSPLVPLTDALANTWQ--KQ------IGLDYGKVRLW 136 (382)
T ss_pred ------c--------------------ccHHHHHHHHHHHHHHHcccccHHHHHHHHHH--hh------ccCCcchHHHH
Confidence 0 34667778888889988888888777777652 22 55666666777
Q ss_pred HHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHH
Q 016902 238 VTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNM 274 (380)
Q Consensus 238 ~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i 274 (380)
.++|..++|.+++++.+++||+..|++.++..++.++
T Consensus 137 ~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~~ 173 (382)
T PRK11128 137 GSIAFVIGSALTGKLVSWFGEQAILWILTAGVASMLL 173 (382)
T ss_pred HHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHH
Confidence 7899999999999999999999999877665544433
No 126
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.32 E-value=3.5e-10 Score=114.97 Aligned_cols=171 Identities=11% Similarity=0.076 Sum_probs=122.1
Q ss_pred HHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhh
Q 016902 79 MAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVN-NFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCA 157 (380)
Q Consensus 79 ~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~-~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~ 157 (380)
++..+..+....+.++|+.+++|++..+.+.... ...++..++.+++|+++||+ ||++.+.++.++..++.+++.+..
T Consensus 232 ~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~-g~~~~l~i~~~l~~l~~l~~~~l~ 310 (491)
T PRK11010 232 VLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRL-SLFRALMIFGILQGVSNAGYWLLS 310 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444555555667788888889999999998874 55678889999999999998 999888776665555443332211
Q ss_pred hcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHH
Q 016902 158 TMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLS 237 (380)
Q Consensus 158 ~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~ 237 (380)
.. . .+...+++..++..++.|...+...++..+..+++. .++.+++++..
T Consensus 311 ~~----~--------------------~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~------~~t~~gl~~s~ 360 (491)
T PRK11010 311 IT----D--------------------KNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSF------SATQFALLSAL 360 (491)
T ss_pred hc----c--------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC------cHHHHHHHHHH
Confidence 10 0 122333444445444444444566778888888777 78888898888
Q ss_pred HHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHHhhc
Q 016902 238 VTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGT 280 (380)
Q Consensus 238 ~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~~~~~~ 280 (380)
.++|..+++.+.|++.+..||+..|.+.+++.++++++....+
T Consensus 361 ~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~ 403 (491)
T PRK11010 361 SAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCR 403 (491)
T ss_pred HHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999988888999999999999999988888877766665543
No 127
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.31 E-value=1.5e-10 Score=112.38 Aligned_cols=130 Identities=22% Similarity=0.270 Sum_probs=100.7
Q ss_pred HHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHH
Q 016902 119 QASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITG 198 (380)
Q Consensus 119 ~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g 198 (380)
.++.++.|+++||+ |||++++++.++..++.+++.++...... .......++++|++.|
T Consensus 49 ~i~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~r~l~G 107 (394)
T TIGR00883 49 PLGAIVFGHFGDRI-GRKKTLVITLLMMGIGTLLIGLLPSYATI--------------------GIWAPILLLLARLIQG 107 (394)
T ss_pred hhHHHHhhhhhhhh-hhHHHHHHHHHHHHHHHHHHhhCCChhhh--------------------HHHHHHHHHHHHHHHH
Confidence 46789999999998 99999999999999888877764210000 0011235788899999
Q ss_pred HhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhh--------hcchhhHHHHHHHHHHH
Q 016902 199 FGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQ--------MEHGWGSAFGALAIAMG 270 (380)
Q Consensus 199 ~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~~~i~--------~~~gw~~~f~i~~~~~~ 270 (380)
++.+...+....+++|.+++++ |+...++.+.+..+|..+++.+...+. +..+|++.|.+.+++.+
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 181 (394)
T TIGR00883 108 FSLGGEWGGAALYLAEYAPPGK------RGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVL 181 (394)
T ss_pred hhccccccccHHHhhhcCCccc------chHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHH
Confidence 9999999999999999999877 899999999999999999888776553 35689999988776655
Q ss_pred HHHHH
Q 016902 271 ISNML 275 (380)
Q Consensus 271 ~~~i~ 275 (380)
++.++
T Consensus 182 ~~~~~ 186 (394)
T TIGR00883 182 IGLYL 186 (394)
T ss_pred HHHHH
Confidence 55443
No 128
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.29 E-value=1.3e-10 Score=116.07 Aligned_cols=180 Identities=15% Similarity=0.079 Sum_probs=119.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHH
Q 016902 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (380)
Q Consensus 70 ~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg 149 (380)
..+...+..++.....+++..+++.|+++..|++...+++....+.+...++.+++|+++||+ |+++....+..+..+.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~~~~~~ 330 (438)
T TIGR00712 252 LLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKV-FKGNRGATGVFFMTLV 330 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCcccHHHHHHHHHH
Confidence 345555555566666778888999999998999999999888888899999999999999997 7543333333222221
Q ss_pred HHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhh
Q 016902 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (380)
Q Consensus 150 ~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~ 229 (380)
.+.+..... .+. .+....++..++.|++..+..........|.+|++. |++
T Consensus 331 ~~~~~~~~~----~~~-------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~ 381 (438)
T TIGR00712 331 TIAVIVYWM----NPA-------------------GNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKA------AGT 381 (438)
T ss_pred HHHHHHHHh----cCC-------------------CchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhh------eee
Confidence 111111000 000 112223334444555443433333456678899777 899
Q ss_pred HHHHHHHHHHHHH-HHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHHhh
Q 016902 230 FFNFFYLSVTVGA-IVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIG 279 (380)
Q Consensus 230 ~~~~~~~~~~iG~-~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~~~~~ 279 (380)
+.++++...++|+ .++|.+.+++.+..||.++|++.+++.+++++..+..
T Consensus 382 ~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 432 (438)
T TIGR00712 382 AAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVV 432 (438)
T ss_pred ehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHHH
Confidence 9999888877764 6899999999998899999988777666666555443
No 129
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.29 E-value=9.8e-11 Score=117.81 Aligned_cols=172 Identities=8% Similarity=0.025 Sum_probs=130.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cchhHHHHHHHHHHHH
Q 016902 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAY-LGRYWTIAIFTTIYLA 148 (380)
Q Consensus 70 ~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~-~GR~~~i~i~~~l~~l 148 (380)
..+..++..++..+.+++...+++.|+. ++|++..+++...+...++..++.+++|+++|+. +++++..+++..+...
T Consensus 242 ~~~~~~~~~~l~~~~~~~~~~~l~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 320 (455)
T TIGR00892 242 GFLVYLSGNVIMFLGFFAPIIFLVPYAK-DKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFN 320 (455)
T ss_pred hHHHHHHHHHHHHHHccchHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHH
Confidence 3455555566666777777788889986 4799999999999998888889999999999974 2444444443333332
Q ss_pred HH--HHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhh
Q 016902 149 GL--TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTH 226 (380)
Q Consensus 149 g~--~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~ 226 (380)
+. +++.+. .+...+++.+++.|++.++..++..+...|.++++.
T Consensus 321 ~l~~ll~~~~----------------------------~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~------ 366 (455)
T TIGR00892 321 GLTHLLCALA----------------------------GDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQR------ 366 (455)
T ss_pred HHHHHHHHHh----------------------------chHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHH------
Confidence 32 222221 235566777888899999989999999999998776
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhhhcc-hhhHHHHHHHHHHHHHHHHH
Q 016902 227 LDRFFNFFYLSVTVGAIVAFTLVVYIQMEH-GWGSAFGALAIAMGISNMLF 276 (380)
Q Consensus 227 r~~~~~~~~~~~~iG~~i~~~i~~~i~~~~-gw~~~f~i~~~~~~~~~i~~ 276 (380)
+++.+++++...++|..++|.+++++.+.. +|++.|++.+++.+++.+..
T Consensus 367 ~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~~~ 417 (455)
T TIGR00892 367 FSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGLFL 417 (455)
T ss_pred HhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHHHH
Confidence 899999999999999999999999998877 49999998887776665543
No 130
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.29 E-value=4.6e-11 Score=119.86 Aligned_cols=149 Identities=19% Similarity=0.229 Sum_probs=132.1
Q ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCcccccccccC
Q 016902 98 YVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLG 177 (380)
Q Consensus 98 ~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~ 177 (380)
.+++++..+.+.+.+.+..++.++.+.+|+++||| |-|+++.++.++..++.++..+++.
T Consensus 66 ~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~-G~r~v~~~~~~~sa~~t~l~P~aa~------------------- 125 (466)
T KOG2532|consen 66 GEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKF-GARRVFFISGLISALLTLLTPLAAS------------------- 125 (466)
T ss_pred ceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHc-CchHHHHHHHHHHHHHHHHHHHHHH-------------------
Confidence 36888999999999999999999999999999998 9999999999999999988888754
Q ss_pred CCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhc-c
Q 016902 178 SCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQME-H 256 (380)
Q Consensus 178 ~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~~-~ 256 (380)
.....+++.|+++|++.|...|++..+.+...|..+ |+++.++.+.+..+|..++..+.+++.+. .
T Consensus 126 -------~~~~~~~~~R~lqGl~~g~~~pa~~~i~~~W~P~~E------rs~~~ail~~g~q~g~v~~mp~sg~lc~s~~ 192 (466)
T KOG2532|consen 126 -------IGFYLLLVLRFLQGLGQGVLFPAIGSILAKWAPPNE------RSTFIAILTAGSQLGTIITMPVSGLLCESSL 192 (466)
T ss_pred -------hcchhhHHHHHHhHHHHhHHHhhhhceeeeECCHHH------HHHHHHHHHHHHHHHHHHHHHhHHHHhccCC
Confidence 223367889999999999999999999999999777 99999999999999999999999999888 8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhh
Q 016902 257 GWGSAFGALAIAMGISNMLFFIG 279 (380)
Q Consensus 257 gw~~~f~i~~~~~~~~~i~~~~~ 279 (380)
||++.|++.+++.++..++++..
T Consensus 193 GW~sifY~~g~~g~i~~~~w~~~ 215 (466)
T KOG2532|consen 193 GWPSIFYVFGIVGLIWFILWFLF 215 (466)
T ss_pred CCchHHHHHHHHHHHHHHHHHHH
Confidence 99999999888877666665443
No 131
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.27 E-value=5.2e-10 Score=114.02 Aligned_cols=178 Identities=14% Similarity=0.089 Sum_probs=135.1
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHH
Q 016902 73 FIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTG 152 (380)
Q Consensus 73 ~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~ 152 (380)
.++...++.+++.......+.-+ ..++.-|....+++.....+-..+..+++|.++||+ .||+.++.+.++..+..+.
T Consensus 14 ~lw~a~~iS~lG~~~~~va~~wl-v~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~-drrrili~~~~~~~~~~~~ 91 (524)
T PF05977_consen 14 RLWIAQLISNLGDWMQTVALAWL-VTQLTGSPLMVALVQAASTLPILLLSLFAGALADRF-DRRRILILSQLLRALVALL 91 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cchHHHHHHHHHHHHHHHH
Confidence 33444455555544333333333 335566778888888888888888999999999998 9999999998887766666
Q ss_pred HHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHH
Q 016902 153 ITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFN 232 (380)
Q Consensus 153 l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~ 232 (380)
+++...... .+...+++..++.|++.+...|...+++.|+.|+++ ...+.+
T Consensus 92 L~~l~~~~~-----------------------~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~------L~~A~a 142 (524)
T PF05977_consen 92 LAVLAFFGL-----------------------LSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKED------LPAANA 142 (524)
T ss_pred HHHHHHhCc-----------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhh------HHHHHH
Confidence 555432111 356677777889999999999999999999999877 889999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHHhhcc
Q 016902 233 FFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTP 281 (380)
Q Consensus 233 ~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~~~~~~~ 281 (380)
+.....++.-.+||.++|.+....|-.+.|.+-++..+++++++...++
T Consensus 143 l~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~ 191 (524)
T PF05977_consen 143 LNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWKP 191 (524)
T ss_pred HHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 9999999999999999999988888888999888877766555444433
No 132
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.27 E-value=6e-10 Score=106.48 Aligned_cols=165 Identities=10% Similarity=-0.006 Sum_probs=123.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHH
Q 016902 68 WIAALFIFGNEMAERMAYFGLSVNMVTFMFYV--MHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTI 145 (380)
Q Consensus 68 ~~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~--~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l 145 (380)
++..++..+..++...+-.++..+++.|+.+. +|++..+++...+.+.++..++.+++++++||+ |+++.+.++.++
T Consensus 139 ~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~-g~~~~l~~~~~l 217 (310)
T TIGR01272 139 FTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMI-SQGRYLAFNAFL 217 (310)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHH
Confidence 34455555555555445566788899999854 799999999999999999999999999999997 999998888777
Q ss_pred HHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhh
Q 016902 146 YLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKT 225 (380)
Q Consensus 146 ~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~ 225 (380)
.+++.+++... .... ...+.++.|++.+.+.|...+...+.++++..
T Consensus 218 ~~~~~~l~~~~----------------------------~~~~-~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~~~---- 264 (310)
T TIGR01272 218 AVLLSIGAALT----------------------------HGYV-AMWFVLALGLFNSIMFPTIFSLALNALGRHTS---- 264 (310)
T ss_pred HHHHHHHHHHc----------------------------CCHH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhh----
Confidence 77766444332 0111 22355678999999999999999898885431
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHH
Q 016902 226 HLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMG 270 (380)
Q Consensus 226 ~r~~~~~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~ 270 (380)
+++++ . ....+|+.+.|.+.|++.|..|.+.+|+++.++.+
T Consensus 265 -~asai--~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~~~~ 305 (310)
T TIGR01272 265 -QGSGI--L-CLAIVGGAIVPLLQGSLADCLGIQLAFALPVPCYL 305 (310)
T ss_pred -hhHHH--H-HHHHhcchHHHHHHHHHHHhccchHHHHHHHHHHH
Confidence 34433 3 45668999999999999998898888886665543
No 133
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.24 E-value=4.1e-10 Score=103.24 Aligned_cols=173 Identities=17% Similarity=0.106 Sum_probs=131.9
Q ss_pred CcccCCChHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHH
Q 016902 61 DLSKTGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIA 140 (380)
Q Consensus 61 ~~~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~ 140 (380)
...........|.+..+.++-..+.+-+.+-.+.++++.+|+|+..++++.+...+.+...+++.|.++|++ ||+-+.+
T Consensus 256 Ltdv~~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~-G~n~~wv 334 (459)
T KOG4686|consen 256 LTDVNTFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKY-GFNLWWV 334 (459)
T ss_pred cccccccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhh-cceehhH
Confidence 333334444567777777766666666667778899999999999999999999999999999999999998 9986555
Q ss_pred HH-HHHHHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCC
Q 016902 141 IF-TTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDER 219 (380)
Q Consensus 141 i~-~~l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~ 219 (380)
.+ ++..+++..+++++. ..-+++..+.|+..........+.++-..|++
T Consensus 335 ~~a~~~tl~~H~~l~Ft~------------------------------lsPy~~m~~lGLsysllAcslWP~va~~vpE~ 384 (459)
T KOG4686|consen 335 ASACILTLLGHSGLFFTF------------------------------LSPYTSMTFLGLSYSLLACSLWPCVASLVPEE 384 (459)
T ss_pred HHHHHHHHHHhhhHHhhh------------------------------ccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHH
Confidence 54 455666666666642 22466777777777666666888889999988
Q ss_pred CchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcch---hhHHHHHHHHHHH
Q 016902 220 SKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHG---WGSAFGALAIAMG 270 (380)
Q Consensus 220 ~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~~~g---w~~~f~i~~~~~~ 270 (380)
. .+++++..+-..|+|-.+.+++++.|.+.-| |--.|.+..+.+.
T Consensus 385 q------LGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~a 432 (459)
T KOG4686|consen 385 Q------LGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMA 432 (459)
T ss_pred H------hcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHH
Confidence 7 9999999999999999999999999987655 4445554444443
No 134
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.23 E-value=3.1e-10 Score=112.68 Aligned_cols=164 Identities=8% Similarity=-0.082 Sum_probs=113.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHH-hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHH-HHHHHHHHH
Q 016902 70 AALFIFGNEMAERMAYFGLSVNMVTFMFY-VMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWT-IAIFTTIYL 147 (380)
Q Consensus 70 ~~~~i~~~~~~~~~~~~~i~~~l~~yl~~-~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~-i~i~~~l~~ 147 (380)
..+...+..++....++++.++++.|+++ ..|++..+++.......++..++.+++|+++||+ |||+. +.+..++..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~-~~r~~~~~~~~~~~~ 321 (412)
T TIGR02332 243 AIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRL-KERKHHTALPYLFAA 321 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhccc-CccHHHHHHHHHHHH
Confidence 45666677777778888899999999976 2477888888888899999999999999999997 87664 333333333
Q ss_pred HHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhh
Q 016902 148 AGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHL 227 (380)
Q Consensus 148 lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r 227 (380)
++.++ .... .+....+++..+.++|.....+.......|.+|++. |
T Consensus 322 ~~~~~-~~~~---------------------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~------~ 367 (412)
T TIGR02332 322 AGWLL-ASAT---------------------------DHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQA------R 367 (412)
T ss_pred HHHHH-HHhc---------------------------CCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHH------H
Confidence 33221 1110 011112222223334433333333444466777666 9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhcch-hhHHHHHHHHH
Q 016902 228 DRFFNFFYLSVTVGAIVAFTLVVYIQMEHG-WGSAFGALAIA 268 (380)
Q Consensus 228 ~~~~~~~~~~~~iG~~i~~~i~~~i~~~~g-w~~~f~i~~~~ 268 (380)
+.++++.+...++|+.++|.+.+.+.+..| |.++|++.+++
T Consensus 368 ~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~ 409 (412)
T TIGR02332 368 AIAIAVINATGNIGSALSPFLIGILKDATGSFNSGLWFVAAL 409 (412)
T ss_pred HHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhHHHHHHH
Confidence 999999999999999999999999988775 99998876654
No 135
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.21 E-value=1.3e-09 Score=110.19 Aligned_cols=171 Identities=8% Similarity=-0.023 Sum_probs=127.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-----hhHHHHHHHHH
Q 016902 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLG-----RYWTIAIFTTI 145 (380)
Q Consensus 71 ~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~G-----R~~~i~i~~~l 145 (380)
...+....+.+.+. +.+...+..++.+++|++.++.+...+...+...+-++ +|+++|++ + ||+.++++.++
T Consensus 28 ~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~-~i~G~rRr~~l~~~~~l 104 (468)
T TIGR00788 28 LAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTF-PLFGYTKRWYLVLSGLL 104 (468)
T ss_pred HHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhc-CCCCccchHHHHHHHHH
Confidence 44555577788887 66667788888889999999998888888888888766 99999998 7 67777777655
Q ss_pred HH-HHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhh
Q 016902 146 YL-AGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYK 224 (380)
Q Consensus 146 ~~-lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~ 224 (380)
.. ++...++.. + .......+.+++.+++.+....+.-++..|+.+ +++.
T Consensus 105 ~~~~~~~~l~~~-------~--------------------~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~-- 154 (468)
T TIGR00788 105 GSAILYGLLPGK-------V--------------------SSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPS-- 154 (468)
T ss_pred HHHHHHHhcccc-------c--------------------chHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCC--
Confidence 42 222221110 0 123333446788999999999999999999998 3321
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHH
Q 016902 225 THLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNML 275 (380)
Q Consensus 225 ~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~ 275 (380)
.++...++.+.+.++|..+++.+++++.+..+|+..|++.+++.++..+.
T Consensus 155 -~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~~ 204 (468)
T TIGR00788 155 -AGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLFV 204 (468)
T ss_pred -cCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHH
Confidence 24556667777788999999999999999899999999888777666443
No 136
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.21 E-value=1.9e-09 Score=106.87 Aligned_cols=146 Identities=15% Similarity=0.041 Sum_probs=105.2
Q ss_pred HHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCC
Q 016902 84 AYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFM 163 (380)
Q Consensus 84 ~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~ 163 (380)
..+++..+++.|+.+ .|++....+...+...++..++.+++|+++||+ |||+.+.++.++..++.+++....
T Consensus 246 ~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~~~~~~~~~~~~~~~~~~~~------ 317 (426)
T PRK12307 246 ANWPIFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRI-GLKKTFSIGLLMSFLFIFPLFRIP------ 317 (426)
T ss_pred HHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHHc------
Confidence 334456678888875 699988888888888888999999999999998 999998888777665544433210
Q ss_pred CCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHH
Q 016902 164 PNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAI 243 (380)
Q Consensus 164 ~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~ 243 (380)
. .....+.+..+..+++..+..+..+.+..|.+|++. |++.+++.+....+|+.
T Consensus 318 -~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~~~~~~~~~ 371 (426)
T PRK12307 318 -Q-------------------DNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEV------RGLGTGLIYNLAATSGT 371 (426)
T ss_pred -c-------------------ccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHH------HhhhhhHHHHHHhHHHH
Confidence 0 111112122222333333445566778899999877 99999998888899999
Q ss_pred HHHHHHHHhhhcchhhHHHH
Q 016902 244 VAFTLVVYIQMEHGWGSAFG 263 (380)
Q Consensus 244 i~~~i~~~i~~~~gw~~~f~ 263 (380)
++|.+.+++.+..|+....+
T Consensus 372 ~gp~~~g~l~~~~g~~~~~~ 391 (426)
T PRK12307 372 FNSMAATWLGITMGLGAALT 391 (426)
T ss_pred HHHHHHHHHHHcccHHHHHH
Confidence 99999999998888665433
No 137
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.21 E-value=7.4e-10 Score=112.11 Aligned_cols=174 Identities=11% Similarity=0.037 Sum_probs=110.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhH-----HHHHHHHHH
Q 016902 72 LFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYW-----TIAIFTTIY 146 (380)
Q Consensus 72 ~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~-----~i~i~~~l~ 146 (380)
|.+.+..++.....+++..+++.|+.+++|++...++...+++.++..++.+++|+++||+ |||+ ..+......
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-~~r~~~~~r~~~~~~~~~ 333 (476)
T PLN00028 255 WILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVA-ARRFGMRGRLWALWIVQT 333 (476)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-HHhcCcchhHHHHHHHHH
Confidence 4444444444455556667789999989999999999999999999999999999999997 8762 222111111
Q ss_pred HHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhh
Q 016902 147 LAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTH 226 (380)
Q Consensus 147 ~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~ 226 (380)
+.+..++.+. . . .+.....+..++.+++.++..+...++..+..+ +.
T Consensus 334 l~~i~~~~~~-~-----~--------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~------ 380 (476)
T PLN00028 334 LGGVFCIWLG-R-----A--------------------NSLGAAIVVMILFSIFVQAACGATFGIVPFVSR-RS------ 380 (476)
T ss_pred HHHHHHHHhc-c-----c--------------------chHHHHHHHHHHHHHHHHHhhhhhcccCcccCh-hh------
Confidence 1111111111 0 0 123333444455555555555555555555443 33
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHHhhc
Q 016902 227 LDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGT 280 (380)
Q Consensus 227 r~~~~~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~~~~~~ 280 (380)
++...++.+...++|+.+++.+.+ ..+..+|..+|++.+++.+++.++.++.+
T Consensus 381 ~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 381 LGVISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred chhhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHHHhee
Confidence 788888887777788877776543 22344699999988888777777665553
No 138
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.21 E-value=4e-09 Score=104.10 Aligned_cols=167 Identities=12% Similarity=-0.098 Sum_probs=118.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHH
Q 016902 72 LFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLT 151 (380)
Q Consensus 72 ~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~ 151 (380)
+...+..++..+..++.....+.|+.+.+|++..+.+.......++..++.++.|+++||+ ||++.+.++.++..++.+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~~g~~ 296 (406)
T PRK15402 218 VAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRR-PLRSLIRMGLWPMVAGLL 296 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHH
Confidence 3333333344444455556678888888999998888777777777888899999999998 999999998888888877
Q ss_pred HHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHH
Q 016902 152 GITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFF 231 (380)
Q Consensus 152 ~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~ 231 (380)
++.+.... .+ .+...++++.++.++|.+...+....+.....+ ++ +++..
T Consensus 297 ~~~~~~~~---~~--------------------~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~------~g~~~ 346 (406)
T PRK15402 297 LAALATVI---SS--------------------HAYLWLTAGLSLYAFGIGLANAGLYRLTLFSSD-VS------KGTVS 346 (406)
T ss_pred HHHHHHHc---cc--------------------ccHHHHHHHHHHHHHHHHHHhhhHHHHHhhhcc-cc------ccHHH
Confidence 76653210 00 234556677788888888776666555433332 44 89999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHH
Q 016902 232 NFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAM 269 (380)
Q Consensus 232 ~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~ 269 (380)
+.+++...+|..+|+.+.+++.+..++....++.+++.
T Consensus 347 ~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~ 384 (406)
T PRK15402 347 AAMGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANG 384 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHH
Confidence 99999999999999999999887777655444443333
No 139
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.21 E-value=2.6e-09 Score=103.90 Aligned_cols=179 Identities=16% Similarity=0.089 Sum_probs=137.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHH
Q 016902 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (380)
Q Consensus 70 ~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg 149 (380)
.++..+...++...+.|...+++-+|+++..|++....+++...|.++..++.+++|+++|| +.++++....++..+.
T Consensus 212 ~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr--~~~~~l~~~~~l~a~~ 289 (394)
T COG2814 212 GVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR--GPRRALIAALLLLALA 289 (394)
T ss_pred hHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc--cchhHHHHHHHHHHHH
Confidence 46777777777788888888999999999999999999999999999999999999999998 7888887777776666
Q ss_pred HHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhh
Q 016902 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (380)
Q Consensus 150 ~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~ 229 (380)
++.+.+.. .+.....+..++.|+..+........-.++ .-+++ +..
T Consensus 290 ~l~l~~~~---------------------------~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~------~~~ 335 (394)
T COG2814 290 LLALTFTG---------------------------ASPALALALLFLWGFAFSPALQGLQTRLAR-LAPDA------ADL 335 (394)
T ss_pred HHHHHHhc---------------------------chHHHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCc------hHH
Confidence 66655531 233444455555566555544444455555 22344 677
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHHhhccccc
Q 016902 230 FFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYR 284 (380)
Q Consensus 230 ~~~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~~~~~~~~~~ 284 (380)
..+++....|+|..+|..+++.+.++.|+....++.+++.++++++.+...+.++
T Consensus 336 a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~~~~~ 390 (394)
T COG2814 336 AGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLSARKDR 390 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 7788888888888888889999999999999999999998888887766655443
No 140
>PRK09669 putative symporter YagG; Provisional
Probab=99.20 E-value=8.7e-10 Score=110.43 Aligned_cols=185 Identities=10% Similarity=0.030 Sum_probs=121.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---cchhHH-HHHHH
Q 016902 68 WIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAY---LGRYWT-IAIFT 143 (380)
Q Consensus 68 ~~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~---~GR~~~-i~i~~ 143 (380)
++.-+.-.+..+..++.+..+..+++.|+++.+|++...++.+..+..+.-.+..++.|+++||. +||||. ++++.
T Consensus 8 ~~~~~~yg~g~~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~ 87 (444)
T PRK09669 8 TKDKIGYGLGDTACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFA 87 (444)
T ss_pred HHHHHhhcchhhhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHH
Confidence 33333333444566666666778899999999999999999999999999999999999999983 388655 44565
Q ss_pred HHHHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchh
Q 016902 144 TIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDY 223 (380)
Q Consensus 144 ~l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~ 223 (380)
+...+..+++... |.... ......+++...+.+++......+..++.+|..++. +|
T Consensus 88 ~~~~i~~~l~f~~---p~~~~-------------------~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~--~e 143 (444)
T PRK09669 88 IPFGVVCLLTFYT---PDFGA-------------------TGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDP--RE 143 (444)
T ss_pred HHHHHHHHHHHhC---CCCCc-------------------chHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCH--HH
Confidence 6665655444331 11100 123445555555666666677777788999988542 22
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHHhhh-------cchhhHHHHHHHHHHHHHHHHHHhh
Q 016902 224 KTHLDRFFNFFYLSVTVGAIVAFTLVVYIQM-------EHGWGSAFGALAIAMGISNMLFFIG 279 (380)
Q Consensus 224 ~~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~-------~~gw~~~f~i~~~~~~~~~i~~~~~ 279 (380)
|.+..++.....++|..+++.+...+.. ..||+..+.+.+++..+..++.+..
T Consensus 144 ---R~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~~~~~ 203 (444)
T PRK09669 144 ---RHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFCCFFM 203 (444)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHhCC
Confidence 7788888777777777776654433221 2467777776666655554443333
No 141
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.20 E-value=2.2e-09 Score=108.04 Aligned_cols=179 Identities=17% Similarity=0.079 Sum_probs=120.1
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHH-------
Q 016902 67 GWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTI------- 139 (380)
Q Consensus 67 ~~~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i------- 139 (380)
+++.++.+.+..++....++.+.++++.|+.+.+|++..+++....+..++..++.+++|+++|++ ++|+..
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~-~~~~~~~~~~~~~ 337 (465)
T TIGR00894 259 KSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFL-KSSKTLSLTAARK 337 (465)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCcHHHHHH
Confidence 445678888888888888888999999999999999999999999999999999999999999987 543211
Q ss_pred -HHHHHHHHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCC
Q 016902 140 -AIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDE 218 (380)
Q Consensus 140 -~i~~~l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~ 218 (380)
..+.....++..++.+... . .+....++.+.+.+.+.++..+.......|..+.
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~-----~--------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 392 (465)
T TIGR00894 338 IFNGIGGLGPGIFAYALPYL-----S--------------------AAFYLTIIILTLANAVSSGPLAGVLINSLDLAPR 392 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHc-----C--------------------CchHHHHHHHHHHHHHhhhhhhhhhhchhhcChh
Confidence 1111111111111111100 0 1122233334444444444444444444455543
Q ss_pred CCchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcc---hhhHHHHHHHHHHHHHHHHHHh
Q 016902 219 RSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEH---GWGSAFGALAIAMGISNMLFFI 278 (380)
Q Consensus 219 ~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~~~---gw~~~f~i~~~~~~~~~i~~~~ 278 (380)
. ++...++.++..++|+.++|.+.+++.+.. +|...|.+.++..+++.++...
T Consensus 393 -~------~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~ 448 (465)
T TIGR00894 393 -F------LGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLI 448 (465)
T ss_pred -H------HHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeee
Confidence 3 899999999999999999999999987643 4888888887777776655443
No 142
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.19 E-value=6.6e-10 Score=107.34 Aligned_cols=183 Identities=13% Similarity=-0.016 Sum_probs=139.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHH
Q 016902 69 IAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLA 148 (380)
Q Consensus 69 ~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~l 148 (380)
+..|.+.+..+..--++.++..+++.|++++|+.+..+++.+...+.....+.-++||+||||+ |.+|++++.....++
T Consensus 218 ~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~-Gg~rv~~~~f~~~~~ 296 (417)
T COG2223 218 KDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRI-GGRRVTLAVFVGMAL 296 (417)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhc-cchhHHHHHHHHHHH
Confidence 3468888888888888889999999999999999999999999999999999999999999998 988888888888887
Q ss_pred HHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhh
Q 016902 149 GLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLD 228 (380)
Q Consensus 149 g~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~ 228 (380)
+..++.+... ... .+.+...++...+..++..|.-...+..++...|+.+ -+
T Consensus 297 ~~~~l~~~~~---~~~------------------~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~~-------~G 348 (417)
T COG2223 297 AAALLSLFLT---GFG------------------HGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPKE-------TG 348 (417)
T ss_pred HHHHHHcccc---ccc------------------cCcchHHHHHHHHHHHHHhccCcchheeechHHHHhh-------hh
Confidence 7777665410 000 0022333444344444445555555666666677642 57
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhcch-hhHHHHHHHHHHHHHHHHHHhhc
Q 016902 229 RFFNFFYLSVTVGAIVAFTLVVYIQMEHG-WGSAFGALAIAMGISNMLFFIGT 280 (380)
Q Consensus 229 ~~~~~~~~~~~iG~~i~~~i~~~i~~~~g-w~~~f~i~~~~~~~~~i~~~~~~ 280 (380)
...++......+|++.-|...+...+..| +...|++...+.+++.++.+...
T Consensus 349 ~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~y 401 (417)
T COG2223 349 AVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWALY 401 (417)
T ss_pred HHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888889999888999999988887 88899988888777777655443
No 143
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.19 E-value=7.2e-10 Score=107.00 Aligned_cols=161 Identities=16% Similarity=0.122 Sum_probs=115.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHH--HHH
Q 016902 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTT--IYL 147 (380)
Q Consensus 70 ~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~--l~~ 147 (380)
.++.+.+..++.....+++..+++.|+.+.+|++..+++.....+.++..++.++.|+++||+.+|++..+.... +..
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~ 296 (379)
T TIGR00881 217 VLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALII 296 (379)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHH
Confidence 355555666666666777788899999999999999999999999999999999999999986344443322211 111
Q ss_pred HHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhh
Q 016902 148 AGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHL 227 (380)
Q Consensus 148 lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r 227 (380)
++..++... +. .+...+++..++.|+..++..+....+..|.+|++. |
T Consensus 297 ~~~~~~~~~-------~~-------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~ 344 (379)
T TIGR00881 297 VSLLVYWLN-------PA-------------------ANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKA------A 344 (379)
T ss_pred HHHHHHhcC-------cc-------------------hhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcch------h
Confidence 221111110 00 223334445555666555666666778899999887 9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHH
Q 016902 228 DRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAF 262 (380)
Q Consensus 228 ~~~~~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f 262 (380)
++.+++++....+|..+++.+.+++.+..||++.|
T Consensus 345 g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 345 GTAAGFVGFFAYLGGILAGLPLGYLADGFGWAGAF 379 (379)
T ss_pred HHHHHHHHHhhhhhhhhhhhhHHHHHHhhcccccC
Confidence 99999999999999999999999999999998754
No 144
>PRK10504 putative transporter; Provisional
Probab=99.18 E-value=3.6e-09 Score=106.56 Aligned_cols=156 Identities=10% Similarity=-0.026 Sum_probs=116.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHH
Q 016902 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (380)
Q Consensus 71 ~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~ 150 (380)
....+...++..+++.......+.|++..+|.+...++.......++..++.++.|+++||+ |||+++.++.++..++.
T Consensus 263 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~-g~~~~~~~~~~~~~~~~ 341 (471)
T PRK10504 263 FSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRF-GYRRVLVATTLGLALVS 341 (471)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHHH
Confidence 34444555555555544445567777778999999998888888888888888999999998 99999998888777776
Q ss_pred HHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhH
Q 016902 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (380)
Q Consensus 151 ~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~ 230 (380)
.++..... . .....+.+..++.|++.+...+....+..+.+|++. ++..
T Consensus 342 ~~~~~~~~------~-------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~ 390 (471)
T PRK10504 342 LLFMLVAL------L-------------------GWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNL------ASSG 390 (471)
T ss_pred HHHHhccc------c-------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHh------ccch
Confidence 65544210 0 122333445566778888878888888889998776 8999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcchh
Q 016902 231 FNFFYLSVTVGAIVAFTLVVYIQMEHGW 258 (380)
Q Consensus 231 ~~~~~~~~~iG~~i~~~i~~~i~~~~gw 258 (380)
++++++...+|..+|+.+.+.+.+..|+
T Consensus 391 ~~~~~~~~~~g~~ig~~i~g~ll~~~g~ 418 (471)
T PRK10504 391 NSLLSMIMQLSMSIGVTIAGLLLGLFGQ 418 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999998887665554
No 145
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.18 E-value=1.5e-09 Score=104.36 Aligned_cols=153 Identities=9% Similarity=0.005 Sum_probs=119.8
Q ss_pred HHHHHHHHHHHHHHHHHHH-HhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHH
Q 016902 71 ALFIFGNEMAERMAYFGLS-VNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (380)
Q Consensus 71 ~~~i~~~~~~~~~~~~~i~-~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg 149 (380)
.+..+...++....+++.. ...+.|+++.+|.+..+.+.......++..++.++.++++|++ ||++.+.++.++..++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~ 290 (365)
T TIGR00900 212 LRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYF-KRMALMTGAIFVIGLA 290 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chhHHHHHHHHHHHHH
Confidence 3444444455555555555 5566777767999999999999999999999999999999997 9999888876666665
Q ss_pred HHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhh
Q 016902 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (380)
Q Consensus 150 ~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~ 229 (380)
..++.... .+...+++..++.|++.+...+...++..|.+|++. |++
T Consensus 291 ~~~~~~~~---------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~ 337 (365)
T TIGR00900 291 ILVVGLTP---------------------------PNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAEL------LGR 337 (365)
T ss_pred HHHHHhhc---------------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HHH
Confidence 55544320 124556777788899999888999999999999776 999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcch
Q 016902 230 FFNFFYLSVTVGAIVAFTLVVYIQMEHG 257 (380)
Q Consensus 230 ~~~~~~~~~~iG~~i~~~i~~~i~~~~g 257 (380)
.+++++...++|..+++.+.+++.+..|
T Consensus 338 ~~~~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 338 VFGAQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999999987653
No 146
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.17 E-value=1.2e-09 Score=109.91 Aligned_cols=155 Identities=13% Similarity=0.112 Sum_probs=123.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHH
Q 016902 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (380)
Q Consensus 71 ~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~ 150 (380)
.+...+..++..+.+++....++.|+++.+|++..+++.......++..++.++.|+++||+ |||+.+.++..+..++.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~g~~~~~~~~ 335 (485)
T TIGR00711 257 FTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKI-DPRKLVTIGLILYAVGF 335 (485)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcHHHHHHHHHHHHHHH
Confidence 34445555666677777778899999999999999999999889999999999999999997 99999998888888777
Q ss_pred HHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhH
Q 016902 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (380)
Q Consensus 151 ~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~ 230 (380)
.++.+. +.+. .+...++...++.|+|.+...+.......+.+|+++ ++.+
T Consensus 336 ~~~~~~-----~~~~-------------------~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~------~g~~ 385 (485)
T TIGR00711 336 YWRAFT-----FTPD-------------------TPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHK------IARG 385 (485)
T ss_pred HHHhcc-----CCCC-------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH------HhHH
Confidence 766532 0111 234445566778899988887777777788888766 9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcc
Q 016902 231 FNFFYLSVTVGAIVAFTLVVYIQMEH 256 (380)
Q Consensus 231 ~~~~~~~~~iG~~i~~~i~~~i~~~~ 256 (380)
.+++++..++|+.+|+.+.+.+.++.
T Consensus 386 ~~~~~~~~~~g~~ig~~i~g~~~~~~ 411 (485)
T TIGR00711 386 SSLSNFTRQLGGSIGTALITTILTNR 411 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999988887653
No 147
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.17 E-value=4.4e-09 Score=103.17 Aligned_cols=165 Identities=10% Similarity=-0.024 Sum_probs=111.3
Q ss_pred HHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhh
Q 016902 78 EMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCA 157 (380)
Q Consensus 78 ~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~ 157 (380)
.++.....+...++++.|+.+.+|++....+...+...++..++.++.|+++||+ |+++.+.++..+..++.+++....
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~-~~~~~~~~~~~~~~i~~~~~~~~~ 286 (382)
T PRK10091 208 TMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRY-SPLRIAAVTDFIIVLALLMLFFFG 286 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheecccc-CchhHHHHHHHHHHHHHHHHHHHH
Confidence 3333344444556677888888999999999999999999999999999999997 999999888887777765544321
Q ss_pred hcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhcc-CCCCCchhhhhhhhHHHHHHH
Q 016902 158 TMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQ-FDERSKDYKTHLDRFFNFFYL 236 (380)
Q Consensus 158 ~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~-f~~~~~~~~~~r~~~~~~~~~ 236 (380)
.+....++..++.++|.++..+.......+. .+.+. ++.. ..+.
T Consensus 287 ---------------------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~--~~~~ 331 (382)
T PRK10091 287 ---------------------------GMKTASLIFAFICCAGLFALSAPLQILLLQNAKGGEL------LGAA--GGQI 331 (382)
T ss_pred ---------------------------hhHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchH------HHHH--HHHH
Confidence 1122334444455555544444433333333 33222 3433 2355
Q ss_pred HHHHHHHHHHHHHHHhhhc-chhhHHHHHHHHHHHHHHHHHHh
Q 016902 237 SVTVGAIVAFTLVVYIQME-HGWGSAFGALAIAMGISNMLFFI 278 (380)
Q Consensus 237 ~~~iG~~i~~~i~~~i~~~-~gw~~~f~i~~~~~~~~~i~~~~ 278 (380)
...+|..+||.+.+++.+. .+|++.+.+.++..++.+..+..
T Consensus 332 ~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (382)
T PRK10091 332 AFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLL 374 (382)
T ss_pred HHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHHH
Confidence 6789999999999998875 67999998877666655554433
No 148
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.15 E-value=6.9e-09 Score=101.76 Aligned_cols=165 Identities=6% Similarity=-0.115 Sum_probs=120.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHH
Q 016902 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (380)
Q Consensus 71 ~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~ 150 (380)
.+..++..++....+.++.+.++.|+. +.|++....+...+....+..+..++.|++.||+ |+++.+.++.++..++.
T Consensus 207 ~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~l~~~~~~~~~~~ 284 (382)
T PRK11128 207 VWRFLLCVSLLQGSHAAYYGFSAIYWQ-AAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRW-SARDLLLLSAICGVVRW 284 (382)
T ss_pred HHHHHHHHHHHHHHhHhHHHHHHHHHH-HCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHH
Confidence 444444445445555566677788885 5899988888888877778888889999999998 99999998888877776
Q ss_pred HHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhH
Q 016902 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (380)
Q Consensus 151 ~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~ 230 (380)
+++... .+...+++..++.|++.+...+....+..++ ++++ +++.
