Your job contains 1 sequence.
>016906
MVDDRLLERERQQIEQIRQLDFEELQVEEVDDFHDSSDDDDRAATGADSSNQLTFDTCLA
SLHTYLGDVEDTHNRMAFLEGGAILTLPLFYLDGVVLFPEATLPLRVIKPNFIAAAERAL
SQVDVPYTIGVVRVFREPDNGRITFATIGTTAEIRQYRRLEDGSLNVVTRGQQRFRLRRR
WIDVEGVPCGEIQIIQEDLPLRTPRDVFETLGCVSNLSQSLSHTLPSNSSSRGYGIRDND
SDATSEESFESELSPTERRIHQSVIDFAYGCDIMDESTSSDDDKSAFQSDIQSRRPHLND
SDSIGNWKQSENVGLRIGKSSALGRQSHRGEGSKMCWRNELSQFRRTSRAFLPHWVYRMY
DSYCLAQRAAGSLTLLFVLS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 016906
(380 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2043500 - symbol:AT2G25740 species:3702 "Arabi... 735 9.6e-73 1
ZFIN|ZDB-GENE-040822-43 - symbol:crbn "cereblon" species:... 137 4.2e-08 3
UNIPROTKB|F1SFL6 - symbol:CRBN "Uncharacterized protein" ... 131 1.2e-06 2
UNIPROTKB|J3QT87 - symbol:CRBN "Protein cereblon" species... 130 1.3e-06 2
UNIPROTKB|Q5R6Y2 - symbol:CRBN "Protein cereblon" species... 131 1.4e-06 2
UNIPROTKB|Q96SW2 - symbol:CRBN "Protein cereblon" species... 130 1.9e-06 2
UNIPROTKB|J3QT51 - symbol:CRBN "Protein cereblon" species... 130 2.7e-06 1
UNIPROTKB|Q0P564 - symbol:CRBN "Protein cereblon" species... 128 4.2e-06 2
UNIPROTKB|P0CF65 - symbol:CRBN "Protein cereblon" species... 123 6.2e-06 2
RGD|1310533 - symbol:Crbn "cereblon" species:10116 "Rattu... 124 1.2e-05 2
MGI|MGI:1913277 - symbol:Crbn "cereblon" species:10090 "M... 123 1.6e-05 2
UNIPROTKB|Q640S2 - symbol:crbn "Protein cereblon" species... 115 2.5e-05 2
UNIPROTKB|F1P3S5 - symbol:CRBN "Protein cereblon" species... 123 3.5e-05 2
>TAIR|locus:2043500 [details] [associations]
symbol:AT2G25740 species:3702 "Arabidopsis thaliana"
[GO:0004176 "ATP-dependent peptidase activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] InterPro:IPR003111 Pfam:PF02190
SMART:SM00464 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006508
InterPro:IPR015947 SUPFAM:SSF88697 GO:GO:0004176 eggNOG:NOG313031
KO:K11793 EMBL:BT021104 IPI:IPI00538676 RefSeq:NP_850069.1
UniGene:At.38982 ProteinModelPortal:Q5E916 SMR:Q5E916 PRIDE:Q5E916
EnsemblPlants:AT2G25740.1 GeneID:817117 KEGG:ath:AT2G25740
TAIR:At2g25740 HOGENOM:HOG000005802 InParanoid:Q5E916 OMA:QSEANSE
PhylomeDB:Q5E916 ProtClustDB:CLSN2690918 Genevestigator:Q5E916
Uniprot:Q5E916
Length = 547
Score = 735 (263.8 bits), Expect = 9.6e-73, P = 9.6e-73
Identities = 170/370 (45%), Positives = 224/370 (60%)
Query: 21 DFEELQVEEVXXXXXXXX------------XXXXXXXXXXXXNQLTFDTCLASLHTYLGD 68
DFEELQVEEV ++L F+ LASLH YLG+
Sbjct: 21 DFEELQVEEVDDLHDSDSDDNNDDLSSFPFSSHAQASGNLGDDELMFNPALASLHMYLGE 80
Query: 69 VEDTHNRMAFLEGGAILTLPLFYLDGVVLFPEATLPLRVIKPNFIAAAERALSQVDVPYT 128
VEDT NR++F++GG +L +PLFYL+GVVLFPEATLPLR+I+P+F+AA ERAL+Q + P T
Sbjct: 81 VEDTQNRVSFVDGGTVLKIPLFYLEGVVLFPEATLPLRIIQPSFLAAVERALNQANAPST 140
Query: 129 IGVVRVFREPDNGRITFATIGTTAEIRQYRRLEDGSLNVVTXXXXXXXXXXXWIDVEGVP 188
IGV+RV+RE + +A++GTTAEIRQYRRL DGS NV+T W DVEG
