BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016905
(380 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 158 bits (400), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 77/126 (61%), Positives = 96/126 (76%)
Query: 235 RKLKHDVFFDVAGEDDCKVSLTQLRRFSCRELQLATDNFSESNIIGQGGFGKVYKGVLSD 294
RK D FFDV E+D +V L QL+RFS RELQ+A+DNFS NI+G+GGFGKVYKG L+D
Sbjct: 2 RKKPQDHFFDVPAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLAD 61
Query: 295 NTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLS 354
T VAVKRL++ GGE FQ EV +IS+A+H+NLL+L G+C T +ER+LVYP+M N S
Sbjct: 62 GTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGS 121
Query: 355 VAYRLR 360
VA LR
Sbjct: 122 VASCLR 127
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 151 bits (381), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 72/119 (60%), Positives = 92/119 (77%)
Query: 242 FFDVAGEDDCKVSLTQLRRFSCRELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVK 301
FFDV E+D +V L QL+RFS RELQ+A+DNF NI+G+GGFGKVYKG L+D VAVK
Sbjct: 1 FFDVPAEEDPEVHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVK 60
Query: 302 RLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLR 360
RL++ + GGE FQ EV +IS+A+H+NLL+L G+C T +ER+LVYP+M N SVA LR
Sbjct: 61 RLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLR 119
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Query: 260 RFSCRELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREV 319
R +L+ AT+NF +IG G FGKVYKGVL D KVA+KR S G E
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 320 HLISVAIHKNLLQLIGYCTTSSERILVYPFMQN 352
L S H +L+ LIG+C +E IL+Y +M+N
Sbjct: 88 TL-SFCRHPHLVSLIGFCDERNEMILIYKYMEN 119
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Query: 260 RFSCRELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREV 319
R +L+ AT+NF +IG G FGKVYKGVL D KVA+KR S G E
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 320 HLISVAIHKNLLQLIGYCTTSSERILVYPFMQN 352
L S H +L+ LIG+C +E IL+Y +M+N
Sbjct: 88 TL-SFCRHPHLVSLIGFCDERNEMILIYKYMEN 119
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 64/118 (54%), Gaps = 2/118 (1%)
Query: 74 RNGNVISLTLGSNGFSGKISPSITKLKFLASLELQDNDLSGTLPDFLGSMTHLQSLNLAN 133
NG+++ L + N SG I I + +L L L ND+SG++PD +G + L L+L++
Sbjct: 627 NNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSS 686
Query: 134 NKFSGSIPATWSQLSNLKHLDLSSNNLTGRIPM--QLFSVATFNFTGTHLICGSSLEQ 189
NK G IP S L+ L +DLS+NNL+G IP Q + F +CG L +
Sbjct: 687 NKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLPR 744
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 54/96 (56%)
Query: 81 LTLGSNGFSGKISPSITKLKFLASLELQDNDLSGTLPDFLGSMTHLQSLNLANNKFSGSI 140
L L +NGF+GKI P+++ L SL L N LSGT+P LGS++ L+ L L N G I
Sbjct: 396 LYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEI 455
Query: 141 PATWSQLSNLKHLDLSSNNLTGRIPMQLFSVATFNF 176
P + L+ L L N+LTG IP L + N+
Sbjct: 456 PQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNW 491
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 45/81 (55%)
Query: 88 FSGKISPSITKLKFLASLELQDNDLSGTLPDFLGSMTHLQSLNLANNKFSGSIPATWSQL 147
+ G SP+ + L++ N LSG +P +GSM +L LNL +N SGSIP L
Sbjct: 617 YGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDL 676
Query: 148 SNLKHLDLSSNNLTGRIPMQL 168
L LDLSSN L GRIP +
Sbjct: 677 RGLNILDLSSNKLDGRIPQAM 697
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 52/88 (59%)
Query: 81 LTLGSNGFSGKISPSITKLKFLASLELQDNDLSGTLPDFLGSMTHLQSLNLANNKFSGSI 140
L L N G+I + +K L +L L NDL+G +P L + T+L ++L+NN+ +G I
Sbjct: 444 LKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEI 503
Query: 141 PATWSQLSNLKHLDLSSNNLTGRIPMQL 168
P +L NL L LS+N+ +G IP +L
Sbjct: 504 PKWIGRLENLAILKLSNNSFSGNIPAEL 531
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 51/90 (56%)
Query: 80 SLTLGSNGFSGKISPSITKLKFLASLELQDNDLSGTLPDFLGSMTHLQSLNLANNKFSGS 139
+L L N +G+I ++ L + L +N L+G +P ++G + +L L L+NN FSG+
Sbjct: 467 TLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGN 526
Query: 140 IPATWSQLSNLKHLDLSSNNLTGRIPMQLF 169
IPA +L LDL++N G IP +F
Sbjct: 527 IPAELGDCRSLIWLDLNTNLFNGTIPAAMF 556
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 64/116 (55%), Gaps = 5/116 (4%)
Query: 53 QFTDWNDHFVSPCFSWSHVTCRNGNVISLTLGSNGFSGKISPSITKLKFLASLELQDNDL 112
Q D + + +S FS + TC +++++ SN F G I P LK L L L +N
Sbjct: 223 QHLDISGNKLSGDFSRAISTCTELKLLNIS--SNQFVGPIPP--LPLKSLQYLSLAENKF 278
Query: 113 SGTLPDFL-GSMTHLQSLNLANNKFSGSIPATWSQLSNLKHLDLSSNNLTGRIPMQ 167
+G +PDFL G+ L L+L+ N F G++P + S L+ L LSSNN +G +PM
Sbjct: 279 TGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMD 334
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 55/109 (50%), Gaps = 9/109 (8%)
Query: 76 GNVISLTLGSNGFSGKISPSITKLKFLASLELQDNDLSGTLPDFLGSMTHLQSLNLANNK 135
G + L + N SG + +++ L L++ N+ S +P FLG + LQ L+++ NK
Sbjct: 175 GELKHLAISGNKISGDVD--VSRCVNLEFLDVSSNNFSTGIP-FLGDCSALQHLDISGNK 231
Query: 136 FSGSIPATWSQLSNLKHLDLSSNNLTGRIP------MQLFSVATFNFTG 178
SG S + LK L++SSN G IP +Q S+A FTG
Sbjct: 232 LSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTG 280
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 78 VISLTLGSNGFSGKISPSITKLKFLASLELQDNDLSGTLP-DFLGSMTHLQSLNLANNKF 136
+ L L N F G + P L SL L N+ SG LP D L M L+ L+L+ N+F
Sbjct: 293 LTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEF 352
Query: 137 SGSIPATWSQLS-NLKHLDLSSNNLTGRI 164
SG +P + + LS +L LDLSSNN +G I
Sbjct: 353 SGELPESLTNLSASLLTLDLSSNNFSGPI 381
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 72 TCRNGNVISLTLGSNGFSGKISPSITKLKFLASLELQDNDLSGTLPDFLGSMTHLQSLNL 131
C N N ISL+ +N +G+I I +L+ LA L+L +N SG +P LG L L+L
Sbjct: 485 NCTNLNWISLS--NNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDL 542
Query: 132 ANNKFSGSIPA 142
N F+G+IPA
Sbjct: 543 NTNLFNGTIPA 553
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 69/137 (50%), Gaps = 33/137 (24%)
Query: 56 DWNDHFVSPCFSWSHVTCRNGNVISLTLGSN----GFSG-------------------KI 92
DW+ + +PC ++ VTCR+ V S+ L S GFS I
Sbjct: 29 DWSSN-KNPC-TFDGVTCRDDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSNSHI 86
Query: 93 SPSITKLK---FLASLELQDNDLSGTLPDF--LGSMTHLQSLNLANN--KFSGSIPATWS 145
+ S++ K L SL+L N LSG + LGS + L+ LN+++N F G +
Sbjct: 87 NGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGL- 145
Query: 146 QLSNLKHLDLSSNNLTG 162
+L++L+ LDLS+N+++G
Sbjct: 146 KLNSLEVLDLSANSISG 162
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 64/118 (54%), Gaps = 2/118 (1%)
Query: 74 RNGNVISLTLGSNGFSGKISPSITKLKFLASLELQDNDLSGTLPDFLGSMTHLQSLNLAN 133
NG+++ L + N SG I I + +L L L ND+SG++PD +G + L L+L++
Sbjct: 630 NNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSS 689
Query: 134 NKFSGSIPATWSQLSNLKHLDLSSNNLTGRIPM--QLFSVATFNFTGTHLICGSSLEQ 189
NK G IP S L+ L +DLS+NNL+G IP Q + F +CG L +
Sbjct: 690 NKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLPR 747
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 54/96 (56%)
Query: 81 LTLGSNGFSGKISPSITKLKFLASLELQDNDLSGTLPDFLGSMTHLQSLNLANNKFSGSI 140
L L +NGF+GKI P+++ L SL L N LSGT+P LGS++ L+ L L N G I
Sbjct: 399 LYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEI 458
Query: 141 PATWSQLSNLKHLDLSSNNLTGRIPMQLFSVATFNF 176
P + L+ L L N+LTG IP L + N+
Sbjct: 459 PQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNW 494
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 45/81 (55%)
Query: 88 FSGKISPSITKLKFLASLELQDNDLSGTLPDFLGSMTHLQSLNLANNKFSGSIPATWSQL 147
+ G SP+ + L++ N LSG +P +GSM +L LNL +N SGSIP L
Sbjct: 620 YGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDL 679
Query: 148 SNLKHLDLSSNNLTGRIPMQL 168
L LDLSSN L GRIP +
Sbjct: 680 RGLNILDLSSNKLDGRIPQAM 700
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 52/88 (59%)
Query: 81 LTLGSNGFSGKISPSITKLKFLASLELQDNDLSGTLPDFLGSMTHLQSLNLANNKFSGSI 140
L L N G+I + +K L +L L NDL+G +P L + T+L ++L+NN+ +G I
Sbjct: 447 LKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEI 506
Query: 141 PATWSQLSNLKHLDLSSNNLTGRIPMQL 168
P +L NL L LS+N+ +G IP +L
Sbjct: 507 PKWIGRLENLAILKLSNNSFSGNIPAEL 534
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 51/90 (56%)
Query: 80 SLTLGSNGFSGKISPSITKLKFLASLELQDNDLSGTLPDFLGSMTHLQSLNLANNKFSGS 139
+L L N +G+I ++ L + L +N L+G +P ++G + +L L L+NN FSG+
Sbjct: 470 TLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGN 529
Query: 140 IPATWSQLSNLKHLDLSSNNLTGRIPMQLF 169
IPA +L LDL++N G IP +F
Sbjct: 530 IPAELGDCRSLIWLDLNTNLFNGTIPAAMF 559
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 64/116 (55%), Gaps = 5/116 (4%)
Query: 53 QFTDWNDHFVSPCFSWSHVTCRNGNVISLTLGSNGFSGKISPSITKLKFLASLELQDNDL 112
Q D + + +S FS + TC +++++ SN F G I P LK L L L +N
Sbjct: 226 QHLDISGNKLSGDFSRAISTCTELKLLNIS--SNQFVGPIPP--LPLKSLQYLSLAENKF 281
Query: 113 SGTLPDFL-GSMTHLQSLNLANNKFSGSIPATWSQLSNLKHLDLSSNNLTGRIPMQ 167
+G +PDFL G+ L L+L+ N F G++P + S L+ L LSSNN +G +PM
Sbjct: 282 TGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMD 337
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 55/109 (50%), Gaps = 9/109 (8%)
Query: 76 GNVISLTLGSNGFSGKISPSITKLKFLASLELQDNDLSGTLPDFLGSMTHLQSLNLANNK 135
G + L + N SG + +++ L L++ N+ S +P FLG + LQ L+++ NK
Sbjct: 178 GELKHLAISGNKISGDVD--VSRCVNLEFLDVSSNNFSTGIP-FLGDCSALQHLDISGNK 234
Query: 136 FSGSIPATWSQLSNLKHLDLSSNNLTGRIP------MQLFSVATFNFTG 178
SG S + LK L++SSN G IP +Q S+A FTG
Sbjct: 235 LSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTG 283
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 78 VISLTLGSNGFSGKISPSITKLKFLASLELQDNDLSGTLP-DFLGSMTHLQSLNLANNKF 136
+ L L N F G + P L SL L N+ SG LP D L M L+ L+L+ N+F
Sbjct: 296 LTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEF 355
Query: 137 SGSIPATWSQLS-NLKHLDLSSNNLTGRI 164
SG +P + + LS +L LDLSSNN +G I
Sbjct: 356 SGELPESLTNLSASLLTLDLSSNNFSGPI 384
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 73 CRNGNVISLTLGSNGFSGKISPSITKLKFLASLELQDNDLSGTLPDFLGSMTHLQSLNLA 132
C N N ISL+ +N +G+I I +L+ LA L+L +N SG +P LG L L+L
Sbjct: 489 CTNLNWISLS--NNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLN 546
Query: 133 NNKFSGSIPA 142
N F+G+IPA
Sbjct: 547 TNLFNGTIPA 556
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 69/137 (50%), Gaps = 33/137 (24%)
Query: 56 DWNDHFVSPCFSWSHVTCRNGNVISLTLGSN----GFSG-------------------KI 92
DW+ + +PC ++ VTCR+ V S+ L S GFS I
Sbjct: 32 DWSSN-KNPC-TFDGVTCRDDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSNSHI 89
Query: 93 SPSITKLK---FLASLELQDNDLSGTLPDF--LGSMTHLQSLNLANN--KFSGSIPATWS 145
+ S++ K L SL+L N LSG + LGS + L+ LN+++N F G +
Sbjct: 90 NGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGL- 148
Query: 146 QLSNLKHLDLSSNNLTG 162
+L++L+ LDLS+N+++G
Sbjct: 149 KLNSLEVLDLSANSISG 165
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 69/117 (58%), Gaps = 10/117 (8%)
Query: 252 KVSLTQLRRFSCRELQLATDNFSE------SNIIGQGGFGKVYKGVLSDNTKVAVKRLQ- 304
+VS T+ FS EL+ T+NF E N +G+GGFG VYKG + +NT VAVK+L
Sbjct: 6 EVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAA 64
Query: 305 --DYYSPGGEAAFQREVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRL 359
D + + F +E+ +++ H+NL++L+G+ + + LVY +M N S+ RL
Sbjct: 65 MVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL 121
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 69/117 (58%), Gaps = 10/117 (8%)
Query: 252 KVSLTQLRRFSCRELQLATDNFSE------SNIIGQGGFGKVYKGVLSDNTKVAVKRLQ- 304
+VS T+ FS EL+ T+NF E N +G+GGFG VYKG + +NT VAVK+L
Sbjct: 6 EVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAA 64
Query: 305 --DYYSPGGEAAFQREVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRL 359
D + + F +E+ +++ H+NL++L+G+ + + LVY +M N S+ RL
Sbjct: 65 MVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL 121
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 68/116 (58%), Gaps = 10/116 (8%)
Query: 253 VSLTQLRRFSCRELQLATDNFSE------SNIIGQGGFGKVYKGVLSDNTKVAVKRLQ-- 304
VS T+ FS EL+ T+NF E N +G+GGFG VYKG + +NT VAVK+L
Sbjct: 1 VSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAM 59
Query: 305 -DYYSPGGEAAFQREVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRL 359
D + + F +E+ +++ H+NL++L+G+ + + LVY +M N S+ RL
Sbjct: 60 VDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL 115
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 63/113 (55%), Gaps = 10/113 (8%)
Query: 256 TQLRRFSCRELQLATDNFSE------SNIIGQGGFGKVYKGVLSDNTKVAVKRLQ---DY 306
T+ FS EL+ T+NF E N G+GGFG VYKG + +NT VAVK+L D
Sbjct: 1 TRFHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDI 59
Query: 307 YSPGGEAAFQREVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRL 359
+ + F +E+ + + H+NL++L+G+ + + LVY + N S+ RL
Sbjct: 60 TTEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRL 112
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%)
Query: 84 GSNGFSGKISPSITKLKFLASLELQDNDLSGTLPDFLGSMTHLQSLNLANNKFSGSIPAT 143
G N G I P+I KL L L + ++SG +PDFL + L +L+ + N SG++P +
Sbjct: 85 GINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPS 144
Query: 144 WSQLSNLKHLDLSSNNLTGRIP 165
S L NL + N ++G IP
Sbjct: 145 ISSLPNLVGITFDGNRISGAIP 166
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Query: 78 VISLTLGSNGFSGKISPSITKLKFLASLELQDNDLSGTLPDFLGSMTHL-QSLNLANNKF 136
+++L N SG + PSI+ L L + N +SG +PD GS + L S+ ++ N+
Sbjct: 127 LVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRL 186
Query: 137 SGSIPATWSQLSNLKHLDLSSNNLTG 162
+G IP T++ L NL +DLS N L G
Sbjct: 187 TGKIPPTFANL-NLAFVDLSRNMLEG 211
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 89 SGKISPSITKLKFLASLELQDNDLSGTLPDFLGSMTHLQSLNLANNKFSGSIPATWSQLS 148
SG I ++++K L +L+ N LSGTLP + S+ +L + N+ SG+IP ++ S
Sbjct: 114 SGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFS 173
Query: 149 NL-KHLDLSSNNLTGRIP 165
L + +S N LTG+IP
Sbjct: 174 KLFTSMTISRNRLTGKIP 191
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 60/136 (44%), Gaps = 30/136 (22%)
Query: 80 SLTLGSNGFSGKISPSITKLKFLASLELQDNDLSGTLPDFLGSMTHLQSLNLA------- 132
S+T+ N +GKI P+ L LA ++L N L G GS + Q ++LA
Sbjct: 178 SMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFD 236
Query: 133 ----------------NNKFSGSIPATWSQLSNLKHLDLSSNNLTGRIP----MQLFSVA 172
NN+ G++P +QL L L++S NNL G IP +Q F V+
Sbjct: 237 LGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVS 296
Query: 173 TFNFTGTHLICGSSLE 188
+ +CGS L
Sbjct: 297 A--YANNKCLCGSPLP 310
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 92 ISPSITKLKFLASLELQD-NDLSGTLPDFLGSMTHLQSLNLANNKFSGSIPATWSQLSNL 150
I S+ L +L L + N+L G +P + +T L L + + SG+IP SQ+ L
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 151 KHLDLSSNNLTGRIPMQLFSVATF 174
LD S N L+G +P + S+
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNL 151
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 77 NVISLTLGSNGFSGKISPSITKLKFLASLELQDNDLSGTLPDFLGSMTHLQSLNLANNK 135
N+ L L +N G + +T+LKFL SL + N+L G +P G++ ANNK
Sbjct: 245 NLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNK 302
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 279 IGQGGFGKVYKGVL-SDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 337
IG+G FG+V+ G L +DNT VAVK ++ P +A F +E ++ H N+++LIG C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 338 TTSSERILVYPFMQN 352
T +V +Q
Sbjct: 182 TQKQPIYIVMELVQG 196
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 279 IGQGGFGKVYKGVL-SDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 337
IG+G FG+V+ G L +DNT VAVK ++ P +A F +E ++ H N+++LIG C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 338 TTSSERILVYPFMQN 352
T +V +Q
Sbjct: 182 TQKQPIYIVMELVQG 196
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Query: 267 QLATDNFSESNIIGQGGFGKVYK----GVLSDN--TKVAVKRLQDYYSPGGEAAFQREVH 320
+ +N IG+G FG+V++ G+L T VAVK L++ S +A FQRE
Sbjct: 43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAA 102
Query: 321 LISVAIHKNLLQLIGYCTTSSERILVYPFM 350
L++ + N+++L+G C L++ +M
Sbjct: 103 LMAEFDNPNIVKLLGVCAVGKPMCLLFEYM 132
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 55/99 (55%), Gaps = 8/99 (8%)
Query: 279 IGQGGFGKVY----KGVLSDNTK--VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQ 332
+G+G FGKV+ +L + K VAVK L++ S FQRE L+++ H+++++
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA-SESARQDFQREAELLTMLQHQHIVR 84
Query: 333 LIGYCTTSSERILVYPFMQNLSVAYRLRVSHKIYTKIIS 371
G CT ++V+ +M++ + LR SH K+++
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDLNRFLR-SHGPDAKLLA 122
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 55/99 (55%), Gaps = 8/99 (8%)
Query: 279 IGQGGFGKVY----KGVLSDNTK--VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQ 332
+G+G FGKV+ +L + K VAVK L++ S FQRE L+++ H+++++
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA-SESARQDFQREAELLTMLQHQHIVR 78
Query: 333 LIGYCTTSSERILVYPFMQNLSVAYRLRVSHKIYTKIIS 371
G CT ++V+ +M++ + LR SH K+++
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDLNRFLR-SHGPDAKLLA 116
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 55/99 (55%), Gaps = 8/99 (8%)
Query: 279 IGQGGFGKVY----KGVLSDNTK--VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQ 332
+G+G FGKV+ +L + K VAVK L++ S FQRE L+++ H+++++
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA-SESARQDFQREAELLTMLQHQHIVR 107
Query: 333 LIGYCTTSSERILVYPFMQNLSVAYRLRVSHKIYTKIIS 371
G CT ++V+ +M++ + LR SH K+++
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFLR-SHGPDAKLLA 145
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 267 QLATDNFSESNIIGQGGFGKVYKGVLSDNTK----VAVKRLQDYYSPGGEAAFQREVHLI 322
+L N S ++G G FG+V G L +K VA+K L+ Y+ F E ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 323 SVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRVSHKIYTKI 369
H N+++L G T S ++V +M+N S+ LR +T I
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 147
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 267 QLATDNFSESNIIGQGGFGKVYKGVLSDNTK----VAVKRLQDYYSPGGEAAFQREVHLI 322
+L N S ++G G FG+V G L +K VA+K L+ Y+ F E ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 323 SVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRVSHKIYTKI 369
H N+++L G T S ++V +M+N S+ LR +T I
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 147
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 6/103 (5%)
Query: 279 IGQGGFGKVYKGVLS------DNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQ 332
+G G FG+VY+G +S +VAVK L + YS E F E +IS H+N+++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 333 LIGYCTTSSERILVYPFMQNLSVAYRLRVSHKIYTKIISLSSL 375
IG S R ++ M + LR + ++ SL+ L
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 155
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 267 QLATDNFSESNIIGQGGFGKVYKGVLSDNTK----VAVKRLQDYYSPGGEAAFQREVHLI 322
+L N S ++G G FG+V G L +K VA+K L+ Y+ F E ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 323 SVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRVSHKIYTKI 369
H N+++L G T S ++V +M+N S+ LR +T I
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 147
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 267 QLATDNFSESNIIGQGGFGKVYKGVLSDNTK----VAVKRLQDYYSPGGEAAFQREVHLI 322
+L N S ++G G FG+V G L +K VA+K L+ Y+ F E ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 323 SVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRVSHKIYTKI 369
H N+++L G T S ++V +M+N S+ LR +T I
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 147
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 267 QLATDNFSESNIIGQGGFGKVYKGVLSDNTK----VAVKRLQDYYSPGGEAAFQREVHLI 322
+L N S ++G G FG+V G L +K VA+K L+ Y+ F E ++
Sbjct: 29 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 88
Query: 323 SVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRVSHKIYTKI 369
H N+++L G T S ++V +M+N S+ LR +T I
Sbjct: 89 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 135
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 267 QLATDNFSESNIIGQGGFGKVYKGVLSDNTK----VAVKRLQDYYSPGGEAAFQREVHLI 322
+L N S ++G G FG+V G L +K VA+K L+ Y+ F E ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 323 SVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRVSHKIYTKI 369
H N+++L G T S ++V +M+N S+ LR +T I
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 147
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 267 QLATDNFSESNIIGQGGFGKVYKGVLSDNTK----VAVKRLQDYYSPGGEAAFQREVHLI 322
+L N S ++G G FG+V G L +K VA+K L+ Y+ F E ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 323 SVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRVSHKIYTKI 369
H N+++L G T S ++V +M+N S+ LR +T I
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 147
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 267 QLATDNFSESNIIGQGGFGKVYKGVLSDNTK----VAVKRLQDYYSPGGEAAFQREVHLI 322
+L N S ++G G FG+V G L +K VA+K L+ Y+ F E ++
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 71
Query: 323 SVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRVSHKIYTKI 369
H N+++L G T S ++V +M+N S+ LR +T I
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 118
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 59/116 (50%), Gaps = 7/116 (6%)
Query: 258 LRRFSCRELQLATDNFSESNIIGQGGFGKVYKGVLSDNTK----VAVKRLQDYYSPGGEA 313
+R F+ +E+ ++ E +IG G FG+V +G L K VA+K L+ Y+
Sbjct: 6 VREFA-KEIDVSYVKIEE--VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRR 62
Query: 314 AFQREVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRVSHKIYTKI 369
F E ++ H N+++L G T S +++ FM+N ++ LR++ +T I
Sbjct: 63 EFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVI 118
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 267 QLATDNFSESNIIGQGGFGKVYKGVLSDNTK----VAVKRLQDYYSPGGEAAFQREVHLI 322
+L N S ++G G FG+V G L +K VA+K L+ Y+ F E ++
Sbjct: 39 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 98
Query: 323 SVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRVSHKIYTKI 369
H N+++L G T S ++V +M+N S+ LR +T I
Sbjct: 99 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 145
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 267 QLATDNFSESNIIGQGGFGKVYKGVLSDNTK----VAVKRLQDYYSPGGEAAFQREVHLI 322
+L N S ++G G FG+V G L +K VA+K L+ Y+ F E ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 323 SVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRVSHKIYTKI 369
H N+++L G T S ++V +M+N S+ LR +T I
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 147
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 276 SNIIGQGGFGKVYKGVLSDNTK----VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 331
+IG G FG+V +G L K VA+K L+ Y+ F E ++ H N++
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 78
Query: 332 QLIGYCTTSSERILVYPFMQNLSVAYRLRVSHKIYTKI 369
+L G T S +++ FM+N ++ LR++ +T I
Sbjct: 79 RLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVI 116
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Query: 279 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYCT 338
IG G FG V+ G + KVA+K +++ E F E ++ H L+QL G C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIRE--GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 339 TSSERILVYPFMQNLSVAYRLRVSHKIYT 367
+ LV+ FM++ ++ LR ++
Sbjct: 73 EQAPICLVFEFMEHGCLSDYLRTQRGLFA 101
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Query: 279 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYCT 338
IG G FG V+ G + KVA+K +++ E F E ++ H L+QL G C
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIRE--GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 70
Query: 339 TSSERILVYPFMQNLSVAYRLRVSHKIYT 367
+ LV+ FM++ ++ LR ++
Sbjct: 71 EQAPICLVFEFMEHGCLSDYLRTQRGLFA 99
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Query: 279 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYCT 338
IG G FG V+ G + KVA+K +++ E F E ++ H L+QL G C
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIRE--GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 75
Query: 339 TSSERILVYPFMQNLSVAYRLRVSHKIYT 367
+ LV+ FM++ ++ LR ++
Sbjct: 76 EQAPICLVFEFMEHGCLSDYLRTQRGLFA 104
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 274 SESNIIGQGGFGKVYKGVLSDNT-----KVAVKRLQDYYSPGGEAAFQREVHLISVAIHK 328
+ +IG G FG+VYKG+L ++ VA+K L+ Y+ F E ++ H
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 329 NLLQLIGYCTTSSERILVYPFMQNLSVAYRLR 360
N+++L G + +++ +M+N ++ LR
Sbjct: 107 NIIRLEGVISKYKPMMIITEYMENGALDKFLR 138
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Query: 279 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYCT 338
IG G FG V+ G + KVA+K +++ E F E ++ H L+QL G C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIRE--GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 339 TSSERILVYPFMQNLSVAYRLRVSHKIYT 367
+ LV+ FM++ ++ LR ++
Sbjct: 73 EQAPICLVFEFMEHGCLSDYLRTQRGLFA 101
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 268 LATDNFSESNIIGQGGFGKVYKGV-LSDNTKV----AVKRLQDYYSPGGEAAFQREVHLI 322
L F + ++G G FG VYKG+ + + KV A+K L++ SP E +++
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 323 SVAIHKNLLQLIGYCTTSSERIL--VYPF 349
+ + ++ +L+G C TS+ +++ + PF
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQLITQLMPF 100
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Query: 268 LATDNFSESNIIGQGGFGKVYKGV-LSDNTKV----AVKRLQDYYSPGGEAAFQREVHLI 322
L F + ++G G FG VYKG+ + + KV A+K L++ SP E +++
Sbjct: 16 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 75
Query: 323 SVAIHKNLLQLIGYCTTSSERILV 346
+ + ++ +L+G C TS+ ++++
Sbjct: 76 ASVDNPHVCRLLGICLTSTVQLIM 99
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Query: 268 LATDNFSESNIIGQGGFGKVYKGV-LSDNTKV----AVKRLQDYYSPGGEAAFQREVHLI 322
L F + ++G G FG VYKG+ + + KV A+K L++ SP E +++
Sbjct: 13 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 72
Query: 323 SVAIHKNLLQLIGYCTTSSERILV 346
+ + ++ +L+G C TS+ ++++
Sbjct: 73 ASVDNPHVCRLLGICLTSTVQLIM 96
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Query: 268 LATDNFSESNIIGQGGFGKVYKGV-LSDNTKV----AVKRLQDYYSPGGEAAFQREVHLI 322
L F + ++G G FG VYKG+ + + KV A+K L++ SP E +++
Sbjct: 15 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 74
Query: 323 SVAIHKNLLQLIGYCTTSSERILV 346
+ + ++ +L+G C TS+ ++++
Sbjct: 75 ASVDNPHVCRLLGICLTSTVQLIM 98
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Query: 268 LATDNFSESNIIGQGGFGKVYKGV-LSDNTKV----AVKRLQDYYSPGGEAAFQREVHLI 322
L F + ++G G FG VYKG+ + + KV A+K L++ SP E +++
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 323 SVAIHKNLLQLIGYCTTSSERILV 346
+ + ++ +L+G C TS+ ++++
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQLIM 95
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Query: 268 LATDNFSESNIIGQGGFGKVYKGV-LSDNTKV----AVKRLQDYYSPGGEAAFQREVHLI 322
L F + ++G G FG VYKG+ + + KV A+K L++ SP E +++
Sbjct: 16 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 75
Query: 323 SVAIHKNLLQLIGYCTTSSERILV 346
+ + ++ +L+G C TS+ ++++
Sbjct: 76 ASVDNPHVCRLLGICLTSTVQLIM 99
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 268 LATDNFSESNIIGQGGFGKVYKGV-LSDNTKV----AVKRLQDYYSPGGEAAFQREVHLI 322
L F + ++G G FG VYKG+ + + KV A+K L++ SP E +++
Sbjct: 22 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 81
Query: 323 SVAIHKNLLQLIGYCTTSSERIL--VYPF 349
+ + ++ +L+G C TS+ +++ + PF
Sbjct: 82 ASVDNPHVCRLLGICLTSTVQLITQLMPF 110
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 268 LATDNFSESNIIGQGGFGKVYKGV-LSDNTKV----AVKRLQDYYSPGGEAAFQREVHLI 322
L F + ++G G FG VYKG+ + + KV A+K L++ SP E +++
Sbjct: 6 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 65
Query: 323 SVAIHKNLLQLIGYCTTSSERIL--VYPF 349
+ + ++ +L+G C TS+ +++ + PF
Sbjct: 66 ASVDNPHVCRLLGICLTSTVQLITQLMPF 94
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Query: 268 LATDNFSESNIIGQGGFGKVYKGV-LSDNTKV----AVKRLQDYYSPGGEAAFQREVHLI 322
L F + ++G G FG VYKG+ + + KV A+K L++ SP E +++
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 73
Query: 323 SVAIHKNLLQLIGYCTTSSERILV 346
+ + ++ +L+G C TS+ ++++
Sbjct: 74 ASVDNPHVCRLLGICLTSTVQLIM 97
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Query: 268 LATDNFSESNIIGQGGFGKVYKGV-LSDNTKV----AVKRLQDYYSPGGEAAFQREVHLI 322
L F + ++G G FG VYKG+ + + KV A+K L++ SP E +++
Sbjct: 13 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 72
Query: 323 SVAIHKNLLQLIGYCTTSSERILV 346
+ + ++ +L+G C TS+ ++++
Sbjct: 73 ASVDNPHVCRLLGICLTSTVQLIM 96
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 268 LATDNFSESNIIGQGGFGKVYKGV-LSDNTKV----AVKRLQDYYSPGGEAAFQREVHLI 322
L F + ++G G FG VYKG+ + + KV A+K L++ SP E +++
Sbjct: 9 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 68
Query: 323 SVAIHKNLLQLIGYCTTSSERIL--VYPF 349
+ + ++ +L+G C TS+ +++ + PF
Sbjct: 69 ASVDNPHVCRLLGICLTSTVQLITQLMPF 97
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 268 LATDNFSESNIIGQGGFGKVYKGV-LSDNTKV----AVKRLQDYYSPGGEAAFQREVHLI 322
L F + ++G G FG VYKG+ + + KV A+K L++ SP E +++
Sbjct: 15 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 74
Query: 323 SVAIHKNLLQLIGYCTTSSERIL--VYPF 349
+ + ++ +L+G C TS+ +++ + PF
Sbjct: 75 ASVDNPHVCRLLGICLTSTVQLITQLMPF 103
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 268 LATDNFSESNIIGQGGFGKVYKGV-LSDNTKV----AVKRLQDYYSPGGEAAFQREVHLI 322
L F + ++G G FG VYKG+ + + KV A+K L++ SP E +++
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 73
Query: 323 SVAIHKNLLQLIGYCTTSSERIL--VYPF 349
+ + ++ +L+G C TS+ +++ + PF
Sbjct: 74 ASVDNPHVCRLLGICLTSTVQLITQLMPF 102
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Query: 268 LATDNFSESNIIGQGGFGKVYKGV-LSDNTKV----AVKRLQDYYSPGGEAAFQREVHLI 322
L F + ++G G FG VYKG+ + + KV A+K L++ SP E +++
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 73
Query: 323 SVAIHKNLLQLIGYCTTSSERILV 346
+ + ++ +L+G C TS+ ++++
Sbjct: 74 ASVDNPHVCRLLGICLTSTVQLIM 97
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 268 LATDNFSESNIIGQGGFGKVYKGV-LSDNTKV----AVKRLQDYYSPGGEAAFQREVHLI 322
L F + ++G G FG VYKG+ + + KV A+K L++ SP E +++
Sbjct: 18 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 77
Query: 323 SVAIHKNLLQLIGYCTTSSERIL--VYPF 349
+ + ++ +L+G C TS+ +++ + PF
Sbjct: 78 ASVDNPHVCRLLGICLTSTVQLITQLMPF 106
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 268 LATDNFSESNIIGQGGFGKVYKGV-LSDNTKV----AVKRLQDYYSPGGEAAFQREVHLI 322
L F + ++G G FG VYKG+ + + KV A+K L++ SP E +++
Sbjct: 15 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 74
Query: 323 SVAIHKNLLQLIGYCTTSSERIL--VYPF 349
+ + ++ +L+G C TS+ +++ + PF
Sbjct: 75 ASVDNPHVCRLLGICLTSTVQLITQLMPF 103
