BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016906
(380 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P0CF65|CRBN_CHICK Protein cereblon OS=Gallus gallus GN=CRBN PE=2 SV=1
Length = 445
Score = 65.9 bits (159), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 89/194 (45%), Gaps = 19/194 (9%)
Query: 40 DDRAATGADSSNQLTFDTCLASLHTYLG-DVEDTHNRMAFLEGGAILTLPLFYLDGVVLF 98
+D+ A+ N + FDT L + H YLG D+E+ H R + + +P+ V+L
Sbjct: 35 EDQDGKEAEKPNMINFDTSLPTSHMYLGSDMEEFHGR-TLHDDDSCQVIPVLPHVMVMLI 93
Query: 99 PEATLPLRVIKPNFIAAAERALSQVDVPYTIGVVRVFREPDNGRITFATIGTTAEIRQYR 158
P TLPL++ P ++ R L Q D + + RE + A GTTAEI YR
Sbjct: 94 PGQTLPLQLFHPQEVSMV-RNLIQKDRTFAVLAYSNVRERE------AHFGTTAEIYAYR 146
Query: 159 RLEDGSLNVV---TRGQQRFRLRRRWIDVEGVPCGEIQIIQEDLPLRTPRDVFETLGCVS 215
++ + V G+QRF++ +G+ ++QI+ E R + T+ V
Sbjct: 147 EEQEYGIETVKVKAIGRQRFKVLEIRTQSDGIQQAKVQILPE-------RVLPSTMSAVQ 199
Query: 216 NLSQSLSHTLPSNS 229
S S H PS+
Sbjct: 200 LQSLSRRHIFPSSK 213
>sp|Q96SW2|CRBN_HUMAN Protein cereblon OS=Homo sapiens GN=CRBN PE=1 SV=1
Length = 442
Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 76/155 (49%), Gaps = 12/155 (7%)
Query: 47 ADSSNQLTFDTCLASLHTYLG-DVEDTHNRMAFLEGGAILTLPLFYLDGVVLFPEATLPL 105
A N + FDT L + HTYLG D+E+ H R + + +P+ ++L P TLPL
Sbjct: 41 AKKPNIINFDTSLPTSHTYLGADMEEFHGR-TLHDDDSCQVIPVLPQVMMILIPGQTLPL 99
Query: 106 RVIKPNFIAAAERALSQVDVPYTIGVVRVFREPDNGRITFATIGTTAEIRQYRRLEDGSL 165
++ P ++ R L Q D + + +E + A GTTAEI YR +D +
Sbjct: 100 QLFHPQEVSMV-RNLIQKDRTFAVLAYSNVQERE------AQFGTTAEIYAYREEQDFGI 152
Query: 166 NVV---TRGQQRFRLRRRWIDVEGVPCGEIQIIQE 197
+V G+QRF++ +G+ ++QI+ E
Sbjct: 153 EIVKVKAIGRQRFKVLELRTQSDGIQQAKVQILPE 187
>sp|Q5R6Y2|CRBN_PONAB Protein cereblon OS=Pongo abelii GN=CRBN PE=2 SV=1
Length = 429
Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 76/155 (49%), Gaps = 12/155 (7%)
Query: 47 ADSSNQLTFDTCLASLHTYLG-DVEDTHNRMAFLEGGAILTLPLFYLDGVVLFPEATLPL 105
A N + FDT L + HTYLG D+E+ H R + + +P+ ++L P TLPL
Sbjct: 28 AKKPNIINFDTSLPTSHTYLGADMEEFHGR-TLHDDDSCQVIPVLPQVMMILIPGQTLPL 86
Query: 106 RVIKPNFIAAAERALSQVDVPYTIGVVRVFREPDNGRITFATIGTTAEIRQYRRLEDGSL 165
++ P ++ R L Q D + + +E + A GTTAEI YR +D +
Sbjct: 87 QLFHPQEVSMV-RNLIQKDRTFAVLAYSNIQERE------AQFGTTAEIYAYREEQDFGI 139
Query: 166 NVV---TRGQQRFRLRRRWIDVEGVPCGEIQIIQE 197
+V G+QRF++ +G+ ++QI+ E
Sbjct: 140 EIVKVKAIGRQRFKVLELRTQSDGIQQAKVQILPE 174
>sp|Q68EH9|CRBN_DANRE Protein cereblon OS=Danio rerio GN=crbn PE=1 SV=1
Length = 431
Score = 61.6 bits (148), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 90/190 (47%), Gaps = 15/190 (7%)
Query: 53 LTFDTCLASLHTYLG-DVEDTHNRMAFLEGGAILTLPLFYLDGVVLFPEATLPLRVIKPN 111
+ FDT L + H YLG D+E+ H R E ++ LP+ ++L P TLPL++ +P
Sbjct: 35 INFDTSLPTSHAYLGSDMEEFHGRTLHDE-DSVQNLPVLPHVALILIPGQTLPLQLFRPQ 93
Query: 112 FIAAAERALSQVDVPYTIGVVRVFREPD-NGRITFATIGTTAEIRQYRRLEDGSLNVV-- 168
++ +SQ D + + + PD +G T A GTTAEI +R ++ + V
Sbjct: 94 EVSMFRNLVSQ-DRTFAV----LAHSPDPSGTETKAEFGTTAEIYAFREEQEYGIETVKI 148
Query: 169 -TRGQQRFRLRRRWIDVEGVPCGEIQIIQEDLPLRTPRDVFETLGCVSNLSQSLSH---T 224
G+QRFR+ +G+ ++QI+ E + L P + L + S H T
Sbjct: 149 KAVGRQRFRVHDIRTQADGIRQAKVQILPERI-LPDPLCALQFLPRLHTHSPQTKHTQTT 207
Query: 225 LPSNSSSRGY 234
P S+ Y
Sbjct: 208 PPQKRCSQNY 217
>sp|Q0P564|CRBN_BOVIN Protein cereblon OS=Bos taurus GN=CRBN PE=2 SV=1
Length = 444
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 74/151 (49%), Gaps = 12/151 (7%)
Query: 51 NQLTFDTCLASLHTYLG-DVEDTHNRMAFLEGGAILTLPLFYLDGVVLFPEATLPLRVIK 109
N + FDT L + HTYLG D+E+ H R + + +P+ + L P TLPL++
Sbjct: 47 NIINFDTSLPTSHTYLGSDMEEFHGR-TLHDDDSCPVIPVLPQVVMTLIPGQTLPLQLFS 105
Query: 110 PNFIAAAERALSQVDVPYTIGVVRVFREPDNGRITFATIGTTAEIRQYRRLEDGSLNVV- 168
P ++ R L Q D + + +E + A GTTAEI YR +D + VV
Sbjct: 106 PQEVSMV-RNLIQKDRTFAVLAYSNVQERE------AQFGTTAEIYAYREEQDFGIEVVK 158
Query: 169 --TRGQQRFRLRRRWIDVEGVPCGEIQIIQE 197
G+QRF++ +G+ ++QI+ E