Sbjct: 141 IGVIRVYRE--GAQFKYASVGTTAEIRQYRRLGDGSFNVITRGQQRFRLKHRWTDVEGFT 198
Query: 189 CGEIQIIQEDLPLRTPRDVFETLGCVSNLXXXXXXXXXXXXXXRGYGIRDND--SDATSE 246
CGE+QI+ ED+PLRTPRD F L +S L +RD D S+A SE
Sbjct: 199 CGEVQIVDEDVPLRTPRDAFGKLVPLSKLRGRYPLGTASLSTP----LRDMDAQSEANSE 254
Query: 247 ESFESELSPTERRIHQSVIDFAYGCDIMDESTSSDDDKSAFQSDIQSRRPHLNDSDSIG- 305
ESFES LSP+E+R+H SV+D + C+ STSSDDD+ S +QS + SIG
Sbjct: 255 ESFESALSPSEKRLHYSVVDSIF-CN----STSSDDDQVVSTSTVQSSGSNPYSLRSIGC 309
Query: 306 ----NWKQSENVGLRIGKSSALGRQSHRGEGSKMCWRN--ELSQFRRTSRAFLPHWVYRM 359
+ ++E+ IGK+ + ++ ++ + +R +LS+FR T RAF P W YRM
Sbjct: 310 LASSHDNENEDEQSAIGKTP-VSQEKYQKQNRLASFRQNTDLSRFRMTPRAFWPFWAYRM 368
Query: 360 YDSYCLAQRA 369
+DSY LAQRA
Sbjct: 369 FDSYYLAQRA 378
>ZFIN|ZDB-GENE-040822-43 [details] [associations]
symbol:crbn "cereblon" species:7955 "Danio rerio"
[GO:0004176 "ATP-dependent peptidase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0035118 "embryonic
pectoral fin morphogenesis" evidence=IMP] [GO:0071600 "otic vesicle
morphogenesis" evidence=IMP] [GO:0060173 "limb development"
evidence=IMP] [GO:0000151 "ubiquitin ligase complex" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0031464 "Cul4A-RING ubiquitin
ligase complex" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] InterPro:IPR003111
Pfam:PF02190 ZFIN:ZDB-GENE-040822-43 GO:GO:0006508
InterPro:IPR015947 SUPFAM:SSF88697 GO:GO:0000151 GO:GO:0035118
GO:GO:0004176 GeneTree:ENSGT00390000016404 GO:GO:0071600
EMBL:BX936393 IPI:IPI00639664 Ensembl:ENSDART00000062724
Bgee:F1QCS1 Uniprot:F1QCS1
Length = 446
Score = 137 (53.3 bits), Expect = 4.2e-08, Sum P(3) = 4.2e-08
Identities = 38/118 (32%), Positives = 61/118 (51%)
Query: 53 LTFDTCLASLHTYLG-DVEDTHNRMAFLEGGAILTLPLFYLDGVVLFPEATLPLRVIKPN 111
+ FDT L + H YLG D+E+ H R E ++ LP+ ++L P TLPL++ +P
Sbjct: 50 INFDTSLPTSHAYLGSDMEEFHGRTLHDED-SVQNLPVLPHVALILIPGQTLPLQLFRPQ 108
Query: 112 FIAAAERALSQVDVPYTIGVVRVFREPD-NGRITFATIGTTAEIRQYRRLEDGSLNVV 168
++ +SQ D + + + PD +G T A GTTAEI +R ++ + V
Sbjct: 109 EVSMFRNLVSQ-DRTFAV----LAHSPDPSGTETKAEFGTTAEIYAFREEQEYGIETV 161
Score = 54 (24.1 bits), Expect = 4.2e-08, Sum P(3) = 4.2e-08
Identities = 14/41 (34%), Positives = 17/41 (41%)
Query: 334 KMCWRN-ELSQFRRTSRAFLPHWVYRMYDSYCLAQRAAGSL 373
K C +N + S P WVY +YDS L R L
Sbjct: 226 KRCSQNYRQKKLHCASMTSWPPWVYSLYDSKTLMSRVKKQL 266
Score = 37 (18.1 bits), Expect = 4.2e-08, Sum P(3) = 4.2e-08
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 307 WKQSENVGLRIGKSSALGRQSHR 329
+++ + G+ K A+GRQ R
Sbjct: 150 FREEQEYGIETVKIKAVGRQRFR 172
>UNIPROTKB|F1SFL6 [details] [associations]
symbol:CRBN "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0031464 "Cul4A-RING ubiquitin
ligase complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0004176 "ATP-dependent
peptidase activity" evidence=IEA] InterPro:IPR003111 Pfam:PF02190
SMART:SM00464 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161