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Query: 268 LATDNFSESNIIGQGGFGKVYKGV-LSDNTKV----AVKRLQDYYSPGGEAAFQREVHLI 322
L F + ++G G FG VYKG+ + + KV A+K L++ SP E +++
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 73
Query: 323 SVAIHKNLLQLIGYCTTSSERILV 346
+ + ++ +L+G C TS+ ++++
Sbjct: 74 ASVDNPHVCRLLGICLTSTVQLIM 97
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Query: 279 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYCT 338
IG G FG V+ G + KVA+K +++ E F E ++ H L+QL G C
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKE--GSMSEDDFIEEAEVMMKLSHPKLVQLYGVCL 92
Query: 339 TSSERILVYPFMQNLSVAYRLRVSHKIYT 367
+ LV+ FM++ ++ LR ++
Sbjct: 93 EQAPICLVFEFMEHGCLSDYLRTQRGLFA 121
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 4/107 (3%)
Query: 267 QLATDNFSESNIIGQGGFGKVYKGVLSDNTK----VAVKRLQDYYSPGGEAAFQREVHLI 322
+L N S ++G G FG+V G L +K VA+K L+ Y+ F E ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 323 SVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRVSHKIYTKI 369
H N+++L G T S ++V M+N S+ LR +T I
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI 147
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 268 LATDNFSESNIIGQGGFGKVYKGV-LSDNTKV----AVKRLQDYYSPGGEAAFQREVHLI 322
L F + ++G G FG VYKG+ + + KV A+K L++ SP E +++
Sbjct: 15 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 74
Query: 323 SVAIHKNLLQLIGYCTTSSERIL--VYPF 349
+ + ++ +L+G C TS+ +++ + PF
Sbjct: 75 ASVDNPHVCRLLGICLTSTVQLITQLMPF 103
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 268 LATDNFSESNIIGQGGFGKVYKGV-LSDNTKV----AVKRLQDYYSPGGEAAFQREVHLI 322
L F + ++G G FG VYKG+ + + KV A+K L++ SP E +++
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 323 SVAIHKNLLQLIGYCTTSSERIL--VYPF 349
+ + ++ +L+G C TS+ +++ + PF
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQLITQLMPF 100
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 268 LATDNFSESNIIGQGGFGKVYKGV-LSDNTKV----AVKRLQDYYSPGGEAAFQREVHLI 322
L F + ++G G FG VYKG+ + + KV A+K L++ SP E +++
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 323 SVAIHKNLLQLIGYCTTSSERIL--VYPF 349
+ + ++ +L+G C TS+ +++ + PF
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQLITQLMPF 100
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 268 LATDNFSESNIIGQGGFGKVYKGV-LSDNTKV----AVKRLQDYYSPGGEAAFQREVHLI 322
L F + ++G G FG VYKG+ + + KV A+K L++ SP E +++
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 323 SVAIHKNLLQLIGYCTTSSERIL--VYPF 349
+ + ++ +L+G C TS+ +++ + PF
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQLITQLMPF 100
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 268 LATDNFSESNIIGQGGFGKVYKGV-LSDNTKV----AVKRLQDYYSPGGEAAFQREVHLI 322
L F + ++G G FG VYKG+ + + KV A+K L++ SP E +++
Sbjct: 19 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 78
Query: 323 SVAIHKNLLQLIGYCTTSSERIL--VYPF 349
+ + ++ +L+G C TS+ +++ + PF
Sbjct: 79 ASVDNPHVCRLLGICLTSTVQLITQLMPF 107
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 268 LATDNFSESNIIGQGGFGKVYKGV-LSDNTKV----AVKRLQDYYSPGGEAAFQREVHLI 322
L F + ++G G FG VYKG+ + + KV A+K L++ SP E +++
Sbjct: 19 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 78
Query: 323 SVAIHKNLLQLIGYCTTSSERIL--VYPF 349
+ + ++ +L+G C TS+ +++ + PF
Sbjct: 79 ASVDNPHVCRLLGICLTSTVQLITQLMPF 107
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 268 LATDNFSESNIIGQGGFGKVYKGV-LSDNTKV----AVKRLQDYYSPGGEAAFQREVHLI 322
L F + ++G G FG VYKG+ + + KV A+K L++ SP E +++
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 73
Query: 323 SVAIHKNLLQLIGYCTTSSERIL--VYPF 349
+ + ++ +L+G C TS+ +++ + PF
Sbjct: 74 ASVDNPHVCRLLGICLTSTVQLITQLMPF 102
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 268 LATDNFSESNIIGQGGFGKVYKGV-LSDNTKV----AVKRLQDYYSPGGEAAFQREVHLI 322
L F + ++G G FG VYKG+ + + KV A+K L++ SP E +++
Sbjct: 37 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 96
Query: 323 SVAIHKNLLQLIGYCTTSSERIL--VYPF 349
+ + ++ +L+G C TS+ +++ + PF
Sbjct: 97 ASVDNPHVCRLLGICLTSTVQLITQLMPF 125
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 276 SNIIGQGGFGKVYKGVLSDNTK----VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 331
+IG G FG+V G L K VA+K L+ Y+ F E ++ H N++
Sbjct: 38 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 97
Query: 332 QLIGYCTTSSERILVYPFMQNLSVAYRLRVSHKIYTKI 369
L G T S+ +++ FM+N S+ LR + +T I
Sbjct: 98 HLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVI 135
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 4/107 (3%)
Query: 267 QLATDNFSESNIIGQGGFGKVYKGVLSDNTK----VAVKRLQDYYSPGGEAAFQREVHLI 322
+L N S ++G G FG+V G L +K VA+K L+ Y+ F E ++
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 71
Query: 323 SVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRVSHKIYTKI 369
H N+++L G T S ++V M+N S+ LR +T I
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI 118
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 4/107 (3%)
Query: 267 QLATDNFSESNIIGQGGFGKVYKGVLSDNTK----VAVKRLQDYYSPGGEAAFQREVHLI 322
+L N S ++G G FG+V G L +K VA+K L+ Y+ F E ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 323 SVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRVSHKIYTKI 369
H N+++L G T S ++V M+N S+ LR +T I
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI 147
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
Query: 251 CKVSLTQLRRFSCRELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPG 310
C S Q + + ++ ++ +GQG FG+V+ G + T+VA+K L+ PG
Sbjct: 165 CPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK----PG 220
Query: 311 G--EAAFQREVHLISVAIHKNLLQLIGYCTTSSERILV 346
AF +E ++ H+ L+QL Y S E I +
Sbjct: 221 NMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYI 256
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 43/93 (46%), Gaps = 3/93 (3%)
Query: 247 GEDDCKVSLTQLRRFSCRELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQ-D 305
G +D T RR S + ++ + IG G FG VYKG + VAVK L
Sbjct: 12 GSEDRNRMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVT 69
Query: 306 YYSPGGEAAFQREVHLISVAIHKNLLQLIGYCT 338
+P AF+ EV ++ H N+L +GY T
Sbjct: 70 APTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 102
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 276 SNIIGQGGFGKVYKGVLSDNTK----VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 331
+IG G FG+V G L K VA+K L+ Y+ F E ++ H N++
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 71
Query: 332 QLIGYCTTSSERILVYPFMQNLSVAYRLRVSHKIYTKI 369
L G T S+ +++ FM+N S+ LR + +T I
Sbjct: 72 HLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVI 109
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
Query: 251 CKVSLTQLRRFSCRELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPG 310
C S Q + + ++ ++ +GQG FG+V+ G + T+VA+K L+ PG
Sbjct: 164 CPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK----PG 219
Query: 311 --GEAAFQREVHLISVAIHKNLLQLIGYCTTSSERILV 346
AF +E ++ H+ L+QL Y S E I +
Sbjct: 220 TMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYI 255
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 43/93 (46%), Gaps = 3/93 (3%)
Query: 247 GEDDCKVSLTQLRRFSCRELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQ-D 305
G +D T RR S + ++ + IG G FG VYKG + VAVK L
Sbjct: 12 GSEDRNRMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVT 69
Query: 306 YYSPGGEAAFQREVHLISVAIHKNLLQLIGYCT 338
+P AF+ EV ++ H N+L +GY T
Sbjct: 70 APTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 102
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
Query: 251 CKVSLTQLRRFSCRELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPG 310
C S Q + + ++ ++ +GQG FG+V+ G + T+VA+K L+ PG
Sbjct: 164 CPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK----PG 219
Query: 311 --GEAAFQREVHLISVAIHKNLLQLIGYCTTSSERILV 346
AF +E ++ H+ L+QL Y S E I +
Sbjct: 220 TMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYI 255
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Query: 261 FSCRELQLATDNFSESNIIGQGGFGKVYKGVLSDNT-KVAVKRLQDYYSPGGEAAFQREV 319
S + ++ + + + +G G FG+VY+GV + VAVK L++ E F +E
Sbjct: 1 MSLDKWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEA 58
Query: 320 HLISVAIHKNLLQLIGYCTTSSERILVYPFM 350
++ H NL+QL+G CT ++ FM
Sbjct: 59 AVMKEIKHPNLVQLLGVCTREPPFYIITEFM 89
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
Query: 251 CKVSLTQLRRFSCRELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPG 310
C S Q + + ++ ++ +GQG FG+V+ G + T+VA+K L+ PG
Sbjct: 164 CPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK----PG 219
Query: 311 --GEAAFQREVHLISVAIHKNLLQLIGYCTTSSERILV 346
AF +E ++ H+ L+QL Y S E I +
Sbjct: 220 TMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYI 255
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
Query: 251 CKVSLTQLRRFSCRELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPG 310
C S Q + + ++ ++ +GQG FG+V+ G + T+VA+K L+ PG
Sbjct: 247 CPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK----PG 302
Query: 311 --GEAAFQREVHLISVAIHKNLLQLIGYCTTSSERILV 346
AF +E ++ H+ L+QL Y S E I +
Sbjct: 303 TMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYI 338
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 279 IGQGGFGKVYKGVL------SDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQ 332
+G+G FGKV+ D VAVK L+D S F RE L++ H+++++
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA-SDNARKDFHREAELLTNLQHEHIVK 79
Query: 333 LIGYCTTSSERILVYPFMQN 352
G C I+V+ +M++
Sbjct: 80 FYGVCVEGDPLIMVFEYMKH 99
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Query: 279 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYCT 338
IG G FG V+ G + KVA+K +++ E F E ++ H L+QL G C
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIRE--GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 73
Query: 339 TSSERILVYPFMQNLSVAYRLRVSHKIYT 367
+ LV FM++ ++ LR ++
Sbjct: 74 EQAPICLVTEFMEHGCLSDYLRTQRGLFA 102
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Query: 279 IGQGGFGKVYKG------VLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQ 332
+G+G FGKV+ D VAVK L+D + FQRE L++ H+++++
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDP-TLAARKDFQREAELLTNLQHEHIVK 81
Query: 333 LIGYCTTSSERILVYPFMQN 352
G C I+V+ +M++
Sbjct: 82 FYGVCGDGDPLIMVFEYMKH 101
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 268 LATDNFSESNIIGQGGFGKVYKGVLSDNTK-----VAVKRLQDYYSPGGEAAFQREVHLI 322
L ++G G FG VYKG+ + VA+K L + P F E ++
Sbjct: 35 LKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIM 94
Query: 323 SVAIHKNLLQLIGYCTTSS 341
+ H +L++L+G C + +
Sbjct: 95 ASMDHPHLVRLLGVCLSPT 113
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 276 SNIIGQGGFGKVYKGVLSDN----TKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 331
+ +IG+G FG VY G L DN AVK L G + F E ++ H N+L
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 332 QLIGYCTTSS-ERILVYPFMQN 352
L+G C S ++V P+M++
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKH 117
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 268 LATDNFSESNIIGQGGFGKVYKGVLSDNTK-----VAVKRLQDYYSPGGEAAFQREVHLI 322
L ++G G FG VYKG+ + VA+K L + P F E ++
Sbjct: 12 LKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIM 71
Query: 323 SVAIHKNLLQLIGYCTTSS 341
+ H +L++L+G C + +
Sbjct: 72 ASMDHPHLVRLLGVCLSPT 90
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 276 SNIIGQGGFGKVYKGVLSDN----TKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 331
+ +IG+G FG VY G L DN AVK L G + F E ++ H N+L
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 332 QLIGYCTTSS-ERILVYPFMQN 352
L+G C S ++V P+M++
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKH 115
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 276 SNIIGQGGFGKVYKGVLSDN----TKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 331
+ +IG+G FG VY G L DN AVK L G + F E ++ H N+L
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 332 QLIGYCTTSS-ERILVYPFMQN 352
L+G C S ++V P+M++
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKH 114
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 276 SNIIGQGGFGKVYKGVLSDN----TKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 331
+ +IG+G FG VY G L DN AVK L G + F E ++ H N+L
Sbjct: 54 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 113
Query: 332 QLIGYCTTSS-ERILVYPFMQN 352
L+G C S ++V P+M++
Sbjct: 114 SLLGICLRSEGSPLVVLPYMKH 135
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 6/103 (5%)
Query: 279 IGQGGFGKVYKGVLS------DNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQ 332
+G G FG+VY+G +S +VAVK L + S E F E +IS H+N+++
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 333 LIGYCTTSSERILVYPFMQNLSVAYRLRVSHKIYTKIISLSSL 375
IG S R ++ M + LR + ++ SL+ L
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAML 140
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 276 SNIIGQGGFGKVYKGVLSDN----TKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 331
+ +IG+G FG VY G L DN AVK L G + F E ++ H N+L
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 332 QLIGYCTTSS-ERILVYPFMQN 352
L+G C S ++V P+M++
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKH 116
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 279 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPG--GEAAFQREVHLISVAIHKNLLQLIGY 336
+GQG FG+V+ G + T+VA+K L+ PG AF +E ++ H+ L+QL Y
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLK----PGTMSPEAFLQEAQVMKKLRHEKLVQL--Y 76
Query: 337 CTTSSERILV 346
S E I +
Sbjct: 77 AVVSEEPIYI 86
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 6/103 (5%)
Query: 279 IGQGGFGKVYKGVLS------DNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQ 332
+G G FG+VY+G +S +VAVK L + S E F E +IS H+N+++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 333 LIGYCTTSSERILVYPFMQNLSVAYRLRVSHKIYTKIISLSSL 375
IG S R ++ M + LR + ++ SL+ L
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 141
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 6/103 (5%)
Query: 279 IGQGGFGKVYKGVLS------DNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQ 332
+G G FG+VY+G +S +VAVK L + S E F E +IS H+N+++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 333 LIGYCTTSSERILVYPFMQNLSVAYRLRVSHKIYTKIISLSSL 375
IG S R ++ M + LR + ++ SL+ L
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 155
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 276 SNIIGQGGFGKVYKGVLSDN----TKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 331
+ +IG+G FG VY G L DN AVK L G + F E ++ H N+L
Sbjct: 40 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 99
Query: 332 QLIGYCTTSS-ERILVYPFMQN 352
L+G C S ++V P+M++
Sbjct: 100 SLLGICLRSEGSPLVVLPYMKH 121
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 279 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPG--GEAAFQREVHLISVAIHKNLLQLIGY 336
+GQG FG+V+ G + T+VA+K L+ PG AF +E ++ H+ L+QL Y
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLK----PGTMSPEAFLQEAQVMKKLRHEKLVQL--Y 70
Query: 337 CTTSSERILV 346
S E I +
Sbjct: 71 AVVSEEPIYI 80
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 279 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPG--GEAAFQREVHLISVAIHKNLLQLIGY 336
+GQG FG+V+ G + T+VA+K L+ PG AF +E ++ H+ L+QL Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK----PGTMSPEAFLQEAQVMKKIRHEKLVQL--Y 79
Query: 337 CTTSSERILV 346
S E I +
Sbjct: 80 AVVSEEPIYI 89
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 276 SNIIGQGGFGKVYKGVLSDN----TKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 331
+ +IG+G FG VY G L DN AVK L G + F E ++ H N+L
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 332 QLIGYCTTSS-ERILVYPFMQN 352
L+G C S ++V P+M++
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKH 117
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 276 SNIIGQGGFGKVYKGVLSDN----TKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 331
+ +IG+G FG VY G L DN AVK L G + F E ++ H N+L
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 332 QLIGYCTTSS-ERILVYPFMQN 352
L+G C S ++V P+M++
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKH 116
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 262 SCRELQLATDNFSESNIIGQGGFGKVYKGVLSDNT-KVAVKRLQDYYSPGGEAAFQREVH 320
S + ++ + + + +G G +G+VY+GV + VAVK L++ E F +E
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAA 59
Query: 321 LISVAIHKNLLQLIGYCTTSSERILVYPFM 350
++ H NL+QL+G CT ++ FM
Sbjct: 60 VMKEIKHPNLVQLLGVCTREPPFYIIIEFM 89
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 276 SNIIGQGGFGKVYKGVLSDN----TKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 331
+ +IG+G FG VY G L DN AVK L G + F E ++ H N+L
Sbjct: 53 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 112
Query: 332 QLIGYCTTSS-ERILVYPFMQN 352
L+G C S ++V P+M++
Sbjct: 113 SLLGICLRSEGSPLVVLPYMKH 134
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 279 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPG--GEAAFQREVHLISVAIHKNLLQLIGY 336
+GQG FG+V+ G + T+VA+K L+ PG AF +E ++ H+ L+QL Y
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLK----PGTMSPEAFLQEAQVMKKLRHEKLVQL--Y 72
Query: 337 CTTSSERILV 346
S E I +
Sbjct: 73 AVVSEEPIYI 82
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 279 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPG--GEAAFQREVHLISVAIHKNLLQLIGY 336
+GQG FG+V+ G + T+VA+K L+ PG AF +E ++ H+ L+QL Y
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLK----PGTMSPEAFLQEAQVMKKLRHEKLVQL--Y 68
Query: 337 CTTSSERILV 346
S E I +
Sbjct: 69 AVVSEEPIYI 78
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 276 SNIIGQGGFGKVYKGVLSDN----TKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 331
+ +IG+G FG VY G L DN AVK L G + F E ++ H N+L
Sbjct: 27 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 86
Query: 332 QLIGYCTTSS-ERILVYPFMQN 352
L+G C S ++V P+M++
Sbjct: 87 SLLGICLRSEGSPLVVLPYMKH 108
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 276 SNIIGQGGFGKVYKGVLSDN----TKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 331
+ +IG+G FG VY G L DN AVK L G + F E ++ H N+L
Sbjct: 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 89
Query: 332 QLIGYCTTSS-ERILVYPFMQN 352
L+G C S ++V P+M++
Sbjct: 90 SLLGICLRSEGSPLVVLPYMKH 111
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 276 SNIIGQGGFGKVYKGVLSDN----TKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 331
+ +IG+G FG VY G L DN AVK L G + F E ++ H N+L
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 332 QLIGYCTTSS-ERILVYPFMQN 352
L+G C S ++V P+M++
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKH 116
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 276 SNIIGQGGFGKVYKGVLSDN----TKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 331
+ +IG+G FG VY G L DN AVK L G + F E ++ H N+L
Sbjct: 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91
Query: 332 QLIGYCTTSS-ERILVYPFMQN 352
L+G C S ++V P+M++
Sbjct: 92 SLLGICLRSEGSPLVVLPYMKH 113
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 279 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPG--GEAAFQREVHLISVAIHKNLLQLIGY 336
+GQG FG+V+ G + T+VA+K L+ PG AF +E ++ H+ L+QL Y
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLK----PGTMSPEAFLQEAQVMKKLRHEKLVQL--Y 69
Query: 337 CTTSSERILV 346
S E I +
Sbjct: 70 AVVSEEPIXI 79
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 6/103 (5%)
Query: 279 IGQGGFGKVYKGVLS------DNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQ 332
+G G FG+VY+G +S +VAVK L + S E F E +IS H+N+++
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 333 LIGYCTTSSERILVYPFMQNLSVAYRLRVSHKIYTKIISLSSL 375
IG S R ++ M + LR + ++ SL+ L
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 140
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 276 SNIIGQGGFGKVYKGVLSDN----TKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 331
+ +IG+G FG VY G L DN AVK L G + F E ++ H N+L
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 332 QLIGYCTTSS-ERILVYPFMQN 352
L+G C S ++V P+M++
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKH 114
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 276 SNIIGQGGFGKVYKGVLSDN----TKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 331
+ +IG+G FG VY G L DN AVK L G + F E ++ H N+L
Sbjct: 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 153
Query: 332 QLIGYCTTSS-ERILVYPFMQN 352
L+G C S ++V P+M++
Sbjct: 154 SLLGICLRSEGSPLVVLPYMKH 175
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 259 RRFSCRELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQ-DYYSPGGEAAFQR 317
RR S + ++ + IG G FG VYKG + VAVK L +P AF+
Sbjct: 23 RRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKN 80
Query: 318 EVHLISVAIHKNLLQLIGYCT 338
EV ++ H N+L +GY T
Sbjct: 81 EVGVLRKTRHVNILLFMGYST 101
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 259 RRFSCRELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQ-DYYSPGGEAAFQR 317
RR S + ++ + IG G FG VYKG + VAVK L +P AF+
Sbjct: 16 RRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKN 73
Query: 318 EVHLISVAIHKNLLQLIGYCT 338
EV ++ H N+L +GY T
Sbjct: 74 EVGVLRKTRHVNILLFMGYST 94
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 276 SNIIGQGGFGKVYKGVLSDN----TKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 331
+ +IG+G FG VY G L DN AVK L G + F E ++ H N+L
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 332 QLIGYCTTSS-ERILVYPFMQN 352
L+G C S ++V P+M++
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKH 116
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 276 SNIIGQGGFGKVYKGVLSDN----TKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 331
+ +IG+G FG VY G L DN AVK L G + F E ++ H N+L
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 332 QLIGYCTTSS-ERILVYPFMQN 352
L+G C S ++V P+M++
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKH 115
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 279 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPG--GEAAFQREVHLISVAIHKNLLQLIGY 336
+GQG FG+V+ G + T+VA+K L+ PG AF +E ++ H+ L+QL Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK----PGTMSPEAFLQEAQVMKKLRHEKLVQL--Y 79
Query: 337 CTTSSERILV 346
S E I +
Sbjct: 80 AVVSEEPIYI 89
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 279 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPG--GEAAFQREVHLISVAIHKNLLQLIGY 336
+GQG FG+V+ G + T+VA+K L+ PG AF +E ++ H+ L+QL Y
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLK----PGTMSPEAFLQEAQVMKKLRHEKLVQL--Y 76
Query: 337 CTTSSERILV 346
S E I +
Sbjct: 77 AVVSEEPIYI 86
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 6/103 (5%)
Query: 279 IGQGGFGKVYKGVLS------DNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQ 332
+G G FG+VY+G +S +VAVK L + S E F E +IS H+N+++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 333 LIGYCTTSSERILVYPFMQNLSVAYRLRVSHKIYTKIISLSSL 375
IG S R ++ M + LR + ++ SL+ L
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAML 155
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 279 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPG--GEAAFQREVHLISVAIHKNLLQLIGY 336
+GQG FG+V+ G + T+VA+K L+ PG AF +E ++ H+ L+QL Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK----PGTMSPEAFLQEAQVMKKLRHEKLVQL--Y 79
Query: 337 CTTSSERILV 346
S E I +
Sbjct: 80 AVVSEEPIYI 89
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 279 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPG--GEAAFQREVHLISVAIHKNLLQLIGY 336
+GQG FG+V+ G + T+VA+K L+ PG AF +E ++ H+ L+QL Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK----PGTMSPEAFLQEAQVMKKLRHEKLVQL--Y 79
Query: 337 CTTSSERILV 346
S E I +
Sbjct: 80 AVVSEEPIYI 89
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 279 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPG--GEAAFQREVHLISVAIHKNLLQLIGY 336
+GQG FG+V+ G + T+VA+K L+ PG AF +E ++ H+ L+QL Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK----PGTMSPEAFLQEAQVMKKLRHEKLVQL--Y 79
Query: 337 CTTSSERILV 346
S E I +
Sbjct: 80 AVVSEEPIYI 89
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 6/103 (5%)
Query: 279 IGQGGFGKVYKGVLS------DNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQ 332
+G G FG+VY+G +S +VAVK L + S E F E +IS H+N+++
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 333 LIGYCTTSSERILVYPFMQNLSVAYRLRVSHKIYTKIISLSSL 375
IG S R ++ M + LR + ++ SL+ L
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 132
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 279 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPG--GEAAFQREVHLISVAIHKNLLQLIGY 336
+GQG FG+V+ G + T+VA+K L+ PG AF +E ++ H+ L+QL Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK----PGTMSPEAFLQEAQVMKKLRHEKLVQL--Y 79
Query: 337 CTTSSERILV 346
S E I +
Sbjct: 80 AVVSEEPIYI 89
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 279 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPG--GEAAFQREVHLISVAIHKNLLQLIGY 336
+GQG FG+V+ G + T+VA+K L+ PG AF +E ++ H+ L+QL Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK----PGTMSPEAFLQEAQVMKKLRHEKLVQL--Y 79
Query: 337 CTTSSERILV 346
S E I +
Sbjct: 80 AVVSEEPIYI 89
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 279 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPG--GEAAFQREVHLISVAIHKNLLQLIGY 336
+GQG FG+V+ G + T+VA+K L+ PG AF +E ++ H+ L+QL Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK----PGTMSPEAFLQEAQVMKKLRHEKLVQL--Y 79
Query: 337 CTTSSERILV 346
S E I +
Sbjct: 80 AVVSEEPIYI 89
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Query: 268 LATDNFSESNIIGQGGFGKVYKGVL-SDNTKVAVKRLQDYYSPGGEA------AFQREVH 320
LA + IG+GGFG V+KG L D + VA+K L S G FQREV
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 321 LISVAIHKNLLQLIGYCTTSSERILVY 347
++S H N+++L G ++ +
Sbjct: 76 IMSNLNHPNIVKLYGLMHNPPRMVMEF 102
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Query: 261 FSCRELQLATDNFSESNIIGQGGFGKVYKGVLSDNT-KVAVKRLQDYYSPGGEAAFQREV 319
S + ++ + + + +G G +G+VY+GV + VAVK L++ E F +E
Sbjct: 1 MSLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEA 58
Query: 320 HLISVAIHKNLLQLIGYCTTSSERILVYPFM 350
++ H NL+QL+G CT ++ FM
Sbjct: 59 AVMKEIKHPNLVQLLGVCTREPPFYIITEFM 89
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Query: 268 LATDNFSESNIIGQGGFGKVYKGVL-SDNTKVAVKRLQDYYSPGGEA------AFQREVH 320
LA + IG+GGFG V+KG L D + VA+K L S G FQREV
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 321 LISVAIHKNLLQLIGYCTTSSERILVY 347
++S H N+++L G ++ +
Sbjct: 76 IMSNLNHPNIVKLYGLMHNPPRMVMEF 102
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 269 ATDNFSESNIIGQGGFGKVYKGVLS-DNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAI 326
+ D + +G+G +G+VYK + + N VA+KR++ ++ G REV L+
Sbjct: 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQ 91
Query: 327 HKNLLQLIGYCTTSSERILVYPFMQN 352
H+N+++L + L++ + +N
Sbjct: 92 HRNIIELKSVIHHNHRLHLIFEYAEN 117
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 6/103 (5%)
Query: 279 IGQGGFGKVYKGVLS------DNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQ 332
+G G FG+VY+G +S +VAVK L + S E F E +IS H+N+++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 333 LIGYCTTSSERILVYPFMQNLSVAYRLRVSHKIYTKIISLSSL 375
IG S R ++ M + LR + ++ SL+ L
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 141
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 6/103 (5%)
Query: 279 IGQGGFGKVYKGVLS------DNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQ 332
+G G FG+VY+G +S +VAVK L + S E F E +IS H+N+++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 333 LIGYCTTSSERILVYPFMQNLSVAYRLRVSHKIYTKIISLSSL 375
IG S R ++ M + LR + ++ SL+ L
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 141
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 267 QLATDNFSESNIIGQGGFGKVYKGVLSDNT-KVAVKRLQDYYSPGGEAAFQREVHLISVA 325
++ + + + +G G +G+VY+GV + VAVK L++ E F +E ++
Sbjct: 14 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEI 71
Query: 326 IHKNLLQLIGYCTTSSERILVYPFM 350
H NL+QL+G CT ++ FM
Sbjct: 72 KHPNLVQLLGVCTREPPFYIIIEFM 96
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 6/103 (5%)
Query: 279 IGQGGFGKVYKGVLS------DNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQ 332
+G G FG+VY+G +S +VAVK L + S E F E +IS H+N+++
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 333 LIGYCTTSSERILVYPFMQNLSVAYRLRVSHKIYTKIISLSSL 375
IG S R ++ M + LR + ++ SL+ L
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 181
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 6/103 (5%)
Query: 279 IGQGGFGKVYKGVLS------DNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQ 332
+G G FG+VY+G +S +VAVK L + S E F E +IS H+N+++
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 333 LIGYCTTSSERILVYPFMQNLSVAYRLRVSHKIYTKIISLSSL 375
IG S R ++ M + LR + ++ SL+ L
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 158
>pdb|2FT3|A Chain A, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|B Chain B, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|C Chain C, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|D Chain D, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|E Chain E, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|F Chain F, Crystal Structure Of The Biglycan Dimer Core Protein
Length = 332
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Query: 83 LGSNGFSGKISPSITKLKFLASLELQDNDLSGTLPDFLGSMTHLQSLNLANNKFSGSIPA 142
LG +ISP T L+LQ+ND+S D + HL +L L NNK S
Sbjct: 43 LGLKAVPKEISPDTT------LLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEK 96
Query: 143 TWSQLSNLKHLDLSSNNLTGRIPMQLFS 170
+S L L+ L +S N+L IP L S
Sbjct: 97 AFSPLRKLQKLYISKNHLV-EIPPNLPS 123
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Query: 268 LATDNFSESNIIGQGGFGKVYKGVL-SDNTKVAVKRLQDYYSPGGEA------AFQREVH 320
LA + IG+GGFG V+KG L D + VA+K L S G FQREV
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 321 LISVAIHKNLLQLIGYCTTSSERILVY 347
++S H N+++L G ++ +
Sbjct: 76 IMSNLNHPNIVKLYGLMHNPPRMVMEF 102
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 6/103 (5%)
Query: 279 IGQGGFGKVYKGVLS------DNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQ 332
+G G FG+VY+G +S +VAVK L + S E F E +IS H+N+++
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 333 LIGYCTTSSERILVYPFMQNLSVAYRLRVSHKIYTKIISLSSL 375
IG S R ++ M + LR + ++ SL+ L
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 157