Sbjct: 159 VKAIGRQRFKVLEIRTQSDGIQQAKVQILPE 189
>sp|Q56AP7|CRBN_RAT Protein cereblon OS=Rattus norvegicus GN=Crbn PE=1 SV=1
Length = 445
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 76/155 (49%), Gaps = 12/155 (7%)
Query: 47 ADSSNQLTFDTCLASLHTYLG-DVEDTHNRMAFLEGGAILTLPLFYLDGVVLFPEATLPL 105
A N + FDT L + HTYLG D+E+ H R + + +P+ ++L P TLPL
Sbjct: 44 ARKPNIINFDTSLPTSHTYLGADMEEFHGR-TLHDDDSCQVIPVLPEVMMILIPGQTLPL 102
Query: 106 RVIKPNFIAAAERALSQVDVPYTIGVVRVFREPDNGRITFATIGTTAEIRQYRRLEDGSL 165
++ P ++ R L Q D + + +E + A GTTAEI YR ++ +
Sbjct: 103 QLSHPQEVSMV-RNLIQKDRTFAVLAYSNVQERE------AQFGTTAEIYAYREEQEFGI 155
Query: 166 NVV---TRGQQRFRLRRRWIDVEGVPCGEIQIIQE 197
VV G+QRF++ +G+ ++QI+ E
Sbjct: 156 EVVKVKAIGRQRFKVLELRTQSDGIQQAKVQILPE 190
>sp|Q8C7D2|CRBN_MOUSE Protein cereblon OS=Mus musculus GN=Crbn PE=2 SV=1
Length = 445
Score = 58.9 bits (141), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 76/155 (49%), Gaps = 12/155 (7%)
Query: 47 ADSSNQLTFDTCLASLHTYLG-DVEDTHNRMAFLEGGAILTLPLFYLDGVVLFPEATLPL 105
A N + FDT L + HTYLG D+E+ H R + + +P+ ++L P TLPL
Sbjct: 44 ARKPNIINFDTSLPTSHTYLGADMEEFHGR-TLHDDDSCQVIPVLPEVLMILIPGQTLPL 102
Query: 106 RVIKPNFIAAAERALSQVDVPYTIGVVRVFREPDNGRITFATIGTTAEIRQYRRLEDGSL 165
++ P ++ R L Q D + + +E + A GTTAEI YR ++ +
Sbjct: 103 QLSHPQEVSMV-RNLIQKDRTFAVLAYSNVQERE------AQFGTTAEIYAYREEQEFGI 155
Query: 166 NVV---TRGQQRFRLRRRWIDVEGVPCGEIQIIQE 197
VV G+QRF++ +G+ ++QI+ E
Sbjct: 156 EVVKVKAIGRQRFKVLELRTQSDGIQQAKVQILPE 190
>sp|Q640S2|CRBN_XENTR Protein cereblon OS=Xenopus tropicalis GN=crbn PE=2 SV=1
Length = 447
Score = 58.2 bits (139), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 74/161 (45%), Gaps = 12/161 (7%)
Query: 41 DRAATGADSSNQLTFDTCLASLHTYLG-DVEDTHNRMAFLEGGAILTLPLFYLDGVVLFP 99
D ++S N + FDT L + H YLG D+E+ H R + + +P+ V+L P
Sbjct: 36 DAKTADSESPNIINFDTSLPTSHAYLGVDMEEFHGR-TLHDDDSCQQIPVLPHVQVMLIP 94
Query: 100 EATLPLRVIKPNFIAAAERALSQVDVPYTIGVVRVFREPDNGRITFATIGTTAEIRQYRR 159
TLPL + +P ++ R L Q D + + +G A GTTAEI YR
Sbjct: 95 GQTLPLHLSRPQEVSMV-RGLIQRDRTFAVLAY------SDGLQREAHFGTTAEIYAYRE 147
Query: 160 LEDGSLNVV---TRGQQRFRLRRRWIDVEGVPCGEIQIIQE 197
+ + V G+QRF++ +G+ +QI+ E
Sbjct: 148 EHEFGIETVKVKAIGRQRFQVLETRTQADGIQVARVQILPE 188
>sp|Q6ML73|LON1_BDEBA Lon protease 1 OS=Bdellovibrio bacteriovorus (strain ATCC 15356 /
DSM 50701 / NCIB 9529 / HD100) GN=lon1 PE=3 SV=1
Length = 793
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 7/103 (6%)
Query: 76 MAFLEGGAILTLPLFYLDGVVLFPEATLPLRVIKPNFIAAAERALSQVDVPYTIGVVRVF 135
M+++ G +P+ L VLFP+ ++PLR+ + IAA ++AL D + I + +
Sbjct: 1 MSYVSG----YVPVIPLKNSVLFPDISMPLRIGREKSIAALQKALR--DNHWVILLTQKN 54
Query: 136 REPDNGRIT-FATIGTTAEIRQYRRLEDGSLNVVTRGQQRFRL 177
+I +GT A++ +R EDGS N+ + QR RL
Sbjct: 55 PNASVDKIEDLYQVGTLAKVESFRMEEDGSYNIFVKAHQRVRL 97
>sp|B8CY71|LON_HALOH Lon protease OS=Halothermothrix orenii (strain H 168 / OCM 544 /
DSM 9562) GN=lon PE=3 SV=1
Length = 783
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Query: 76 MAFLEGGAILTLPLFYLDGVVLFPEATLPLRVIKPNFIAAAERALSQVDVPYTIGVVRVF 135
M E + LPL GVV+FP +PL V + I A E+A+ + D I +
Sbjct: 5 MVTKETEKYIELPLLASRGVVVFPHMVIPLLVGREKSIEALEKAMVK-DKEIIILSQKDE 63
Query: 136 REPDNGRITFATIGTTAEIRQYRRLEDGSLNVVTRGQQRFRL 177
+ D TIGT AE++Q +L +G L VV G +R R+
Sbjct: 64 KIEDPDPEDLYTIGTIAEVKQLVKLPNGMLKVVVEGIKRARI 105
>sp|A9B3R2|LON2_HERA2 Lon protease 2 OS=Herpetosiphon aurantiacus (strain ATCC 23779 /
DSM 785) GN=lon2 PE=3 SV=1
Length = 815
Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Query: 79 LEGGAILTLPLFYLDGVVLFPEATLPLRVIKPNFIAAAERALSQVDVPYTIGVVRVFREP 138
+ L LP+ L VLFP PL V + +AA E A+S D R
Sbjct: 11 ISAATTLELPVLPLINTVLFPTMVTPLFVARELSMAAIEAAMS-ADRQIVAVAQRAIEIE 69
Query: 139 DNGRITFATIGTTAEIRQYRRLEDGSLNVVTRGQQRFRLRRRWIDVEGVPCGEIQIIQED 198
++ +G A I + +L DG+ +V+ +GQQR ++ W+ E ++QII+ D
Sbjct: 70 EHDTSQLYQVGVIAHIERVLKLPDGTTSVLVQGQQRVQI-VDWLATEPYINAQVQIIEPD 128