InterPro:IPR015947 SUPFAM:SSF88697 GO:GO:0004176
GeneTree:ENSGT00390000016404 OMA:IRTQSDG GO:GO:0031464
EMBL:CU914461 Ensembl:ENSSSCT00000012620 Uniprot:F1SFL6
Length = 387
Score = 131 (51.2 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 38/119 (31%), Positives = 59/119 (49%)
Query: 51 NQLTFDTCLASLHTYLG-DVEDTHNRMAFLEGGAILTLPLFYLDGVVLFPEATLPLRVIK 109
N + FDT L + HTYLG D+E+ H R + + +P+ ++L P TLPL++
Sbjct: 49 NIINFDTSLPTSHTYLGSDMEEFHGRTLH-DDDSCQVIPVLPQVMMILIPGQTLPLQLFS 107
Query: 110 PNFIAAAERALSQVDVPYTIGVVRVFREPDNGRITFATIGTTAEIRQYRRLEDGSLNVV 168
P ++ R L Q D + + +E + A GTTAEI YR +D + +V
Sbjct: 108 PQEVSMV-RNLIQKDRTFAVLAYSNVQERE------AQFGTTAEIYAYREEQDFGIEIV 159
Score = 47 (21.6 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 337 WRN-ELSQFRRTSRAFLPHWVYRMYDSYCLAQR 368
W+ + +F + P W+Y +YD+ L R
Sbjct: 228 WQKYQKRKFHCANLTSWPRWLYSLYDAETLMDR 260
>UNIPROTKB|J3QT87 [details] [associations]
symbol:CRBN "Protein cereblon" species:9606 "Homo sapiens"
[GO:0004176 "ATP-dependent peptidase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] InterPro:IPR003111
Pfam:PF02190 SMART:SM00464 GO:GO:0006508 InterPro:IPR015947
SUPFAM:SSF88697 GO:GO:0004176 EMBL:AC024060 HGNC:HGNC:30185
ProteinModelPortal:J3QT87 Ensembl:ENST00000424814 Uniprot:J3QT87
Length = 394
Score = 130 (50.8 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 38/119 (31%), Positives = 59/119 (49%)
Query: 51 NQLTFDTCLASLHTYLG-DVEDTHNRMAFLEGGAILTLPLFYLDGVVLFPEATLPLRVIK 109
N + FDT L + HTYLG D+E+ H R + + +P+ ++L P TLPL++
Sbjct: 41 NIINFDTSLPTSHTYLGADMEEFHGRTLH-DDDSCQVIPVLPQVMMILIPGQTLPLQLFH 99
Query: 110 PNFIAAAERALSQVDVPYTIGVVRVFREPDNGRITFATIGTTAEIRQYRRLEDGSLNVV 168
P ++ R L Q D + + +E + A GTTAEI YR +D + +V
Sbjct: 100 PQEVSMV-RNLIQKDRTFAVLAYSNVQERE------AQFGTTAEIYAYREEQDFGIEIV 151
Score = 48 (22.0 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 11/43 (25%), Positives = 19/43 (44%)
Query: 327 SHRGEGSKMCWRN-ELSQFRRTSRAFLPHWVYRMYDSYCLAQR 368
S + S W+ + +F + P W+Y +YD+ L R
Sbjct: 210 SREDQCSYKWWQKYQKRKFHCANLTSWPRWLYSLYDAETLMDR 252
>UNIPROTKB|Q5R6Y2 [details] [associations]
symbol:CRBN "Protein cereblon" species:9601 "Pongo abelii"
[GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0031464 "Cul4A-RING ubiquitin ligase complex" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR003111 Pfam:PF02190
SMART:SM00464 UniPathway:UPA00143 GO:GO:0005634 GO:GO:0005737
GO:GO:0043161 GO:GO:0016020 GO:GO:0016567 InterPro:IPR015947
SUPFAM:SSF88697 GO:GO:0004176 CTD:51185 HOVERGEN:HBG054571
KO:K11793 GO:GO:0031464 EMBL:CR860344 RefSeq:NP_001127555.1
UniGene:Pab.18764 ProteinModelPortal:Q5R6Y2 GeneID:100174633
KEGG:pon:100174633 InParanoid:Q5R6Y2 Uniprot:Q5R6Y2
Length = 429
Score = 131 (51.2 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 38/119 (31%), Positives = 59/119 (49%)
Query: 51 NQLTFDTCLASLHTYLG-DVEDTHNRMAFLEGGAILTLPLFYLDGVVLFPEATLPLRVIK 109