T Consensus 285 ~~~~~~----------------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~------~~~~ 329 (382)
T PRK11128 285 GLMGST----------------------------TALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSE------VIRL 329 (382)
T ss_pred HHHHhh----------------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhh------hHHH
Confidence 655442 3455667777888888887777777777665 4333 5677
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHH
Q 016902 231 FNFFY-LSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISN 273 (380)
Q Consensus 231 ~~~~~-~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~ 273 (380)
.+++. +...+|..+++.++|++.+..|+ ..|++.+++.++++
T Consensus 330 ~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~~ 372 (382)
T PRK11128 330 QALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPAL 372 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHH
Confidence 77765 55677888999999999998887 35555555544443
No 149
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.15 E-value=3e-09 Score=104.73 Aligned_cols=163 Identities=12% Similarity=0.092 Sum_probs=119.6
Q ss_pred HHHHHHHHHHHHHhHHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHH
Q 016902 78 EMAERMAYFGLSVNMVTFMFYVM---HKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGIT 154 (380)
Q Consensus 78 ~~~~~~~~~~i~~~l~~yl~~~~---~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~ 154 (380)
.++....+......++.|+...+ +.+....+...++..+...++.++.|++.||+ |||+.+.++.+++.++.++..
T Consensus 224 ~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~-g~~~~l~~~~~l~~l~~~~~~ 302 (396)
T TIGR00882 224 VVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRI-GAKNALLIAGTIMSVRIIGSS 302 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccchhHHHHHHHHHHHHHHHH
Confidence 33333444444456778887665 44555667777777777777888999999998 999999998888887776654
Q ss_pred hhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHH-
Q 016902 155 LCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNF- 233 (380)
Q Consensus 155 l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~- 233 (380)
.. .+...+++...+.+++..........+..+.++.+. +++.+++
T Consensus 303 ~~----------------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~at~~~~~ 348 (396)
T TIGR00882 303 FA----------------------------TTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRL------SATIYLIG 348 (396)
T ss_pred hc----------------------------CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcce------EEEeehHH
Confidence 42 234455666777787776666666667778888766 6777766
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHH
Q 016902 234 FYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNML 275 (380)
Q Consensus 234 ~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~ 275 (380)
+++...+|..+++.+++++.+..||+..|.+.+++.++..++
T Consensus 349 ~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~ 390 (396)
T TIGR00882 349 FQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLI 390 (396)
T ss_pred HHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 678899999999999999999999999998877776655544
No 150
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.15 E-value=4.1e-13 Score=134.27 Aligned_cols=136 Identities=20% Similarity=0.233 Sum_probs=111.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcch
Q 016902 106 DSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSW 185 (380)
Q Consensus 106 ~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~ 185 (380)
..++..+.+.++..+|.+++|+++|++ |||++++++.++.++|.++..++... .
T Consensus 47 ~~~~~~~~~~~g~~~G~~~~g~~~d~~-GRk~~~~~~~~~~~i~~~~~~~~~~~-------------------------~ 100 (451)
T PF00083_consen 47 LSSLLTSSFFIGAIVGALIFGFLADRY-GRKPALIISALLMIIGSILIAFAPSY-------------------------N 100 (451)
T ss_pred HHHHHHHHHHhhhcccccccccccccc-cccccccccccccccccccccccccc-------------------------c
Confidence 457888999999999999999999998 99999999999999999888775210 1
Q ss_pred hHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhh---cchhhHHH
Q 016902 186 QMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQM---EHGWGSAF 262 (380)
Q Consensus 186 ~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~---~~gw~~~f 262 (380)
+...+.++|++.|+|.|+..+..+.++.|..|++. |+....+++....+|..++..+...+.. +.+||+.+
T Consensus 101 ~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~------R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~ 174 (451)
T PF00083_consen 101 NFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKH------RGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILL 174 (451)
T ss_pred ccccccccccccccccccccccccccccccccccc------ccccccccccccccccccccccccccccccccccccccc
Confidence 56778999999999999999999999999999888 8888888888888888777665543322 34599888
Q ss_pred HHHHHHHHHHH
Q 016902 263 GALAIAMGISN 273 (380)
Q Consensus 263 ~i~~~~~~~~~ 273 (380)
++.++..++.+
T Consensus 175 ~~~~~~~l~~~ 185 (451)
T PF00083_consen 175 IFGAIPSLLVL 185 (451)
T ss_pred ccccccccccc
Confidence 87766654433
No 151
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.15 E-value=2.7e-09 Score=106.07 Aligned_cols=160 Identities=16% Similarity=0.056 Sum_probs=115.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHH
Q 016902 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (380)
Q Consensus 70 ~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg 149 (380)
..+..++..++..++++......+.|++..++ +....+....+..++..++.+++++++||+ |||+++.++.++..++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-g~~~~~~~~~~~~~~~ 300 (437)
T TIGR00792 223 QLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKF-GRKILFAGGILLMVLG 300 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHH
Confidence 34455555566666665544444445544455 445566667777888888999999999998 9999999998888887
Q ss_pred HHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCc-hhhhhhh
Q 016902 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSK-DYKTHLD 228 (380)
Q Consensus 150 ~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~-~~~~~r~ 228 (380)
.+++.+.. .+...+++..++.+++.+...+...++.+|..|.++- ..++.++
T Consensus 301 ~~~~~~~~---------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 353 (437)
T TIGR00792 301 YLIFFFAG---------------------------SNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEG 353 (437)
T ss_pred HHHHHHcc---------------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchH
Confidence 76665420 1334455666778889888888999999998874321 1122378
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhcchh
Q 016902 229 RFFNFFYLSVTVGAIVAFTLVVYIQMEHGW 258 (380)
Q Consensus 229 ~~~~~~~~~~~iG~~i~~~i~~~i~~~~gw 258 (380)
.+++++++...+|..+++.+.+++.+..||
T Consensus 354 ~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~ 383 (437)
T TIGR00792 354 LVYSVRTFVRKLGQALAGFLVGLILGIIGY 383 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999999999999998776665
No 152
>TIGR00895 2A0115 benzoate transport.
Probab=99.15 E-value=2.1e-09 Score=104.57 Aligned_cols=149 Identities=14% Similarity=0.024 Sum_probs=111.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHH
Q 016902 68 WIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYL 147 (380)
Q Consensus 68 ~~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~ 147 (380)
++..+...+..++....++++..+++ |+.+++|++...++.......++..++.+++|+++||+ ||++.+....+..+
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~ 326 (398)
T TIGR00895 249 ARITVLLWLLYFMLLVGVYFLTNWLP-KLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRL-GPRVTALLLLLGAV 326 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-chHHHHHHHHHHHH
Confidence 34444555555566666666666666 77788999999999999999999999999999999998 99854443333333
Q ss_pred HHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhh
Q 016902 148 AGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHL 227 (380)
Q Consensus 148 lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r 227 (380)
+..++.... .+...+++..++.+++.++..+...++.+|.+|++. |
T Consensus 327 ~~~~~~~~~----------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~ 372 (398)
T TIGR00895 327 FAVLVGSTL----------------------------FSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAI------R 372 (398)
T ss_pred HHHHHHHHh----------------------------hCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHH------H
Confidence 222222211 134445666778889988889999999999999777 9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHh
Q 016902 228 DRFFNFFYLSVTVGAIVAFTLVVYI 252 (380)
Q Consensus 228 ~~~~~~~~~~~~iG~~i~~~i~~~i 252 (380)
+..+++++....+|..++|.+++++
T Consensus 373 g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 373 ATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 9999999999999999999998875
No 153
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.15 E-value=4.7e-10 Score=106.80 Aligned_cols=116 Identities=16% Similarity=0.075 Sum_probs=101.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCC
Q 016902 103 SFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPA 182 (380)
Q Consensus 103 s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~ 182 (380)
+..-++.+-+.|.++.++.++++|.+||+| |||++++++.+...+...+.+.+
T Consensus 66 ~~~yaGflGSsF~ilQ~~sS~~~G~~SD~y-GRkpvll~c~~~va~s~ll~~~S-------------------------- 118 (451)
T KOG2615|consen 66 SVFYAGFLGSSFSILQFISSPLWGCLSDRY-GRKPVLLACLIGVALSYLLWALS-------------------------- 118 (451)
T ss_pred cchhhhhHhhHHHHHHHHhhhhhhhhhhhh-CchHHHHHHHHHHHHHHHHHHHH--------------------------
Confidence 345678888999999999999999999999 99999999999888887777765
Q ss_pred cchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhh
Q 016902 183 KSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQM 254 (380)
Q Consensus 183 ~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~ 254 (380)
.+...+.++|++.|+..|- ...+-++++|.+++++ |+.+++....+..+|..+||.+++|+..
T Consensus 119 --~~F~afv~aR~l~Gi~kgn-l~v~rAiisdV~sek~------r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 119 --RNFAAFVLARFLGGIFKGN-LSVIRAIISDVVSEKY------RPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred --HHHHHHHHHHHhhhhccCc-hHHHHHHHHhhcChhh------ccceeeeeehhhhcchhhcchhhhHHHh
Confidence 4666777789999998765 4667899999999888 9999999999999999999999999976
No 154
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.14 E-value=6.1e-09 Score=104.90 Aligned_cols=154 Identities=9% Similarity=-0.042 Sum_probs=106.3
Q ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCcccccc
Q 016902 94 TFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRIS 173 (380)
Q Consensus 94 ~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~~~~~c~~~~ 173 (380)
+++.+.+|++...+........+...++.+++|+++||+ |||+.++++.++..++++++.+... ++
T Consensus 295 p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~-g~r~~~i~~~~~~~v~~~~l~~~~~-----~~-------- 360 (479)
T PRK10077 295 PEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKF-GRKPLQIIGALGMAIGMFSLGTAFY-----TQ-------- 360 (479)
T ss_pred HHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHh-cChHHHHHhHHHHHHHHHHHHHHHh-----cC--------
Confidence 445567888877666666667777888899999999998 9999999999988888877664311 00
Q ss_pred cccCCCCCCcchhHHHHHHHHHHHHHhccc-hhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHHH--
Q 016902 174 QLLGSCEPAKSWQMLYLYTVLYITGFGAAG-IRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVV-- 250 (380)
Q Consensus 174 ~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~-~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~~-- 250 (380)
........+.++.+++.+. ..++...+.+|.+|++. |++++++.+....+|..+++.+.+
T Consensus 361 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~------r~~~~g~~~~~~~~g~~~~~~~~p~~ 423 (479)
T PRK10077 361 -----------APGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAI------RGKALAIAVAAQWIANYFVSWTFPMM 423 (479)
T ss_pred -----------cccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhH------HHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 0111222333344444433 34677899999999877 999999988888777777755444
Q ss_pred ----HhhhcchhhHHHHHHHHHHHHHHHHHHh
Q 016902 251 ----YIQMEHGWGSAFGALAIAMGISNMLFFI 278 (380)
Q Consensus 251 ----~i~~~~gw~~~f~i~~~~~~~~~i~~~~ 278 (380)
++.+..+|++.|++.++..+++.++.+.
T Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (479)
T PRK10077 424 DKNSWLVAHFHNGFSYWIYGCMGVLAALFMWK 455 (479)
T ss_pred HhccchhhhccCccHHHHHHHHHHHHHHHHHh
Confidence 4456778888888776665555554433
No 155
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.13 E-value=1.6e-09 Score=110.23 Aligned_cols=169 Identities=15% Similarity=0.101 Sum_probs=108.4
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHH
Q 016902 75 FGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSN------------AVNNFLGISQASSVLGGFLADAYLGRYWTIAIF 142 (380)
Q Consensus 75 ~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~------------~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~ 142 (380)
....++..+.+|++..+++.+++ +.|++...++. ...+..++..++.+++++++||+ |||++++++
T Consensus 294 ~~~~~~~~~~~y~~~~~~p~i~~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~-gRR~~l~~~ 371 (502)
T TIGR00887 294 AGSWFLLDIAFYGVNLNQKVILS-AIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDII-GRKPIQLMG 371 (502)
T ss_pred HHHHHHHHHHHHccccccHHHHH-HHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-cchhHHHHH
Confidence 34445556778888777777775 67876432211 12223344555778889999998 999999888
Q ss_pred HHHHHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCch
Q 016902 143 TTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKD 222 (380)
Q Consensus 143 ~~l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~ 222 (380)
.++..++.+++.+.... . + .. ..+....++..++..+..+....+.+|.||.+.
T Consensus 372 ~~~~~~~~~~l~~~~~~--~--~-------------------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~-- 425 (502)
T TIGR00887 372 FFILTVLFFVLGFAYNH--L--S-------------------TH-GFLAIYVLAQFFANFGPNATTFIVPGEVFPTRY-- 425 (502)
T ss_pred HHHHHHHHHHHHHHHHh--c--c-------------------hh-HHHHHHHHHHHHHhcCCCchhhhhhhccCchhH--
Confidence 87777666655543110 0 0 11 111111112222223344566677899999988
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhc----------chhhHHHHHHHHHHHHHHHH
Q 016902 223 YKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQME----------HGWGSAFGALAIAMGISNML 275 (380)
Q Consensus 223 ~~~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~~----------~gw~~~f~i~~~~~~~~~i~ 275 (380)
|+.+.++.+....+|+++++.+.+++.+. .++...|++.+++.+++.++
T Consensus 426 ----R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~ 484 (502)
T TIGR00887 426 ----RSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILF 484 (502)
T ss_pred ----HHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998763 34455667666666555443
No 156
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.13 E-value=1.2e-08 Score=99.24 Aligned_cols=157 Identities=13% Similarity=0.100 Sum_probs=110.0
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHh
Q 016902 76 GNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITL 155 (380)
Q Consensus 76 ~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l 155 (380)
+...+....+++...+.+.|+.+.+|++..+.+.+.....++..++.+++|+++||+ |||+.+.++..+..++.+++..
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~-~~~~~~~~~~~~~~~~~~~~~~ 291 (385)
T TIGR00710 213 LIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKW-GAKSLLRMGLILFAVSAVLLEI 291 (385)
T ss_pred HHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHH
Confidence 333344455556666778888889999999999988888899999999999999997 9999998888777777666654
Q ss_pred hhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHH
Q 016902 156 CATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFY 235 (380)
Q Consensus 156 ~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~ 235 (380)
.... +. .....+++...+.++|.+...+.......|.+| +. +++..++++
T Consensus 292 ~~~~----~~-------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~------~g~~~~~~~ 341 (385)
T TIGR00710 292 TAIL----GL-------------------GSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HV------AGTASALFG 341 (385)
T ss_pred HHHh----cc-------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-cc------chHHHHHHH
Confidence 3210 00 123344555667888888888888888888776 33 788888877
Q ss_pred HHHHH-HHHHHHHHHHHhhhcchhhHHHHH
Q 016902 236 LSVTV-GAIVAFTLVVYIQMEHGWGSAFGA 264 (380)
Q Consensus 236 ~~~~i-G~~i~~~i~~~i~~~~gw~~~f~i 264 (380)
..... |+..++. .+.+.++.+|...+..
T Consensus 342 ~~~~~~g~i~~~~-~~~~~~~~~~~~~~~~ 370 (385)
T TIGR00710 342 TLRLVLGAIVGYL-VSLIHGNTAWPMSLSC 370 (385)
T ss_pred HHHHHHHHHHHHH-HHhccccChHHHHHHH
Confidence 66655 4444444 4556555555544443
No 157
>PRK10133 L-fucose transporter; Provisional
Probab=99.13 E-value=5.5e-09 Score=104.67 Aligned_cols=162 Identities=10% Similarity=0.034 Sum_probs=118.6
Q ss_pred HHHHHHHHHHHHHHHhHHHHH-HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHH
Q 016902 76 GNEMAERMAYFGLSVNMVTFM-FYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGIT 154 (380)
Q Consensus 76 ~~~~~~~~~~~~i~~~l~~yl-~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~ 154 (380)
+..++.....++...+++.|+ ++.+|++...++.....+.++..++.+++|+++||+ ||++++.++.++..+++.+..
T Consensus 265 l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~-g~~~~l~~~~~~~~~~~~~~~ 343 (438)
T PRK10133 265 LAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRF-APHKVLAAYALIAMALCLISA 343 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHH
Confidence 334444555566667788886 567899999999999999999999999999999997 999999888777666554443
Q ss_pred hhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHH
Q 016902 155 LCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFF 234 (380)
Q Consensus 155 l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~ 234 (380)
+. .+. ..+.+..+.++|.+.+.|+..+...+.++++.. .++.+.
T Consensus 344 ~~----------------------------~~~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~~~-----~as~l~-- 387 (438)
T PRK10133 344 FA----------------------------GGH-VGLIALTLCSAFMSIQYPTIFSLGIKNLGQDTK-----YGSSFI-- 387 (438)
T ss_pred Hc----------------------------CCh-HHHHHHHHHHHHHHHHHHHHHHHHHcccchhhc-----cchhHH--
Confidence 32 011 124556778999999999999999999875321 233332
Q ss_pred HHHHHHHHHHHHHHHHHhhhcch-hhHHHHHHHHHHHHHHHH
Q 016902 235 YLSVTVGAIVAFTLVVYIQMEHG-WGSAFGALAIAMGISNML 275 (380)
Q Consensus 235 ~~~~~iG~~i~~~i~~~i~~~~g-w~~~f~i~~~~~~~~~i~ 275 (380)
.. ..+|+.+++.+.+++.+..| -+..|+++.++.++.++.
T Consensus 388 ~~-~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~~~~ 428 (438)
T PRK10133 388 VM-TIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFIF 428 (438)
T ss_pred hH-HhccchHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHH
Confidence 22 33577788888899988887 788888777766554443
No 158
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.12 E-value=1e-08 Score=100.71 Aligned_cols=171 Identities=6% Similarity=-0.090 Sum_probs=115.7
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHH
Q 016902 74 IFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFL-GISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTG 152 (380)
Q Consensus 74 i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~-~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~ 152 (380)
.+...++...+.....++.+.|+.+ .|++..+.+.+..... ....++.+++|+++||+ |+++.+.++.++..+..+.
T Consensus 213 ~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~-g~~~~l~~~~~~~~~~~~~ 290 (390)
T TIGR02718 213 LLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRA-GLWRTFILGVGLAGSLALL 290 (390)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHH
Confidence 3334445555555566667778864 7999999998877765 45566788999999998 9999988877665333222
Q ss_pred HHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCC-CCchhhhhhhhHH
Q 016902 153 ITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDE-RSKDYKTHLDRFF 231 (380)
Q Consensus 153 l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~-~~~~~~~~r~~~~ 231 (380)
...... ... . .....++....+.+++.|...+...+...+..++ +. +++.+
T Consensus 291 ~~~~~~-~~~-~--------------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~------~g~~~ 342 (390)
T TIGR02718 291 WFAQAA-FWL-A--------------------PGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQ------AGTDV 342 (390)
T ss_pred HHHHHH-ccc-C--------------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccc------hHHHH
Confidence 221110 000 0 1122233333444555666666666776666665 44 89999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHH
Q 016902 232 NFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNM 274 (380)
Q Consensus 232 ~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i 274 (380)
++++...++|..+++.+++++.+..||+..|.+.+++.+++++
T Consensus 343 ~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 343 TAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999988999888877766655543
No 159
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.11 E-value=7.3e-09 Score=104.74 Aligned_cols=179 Identities=9% Similarity=0.005 Sum_probs=117.6
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH----hhcchh-HHHHHHHHHHHHH
Q 016902 75 FGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLAD----AYLGRY-WTIAIFTTIYLAG 149 (380)
Q Consensus 75 ~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD----~~~GR~-~~i~i~~~l~~lg 149 (380)
.+..+..++.+..+..+++.|+++.+|++...++.+..+.-+.-.+..++.|+++| || ||| +.++++.+...++
T Consensus 12 g~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~-Grrrp~il~g~i~~~i~ 90 (473)
T PRK10429 12 GFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRW-GKFKPWILIGTLANSVV 90 (473)
T ss_pred ccchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCC-CCcchhHhhhhHHHHHH
Confidence 34455566777777788999999999999999999999999999999999999999 65 995 5555666666666
Q ss_pred HHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhh
Q 016902 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (380)
Q Consensus 150 ~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~ 229 (380)
++++... |.+ + .......+++...+..++......+..++++|+.++.+ | |.+
T Consensus 91 ~~llf~~---p~~-~------------------~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~--e---R~~ 143 (473)
T PRK10429 91 LFLLFSA---HLF-E------------------GTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKR--E---REQ 143 (473)
T ss_pred HHHHHcC---CCC-C------------------ccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHH--H---HHH
Confidence 5555431 111 0 01233444445556677777788888899999885422 2 788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhh-------cchhhHHHHHHHHHHHHHHHHHHhhcc
Q 016902 230 FFNFFYLSVTVGAIVAFTLVVYIQM-------EHGWGSAFGALAIAMGISNMLFFIGTP 281 (380)
Q Consensus 230 ~~~~~~~~~~iG~~i~~~i~~~i~~-------~~gw~~~f~i~~~~~~~~~i~~~~~~~ 281 (380)
.+++-.+..++|+.+.+.+...+.. ..+|++...+.+++.++..++.+...|
T Consensus 144 l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~ 202 (473)
T PRK10429 144 LVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLRNVH 202 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCce
Confidence 7777566666665555444332211 124666666655555554444444333
No 160
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.10 E-value=3.7e-09 Score=107.54 Aligned_cols=153 Identities=13% Similarity=0.055 Sum_probs=122.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHH
Q 016902 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (380)
Q Consensus 71 ~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~ 150 (380)
.....+..++..+.+++...+++.|++..+|++..+++.....+.++..++.+++|+++||+ |||+.+..+.++..++.
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~g~~~~~~~~ 339 (495)
T PRK14995 261 ILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRL-GLRLVATGGMALSALSF 339 (495)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHHH
Confidence 44445556666667777778889999999999999999999999999999999999999998 99999888888887777
Q ss_pred HHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhH
Q 016902 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (380)
Q Consensus 151 ~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~ 230 (380)
+++..... . .+....++..++.|+|.|...+.......+..|+++ ++..
T Consensus 340 ~~l~~~~~------~-------------------~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~------~g~~ 388 (495)
T PRK14995 340 YGLAMTDF------S-------------------TQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEK------AAAA 388 (495)
T ss_pred HHHHHhcC------C-------------------CchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHh------cchH
Confidence 66544210 0 123344566778899998888888888888888776 8999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhc
Q 016902 231 FNFFYLSVTVGAIVAFTLVVYIQME 255 (380)
Q Consensus 231 ~~~~~~~~~iG~~i~~~i~~~i~~~ 255 (380)
.+++++..++|..+|+.+.+.+.++
T Consensus 389 ~~~~~~~~~lG~~~G~ai~g~i~~~ 413 (495)
T PRK14995 389 GAIETMAYELGAGLGIAIFGLLLSR 413 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998887653
No 161
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.10 E-value=5.4e-09 Score=116.48 Aligned_cols=160 Identities=11% Similarity=-0.014 Sum_probs=122.1
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHH
Q 016902 74 IFGNEMAERMAYFGLSVNMVTFMFYVMHKSFA-DSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTG 152 (380)
Q Consensus 74 i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~-~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~ 152 (380)
.++..++..+..+.+..+++.|+.+.+|++.. ..+++.+...++..++.+++|+++|++ ++++.+.++.++..++.++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~~~~~~ 315 (1146)
T PRK08633 237 AIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRH-IELGLVPLGALGLALSLFL 315 (1146)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eEccchhHHHHHHHHHHHH
Confidence 33333444444555667789999999999988 888898889999999999999999997 9998888887777776666
Q ss_pred HHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHH
Q 016902 153 ITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFN 232 (380)
Q Consensus 153 l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~ 232 (380)
+.+. .+...++++.++.|++.++..+...+++.+.+|++. |+++++
T Consensus 316 ~~~~----------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------rg~~~~ 361 (1146)
T PRK08633 316 LPTA----------------------------PSLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKE------LGKVLA 361 (1146)
T ss_pred HHHh----------------------------hhHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccc------hhhhhH
Confidence 5543 234556667788889988888888999999999888 999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhh-cchhhHHHHHHHHH
Q 016902 233 FFYLSVTVGAIVAFTLVVYIQM-EHGWGSAFGALAIA 268 (380)
Q Consensus 233 ~~~~~~~iG~~i~~~i~~~i~~-~~gw~~~f~i~~~~ 268 (380)
++++..++|.++++.+++.+.. ..++...|++.+++
T Consensus 362 ~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 398 (1146)
T PRK08633 362 ANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALV 398 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 9999999998888777666543 23455555544443
No 162
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.09 E-value=1.2e-08 Score=102.04 Aligned_cols=183 Identities=14% Similarity=0.024 Sum_probs=123.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHH
Q 016902 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (380)
Q Consensus 71 ~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~ 150 (380)
.|.+.+..++....|.++..+++.|+++.+. .........+..+...++.+++|+||||+ |++++++++.++..++.
T Consensus 254 ~Wllslly~~tFG~fvg~s~~lp~~~~~~~~--~~~~l~~~~l~~l~~~l~rplgG~LADRi-G~~~vl~~~~i~~~i~~ 330 (462)
T PRK15034 254 LWLLSLLYLATFGSFIGFSAGFAMLAKTQFP--DVNILRLAFFGPFIGAIARSVGGAISDKF-GGVRVTLINFIFMAIFS 330 (462)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--hHHHHHHHHHHHHHHHHHHHhhHHHHHhc-CchHHHHHHHHHHHHHH
Confidence 5667777777666777777788999887663 33333334455677888889999999997 99999999988777766
Q ss_pred HHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCC----------C
Q 016902 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDER----------S 220 (380)
Q Consensus 151 ~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~----------~ 220 (380)
.++.+.. |. ....+...+.++.+.+.++.|...+.+..++.+.||++ +
T Consensus 331 ~~~~l~l------p~----------------~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~ 388 (462)
T PRK15034 331 ALLFLTL------PG----------------TGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGS 388 (462)
T ss_pred HHHHHHh------cc----------------ccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccc
Confidence 5443321 11 00134555555555555666666666777777777630 0
Q ss_pred -----chhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcch-hhHHHHHHHHHHHHHHHHHHh
Q 016902 221 -----KDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHG-WGSAFGALAIAMGISNMLFFI 278 (380)
Q Consensus 221 -----~~~~~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~~~g-w~~~f~i~~~~~~~~~i~~~~ 278 (380)
...+++-+...++......+|+++-|.+.++..+..| +..+|++..+..++++++.+.
T Consensus 389 ~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~ 452 (462)
T PRK15034 389 DEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWL 452 (462)
T ss_pred hhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHH
Confidence 1112346778888888888988898988777766554 888888888877777666544
No 163
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.08 E-value=1.9e-08 Score=100.06 Aligned_cols=160 Identities=14% Similarity=0.005 Sum_probs=104.1
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcch-hHHHHHHHHHHHHHHH
Q 016902 73 FIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGR-YWTIAIFTTIYLAGLT 151 (380)
Q Consensus 73 ~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR-~~~i~i~~~l~~lg~~ 151 (380)
.+.+..++...++-...+.++.|+++++|++..+.+++.+.+.++..++++++|.++||+ || |+++.++.++..++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~-g~~r~~~~~~~~~~~~~~~ 84 (418)
T TIGR00889 6 KLKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKW-LSAQKVYAVCHFAGALLLF 84 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccHHHHHHHHHHHHHHHH
Confidence 344555555555555668899999999999999999999999999999999999999997 65 7777777776666555
Q ss_pred HHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhh--------ccCCCCCchh
Q 016902 152 GITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGA--------DQFDERSKDY 223 (380)
Q Consensus 152 ~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~a--------d~f~~~~~~~ 223 (380)
+..+. .+...+++.+.+.+++.+...+...+... |......
T Consensus 85 ~~~~~----------------------------~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~--- 133 (418)
T TIGR00889 85 FAAQV----------------------------TTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFP--- 133 (418)
T ss_pred HHHHh----------------------------cCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCC---
Confidence 54442 23455566666777766555544433321 2111111
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHH
Q 016902 224 KTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNM 274 (380)
Q Consensus 224 ~~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i 274 (380)
|.+.++ .+|..+++.+++++.....|. .|++.+++.++..+
T Consensus 134 ---~~r~~G------~lG~~ig~~l~g~l~~~~~~~-~f~~~~~~~~~~~~ 174 (418)
T TIGR00889 134 ---PIRVMG------TIGFIAAMWAVSLLDIELSNI-QLYITAGSSALLGV 174 (418)
T ss_pred ---Ceeeeh------hHHHHHHHHHHHHhcccchhH-HHHHHHHHHHHHHH
Confidence 333332 367788888888774333344 35555554444443
No 164
>PRK11462 putative transporter; Provisional
Probab=99.07 E-value=2.4e-08 Score=100.68 Aligned_cols=208 Identities=10% Similarity=0.043 Sum_probs=134.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---cchhHHHH-HHHHHHH
Q 016902 72 LFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAY---LGRYWTIA-IFTTIYL 147 (380)
Q Consensus 72 ~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~---~GR~~~i~-i~~~l~~ 147 (380)
+.-.+..+..++.+..+..++..|.++.+|++...++.+..+.-+.-.+.-++.|.++||. +||||..+ ++.+...
T Consensus 12 ~~Yg~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~ 91 (460)
T PRK11462 12 IGYGMGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFG 91 (460)
T ss_pred HhhccchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHH
Confidence 3333455555666666777899999999999999999999999999999999999999963 59976555 4556666
Q ss_pred HHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhh
Q 016902 148 AGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHL 227 (380)
Q Consensus 148 lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r 227 (380)
++.+++... |...+ ......+++...+..++......+..++.+|+.++.+ | |
T Consensus 92 i~~~llf~~---p~~s~-------------------~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~--e---R 144 (460)
T PRK11462 92 IVCVLAYST---PDLSM-------------------NGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPT--Q---R 144 (460)
T ss_pred HHHHHHHhC---CCCCc-------------------chHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHH--H---H
Confidence 666555432 11100 1234445555556677888888888899999987533 2 8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhc-------chhhHHHHHHHHHHHHHHHHHHhhcccccccCCCCCccchHHHHH
Q 016902 228 DRFFNFFYLSVTVGAIVAFTLVVYIQME-------HGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVL 300 (380)
Q Consensus 228 ~~~~~~~~~~~~iG~~i~~~i~~~i~~~-------~gw~~~f~i~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~ 300 (380)
.+..++..+..++|..+++.+...+... .||.....+.+++..++.++.+...++..+.+++..+ +.+.+
T Consensus 145 t~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~i~~~~~kE~~~~~~~~~~---~~~~l 221 (460)
T PRK11462 145 ISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCFFTTKERVEAPPTTTS---MREDL 221 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHhcceeccCCCccCCC---HHHHH
Confidence 8899998888888877776665443322 2566666665555555544444433332222211122 44455
Q ss_pred HHHHhhccc
Q 016902 301 VAAFRKRHA 309 (380)
Q Consensus 301 ~~a~~~r~~ 309 (380)
...+|||..
T Consensus 222 ~~~~~Nk~~ 230 (460)
T PRK11462 222 RDIWQNDQW 230 (460)
T ss_pred HHHhCChHH
Confidence 555565543
No 165
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.07 E-value=3.5e-08 Score=97.45 Aligned_cols=153 Identities=15% Similarity=0.209 Sum_probs=101.6
Q ss_pred hHHHHHHHhcCCCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCcc
Q 016902 91 NMVTFMFYVMHKSFADSSNAVNNF-LGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNC 169 (380)
Q Consensus 91 ~l~~yl~~~~~~s~~~a~~~~~~~-~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~~~~~c 169 (380)
+.+.|+.+++|++..+.+.+.... .++..++.+++|+++||+ ||++.+.++.++..+..+.+.+.+.. +
T Consensus 231 ~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~-g~~~~l~~~~~~~~l~~l~~~~~~~~----~----- 300 (402)
T PRK11902 231 LSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRL-GLYRSLMLFGVLQAVSNLGYWVLAVT----P----- 300 (402)
T ss_pred HHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHHHhc----C-----
Confidence 345577778999998888877654 445788899999999998 99998877776665554443322110 0
Q ss_pred cccccccCCCCCCcchhHHHHHHHH----HHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHH
Q 016902 170 DRISQLLGSCEPAKSWQMLYLYTVL----YITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVA 245 (380)
Q Consensus 170 ~~~~~~~~~c~~~~~~~~~~l~~~l----~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~ 245 (380)
.+...++++. ++.+++.+...+....+..+.+|.++ . +++.....+|..++
T Consensus 301 ---------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~----~~~~~~~~l~~~~~ 355 (402)
T PRK11902 301 ---------------KHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQ------Y----ALLSALASVGRVYV 355 (402)
T ss_pred ---------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHH------H----HHHHHHHHHHHHHH
Confidence 1223333333 34556666667777777777776433 3 33333445666655
Q ss_pred HHHHHHhhhcchhhHHHHHHHHHHHHHHHHHHh
Q 016902 246 FTLVVYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (380)
Q Consensus 246 ~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~~~~ 278 (380)
..+++++.+..||+..|.+.+++.++++++.+.
T Consensus 356 ~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~~ 388 (402)
T PRK11902 356 GPTSGYLVEAYGWPGFYLMTVVIALPGLALLWL 388 (402)
T ss_pred HHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH
Confidence 668899999999999999888877776655433
No 166
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.06 E-value=5.8e-09 Score=101.01 Aligned_cols=166 Identities=14% Similarity=0.098 Sum_probs=132.6
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhh
Q 016902 77 NEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLC 156 (380)
Q Consensus 77 ~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~ 156 (380)
..++-+=...++.+....|...++|++..+...+....+..+.++++++|+|.||+ |-|+++.++.+++.+..+.....
T Consensus 260 A~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rf-g~k~vl~~~lvi~~~~~~~~~~~ 338 (438)
T COG2270 260 ARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERF-GSKPVLMIGLVILSIAALYLIFL 338 (438)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCceeehHHHHHHHHHHHHHHHc
Confidence 33333333345667778899999999999999999999999999999999999997 99999999988877766555442
Q ss_pred hhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHH
Q 016902 157 ATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYL 236 (380)
Q Consensus 157 ~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~ 236 (380)
.....+++.-.++|+..|+.++..=++.+...|+++ -+.+|++|.+
T Consensus 339 ----------------------------~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k------~~~fFglyal 384 (438)
T COG2270 339 ----------------------------EGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGK------EGRFFGLYAL 384 (438)
T ss_pred ----------------------------cccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCcc------ccceeehhhh
Confidence 122334555567899999999999999999999887 7999999999
Q ss_pred HHHHHHHHHHHHHHHhhhcch-hhHHHHHHHHHHHHHHHHHH
Q 016902 237 SVTVGAIVAFTLVVYIQMEHG-WGSAFGALAIAMGISNMLFF 277 (380)
Q Consensus 237 ~~~iG~~i~~~i~~~i~~~~g-w~~~f~i~~~~~~~~~i~~~ 277 (380)
....++++||...+.+.+..| -|.++....++..+++++++
T Consensus 385 tgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~ 426 (438)
T COG2270 385 TGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLL 426 (438)
T ss_pred hhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEE
Confidence 999999999999998877665 67777766666666665543
No 167
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.05 E-value=1.8e-08 Score=102.80 Aligned_cols=165 Identities=10% Similarity=0.044 Sum_probs=133.7
Q ss_pred HHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhh
Q 016902 78 EMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCA 157 (380)
Q Consensus 78 ~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~ 157 (380)
.++..+....+...+|.+..+.+|.+....+.+.+.+.++..++.++.+.+.+++ ++.+.+..+.+++.++++.++++
T Consensus 227 ~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~-~~~~lv~~~~~~~a~~~~~lal~- 304 (524)
T PF05977_consen 227 SFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRL-SSRRLVLLASLLFALALLLLALS- 304 (524)
T ss_pred HHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccc-CcchhhHHHHHHHHHHHHHHhcc-
Confidence 3333344444555678888889999999999999999999999999999999987 99898888888887777776664
Q ss_pred hcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHH
Q 016902 158 TMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLS 237 (380)
Q Consensus 158 ~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~ 237 (380)
.+....++++++.|++.........+..-...|++. ||+.+++|+..
T Consensus 305 ---------------------------~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~------~GRv~si~~~~ 351 (524)
T PF05977_consen 305 ---------------------------PSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWV------RGRVFSIYQMV 351 (524)
T ss_pred ---------------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HhHHHHHHHHH
Confidence 345666777788888888877778888888888777 99999999999
Q ss_pred HHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHH
Q 016902 238 VTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFF 277 (380)
Q Consensus 238 ~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~~~ 277 (380)
...+..+|..+.|++.+.+|-+..+.+.+++++++.++..
T Consensus 352 ~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~ 391 (524)
T PF05977_consen 352 FFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIAL 391 (524)
T ss_pred HHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999988888877776666555543
No 168
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.04 E-value=5.9e-08 Score=95.75 Aligned_cols=165 Identities=10% Similarity=-0.001 Sum_probs=111.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHH
Q 016902 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (380)
Q Consensus 71 ~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~ 150 (380)
++..+...++.....++..+++++++.+++|++....+.....+.++..++.++.+++.||. +|+ .++++.++..+..
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~-~~~-~l~~~~~~~~~~~ 295 (394)
T PRK10213 218 VMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRS-VKL-ALAGAPLVLAVSA 295 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhcc-chh-HHHHHHHHHHHHH
Confidence 34333344444455555556665555568899998889888888888999999999999985 544 4333433333332
Q ss_pred HHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhH
Q 016902 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (380)
Q Consensus 151 ~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~ 230 (380)
.++.... .+...+++..++.|++.+...+...+++.+..|++ .+..
T Consensus 296 ~~l~~~~---------------------------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~-------~~~~ 341 (394)
T PRK10213 296 LVLTLWG---------------------------SDKIVATGVAIIWGLTFALVPVGWSTWITRSLADQ-------AEKA 341 (394)
T ss_pred HHHHHHh---------------------------hhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCccc-------HHHH
Confidence 2222210 13445556677788888888888888888877632 3455
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHH
Q 016902 231 FNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGI 271 (380)
Q Consensus 231 ~~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~ 271 (380)
.++++...++|..+|+.++|++.+..|+...+...+++.++
T Consensus 342 ~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~ 382 (394)
T PRK10213 342 GSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLL 382 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHH
Confidence 56666677889999999999999988888777776554433
No 169
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.04 E-value=2.8e-09 Score=108.27 Aligned_cols=174 Identities=15% Similarity=0.083 Sum_probs=139.6
Q ss_pred HHHHHHHHHHHHHHHHHHH---hHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHH
Q 016902 72 LFIFGNEMAERMAYFGLSV---NMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLA 148 (380)
Q Consensus 72 ~~i~~~~~~~~~~~~~i~~---~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~l 148 (380)
|.+.+..|+.++..+|+.. .+...++++++.+..+.+++.++..++..+..++.+.+.||| |.|.+++++.++..+
T Consensus 45 WvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rf-g~R~v~i~G~~v~~~ 123 (509)
T KOG2504|consen 45 WVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRF-GCRTVMIAGGLVAAL 123 (509)
T ss_pred eeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhc-CchHHHHHHHHHHHH
Confidence 5566666666666666443 245667889999999999999999999999999999999998 999999999999999
Q ss_pred HHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHH-HHHHHhccchhhhhhhHhhccCCCCCchhhhhh
Q 016902 149 GLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVL-YITGFGAAGIRPCVSSFGADQFDERSKDYKTHL 227 (380)
Q Consensus 149 g~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l-~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r 227 (380)
|+++..++ .+.+.+++.. ++.|+|.|.........+...|+.+ |
T Consensus 124 g~~lssF~----------------------------~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~kk-------R 168 (509)
T KOG2504|consen 124 GLLLSSFA----------------------------TSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEKK-------R 168 (509)
T ss_pred HHHHHHHH----------------------------hhHHHHHHHHHHHhhccchhhhcchhhhhhhHhHHH-------H
Confidence 99988876 3566666666 6789999999888888888777632 7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHHhhcc
Q 016902 228 DRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTP 281 (380)
Q Consensus 228 ~~~~~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~~~~~~~ 281 (380)
+.+.++-..+..+|..+-|.+..++.+++|||+.+++...+++-.++.-...+|
T Consensus 169 ~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp 222 (509)
T KOG2504|consen 169 ALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRP 222 (509)
T ss_pred HHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCC
Confidence 777777777788888888888899999999999999887777555554444444
No 170
>PRK09848 glucuronide transporter; Provisional
Probab=99.03 E-value=1.9e-08 Score=100.86 Aligned_cols=161 Identities=14% Similarity=0.109 Sum_probs=115.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHH
Q 016902 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (380)
Q Consensus 71 ~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~ 150 (380)
+....+..++...+++......+.|++..+|.+....+.......++..++.++.++++||+ |+|+++.++.++..++.
T Consensus 230 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~-g~~~~~~~g~~~~~i~~ 308 (448)
T PRK09848 230 LFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARI-GKKNTFLIGALLGTCGY 308 (448)
T ss_pred HHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHH
Confidence 44455555555566665656666777778888766555544444566677888999999998 99999999998888887
Q ss_pred HHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCch-hhhhhhh
Q 016902 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKD-YKTHLDR 229 (380)
Q Consensus 151 ~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~-~~~~r~~ 229 (380)
+++.+. +. .+...+++..++.++|.+...+...++.+|..|.++-+ .++..+.
T Consensus 309 ~~~~~~-------~~-------------------~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~ 362 (448)
T PRK09848 309 LLFFWV-------SV-------------------WSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGL 362 (448)
T ss_pred HHHHHc-------Cc-------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhH
Confidence 766542 10 23455666777889999999999999999988754311 1123588
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcchh
Q 016902 230 FFNFFYLSVTVGAIVAFTLVVYIQMEHGW 258 (380)
Q Consensus 230 ~~~~~~~~~~iG~~i~~~i~~~i~~~~gw 258 (380)
+++.+.+...+|..+++.+.+++.+..||
T Consensus 363 ~~~~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 363 TYSLFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 88899999999999999888877554443
No 171
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.03 E-value=1.6e-08 Score=97.94 Aligned_cols=152 Identities=15% Similarity=0.083 Sum_probs=112.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHH
Q 016902 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (380)
Q Consensus 71 ~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~ 150 (380)
.+.+.+..++....++++..+++.|+++ +|++....+...+.+.++..++.++.|+++||+-+||+++.++.++..++.
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 277 (355)
T TIGR00896 199 AWQVTVFFGLQSGLYYSLIGWLPAILIS-HGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGL 277 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHH
Confidence 4444445555667777788888999874 799999999999999999999999999999997345667777777777776
Q ss_pred HHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhH
Q 016902 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (380)
Q Consensus 151 ~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~ 230 (380)
+++.... .+... ...++.|+|.|...+...+...+..++++ +++..