>sp|A6LD45|LON_PARD8 Lon protease OS=Parabacteroides distasonis (strain ATCC 8503 / DSM
20701 / NCTC 11152) GN=lon PE=3 SV=1
Length = 823
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 74/158 (46%), Gaps = 6/158 (3%)
Query: 86 TLPLFYLDGVVLFPEATLPLRVIKPNFIAAAERALSQVDVPYTIGVV--RVFREPDNGRI 143
T+P+ L +VLFP LP+ + +P + + A+ + + IGVV + D
Sbjct: 50 TIPILPLRNMVLFPGVALPVIIGRPKSMRLIKEAVHKKSL---IGVVCQKEMGTEDPILE 106
Query: 144 TFATIGTTAEIRQYRRLEDGSLNVVTRGQQRFRLRRRWIDVEGVPCGEIQIIQEDLPLRT 203
T G A+I + + DGS V+ +G++RF L + + G+I ++++ P +T
Sbjct: 107 DLYTTGVIADIVRVLEMPDGSTTVILQGKKRFEL-NELTETDPYLSGKITVLEDTKPDKT 165
Query: 204 PRDVFETLGCVSNLSQSLSHTLPSNSSSRGYGIRDNDS 241
R+ + + +L+ + + + I++N +
Sbjct: 166 DREFEALISTIKDLTIKMLGAVAEPPRDLIFSIKNNKN 203
>sp|Q3A334|LON2_PELCD Lon protease 2 OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd
1) GN=lon2 PE=3 SV=1
Length = 796
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 13/148 (8%)
Query: 87 LPLFYLDGVVLFPEATLPLRVIKPNFIAAAERALSQVDVPYTIGVVRVFREPDNGRITFA 146
LP++ L V+FP + PL + K + E AL + + V+ + +P GR FA
Sbjct: 13 LPVYPLHDQVIFPHMSFPLFIGK-EHMGLVEEALRNNRLLVVLTVLAI--DPITGREQFA 69
Query: 147 TIGTTAEIRQYRRLEDGSLNVVTRGQQRFRLRRRWIDVEGVPCGEIQIIQEDLPLRTPRD 206
+GT I Q R +G ++ G R RL + V + +I P R R+
Sbjct: 70 RVGTICRINQVLRFPEGGCKIILEGVNRVRL-ITTLQVTPFAMASVSLI----PERENRN 124
Query: 207 -----VFETLGCVSNLSQSLSHTLPSNS 229
+ +++ + ++QSL LP ++
Sbjct: 125 SVAQALMQSIIALLRVAQSLGQMLPEDA 152
>sp|Q5H432|LON_XANOR Lon protease OS=Xanthomonas oryzae pv. oryzae (strain KACC10331 /
KXO85) GN=lon PE=3 SV=1
Length = 850
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 84 ILTLPLFYLDGVVLFPEATLPLRVIKPNFIAAAERALSQVDVPYTIGVVRVFREPDNGRI 143
+L LP+ L VV+FP +PL V + + A E+A+ + D + + D +
Sbjct: 35 VLDLPVLPLRDVVVFPHMVIPLFVGRDKSMRALEKAM-EADKRILLVAQKSAETDDPAAV 93
Query: 144 TFATIGTTAEIRQYRRLEDGSLNVVTRGQQRF 175
T+GT A++ Q +L DG++ V+ G R
Sbjct: 94 DLHTVGTLAQVLQLLKLPDGTIKVLVEGLSRV 125
>sp|Q72CE6|LON_DESVH Lon protease OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB 8303) GN=lon PE=3 SV=1
Length = 821
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 87 LPLFYLDGVVLFPEATLPLRVIKPNFIAAAERALSQVDVPYTIGVVRVFREPD---NGRI 143
LPL L VV+FP + +PL V + I A E A+S D I +V REP+ G
Sbjct: 18 LPLMSLREVVMFPRSIVPLFVGREASIKAIESAIS--DYGKKIFLV-AQREPELEKPGPE 74
Query: 144 TFATIGTTAEIRQYRRLEDGSLNVVTRGQQRFR 176
+GT ++I Q RL DG++ V+ G R R
Sbjct: 75 DLFEVGTVSKILQLLRLPDGTIKVLFEGLYRAR 107
>sp|Q6MGP8|LON2_BDEBA Lon protease 2 OS=Bdellovibrio bacteriovorus (strain ATCC 15356 /
DSM 50701 / NCIB 9529 / HD100) GN=lon2 PE=3 SV=1
Length = 801
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 86 TLPLFYLDGVVLFPEATLPLRVIKPNFIAAAERALSQVDVPYTIGVVRVFRE---PDNGR 142
TLP+ + +V+FP +PL V + I + E AL++ + + + E PDN
Sbjct: 13 TLPMLPVRDIVVFPYMIIPLFVGRDASIRSVEEALAKNRLIFLASQKDITEENPSPDN-- 70
Query: 143 ITFATIGTTAEIRQYRRLEDGSLNVVTRGQQRFRLR 178
T+GT A I + R+L DG + ++ +G + R++
Sbjct: 71 --IYTVGTVAMIMRMRKLSDGRVKILIQGVAKGRVK 104
>sp|A5FG89|LON_FLAJ1 Lon protease OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM
2064 / UW101) GN=lon PE=3 SV=1
Length = 817
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 70/161 (43%), Gaps = 6/161 (3%)
Query: 85 LTLPLFYLDGVVLFPEATLPLRVIKPNFIAAAERALSQVDVPYTIGVVRVFREPDN--GR 142
++LP+ L VLFP +P+ + I A + + IGVV E D +
Sbjct: 42 VSLPILPLRNTVLFPGVVIPISAGRDKSIKLINDANAGGKI---IGVVSQINEEDEDPSK 98
Query: 143 ITFATIGTTAEIRQYRRLEDGSLNVVTRGQQRFRLRRRWIDVEGVPCGEIQIIQEDLPLR 202
IGT A I + ++ DG++ V+ +G++RF + + E I+ + E+ P
Sbjct: 99 DDIHKIGTVARILRVLKMPDGNVTVILQGKKRFEI-DEVVSEEPYMTASIKEVSEERPDE 157
Query: 203 TPRDVFETLGCVSNLSQSLSHTLPSNSSSRGYGIRDNDSDA 243
+ L V L+ + P+ S + I++ +S +
Sbjct: 158 NDSEFTAILDSVKELAIQIIKESPNIPSEATFAIKNIESQS 198
>sp|A0LEE9|LON1_SYNFM Lon protease 1 OS=Syntrophobacter fumaroxidans (strain DSM 10017 /