N + FDT L + HTYLG D+E+ H R + + +P+ ++L P TLPL++
Sbjct: 32 NIINFDTSLPTSHTYLGADMEEFHGRTLH-DDDSCQVIPVLPQVMMILIPGQTLPLQLFH 90
Query: 110 PNFIAAAERALSQVDVPYTIGVVRVFREPDNGRITFATIGTTAEIRQYRRLEDGSLNVV 168
P ++ R L Q D + + +E + A GTTAEI YR +D + +V
Sbjct: 91 PQEVSMV-RNLIQKDRTFAVLAYSNIQERE------AQFGTTAEIYAYREEQDFGIEIV 142
Score = 48 (22.0 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 11/43 (25%), Positives = 19/43 (44%)
Query: 327 SHRGEGSKMCWRN-ELSQFRRTSRAFLPHWVYRMYDSYCLAQR 368
S + S W+ + +F + P W+Y +YD+ L R
Sbjct: 201 SREDQCSYKWWQKYQKRKFHCANLTSWPRWLYSLYDAETLMDR 243
>UNIPROTKB|Q96SW2 [details] [associations]
symbol:CRBN "Protein cereblon" species:9606 "Homo sapiens"
[GO:0004176 "ATP-dependent peptidase activity" evidence=IEA]
[GO:0032463 "negative regulation of protein homooligomerization"
evidence=IEA] [GO:0034766 "negative regulation of ion transmembrane
transport" evidence=IEA] [GO:0090073 "positive regulation of
protein homodimerization activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] [GO:0031464 "Cul4A-RING ubiquitin
ligase complex" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR003111 Pfam:PF02190 SMART:SM00464 UniPathway:UPA00143
GO:GO:0005737 GO:GO:0005730 GO:GO:0043161 GO:GO:0016020
GO:GO:0016567 InterPro:IPR015947 SUPFAM:SSF88697 GO:GO:0032463
Orphanet:88616 Orphanet:1620 GO:GO:0004176 CTD:51185
eggNOG:NOG313031 HOGENOM:HOG000067866 HOVERGEN:HBG054571 KO:K11793
OMA:IRTQSDG OrthoDB:EOG44XJGR GO:GO:0031464 EMBL:AK027507
EMBL:AK312577 EMBL:AC024060 EMBL:BC017419 EMBL:BC067811
EMBL:AF117230 EMBL:CR627060 IPI:IPI00045917 IPI:IPI00641620
RefSeq:NP_001166953.1 RefSeq:NP_057386.2 UniGene:Hs.18925
ProteinModelPortal:Q96SW2 IntAct:Q96SW2 STRING:Q96SW2
PhosphoSite:Q96SW2 DMDM:73918916 PaxDb:Q96SW2 PRIDE:Q96SW2
DNASU:51185 Ensembl:ENST00000231948 Ensembl:ENST00000432408
GeneID:51185 KEGG:hsa:51185 UCSC:uc003bpq.3 UCSC:uc003bpr.3
GeneCards:GC03M003166 HGNC:HGNC:30185 HPA:HPA045910 MIM:607417
MIM:609262 neXtProt:NX_Q96SW2 PharmGKB:PA134926851
InParanoid:Q96SW2 PhylomeDB:Q96SW2 GenomeRNAi:51185 NextBio:54159
ArrayExpress:Q96SW2 Bgee:Q96SW2 CleanEx:HS_CRBN
Genevestigator:Q96SW2 GermOnline:ENSG00000113851 GO:GO:0034766
GO:GO:0090073 Uniprot:Q96SW2
Length = 442
Score = 130 (50.8 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 38/119 (31%), Positives = 59/119 (49%)
Query: 51 NQLTFDTCLASLHTYLG-DVEDTHNRMAFLEGGAILTLPLFYLDGVVLFPEATLPLRVIK 109
N + FDT L + HTYLG D+E+ H R + + +P+ ++L P TLPL++
Sbjct: 45 NIINFDTSLPTSHTYLGADMEEFHGRTLH-DDDSCQVIPVLPQVMMILIPGQTLPLQLFH 103
Query: 110 PNFIAAAERALSQVDVPYTIGVVRVFREPDNGRITFATIGTTAEIRQYRRLEDGSLNVV 168
P ++ R L Q D + + +E + A GTTAEI YR +D + +V
Sbjct: 104 PQEVSMV-RNLIQKDRTFAVLAYSNVQERE------AQFGTTAEIYAYREEQDFGIEIV 155
Score = 48 (22.0 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 11/43 (25%), Positives = 19/43 (44%)