T Consensus 278 ~~~~~~~---------------------------~~~~~--~~~~l~g~~~g~~~~~~~~~~~~~~~~~~-----~~g~~ 323 (355)
T TIGR00896 278 CGLLFAP---------------------------MHGLW--AWALVLGLGQGGAFPLALTLIGLRSRQAA-----QAAAL 323 (355)
T ss_pred HHHHHhh---------------------------hhHHH--HHHHHHHHhhhhHhHHHHHHHHHhccCHH-----HHHHH
Confidence 6555421 11111 13456788888888877777766655322 16777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcch
Q 016902 231 FNFFYLSVTVGAIVAFTLVVYIQMEHG 257 (380)
Q Consensus 231 ~~~~~~~~~iG~~i~~~i~~~i~~~~g 257 (380)
+++.+....+|..++|.+.+++.+..|
T Consensus 324 ~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 324 SAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 888787888888999999999988765
No 172
>PRK10054 putative transporter; Provisional
Probab=99.03 E-value=1.2e-08 Score=100.68 Aligned_cols=171 Identities=12% Similarity=-0.004 Sum_probs=118.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHH
Q 016902 72 LFIFGNEMAERMAYFGLSVNMVTFMFYV--MHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (380)
Q Consensus 72 ~~i~~~~~~~~~~~~~i~~~l~~yl~~~--~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg 149 (380)
+...+..++..+.+.....+++.|+... .+.+....+.......+.......+.|.+.|++ |+|+.+.++.++..++
T Consensus 209 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~l~~~~~~~~~~ 287 (395)
T PRK10054 209 LWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAA-NIRPLMTAGTLCFVIG 287 (395)
T ss_pred hHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccC-CchhHHHHHHHHHHHH
Confidence 3333444444444444445666676543 344444555666666555556667788999997 9999998888888887
Q ss_pred HHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhh
Q 016902 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (380)
Q Consensus 150 ~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~ 229 (380)
.+++.+.. .+...++++..+.++|.+...+....++.+..|++. +++
T Consensus 288 ~~~~~~~~---------------------------~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~------~~~ 334 (395)
T PRK10054 288 LVGFIFSG---------------------------NSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGM------KAS 334 (395)
T ss_pred HHHHHHcc---------------------------hHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCccc------cee
Confidence 76665421 134445566778888888777888888899888776 788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHH
Q 016902 230 FFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFF 277 (380)
Q Consensus 230 ~~~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~~~ 277 (380)
+++.+. ...+|..+||.+++++.+..|....|++.+++..++.++..
T Consensus 335 ~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~ 381 (395)
T PRK10054 335 YFSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAWLLML 381 (395)
T ss_pred hHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHHH
Confidence 887654 55689999999999999999988888876666555554443
No 173
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.02 E-value=2.2e-08 Score=99.00 Aligned_cols=154 Identities=11% Similarity=0.028 Sum_probs=104.8
Q ss_pred HHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCC
Q 016902 88 LSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQD 167 (380)
Q Consensus 88 i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~~~~ 167 (380)
+...++.|+++..+ +....+...+...++...+....+.+.|+.++.++.+..+.++..++.+++...
T Consensus 227 ~~~~~p~~~~~~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~----------- 294 (400)
T PRK11646 227 VMLMLPIMVNDIAG-SPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMV----------- 294 (400)
T ss_pred HHHhhhhhHHhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHh-----------
Confidence 44567788876656 556666666665555544444456666654476667777777777776655543
Q ss_pred cccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHH
Q 016902 168 NCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFT 247 (380)
Q Consensus 168 ~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~ 247 (380)
.+...+++...+.++|.+...+...++..+..|++. |++.++++++...+|..+||.
T Consensus 295 -----------------~~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~------~g~~~g~~~~~~~~g~~ig~~ 351 (400)
T PRK11646 295 -----------------SNLQQLFTLICLFYIGSIIAEPARETLSASLADARA------RGSYMGFSRLGLALGGAIGYI 351 (400)
T ss_pred -----------------hhHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCccc------chhhhhHHHHHHHHHHHhccc
Confidence 223444555566777877777888899999999877 999999999999999999999
Q ss_pred HHHHhhhcc---h-hhHHHHHHHHHHHHHHHHH
Q 016902 248 LVVYIQMEH---G-WGSAFGALAIAMGISNMLF 276 (380)
Q Consensus 248 i~~~i~~~~---g-w~~~f~i~~~~~~~~~i~~ 276 (380)
+.+++.+.. + ....|++..++.+++.+.+
T Consensus 352 l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (400)
T PRK11646 352 GGGWLFDLGKALNQPELPWMMLGIIGLITLLAL 384 (400)
T ss_pred chHHHHHHHhhcCCcchHHHHHHHHHHHHHHHH
Confidence 999998764 2 2445555444444444443
No 174
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.01 E-value=6.9e-08 Score=94.81 Aligned_cols=177 Identities=11% Similarity=-0.024 Sum_probs=112.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHH--HHHHHHHHHHHH-HHHHHHHHhhcchhHHHHHHHHHHH
Q 016902 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNA--VNNFLGISQASS-VLGGFLADAYLGRYWTIAIFTTIYL 147 (380)
Q Consensus 71 ~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~--~~~~~~~~~~~~-l~~g~lsD~~~GR~~~i~i~~~l~~ 147 (380)
...+....+.+.+.+..+...++.|++ +.|++..+.+.. .........+.. ++.++++||+ ||||.+++...+..
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~-~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~-g~r~~~i~~~~~~~ 80 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLR-EDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRL-GRRRSWVLPMQCLV 80 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccC-CcchhHHHHHHHHH
Confidence 445556677777777666677777775 669999998886 344444444444 4446688886 99998766653322
Q ss_pred H-HHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhh
Q 016902 148 A-GLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTH 226 (380)
Q Consensus 148 l-g~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~ 226 (380)
. ....+... .+. . .....+....++.++..+...+..-++..|..+++.
T Consensus 81 ~~~~~~~~~~--~~~--~--------------------~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~------ 130 (390)
T TIGR02718 81 SACLASLALV--GPD--V--------------------AGAGWAVGLLACASLASATQDIATDGMAAEHFNGRT------ 130 (390)
T ss_pred HHHHHHHHcC--Ccc--h--------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhh------
Confidence 2 12222211 000 0 112233333444555666666666666666666544
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHHhh
Q 016902 227 LDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIG 279 (380)
Q Consensus 227 r~~~~~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~~~~~ 279 (380)
++.+.+.+.++..+|..++..+.+++.+..||+..|++.+++.++..+..+..
T Consensus 131 ~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~~ 183 (390)
T TIGR02718 131 LAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLWL 183 (390)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHc
Confidence 66677777888889999999888999999999999998888776655554443
No 175
>TIGR00898 2A0119 cation transport protein.
Probab=99.00 E-value=1.5e-08 Score=102.89 Aligned_cols=130 Identities=14% Similarity=0.050 Sum_probs=93.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHH
Q 016902 113 NFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYT 192 (380)
Q Consensus 113 ~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~ 192 (380)
...+....+.+++++++||+ |||+.+.++.++..++.+++.+.. . ......++
T Consensus 363 ~~~~~~i~~~~~~~~l~dr~-grr~~~~~~~~~~~~~~l~~~~~~-------~-------------------~~~~~~~~ 415 (505)
T TIGR00898 363 ISGLVELPAKLITLLLIDRL-GRRYTMAASLLLAGVALLLLLFVP-------V-------------------DLYFLRTA 415 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHcC-------C-------------------CchHHHHH
Confidence 34455667788899999997 999999998887777766555421 0 11122333
Q ss_pred HHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHH
Q 016902 193 VLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGIS 272 (380)
Q Consensus 193 ~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~ 272 (380)
..++.+++.++..+....+.+|.+|++. |++++++.+....+|+.++|.+.+ +. ..++...+++.+++.+++
T Consensus 416 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~------r~~~~g~~~~~~~ig~~i~p~i~~-~~-~~~~~~~~~~~~~~~~~~ 487 (505)
T TIGR00898 416 LAVLGKFGITSAFQMVYLYTAELYPTVV------RNLGVGVCSTMARVGSIISPFLVY-LG-EKWLFLPLVLFGGLALLA 487 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccHHH------HhhhHhHHHHHHHHHHHHHhHHHH-HH-HHHHhhHHHHHHHHHHHH
Confidence 4445556666677788899999999887 999999999999999999999888 43 345666777766666555
Q ss_pred HHHHH
Q 016902 273 NMLFF 277 (380)
Q Consensus 273 ~i~~~ 277 (380)
.++.+
T Consensus 488 ~~~~~ 492 (505)
T TIGR00898 488 GILTL 492 (505)
T ss_pred HHHHH
Confidence 44443
No 176
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.99 E-value=8.2e-08 Score=91.34 Aligned_cols=174 Identities=18% Similarity=0.153 Sum_probs=142.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHH
Q 016902 68 WIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYL 147 (380)
Q Consensus 68 ~~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~ 147 (380)
|-.+..++++.+--+-...++. .+..-+.+++|++.+.++.+.++..+...+..++..+|+-|+ |-.+.+.++.++..
T Consensus 11 ~~li~gIvlia~NLR~~itsvg-PLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~-g~er~l~~~Llli~ 88 (395)
T COG2807 11 LLLLAGIVLIAFNLRPAITSVG-PLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRF-GEERSLFLALLLIA 88 (395)
T ss_pred hHHHHHHHHHHhccchhhhhhh-hhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hhHHHHHHHHHHHH
Confidence 4445555555555566665454 466788999999999999999999999999999999999997 99999999998888
Q ss_pred HHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhh
Q 016902 148 AGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHL 227 (380)
Q Consensus 148 lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r 227 (380)
+|.++=.. .+...++.+-.+.|.|.+......++++-+-||.+ .
T Consensus 89 ~G~~iR~~-----------------------------~~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~-------~ 132 (395)
T COG2807 89 AGILIRSL-----------------------------GGLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKR-------V 132 (395)
T ss_pred HHHHHHhc-----------------------------ccHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccc-------h
Confidence 88766443 23566888889999999999999999999999965 4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhcc-hhhHHHHHHHHHHHHHHHHHHhh
Q 016902 228 DRFFNFFYLSVTVGAIVAFTLVVYIQMEH-GWGSAFGALAIAMGISNMLFFIG 279 (380)
Q Consensus 228 ~~~~~~~~~~~~iG~~i~~~i~~~i~~~~-gw~~~f~i~~~~~~~~~i~~~~~ 279 (380)
+...+.|..+.++|+.+++.+...+.++. ||+....+=+...++++++.+-.
T Consensus 133 ~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~WlPq 185 (395)
T COG2807 133 GLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWLPQ 185 (395)
T ss_pred hhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHhhh
Confidence 88889999999999999999999887766 79998887777777777665544
No 177
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.99 E-value=2.5e-09 Score=106.55 Aligned_cols=178 Identities=14% Similarity=0.073 Sum_probs=125.9
Q ss_pred HHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH----hhcchhHHHH-HHHHHHHHHHHHH
Q 016902 79 MAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLAD----AYLGRYWTIA-IFTTIYLAGLTGI 153 (380)
Q Consensus 79 ~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD----~~~GR~~~i~-i~~~l~~lg~~~l 153 (380)
+...+.+.....+++.|+++.+|+++...+.+..+..+...+.-++.|.++| |+ ||||..+ ++.++..++.+++
T Consensus 11 ~~~~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~-Grrrp~~l~g~i~~~~~~~ll 89 (428)
T PF13347_consen 11 LGYNMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRW-GRRRPWILIGAILLALSFFLL 89 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccc-cccceEeehhhHHHHHHHHHh
Confidence 4455555556678899999999999999999999999999999999999999 66 9876554 5677777777666
Q ss_pred HhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHH
Q 016902 154 TLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNF 233 (380)
Q Consensus 154 ~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~ 233 (380)
.... |. ..+.......+++..++..++......+..++++|..++.+ +|....++
T Consensus 90 f~~~------p~--------------~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~-----~R~~l~~~ 144 (428)
T PF13347_consen 90 FSPP------PA--------------GLSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPD-----ERTRLSSW 144 (428)
T ss_pred hccc------cc--------------hhhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHh-----hhhhHHHH
Confidence 5420 00 00000233445666666788888888999999999988643 27888888
Q ss_pred HHHHHHHHHHHHHHHHHHhh----hc---chhhHHHHHHHHHHHHHHHHHHhhccc
Q 016902 234 FYLSVTVGAIVAFTLVVYIQ----ME---HGWGSAFGALAIAMGISNMLFFIGTPL 282 (380)
Q Consensus 234 ~~~~~~iG~~i~~~i~~~i~----~~---~gw~~~f~i~~~~~~~~~i~~~~~~~~ 282 (380)
-.+...+|.++...+.+.+. +. .+|++.+.+.+++.++..++.+...|+
T Consensus 145 ~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke 200 (428)
T PF13347_consen 145 RMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKE 200 (428)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeee
Confidence 77777777765444444332 21 168888888777777776666666555
No 178
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.98 E-value=1.9e-08 Score=112.15 Aligned_cols=183 Identities=6% Similarity=-0.167 Sum_probs=125.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHH
Q 016902 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (380)
Q Consensus 71 ~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~ 150 (380)
++..++..++..+.++++.++++.|+.+.+|.+...++.+.+.+.++..++.++.|+++|++ ++++.+.++.++..++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~-~~~~~~~~~~~~~~~~~ 305 (1140)
T PRK06814 227 IWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGR-ITLLYVPIGALLMGLFG 305 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eeeeeehHHHHHHHHHH
Confidence 44555555555666667778899999999999999999999999999999999999999987 66665555554444444
Q ss_pred HHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhH
Q 016902 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (380)
Q Consensus 151 ~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~ 230 (380)
+.+.+... ....+....+. ..+... ..+...++++.+++|++.+...+...+++.+.+|++. +++.
T Consensus 306 ~~l~~~~~-~~~~~~~~~~~------~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~G~v 371 (1140)
T PRK06814 306 LDLAFASS-SVPAEPAQLKS------ILVFLS-KRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAH------RARV 371 (1140)
T ss_pred HHHHhccc-ccccccccccc------hhhhhc-ccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCccc------ceee
Confidence 33332100 00000000000 000000 0123456677788899999888899999999999888 9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhh-cchhhHHHHHHHHH
Q 016902 231 FNFFYLSVTVGAIVAFTLVVYIQM-EHGWGSAFGALAIA 268 (380)
Q Consensus 231 ~~~~~~~~~iG~~i~~~i~~~i~~-~~gw~~~f~i~~~~ 268 (380)
++.+++...+|..+++.+++.+.+ ..++...|++.+++
T Consensus 372 ~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~ 410 (1140)
T PRK06814 372 IAANNVLNAAFMVAGTIILALLQALGFSIPWIILFIALA 410 (1140)
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 999999999999999999988874 44566666554443
No 179
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.98 E-value=1.5e-08 Score=100.97 Aligned_cols=162 Identities=14% Similarity=0.100 Sum_probs=126.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHH
Q 016902 69 IAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLA 148 (380)
Q Consensus 69 ~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~l 148 (380)
|....+++..++..++.....+..+.|.+..+|.+ ...+....+..+...++.+++++++||+ |+|+++.++.+++.+
T Consensus 225 r~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~-gk~~~~~~~~~~~~~ 302 (428)
T PF13347_consen 225 RPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRF-GKKKVYIIGLLLAAL 302 (428)
T ss_pred chHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHc-cceeehhhhHHHHHH
Confidence 34555666666666776666666777777778877 4456666778888888999999999998 999999999999999
Q ss_pred HHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCch-hhhhh
Q 016902 149 GLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKD-YKTHL 227 (380)
Q Consensus 149 g~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~-~~~~r 227 (380)
+.+++.+... .+...+++...+.|+|.++......++.+|..|.++-+ .+++.
T Consensus 303 ~~~~~~~~~~--------------------------~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~ 356 (428)
T PF13347_consen 303 GFLLLFFLGP--------------------------GSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRRE 356 (428)
T ss_pred HHHHHHHHHh--------------------------hhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCch
Confidence 9888776521 25677888888999999999999999999999854322 22346
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhcchh
Q 016902 228 DRFFNFFYLSVTVGAIVAFTLVVYIQMEHGW 258 (380)
Q Consensus 228 ~~~~~~~~~~~~iG~~i~~~i~~~i~~~~gw 258 (380)
+..++.+.+...+|..++..+.+.+.+..|+
T Consensus 357 g~~~s~~~~~~k~~~~la~~i~g~~l~~~Gy 387 (428)
T PF13347_consen 357 GMYFSVNSFFIKIGQGLAGAIVGLLLALVGY 387 (428)
T ss_pred HHHHHhhhhhhHHHHHHHHHHHHHHHHHhCc
Confidence 8888889999999999999988877554443
No 180
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.97 E-value=5.9e-08 Score=94.99 Aligned_cols=166 Identities=10% Similarity=-0.035 Sum_probs=108.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchh---HHHHH-HHH
Q 016902 69 IAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRY---WTIAI-FTT 144 (380)
Q Consensus 69 ~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~---~~i~i-~~~ 144 (380)
+..+.+.+..++....+|++.+++++|+. +.|++.. ++....+...... +..++++|++ .|+ +.... ..+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~wlp~~L~-~~g~s~~-~~~~~~l~~~~g~---~g~~~~~d~~-~r~~~r~~~~~~~~~ 265 (368)
T TIGR00903 192 KDLWIIGAILGFGVALFDNLAIWLEAALR-PAGLEDI-AGDAVALAILAGL---IGVAVIPDRV-ARAGLRSIYIRAAAL 265 (368)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCChH-HHHHHHHHHHHHH---HHHHHhhHHh-hhhhhHHHHHHHHHH
Confidence 34677777888889999999999999996 4678764 4444444444333 3457888886 543 33222 222
Q ss_pred HHHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhh
Q 016902 145 IYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYK 224 (380)
Q Consensus 145 l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~ 224 (380)
+..++...+... .+....++...+.+++..+..+...++.+|.+|++.
T Consensus 266 ~~a~~~~~~~~~----------------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~---- 313 (368)
T TIGR00903 266 LIAAFFLALAFE----------------------------LNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKEL---- 313 (368)
T ss_pred HHHHHHHHHHHc----------------------------cccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhh----
Confidence 222222222211 111223334445566666677778899999999888
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHH
Q 016902 225 THLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLF 276 (380)
Q Consensus 225 ~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~~ 276 (380)
|+++.++.+...++|+.++|.+.+.+.. |....|.+.++..+++.+..
T Consensus 314 --rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~~~ 361 (368)
T TIGR00903 314 --HGKAAGAIGFTSRAISVALALAAMLFIS--SAEAYFTFLAILITIAFAIA 361 (368)
T ss_pred --cCcccchhhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999988887763 55566666666555555443
No 181
>PRK09848 glucuronide transporter; Provisional
Probab=98.96 E-value=8.6e-08 Score=96.10 Aligned_cols=157 Identities=11% Similarity=0.058 Sum_probs=100.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---cchhHHH-HHHH
Q 016902 68 WIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAY---LGRYWTI-AIFT 143 (380)
Q Consensus 68 ~~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~---~GR~~~i-~i~~ 143 (380)
++..+.-.+..+..++.+..+..+++.|+++.+|++..+++.+.....+...+..+++|+++||. +|||+.+ +++.
T Consensus 7 ~~~~~~yg~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~ 86 (448)
T PRK09848 7 WRTIVGYSLGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGT 86 (448)
T ss_pred HHHHHhhccchHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHH
Confidence 33334444455566677666777888899999999999999999999999999999999999984 4887755 4555
Q ss_pred HHHHHHHHHHHhhhhcc-cCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCch
Q 016902 144 TIYLAGLTGITLCATMK-VFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKD 222 (380)
Q Consensus 144 ~l~~lg~~~l~l~~~~~-~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~ 222 (380)
+...+..+++... | .+.+ ......+++...+.+++.+...++..++..++..+. +
T Consensus 87 ~~~~~~~~~~~~~---~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~--~ 142 (448)
T PRK09848 87 APLMIFSVLVFWV---PTDWSH-------------------SSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQP--Q 142 (448)
T ss_pred HHHHHHHHHHHhC---cCCCCc-------------------chHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCH--H
Confidence 5444433333211 1 0000 022333444555677777788777777777776642 2
Q ss_pred hhhhhhhHHHHHHHH-----HHHHHHHHHHHHHH
Q 016902 223 YKTHLDRFFNFFYLS-----VTVGAIVAFTLVVY 251 (380)
Q Consensus 223 ~~~~r~~~~~~~~~~-----~~iG~~i~~~i~~~ 251 (380)
| |....++..++ .+++..++|.+.+.
T Consensus 143 ~---r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~ 173 (448)
T PRK09848 143 S---RARLGAARGIAASLTFVCLAFLIGPSIKNS 173 (448)
T ss_pred H---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 2 55655554433 33455555555543
No 182
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.96 E-value=4.5e-09 Score=102.42 Aligned_cols=140 Identities=16% Similarity=0.155 Sum_probs=104.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCcccccccccCCCCC
Q 016902 102 KSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEP 181 (380)
Q Consensus 102 ~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~ 181 (380)
++....+.+..+..++..+|+++.|+++|++ |||+++....++.+++++++.++ .|..
T Consensus 81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~-GRK~vYG~~liImIi~t~~~~~s---------------------~~~~ 138 (538)
T KOG0252|consen 81 YPSGVLALVNAAALVGTIFGQLFFGWLGDKF-GRKKVYGKELIIMIICSALSGLS---------------------VGTT 138 (538)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhh-cchhhhhHHHHHHHHHHHHhccC---------------------CCCC
Confidence 5667778888889999999999999999998 99999999999999998866654 1222
Q ss_pred CcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHH----HHHHHHHHHHHHHHHHHHhhhc--
Q 016902 182 AKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNF----FYLSVTVGAIVAFTLVVYIQME-- 255 (380)
Q Consensus 182 ~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~----~~~~~~iG~~i~~~i~~~i~~~-- 255 (380)
+...-+.+++.-|+++|+|.|+=+|+..+...|....+. |+.+.++ ..++...|+.++.++..-....
T Consensus 139 ~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~------RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~ 212 (538)
T KOG0252|consen 139 SPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKT------RGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFN 212 (538)
T ss_pred CCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhcc------ccceeEEEEEecchhHhhccHHHHHHHHHHhccCC
Confidence 222457888999999999999999999999999888766 7776665 3445555555554444332211
Q ss_pred ---------chhhHHHHHHHHHH
Q 016902 256 ---------HGWGSAFGALAIAM 269 (380)
Q Consensus 256 ---------~gw~~~f~i~~~~~ 269 (380)
.=||..|.+.++..
T Consensus 213 ~~~~~~~ld~vWRl~~glg~vpa 235 (538)
T KOG0252|consen 213 GPSTYPHLDGVWRIIFGLGAVPA 235 (538)
T ss_pred CCCCchHHHHHHHHHHHHHHHHH
Confidence 12888887655543
No 183
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.94 E-value=4.7e-08 Score=98.86 Aligned_cols=165 Identities=13% Similarity=-0.015 Sum_probs=111.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHH
Q 016902 69 IAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLA 148 (380)
Q Consensus 69 ~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~l 148 (380)
|.+..+++..++..+..+...+..+.|++..++ +....+.+.....++..++.++.++++||+ |+|++++++.++.++
T Consensus 231 ~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-gkk~~~~~~~~~~~~ 308 (473)
T PRK10429 231 DQLSCLLGMALAYNIASNIINGFAIYYFTYVIG-DADLFPYYLSYAGAANLVTLILFPRLVKSL-SRRILWAGASIFPVL 308 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhheeeEEEEECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHHH
Confidence 445555566666666665554544434333333 444455555555577788888999999998 999999988887776
Q ss_pred HHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCC-chhhhhh
Q 016902 149 GLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERS-KDYKTHL 227 (380)
Q Consensus 149 g~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~-~~~~~~r 227 (380)
+.+.+.+.... ++ .+...+++..++.+++.+...+...++.+|..|.++ +..++..
T Consensus 309 ~~~~~~~~~~~----~~-------------------~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~ 365 (473)
T PRK10429 309 SCGVLLLMGLA----AP-------------------HNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCE 365 (473)
T ss_pred HHHHHHHHhcc----Cc-------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccch
Confidence 66555432110 11 234455666677889999888999999999987432 1222335
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhcchh
Q 016902 228 DRFFNFFYLSVTVGAIVAFTLVVYIQMEHGW 258 (380)
Q Consensus 228 ~~~~~~~~~~~~iG~~i~~~i~~~i~~~~gw 258 (380)
+.+++++.+..-+|..+++.+.+++.+..|+
T Consensus 366 G~~~s~~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 366 SIAYSVQTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 6788889999999999999999888665444
No 184
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.94 E-value=1.2e-07 Score=90.35 Aligned_cols=168 Identities=15% Similarity=0.124 Sum_probs=131.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHH
Q 016902 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (380)
Q Consensus 70 ~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg 149 (380)
..|.+.+..-++++.+|.+..|+|.++. +.|+|..+++..++..++......+++-.+++|.-.+|+......+++.+|
T Consensus 209 ~aW~vtLfmGlqS~~~Y~~~~WLP~ili-~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G 287 (395)
T COG2807 209 LAWQVTLFMGLQSLLYYIVIGWLPAILI-DRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVG 287 (395)
T ss_pred hhHHHHHHHHhhHHHHHHHHHHHHHHHH-HcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHH
Confidence 3566677777789999999999999887 669999999999999999999999999999998767888888899999999
Q ss_pred HHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhh
Q 016902 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (380)
Q Consensus 150 ~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~ 229 (380)
.+.+.+. | .+...+. .+++|+|.|+..+....++.+-.++.+ + -++
T Consensus 288 ~~G~~~~-------P--------------------~~~~~lw--~~llG~G~G~~F~laL~li~~rs~~a~--~---Aa~ 333 (395)
T COG2807 288 LVGLLLA-------P--------------------GQLPILW--ALLLGLGQGGAFPLALTLILLRSSDAA--I---AAA 333 (395)
T ss_pred HHHHHHh-------h--------------------hhHHHHH--HHHHhCccchHHHHHHHHHHhhcCChH--H---HHH
Confidence 9888764 1 1233333 478999999999999999999877543 2 344
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcch-hhHHHHHHHHHHHHH
Q 016902 230 FFNFFYLSVTVGAIVAFTLVVYIQMEHG-WGSAFGALAIAMGIS 272 (380)
Q Consensus 230 ~~~~~~~~~~iG~~i~~~i~~~i~~~~g-w~~~f~i~~~~~~~~ 272 (380)
..++-+-...+=+.+||.+.|++.|..| |...+...+.+.++.
T Consensus 334 LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m 377 (395)
T COG2807 334 LSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLM 377 (395)
T ss_pred HHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHH
Confidence 5555555556667789999999998775 887766555444433
No 185
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.93 E-value=3.9e-08 Score=98.82 Aligned_cols=184 Identities=16% Similarity=0.158 Sum_probs=123.1
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcch----hHHHHHH
Q 016902 67 GWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGR----YWTIAIF 142 (380)
Q Consensus 67 ~~~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR----~~~i~i~ 142 (380)
+-+.+|.+++..++...+++.+..++|+|+.+.+|++..+.+...++..+...+..+++|.+||+...| +....+.
T Consensus 256 ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkif 335 (466)
T KOG2532|consen 256 TSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIF 335 (466)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHH
Confidence 335689999999999999999999999999999999999999999999999999999999999987331 1222333
Q ss_pred HHHHHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCch
Q 016902 143 TTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKD 222 (380)
Q Consensus 143 ~~l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~ 222 (380)
..+...+..++.+... +. .|. .. ......+.++..+.|+..+|...|. .|. .++.
T Consensus 336 n~i~~~~~ai~l~~l~---~~----~~~----------~~-~~a~~~l~~~~~~~g~~~~Gf~~~~----~~~-apq~-- 390 (466)
T KOG2532|consen 336 NTIAFGGPAVFLLVLA---FT----SDE----------HR-LLAVILLTIAIGLSGFNISGFYKNH----QDI-APQH-- 390 (466)
T ss_pred HhHHHHHHHHHHHeee---ec----CCC----------cc-hHHHHHHHHHHHHcccchhhhHhhh----hhc-cchH--
Confidence 3333322222222100 00 111 00 0122222223333333334433221 121 2223
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhc---chhhHHHHHHHHHHHHHHHHHHhh
Q 016902 223 YKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQME---HGWGSAFGALAIAMGISNMLFFIG 279 (380)
Q Consensus 223 ~~~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~~---~gw~~~f~i~~~~~~~~~i~~~~~ 279 (380)
-+..+++.++..++.++++|.+.+++..+ ..|++.|++.+++.+++.+++.+.
T Consensus 391 ----a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 391 ----AGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEe
Confidence 57888889999999999999999988732 369999999999988887766543
No 186
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.92 E-value=1.1e-07 Score=95.14 Aligned_cols=186 Identities=13% Similarity=0.067 Sum_probs=122.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHH
Q 016902 68 WIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYL 147 (380)
Q Consensus 68 ~~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~ 147 (380)
.+..+.++...++..+..........+.+-..-|++..++.+..........+..+++.++.||+ |||+.++++..+..
T Consensus 268 R~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~-gRRpLll~~~~~~~ 346 (485)
T KOG0569|consen 268 RRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRL-GRRPLLLISLSLMA 346 (485)
T ss_pred hHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcHHHHHHHHHHH
Confidence 33456666666666555444444455666677899999999999999999999999999999998 99999999999988
Q ss_pred HHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchh-HH-HHHHHHHH--HHHhccchhhhhhhHhhccCCCCCchh
Q 016902 148 AGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQ-ML-YLYTVLYI--TGFGAAGIRPCVSSFGADQFDERSKDY 223 (380)
Q Consensus 148 lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~-~~-~l~~~l~l--~g~g~g~~~~~~~~~~ad~f~~~~~~~ 223 (380)
+..+++.+...+.... .. .. ..+++.++ ..++. |.-|...-+.+|+||...
T Consensus 347 ~~~~~~~~~~~l~~~~---------------------~~~~~y~~i~~~~~~~~~f~~-G~gpi~~fi~aELf~~~~--- 401 (485)
T KOG0569|consen 347 VALLLMSIALFLSNSF---------------------GSWLSYLCIAAIFLFIISFAI-GPGPIPWFIGAELFPQSA--- 401 (485)
T ss_pred HHHHHHHHHHHHHHHh---------------------hhHHHHHHHHHHHHHHHhhhc-CCCchhHHHHHHhCCccc---
Confidence 8887777654321100 01 11 11233333 33333 334666778899999888
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHHhhcccc
Q 016902 224 KTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLY 283 (380)
Q Consensus 224 ~~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~~~~~~~~~ 283 (380)
|..++++-.....+..++-.+....+++..|- ..|.+.++..++..+..+...|+-
T Consensus 402 ---R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPET 457 (485)
T KOG0569|consen 402 ---RSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPET 457 (485)
T ss_pred ---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCccc
Confidence 88888886666666666655555666666653 445555555555555544444443
No 187
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.91 E-value=1.8e-08 Score=101.76 Aligned_cols=147 Identities=12% Similarity=0.060 Sum_probs=115.3
Q ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCccccccccc
Q 016902 97 FYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLL 176 (380)
Q Consensus 97 ~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~ 176 (380)
..+.|+...+-+.+.++|.+++.++.++++.|.||+ .-.+.+..+.++..+..++....
T Consensus 73 ~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~-~ls~~l~~~~~~w~~~~~~~~~~-------------------- 131 (495)
T KOG2533|consen 73 KEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRF-PLSKGLSVSGILWGLFGFLTAAV-------------------- 131 (495)
T ss_pred ccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHH--------------------
Confidence 366778888899999999999999999999999998 74444433333332222221111
Q ss_pred CCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhh--
Q 016902 177 GSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQM-- 254 (380)
Q Consensus 177 ~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~-- 254 (380)
.+...+++.|++.|+..++..|+...+++-.|.+++ |+.-+++|+.+..+|..+|.++...+.+
T Consensus 132 --------~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e------~g~r~~~~~a~~~~g~i~ggliA~g~~~~~ 197 (495)
T KOG2533|consen 132 --------HSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSE------RGLRMGIWYASASLGNIFGGLIAYGVFKLN 197 (495)
T ss_pred --------hhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhh------hhhhHHHHHHhcchhhHHHHHHHHHhhhhc
Confidence 357788999999999999999999999999999877 9999999999999999999888877632
Q ss_pred ----cchhhHHHHHHHHHHHHHHHHHHh
Q 016902 255 ----EHGWGSAFGALAIAMGISNMLFFI 278 (380)
Q Consensus 255 ----~~gw~~~f~i~~~~~~~~~i~~~~ 278 (380)
..||+|.|.|.++++++..++.++
T Consensus 198 ~~~~~~gW~~~FiI~G~i~~~~gi~~f~ 225 (495)
T KOG2533|consen 198 GSGGLAGWRWLFIIEGVITLVLGIVVFF 225 (495)
T ss_pred CCCCcCCceeehhHHHHHHHHHHheEEE
Confidence 458999999998877665554433
No 188
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.89 E-value=2.4e-07 Score=91.41 Aligned_cols=154 Identities=6% Similarity=-0.058 Sum_probs=109.0
Q ss_pred HHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCCC
Q 016902 86 FGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPN 165 (380)
Q Consensus 86 ~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~~ 165 (380)
......++.|+++.+|++..+.+.+.....++..++.++.+++.|++ ++++.+.++.++ .+..+.+...
T Consensus 222 ~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~-~~~~~~~~g~~~-~~~~~~~~~~--------- 290 (393)
T PRK11195 222 ATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLE-TVLRVLPAGILM-GLVVLLMALQ--------- 290 (393)
T ss_pred HHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCC-cccchHHHHHHH-HHHHHHHHHH---------
Confidence 34444566788889999999999999999999999999999999987 888887776433 2222222221
Q ss_pred CCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHH
Q 016902 166 QDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVA 245 (380)
Q Consensus 166 ~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~ 245 (380)
.+...+.+..++.|++.+...++..+...+..|++. .+++.++..++..++|..++
T Consensus 291 -------------------~~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~-----~~g~~~a~~~~~~~~~~~~~ 346 (393)
T PRK11195 291 -------------------HSLLPAYPLLILIGALGGFFVVPMNALLQHRGHVLV-----GAGHSIAVQNFNENLAMLLM 346 (393)
T ss_pred -------------------hHHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccc-----cchhHHHHHhHHHHHHHHHH
Confidence 234445556667888888877777777776544321 16889999999999999999
Q ss_pred HHHHHHhhhcchhhHHHHHHHHHHHHHHHH
Q 016902 246 FTLVVYIQMEHGWGSAFGALAIAMGISNML 275 (380)
Q Consensus 246 ~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~ 275 (380)
..+.+.+ +..|-++.+.+..+..++.+.+
T Consensus 347 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 375 (393)
T PRK11195 347 LGLYSLL-VKLGVPVVAVIVGFGLLVALAM 375 (393)
T ss_pred HHHHHHH-HHcCCCHHHHHHHHHHHHHHHH
Confidence 8888755 5667666666655554444443
No 189
>PRK11043 putative transporter; Provisional
Probab=98.89 E-value=4.7e-07 Score=89.12 Aligned_cols=148 Identities=11% Similarity=-0.001 Sum_probs=100.8
Q ss_pred HHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhccc
Q 016902 82 RMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKV 161 (380)
Q Consensus 82 ~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~ 161 (380)
...++.+..+++.|++ ++|++..+.+........+..++.++++++.||+ ||++.+....++..++.+.+.+.....
T Consensus 216 ~~~~~~~~~~~p~~~~-~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~- 292 (401)
T PRK11043 216 SAAFFAWLTGSPFILE-QMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKW-GGEQLLPWLLVLFAVSVIAIWLASLLS- 292 (401)
T ss_pred HHHHHHHHHHhHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 3444555566777765 5899998888877777778888889999999997 999877666555555444333221100
Q ss_pred CCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHH
Q 016902 162 FMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVG 241 (380)
Q Consensus 162 l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG 241 (380)
+ .....++++..+.+++.+...+.......+.+|+ . +++..++++.....+
T Consensus 293 --~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~g~~~g~~~~~~~~~ 343 (401)
T PRK11043 293 --H--------------------PSLVPLLIPFCVMAAANGAIYPIVVAQALRPFPQ-A------TGKAAALQNTLQLGL 343 (401)
T ss_pred --c--------------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCcc-c------ChHHHHHHHHHHHHH
Confidence 0 1233445556677888888888887777777753 4 789999988877777
Q ss_pred HHHHHHHHHHhhhcchhhHH
Q 016902 242 AIVAFTLVVYIQMEHGWGSA 261 (380)
Q Consensus 242 ~~i~~~i~~~i~~~~gw~~~ 261 (380)
+.+++.+.+.+.+.......
T Consensus 344 ~~~~~~~~g~l~~~~~~~~~ 363 (401)
T PRK11043 344 CFLASLLVSALISTPLLTTG 363 (401)
T ss_pred HHHHHHHHHHccCCChhHHH
Confidence 78888888877664433333
No 190
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.88 E-value=7e-08 Score=91.83 Aligned_cols=187 Identities=12% Similarity=0.020 Sum_probs=122.6
Q ss_pred HhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCcc
Q 016902 90 VNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNC 169 (380)
Q Consensus 90 ~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~~~~~c 169 (380)
+.+..-+....|.+..+...+......+..++...+|.++|++ |||+...+..+...+..++-..+
T Consensus 98 s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~-grr~~f~~T~l~t~v~~~is~~s------------- 163 (528)
T KOG0253|consen 98 SLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTI-GRRKGFNLTFLVTGVFGVISGAS------------- 163 (528)
T ss_pred HHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhh-hcchhhhhhHHHHHHHHHhhcCC-------------
Confidence 3334445666788888888999999999999999999999998 99998877766555443333322
Q ss_pred cccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 016902 170 DRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLV 249 (380)
Q Consensus 170 ~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~ 249 (380)
++...+++.+++.++|.|+ .|...+.-.|..|..+ |..-.-.. ....+|..+...+.
T Consensus 164 ---------------pnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~------r~~~~V~~-~~waig~v~ea~la 220 (528)
T KOG0253|consen 164 ---------------PNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSH------RWLLTVMS-FFWAIGQVFEALLA 220 (528)
T ss_pred ---------------CCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcC------CCcchhHH-HHHHHHHHHHHHHH
Confidence 4677899999999999999 8888888899888766 54433333 33455666665555
Q ss_pred HHhhhcchhhHHHHHHHHHHHHHHHHHHhhcccccccCCCCCccchHHHHHHHHHhhcccccCcc
Q 016902 250 VYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAAFSSS 314 (380)
Q Consensus 250 ~~i~~~~gw~~~f~i~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~~r~~~~p~~ 314 (380)
=.+..+.||||-.........+...+.++.....|..--+|++-+.+ ..+....|-.+.++|-.
T Consensus 221 w~vm~~~gwr~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G~~~kAl-etL~kiArmNg~qlplg 284 (528)
T KOG0253|consen 221 WGVMSNFGWRYLLFTSSTPLMFAARFLVWVYESPRFYLAKGDDYKAL-ETLHKIARMNGKQLPLG 284 (528)
T ss_pred HHHHHhhhHHHHHHHHHhHHHHHHHHHhhcccCcchhhhcCChHHHH-HHHHHHHHhcCCCCCcc
Confidence 44556789998766555444333333333322223333345554443 33444445555677754
No 191
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.88 E-value=8.4e-08 Score=92.85 Aligned_cols=144 Identities=10% Similarity=0.033 Sum_probs=105.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHH
Q 016902 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFL-GISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (380)
Q Consensus 71 ~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~-~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg 149 (380)
.+.+++..++..+++++..+.++.|+++ +|++..+.+.+..... +...++.+++|+++||+ |||+.+.++.++..++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~-g~~~~l~~~~~~~~~~ 288 (356)
T TIGR00901 211 ALLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPL-NILYALLLFGIVQALT 288 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHH
Confidence 5555555666678888888889999986 9999999887777655 56778899999999998 9999998888877766
Q ss_pred HHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhh
Q 016902 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (380)
Q Consensus 150 ~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~ 229 (380)
..++.+.... .... . ....+...++.+.++.+++.+...+...++..+.+|++. |++
T Consensus 289 ~~~~~~~~~~--~~~~------------~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~------~g~ 345 (356)
T TIGR00901 289 NAGFVWLASN--GHHD------------G---ITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKF------GAT 345 (356)
T ss_pred HHHHHHHHhc--Cccc------------c---cccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCc------cHH
Confidence 5554432110 0000 0 000123455666677899999999999999999999988 999
Q ss_pred HHHHHHHHHH
Q 016902 230 FFNFFYLSVT 239 (380)
Q Consensus 230 ~~~~~~~~~~ 239 (380)
.+++++...+
T Consensus 346 ~~g~~~~~~~ 355 (356)
T TIGR00901 346 QMALLSSLSA 355 (356)
T ss_pred HHHHHHHHHh
Confidence 9998776544
No 192
>PRK09669 putative symporter YagG; Provisional
Probab=98.88 E-value=2e-07 Score=93.42 Aligned_cols=124 Identities=12% Similarity=0.065 Sum_probs=90.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhH
Q 016902 108 SNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQM 187 (380)
Q Consensus 108 ~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~ 187 (380)
+.......+...++.+++++++||+ |+|+.+.++.++..++.+.+.+. ++ .+.
T Consensus 267 ~~~~~~~~i~~ii~~~~~~~l~~r~-gk~~~~~~~~~~~~~~~~~~~~~-------~~-------------------~~~ 319 (444)
T PRK09669 267 TLFLVTGMIAGLFGALLSERLLGKF-DRVRAFKWTIVAFVILSALIFFI-------PP-------------------SNV 319 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHHHHHh-------Cc-------------------chH
Confidence 3444455566677788899999997 99999988876665443332221 11 245
Q ss_pred HHHHHHHHHHHHhccchhhhhhhHhhccCCCCCc-hhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcchh
Q 016902 188 LYLYTVLYITGFGAAGIRPCVSSFGADQFDERSK-DYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGW 258 (380)
Q Consensus 188 ~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~-~~~~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~~~gw 258 (380)
..+++..++.++|.++..+...++.+|..|.++. ..++..+.+++.+.+...+|..+++.+++++.+..|+
T Consensus 320 ~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 320 WLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 5567777889999999999999999999984332 1223357788889999999999999999988766555
No 193
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.87 E-value=4.7e-07 Score=86.58 Aligned_cols=155 Identities=16% Similarity=0.118 Sum_probs=106.0
Q ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCccccc
Q 016902 93 VTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRI 172 (380)
Q Consensus 93 ~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~~~~~c~~~ 172 (380)
...+-+++|++..+.+.+...-.+...+...+.|.++|++ |||+..++.++++.+..+..-.