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Query: 268 LATDNFSESNIIGQGGFGKVYKGV-LSDNTK----VAVKRLQDYYSPGGEAAFQREVHLI 322
L F + ++G G FG VYKG+ + + K VA+ L++ SP E +++
Sbjct: 46 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVM 105
Query: 323 SVAIHKNLLQLIGYCTTSSERIL--VYPF 349
+ + ++ +L+G C TS+ +++ + PF
Sbjct: 106 ASVDNPHVCRLLGICLTSTVQLITQLMPF 134
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 8/70 (11%)
Query: 279 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPG--GEAAFQREVHLISVAIHKNLLQLIGY 336
+G G FG+V+ G + NTKVA+K L+ PG +F E ++ H L+QL Y
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLK----PGTMSPESFLEEAQIMKKLKHDKLVQL--Y 70
Query: 337 CTTSSERILV 346
S E I +
Sbjct: 71 AVVSEEPIYI 80
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 267 QLATDNFSESNIIGQGGFGKVYKGVLSDNT-KVAVKRLQDYYSPGGEAAFQREVHLISVA 325
++ + + + +G G +G+VY+GV + VAVK L++ E F +E ++
Sbjct: 10 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEI 67
Query: 326 IHKNLLQLIGYCTTSSERILVYPFM 350
H NL+QL+G CT ++ FM
Sbjct: 68 KHPNLVQLLGVCTREPPFYIIIEFM 92
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 267 QLATDNFSESNIIGQGGFGKVYKGVLSDNT-KVAVKRLQDYYSPGGEAAFQREVHLISVA 325
++ + + + +G G +G+VY+GV + VAVK L++ E F +E ++
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEI 66
Query: 326 IHKNLLQLIGYCTTSSERILVYPFM 350
H NL+QL+G CT ++ FM
Sbjct: 67 KHPNLVQLLGVCTREPPFYIIIEFM 91
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 267 QLATDNFSESNIIGQGGFGKVYKGVLSDNT-KVAVKRLQDYYSPGGEAAFQREVHLISVA 325
++ + + + +G G +G+VY+GV + VAVK L++ E F +E ++
Sbjct: 14 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEI 71
Query: 326 IHKNLLQLIGYCTTSSERILVYPFM 350
H NL+QL+G CT ++ FM
Sbjct: 72 KHPNLVQLLGVCTREPPFYIITEFM 96
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 6/103 (5%)
Query: 279 IGQGGFGKVYKGVLS------DNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQ 332
+G G FG+VY+G +S +VAVK L + S E F E +IS H+N+++
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 333 LIGYCTTSSERILVYPFMQNLSVAYRLRVSHKIYTKIISLSSL 375
IG S R ++ M + LR + ++ SL+ L
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 147
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Query: 279 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEA--AFQREVHLISVAIHKNLLQLIGY 336
+G G FG+V+ G +++TKVAVK L+ PG + AF E +L+ H L++L
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLK----PGTMSVQAFLEEANLMKTLQHDKLVRLYAV 75
Query: 337 CTTSSERILVYPFM 350
T ++ FM
Sbjct: 76 VTKEEPIYIITEFM 89
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 267 QLATDNFSESNIIGQGGFGKVYKGVLSDNT-KVAVKRLQDYYSPGGEAAFQREVHLISVA 325
++ + + + +G G +G+VY+GV + VAVK L++ E F +E ++
Sbjct: 14 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEI 71
Query: 326 IHKNLLQLIGYCTTSSERILVYPFM 350
H NL+QL+G CT ++ FM
Sbjct: 72 KHPNLVQLLGVCTREPPFYIITEFM 96
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 267 QLATDNFSESNIIGQGGFGKVYKGVLSDNT-KVAVKRLQDYYSPGGEAAFQREVHLISVA 325
++ + + + +G G +G+VY+GV + VAVK L++ E F +E ++
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEI 66
Query: 326 IHKNLLQLIGYCTTSSERILVYPFM 350
H NL+QL+G CT ++ FM
Sbjct: 67 KHPNLVQLLGVCTREPPFYIITEFM 91
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Query: 268 LATDNFSESNIIGQGGFGKVYKGV-LSDNTKV----AVKRLQDYYSPGGEAAFQREVHLI 322
L F + ++ G FG VYKG+ + + KV A+K L++ SP E +++
Sbjct: 19 LKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 78
Query: 323 SVAIHKNLLQLIGYCTTSSERILV--YPF 349
+ + ++ +L+G C TS+ ++++ PF
Sbjct: 79 ASVDNPHVCRLLGICLTSTVQLIMQLMPF 107
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 267 QLATDNFSESNIIGQGGFGKVYKGVLSDNT-KVAVKRLQDYYSPGGEAAFQREVHLISVA 325
++ + + + +G G +G+VY+GV + VAVK L++ E F +E ++
Sbjct: 13 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEI 70
Query: 326 IHKNLLQLIGYCTTSSERILVYPFM 350
H NL+QL+G CT ++ FM
Sbjct: 71 KHPNLVQLLGVCTREPPFYIITEFM 95
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 267 QLATDNFSESNIIGQGGFGKVYKGVLSDNT-KVAVKRLQDYYSPGGEAAFQREVHLISVA 325
++ + + + +G G +G+VY+GV + VAVK L++ E F +E ++
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEI 66
Query: 326 IHKNLLQLIGYCTTSSERILVYPFM 350
H NL+QL+G CT ++ FM
Sbjct: 67 KHPNLVQLLGVCTREPPFYIIIEFM 91
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 267 QLATDNFSESNIIGQGGFGKVYKGVLSDNT-KVAVKRLQDYYSPGGEAAFQREVHLISVA 325
++ + + + +G G +G+VY+GV + VAVK L++ E F +E ++
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEI 66
Query: 326 IHKNLLQLIGYCTTSSERILVYPFM 350
H NL+QL+G CT ++ FM
Sbjct: 67 KHPNLVQLLGVCTREPPFYIITEFM 91
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Query: 268 LATDNFSESNIIGQGGFGKVYKGV-LSDNTKV----AVKRLQDYYSPGGEAAFQREVHLI 322
L F + ++ G FG VYKG+ + + KV A+K L++ SP E +++
Sbjct: 12 LKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 323 SVAIHKNLLQLIGYCTTSSERIL--VYPF 349
+ + ++ +L+G C TS+ +++ + PF
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQLITQLMPF 100
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 267 QLATDNFSESNIIGQGGFGKVYKGVLSDNT-KVAVKRLQDYYSPGGEAAFQREVHLISVA 325
++ + + + +G G +G+VY+GV + VAVK L++ E F +E ++
Sbjct: 14 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEI 71
Query: 326 IHKNLLQLIGYCTTSSERILVYPFM 350
H NL+QL+G CT ++ FM
Sbjct: 72 KHPNLVQLLGVCTREPPFYIITEFM 96
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 267 QLATDNFSESNIIGQGGFGKVYKGVLSDNT-KVAVKRLQDYYSPGGEAAFQREVHLISVA 325
++ + + + +G G +G+VY+GV + VAVK L++ E F +E ++
Sbjct: 11 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEI 68
Query: 326 IHKNLLQLIGYCTTSSERILVYPFM 350
H NL+QL+G CT ++ FM
Sbjct: 69 KHPNLVQLLGVCTREPPFYIITEFM 93
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 267 QLATDNFSESNIIGQGGFGKVYKGVLSDNT-KVAVKRLQDYYSPGGEAAFQREVHLISVA 325
++ + + + +G G +G+VY+GV + VAVK L++ E F +E ++
Sbjct: 11 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEI 68
Query: 326 IHKNLLQLIGYCTTSSERILVYPFM 350
H NL+QL+G CT ++ FM
Sbjct: 69 KHPNLVQLLGVCTREPPFYIITEFM 93
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 267 QLATDNFSESNIIGQGGFGKVYKGVLSDNT-KVAVKRLQDYYSPGGEAAFQREVHLISVA 325
++ + + + +G G +G+VY+GV + VAVK L++ E F +E ++
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEI 66
Query: 326 IHKNLLQLIGYCTTSSERILVYPFM 350
H NL+QL+G CT ++ FM
Sbjct: 67 KHPNLVQLLGVCTREPPFYIITEFM 91
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 267 QLATDNFSESNIIGQGGFGKVYKGVLSDNT-KVAVKRLQDYYSPGGEAAFQREVHLISVA 325
++ + + + +G G +G+VY+GV + VAVK L++ E F +E ++
Sbjct: 10 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEI 67
Query: 326 IHKNLLQLIGYCTTSSERILVYPFM 350
H NL+QL+G CT ++ FM
Sbjct: 68 KHPNLVQLLGVCTREPPFYIITEFM 92
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 267 QLATDNFSESNIIGQGGFGKVYKGVLSDNT-KVAVKRLQDYYSPGGEAAFQREVHLISVA 325
++ + + + +G G +G+VY+GV + VAVK L++ E F +E ++
Sbjct: 11 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEI 68
Query: 326 IHKNLLQLIGYCTTSSERILVYPFM 350
H NL+QL+G CT ++ FM
Sbjct: 69 KHPNLVQLLGVCTREPPFYIITEFM 93
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 6/103 (5%)
Query: 279 IGQGGFGKVYKGVLS------DNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQ 332
+G G FG+VY+G +S +VAVK L + S E F E +IS H+N+++
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 333 LIGYCTTSSERILVYPFMQNLSVAYRLRVSHKIYTKIISLSSL 375
IG S R ++ M + LR + ++ SL+ L
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 167
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 265 ELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRL-QDYYSPGGEAAFQREVHLIS 323
E ++ + +G G FG+V+ G + +TKVAVK L Q SP AF E +L+
Sbjct: 16 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD---AFLAEANLMK 72
Query: 324 VAIHKNLLQLIGYCTTSSERI-LVYPFMQNLSVAYRLRVSHKIYTKIISL 372
H+ L++L Y + E I ++ +M+N S+ L+ I I L
Sbjct: 73 QLQHQRLVRL--YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKL 120
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Query: 268 LATDNFSESNIIGQGGFGKVYKGV-LSDNTKV----AVKRLQDYYSPGGEAAFQREVHLI 322
L F + ++ G FG VYKG+ + + KV A+K L++ SP E +++
Sbjct: 19 LKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 78
Query: 323 SVAIHKNLLQLIGYCTTSSERIL--VYPF 349
+ + ++ +L+G C TS+ +++ + PF
Sbjct: 79 ASVDNPHVCRLLGICLTSTVQLITQLMPF 107
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 267 QLATDNFSESNIIGQGGFGKVYKGVLSDNT-KVAVKRLQDYYSPGGEAAFQREVHLISVA 325
++ + + + +G G +G+VY+GV + VAVK L++ E F +E ++
Sbjct: 14 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEI 71
Query: 326 IHKNLLQLIGYCTTSSERILVYPFM 350
H NL+QL+G CT ++ FM
Sbjct: 72 KHPNLVQLLGVCTREPPFYIITEFM 96
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 265 ELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRL-QDYYSPGGEAAFQREVHLIS 323
E ++ + +G G FG+V+ G + +TKVAVK L Q SP AF E +L+
Sbjct: 9 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD---AFLAEANLMK 65
Query: 324 VAIHKNLLQLIGYCTTSSERI-LVYPFMQNLSVAYRLRVSHKIYTKIISL 372
H+ L++L Y + E I ++ +M+N S+ L+ I I L
Sbjct: 66 QLQHQRLVRL--YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKL 113
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 265 ELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRL-QDYYSPGGEAAFQREVHLIS 323
E ++ + +G G FG+V+ G + +TKVAVK L Q SP AF E +L+
Sbjct: 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD---AFLAEANLMK 63
Query: 324 VAIHKNLLQLIGYCTTSSERI-LVYPFMQNLSVAYRLRVSHKIYTKIISL 372
H+ L++L Y + E I ++ +M+N S+ L+ I I L
Sbjct: 64 QLQHQRLVRL--YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKL 111
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 265 ELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRL-QDYYSPGGEAAFQREVHLIS 323
E ++ + +G G FG+V+ G + +TKVAVK L Q SP AF E +L+
Sbjct: 8 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD---AFLAEANLMK 64
Query: 324 VAIHKNLLQLIGYCTTSSERI-LVYPFMQNLSVAYRLRVSHKIYTKIISL 372
H+ L++L Y + E I ++ +M+N S+ L+ I I L
Sbjct: 65 QLQHQRLVRL--YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKL 112
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 267 QLATDNFSESNIIGQGGFGKVYKGVLSDNT-KVAVKRLQDYYSPGGEAAFQREVHLISVA 325
++ + + + +G G +G+VY+GV + VAVK L++ E F +E ++
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEI 66
Query: 326 IHKNLLQLIGYCTTSSERILVYPFM 350
H NL+QL+G CT ++ FM
Sbjct: 67 KHPNLVQLLGVCTREPPFYIITEFM 91
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 265 ELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRL-QDYYSPGGEAAFQREVHLIS 323
E ++ + +G G FG+V+ G + +TKVAVK L Q SP AF E +L+
Sbjct: 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD---AFLAEANLMK 63
Query: 324 VAIHKNLLQLIGYCTTSSERI-LVYPFMQNLSVAYRLRVSHKIYTKIISL 372
H+ L++L Y + E I ++ +M+N S+ L+ I I L
Sbjct: 64 QLQHQRLVRL--YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKL 111
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 267 QLATDNFSESNIIGQGGFGKVYKGVLSDNT-KVAVKRLQDYYSPGGEAAFQREVHLISVA 325
++ + + + +G G +G+VY+GV + VAVK L++ E F +E ++
Sbjct: 22 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEI 79
Query: 326 IHKNLLQLIGYCTTSSERILVYPFM 350
H NL+QL+G CT ++ FM
Sbjct: 80 KHPNLVQLLGVCTREPPFYIITEFM 104
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 265 ELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRL-QDYYSPGGEAAFQREVHLIS 323
E ++ + +G G FG+V+ G + +TKVAVK L Q SP AF E +L+
Sbjct: 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD---AFLAEANLMK 63
Query: 324 VAIHKNLLQLIGYCTTSSERI-LVYPFMQNLSVAYRLRVSHKIYTKIISL 372
H+ L++L Y + E I ++ +M+N S+ L+ I I L
Sbjct: 64 QLQHQRLVRL--YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKL 111
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 265 ELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRL-QDYYSPGGEAAFQREVHLIS 323
E ++ + +G G FG+V+ G + +TKVAVK L Q SP AF E +L+
Sbjct: 13 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD---AFLAEANLMK 69
Query: 324 VAIHKNLLQLIGYCTTSSERI-LVYPFMQNLSVAYRLRVSHKIYTKIISL 372
H+ L++L Y + E I ++ +M+N S+ L+ I I L
Sbjct: 70 QLQHQRLVRL--YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKL 117
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 265 ELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRL-QDYYSPGGEAAFQREVHLIS 323
E ++ + +G G FG+V+ G + +TKVAVK L Q SP AF E +L+
Sbjct: 12 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD---AFLAEANLMK 68
Query: 324 VAIHKNLLQLIGYCTTSSERI-LVYPFMQNLSVAYRLRVSHKIYTKIISL 372
H+ L++L Y + E I ++ +M+N S+ L+ I I L
Sbjct: 69 QLQHQRLVRL--YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKL 116
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 265 ELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRL-QDYYSPGGEAAFQREVHLIS 323
E ++ + +G G FG+V+ G + +TKVAVK L Q SP AF E +L+
Sbjct: 15 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD---AFLAEANLMK 71
Query: 324 VAIHKNLLQLIGYCTTSSERI-LVYPFMQNLSVAYRLRVSHKIYTKIISL 372
H+ L++L Y + E I ++ +M+N S+ L+ I I L
Sbjct: 72 QLQHQRLVRL--YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKL 119
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 279 IGQGGFGKVYKGVLSDNT-KVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 337
+G G +G+VY+GV + VAVK L++ E F +E ++ H NL+QL+G C
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVC 285
Query: 338 TTSSERILVYPFM 350
T ++ FM
Sbjct: 286 TREPPFYIITEFM 298
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 265 ELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRL-QDYYSPGGEAAFQREVHLIS 323
E ++ + +G G FG+V+ G + +TKVAVK L Q SP AF E +L+
Sbjct: 3 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD---AFLAEANLMK 59
Query: 324 VAIHKNLLQLIGYCTTSSERI-LVYPFMQNLSVAYRLRVSHKIYTKIISL 372
H+ L++L Y + E I ++ +M+N S+ L+ I I L
Sbjct: 60 QLQHQRLVRL--YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKL 107
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 265 ELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRL-QDYYSPGGEAAFQREVHLIS 323
E ++ + +G G FG+V+ G + +TKVAVK L Q SP AF E +L+
Sbjct: 13 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD---AFLAEANLMK 69
Query: 324 VAIHKNLLQLIGYCTTSSERI-LVYPFMQNLSVAYRLRVSHKIYTKIISL 372
H+ L++L Y + E I ++ +M+N S+ L+ I I L
Sbjct: 70 QLQHQRLVRL--YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKL 117
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 265 ELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRL-QDYYSPGGEAAFQREVHLIS 323
E ++ + +G G FG+V+ G + +TKVAVK L Q SP AF E +L+
Sbjct: 17 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD---AFLAEANLMK 73
Query: 324 VAIHKNLLQLIGYCTTSSERI-LVYPFMQNLSVAYRLRVSHKIYTKIISL 372
H+ L++L Y + E I ++ +M+N S+ L+ I I L
Sbjct: 74 QLQHQRLVRL--YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKL 121
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 276 SNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIG 335
S IG G FG VYKG + V + ++ D +P AF+ EV ++ H N+L +G
Sbjct: 41 STRIGSGSFGTVYKGKWHGDVAVKILKVVD-PTPEQFQAFRNEVAVLRKTRHVNILLFMG 99
Query: 336 YCTTSS 341
Y T +
Sbjct: 100 YMTKDN 105
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Query: 271 DNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAIHKN 329
+ + + +G+G +G VYK S VA+KR++ D G + RE+ L+ H N
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 330 LLQLIGYCTTSSERILVYPFMQN 352
++ LI + LV+ FM+
Sbjct: 81 IVSLIDVIHSERCLTLVFEFMEK 103
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 265 ELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRL-QDYYSPGGEAAFQREVHLIS 323
E ++ + +G G FG+V+ G + +TKVAVK L Q SP AF E +L+
Sbjct: 2 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD---AFLAEANLMK 58
Query: 324 VAIHKNLLQLIGYCTTSSERI-LVYPFMQNLSVAYRLRVSHKIYTKIISL 372
H+ L++L Y + E I ++ +M+N S+ L+ I I L
Sbjct: 59 QLQHQRLVRL--YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKL 106
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Query: 271 DNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAIHKN 329
+ + + +G+G +G VYK S VA+KR++ D G + RE+ L+ H N
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 330 LLQLIGYCTTSSERILVYPFMQN 352
++ LI + LV+ FM+
Sbjct: 81 IVSLIDVIHSERCLTLVFEFMEK 103
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 279 IGQGGFGKVYKGVLSDNT-KVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 337
+G G +G+VY+GV + VAVK L++ E F +E ++ H NL+QL+G C
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVC 324
Query: 338 TTSSERILVYPFM 350
T ++ FM
Sbjct: 325 TREPPFYIITEFM 337
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 279 IGQGGFGKVYKGVLSDNT-KVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 337
+G G +G+VY+GV + VAVK L++ E F +E ++ H NL+QL+G C
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVC 282
Query: 338 TTSSERILVYPFM 350
T ++ FM
Sbjct: 283 TREPPFYIITEFM 295
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 269 ATDNFSESNIIGQGGFGKVYKGV-LSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIH 327
++ F + +G G + VYKG+ + VA+K ++ G + RE+ L+ H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 328 KNLLQLIGYCTTSSERILVYPFMQN 352
+N+++L T ++ LV+ FM N
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFMDN 87
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 8/101 (7%)
Query: 255 LTQLRRFSCRELQLATDNFSESNIIGQGGFGKVYKGVL------SDNTKVAVKRLQDYYS 308
+ Q ++ +E+ L+ F E +G+ FGKVYKG L VA+K L+D
Sbjct: 12 INQHKQAKLKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAE 69
Query: 309 PGGEAAFQREVHLISVAIHKNLLQLIGYCTTSSERILVYPF 349
F+ E L + H N++ L+G T +++ +
Sbjct: 70 GPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSY 110
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Query: 279 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEA--AFQREVHLISVAIHKNLLQLIGY 336
+G G FG+V+ G +++TKVAVK L+ PG + AF E +L+ H L++L
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLK----PGTMSVQAFLEEANLMKTLQHDKLVRLYAV 76
Query: 337 CTTSSERILVYPFM 350
T ++ +M
Sbjct: 77 VTREEPIYIITEYM 90
>pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit
Length = 192
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 44/103 (42%), Gaps = 5/103 (4%)
Query: 90 GKISPS--ITKLKFLASLELQDNDLSGTLPDFLGSMTHLQSLNLANNKFSGSIPATWSQL 147
G+IS +L L LEL+ N L+G P+ +H+Q L L NK + L
Sbjct: 42 GRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGL 101
Query: 148 SNLKHLDLSSNNLTGRIP---MQLFSVATFNFTGTHLICGSSL 187
LK L+L N ++ +P L S+ + N C L
Sbjct: 102 HQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHL 144
Score = 32.7 bits (73), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 30/67 (44%)
Query: 78 VISLTLGSNGFSGKISPSITKLKFLASLELQDNDLSGTLPDFLGSMTHLQSLNLANNKFS 137
+ L LG N + L L +L L DN +S +P + L SLNLA+N F+
Sbjct: 80 IQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFN 139
Query: 138 GSIPATW 144
+ W
Sbjct: 140 CNCHLAW 146
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 49/113 (43%), Gaps = 8/113 (7%)
Query: 245 VAGEDDCKVSLTQLRRFSCR-ELQLATDNFSESNIIGQGGFGKVYKGVLSDNTK------ 297
V G D + R + + + +N ++G G FGKV +K
Sbjct: 18 VTGSSDNEYFYVDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQ 77
Query: 298 VAVKRLQDYYSPGGEAAFQREVHLIS-VAIHKNLLQLIGYCTTSSERILVYPF 349
VAVK L++ A E+ +++ + H+N++ L+G CT S L++ +
Sbjct: 78 VAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEY 130
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 276 SNIIGQGGFGKVYKGVLSDN---TKVAVKRLQDYYSPGGEAAFQREVHLI-SVAIHKNLL 331
++IG+G FG+V K + + A+KR+++Y S F E+ ++ + H N++
Sbjct: 20 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 79
Query: 332 QLIGYC 337
L+G C
Sbjct: 80 NLLGAC 85
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 269 ATDNFSESNIIGQGGFGKVYKGVLS-DNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAI 326
+ +NF + IG+G +G VYK VA+K+++ D + G + RE+ L+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 327 HKNLLQLIGYCTTSSERILVYPFMQN 352
H N+++L+ T ++ LV+ F+
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQ 87
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 269 ATDNFSESNIIGQGGFGKVYKGVLS-DNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAI 326
+ +NF + IG+G +G VYK VA+K+++ D + G + RE+ L+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 327 HKNLLQLIGYCTTSSERILVYPFMQN 352
H N+++L+ T ++ LV+ F+
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ 86
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 276 SNIIGQGGFGKVYKGVLSDN---TKVAVKRLQDYYSPGGEAAFQREVHLI-SVAIHKNLL 331
++IG+G FG+V K + + A+KR+++Y S F E+ ++ + H N++
Sbjct: 27 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 86
Query: 332 QLIGYC 337
L+G C
Sbjct: 87 NLLGAC 92
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 269 ATDNFSESNIIGQGGFGKVYKGVLS-DNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAI 326
+ +NF + IG+G +G VYK VA+K+++ D + G + RE+ L+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 327 HKNLLQLIGYCTTSSERILVYPFMQN 352
H N+++L+ T ++ LV+ F+
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ 86
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 271 DNFSESNIIGQGGFGKVYKGVLS-DNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAIHK 328
+NF + IG+G +G VYK VA+K+++ D + G + RE+ L+ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 329 NLLQLIGYCTTSSERILVYPFMQN 352
N+++L+ T ++ LV+ F+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ 86
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 271 DNFSESNIIGQGGFGKVYKGVLS-DNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAIHK 328
+NF + IG+G +G VYK VA+K+++ D + G + RE+ L+ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 329 NLLQLIGYCTTSSERILVYPFMQN 352
N+++L+ T ++ LV+ F+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ 86
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 271 DNFSESNIIGQGGFGKVYKGVLS-DNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAIHK 328
+NF + IG+G +G VYK VA+K+++ D + G + RE+ L+ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 329 NLLQLIGYCTTSSERILVYPFMQN 352
N+++L+ T ++ LV+ F+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ 85
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 276 SNIIGQGGFGKVYKGVLSDN---TKVAVKRLQDYYSPGGEAAFQREVHLI-SVAIHKNLL 331
++IG+G FG+V K + + A+KR+++Y S F E+ ++ + H N++
Sbjct: 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 89
Query: 332 QLIGYC 337
L+G C
Sbjct: 90 NLLGAC 95
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 269 ATDNFSESNIIGQGGFGKVYKGVLS-DNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAI 326
+ +NF + IG+G +G VYK VA+K+++ D + G + RE+ L+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 327 HKNLLQLIGYCTTSSERILVYPFMQN 352
H N+++L+ T ++ LV+ F+
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQ 87
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 269 ATDNFSESNIIGQGGFGKVYKGVLS-DNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAI 326
+ +NF + IG+G +G VYK VA+K+++ D + G + RE+ L+
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 327 HKNLLQLIGYCTTSSERILVYPFMQN 352
H N+++L+ T ++ LV+ F+
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFLHQ 90
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 269 ATDNFSESNIIGQGGFGKVYKGVLS-DNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAI 326
+ +NF + IG+G +G VYK VA+K+++ D + G + RE+ L+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 327 HKNLLQLIGYCTTSSERILVYPFMQN 352
H N+++L+ T ++ LV+ F+
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQ 89
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 269 ATDNFSESNIIGQGGFGKVYKGVLS-DNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAI 326
+ +NF + IG+G +G VYK VA+K+++ D + G + RE+ L+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 327 HKNLLQLIGYCTTSSERILVYPFMQN 352
H N+++L+ T ++ LV+ F+
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQ 88
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 269 ATDNFSESNIIGQGGFGKVYKGVLS-DNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAI 326
+ +NF + IG+G +G VYK VA+K+++ D + G + RE+ L+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 327 HKNLLQLIGYCTTSSERILVYPFMQN 352
H N+++L+ T ++ LV+ F+
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ 86
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 271 DNFSESNIIGQGGFGKVYKGVLS-DNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAIHK 328
+NF + IG+G +G VYK VA+K+++ D + G + RE+ L+ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 329 NLLQLIGYCTTSSERILVYPFMQN 352
N+++L+ T ++ LV+ F+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ 85
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 262 SCRELQLATDNFSESNIIGQGGFGKVYKGVLSDNT-KVAVKRLQDYYSPGGEAAFQREVH 320
S + ++ + + + +G G +G+VY GV + VAVK L++ E F +E
Sbjct: 23 SMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAA 80
Query: 321 LISVAIHKNLLQLIGYCTTSSERILVYPFM 350
++ H NL+QL+G CT +V +M
Sbjct: 81 VMKEIKHPNLVQLLGVCTLEPPFYIVTEYM 110
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 269 ATDNFSESNIIGQGGFGKVYKGVLS-DNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAI 326
+ +NF + IG+G +G VYK VA+K+++ D + G + RE+ L+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 327 HKNLLQLIGYCTTSSERILVYPFMQN 352
H N+++L+ T ++ LV+ F+
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ 86
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 269 ATDNFSESNIIGQGGFGKVYKGVLS-DNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAI 326
+ +NF + IG+G +G VYK VA+K+++ D + G + RE+ L+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 327 HKNLLQLIGYCTTSSERILVYPFMQN 352
H N+++L+ T ++ LV+ F+
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQ 89
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 269 ATDNFSESNIIGQGGFGKVYKGVLS-DNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAI 326
+ +NF + IG+G +G VYK VA+K+++ D + G + RE+ L+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 327 HKNLLQLIGYCTTSSERILVYPFMQN 352
H N+++L+ T ++ LV+ F+
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQ 87
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 269 ATDNFSESNIIGQGGFGKVYKGVLS-DNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAI 326
+ +NF + IG+G +G VYK VA+K+++ D + G + RE+ L+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 327 HKNLLQLIGYCTTSSERILVYPFMQN 352
H N+++L+ T ++ LV+ F+
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ 86
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 271 DNFSESNIIGQGGFGKVYKGVLS-DNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAIHK 328
+NF + IG+G +G VYK VA+K+++ D + G + RE+ L+ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 329 NLLQLIGYCTTSSERILVYPFMQN 352
N+++L+ T ++ LV+ F+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ 86
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 271 DNFSESNIIGQGGFGKVYKGVLS-DNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAIHK 328
+NF + IG+G +G VYK VA+K+++ D + G + RE+ L+ H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 329 NLLQLIGYCTTSSERILVYPFMQN 352
N+++L+ T ++ LV+ F+
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFLHQ 90
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 271 DNFSESNIIGQGGFGKVYKGVLS-DNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAIHK 328
+NF + IG+G +G VYK VA+K+++ D + G + RE+ L+ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 329 NLLQLIGYCTTSSERILVYPFMQN 352
N+++L+ T ++ LV+ F+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ 85
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 269 ATDNFSESNIIGQGGFGKVYKGVLS-DNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAI 326
+ +NF + IG+G +G VYK VA+K+++ D + G + RE+ L+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 327 HKNLLQLIGYCTTSSERILVYPFMQN 352
H N+++L+ T ++ LV+ F+
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQ 89
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 269 ATDNFSESNIIGQGGFGKVYKGVLS-DNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAI 326
+ +NF + IG+G +G VYK VA+K+++ D + G + RE+ L+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 327 HKNLLQLIGYCTTSSERILVYPFMQN 352
H N+++L+ T ++ LV+ F+
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQ 88
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 271 DNFSESNIIGQGGFGKVYKGVLS-DNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAIHK 328
+NF + IG+G +G VYK VA+K+++ D + G + RE+ L+ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 329 NLLQLIGYCTTSSERILVYPFMQN 352
N+++L+ T ++ LV+ F+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ 85
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Query: 268 LATDNFSESNIIGQGGFGKVYKGVL---SDNTK--VAVKRLQDYYSPGGEAAFQREVHLI 322
L + ++G G FG VYKG+ +N K VA+K L++ SP E +++
Sbjct: 14 LKETELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVM 73
Query: 323 SVAIHKNLLQLIGYCTTSSERIL 345
+ + +L+G C TS+ +++
Sbjct: 74 AGVGSPYVSRLLGICLTSTVQLV 96
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 271 DNFSESNIIGQGGFGKVYKGVLS-DNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAIHK 328
+NF + IG+G +G VYK VA+K+++ D + G + RE+ L+ H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 329 NLLQLIGYCTTSSERILVYPFMQN 352
N+++L+ T ++ LV+ F+
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQ 93
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 269 ATDNFSESNIIGQGGFGKVYKGVLS-DNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAI 326
+ +NF + IG+G +G VYK VA+K+++ D + G + RE+ L+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 327 HKNLLQLIGYCTTSSERILVYPFMQN 352
H N+++L+ T ++ LV+ F+
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQ 88
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 271 DNFSESNIIGQGGFGKVYKG--VLSDNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAIH 327
+NF + IG+G +G VYK L+ VA+K+++ D + G + RE+ L+ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 328 KNLLQLIGYCTTSSERILVYPFMQN 352
N+++L+ T ++ LV+ F+
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQ 86
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 271 DNFSESNIIGQGGFGKVYKGVLS-DNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAIHK 328
+NF + IG+G +G VYK VA+K+++ D + G + RE+ L+ H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 329 NLLQLIGYCTTSSERILVYPFMQN 352
N+++L+ T ++ LV+ F+
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQ 87