Query: 327 SHRGEGSKMCWRN-ELSQFRRTSRAFLPHWVYRMYDSYCLAQR 368
S + S W+ + +F + P W+Y +YD+ L R
Sbjct: 214 SREDQCSYKWWQKYQKRKFHCANLTSWPRWLYSLYDAETLMDR 256
>UNIPROTKB|J3QT51 [details] [associations]
symbol:CRBN "Protein cereblon" species:9606 "Homo sapiens"
[GO:0004176 "ATP-dependent peptidase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] InterPro:IPR003111
Pfam:PF02190 GO:GO:0006508 InterPro:IPR015947 SUPFAM:SSF88697
GO:GO:0004176 EMBL:AC024060 HGNC:HGNC:30185
ProteinModelPortal:J3QT51 Ensembl:ENST00000450014 Uniprot:J3QT51
Length = 228
Score = 130 (50.8 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 38/119 (31%), Positives = 59/119 (49%)
Query: 51 NQLTFDTCLASLHTYLG-DVEDTHNRMAFLEGGAILTLPLFYLDGVVLFPEATLPLRVIK 109
N + FDT L + HTYLG D+E+ H R + + +P+ ++L P TLPL++
Sbjct: 41 NIINFDTSLPTSHTYLGADMEEFHGRTLH-DDDSCQVIPVLPQVMMILIPGQTLPLQLFH 99
Query: 110 PNFIAAAERALSQVDVPYTIGVVRVFREPDNGRITFATIGTTAEIRQYRRLEDGSLNVV 168
P ++ R L Q D + + +E + A GTTAEI YR +D + +V
Sbjct: 100 PQEVSMV-RNLIQKDRTFAVLAYSNVQERE------AQFGTTAEIYAYREEQDFGIEIV 151
>UNIPROTKB|Q0P564 [details] [associations]
symbol:CRBN "Protein cereblon" species:9913 "Bos taurus"
[GO:0031464 "Cul4A-RING ubiquitin ligase complex" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA;ISS] [GO:0016020 "membrane"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] InterPro:IPR003111
Pfam:PF02190 SMART:SM00464 UniPathway:UPA00143 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0016020 GO:GO:0016567
InterPro:IPR015947 SUPFAM:SSF88697 GO:GO:0004176 EMBL:BC120452
IPI:IPI00694957 RefSeq:NP_001068995.1 UniGene:Bt.91518
ProteinModelPortal:Q0P564 MINT:MINT-6823052 STRING:Q0P564
PRIDE:Q0P564 Ensembl:ENSBTAT00000026031 GeneID:511585
KEGG:bta:511585 CTD:51185 eggNOG:NOG313031
GeneTree:ENSGT00390000016404 HOGENOM:HOG000067866
HOVERGEN:HBG054571 InParanoid:Q0P564 KO:K11793 OMA:IRTQSDG
OrthoDB:EOG44XJGR NextBio:20870000 ArrayExpress:Q0P564
GO:GO:0031464 Uniprot:Q0P564
Length = 444
Score = 128 (50.1 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 39/119 (32%), Positives = 58/119 (48%)
Query: 51 NQLTFDTCLASLHTYLG-DVEDTHNRMAFLEGGAILTLPLFYLDGVVLFPEATLPLRVIK 109
N + FDT L + HTYLG D+E+ H R + + +P+ + L P TLPL++
Sbjct: 47 NIINFDTSLPTSHTYLGSDMEEFHGRTLH-DDDSCPVIPVLPQVVMTLIPGQTLPLQLFS 105
Query: 110 PNFIAAAERALSQVDVPYTIGVVRVFREPDNGRITFATIGTTAEIRQYRRLEDGSLNVV 168
P ++ R L Q D + + +E + A GTTAEI YR +D + VV
Sbjct: 106 PQEVSMV-RNLIQKDRTFAVLAYSNVQERE------AQFGTTAEIYAYREEQDFGIEVV 157
Score = 47 (21.6 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 337 WRN-ELSQFRRTSRAFLPHWVYRMYDSYCLAQR 368
W+ + +F + P W+Y +YD+ L R
Sbjct: 226 WQKYQKRKFHCANLTSWPRWLYSLYDAETLMDR 258
>UNIPROTKB|P0CF65 [details] [associations]
symbol:CRBN "Protein cereblon" species:9031 "Gallus gallus"
[GO:0004176 "ATP-dependent peptidase activity" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA;ISS] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0031464 "Cul4A-RING ubiquitin ligase