MPOB) GN=lon1 PE=3 SV=1
Length = 815
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Query: 81 GGAILTLPLFYLDGVVLFPEATLPLRVIKPNFIAAAERALSQVDVPYTIGVVRVFREPDN 140
G A +PL L +V+FP +PL V + + A ++A++ D + +
Sbjct: 13 GSATFAMPLLPLRDIVVFPSMVVPLFVGRDKSVNALDKAMA-TDKKIFLAAQTKAKTDTP 71
Query: 141 GRITFATIGTTAEIRQYRRLEDGSLNVVTRGQQRFRL 177
G +GT A I Q RL DG++ V+ G R R+
Sbjct: 72 GESDIYRVGTVANILQILRLPDGTVKVLVEGDFRARI 108
>sp|Q6AK61|LON2_DESPS Lon protease 2 OS=Desulfotalea psychrophila (strain LSv54 / DSM
12343) GN=lon2 PE=3 SV=1
Length = 774
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 8/118 (6%)
Query: 88 PLFYLDGVVLFPEATLPLRVIKPNFIAAAERAL-SQVDVPYTIGVVRVFREPDNGRITFA 146
PL L +V+FP PL V + I A E A+ + ++ + +P+ G I
Sbjct: 6 PLMPLRDIVIFPHMVAPLVVGREKSIRALEDAMEKKTEIFLVTQLEPTCEDPNEGEIY-- 63
Query: 147 TIGTTAEIRQYRRLEDGSLNVVTRGQQRFRLRRR-----WIDVEGVPCGEIQIIQEDL 199
GT + + Q RL DG++ + GQ+R R+ R ++ VE C E+ Q++L
Sbjct: 64 QCGTLSTVMQLLRLPDGTIKALVEGQRRARIVSRVPHEEFMQVEVEECTEVLPGQDEL 121
>sp|B4RI01|LON_PHEZH Lon protease OS=Phenylobacterium zucineum (strain HLK1) GN=lon PE=3
SV=1
Length = 792
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 97 LFPEATLPLRVIKPNFIAAAERALSQVDVPYTIGVVRVFREPDNGRITFATIGTTAEIRQ 156
+FP P+ + +P+ +AAA++AL + P + + + + PD G + +GT A + +
Sbjct: 27 IFPGVVFPIVLDRPSAVAAAQQALREQH-PLVLVLQQDVQAPDPGPQSLHRMGTLANVLR 85
Query: 157 YRRLEDGSLNVVTRGQQRFRLRRRWIDVEGVP 188
Y DG+ +V +G +RF + W VEG P
Sbjct: 86 YVTGPDGAPHVACQGVERFEI-DEW--VEGFP 114
>sp|P36774|LON2_MYXXA Lon protease 2 OS=Myxococcus xanthus GN=lon2 PE=1 SV=3
Length = 827
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Query: 86 TLPLFYLDGVVLFPEATLPLRVIKPNFIAAAERALSQVDVPYTIGVV--RVFREPDNGRI 143
LP+ L V FP LPL V + IA + A+ V IGVV R E D G
Sbjct: 32 VLPILPLRNSVFFPGGVLPLAVGRQKTIALIKDAVRDDQV---IGVVTQRRAEEEDPGAA 88
Query: 144 TFATIGTTAEIRQYRRLEDGSLNVVTRGQQRFRL 177
T+GT A I + ++ + + ++V +G RFR+
Sbjct: 89 DLYTMGTVARIVKLLKMGEDNYSLVVQGLARFRV 122
>sp|Q89A99|LON_BUCBP Lon protease OS=Buchnera aphidicola subsp. Baizongia pistaciae
(strain Bp) GN=lon PE=3 SV=1
Length = 780
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 14/135 (10%)
Query: 85 LTLPLFYLDGVVLFPEATLPLRVIKPNFIAAAERALSQVDVPYTIGVVRV-FREPDNGRI 143
+ +P+ L VV++P +PL V + I E ++++ + EP +
Sbjct: 9 IEIPVLPLRDVVIYPYMVIPLFVGRDKSIKCIEASMNKNKKIMLVTQKEAEIDEPTDN-- 66
Query: 144 TFATIGTTAEIRQYRRLEDGSLNVVTRGQQRFRLRRRWIDVE-GVPCGEIQII------- 195
TIGTTA I Q +L DG++ V+ G QR ++++ I+ E G +IQ+I
Sbjct: 67 DLFTIGTTASILQMLKLPDGTVKVLVEGLQRAKVKK--INNENGYFTAQIQLICTPEITE 124
Query: 196 -QEDLPLRTPRDVFE 209
++ + +RT + FE
Sbjct: 125 KEQSILIRTTLNQFE 139
>sp|Q32JJ5|LON_SHIDS Lon protease OS=Shigella dysenteriae serotype 1 (strain Sd197)
GN=lon PE=3 SV=1
Length = 812
Score = 41.6 bits (96), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Query: 85 LTLPLFYLDGVVLFPEATLPLRVIKPNFIAAAERALSQVDVPYTIGVVRVFREPDNGRIT 144
+ +P+ L VV++P +PL V + I E A+ D + + + G
Sbjct: 9 IEIPVLPLRDVVVYPHMVIPLFVGREKSIRCLEAAMDH-DKKIMLVAQKEASTDEPGVND 67
Query: 145 FATIGTTAEIRQYRRLEDGSLNVVTRGQQRFRL 177
T+GT A I Q +L DG++ V+ G QR R+
Sbjct: 68 LFTVGTVASILQMLKLPDGTVKVLVEGLQRARI 100
>sp|P0A9M0|LON_ECOLI Lon protease OS=Escherichia coli (strain K12) GN=lon PE=1 SV=1
Length = 784
Score = 41.6 bits (96), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Query: 85 LTLPLFYLDGVVLFPEATLPLRVIKPNFIAAAERALSQVDVPYTIGVVRVFREPDNGRIT 144
+ +P+ L VV++P +PL V + I E A+ D + + + G
Sbjct: 9 IEIPVLPLRDVVVYPHMVIPLFVGREKSIRCLEAAMDH-DKKIMLVAQKEASTDEPGVND 67
Query: 145 FATIGTTAEIRQYRRLEDGSLNVVTRGQQRFRL 177
T+GT A I Q +L DG++ V+ G QR R+
Sbjct: 68 LFTVGTVASILQMLKLPDGTVKVLVEGLQRARI 100
>sp|P0A9M1|LON_ECOL6 Lon protease OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928
/ UPEC) GN=lon PE=3 SV=1
Length = 784
Score = 41.6 bits (96), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Query: 85 LTLPLFYLDGVVLFPEATLPLRVIKPNFIAAAERALSQVDVPYTIGVVRVFREPDNGRIT 144