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Query: 260 RFSCRELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQ-DYYSPGGEAAFQRE 318
R S + ++ + IG G FG VYKG + VAVK L +P AF+ E
Sbjct: 1 RDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNE 58
Query: 319 VHLISVAIHKNLLQLIGYCT 338
V ++ H N+L +GY T
Sbjct: 59 VGVLRKTRHVNILLFMGYST 78
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 271 DNFSESNIIGQGGFGKVYKGVLS-DNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAIHK 328
+NF + IG+G +G VYK VA+K+++ D + G + RE+ L+ H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 329 NLLQLIGYCTTSSERILVYPFMQN 352
N+++L+ T ++ LV+ F+
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQ 93
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 269 ATDNFSESNIIGQGGFGKVYKGVLS-DNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAI 326
+ +NF + IG+G +G VYK VA+K+++ D + G + RE+ L+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 327 HKNLLQLIGYCTTSSERILVYPFM 350
H N+++L+ T ++ LV+ F+
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL 87
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 269 ATDNFSESNIIGQGGFGKVYKGVLS-DNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAI 326
+ +NF + IG+G +G VYK VA+K+++ D + G + RE+ L+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 327 HKNLLQLIGYCTTSSERILVYPFM 350
H N+++L+ T ++ LV+ F+
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL 86
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Query: 260 RFSCRELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQ-DYYSPGGEAAFQRE 318
R S + ++ + IG G FG VYKG + VAVK L +P AF+ E
Sbjct: 13 RDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNE 70
Query: 319 VHLISVAIHKNLLQLIGYCT 338
V ++ H N+L +GY T
Sbjct: 71 VGVLRKTRHVNILLFMGYST 90
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 6/105 (5%)
Query: 267 QLATDNFSESNIIGQGGFGKVYKGVL------SDNTKVAVKRLQDYYSPGGEAAFQREVH 320
+ N +G+G FGKV K + T VAVK L++ SP E +
Sbjct: 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFN 78
Query: 321 LISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRVSHKI 365
++ H ++++L G C+ +L+ + + S+ LR S K+
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKV 123
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 269 ATDNFSESNIIGQGGFGKVYKGVLS-DNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAI 326
+ +NF + IG+G +G VYK VA+K+++ D + G + RE+ L+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 327 HKNLLQLIGYCTTSSERILVYPFM 350
H N+++L+ T ++ LV+ F+
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL 85
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 269 ATDNFSESNIIGQGGFGKVYKGVLS-DNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAI 326
+ +NF + IG+G +G VYK VA+K+++ D + G + RE+ L+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 327 HKNLLQLIGYCTTSSERILVYPFM 350
H N+++L+ T ++ LV+ F+
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL 87
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 6/105 (5%)
Query: 267 QLATDNFSESNIIGQGGFGKVYKGVL------SDNTKVAVKRLQDYYSPGGEAAFQREVH 320
+ N +G+G FGKV K + T VAVK L++ SP E +
Sbjct: 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFN 78
Query: 321 LISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRVSHKI 365
++ H ++++L G C+ +L+ + + S+ LR S K+
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKV 123
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 6/105 (5%)
Query: 267 QLATDNFSESNIIGQGGFGKVYKGVL------SDNTKVAVKRLQDYYSPGGEAAFQREVH 320
+ N +G+G FGKV K + T VAVK L++ SP E +
Sbjct: 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFN 78
Query: 321 LISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRVSHKI 365
++ H ++++L G C+ +L+ + + S+ LR S K+
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKV 123
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 4/108 (3%)
Query: 276 SNIIGQGGFGKVYKGVLSDNTK----VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 331
+IG G FG+V G L K VA+K L+ Y+ F E ++ H N++
Sbjct: 27 ERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 86
Query: 332 QLIGYCTTSSERILVYPFMQNLSVAYRLRVSHKIYTKIISLSSLHCFS 379
L G T S ++V +M+N S+ L+ + +T I + L S
Sbjct: 87 HLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGIS 134
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 4/98 (4%)
Query: 276 SNIIGQGGFGKVYKGVLSDNTK----VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 331
+IG G FG+V G L K VA+K L+ Y+ F E ++ H N++
Sbjct: 34 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 93
Query: 332 QLIGYCTTSSERILVYPFMQNLSVAYRLRVSHKIYTKI 369
L G T +++ +M+N S+ LR + +T I
Sbjct: 94 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVI 131
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 273 FSESNIIGQGGFGKVYKGVLSD--------NTKVAVKRLQDYYSPGGEAAFQREVHLISV 324
F+ES +GQG F K++KGV + T+V +K L + E+ F+ ++S
Sbjct: 12 FNES--LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFE-AASMMSK 68
Query: 325 AIHKNLLQLIGYCTTSSERILVYPFMQ 351
HK+L+ G C E ILV F++
Sbjct: 69 LSHKHLVLNYGVCVCGDENILVQEFVK 95
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 4/98 (4%)
Query: 276 SNIIGQGGFGKVYKGVLSDNTK----VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 331
+IG G FG+V G L K VA+K L+ Y+ F E ++ H N++
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 72
Query: 332 QLIGYCTTSSERILVYPFMQNLSVAYRLRVSHKIYTKI 369
L G T +++ +M+N S+ LR + +T I
Sbjct: 73 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVI 110
>pdb|3UL8|A Chain A, Crystal Structure Of The Tv3 Mutant V134l
Length = 279
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 52/88 (59%), Gaps = 14/88 (15%)
Query: 76 GNVI-SLTLGSNGFSGKISPSITKLKFLASLELQDNDLSGTLPDF-LGSMTHLQSLNLAN 133
GN I SL LG+ FSG ++ L+ L +LE +L +F +G + L+ LN+A+
Sbjct: 87 GNPIQSLALGA--FSG-----LSSLQKLVALETN----LASLENFPIGHLKTLKELNVAH 135
Query: 134 NKF-SGSIPATWSQLSNLKHLDLSSNNL 160
N S +P +S L+NL+HLDLSSN +
Sbjct: 136 NLIQSFKLPEYFSNLTNLEHLDLSSNKI 163
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 260 RFSCRELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQ-DYYSPGGEAAFQRE 318
R + + ++ + IG G FG VYKG + VAVK L +P AF+ E
Sbjct: 13 RDAADDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNE 70
Query: 319 VHLISVAIHKNLLQLIGYCTT 339
V ++ H N+L +GY T
Sbjct: 71 VGVLRKTRHVNILLFMGYSTA 91
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 4/98 (4%)
Query: 276 SNIIGQGGFGKVYKGVLSDNTK----VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 331
+IG G FG+V G L K VA+K L+ Y+ F E ++ H N++
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 78
Query: 332 QLIGYCTTSSERILVYPFMQNLSVAYRLRVSHKIYTKI 369
L G T +++ +M+N S+ LR + +T I
Sbjct: 79 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVI 116
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 262 SCRELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQ-DYYSPGGEAAFQREVH 320
S + ++ + IG G FG VYKG + VAVK L +P AF+ EV
Sbjct: 4 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVG 61
Query: 321 LISVAIHKNLLQLIGYCT 338
++ H N+L +GY T
Sbjct: 62 VLRKTRHVNILLFMGYST 79
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 262 SCRELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQ-DYYSPGGEAAFQREVH 320
S + ++ + IG G FG VYKG + VAVK L +P AF+ EV
Sbjct: 1 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVG 58
Query: 321 LISVAIHKNLLQLIGYCT 338
++ H N+L +GY T
Sbjct: 59 VLRKTRHVNILLFMGYST 76
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 262 SCRELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQ-DYYSPGGEAAFQREVH 320
S + ++ + IG G FG VYKG + VAVK L +P AF+ EV
Sbjct: 4 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVG 61
Query: 321 LISVAIHKNLLQLIGYCT 338
++ H N+L +GY T
Sbjct: 62 VLRKTRHVNILLFMGYST 79
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
Query: 264 RELQLATDNFSESNIIGQGGFGKVYKGVL------SDNTKVAVKRLQDYYSPGGEAAFQR 317
+E+ L+ F E +G+ FGKVYKG L VA+K L+D F+
Sbjct: 4 KEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRH 61
Query: 318 EVHLISVAIHKNLLQLIGYCTTSSERILVYPF 349
E L + H N++ L+G T +++ +
Sbjct: 62 EAMLRARLQHPNVVCLLGVVTKDQPLSMIFSY 93
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 279 IGQGGFGKVYKGVLSDNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 337
IG G FG VYKG + VAVK L +P AF+ EV ++ H N+L +GY
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 338 T 338
T
Sbjct: 74 T 74
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 279 IGQGGFGKVYKGVLSDNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 337
IG G FG VYKG + VAVK L +P AF+ EV ++ H N+L +GY
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 338 T 338
T
Sbjct: 74 T 74
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 279 IGQGGFGKVYKGVLSDNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 337
IG G FG VYKG + VAVK L +P AF+ EV ++ H N+L +GY
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 338 TT 339
T
Sbjct: 74 TA 75
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Query: 271 DNFSESNIIGQGGFGKVYKG--VLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHK 328
+NF + IG+G +G VYK L+ K D + G + RE+ L+ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 329 NLLQLIGYCTTSSERILVYPFMQN 352
N+++L+ T ++ LV+ F+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ 86
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Query: 271 DNFSESNIIGQGGFGKVYKG--VLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHK 328
+NF + IG+G +G VYK L+ K D + G + RE+ L+ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 329 NLLQLIGYCTTSSERILVYPFMQN 352
N+++L+ T ++ LV+ F+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ 85
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Query: 267 QLATDNFSESNIIGQGGFGKVYKGVLSDNTK--VAVKRL--QDYYSPGGEAAFQREVHLI 322
Q A ++F +G+G FG VY N+K +A+K L G E +REV +
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLA-REKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 62
Query: 323 SVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYR 358
S H N+L+L GY S+ L+ + L YR
Sbjct: 63 SHLRHPNILRLYGYFHDSTRVYLILEYAP-LGTVYR 97
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 279 IGQGGFGKVYKGV-LSDNTKVAVKR-LQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 336
IGQG FG+V+K KVA+K+ L + G RE+ ++ + H+N++ LI
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 337 CTTSS 341
C T +
Sbjct: 85 CRTKA 89
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 268 LATDNFSESNIIGQGGFGKVYKGVLS----DNTKVAVKRLQDYYSPGGEAAFQREVHLIS 323
+A ++ + I+G+G FG+VY+GV + + VAVK + + + F E ++
Sbjct: 5 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 64
Query: 324 VAIHKNLLQLIGYCTTSSERILV--YPF 349
H ++++LIG I++ YP+
Sbjct: 65 NLDHPHIVKLIGIIEEEPTWIIMELYPY 92
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 273 FSESNIIGQGGFGKVYKGVLSD--------NTKVAVKRLQDYYSPGGEAAFQREVHLISV 324
F+ES +GQG F K++KGV + T+V +K L + E+ F+ ++S
Sbjct: 12 FNES--LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFE-AASMMSK 68
Query: 325 AIHKNLLQLIGYCTTSSERILVYPFMQ 351
HK+L+ G C E ILV F++
Sbjct: 69 LSHKHLVLNYGVCFCGDENILVQEFVK 95
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 57/99 (57%), Gaps = 16/99 (16%)
Query: 67 SWSHVTCR--NGNVI-SLTLGSNGFSGKISPSITKLKFLASLELQDNDLSGTLPDF-LGS 122
S SH++ GN I SL LG+ FSG ++ L+ L ++E +L +F +G
Sbjct: 74 SLSHLSTLILTGNPIQSLALGA--FSG-----LSSLQKLVAVETN----LASLENFPIGH 122
Query: 123 MTHLQSLNLANNKF-SGSIPATWSQLSNLKHLDLSSNNL 160
+ L+ LN+A+N S +P +S L+NL+HLDLSSN +
Sbjct: 123 LKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI 161
Score = 35.4 bits (80), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 5/108 (4%)
Query: 81 LTLGSNGFSGKISPSI-TKLKFLASLELQDNDLSGTLPDFLGSMTHLQSLNLANNKFSGS 139
L + N F P I T+L+ L L+L L P S++ LQ LN+++N F
Sbjct: 450 LKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSL 509
Query: 140 IPATWSQLSNLKHLDLSSNNL--TGRIPMQLF--SVATFNFTGTHLIC 183
+ L++L+ LD S N++ + + +Q F S+A N T C
Sbjct: 510 DTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 557
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 43/73 (58%), Gaps = 6/73 (8%)
Query: 272 NFSESNIIGQGGFGKVYKGVLSDNTK-VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNL 330
+++++ +IG G FG VY+ L D+ + VA+K++ G+A RE+ ++ H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----GKAFKNRELQIMRKLDHCNI 75
Query: 331 LQLIGYCTTSSER 343
++L + +S E+
Sbjct: 76 VRLRYFFYSSGEK 88
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 268 LATDNFSESNIIGQGGFGKVYKGVLS----DNTKVAVKRLQDYYSPGGEAAFQREVHLIS 323
+A ++ + I+G+G FG+VY+GV + + VAVK + + + F E ++
Sbjct: 21 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 80
Query: 324 VAIHKNLLQLIGYCTTSSERILV--YPF 349
H ++++LIG I++ YP+
Sbjct: 81 NLDHPHIVKLIGIIEEEPTWIIMELYPY 108
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 43/73 (58%), Gaps = 6/73 (8%)
Query: 272 NFSESNIIGQGGFGKVYKGVLSDNTK-VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNL 330
+++++ +IG G FG VY+ L D+ + VA+K++ G+A RE+ ++ H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----GKAFKNRELQIMRKLDHCNI 75
Query: 331 LQLIGYCTTSSER 343
++L + +S E+
Sbjct: 76 VRLRYFFYSSGEK 88
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 43/73 (58%), Gaps = 6/73 (8%)
Query: 272 NFSESNIIGQGGFGKVYKGVLSDNTK-VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNL 330
+++++ +IG G FG VY+ L D+ + VA+K++ G+A RE+ ++ H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----GKAFKNRELQIMRKLDHCNI 75
Query: 331 LQLIGYCTTSSER 343
++L + +S E+
Sbjct: 76 VRLRYFFYSSGEK 88
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 279 IGQGGFGKVYKGV-LSDNTKVAVKR-LQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 336
IGQG FG+V+K KVA+K+ L + G RE+ ++ + H+N++ LI
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 337 CTTSS 341
C T +
Sbjct: 86 CRTKA 90
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 279 IGQGGFGKVYKGV-LSDNTKVAVKR-LQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 336
IGQG FG+V+K KVA+K+ L + G RE+ ++ + H+N++ LI
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 337 CTTSS 341
C T +
Sbjct: 86 CRTKA 90
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 279 IGQGGFGKVYKGV-LSDNTKVAVKR-LQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 336
IGQG FG+V+K KVA+K+ L + G RE+ ++ + H+N++ LI
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 337 CTTSS 341
C T +
Sbjct: 86 CRTKA 90
>pdb|3UL9|A Chain A, Structure Of The Tv3 Mutant M41e
Length = 278
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 14/88 (15%)
Query: 76 GNVI-SLTLGSNGFSGKISPSITKLKFLASLELQDNDLSGTLPDF-LGSMTHLQSLNLAN 133
GN I SL LG+ FSG ++ L+ L ++E +L +F +G + L+ LN+A+
Sbjct: 86 GNPIQSLALGA--FSG-----LSSLQKLVAVETN----LASLENFPIGHLKTLKELNVAH 134
Query: 134 NKF-SGSIPATWSQLSNLKHLDLSSNNL 160
N S +P +S L+NL+HLDLSSN +
Sbjct: 135 NLIQSFKLPEYFSNLTNLEHLDLSSNKI 162
>pdb|2Z62|A Chain A, Crystal Structure Of The Tv3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z65|A Chain A, Crystal Structure Of The Human Tlr4 Tv3
Hybrid-Md-2-Eritoran Complex
pdb|2Z65|B Chain B, Crystal Structure Of The Human Tlr4 Tv3
Hybrid-Md-2-Eritoran Complex
Length = 276
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 14/88 (15%)
Query: 76 GNVI-SLTLGSNGFSGKISPSITKLKFLASLELQDNDLSGTLPDF-LGSMTHLQSLNLAN 133
GN I SL LG+ FSG ++ L+ L ++E +L +F +G + L+ LN+A+
Sbjct: 85 GNPIQSLALGA--FSG-----LSSLQKLVAVETN----LASLENFPIGHLKTLKELNVAH 133
Query: 134 NKF-SGSIPATWSQLSNLKHLDLSSNNL 160
N S +P +S L+NL+HLDLSSN +
Sbjct: 134 NLIQSFKLPEYFSNLTNLEHLDLSSNKI 161
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 268 LATDNFSESNIIGQGGFGKVYKGVLS----DNTKVAVKRLQDYYSPGGEAAFQREVHLIS 323
+A ++ + I+G+G FG+VY+GV + + VAVK + + + F E ++
Sbjct: 9 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 68
Query: 324 VAIHKNLLQLIGYCTTSSERILV--YPF 349
H ++++LIG I++ YP+
Sbjct: 69 NLDHPHIVKLIGIIEEEPTWIIMELYPY 96
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 14/88 (15%)
Query: 76 GNVI-SLTLGSNGFSGKISPSITKLKFLASLELQDNDLSGTLPDF-LGSMTHLQSLNLAN 133
GN I SL LG+ FSG ++ L+ L ++E +L +F +G + L+ LN+A+
Sbjct: 109 GNPIQSLALGA--FSG-----LSSLQKLVAVETN----LASLENFPIGHLKTLKELNVAH 157
Query: 134 NKF-SGSIPATWSQLSNLKHLDLSSNNL 160
N S +P +S L+NL+HLDLSSN +
Sbjct: 158 NLIQSFKLPEYFSNLTNLEHLDLSSNKI 185
Score = 35.4 bits (80), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 5/108 (4%)
Query: 81 LTLGSNGFSGKISPSI-TKLKFLASLELQDNDLSGTLPDFLGSMTHLQSLNLANNKFSGS 139
L + N F P I T+L+ L L+L L P S++ LQ LN+++N F
Sbjct: 474 LKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSL 533
Query: 140 IPATWSQLSNLKHLDLSSNNL--TGRIPMQLF--SVATFNFTGTHLIC 183
+ L++L+ LD S N++ + + +Q F S+A N T C
Sbjct: 534 DTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 581
>pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
pdb|3KJ4|D Chain D, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
Length = 286
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Query: 72 TCRNGNVISLTLGSNGFSGKISPSITKLKFLASLELQDN-DLSGTLPDFLGSMTHLQSLN 130
+CRN + L L SN +G + + T L L L+L DN L P + HL +L+
Sbjct: 53 SCRNLTI--LWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDPTTFRGLGHLHTLH 110
Query: 131 LANNKFSGSIPATWSQLSNLKHLDLSSNNL 160
L P + L+ L++L L NNL
Sbjct: 111 LDRCGLQELGPGLFRGLAALQYLYLQDNNL 140
>pdb|3ULA|A Chain A, Crystal Structure Of The Tv3 Mutant F63w-Md-2-Eritoran
Complex
pdb|3ULA|C Chain C, Crystal Structure Of The Tv3 Mutant F63w-Md-2-Eritoran
Complex
Length = 279
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 14/88 (15%)
Query: 76 GNVI-SLTLGSNGFSGKISPSITKLKFLASLELQDNDLSGTLPDF-LGSMTHLQSLNLAN 133
GN I SL LG+ FSG ++ L+ L ++E +L +F +G + L+ LN+A+
Sbjct: 87 GNPIQSLALGA--FSG-----LSSLQKLVAVETN----LASLENFPIGHLKTLKELNVAH 135
Query: 134 NKF-SGSIPATWSQLSNLKHLDLSSNNL 160
N S +P +S L+NL+HLDLSSN +
Sbjct: 136 NLIQSFKLPEYFSNLTNLEHLDLSSNKI 163
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 4/98 (4%)
Query: 276 SNIIGQGGFGKVYKGVLS----DNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 331
+IG G FG+V G L + VA+K L+ Y+ F E ++ H N++
Sbjct: 48 ERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVV 107
Query: 332 QLIGYCTTSSERILVYPFMQNLSVAYRLRVSHKIYTKI 369
L G T ++V FM+N ++ LR +T I
Sbjct: 108 HLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVI 145
>pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 570
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 14/88 (15%)
Query: 76 GNVI-SLTLGSNGFSGKISPSITKLKFLASLELQDNDLSGTLPDF-LGSMTHLQSLNLAN 133
GN I SL LG+ FSG ++ L+ L ++E +L +F +G + L+ LN+A+
Sbjct: 85 GNPIQSLALGA--FSG-----LSSLQKLVAVETN----LASLENFPIGHLKTLKELNVAH 133
Query: 134 NKF-SGSIPATWSQLSNLKHLDLSSNNL 160
N S +P +S L+NL+HLDLSSN +
Sbjct: 134 NLIQSFKLPEYFSNLTNLEHLDLSSNKI 161
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 81 LTLGSNGFSGKISPSI-TKLKFLASLELQDNDLSGTLPDFLGSMTHLQSLNLANNKFSGS 139
L + N F P I T+L+ L L+L L P S++ LQ LN+A+N+
Sbjct: 450 LKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSV 509
Query: 140 IPATWSQLSNLKHLDLSSN 158
+ +L++L+ + L +N
Sbjct: 510 PDGIFDRLTSLQKIWLHTN 528
>pdb|3UL7|A Chain A, Crystal Structure Of The Tv3 Mutant F63w
Length = 278
Score = 36.2 bits (82), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 14/88 (15%)
Query: 76 GNVI-SLTLGSNGFSGKISPSITKLKFLASLELQDNDLSGTLPDF-LGSMTHLQSLNLAN 133
GN I SL LG+ FSG ++ L+ L ++E +L +F +G + L+ LN+A+
Sbjct: 86 GNPIQSLALGA--FSG-----LSSLQKLVAVETN----LASLENFPIGHLKTLKELNVAH 134
Query: 134 NKF-SGSIPATWSQLSNLKHLDLSSNNL 160
N S +P +S L+NL+HLDLSSN +
Sbjct: 135 NLIQSFKLPEYFSNLTNLEHLDLSSNKI 162
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 36.2 bits (82), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
Query: 77 NVISLTLGSNGFSGKISPSITKLKFLASLELQDNDLSGTLPD-FLGSMTHLQSLNLANNK 135
N+ L L N + KL L L L +N L +LPD +T+L LNLA+N+
Sbjct: 86 NLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQ-SLPDGVFDKLTNLTYLNLAHNQ 144
Query: 136 FSGSIPATWSQLSNLKHLDLSSNNLTGRIPMQLFSVAT 173
+ +L+NL LDLS N L +P +F T
Sbjct: 145 LQSLPKGVFDKLTNLTELDLSYNQLQS-LPEGVFDKLT 181
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
Query: 279 IGQGGFGKVYKGVLSDNTKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 337
+G G G+V+ G + +TKVAVK L Q SP AF E +L+ H+ L++L Y
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLVRL--YA 75
Query: 338 TTSSERI-LVYPFMQNLSVAYRLRVSHKIYTKIISL 372
+ E I ++ +M+N S+ L+ I I L
Sbjct: 76 VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKL 111
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 13/89 (14%)
Query: 272 NFSE---SNIIGQGGFGKVYKGV-LSDNTKVAVKRLQDYYSPGGEAA-----FQREVHLI 322
+F+E IIG GGFGKVY+ + D V R + P + + ++E L
Sbjct: 5 DFAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAAR----HDPDEDISQTIENVRQEAKLF 60
Query: 323 SVAIHKNLLQLIGYCTTSSERILVYPFMQ 351
++ H N++ L G C LV F +
Sbjct: 61 AMLKHPNIIALRGVCLKEPNLCLVMEFAR 89
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 35.8 bits (81), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 11/105 (10%)
Query: 267 QLATDNFSESNIIGQGGFGKVYK----GVLSDNTK----VAVKRLQDYYSPGGEAAFQRE 318
+ D + +G+G FG+V G+ D K VAVK L+D + + E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 319 VHLIS-VAIHKNLLQLIGYCTTSSE--RILVYPFMQNLSVAYRLR 360
+ ++ + HKN++ L+G CT I+ Y NL R R
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRAR 135
>pdb|2ID5|A Chain A, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|B Chain B, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|C Chain C, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|D Chain D, Crystal Structure Of The Lingo-1 Ectodomain
Length = 477
Score = 35.8 bits (81), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 36/81 (44%)
Query: 81 LTLGSNGFSGKISPSITKLKFLASLELQDNDLSGTLPDFLGSMTHLQSLNLANNKFSGSI 140
L LG N L LEL +N +S P ++ +L++L L +N+
Sbjct: 37 LDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIP 96
Query: 141 PATWSQLSNLKHLDLSSNNLT 161
++ LSNL LD+S N +
Sbjct: 97 LGVFTGLSNLTKLDISENKIV 117
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 35.8 bits (81), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 6/106 (5%)
Query: 261 FSCRELQLATDNFSESNIIGQGGFGKVY----KGVLSD--NTKVAVKRLQDYYSPGGEAA 314
F E ++A + + S +GQG FG VY KGV+ D T+VA+K + + S
Sbjct: 6 FVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 65
Query: 315 FQREVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLR 360
F E ++ ++++L+G + +++ M + LR
Sbjct: 66 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLR 111
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 35.8 bits (81), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 16/111 (14%)
Query: 279 IGQGGFGKVYK---GVLSDNTK--VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQL 333
+G+G FG V L DNT VAVK+LQ + + F+RE+ ++ H N+++
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 334 IGYCTTSSER-------ILVYPFMQNLSVAYRLRVSHKIYTKIISLSSLHC 377
G C ++ R L Y +++ A+ R+ H K++ +S C
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDH---IKLLQYTSQIC 127
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 35.4 bits (80), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 36/72 (50%), Gaps = 13/72 (18%)
Query: 254 SLTQLRRFSCREL---QLATDNFSES--------NIIGQGGFGKVYKGV-LSDNTKVAVK 301
SL LR C +L +LA E ++G GGFG VY G+ +SDN VA+K
Sbjct: 9 SLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 68
Query: 302 RLQ-DYYSPGGE 312
++ D S GE
Sbjct: 69 HVEKDRISDWGE 80
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 35.4 bits (80), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 36/72 (50%), Gaps = 13/72 (18%)
Query: 254 SLTQLRRFSCREL---QLATDNFSES--------NIIGQGGFGKVYKGV-LSDNTKVAVK 301
SL LR C +L +LA E ++G GGFG VY G+ +SDN VA+K
Sbjct: 9 SLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 68
Query: 302 RLQ-DYYSPGGE 312
++ D S GE
Sbjct: 69 HVEKDRISDWGE 80
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 35.4 bits (80), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 36/72 (50%), Gaps = 13/72 (18%)
Query: 254 SLTQLRRFSCREL---QLATDNFSES--------NIIGQGGFGKVYKGV-LSDNTKVAVK 301
SL LR C +L +LA E ++G GGFG VY G+ +SDN VA+K
Sbjct: 8 SLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 67
Query: 302 RLQ-DYYSPGGE 312
++ D S GE
Sbjct: 68 HVEKDRISDWGE 79
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 35.4 bits (80), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 36/72 (50%), Gaps = 13/72 (18%)
Query: 254 SLTQLRRFSCREL---QLATDNFSES--------NIIGQGGFGKVYKGV-LSDNTKVAVK 301
SL LR C +L +LA E ++G GGFG VY G+ +SDN VA+K
Sbjct: 8 SLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 67
Query: 302 RLQ-DYYSPGGE 312
++ D S GE
Sbjct: 68 HVEKDRISDWGE 79
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 35.4 bits (80), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 36/72 (50%), Gaps = 13/72 (18%)
Query: 254 SLTQLRRFSCREL---QLATDNFSES--------NIIGQGGFGKVYKGV-LSDNTKVAVK 301
SL LR C +L +LA E ++G GGFG VY G+ +SDN VA+K
Sbjct: 8 SLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 67
Query: 302 RLQ-DYYSPGGE 312
++ D S GE
Sbjct: 68 HVEKDRISDWGE 79
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 35.4 bits (80), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 36/72 (50%), Gaps = 13/72 (18%)
Query: 254 SLTQLRRFSCREL---QLATDNFSES--------NIIGQGGFGKVYKGV-LSDNTKVAVK 301
SL LR C +L +LA E ++G GGFG VY G+ +SDN VA+K
Sbjct: 28 SLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 87
Query: 302 RLQ-DYYSPGGE 312
++ D S GE
Sbjct: 88 HVEKDRISDWGE 99
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 35.4 bits (80), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 271 DNFSESNIIGQGGFGKVYKGVLS-DNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAIHK 328
+NF + IG+G +G VYK VA+K+++ D + G + RE+ L+ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 329 NLLQLIGYCTTSSERILVY 347
N+++L+ T ++ LV+
Sbjct: 62 NIVKLLDVIHTENKLYLVF 80
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 35.4 bits (80), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 36/72 (50%), Gaps = 13/72 (18%)
Query: 254 SLTQLRRFSCREL---QLATDNFSES--------NIIGQGGFGKVYKGV-LSDNTKVAVK 301
SL LR C +L +LA E ++G GGFG VY G+ +SDN VA+K
Sbjct: 23 SLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 82
Query: 302 RLQ-DYYSPGGE 312
++ D S GE
Sbjct: 83 HVEKDRISDWGE 94
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 35.4 bits (80), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 36/72 (50%), Gaps = 13/72 (18%)
Query: 254 SLTQLRRFSCREL---QLATDNFSES--------NIIGQGGFGKVYKGV-LSDNTKVAVK 301
SL LR C +L +LA E ++G GGFG VY G+ +SDN VA+K
Sbjct: 9 SLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 68
Query: 302 RLQ-DYYSPGGE 312
++ D S GE
Sbjct: 69 HVEKDRISDWGE 80
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 36/72 (50%), Gaps = 13/72 (18%)
Query: 254 SLTQLRRFSCREL---QLATDNFSES--------NIIGQGGFGKVYKGV-LSDNTKVAVK 301
SL LR C +L +LA E ++G GGFG VY G+ +SDN VA+K
Sbjct: 8 SLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 67
Query: 302 RLQ-DYYSPGGE 312
++ D S GE
Sbjct: 68 HVEKDRISDWGE 79
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 36/72 (50%), Gaps = 13/72 (18%)
Query: 254 SLTQLRRFSCREL---QLATDNFSES--------NIIGQGGFGKVYKGV-LSDNTKVAVK 301
SL LR C +L +LA E ++G GGFG VY G+ +SDN VA+K
Sbjct: 9 SLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 68
Query: 302 RLQ-DYYSPGGE 312
++ D S GE
Sbjct: 69 HVEKDRISDWGE 80
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 265 ELQLATDNFSESNIIGQGGFGKVY----KGVLSD--NTKVAVKRLQDYYSPGGEAAFQRE 318
E ++A + + S +GQG FG VY KGV+ D T+VA+K + + S F E
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 63
Query: 319 VHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLR 360
++ ++++L+G + +++ M + LR
Sbjct: 64 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLR 105
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 35.4 bits (80), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 11/105 (10%)
Query: 267 QLATDNFSESNIIGQGGFGKVYK----GVLSDNTK----VAVKRLQDYYSPGGEAAFQRE 318
+ D + +G+G FG+V G+ D K VAVK L+D + + E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 319 VHLIS-VAIHKNLLQLIGYCTTSSE--RILVYPFMQNLSVAYRLR 360
+ ++ + HKN++ L+G CT I+ Y NL R R
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRAR 135
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 16/111 (14%)
Query: 279 IGQGGFGKVYK---GVLSDNTK--VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQL 333
+G+G FG V L DNT VAVK+LQ + + F+RE+ ++ H N+++
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKY 81
Query: 334 IGYCTTSSER-------ILVYPFMQNLSVAYRLRVSHKIYTKIISLSSLHC 377
G C ++ R L Y +++ ++ R+ H K++ +S C
Sbjct: 82 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH---IKLLQYTSQIC 129
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 16/111 (14%)
Query: 279 IGQGGFGKVYK---GVLSDNTK--VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQL 333
+G+G FG V L DNT VAVK+LQ + + F+RE+ ++ H N+++
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKY 107
Query: 334 IGYCTTSSER-------ILVYPFMQNLSVAYRLRVSHKIYTKIISLSSLHC 377
G C ++ R L Y +++ ++ R+ H K++ +S C
Sbjct: 108 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH---IKLLQYTSQIC 155
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 16/111 (14%)
Query: 279 IGQGGFGKV---YKGVLSDNTK--VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQL 333
+G+G FG V L DNT VAVK+LQ + + F+RE+ ++ H N+++
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKY 83
Query: 334 IGYCTTSSER-------ILVYPFMQNLSVAYRLRVSHKIYTKIISLSSLHC 377
G C ++ R L Y +++ ++ R+ H K++ +S C
Sbjct: 84 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH---IKLLQYTSQIC 131
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 61/135 (45%), Gaps = 15/135 (11%)
Query: 261 FSCRELQLATDNFSESNIIGQGGFGKVYK----GVLSDNTK--VAVKRLQDYYSPGGEAA 314
+ + + D + +G+G FG+V + G+ T VAVK L++ + A
Sbjct: 17 YDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRA 76
Query: 315 FQREVH-LISVAIHKNLLQLIGYCTTSSERILV---YPFMQNLSVAYRLR----VSHK-I 365
E+ LI + H N++ L+G CT ++V + NLS R + V +K +
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDL 136
Query: 366 YTKIISLSSLHCFSL 380
Y ++L L C+S
Sbjct: 137 YKDFLTLEHLICYSF 151
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 265 ELQLATDNFSESNIIGQGGFGKVY----KGVLSD--NTKVAVKRLQDYYSPGGEAAFQRE 318
