Query 016908
Match_columns 380
No_of_seqs 305 out of 2027
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 05:47:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016908.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016908hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i3n_A Kelch-like protein 11; 100.0 1.8E-36 6E-41 285.8 14.7 198 1-209 69-272 (279)
2 3hve_A Gigaxonin; ubiquitin, c 100.0 2.8E-35 9.4E-40 274.2 3.1 184 3-199 69-255 (256)
3 2eqx_A Kelch repeat and BTB do 99.8 2.9E-21 9.8E-26 155.1 5.0 96 64-172 4-99 (105)
4 3htm_A Speckle-type POZ protei 99.7 2.6E-17 8.8E-22 143.2 9.2 104 1-113 68-171 (172)
5 3hqi_A Speckle-type POZ protei 99.6 1.1E-15 3.7E-20 145.7 8.6 104 1-113 208-311 (312)
6 4eoz_A Speckle-type POZ protei 99.4 2.7E-14 9.2E-19 120.4 2.3 85 2-94 60-144 (145)
7 2vkp_A BTB/POZ domain-containi 99.2 3.2E-11 1.1E-15 96.4 6.3 62 1-66 46-107 (109)
8 2if5_A Zinc finger and BTB dom 99.1 6.9E-11 2.3E-15 96.3 6.3 62 1-65 59-120 (120)
9 3m5b_A Zinc finger and BTB dom 99.1 7.5E-11 2.6E-15 96.2 5.9 59 5-66 59-117 (119)
10 1r29_A B-cell lymphoma 6 prote 99.1 1.9E-10 6.5E-15 94.7 6.9 61 2-66 64-125 (127)
11 2z8h_A Transcription regulator 99.1 1.3E-10 4.3E-15 97.3 5.7 64 7-73 74-137 (138)
12 2yy9_A Zinc finger and BTB dom 99.0 1.1E-10 3.6E-15 97.5 4.6 63 6-72 60-122 (135)
13 2vpk_A Myoneurin; transcriptio 99.0 2.2E-10 7.6E-15 92.7 6.3 60 6-66 57-116 (116)
14 1buo_A POZ domain, protein (pr 99.0 2.4E-10 8.2E-15 93.3 6.3 60 4-66 60-119 (121)
15 2ppi_A Gigaxonin; BTB domain, 99.0 1.7E-10 5.9E-15 97.3 5.3 60 3-65 85-144 (144)
16 3b84_A Zinc finger and BTB dom 99.0 2E-10 6.7E-15 93.6 4.7 58 6-66 59-116 (119)
17 2q81_A MIZ-1 protein; BTB/POZ 98.9 5.1E-10 1.8E-14 91.1 3.8 58 6-66 61-118 (119)
18 3ga1_A Nucleus accumbens-assoc 98.9 5.2E-10 1.8E-14 92.4 2.5 59 6-66 68-126 (129)
19 3ohu_A Transcription regulator 98.8 4.6E-10 1.6E-14 92.1 0.8 56 6-64 69-125 (125)
20 2ihc_A Transcription regulator 98.8 9.2E-10 3.1E-14 90.2 0.9 57 7-65 67-123 (124)
21 2ast_A S-phase kinase-associat 98.7 6.8E-09 2.3E-13 88.9 4.5 75 3-81 38-141 (159)
22 3fkc_A Transcriptional regulat 98.5 1.1E-07 3.9E-12 76.7 4.8 51 5-58 64-115 (116)
23 2p1m_A SKP1-like protein 1A; F 98.3 4.7E-07 1.6E-11 77.4 4.1 72 7-82 40-141 (160)
24 1fs1_B SKP1, cyclin A/CDK2-ass 98.2 7.6E-07 2.6E-11 74.5 3.8 70 6-79 36-131 (141)
25 4ajy_C Transcription elongatio 97.8 2.4E-05 8.2E-10 60.9 4.7 48 2-52 38-96 (97)
26 3ii7_A Kelch-like protein 7; p 97.8 0.00018 6.1E-09 66.8 11.6 52 225-280 7-65 (306)
27 2zwa_A Leucine carboxyl methyl 97.8 4.3E-06 1.5E-10 87.7 0.5 120 147-280 315-461 (695)
28 2vpj_A Kelch-like protein 12; 97.6 0.00037 1.3E-08 64.4 11.6 58 216-279 3-71 (301)
29 2xn4_A Kelch-like protein 2; s 97.6 0.00035 1.2E-08 64.7 10.4 56 218-279 4-70 (302)
30 2xn4_A Kelch-like protein 2; s 97.5 0.00038 1.3E-08 64.4 10.1 47 229-279 109-164 (302)
31 3ii7_A Kelch-like protein 7; p 97.5 0.00035 1.2E-08 64.8 9.6 48 229-280 56-111 (306)
32 4asc_A Kelch repeat and BTB do 97.5 0.00027 9.1E-09 66.0 8.2 48 229-280 149-206 (315)
33 2vpj_A Kelch-like protein 12; 97.4 0.0014 4.7E-08 60.5 11.7 48 229-280 113-169 (301)
34 2woz_A Kelch repeat and BTB do 97.3 0.00079 2.7E-08 62.9 9.7 47 229-279 110-167 (318)
35 1zgk_A Kelch-like ECH-associat 97.3 0.0012 4E-08 61.4 10.7 48 229-280 122-178 (308)
36 4asc_A Kelch repeat and BTB do 97.3 0.00091 3.1E-08 62.4 9.9 39 237-279 116-157 (315)
37 1zgk_A Kelch-like ECH-associat 97.3 0.0013 4.3E-08 61.2 10.8 39 237-279 89-130 (308)
38 2woz_A Kelch repeat and BTB do 97.3 0.00059 2E-08 63.7 8.2 47 229-279 159-215 (318)
39 3ivv_A Speckle-type POZ protei 97.2 0.00037 1.3E-08 58.0 5.2 114 265-380 27-144 (145)
40 2uvk_A YJHT; unknown function, 97.1 0.00092 3.1E-08 63.4 7.7 47 229-279 20-74 (357)
41 3v7d_A Suppressor of kinetocho 97.1 0.00072 2.5E-08 58.0 5.9 57 7-66 50-131 (169)
42 3drz_A BTB/POZ domain-containi 97.1 0.0012 4.1E-08 52.2 6.7 57 7-66 50-106 (107)
43 2zwa_A Leucine carboxyl methyl 96.9 0.0012 4E-08 69.2 7.0 49 228-280 451-510 (695)
44 2uvk_A YJHT; unknown function, 96.7 0.0044 1.5E-07 58.6 9.0 39 237-279 167-209 (357)
45 3hqi_A Speckle-type POZ protei 96.5 0.0024 8.3E-08 59.9 5.5 113 265-379 23-139 (312)
46 1k3i_A Galactose oxidase precu 96.0 0.0044 1.5E-07 64.1 4.8 47 229-279 254-306 (656)
47 2foj_A Ubiquitin carboxyl-term 95.9 0.015 5E-07 48.7 6.5 111 267-379 33-148 (155)
48 2fnj_C Transcription elongatio 95.8 0.0065 2.2E-07 46.9 3.7 48 3-53 38-96 (96)
49 3drx_A BTB/POZ domain-containi 95.4 0.016 5.4E-07 50.8 4.9 57 7-66 56-112 (202)
50 1k3i_A Galactose oxidase precu 95.3 0.012 4.2E-07 60.7 4.6 39 237-279 487-530 (656)
51 1hv2_A Elongin C, ELC1; protei 95.3 0.015 5E-07 45.1 3.9 48 3-53 38-99 (99)
52 1s1g_A Potassium voltage-gated 95.2 0.015 5.2E-07 47.0 4.0 54 6-62 52-106 (124)