+ +P+ L VV++P +PL V + I E A+ D + + + G
Sbjct: 9 IEIPVLPLRDVVVYPHMVIPLFVGREKSIRCLEAAMDH-DKKIMLVAQKEASTDEPGVND 67
Query: 145 FATIGTTAEIRQYRRLEDGSLNVVTRGQQRFRL 177
T+GT A I Q +L DG++ V+ G QR R+
Sbjct: 68 LFTVGTVASILQMLKLPDGTVKVLVEGLQRARI 100
>sp|B0TZA7|LON_FRAP2 Lon protease OS=Francisella philomiragia subsp. philomiragia
(strain ATCC 25017) GN=lon PE=3 SV=1
Length = 774
Score = 41.2 bits (95), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Query: 86 TLPLFYLDGVVLFPEATLPLRVIKPNFIAAAERALSQVDVPYTIGVVRVFREPDNGRITF 145
+P+ L VV++P TLPL V + I A ++A + + + + +
Sbjct: 7 VVPVIPLRDVVIYPSMTLPLNVGRKKSIEAVKQASNSYNNYILLATQKNGSSSGDVVDNI 66
Query: 146 ATIGTTAEIRQYRRLEDGSLNVVTRGQQRFRLRRRWIDVEG 186
IGT A++ Q +L DGSL ++ G + RL ++ ++G
Sbjct: 67 YDIGTLAKVVQIMKLPDGSLKIIVEGIAK-RLVAKYESIDG 106
>sp|Q2IIK1|LON_ANADE Lon protease OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=lon
PE=3 SV=1
Length = 843
Score = 41.2 bits (95), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Query: 86 TLPLFYLDGVVLFPEATLPLRVIKPNFIAAAERALSQVDVPYTIGVV--RVFREPDNGRI 143
LP+ L V FP LPL V + IA + A+ V IGVV R E D G
Sbjct: 41 VLPILPLRNSVFFPGGVLPLAVGRQKTIALIKDAVRDEQV---IGVVTQRRAEEEDPGAA 97
Query: 144 TFATIGTTAEIRQYRRLEDGSLNVVTRGQQRFRL 177
T+GT A + + ++ + + ++V +G RF++
Sbjct: 98 DLYTVGTVARVVKLLKMGEDNYSLVVQGLARFKV 131
>sp|A0RJ87|LON_BACAH Lon protease OS=Bacillus thuringiensis (strain Al Hakam) GN=lon
PE=3 SV=1
Length = 794
Score = 41.2 bits (95), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 64/133 (48%), Gaps = 9/133 (6%)
Query: 74 NRMAFLEGGAILTL-------PLFYLDGVVLFPEATLPLRVIKPNFIAAAERALSQVDVP 126
NR GGA+ ++ PL L GV+++P L L V + I A E+A ++
Sbjct: 9 NRSLIYYGGAMSSMNTNERIVPLLPLRGVLVYPTMVLHLDVGRDKSIQALEQAAMDENII 68
Query: 127 YTIGVVRVFREPDNGRITFATIGTTAEIRQYRRLEDGSLNVVTRGQQRFRLRRRWIDVEG 186
+ + + + D ++GT A+++Q +L +G+L V+ G R + +I+ E
Sbjct: 69 F-LAMQKEMNIDDPKEDDIYSVGTVAKVKQMLKLPNGTLRVLVEGLHRAEV-VEFIEEEN 126
Query: 187 VPCGEIQIIQEDL 199
V I+ + E++
Sbjct: 127 VVQVSIKTVTEEV 139
>sp|B1GZQ6|LON_UNCTG Lon protease OS=Uncultured termite group 1 bacterium phylotype
Rs-D17 GN=lon PE=3 SV=1
Length = 802
Score = 41.2 bits (95), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 50/109 (45%), Gaps = 5/109 (4%)
Query: 86 TLPLFYLDGVVLFPEATLPLRVIKPNFIAAAERALSQVDVPYTIGVVRVFREPDNGRITF 145
LPL + ++L+P LPL V + I A E ++S + + + + E + +
Sbjct: 20 VLPLLPVRDIILYPAMVLPLAVGREKSIKALEESMSTNRLVFIVTQKNIQIEDPTPKDVY 79
Query: 146 ATIGTTAEIRQYRRLEDGSLNVVTRGQQRFRLRRRWIDVEGVPCGEIQI 194
IGT E+ Q ++ DG+L + G R +W D + G I++
Sbjct: 80 -NIGTICEVLQMLKMPDGTLKALVEGIS----RAQWTDFKLSDKGYIEV 123
>sp|B2RII6|LON_PORG3 Lon protease OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM
20709 / JCM 12257) GN=lon PE=3 SV=1
Length = 845
Score = 40.8 bits (94), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 59/134 (44%), Gaps = 20/134 (14%)
Query: 87 LPLFYLDGVVLFPEATLPLRVIKPN---FIAAAER------ALSQVDVPYTIGVVRVFRE 137
+P+ L ++LFP +P+ V + I E+ A+SQ D+ E
Sbjct: 45 MPILALRNMILFPGVAMPIMVGREKSLKLIRYVEKKGVYFGAVSQRDMD--------VEE 96
Query: 138 PDNGRITFATIGTTAEIRQYRRLEDGSLNVVTRGQQRFRLRRRWIDVEGVPCGEIQIIQE 197
PD R +G AEI + + DG+ + +G+QRF L + E G ++++ +
Sbjct: 97 PD--RADLYDVGVVAEIIRVLEMPDGTTTAIVQGRQRFAL-QEITATEPFMKGRVKLLPD 153
Query: 198 DLPLRTPRDVFETL 211
LP + FE L
Sbjct: 154 ILPGKNKDHEFEAL 167
>sp|A4J7L6|LON_DESRM Lon protease OS=Desulfotomaculum reducens (strain MI-1) GN=lon PE=3
SV=1
Length = 810
Score = 40.8 bits (94), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Query: 84 ILTLPLFYLDGVVLFPEATLPLRVIKPNFIAAAERALSQVDVPYTIGVVRVFREPDNGRI 143
I +LPL L G+++FP + L V + I A E A+ Q + + + RE
Sbjct: 5 IKSLPLLPLRGILVFPYMVIHLDVGREKSIQAIEEAMVQDRMIF----LATQREAQTDEP 60
Query: 144 T---FATIGTTAEIRQYRRLEDGSLNVVTRGQQRFRLRR 179
T IGT AE++Q +L G++ V+ G R ++ +