E ++A + + S +GQG FG VY KGV+ D T+VA+K + + S F E
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 72
Query: 319 VHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLR 360
++ ++++L+G + +++ M + LR
Sbjct: 73 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLR 114
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 269 ATDNFSESNIIGQGGFGKVYKGVLS-DNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAI 326
+ +NF + IG+G +G VYK VA+K+++ D + G + RE+ L+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 327 HKNLLQLIGYCTTSSERILVY 347
H N+++L+ T ++ LV+
Sbjct: 64 HPNIVKLLDVIHTENKLYLVF 84
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 35.4 bits (80), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 16/111 (14%)
Query: 279 IGQGGFGKVYK---GVLSDNTK--VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQL 333
+G+G FG V L DNT VAVK+LQ + + F+RE+ ++ H N+++
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKY 82
Query: 334 IGYCTTSSER-------ILVYPFMQNLSVAYRLRVSHKIYTKIISLSSLHC 377
G C ++ R L Y +++ ++ R+ H K++ +S C
Sbjct: 83 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH---IKLLQYTSQIC 130
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 35.4 bits (80), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 36/72 (50%), Gaps = 13/72 (18%)
Query: 254 SLTQLRRFSCREL---QLATDNFSES--------NIIGQGGFGKVYKGV-LSDNTKVAVK 301
SL LR C +L +LA E ++G GGFG VY G+ +SDN VA+K
Sbjct: 23 SLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 82
Query: 302 RLQ-DYYSPGGE 312
++ D S GE
Sbjct: 83 HVEKDRISDWGE 94
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 35.4 bits (80), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 16/111 (14%)
Query: 279 IGQGGFGKVYK---GVLSDNTK--VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQL 333
+G+G FG V L DNT VAVK+LQ + + F+RE+ ++ H N+++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 334 IGYCTTSSER-------ILVYPFMQNLSVAYRLRVSHKIYTKIISLSSLHC 377
G C ++ R L Y +++ ++ R+ H K++ +S C
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH---IKLLQYTSQIC 124
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 35.4 bits (80), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 16/111 (14%)
Query: 279 IGQGGFGKVYK---GVLSDNTK--VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQL 333
+G+G FG V L DNT VAVK+LQ + + F+RE+ ++ H N+++
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 334 IGYCTTSSER-------ILVYPFMQNLSVAYRLRVSHKIYTKIISLSSLHC 377
G C ++ R L Y +++ ++ R+ H K++ +S C
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH---IKLLQYTSQIC 127
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 35.4 bits (80), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 16/111 (14%)
Query: 279 IGQGGFGKV---YKGVLSDNTK--VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQL 333
+G+G FG V L DNT VAVK+LQ + + F+RE+ ++ H N+++
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKY 75
Query: 334 IGYCTTSSER-------ILVYPFMQNLSVAYRLRVSHKIYTKIISLSSLHC 377
G C ++ R L Y +++ ++ R+ H K++ +S C
Sbjct: 76 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH---IKLLQYTSQIC 123
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 35.4 bits (80), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 16/111 (14%)
Query: 279 IGQGGFGKVYK---GVLSDNTK--VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQL 333
+G+G FG V L DNT VAVK+LQ + + F+RE+ ++ H N+++
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKY 74
Query: 334 IGYCTTSSER-------ILVYPFMQNLSVAYRLRVSHKIYTKIISLSSLHC 377
G C ++ R L Y +++ ++ R+ H K++ +S C
Sbjct: 75 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH---IKLLQYTSQIC 122
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 35.4 bits (80), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 16/111 (14%)
Query: 279 IGQGGFGKV---YKGVLSDNTK--VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQL 333
+G+G FG V L DNT VAVK+LQ + + F+RE+ ++ H N+++
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKY 80
Query: 334 IGYCTTSSER-------ILVYPFMQNLSVAYRLRVSHKIYTKIISLSSLHC 377
G C ++ R L Y +++ ++ R+ H K++ +S C
Sbjct: 81 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH---IKLLQYTSQIC 128
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 35.4 bits (80), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 16/111 (14%)
Query: 279 IGQGGFGKVYK---GVLSDNTK--VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQL 333
+G+G FG V L DNT VAVK+LQ + + F+RE+ ++ H N+++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 334 IGYCTTSSER-------ILVYPFMQNLSVAYRLRVSHKIYTKIISLSSLHC 377
G C ++ R L Y +++ ++ R+ H K++ +S C
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH---IKLLQYTSQIC 124
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 35.4 bits (80), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 16/111 (14%)
Query: 279 IGQGGFGKVYK---GVLSDNTK--VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQL 333
+G+G FG V L DNT VAVK+LQ + + F+RE+ ++ H N+++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 334 IGYCTTSSER-------ILVYPFMQNLSVAYRLRVSHKIYTKIISLSSLHC 377
G C ++ R L Y +++ ++ R+ H K++ +S C
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH---IKLLQYTSQIC 124
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 35.4 bits (80), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Query: 267 QLATDNFSESNIIGQGGFGKVYK----GVLSDNTK----VAVKRLQDYYSPGGEAAFQRE 318
+ D + +G+G FG+V G+ D K VAVK L+D + + E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 319 VHLIS-VAIHKNLLQLIGYCT 338
+ ++ + HKN++ L+G CT
Sbjct: 91 MEMMKMIGKHKNIINLLGACT 111
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 35.0 bits (79), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Query: 267 QLATDNFSESNIIGQGGFGKVYK----GVLSDNTK----VAVKRLQDYYSPGGEAAFQRE 318
+ D + +G+G FG+V G+ D K VAVK L+D + + E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 319 VHLIS-VAIHKNLLQLIGYCT 338
+ ++ + HKN++ L+G CT
Sbjct: 91 MEMMKMIGKHKNIIHLLGACT 111
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 35.0 bits (79), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 265 ELQLATDNFSESNIIGQGGFGKVY----KGVLSD--NTKVAVKRLQDYYSPGGEAAFQRE 318
E ++A + + S +GQG FG VY KGV+ D T+VA+K + + S F E
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 71
Query: 319 VHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLR 360
++ ++++L+G + +++ M + LR
Sbjct: 72 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLR 113
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 35.0 bits (79), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 265 ELQLATDNFSESNIIGQGGFGKVY----KGVLSD--NTKVAVKRLQDYYSPGGEAAFQRE 318
E ++A + + S +GQG FG VY KGV+ D T+VA+K + + S F E
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 319 VHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLR 360
++ ++++L+G + +++ M + LR
Sbjct: 66 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLR 107
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 35.0 bits (79), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 16/111 (14%)
Query: 279 IGQGGFGKV---YKGVLSDNTK--VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQL 333
+G+G FG V L DNT VAVK+LQ + + F+RE+ ++ H N+++
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 334 IGYCTTSSER-------ILVYPFMQNLSVAYRLRVSHKIYTKIISLSSLHC 377
G C ++ R L Y ++ ++ R+ H K++ +S C
Sbjct: 80 KGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDH---IKLLQYTSQIC 127
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 35.0 bits (79), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 16/111 (14%)
Query: 279 IGQGGFGKVYK---GVLSDNTK--VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQL 333
+G+G FG V L DNT VAVK+LQ + + F+RE+ ++ H N+++
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 334 IGYCTTSSER-------ILVYPFMQNLSVAYRLRVSHKIYTKIISLSSLHC 377
G C ++ R L Y +++ ++ R+ H K++ +S C
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH---IKLLQYTSQIC 142
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 35.0 bits (79), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 16/111 (14%)
Query: 279 IGQGGFGKVYK---GVLSDNTK--VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQL 333
+G+G FG V L DNT VAVK+LQ + + F+RE+ ++ H N+++
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 334 IGYCTTSSER-------ILVYPFMQNLSVAYRLRVSHKIYTKIISLSSLHC 377
G C ++ R L Y +++ ++ R+ H K++ +S C
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH---IKLLQYTSQIC 142
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 35.0 bits (79), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 58/138 (42%), Gaps = 18/138 (13%)
Query: 261 FSCRELQLATDNFSESNIIGQGGFGKVYK----GVLSDNT--KVAVKRLQDYYSPGGEAA 314
+ + + D + +G+G FG+V + G+ T VAVK L++ + A
Sbjct: 18 YDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 77
Query: 315 FQREVH-LISVAIHKNLLQLIGYCTTSSERILV---YPFMQNLSVAYR--------LRVS 362
E+ LI + H N++ L+G CT ++V + NLS R +
Sbjct: 78 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTP 137
Query: 363 HKIYTKIISLSSLHCFSL 380
+Y ++L L C+S
Sbjct: 138 EDLYKDFLTLEHLICYSF 155
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 35.0 bits (79), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 265 ELQLATDNFSESNIIGQGGFGKVY----KGVLSD--NTKVAVKRLQDYYSPGGEAAFQRE 318
E ++A + + S +GQG FG VY KGV+ D T+VA+K + + S F E
Sbjct: 9 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 68
Query: 319 VHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLR 360
++ ++++L+G + +++ M + LR
Sbjct: 69 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLR 110
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 35.0 bits (79), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 16/111 (14%)
Query: 279 IGQGGFGKV---YKGVLSDNTK--VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQL 333
+G+G FG V L DNT VAVK+LQ + + F+RE+ ++ H N+++
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKY 77
Query: 334 IGYCTTSSER-------ILVYPFMQNLSVAYRLRVSHKIYTKIISLSSLHC 377
G C ++ R L Y +++ ++ R+ H K++ +S C
Sbjct: 78 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH---IKLLQYTSQIC 125
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 35.0 bits (79), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 265 ELQLATDNFSESNIIGQGGFGKVY----KGVLSD--NTKVAVKRLQDYYSPGGEAAFQRE 318
E ++A + + S +GQG FG VY KGV+ D T+VA+K + + S F E
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 72
Query: 319 VHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLR 360
++ ++++L+G + +++ M + LR
Sbjct: 73 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLR 114
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 35.0 bits (79), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 40/72 (55%), Gaps = 7/72 (9%)
Query: 273 FSESNIIGQGGFGKVYKGVLSDNTKVAVKR-LQDYYSPGGEAAFQREVHLISVAIHKNLL 331
++ +IG G FG V++ L ++ +VA+K+ LQD + RE+ ++ + H N++
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQD------KRFKNRELQIMRIVKHPNVV 95
Query: 332 QLIGYCTTSSER 343
L + ++ ++
Sbjct: 96 DLKAFFYSNGDK 107
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 35.0 bits (79), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 11/105 (10%)
Query: 267 QLATDNFSESNIIGQGGFGKVYK----GVLSDNTK----VAVKRLQDYYSPGGEAAFQRE 318
+ D + +G+G FG+V G+ D K VAVK L+D + + E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 319 VHLIS-VAIHKNLLQLIGYCTTSSE--RILVYPFMQNLSVAYRLR 360
+ ++ + HKN++ L+G CT I+ Y NL R R
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRAR 135
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 35.0 bits (79), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 265 ELQLATDNFSESNIIGQGGFGKVY----KGVLSD--NTKVAVKRLQDYYSPGGEAAFQRE 318
E ++A + + S +GQG FG VY KGV+ D T+VA+K + + S F E
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 319 VHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLR 360
++ ++++L+G + +++ M + LR
Sbjct: 66 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLR 107
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 35.0 bits (79), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 4/96 (4%)
Query: 276 SNIIGQGGFGKVYKGVL----SDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 331
IIG G G+V G L + VA+K L+ Y+ F E ++ H N++
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 332 QLIGYCTTSSERILVYPFMQNLSVAYRLRVSHKIYT 367
+L G T ++V +M+N S+ LR +T
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFT 149
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 35.0 bits (79), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Query: 267 QLATDNFSESNIIGQGGFGKVYK----GVLSDNTK----VAVKRLQDYYSPGGEAAFQRE 318
+ D + +G+G FG+V G+ D K VAVK L+D + + E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 319 VHLIS-VAIHKNLLQLIGYCT 338
+ ++ + HKN++ L+G CT
Sbjct: 91 MEMMKMIGKHKNIINLLGACT 111
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 35.0 bits (79), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 265 ELQLATDNFSESNIIGQGGFGKVY----KGVLSD--NTKVAVKRLQDYYSPGGEAAFQRE 318
E ++A + + S +GQG FG VY KGV+ D T+VA+K + + S F E
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 71
Query: 319 VHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLR 360
++ ++++L+G + +++ M + LR
Sbjct: 72 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLR 113
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 35.0 bits (79), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 265 ELQLATDNFSESNIIGQGGFGKVY----KGVLSD--NTKVAVKRLQDYYSPGGEAAFQRE 318
E ++A + + S +GQG FG VY KGV+ D T+VA+K + + S F E
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 78
Query: 319 VHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLR 360
++ ++++L+G + +++ M + LR
Sbjct: 79 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLR 120
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 35.0 bits (79), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Query: 267 QLATDNFSESNIIGQGGFGKVYK----GVLSDNTK----VAVKRLQDYYSPGGEAAFQRE 318
+ D + +G+G FG+V G+ D K VAVK L+D + + E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 319 VHLIS-VAIHKNLLQLIGYCT 338
+ ++ + HKN++ L+G CT
Sbjct: 91 MEMMKMIGKHKNIINLLGACT 111
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 35.0 bits (79), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 279 IGQGGFGKVYKGV--LSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 336
+G+G + VYKG L+DN VA+K ++ + G REV L+ H N++ L
Sbjct: 10 LGEGTYATVYKGKSKLTDNL-VALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 68
Query: 337 CTTSSERILVYPFMQN 352
T LV+ ++
Sbjct: 69 IHTEKSLTLVFEYLDK 84
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 35.0 bits (79), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Query: 267 QLATDNFSESNIIGQGGFGKVYK----GVLSDNTK----VAVKRLQDYYSPGGEAAFQRE 318
+ D + +G+G FG+V G+ D K VAVK L+D + + E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSE 90
Query: 319 VHLIS-VAIHKNLLQLIGYCT 338
+ ++ + HKN++ L+G CT
Sbjct: 91 MEMMKMIGKHKNIINLLGACT 111
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 35.0 bits (79), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 265 ELQLATDNFSESNIIGQGGFGKVY----KGVLSD--NTKVAVKRLQDYYSPGGEAAFQRE 318
E ++A + + S +GQG FG VY KGV+ D T+VA+K + + S F E
Sbjct: 41 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 100
Query: 319 VHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLR 360
++ ++++L+G + +++ M + LR
Sbjct: 101 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLR 142
>pdb|2Z66|A Chain A, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|B Chain B, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|C Chain C, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|D Chain D, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 306
Score = 34.7 bits (78), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 5/108 (4%)
Query: 81 LTLGSNGFSGKISPSI-TKLKFLASLELQDNDLSGTLPDFLGSMTHLQSLNLANNKFSGS 139
L + N F P I T+L+ L L+L L P S++ LQ LN+++N F
Sbjct: 155 LKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSL 214
Query: 140 IPATWSQLSNLKHLDLSSNNL--TGRIPMQLF--SVATFNFTGTHLIC 183
+ L++L+ LD S N++ + + +Q F S+A N T C
Sbjct: 215 DTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 262
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 34.7 bits (78), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 265 ELQLATDNFSESNIIGQGGFGKVY----KGVLSD--NTKVAVKRLQDYYSPGGEAAFQRE 318
E ++A + + S +GQG FG VY KGV+ D T+VA+K + + S F E
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 78
Query: 319 VHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLR 360
++ ++++L+G + +++ M + LR
Sbjct: 79 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLR 120
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 34.7 bits (78), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 4/96 (4%)
Query: 276 SNIIGQGGFGKVYKGVL----SDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 331
IIG G G+V G L + VA+K L+ Y+ F E ++ H N++
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 332 QLIGYCTTSSERILVYPFMQNLSVAYRLRVSHKIYT 367
+L G T ++V +M+N S+ LR +T
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFT 149
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 34.7 bits (78), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Query: 267 QLATDNFSESNIIGQGGFGKVYK----GVLSDNTK----VAVKRLQDYYSPGGEAAFQRE 318
+ D + +G+G FG+V G+ D K VAVK L+D + + E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 319 VHLIS-VAIHKNLLQLIGYCT 338
+ ++ + HKN++ L+G CT
Sbjct: 91 MEMMKMIGKHKNIITLLGACT 111
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 34.7 bits (78), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
Query: 261 FSCRELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQR 317
++ Q A ++F +G+G FG VY + + A+K L G E +R
Sbjct: 1 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 60
Query: 318 EVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYR 358
EV + S H N+L+L GY ++ L+ + L YR
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP-LGTVYR 100
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 34.7 bits (78), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 279 IGQGGFGKV----YKGVLSDNT--KVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQ 332
+G+G FGKV Y +D T VAVK L++ P + +QRE+ ++ H+++++
Sbjct: 17 LGEGHFGKVSLYCYDPT-NDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVK 75
Query: 333 LIGYCTTSSER 343
G C E+
Sbjct: 76 YKGCCEDQGEK 86
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 34.7 bits (78), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 279 IGQGGFGKV----YKGVLSDNT--KVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQ 332
+G+G FGKV Y +D T VAVK L++ P + +QRE+ ++ H+++++
Sbjct: 16 LGEGHFGKVSLYCYDPT-NDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVK 74
Query: 333 LIGYCTTSSER 343
G C E+
Sbjct: 75 YKGCCEDQGEK 85
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 34.7 bits (78), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 277 NIIGQGGFGKVYKGVL--SDNT--KVAVKRLQ-DYYSPGGEAAFQREVHLISVAIHKNLL 331
I+G+G FG V +G L D T KVAVK ++ D S F E + H N++
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 332 QLIGYCTTSSER-----ILVYPFMQ 351
+L+G C S + +++ PFM+
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMK 124
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 34.7 bits (78), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 264 RELQLATDNFSESNIIGQGGFGKVYKGV-LSDNTKVAVKRLQ-DYYSPGGE 312
+E + + ++G GGFG VY G+ +SDN VA+K ++ D S GE
Sbjct: 16 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE 66
>pdb|4ECN|A Chain A, Crystal Structure Of A Leucine-Rich Repeat Protein
(Bt_0210) From Bacteroides Thetaiotaomicron Vpi-5482 At
2.80 A Resolution
Length = 876
Score = 34.7 bits (78), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 95 SITKLKFLASLELQDNDLSGTLPDFLGSMTHLQSLNLANNK--FSGSIPATWSQLSN 149
S + LK L +EL + LPDFL + LQSLN+A N+ + + A W++L++
Sbjct: 486 SWSNLKDLTDVELYNCPNXTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLAD 542
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 34.7 bits (78), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 264 RELQLATDNFSESNIIGQGGFGKVYKGV-LSDNTKVAVKRLQ-DYYSPGGE 312
+E + + ++G GGFG VY G+ +SDN VA+K ++ D S GE
Sbjct: 16 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE 66
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 34.7 bits (78), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
Query: 261 FSCRELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQR 317
++ Q A ++F +G+G FG VY + + A+K L G E +R
Sbjct: 1 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 60
Query: 318 EVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYR 358
EV + S H N+L+L GY ++ L+ + L YR
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP-LGTVYR 100
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 34.7 bits (78), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 264 RELQLATDNFSESNIIGQGGFGKVYKGV-LSDNTKVAVKRLQ-DYYSPGGE 312
+E + + ++G GGFG VY G+ +SDN VA+K ++ D S GE
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE 67
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 34.7 bits (78), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 264 RELQLATDNFSESNIIGQGGFGKVYKGV-LSDNTKVAVKRLQ-DYYSPGGE 312
+E + + ++G GGFG VY G+ +SDN VA+K ++ D S GE
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE 67
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 34.7 bits (78), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 264 RELQLATDNFSESNIIGQGGFGKVYKGV-LSDNTKVAVKRLQ-DYYSPGGE 312
+E + + ++G GGFG VY G+ +SDN VA+K ++ D S GE
Sbjct: 36 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE 86
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 34.7 bits (78), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
Query: 261 FSCRELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQR 317
++ Q A ++F +G+G FG VY + + A+K L G E +R
Sbjct: 1 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 60
Query: 318 EVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYR 358
EV + S H N+L+L GY ++ L+ + L YR
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP-LGTVYR 100
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 34.7 bits (78), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 264 RELQLATDNFSESNIIGQGGFGKVYKGV-LSDNTKVAVKRLQ-DYYSPGGE 312
+E + + ++G GGFG VY G+ +SDN VA+K ++ D S GE
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE 67
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 34.7 bits (78), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 4/98 (4%)
Query: 264 RELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQREVH 320
++ Q A ++F +G+G FG VY + + A+K L G E +REV
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 321 LISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYR 358
+ S H N+L+L GY ++ L+ + L YR
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAP-LGTVYR 98
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 34.7 bits (78), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 4/98 (4%)
Query: 264 RELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQREVH 320
++ Q A ++F +G+G FG VY + + A+K L G E +REV
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 321 LISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYR 358
+ S H N+L+L GY ++ L+ + L YR
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAP-LGTVYR 98
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 34.7 bits (78), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 4/98 (4%)
Query: 264 RELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQREVH 320
++ Q A ++F +G+G FG VY + + A+K L G E +REV
Sbjct: 1 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 321 LISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYR 358
+ S H N+L+L GY ++ L+ + L YR
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAP-LGTVYR 97
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 34.7 bits (78), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 264 RELQLATDNFSESNIIGQGGFGKVYKGV-LSDNTKVAVKRLQ-DYYSPGGE 312
+E + + ++G GGFG VY G+ +SDN VA+K ++ D S GE
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE 52
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 34.7 bits (78), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 264 RELQLATDNFSESNIIGQGGFGKVYKGV-LSDNTKVAVKRLQ-DYYSPGGE 312
+E + + ++G GGFG VY G+ +SDN VA+K ++ D S GE
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE 52
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 34.7 bits (78), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 4/98 (4%)
Query: 264 RELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQREVH 320
++ Q A ++F +G+G FG VY + + A+K L G E +REV
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 321 LISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYR 358
+ S H N+L+L GY ++ L+ + L YR
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAP-LGTVYR 102
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 34.7 bits (78), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 264 RELQLATDNFSESNIIGQGGFGKVYKGV-LSDNTKVAVKRLQ-DYYSPGGE 312
+E + + ++G GGFG VY G+ +SDN VA+K ++ D S GE
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE 51
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 264 RELQLATDNFSESNIIGQGGFGKVYKGV-LSDNTKVAVKRLQ-DYYSPGGE 312
+E + + ++G GGFG VY G+ +SDN VA+K ++ D S GE
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE 51
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
Query: 261 FSCRELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQR 317
++ Q A ++F +G+G FG VY + + A+K L G E +R
Sbjct: 1 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 60
Query: 318 EVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYR 358
EV + S H N+L+L GY ++ L+ + L YR
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP-LGTVYR 100
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 264 RELQLATDNFSESNIIGQGGFGKVYKGV-LSDNTKVAVKRLQ-DYYSPGGE 312
+E + + ++G GGFG VY G+ +SDN VA+K ++ D S GE
Sbjct: 24 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE 74
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
Query: 261 FSCRELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQR 317
++ Q A ++F +G+G FG VY + + A+K L G E +R
Sbjct: 3 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 62
Query: 318 EVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYR 358
EV + S H N+L+L GY ++ L+ + L YR
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP-LGTVYR 102
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 4/100 (4%)
Query: 262 SCRELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQRE 318
++ Q A ++F +G+G FG VY + + A+K L G E +RE
Sbjct: 1 ESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 60
Query: 319 VHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYR 358
V + S H N+L+L GY ++ L+ + L YR
Sbjct: 61 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAP-LGTVYR 99
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 4/100 (4%)
Query: 262 SCRELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQRE 318
++ Q A ++F +G+G FG VY + + A+K L G E +RE
Sbjct: 4 ESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 63
Query: 319 VHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYR 358
V + S H N+L+L GY ++ L+ + L YR
Sbjct: 64 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAP-LGTVYR 102
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 19/139 (13%)
Query: 261 FSCRELQLATDNFSESNIIGQGGFGKVYK----GVLSDNT--KVAVKRLQDYYSPGGEAA 314
+ + + D +G+G FG+V + G+ T VAVK L++ + A
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 76
Query: 315 FQREVH-LISVAIHKNLLQLIGYCTTSSERILV---YPFMQNLSVAYRLR----VSHKI- 365
E+ LI + H N++ L+G CT ++V + NLS R + V +K+
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 136
Query: 366 ----YTKIISLSSLHCFSL 380
Y ++L L C+S
Sbjct: 137 PEDLYKDFLTLEHLICYSF 155
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 267 QLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQREVHLIS 323
Q A ++F +G+G FG VY + + A+K L G E +REV + S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 324 VAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYR 358
H N+L+L GY ++ L+ + L YR
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAP-LGTVYR 97
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 4/100 (4%)
Query: 262 SCRELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQRE 318
++ Q A ++F +G+G FG VY + + A+K L G E +RE
Sbjct: 1 ESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 60
Query: 319 VHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYR 358
V + S H N+L+L GY ++ L+ + L YR
Sbjct: 61 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAP-LGTVYR 99
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 264 RELQLATDNFSESNIIGQGGFGKVYKGV-LSDNTKVAVKRLQ-DYYSPGGE 312
+E + + ++G GGFG VY G+ +SDN VA+K ++ D S GE
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE 52
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 267 QLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQREVHLIS 323
Q A ++F +G+G FG VY + + A+K L G E +REV + S
Sbjct: 3 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 62
Query: 324 VAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYR 358
H N+L+L GY ++ L+ + L YR
Sbjct: 63 HLRHPNILRLYGYFHDATRVYLILEYAP-LGTVYR 96
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 4/95 (4%)
Query: 267 QLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQREVHLIS 323
Q A ++F +G+G FG VY + A+K L G E +REV + S
Sbjct: 1 QWALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQS 60
Query: 324 VAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYR 358
H N+L+L GY ++ L+ + L YR
Sbjct: 61 HLRHPNILRLYGYFHDATRVYLILEYAP-LGTVYR 94
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 267 QLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQREVHLIS 323
Q A ++F +G+G FG VY + + A+K L G E +REV + S
Sbjct: 8 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 67
Query: 324 VAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYR 358
H N+L+L GY ++ L+ + L YR
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAP-LGTVYR 101