complex" evidence=ISS] InterPro:IPR003111 Pfam:PF02190
SMART:SM00464 UniPathway:UPA00143 GO:GO:0005634 GO:GO:0005737
GO:GO:0043161 GO:GO:0016567 InterPro:IPR015947 SUPFAM:SSF88697
GO:GO:0004176 HOGENOM:HOG000067866 GO:GO:0031464 EMBL:DR425223
IPI:IPI00585552 ProteinModelPortal:P0CF65 NextBio:20819613
Uniprot:P0CF65
Length = 445
Score = 123 (48.4 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 38/119 (31%), Positives = 57/119 (47%)
Query: 51 NQLTFDTCLASLHTYLG-DVEDTHNRMAFLEGGAILTLPLFYLDGVVLFPEATLPLRVIK 109
N + FDT L + H YLG D+E+ H R + + +P+ V+L P TLPL++
Sbjct: 46 NMINFDTSLPTSHMYLGSDMEEFHGRTLH-DDDSCQVIPVLPHVMVMLIPGQTLPLQLFH 104
Query: 110 PNFIAAAERALSQVDVPYTIGVVRVFREPDNGRITFATIGTTAEIRQYRRLEDGSLNVV 168
P ++ R L Q D + + RE + A GTTAEI YR ++ + V
Sbjct: 105 PQEVSMV-RNLIQKDRTFAVLAYSNVRERE------AHFGTTAEIYAYREEQEYGIETV 156
Score = 51 (23.0 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 337 WRN-ELSQFRRTSRAFLPHWVYRMYDSYCLAQRAAGSL 373
W+ + +F S P W+Y +YD+ L +R L
Sbjct: 226 WQKYQKRKFHCASLTSWPPWLYSLYDAETLMERVKRQL 263
>RGD|1310533 [details] [associations]
symbol:Crbn "cereblon" species:10116 "Rattus norvegicus"
[GO:0004176 "ATP-dependent peptidase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO;ISS;IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;ISO;ISS] [GO:0031464 "Cul4A-RING ubiquitin ligase
complex" evidence=ISO;ISS] [GO:0032463 "negative regulation of
protein homooligomerization" evidence=IDA] [GO:0034766 "negative
regulation of ion transmembrane transport" evidence=IDA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO;ISS] [GO:0090073 "positive regulation of
protein homodimerization activity" evidence=IDA] InterPro:IPR003111
Pfam:PF02190 SMART:SM00464 UniPathway:UPA00143 RGD:1310533
GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0016020
GO:GO:0016567 InterPro:IPR015947 SUPFAM:SSF88697 GO:GO:0032463
GO:GO:0004176 CTD:51185 eggNOG:NOG313031
GeneTree:ENSGT00390000016404 HOGENOM:HOG000067866
HOVERGEN:HBG054571 KO:K11793 OMA:IRTQSDG OrthoDB:EOG44XJGR
GO:GO:0031464 GO:GO:0034766 GO:GO:0090073 EMBL:AY973953
EMBL:BC099779 EMBL:BC127455 IPI:IPI00364564 RefSeq:NP_001015003.1
UniGene:Rn.195259 STRING:Q56AP7 PRIDE:Q56AP7
Ensembl:ENSRNOT00000008873 GeneID:297498 KEGG:rno:297498
UCSC:RGD:1310533 InParanoid:Q56AP7 NextBio:642328
Genevestigator:Q56AP7 GermOnline:ENSRNOG00000006534 Uniprot:Q56AP7
Length = 445
Score = 124 (48.7 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 38/119 (31%), Positives = 59/119 (49%)
Query: 51 NQLTFDTCLASLHTYLG-DVEDTHNRMAFLEGGAILTLPLFYLDGVVLFPEATLPLRVIK 109
N + FDT L + HTYLG D+E+ H R + + +P+ ++L P TLPL++
Sbjct: 48 NIINFDTSLPTSHTYLGADMEEFHGRTLH-DDDSCQVIPVLPEVMMILIPGQTLPLQLSH 106
Query: 110 PNFIAAAERALSQVDVPYTIGVVRVFREPDNGRITFATIGTTAEIRQYRRLEDGSLNVV 168
P ++ R L Q D + + +E + A GTTAEI YR ++ + VV