Sbjct: 61 TVDDIYNIGTVAEVKQLLKLPGGTIRVLVEGIARAKIEK 99
>sp|P57549|LON_BUCAI Lon protease OS=Buchnera aphidicola subsp. Acyrthosiphon pisum
(strain APS) GN=lon PE=3 SV=1
Length = 777
Score = 40.4 bits (93), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 85 LTLPLFYLDGVVLFPEATLPLRVIKPNFIAAAERALSQVDVPYTIGVVRVFREPDNGRIT 144
+T+P+ L VV++P +PL V + I E ++S I ++ +
Sbjct: 9 ITIPVLPLRDVVIYPHMVIPLFVGRQKSIKCIETSMSNDKKIMLIAQKEASKDEPTPKDL 68
Query: 145 FATIGTTAEIRQYRRLEDGSLNVVTRGQQRFRLR 178
F IGT + I Q +L DG++ V+ G QR ++
Sbjct: 69 F-DIGTISAILQMLKLPDGTVKVLIEGLQRAHIK 101
>sp|A8F811|LON_THELT Lon protease OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM
14385 / TMO) GN=lon PE=3 SV=1
Length = 781
Score = 40.4 bits (93), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 86 TLPLFYL-DGVVLFPEATLPLRVIKPNFIAAAERALSQVDVPYTIGVVRVFREPDNGRIT 144
TLPL +L +G+++FP+ +P+ V + + A E+++ V ++P +
Sbjct: 24 TLPLIHLRNGMIIFPQTVVPVHVAREKTLLALEQSIESYQ---QFVFVTSQKDPSVEEPS 80
Query: 145 F---ATIGTTAEIRQYRRLEDGSLNVVTRGQQRFR 176
F IGT +++ Q +L DGS V+ G +R R
Sbjct: 81 FDQLYEIGTVSKVLQVVQLPDGSFRVLLEGLERAR 115
>sp|B2KCC0|LON_ELUMP Lon protease OS=Elusimicrobium minutum (strain Pei191) GN=lon PE=3
SV=1
Length = 830
Score = 40.4 bits (93), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Query: 86 TLPLFYLDGVVLFPEATLPLRVIKPNFIAAAERALSQVDVPYTIGVVRVFREPDNGRIT- 144
LP + VV+FP +LPL V + IAA AL Y + V + E ++ +
Sbjct: 19 VLPAVAIRDVVMFPGMSLPLSVSRSKSIAAINLALDSNK--YVVAVAQKEAEVEDPKAED 76
Query: 145 FATIGTTAEIRQYRRLEDGSLNVVTRGQQRFRL 177
G +EI Q ++ DGS+ V +G R ++
Sbjct: 77 IYRFGVLSEITQSLKMPDGSIKVFLQGIARVKI 109
>sp|P37945|LON1_BACSU Lon protease 1 OS=Bacillus subtilis (strain 168) GN=lon1 PE=1 SV=1
Length = 774
Score = 40.0 bits (92), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 57/113 (50%), Gaps = 2/113 (1%)
Query: 86 TLPLFYLDGVVLFPEATLPLRVIKPNFIAAAERALSQVDVPYTIGVVRVFREPDNGRITF 145
++PL L G++++P L L V + + A E+A+ D + + + G
Sbjct: 8 SIPLLPLRGLLVYPTMVLHLDVGRDKSVQALEQAMMH-DHMIFLATQQDISIDEPGEDEI 66
Query: 146 ATIGTTAEIRQYRRLEDGSLNVVTRGQQRFRLRRRWIDVEGVPCGEIQIIQED 198
T+GT +I+Q +L +G++ V+ G +R + ++ + E +IQ+I ED
Sbjct: 67 FTVGTYTKIKQMLKLPNGTIRVLVEGLKRAHI-VKYNEHEDYTSVDIQLIHED 118
>sp|A7NM80|LON_ROSCS Lon protease OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8)
GN=lon PE=3 SV=1
Length = 802
Score = 40.0 bits (92), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 11/113 (9%)
Query: 86 TLPLFYLDGVVLFPEATLPLRVIKPNFIAAAERALSQVDVPYTIGVVRVFR--EPDNG-- 141
LP+ L+ VVLFP LPL V ++ + A +V VF +P G
Sbjct: 16 VLPILPLNNVVLFPGMFLPLVVSGDTWVKLVDEAA------LATKMVGVFMRTQPGEGFD 69
Query: 142 RITFATIGTTAEIRQYRRLEDGSLNVVTRGQQRFRLRRRWIDVEGVPCGEIQI 194
+ A G A I + RL G++ ++ +GQ R ++ R+ I E P + I
Sbjct: 70 PLALARTGAVALIVRMLRLPHGAVQILVQGQARIQI-RQLIVTEPYPQARVAI 121
>sp|A9GBF1|LON2_SORC5 Lon protease 2 OS=Sorangium cellulosum (strain So ce56) GN=lon2
PE=3 SV=1
Length = 804
Score = 40.0 bits (92), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 6/96 (6%)
Query: 86 TLPLFYLDGVVLFPEATLPLRVIKPNFIAAAERALSQVDVPYTIGVVRVFREPDNGRITF 145
++P+ L VLFP + +P+ V +P + E L + +GV+ R PD TF
Sbjct: 18 SVPILPLRNSVLFPMSVVPINVGRPRSVRLVEDLLGRERA--LVGVIS-QRSPDVDEPTF 74
Query: 146 A---TIGTTAEIRQYRRLEDGSLNVVTRGQQRFRLR 178
++GT A + + RL + +VV G RFR++
Sbjct: 75 KELYSVGTVARVVKVIRLGPNNYSVVLNGLGRFRVK 110
>sp|Q31GE9|LON1_THICR Lon protease 1 OS=Thiomicrospira crunogena (strain XCL-2) GN=lon1
PE=3 SV=1
Length = 815
Score = 39.3 bits (90), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 49/110 (44%), Gaps = 2/110 (1%)
Query: 89 LFYLDGVVLFPEATLPLRVIKPNFIAAAERALSQVDVPYTIGVVRVFREPDNGRITFATI 148
+ L VV+FP +PL V +P + A A+ + + + E + T
Sbjct: 14 VLALRDVVVFPGMVVPLFVGRPKSMNALNAAMKEDKQIFLVTQKNATEETPTIDNLYQT- 72
Query: 149 GTTAEIRQYRRLEDGSLNVVTRGQQRFRLRRRWIDVEGVPCGEIQIIQED 198
G A I Q +L DG+L V+ G +RF L D E G+IQ ++ D
Sbjct: 73 GVMANILQLLKLPDGTLKVLVEGVKRFEL-LALNDEENFLTGDIQQVESD 121