T Consensus 57 ~Y~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~-Grk~~cl~~cily~~scl~k~~----------------- 118 (354)
T PF05631_consen 57 LYALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRY-GRKKACLLFCILYSLSCLTKHS----------------- 118 (354)
T ss_pred hHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHhc-----------------
Confidence 3344568999999988888888888888888999999998 9999999999998877653222
Q ss_pred ccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCC-chhhhhhhhHHHHHH-HHHHHHHHHHHHHHH
Q 016902 173 SQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERS-KDYKTHLDRFFNFFY-LSVTVGAIVAFTLVV 250 (380)
Q Consensus 173 ~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~-~~~~~~r~~~~~~~~-~~~~iG~~i~~~i~~ 250 (380)
.+...++++|++.|+++.....+--+........++ +++ -.+.-|+... +.+.+-+.++.+++-
T Consensus 119 ------------~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~--~L~~tF~~~tf~~n~~vAI~aGv~a~ 184 (354)
T PF05631_consen 119 ------------SNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQE--WLSDTFSLATFFGNGVVAIGAGVVAN 184 (354)
T ss_pred ------------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChH--HHHHHHHHHHHHHhHHHHHHHhHHHH
Confidence 467889999999999998888776665544333222 111 1444454433 333333444445555
Q ss_pred Hhhhcchh--hHHHHHHHHHHHHHHHHHHhh
Q 016902 251 YIQMEHGW--GSAFGALAIAMGISNMLFFIG 279 (380)
Q Consensus 251 ~i~~~~gw--~~~f~i~~~~~~~~~i~~~~~ 279 (380)
++.+..+. ..+|....++.+++.++....
T Consensus 185 ~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~ 215 (354)
T PF05631_consen 185 VLADWFGFGPVAPFDAAIVLLAVAAVLILKT 215 (354)
T ss_pred HHHHHhCCCCcchHHHHHHHHHHHHHHHHhc
Confidence 66665554 678888777777776655443
No 194
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.85 E-value=8.5e-08 Score=91.76 Aligned_cols=141 Identities=19% Similarity=0.239 Sum_probs=114.2
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhcCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHH
Q 016902 74 IFGNEMAERMAYFGLSVNMVTFMFYVMHKS-FADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTG 152 (380)
Q Consensus 74 i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s-~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~ 152 (380)
++...++..+.+++...+++.|+.+.+|++ ..+.+.......++..++.++.|+++||+ |+++.+.+......++.+.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~ 289 (352)
T PF07690_consen 211 LLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRF-GRRRRLLIAILLLILGALG 289 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHHHHHHH
Confidence 444444445566667788889989999999 78889889999999999999999999997 9988888887777777666
Q ss_pred HHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHH
Q 016902 153 ITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFN 232 (380)
Q Consensus 153 l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~ 232 (380)
+.+.... .+....++..++.|++.+...+....+..|.+|++. +++..+
T Consensus 290 ~~~~~~~-------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g 338 (352)
T PF07690_consen 290 LLLLPFS-------------------------SSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEY------RGTAFG 338 (352)
T ss_dssp HCCSHHH-------------------------CHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCH------HHHHHH
T ss_pred HHHHHHh-------------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HHHHHH
Confidence 6553210 134556667788999999999999999999999877 999999
Q ss_pred HHHHHHHHHHHHHH
Q 016902 233 FFYLSVTVGAIVAF 246 (380)
Q Consensus 233 ~~~~~~~iG~~i~~ 246 (380)
+++...++|..++|
T Consensus 339 ~~~~~~~~~~~igP 352 (352)
T PF07690_consen 339 LFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCC
Confidence 99999999999886
No 195
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.85 E-value=7.6e-07 Score=86.62 Aligned_cols=143 Identities=10% Similarity=-0.095 Sum_probs=90.2
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHh
Q 016902 76 GNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITL 155 (380)
Q Consensus 76 ~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l 155 (380)
+..++.....+.+..+.+.|+.+.+|++..+.+.......++..++.+++|+++||+ |||+++.++.++..+..+.+..
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~~~ 279 (377)
T PRK11102 201 LASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRV-GALNMLRFGLWIQFIMGIWLVV 279 (377)
T ss_pred HHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHH
Confidence 333444444455555667778888999999999999999999999999999999997 9999999888765443333322
Q ss_pred hhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHH
Q 016902 156 CATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFY 235 (380)
Q Consensus 156 ~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~ 235 (380)
.... + .....+.++..+.+.+.+...+....+..|..| +. +++..+.++
T Consensus 280 ~~~~----~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~g~~~~~~~ 328 (377)
T PRK11102 280 SALL----D--------------------LGFWALVVGVAAFVGCVSMISSNAMAVILDEFP-HM------AGTASSLAG 328 (377)
T ss_pred HHHH----h--------------------hhHHHHHHHHHHHHHHHHHhhHHHHHHHhcccc-cc------chHHHHHHH
Confidence 2110 0 122333334434444444555555566667665 34 677777754
Q ss_pred HH-HHHHHHHHHHHHH
Q 016902 236 LS-VTVGAIVAFTLVV 250 (380)
Q Consensus 236 ~~-~~iG~~i~~~i~~ 250 (380)
.. ..+|+.+++.+..
T Consensus 329 ~~~~~~g~~~g~~~~~ 344 (377)
T PRK11102 329 TLRFGIGAIVGALLSL 344 (377)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 43 3466666665543
No 196
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.80 E-value=1e-07 Score=95.03 Aligned_cols=191 Identities=13% Similarity=0.021 Sum_probs=139.3
Q ss_pred CcccCCChHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH-hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcch-hHH
Q 016902 61 DLSKTGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFY-VMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGR-YWT 138 (380)
Q Consensus 61 ~~~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~-~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR-~~~ 138 (380)
....+.+||.+++..++.++..+.++.+.+..=.|+++ +.+-+....+++++...++..+..++.|+.+.+. |. |+.
T Consensus 26 ~~~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~-~~~k~P 104 (488)
T KOG2325|consen 26 LDERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKT-GSVKKP 104 (488)
T ss_pred ccccCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhccccccc-CCcccC
Confidence 34457889999999999999888887776667788875 4666777889999999999999999999999997 76 788
Q ss_pred HHHHHHHHHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCC
Q 016902 139 IAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDE 218 (380)
Q Consensus 139 i~i~~~l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~ 218 (380)
++.|+++.++|.++-...... |+ ....++.++|++.|+|.|. .+..-+|++|..-.
T Consensus 105 li~s~ii~~~g~llY~~l~~~----~~-------------------~~~y~mL~~R~l~Gvg~~n-~a~lR~Y~a~~s~~ 160 (488)
T KOG2325|consen 105 LIVSFLIAIIGNLLYLALAYV----PN-------------------GVKYLMLVARILTGVGVGN-FAVLRAYIADASTV 160 (488)
T ss_pred HHHHHHHHHHHHHHHHHHHhc----cc-------------------chHHHHHHHHHHcCcCccc-HHHHHHHHHhccCc
Confidence 889999999998887333322 11 2577889999999999765 56778999997776
Q ss_pred CCchhhhhhhhHHHHHHHHHHHHHHHHHHHH----HHhhhcc---------hhhHHHHHHHHHHHHHHHHHHhhccc
Q 016902 219 RSKDYKTHLDRFFNFFYLSVTVGAIVAFTLV----VYIQMEH---------GWGSAFGALAIAMGISNMLFFIGTPL 282 (380)
Q Consensus 219 ~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~----~~i~~~~---------gw~~~f~i~~~~~~~~~i~~~~~~~~ 282 (380)
++ |.++++....+..+|..+||++. +..+..+ -+..+-|+.+++.++.++++.+..++
T Consensus 161 ~d------R~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E 231 (488)
T KOG2325|consen 161 ED------RPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKE 231 (488)
T ss_pred cc------hHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheee
Confidence 66 77777776555555555555544 3332211 13445567777766666665554443
No 197
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.79 E-value=8.9e-08 Score=97.38 Aligned_cols=178 Identities=16% Similarity=0.151 Sum_probs=137.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHH
Q 016902 69 IAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLA 148 (380)
Q Consensus 69 ~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~l 148 (380)
+..+.+.+...+..++++.-...++.|.. .++++..+++..+++..+...++-++.|+++|+. ..++..+....+...
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~-~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~-~~~~~~~~~~~ll~~ 375 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAK-SLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKP-GIRALVLFLLTLLIA 375 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCcc-ccchHHHHHHHHHHH
Confidence 34566666666777777777777888877 8899999999999999999999999999999987 533333333333333
Q ss_pred HHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhh
Q 016902 149 GLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLD 228 (380)
Q Consensus 149 g~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~ 228 (380)
|...+.+. .| .+...+++.-.+.|+..|.........+.|..+.+. ..
T Consensus 376 gl~~~~~p-----------~~---------------~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~------l~ 423 (509)
T KOG2504|consen 376 GLARLFLP-----------FA---------------TTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEK------LS 423 (509)
T ss_pred HHHHHHHH-----------Hh---------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhh------cc
Confidence 33332221 11 245666677778899999888888889999999887 99
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhcch-hhHHHHHHHHHHHHHHHHHHhhc
Q 016902 229 RFFNFFYLSVTVGAIVAFTLVVYIQMEHG-WGSAFGALAIAMGISNMLFFIGT 280 (380)
Q Consensus 229 ~~~~~~~~~~~iG~~i~~~i~~~i~~~~g-w~~~f~i~~~~~~~~~i~~~~~~ 280 (380)
.++++..+...++.+++|.+.+++.+..| |...|+.+.++++++.++.+..+
T Consensus 424 ~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 424 NAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred hHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 99999999999999999999999988887 99999988888887776655443
No 198
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.79 E-value=4.3e-07 Score=90.19 Aligned_cols=161 Identities=9% Similarity=-0.034 Sum_probs=113.0
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHH
Q 016902 74 IFGNEMAERMAYFGLSVNMVTFMFYV-MHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTG 152 (380)
Q Consensus 74 i~~~~~~~~~~~~~i~~~l~~yl~~~-~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~ 152 (380)
..+..++......++.++++.|+.+. .+.+...++...+.+.++..++.+++++++||+ ++++.+.++.++..+..++
T Consensus 237 ~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~-~~~~~l~i~~~~~~~~~ll 315 (410)
T TIGR00885 237 GVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYL-AAHKVLMAYAIIGMALCLG 315 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHH
Confidence 33344444444445667888998653 255555566677777788899999999999997 9999888887777766655
Q ss_pred HHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHH
Q 016902 153 ITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFN 232 (380)
Q Consensus 153 l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~ 232 (380)
+.+. ... .....+.+.+++.+.+.|.+.+...+.++++. .... .
T Consensus 316 ~~~~----------------------------~~~-~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~------~~~s-~ 359 (410)
T TIGR00885 316 SIFA----------------------------GGH-VGLYCLTLCSAFMSLMFPTIYGIALKGLGQDT------KYGA-A 359 (410)
T ss_pred HHHc----------------------------CCh-HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh------hhhH-H
Confidence 5542 111 12455667788888888999999999998654 2222 2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcc------hhhHHHHHHHHHHHHH
Q 016902 233 FFYLSVTVGAIVAFTLVVYIQMEH------GWGSAFGALAIAMGIS 272 (380)
Q Consensus 233 ~~~~~~~iG~~i~~~i~~~i~~~~------gw~~~f~i~~~~~~~~ 272 (380)
...++ .+|+.+.|.+.|++.|.. +.+..|.++.++.+..
T Consensus 360 ~l~~~-~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 404 (410)
T TIGR00885 360 GLVMA-IIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLCFAVI 404 (410)
T ss_pred HHHHH-HhccchHHHHHHHHHHHhcccccCccchHHHHHHHHHHHH
Confidence 22223 399999999999999854 4788899888776543
No 199
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.78 E-value=2.3e-06 Score=84.02 Aligned_cols=68 Identities=13% Similarity=0.066 Sum_probs=57.2
Q ss_pred HHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhh
Q 016902 88 LSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLC 156 (380)
Q Consensus 88 i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~ 156 (380)
+....+.|+++++|++..+.+.......++..++.++.++++||+ |||+.+.++..+..++.+++.+.
T Consensus 222 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~ 289 (392)
T PRK10473 222 FVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIF-KPRTLMLTSQVLFLAAGITLALS 289 (392)
T ss_pred HHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHH
Confidence 444456778888999998888888888888889999999999997 99999999988888887776654
No 200
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.77 E-value=2.2e-07 Score=88.45 Aligned_cols=171 Identities=12% Similarity=0.095 Sum_probs=110.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhc--CC---------------CH--HHHHHHHHHHHHHHHHHHHHHHHH
Q 016902 68 WIAALFIFGNEMAERMAYFGLSVNMVTFMFYVM--HK---------------SF--ADSSNAVNNFLGISQASSVLGGFL 128 (380)
Q Consensus 68 ~~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~--~~---------------s~--~~a~~~~~~~~~~~~~~~l~~g~l 128 (380)
.+..+.++.+.|...+.+||+.-......+... |. .. ..--.-+.+..+.-+-|.++.+++
T Consensus 325 rkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~i 404 (528)
T KOG0253|consen 325 RKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVI 404 (528)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHH
Confidence 344566777888889999987653332222211 11 11 111122233445566678999999
Q ss_pred HHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhh
Q 016902 129 ADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCV 208 (380)
Q Consensus 129 sD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~ 208 (380)
.|++ |||+++..+.+++.+.++++..... ++ ....+++++|+++. +...+.
T Consensus 405 verl-GRKkTMal~l~~f~iflfll~~c~~-----rn-------------------~~tvllf~arafis----g~fqva 455 (528)
T KOG0253|consen 405 VERL-GRKKTMALSLILFGIFLFLLTTCKT-----RN-------------------AYTVLLFTARAFIS----GAFQVA 455 (528)
T ss_pred HHHh-cchhHHHHHHHHHHHHHHHHHHhcC-----cc-------------------hhHHHHHHHHHHHh----chheEE
Confidence 9996 9999999999999888877765311 00 22445666776654 445567
Q ss_pred hhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHH
Q 016902 209 SSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNML 275 (380)
Q Consensus 209 ~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~ 275 (380)
+.|..|.+|+.. |+.+.+.-.-...||++++|+++ +..+.+-..+..+..++.+++.+.
T Consensus 456 YvYtPEVyPTav------RatgvGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIa 514 (528)
T KOG0253|consen 456 YVYTPEVYPTAV------RATGVGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIA 514 (528)
T ss_pred EEecCcccchhh------hhcchhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHH
Confidence 888999999988 99999998888999999999988 333333333444444444444443
No 201
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.76 E-value=9.3e-07 Score=87.94 Aligned_cols=215 Identities=12% Similarity=0.113 Sum_probs=143.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---cchhHHH-HHHHH
Q 016902 69 IAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAY---LGRYWTI-AIFTT 144 (380)
Q Consensus 69 ~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~---~GR~~~i-~i~~~ 144 (380)
+.-+--.+.-+..++.+..+..++..|.++.+|++...++.+..+.-+.-++.-++.|.++||. +||+|.. +++.+
T Consensus 12 ~eki~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~i 91 (467)
T COG2211 12 KEKIGYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAI 91 (467)
T ss_pred HHHHhhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhH
Confidence 3334444455566677767778899999999999999999999999999999999999999953 5987654 45556
Q ss_pred HHHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhh
Q 016902 145 IYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYK 224 (380)
Q Consensus 145 l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~ 224 (380)
.+.+..+++..+ |+ .+ .+.+....++..++.+++...+..+..++.+++.++. +|
T Consensus 92 p~~i~~~l~F~~-------p~--~~-------------~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~--~E- 146 (467)
T COG2211 92 PFAIVAVLLFIT-------PD--FS-------------MTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDP--QE- 146 (467)
T ss_pred HHHHHHHHHHcC-------CC--cc-------------cCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCH--HH-
Confidence 677766666654 11 01 0134555566667888888888888889999988753 33
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHhhh-------cchhhHHHHHHHHHHHHHHHHHHhhcccc-cccCCCCC-ccch
Q 016902 225 THLDRFFNFFYLSVTVGAIVAFTLVVYIQM-------EHGWGSAFGALAIAMGISNMLFFIGTPLY-RHRLPGGS-PLTR 295 (380)
Q Consensus 225 ~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~-------~~gw~~~f~i~~~~~~~~~i~~~~~~~~~-~~~~~~~~-~~~~ 295 (380)
|.+..+|..+..++|.++...+...+.. ..||+...++.+++..+++++.+...++. ....+..+ ...+
T Consensus 147 --R~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~~~~~~ 224 (467)
T COG2211 147 --RASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVVETQPTKTGVKLK 224 (467)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccCccccccc
Confidence 8999999988888887776555544432 23566555555555555544444433332 22222222 4455
Q ss_pred HHHHHHHHHhhcccc
Q 016902 296 VAQVLVAAFRKRHAA 310 (380)
Q Consensus 296 ~~~v~~~a~~~r~~~ 310 (380)
+...+...+|||...
T Consensus 225 ~~~~~~~~~~Nrp~~ 239 (467)
T COG2211 225 LKDSFLLIFKNRPLL 239 (467)
T ss_pred HHHHHHHHHccchHH
Confidence 665666667776543
No 202
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.70 E-value=5.4e-07 Score=88.57 Aligned_cols=179 Identities=12% Similarity=-0.009 Sum_probs=100.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHH-
Q 016902 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLA- 148 (380)
Q Consensus 70 ~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~l- 148 (380)
..+...+..++..+++-...++++.+|++..|++.++.+.+.++..+...+..++.|.++||+ |.||-+++...+..+
T Consensus 8 ~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dkl-g~kK~Ll~~i~~l~~l 86 (412)
T PF01306_consen 8 NYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKL-GLKKHLLWFIAILLLL 86 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHC-TTCSHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchh-hhhHHHHHHHHHHHHH
Confidence 445555555555566555678899999999999999999999999999999999999999997 866655444333222
Q ss_pred -HHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhh
Q 016902 149 -GLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHL 227 (380)
Q Consensus 149 -g~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r 227 (380)
+.....+. .|.+.. | ++++..+.++..+.......+. .|.+-++.+ ++.
T Consensus 87 ~~pff~~v~--~pll~~---------------------n---~~lg~iig~i~l~~~f~~~~~~-~Ea~~er~s---r~~ 136 (412)
T PF01306_consen 87 FGPFFIYVF--GPLLQS---------------------N---FWLGAIIGGIYLGLVFNAGVPL-SEAYAERVS---RRN 136 (412)
T ss_dssp CHHHHHHTH--HHHHHT---------------------T----HHHHHHTTTTTTTTTTTHHHH-HHHHHHHHH---HHH
T ss_pred HHHHHHHHH--HHHHHH---------------------H---HHHHHHHHHHHHHHHHcccchH-HHHHHHHHH---HHh
Confidence 22222111 111111 1 2333333333323222222111 144332221 111
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHHhhc
Q 016902 228 DRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGT 280 (380)
Q Consensus 228 ~~~~~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~~~~~~ 280 (380)
+-=++---....+|.+++..++|++.+ .+-...||+..++.++..++.+..+
T Consensus 137 ~feYG~~R~wGSig~ai~s~~~G~L~~-i~p~~~fwi~s~~~~il~lll~~~~ 188 (412)
T PF01306_consen 137 GFEYGRARMWGSIGFAIASLLAGILFN-INPNIIFWIASAAAIILLLLLLLLK 188 (412)
T ss_dssp SS-HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHSS-
T ss_pred cCCcchHHHHhhHHHHHHHHHhheeee-eCccHHHHHHHHHHHHHHHHHHHcC
Confidence 222333455677888888889998875 4556788877666555554444444
No 203
>PRK11462 putative transporter; Provisional
Probab=98.69 E-value=2.4e-06 Score=86.20 Aligned_cols=154 Identities=10% Similarity=0.040 Sum_probs=89.7
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhh
Q 016902 77 NEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLC 156 (380)
Q Consensus 77 ~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~ 156 (380)
..++..+......+....|.+-.+|.. ...+.+...+.+...++.+++++++||+ |+|+++..+..+..+..+++.+.
T Consensus 236 ~~~~~~~~~~~~~~~~~y~~~y~~g~~-~~~~~~l~~~~i~~iig~~l~~~l~~r~-gkk~~~~~~~~~~~~~~~~~~~~ 313 (460)
T PRK11462 236 LTIFNILAVCVRGGAMMYYVTWILGTP-EVFVAFLTTYCVGNLIGSALAKPLTDWK-CKVTIFWWTNALLAVISLAMFFV 313 (460)
T ss_pred HHHHHHHHHHHHHhHhhhhhhhhcCCh-HHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHHHHHh
Confidence 334444443333333333333334433 3334556667777788889999999997 99888765554443333332221
Q ss_pred hhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCch-hhhhhhhHHHHHH
Q 016902 157 ATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKD-YKTHLDRFFNFFY 235 (380)
Q Consensus 157 ~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~-~~~~r~~~~~~~~ 235 (380)
+. .+...+++..++.+++.++..+...++.+|..|.++-+ .+++-+.+++.+.
T Consensus 314 -------~~-------------------~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~ 367 (460)
T PRK11462 314 -------PM-------------------QASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTL 367 (460)
T ss_pred -------ch-------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHH
Confidence 11 12223344455667777777777788889988743211 1122355667777
Q ss_pred HHHHHHHHHHHHHHHHhhhcchh
Q 016902 236 LSVTVGAIVAFTLVVYIQMEHGW 258 (380)
Q Consensus 236 ~~~~iG~~i~~~i~~~i~~~~gw 258 (380)
+...+|..+++.+.+++.+..||
T Consensus 368 f~~Klg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 368 FVLKLGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCC
Confidence 88888888888888776544343
No 204
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.68 E-value=9.6e-07 Score=87.86 Aligned_cols=158 Identities=14% Similarity=0.031 Sum_probs=119.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHH
Q 016902 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (380)
Q Consensus 71 ~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~ 150 (380)
..++++..++...++....+.++.|.+..+|.+...+.........+..++.++..+|++++ |+|+++.++.++.+++.
T Consensus 238 ~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~-gkk~~~~~~~~~~~i~~ 316 (467)
T COG2211 238 LLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKF-GKKKLFLIGLLLLAVGY 316 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-chHHHHHHHHHHHHHHH
Confidence 44455555665555555555667777777888877777777777777777789999999997 99999999999999999
Q ss_pred HHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCch-hhhhhhh
Q 016902 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKD-YKTHLDR 229 (380)
Q Consensus 151 ~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~-~~~~r~~ 229 (380)
+++.+.. + .+..++++...+.++|.+...+...++++|..|-++-+ .++.-|.
T Consensus 317 ~~~~f~~-------~-------------------~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi 370 (467)
T COG2211 317 LLLYFTP-------A-------------------GSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGI 370 (467)
T ss_pred HHHHhhc-------C-------------------cchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhh
Confidence 9888752 1 45777888888999999999999999999998843321 1222466
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhc
Q 016902 230 FFNFFYLSVTVGAIVAFTLVVYIQME 255 (380)
Q Consensus 230 ~~~~~~~~~~iG~~i~~~i~~~i~~~ 255 (380)
.++.+.+..=+|..++..+.+++...
T Consensus 371 ~~s~~tF~~K~g~ala~~~~g~~L~~ 396 (467)
T COG2211 371 VYSGMTFFRKLGLALAGFIPGWILGA 396 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777778888877777766443
No 205
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.68 E-value=3.3e-06 Score=83.12 Aligned_cols=176 Identities=9% Similarity=0.066 Sum_probs=132.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHH
Q 016902 68 WIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHK---SFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTT 144 (380)
Q Consensus 68 ~~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~---s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~ 144 (380)
-|..|...+........++......+.|.+..++- +....+...++-.+.-.+.-.+..++-+|+ |-|+.++++.+
T Consensus 219 ~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~ri-g~k~~Lllag~ 297 (412)
T PF01306_consen 219 MRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRI-GAKNLLLLAGV 297 (412)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhc-ChHhHHHHHHH
Confidence 34556555555555555555655678888766543 334456677777777788888889999997 99999999999
Q ss_pred HHHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhh
Q 016902 145 IYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYK 224 (380)
Q Consensus 145 l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~ 224 (380)
+..+=.++++++ .+...+.+...+-++-.+.......-|+++.||++-
T Consensus 298 i~~iRi~~~~~~----------------------------~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rl---- 345 (412)
T PF01306_consen 298 IMAIRIIGSGFA----------------------------TNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRL---- 345 (412)
T ss_dssp HHHHHHHHHHT------------------------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGG----
T ss_pred HHHHHHHHHhhh----------------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhH----
Confidence 988887777765 356778888899999999999999999999999776
Q ss_pred hhhhhHHHH-HHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHHh
Q 016902 225 THLDRFFNF-FYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (380)
Q Consensus 225 ~~r~~~~~~-~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~~~~ 278 (380)
.++.+.+ ++++..+|..+.+.++|++.|+.|++.+|++.+++.++..++-.+
T Consensus 346 --sAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f 398 (412)
T PF01306_consen 346 --SATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAF 398 (412)
T ss_dssp --HHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHhee
Confidence 6777777 578889999999999999999999999998877766555544333
No 206
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.65 E-value=3e-07 Score=88.90 Aligned_cols=138 Identities=11% Similarity=-0.002 Sum_probs=97.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHH
Q 016902 72 LFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLT 151 (380)
Q Consensus 72 ~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~ 151 (380)
+.+.+..++.....+++..+++.|+++.+|++..+++.......+...++.+++|+++||+ |||+.+..+..+..++..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~ 306 (366)
T TIGR00886 228 WILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRL-GGARKLLMSFLGVAMGAF 306 (366)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhh-ccchhHHHHHHHHHHHHH
Confidence 3444444444555667778889999999999999999888888888899999999999998 999888777766666655
Q ss_pred HHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHH
Q 016902 152 GITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFF 231 (380)
Q Consensus 152 ~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~ 231 (380)
++.+... ++ .+...+++..++.+++.|...+...+..++.++ ++ ++...
T Consensus 307 ~~~~~~~-----~~-------------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~------~g~~~ 355 (366)
T TIGR00886 307 LVVLGLV-----SP-------------------LSLAVFIVLFVALFFFSGAGNGSTFALVPHIFR-RA------TGAVS 355 (366)
T ss_pred HHHhcCC-----Cc-------------------chHHHHHHHHHHHHHHhccccchhhhcchhhch-hh------cccHH
Confidence 5544210 00 034444555556666666666677778888886 34 78888
Q ss_pred HHHHHHHHHH
Q 016902 232 NFFYLSVTVG 241 (380)
Q Consensus 232 ~~~~~~~~iG 241 (380)
++++...++|
T Consensus 356 g~~~~~~~~g 365 (366)
T TIGR00886 356 GLVGAIGNLG 365 (366)
T ss_pred HHHHHhccCC
Confidence 8877666654
No 207
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.65 E-value=7.3e-06 Score=80.47 Aligned_cols=139 Identities=12% Similarity=-0.071 Sum_probs=93.1
Q ss_pred HHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCc
Q 016902 89 SVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDN 168 (380)
Q Consensus 89 ~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~~~~~ 168 (380)
....+.|+++.+|++..+.+........+..++.++.+++.|++ ||.. ..+.....++.+++.+.... ..
T Consensus 227 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~----~~--- 296 (394)
T PRK11652 227 EACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRF-STLM--WQSVICCLLAGLLMWIPGWF----GV--- 296 (394)
T ss_pred HHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH--HHHHHHHHHHHHHHHHHHHh----cc---
Confidence 34456678777999998888877777777777888888888887 6332 22222233332222221100 00
Q ss_pred ccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHH
Q 016902 169 CDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTL 248 (380)
Q Consensus 169 c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i 248 (380)
.+...++++..+.++|.+...+....+..|.+|+ + ++...++++...++|..+++.+
T Consensus 297 ----------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~------~g~~~~~~~~~~~lg~~~~~~~ 353 (394)
T PRK11652 297 ----------------MNVWTLLVPAALFFFGAGMLFPLATSGAMEPFPY-L------AGTAGALLGGLQNIGSGLAALL 353 (394)
T ss_pred ----------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-c------chHHHHHHHHHHHHHHHHHHHH
Confidence 1334456667788888888888888888888873 3 6788888888889999999999
Q ss_pred HHHhhhcchhhH
Q 016902 249 VVYIQMEHGWGS 260 (380)
Q Consensus 249 ~~~i~~~~gw~~ 260 (380)
.+++.....+..
T Consensus 354 ~~~~~~~~~~~~ 365 (394)
T PRK11652 354 SAMLPQTGQFSL 365 (394)
T ss_pred HHHccCCchHHH
Confidence 888876544443
No 208
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.61 E-value=1e-05 Score=80.15 Aligned_cols=173 Identities=9% Similarity=0.011 Sum_probs=121.5
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhh
Q 016902 77 NEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLC 156 (380)
Q Consensus 77 ~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~ 156 (380)
..++...+.-.+.++...|+++.-+.+....+...++-.+.-...-.+.+++-.|+ |-+++++++.+.+.+=..+.+..
T Consensus 215 ~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~-g~~~ll~~a~~~~~vR~~l~a~~ 293 (400)
T PF03825_consen 215 AAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRF-GIKWLLLLALVAYAVRWLLYAYF 293 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHh
Confidence 33444444444556778888765547766666666666666667777888999997 99999999999888877766653
Q ss_pred hhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHH
Q 016902 157 ATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYL 236 (380)
Q Consensus 157 ~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~ 236 (380)
.. |. .........+..+.|+..|........|+.+..|++. |+++.++|..
T Consensus 294 ~~-----~~------------------~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~------~at~Q~l~~~ 344 (400)
T PF03825_consen 294 SD-----PW------------------PFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPEL------RATAQGLYSA 344 (400)
T ss_pred cC-----Cc------------------HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccc------hHHHHHHHHH
Confidence 11 00 0111223334456899999999999999999999988 9999999765
Q ss_pred -HHHHHHHHHHHHHHHhhhcchhh------HHHHHHHHHHHHHHHHHHhh
Q 016902 237 -SVTVGAIVAFTLVVYIQMEHGWG------SAFGALAIAMGISNMLFFIG 279 (380)
Q Consensus 237 -~~~iG~~i~~~i~~~i~~~~gw~------~~f~i~~~~~~~~~i~~~~~ 279 (380)
...+|..+|..++|++.+.+|-+ ..+.+++++.++..+++++.
T Consensus 345 ~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~ 394 (400)
T PF03825_consen 345 LSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVIL 394 (400)
T ss_pred HHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhh
Confidence 45799999999999999877633 34455555555555555544
No 209
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.59 E-value=3.6e-06 Score=85.27 Aligned_cols=187 Identities=11% Similarity=0.084 Sum_probs=117.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHH----HHHHHHHHHHHHHHHHHH----HHHHHHhhcchhHH--HH
Q 016902 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFAD----SSNAVNNFLGISQASSVL----GGFLADAYLGRYWT--IA 140 (380)
Q Consensus 71 ~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~----a~~~~~~~~~~~~~~~l~----~g~lsD~~~GR~~~--i~ 140 (380)
+..+++..++..+.+.-..+.++.|..+..+.+... .+++.++-.+...+..++ ..++.+|..+.+.. +.
T Consensus 274 ~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~ 353 (475)
T TIGR00924 274 YIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFT 353 (475)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHH
Confidence 333333334444555455566777776665543211 223333222222222222 22444431122333 36
Q ss_pred HHHHHHHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCC
Q 016902 141 IFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERS 220 (380)
Q Consensus 141 i~~~l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~ 220 (380)
++.++..++++.+++...... .....+..++++..++.++|.....|...++.+++.|++.
T Consensus 354 ~G~~l~~~~~~~~~~~~~~~~-------------------~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~ 414 (475)
T TIGR00924 354 LGMLFCGASFLTFAASIWFAD-------------------AGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRL 414 (475)
T ss_pred HHHHHHHHHHHHHHHHHhhcC-------------------CCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHH
Confidence 778888888777765421100 0001467788889999999999999999999999999887
Q ss_pred chhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHHhhccc
Q 016902 221 KDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPL 282 (380)
Q Consensus 221 ~~~~~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~~~~~~~~ 282 (380)
|+.++++++.+..+|..+++.+.....+..+|...|...++++++..++++...|.
T Consensus 415 ------~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (475)
T TIGR00924 415 ------MGQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMVPW 470 (475)
T ss_pred ------HHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998888877666678878877776666665555554443
No 210
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.58 E-value=7.5e-06 Score=75.48 Aligned_cols=153 Identities=12% Similarity=0.094 Sum_probs=102.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHH
Q 016902 68 WIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYL 147 (380)
Q Consensus 68 ~~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~ 147 (380)
|-.....+.+..+. -+.|.+. .....+.+.+|++..+...+...-.++.+++ ++.|.+.|++ |.+.+++++.+...
T Consensus 2 W~~l~a~~~v~~~~-Gt~Y~Fs-~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~-gp~~~l~iG~~~~~ 77 (250)
T PF06813_consen 2 WLSLVASIWVQLCS-GTTYTFS-AYSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRF-GPWVVLLIGAVLGF 77 (250)
T ss_pred hhhHHHHHHHHHhc-Ccccchh-hhhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhc-chHHHHHHHHHHHH
Confidence 44444444444333 2334343 3456788999999999999998888888875 7889999998 99999999999999
Q ss_pred HHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhh
Q 016902 148 AGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHL 227 (380)
Q Consensus 148 lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r 227 (380)
+|+.++.++..-. + .....+.+.+..++.+.|.+.............||+ + |
T Consensus 78 ~GY~~~~l~~~~~-i--------------------~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~------R 129 (250)
T PF06813_consen 78 VGYGLLWLAVSGR-I--------------------PSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-S------R 129 (250)
T ss_pred HHHHHHHHHHhCc-c--------------------CccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-c------c
Confidence 9999888753200 0 002344555555555566555555555566688984 5 8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHh
Q 016902 228 DRFFNFFYLSVTVGAIVAFTLVVYI 252 (380)
Q Consensus 228 ~~~~~~~~~~~~iG~~i~~~i~~~i 252 (380)
|...++.-....+++.+-..+...+
T Consensus 130 G~vvgilk~~~GLSaai~t~i~~~~ 154 (250)
T PF06813_consen 130 GTVVGILKGFFGLSAAIFTQIYSAF 154 (250)
T ss_pred CceehhhhHHHHhHHHHHHHHHHHH
Confidence 8888885555555555544443333
No 211
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.52 E-value=3.2e-05 Score=76.60 Aligned_cols=115 Identities=11% Similarity=0.024 Sum_probs=78.0
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHH
Q 016902 74 IFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGI 153 (380)
Q Consensus 74 i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l 153 (380)
+....++.-+.+-...++++.|+.+ .|++..+.+.+.++..+...+.++++|+++||+..+++.+.+..++..+.+...
T Consensus 7 Ls~~~f~~f~~~G~~~p~~~~~L~~-~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~ 85 (400)
T PF03825_consen 7 LSLMYFLYFFAYGAFLPYLPLYLES-RGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLL 85 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHH
Confidence 3444455445554566778889975 679999999999999999999999999999998446777766655555443333
Q ss_pred HhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCC
Q 016902 154 TLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFD 217 (380)
Q Consensus 154 ~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~ 217 (380)
... .+...+++..++..+......|..-++.-+...
T Consensus 86 ~~~----------------------------~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~ 121 (400)
T PF03825_consen 86 AFS----------------------------SSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLG 121 (400)
T ss_pred HHh----------------------------ccHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc
Confidence 322 234445555556666666666666665555554
No 212
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.45 E-value=2.6e-05 Score=75.96 Aligned_cols=165 Identities=16% Similarity=0.134 Sum_probs=131.9
Q ss_pred HHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcc
Q 016902 81 ERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMK 160 (380)
Q Consensus 81 ~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~ 160 (380)
..++++.=-..+=+|--+.||++..+.+.+...+.++..++-.+.|++..+..|.+++..+++.+..+++.++.++...
T Consensus 220 ~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~- 298 (403)
T PF03209_consen 220 GTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPL- 298 (403)
T ss_pred HHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 3444443334456788889999999999999999999999999999988866799999999999999998888776431
Q ss_pred cCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHH
Q 016902 161 VFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTV 240 (380)
Q Consensus 161 ~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~i 240 (380)
.+...+..+.+++|+|.|.+.....+..-|+..++. .+.+++.|-....+
T Consensus 299 ------------------------~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~------aG~~mG~WGaaQA~ 348 (403)
T PF03209_consen 299 ------------------------GSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGR------AGLFMGAWGAAQAI 348 (403)
T ss_pred ------------------------ccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcc------hhHHHHHHHHHHHH
Confidence 246678899999999999999888888899988776 78999999998888
Q ss_pred HHHHHHHHHHHhhhc----------chhhHHHHHHHHHHHHHHHHH
Q 016902 241 GAIVAFTLVVYIQME----------HGWGSAFGALAIAMGISNMLF 276 (380)
Q Consensus 241 G~~i~~~i~~~i~~~----------~gw~~~f~i~~~~~~~~~i~~ 276 (380)
+..++..+++.+.|- .+|...|.+-++.+++++++.
T Consensus 349 A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll 394 (403)
T PF03209_consen 349 ARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVLL 394 (403)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 888888877766442 347777777777776666554
No 213
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.43 E-value=2.7e-05 Score=71.29 Aligned_cols=144 Identities=22% Similarity=0.274 Sum_probs=103.5
Q ss_pred HHHHHhcCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCcccc
Q 016902 94 TFMFYVMHKSF--ADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDR 171 (380)
Q Consensus 94 ~yl~~~~~~s~--~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~~~~~c~~ 171 (380)
..+...++.+. ...+...+.+.....++.++.|.++|++ |||+.++.+...+.++.+++.+...
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~~~~~~~~~~~~------------- 91 (338)
T COG0477 26 PLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRY-GRRKVLIIGLLLFLLGTLLLALAPN------------- 91 (338)
T ss_pred HHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccc-cchHHHHHHHHHHHHHHHHHHhCcc-------------
Confidence 33444555554 4678888888888888889999999998 9998888887765555444444210
Q ss_pred cccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHH-HHHHHHHHHHHHHH
Q 016902 172 ISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYL-SVTVGAIVAFTLVV 250 (380)
Q Consensus 172 ~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~-~~~iG~~i~~~i~~ 250 (380)
.....+++.+++.|++.+...+...++.+|.++. . ..|+...+.+.. ...+|..+++.+++
T Consensus 92 -------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (338)
T COG0477 92 -------------VGLALLLILRLLQGLGGGGLLPVASALLSEWFPE-A----TERGLAVGLVTLGAGALGLALGPLLAG 153 (338)
T ss_pred -------------chHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCc-h----hHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1356677788888999998999999999999987 1 227888887666 57777788876666
Q ss_pred Hhhhc--chhhHHHHHHHHHH
Q 016902 251 YIQME--HGWGSAFGALAIAM 269 (380)
Q Consensus 251 ~i~~~--~gw~~~f~i~~~~~ 269 (380)
++... .+|++.|.+.....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~ 174 (338)
T COG0477 154 LLLGALLWGWRAAFLLAALLG 174 (338)
T ss_pred HHHHHHhcchHHHHHHHHHHH
Confidence 65543 56888666555444
No 214
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=98.42 E-value=3.2e-08 Score=101.36 Aligned_cols=204 Identities=15% Similarity=0.112 Sum_probs=2.8
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHH
Q 016902 73 FIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTG 152 (380)
Q Consensus 73 ~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~ 152 (380)
++.+..+++ +..+++.....+-+.++|+++.++++.+.+.+-++..+..++..++.++. -|-|.+-++.++..+|.++
T Consensus 7 ~~~~~~~~q-~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~-hrprwig~g~~~~~~g~~l 84 (539)
T PF03137_consen 7 FLCLLGLFQ-MMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRG-HRPRWIGIGALLMGLGSLL 84 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCcceeeecHHHHHHHHHH
Confidence 334444555 66667777777889999999999999999999999999999999999985 6677888889999999988
Q ss_pred HHhhhhccc-CCCC------------CCcccc-----cccccCCCC---C-CcchhHHHHHHHHHHHHHhccchhhhhhh
Q 016902 153 ITLCATMKV-FMPN------------QDNCDR-----ISQLLGSCE---P-AKSWQMLYLYTVLYITGFGAAGIRPCVSS 210 (380)
Q Consensus 153 l~l~~~~~~-l~~~------------~~~c~~-----~~~~~~~c~---~-~~~~~~~~l~~~l~l~g~g~g~~~~~~~~ 210 (380)
+++-..+.. ..+. ...|.. .....+.|. . ....-..+++++.++.|+|.....+...+
T Consensus 85 ~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~t 164 (539)
T PF03137_consen 85 FALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGIT 164 (539)
T ss_dssp -------------------------------------------------------------------SSS----------
T ss_pred HhccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceee
Confidence 887433211 0000 001200 000000111 1 11123466778889999999988898889
Q ss_pred HhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhh---------------------cch-hhHHHHHHHHH
Q 016902 211 FGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQM---------------------EHG-WGSAFGALAIA 268 (380)
Q Consensus 211 ~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~---------------------~~g-w~~~f~i~~~~ 268 (380)
|+=|-.+++. -..++++++....+|+++|.++++.... .+| |+.+|.+.+++
T Consensus 165 YiDDnv~~~~------splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~ 238 (539)
T PF03137_consen 165 YIDDNVSKKN------SPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGIL 238 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eecccccccc------CccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHH
Confidence 9888877766 6788889999999999999888765421 034 89999988888
Q ss_pred HHHHHHHHHhhccccc
Q 016902 269 MGISNMLFFIGTPLYR 284 (380)
Q Consensus 269 ~~~~~i~~~~~~~~~~ 284 (380)
.++..+.++...|...