53 2nz0_B Potassium voltage-gated 94.3 0.022 7.5E-07 47.0 2.8 52 6-60 74-126 (140)
54 1nn7_A Potassium channel KV4.2 94.3 0.018 6.1E-07 45.2 2.0 53 6-61 39-92 (105)
55 1vcb_B Protein (elongin C); tu 94.0 0.032 1.1E-06 44.2 3.0 45 6-53 57-112 (112)
56 2f1z_A Ubiquitin carboxyl-term 93.3 0.1 3.5E-06 52.4 6.1 110 268-379 46-160 (522)
57 1t1d_A Protein (potassium chan 92.7 0.13 4.6E-06 39.7 4.7 49 6-57 41-90 (100)
58 3kvt_A Potassium channel prote 92.1 0.06 2.1E-06 42.8 2.0 49 6-57 45-93 (115)
59 1ca9_A TRAF2, protein (TNF rec 91.9 0.055 1.9E-06 46.9 1.8 108 268-380 66-191 (192)
60 4gjh_A TNF receptor-associated 91.9 0.055 1.9E-06 46.4 1.7 108 268-379 47-173 (178)
61 1lb6_A TNF receptor-associated 89.7 1.1 3.9E-05 37.1 7.9 111 268-380 28-157 (160)
62 1d00_A Tumor necrosis factor r 88.7 0.16 5.6E-06 42.7 2.0 108 269-379 43-166 (168)
63 1flk_A TNF receptor associated 87.4 1.4 4.6E-05 39.2 7.2 108 268-379 99-223 (228)
64 4ghu_A TNF receptor-associated 83.7 1.9 6.5E-05 37.3 6.2 109 267-379 62-187 (198)
65 2gkw_A TNF receptor-associated 81.7 2.3 7.9E-05 36.5 5.9 108 268-379 63-187 (192)
66 3i3n_A Kelch-like protein 11; 75.7 13 0.00045 33.4 9.4 94 34-132 138-250 (279)
67 2eqx_A Kelch repeat and BTB do 74.7 3.2 0.00011 31.8 4.2 37 31-69 4-40 (105)
68 3htm_A Speckle-type POZ protei 64.8 5.6 0.00019 32.8 3.9 33 35-69 132-164 (172)
69 2vkp_A BTB/POZ domain-containi 62.5 4.6 0.00016 30.6 2.8 33 68-104 76-108 (109)
70 2r9r_B Paddle chimera voltage 54.7 14 0.00048 36.8 5.4 49 6-57 92-141 (514)
71 1pd7_B MAD1; PAH2, SIN3, eukar 50.1 6.6 0.00023 22.0 1.2 14 39-52 3-16 (26)
72 1r29_A B-cell lymphoma 6 prote 47.9 13 0.00044 28.9 3.2 33 68-104 94-126 (127)
73 2z8h_A Transcription regulator 46.4 7.3 0.00025 31.1 1.5 35 68-106 100-134 (138)
74 2yy9_A Zinc finger and BTB dom 44.9 7.9 0.00027 30.8 1.5 38 68-109 86-123 (135)
75 2vpk_A Myoneurin; transcriptio 38.6 19 0.00065 27.4 2.8 31 68-102 85-115 (116)
76 2q81_A MIZ-1 protein; BTB/POZ 37.9 21 0.00072 27.4 2.9 31 68-102 87-117 (119)
77 3b84_A Zinc finger and BTB dom 36.9 14 0.00047 28.5 1.7 33 68-104 85-117 (119)
78 1buo_A POZ domain, protein (pr 33.9 30 0.001 26.5 3.3 32 68-103 88-119 (121)
79 2if5_A Zinc finger and BTB dom 31.0 37 0.0013 25.8 3.4 30 68-101 90-119 (120)
80 2ast_A S-phase kinase-associat 27.0 1.6E+02 0.0054 23.8 6.8 47 68-128 93-139 (159)
81 3hve_A Gigaxonin; ubiquitin, c 27.0 39 0.0013 29.7 3.2 31 35-66 131-161 (256)
82 2ppi_A Gigaxonin; BTB domain, 22.6 31 0.001 27.6 1.4 30 68-101 114-143 (144)
83 2lky_A Uncharacterized protein 20.7 95 0.0032 24.0 3.7 44 139-185 8-51 (112)
No 1
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=100.00 E-value=1.8e-36 Score=285.83 Aligned_cols=198 Identities=21% Similarity=0.390 Sum_probs=181.2
Q ss_pred CCCCCcceEEEec----CCCCHHHHHHHhHhHhcCceecCCcchHHHHHHHHHHhchHhHHHHHHHHhhcCCCChHhHHH
Q 016908 1 MKESEQRHVALRI----NASEEAALMELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTPESALL 76 (380)
Q Consensus 1 m~Es~~~~V~L~~----~~v~~~~f~~lL~fiYtg~i~i~~~~~v~~ll~aA~~lqi~~l~~~C~~fL~~~~l~~~Ncl~ 76 (380)
|+|+.+++|+|+. +++++++|+.+|+|||||++.++. +++.+++.+|++||++.|++.|++||.+ .++++||+.
T Consensus 69 ~~e~~~~~i~l~~~~~~~~v~~~~f~~ll~~~Ytg~~~i~~-~~v~~ll~~A~~l~i~~L~~~c~~~L~~-~l~~~n~~~ 146 (279)
T 3i3n_A 69 FSESRSGRVEMRKWSSEPGPEPDTVEAVIEYMYTGRIRVST-GSVHEVLELADRFLLIRLKEFCGEFLKK-KLHLSNCVA 146 (279)
T ss_dssp -------EEECCCCSSTTCSCHHHHHHHHHHHHHSEEEEET-TTHHHHHHHHHHTTCHHHHHHHHHHHHH-HCCTTTHHH
T ss_pred CccccCCeEEeccccccCCCCHHHHHHHHHhhCcCCcccCH-HHHHHHHHHHHHHCcHHHHHHHHHHHHH-cCCcchHHH
Confidence 5688888888862 278999999999999999999997 9999999999999999999999999999 899999999
Q ss_pred HHHhccccccccchHHHHHHHHHHHhcccccccccchhhcccCHHHHHhhccCCCcCCCChHHHHHHHHHHHHhhCCChH
Q 016908 77 YLELPSSVLMGEAVQPLTDAARQYLASRYKDMTKFQDEVMALPLAGVEAILSSDDLQIASEDAVYDFVLKWARAQYPRVE 156 (380)
Q Consensus 77 i~~~a~~~~~~~~~~~L~~~a~~fi~~~f~~v~~~~~efl~L~~~~l~~lL~sd~L~v~~E~~v~~~v~~Wi~~d~~~~~ 156 (380)
++.+|+. +++.+|.+.|.+||.+||.++.+ +++|++||.+.+..+|++|+|+|.+|.+||+++++|++|| ++
T Consensus 147 i~~~A~~----~~~~~L~~~~~~~i~~~f~~v~~-~~~f~~L~~~~l~~lL~~d~L~v~sE~~vf~av~~W~~~~---~~ 218 (279)
T 3i3n_A 147 IHSLAHM----YTLSQLALKAADMIRRNFHKVIQ-DEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQRN---AE 218 (279)
T ss_dssp HHHHHHH----TTCHHHHHHHHHHHHHTHHHHTT-SSGGGGSCHHHHHHHHTCSSCCCSCHHHHHHHHHHHHHTT---HH
T ss_pred HHHHHHH----cCcHHHHHHHHHHHHHHHHHHhc-CcChhcCCHHHHHHHhcCcCCCCCCHHHHHHHHHHHHHcC---HH
Confidence 9999984 69999999999999999999999 9999999999999999999999999999999999999999 89
Q ss_pred HHHHHHHHHhcccccCCCCCHHHHHhhhccCCCC--hhHHHHHHHHHHHhhhcCC
Q 016908 157 ERREVLGSRLARFIRFPHMTCRKLKKVLTCNDFD--HDVASKLVLEALFFKAEAP 209 (380)
Q Consensus 157 ~R~~~l~~~Ll~~VRf~~l~~~~L~~~~~~~~l~--~~~c~~~i~ea~~~~~~~~ 209 (380)
+|.+++ ++||++||||+|++++|.+.+.+++++ ++.|++++.+|++||..|.