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 267 QLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQREVHLIS 323
Q A ++F +G+G FG VY + + A+K L G E +REV + S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 324 VAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYR 358
H N+L+L GY ++ L+ + L YR
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAP-LGTVYR 97
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 6/64 (9%)
Query: 276 SNIIGQGGFGKVYKGVLSDNT--KVAVKRLQDYYS---PGGEAAFQREVHLISVAIHKNL 330
+++G+G +GKV K VL T + AVK L+ P GEA ++E+ L+ HKN+
Sbjct: 10 GDLLGEGSYGKV-KEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNV 68
Query: 331 LQLI 334
+QL+
Sbjct: 69 IQLV 72
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 267 QLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQREVHLIS 323
Q A ++F +G+G FG VY + + A+K L G E +REV + S
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 324 VAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYR 358
H N+L+L GY ++ L+ + L YR
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAP-LGTVYR 100
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 267 QLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQREVHLIS 323
Q A ++F +G+G FG VY + + A+K L G E +REV + S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 324 VAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYR 358
H N+L+L GY ++ L+ + L YR
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAP-LGTVYR 97
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 267 QLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQREVHLIS 323
Q A ++F +G+G FG VY + + A+K L G E +REV + S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 324 VAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYR 358
H N+L+L GY ++ L+ + L YR
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAP-LGTVYR 97
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 267 QLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQREVHLIS 323
Q A ++F +G+G FG VY + + A+K L G E +REV + S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 324 VAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYR 358
H N+L+L GY ++ L+ + L YR
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAP-LGTVYR 97
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 4/98 (4%)
Query: 264 RELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQREVH 320
++ Q A ++F +G+G FG VY + + A+K L G E +REV
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 321 LISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYR 358
+ S H N+L+L GY ++ L+ + L YR
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAP-LGTVYR 98
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 267 QLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQREVHLIS 323
Q A ++F +G+G FG VY + + A+K L G E +REV + S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 324 VAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYR 358
H N+L+L GY ++ L+ + L YR
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAP-LGTVYR 97
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 19/139 (13%)
Query: 261 FSCRELQLATDNFSESNIIGQGGFGKVYK----GVLSDNT--KVAVKRLQDYYSPGGEAA 314
+ + + D +G+G FG+V + G+ T VAVK L++ + A
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 76
Query: 315 FQREVH-LISVAIHKNLLQLIGYCTTSSERILV---YPFMQNLSVAYRLR----VSHKI- 365
E+ LI + H N++ L+G CT ++V + NLS R + V +K+
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 136
Query: 366 ----YTKIISLSSLHCFSL 380
Y ++L L C+S
Sbjct: 137 PEDLYKDFLTLEHLICYSF 155
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 19/139 (13%)
Query: 261 FSCRELQLATDNFSESNIIGQGGFGKVYK----GVLSDNT--KVAVKRLQDYYSPGGEAA 314
+ + + D +G+G FG+V + G+ T VAVK L++ + A
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 76
Query: 315 FQREVH-LISVAIHKNLLQLIGYCTTSSERILV---YPFMQNLSVAYRLR----VSHKI- 365
E+ LI + H N++ L+G CT ++V + NLS R + V +K+
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 136
Query: 366 ----YTKIISLSSLHCFSL 380
Y ++L L C+S
Sbjct: 137 PEDLYKDFLTLEHLICYSF 155
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 4/100 (4%)
Query: 262 SCRELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQRE 318
++ Q A ++F +G+G FG VY + + A+K L G E +RE
Sbjct: 25 ESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 84
Query: 319 VHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYR 358
V + S H N+L+L GY ++ L+ + L YR
Sbjct: 85 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAP-LGTVYR 123
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 267 QLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQREVHLIS 323
Q A ++F +G+G FG VY + + A+K L G E +REV + S
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 324 VAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYR 358
H N+L+L GY ++ L+ + L YR
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAP-LGTVYR 100
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 54/117 (46%), Gaps = 5/117 (4%)
Query: 246 AGEDDCKVSL-TQLRRFSCRELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL 303
A E++ + L ++ + ++ Q A ++F +G+G FG VY + + A+K L
Sbjct: 8 APENNPEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL 67
Query: 304 --QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYR 358
G E +REV + S H N+L+L GY ++ L+ + L YR
Sbjct: 68 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP-LGTVYR 123
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 4/100 (4%)
Query: 262 SCRELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQRE 318
++ Q A ++F +G+G FG VY + + A+K L G E +RE
Sbjct: 16 ESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 75
Query: 319 VHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYR 358
V + S H N+L+L GY ++ L+ + L YR
Sbjct: 76 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAP-LGTVYR 114
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 19/139 (13%)
Query: 261 FSCRELQLATDNFSESNIIGQGGFGKVYK----GVLSDNT--KVAVKRLQDYYSPGGEAA 314
+ + + D +G+G FG+V + G+ T VAVK L++ + A
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 315 FQREVH-LISVAIHKNLLQLIGYCTTSSERILV---YPFMQNLSVAYRLR----VSHKI- 365
E+ LI + H N++ L+G CT ++V + NLS R + V +K+
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVA 127
Query: 366 ----YTKIISLSSLHCFSL 380
Y ++L L C+S
Sbjct: 128 PEDLYKDFLTLEHLICYSF 146
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 19/139 (13%)
Query: 261 FSCRELQLATDNFSESNIIGQGGFGKVYK----GVLSDNT--KVAVKRLQDYYSPGGEAA 314
+ + + D +G+G FG+V + G+ T VAVK L++ + A
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 315 FQREVH-LISVAIHKNLLQLIGYCTTSSERILV---YPFMQNLSVAYRLR----VSHKI- 365
E+ LI + H N++ L+G CT ++V + NLS R + V +K+
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVA 127
Query: 366 ----YTKIISLSSLHCFSL 380
Y ++L L C+S
Sbjct: 128 PEDLYKDFLTLEHLICYSF 146
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 19/139 (13%)
Query: 261 FSCRELQLATDNFSESNIIGQGGFGKVYK----GVLSDNT--KVAVKRLQDYYSPGGEAA 314
+ + + D +G+G FG+V + G+ T VAVK L++ + A
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 315 FQREVH-LISVAIHKNLLQLIGYCTTSSERILV---YPFMQNLSVAYRLR----VSHKI- 365
E+ LI + H N++ L+G CT ++V + NLS R + V +K+
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 127
Query: 366 ----YTKIISLSSLHCFSL 380
Y ++L L C+S
Sbjct: 128 PEDLYKDFLTLEHLICYSF 146
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 278 IIGQGGFGKVYKGV-LSDNTKVAVKRLQ-DYYSPGGE 312
++G GGFG VY G+ +SDN VA+K ++ D S GE
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE 47
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 19/139 (13%)
Query: 261 FSCRELQLATDNFSESNIIGQGGFGKVYK----GVLSDNT--KVAVKRLQDYYSPGGEAA 314
+ + + D +G+G FG+V + G+ T VAVK L++ + A
Sbjct: 54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 113
Query: 315 FQREVH-LISVAIHKNLLQLIGYCTTSSERILV---YPFMQNLSVAYRLR----VSHKI- 365
E+ LI + H N++ L+G CT ++V + NLS R + V +K+
Sbjct: 114 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 173
Query: 366 ----YTKIISLSSLHCFSL 380
Y ++L L C+S
Sbjct: 174 PEDLYKDFLTLEHLICYSF 192
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 278 IIGQGGFGKVYKGV-LSDNTKVAVKRLQ-DYYSPGGE 312
++G GGFG VY G+ +SDN VA+K ++ D S GE
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE 47
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 278 IIGQGGFGKVYKGV-LSDNTKVAVKRLQ-DYYSPGGE 312
++G GGFG VY G+ +SDN VA+K ++ D S GE
Sbjct: 14 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE 50
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Query: 267 QLATDNFSESNIIGQGGFGKVYK----GVLSDNTK----VAVKRLQDYYSPGGEAAFQRE 318
+ D + +G+G FG+V G+ D K VAVK L+D + + E
Sbjct: 77 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 136
Query: 319 VHLIS-VAIHKNLLQLIGYCT 338
+ ++ + HKN++ L+G CT
Sbjct: 137 MEMMKMIGKHKNIINLLGACT 157
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 278 IIGQGGFGKVYKGV-LSDNTKVAVKRLQ-DYYSPGGE 312
++G GGFG VY G+ +SDN VA+K ++ D S GE
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE 47
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 19/139 (13%)
Query: 261 FSCRELQLATDNFSESNIIGQGGFGKVYK----GVLSDNT--KVAVKRLQDYYSPGGEAA 314
+ + + D +G+G FG+V + G+ T VAVK L++ + A
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 315 FQREVH-LISVAIHKNLLQLIGYCTTSSERILV---YPFMQNLSVAYRLR----VSHKI- 365
E+ LI + H N++ L+G CT ++V + NLS R + V +K+
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVA 127
Query: 366 ----YTKIISLSSLHCFSL 380
Y ++L L C+S
Sbjct: 128 PEDLYKDFLTLEHLICYSF 146
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 43/74 (58%), Gaps = 8/74 (10%)
Query: 272 NFSESNIIGQGGFGKVYKGVLSDNTK-VAVKR-LQDYYSPGGEAAFQREVHLISVAIHKN 329
+++++ +IG G FG VY+ L D+ + VA+K+ LQD + RE+ ++ H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCN 74
Query: 330 LLQLIGYCTTSSER 343
+++L + +S E+
Sbjct: 75 IVRLRYFFYSSGEK 88
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 43/74 (58%), Gaps = 8/74 (10%)
Query: 272 NFSESNIIGQGGFGKVYKGVLSDNTK-VAVKR-LQDYYSPGGEAAFQREVHLISVAIHKN 329
+++++ +IG G FG VY+ L D+ + VA+K+ LQD + RE+ ++ H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCN 74
Query: 330 LLQLIGYCTTSSER 343
+++L + +S E+
Sbjct: 75 IVRLRYFFYSSGEK 88
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 43/74 (58%), Gaps = 8/74 (10%)
Query: 272 NFSESNIIGQGGFGKVYKGVLSDNTK-VAVKR-LQDYYSPGGEAAFQREVHLISVAIHKN 329
+++++ +IG G FG VY+ L D+ + VA+K+ LQD + RE+ ++ H N
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCN 75
Query: 330 LLQLIGYCTTSSER 343
+++L + +S E+
Sbjct: 76 IVRLRYFFYSSGEK 89
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 43/74 (58%), Gaps = 8/74 (10%)
Query: 272 NFSESNIIGQGGFGKVYKGVLSDNTK-VAVKR-LQDYYSPGGEAAFQREVHLISVAIHKN 329
+++++ +IG G FG VY+ L D+ + VA+K+ LQD + RE+ ++ H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCN 74
Query: 330 LLQLIGYCTTSSER 343
+++L + +S E+
Sbjct: 75 IVRLRYFFYSSGEK 88
>pdb|3ZYJ|A Chain A, Netring1 In Complex With Ngl1
pdb|3ZYJ|C Chain C, Netring1 In Complex With Ngl1
Length = 440
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 94 PSITKLKFLASLELQDNDLSGTLPDFLGSMTHLQSLNLANNKFSGSIPATWSQLSNLKHL 153
P++T L L L+L N LS P + HLQ L + ++ + L +L +
Sbjct: 201 PNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEI 260
Query: 154 DLSSNNLTGRIPMQLFS 170
+L+ NNLT +P LF+
Sbjct: 261 NLAHNNLT-LLPHDLFT 276
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 264 RELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGE--AAFQREVHL 321
+E + + +IG+G FG+VY G + +VA+ RL D + AF+REV
Sbjct: 26 QEWDIPFEQLEIGELIGKGRFGQVYHGRW--HGEVAI-RLIDIERDNEDQLKAFKREVMA 82
Query: 322 ISVAIHKNLLQLIGYCTT 339
H+N++ +G C +
Sbjct: 83 YRQTRHENVVLFMGACMS 100
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 43/74 (58%), Gaps = 8/74 (10%)
Query: 272 NFSESNIIGQGGFGKVYKGVLSDNTK-VAVKR-LQDYYSPGGEAAFQREVHLISVAIHKN 329
+++++ +IG G FG VY+ L D+ + VA+K+ LQD + RE+ ++ H N
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCN 86
Query: 330 LLQLIGYCTTSSER 343
+++L + +S E+
Sbjct: 87 IVRLRYFFYSSGEK 100
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 43/74 (58%), Gaps = 8/74 (10%)
Query: 272 NFSESNIIGQGGFGKVYKGVLSDNTK-VAVKR-LQDYYSPGGEAAFQREVHLISVAIHKN 329
+++++ +IG G FG VY+ L D+ + VA+K+ LQD + RE+ ++ H N
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCN 78
Query: 330 LLQLIGYCTTSSER 343
+++L + +S E+
Sbjct: 79 IVRLRYFFYSSGEK 92
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 43/74 (58%), Gaps = 8/74 (10%)
Query: 272 NFSESNIIGQGGFGKVYKGVLSDNTK-VAVKR-LQDYYSPGGEAAFQREVHLISVAIHKN 329
+++++ +IG G FG VY+ L D+ + VA+K+ LQD + RE+ ++ H N
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCN 87
Query: 330 LLQLIGYCTTSSER 343
+++L + +S E+
Sbjct: 88 IVRLRYFFYSSGEK 101
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 11/105 (10%)
Query: 267 QLATDNFSESNIIGQGGFGKVYK----GVLSDNTK----VAVKRLQDYYSPGGEAAFQRE 318
+ D + +G+G FG+V G+ D K VAVK L+D + + E
Sbjct: 23 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 82
Query: 319 VHLIS-VAIHKNLLQLIGYCTTSSE--RILVYPFMQNLSVAYRLR 360
+ ++ + HKN++ L+G CT I+ Y NL R R
Sbjct: 83 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRAR 127
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 43/74 (58%), Gaps = 8/74 (10%)
Query: 272 NFSESNIIGQGGFGKVYKGVLSDNTK-VAVKR-LQDYYSPGGEAAFQREVHLISVAIHKN 329
+++++ +IG G FG VY+ L D+ + VA+K+ LQD + RE+ ++ H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCN 74
Query: 330 LLQLIGYCTTSSER 343
+++L + +S E+
Sbjct: 75 IVRLRYFFYSSGEK 88
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 43/74 (58%), Gaps = 8/74 (10%)
Query: 272 NFSESNIIGQGGFGKVYKGVLSDNTK-VAVKR-LQDYYSPGGEAAFQREVHLISVAIHKN 329
+++++ +IG G FG VY+ L D+ + VA+K+ LQD + RE+ ++ H N
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCN 79
Query: 330 LLQLIGYCTTSSER 343
+++L + +S E+
Sbjct: 80 IVRLRYFFYSSGEK 93
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 43/74 (58%), Gaps = 8/74 (10%)
Query: 272 NFSESNIIGQGGFGKVYKGVLSDNTK-VAVKR-LQDYYSPGGEAAFQREVHLISVAIHKN 329
+++++ +IG G FG VY+ L D+ + VA+K+ LQD + RE+ ++ H N
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCN 93
Query: 330 LLQLIGYCTTSSER 343
+++L + +S E+
Sbjct: 94 IVRLRYFFYSSGEK 107
>pdb|3TWI|D Chain D, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
pdb|3TWI|E Chain E, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
pdb|3TWI|F Chain F, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
Length = 179
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 105 LELQDNDLSGTLPDFLGSMTHLQSLNLANNKFSGSIPATWSQLSNLKHLDLSSNNLTGRI 164
L L N ++ P S+T L LNLA N+ + + +L+ L HL L N L I
Sbjct: 45 LHLYINQITKLEPGVFDSLTQLTYLNLAVNQLTALPVGVFDKLTKLTHLALHINQLKS-I 103
Query: 165 PMQLF 169
PM +F
Sbjct: 104 PMGVF 108
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 11/105 (10%)
Query: 267 QLATDNFSESNIIGQGGFGKVYK----GVLSDNTK----VAVKRLQDYYSPGGEAAFQRE 318
+ D + +G+G FG+V G+ D K VAVK L+D + + E
Sbjct: 20 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 79
Query: 319 VHLIS-VAIHKNLLQLIGYCTTSSE--RILVYPFMQNLSVAYRLR 360
+ ++ + HKN++ L+G CT I+ Y NL R R
Sbjct: 80 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRAR 124
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 43/74 (58%), Gaps = 8/74 (10%)
Query: 272 NFSESNIIGQGGFGKVYKGVLSDNTK-VAVKR-LQDYYSPGGEAAFQREVHLISVAIHKN 329
+++++ +IG G FG VY+ L D+ + VA+K+ LQD + RE+ ++ H N
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCN 82
Query: 330 LLQLIGYCTTSSER 343
+++L + +S E+
Sbjct: 83 IVRLRYFFYSSGEK 96
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Query: 267 QLATDNFSESNIIGQGGFGKVYK----GVLSDNTK----VAVKRLQDYYSPGGEAAFQRE 318
+ D + +G+G FG+V G+ D K VAVK L+D + + E
Sbjct: 18 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 77
Query: 319 VHLIS-VAIHKNLLQLIGYCT 338
+ ++ + HKN++ L+G CT
Sbjct: 78 MEMMKMIGKHKNIINLLGACT 98
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 43/74 (58%), Gaps = 8/74 (10%)
Query: 272 NFSESNIIGQGGFGKVYKGVLSDNTK-VAVKR-LQDYYSPGGEAAFQREVHLISVAIHKN 329
+++++ +IG G FG VY+ L D+ + VA+K+ LQD + RE+ ++ H N
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCN 102
Query: 330 LLQLIGYCTTSSER 343
+++L + +S E+
Sbjct: 103 IVRLRYFFYSSGEK 116
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 43/74 (58%), Gaps = 8/74 (10%)
Query: 272 NFSESNIIGQGGFGKVYKGVLSDNTK-VAVKR-LQDYYSPGGEAAFQREVHLISVAIHKN 329
+++++ +IG G FG VY+ L D+ + VA+K+ LQD + RE+ ++ H N
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCN 108
Query: 330 LLQLIGYCTTSSER 343
+++L + +S E+
Sbjct: 109 IVRLRYFFYSSGEK 122
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 43/74 (58%), Gaps = 8/74 (10%)
Query: 272 NFSESNIIGQGGFGKVYKGVLSDNTK-VAVKR-LQDYYSPGGEAAFQREVHLISVAIHKN 329
+++++ +IG G FG VY+ L D+ + VA+K+ LQD + RE+ ++ H N
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCN 108
Query: 330 LLQLIGYCTTSSER 343
+++L + +S E+
Sbjct: 109 IVRLRYFFYSSGEK 122
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 43/74 (58%), Gaps = 8/74 (10%)
Query: 272 NFSESNIIGQGGFGKVYKGVLSDNTK-VAVKR-LQDYYSPGGEAAFQREVHLISVAIHKN 329
+++++ +IG G FG VY+ L D+ + VA+K+ LQD + RE+ ++ H N
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCN 86
Query: 330 LLQLIGYCTTSSER 343
+++L + +S E+
Sbjct: 87 IVRLRYFFYSSGEK 100
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 43/74 (58%), Gaps = 8/74 (10%)
Query: 272 NFSESNIIGQGGFGKVYKGVLSDNTK-VAVKR-LQDYYSPGGEAAFQREVHLISVAIHKN 329
+++++ +IG G FG VY+ L D+ + VA+K+ LQD + RE+ ++ H N
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCN 153
Query: 330 LLQLIGYCTTSSER 343
+++L + +S E+
Sbjct: 154 IVRLRYFFYSSGEK 167
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 43/74 (58%), Gaps = 8/74 (10%)
Query: 272 NFSESNIIGQGGFGKVYKGVLSDNTK-VAVKR-LQDYYSPGGEAAFQREVHLISVAIHKN 329
+++++ +IG G FG VY+ L D+ + VA+K+ LQD + RE+ ++ H N
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCN 110
Query: 330 LLQLIGYCTTSSER 343
+++L + +S E+
Sbjct: 111 IVRLRYFFYSSGEK 124
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 43/74 (58%), Gaps = 8/74 (10%)
Query: 272 NFSESNIIGQGGFGKVYKGVLSDNTK-VAVKR-LQDYYSPGGEAAFQREVHLISVAIHKN 329
+++++ +IG G FG VY+ L D+ + VA+K+ LQD + RE+ ++ H N
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCN 112
Query: 330 LLQLIGYCTTSSER 343
+++L + +S E+
Sbjct: 113 IVRLRYFFYSSGEK 126
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 19/139 (13%)
Query: 261 FSCRELQLATDNFSESNIIGQGGFGKVYK----GVLSDNT--KVAVKRLQDYYSPGGEAA 314
+ + + D +G+G FG+V + G+ T VAVK L++ + A
Sbjct: 19 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 78
Query: 315 FQREVH-LISVAIHKNLLQLIGYCTTSSERILV---YPFMQNLSVAYRLR----VSHK-- 364
E+ LI + H N++ L+G CT ++V + NLS R + V +K
Sbjct: 79 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEA 138
Query: 365 ---IYTKIISLSSLHCFSL 380
+Y ++L L C+S
Sbjct: 139 PEDLYKDFLTLEHLICYSF 157
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Query: 261 FSCRELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQR 317
++ Q A ++F +G+G FG VY + + A+K L G E +R
Sbjct: 3 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 62
Query: 318 EVHLISVAIHKNLLQLIGYCTTSSERILVYPF 349
EV + S H N+L+L GY ++ L+ +
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEY 94
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 264 RELQLATDNFSESNIIGQGGFGKVYK----GVLSDNT--KVAVKRLQDYYSPGGEAAFQR 317
+ + +N +G G FGKV + G+ ++ KVAVK L+ + A
Sbjct: 24 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 83
Query: 318 EVHLIS-VAIHKNLLQLIGYCTTSSERILV 346
E+ ++S + H+N++ L+G CT +++
Sbjct: 84 ELKIMSHLGQHENIVNLLGACTHGGPVLVI 113
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Query: 272 NFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 331
+F E +IG GGFG+V+K + K V R Y + E REV ++ H N++
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAE----REVKALAKLDHVNIV 68
Query: 332 QLIG 335
G
Sbjct: 69 HYNG 72
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Query: 261 FSCRELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQR 317
++ Q A ++F +G+G FG VY + + A+K L G E +R
Sbjct: 3 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 62
Query: 318 EVHLISVAIHKNLLQLIGYCTTSSERILVYPF 349
EV + S H N+L+L GY ++ L+ +
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEY 94
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Query: 267 QLATDNFSESNIIGQGGFGKVY----KGVLSDN----TKVAVKRLQDYYSPGGEAAFQRE 318
+L D +G+G FG+V G+ D TKVAVK L+ + + E
Sbjct: 24 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 83
Query: 319 VHLIS-VAIHKNLLQLIGYCT 338
+ ++ + HKN++ L+G CT
Sbjct: 84 MEMMKMIGKHKNIINLLGACT 104
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 264 RELQLATDNFSESNIIGQGGFGKVYK----GVLSDNT--KVAVKRLQDYYSPGGEAAFQR 317
+ + +N +G G FGKV + G+ ++ KVAVK L+ + A
Sbjct: 31 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 90
Query: 318 EVHLIS-VAIHKNLLQLIGYCTTSSERILVYPF 349
E+ ++S + H+N++ L+G CT +++ +
Sbjct: 91 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEY 123
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 264 RELQLATDNFSESNIIGQGGFGKVYK----GVLSDNT--KVAVKRLQDYYSPGGEAAFQR 317
+ + +N +G G FGKV + G+ ++ KVAVK L+ + A
Sbjct: 39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 98
Query: 318 EVHLIS-VAIHKNLLQLIGYCT 338
E+ ++S + H+N++ L+G CT
Sbjct: 99 ELKIMSHLGQHENIVNLLGACT 120
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 264 RELQLATDNFSESNIIGQGGFGKVYK----GVLSDNT--KVAVKRLQDYYSPGGEAAFQR 317
+ + +N +G G FGKV + G+ ++ KVAVK L+ + A
Sbjct: 39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 98
Query: 318 EVHLIS-VAIHKNLLQLIGYCT 338
E+ ++S + H+N++ L+G CT
Sbjct: 99 ELKIMSHLGQHENIVNLLGACT 120
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 264 RELQLATDNFSESNIIGQGGFGKVYK----GVLSDNT--KVAVKRLQDYYSPGGEAAFQR 317
+ + +N +G G FGKV + G+ ++ KVAVK L+ + A
Sbjct: 39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 98
Query: 318 EVHLIS-VAIHKNLLQLIGYCT 338
E+ ++S + H+N++ L+G CT
Sbjct: 99 ELKIMSHLGQHENIVNLLGACT 120
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 264 RELQLATDNFSESNIIGQGGFGKVYK----GVLSDNT--KVAVKRLQDYYSPGGEAAFQR 317
+ + +N +G G FGKV + G+ ++ KVAVK L+ + A
Sbjct: 39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 98
Query: 318 EVHLIS-VAIHKNLLQLIGYCT 338
E+ ++S + H+N++ L+G CT
Sbjct: 99 ELKIMSHLGQHENIVNLLGACT 120
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Query: 267 QLATDNFSESNIIGQGGFGKVY----KGVLSDN----TKVAVKRLQDYYSPGGEAAFQRE 318
+L D +G+G FG+V G+ D TKVAVK L+ + + E
Sbjct: 24 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 83
Query: 319 VHLIS-VAIHKNLLQLIGYCT 338
+ ++ + HKN++ L+G CT
Sbjct: 84 MEMMKMIGKHKNIINLLGACT 104
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Query: 267 QLATDNFSESNIIGQGGFGKVY----KGVLSDN----TKVAVKRLQDYYSPGGEAAFQRE 318
+L D +G+G FG+V G+ D TKVAVK L+ + + E
Sbjct: 9 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 68
Query: 319 VHLIS-VAIHKNLLQLIGYCT 338
+ ++ + HKN++ L+G CT
Sbjct: 69 MEMMKMIGKHKNIINLLGACT 89
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 30/56 (53%)
Query: 279 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLI 334
+G G FGKVYK + + +A ++ D S + E+ +++ H N+++L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLL 100
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Query: 269 ATDNFSESNIIGQGGFGKVYKGVLSDNTK-VAVKR-LQDYYSPGGEAAFQREVHLISVAI 326
+ + + ++G+G +G V K D + VA+K+ L+ + RE+ L+
Sbjct: 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLR 82
Query: 327 HKNLLQLIGYCTTSSERILVYPFMQN 352
H+NL+ L+ C LV+ F+ +
Sbjct: 83 HENLVNLLEVCKKKKRWYLVFEFVDH 108
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 6/106 (5%)
Query: 261 FSCRELQLATDNFSESNIIGQGGFGKVYKGVLSD------NTKVAVKRLQDYYSPGGEAA 314
F E +++ + + +GQG FG VY+G D T+VAVK + + S
Sbjct: 7 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 66
Query: 315 FQREVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLR 360
F E ++ ++++L+G + ++V M + + LR
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLR 112
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 6/106 (5%)
Query: 261 FSCRELQLATDNFSESNIIGQGGFGKVYKGVLSD------NTKVAVKRLQDYYSPGGEAA 314
F E +++ + + +GQG FG VY+G D T+VAVK + + S
Sbjct: 4 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 63
Query: 315 FQREVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLR 360
F E ++ ++++L+G + ++V M + + LR
Sbjct: 64 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLR 109
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 30/56 (53%)
Query: 279 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLI 334
+G G FGKVYK + + +A ++ D S + E+ +++ H N+++L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLL 100
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 30/56 (53%)
Query: 279 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLI 334
+G G FGKVYK + + +A ++ D S + E+ +++ H N+++L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLL 100
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Query: 267 QLATDNFSESNIIGQGGFGKVY----KGVLSDN----TKVAVKRLQDYYSPGGEAAFQRE 318
+L D +G+G FG+V G+ D TKVAVK L+ + + E
Sbjct: 17 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 76
Query: 319 VHLIS-VAIHKNLLQLIGYCT 338
+ ++ + HKN++ L+G CT
Sbjct: 77 MEMMKMIGKHKNIINLLGACT 97
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Query: 267 QLATDNFSESNIIGQGGFGKVY----KGVLSDN----TKVAVKRLQDYYSPGGEAAFQRE 318
+L D +G+G FG+V G+ D TKVAVK L+ + + E
Sbjct: 24 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 83
Query: 319 VHLIS-VAIHKNLLQLIGYCT 338
+ ++ + HKN++ L+G CT
Sbjct: 84 MEMMKMIGKHKNIINLLGACT 104
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 11/96 (11%)
Query: 262 SCRELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAF--QREV 319
+ E L DN +IG+G +G VYKG L D VAVK +S F ++ +
Sbjct: 4 AASEPSLDLDNLKLLELIGRGRYGAVYKGSL-DERPVAVK----VFSFANRQNFINEKNI 58
Query: 320 HLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSV 355
+ + + H N+ + I ER+ M+ L V
Sbjct: 59 YRVPLMEHDNIARFI----VGDERVTADGRMEYLLV 90
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Query: 267 QLATDNFSESNIIGQGGFGKVY----KGVLSDN----TKVAVKRLQDYYSPGGEAAFQRE 318
+L D +G+G FG+V G+ D TKVAVK L+ + + E
Sbjct: 13 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 72
Query: 319 VHLIS-VAIHKNLLQLIGYCT 338
+ ++ + HKN++ L+G CT
Sbjct: 73 MEMMKMIGKHKNIINLLGACT 93
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Query: 267 QLATDNFSESNIIGQGGFGKVY----KGVLSDN----TKVAVKRLQDYYSPGGEAAFQRE 318
+L D +G+G FG+V G+ D TKVAVK L+ + + E
Sbjct: 24 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 83
Query: 319 VHLIS-VAIHKNLLQLIGYCT 338
+ ++ + HKN++ L+G CT
Sbjct: 84 MEMMKMIGKHKNIINLLGACT 104
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Query: 267 QLATDNFSESNIIGQGGFGKVY----KGVLSDN----TKVAVKRLQDYYSPGGEAAFQRE 318
+L D +G+G FG+V G+ D TKVAVK L+ + + E
Sbjct: 16 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 75
Query: 319 VHLIS-VAIHKNLLQLIGYCT 338
+ ++ + HKN++ L+G CT
Sbjct: 76 MEMMKMIGKHKNIINLLGACT 96
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 6/106 (5%)
Query: 261 FSCRELQLATDNFSESNIIGQGGFGKVYKGVLSD------NTKVAVKRLQDYYSPGGEAA 314
F E +++ + + +GQG FG VY+G D T+VAVK + + S
Sbjct: 7 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 66
Query: 315 FQREVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLR 360
F E ++ ++++L+G + ++V M + + LR
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLR 112
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 6/106 (5%)
Query: 261 FSCRELQLATDNFSESNIIGQGGFGKVYKGVLSD------NTKVAVKRLQDYYSPGGEAA 314
F E +++ + + +GQG FG VY+G D T+VAVK + + S
Sbjct: 7 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 66
Query: 315 FQREVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLR 360
F E ++ ++++L+G + ++V M + + LR
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLR 112
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 279 IGQGGFGKVYKGVLSDNTK-VAVKRLQ-DYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 336
IG+G +G V+K + + VA+KR++ D G ++ RE+ L+ HKN+++L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 337 CTTSSERILVYPF 349
+ + LV+ F
Sbjct: 70 LHSDKKLTLVFEF 82
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 4/95 (4%)
Query: 267 QLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQREVHLIS 323
Q ++F +G+G FG VY + + A+K L G E +REV + S
Sbjct: 8 QWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQS 67
Query: 324 VAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYR 358
H N+L+L GY ++ L+ + L YR
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAP-LGTVYR 101
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 32.3 bits (72), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 4/95 (4%)
Query: 267 QLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQREVHLIS 323
Q ++F +G+G FG VY + + A+K L G E +REV + S
Sbjct: 8 QWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQS 67
Query: 324 VAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYR 358
H N+L+L GY ++ L+ + L YR
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAP-LGTVYR 101
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 32.3 bits (72), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 262 SCRELQLATDNFSESNIIGQGGFGKVYKGVL----SDNTKVAVKRLQDYYSPGGEAAFQR 317
S R+ ++ + IG+G FG V++G+ + VA+K ++ S F +
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 318 EVHLISVAIHKNLLQLIGYCTTSSERILV 346
E + H ++++LIG T + I++
Sbjct: 61 EALTMRQFDHPHIVKLIGVITENPVWIIM 89
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 32.3 bits (72), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 279 IGQGGFGKVYKGVLSDNTK-VAVKRLQ-DYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 336
IG+G +G V+K + + VA+KR++ D G ++ RE+ L+ HKN+++L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 337 CTTSSERILVYPF 349
+ + LV+ F
Sbjct: 70 LHSDKKLTLVFEF 82
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 32.3 bits (72), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Query: 267 QLATDNFSESNIIGQGGFGKVY----KGVLSDN----TKVAVKRLQDYYSPGGEAAFQRE 318
+L D +G+G FG+V G+ D TKVAVK L+ + + E
Sbjct: 65 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 124
Query: 319 VHLIS-VAIHKNLLQLIGYCT 338
+ ++ + HKN++ L+G CT
Sbjct: 125 MEMMKMIGKHKNIINLLGACT 145