T Consensus 239 ~~l~aipl~~FPk~lp 254 (539)
T PF03137_consen 239 LFLSAIPLFFFPKKLP 254 (539)
T ss_dssp ----------------
T ss_pred HHHHHHHHHcCCccCC
Confidence 7777666666555443
No 215
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.41 E-value=3.6e-06 Score=87.47 Aligned_cols=200 Identities=14% Similarity=0.125 Sum_probs=141.3
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhh
Q 016902 77 NEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLC 156 (380)
Q Consensus 77 ~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~ 156 (380)
..+...+.. ++....++-+.+.|+++..+.+++.+.+-++..+..++..+..-|. =|-+.|-++.+++.+|.+++++-
T Consensus 105 ~~~~q~l~~-~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~-HrPr~Ig~G~~~m~lgsll~alP 182 (735)
T KOG3626|consen 105 AAFAQGLYV-GYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRG-HRPRWIGIGLVLMGLGSLLFALP 182 (735)
T ss_pred HHHHHHhhh-hhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhcccc-CccceeeechhHHHHHHHHHhCh
Confidence 344444444 7777788889999999999999999999999999999999998886 67778888999999999988874
Q ss_pred hhccc-CC--------CCCCc------c--ccccc----ccCCCC--CCcch-hHHHHHHHHHHHHHhccchhhhhhhHh
Q 016902 157 ATMKV-FM--------PNQDN------C--DRISQ----LLGSCE--PAKSW-QMLYLYTVLYITGFGAAGIRPCVSSFG 212 (380)
Q Consensus 157 ~~~~~-l~--------~~~~~------c--~~~~~----~~~~c~--~~~~~-~~~~l~~~l~l~g~g~g~~~~~~~~~~ 212 (380)
..+.. .. +.+.+ | ....+ ..+.|. ..+.. -+.+++++.++.|+|..-+.+.-.+|+
T Consensus 183 Hf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYi 262 (735)
T KOG3626|consen 183 HFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYI 262 (735)
T ss_pred HHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccc
Confidence 22100 00 00000 1 00000 011222 12222 344677888999999888888877877
Q ss_pred hccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhh------------------cch-hhHHHHHHHHHHHHHH
Q 016902 213 ADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQM------------------EHG-WGSAFGALAIAMGISN 273 (380)
Q Consensus 213 ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~------------------~~g-w~~~f~i~~~~~~~~~ 273 (380)
=|-...++ -..++++++....+|+++|.+++++... .+| |+.+|++++++.+++.
T Consensus 263 DDnvk~~~------SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a 336 (735)
T KOG3626|consen 263 DDNVKKKN------SPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSA 336 (735)
T ss_pred cccccccC------CcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHH
Confidence 66665555 6788899999999999999998887532 134 8999999999988888
Q ss_pred HHHHhhccccc
Q 016902 274 MLFFIGTPLYR 284 (380)
Q Consensus 274 i~~~~~~~~~~ 284 (380)
+.+++..+.+.
T Consensus 337 ~p~f~fPk~lp 347 (735)
T KOG3626|consen 337 VPLFFFPKELP 347 (735)
T ss_pred HHHHhCcccCc
Confidence 87777665544
No 216
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.40 E-value=5.8e-05 Score=75.00 Aligned_cols=167 Identities=12% Similarity=0.048 Sum_probs=102.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHH
Q 016902 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (380)
Q Consensus 71 ~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~ 150 (380)
++...+..++....+++....+|.|+++.+|++..+.+.......++..++..+.+.+.++. ++++.+.....+..+|.
T Consensus 220 ~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~-~~~~~~~~~~~~~~ig~ 298 (413)
T PRK15403 220 FLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDP-TEPRFIWRAVPIQLVGL 298 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CchhHHHHHHHHHHHHH
Confidence 44444445555666666667778899999999999988887767777777777777665444 44444444444555555
Q ss_pred HHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhH
Q 016902 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (380)
Q Consensus 151 ~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~ 230 (380)
+++.+.... .+ .....++++.++.++|.+...++.....- .+.+.+ +++.
T Consensus 299 ~l~~~~~~~---~~--------------------~~~~~~~~~~~l~~~G~~~~~p~~~~~al--~~~~~~-----~G~a 348 (413)
T PRK15403 299 ALLIVGNLL---WP--------------------HVWLWSVLGTSLYAFGIGLIFPTLFRFTL--FSNNLP-----KGTV 348 (413)
T ss_pred HHHHHHHHH---cc--------------------ccHHHHHHHHHHHHHHHHHHhHHHHHHHh--ccCCCC-----CcHH
Confidence 554433110 01 12333566777788888888777775332 222211 5666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHH
Q 016902 231 FNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAM 269 (380)
Q Consensus 231 ~~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~ 269 (380)
.+.+......+..+++.+.+++..+ +-.++|.+..++.
T Consensus 349 ~a~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~ 386 (413)
T PRK15403 349 SASLNMVILMVMAVSVEIGRWLWFN-GGRLPFHLLAVVA 386 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHc-CCchHHHHHHHHH
Confidence 6666666667777777888888654 4455665444443
No 217
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.39 E-value=1.1e-05 Score=80.90 Aligned_cols=159 Identities=14% Similarity=0.047 Sum_probs=114.2
Q ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--cc--hhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCC
Q 016902 92 MVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAY--LG--RYWTIAIFTTIYLAGLTGITLCATMKVFMPNQD 167 (380)
Q Consensus 92 l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~--~G--R~~~i~i~~~l~~lg~~~l~l~~~~~~l~~~~~ 167 (380)
...|+.+++|+++++.....++..+-..+ -++.|.++|.+ +| ||+-++++.++..++.+.+++... .
T Consensus 12 ~~~~l~~~l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~---~----- 82 (433)
T PF03092_consen 12 IYPFLKDDLGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPA---S----- 82 (433)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhccc---c-----
Confidence 44678899999999988777766666655 45779999976 44 445555676666555555544211 0
Q ss_pred cccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHH
Q 016902 168 NCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFT 247 (380)
Q Consensus 168 ~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~ 247 (380)
..+.....+.+++..+|......+.-+..+|....+... ++...++.+....+|++++..
T Consensus 83 ----------------~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~----~g~lqS~~~~~~~~G~lv~~~ 142 (433)
T PF03092_consen 83 ----------------ESSAAIAVVLLFLASFGYAFADVAADALVVELARREPES----RGDLQSFVWGVRSVGSLVGSL 142 (433)
T ss_pred ----------------cchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCch----hHHHHHHHHHHHHHHHHHHHH
Confidence 012344555667788999999999999999988655422 777888888899999999999
Q ss_pred HHHHhhhcchhhHHHHHHHHHHHHHHHHHHhh
Q 016902 248 LVVYIQMEHGWGSAFGALAIAMGISNMLFFIG 279 (380)
Q Consensus 248 i~~~i~~~~gw~~~f~i~~~~~~~~~i~~~~~ 279 (380)
+.|++.+..++++.|.+.+++..+..+..+..
T Consensus 143 l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~~~ 174 (433)
T PF03092_consen 143 LSGPLLDSFGPQGVFLISAALPLLMLIVALFL 174 (433)
T ss_pred hhhhhhhcCCCeEEehHHHHHHHHHHHHHHHh
Confidence 99999998899999988877766554443333
No 218
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.36 E-value=2.1e-05 Score=80.02 Aligned_cols=177 Identities=8% Similarity=0.042 Sum_probs=110.1
Q ss_pred HHHHHHHHHHHhHHHHHHHhcCCCHH----HHHHHHHHHHHHHHHHHHHHHHHHHhhcchhH-------HHHHHHHHHHH
Q 016902 80 AERMAYFGLSVNMVTFMFYVMHKSFA----DSSNAVNNFLGISQASSVLGGFLADAYLGRYW-------TIAIFTTIYLA 148 (380)
Q Consensus 80 ~~~~~~~~i~~~l~~yl~~~~~~s~~----~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~-------~i~i~~~l~~l 148 (380)
+....+......++.|+++..+.+.. ..+.+.+...+...+..++.|.+.||+ |||+ -+.++.++..+
T Consensus 280 ~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl-~~r~~~~~~~~k~~~G~~l~~~ 358 (489)
T PRK10207 280 VFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHL-GSKGKDLSMPMKFTLGMFLCSL 358 (489)
T ss_pred HHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHH-hhCCCCCCcHHHHHHHHHHHHH
Confidence 33344444546677777654333211 122333333334445566678999997 9886 36677777777
Q ss_pred HHHHHHhhhh-cccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhh
Q 016902 149 GLTGITLCAT-MKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHL 227 (380)
Q Consensus 149 g~~~l~l~~~-~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r 227 (380)
+++.+++... ..... ...+..++....++.++|.+...+....+..+..|++. +
T Consensus 359 ~~~~~~~~~~~~~~~~-------------------~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~------~ 413 (489)
T PRK10207 359 GFLTAAAAGMWFADAQ-------------------GLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHL------M 413 (489)
T ss_pred HHHHHHHHHHhhcCCC-------------------CccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHH------H
Confidence 7665543211 00000 01245566677788999999999999999999999877 8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhh----------cchhhHHHHHHHHHHHHHHHHHHhhccc
Q 016902 228 DRFFNFFYLSVTVGAIVAFTLVVYIQM----------EHGWGSAFGALAIAMGISNMLFFIGTPL 282 (380)
Q Consensus 228 ~~~~~~~~~~~~iG~~i~~~i~~~i~~----------~~gw~~~f~i~~~~~~~~~i~~~~~~~~ 282 (380)
+...+.+++...+|..++..+..+... .-.+.+.|...++..++..++++...|+
T Consensus 414 g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~~~~ 478 (489)
T PRK10207 414 GFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMALMVPW 478 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998877765521 1124566665555555555555444443
No 219
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.31 E-value=1.6e-05 Score=79.87 Aligned_cols=158 Identities=15% Similarity=0.075 Sum_probs=112.4
Q ss_pred HHhHHHHHHHhcCCCHHHH-HHHHHHH----HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCC
Q 016902 89 SVNMVTFMFYVMHKSFADS-SNAVNNF----LGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFM 163 (380)
Q Consensus 89 ~~~l~~yl~~~~~~s~~~a-~~~~~~~----~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~ 163 (380)
..+...+....++.+.... ....... .....+..++.|.++|+| |||..+.+..+..++..+.+.+.
T Consensus 41 ~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~-grk~~L~~~~~~~~l~~~~~~~~------- 112 (463)
T KOG2816|consen 41 MTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRY-GRKVVLLLPLFGTILPALCLLFQ------- 112 (463)
T ss_pred hhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhh-hhhhhHHHHHHHHHHhHHHHHHH-------
Confidence 3556666666655543322 2222222 456667778889999998 99999999988888877776653
Q ss_pred CCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHH
Q 016902 164 PNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAI 243 (380)
Q Consensus 164 ~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~ 243 (380)
..++++ +.-..-|.+...+...++++|....+. |...+++.+.+...+..
T Consensus 113 -----------------------~~~~~~-~~~l~g~~~~~~s~~~a~vadis~~~~------R~~~~gll~~~~~~~~~ 162 (463)
T KOG2816|consen 113 -----------------------GYWFFL-LLGLSGGFSAIFSVGFAYVADISSEEE------RSSSIGLLSGTFGAGLV 162 (463)
T ss_pred -----------------------HHHHhh-hcccccchhhhhhhhhhheeeccchhH------HHHHHHHHHHHHHHHHh
Confidence 122222 111122334455677888999988877 99999999998899999
Q ss_pred HHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHHhhccccc
Q 016902 244 VAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYR 284 (380)
Q Consensus 244 i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~~~~~~~~~~ 284 (380)
++|.+++++....|....|.+.++..+++.+......++-.
T Consensus 163 ~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl 203 (463)
T KOG2816|consen 163 IGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESL 203 (463)
T ss_pred HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhcccccc
Confidence 99999999999899999999998888888776666555433
No 220
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.31 E-value=5.7e-05 Score=73.59 Aligned_cols=141 Identities=13% Similarity=0.009 Sum_probs=96.7
Q ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-----hhHHHH-HHHHHHHHHHHHHHhhhhcccCCCCCCccc
Q 016902 97 FYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLG-----RYWTIA-IFTTIYLAGLTGITLCATMKVFMPNQDNCD 170 (380)
Q Consensus 97 ~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~G-----R~~~i~-i~~~l~~lg~~~l~l~~~~~~l~~~~~~c~ 170 (380)
..+++++..-.+..+.+..+...+ .+..|+.||+. + ||..++ .+.++...|..+...+...-. ..
T Consensus 7 IvEL~vpA~lv~~lval~~~~ap~-R~~~G~~SD~~-~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~--~~----- 77 (403)
T PF03209_consen 7 IVELGVPAWLVALLVALHYLVAPL-RVWFGHRSDTH-PSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLA--ES----- 77 (403)
T ss_pred HHHhccHHHHHHHHHHHHHHHHHH-HHHhccccccC-cccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHc--cc-----
Confidence 457888888888888887777764 67889999987 7 665554 455566666555554332110 00
Q ss_pred ccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 016902 171 RISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVV 250 (380)
Q Consensus 171 ~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~~ 250 (380)
.+....+...-.....++..++|+|.+....+..++.+|..|+++ |++..++.+....+|..++..+.+
T Consensus 78 -----~~~~~~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~------R~~~v~ivw~Mli~G~iv~ai~~g 146 (403)
T PF03209_consen 78 -----GQQSSGPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEER------RPRVVAIVWVMLIVGIIVSAIVFG 146 (403)
T ss_pred -----ccccccccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhh------hhhhHHHHHHHHHHHHHHHHHHHH
Confidence 000011111122334445567888888889999999999999888 999999988888899999999888
Q ss_pred Hhhhcch
Q 016902 251 YIQMEHG 257 (380)
Q Consensus 251 ~i~~~~g 257 (380)
.+.+.++
T Consensus 147 ~lL~~~s 153 (403)
T PF03209_consen 147 RLLDPFS 153 (403)
T ss_pred HHccccC
Confidence 7766554
No 221
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.31 E-value=5.4e-05 Score=77.26 Aligned_cols=131 Identities=15% Similarity=0.164 Sum_probs=90.1
Q ss_pred HHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchh
Q 016902 126 GFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIR 205 (380)
Q Consensus 126 g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~ 205 (380)
+++.+|+ +..+.+.++.++..+|++++.+...... . |. ..+..++....++.++|.+...
T Consensus 341 ~~l~~r~-~~~~~~~~G~~l~~l~f~~l~~~~~~~~------~----------~~---~vs~~~~~~~~~l~~~ge~~~~ 400 (500)
T PRK09584 341 NKMGDRL-PMPHKFAIGMVLCSGAFLVLPLGAKFAN------D----------AG---IVSVNWLIASYGLQSIGELMIS 400 (500)
T ss_pred HHhCcCC-CcHHHHHHHHHHHHHHHHHHHHHHHhcC------C----------CC---ccCHHHHHHHHHHHHHHHHHHh
Confidence 4455554 5667788888888888888776532110 0 00 1345567888899999999999
Q ss_pred hhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhh----------cchhhHHHHHHHHHHHHHHHH
Q 016902 206 PCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQM----------EHGWGSAFGALAIAMGISNML 275 (380)
Q Consensus 206 ~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~----------~~gw~~~f~i~~~~~~~~~i~ 275 (380)
|...++..+..|++. |+..++.|+++..+|+.++..+..+... ..++.+.|...+++.++..++
T Consensus 401 p~g~s~~~~~aP~~~------rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~ 474 (500)
T PRK09584 401 GLGLAMVAQLVPQRL------MGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVL 474 (500)
T ss_pred HHHHHHHHHhCcHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHH
Confidence 999999999999887 9999999998888888887766653321 113567777666655544444
Q ss_pred HHhhccc
Q 016902 276 FFIGTPL 282 (380)
Q Consensus 276 ~~~~~~~ 282 (380)
++...++
T Consensus 475 ~~~~~~~ 481 (500)
T PRK09584 475 MLLTAPK 481 (500)
T ss_pred HHHHHHH
Confidence 4443333
No 222
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.25 E-value=4.7e-05 Score=74.69 Aligned_cols=164 Identities=12% Similarity=0.034 Sum_probs=103.6
Q ss_pred CcccCCChHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHH
Q 016902 61 DLSKTGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIA 140 (380)
Q Consensus 61 ~~~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~ 140 (380)
.+.-+++|-.++...+..+...+....+ +....|....++ +...+.+...+|+.++....+.+-|+.|++ |=|.+.+
T Consensus 37 ~rVy~rRW~vLl~~slL~~SN~~qWI~y-a~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~-GLR~a~l 113 (480)
T KOG2563|consen 37 HRVYPRRWVVLLAFSLLNFSNGMQWIQY-APINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKF-GLRTALL 113 (480)
T ss_pred cccchhHhHHHHHHHHHHhcCcchheee-hhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhccc-chHHHHH
Confidence 3455566665555555555443333222 234567777788 666777888899999999999999999998 9999999
Q ss_pred HHHHHHHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCC
Q 016902 141 IFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERS 220 (380)
Q Consensus 141 i~~~l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~ 220 (380)
++..+..+|..+=.++.. |.+.+. .-..+..+|-.+.+...-.+...-.-.-+-.|++++
T Consensus 114 lgt~ln~iGa~Ir~iss~-p~v~~~-------------------f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~q 173 (480)
T KOG2563|consen 114 LGTVLNGIGAWIRLISSL-PFVPPL-------------------FRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQ 173 (480)
T ss_pred HHHHHHHHHHHHhhhccC-cccccc-------------------chhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcch
Confidence 999999999888766532 211111 011234455555555443333222223345678766
Q ss_pred chhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Q 016902 221 KDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQ 253 (380)
Q Consensus 221 ~~~~~~r~~~~~~~~~~~~iG~~i~~~i~~~i~ 253 (380)
|..+...-.++.-+|..++.++...+.
T Consensus 174 ------ra~A~~~~v~~n~LGvavg~llppilV 200 (480)
T KOG2563|consen 174 ------RAIATVLGVMGNPLGVAVGFLLPPILV 200 (480)
T ss_pred ------hhhhhhHHHhcchHHHHHHhhccceec
Confidence 888877766666666666655554443
No 223
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.25 E-value=7.4e-05 Score=72.44 Aligned_cols=156 Identities=13% Similarity=0.079 Sum_probs=112.3
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHh
Q 016902 76 GNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITL 155 (380)
Q Consensus 76 ~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l 155 (380)
+..|+-.-+-..+.+++++|+.+..|++..+++..++.+.++..+|-.++-++-.++ -..|.+.+..++..+-.+...+
T Consensus 243 l~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~-~~~k~Laf~a~~~ill~~~~~l 321 (422)
T COG0738 243 LAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRI-KPEKYLAFYALIAILLLLAVAL 321 (422)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHH
Confidence 333433333344667899999988999999999999999999999999999988887 7777777666554443333333
Q ss_pred hhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHH
Q 016902 156 CATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFY 235 (380)
Q Consensus 156 ~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~ 235 (380)
. .+ ..-+.+++++|+..+.+.|.+.+..-+.++++.+ .++. .-
T Consensus 322 ~----------------------------~g-~v~~~~l~~ig~F~simfPTIfslal~~l~~~ts-----~~s~---~l 364 (422)
T COG0738 322 I----------------------------GG-VVALYALFLIGLFNSIMFPTIFSLALKNLGEHTS-----VGSG---LL 364 (422)
T ss_pred h----------------------------cC-hHHHHHHHHHHHHhHHHHHHHHHHHHhccCcccc-----ccce---ee
Confidence 2 11 2234456788999999999999999999995442 3332 23
Q ss_pred HHHHHHHHHHHHHHHHhhhcchhhHHHH-HHHHHH
Q 016902 236 LSVTVGAIVAFTLVVYIQMEHGWGSAFG-ALAIAM 269 (380)
Q Consensus 236 ~~~~iG~~i~~~i~~~i~~~~gw~~~f~-i~~~~~ 269 (380)
....+|+.+-|.+.|++.|..|-...+. ++..|.
T Consensus 365 ~maivGGAiiP~l~G~i~d~~g~~~~~~~~pllc~ 399 (422)
T COG0738 365 VMAIVGGAIIPPLQGVIADMFGIQLTFLIVPLLCY 399 (422)
T ss_pred eeheecchHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 3456888999999999999988776665 444443
No 224
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.23 E-value=1.3e-05 Score=81.22 Aligned_cols=162 Identities=13% Similarity=0.121 Sum_probs=104.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---cchhHHHHHHHHHH
Q 016902 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAY---LGRYWTIAIFTTIY 146 (380)
Q Consensus 70 ~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~---~GR~~~i~i~~~l~ 146 (380)
.+|...+..++.....|++..+++.|+.+..|++..++.++...+.++..++.++.|+++||. ..++..+..+..++
T Consensus 274 ~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~ 353 (495)
T KOG2533|consen 274 GVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLY 353 (495)
T ss_pred hHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 367788888889999999999999999987789999999999999999999999999999993 26666555554443
Q ss_pred H-HHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhh
Q 016902 147 L-AGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKT 225 (380)
Q Consensus 147 ~-lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~ 225 (380)
. +|.+.+.... .....+.+.+....+.+...++......+......
T Consensus 354 ~~~g~~~l~~~~----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~----- 400 (495)
T KOG2533|consen 354 AIIGAISLLAAA----------------------------VLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNT----- 400 (495)
T ss_pred HHHHHHHHHhhc----------------------------cchHHhHHHHhcchhhHHHHHHHHhhccccccchH-----
Confidence 3 3333333221 11222223333334444444555555555554333
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHH-HHHhhhcchhhHHHHH
Q 016902 226 HLDRFFNFFYLSVTVGAIVAFTL-VVYIQMEHGWGSAFGA 264 (380)
Q Consensus 226 ~r~~~~~~~~~~~~iG~~i~~~i-~~~i~~~~gw~~~f~i 264 (380)
++-+..+.+..+.+.++++++.+ .+.....++|.+.|.+
T Consensus 401 k~~~~~~~~i~~~~s~~~~~~~~~~~~~ap~y~~~~~f~~ 440 (495)
T KOG2533|consen 401 KALTTVSAIIDGTGSAGAISGQLFRSLDAPRYGWGAVFYM 440 (495)
T ss_pred HhHHHHhhhhcchhHHHHhhhhhcccccCcchhhhhHHHH
Confidence 25555555655555555554443 3444555688888843
No 225
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.12 E-value=8.1e-06 Score=78.77 Aligned_cols=166 Identities=13% Similarity=0.025 Sum_probs=115.7
Q ss_pred HHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCC
Q 016902 88 LSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQD 167 (380)
Q Consensus 88 i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~~~~ 167 (380)
.-..++.+..+.+..+.-+.+.......+.+.++..+.|.++||+ |.-+.++...-+.++|.....+-
T Consensus 289 LePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~-~~~~wl~~~~gl~~~G~~~~~iP----------- 356 (464)
T KOG3764|consen 289 LEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKY-PHLRWLLSLGGLATVGVSSGPIP----------- 356 (464)
T ss_pred hCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhc-CchhHHHHHHHHHHHHHHhchhH-----------
Confidence 344566777777775554677777777888899999999999998 94444433333344443222221
Q ss_pred cccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHH
Q 016902 168 NCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFT 247 (380)
Q Consensus 168 ~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~ 247 (380)
.| .+...+++-....+++.+...+...+..+...|.++.++-..-++..++...+.++|..+||+
T Consensus 357 ~~---------------~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~ 421 (464)
T KOG3764|consen 357 FA---------------TSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPT 421 (464)
T ss_pred hh---------------hhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhcccc
Confidence 22 245567777777788888888888888888888766432113678888889999999999999
Q ss_pred HHHHhhhcchhhHHHHHHHHHHHHHHHHHHhhc
Q 016902 248 LVVYIQMEHGWGSAFGALAIAMGISNMLFFIGT 280 (380)
Q Consensus 248 i~~~i~~~~gw~~~f~i~~~~~~~~~i~~~~~~ 280 (380)
+++.+.+..|++|...+.++..++-.-++.+.+
T Consensus 422 ~gg~iv~~iGF~wl~~iig~~n~iyapvl~ll~ 454 (464)
T KOG3764|consen 422 FGGSLVEAIGFEWLMTIIGILNLIYAPVLLLLR 454 (464)
T ss_pred ccchheeehhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999987776666555544444443
No 226
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.09 E-value=1.6e-05 Score=80.37 Aligned_cols=136 Identities=10% Similarity=-0.152 Sum_probs=102.9
Q ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCccccccccc
Q 016902 97 FYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLL 176 (380)
Q Consensus 97 ~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~ 176 (380)
++.+|+++...+.......++..++..+.+.+.+++ +.|+++.++.++..++.+...+......+.. ..
T Consensus 280 ~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~-~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~---gi------- 348 (468)
T TIGR00788 280 TQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTF-PYRLLFGVTTLLYTLSSLFDLILVKRWNLAF---GI------- 348 (468)
T ss_pred cccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhC-CHHHHHHHHHHHHHHHHhCceeeeecccccc---CC-------
Confidence 457899999999999888888999999999998886 9999999999888887655432110000000 00
Q ss_pred CCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 016902 177 GSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEH 256 (380)
Q Consensus 177 ~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~~~ 256 (380)
.....++...++.+++.+........++.+..|++. +++.++++....++|..+++.+++++.+..
T Consensus 349 --------~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~------egt~~al~~s~~~lg~~v~~~~gg~l~~~~ 414 (468)
T TIGR00788 349 --------SDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGC------ESSVFALLASILHLGSSVSGFLGVLLMETI 414 (468)
T ss_pred --------CCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCc------eehHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 011223344466777777777888999999999888 899999999999999999999999998877
Q ss_pred h
Q 016902 257 G 257 (380)
Q Consensus 257 g 257 (380)
|
T Consensus 415 g 415 (468)
T TIGR00788 415 G 415 (468)
T ss_pred C
Confidence 6
No 227
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.08 E-value=0.00039 Score=70.31 Aligned_cols=205 Identities=15% Similarity=-0.002 Sum_probs=132.4
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH-hcCCCHH------HH----HHHHHHHHHHHHHHHHHHHHHHHhhc
Q 016902 65 TGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFY-VMHKSFA------DS----SNAVNNFLGISQASSVLGGFLADAYL 133 (380)
Q Consensus 65 ~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~-~~~~s~~------~a----~~~~~~~~~~~~~~~l~~g~lsD~~~ 133 (380)
+.-++.++.++.++++.-++++.+..+...|+.+ .+|-++. +. .+....+.+...+.+++--++.+++
T Consensus 254 ~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~- 332 (477)
T TIGR01301 254 KYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGW- 332 (477)
T ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 3445688999999999999999888888888874 4553321 11 2333334444455566667788886
Q ss_pred ch-hHHHHHHHHHHHHHHHHHHhhhhccc-CCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhH
Q 016902 134 GR-YWTIAIFTTIYLAGLTGITLCATMKV-FMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSF 211 (380)
Q Consensus 134 GR-~~~i~i~~~l~~lg~~~l~l~~~~~~-l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~ 211 (380)
|+ |++..++.++..++++...+...++. ..+. + + .+.--.+........++...++|+..+.....=.++
T Consensus 333 g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~----~-~---~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal 404 (477)
T TIGR01301 333 GAGKRLWGIVNIILAICLAATVLVTYVAKNSRYY----D-G---DGESLPPPTGIKASALIVFAILGIPLAITYSIPFAL 404 (477)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHhhhhccccc----c-c---cccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHH
Confidence 84 77778888888888877765432110 0000 0 0 000000111223445555667888888888888888
Q ss_pred hhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcch--hhHHHHHHHHHHHHHHHHHHhhccc
Q 016902 212 GADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHG--WGSAFGALAIAMGISNMLFFIGTPL 282 (380)
Q Consensus 212 ~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~~~g--w~~~f~i~~~~~~~~~i~~~~~~~~ 282 (380)
+++..+++. ++.|..+++++.++.+...+..+..+.+.+..| -.+.+.+.++.++++.+..+...|+
T Consensus 405 ~s~~~~~~~----~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~ 473 (477)
T TIGR01301 405 ASIRSSNLG----AGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPR 473 (477)
T ss_pred HHHHccccC----CCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCC
Confidence 888888533 126999999999999999988877777655444 4567777888887777766555443
No 228
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.05 E-value=6.2e-06 Score=80.90 Aligned_cols=179 Identities=15% Similarity=0.050 Sum_probs=121.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHH--------HHHHHHHHHHHH-HHHHHHHHHHhhcchhHHH
Q 016902 69 IAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSS--------NAVNNFLGISQA-SSVLGGFLADAYLGRYWTI 139 (380)
Q Consensus 69 ~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~--------~~~~~~~~~~~~-~~l~~g~lsD~~~GR~~~i 139 (380)
+..+-..+..|+--+++|+...+...-+ +.+++.+.+.. ....+...+.++ +..++.++.|+. ||++..
T Consensus 304 ~~Llgt~~~WFllDiafy~~nL~~s~I~-~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~i-GRk~iq 381 (538)
T KOG0252|consen 304 KHLLGTAGTWFLLDIAFYGQNLFQSVIF-SAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDII-GRKYIQ 381 (538)
T ss_pred HHHHHHHHHHHhhhhhhhccccHHHHHH-HhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehh-hhHHHH
Confidence 4455566677777788887766544433 44555433222 222223333333 555667789997 999999
Q ss_pred HHHHHHHHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHH-HHHHHhccchhhhhhhHhhccCCC
Q 016902 140 AIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVL-YITGFGAAGIRPCVSSFGADQFDE 218 (380)
Q Consensus 140 ~i~~~l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l-~l~g~g~g~~~~~~~~~~ad~f~~ 218 (380)
+.+.+++.+..+.++.. ++. . .+...+++.. +..-++.-|..+.....-+|.||.
T Consensus 382 ~~GF~~~~i~~~~~~~~------------y~~---------~---~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FPa 437 (538)
T KOG0252|consen 382 LMGFFIMTIFFFVIAGP------------YNQ---------L---ENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPA 437 (538)
T ss_pred HhhHHHHHHHHHHHcCC------------ccc---------c---cccCceeehHHHHHHHHhcCCCceeEEeehhhchH
Confidence 99999988877776653 110 0 0111111111 223344455556666777999999
Q ss_pred CCchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhh-----cchhhHHHHHHHHHHHHHHHHHHhh
Q 016902 219 RSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQM-----EHGWGSAFGALAIAMGISNMLFFIG 279 (380)
Q Consensus 219 ~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~-----~~gw~~~f~i~~~~~~~~~i~~~~~ 279 (380)
+. |+.+.++...+.-+|+.++.+...++++ +.|.++.|++.++++.++.++.++.
T Consensus 438 rv------R~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~ 497 (538)
T KOG0252|consen 438 RV------RSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLI 497 (538)
T ss_pred HH------hhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEEe
Confidence 98 9999999999999999999999999998 7889999999999998887765554
No 229
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.03 E-value=0.00021 Score=73.17 Aligned_cols=146 Identities=12% Similarity=0.022 Sum_probs=83.1
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHH
Q 016902 65 TGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTT 144 (380)
Q Consensus 65 ~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~ 144 (380)
+..++.....++..++..++.+....+....+.+..|.+... .....+......++.+++.++.||+ |||+.++.+..
T Consensus 290 ~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~-gRr~lll~s~~ 367 (513)
T KOG0254|consen 290 PKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRF-GRRKLLLFGAA 367 (513)
T ss_pred cchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHhHH
Confidence 334555555555666655554443334444445556665433 3444445555566667778999998 99999999999
Q ss_pred HHHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhh
Q 016902 145 IYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYK 224 (380)
Q Consensus 145 l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~ 224 (380)
...+++++++........... + . .......+....+.+.....+.-+....+.+|.||.+.
T Consensus 368 ~m~~~~~~~~~~~~~~~~~~~---~----------~--~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~---- 428 (513)
T KOG0254|consen 368 GMSICLVILAVVGVFALYYPN---S----------S--KGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRL---- 428 (513)
T ss_pred HHHHHHHHHHHHHHHhccCCC---c----------c--cchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhH----
Confidence 999999888875331110000 0 0 00111122222222233333444555568899999887
Q ss_pred hhhhhHHHH
Q 016902 225 THLDRFFNF 233 (380)
Q Consensus 225 ~~r~~~~~~ 233 (380)
|+.+.++
T Consensus 429 --r~~~~s~ 435 (513)
T KOG0254|consen 429 --RSKGASL 435 (513)
T ss_pred --HhhhHHH
Confidence 6666665
No 230
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.00 E-value=0.0013 Score=66.67 Aligned_cols=173 Identities=14% Similarity=0.052 Sum_probs=94.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHH-HHHHHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchh
Q 016902 108 SNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIF-TTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQ 186 (380)
Q Consensus 108 ~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~-~~l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~ 186 (380)
+...++..+...+..++.|.++|.- |+||.++.. .++..+...++.+. .| .+
T Consensus 73 ~~~~sis~l~~all~P~lGa~aD~~-~~Rk~~l~~~~~~~~~~~~~l~~v------~~--------------------~~ 125 (477)
T PF11700_consen 73 LYANSISGLLQALLAPFLGAIADYG-GRRKRFLLIFTLLGVLATALLWFV------SP--------------------GQ 125 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccc-ccchHHHHHHHHHHHHHHHHHHHh------Cc--------------------ch
Confidence 4566777788888889999999987 776655544 44555555555442 01 23
Q ss_pred HHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhh--------------------hhhhhHHHHHHHHHHHHHHHHH
Q 016902 187 MLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYK--------------------THLDRFFNFFYLSVTVGAIVAF 246 (380)
Q Consensus 187 ~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~--------------------~~r~~~~~~~~~~~~iG~~i~~ 246 (380)
.....+..++..++.++......++..|..+++..... ..|++..++-+...++|+.+..
T Consensus 126 ~~~~~~l~iia~v~~~~~~vfyna~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l 205 (477)
T PF11700_consen 126 WWLALVLFIIANVGYEASNVFYNAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVAL 205 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHH
Confidence 33333333445567777778888999998887652000 0015555555555667776665
Q ss_pred HHHHHhhh--------cchhhHHHHHHHHHHHHHHHH-HHhhccccc-c-cCCCCCccchHHHHHHHHHhhc
Q 016902 247 TLVVYIQM--------EHGWGSAFGALAIAMGISNML-FFIGTPLYR-H-RLPGGSPLTRVAQVLVAAFRKR 307 (380)
Q Consensus 247 ~i~~~i~~--------~~gw~~~f~i~~~~~~~~~i~-~~~~~~~~~-~-~~~~~~~~~~~~~v~~~a~~~r 307 (380)
.+.-.+.. ..+.|..+.+.++..++..+. ++..+++.+ + .++..+.++.-.+-+...+|+.
T Consensus 206 ~i~l~~~~~~~~~~~~~~~~r~~~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~t~k~~ 277 (477)
T PF11700_consen 206 LISLLLVISPGSTASNTWAIRVAFLIVALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRFGFKRLWRTFKEI 277 (477)
T ss_pred HHHHHHHHcCCCccccchhhhHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHHHHHHHHHHHHHH
Confidence 54433311 123477777766665444333 333333322 1 2222233344444445555543
No 231
>PTZ00207 hypothetical protein; Provisional
Probab=97.96 E-value=9.6e-05 Score=76.39 Aligned_cols=173 Identities=12% Similarity=0.048 Sum_probs=122.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHhc-CCCHHH--HHHHHHHHHHHHHHHHHHHHHHHHhhcchhH-------HH
Q 016902 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVM-HKSFAD--SSNAVNNFLGISQASSVLGGFLADAYLGRYW-------TI 139 (380)
Q Consensus 70 ~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~-~~s~~~--a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~-------~i 139 (380)
.+|+++...+|..-+...+..|+ .++-+.+ |.+... ..+.++++.++.++|-+.+|+++ .|+-||+ ++
T Consensus 354 d~Wll~~~~~cg~g~gl~~~~N~-~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~-~~~~~~~~~~r~prt~ 431 (591)
T PTZ00207 354 RLWCLLWSIFCCVGAHFVIIFNA-RFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFE-IWSQKRRAEDRVPITI 431 (591)
T ss_pred hHHHHHHHHHHhhCchheeeecH-HHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHH-HHHHhhccccccchhH
Confidence 46778877777666665555664 5666677 773322 33478999999999999999999 3433333 22
Q ss_pred --HHHHHHHHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCC
Q 016902 140 --AIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFD 217 (380)
Q Consensus 140 --~i~~~l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~ 217 (380)
.+..+ ..++.+++++. + ....++++-+++|++.|...++..+...|+|.
T Consensus 432 ~l~~~~~-~~~~~lll~~~--~--------------------------p~~~L~~~~~lvg~~~G~~~~~~~~i~selFg 482 (591)
T PTZ00207 432 ALFIPSV-CIITMLTLFLT--L--------------------------PKAALPLPYFIAAFANGFMAATIALVTRTIFA 482 (591)
T ss_pred HHHHHHH-HHHHHHHHHHH--C--------------------------CccHhHHHHHHHHHHhhHhHHHHHHHHHHHhc
Confidence 22333 55555555553 0 11468999999999999999999999999999
Q ss_pred CCCchhhhhhhhHHHHHHHHHHHHHHHH-HHHHHHhhhc----------ch---hhHHHHHHHHHHHHHHHHHHhhc
Q 016902 218 ERSKDYKTHLDRFFNFFYLSVTVGAIVA-FTLVVYIQME----------HG---WGSAFGALAIAMGISNMLFFIGT 280 (380)
Q Consensus 218 ~~~~~~~~~r~~~~~~~~~~~~iG~~i~-~~i~~~i~~~----------~g---w~~~f~i~~~~~~~~~i~~~~~~ 280 (380)
++ -+.-+|..+.+.-+|+.+- -.+.|++.|. .| ++.+|.+.+++.++++++-....
T Consensus 483 -k~------~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l~ 552 (591)
T PTZ00207 483 -KD------PAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTYVH 552 (591)
T ss_pred -cc------hHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhhee
Confidence 77 7999999888888887663 5666766542 12 78889888887777776654443
No 232
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.87 E-value=0.0002 Score=53.64 Aligned_cols=66 Identities=18% Similarity=0.003 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHH
Q 016902 78 EMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTI 145 (380)
Q Consensus 78 ~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l 145 (380)
.++...+...+..+++.|+. +.|++..+.+.+.++..+...++++++|+++|++ ||++.++....+
T Consensus 9 yf~~f~~~g~~~Pfl~~~~~-~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~-~~~~~~l~~~~~ 74 (77)
T PF12832_consen 9 YFFYFAALGCLYPFLPLYLK-QLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKF-GKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHHhhhhHhhh-hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CccHHHHHHHHH
Confidence 33333444456677888887 5899999999999999999999999999999998 988887776554
No 233
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=97.85 E-value=0.00077 Score=70.83 Aligned_cols=82 Identities=9% Similarity=0.076 Sum_probs=66.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHhhcc--hhHHHHHHHHHH
Q 016902 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLG-ISQASSVLGGFLADAYLG--RYWTIAIFTTIY 146 (380)
Q Consensus 70 ~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~-~~~~~~l~~g~lsD~~~G--R~~~i~i~~~l~ 146 (380)
..+...+..++....++++.++++.|+++++|++..+++.+.....+ +..++.+++|+++||+ + .++.+.++.++.
T Consensus 331 ~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~-~~~~~~~~~~~~~~~ 409 (633)
T TIGR00805 331 IYMLVILAQVIDSLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKF-KLNVKKAAYFAICLS 409 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeee-cccHHHHHHHHHHHH
Confidence 45667777788888999999999999999999999999988877655 5678999999999997 7 356666666666
Q ss_pred HHHHHH
Q 016902 147 LAGLTG 152 (380)
Q Consensus 147 ~lg~~~ 152 (380)
++++++
T Consensus 410 ~~~~~~ 415 (633)
T TIGR00805 410 TLSYLL 415 (633)
T ss_pred HHHHHH
Confidence 665444
No 234
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=97.83 E-value=4.6e-08 Score=97.79 Aligned_cols=185 Identities=15% Similarity=0.093 Sum_probs=106.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHH
Q 016902 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (380)
Q Consensus 70 ~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg 149 (380)
.....+....+..+..+....+...++.+..+.+.. -.......+...++.+++.++.|++ |||+.++++.++..+.
T Consensus 253 ~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-GRr~~~i~~~~~~~~~ 329 (451)
T PF00083_consen 253 RLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRF-GRRKLLIIGLLLMAIC 329 (451)
T ss_pred cccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccc-cccccccccccccccc
Confidence 344444444444444433444455556666777665 1222233344556667778999997 9999999988877766
Q ss_pred HHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHH-HHhccchhhhhhhHhhccCCCCCchhhhhhh
Q 016902 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYIT-GFGAAGIRPCVSSFGADQFDERSKDYKTHLD 228 (380)
Q Consensus 150 ~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~-g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~ 228 (380)
.+.+..... ..++ .+ +..+... ++...+. .....+..+....+.+|.||.+. |+
T Consensus 330 ~~~~~~~~~---~~~~--------------~~-~~~~~~~-i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~------R~ 384 (451)
T PF00083_consen 330 SLILGIIFF---LGVS--------------SS-SWWSILS-IVFLALFFAFFSLGWGPLPWIYTAELFPTKV------RS 384 (451)
T ss_pred ccccccccc---cccc--------------cc-ccccccc-ceeeeeccccccccccccccccccccccccc------cc
Confidence 665541000 0000 00 0001111 1112122 12222444566688899999998 99
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHHhhccc
Q 016902 229 RFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPL 282 (380)
Q Consensus 229 ~~~~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~~~~~~~~ 282 (380)
++.++.+....+++.+++.+..++.++.+-...|.+.++++++..++.+...|+
T Consensus 385 ~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lpE 438 (451)
T PF00083_consen 385 TGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLPE 438 (451)
T ss_pred cccccccccccccccccccccccccccccccccchhhHHHHHHHHhheeEEEee
Confidence 999998887888888888888777776663445555555555555544443333
No 235
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.82 E-value=0.0011 Score=56.68 Aligned_cols=106 Identities=15% Similarity=0.211 Sum_probs=75.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhH
Q 016902 108 SNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQM 187 (380)
Q Consensus 108 ~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~ 187 (380)
....++..+...+..++...+.+++ |.|++++++.+.+.+-.+.... .+.