Sbjct: 107 PQEVSMV-RNLIQKDRTFAVLAYSNVQERE------AQFGTTAEIYAYREEQEFGIEVV 158
Score = 47 (21.6 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 337 WRN-ELSQFRRTSRAFLPHWVYRMYDSYCLAQR 368
W+ + +F + P W+Y +YD+ L R
Sbjct: 227 WQKYQKRKFHCANLTSWPRWLYSLYDAETLMDR 259
>MGI|MGI:1913277 [details] [associations]
symbol:Crbn "cereblon" species:10090 "Mus musculus"
[GO:0004176 "ATP-dependent peptidase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0031464 "Cul4A-RING ubiquitin ligase complex"
evidence=ISO] [GO:0032463 "negative regulation of protein
homooligomerization" evidence=ISO] [GO:0034766 "negative regulation
of ion transmembrane transport" evidence=ISO] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0090073 "positive regulation of protein
homodimerization activity" evidence=ISO] InterPro:IPR003111
Pfam:PF02190 SMART:SM00464 UniPathway:UPA00143 MGI:MGI:1913277
GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0016020
GO:GO:0016567 InterPro:IPR015947 SUPFAM:SSF88697 GO:GO:0032463
GO:GO:0004176 CTD:51185 eggNOG:NOG313031
GeneTree:ENSGT00390000016404 HOVERGEN:HBG054571 KO:K11793
OMA:IRTQSDG OrthoDB:EOG44XJGR GO:GO:0031464 GO:GO:0034766
GO:GO:0090073 EMBL:AK050557 EMBL:AK076144 EMBL:AK077707
EMBL:AK160219 EMBL:BC046967 EMBL:BC069905 EMBL:BC086488
EMBL:AF229032 IPI:IPI00123335 IPI:IPI00387238 IPI:IPI00956787
RefSeq:NP_067424.2 RefSeq:NP_780566.1 UniGene:Mm.290085
ProteinModelPortal:Q8C7D2 STRING:Q8C7D2 PhosphoSite:Q8C7D2
PaxDb:Q8C7D2 PRIDE:Q8C7D2 Ensembl:ENSMUST00000013882
Ensembl:ENSMUST00000049675 Ensembl:ENSMUST00000113239 GeneID:58799
KEGG:mmu:58799 UCSC:uc009dda.1 UCSC:uc009ddb.1 InParanoid:Q8C7D2
NextBio:314364 Bgee:Q8C7D2 CleanEx:MM_CRBN Genevestigator:Q8C7D2
GermOnline:ENSMUSG00000005362 Uniprot:Q8C7D2
Length = 445
Score = 123 (48.4 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 38/119 (31%), Positives = 59/119 (49%)
Query: 51 NQLTFDTCLASLHTYLG-DVEDTHNRMAFLEGGAILTLPLFYLDGVVLFPEATLPLRVIK 109
N + FDT L + HTYLG D+E+ H R + + +P+ ++L P TLPL++
Sbjct: 48 NIINFDTSLPTSHTYLGADMEEFHGRTLH-DDDSCQVIPVLPEVLMILIPGQTLPLQLSH 106
Query: 110 PNFIAAAERALSQVDVPYTIGVVRVFREPDNGRITFATIGTTAEIRQYRRLEDGSLNVV 168
P ++ R L Q D + + +E + A GTTAEI YR ++ + VV
Sbjct: 107 PQEVSMV-RNLIQKDRTFAVLAYSNVQERE------AQFGTTAEIYAYREEQEFGIEVV 158
Score = 47 (21.6 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 337 WRN-ELSQFRRTSRAFLPHWVYRMYDSYCLAQR 368
W+ + +F + P W+Y +YD+ L R
Sbjct: 227 WQKYQKRKFHCANLTSWPRWLYSLYDAETLMDR 259
>UNIPROTKB|Q640S2 [details] [associations]
symbol:crbn "Protein cereblon" species:8364 "Xenopus
(Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0031464 "Cul4A-RING ubiquitin
ligase complex" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003111 Pfam:PF02190 SMART:SM00464 UniPathway:UPA00143
GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0016567
InterPro:IPR015947 SUPFAM:SSF88697 GO:GO:0004176 CTD:51185