T Consensus 219 ~r~~~~-~~ll~~VRf~l~~~~~L~~~v~~~~l~~~~~~c~~~l~ea~~~~~~~~ 272 (279)
T 3i3n_A 219 ERERYF-EELFKLLRLSQMKPTYLTRHVKPERLVANNEVCVKLVADAVERHALRA 272 (279)
T ss_dssp HHTTTH-HHHHTTSCGGGSCHHHHHHTTTTSHHHHTCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHH-HHHHHhcCCCCCCHHHHHHHhhccchhcCCHHHHHHHHHHHHhccCch
Confidence 999999 999999999999999999999988886 3789999999999999764
No 2
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=100.00 E-value=2.8e-35 Score=274.22 Aligned_cols=184 Identities=16% Similarity=0.344 Sum_probs=156.5
Q ss_pred CCCcceEEEecCCCCHHHHHHHhHhHhcCceecCCcchHHHHHHHHHHhchHhHHHHHHHHhhcCCCChHhHHHHHHhcc
Q 016908 3 ESEQRHVALRINASEEAALMELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTPESALLYLELPS 82 (380)
Q Consensus 3 Es~~~~V~L~~~~v~~~~f~~lL~fiYtg~i~i~~~~~v~~ll~aA~~lqi~~l~~~C~~fL~~~~l~~~Ncl~i~~~a~ 82 (380)
|+.+.+|+|+ ++++++|+.+|+|+|||++.++. +++.+++.+|++||++.+++.|++||.+ .++++||+.++.+|+
T Consensus 69 e~~~~~i~l~--~v~~~~f~~ll~~~Yt~~~~i~~-~~v~~ll~~A~~l~i~~l~~~c~~~L~~-~l~~~n~~~i~~~A~ 144 (256)
T 3hve_A 69 DGSTYKIELE--GISVMVMREILDYIFSGQIRLNE-DTIQDVVQAADLLLLTDLKTLCCEFLEG-CIAAENCIGIRDFAL 144 (256)
T ss_dssp ----CEEECS--SCCHHHHHHHHHHHHHSCCCCC--CCHHHHHHHHHHHTCHHHHHHHHHHHHH-TCCSSTTHHHHHHHH
T ss_pred cCCCCeEEeC--CCCHHHHHHHHhhccCCCCcccH-hHHHHHHHHHHHHChHHHHHHHHHHHHh-hCCHhhHHHHHHHHH
Confidence 5677788887 99999999999999999999997 9999999999999999999999999999 899999999999998
Q ss_pred ccccccchHHHHHHHHHHHhcccccccccchhhcccCHHHHHhhccCCCcCCCChHHHHHHHHHHHHhhCCChHHHHHHH
Q 016908 83 SVLMGEAVQPLTDAARQYLASRYKDMTKFQDEVMALPLAGVEAILSSDDLQIASEDAVYDFVLKWARAQYPRVEERREVL 162 (380)
Q Consensus 83 ~~~~~~~~~~L~~~a~~fi~~~f~~v~~~~~efl~L~~~~l~~lL~sd~L~v~~E~~v~~~v~~Wi~~d~~~~~~R~~~l 162 (380)
. +++.+|.+.|.+||.+||.++.+ +++|++||.+.+..+|++|+|+|.+|.+||+++++|++|| +++|.+++
T Consensus 145 ~----~~~~~L~~~~~~~i~~~f~~v~~-~~~f~~L~~~~l~~lL~~d~L~v~~E~~v~~av~~W~~~~---~~~R~~~~ 216 (256)
T 3hve_A 145 H----YCLHHVHYLATEYLETHFRDVSS-TEEFLELSPQKLKEVISLEKLNVGNERYVFEAVIRWIAHD---TEIRKVHM 216 (256)
T ss_dssp H----TTCHHHHHHHHHHHHHHHHHHTT-CHHHHSSCHHHHHHHHHCC-------CTTHHHHTTTCCC-----CCSTTTH
T ss_pred H----cCcHHHHHHHHHHHHHHHHHHhC-CcchhcCCHHHHHHHHccCCCCCCCHHHHHHHHHHHHHcC---HHHHHHHH
Confidence 4 69999999999999999999999 9999999999999999999999999999999999999999 78899999
Q ss_pred HHHhcccccCCCCCHHHHHhhhccCCCCh---hHHHHHHH
Q 016908 163 GSRLARFIRFPHMTCRKLKKVLTCNDFDH---DVASKLVL 199 (380)
Q Consensus 163 ~~~Ll~~VRf~~l~~~~L~~~~~~~~l~~---~~c~~~i~ 199 (380)
++||++||||+|++++|.+.++++|++. +.|++++.