>sp|B0TFI9|LON_HELMI Lon protease OS=Heliobacterium modesticaldum (strain ATCC 51547 /
Ice1) GN=lon PE=3 SV=1
Length = 813
Score = 39.3 bits (90), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 2/102 (1%)
Query: 84 ILTLPLFYLDGVVLFPEATLPLRVIKPNFIAAAERALSQVDVPYTIGVVRVFREPDNGRI 143
I LPL L G+++FP + L V + + A E A++Q + + + + + G
Sbjct: 11 IQELPLLPLRGIIVFPYMVMHLDVGRERSVNAIEEAMAQDRIIF-LATQKEAQTDQPGAE 69
Query: 144 TFATIGTTAEIRQYRRLEDGSLNVVTRGQQRFRLRRRWIDVE 185
IG AEI+Q +L G++ V+ G R + +ID+E
Sbjct: 70 DIYQIGVIAEIKQLLKLPGGTIRVLVEGLARAEI-LEYIDME 110
>sp|B8G736|LON_CHLAD Lon protease OS=Chloroflexus aggregans (strain MD-66 / DSM 9485)
GN=lon PE=3 SV=1
Length = 824
Score = 39.3 bits (90), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 12/98 (12%)
Query: 87 LPLFYLDGVVLFPEATLPLRVIKPNFIAAAERALSQVDVPYTIGVVRVFR-------EPD 139
LP+ L +V+ P T+PL+V + A ERA + D + VR + +P
Sbjct: 26 LPMVVLGEMVIMPHMTIPLQVPQGKSYRAMERAWEE-DRDVLLIFVREHQLEGYKSNQPQ 84
Query: 140 NGRITFATIGTTAEIRQYRRLEDGSLNVVTRGQQRFRL 177
N IG A+++++ +L DG+ V+ GQ R ++
Sbjct: 85 N----LPPIGVIAQLQEFAKLNDGTARVILEGQSRAQI 118
>sp|P74956|LON_VIBPA Lon protease OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD
2210633) GN=lon PE=3 SV=2
Length = 783
Score = 39.3 bits (90), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 13/99 (13%)
Query: 85 LTLPLFYLDGVVLFPEATLPLRVIKPNFIAAAERAL---SQVDVPYTIGVVRVFREPDNG 141
+ +P+ L VV++P +PL V + I+ E A+ QV ++ ++ D
Sbjct: 9 IEIPVLPLRDVVVYPHMVIPLFVGREKSISCLETAMETNKQV-------LLVAQKQADTD 61
Query: 142 RIT---FATIGTTAEIRQYRRLEDGSLNVVTRGQQRFRL 177
T +GT A I Q +L DG++ V+ GQQR ++
Sbjct: 62 EPTVDDLFEVGTVATILQLLKLPDGTVKVLVEGQQRAKI 100
>sp|B4M686|CRBN_DROVI Protein cereblon homolog OS=Drosophila virilis GN=GJ10436 PE=3 SV=1
Length = 640
Score = 38.5 bits (88), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 113/284 (39%), Gaps = 25/284 (8%)
Query: 4 DRLLERERQQI---EQIRQLDFEELQVEEVDDFHDSSDDDDRAATGADSSNQLTFDTCLA 60
+ L+R R + ++IR +E + ++ D + + A D + FDT L
Sbjct: 193 ENFLQRVRSMVFSQDRIRGRASDEANADVINTVPDETPESPPAPLDVDMEEGVRFDTNLP 252
Query: 61 SLHTYLGDVEDTHNRMAFLEGGAILTLPLFYLDGVVLFPEATLPLRVIKPNFIAAAERAL 120
+ H+Y G + + +LE G+ + L ++ +LFP LP +I + I +
Sbjct: 253 AEHSYFGTNLNRVPGVDYLEVGSTHRM-LIFMHQHILFPGEVLPF-MIHGSIIDEEIQDS 310
Query: 121 SQVDVPYTIGVVRVFREPDNGRITFATIGTTAEIRQYRRLEDGSLNVVTRGQQRFRLRRR 180
+ V + +G + + PD+ G T +I Y + E G +V + + R+
Sbjct: 311 GRDGVIFGVG-FPLMQPPDDN--PHKLYGVTCQI--YEKGESGRQHVFYKSRALQRIVIN 365
Query: 181 WIDVEGVPCGEIQIIQEDLPLRTPRDVF--------ETLGCVSNLSQSLSHTLPSNSSS- 231
D++G P Q I + ++ V E L C+ S + +PS
Sbjct: 366 CDDIQGPP----QYIARNPTMKCYSKVKILPEYFLPEPLKCIDMGSLNRFRDIPSMEKKF 421
Query: 232 RGYGIRDN--DSDATSEESFESELSPTERRIHQSVIDFAYGCDI 273
R Y + +A E SFE + +++ ID C I
Sbjct: 422 RRYQLTSTPWPYEACEEYSFEHIVEKARQKLEIHKIDTMPKCPI 465
>sp|P43864|LON_HAEIN Lon protease OS=Haemophilus influenzae (strain ATCC 51907 / DSM
11121 / KW20 / Rd) GN=lon PE=3 SV=1
Length = 803
Score = 38.1 bits (87), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 7/95 (7%)
Query: 86 TLPLFYLDGVVLFPEATLPLRVIKPNFIAAAERALSQVDVPYTIGVVRVFREPDNGRIT- 144
T+P+ L VV+FP +PL V + I A E A++ D + V + RE D T
Sbjct: 8 TMPVLPLRDVVVFPYMVMPLFVGRAKSINALEEAMN--DDKQILLVSQ--READLEEPTP 63
Query: 145 --FATIGTTAEIRQYRRLEDGSLNVVTRGQQRFRL 177
+GT A I Q +L D ++ V+ GQ R ++
Sbjct: 64 EDLFDVGTIANIIQLLKLPDDTVKVLVEGQNRAKI 98
>sp|Q11QT1|LON_CYTH3 Lon protease OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
9469) GN=lon PE=3 SV=1
Length = 813
Score = 37.7 bits (86), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 17/106 (16%)
Query: 86 TLPLFYLDGVVLFPEATLPLRVIKPNFIAAAERALSQVDVPY----TIGVV----RVFRE 137
LP+ + +VLFP LP+ V ++++ V Y TIGVV + E
Sbjct: 29 VLPILPVRNIVLFPGVVLPITV-------GRQKSIRLVKKFYKGDRTIGVVAQENQKSEE 81
Query: 138 PDNGRITFATIGTTAEIRQYRRLEDGSLNVVTRGQQRFRLRRRWID 183