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 32.3 bits (72), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 54/122 (44%), Gaps = 9/122 (7%)
Query: 232 QKLRKLKHDVFFDVAGEDDCKVSLTQLRRFSCRELQLATDNFSESNIIGQGGFGKV---- 287
+ + +++ V ++ G + + TQL + + + S +G G FGKV
Sbjct: 2 KPMYEVQWKVVEEINGNNXVXIDPTQLPY--DHKWEFPRNRLSFGKTLGAGAFGKVVEAT 59
Query: 288 -YKGVLSDNT-KVAVKRLQDYYSPGGEAAFQREVHLIS-VAIHKNLLQLIGYCTTSSERI 344
Y + SD VAVK L+ A E+ ++S + H N++ L+G CT +
Sbjct: 60 AYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTL 119
Query: 345 LV 346
++
Sbjct: 120 VI 121
>pdb|2Z64|A Chain A, Crystal Structure Of Mouse Tlr4 And Mouse Md-2 Complex
Length = 599
Score = 32.3 bits (72), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 10/84 (11%)
Query: 76 GNVISLTLGSNGFSGKISPSITKLKFLASLELQDNDLSGTLPDFLGSMTHLQSLNLANNK 135
GN I + FSG +T L+ L ++E + L + P +G + L+ LN+A+N
Sbjct: 84 GNPIQ-SFSPGSFSG-----LTSLENLVAVETKLASLE-SFP--IGQLITLKKLNVAHNF 134
Query: 136 F-SGSIPATWSQLSNLKHLDLSSN 158
S +PA +S L+NL H+DLS N
Sbjct: 135 IHSCKLPAYFSNLTNLVHVDLSYN 158
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 32.3 bits (72), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 262 SCRELQLATDNFSESNIIGQGGFGKVYKGVL----SDNTKVAVKRLQDYYSPGGEAAFQR 317
S R+ ++ + IG+G FG V++G+ + VA+K ++ S F +
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 318 EVHLISVAIHKNLLQLIGYCTTSSERILV 346
E + H ++++LIG T + I++
Sbjct: 61 EALTMRQFDHPHIVKLIGVITENPVWIIM 89
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 32.3 bits (72), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 262 SCRELQLATDNFSESNIIGQGGFGKVYKGVL----SDNTKVAVKRLQDYYSPGGEAAFQR 317
S R+ ++ + IG+G FG V++G+ + VA+K ++ S F +
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 318 EVHLISVAIHKNLLQLIGYCTTSSERILV 346
E + H ++++LIG T + I++
Sbjct: 61 EALTMRQFDHPHIVKLIGVITENPVWIIM 89
>pdb|3VQ1|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
pdb|3VQ1|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
pdb|3VQ2|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
pdb|3VQ2|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
Length = 606
Score = 32.3 bits (72), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 10/84 (11%)
Query: 76 GNVISLTLGSNGFSGKISPSITKLKFLASLELQDNDLSGTLPDFLGSMTHLQSLNLANNK 135
GN I + FSG +T L+ L ++E + L + P +G + L+ LN+A+N
Sbjct: 89 GNPIQ-SFSPGSFSG-----LTSLENLVAVETKLASLE-SFP--IGQLITLKKLNVAHNF 139
Query: 136 F-SGSIPATWSQLSNLKHLDLSSN 158
S +PA +S L+NL H+DLS N
Sbjct: 140 IHSCKLPAYFSNLTNLVHVDLSYN 163
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 32.3 bits (72), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 268 LATDNFSESNIIGQ-GGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAI 326
L ++F E IIG+ G FGKVYK + + +A ++ D S + E+ +++
Sbjct: 8 LNPEDFWE--IIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCD 65
Query: 327 HKNLLQLI 334
H N+++L+
Sbjct: 66 HPNIVKLL 73
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 32.3 bits (72), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 1/98 (1%)
Query: 76 GNVISLTLGSNGFSGKISPSITKLKFLASLELQDNDLSGTLPDFLGSMTHLQSLNLANNK 135
+ L L SN S S + +L L L L DN L + +L++L + +NK
Sbjct: 37 ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNK 96
Query: 136 FSGSIPATWSQLSNLKHLDLSSNNLTGRIPMQLFSVAT 173
+ QL NL L L N L +P ++F T
Sbjct: 97 LQALPIGVFDQLVNLAELRLDRNQLKS-LPPRVFDSLT 133
Score = 31.2 bits (69), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 43/97 (44%), Gaps = 7/97 (7%)
Query: 77 NVISLTLGSNGFSG---KISPSITKLKFLASLELQDNDLSGTLPDFLGSMTHLQSLNLAN 133
N+ L L N ++ S+TKL +L+ L N+L +T L+ L L N
Sbjct: 110 NLAELRLDRNQLKSLPPRVFDSLTKLTYLS---LGYNELQSLPKGVFDKLTSLKELRLYN 166
Query: 134 NKFSGSIPATWSQLSNLKHLDLSSNNLTGRIPMQLFS 170
N+ + +L+ LK L L +N L R+P F
Sbjct: 167 NQLKRVPEGAFDKLTELKTLKLDNNQLK-RVPEGAFD 202
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 32.0 bits (71), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Query: 271 DNFSESNIIGQGGFGKVYKG-VLSDNTKVAVKRL--QDYYSPGGEAAFQREVHLISVAIH 327
++F N++G+G F VY+ + +VA+K + + Y G Q EV + H
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH 70
Query: 328 KNLLQLIGYCTTSSERILVYPFMQN 352
++L+L Y S+ LV N
Sbjct: 71 PSILELYNYFEDSNYVYLVLEMCHN 95
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 32.0 bits (71), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 8/80 (10%)
Query: 279 IGQGGFGKV--YKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 336
+G+GGF V +G L D A+KR+ + E A QRE + + H N+L+L+ Y
Sbjct: 37 LGEGGFSYVDLVEG-LHDGHFYALKRILCHEQQDREEA-QREADMHRLFNHPNILRLVAY 94
Query: 337 CT----TSSERILVYPFMQN 352
C E L+ PF +
Sbjct: 95 CLRERGAKHEAWLLLPFFKR 114
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 32.0 bits (71), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 254 SLTQLRRFSCRELQLATDN-FSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQD 305
S+ LR F+ + ++ + F++ + IG+G FG+VYKG+ + +V ++ D
Sbjct: 1 SMAHLRGFANQHSRVDPEELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIID 53
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 32.0 bits (71), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 46/102 (45%), Gaps = 6/102 (5%)
Query: 265 ELQLATDNFSESNIIGQGGFGKVYKGVLSD------NTKVAVKRLQDYYSPGGEAAFQRE 318
E +++ + + +GQG FG VY+G D T+VAVK + + S F E
Sbjct: 11 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE 70
Query: 319 VHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLR 360
++ ++++L+G + ++V M + + LR
Sbjct: 71 ASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLR 112
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 32.0 bits (71), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Query: 276 SNIIGQGGFGKVYKGVLSDNT----KVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 331
+IG+G FG VY G D + A+K L AF RE L+ H N+L
Sbjct: 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVL 85
Query: 332 QLIG 335
LIG
Sbjct: 86 ALIG 89
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 32.0 bits (71), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 13/127 (10%)
Query: 231 YQKLRKLKHDVFFDVA----GEDDCKVSLTQLRRFSCRELQLATDNFSESNIIGQGGFGK 286
Y+ L+K ++V + V G + + TQL + + + S +G G FGK
Sbjct: 4 YKYLQKPMYEVQWKVVEEINGNNYVYIDPTQLPY--DHKWEFPRNRLSFGKTLGAGAFGK 61
Query: 287 V-----YKGVLSDNT-KVAVKRLQDYYSPGGEAAFQREVHLIS-VAIHKNLLQLIGYCTT 339
V Y + SD VAVK L+ A E+ ++S + H N++ L+G CT
Sbjct: 62 VVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTI 121
Query: 340 SSERILV 346
+++
Sbjct: 122 GGPTLVI 128
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 32.0 bits (71), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 279 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEA--AFQREVHLISVAIHKNLLQLIGY 336
+G G FG+V+ + +TKVAVK ++ PG + AF E +++ H L++L
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMK----PGSMSVEAFLAEANVMKTLQHDKLVKLHAV 78
Query: 337 CTTS 340
T
Sbjct: 79 VTKE 82
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 32.0 bits (71), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 261 FSCRELQLATDNFSESNIIGQGGFGKVYK----GVLSDNT--KVAVKRLQDYYSPGGEAA 314
+ + + A + +G+G FGKV + G+ T VAVK L++ + A
Sbjct: 17 YDASKWEFARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKA 76
Query: 315 FQREVHLIS-VAIHKNLLQLIGYCTTSSERILV 346
E+ +++ + H N++ L+G CT ++V
Sbjct: 77 LMTELKILTHIGHHLNVVNLLGACTKQGGPLMV 109
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 32.0 bits (71), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 262 SCRELQLATDNFSESNIIGQGGFGKVYKGVL----SDNTKVAVKRLQDYYSPGGEAAFQR 317
S R+ ++ + IG+G FG V++G+ + VA+K ++ S F +
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 60
Query: 318 EVHLISVAIHKNLLQLIGYCTTSSERILV 346
E + H ++++LIG T + I++
Sbjct: 61 EALTMRQFDHPHIVKLIGVITENPVWIIM 89
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 32.0 bits (71), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Query: 272 NFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 331
+F E +IG GGFG+V+K + K V + Y + E REV ++ H N++
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAE----REVKALAKLDHVNIV 67
Query: 332 QLIG 335
G
Sbjct: 68 HYNG 71
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 32.0 bits (71), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 13/127 (10%)
Query: 231 YQKLRKLKHDVFFDVA----GEDDCKVSLTQLRRFSCRELQLATDNFSESNIIGQGGFGK 286
Y+ L+K ++V + V G + + TQL + + + S +G G FGK
Sbjct: 4 YKYLQKPMYEVQWKVVEEINGNNYVYIDPTQLPY--DHKWEFPRNRLSFGKTLGAGAFGK 61
Query: 287 V-----YKGVLSDNT-KVAVKRLQDYYSPGGEAAFQREVHLIS-VAIHKNLLQLIGYCTT 339
V Y + SD VAVK L+ A E+ ++S + H N++ L+G CT
Sbjct: 62 VVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTI 121
Query: 340 SSERILV 346
+++
Sbjct: 122 GGPTLVI 128
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 32.0 bits (71), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
Query: 261 FSCRELQLATDNFSESNIIGQGGFGKVYK----GVLSDNTK--VAVKRLQDYYSPGGEAA 314
+ + + D + +G+G FG+V + G+ T VAVK L++ + A
Sbjct: 17 YDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRA 76
Query: 315 FQREVH-LISVAIHKNLLQLIGYCTTSSERILV 346
E+ LI + H N++ L+G CT ++V
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 109
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 32.0 bits (71), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Query: 279 IGQGGFGKV---YKGVLSDNT--KVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQL 333
+G+G FGKV DNT +VAVK L+ A ++E+ ++ H+N+++
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 334 IGYCTTS 340
G CT
Sbjct: 77 KGICTED 83
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 32.0 bits (71), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 6/62 (9%)
Query: 279 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEA--AFQREVHLISVAIHKNLLQLIGY 336
+G G FG+V+ + +TKVAVK ++ PG + AF E +++ H L++L
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMK----PGSMSVEAFLAEANVMKTLQHDKLVKLHAV 245
Query: 337 CT 338
T
Sbjct: 246 VT 247
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 31.6 bits (70), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 262 SCRELQLATDNFSESNIIGQGGFGKVYKGVL----SDNTKVAVKRLQDYYSPGGEAAFQR 317
S R+ ++ + IG+G FG V++G+ + VA+K ++ S F +
Sbjct: 6 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 65
Query: 318 EVHLISVAIHKNLLQLIGYCTTSSERILV 346
E + H ++++LIG T + I++
Sbjct: 66 EALTMRQFDHPHIVKLIGVITENPVWIIM 94
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 31.6 bits (70), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 279 IGQGGFGKV---YKGVLSDNT--KVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQL 333
+G+G FGKV DNT +VAVK L+ A ++E+ ++ H+N+++
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 334 IGYCT 338
G CT
Sbjct: 89 KGICT 93
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 31.6 bits (70), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 262 SCRELQLATDNFSESNIIGQGGFGKVYKGVL----SDNTKVAVKRLQDYYSPGGEAAFQR 317
S R+ ++ + IG+G FG V++G+ + VA+K ++ S F +
Sbjct: 29 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 88
Query: 318 EVHLISVAIHKNLLQLIGYCTTSSERILV 346
E + H ++++LIG T + I++
Sbjct: 89 EALTMRQFDHPHIVKLIGVITENPVWIIM 117
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 31.6 bits (70), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 46/102 (45%), Gaps = 6/102 (5%)
Query: 265 ELQLATDNFSESNIIGQGGFGKVYKGVLSD------NTKVAVKRLQDYYSPGGEAAFQRE 318
E +++ + + +GQG FG VY+G D T+VAVK + + S F E
Sbjct: 11 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE 70
Query: 319 VHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLR 360
++ ++++L+G + ++V M + + LR
Sbjct: 71 ASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLR 112
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 31.6 bits (70), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 7/93 (7%)
Query: 261 FSCRELQLATDNFSESNIIGQGGFGKVYK----GVLSDNTK--VAVKRLQDYYSPGGEAA 314
+ + + D +G+G FG+V + G+ T VAVK L++ + A
Sbjct: 19 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRA 78
Query: 315 FQREVH-LISVAIHKNLLQLIGYCTTSSERILV 346
E+ LI + H N++ L+G CT ++V
Sbjct: 79 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 111
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 31.6 bits (70), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 6/62 (9%)
Query: 279 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEA--AFQREVHLISVAIHKNLLQLIGY 336
+G G FG+V+ + +TKVAVK ++ PG + AF E +++ H L++L
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMK----PGSMSVEAFLAEANVMKTLQHDKLVKLHAV 251
Query: 337 CT 338
T
Sbjct: 252 VT 253
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 31.6 bits (70), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 46/102 (45%), Gaps = 6/102 (5%)
Query: 265 ELQLATDNFSESNIIGQGGFGKVYKGVLSD------NTKVAVKRLQDYYSPGGEAAFQRE 318
E +++ + + +GQG FG VY+G D T+VAVK + + S F E
Sbjct: 12 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE 71
Query: 319 VHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLR 360
++ ++++L+G + ++V M + + LR
Sbjct: 72 ASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLR 113
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 31.6 bits (70), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 262 SCRELQLATDNFSESNIIGQGGFGKVYKGVL----SDNTKVAVKRLQDYYSPGGEAAFQR 317
S R+ ++ + IG+G FG V++G+ + VA+K ++ S F +
Sbjct: 3 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 62
Query: 318 EVHLISVAIHKNLLQLIGYCTTSSERILV 346
E + H ++++LIG T + I++
Sbjct: 63 EALTMRQFDHPHIVKLIGVITENPVWIIM 91
>pdb|3J0A|A Chain A, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
pdb|3J0A|B Chain B, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
Length = 844
Score = 31.6 bits (70), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 40/93 (43%), Gaps = 10/93 (10%)
Query: 99 LKFLASLELQDNDLSGTLPDFLGSMTHLQSLNLANNKFS----GSIPATWSQLSNLKHLD 154
L L L L N L+ P +T L+ L+L +N+ + +PA NL+ LD
Sbjct: 479 LSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLPA------NLEILD 532
Query: 155 LSSNNLTGRIPMQLFSVATFNFTGTHLICGSSL 187
+S N L P S++ + T IC L
Sbjct: 533 ISRNQLLAPNPDVFVSLSVLDITHNKFICECEL 565
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 25/44 (56%)
Query: 118 DFLGSMTHLQSLNLANNKFSGSIPATWSQLSNLKHLDLSSNNLT 161
D ++HLQ L L +N + P +S L+ L+ L L+SN LT
Sbjct: 474 DVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLT 517
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 31.6 bits (70), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 262 SCRELQLATDNFSESNIIGQGGFGKVYKGVL----SDNTKVAVKRLQDYYSPGGEAAFQR 317
S R+ ++ + IG+G FG V++G+ + VA+K ++ S F +
Sbjct: 4 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 63
Query: 318 EVHLISVAIHKNLLQLIGYCTTSSERILV 346
E + H ++++LIG T + I++
Sbjct: 64 EALTMRQFDHPHIVKLIGVITENPVWIIM 92
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 31.6 bits (70), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 266 LQLATDNFSESNIIGQGGFGKVYKGVLSDNTKV 298
+ L ++FS IIG+GGFG+VY +D K+
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKM 216
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 31.6 bits (70), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 266 LQLATDNFSESNIIGQGGFGKVYKGVLSDNTKV 298
+ L ++FS IIG+GGFG+VY +D K+
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKM 216
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 31.6 bits (70), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 262 SCRELQLATDNFSESNIIGQGGFGKVYKGVL----SDNTKVAVKRLQDYYSPGGEAAFQR 317
S R+ ++ + IG+G FG V++G+ + VA+K ++ S F +
Sbjct: 381 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 440
Query: 318 EVHLISVAIHKNLLQLIGYCTTSSERILV 346
E + H ++++LIG T + I++
Sbjct: 441 EALTMRQFDHPHIVKLIGVITENPVWIIM 469
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 31.6 bits (70), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 266 LQLATDNFSESNIIGQGGFGKVYKGVLSDNTKV 298
+ L ++FS IIG+GGFG+VY +D K+
Sbjct: 183 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKM 215
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 31.6 bits (70), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 262 SCRELQLATDNFSESNIIGQGGFGKVYKGVL----SDNTKVAVKRLQDYYSPGGEAAFQR 317
S R+ ++ + IG+G FG V++G+ + VA+K ++ S F +
Sbjct: 381 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 440
Query: 318 EVHLISVAIHKNLLQLIGYCTTSSERILV 346
E + H ++++LIG T + I++
Sbjct: 441 EALTMRQFDHPHIVKLIGVITENPVWIIM 469
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 31.6 bits (70), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 266 LQLATDNFSESNIIGQGGFGKVYKGVLSDNTKV 298
+ L ++FS IIG+GGFG+VY +D K+
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKM 216
>pdb|3O6N|A Chain A, Crystal Structure Of Apl1 Leucine-Rich Repeat Domain
Length = 390
Score = 31.6 bits (70), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 49/119 (41%), Gaps = 10/119 (8%)
Query: 65 CFSWSHVTCRNGNVISLTLGSNGFSGKISPSITKLKFLASLELQDNDLSGTLPDFLGSMT 124
F+++H + L +G N + L L L+ NDLS +
Sbjct: 88 AFAYAHT------IQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTP 141
Query: 125 HLQSLNLANNKFSGSIPATWSQLSNLKHLDLSSNNLT----GRIPMQLFSVATFNFTGT 179
L +L+++NN T+ ++L++L LSSN LT IP + ++N T
Sbjct: 142 KLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLST 200
>pdb|3OJA|B Chain B, Crystal Structure Of Lrim1APL1C COMPLEX
Length = 597
Score = 31.6 bits (70), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 49/119 (41%), Gaps = 10/119 (8%)
Query: 65 CFSWSHVTCRNGNVISLTLGSNGFSGKISPSITKLKFLASLELQDNDLSGTLPDFLGSMT 124
F+++H + L +G N + L L L+ NDLS +
Sbjct: 94 AFAYAHT------IQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTP 147
Query: 125 HLQSLNLANNKFSGSIPATWSQLSNLKHLDLSSNNLT----GRIPMQLFSVATFNFTGT 179
L +L+++NN T+ ++L++L LSSN LT IP + ++N T
Sbjct: 148 KLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLST 206
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 31.2 bits (69), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 6/88 (6%)
Query: 279 IGQGGFGKVYKGVLSD------NTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQ 332
+GQG FG VY+G D T+VAVK + + S F E ++ ++++
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 333 LIGYCTTSSERILVYPFMQNLSVAYRLR 360
L+G + ++V M + + LR
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLR 111
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 31.2 bits (69), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 54/122 (44%), Gaps = 9/122 (7%)
Query: 232 QKLRKLKHDVFFDVAGEDDCKVSLTQLRRFSCRELQLATDNFSESNIIGQGGFGKV---- 287
+ + +++ V ++ G + + TQL + + + S +G G FGKV
Sbjct: 4 KPMYEVQWKVVEEINGNNYVYIDPTQLPY--DHKWEFPRNRLSFGKTLGAGAFGKVVEAT 61
Query: 288 -YKGVLSDNT-KVAVKRLQDYYSPGGEAAFQREVHLIS-VAIHKNLLQLIGYCTTSSERI 344
Y + SD VAVK L+ A E+ ++S + H N++ L+G CT +
Sbjct: 62 AYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTL 121
Query: 345 LV 346
++
Sbjct: 122 VI 123
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Query: 267 QLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQREVHLIS 323
+ D+F +G+G FG VY N + A+K L G E +RE+ + S
Sbjct: 10 KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 69
Query: 324 VAIHKNLLQLIGY 336
H N+L++ Y
Sbjct: 70 HLRHPNILRMYNY 82
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 7/73 (9%)
Query: 279 IGQGGFGKV----YKGVLSDNT--KVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQ 332
+G+G FGKV Y +D T VAVK L+ P + +++E+ ++ H+++++
Sbjct: 22 LGEGHFGKVSLYCYDPT-NDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIK 80
Query: 333 LIGYCTTSSERIL 345
G C E+ L
Sbjct: 81 YKGCCEDQGEKSL 93
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Query: 267 QLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQREVHLIS 323
+ D+F +G+G FG VY N + A+K L G E +RE+ + S
Sbjct: 11 KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 70
Query: 324 VAIHKNLLQLIGY 336
H N+L++ Y
Sbjct: 71 HLRHPNILRMYNY 83
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 7/93 (7%)
Query: 261 FSCRELQLATDNFSESNIIGQGGFGKVYK----GVLSDNT--KVAVKRLQDYYSPGGEAA 314
+ + + D +G+G FG+V + G+ T VAVK L++ + A
Sbjct: 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 71
Query: 315 FQREVH-LISVAIHKNLLQLIGYCTTSSERILV 346
E+ LI + H N++ L+G CT ++V
Sbjct: 72 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 104
>pdb|1XKU|A Chain A, Crystal Structure Of The Dimeric Protein Core Of Decorin,
The Archetypal Small Leucine-Rich Repeat Proteoglycan
Length = 330
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 103 ASLELQDNDLSGTLPDFLGSMTHLQSLNLANNKFSGSIPATWSQLSNLKHLDLSSNNL 160
A L+LQ+N ++ ++ +L +L L NNK S P ++ L L+ L LS N L
Sbjct: 55 ALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQL 112
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 7/73 (9%)
Query: 279 IGQGGFGKV----YKGVLSDNT--KVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQ 332
+G+G FGKV Y +D T VAVK L+ P + +++E+ ++ H+++++
Sbjct: 22 LGEGHFGKVSLYCYDPT-NDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIK 80
Query: 333 LIGYCTTSSERIL 345
G C E+ L
Sbjct: 81 YKGCCEDQGEKSL 93
>pdb|1XCD|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 1
pdb|1XEC|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
pdb|1XEC|B Chain B, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
Length = 329
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 103 ASLELQDNDLSGTLPDFLGSMTHLQSLNLANNKFSGSIPATWSQLSNLKHLDLSSNNL 160
A L+LQ+N ++ ++ +L +L L NNK S P ++ L L+ L LS N L
Sbjct: 55 ALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQL 112
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 7/93 (7%)
Query: 261 FSCRELQLATDNFSESNIIGQGGFGKVYK----GVLSDNT--KVAVKRLQDYYSPGGEAA 314
+ + + D +G+G FG+V + G+ T VAVK L++ + A
Sbjct: 10 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 69
Query: 315 FQREVH-LISVAIHKNLLQLIGYCTTSSERILV 346
E+ LI + H N++ L+G CT ++V
Sbjct: 70 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 102
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 7/93 (7%)
Query: 261 FSCRELQLATDNFSESNIIGQGGFGKVYK----GVLSDNT--KVAVKRLQDYYSPGGEAA 314
+ + + D +G+G FG+V + G+ T VAVK L++ + A
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 76
Query: 315 FQREVH-LISVAIHKNLLQLIGYCTTSSERILV 346
E+ LI + H N++ L+G CT ++V
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 109
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 7/93 (7%)
Query: 261 FSCRELQLATDNFSESNIIGQGGFGKVYK----GVLSDNT--KVAVKRLQDYYSPGGEAA 314
+ + + D +G+G FG+V + G+ T VAVK L++ + A
Sbjct: 19 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 78
Query: 315 FQREVH-LISVAIHKNLLQLIGYCTTSSERILV 346
E+ LI + H N++ L+G CT ++V
Sbjct: 79 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 111
>pdb|3CIG|A Chain A, Crystal Structure Of Mouse Tlr3 Ectodomain
pdb|3CIY|A Chain A, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
pdb|3CIY|B Chain B, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
Length = 697
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Query: 122 SMTHLQSLNLANNKFSGSIPATWSQL--SNLKHLDLSSNNL 160
S T +Q+L+LANN+ + +T+S L +NL LDLS NNL
Sbjct: 220 SNTSIQNLSLANNQLLATSESTFSGLKWTNLTQLDLSYNNL 260
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Query: 267 QLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQREVHLIS 323
+ D+F +G+G FG VY N + A+K L G E +RE+ + S
Sbjct: 10 KFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 69
Query: 324 VAIHKNLLQLIGY 336
H N+L++ Y
Sbjct: 70 HLRHPNILRMYNY 82
>pdb|3B2D|A Chain A, Crystal Structure Of Human Rp105MD-1 Complex
pdb|3B2D|B Chain B, Crystal Structure Of Human Rp105MD-1 Complex
Length = 603
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 11/110 (10%)
Query: 67 SWSHVTCRNGNVISLTLGSNGFSGKISPSITKLKFLASLELQDNDLSGT--LPDFLGSMT 124
S +H+ R GNV L LG + KL L +L+L ND+ + L +++
Sbjct: 323 SLTHLYIR-GNVKKLHLGVG--------CLEKLGNLQTLDLSHNDIEASDCCSLQLKNLS 373
Query: 125 HLQSLNLANNKFSGSIPATWSQLSNLKHLDLSSNNLTGRIPMQLFSVATF 174
HLQ+LNL++N+ G + + L+ LDL+ L P F F
Sbjct: 374 HLQTLNLSHNEPLGLQSQAFKECPQLELLDLAFTRLHINAPQSPFQNLHF 423
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Query: 88 FSGKISPSITKLKFLASLE-LQDNDLSGTLPDFLGSMTHLQSLNLANNKFSGSIPATWSQ 146
F+G + S T+ +L + E + D D+S + L M+ ++SLNL ++FS T+
Sbjct: 216 FNG-LQNSTTQSLWLGTFEDIDDEDISSAMLKGLCEMS-VESLNLQEHRFSDISSTTFQC 273
Query: 147 LSNLKHLDLSSNNLTG 162
+ L+ LDL++ +L G
Sbjct: 274 FTQLQELDLTATHLKG 289
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 279 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYCT 338
IG+G FG V G N KVAVK +++ + AF E +++ H NL+QL+G
Sbjct: 20 IGKGEFGDVMLGDYRGN-KVAVKCIKNDATA---QAFLAEASVMTQLRHSNLVQLLGVIV 75
Query: 339 TSSERI-LVYPFMQNLSVAYRLR 360
+ +V +M S+ LR
Sbjct: 76 EEKGGLYIVTEYMAKGSLVDYLR 98
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Query: 273 FSESNIIGQGGFGKVYKGVLSD-NTKVAVKRLQDYYSPGGEAAFQR----EVHLISVAIH 327
+ + + +G+G F VYK + N VA+K+++ + + R E+ L+ H
Sbjct: 12 YEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSH 71
Query: 328 KNLLQLIGYCTTSSERILVYPFMQ 351
N++ L+ S LV+ FM+
Sbjct: 72 PNIIGLLDAFGHKSNISLVFDFME 95
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 279 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIG 335
IG+G FG V G N KVAVK +++ AF E +++ H NL+QL+G
Sbjct: 201 IGKGEFGDVMLGDYRGN-KVAVKCIKN---DATAQAFLAEASVMTQLRHSNLVQLLG 253
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 5/75 (6%)
Query: 271 DNFSESNIIGQGGFGKVYKG-VLSDNTKVAVKR-LQDYYSPGGEAAFQREVHLISVAIHK 328
D F + GQG FG V G S VA+K+ +QD E ++ ++V H
Sbjct: 23 DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQD---LAVLHHP 79
Query: 329 NLLQLIGYCTTSSER 343
N++QL Y T ER
Sbjct: 80 NIVQLQSYFYTLGER 94
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 279 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYCT 338
IG+G FG V G N KVAVK +++ + AF E +++ H NL+QL+G
Sbjct: 29 IGKGEFGDVMLGDYRGN-KVAVKCIKNDATA---QAFLAEASVMTQLRHSNLVQLLGVIV 84
Query: 339 TSSERI-LVYPFMQNLSVAYRLR 360
+ +V +M S+ LR
Sbjct: 85 EEKGGLYIVTEYMAKGSLVDYLR 107
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 279 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYCT 338
IG+G FG V G N KVAVK +++ + AF E +++ H NL+QL+G
Sbjct: 14 IGKGEFGDVMLGDYRGN-KVAVKCIKNDATA---QAFLAEASVMTQLRHSNLVQLLGVIV 69
Query: 339 TSSERI-LVYPFMQNLSVAYRLR 360
+ +V +M S+ LR
Sbjct: 70 EEKGGLYIVTEYMAKGSLVDYLR 92
>pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr)
Rbc36 In Complex With H-Trisaccharide
Length = 229
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
Query: 77 NVISLTLGSNGFSGKISPSITKLKFLASLELQDNDLSGTLPDFLGSMTHLQSLNLANNKF 136
N+ L LGSN L L L+L N L+ + HL+ L + NK
Sbjct: 65 NLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKL 124
Query: 137 SGSIPATWSQLSNLKHLDLSSNNLTGRIPMQLF 169
+ +P +L++L HL L N L IP F
Sbjct: 125 T-ELPRGIERLTHLTHLALDQNQLKS-IPHGAF 155
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 276 SNIIGQGGFGKVYKGV-LSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLI 334
S ++G+G + KV V L + + AVK ++ F+ L +KN+L+LI
Sbjct: 18 SELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELI 77
Query: 335 GYCTTSSERILVYPFMQNLSV 355
+ + LV+ +Q S+
Sbjct: 78 EFFEDDTRFYLVFEKLQGGSI 98
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Query: 265 ELQLATDNFSESNIIGQGGFGKV-----YKGVLSDNT-KVAVKRLQDYYSPGGEAAFQRE 318
+ + + S +G G FGKV Y + SD VAVK L+ A E
Sbjct: 17 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSE 76
Query: 319 VHLIS-VAIHKNLLQLIGYCTTSSERILV 346
+ ++S + H N++ L+G CT +++
Sbjct: 77 LKVLSYLGNHMNIVNLLGACTIGGPTLVI 105
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 11/73 (15%)
Query: 277 NIIGQGGFGKVYKGVL-----SDNTKVAVKRLQDYYSPGGEAAFQREV-HLISVAI--HK 328
++G G FG V+KGV S V +K ++D G +FQ H++++ H
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDK---SGRQSFQAVTDHMLAIGSLDHA 93
Query: 329 NLLQLIGYCTTSS 341
++++L+G C SS
Sbjct: 94 HIVRLLGLCPGSS 106
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 11/73 (15%)
Query: 277 NIIGQGGFGKVYKGVL-----SDNTKVAVKRLQDYYSPGGEAAFQREV-HLISVAI--HK 328
++G G FG V+KGV S V +K ++D G +FQ H++++ H
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDK---SGRQSFQAVTDHMLAIGSLDHA 75
Query: 329 NLLQLIGYCTTSS 341
++++L+G C SS
Sbjct: 76 HIVRLLGLCPGSS 88
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 276 SNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIG 335
++G+G FG V K VA+K+++ S AF E+ +S H N+++L G
Sbjct: 13 EEVVGRGAFGVVCKAKWRAK-DVAIKQIE---SESERKAFIVELRQLSRVNHPNIVKLYG 68
Query: 336 YC 337
C
Sbjct: 69 AC 70
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 279 IGQGGFGKVYKGVLSDNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 337
IG+G +G VYK + A+K+++ + G + RE+ ++ H N+++L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 338 TTSSERILVY 347
T +LV+
Sbjct: 70 HTKKRLVLVF 79
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 279 IGQGGFGKVYKGVLSDNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 337
IG+G +G VYK + A+K+++ + G + RE+ ++ H N+++L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 338 TTSSERILVY 347
T +LV+
Sbjct: 70 HTKKRLVLVF 79
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 276 SNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIG 335
++G+G FG V K VA+K+++ S AF E+ +S H N+++L G
Sbjct: 14 EEVVGRGAFGVVCKAKWRAK-DVAIKQIE---SESERKAFIVELRQLSRVNHPNIVKLYG 69
Query: 336 YC 337
C
Sbjct: 70 AC 71
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 279 IGQGGFGKVYKGVLSDNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 337
IG+G +G VYK + A+K+++ + G + RE+ ++ H N+++L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 338 TTSSERILVY 347
T +LV+
Sbjct: 70 HTKKRLVLVF 79
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 279 IGQGGFGKVYKGVLS----DNTKVAVKRLQ-DYYS-PGGEAAFQREVHLISVAIHKNLLQ 332
+G G FG V +G VAVK L+ D S P F REV+ + H+NL++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 333 LIGYCTTSSERIL 345
L G T +++
Sbjct: 76 LYGVVLTPPMKMV 88
>pdb|4ARN|A Chain A, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARN|B Chain B, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARN|C Chain C, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARN|D Chain D, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARR|A Chain A, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor With The Magic Triangle I3c