T Consensus 217 -~~ll~~VRf~~l~~~~l~~~v~~~~l~~~~~~~c~~ll~ 255 (256)
T 3hve_A 217 -KDVMSALWVSGLDSSYLREQMLNEPLVREIVKECSNIPL 255 (256)
T ss_dssp -HHHHHHHHHHTTCC-CHHHHHHTSTTHHHHHCC------
T ss_pred -HHHHHhCCCCCCCHHHHHHHHhcChHHHhhHHHHHHHhh
Confidence 9999999999999999999999999984 25887764
No 3
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.83 E-value=2.9e-21 Score=155.09 Aligned_cols=96 Identities=16% Similarity=0.213 Sum_probs=90.9
Q ss_pred hhcCCCChHhHHHHHHhccccccccchHHHHHHHHHHHhcccccccccchhhcccCHHHHHhhccCCCcCCCChHHHHHH
Q 016908 64 LRNMPMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASRYKDMTKFQDEVMALPLAGVEAILSSDDLQIASEDAVYDF 143 (380)
Q Consensus 64 L~~~~l~~~Ncl~i~~~a~~~~~~~~~~~L~~~a~~fi~~~f~~v~~~~~efl~L~~~~l~~lL~sd~L~v~~E~~v~~~ 143 (380)
+.+ +|+++||++++.+|+. +++.+|.++|.+||.+||.++.+ +++|++||.+.|..+|++| |.+|.+||++
T Consensus 4 ~~~-~L~~~NCl~i~~~A~~----~~~~~L~~~a~~fi~~nF~~v~~-~~eFl~L~~~~L~~lL~sd---v~~E~~vf~a 74 (105)
T 2eqx_A 4 GSS-GVQVGNCLQVMWLADR----HSDPELYTAAKHCAKTHLAQLQN-TEEFLHLPHRLLTDIISDG---VPCSQNPTEA 74 (105)
T ss_dssp CCC-CCCTTTHHHHHHHHHH----TTCHHHHHHHHHHHHHTCHHHHT-SHHHHHSCHHHHHHHHHTC---EETTSCHHHH
T ss_pred hhc-cCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHHHHHHh-cccHhhCCHHHHHHHHcCC---CCCHHHHHHH
Confidence 356 7999999999999994 69999999999999999999999 9999999999999999997 7899999999
Q ss_pred HHHHHHhhCCChHHHHHHHHHHhcccccC
Q 016908 144 VLKWARAQYPRVEERREVLGSRLARFIRF 172 (380)
Q Consensus 144 v~~Wi~~d~~~~~~R~~~l~~~Ll~~VRf 172 (380)
+++|++|| +++|.+++ ++||++||+
T Consensus 75 v~~Wv~~d---~~~R~~~~-~~Ll~~VR~ 99 (105)
T 2eqx_A 75 IEAWINFN---KEEREAFA-ESLRTSLKE 99 (105)
T ss_dssp HHHHHHTT---HHHHHHHH-HHHHHHCCE
T ss_pred HHHHHHcC---HHHHHHHH-HHHHHHHHH
Confidence 99999999 89999999 999999995
No 4
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.70 E-value=2.6e-17 Score=143.16 Aligned_cols=104 Identities=22% Similarity=0.339 Sum_probs=92.6
Q ss_pred CCCCCcceEEEecCCCCHHHHHHHhHhHhcCceecCCcchHHHHHHHHHHhchHhHHHHHHHHhhcCCCChHhHHHHHHh
Q 016908 1 MKESEQRHVALRINASEEAALMELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTPESALLYLEL 80 (380)
Q Consensus 1 m~Es~~~~V~L~~~~v~~~~f~~lL~fiYtg~i~i~~~~~v~~ll~aA~~lqi~~l~~~C~~fL~~~~l~~~Ncl~i~~~ 80 (380)
|+|+.+.+|.|+ ++++++|+.+|+|+|||++.++. +++.+++.+|++|+++.|++.|.+||.+ .++++||+.++.+
T Consensus 68 ~~e~~~~~i~l~--~~~~~~f~~~l~~~Yt~~~~~~~-~~~~~ll~~A~~~~~~~l~~~c~~~l~~-~l~~~n~~~~~~~ 143 (172)
T 3htm_A 68 MEESKKNRVEIN--DVEPEVFKEMMCFIYTGKAPNLD-KMADDLLAAADKYALERLKVMCEDALCS-NLSVENAAEILIL 143 (172)
T ss_dssp CCGGGTTEEEEC--SSCHHHHHHHHHHHHHSCCTTGG-GTHHHHHHHHHHTTCHHHHHHHHHHHHH-TCCTTTHHHHHHH
T ss_pred ccccCCCeEEec--CCCHHHHHHHHHHHhCCCCCCcH-HHHHHHHHHHHHhCcHHHHHHHHHHHHH-hCCHHHHHHHHHH
Confidence 467888899998 99999999999999999999986 9999999999999999999999999999 8999999999999
Q ss_pred ccccccccchHHHHHHHHHHHhcccccccccch
Q 016908 81 PSSVLMGEAVQPLTDAARQYLASRYKDMTKFQD 113 (380)
Q Consensus 81 a~~~~~~~~~~~L~~~a~~fi~~~f~~v~~~~~ 113 (380)
|.. +++.+|.+.|.+||.+||.++.+ ++
T Consensus 144 A~~----~~~~~L~~~~~~~i~~~~~~v~~-s~ 171 (172)
T 3htm_A 144 ADL----HSADQLKTQAVDFINYHATDVLE-TS 171 (172)
T ss_dssp HHH----TTCHHHHHHHHHHHHHTC--------
T ss_pred HHH----hCcHHHHHHHHHHHHHHHHHHHc-CC
Confidence 994 69999999999999999999987 54
No 5
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.60 E-value=1.1e-15 Score=145.67 Aligned_cols=104 Identities=22% Similarity=0.339 Sum_probs=89.8
Q ss_pred CCCCCcceEEEecCCCCHHHHHHHhHhHhcCceecCCcchHHHHHHHHHHhchHhHHHHHHHHhhcCCCChHhHHHHHHh
Q 016908 1 MKESEQRHVALRINASEEAALMELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTPESALLYLEL 80 (380)
Q Consensus 1 m~Es~~~~V~L~~~~v~~~~f~~lL~fiYtg~i~i~~~~~v~~ll~aA~~lqi~~l~~~C~~fL~~~~l~~~Ncl~i~~~ 80 (380)
|+|+.+.+|+|+ ++++++|+.+|+|||||++.++. +++++||.+|++|+++.|++.|++||.+ .++++||+.++.+
T Consensus 208 ~~e~~~~~i~l~--~~~~~~f~~~L~~iYt~~~~~~~-~~~~~ll~~A~~~~~~~l~~~c~~~l~~-~~~~~n~~~~l~~ 283 (312)
T 3hqi_A 208 MEESKKNRVEIN--DVEPEVFKEMMCFIYTGKAPNLD-KMADDLLAAADKYALERLKVMCEDALCS-NLSVENAAEILIL 283 (312)
T ss_dssp ----CCSEEEEC--SSCHHHHHHHHHHHHHSCCTTHH-HHHHHHHHHHHHTTCHHHHHHHHHHHHT-TCCTTTHHHHHHH
T ss_pred ccccCCceEEec--CCCHHHHHHHHHhhcCCCCCChH-HHHHHHHHHHHHhCHHHHHHHHHHHHHc-cCCHHHHHHHHHH
Confidence 578888999998 99999999999999999999986 9999999999999999999999999999 8999999999999
Q ss_pred ccccccccchHHHHHHHHHHHhcccccccccch
Q 016908 81 PSSVLMGEAVQPLTDAARQYLASRYKDMTKFQD 113 (380)
Q Consensus 81 a~~~~~~~~~~~L~~~a~~fi~~~f~~v~~~~~ 113 (380)
|+. +++.+|.+.|.+||..||.++.+ ++
T Consensus 284 A~~----~~~~~L~~~~~~~i~~~~~~v~~-s~ 311 (312)
T 3hqi_A 284 ADL----HSADQLKTQAVDFINYHATDVLE-TS 311 (312)
T ss_dssp HHH----TTCHHHHHHHHHHHHHTC--------
T ss_pred HHH----hCCHHHHHHHHHHHHHHHHHHhh-CC
Confidence 984 69999999999999999999987 54
No 6
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.43 E-value=2.7e-14 Score=120.40 Aligned_cols=85 Identities=24% Similarity=0.351 Sum_probs=55.0
Q ss_pred CCCCcceEEEecCCCCHHHHHHHhHhHhcCceecCCcchHHHHHHHHHHhchHhHHHHHHHHhhcCCCChHhHHHHHHhc
Q 016908 2 KESEQRHVALRINASEEAALMELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTPESALLYLELP 81 (380)
Q Consensus 2 ~Es~~~~V~L~~~~v~~~~f~~lL~fiYtg~i~i~~~~~v~~ll~aA~~lqi~~l~~~C~~fL~~~~l~~~Ncl~i~~~a 81 (380)
+|+.+.+|.|+ ++++++|+.+|+|+|||++.++. +++.+++.+|++|+++.+++.|++||.+ .++++||+.++.+|
T Consensus 60 ~e~~~~~i~l~--~~~~~~~~~~l~~~Y~~~~~~~~-~~~~~ll~~A~~~~~~~l~~~c~~~l~~-~l~~~n~~~~l~~A 135 (145)
T 4eoz_A 60 EESKKNRVEIN--DVEPEVFKEMMCFIYTGKAPNLD-KMADDLLAAADKYALERLKVMCEDALCS-NLSVENAAEILILA 135 (145)
T ss_dssp HHHHHTEEEEC--SSCHHHHHHHHHHHHHSCCTTGG-GTHHHHHHHHHHTTCHHHHHHHHCC------------------