T Consensus 40 ~~slai~Y~~~~~s~l~~P~iv~~l-g~K~sm~lg~~~y~~y~~~~~~-----------------------------~~~ 89 (156)
T PF05978_consen 40 YYSLAILYGSFAISCLFAPSIVNKL-GPKWSMILGSLGYAIYIASFFY-----------------------------PNS 89 (156)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHh-----------------------------hhH
Confidence 3445555566666777777888886 9999999999988866554332 345
Q ss_pred HHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 016902 188 LYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLV 249 (380)
Q Consensus 188 ~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~ 249 (380)
..++.+-.+.|+|.+........++.+..+++. +++..+++......+.++|.++.
T Consensus 90 ~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~------~~~~~~ifw~i~~~s~i~G~~~~ 145 (156)
T PF05978_consen 90 YTLYPASALLGFGAALLWTAQGTYLTSYSTEET------IGRNTGIFWAIFQSSLIFGNLFL 145 (156)
T ss_pred HHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHH------HhhHHHHHHHHHHHHHHHHHHHH
Confidence 677888889999999999999999988776555 66666665555555555554443
No 236
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.80 E-value=0.00058 Score=70.52 Aligned_cols=155 Identities=12% Similarity=0.039 Sum_probs=102.8
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHH---HHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHH-HH
Q 016902 66 GGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFA---DSSNAVNNFLGISQASSVLGGFLADAYLGRYWTI-AI 141 (380)
Q Consensus 66 ~~~~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~---~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i-~i 141 (380)
+..|.+...++..++..+.+|++....+.+....++-+.. ..+.....+..+..++.++.|.+.-++ ||.|.. ++
T Consensus 307 ~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~i-r~~Kw~li~ 385 (599)
T PF06609_consen 307 KDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKI-RHIKWQLIF 385 (599)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHc-cchhHHHHH
Confidence 3356677777788888888888888888888777766653 455666667777777888888888765 886554 56
Q ss_pred HHHHHHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCc
Q 016902 142 FTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSK 221 (380)
Q Consensus 142 ~~~l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~ 221 (380)
++++++++...++.. .++ +....+...++.++|.|+..........-..|+++
T Consensus 386 ~~~~~ta~~Gama~~------~~~--------------------n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~- 438 (599)
T PF06609_consen 386 GSVLMTAFCGAMAAV------RPD--------------------NKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDED- 438 (599)
T ss_pred HHHHHHHHHHHHHHc------cCC--------------------CcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchH-
Confidence 666666555554432 111 22223445567788887766555444433445544
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Q 016902 222 DYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQ 253 (380)
Q Consensus 222 ~~~~~r~~~~~~~~~~~~iG~~i~~~i~~~i~ 253 (380)
.+...++....-.+|+.++..+..-+.
T Consensus 439 -----ig~a~gL~~s~R~~GGsIg~aIy~~I~ 465 (599)
T PF06609_consen 439 -----IGTATGLTGSIRSIGGSIGYAIYNAIF 465 (599)
T ss_pred -----HHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 889988888888888888877765543
No 237
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=97.74 E-value=0.00026 Score=70.95 Aligned_cols=157 Identities=8% Similarity=-0.064 Sum_probs=110.8
Q ss_pred HHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCC
Q 016902 88 LSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQD 167 (380)
Q Consensus 88 i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~~~~ 167 (380)
+.+++--+++ +++-....-+.....-.++-.+.-++.++|..++ |+-+++.+++.+..+=++.+...
T Consensus 390 v~tFLfWHle-d~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~ki-GHv~v~~lgLa~~~~Rf~~~S~L----------- 456 (618)
T KOG3762|consen 390 VFTFLFWHLE-DLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKI-GHVNVMYLGLACNVGRFLYYSYL----------- 456 (618)
T ss_pred HHHHHHHHHh-hcCCcceeeeehhhhhccchHHHHHHHHHHHHHh-cccceeeehhhHHHHHHHHHHHh-----------
Confidence 3344433443 4443333333333333444555566778999997 99999999988887766665553
Q ss_pred cccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHH-HHHHHHHHHH
Q 016902 168 NCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYL-SVTVGAIVAF 246 (380)
Q Consensus 168 ~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~-~~~iG~~i~~ 246 (380)
.|.++.+..-++.|+..+.+..++.+|+.+..|++- ++++-++... .-.+|-.+|.
T Consensus 457 -----------------~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l------~at~Q~l~~g~f~GlG~g~Gs 513 (618)
T KOG3762|consen 457 -----------------QNPWMVLPIEILQGITHALIWAAIISYASHVAPPGL------RATAQGLLQGIFHGLGKGLGS 513 (618)
T ss_pred -----------------cCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcc------hHHHHHHHHHHhcccCcchhh
Confidence 456667777789999999999999999999999887 7777776443 2346667777
Q ss_pred HHHHHhhhcchhhHHHHHHHHHHHHHHHHHHhhc
Q 016902 247 TLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGT 280 (380)
Q Consensus 247 ~i~~~i~~~~gw~~~f~i~~~~~~~~~i~~~~~~ 280 (380)
+|++.+.+.+|-+..|.+.+++.++.++.+....
T Consensus 514 lIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~iq 547 (618)
T KOG3762|consen 514 LIGGFVVERFGARTTFRIFGIACLVTLALFISIQ 547 (618)
T ss_pred hhhhhhheeehhHHHHHHHHHHHHHHHHHHHHhh
Confidence 8888888888888888888887777766665543
No 238
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=97.54 E-value=0.0006 Score=65.11 Aligned_cols=86 Identities=10% Similarity=0.064 Sum_probs=71.1
Q ss_pred hhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhc---------
Q 016902 185 WQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQME--------- 255 (380)
Q Consensus 185 ~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~~--------- 255 (380)
.+...++++.+++|.|.+..++...+++++..++++ +.+.+|+......+|..++|.+++.+...
T Consensus 8 ~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~------~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~ 81 (310)
T TIGR01272 8 RYYVLFLGALFVLASGLTILQVAANPYVSILGPIET------AASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQV 81 (310)
T ss_pred hHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcch------HHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhh
Confidence 467889999999999999999999999999999877 88899999999999999999999977631
Q ss_pred -------chhhHHHHHHHHHHHHHHHHH
Q 016902 256 -------HGWGSAFGALAIAMGISNMLF 276 (380)
Q Consensus 256 -------~gw~~~f~i~~~~~~~~~i~~ 276 (380)
..|+++|++.+++..+..+++
T Consensus 82 ~~~~~~~~~~~~~yl~ia~~~~~~~i~~ 109 (310)
T TIGR01272 82 ATANAEAAKVHTPYLLLAGALAVLAIIF 109 (310)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 368889886655544444433
No 239
>PRK03612 spermidine synthase; Provisional
Probab=97.52 E-value=0.018 Score=59.05 Aligned_cols=167 Identities=11% Similarity=0.069 Sum_probs=88.8
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHH-HHHHHHh
Q 016902 77 NEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLA-GLTGITL 155 (380)
Q Consensus 77 ~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~l-g~~~l~l 155 (380)
..++..++..+.-....-.+...+|-+....+.+++++.++..+|..+++.++++...++..+.+...+... ...++..
T Consensus 22 ~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~~~e~~i~l~~~~~~~ll~~ 101 (521)
T PRK03612 22 AVFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFVAVELLLALLGGLSALILYA 101 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444444444444556677778988889999999999999999999988875432222222211111111 1111111
Q ss_pred hhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHH
Q 016902 156 CATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFY 235 (380)
Q Consensus 156 ~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~ 235 (380)
.... .. .....++...++.++..|+..|.+..+..+... ++ -+...+-.|
T Consensus 102 ~~~~---~~--------------------~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~~-~~------~g~~~g~ly 151 (521)
T PRK03612 102 AFAF---QG--------------------LSRLLLYVLVLLIGLLIGMEIPLLMRILQRIRD-QH------LGHNVATVL 151 (521)
T ss_pred HHHH---HH--------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-cc------hhhhhhhhH
Confidence 1000 00 011122233345566666666665555443222 11 345566777
Q ss_pred HHHHHHHHHHHHHHHHhh-hcchh-hHHHHHHHHHHHHHH
Q 016902 236 LSVTVGAIVAFTLVVYIQ-MEHGW-GSAFGALAIAMGISN 273 (380)
Q Consensus 236 ~~~~iG~~i~~~i~~~i~-~~~gw-~~~f~i~~~~~~~~~ 273 (380)
....+|+++|.++.+++. ...|- +..+.+..+..++++
T Consensus 152 ~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~ 191 (521)
T PRK03612 152 AADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAAL 191 (521)
T ss_pred hHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 788888888888887654 45663 333333333333443
No 240
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=97.49 E-value=0.00033 Score=68.95 Aligned_cols=167 Identities=13% Similarity=0.094 Sum_probs=109.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---cchhHHHHHH-HH
Q 016902 69 IAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAY---LGRYWTIAIF-TT 144 (380)
Q Consensus 69 ~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~---~GR~~~i~i~-~~ 144 (380)
+.++.+..+.+...+++..=.+++++|++ .+|++.+-.+.+-..--+...+.+++.|..|||. +||||.++.. .+
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~-~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~ 110 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQ-SLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSL 110 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHH-HcCCCcccccccccccccccceecccccccccccccccccccchHHHhhH
Confidence 55565665666555665555567778876 6788877766665555566677788889999965 6998776654 45
Q ss_pred HHHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhh
Q 016902 145 IYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYK 224 (380)
Q Consensus 145 l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~ 224 (380)
...++++++..++-+..+. |++ .-.+.......+++++..+.=+..-..+...-++.+|....++.
T Consensus 111 ~i~~~l~Lig~aaDig~~l-----gd~------~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~--- 176 (498)
T KOG0637|consen 111 LIAVSLFLIGYAADIGLLL-----GDN------ERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAK--- 176 (498)
T ss_pred HHHHHHhhhhhHhhhhHHh-----cCC------cccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhh---
Confidence 5566666555543321111 110 00112224566778888888888888889999999999986552
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHh
Q 016902 225 THLDRFFNFFYLSVTVGAIVAFTLVVYI 252 (380)
Q Consensus 225 ~~r~~~~~~~~~~~~iG~~i~~~i~~~i 252 (380)
++| +.+++.+...+|..+|...++|.
T Consensus 177 ~~~--Ans~f~~f~avGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 177 KTR--ANSVFSFFMAVGNVLGYALGSYL 202 (498)
T ss_pred hhc--cchhHHHHHHhcceeeeeccccc
Confidence 122 77788888888888887776654
No 241
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.46 E-value=6.3e-06 Score=76.16 Aligned_cols=156 Identities=13% Similarity=0.170 Sum_probs=116.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHH
Q 016902 69 IAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLA 148 (380)
Q Consensus 69 ~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~l 148 (380)
-+..+.++..|...+.+- --..+.+++..+.+++.++..++.++|+.-..+.+.++|++.||.+|-|..-++-+.+..+
T Consensus 44 m~lv~mc~lgfgsyfcyd-~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~ 122 (459)
T KOG4686|consen 44 MALVFMCLLGFGSYFCYD-APGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFL 122 (459)
T ss_pred HHHHHHHHhcccceeecC-CchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHH
Confidence 344444444444333321 2234566777777777777888888888888899999999999999988877777777778
Q ss_pred HHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhh
Q 016902 149 GLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLD 228 (380)
Q Consensus 149 g~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~ 228 (380)
|.++++..... ...+++..+|++.|+|.-........+..-.|..++ ..
T Consensus 123 GqliFa~Ggi~-------------------------~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKE------Ln 171 (459)
T KOG4686|consen 123 GQLIFAAGGIS-------------------------HAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKE------LN 171 (459)
T ss_pred HHHHHHhchHH-------------------------HHHHHHHhhheeeccCchhhhhhhcceeEEEecCcc------cc
Confidence 88777654220 357788999999999987777777888888898777 89
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 016902 229 RFFNFFYLSVTVGAIVAFTLVVYIQMEH 256 (380)
Q Consensus 229 ~~~~~~~~~~~iG~~i~~~i~~~i~~~~ 256 (380)
-.|++..-...+|+.+...+.+++.+..
T Consensus 172 ~vfGlqlSvAR~GstvNf~lm~~ly~~~ 199 (459)
T KOG4686|consen 172 FVFGLQLSVARLGSTVNFLLMPFLYDTM 199 (459)
T ss_pred chhhHHHHHHHhhceeeeeecHHHHHHH
Confidence 9999988888888888777777776654
No 242
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.35 E-value=0.041 Score=55.56 Aligned_cols=168 Identities=10% Similarity=0.054 Sum_probs=91.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCC-----HHHHHHHHHHHHHHHHHH-HHHHHHHHHhhcchhHHHHH
Q 016902 68 WIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKS-----FADSSNAVNNFLGISQAS-SVLGGFLADAYLGRYWTIAI 141 (380)
Q Consensus 68 ~~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s-----~~~a~~~~~~~~~~~~~~-~l~~g~lsD~~~GR~~~i~i 141 (380)
++.++...+..|+-.+.++.+- -+.+.+..+ ......+-+...+...+. .++.+++++++ +|++.+.+
T Consensus 6 ~~k~~~~~l~fF~il~~Y~iLR-----~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~-~~~~lf~~ 79 (472)
T TIGR00769 6 LKKFLPLFLMFFCILFNYTILR-----DTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNIL-SKEALFYT 79 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-----hhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcC-CHHHhHHH
Confidence 4556666666666666655322 244555553 233334434333333333 67789999998 99998887
Q ss_pred HHHHHHHHHHHHHhhhh--cccCCCCCCcccccccccCCCCCCcchhH------HHHHHHHHH-HHHhccchhh-hhhhH
Q 016902 142 FTTIYLAGLTGITLCAT--MKVFMPNQDNCDRISQLLGSCEPAKSWQM------LYLYTVLYI-TGFGAAGIRP-CVSSF 211 (380)
Q Consensus 142 ~~~l~~lg~~~l~l~~~--~~~l~~~~~~c~~~~~~~~~c~~~~~~~~------~~l~~~l~l-~g~g~g~~~~-~~~~~ 211 (380)
....+.+..+++++.-. -..++|+ ..|+.. .-..+..... .+.+...++ ..+-...... .-.++
T Consensus 80 ~~~~F~~~f~lF~~vl~p~~~~~~p~-~~~~~~-----~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~f 153 (472)
T TIGR00769 80 VISPFLGFFALFAFVIYPLSDLLHPT-ALADKL-----LSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGF 153 (472)
T ss_pred HHHHHHHHHHHHHHHHhcchhhcCCc-HHHHHH-----HhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76666665555554321 0111111 011100 0000000000 001111121 2222233333 67889
Q ss_pred hhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Q 016902 212 GADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQ 253 (380)
Q Consensus 212 ~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~~~i~ 253 (380)
..|.+..++ -.+++.++..+.++|..+++.+..++.
T Consensus 154 andi~t~~q------akRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 154 ANQITTIDE------AKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHhcCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999766 789999999999999999999888875
No 243
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=97.34 E-value=0.019 Score=58.72 Aligned_cols=146 Identities=12% Similarity=0.094 Sum_probs=90.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHH
Q 016902 69 IAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLA 148 (380)
Q Consensus 69 ~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~l 148 (380)
+....+++..+...+.+|+...+ ...+|.+......+... ....+....+.+-|++ |||.....+.++..+
T Consensus 322 ~~~~~~~~~~~~~~~~y~gl~~~-----~~~lg~~~~~~~~~~~~---~~~p~~~~~~~~~~~~-gR~~~~~~~~~~~~~ 392 (521)
T KOG0255|consen 322 YRTLYLLFIWFVFSLVYYGLSLN-----VSGLGGNIYLNFTLSGL---VELPAYFRNGLLLPEF-GRRPPLFLSLFLAGI 392 (521)
T ss_pred HHHHHHHHHHHHHhHHHHhhhhh-----hhhcCchHHHHHHHHHH---HHhhHHHHHHHHHHHh-CcHHHHHHHHHHHHH
Confidence 34444444444445555544333 33455544333333222 3333444557889997 999999999999888
Q ss_pred HHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhh
Q 016902 149 GLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLD 228 (380)
Q Consensus 149 g~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~ 228 (380)
+.+..+.... . .+.....+...+..++.+....+...+.+|++|+.. |.
T Consensus 393 ~~~~~~~~~~-----~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~------r~ 441 (521)
T KOG0255|consen 393 GLLLFGWLPD-----D--------------------LGGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTVV------RN 441 (521)
T ss_pred HHHHHHHhhc-----c--------------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHH------HH
Confidence 8888776421 0 110122222233334444445556888899999888 99
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhh
Q 016902 229 RFFNFFYLSVTVGAIVAFTLVVYIQM 254 (380)
Q Consensus 229 ~~~~~~~~~~~iG~~i~~~i~~~i~~ 254 (380)
.+.+.......+|++++|.+......
T Consensus 442 ~~~~~~~~~~~~~~i~ap~~~~~~~~ 467 (521)
T KOG0255|consen 442 TAVGAISAAARLGSILAPLFPLLLRQ 467 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999887654443
No 244
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.26 E-value=0.0079 Score=63.28 Aligned_cols=182 Identities=12% Similarity=-0.086 Sum_probs=133.4
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCcccccccccCCC
Q 016902 100 MHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSC 179 (380)
Q Consensus 100 ~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c 179 (380)
.+...........++....++.+++....+|...|+...+....+.++++.+...+.+.. .. +
T Consensus 15 ~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~-a~-~--------------- 77 (654)
T TIGR00926 15 LNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFG-AI-P--------------- 77 (654)
T ss_pred HHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhc-cC-c---------------
Confidence 344445567888999999999999999999999888889999888899888888776431 11 0
Q ss_pred CCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcch-h
Q 016902 180 EPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHG-W 258 (380)
Q Consensus 180 ~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~~~g-w 258 (380)
.........++++.++++.+|..++.+.+.+++++.-+ ..++...+++|++..+.+.+. .+++..+..... +
T Consensus 78 ---~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~---~~~~~~~~s~F~~fY~~iNiG-Slis~~i~~~l~~~ 150 (654)
T TIGR00926 78 ---SSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFE---ERQLSLRSRFFSFFYFAINAG-SLISTIITPILRGD 150 (654)
T ss_pred ---ccccchHHHHHHHHHHHHHhhccccccCchhhhHhhcC---ccchhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHh
Confidence 11334455667788999999999999999999998543 555678999999999887765 466666665443 3
Q ss_pred hH------HH-HHHHHHHHHHHHHHHhhcccccccCCCCCccchHHHHHHHHHh
Q 016902 259 GS------AF-GALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFR 305 (380)
Q Consensus 259 ~~------~f-~i~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~ 305 (380)
.. +| +..++.+++.++.++.....++..++.+.+...+.+++..++.
T Consensus 151 ~~~fg~~~~~~~aF~i~~i~m~ia~lvf~~g~k~y~~~~p~gs~l~~v~~vi~~ 204 (654)
T TIGR00926 151 VGCFGCQDCYPLAFGVPAILMILALIVFMAGSKMYKKKPPKGNIVSKVIKCIVT 204 (654)
T ss_pred hcccccCcchHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHHHHHH
Confidence 22 23 3566667777777788877777777776665556666554443
No 245
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.24 E-value=0.029 Score=57.12 Aligned_cols=89 Identities=16% Similarity=0.045 Sum_probs=64.9
Q ss_pred HHHHHHHHHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCC
Q 016902 139 IAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDE 218 (380)
Q Consensus 139 i~i~~~l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~ 218 (380)
+.++.++..++.+++.++..... + ....+..++++..++.++|.-...|...+++++..|+
T Consensus 348 fa~g~~~~g~~f~~l~~~~~~~~---~----------------~~~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~ 408 (493)
T PRK15462 348 FALGLGLMSAGFCILTLSARWSA---M----------------YGHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIP 408 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcC---C----------------CCCcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChH
Confidence 56677777778777766533110 0 0013566677788889999999999999999999998
Q ss_pred CCchhhhhhhhHHHHHHHH-HHHHHHHHHHHHHHh
Q 016902 219 RSKDYKTHLDRFFNFFYLS-VTVGAIVAFTLVVYI 252 (380)
Q Consensus 219 ~~~~~~~~r~~~~~~~~~~-~~iG~~i~~~i~~~i 252 (380)
+. ++..++.|+.. ..+|..++..+..+.
T Consensus 409 ~~------~g~~mg~w~l~~~~~~~~~~g~~~~~~ 437 (493)
T PRK15462 409 GV------TGVLTGIYMLLSGAIANYLAGVIADQT 437 (493)
T ss_pred HH------HHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 88 99999998774 467777776666655
No 246
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=97.11 E-value=0.043 Score=54.17 Aligned_cols=156 Identities=9% Similarity=0.006 Sum_probs=94.0
Q ss_pred HHhHHHHHHHh-cCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCCCC
Q 016902 89 SVNMVTFMFYV-MHKSFADSSNAVN-NFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQ 166 (380)
Q Consensus 89 ~~~l~~yl~~~-~~~s~~~a~~~~~-~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~~~ 166 (380)
-+++..|+.+. .|++..+..+-+. ++.-.....-++...++|.. |-|++++++.+..++...++...
T Consensus 23 EPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l-~Ykpviil~~~~~i~t~~lll~~---------- 91 (412)
T PF01770_consen 23 EPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYL-RYKPVIILQALSYIITWLLLLFG---------- 91 (412)
T ss_pred CccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHHHH----------
Confidence 45688999987 8999888764332 23333333445567899976 88888888888777776666553
Q ss_pred CcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHH
Q 016902 167 DNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAF 246 (380)
Q Consensus 167 ~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~ 246 (380)
.+...+-+.-++.|++.+. .....+++=-..|+++ -.+..+.-..+..+|-.++.
T Consensus 92 ------------------~sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~------yq~vts~~raa~l~g~~~s~ 146 (412)
T PF01770_consen 92 ------------------TSVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEH------YQKVTSYTRAATLVGRFISS 146 (412)
T ss_pred ------------------CcHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHH------HHHHHHHHHHHHHHHHHHHH
Confidence 2455566666777776654 3444455444444333 33344444444555555555
Q ss_pred HHHHHhhh--cchhhHHHHHHHHHHHHHHHHHHhhc
Q 016902 247 TLVVYIQM--EHGWGSAFGALAIAMGISNMLFFIGT 280 (380)
Q Consensus 247 ~i~~~i~~--~~gw~~~f~i~~~~~~~~~i~~~~~~ 280 (380)
+++-.+.. ..++...+.+..+...+++++.++.+
T Consensus 147 ~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP 182 (412)
T PF01770_consen 147 LLGQLLVSFGGVSYFQLNYISLASVSLALLIALFLP 182 (412)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 55444433 34566677777777777766655443
No 247
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.04 E-value=0.0036 Score=61.76 Aligned_cols=181 Identities=13% Similarity=0.081 Sum_probs=101.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhH-HHHHHHHHHHHH
Q 016902 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYW-TIAIFTTIYLAG 149 (380)
Q Consensus 71 ~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~-~i~i~~~l~~lg 149 (380)
..+++....+....+++..+.+ .-....-|++...++.+.....+.+.++.++.|.++||. ..++ ++++......++
T Consensus 268 F~il~~~ygi~~g~F~~l~~~l-~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dkt-k~fk~~~~v~~~~~~v~ 345 (480)
T KOG2563|consen 268 FIILAICYGIGLGLFNSLSTLL-NLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKT-KKFKLTTLVLYLFALVG 345 (480)
T ss_pred HHHHHHHHhhhHHHHHHHHHHh-hhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhh-hhHHHHHHHHHHHHHHH
Confidence 3444444444444455444432 222335577878889999999999999999999999997 5554 444444445555
Q ss_pred H-HHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhcc-CCCCCchhhhhh
Q 016902 150 L-TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQ-FDERSKDYKTHL 227 (380)
Q Consensus 150 ~-~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~-f~~~~~~~~~~r 227 (380)
. .+..... . .| ....++....+.|++..+..|.-.-++.|. ||..+
T Consensus 346 ~~~l~~~t~-----~----~~----------------~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E------- 393 (480)
T KOG2563|consen 346 TLMLLTCTL-----F----LG----------------DSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAE------- 393 (480)
T ss_pred HHHHHHhhc-----c----CC----------------ceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCC-------
Confidence 3 2222210 0 11 233455566677777778788777777776 44433
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhcch---hhHH-HHHHHHHHHHHHHHHHhhcccccc
Q 016902 228 DRFFNFFYLSVTVGAIVAFTLVVYIQMEHG---WGSA-FGALAIAMGISNMLFFIGTPLYRH 285 (380)
Q Consensus 228 ~~~~~~~~~~~~iG~~i~~~i~~~i~~~~g---w~~~-f~i~~~~~~~~~i~~~~~~~~~~~ 285 (380)
+.-.++.++...+-+.+-.++.+...+..+ |.++ -+..+..+.+.+++..+.++.|+.
T Consensus 394 ~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~y~R 455 (480)
T KOG2563|consen 394 GTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPDYRR 455 (480)
T ss_pred cccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhhHHh
Confidence 333344444444444444555566665554 3332 233344444455555555665544
No 248
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=96.97 E-value=0.024 Score=55.72 Aligned_cols=124 Identities=14% Similarity=0.006 Sum_probs=78.6
Q ss_pred HhHHHHHHHhcCC---CHH----HHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHH-HHHHHHHHHHHHHHHhhhhccc
Q 016902 90 VNMVTFMFYVMHK---SFA----DSSNAVNNFLGISQASSVLGGFLADAYLGRYWTI-AIFTTIYLAGLTGITLCATMKV 161 (380)
Q Consensus 90 ~~l~~yl~~~~~~---s~~----~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i-~i~~~l~~lg~~~l~l~~~~~~ 161 (380)
..++.|+++..+. +.. ..+...++..+..++..++.|-++|.. |+||.. -+...+-++.+.++...
T Consensus 36 ~ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~~-g~Rk~~~~~f~~i~i~~~~~L~~i----- 109 (438)
T COG2270 36 FIFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADYP-GPRKKFFGFFTAIGIISTFLLWFI----- 109 (438)
T ss_pred ehhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhccC-CCcchHHHHHHHHHHHHHHHHHHh-----
Confidence 3467788777655 332 334566677777778888899999998 866544 44555555555555553
Q ss_pred CCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHH
Q 016902 162 FMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVG 241 (380)
Q Consensus 162 l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG 241 (380)
++ +.++....+.+.+..++..+......++..|..++++-+ |.+..+| -...+|
T Consensus 110 --~~------------------~s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~~~----riS~lg~--~~gylg 163 (438)
T COG2270 110 --PP------------------GSYLLLLLLFLILASIGFEFSNVFYDSMLPRLTTKDNMG----RISGLGW--ALGYLG 163 (438)
T ss_pred --CC------------------CchHHHHHHHHHHHHHhcchhheehhhHhhhhcCccccC----ccccccc--cccccc
Confidence 11 024455555566778888888889999999998876622 4444443 233444
Q ss_pred HHHH
Q 016902 242 AIVA 245 (380)
Q Consensus 242 ~~i~ 245 (380)
+.+.
T Consensus 164 s~i~ 167 (438)
T COG2270 164 SVIL 167 (438)
T ss_pred chHH
Confidence 4443
No 249
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.95 E-value=0.018 Score=55.87 Aligned_cols=152 Identities=14% Similarity=0.118 Sum_probs=108.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHH-HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHH
Q 016902 69 IAALFIFGNEMAERMAYFGLSVNMVTFM-FYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYL 147 (380)
Q Consensus 69 ~~~~~i~~~~~~~~~~~~~i~~~l~~yl-~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~ 147 (380)
..++.++....+.....|....+...++ ...+|+++.+.+...+.-..+..+..+.-++..|++.|.-+..+.-.++.+
T Consensus 260 i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~ 339 (451)
T KOG2615|consen 260 ISVLRIFGLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLI 339 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHH
Confidence 3566666666555555555666666666 467999999998777776666666777777888887554333333333322
Q ss_pred H-HHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhh
Q 016902 148 A-GLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTH 226 (380)
Q Consensus 148 l-g~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~ 226 (380)
+ ..+++... .....++++..+..+..+...+|+..+.....|...
T Consensus 340 vP~~llls~~----------------------------~~~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~q------ 385 (451)
T KOG2615|consen 340 VPAFLLLSLA----------------------------RTPVVLYLGSTLKSFSTASVVTCLTSLVHKYGPQSQ------ 385 (451)
T ss_pred HHHHHHHhcc----------------------------ccchhhhHHHHHHHHHHHHhhHHHHHHHHhcCCccc------
Confidence 2 22222222 234568888888899988999999999999988777
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhhh
Q 016902 227 LDRFFNFFYLSVTVGAIVAFTLVVYIQM 254 (380)
Q Consensus 227 r~~~~~~~~~~~~iG~~i~~~i~~~i~~ 254 (380)
|+...++......++=.+||.+.|++..
T Consensus 386 rG~~~Gi~~Sl~alaRaiGPlv~g~i~~ 413 (451)
T KOG2615|consen 386 RGTLNGIFRSLGALARAIGPLVSGVIFS 413 (451)
T ss_pred chHHHHHHHHHHHHHHHhhhhhhheeEE
Confidence 9999999999999999999999987754
No 250
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=96.93 E-value=0.014 Score=58.96 Aligned_cols=128 Identities=11% Similarity=0.054 Sum_probs=104.3
Q ss_pred hHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCccc
Q 016902 91 NMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCD 170 (380)
Q Consensus 91 ~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~~~~~c~ 170 (380)
.+..|+...++++..+.+...+.......++.++..++--+.+|-++++.+|++...++....+++
T Consensus 263 ~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~-------------- 328 (463)
T KOG2816|consen 263 VLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFA-------------- 328 (463)
T ss_pred EEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHh--------------
Confidence 456788889999999999999999999999998888544444599999999999999998888885
Q ss_pred ccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 016902 171 RISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVV 250 (380)
Q Consensus 171 ~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~~ 250 (380)
++.++++.+..+.++. +...+...++.+-+.+.++ ++..+++......+.+++++.+-+
T Consensus 329 --------------~~~w~~~~~~v~~~~~-~~~~pa~~s~~s~~v~~~e------~g~v~~~is~i~~l~~~~~~~~~~ 387 (463)
T KOG2816|consen 329 --------------TETWMMFAAGVVVALA-GIVFPAIRAFASILVSPEE------QGKVFGIISGIEGLSGVVSPALYG 387 (463)
T ss_pred --------------ccchhhhHHHHHHHhh-cchhHHHHhHHHhhccccc------ccchhhHHHHHHHHhhhhhHHHHH
Confidence 3455667666555444 6777888899999998877 999999999999999988888877
Q ss_pred Hhh
Q 016902 251 YIQ 253 (380)
Q Consensus 251 ~i~ 253 (380)
.+.
T Consensus 388 ~i~ 390 (463)
T KOG2816|consen 388 NIF 390 (463)
T ss_pred HHH
Confidence 653
No 251
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=96.68 E-value=0.00043 Score=71.20 Aligned_cols=181 Identities=10% Similarity=0.071 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHhh-cchhHHHHHHHHHHH
Q 016902 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFL-GISQASSVLGGFLADAY-LGRYWTIAIFTTIYL 147 (380)
Q Consensus 70 ~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~-~~~~~~~l~~g~lsD~~-~GR~~~i~i~~~l~~ 147 (380)
...+..+...++.+...|+.++++-|++.+|+++...++.+..... .+..+|.++||++..|+ ++.|..+.+..++.+
T Consensus 306 ~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~ 385 (539)
T PF03137_consen 306 VFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSI 385 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHH
Confidence 4566666777888888899999999999999999999988876654 47788999999999987 444555555544444
Q ss_pred HHHHHHHhhhh-----------cccCC-----CC----CCccccc------ccccCCCCCCcchhHHHHHHHHHHHHHhc
Q 016902 148 AGLTGITLCAT-----------MKVFM-----PN----QDNCDRI------SQLLGSCEPAKSWQMLYLYTVLYITGFGA 201 (380)
Q Consensus 148 lg~~~l~l~~~-----------~~~l~-----~~----~~~c~~~------~~~~~~c~~~~~~~~~~l~~~l~l~g~g~ 201 (380)
+..++...... ..... .. ...|+.. +.....|...-..+...+++.+++..+..
T Consensus 386 v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~ 465 (539)
T PF03137_consen 386 VSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFT 465 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHH
Confidence 44333111000 00000 00 0012110 00012344331233444555554444444
Q ss_pred cchhhhhhhHhhccCCCCCchhhhhhhhHHHH-HHHHHHHHHHHHHHHHHHhhhcc
Q 016902 202 AGIRPCVSSFGADQFDERSKDYKTHLDRFFNF-FYLSVTVGAIVAFTLVVYIQMEH 256 (380)
Q Consensus 202 g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~-~~~~~~iG~~i~~~i~~~i~~~~ 256 (380)
+..........-...++++ |+-+.++ +.+...+|..-||++.|++.|..
T Consensus 466 ~~~~~p~~~i~LR~V~~~~------rs~AlGv~~~~~rllg~IPgPIifG~iiD~t 515 (539)
T PF03137_consen 466 FMSQVPSTLITLRCVPPEQ------RSFALGVQWLIIRLLGFIPGPIIFGAIIDST 515 (539)
T ss_dssp --------------------------------------------------------
T ss_pred HhcccchheeeeccCChhh------cchhhhHHHHHHHhhcCcchHHHHhHHHhhh
Confidence 4444444444446677666 8888888 55566778888999999988753
No 252
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.56 E-value=0.11 Score=54.77 Aligned_cols=76 Identities=11% Similarity=0.098 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHhh-cchhHHHHHHHHH
Q 016902 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNN-FLGISQASSVLGGFLADAY-LGRYWTIAIFTTI 145 (380)
Q Consensus 70 ~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~-~~~~~~~~~l~~g~lsD~~-~GR~~~i~i~~~l 145 (380)
...+.++...++.+.+.|+.++++-||.++|+.+...+..+... ...+..+|.++||++.-++ +.-|.+..+..+.
T Consensus 393 if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~ 470 (735)
T KOG3626|consen 393 IFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVC 470 (735)
T ss_pred hHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHH
Confidence 35677778889999999999999999999999999999887744 5567788889999999887 3444444444333
No 253
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=96.43 E-value=0.051 Score=41.33 Aligned_cols=65 Identities=8% Similarity=-0.073 Sum_probs=56.6
Q ss_pred hHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhh
Q 016902 91 NMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLC 156 (380)
Q Consensus 91 ~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~ 156 (380)
.+.+.++++.+++..+++++.+.-.+++.+|.+...++.++. .+++.+..+.++..+.++.+++.
T Consensus 13 plLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~-~~~~~~~~~l~~~~~~~~~ma~~ 77 (85)
T PF06779_consen 13 PLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHS-RPRRLLRAGLLLTVLSTAAMALT 77 (85)
T ss_pred hHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHHHHHH
Confidence 456678899999999999999999999999999999999985 77888888888888888777764
No 254
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=96.31 E-value=0.0024 Score=58.95 Aligned_cols=156 Identities=17% Similarity=0.118 Sum_probs=87.6
Q ss_pred HhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCcc
Q 016902 90 VNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNC 169 (380)
Q Consensus 90 ~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~~~~~c 169 (380)
...+.|+.+.+++...+.+.+.-.-.+...+...+.|-|+|+. |||+.....++.|+ +..+.-+
T Consensus 57 gPYvYyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkq-GRKracvtycitYi----LsCiTKh----------- 120 (454)
T KOG4332|consen 57 GPYVYYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQ-GRKRACVTYCITYI----LSCITKH----------- 120 (454)
T ss_pred CceeeeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhh-ccccceeeehHHHH----HHHHhhc-----------
Confidence 3445677888898888877666555666666777889999997 99997665555444 3333311
Q ss_pred cccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhh-HhhccCCCCCchhhhhhhhHHHH-HHHHHHHHHHHHHH
Q 016902 170 DRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSS-FGADQFDERSKDYKTHLDRFFNF-FYLSVTVGAIVAFT 247 (380)
Q Consensus 170 ~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~-~~ad~f~~~~~~~~~~r~~~~~~-~~~~~~iG~~i~~~ 247 (380)
++++-.+.+||++-|+..+......-+ +++|.-+.++-+. .=...-|+= .+++..+-+.++.+
T Consensus 121 --------------SpqYkVLmVGR~LGGiaTsLLFSaFEsWliaEHnekr~Feq-qWls~TFskA~ffgNglvAiiaGl 185 (454)
T KOG4332|consen 121 --------------SPQYKVLMVGRVLGGIATSLLFSAFESWLIAEHNEKRGFEQ-QWLSVTFSKAVFFGNGLVAIIAGL 185 (454)
T ss_pred --------------CCceEEEeehhhhhhHHHHHHHHHHHHHHHHHhhhccCChH-hhhhHHHHHHHHhhccHHHHHHHH
Confidence 145667889999988888766544333 3444433222110 001111111 22333333444545
Q ss_pred HHHHhhhcch--hhHHHHHHHHHHHHHHHHH
Q 016902 248 LVVYIQMEHG--WGSAFGALAIAMGISNMLF 276 (380)
Q Consensus 248 i~~~i~~~~g--w~~~f~i~~~~~~~~~i~~ 276 (380)
.+-++.+.++ --.+|-..+.+..++..+.
T Consensus 186 fgn~lvd~~slGPVAPFdAAacfLaigmAvi 216 (454)
T KOG4332|consen 186 FGNLLVDTFSLGPVAPFDAAACFLAIGMAVI 216 (454)
T ss_pred HHHHHHHHhccCCCCchHHHHHHHHHHHHHH
Confidence 5555666554 3345654444444444443
No 255
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.24 E-value=0.33 Score=48.57 Aligned_cols=136 Identities=10% Similarity=-0.086 Sum_probs=98.1
Q ss_pred HHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCCCC
Q 016902 87 GLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQ 166 (380)
Q Consensus 87 ~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~~~ 166 (380)
+....++.|+..+ |++....+..=+.-.+....+..+..++..|+ |--|+=+++.....+.+.+...+...+..
T Consensus 276 sf~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~ri-Glvr~G~~~l~~q~~~L~~~v~~~~~~~~---- 349 (432)
T PF06963_consen 276 SFGGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRI-GLVRAGLWSLWWQWVCLALCVVSFWAPGS---- 349 (432)
T ss_pred cCcHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchhhHHHHHHHHHHHHHHHHHHHhcCCC----
Confidence 3445578899877 99999988888888888888999999999997 99998888877766655555544322210
Q ss_pred CcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHH
Q 016902 167 DNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAF 246 (380)
Q Consensus 167 ~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~ 246 (380)
+.+..+...++.+..+.=+|.=++.-+...++-|..|+++ |+.+.+.-+-..++.-++..
T Consensus 350 --------------~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~------Rg~v~gvq~sl~~lf~ll~~ 409 (432)
T PF06963_consen 350 --------------PFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESE------RGAVSGVQNSLQSLFELLSF 409 (432)
T ss_pred --------------CchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHH------hhHHHHHHHHHHHHHHHHHH
Confidence 0011345566666667667777778888888888888776 99999886666666666654
Q ss_pred HH
Q 016902 247 TL 248 (380)
Q Consensus 247 ~i 248 (380)
.+
T Consensus 410 ~~ 411 (432)
T PF06963_consen 410 VL 411 (432)
T ss_pred HH
Confidence 44
No 256
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.16 E-value=0.68 Score=46.57 Aligned_cols=113 Identities=19% Similarity=0.110 Sum_probs=68.4
Q ss_pred HHHHHHHHHHHHHHHHhh--cchhHHHHHHHHHHHHHHHHHHhhhhccc-CCCCCCcccccccccCCCCCCcchhHHHHH
Q 016902 115 LGISQASSVLGGFLADAY--LGRYWTIAIFTTIYLAGLTGITLCATMKV-FMPNQDNCDRISQLLGSCEPAKSWQMLYLY 191 (380)
Q Consensus 115 ~~~~~~~~l~~g~lsD~~--~GR~~~i~i~~~l~~lg~~~l~l~~~~~~-l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~ 191 (380)
..+..++.++.+.+++|. +||++++.++..++.++.++.-++..... +.|+ + .-....+.+.....
T Consensus 289 g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t----------~-~~~~~~~~~~~~~~ 357 (461)
T KOG3098|consen 289 GLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPT----------D-SPPLLFTPSYYLAL 357 (461)
T ss_pred hHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCC----------c-ccccccccchhHHH
Confidence 344455566677777654 59999999999999988877766421111 1111 0 00001112233344
Q ss_pred HHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHH
Q 016902 192 TVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVA 245 (380)
Q Consensus 192 ~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~ 245 (380)
+.-++.|++-+........++++.+|+ + |..+|+++-+--.+++.++
T Consensus 358 ii~~l~G~~D~~~~t~~~~ii~~~~~~-~------~~~~fsi~kfyq~~~s~v~ 404 (461)
T KOG3098|consen 358 IIGFLLGFGDACFNTQRYVIIALLYPD-D------RAQAFSLFKFYQSVASCVA 404 (461)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHhcC-c------hHHHHHHHHHHHHHHHHHH
Confidence 444678899999999999999999954 3 5666666555444544443
No 257
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.15 E-value=0.075 Score=53.34 Aligned_cols=89 Identities=18% Similarity=0.212 Sum_probs=67.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHH
Q 016902 111 VNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYL 190 (380)
Q Consensus 111 ~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l 190 (380)
..+......+..++++.+-|.. |.|+.+.++...+....+.+.. .|...+
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i-~~K~~lv~ga~~y~~f~~gfl~-----------------------------~N~y~~ 105 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFL-GPKWALVIGATCYAAFPLGFLF-----------------------------PNSYYL 105 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHh-hHHHHHHHHhHHHHHHHHHHHh-----------------------------cchHHH
Confidence 4555666677788899999987 9999999999999887766554 356678
Q ss_pred HHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHH
Q 016902 191 YTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNF 233 (380)
Q Consensus 191 ~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~ 233 (380)
+++-.+.|+|.+....-...+..+-..++. ..|.....|
T Consensus 106 yfssallG~Gaallw~GqG~ylt~~st~~t----ie~Nisi~W 144 (461)
T KOG3098|consen 106 YFSSALLGFGAALLWTGQGGYLTSNSTRET----IERNISIFW 144 (461)
T ss_pred HHHHHHhhhhHHheecccceehhhcCChhh----HHHHHHHHH
Confidence 888889999999888877788877776655 224444444
No 258
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=95.92 E-value=0.035 Score=55.17 Aligned_cols=139 Identities=8% Similarity=-0.012 Sum_probs=74.9
Q ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---chhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCcccc
Q 016902 95 FMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYL---GRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDR 171 (380)
Q Consensus 95 yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~---GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~~~~~c~~ 171 (380)
|...-.|.+..+......+..++..+|.++||.++|++- -|-.+.....+...+|..+.+..-.+ .+. .+
T Consensus 273 ~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~---~~~--~~-- 345 (493)
T KOG1330|consen 273 YSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFL---FPA--FT-- 345 (493)
T ss_pred HHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHH---HHh--hh--
Confidence 333444556666677778888999999999999999841 11123333333332222211110000 000 01
Q ss_pred cccccCCCCCCcchhHHHHHHHHHHHHHhc-cchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHH-HHHHHHHHHHHHH
Q 016902 172 ISQLLGSCEPAKSWQMLYLYTVLYITGFGA-AGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYL-SVTVGAIVAFTLV 249 (380)
Q Consensus 172 ~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~-g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~-~~~iG~~i~~~i~ 249 (380)
.....+.+.++++|+-. -...+......++..|++. |.+++++-.. .-.+|..-+|.+.