P I +GT A+I + L DG+ ++ +G++RF++ + D
Sbjct: 82 PSFQDIF--KVGTVAKILRMFVLPDGNTTIIIQGKRRFKIEEQVQD 125
>sp|B5Y8Q8|LON_COPPD Lon protease OS=Coprothermobacter proteolyticus (strain ATCC 35245
/ DSM 5265 / BT) GN=lon PE=3 SV=1
Length = 768
Score = 37.7 bits (86), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 9/94 (9%)
Query: 87 LPLFYLDGVVLFPEATLPLRVIKPNFIAAAERALSQVDVPYTIGVVRVFREPDN----GR 142
LP+ L VV+FP LPL + +P I A E A+ T V+ + ++ +N
Sbjct: 5 LPVIPLKNVVMFPGIVLPLLIGRPKSIKALEEAMKG-----TKQVILLAQKDENIDEPAP 59
Query: 143 ITFATIGTTAEIRQYRRLEDGSLNVVTRGQQRFR 176
+G E+ Q R DG++ +V + R +
Sbjct: 60 SDLYDVGVIGEVIQIFRAPDGTVRMVVEAKTRVK 93
>sp|P46067|LON_ERWAM Lon protease OS=Erwinia amylovora GN=lon PE=2 SV=1
Length = 784
Score = 37.7 bits (86), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
Query: 85 LTLPLFYLDGVVLFPEATLPLRVIKPNFIAAAERALSQVDVPYTIGVVRVFREPDNGRIT 144
+ +P+ L VV++P +PL V + I E A+ D + + + G
Sbjct: 9 IEIPVLPLRDVVVYPHMVIPLFVGREKSIRCLEAAMDH-DKKIMLVAQKEASTDEPGIND 67
Query: 145 FATIGTTAEIRQYRRLEDGSLNVVTRGQQRFRL 177
++GT A I Q +L D ++ V+ G QR R+
Sbjct: 68 LFSVGTVASILQMLKLPDATVKVLVEGLQRARI 100
>sp|O69177|LON_RHIME Lon protease OS=Rhizobium meliloti (strain 1021) GN=lon PE=3 SV=2
Length = 806
Score = 37.7 bits (86), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 7/97 (7%)
Query: 86 TLPLFYLDGVVLFPEATLPLRVIKPNFIAAAERAL---SQVDVPYTIGVVRVFREPDNGR 142
T P+ L +V+FP +PL V + I A E + Q+ + I EP
Sbjct: 13 TYPVLPLRDIVVFPHMIVPLFVGREKSIRALEEVMGTDKQIMLVTQINATDDDPEPS--- 69
Query: 143 ITFATIGTTAEIRQYRRLEDGSLNVVTRGQQRFRLRR 179
+GT A + Q +L DG++ V+ G+ R + R
Sbjct: 70 -AIYKVGTIANVLQLLKLPDGTVKVLVEGRSRAEIER 105
>sp|Q0AWF3|LON_SYNWW Lon protease OS=Syntrophomonas wolfei subsp. wolfei (strain
Goettingen) GN=lon PE=3 SV=1
Length = 812
Score = 37.0 bits (84), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 19/94 (20%)
Query: 87 LPLFYLDGVVLFPEATLPLRVIKPNFIAAAERALSQVDVPYTIGVVRVFR---------E 137
LP+ L GV++FP + L V + I A E A+ +G +F E
Sbjct: 12 LPMLPLRGVLVFPYTVIHLDVGRKKSINAIEDAM--------LGSKEIFLATQKEAQTDE 63
Query: 138 PDNGRITFATIGTTAEIRQYRRLEDGSLNVVTRG 171
PD I +GT AEIRQ ++ G++ V+ G
Sbjct: 64 PDEEDIY--EVGTVAEIRQILKMPGGTMRVLVEG 95
>sp|Q72JM6|LON2_THET2 Lon protease 2 OS=Thermus thermophilus (strain HB27 / ATCC BAA-163
/ DSM 7039) GN=lon2 PE=3 SV=1
Length = 804
Score = 37.0 bits (84), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 86 TLPLFYLDGVVLFPEATLPLRVIKPNFIAAAERALSQVDVPYTIGVVRVFREPDNGRIT- 144
T+P+ + G V++P +P+ +P I A + AL++ V + V + +E + R +
Sbjct: 5 TMPVCPVRGSVIYPTMVMPIDAGRPISIRAIDEALARDRV--LLIVSQRDKEVETPRPSD 62
Query: 145 FATIGTTAEIRQYRRLEDGSLNVVTRGQQRFRLRRRWIDV 184
+GT I + R+ DGS+ V+ + R R+ R W+D+
Sbjct: 63 LFEVGTACNILKMRKNPDGSVQVLVQAFARVRV-REWLDL 101
>sp|A9GIS9|LON3_SORC5 Lon protease 3 OS=Sorangium cellulosum (strain So ce56) GN=lon3
PE=3 SV=1
Length = 830
Score = 36.6 bits (83), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Query: 87 LPLFYLDGVVLFPEATLPLRVIKPNFIAAAERALSQVDVPYTIGVVRVFREPDNGRITFA 146
+PL L +++FP L V + IAA + A+++ + + R + D
Sbjct: 19 VPLLPLRDIIVFPHMVSQLFVGRERSIAALDEAMNRGKEIF-LAAQRNAKTNDPTPDDIF 77
Query: 147 TIGTTAEIRQYRRLEDGSLNVVTRGQQRFRLRR 179
+G+ I Q RL DG++ V+ G++R R+RR
Sbjct: 78 GVGSVGAIMQLLRLPDGTVKVLIEGKRRARIRR 110
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 136,861,341
Number of Sequences: 539616
Number of extensions: 5716673
Number of successful extensions: 22516
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 89
Number of HSP's that attempted gapping in prelim test: 20624
Number of HSP's gapped (non-prelim): 1777
length of query: 380
length of database: 191,569,459
effective HSP length: 119
effective length of query: 261
effective length of database: 127,355,155
effective search space: 33239695455
effective search space used: 33239695455
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)