T ss_pred cCCCCceEEec--CCCHHHHHHHHHhhccCccCCcH-HHHHHHHHHHHHhCHHHHHHHHHHHHHH-hCCHHHHHHHHHHH
Confidence 45566788888 99999999999999999999987 9999999999999999999999999999 89999999999999
Q ss_pred cccccccchHHHH
Q 016908 82 SSVLMGEAVQPLT 94 (380)
Q Consensus 82 ~~~~~~~~~~~L~ 94 (380)
+. |++.+|+
T Consensus 136 ~~----~~~~~Lk 144 (145)
T 4eoz_A 136 DL----HSADQLK 144 (145)
T ss_dssp -------------
T ss_pred HH----hCHHHhc
Confidence 85 5777765
No 7
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.16 E-value=3.2e-11 Score=96.45 Aligned_cols=62 Identities=29% Similarity=0.510 Sum_probs=55.6
Q ss_pred CCCCCcceEEEecCCCCHHHHHHHhHhHhcCceecCCcchHHHHHHHHHHhchHhHHHHHHHHhhc
Q 016908 1 MKESEQRHVALRINASEEAALMELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRN 66 (380)
Q Consensus 1 m~Es~~~~V~L~~~~v~~~~f~~lL~fiYtg~i~i~~~~~v~~ll~aA~~lqi~~l~~~C~~fL~~ 66 (380)
|+|+. .+|.|+ ++++++|+.+|+|+|||++.++. +++.+++.+|++|+++.|++.|.+||.+
T Consensus 46 ~~e~~-~~i~l~--~~~~~~f~~~l~~iYt~~~~~~~-~~~~~ll~~A~~~~~~~L~~~c~~~l~~ 107 (109)
T 2vkp_A 46 LAEVK-SEIHIP--DVEPAAFLILLKYMYSDEIDLEA-DTVLATLYAAKKYIVPALAKACVNFLET 107 (109)
T ss_dssp ----C-CEEEET--TSCHHHHHHHHHHHHHCCCCCCT-TTHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cccCC-CeEEeC--CCCHHHHHHHHHHHcCCCccCCH-HHHHHHHHHHHHhCcHHHHHHHHHHHHh
Confidence 45666 788887 99999999999999999999997 9999999999999999999999999987
No 8
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.12 E-value=6.9e-11 Score=96.30 Aligned_cols=62 Identities=26% Similarity=0.409 Sum_probs=55.4
Q ss_pred CCCCCcceEEEecCCCCHHHHHHHhHhHhcCceecCCcchHHHHHHHHHHhchHhHHHHHHHHhh
Q 016908 1 MKESEQRHVALRINASEEAALMELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLR 65 (380)
Q Consensus 1 m~Es~~~~V~L~~~~v~~~~f~~lL~fiYtg~i~i~~~~~v~~ll~aA~~lqi~~l~~~C~~fL~ 65 (380)
|+|+.+.+|+|+ ++++++|+.+|+|||||++.++. +++.+++.+|++|+++.|++.|++||.
T Consensus 59 ~~e~~~~~i~l~--~~~~~~f~~ll~~~Yt~~~~~~~-~~~~~ll~~A~~~~i~~L~~~C~~~L~ 120 (120)
T 2if5_A 59 AVVDQQNVYEID--FVSAEALTALMDFAYTATLTVST-ANVGDILSAARLLEIPAVSHVCADLLD 120 (120)
T ss_dssp ----CCSEEECC--SSCHHHHHHHHHHHHHSCCCCCG-GGHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred ccccCCceEEeC--CCCHHHHHHHHHHHcCCCCccCH-HHHHHHHHHHHHhCCHHHHHHHHHHhC
Confidence 467788889988 99999999999999999999997 999999999999999999999999984
No 9
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.10 E-value=7.5e-11 Score=96.25 Aligned_cols=59 Identities=20% Similarity=0.250 Sum_probs=53.5
Q ss_pred CcceEEEecCCCCHHHHHHHhHhHhcCceecCCcchHHHHHHHHHHhchHhHHHHHHHHhhc
Q 016908 5 EQRHVALRINASEEAALMELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRN 66 (380)
Q Consensus 5 ~~~~V~L~~~~v~~~~f~~lL~fiYtg~i~i~~~~~v~~ll~aA~~lqi~~l~~~C~~fL~~ 66 (380)
.+++|+|+ ++++++|+.+|+|||||++.++. +|+++++.+|++||++.|++.|++++++
T Consensus 59 ~~~~i~l~--~v~~~~f~~ll~fiYtg~~~i~~-~~v~~ll~aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 59 RGQWALGE--GISPSTFAQLLNFVYGESVELQP-GELRPLQEAARALGVQSLEEACWRARGD 117 (119)
T ss_dssp CEEEECCS--SCCHHHHHHHHHHHTTCCEEECG-GGHHHHHHHHHHTTCHHHHHHHHHHC--
T ss_pred CCCEEEeC--CCCHHHHHHHHHHHcCCCcCcCH-HHHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 45677777 99999999999999999999997 9999999999999999999999999876
No 10
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.07 E-value=1.9e-10 Score=94.66 Aligned_cols=61 Identities=18% Similarity=0.385 Sum_probs=56.8
Q ss_pred CCCCcceEEE-ecCCCCHHHHHHHhHhHhcCceecCCcchHHHHHHHHHHhchHhHHHHHHHHhhc
Q 016908 2 KESEQRHVAL-RINASEEAALMELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRN 66 (380)
Q Consensus 2 ~Es~~~~V~L-~~~~v~~~~f~~lL~fiYtg~i~i~~~~~v~~ll~aA~~lqi~~l~~~C~~fL~~ 66 (380)
+| .+.+|+| + ++++++|+.+|+|||||++.++. +++.+++.+|++|+++.|++.|++||.+
T Consensus 64 ~e-~~~~i~l~~--~~~~~~f~~ll~~~Ytg~~~~~~-~~~~~ll~~A~~~~i~~L~~~c~~~l~~ 125 (127)
T 1r29_A 64 KR-NLSVINLDP--EINPEGFNILLDFMYTSRLNLRE-GNIMAVMATAMYLQMEHVVDTCRKFIKA 125 (127)
T ss_dssp TT-TCSEEECCT--TSCHHHHHHHHHHHHHSCCCCCT-TTHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred cC-CCCEEEeCC--CCCHHHHHHHHHHHcCCCcCcCH-HHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 45 5678888 6 99999999999999999999997 9999999999999999999999999987
No 11
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.06 E-value=1.3e-10 Score=97.30 Aligned_cols=64 Identities=16% Similarity=0.232 Sum_probs=58.8
Q ss_pred ceEEEecCCCCHHHHHHHhHhHhcCceecCCcchHHHHHHHHHHhchHhHHHHHHHHhhcCCCChHh
Q 016908 7 RHVALRINASEEAALMELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTPES 73 (380)
Q Consensus 7 ~~V~L~~~~v~~~~f~~lL~fiYtg~i~i~~~~~v~~ll~aA~~lqi~~l~~~C~~fL~~~~l~~~N 73 (380)
.+|+|+ .++++++|+.+|+|||||++.++. +++.+++.+|++||++.|++.|++||.+ +++.+|
T Consensus 74 ~~i~l~-~~v~~~~~~~lL~~~Ytg~~~i~~-~~v~~ll~~A~~~~i~~L~~~C~~~l~~-~l~~sn 137 (138)
T 2z8h_A 74 LTVTLP-EEVTVKGFEPLIQFAYTAKLILSK-DNVDEVCRCVEFLSVHNIEESCFQFLKF-KFLDST 137 (138)
T ss_dssp EEEECC-TTSCHHHHHHHHHHHHHSCCCCCT-TTHHHHHHHHHHHTCGGGHHHHHHHTTC-CCSCCC
T ss_pred ceEEeC-CCCCHHHHHHHHHHhcCCCcccCH-HHHHHHHHHHHHhCCHHHHHHHHHHHHH-hccccc
Confidence 456662 289999999999999999999997 9999999999999999999999999999 899877
No 12
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.05 E-value=1.1e-10 Score=97.46 Aligned_cols=63 Identities=24% Similarity=0.333 Sum_probs=54.0
Q ss_pred cceEEEecCCCCHHHHHHHhHhHhcCceecCCcchHHHHHHHHHHhchHhHHHHHHHHhhcCCCChH
Q 016908 6 QRHVALRINASEEAALMELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTPE 72 (380)
Q Consensus 6 ~~~V~L~~~~v~~~~f~~lL~fiYtg~i~i~~~~~v~~ll~aA~~lqi~~l~~~C~~fL~~~~l~~~ 72 (380)
+.+|+|+ ++++++|+.+|+|||||++.++. +++.+++.+|++||++.|++.|++||.+ ++...