eggNOG:NOG313031 GeneTree:ENSGT00390000016404 HOGENOM:HOG000067866
HOVERGEN:HBG054571 KO:K11793 OrthoDB:EOG44XJGR GO:GO:0031464
EMBL:BC082517 RefSeq:NP_001008192.1 UniGene:Str.19548
ProteinModelPortal:Q640S2 STRING:Q640S2 Ensembl:ENSXETT00000011183
GeneID:493554 KEGG:xtr:493554 Xenbase:XB-GENE-973907
InParanoid:Q640S2 OMA:MAFIRIN Bgee:Q640S2 Uniprot:Q640S2
Length = 447
Score = 115 (45.5 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 39/119 (32%), Positives = 56/119 (47%)
Query: 51 NQLTFDTCLASLHTYLG-DVEDTHNRMAFLEGGAILTLPLFYLDGVVLFPEATLPLRVIK 109
N + FDT L + H YLG D+E+ H R + + +P+ V+L P TLPL + +
Sbjct: 46 NIINFDTSLPTSHAYLGVDMEEFHGRTLH-DDDSCQQIPVLPHVQVMLIPGQTLPLHLSR 104
Query: 110 PNFIAAAERALSQVDVPYTIGVVRVFREPDNGRITFATIGTTAEIRQYRRLEDGSLNVV 168
P ++ R L Q D T V+ +G A GTTAEI YR + + V
Sbjct: 105 PQEVSMV-RGLIQRD--RTFAVLAY----SDGLQREAHFGTTAEIYAYREEHEFGIETV 156
Score = 54 (24.1 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 327 SHRGEGSKMCWRNELSQ--FRRTSRAFLPHWVYRMYDSYCLAQR 368
S R SK W ++ + F S P W+Y +YD+ L +R
Sbjct: 216 SGRSPQSKCQWLHKYRRRKFLGASLTSWPSWLYALYDADSLMER 259
>UNIPROTKB|F1P3S5 [details] [associations]
symbol:CRBN "Protein cereblon" species:9031 "Gallus gallus"
[GO:0004176 "ATP-dependent peptidase activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0031464 "Cul4A-RING ubiquitin ligase complex"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] InterPro:IPR003111 Pfam:PF02190
SMART:SM00464 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161
InterPro:IPR015947 SUPFAM:SSF88697 GO:GO:0004176
GeneTree:ENSGT00390000016404 OMA:IRTQSDG GO:GO:0031464
IPI:IPI00585552 EMBL:AADN02014471 Ensembl:ENSGALT00000013466
Uniprot:F1P3S5
Length = 425
Score = 123 (48.4 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 38/119 (31%), Positives = 57/119 (47%)
Query: 51 NQLTFDTCLASLHTYLG-DVEDTHNRMAFLEGGAILTLPLFYLDGVVLFPEATLPLRVIK 109
N + FDT L + H YLG D+E+ H R + + +P+ V+L P TLPL++
Sbjct: 24 NMINFDTSLPTSHMYLGSDMEEFHGRTLH-DDDSCQVIPVLPHVMVMLIPGQTLPLQLFH 82
Query: 110 PNFIAAAERALSQVDVPYTIGVVRVFREPDNGRITFATIGTTAEIRQYRRLEDGSLNVV 168
P ++ R L Q D + + RE + A GTTAEI YR ++ + V
Sbjct: 83 PQEVSMV-RNLIQKDRTFAVLAYSNVRERE------AHFGTTAEIYAYREEQEYGIETV 134
Score = 43 (20.2 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 337 WRN-ELSQFRRTSRAFLPHWVYRMYDS 362
W+ + +F S P W+Y +YD+
Sbjct: 204 WQKYQKRKFHCASLTSWPPWLYSLYDA 230
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.136 0.404 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 380 319 0.00084 116 3 11 22 0.39 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 13
No. of states in DFA: 603 (64 KB)
Total size of DFA: 217 KB (2121 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 23.78u 0.14s 23.92t Elapsed: 00:00:01
Total cpu time: 23.78u 0.14s 23.92t Elapsed: 00:00:01
Start: Fri May 10 00:16:41 2013 End: Fri May 10 00:16:42 2013