T Consensus 346 -------------~~s~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~------Rt~a~a~~~~~~h~fgd~~~p~iv 406 (493)
T KOG1330|consen 346 -------------SSSMIFGLILFLVGETISWFNWATNNPIFLEVVPPSR------RTTAYALDTVFEHIFGDAASPYIV 406 (493)
T ss_pred -------------hHHHHHHHHHHHHHHHHHhcccccccceeeEecCccc------ccHHHHHHHHHHHHhccCCCccee
Confidence 11122222333333222 2223445556678888887 9999999544 4455666667688
Q ss_pred HHhhhcc-hhh
Q 016902 250 VYIQMEH-GWG 259 (380)
Q Consensus 250 ~~i~~~~-gw~ 259 (380)
|.++++. ||+
T Consensus 407 Gilsd~l~g~~ 417 (493)
T KOG1330|consen 407 GILSDKLRGYK 417 (493)
T ss_pred hhHHHHhhCCC
Confidence 8888765 566
No 259
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=95.87 E-value=1.8 Score=43.40 Aligned_cols=202 Identities=9% Similarity=-0.102 Sum_probs=97.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHH
Q 016902 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (380)
Q Consensus 71 ~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~ 150 (380)
.+.+....++.+..-=......+.|+..-+.-+.--.+..-..-.+...+..+..|...|+. -|.+++..+.++--+..
T Consensus 4 ~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~-~Rl~~~~~~l~~Qn~sv 82 (432)
T PF06963_consen 4 LWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRS-PRLKVIRTSLVVQNLSV 82 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCC-cchhhHHHHHHHHHHHH
Confidence 34455555555555444444456677766554544444444444455555566678889997 89998877765533322
Q ss_pred HHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhH
Q 016902 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (380)
Q Consensus 151 ~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~ 230 (380)
++.......- +..+ .. ... ........+.+...+.++..=+..++..+.--|....-..+++..+...
T Consensus 83 ~~s~~~~~~l-~~~~---~~-------~~~-~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~ 150 (432)
T PF06963_consen 83 AASCALFLLL-LSYP---SS-------SSQ-SSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARM 150 (432)
T ss_pred HHHHHHHHHH-HhCC---cc-------ccc-cchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHH
Confidence 2211110000 0000 00 000 0001122222222222222222222223333333221111111224444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHH-HHhhcccccc
Q 016902 231 FNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNML-FFIGTPLYRH 285 (380)
Q Consensus 231 ~~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~-~~~~~~~~~~ 285 (380)
-++..=.=.+.-+++|++.|.+....+...+.++.++..++++.+ +++..+-|+.
T Consensus 151 NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~ 206 (432)
T PF06963_consen 151 NATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFLLARVYNS 206 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 444444445567889999999988788888888777777777766 3444445544
No 260
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=95.68 E-value=0.25 Score=48.14 Aligned_cols=159 Identities=14% Similarity=0.123 Sum_probs=92.1
Q ss_pred cCCChHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hhcchhHH
Q 016902 64 KTGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLAD-----AYLGRYWT 138 (380)
Q Consensus 64 ~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD-----~~~GR~~~ 138 (380)
.++..+.+.++++..+++.+-. |... .++++-+.-|.|-+..+.....+ --+-.-++++++.| ++ ||||.
T Consensus 26 ~~~d~~~illLl~LYllQGiP~-GL~~-~iP~lL~ak~vSyt~~a~fS~ay--~P~sLKllWaPiVDs~y~k~~-Grrks 100 (510)
T KOG3574|consen 26 LKGDRSSILLLLFLYLLQGIPL-GLIG-AIPLLLQAKGVSYTSQAIFSFAY--WPFSLKLLWAPIVDSVYSKRF-GRRKS 100 (510)
T ss_pred hhhhhhhHHHHHHHHHHcCCch-hHhh-hhHHHhcCCCcchhhhhhhhhhh--hHHHHHHHHHhhhHHHHHHhh-ccccc
Confidence 3455667888888888887665 5666 44555556677766554333222 12234578889999 76 99987
Q ss_pred HHHHHHHHHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCCC
Q 016902 139 IAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDE 218 (380)
Q Consensus 139 i~i~~~l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~ 218 (380)
-++=+ -+.+|.+++.++..++..... .....+...+...+++.-++.+.-..++-+..-.+..+
T Consensus 101 Wvvp~-q~llG~~mllLs~~v~~~~g~---------------ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~ 164 (510)
T KOG3574|consen 101 WVVPC-QYLLGLFMLLLSYLVDRGLGG---------------NGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSR 164 (510)
T ss_pred eeeeh-HHHHHHHHHHHhhCCCccccc---------------CCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCH
Confidence 65543 356677777776443332221 00112222333333445555555455555555566665
Q ss_pred CCchhhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 016902 219 RSKDYKTHLDRFFNFFYLSVTVGAIVAFTLV 249 (380)
Q Consensus 219 ~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~ 249 (380)
++ .+-+-.....+.++|.+++.++.
T Consensus 165 e~------lgyaST~q~Vg~~~GyfL~~~if 189 (510)
T KOG3574|consen 165 EN------LGYASTCQSVGQTAGYFLGNVVF 189 (510)
T ss_pred hh------cCchhHHHHHHHhhhHHhhccee
Confidence 55 66666666777778877776554
No 261
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=95.40 E-value=0.014 Score=58.96 Aligned_cols=64 Identities=16% Similarity=0.101 Sum_probs=51.1
Q ss_pred HHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHH
Q 016902 87 GLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTG 152 (380)
Q Consensus 87 ~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~ 152 (380)
.+...+.+|+ +++|+++.+.+.+..+--++.+++++++|++|||| -++|.+++++++..+...+
T Consensus 29 ~l~pll~vy~-kQLGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~-r~~r~lllgsl~~~v~a~f 92 (618)
T KOG3762|consen 29 SLFPLLAVYF-KQLGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRY-RKRRPLLLGSLLLSVTATF 92 (618)
T ss_pred ccchHHHHHH-HHcCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHH-HhcCchhHHHHHHHHHHHH
Confidence 4556667776 58999999999999999999999999999999999 7666666666655544433
No 262
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=95.39 E-value=0.53 Score=47.40 Aligned_cols=85 Identities=15% Similarity=0.196 Sum_probs=60.5
Q ss_pred hhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHHHH------hhhcchh
Q 016902 185 WQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVY------IQMEHGW 258 (380)
Q Consensus 185 ~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~~~------i~~~~gw 258 (380)
.+..+++.+.+++++|.=.+.|...++.+..-|+.- .+..++.|.++...|..++..+.+. ..+....
T Consensus 392 ~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~------~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~~~ 465 (498)
T COG3104 392 VSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPAL------KSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAFIE 465 (498)
T ss_pred cCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHH------HHHHHHHHHHHHHHHHHhhceecccccccchhhhhhhh
Confidence 457788888999999999999999999999988766 7888888999888888877666552 1222334
Q ss_pred hHHHHHHHHHHHHHHHH
Q 016902 259 GSAFGALAIAMGISNML 275 (380)
Q Consensus 259 ~~~f~i~~~~~~~~~i~ 275 (380)
...|+.......+..+.
T Consensus 466 ~~~F~~~g~v~i~~~~~ 482 (498)
T COG3104 466 GRVFGTIGVVAIVIGIL 482 (498)
T ss_pred hhhHHHHHHHHHHHHHH
Confidence 55566555444433333
No 263
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=94.96 E-value=0.083 Score=53.26 Aligned_cols=198 Identities=12% Similarity=0.098 Sum_probs=114.4
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHH--HHHHHHHHHHhhcch---hHHHH
Q 016902 66 GGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQA--SSVLGGFLADAYLGR---YWTIA 140 (380)
Q Consensus 66 ~~~~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~--~~l~~g~lsD~~~GR---~~~i~ 140 (380)
-.|+..+..+...+...+.+..+-+-...+....++++..++....++......+ ..+...+..-+. |+ ++.++
T Consensus 259 ~d~~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~~~gi~~~~~g~ls~~~~l~~~f~~l-~~i~~r~~~~ 337 (488)
T KOG2325|consen 259 LDWVAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVLYNGITLSISGILSVILLLLYIFTRL-GKIDKRRIIL 337 (488)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHHhhhhHHHHHHHHHHHHHHHHHHHHh-hhhccceeee
Confidence 4466777777777887788776666666777778888877765544443332222 223333333333 43 44444
Q ss_pred HHHHHHHHHHHHHHh-hhhcc-cCCCCC---CcccccccccCCCCCCcchhHHHHHHHH-HHHHHhccchhhhhhhHhhc
Q 016902 141 IFTTIYLAGLTGITL-CATMK-VFMPNQ---DNCDRISQLLGSCEPAKSWQMLYLYTVL-YITGFGAAGIRPCVSSFGAD 214 (380)
Q Consensus 141 i~~~l~~lg~~~l~l-~~~~~-~l~~~~---~~c~~~~~~~~~c~~~~~~~~~~l~~~l-~l~g~g~g~~~~~~~~~~ad 214 (380)
.++++..+...+... -...+ .+.+.. ..|... +.+-|......+...++++. ++.|++.-.+.....++.++
T Consensus 338 ~g~l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~~~~--~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~~~tlySk 415 (488)
T KOG2325|consen 338 LGFLIFFLSYYIFTYPWGFYSGPVQPYNTTYAGCDFE--EYSWCDTTTAVPLILYLISFIVVFGIAFPFISTALDTLYSK 415 (488)
T ss_pred ehHHHHHHhhheeeeeccccccccccccccccCcCcc--cchhhccCcccChhhheeehhheeccccccccchHHHHHHH
Confidence 443332222222111 00000 011110 012100 01237666666666666665 44666666666778888899
Q ss_pred cCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHH
Q 016902 215 QFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGIS 272 (380)
Q Consensus 215 ~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~ 272 (380)
+..+++ .+..-+++.+...++..++|++...+....|.++...+..+..++.
T Consensus 416 iLgp~~------q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g~~~v~~~~~~~~l~~ 467 (488)
T KOG2325|consen 416 ILGPRD------QGTMQGVFSISGSIARVVGPIFSTAIFTLSGPRPVWIILLCLLLVV 467 (488)
T ss_pred HhCCcc------ccceeEEEEeccchhhhhhHHHHhhhHHhcCccHHHHHHHHHHHHH
Confidence 999888 7787788888888999999998888877778776665544444333
No 264
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=93.73 E-value=4.2 Score=39.08 Aligned_cols=119 Identities=16% Similarity=0.066 Sum_probs=63.1
Q ss_pred cccCCChHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHH
Q 016902 62 LSKTGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAI 141 (380)
Q Consensus 62 ~~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i 141 (380)
+.+++..|.++.+....++...++. -..|+.+.+..++|.. ..+++- .......++.+.+..+ +|-|+++.+
T Consensus 22 r~~~~~~knv~i~s~~fl~~f~a~~-gl~nlq~~vn~~lg~~--sl~~~y----~~l~~s~m~~~~~Ir~-~g~K~tm~l 93 (390)
T KOG3097|consen 22 RKRLGILKNVLILSIAFLLTFTAYL-GLQNLQTSVNYDLGTV--SLGALY----LSLIDSSMFMPLLIRF-LGTKWTMVL 93 (390)
T ss_pred ccccchhhhhhHHHHHHHHHHHHHH-HHHHHHHHHhcCcccc--hhhhhh----HHHHHHHHHHHHHHHH-HhhHHHHHH
Confidence 3445555666666555554444443 3445666555444332 111111 1122233444455554 599999998
Q ss_pred HHHHHHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHHHHhccchhhhhhhHhhccCC
Q 016902 142 FTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFD 217 (380)
Q Consensus 142 ~~~l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~ 217 (380)
+...|.+....- +. ..+..++.+-.+.|+|.+...+.-.+|++..-+
T Consensus 94 av~~Y~lyiA~N--------l~---------------------pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~ 140 (390)
T KOG3097|consen 94 AVFPYALYIAAN--------LE---------------------PRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQ 140 (390)
T ss_pred HHHHHHHHHHhh--------cc---------------------hhHHhhccHHHhhccccccccccCcceecHHHH
Confidence 887776432211 11 234445556667788887777666666655443
No 265
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=93.70 E-value=0.61 Score=46.07 Aligned_cols=63 Identities=8% Similarity=0.074 Sum_probs=49.1
Q ss_pred hHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhh
Q 016902 186 QMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQM 254 (380)
Q Consensus 186 ~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~ 254 (380)
+.+.+++..+..|+..|+.+.+....+.|..++++ |.-.++...++-.+|..++..++-++..
T Consensus 334 si~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~------REFslg~vsvsds~GI~lAgll~l~le~ 396 (402)
T PF02487_consen 334 SIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPED------REFSLGAVSVSDSLGILLAGLLGLPLEP 396 (402)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHH------HHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 35555566677899989999999999999887666 8888888888888888887777666543
No 266
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=91.34 E-value=2.5 Score=39.60 Aligned_cols=80 Identities=10% Similarity=0.119 Sum_probs=53.6
Q ss_pred HHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHH
Q 016902 190 LYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAM 269 (380)
Q Consensus 190 l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~ 269 (380)
-+++..++-...|...|.+.-+-....|++. |+..+||+..-.++-.-++....---....+-+..|.++.+.+
T Consensus 347 s~i~F~~~E~cvGlfwPSimkmRsqyIPEea------rstimNfFRvPLnifvClvLynlh~~~~p~~tr~mf~icS~~~ 420 (454)
T KOG4332|consen 347 SLIGFCLFEACVGLFWPSIMKMRSQYIPEEA------RSTIMNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFGICSAFL 420 (454)
T ss_pred HHHHHHHHHHHHhhcchHHHHHHHhhCCHHH------HhhhhhheechhhHhhhhhheecccccCccccchhhhhhHHHH
Confidence 3566666667778888888887777788776 9999999988877754443211000001234578899998888
Q ss_pred HHHHHH
Q 016902 270 GISNML 275 (380)
Q Consensus 270 ~~~~i~ 275 (380)
.++.+.
T Consensus 421 ~~a~i~ 426 (454)
T KOG4332|consen 421 FVASIL 426 (454)
T ss_pred HHHHHH
Confidence 777554
No 267
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=91.16 E-value=19 Score=36.57 Aligned_cols=70 Identities=16% Similarity=0.110 Sum_probs=50.0
Q ss_pred HHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHH
Q 016902 197 TGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGI 271 (380)
Q Consensus 197 ~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~ 271 (380)
.++............+.+++|++. ++..+++-+....++..++...+.+.+....||..+..+.-+++++
T Consensus 276 y~~~~nlve~~~k~~v~~~~p~~~-----~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~~~a~i~Pii~li 345 (472)
T TIGR00769 276 YGISINLVEVTWKSKLKAQYPSPN-----EYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWLTAALITPLVMLL 345 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 444445556666777888887543 2899999988888887766666668899999999887654444444
No 268
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=90.92 E-value=12 Score=38.13 Aligned_cols=125 Identities=14% Similarity=0.210 Sum_probs=69.3
Q ss_pred HHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhc--ccCCCCCCcccccccccCCCCCCcchhHH------
Q 016902 117 ISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATM--KVFMPNQDNCDRISQLLGSCEPAKSWQML------ 188 (380)
Q Consensus 117 ~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~--~~l~~~~~~c~~~~~~~~~c~~~~~~~~~------ 188 (380)
++.+..++-.++++++ +|.+.+.+....++....+.++.-.. ..++|+ ..+... .... +......
T Consensus 71 ~a~~f~~~y~kl~n~~-s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~-~~~~~~----~~~~-~~~~~~~i~~~~~ 143 (491)
T PF03219_consen 71 VAILFTILYSKLSNRL-SREKLFYIIIIPFLGFFALFAFVLYPNRDILHPD-AFADKL----LAIL-PPGFKGFIAMFRN 143 (491)
T ss_pred HHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCC-HHHHHh----hhhc-cchHHHHHHHHHH
Confidence 3444566778999997 99998887776666655555543220 112222 011100 0000 0000000
Q ss_pred HHHHHHHHHHHhcc-chhh-hhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhh
Q 016902 189 YLYTVLYITGFGAA-GIRP-CVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQM 254 (380)
Q Consensus 189 ~l~~~l~l~g~g~g-~~~~-~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~ 254 (380)
+.+...++.+=-.| ...+ .-.++..|.+..++ -.+++.++..+.|+|..++..+..++.+
T Consensus 144 Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~e------AKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 144 WTFSLFYVMAELWGSVVLSLLFWGFANEITTVEE------AKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00111122211112 2122 34788888888766 7889999999999999999888888766
No 269
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=90.75 E-value=21 Score=36.28 Aligned_cols=168 Identities=11% Similarity=0.030 Sum_probs=92.5
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCC---HHHHHHHHHHHHH-HHHHHHHHHHHHHHhhcchhHHHHHH
Q 016902 67 GWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKS---FADSSNAVNNFLG-ISQASSVLGGFLADAYLGRYWTIAIF 142 (380)
Q Consensus 67 ~~~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s---~~~a~~~~~~~~~-~~~~~~l~~g~lsD~~~GR~~~i~i~ 142 (380)
-|+.+..+.+..+|-.+.++.+- -+.+.+.++ +.....+=+.... .+.+..++-+++.+++ -|.+++.+.
T Consensus 25 E~~kflpl~Ll~f~I~~ny~~lR-----~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~l-t~~~vF~~~ 98 (509)
T COG3202 25 ELKKFLPLALLFFCILFNYNLLR-----SLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNIL-TREKVFYII 98 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-----HhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhc-CHHHHHHHH
Confidence 46667777777666655554222 233333333 3334444444444 5667778889999997 888888777
Q ss_pred HHHHHHHHHHHHhhhhcccCCCCCCcccccccccC-----CCCCCcc--hhH----HHHHHHHHHHHHhc-cch-hhhhh
Q 016902 143 TTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLG-----SCEPAKS--WQM----LYLYTVLYITGFGA-AGI-RPCVS 209 (380)
Q Consensus 143 ~~l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~-----~c~~~~~--~~~----~~l~~~l~l~g~g~-g~~-~~~~~ 209 (380)
...+....+++++.-+ |. |+.-|++.. ....|.. ... .+-+...++.+=-. ... .-.-.
T Consensus 99 ~~~F~~fF~LFa~Vi~-----P~---~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw 170 (509)
T COG3202 99 LGFFLGFFALFAFVIY-----PY---KDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFW 170 (509)
T ss_pred HHHHHHHHHHHHHHHh-----cc---ccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHH
Confidence 7666666666665432 10 110011100 0001100 000 01112222222111 111 12345
Q ss_pred hHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhh
Q 016902 210 SFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQM 254 (380)
Q Consensus 210 ~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~ 254 (380)
.+.-|+++.++ -.+++..++...|++..++..+..++..
T Consensus 171 ~faNeitt~~e------akRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 171 QFANEITTIEE------AKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred HHHHHhhhHHH------hhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 67778888766 7899999999999999999888888765
No 270
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=90.10 E-value=9.7 Score=37.72 Aligned_cols=121 Identities=9% Similarity=0.054 Sum_probs=66.0
Q ss_pred HHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHHHHHHHH
Q 016902 118 SQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYIT 197 (380)
Q Consensus 118 ~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~~~l~l~ 197 (380)
..+.-++.-+..++. --..=+.+..++..+|+++.+++ .+..+-++|..+.
T Consensus 72 ~l~~Kl~aP~fi~~v-~y~~Ri~~~~~l~~~g~l~va~~----------------------------~~v~~~l~Gv~la 122 (402)
T PF02487_consen 72 SLLVKLIAPFFIHRV-PYWIRILICVALSAAGMLLVAFS----------------------------PSVWVRLLGVVLA 122 (402)
T ss_pred HHHHHHHhHhhhhhc-cchHHHHHHHHHHHHHHhheeec----------------------------cchhHHHHHHHHH
Confidence 333444555666654 32222334445666777776654 2455566788888
Q ss_pred HHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcch--hhHHHHHHHHHHHHHHHH
Q 016902 198 GFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHG--WGSAFGALAIAMGISNML 275 (380)
Q Consensus 198 g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~~~g--w~~~f~i~~~~~~~~~i~ 275 (380)
+++.|.......++.+ -+++. ..+.|..+...++++|...-..+.. .| -+..+.+...+-++-++.
T Consensus 123 s~ssg~GE~tfL~lt~-~y~~~----------~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~ 190 (402)
T PF02487_consen 123 SLSSGLGEVTFLSLTH-FYGKS----------SLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLS 190 (402)
T ss_pred hhhhhhhHHHHHHHHH-hcCcc----------ccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHH
Confidence 8888887777666644 45421 2344454555556666554433444 44 455666655554444444
Q ss_pred HHhh
Q 016902 276 FFIG 279 (380)
Q Consensus 276 ~~~~ 279 (380)
+++.
T Consensus 191 ~f~~ 194 (402)
T PF02487_consen 191 YFFL 194 (402)
T ss_pred HHHh
Confidence 4443
No 271
>PRK10263 DNA translocase FtsK; Provisional
Probab=89.85 E-value=4.8 Score=45.29 Aligned_cols=34 Identities=15% Similarity=-0.013 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHH
Q 016902 240 VGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISN 273 (380)
Q Consensus 240 iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~ 273 (380)
.|+++|.++..++...+|..-+.++..+++++++
T Consensus 142 gGGIIG~lLs~lL~~LfG~vGa~LILLlllLIGL 175 (1355)
T PRK10263 142 SGGVIGSLLSTTLQPLLHSSGGTIALLCVWAAGL 175 (1355)
T ss_pred ccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 3666666666666665565434444444444333
No 272
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=88.06 E-value=3.8 Score=41.05 Aligned_cols=55 Identities=13% Similarity=0.002 Sum_probs=40.9
Q ss_pred HHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcch
Q 016902 197 TGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHG 257 (380)
Q Consensus 197 ~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~~~g 257 (380)
..+..+...-....+.+++-|+.. -++.+++.....|+|..++..++.++.+..+
T Consensus 328 ~~~~~~i~~mP~lvl~a~lcP~G~------Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~ 382 (433)
T PF03092_consen 328 EEVIGMIAFMPSLVLAARLCPKGS------EGTVYALLASFSNLGSSVSSTLGAFLMELFG 382 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCc------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 333334444555677899999877 7899999988999999998888888765443
No 273
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=85.51 E-value=46 Score=34.02 Aligned_cols=70 Identities=17% Similarity=0.166 Sum_probs=47.4
Q ss_pred HHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHH
Q 016902 197 TGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGI 271 (380)
Q Consensus 197 ~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~ 271 (380)
.++.........-..+.+++|+.. ....+++-+....++-+.+-.++++.+....||..+..+.-+.+++
T Consensus 292 Ygi~inLvE~~wK~~lk~~~~~~~-----~ysafmG~~~~~tGivtii~~~l~~~iir~~GW~~~AlitPiv~li 361 (491)
T PF03219_consen 292 YGISINLVEVVWKSQLKQLYPDPN-----DYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWRTAALITPIVILI 361 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCch-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhHHHHHH
Confidence 444445555666677778888654 2788888877666666666667778888899999887664333333
No 274
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=82.86 E-value=21 Score=27.97 Aligned_cols=45 Identities=18% Similarity=0.080 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHH
Q 016902 107 SSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTG 152 (380)
Q Consensus 107 a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~ 152 (380)
.+........+..+++.+.+.+.|.. |.+..+.+...+.+++.+.
T Consensus 89 ~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 133 (141)
T TIGR00880 89 LGLMSAGIALGPLLGPPLGGVLAQFL-GWRAPFLFLAILALAAFIL 133 (141)
T ss_pred HHHHHHhHHHHHHHhHHhHHHHhccc-chHHHHHHHHHHHHHHHHH
Confidence 34555666788888899999999986 8777776665555544433
No 275
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=82.85 E-value=55 Score=32.85 Aligned_cols=31 Identities=13% Similarity=0.168 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHhccchhhhhhhHhhccCCC
Q 016902 187 MLYLYTVLYITGFGAAGIRPCVSSFGADQFDE 218 (380)
Q Consensus 187 ~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~ 218 (380)
....++..++.|++.+..+....++.+ .||+
T Consensus 106 f~~~~~~v~~~g~~~~~~q~s~~gla~-~fp~ 136 (437)
T TIGR00939 106 FVTTMASVVIINSGMALLQGSLFGLAG-VFPS 136 (437)
T ss_pred HHHHHHHHHHHHhhhhhhcccchhhcc-cCCH
Confidence 444455556778888888877777655 6774
No 276
>KOG4112 consensus Signal peptidase subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=82.37 E-value=3.8 Score=31.32 Aligned_cols=55 Identities=22% Similarity=0.288 Sum_probs=31.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHHhhcccccc
Q 016902 228 DRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRH 285 (380)
Q Consensus 228 ~~~~~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~~~~~~~~~~~ 285 (380)
..+=-++.+...+|+++|. +.|+.++.++|. .++..+..++.+++.+--.|+|++
T Consensus 22 kkaEr~~q~ilti~aiVg~-i~Gf~~Qqls~t--vy~vg~~~v~t~li~LPpwP~y~r 76 (101)
T KOG4112|consen 22 KKAERFQQLILTIGAIVGF-IYGFAQQQLSVT--VYIVGAGFVFTLLITLPPWPWYRR 76 (101)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH--HHHHHHHHHHHHHhcCCCchhhhc
Confidence 3444567888889998884 556666656653 333333333444444444455554
No 277
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=81.85 E-value=25 Score=35.37 Aligned_cols=53 Identities=13% Similarity=0.187 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHH
Q 016902 187 MLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVA 245 (380)
Q Consensus 187 ~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~ 245 (380)
-...++..++.|+..|-.......++.+..+++ | |..+-++..++.++|-.+|
T Consensus 372 d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~---e---~e~aG~~~~~~l~~Gl~~G 424 (437)
T TIGR00939 372 DAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPH---E---REVAGALMVIFLLVGLALG 424 (437)
T ss_pred cHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHH---H---HHHHHHHHHHHHHHHHHHH
Confidence 455566678899999988888888888887743 3 3333333444444444444
No 278
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=81.78 E-value=27 Score=35.67 Aligned_cols=90 Identities=12% Similarity=0.063 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhHHHHH
Q 016902 112 NNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLY 191 (380)
Q Consensus 112 ~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~~~l~ 191 (380)
.+..+.+.+..++.|++-.++ .|.--+.++.+..+.|.+++..+ . +.+.+..|
T Consensus 305 A~~tllga~~a~~ag~~~~~w-~~~~~l~l~v~s~~~~gll~~m~-~-------------------------t~~Iw~~Y 357 (511)
T TIGR00806 305 AASTLLGAITSFIAGFVNIRW-ARWSKLLIAVVSAIQAGLVFWMS-Q-------------------------SHDIWVLY 357 (511)
T ss_pred HHHHHHHHHHHHHHHhhcCCc-hhhHHHHHHHHHHHHHHHhhhhh-c-------------------------ccchHHHH
Confidence 334455566777888886665 55444444444343333333322 1 14688888
Q ss_pred HHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHH
Q 016902 192 TVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFF 234 (380)
Q Consensus 192 ~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~ 234 (380)
++.++.........+....-+|.-...+. -+-.|++.
T Consensus 358 ~~yvlf~~~y~flitia~~~iA~~L~~~~------~aLvFGiN 394 (511)
T TIGR00806 358 VTYVLFRGIYQFLVPIATFQIASSLSKEL------CALVFGIN 394 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccc------eEEEEecH
Confidence 88888888877877887777787777665 56666653
No 279
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=76.47 E-value=84 Score=31.19 Aligned_cols=82 Identities=9% Similarity=0.053 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhh-hc-chhhHHHHHHH
Q 016902 189 YLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQ-ME-HGWGSAFGALA 266 (380)
Q Consensus 189 ~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~~~i~-~~-~gw~~~f~i~~ 266 (380)
..++...+.+++.|..+....+..++ ||.+. .+..+.--.++..+.++.. ++.-.+. +. .+--.=|++..
T Consensus 119 vt~~~vv~~~~a~a~~qgs~~G~a~~-~P~~y------tqavm~G~a~aG~l~Sl~~-i~tka~~~~~~~sA~~yF~~s~ 190 (406)
T KOG1479|consen 119 VTLIIVVLLNLANAVVQGSLYGLAGL-FPSEY------TQAVMSGQALAGTLTSLLR-ILTKAAFSDSRTSALIYFITST 190 (406)
T ss_pred HHHHHHHHHhhhhhhhccchhhhhhc-CCHHH------HHHHHhcchhHhHHHHHHH-HHHHHhcCCCCceeehhHHHHH
Confidence 33444456667766666666665444 56444 3344333333333333222 1222222 21 12222345566
Q ss_pred HHHHHHHHHHHh
Q 016902 267 IAMGISNMLFFI 278 (380)
Q Consensus 267 ~~~~~~~i~~~~ 278 (380)
+..+++++.+..
T Consensus 191 ~~~llC~i~y~~ 202 (406)
T KOG1479|consen 191 VILLLCFVLYLV 202 (406)
T ss_pred HHHHHHHHHHHH
Confidence 666666666553
No 280
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=74.80 E-value=14 Score=29.21 Aligned_cols=31 Identities=19% Similarity=0.037 Sum_probs=21.5
Q ss_pred HHHHHHHHhhcchhHHHHHHHHHHHHHHHHH
Q 016902 123 VLGGFLADAYLGRYWTIAIFTTIYLAGLTGI 153 (380)
Q Consensus 123 l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l 153 (380)
.+.||+-|+|.|-.+.-+|.+++.-.+..++
T Consensus 60 a~iG~llD~~agTsPwglIv~lllGf~AG~l 90 (116)
T COG5336 60 AGIGWLLDKFAGTSPWGLIVFLLLGFGAGVL 90 (116)
T ss_pred HHHHHHHHHhcCCCcHHHHHHHHHHHHHHHH
Confidence 4558999999999887776665544444333
No 281
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=73.25 E-value=1e+02 Score=31.68 Aligned_cols=54 Identities=13% Similarity=0.178 Sum_probs=39.6
Q ss_pred HHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhh
Q 016902 195 YITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQM 254 (380)
Q Consensus 195 ~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~ 254 (380)
++..+..-.....+.+|-+...|+.. -|+++.+.+...|+|+---.+++-++.|
T Consensus 413 ~l~sf~stvmFVai~AFharISDP~I------GGTYMTLLNTvSNLGGtWP~~~vL~lVD 466 (544)
T PF13000_consen 413 VLSSFMSTVMFVAIMAFHARISDPAI------GGTYMTLLNTVSNLGGTWPRTFVLWLVD 466 (544)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCccc------chHHHHHHHHHHhcCCCchHHHHHHHhh
Confidence 34445555566788899999999887 7999999999999987555555444444
No 282
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=73.13 E-value=11 Score=32.06 Aligned_cols=49 Identities=14% Similarity=0.173 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHH
Q 016902 187 MLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIV 244 (380)
Q Consensus 187 ~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i 244 (380)
...+++.+.++|+|.-| ..+.++.--.|++. -|++++|=.+-.|++-+.
T Consensus 97 ~~~~~~S~~~Fg~gllG---isYGilSaSWD~~r------~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 97 WAVLLVSLVFFGLGLLG---ISYGILSASWDPER------EGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred hHHHHHHHHHHHHHHHh---hhhhhcccccCCCC------CCCcccHHHHHHhHHHHH
Confidence 44555555555555443 34566677788776 799999988888886543
No 283
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=72.79 E-value=18 Score=26.86 Aligned_cols=49 Identities=16% Similarity=0.322 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHHhhcccc
Q 016902 232 NFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLY 283 (380)
Q Consensus 232 ~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~~~~~~~~~ 283 (380)
.+++....++++++ .+.||+.++ .+.++++.++..++++++.+--.+.|
T Consensus 11 ~l~~~il~~~~iis-fi~Gy~~q~--~~~~~~~~~~g~~~~~lv~vP~Wp~y 59 (76)
T PF06645_consen 11 KLMQYILIISAIIS-FIVGYITQS--FSYTFYIYGAGVVLTLLVVVPPWPFY 59 (76)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHH--HHHHHHHHHHHHHHHHhheeCCcHhh
Confidence 34555666777776 566777665 35566665555555554443333334
No 284
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=72.71 E-value=8.6 Score=38.61 Aligned_cols=89 Identities=9% Similarity=-0.156 Sum_probs=53.4
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-cCCCH-----H-----------HHHHHHHHHHHHHHHHHHHHHH
Q 016902 65 TGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYV-MHKSF-----A-----------DSSNAVNNFLGISQASSVLGGF 127 (380)
Q Consensus 65 ~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~-~~~s~-----~-----------~a~~~~~~~~~~~~~~~l~~g~ 127 (380)
+...+.++.++...++..++.+...-+.+.++-++ +|=++ + .-.+...+......+.+++.-+
T Consensus 275 ~~mpr~m~~L~i~~lltW~a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~~~Y~~GV~~G~~GL~ins~~lgi~S~~~~~ 354 (498)
T KOG0637|consen 275 KVMPRPMRMLLIVTLLTWIAWFPFLLFDTDFMGREVYGGDPKADENSEAKKLYNAGVRMGCLGLMLNSIVLGIYSLLVEK 354 (498)
T ss_pred hhCChhHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhCCCCCCCcchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHH
Confidence 33455677888888888887776555555554332 22111 1 1135666677777788888899
Q ss_pred HHHhhcchhHHHHHHHHHHHHHHHHHH
Q 016902 128 LADAYLGRYWTIAIFTTIYLAGLTGIT 154 (380)
Q Consensus 128 lsD~~~GR~~~i~i~~~l~~lg~~~l~ 154 (380)
+.+++ |-|+.++.+...+.++..+..
T Consensus 355 l~~~~-g~r~~y~~~~~~f~~~~~~~g 380 (498)
T KOG0637|consen 355 LSRKF-GTRKRYWGGVNAFGLATGLAG 380 (498)
T ss_pred HHHhc-CcceEEeehhHHHHHHHHHHh
Confidence 99997 844444444443444444433
No 285
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=70.77 E-value=14 Score=38.43 Aligned_cols=96 Identities=20% Similarity=0.237 Sum_probs=68.7
Q ss_pred hhHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcc----hhhH
Q 016902 185 WQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEH----GWGS 260 (380)
Q Consensus 185 ~~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~~~----gw~~ 260 (380)
.+..+++--.+++|++-........-|.=+|+|+.. |+...+++.....+|..++..+...+.... +|-.
T Consensus 456 mSi~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sM------kS~~~al~l~t~a~G~~lss~Lv~~v~~~t~~~~~w~~ 529 (571)
T KOG1237|consen 456 MSILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESM------KSVATALWLLTVAVGNYLSSVLVSLVQFSTGKAAEWLG 529 (571)
T ss_pred eeHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccCC
Confidence 566777777888999988888778888889999888 999999999999999999988886554433 2322
Q ss_pred -----------HHHHHHHHHHHHHHHHHhhccccccc
Q 016902 261 -----------AFGALAIAMGISNMLFFIGTPLYRHR 286 (380)
Q Consensus 261 -----------~f~i~~~~~~~~~i~~~~~~~~~~~~ 286 (380)
-||+.++...+-...+....++|+++
T Consensus 530 ~~~ln~~~ld~Fy~lla~~~~~n~~~~~~~~~~y~~~ 566 (571)
T KOG1237|consen 530 FANLNKGRLDYFYWLLAVYSAVNFLYFLICAKRYDYK 566 (571)
T ss_pred hhHhhhhHHHHHHHHHHHHHhhhhhheEEEEEeeeec
Confidence 22444445555555555555666554
No 286
>COG3619 Predicted membrane protein [Function unknown]
Probab=69.72 E-value=88 Score=28.42 Aligned_cols=29 Identities=3% Similarity=-0.183 Sum_probs=15.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcch
Q 016902 106 DSSNAVNNFLGISQASSVLGGFLADAYLGR 135 (380)
Q Consensus 106 ~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR 135 (380)
.-+.......+...++..++..++-+. .|
T Consensus 56 ~~a~~~~~pii~Fv~Gv~~~~~~~r~~-~~ 84 (226)
T COG3619 56 ALAVLLLLPILAFVLGVAAAELISRRA-TR 84 (226)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-cc
Confidence 334444455555666655555555544 54
No 287
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=66.11 E-value=65 Score=31.99 Aligned_cols=56 Identities=9% Similarity=-0.013 Sum_probs=41.3
Q ss_pred HHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcchhh
Q 016902 198 GFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWG 259 (380)
Q Consensus 198 g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~~~gw~ 259 (380)
++..-.......+|.+...|+.. -++.+.+.+...|+|+.--.+++.++.|..+|.
T Consensus 380 ~~~~ts~fv~~maf~aqisdp~i------ggTymTlLNTLsnLGg~wp~tv~l~l~D~ltv~ 435 (510)
T KOG3574|consen 380 QVFVTSMFVSGMAFHAQISDPAI------GGTYMTLLNTLSNLGGNWPGTVALWLADGLTVK 435 (510)
T ss_pred hhHHHHHHHHHHHHHhhcCCccc------CccHHHHHHHHHHhcCCcHHHHHHHhcccCcee
Confidence 33333444567788888888877 899999999999999866667777777765543
No 288
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=65.09 E-value=68 Score=32.86 Aligned_cols=37 Identities=11% Similarity=0.193 Sum_probs=23.9
Q ss_pred hHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHh
Q 016902 210 SFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYI 252 (380)
Q Consensus 210 ~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~~~i 252 (380)
+..-.++.+++ ++-+-.....+.++|.+++.++.-.+
T Consensus 141 GWALT~Ls~~n------~~~ASTcqtvG~~~Gyfls~tvFlal 177 (544)
T PF13000_consen 141 GWALTMLSPEN------VGYASTCQTVGQTAGYFLSFTVFLAL 177 (544)
T ss_pred hhhhhhcChhh------cchHHHHHHhHhhhhHHHHHHHHHhh
Confidence 33344555555 66666667778888888887765444
No 289
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=60.78 E-value=1.4e+02 Score=27.90 Aligned_cols=33 Identities=12% Similarity=-0.128 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHH
Q 016902 108 SNAVNNFLGISQASSVLGGFLADAYLGRYWTIA 140 (380)
Q Consensus 108 ~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~ 140 (380)
....-.|..+..+|+...|+.+-.-+-||+-+.
T Consensus 144 ~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~ 176 (267)
T PF07672_consen 144 PIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIH 176 (267)
T ss_pred HHHHHHHHHHHhhhceeeccchhhhhhhhhHHH
Confidence 344455677777888888888876556666554
No 290
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=58.20 E-value=2.2e+02 Score=29.09 Aligned_cols=76 Identities=17% Similarity=0.165 Sum_probs=50.4
Q ss_pred HHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHH-HHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHH
Q 016902 197 TGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVG-AIVAFTLVVYIQMEHGWGSAFGALAIAMGISNML 275 (380)
Q Consensus 197 ~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG-~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~ 275 (380)
.+++.-...+.--+=+.+++|.... +..+++-++....+- ..+...+++-+....||-++-.++-+.++++.++
T Consensus 294 Y~v~inLvE~~wKs~ik~~~~~~~~-----~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~GW~~~AlitPiv~litg~l 368 (509)
T COG3202 294 YGVSINLVEGVWKSGIKELYPTTNE-----YTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVGWFTGALITPLVMLITGVL 368 (509)
T ss_pred HHHHHHHHHHHHHHhHHHhcCChhH-----HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 4444445555556666777776552 677777766655555 4555666777788889998888777777666555
Q ss_pred HH
Q 016902 276 FF 277 (380)
Q Consensus 276 ~~ 277 (380)
|+
T Consensus 369 FF 370 (509)
T COG3202 369 FF 370 (509)
T ss_pred HH
Confidence 54
No 291
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=57.74 E-value=2.1e+02 Score=28.59 Aligned_cols=86 Identities=13% Similarity=0.010 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcchhH
Q 016902 108 SNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQM 187 (380)
Q Consensus 108 ~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~~~~ 187 (380)
+.+-.+..+.+.++.+..|++..++ .+..-+.++.+-.+.+.+++..+.. .+.
T Consensus 288 G~VeA~~tllgA~~al~~g~v~~~w-~~~~~l~l~~~S~l~a~~L~lm~~t--------------------------~~I 340 (412)
T PF01770_consen 288 GAVEAASTLLGAIAALLAGYVKVNW-DRWGELALGVFSLLQAGLLFLMSFT--------------------------GNI 340 (412)
T ss_pred hHHHHHHHHHHHHHHHHHhHhhcch-HHHHHHHHHHHHHHHHHHHHHHHHh--------------------------hHH
Confidence 4444555666777788888886665 7765555554444434333333211 467
Q ss_pred HHHHHHHHHHHHhccchhhhhhhHhhccCCCCC
Q 016902 188 LYLYTVLYITGFGAAGIRPCVSSFGADQFDERS 220 (380)
Q Consensus 188 ~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~ 220 (380)
+..+++.++.....-...+....=+|....++.