T Consensus 60 ~~~i~l~--~~~~~~f~~lL~fiYtg~~~i~~-~~v~~ll~~A~~l~i~~L~~~C~~~l~~-~l~~~ 122 (135)
T 2yy9_A 60 GGSVVLP--AGFAEIFGLLLDFFYTGHLALTS-GNRDQVLLAAKELRVPEAVELCQSFQPQ-TSVGQ 122 (135)
T ss_dssp -CCEEEC--GGGHHHHHHHHHHHHHSCCCCCT-TTHHHHHHHHHHTTCHHHHHHHHHCCC-------
T ss_pred CCeEEeC--CCCHHHHHHHHHHHhCCCCCCCH-HHHHHHHHHHHHhCcHHHHHHHHHHHHH-hccCC
Confidence 4678888 99999999999999999999997 9999999999999999999999999999 67543
No 13
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.04 E-value=2.2e-10 Score=92.71 Aligned_cols=60 Identities=22% Similarity=0.379 Sum_probs=55.0
Q ss_pred cceEEEecCCCCHHHHHHHhHhHhcCceecCCcchHHHHHHHHHHhchHhHHHHHHHHhhc
Q 016908 6 QRHVALRINASEEAALMELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRN 66 (380)
Q Consensus 6 ~~~V~L~~~~v~~~~f~~lL~fiYtg~i~i~~~~~v~~ll~aA~~lqi~~l~~~C~~fL~~ 66 (380)
+++|+|+++++++++|+.+|+|||||++.++. +++.+++.+|++||++.|++.|++||.+
T Consensus 57 ~~~i~l~~~~~~~~~f~~ll~~~Yt~~~~~~~-~~v~~ll~~A~~~~i~~L~~~C~~~l~~ 116 (116)
T 2vpk_A 57 ENNVFLDQSQVKADGFQKLLEFIYTGTLNLDS-WNVKEIHQAADYLKVEEVVTKCKIKMED 116 (116)
T ss_dssp CSCEECCTTTCCHHHHHHHHHHHHHSCCCCCT-TTHHHHHHHHHHTTCHHHHHHHHHHHC-
T ss_pred CCeEEeecCCCCHHHHHHHHHHHcCCCcccCH-HHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 56777776689999999999999999999987 9999999999999999999999999964
No 14
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.04 E-value=2.4e-10 Score=93.30 Aligned_cols=60 Identities=25% Similarity=0.431 Sum_probs=56.3
Q ss_pred CCcceEEEecCCCCHHHHHHHhHhHhcCceecCCcchHHHHHHHHHHhchHhHHHHHHHHhhc
Q 016908 4 SEQRHVALRINASEEAALMELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRN 66 (380)
Q Consensus 4 s~~~~V~L~~~~v~~~~f~~lL~fiYtg~i~i~~~~~v~~ll~aA~~lqi~~l~~~C~~fL~~ 66 (380)
+.+++|+|+ ++++++|+.+|+|+|||++.++. +++.+++.+|++|+++.|++.|++||.+
T Consensus 60 ~~~~~i~l~--~~~~~~f~~ll~~~Ytg~~~~~~-~~~~~ll~~A~~~~i~~L~~~c~~~l~~ 119 (121)
T 1buo_A 60 RNSQHYTLD--FLSPKTFQQILEYAYTATLQAKA-EDLDDLLYAAEILEIEYLEEQCLKMLET 119 (121)
T ss_dssp SCCSEEEEC--SSCHHHHHHHHHHHHHSCCCCCG-GGHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CCCcEEEeC--CCCHHHHHHHHHhhcCCCcCCCH-HHHHHHHHHHHHHCCHHHHHHHHHHHHH
Confidence 446788888 99999999999999999999987 9999999999999999999999999987
No 15
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.03 E-value=1.7e-10 Score=97.28 Aligned_cols=60 Identities=18% Similarity=0.399 Sum_probs=54.1
Q ss_pred CCCcceEEEecCCCCHHHHHHHhHhHhcCceecCCcchHHHHHHHHHHhchHhHHHHHHHHhh
Q 016908 3 ESEQRHVALRINASEEAALMELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLR 65 (380)
Q Consensus 3 Es~~~~V~L~~~~v~~~~f~~lL~fiYtg~i~i~~~~~v~~ll~aA~~lqi~~l~~~C~~fL~ 65 (380)
|+.+.+|.|+ ++++++|+.+|+|||||++.++. +++.+++.+|++|+++.|++.|++||+
T Consensus 85 e~~~~~I~l~--~v~~~~f~~lL~fiYtg~~~i~~-~~v~~ll~~A~~l~i~~L~~~C~~~L~ 144 (144)
T 2ppi_A 85 DGSTYKIELE--GISVMVMREILDYIFSGQIRLNE-DTIQDVVQAADLLLLTDLKTLCCEFLE 144 (144)
T ss_dssp --CCCEEECC--SSCHHHHHHHHHHHTTSCCCCCT-TTHHHHHHHHHHTTCHHHHHHHHTTC-
T ss_pred cCCCcEEEeC--CCCHHHHHHHHHHHhCCCCCCCH-HHHHHHHHHHHHhCcHHHHHHHHHHhC
Confidence 3567778887 99999999999999999999997 999999999999999999999999874
No 16
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.01 E-value=2e-10 Score=93.60 Aligned_cols=58 Identities=26% Similarity=0.361 Sum_probs=53.7
Q ss_pred cceEEEecCCCCHHHHHHHhHhHhcCceecCCcchHHHHHHHHHHhchHhHHHHHHHHhhc
Q 016908 6 QRHVALRINASEEAALMELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRN 66 (380)
Q Consensus 6 ~~~V~L~~~~v~~~~f~~lL~fiYtg~i~i~~~~~v~~ll~aA~~lqi~~l~~~C~~fL~~ 66 (380)
+.+|+|+ ++++++|+.+|+|||||++.++. +++.+++.+|++|+++.|++.|++||.+
T Consensus 59 ~~~i~l~--~~~~~~f~~ll~~iYtg~~~~~~-~~v~~ll~~A~~~~i~~L~~~C~~~l~~ 116 (119)
T 3b84_A 59 GGSVVLP--AGFAEIFGLLLDFFYTGHLALTS-GNRDQVLLAARELRVPEAVELCQSFKPK 116 (119)
T ss_dssp CCCEEEC--GGGHHHHHHHHHHHHHSCCCCCT-TTHHHHHHHHHHTTCHHHHHHHHHCC--
T ss_pred CCeEEeC--CCCHHHHHHHHHHHcCCCCccCH-HHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 5678888 99999999999999999999997 9999999999999999999999999987
No 17
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=98.92 E-value=5.1e-10 Score=91.08 Aligned_cols=58 Identities=29% Similarity=0.394 Sum_probs=53.1
Q ss_pred cceEEEecCCCCHHHHHHHhHhHhcCceecCCcchHHHHHHHHHHhchHhHHHHHHHHhhc
Q 016908 6 QRHVALRINASEEAALMELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRN 66 (380)