pdb|4ARR|B Chain B, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor With The Magic Triangle I3c
Length = 279
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%)
Query: 99 LKFLASLELQDNDLSGTLPDFLGSMTHLQSLNLANNKFSGSIPATWSQLSNLKHLDLSSN 158
L+ L S+E N L G M L+ LNLA+N+ + +L++L+ + L +N
Sbjct: 169 LENLESIEFGSNKLRQMPRGIFGKMPKLKQLNLASNQLKSVPDGIFDRLTSLQKIWLHTN 228
Score = 29.3 bits (64), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Query: 96 ITKLKFLASLELQDNDLSGTLPDFL-GSMTHLQSLNLANNKFSGSIPATWSQLSNLKHLD 154
+T ++ L+ LEL+ N +P L + +L+S+ +NK + ++ LK L+
Sbjct: 143 LTDMRNLSHLELRAN--IEEMPSHLFDDLENLESIEFGSNKLRQMPRGIFGKMPKLKQLN 200
Query: 155 LSSNNLTGRIPMQLFSVAT 173
L+SN L +P +F T
Sbjct: 201 LASNQLKS-VPDGIFDRLT 218
>pdb|1ZIW|A Chain A, Human Toll-Like Receptor 3 Extracellular Domain Structure
Length = 680
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 41/84 (48%)
Query: 77 NVISLTLGSNGFSGKISPSITKLKFLASLELQDNDLSGTLPDFLGSMTHLQSLNLANNKF 136
N+ L L N + + T+ L SL++ N +S P+ + L+ LNL +N+
Sbjct: 26 NITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNEL 85
Query: 137 SGSIPATWSQLSNLKHLDLSSNNL 160
S T++ +NL L L SN++
Sbjct: 86 SQLSDKTFAFCTNLTELHLMSNSI 109
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 99 LKFLASLELQDNDLS--------GTLPDFLGSMTHLQSLNLANNKFSGSIPATWSQLSNL 150
L+ L L+LQ N+L+ G FL ++HL LNL +N F + L L
Sbjct: 503 LEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFEL 562
Query: 151 KHLDLSSNNLTGRIPMQLFS 170
K +DL NNL +P +F+
Sbjct: 563 KIIDLGLNNL-NTLPASVFN 581
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 279 IGQGGFGKVYKGVLS----DNTKVAVKRLQ-DYYS-PGGEAAFQREVHLISVAIHKNLLQ 332
+G G FG V +G VAVK L+ D S P F REV+ + H+NL++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 333 LIGYCTTSSERIL 345
L G T +++
Sbjct: 76 LYGVVLTPPMKMV 88
>pdb|2A0Z|A Chain A, The Molecular Structure Of Toll-like Receptor 3 Ligand
Binding Domain
Length = 705
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 41/84 (48%)
Query: 77 NVISLTLGSNGFSGKISPSITKLKFLASLELQDNDLSGTLPDFLGSMTHLQSLNLANNKF 136
N+ L L N + + T+ L SL++ N +S P+ + L+ LNL +N+
Sbjct: 31 NITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNEL 90
Query: 137 SGSIPATWSQLSNLKHLDLSSNNL 160
S T++ +NL L L SN++
Sbjct: 91 SQLSDKTFAFCTNLTELHLMSNSI 114
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 99 LKFLASLELQDNDLS--------GTLPDFLGSMTHLQSLNLANNKFSGSIPATWSQLSNL 150
L+ L L+LQ N+L+ G FL ++HL LNL +N F + L L
Sbjct: 508 LEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFEL 567
Query: 151 KHLDLSSNNLTGRIPMQLFS 170
K +DL NNL +P +F+
Sbjct: 568 KIIDLGLNNL-NTLPASVFN 586
>pdb|3P72|A Chain A, Structure Of Platelet Glycoprotein 1b Alpha With A Bound
Peptide Inhibitor
Length = 269
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Query: 102 LASLELQDNDLSGTLPDFLGSMTHLQSLNLANNKFSGSIPATWSQLSNLKHLDLSSNNLT 161
L L L+ N+L P L L+ L+LANN+ + + L NL L L N+L
Sbjct: 126 LQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLNGLENLDTLLLQENSLY 185
Query: 162 GRIPMQLFSVATFNFTGTH 180
IP F F H
Sbjct: 186 -TIPKGFFGSHLLPFAFLH 203
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 279 IGQGGFGKVYKGVLS----DNTKVAVKRLQ-DYYS-PGGEAAFQREVHLISVAIHKNLLQ 332
+G G FG V +G VAVK L+ D S P F REV+ + H+NL++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 333 LIGYCTTSSERIL 345
L G T +++
Sbjct: 76 LYGVVLTPPMKMV 88
>pdb|2WFH|A Chain A, The Human Slit 2 Dimerization Domain D4
pdb|2WFH|B Chain B, The Human Slit 2 Dimerization Domain D4
Length = 193
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 77 NVISLTLGSNGFSGKISPSITKLKFLASLELQDNDLSGTLPDFLGSMTHLQSLNLANNKF 136
+V L L N F+ + ++ K L ++L +N +S +MT L +L L+ N+
Sbjct: 32 DVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRL 90
Query: 137 SGSIPATWSQLSNLKHLDLSSNNLT 161
P T+ L +L+ L L N+++
Sbjct: 91 RCIPPRTFDGLKSLRLLSLHGNDIS 115
>pdb|1M10|B Chain B, Crystal Structure Of The Complex Of Glycoprotein Ib Alpha
And The Von Willebrand Factor A1 Domain
Length = 290
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Query: 102 LASLELQDNDLSGTLPDFLGSMTHLQSLNLANNKFSGSIPATWSQLSNLKHLDLSSNNLT 161
L L L+ N+L P L L+ L+LANN+ + + L NL L L N+L
Sbjct: 126 LQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLNGLENLDTLLLQENSLY 185
Query: 162 GRIPMQLFSVATFNFTGTH 180
IP F F H
Sbjct: 186 -TIPKGFFGSHLLPFAFLH 203
>pdb|3ULU|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form1)
pdb|3ULV|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form2)
Length = 694
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 41/84 (48%)
Query: 77 NVISLTLGSNGFSGKISPSITKLKFLASLELQDNDLSGTLPDFLGSMTHLQSLNLANNKF 136
N+ L L N + + T+ L SL++ N +S P+ + L+ LNL +N+
Sbjct: 36 NITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNEL 95
Query: 137 SGSIPATWSQLSNLKHLDLSSNNL 160
S T++ +NL L L SN++
Sbjct: 96 SQLSDKTFAFCTNLTELHLMSNSI 119
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 99 LKFLASLELQDNDLS--------GTLPDFLGSMTHLQSLNLANNKFSGSIPATWSQLSNL 150
L+ L L+LQ N+L+ G FL ++HL LNL +N F + L L
Sbjct: 513 LEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFEL 572
Query: 151 KHLDLSSNNLTGRIPMQLFS 170
K +DL NNL +P +F+
Sbjct: 573 KIIDLGLNNL-NTLPASVFN 591
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 279 IGQGGFGKVYKGVLS----DNTKVAVKRLQ-DYYS-PGGEAAFQREVHLISVAIHKNLLQ 332
+G G FG V +G VAVK L+ D S P F REV+ + H+NL++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 333 LIGYCTTSSERIL 345
L G T +++
Sbjct: 80 LYGVVLTPPMKMV 92
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Query: 279 IGQGGFGKVYKGVLS----DNTKVAVKRLQ-DYYS-PGGEAAFQREVHLISVAIHKNLLQ 332
+G G FG V +G VAVK L+ D S P F REV+ + H+NL++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 333 LIGYCTTSSERILV 346
L G T +++
Sbjct: 86 LYGVVLTPPMKMVT 99
>pdb|2Z7X|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 549
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 74 RNGNVISLTLGSNGFSGKISPSITKLKFLASLELQDNDLSGTLPDFLGSMTHLQSLNLAN 133
RNG + GS+G I +T+ + SL+L +N ++ L +LQ+L L +
Sbjct: 6 RNG----ICKGSSGSLNSIPSGLTEA--VKSLDLSNNRITYISNSDLQRCVNLQALVLTS 59
Query: 134 NKFSGSIPATWSQLSNLKHLDLSSNNLTG 162
N + ++S L +L+HLDLS N L+
Sbjct: 60 NGINTIEEDSFSSLGSLEHLDLSYNYLSN 88
>pdb|1M0Z|A Chain A, Crystal Structure Of The Von Willebrand Factor Binding
Domain Of Glycoprotein Ib Alpha
pdb|1M0Z|B Chain B, Crystal Structure Of The Von Willebrand Factor Binding
Domain Of Glycoprotein Ib Alpha
Length = 290
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Query: 102 LASLELQDNDLSGTLPDFLGSMTHLQSLNLANNKFSGSIPATWSQLSNLKHLDLSSNNLT 161
L L L+ N+L P L L+ L+LANN+ + + L NL L L N+L
Sbjct: 126 LQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLNGLENLDTLLLQENSLY 185
Query: 162 GRIPMQLFSVATFNFTGTH 180
IP F F H
Sbjct: 186 -TIPKGFFGSHLLPFAFLH 203
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 279 IGQGGFGKVYKGVLS----DNTKVAVKRLQ-DYYS-PGGEAAFQREVHLISVAIHKNLLQ 332
+G G FG V +G VAVK L+ D S P F REV+ + H+NL++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 333 LIGYCTTSSERIL 345
L G T +++
Sbjct: 80 LYGVVLTPPMKMV 92
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 9/72 (12%)
Query: 271 DNFSESNIIGQGGFGKVYKGVLSDNTK----VAVKRL--QDYYSPGGEAAFQREVHLISV 324
D+F +G+G FG VY L+ K VA+K L G E +RE+ + +
Sbjct: 23 DDFEIGRPLGKGKFGNVY---LAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAH 79
Query: 325 AIHKNLLQLIGY 336
H N+L+L Y
Sbjct: 80 LHHPNILRLYNY 91
>pdb|1U0N|D Chain D, The Ternary Von Willebrand Factor A1-Glycoprotein Ibalpha-
Botrocetin Complex
Length = 265
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Query: 102 LASLELQDNDLSGTLPDFLGSMTHLQSLNLANNKFSGSIPATWSQLSNLKHLDLSSNNLT 161
L L L+ N+L P L L+ L+LANN+ + + L NL L L N+L
Sbjct: 126 LQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLNGLENLDTLLLQENSLY 185
Query: 162 GRIPMQLFSVATFNFTGTH 180
IP F F H
Sbjct: 186 -TIPKGFFGSHLLPFAFLH 203
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Query: 279 IGQGGFGKVYKGVLS----DNTKVAVKRLQ-DYYS-PGGEAAFQREVHLISVAIHKNLLQ 332
+G G FG V +G VAVK L+ D S P F REV+ + H+NL++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 333 LIGYCTTSSERILV 346
L G T +++
Sbjct: 86 LYGVVLTPPMKMVT 99
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 29/57 (50%)
Query: 279 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIG 335
+G G FGKVYK + +A ++ + S + E+ +++ H +++L+G
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLG 75
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 29/59 (49%)
Query: 277 NIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIG 335
++G+G FG+ K + +V V + + + F +EV ++ H N+L+ IG
Sbjct: 16 EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIG 74
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 18/115 (15%)
Query: 279 IGQGGFGKV---YKGVLSDNTKVAVKRLQDYYSPGGEAAFQ-REVHLISVAIHKNLLQLI 334
IG G G V Y +L N VA+K+L + A RE+ L+ V HKN++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 335 GYCTTS---SERILVYPFMQ----NLSVAYRLRVSHK-----IYTKIISLSSLHC 377
T E VY M+ NLS ++ + H+ +Y ++ + LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHS 144
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 29/57 (50%)
Query: 279 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIG 335
+G G FGKVYK + +A ++ + S + E+ +++ H +++L+G
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLG 83
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 18/115 (15%)
Query: 279 IGQGGFGKV---YKGVLSDNTKVAVKRLQDYYSPGGEAAFQ-REVHLISVAIHKNLLQLI 334
IG G G V Y +L N VA+K+L + A RE+ L+ V HKN++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 335 GYCTTS---SERILVYPFMQ----NLSVAYRLRVSHK-----IYTKIISLSSLHC 377
T E VY M+ NLS ++ + H+ +Y ++ + LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHS 144
>pdb|2Z80|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
pdb|2Z80|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 353
Score = 29.3 bits (64), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 74 RNGNVISLTLGSNGFSGKISPSITKLKFLASLELQDNDLSGTLPDFLGSMTHLQSLNLAN 133
RNG + GS+G I +T+ + SL+L +N ++ L +LQ+L L +
Sbjct: 32 RNG----ICKGSSGSLNSIPSGLTEA--VKSLDLSNNRITYISNSDLQRCVNLQALVLTS 85
Query: 134 NKFSGSIPATWSQLSNLKHLDLSSNNLTG 162
N + ++S L +L+HLDLS N L+
Sbjct: 86 NGINTIEEDSFSSLGSLEHLDLSYNYLSN 114
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 29.3 bits (64), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 18/115 (15%)
Query: 279 IGQGGFGKV---YKGVLSDNTKVAVKRLQDYYSPGGEAAFQ-REVHLISVAIHKNLLQLI 334
IG G G V Y +L N VA+K+L + A RE+ L+ V HKN++ L+
Sbjct: 32 IGSGAQGIVVAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 335 GYCTTS---SERILVYPFMQ----NLSVAYRLRVSHK-----IYTKIISLSSLHC 377
T E VY M+ NLS ++ + H+ +Y ++ + LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHS 144
>pdb|3G3A|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|C Chain C, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|E Chain E, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|G Chain G, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
Length = 178
Score = 29.3 bits (64), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 105 LELQDNDLSGTLPDFLGSMTHLQSLNLANNKFSGSIPATWSQLSNLKHLDLSSNNLTGRI 164
L L DN ++ P +T L L+L NN+ + + +L+ L L L+ N L I
Sbjct: 43 LYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKS-I 101
Query: 165 PMQLF 169
P F
Sbjct: 102 PRGAF 106
>pdb|3RFJ|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 279
Score = 29.3 bits (64), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 77 NVISLTLGSNGFSGKISPSITKLKFLASLELQDNDLSGTLPD-FLGSMTHLQSLNLANNK 135
N+ L L N + KL L L L +N L +LPD +T+L L L +N+
Sbjct: 86 NLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQ-SLPDGVFDKLTNLTYLYLYHNQ 144
Query: 136 FSGSIPATWSQLSNLKHLDLSSNNLTGRIPMQLFSVAT 173
+ +L+NL LDL +N L +P +F T
Sbjct: 145 LQSLPKGVFDKLTNLTRLDLDNNQLQS-LPEGVFDKLT 181
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 29.3 bits (64), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/87 (22%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Query: 266 LQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVA 325
++L + + +G G FG V G VAVK +++ E F +E +
Sbjct: 3 MELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKE--GSMSEDEFFQEAQTMMKL 60
Query: 326 IHKNLLQLIGYCTTSSERILVYPFMQN 352
H L++ G C+ +V ++ N
Sbjct: 61 SHPKLVKFYGVCSKEYPIYIVTEYISN 87
>pdb|1SQ0|B Chain B, Crystal Structure Of The Complex Of The Wild-Type Von
Willebrand Factor A1 Domain And Glycoprotein Ib Alpha At
2.6 Angstrom Resolution
Length = 288
Score = 28.9 bits (63), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 32/79 (40%), Gaps = 1/79 (1%)
Query: 102 LASLELQDNDLSGTLPDFLGSMTHLQSLNLANNKFSGSIPATWSQLSNLKHLDLSSNNLT 161
L L L+ N+L P L L+ L+LANN + + L NL L L N+L
Sbjct: 126 LQELYLKGNELKTLPPGLLTPTPKLEKLSLANNDLTELPAGLLNGLENLDTLLLQENSLY 185
Query: 162 GRIPMQLFSVATFNFTGTH 180
IP F F H
Sbjct: 186 -TIPKGFFGSHLLPFAFLH 203
>pdb|3G39|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor
Length = 170
Score = 28.9 bits (63), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 105 LELQDNDLSGTLPDFLGSMTHLQSLNLANNKFSGSIPATWSQLSNLKHLDLSSNNLTGRI 164
L L DN ++ P +T L L+L NN+ + + +L+ L L L+ N L I
Sbjct: 35 LYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKS-I 93
Query: 165 PMQLF 169
P F
Sbjct: 94 PRGAF 98
>pdb|1P9A|G Chain G, Crystal Structure Of N-terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-alpha At 1.7 Angstrom
Resolution
pdb|1QYY|A Chain A, Crystal Structure Of N-Terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-Alpha At 2.8 Angstrom
Resolution
pdb|1QYY|G Chain G, Crystal Structure Of N-Terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-Alpha At 2.8 Angstrom
Resolution
Length = 290
Score = 28.9 bits (63), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 32/79 (40%), Gaps = 1/79 (1%)
Query: 102 LASLELQDNDLSGTLPDFLGSMTHLQSLNLANNKFSGSIPATWSQLSNLKHLDLSSNNLT 161
L L L+ N+L P L L+ L+LANN + + L NL L L N+L
Sbjct: 126 LQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY 185
Query: 162 GRIPMQLFSVATFNFTGTH 180
IP F F H
Sbjct: 186 -TIPKGFFGSHLLPFAFLH 203
>pdb|1P8V|A Chain A, Crystal Structure Of The Complex Of Platelet Receptor
Gpib-alpha And Alpha-thrombin At 2.6a
Length = 279
Score = 28.9 bits (63), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 32/79 (40%), Gaps = 1/79 (1%)
Query: 102 LASLELQDNDLSGTLPDFLGSMTHLQSLNLANNKFSGSIPATWSQLSNLKHLDLSSNNLT 161
L L L+ N+L P L L+ L+LANN + + L NL L L N+L
Sbjct: 126 LQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY 185
Query: 162 GRIPMQLFSVATFNFTGTH 180
IP F F H
Sbjct: 186 -TIPKGFFGSHLLPFAFLH 203
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 28.9 bits (63), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 8/99 (8%)
Query: 87 GFSGKISPSITKLKFLASLE---LQDNDLSGTLPDFLGSMTHLQSLNLANNKFSGSIPAT 143
FS IT LK L L + +N ++ P L ++T+L L L NN+ + P
Sbjct: 69 NFSNNQLTDITPLKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP-- 124
Query: 144 WSQLSNLKHLDLSSNNLTGRIPMQ-LFSVATFNFTGTHL 181
L+NL L+LSSN ++ + L S+ NF+ +
Sbjct: 125 LKNLTNLNRLELSSNTISDISALSGLTSLQQLNFSSNQV 163
Score = 28.5 bits (62), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 120 LGSMTHLQSLNLANNKFSGSIPATWSQLSNLKHLDLSSNNLTGRIPM 166
L S+T+L L+LANN+ S P S L+ L L L +N ++ P+
Sbjct: 235 LASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPL 279
>pdb|2XOT|A Chain A, Crystal Structure Of Neuronal Leucine Rich Repeat Protein
Amigo-1
pdb|2XOT|B Chain B, Crystal Structure Of Neuronal Leucine Rich Repeat Protein
Amigo-1
Length = 361
Score = 28.9 bits (63), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 101 FLASLELQDNDLSGTLPDFLGS-MTHLQSLNLANNKFSGSIPATWSQLSNLKHLDLSSNN 159
+ A L+L N+LS ++ + +T+L SL L++N + + + NL++LDLSSN+
Sbjct: 40 YTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNH 99
Query: 160 L 160
L
Sbjct: 100 L 100
>pdb|3G3B|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|C Chain C, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|E Chain E, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|G Chain G, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
Length = 170
Score = 28.9 bits (63), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 105 LELQDNDLSGTLPDFLGSMTHLQSLNLANNKFSGSIPATWSQLSNLKHLDLSSNNLTGRI 164
L L DN ++ P +T L L+L NN+ + + +L+ L L L+ N L I
Sbjct: 35 LYLYDNRITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKS-I 93
Query: 165 PMQLF 169
P F
Sbjct: 94 PRGAF 98
>pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 28.9 bits (63), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
Query: 87 GFSGKISPSITKLKFLASLE---LQDNDLSGTLPDFLGSMTHLQSLNLANNKFSGSIPAT 143
FS IT LK L L + +N ++ P L ++T+L L L NN+ + P
Sbjct: 69 NFSNNQLTDITPLKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP-- 124
Query: 144 WSQLSNLKHLDLSSN 158
L+NL L+LSSN
Sbjct: 125 LKNLTNLNRLELSSN 139
Score = 28.5 bits (62), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 120 LGSMTHLQSLNLANNKFSGSIPATWSQLSNLKHLDLSSNNLTGRIPM 166
L S+T+L L+LANN+ S P S L+ L L L +N ++ P+
Sbjct: 234 LASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPL 278
>pdb|1GWB|B Chain B, Structure Of Glycoprotein 1b
pdb|1GWB|A Chain A, Structure Of Glycoprotein 1b
Length = 281
Score = 28.9 bits (63), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 32/79 (40%), Gaps = 1/79 (1%)
Query: 102 LASLELQDNDLSGTLPDFLGSMTHLQSLNLANNKFSGSIPATWSQLSNLKHLDLSSNNLT 161
L L L+ N+L P L L+ L+LANN + + L NL L L N+L
Sbjct: 127 LQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY 186
Query: 162 GRIPMQLFSVATFNFTGTH 180
IP F F H
Sbjct: 187 -TIPKGFFGSHLLPFAFLH 204
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 28.9 bits (63), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 273 FSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQD 305
F++ IG+G FG+V+KG+ + KV ++ D
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIID 41
>pdb|2R9U|A Chain A, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|B Chain B, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|C Chain C, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|D Chain D, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
Length = 174
Score = 28.5 bits (62), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 105 LELQDNDLSGTLPDFLGSMTHLQSLNLANNKFSGSIPATWSQLSNLKHLDLSSNNLTGRI 164
L L +N ++ P + +LQ L +NK + + +L+ L LDL+ N+L I
Sbjct: 38 LWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKS-I 96
Query: 165 PMQLFS 170
P F
Sbjct: 97 PRGAFD 102
Score = 28.1 bits (61), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 121 GSMTHLQSLNLANNKFSGSIPATWSQLSNLKHLDLSSNNLTGRIPMQLFSVAT 173
G T Q L L NN+ + P + L NL+ L +SN LT IP +F T
Sbjct: 30 GIPTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTA-IPTGVFDKLT 81
>pdb|1OOK|G Chain G, Crystal Structure Of The Complex Of Platelet Receptor
Gpib-alpha And Human Alpha-thrombin
Length = 290
Score = 28.5 bits (62), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 32/79 (40%), Gaps = 1/79 (1%)
Query: 102 LASLELQDNDLSGTLPDFLGSMTHLQSLNLANNKFSGSIPATWSQLSNLKHLDLSSNNLT 161
L L L+ N+L P L L+ L+LANN + + L NL L L N+L
Sbjct: 126 LQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY 185
Query: 162 GRIPMQLFSVATFNFTGTH 180
IP F F H
Sbjct: 186 -TIPKGFFGSHLLPFAFLH 203
>pdb|2JE0|A Chain A, Crystal Structure Of Pp32
pdb|2JE0|B Chain B, Crystal Structure Of Pp32
pdb|2JE0|C Chain C, Crystal Structure Of Pp32
pdb|2JE0|D Chain D, Crystal Structure Of Pp32
pdb|2JE0|E Chain E, Crystal Structure Of Pp32
pdb|2JE0|F Chain F, Crystal Structure Of Pp32
pdb|2JE1|A Chain A, The Crystal Structure Of The Tumor Supressor Protein Pp32
( Anp32a):structural Insights Into The Anp32 Family Of
Proteins
pdb|2JE1|B Chain B, The Crystal Structure Of The Tumor Supressor Protein Pp32
( Anp32a):structural Insights Into The Anp32 Family Of
Proteins
pdb|2JE1|C Chain C, The Crystal Structure Of The Tumor Supressor Protein Pp32
( Anp32a):structural Insights Into The Anp32 Family Of
Proteins
pdb|2JE1|D Chain D, The Crystal Structure Of The Tumor Supressor Protein Pp32
( Anp32a):structural Insights Into The Anp32 Family Of
Proteins
Length = 149
Score = 28.5 bits (62), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 106 ELQDNDLSGTLPDFLGSMTHLQSLNLANNKFSG-SIPATWSQLSNLKHLDL 155
EL DN +SG L +L LNL+ NK S +L NLK LDL
Sbjct: 70 ELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDL 120
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 28.5 bits (62), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 87 GFSGKISPSITKLKFLASLE---LQDNDLSGTLPDFLGSMTHLQSLNLANNKFSGSIPAT 143
FS IT LK L L + +N ++ P L ++T+L L L NN+ + P
Sbjct: 69 NFSNNQLTDITPLKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP-- 124
Query: 144 WSQLSNLKHLDLSSNNLT 161
L+NL L+LSSN ++
Sbjct: 125 LKNLTNLNRLELSSNTIS 142
Score = 28.5 bits (62), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 120 LGSMTHLQSLNLANNKFSGSIPATWSQLSNLKHLDLSSNNLTGRIPM 166
L S+T+L L+LANN+ S P S L+ L L L +N ++ P+
Sbjct: 235 LASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPL 279
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 28.5 bits (62), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 273 FSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQD 305
F++ IG+G FG+V+KG+ + KV ++ D
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIID 61
>pdb|3PMH|G Chain G, Mechanism Of Sulfotyrosine-Mediated Glycoprotein Ib
Interaction With Two Distinct Alpha-Thrombin Sites
Length = 290
Score = 28.5 bits (62), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 32/79 (40%), Gaps = 1/79 (1%)
Query: 102 LASLELQDNDLSGTLPDFLGSMTHLQSLNLANNKFSGSIPATWSQLSNLKHLDLSSNNLT 161
L L L+ N+L P L L+ L+LANN + + L NL L L N+L
Sbjct: 126 LQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY 185
Query: 162 GRIPMQLFSVATFNFTGTH 180
IP F F H
Sbjct: 186 -TIPKGFFGSHLLPFAFLH 203
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 28.5 bits (62), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 273 FSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQD 305
F++ IG+G FG+V+KG+ + KV ++ D
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIID 41
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 28.5 bits (62), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 120 LGSMTHLQSLNLANNKFSGSIPATWSQLSNLKHLDLSSNNLTGRIPM 166
L S+T+L L+LANN+ S P S L+ L L L +N ++ P+
Sbjct: 239 LASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPL 283
Score = 28.5 bits (62), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 87 GFSGKISPSITKLKFLASLE---LQDNDLSGTLPDFLGSMTHLQSLNLANNKFSGSIPAT 143
FS IT LK L L + +N ++ P L ++T+L L L NN+ + P
Sbjct: 74 NFSNNQLTDITPLKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP-- 129
Query: 144 WSQLSNLKHLDLSSNNLT 161
L+NL L+LSSN ++
Sbjct: 130 LKNLTNLNRLELSSNTIS 147
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 28.5 bits (62), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 273 FSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQD 305
F++ IG+G FG+V+KG+ + KV ++ D
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIID 56
>pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 28.5 bits (62), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
Query: 87 GFSGKISPSITKLKFLASLE---LQDNDLSGTLPDFLGSMTHLQSLNLANNKFSGSIPAT 143
FS IT LK L L + +N ++ P L ++T+L L L NN+ + P
Sbjct: 69 NFSNNQLTDITPLKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP-- 124
Query: 144 WSQLSNLKHLDLSSN 158
L+NL L+LSSN
Sbjct: 125 LKNLTNLNRLELSSN 139
Score = 28.5 bits (62), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 120 LGSMTHLQSLNLANNKFSGSIPATWSQLSNLKHLDLSSNNLTGRIPM 166
L S+T+L L+LANN+ S P S L+ L L L +N ++ P+
Sbjct: 234 LASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPL 278
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 28.5 bits (62), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 10/79 (12%)
Query: 265 ELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAF--------- 315
EL ++ I G +G V GV S+ VA+KR+ + S G
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 316 -QREVHLISVAIHKNLLQL 333
RE+ L++ H N+L L
Sbjct: 76 VLREIRLLNHFHHPNILGL 94
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 28.5 bits (62), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 87 GFSGKISPSITKLKFLASLE---LQDNDLSGTLPDFLGSMTHLQSLNLANNKFSGSIPAT 143
FS IT LK L L + +N ++ P L ++T+L L L NN+ + P
Sbjct: 69 NFSNNQLTDITPLKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP-- 124
Query: 144 WSQLSNLKHLDLSSNNLT 161
L+NL L+LSSN ++
Sbjct: 125 LKNLTNLNRLELSSNTIS 142
Score = 28.5 bits (62), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 120 LGSMTHLQSLNLANNKFSGSIPATWSQLSNLKHLDLSSNNLTGRIPM 166
L S+T+L L+LANN+ S P S L+ L L L +N ++ P+
Sbjct: 235 LASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPL 279
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 28.5 bits (62), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 120 LGSMTHLQSLNLANNKFSGSIPATWSQLSNLKHLDLSSNNLTGRIPM 166
L S+T+L L+LANN+ S P S L+ L L L +N ++ P+
Sbjct: 238 LASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPL 282
Score = 28.5 bits (62), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 87 GFSGKISPSITKLKFLASLE---LQDNDLSGTLPDFLGSMTHLQSLNLANNKFSGSIPAT 143
FS IT LK L L + +N ++ P L ++T+L L L NN+ + P
Sbjct: 73 NFSNNQLTDITPLKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP-- 128
Query: 144 WSQLSNLKHLDLSSNNLT 161
L+NL L+LSSN ++
Sbjct: 129 LKNLTNLNRLELSSNTIS 146
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 28.5 bits (62), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 10/79 (12%)
Query: 265 ELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAF--------- 315
EL ++ I G +G V GV S+ VA+KR+ + S G
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 316 -QREVHLISVAIHKNLLQL 333
RE+ L++ H N+L L
Sbjct: 76 VLREIRLLNHFHHPNILGL 94
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 28.5 bits (62), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Query: 279 IGQGGFGKVYKGVL----SDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLI 334
IG+G FG V++G+ + VA+K ++ S F +E + H ++++LI
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 335 GYCTTSSERILV 346
G T + I++
Sbjct: 75 GVITENPVWIIM 86
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 28.5 bits (62), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 7/68 (10%)
Query: 279 IGQGGFGKV----YKGVLSDNTK--VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQ 332
+G+G FGKV Y +D T VAVK L+ P + +++E+ ++ H+++++
Sbjct: 39 LGEGHFGKVSLYCYDPT-NDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIK 97
Query: 333 LIGYCTTS 340
G C +
Sbjct: 98 YKGCCEDA 105
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 28.5 bits (62), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Query: 262 SCRELQLATDNFSESNIIGQGGFGKVY--KGVLSDNTKVAVKRL-QDYYSPGGEAAFQRE 318
SC + Q N+ IG+G F KV + +L+ +VA+K + + +P RE
Sbjct: 6 SCADEQPHIGNYRLLKTIGKGNFAKVKLARHILT-GREVAIKIIDKTQLNPTSLQKLFRE 64
Query: 319 VHLISVAIHKNLLQLIGYCTTSSERILVYPF 349
V ++ + H N+++L T L+ +
Sbjct: 65 VRIMKILNHPNIVKLFEVIETEKTLYLIMEY 95
>pdb|3V47|A Chain A, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
pdb|3V47|B Chain B, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
Length = 455
Score = 28.1 bits (61), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 102 LASLELQDNDLSGTLPDFLGSMTHLQSLNLANNKFSGSIPA-TWSQLSNLKHLDLSSNNL 160
L L L N+++ + +THL LNL+ N F GSI + + L L+ LDLS N++
Sbjct: 301 LEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQN-FLGSIDSRMFENLDKLEVLDLSYNHI 359
>pdb|4ECO|A Chain A, Crystal Structure Of A Hypothetical Protein (Bacegg_03329)
From Bacteroides Eggerthii Dsm 20697 At 2.70 A
Resolution
pdb|4ECO|B Chain B, Crystal Structure Of A Hypothetical Protein (Bacegg_03329)
From Bacteroides Eggerthii Dsm 20697 At 2.70 A
Resolution
Length = 636
Score = 28.1 bits (61), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 125 HLQSLNLANNKFSGSIPATWSQLSNLKHLDLSSNNLTGRIPMQLFSVATFNFTGTHLICG 184
++ S+NL+NN+ S +S S L ++L N LT IP NF T+L+
Sbjct: 434 NVSSINLSNNQISKFPKELFSTGSPLSSINLXGNXLT-EIPKNSLKDENENFKNTYLLTS 492
Query: 185 SSL 187
L
Sbjct: 493 IDL 495
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 28.1 bits (61), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 274 SESNIIGQGGFGKVYK-GVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQ 332
S++ I+G G FG+V+K + K+A K ++ E + E+ +++ H NL+Q
Sbjct: 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEV-KNEISVMNQLDHANLIQ 150
Query: 333 LIGYCTTSSERILVYPFM 350
L + ++ +LV ++
Sbjct: 151 LYDAFESKNDIVLVMEYV 168
>pdb|1NFP|A Chain A, Structural Refinement Of The Non-Fluorescent
Flavoprotein From Photobacterium Leiognathi At 1.60
Angstroms Resolution
Length = 228
Score = 28.1 bits (61), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 14 MTKWLILVIFLNFGH-SSREPDVEGEALIEVLKALND 49
MTKW V FLNF H +EP + +E L+ +++
Sbjct: 1 MTKWNYGVFFLNFYHVGQQEPSLTMSNALETLRIIDE 37
>pdb|2JQD|A Chain A, Structure Of The Leucine-Rich Repeat Domain Of Lanp
Length = 169
Score = 28.1 bits (61), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 7/58 (12%)
Query: 131 LANNKFSGSIPATWSQLSNLKHLDLSSN---NLTGRIPMQ----LFSVATFNFTGTHL 181
L+ N+ SG + + NLKHL+LS N +L+ P++ L S+ FN T+L
Sbjct: 76 LSENRISGDLEVLAEKCPNLKHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNL 133
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.136 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,684,036
Number of Sequences: 62578
Number of extensions: 420507
Number of successful extensions: 2113
Number of sequences better than 100.0: 585
Number of HSP's better than 100.0 without gapping: 224
Number of HSP's successfully gapped in prelim test: 361
Number of HSP's that attempted gapping in prelim test: 1445
Number of HSP's gapped (non-prelim): 742
length of query: 380
length of database: 14,973,337
effective HSP length: 101
effective length of query: 279
effective length of database: 8,652,959
effective search space: 2414175561
effective search space used: 2414175561
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 52 (24.6 bits)