T Consensus 341 wv~Y~~yIif~~~y~fliTiA~~qIA~~l~~e~ 373 (412)
T PF01770_consen 341 WVCYAGYIIFRSLYMFLITIASFQIAKNLSEER 373 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 777777776665555555555555555555444
No 292
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=57.19 E-value=4 Score=38.85 Aligned_cols=35 Identities=6% Similarity=0.197 Sum_probs=3.5
Q ss_pred hHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCC
Q 016902 186 QMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERS 220 (380)
Q Consensus 186 ~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~ 220 (380)
+-+.+++..++.|+..|-.......++.+..++++
T Consensus 247 ~d~~~~i~~~l~g~TNGyl~tl~m~~~p~~v~~~e 281 (309)
T PF01733_consen 247 SDAWFIILMLLFGFTNGYLSTLAMMYAPKSVSPEE 281 (309)
T ss_dssp --------------------HHHH-----------
T ss_pred chHHHHHHHHHHHHccchhhhceeeeCCCcCCHHH
Confidence 34556666778999999888888888888887444
No 293
>PF10777 YlaC: Inner membrane protein YlaC; InterPro: IPR019713 The extracytoplasmic function (ECF) sigma factors are small regulatory proteins that are quite divergent in sequence relative to most other sigma factors. YlaC, regulated by YlaA, is important in oxidative stress resistance. It contributes to hydrogen peroxide resistance in Bacillus subtilis [].
Probab=56.43 E-value=45 Score=27.99 Aligned_cols=44 Identities=25% Similarity=0.392 Sum_probs=26.0
Q ss_pred HHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHHhhcccccccC
Q 016902 244 VAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRL 287 (380)
Q Consensus 244 i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~~~~~~~~~~~~~ 287 (380)
+...+..|-....||.+..+....+.+.+.++++-..|.|+...
T Consensus 47 ~~~~~lm~~spy~G~~s~~~ftv~fv~m~~~llfDI~P~YrfED 90 (155)
T PF10777_consen 47 LAVAALMYYSPYFGLGSVWGFTVFFVVMAAFLLFDIKPRYRFED 90 (155)
T ss_pred HHHHHHHHhcchhhhHHHHHHHHHHHHHHHHHHhhccceeeecc
Confidence 33334444556677665555555555556666666778887654
No 294
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=55.97 E-value=85 Score=31.16 Aligned_cols=35 Identities=6% Similarity=0.158 Sum_probs=26.9
Q ss_pred hHHHHHHHHHHHHHhccchhhhhhhHhhccCCCCC
Q 016902 186 QMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERS 220 (380)
Q Consensus 186 ~~~~l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~ 220 (380)
+.+++++...+.|+..|=...+...+...+.++++
T Consensus 342 ~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e 376 (406)
T KOG1479|consen 342 SDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSE 376 (406)
T ss_pred CchHHHHHHHHHHhccchHhhheehhcCCCCChHH
Confidence 34566667778899998888888888888877544
No 295
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=55.36 E-value=1.5e+02 Score=26.17 Aligned_cols=37 Identities=16% Similarity=0.173 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHH
Q 016902 235 YLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGIS 272 (380)
Q Consensus 235 ~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~ 272 (380)
+....++-.+|..+++++.+..+. +.+++++++.++.
T Consensus 168 ~~~~i~~f~~Ga~~ga~l~~~~~~-~al~~~~~~l~~~ 204 (209)
T PF06912_consen 168 YLLIILSFFIGAILGALLYRRLGF-WALLLPALLLLLL 204 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhh-HHHHHHHHHHHHH
Confidence 333344444455555566665563 4555555544433
No 296
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=51.25 E-value=75 Score=21.55 Aligned_cols=29 Identities=10% Similarity=0.202 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHHHHHhhcchhHHHHHHH
Q 016902 115 LGISQASSVLGGFLADAYLGRYWTIAIFT 143 (380)
Q Consensus 115 ~~~~~~~~l~~g~lsD~~~GR~~~i~i~~ 143 (380)
.....+...+.|+..|+++|..+...+..
T Consensus 10 ~~~~i~~g~~~G~~lD~~~~t~p~~~~~g 38 (55)
T PF09527_consen 10 MAAPILVGFFLGYWLDKWFGTSPWFTLIG 38 (55)
T ss_pred HHHHHHHHHHHHHHHHHHcCCChHHHHHH
Confidence 34444556677899999889865554443
No 297
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=51.07 E-value=2e+02 Score=30.84 Aligned_cols=33 Identities=15% Similarity=0.195 Sum_probs=22.9
Q ss_pred HHHHHHH---hhcchhHHHHHHHHHHHHHHHHHHhh
Q 016902 124 LGGFLAD---AYLGRYWTIAIFTTIYLAGLTGITLC 156 (380)
Q Consensus 124 ~~g~lsD---~~~GR~~~i~i~~~l~~lg~~~l~l~ 156 (380)
+.+-++| ++-||.+-++++.+++.++.+...+.
T Consensus 42 ia~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll 77 (704)
T TIGR01666 42 IAAALVDLDDRLTGRLKNVIFTLICFSIASFSVELL 77 (704)
T ss_pred HhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3355555 56688888888888888777765553
No 298
>PF01528 Herpes_glycop: Herpesvirus glycoprotein M; InterPro: IPR000785 The Equid herpesvirus 1 (Equine herpesvirus 1, EHV-1) protein belongs to a family of sequences that groups together Human herpesvirus 1 (HHV-1) UL10, EHV-1 52, Human herpesvirus 3 (HHV-3) 50, Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4) BBRF3, Human herpesvirus 1 (HHV-1) 39 and Human cytomegalovirus (HHV-5) UL100. Little is yet known about the properties of the protein. However, its amino acid sequence is highly hydrophobic, containing 8 putative membrane-spanning regions, and it is therefore believed to be either membrane-associated or transmembrane.; GO: 0016020 membrane
Probab=49.08 E-value=83 Score=30.87 Aligned_cols=25 Identities=16% Similarity=0.397 Sum_probs=14.9
Q ss_pred hhcchhHHHHHHHHHHHHHHHHHHh
Q 016902 131 AYLGRYWTIAIFTTIYLAGLTGITL 155 (380)
Q Consensus 131 ~~~GR~~~i~i~~~l~~lg~~~l~l 155 (380)
+..|..|++++-.....+|+..+.+
T Consensus 198 ~~v~~~r~V~vNl~~~~l~l~tlv~ 222 (374)
T PF01528_consen 198 RVVGPFRAVVVNLVLSLLGLETLVF 222 (374)
T ss_pred HHHhccHHHHHHHHHHHHHHHHHHH
Confidence 4457777777766665555544443
No 299
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=47.71 E-value=2e+02 Score=25.46 Aligned_cols=31 Identities=16% Similarity=-0.199 Sum_probs=14.9
Q ss_pred hcchhhHHHHHHHHHHHHHHHHHHhhccccc
Q 016902 254 MEHGWGSAFGALAIAMGISNMLFFIGTPLYR 284 (380)
Q Consensus 254 ~~~gw~~~f~i~~~~~~~~~i~~~~~~~~~~ 284 (380)
...+-.+..++..++.+++.++.++.+++|.
T Consensus 172 ~~inp~l~~~~~iiig~i~~~~~~~lkkk~~ 202 (206)
T PF06570_consen 172 PVINPVLPPWVYIIIGVIAFALRFYLKKKYN 202 (206)
T ss_pred ccCCcCCCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 3334344444444555555555555555543
No 300
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=47.10 E-value=2.4e+02 Score=30.27 Aligned_cols=33 Identities=18% Similarity=0.163 Sum_probs=23.5
Q ss_pred HHHHHHH---hhcchhHHHHHHHHHHHHHHHHHHhh
Q 016902 124 LGGFLAD---AYLGRYWTIAIFTTIYLAGLTGITLC 156 (380)
Q Consensus 124 ~~g~lsD---~~~GR~~~i~i~~~l~~lg~~~l~l~ 156 (380)
+.+-++| ++-||.+-++++.+++.++.+...+.
T Consensus 42 ia~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll 77 (701)
T TIGR01667 42 IAAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLL 77 (701)
T ss_pred HhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344555 56688889999988888887776653
No 301
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=42.84 E-value=15 Score=30.13 Aligned_cols=9 Identities=22% Similarity=0.039 Sum_probs=3.7
Q ss_pred hHHHHHHHH
Q 016902 259 GSAFGALAI 267 (380)
Q Consensus 259 ~~~f~i~~~ 267 (380)
||.+++.++
T Consensus 1 RW~l~~iii 9 (130)
T PF12273_consen 1 RWVLFAIII 9 (130)
T ss_pred CeeeHHHHH
Confidence 344443333
No 302
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=42.35 E-value=3.4e+02 Score=26.52 Aligned_cols=51 Identities=14% Similarity=0.086 Sum_probs=30.5
Q ss_pred HHHHhccchhhhhhhHhhccCCCCCchh-hhhhhhHHHHHHHHHHHHHHHHH
Q 016902 196 ITGFGAAGIRPCVSSFGADQFDERSKDY-KTHLDRFFNFFYLSVTVGAIVAF 246 (380)
Q Consensus 196 l~g~g~g~~~~~~~~~~ad~f~~~~~~~-~~~r~~~~~~~~~~~~iG~~i~~ 246 (380)
++|+..+.....+..|+--..|.-+++. .---|..|+-+..+..+|+.+.+
T Consensus 248 ~LG~~qslFE~smy~FVflWtPaL~~~~~~~P~GlIFssFM~a~MlGS~lf~ 299 (354)
T PF05631_consen 248 LLGLIQSLFEGSMYLFVFLWTPALDPDDEELPLGLIFSSFMVAMMLGSSLFS 299 (354)
T ss_pred HHHHHHHHHHHHHHHheeeeeceecCCCCCCCchHHHHHHHHHHHHHHHHHH
Confidence 4566667777777777766666433211 11256667666667777765554
No 303
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=40.65 E-value=1.2e+02 Score=23.83 Aligned_cols=17 Identities=18% Similarity=0.071 Sum_probs=10.6
Q ss_pred HHHHHHHHHHhhcchhH
Q 016902 121 SSVLGGFLADAYLGRYW 137 (380)
Q Consensus 121 ~~l~~g~lsD~~~GR~~ 137 (380)
..++.|..-|+.+|-.+
T Consensus 58 ~G~~lG~WLD~~~~t~~ 74 (100)
T TIGR02230 58 LGVAVGIWLDRHYPSPF 74 (100)
T ss_pred HHHHHHHHHHhhcCCCc
Confidence 34556777777767544
No 304
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=39.38 E-value=40 Score=31.59 Aligned_cols=54 Identities=11% Similarity=-0.151 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH
Q 016902 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSV 123 (380)
Q Consensus 70 ~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l 123 (380)
...-+.+..++.++-...-..+++.|...+++++....++.-.+..+..+..++
T Consensus 202 ~~YQiAllYmLsRL~iNiSQaYlaFfviddlqm~qsakAllP~v~Yl~SF~VS~ 255 (412)
T KOG4830|consen 202 QFYQIALLYMLSRLYINISQAYLAFFVIDDLQMEQSAKALLPMVAYLSSFSVSM 255 (412)
T ss_pred HHHHHHHHHHHHHHHhhhhhhheeeEEeehhhHHHHHhhhhHHHHHHhhhhHHh
Confidence 455666677777776666667777788888888776666655554444444443
No 305
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=38.92 E-value=39 Score=31.66 Aligned_cols=122 Identities=15% Similarity=0.107 Sum_probs=69.3
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHH---------Hhhcchh
Q 016902 66 GGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLA---------DAYLGRY 136 (380)
Q Consensus 66 ~~~~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~ls---------D~~~GR~ 136 (380)
++|+.+.+.. ..+..-++.....+++..|+++ .|.++...+....+-+.+-++..++.|..+ ||+ |||
T Consensus 15 gr~svf~yGv-GHmlNDitAScWFTYlllfltq-iglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~-G~~ 91 (412)
T KOG4830|consen 15 GRTSVFAYGV-GHMLNDITASCWFTYLLLFLTQ-IGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRI-GRR 91 (412)
T ss_pred cceeeeeech-hHHHhhHHHHHHHHHHHHHHHH-hcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhh-cce
Confidence 3444333333 3344444444566788888875 578887777888888888888888887554 576 988
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcccCCCCCCcccccccccCCCCCCcc--hhHHHHHHHHHHHHHhccchhh
Q 016902 137 WTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKS--WQMLYLYTVLYITGFGAAGIRP 206 (380)
Q Consensus 137 ~~i~i~~~l~~lg~~~l~l~~~~~~l~~~~~~c~~~~~~~~~c~~~~~--~~~~~l~~~l~l~g~g~g~~~~ 206 (380)
+.. +.+|.++..++. |....-+ .| ..|...++ .+..++.+++++.|+|.++.+-
T Consensus 92 ~~w------h~~gt~lVslSf--~~ifg~a-~i-------F~~~~~~s~vanlglyaialvVFgv~~A~~ke 147 (412)
T KOG4830|consen 92 MSW------HLIGTVLVSLSF--PMIFGFA-KI-------FLCKSTTSEVANLGLYAIALVVFGVGWASVKE 147 (412)
T ss_pred eee------eecccEEEEEec--hhhcCce-eE-------EeeccHHHHHHHhHHHHHHhheeeeeeecccc
Confidence 754 334444433321 1110000 01 12333222 3556677777777877777653
No 306
>PF03988 DUF347: Repeat of Unknown Function (DUF347) ; InterPro: IPR007136 This repeat is found as four tandem repeats in a family of bacterial membrane proteins. Each repeat contains two transmembrane regions and a conserved tryptophan.
Probab=38.70 E-value=1.2e+02 Score=20.70 Aligned_cols=23 Identities=13% Similarity=0.174 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHHHHHhhhcchhh
Q 016902 237 SVTVGAIVAFTLVVYIQMEHGWG 259 (380)
Q Consensus 237 ~~~iG~~i~~~i~~~i~~~~gw~ 259 (380)
...+...+|..++-++.+..|+.
T Consensus 6 a~ilt~~lGt~~~D~l~~~lglg 28 (55)
T PF03988_consen 6 AKILTTTLGTTAGDFLSKTLGLG 28 (55)
T ss_pred HHHHHHHhHHHHHHHHHhccCcc
Confidence 34455667777777887765543
No 307
>PF13829 DUF4191: Domain of unknown function (DUF4191)
Probab=37.88 E-value=1.1e+02 Score=27.66 Aligned_cols=48 Identities=15% Similarity=0.252 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHHhhcc
Q 016902 231 FNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTP 281 (380)
Q Consensus 231 ~~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~~~~~~~ 281 (380)
..|+.++..++.++..++.+++.. +.|.+.+.++...+.+.++.++++
T Consensus 27 l~~~ml~a~l~~~~v~v~ig~l~~---~~~~~~i~gi~~g~l~am~vl~rr 74 (224)
T PF13829_consen 27 LPWLMLGAFLGPIAVFVLIGLLFG---SWWYWLIIGILLGLLAAMIVLSRR 74 (224)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHc---cHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555555555554455555543 334444444444444444444443
No 308
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=36.68 E-value=2.4e+02 Score=27.17 Aligned_cols=75 Identities=15% Similarity=0.020 Sum_probs=52.4
Q ss_pred HHHHHHHHHHhHHHHHHHhcCCC-HHHHHHH----HHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHh
Q 016902 81 ERMAYFGLSVNMVTFMFYVMHKS-FADSSNA----VNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITL 155 (380)
Q Consensus 81 ~~~~~~~i~~~l~~yl~~~~~~s-~~~a~~~----~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l 155 (380)
-.++.-++-+|+.++..+++.-+ ....... ....+.+..++..+.+++-|.+ |-...+.+..+..+++.+.+..
T Consensus 43 ia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~-~~~~~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 43 IAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNY-GWFLGFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp HHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS--HHHHHHHHHHHHHHHHHHHHC
T ss_pred HHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhcccc-chhhhhhHHHHHHHHHHHHHHh
Confidence 35666678899999999998876 4444433 3444455555666667888887 8888888888888887776665
Q ss_pred h
Q 016902 156 C 156 (380)
Q Consensus 156 ~ 156 (380)
.
T Consensus 122 ~ 122 (372)
T PF00854_consen 122 G 122 (372)
T ss_dssp C
T ss_pred C
Confidence 3
No 309
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=35.37 E-value=2.3e+02 Score=22.58 Aligned_cols=34 Identities=6% Similarity=-0.108 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHHHhhhcc-h-hhHHHHHHHHHHHHH
Q 016902 239 TVGAIVAFTLVVYIQMEH-G-WGSAFGALAIAMGIS 272 (380)
Q Consensus 239 ~iG~~i~~~i~~~i~~~~-g-w~~~f~i~~~~~~~~ 272 (380)
.|++.+-..++||+.+++ | -.|+.++..++-+++
T Consensus 52 fIsGilVGa~iG~llD~~agTsPwglIv~lllGf~A 87 (116)
T COG5336 52 FISGILVGAGIGWLLDKFAGTSPWGLIVFLLLGFGA 87 (116)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Confidence 344444445667887765 2 234444444443333
No 310
>PRK02237 hypothetical protein; Provisional
Probab=34.24 E-value=91 Score=24.77 Aligned_cols=50 Identities=22% Similarity=0.122 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHh
Q 016902 105 ADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITL 155 (380)
Q Consensus 105 ~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l 155 (380)
..++-+...|.+.+.+.+++.+++.|.. -.-+.=.++..++++|..+..+
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~-~Pd~~D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGV-RPDRWDWIGAAICLVGMAVIMY 105 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCc-CCChhHHHhHHHHHHhHHHhee
Confidence 3477888899999999999999999987 5555667788888888766543
No 311
>COG4232 Thiol:disulfide interchange protein [Posttranslational modification, protein turnover, chaperones / Energy production and conversion]
Probab=33.45 E-value=5.8e+02 Score=26.63 Aligned_cols=31 Identities=19% Similarity=0.195 Sum_probs=22.1
Q ss_pred HHHHHHHHHHhccchhhhhhhHhhccCCCCC
Q 016902 190 LYTVLYITGFGAAGIRPCVSSFGADQFDERS 220 (380)
Q Consensus 190 l~~~l~l~g~g~g~~~~~~~~~~ad~f~~~~ 220 (380)
-...++.+|+|.|...-.+..++....|...
T Consensus 328 g~~~l~al~LGMg~Plllv~~f~~~~LPk~G 358 (569)
T COG4232 328 GGLALYALGLGMGLPLLLIGVFGNRLLPKPG 358 (569)
T ss_pred HHHHHHHHHHhcccchhhheecccccCCCCC
Confidence 3344567888888888777777777777544
No 312
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=31.79 E-value=2.2e+02 Score=22.29 Aligned_cols=21 Identities=10% Similarity=0.294 Sum_probs=11.8
Q ss_pred HHHHHHHHHHHHHHHhhhcch
Q 016902 237 SVTVGAIVAFTLVVYIQMEHG 257 (380)
Q Consensus 237 ~~~iG~~i~~~i~~~i~~~~g 257 (380)
...+..++|..++-|+-..++
T Consensus 51 ~~v~pil~G~~lG~WLD~~~~ 71 (100)
T TIGR02230 51 SVAIPTLLGVAVGIWLDRHYP 71 (100)
T ss_pred HHHHHHHHHHHHHHHHHhhcC
Confidence 334444555566667766655
No 313
>PF14007 YtpI: YtpI-like protein
Probab=31.31 E-value=1.4e+02 Score=22.78 Aligned_cols=30 Identities=27% Similarity=0.303 Sum_probs=23.3
Q ss_pred hHHHHHHHHHHHHHHHHHHhhcccccccCC
Q 016902 259 GSAFGALAIAMGISNMLFFIGTPLYRHRLP 288 (380)
Q Consensus 259 ~~~f~i~~~~~~~~~i~~~~~~~~~~~~~~ 288 (380)
...+.+.+++.++++.-.+.+.|.|++-.|
T Consensus 57 t~~~iV~~ifl~lG~~n~~~G~r~y~hy~p 86 (89)
T PF14007_consen 57 TVRLIVGAIFLVLGLFNLFAGIRAYRHYRP 86 (89)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHhhhh
Confidence 456677888888888888888888887654
No 314
>KOG1278 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=30.54 E-value=6.4e+02 Score=26.26 Aligned_cols=31 Identities=6% Similarity=0.109 Sum_probs=19.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016902 102 KSFADSSNAVNNFLGISQASSVLGGFLADAY 132 (380)
Q Consensus 102 ~s~~~a~~~~~~~~~~~~~~~l~~g~lsD~~ 132 (380)
++++.-+.+.+...+...++.+++|+.|-|.
T Consensus 356 lSPs~RGsLmT~~~~l~v~~G~~agY~s~rl 386 (628)
T KOG1278|consen 356 LSPSSRGSLMTAMVLLFVFMGFVAGYVSARL 386 (628)
T ss_pred CCccccccHHHHHHHHHHHHHHhhhhhhhhh
Confidence 3555556666666666666667777776654
No 315
>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger.
Probab=30.42 E-value=3.4e+02 Score=30.22 Aligned_cols=21 Identities=5% Similarity=-0.322 Sum_probs=11.8
Q ss_pred hHHHHHHHhcCCCHHHHHHHH
Q 016902 91 NMVTFMFYVMHKSFADSSNAV 111 (380)
Q Consensus 91 ~l~~yl~~~~~~s~~~a~~~~ 111 (380)
++...+-..+|++....++.+
T Consensus 954 ~~at~IG~vlGIse~VmGlTf 974 (1096)
T TIGR00927 954 WWAHQVGETIGISEEIMGLTI 974 (1096)
T ss_pred HHHHHhhhhcCCChhhhhhhh
Confidence 344555556777766555443
No 316
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=30.41 E-value=4.8e+02 Score=24.77 Aligned_cols=42 Identities=17% Similarity=0.157 Sum_probs=21.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHH
Q 016902 68 WIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAV 111 (380)
Q Consensus 68 ~~~~~~i~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~ 111 (380)
|..+.+.....+.|-.+ |+.++-..-+...+|+-.-..++.+
T Consensus 25 ~~~~~L~~~f~~iE~i~--g~~s~SlaLLADa~Hml~D~~al~l 66 (296)
T COG1230 25 LIALLLNLAFMLIEIIG--GLLTGSLALLADALHMLSDALALLL 66 (296)
T ss_pred HHHHHHHHHHHHHHHHH--HHHhccHHHHHhHHHHHHHHHHHHH
Confidence 33334444344444333 4555656667777776554444443
No 317
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=30.16 E-value=2.4e+02 Score=21.28 Aligned_cols=63 Identities=14% Similarity=0.037 Sum_probs=31.3
Q ss_pred HHHhccchhhhhhhHhhccCCCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHH
Q 016902 197 TGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIA 268 (380)
Q Consensus 197 ~g~g~g~~~~~~~~~~ad~f~~~~~~~~~~r~~~~~~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~ 268 (380)
+|+|--.+.|..+.+..|.-=. ...-+|....+.+|.++|.+...++......+..+.+..+.
T Consensus 4 mGigRFayTplLP~M~~~~~ls---------~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~ 66 (85)
T PF06779_consen 4 MGIGRFAYTPLLPLMQADGGLS---------LSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLL 66 (85)
T ss_pred hhhHHHHHHhHhHHHHHhcCCC---------HHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 3455445556666666553221 12233444455566666666666665544434344433333
No 318
>PRK10692 hypothetical protein; Provisional
Probab=29.07 E-value=87 Score=23.74 Aligned_cols=23 Identities=13% Similarity=0.005 Sum_probs=17.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHhh
Q 016902 134 GRYWTIAIFTTIYLAGLTGITLC 156 (380)
Q Consensus 134 GR~~~i~i~~~l~~lg~~~l~l~ 156 (380)
-||.+.+++.++..+|++.+..+
T Consensus 2 KRk~a~~~GN~lMglGmv~Mv~g 24 (92)
T PRK10692 2 KRKNASLLGNVLMGLGLVVMVVG 24 (92)
T ss_pred cchhhHHHhhHHHHHHHHHHHHH
Confidence 47788888888888888776653
No 319
>PRK11469 hypothetical protein; Provisional
Probab=28.09 E-value=4.1e+02 Score=23.25 Aligned_cols=52 Identities=13% Similarity=0.125 Sum_probs=30.8
Q ss_pred CCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHH
Q 016902 101 HKSFADSSNAVNNFLGISQA-SSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGI 153 (380)
Q Consensus 101 ~~s~~~a~~~~~~~~~~~~~-~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l 153 (380)
|.+.......+.+....... +..+|-.+..+ +|||..++-+.++..+|.-.+
T Consensus 130 g~~~~~~~~~ig~~s~~~~~~G~~lG~~~g~~-~g~~a~~lgG~iLI~iGi~il 182 (188)
T PRK11469 130 QVNIIATALAIGCATLIMSTLGMMVGRFIGSI-IGKKAEILGGLVLIGIGVQIL 182 (188)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 44444444444444433333 33355556665 499988888888888887654
No 320
>KOG1484 consensus Putative Zn2+ transporter MSC2 (cation diffusion facilitator superfamily) [Inorganic ion transport and metabolism]
Probab=27.02 E-value=5.9e+02 Score=24.68 Aligned_cols=46 Identities=20% Similarity=0.332 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHHhhcc
Q 016902 233 FFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTP 281 (380)
Q Consensus 233 ~~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~~i~~~~~~~ 281 (380)
..-++-.+|+ +|.++..++.+..||.++=-++.++. ++++|....|
T Consensus 212 LHVLaDtlgS-vGviist~Li~~~gw~~aDpicsllI--ailIf~sv~P 257 (354)
T KOG1484|consen 212 LHVLADTLGS-VGVIISTLLIKLFGWMIADPICSLLI--AILIFLSVLP 257 (354)
T ss_pred HHHHHHHhcc-hHHHHHHHHHHhcCccchhHHHHHHH--HHHHHHHHHH
Confidence 3344444544 45667777778788877655544443 4444443333
No 321
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=26.82 E-value=3.2e+02 Score=21.64 Aligned_cols=50 Identities=24% Similarity=0.184 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHh
Q 016902 105 ADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITL 155 (380)
Q Consensus 105 ~~a~~~~~~~~~~~~~~~l~~g~lsD~~~GR~~~i~i~~~l~~lg~~~l~l 155 (380)
..++-....|.+.+.+.+++.++..|.. -.-+.=+++..++++|..+..+
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~-~Pd~~D~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGV-RPDRWDWIGAAICLVGVAIILF 103 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCc-CCChHHHHhHHHHHHhHHheEe
Confidence 4567788889999999999999999987 6666667788888888776544
No 322
>PF11744 ALMT: Aluminium activated malate transporter; InterPro: IPR020966 This entry represents an malate transporter which has been is identified as being critical for aluminium tolerance in Arabidopsis thaliana [].; GO: 0010044 response to aluminum ion
Probab=26.66 E-value=6.5e+02 Score=25.07 Aligned_cols=24 Identities=25% Similarity=0.397 Sum_probs=11.2
Q ss_pred HHHHHhhcch-hHHHHHHHHHHHHHH
Q 016902 126 GFLADAYLGR-YWTIAIFTTIYLAGL 150 (380)
Q Consensus 126 g~lsD~~~GR-~~~i~i~~~l~~lg~ 150 (380)
.+++... |. .+.++++..+++++.
T Consensus 81 ~~la~~~-g~~~~~~~i~~~vFi~~~ 105 (406)
T PF11744_consen 81 SWLASLS-GDPGEPIVIGISVFIIGF 105 (406)
T ss_pred HHHHHhc-CccchhHHHHHHHHHHHH
Confidence 3444443 44 444555554554444
No 323
>TIGR02123 TRAP_fused TRAP transporter, 4TM/12TM fusion protein. In some species, the 12-transmembrane spanning and 4-transmembrane spanning components of tripartite ATP-independent periplasmic (TRAP)-type transporters are fused. This model describes such transporters, found in the Archaea and in Bacteria.
Probab=26.10 E-value=6.9e+02 Score=26.40 Aligned_cols=51 Identities=6% Similarity=-0.057 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHH
Q 016902 75 FGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLG 125 (380)
Q Consensus 75 ~~~~~~~~~~~~~i~~~l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~ 125 (380)
++..+++..+.|.+...+..-...++|+++...+..+..+...+.++|+++
T Consensus 441 ilGm~l~~~a~~ii~~pi~~P~l~~lGidpi~~~~~v~~~~~ig~iTPPvg 491 (613)
T TIGR02123 441 ILGMGLPTTANYIITATLAAPALIALGVPPIAAHMFVFYFGILADITPPVA 491 (613)
T ss_pred HHHhcccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCCCch
Confidence 334455666677666655555567899999999999999999999999887
No 324
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=25.56 E-value=3.3e+02 Score=22.94 Aligned_cols=9 Identities=44% Similarity=0.637 Sum_probs=4.2
Q ss_pred HHHHHHHhh
Q 016902 124 LGGFLADAY 132 (380)
Q Consensus 124 ~~g~lsD~~ 132 (380)
++++++|+.
T Consensus 91 v~~~La~~L 99 (150)
T COG3086 91 LGAILAQYL 99 (150)
T ss_pred HHHHHHHHH
Confidence 344455543
No 325
>TIGR01148 mtrC N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit C. coenzyme M methyltransferase subunit C in methanogenic archaea. This methyltranferase is membrane-associated enzyme complex that uses methyl-transfer reaction to drive sodium-ion pump. Archaea have evolved energy-yielding pathways marked by one-carbon biochemistry featuring novel cofactors and enzymes. This transferase is involved in the transfer of 'methyl' group from N5-methyltetrahydromethanopterin to coenzyme M. In an accompanying reaction, methane is produced by two-electron reduction of the methyl moiety in methyl-coenzyme M by another enzyme methyl-coenzyme M reductase.
Probab=25.16 E-value=5.5e+02 Score=23.74 Aligned_cols=26 Identities=19% Similarity=0.119 Sum_probs=16.5
Q ss_pred HHHHHHHHHhhcchhHHHHHHHHHHH
Q 016902 122 SVLGGFLADAYLGRYWTIAIFTTIYL 147 (380)
Q Consensus 122 ~l~~g~lsD~~~GR~~~i~i~~~l~~ 147 (380)
..+.|.++.+.+|-|-.++.-+...+
T Consensus 114 G~vvG~la~~vi~MkIPiM~~~mtel 139 (265)
T TIGR01148 114 GGVVGVLANKVIGMKIPIMERCMTEI 139 (265)
T ss_pred HHHHHHHHhccccCCCchHHHHHHHH
Confidence 34557888888887766655544443
No 326
>PF03213 Pox_P35: Poxvirus P35 protein; InterPro: IPR004900 The Poxvirus P35 protein is an immunodominant envelope protein. It binds to heparan sulphate on the cell surface to provide virion attachment to target cell [].; GO: 0019031 viral envelope
Probab=24.90 E-value=1.7e+02 Score=27.96 Aligned_cols=15 Identities=33% Similarity=0.483 Sum_probs=10.2
Q ss_pred HHHHHHHHHHHHHhh
Q 016902 118 SQASSVLGGFLADAY 132 (380)
Q Consensus 118 ~~~~~l~~g~lsD~~ 132 (380)
..+.+.++.|++++|
T Consensus 255 ~~~wsrl~~Wla~~~ 269 (325)
T PF03213_consen 255 NSIWSRLGKWLAKRF 269 (325)
T ss_pred hhHHHHHHHHHHhhC
Confidence 345567778888765
No 327
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=24.80 E-value=88 Score=29.12 Aligned_cols=55 Identities=13% Similarity=0.256 Sum_probs=32.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHh---hh--cchhhHHHHHHHHHHHHHHHHHH-hhcc
Q 016902 227 LDRFFNFFYLSVTVGAIVAFTLVVYI---QM--EHGWGSAFGALAIAMGISNMLFF-IGTP 281 (380)
Q Consensus 227 r~~~~~~~~~~~~iG~~i~~~i~~~i---~~--~~gw~~~f~i~~~~~~~~~i~~~-~~~~ 281 (380)
|+...++-.++.++|+.++.+..... ++ ...|++.+.+.+++.++-++++. ++.+
T Consensus 4 K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ifGk~ 64 (267)
T PF07672_consen 4 KSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIFGKN 64 (267)
T ss_pred cceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 55555556667778877764332221 11 23599999888877766666654 4444
No 328
>PHA02688 ORF059 IMV protein VP55; Provisional
Probab=24.72 E-value=1.7e+02 Score=27.84 Aligned_cols=15 Identities=40% Similarity=0.534 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHHHhh
Q 016902 118 SQASSVLGGFLADAY 132 (380)
Q Consensus 118 ~~~~~l~~g~lsD~~ 132 (380)
..+.+.+++|++++|
T Consensus 253 ~~lwsrl~~Wla~~~ 267 (323)
T PHA02688 253 NSLWSRLGTWLAKRY 267 (323)
T ss_pred hhHHHHHHHHHHhhC
Confidence 345677888888876
No 329
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=24.63 E-value=2.5e+02 Score=19.49 Aligned_cols=39 Identities=18% Similarity=0.165 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHH
Q 016902 234 FYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGIS 272 (380)
Q Consensus 234 ~~~~~~iG~~i~~~i~~~i~~~~gw~~~f~i~~~~~~~~ 272 (380)
+.|+..+|..++.++.......+++..+..+..+...+.
T Consensus 7 ~fWs~il~~vvgyI~ssL~~~~~n~~~~~Ii~vi~~i~~ 45 (57)
T PF11151_consen 7 FFWSFILGEVVGYIGSSLTGVTYNFTTAAIIAVIFGIIV 45 (57)
T ss_pred hHHHHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHH
Confidence 456667777777655554444555555544444444333
No 330
>PF11119 DUF2633: Protein of unknown function (DUF2633); InterPro: IPR022576 This family is conserved largely in Proteobacteria. Several members are named as YfgG. The function is not known.
Probab=24.53 E-value=1.6e+02 Score=20.61 Aligned_cols=25 Identities=16% Similarity=-0.024 Sum_probs=19.5
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHh
Q 016902 67 GWIAALFIFGNEMAERMAYFGLSVN 91 (380)
Q Consensus 67 ~~~~~~~i~~~~~~~~~~~~~i~~~ 91 (380)
--+.++++.+..++.++.|+++.++
T Consensus 9 mtriVLLISfiIlfgRl~Y~~I~a~ 33 (59)
T PF11119_consen 9 MTRIVLLISFIILFGRLIYSAIGAW 33 (59)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 3456778888888889999888765
No 331
>COG2364 Predicted membrane protein [Function unknown]
Probab=23.83 E-value=3.6e+02 Score=24.06 Aligned_cols=23 Identities=17% Similarity=0.361 Sum_probs=17.7
Q ss_pred hHHHHHHHHHHHHHhccchhhhh
Q 016902 186 QMLYLYTVLYITGFGAAGIRPCV 208 (380)
Q Consensus 186 ~~~~l~~~l~l~g~g~g~~~~~~ 208 (380)
.+..+.++.+++|+|.+....+.
T Consensus 106 k~i~~~iG~vL~g~Gt~iyv~~n 128 (210)
T COG2364 106 KLIFFLIGLVLIGLGTAIYVTAN 128 (210)
T ss_pred HHHHHHHHHHHHHhhhheeEecC
Confidence 46678888999999998866443
No 332
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=23.03 E-value=7.5e+02 Score=24.52 Aligned_cols=36 Identities=17% Similarity=0.383 Sum_probs=25.2
Q ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016902 92 MVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLAD 130 (380)
Q Consensus 92 l~~yl~~~~~~s~~~a~~~~~~~~~~~~~~~l~~g~lsD 130 (380)
+.+|+ .|-+..+.+.+++.|.....+|+.+.=++.|
T Consensus 33 LatyL---lG~~Ilq~S~Iia~yl~amGlGs~~sry~~d 68 (508)
T COG4262 33 LATYL---LGGGILQTSLIIAGYLAAMGLGSLLSRYVLD 68 (508)
T ss_pred HHHHh---cCCceeehHHHHHHHHHHhchhhhhhccccC
Confidence 44554 4555667788888888888888777766655
No 333
>PRK10263 DNA translocase FtsK; Provisional
Probab=23.00 E-value=7.2e+02 Score=28.90 Aligned_cols=18 Identities=11% Similarity=-0.112 Sum_probs=8.7
Q ss_pred HHHHHHHHHHHHHhccch
Q 016902 187 MLYLYTVLYITGFGAAGI 204 (380)
Q Consensus 187 ~~~l~~~l~l~g~g~g~~ 204 (380)
.+.++...++..||.+.+
T Consensus 67 VGA~LAD~L~~LFGl~AY 84 (1355)
T PRK10263 67 PGAWLADTLFFIFGVMAY 84 (1355)
T ss_pred HHHHHHHHHHHHHhHHHH
Confidence 344444444445555443
No 334
>PRK03612 spermidine synthase; Provisional
Probab=22.35 E-value=8.6e+02 Score=24.98 Aligned_cols=14 Identities=29% Similarity=0.192 Sum_probs=5.9
Q ss_pred ccCCchhHHHHHHH
Q 016902 362 KLCTVTQVEEVKTL 375 (380)
Q Consensus 362 ~l~t~~qVE~~K~~ 375 (380)
+++|.+=.+++|..
T Consensus 391 ~L~t~ef~~~~~~~ 404 (521)
T PRK03612 391 KLYSVEFYRLLKRR 404 (521)
T ss_pred ccchHHHHHHHHHh
Confidence 44444434444443
No 335
>PRK13747 putative mercury resistance protein; Provisional
Probab=22.33 E-value=3.2e+02 Score=20.07 Aligned_cols=20 Identities=15% Similarity=-0.099 Sum_probs=10.0
Q ss_pred CCCCchhhhhhhhHHHHHHH
Q 016902 217 DERSKDYKTHLDRFFNFFYL 236 (380)
Q Consensus 217 ~~~~~~~~~~r~~~~~~~~~ 236 (380)
|++.|.|..+.-+++-|...
T Consensus 4 ~e~~p~e~~~~~~~YlWg~l 23 (78)
T PRK13747 4 PERLPSETHKPITGYLWGAL 23 (78)
T ss_pred cccCChhhcCcchhhhhHHH
Confidence 34444454445556555444
No 336
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=21.92 E-value=3.3e+02 Score=20.01 Aligned_cols=26 Identities=19% Similarity=0.382 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016902 107 SSNAVNNFLGISQASSVLGGFLADAY 132 (380)
Q Consensus 107 a~~~~~~~~~~~~~~~l~~g~lsD~~ 132 (380)
+..+.........+.+.+.|++.+.+
T Consensus 9 ae~l~~~il~~~~iisfi~Gy~~q~~ 34 (76)
T PF06645_consen 9 AEKLMQYILIISAIISFIVGYITQSF 34 (76)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444555555666677888888887
No 337
>PF10762 DUF2583: Protein of unknown function (DUF2583) ; InterPro: IPR019698 Some members in this entry are annotated as YchH however currently no function is known.
Probab=21.15 E-value=1.4e+02 Score=22.48 Aligned_cols=23 Identities=9% Similarity=-0.061 Sum_probs=17.2
Q ss_pred chhHHHHHHHHHHHHHHHHHHhh
Q 016902 134 GRYWTIAIFTTIYLAGLTGITLC 156 (380)
Q Consensus 134 GR~~~i~i~~~l~~lg~~~l~l~ 156 (380)
-||.+.+++..+..+|++.+..+
T Consensus 2 KRk~a~~~GN~lMglGmv~Mv~g 24 (89)
T PF10762_consen 2 KRKNAFLLGNVLMGLGMVVMVGG 24 (89)
T ss_pred CchhhHHHhhHHHHHhHHHHHHh
Confidence 47788888888888887776543
No 338
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=20.83 E-value=5.8e+02 Score=22.45 Aligned_cols=19 Identities=5% Similarity=-0.078 Sum_probs=7.6
Q ss_pred HHHHHHHHHHHHHhhhhcc
Q 016902 142 FTTIYLAGLTGITLCATMK 160 (380)
Q Consensus 142 ~~~l~~lg~~~l~l~~~~~ 160 (380)
+.+..++.+++..+...+|
T Consensus 153 ~~~~~~~w~~~~~~~~~lp 171 (206)
T PF06570_consen 153 SVLAMVLWIVIFVLTSFLP 171 (206)
T ss_pred HHHHHHHHHHHHHHHHHcc
Confidence 3333334444444444333
No 339
>PRK01030 tetrahydromethanopterin S-methyltransferase subunit C; Provisional
Probab=20.51 E-value=6.9e+02 Score=23.16 Aligned_cols=28 Identities=25% Similarity=0.229 Sum_probs=17.8
Q ss_pred HHHHHHHHHhhcchhHHHHHHHHHHHHH
Q 016902 122 SVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (380)
Q Consensus 122 ~l~~g~lsD~~~GR~~~i~i~~~l~~lg 149 (380)
..+.|.++.+.+|-|-.++.-+...+.+
T Consensus 108 G~vvG~lan~vigMkIPiM~~smtels~ 135 (264)
T PRK01030 108 GAVVGKLANNVVGMKIPIMERSMTELSG 135 (264)
T ss_pred HHHHHHHHcccccCCCchHHHHHHHHHH
Confidence 3455788888888776666555544433
No 340
>PF02659 DUF204: Domain of unknown function DUF; InterPro: IPR003810 Uncharacterised domain in proteins of unknown function.
Probab=20.50 E-value=3.1e+02 Score=19.17 Aligned_cols=24 Identities=21% Similarity=0.299 Sum_probs=11.0
Q ss_pred HHHHHHHHhhcchhHHHHHHHHHHH
Q 016902 123 VLGGFLADAYLGRYWTIAIFTTIYL 147 (380)
Q Consensus 123 l~~g~lsD~~~GR~~~i~i~~~l~~ 147 (380)
.++..+.+ +++++--++.+.++..
T Consensus 42 ~~G~~~~~-~~~~~~~~igg~iLi~ 65 (67)
T PF02659_consen 42 LLGRRLGR-FIGSYAEWIGGIILIF 65 (67)
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 33334444 3466644444444443
No 341
>PTZ00370 STEVOR; Provisional
Probab=20.39 E-value=2e+02 Score=27.01 Aligned_cols=7 Identities=0% Similarity=-0.278 Sum_probs=3.3
Q ss_pred HhhccCC
Q 016902 211 FGADQFD 217 (380)
Q Consensus 211 ~~ad~f~ 217 (380)
.+-.+|.
T Consensus 217 sIfNMF~ 223 (296)
T PTZ00370 217 SIFNMLS 223 (296)
T ss_pred heeecCC
Confidence 3445554
Done!