Q Consensus 6 ~~~V~L~~~~v~~~~f~~lL~fiYtg~i~i~~~~~v~~ll~aA~~lqi~~l~~~C~~fL~~ 66 (380)
+++|.|+ ++++++|+.+|+|||||++.++. +|+.+++.+|++||++.|++.|++||.-
T Consensus 61 ~~~i~l~--~~~~~~f~~ll~~~Ytg~~~i~~-~~~~~ll~~A~~l~i~~L~~~C~~~l~l 118 (119)
T 2q81_A 61 KDVVHLD--ISNAAGLGQVLEFMYTAKLSLSP-ENVDDVLAVATFLQMQDIITACHALKSL 118 (119)
T ss_dssp CSGGGGG--GCCHHHHHHHHHHHHHSCCCCCT-TTHHHHHHHHHHTTCHHHHHHHHHHHTC
T ss_pred CCEEEeC--CCCHHHHHHHHHHHcCCCCccCH-HHHHHHHHHHHHhCCHHHHHHHHHHHhc
Confidence 3456666 89999999999999999999997 9999999999999999999999999863
No 18
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=98.88 E-value=5.2e-10 Score=92.36 Aligned_cols=59 Identities=17% Similarity=0.245 Sum_probs=47.5
Q ss_pred cceEEEecCCCCHHHHHHHhHhHhcCceecCCcchHHHHHHHHHHhchHhHHHHHHHHhhc
Q 016908 6 QRHVALRINASEEAALMELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRN 66 (380)
Q Consensus 6 ~~~V~L~~~~v~~~~f~~lL~fiYtg~i~i~~~~~v~~ll~aA~~lqi~~l~~~C~~fL~~ 66 (380)
+.+|+|+ .++++++|+.+|+|||||++.++. +++.+++.+|++||++.|++.|++||.+
T Consensus 68 ~~~i~l~-~~~~~~~f~~ll~~iYtg~~~i~~-~~~~~ll~~A~~~~i~~l~~~C~~~L~~ 126 (129)
T 3ga1_A 68 SAVVELP-AAVQPQSFQQILSFCYTGRLSMNV-GDQDLLMYTAGFLQIQEIMEKGTEFFLK 126 (129)
T ss_dssp CSEEECC-TTCCHHHHHHHHHHHHHSEEECCT-TTHHHHHHHHHHTTBTTSSCC-------
T ss_pred CCEEEEC-CCCCHHHHHHHHHHHhCCccccCH-HHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 4566662 289999999999999999999997 9999999999999999999999999987
No 19
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=98.84 E-value=4.6e-10 Score=92.06 Aligned_cols=56 Identities=20% Similarity=0.293 Sum_probs=51.6
Q ss_pred cceEEEecCC-CCHHHHHHHhHhHhcCceecCCcchHHHHHHHHHHhchHhHHHHHHHHh
Q 016908 6 QRHVALRINA-SEEAALMELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLL 64 (380)
Q Consensus 6 ~~~V~L~~~~-v~~~~f~~lL~fiYtg~i~i~~~~~v~~ll~aA~~lqi~~l~~~C~~fL 64 (380)
+.+|.|+ + +++++|+.+|+|||||++.++. +++.+++.+|++|+++.|++.|++||
T Consensus 69 ~~~i~l~--~~~~~~~f~~~l~~iYtg~~~~~~-~~v~~ll~~A~~l~i~~L~~~C~~~L 125 (125)
T 3ohu_A 69 DLVVSLP--EEVTARGFGPLLQFAYTAKLLLSR-ENIREVIRCAEFLRMHNLEDSCFSFL 125 (125)
T ss_dssp SCEEECC--TTCCHHHHHHHHHHHTTSEEEECT-TTHHHHHHHHHHHTBSSCTTSSCCCC
T ss_pred CcEEEeC--CCCCHHHHHHHHHhHcCCceEECH-HHHHHHHHHHHHhCCHHHHHHHHHhC
Confidence 4567776 7 9999999999999999999997 99999999999999999999998875
No 20
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=98.78 E-value=9.2e-10 Score=90.24 Aligned_cols=57 Identities=16% Similarity=0.285 Sum_probs=51.3
Q ss_pred ceEEEecCCCCHHHHHHHhHhHhcCceecCCcchHHHHHHHHHHhchHhHHHHHHHHhh
Q 016908 7 RHVALRINASEEAALMELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLR 65 (380)
Q Consensus 7 ~~V~L~~~~v~~~~f~~lL~fiYtg~i~i~~~~~v~~ll~aA~~lqi~~l~~~C~~fL~ 65 (380)
.+|+|+ .++++++|+.+|+|||||++.++. +|+.+++.+|++||++.|++.|++||+
T Consensus 67 ~~i~l~-~~v~~~~f~~lL~~iYtg~~~i~~-~~v~~ll~~A~~~~~~~L~~~C~~~l~ 123 (124)
T 2ihc_A 67 LNITLP-EEVTVKGFEPLIQFAYTAKLILSK-ENVDEVCKCVEFLSVHNIEESCFQFLK 123 (124)
T ss_dssp EEEECC-TTSCHHHHHHHHHHHHHSEEEEET-TTHHHHHHHHHHHTBSSCCGGGGGTC-
T ss_pred ceEeec-CCcCHHHHHHHHHHhcCCCcccCH-HHHHHHHHHHHHHCCHHHHHHHHHHHh
Confidence 456662 289999999999999999999997 999999999999999999999999885
No 21
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=98.72 E-value=6.8e-09 Score=88.92 Aligned_cols=75 Identities=17% Similarity=0.334 Sum_probs=59.1
Q ss_pred CCCcceEEEecCCCCHHHHHHHhHhHhcCc--------------------------eecCCcchHHHHHHHHHHhchHhH
Q 016908 3 ESEQRHVALRINASEEAALMELLNFMYSNT--------------------------LSTTAAPALLDVLMAADKFEVASC 56 (380)
Q Consensus 3 Es~~~~V~L~~~~v~~~~f~~lL~fiYtg~--------------------------i~i~~~~~v~~ll~aA~~lqi~~l 56 (380)
|+.++.|.|+ +|++.+|+.+++|+|++. +.++. +++.+|+.||++|+|..|
T Consensus 38 e~~~~~Ipl~--~V~~~iL~kViey~~~h~~~~~~~~~~~~~~~~~~~i~~wD~~F~~id~-~~l~eLl~AAnyL~I~~L 114 (159)
T 2ast_A 38 EGDDDPVPLP--NVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQ-GTLFELILAANYLDIKGL 114 (159)
T ss_dssp -----CEECT--TSCHHHHHHHHHHHHHTTTCCC-----------CCCCCHHHHHHTCSCH-HHHHHHHHHHHHHTCHHH
T ss_pred cccCCCcCCC--CccHHHHHHHHHHHHHcCcCCCCcccccccccchhhhhHHHHHHHcCCH-HHHHHHHHHHHHHhHHHH
Confidence 4555678777 999999999999999998 78876 999999999999999999
Q ss_pred HHHHHHHhhcCCC---ChHhHHHHHHhc
Q 016908 57 MRYCSRLLRNMPM---TPESALLYLELP 81 (380)
Q Consensus 57 ~~~C~~fL~~~~l---~~~Ncl~i~~~a 81 (380)
+++||+|+.+ .| +++.+-.++.+.
T Consensus 115 ld~~c~~va~-~i~gkt~eeir~~f~I~ 141 (159)
T 2ast_A 115 LDVTCKTVAN-MIKGKTPEEIRKTFNIK 141 (159)
T ss_dssp HHHHHHHHHH-HHSSCCHHHHHHHTTCC
T ss_pred HHHHHHHHHH-HHcCCCHHHHHHHcCCC
Confidence 9999999977 45 455444444443
No 22
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=98.47 E-value=1.1e-07 Score=76.72 Aligned_cols=51 Identities=18% Similarity=0.277 Sum_probs=46.6
Q ss_pred CcceEEEecCCCCHHHHHHHhHhHhcCce-ecCCcchHHHHHHHHHHhchHhHHH
Q 016908 5 EQRHVALRINASEEAALMELLNFMYSNTL-STTAAPALLDVLMAADKFEVASCMR 58 (380)
Q Consensus 5 ~~~~V~L~~~~v~~~~f~~lL~fiYtg~i-~i~~~~~v~~ll~aA~~lqi~~l~~ 58 (380)
.+.+|+|+ ++++++|+.+|+|+|||++ .++. +++.+++.+|++||++.|++
T Consensus 64 ~~~~i~l~--~~~~~~f~~~l~~~Ytg~~~~~~~-~~~~~ll~~A~~l~i~~L~~ 115 (116)
T 3fkc_A 64 AGQVVELS--FIRAEIFAEILNYIYSSKIVRVRS-DLLDELIKSGQLLGVKFIAA 115 (116)
T ss_dssp CCSEEEEC--SSCHHHHHHHHHHHTTSCCCSCCH-HHHHHHHHHHHHHTCHHHHT
T ss_pred CCCEEEeC--CCCHHHHHHHHHhhcCCCcCCCCH-HHHHHHHHHHHHhCccccCc
Confidence 35688887 9999999999999999999 7886 99999999999999999874
No 23
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=98.27 E-value=4.7e-07 Score=77.44 Aligned_cols=72 Identities=13% Similarity=0.302 Sum_probs=48.3
Q ss_pred ceEEEecCCCCHHHHHHHhHhHhcCc---------------------------eecCCcchHHHHHHHHHHhchHhHHHH
Q 016908 7 RHVALRINASEEAALMELLNFMYSNT---------------------------LSTTAAPALLDVLMAADKFEVASCMRY 59 (380)
Q Consensus 7 ~~V~L~~~~v~~~~f~~lL~fiYtg~---------------------------i~i~~~~~v~~ll~aA~~lqi~~l~~~ 59 (380)
+.|.|+ +|++.+|+.+++|+|+.. +.++. +++.+|+.||++|+|..|+++
T Consensus 40 ~~Ipl~--~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~~i~~wD~~Fl~vd~-~~l~eLi~AAnyL~I~~Lldl 116 (160)
T 2p1m_A 40 NGVPLP--NVTSKILAKVIEYCKRHVEAAASKAEAVEGAATSDDDLKAWDADFMKIDQ-ATLFELILAANYLNIKNLLDL 116 (160)
T ss_dssp ---CCT--TSCHHHHHHHHHC-------------------------------------------CHHHHHHTTCHHHHHH
T ss_pred CceeCC--cCcHHHHHHHHHHHHHcccCCCcccccccccccccchhhHHHHHHHcCCH-HHHHHHHHHHHHHhHHHHHHH
Confidence 345555 999999999999999976 46776 899999999999999999999
Q ss_pred HHHHhhcCCC---ChHhHHHHHHhcc
Q 016908 60 CSRLLRNMPM---TPESALLYLELPS 82 (380)
Q Consensus 60 C~~fL~~~~l---~~~Ncl~i~~~a~ 82 (380)
||+++.+ .| +++.+-.++.++.
T Consensus 117 ~c~~vA~-~ikgkt~eeir~~f~I~n 141 (160)
T 2p1m_A 117 TCQTVAD-MIKGKTPEEIRTTFNIKN 141 (160)
T ss_dssp HHHHHHH-TTTTCCHHHHHHHTTCCC
T ss_pred HHHHHHH-HHcCCCHHHHHHHcCCCC
Confidence 9999999 68 8888777776654
No 24
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=98.20 E-value=7.6e-07 Score=74.53 Aligned_cols=70 Identities=13% Similarity=0.233 Sum_probs=59.0
Q ss_pred cceEEEecCCCCHHHHHHHhHhHhcCc--------------------------eecCCcchHHHHHHHHHHhchHhHHHH
Q 016908 6 QRHVALRINASEEAALMELLNFMYSNT--------------------------LSTTAAPALLDVLMAADKFEVASCMRY 59 (380)
Q Consensus 6 ~~~V~L~~~~v~~~~f~~lL~fiYtg~--------------------------i~i~~~~~v~~ll~aA~~lqi~~l~~~ 59 (380)
.+.|.|+ +|++.+|+.+++|+|... +.++. +++.+|+.||++|+|..|+++
T Consensus 36 ~~~Ipl~--~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~i~~wD~~F~~vd~-~~l~eLi~AAnyL~I~~Lldl 112 (141)
T 1fs1_B 36 MDPVPLP--NVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQ-GTLFELILAANYLDIKGLLDV 112 (141)
T ss_dssp CSSEECT--TCCHHHHHHHHHHHHHHTTCC-----------------HHHHHHTCSCH-HHHHHHHHHHHHHTCHHHHHH
T ss_pred CCceecC--CcCHHHHHHHHHHHHHhccCCCccccccccccchhhhhHHHHHHHhCCH-HHHHHHHHHHHHHhhhHHHHH
Confidence 3457766 999999999999999866 66775 899999999999999999999
Q ss_pred HHHHhhcCCCChHhHHHHHH
Q 016908 60 CSRLLRNMPMTPESALLYLE 79 (380)
Q Consensus 60 C~~fL~~~~l~~~Ncl~i~~ 79 (380)
||+++.+ .|...+.-.|..
T Consensus 113 ~c~~vA~-~ikgkt~eeiR~ 131 (141)
T 1fs1_B 113 TCKTVAN-MIKGKTPEEIRK 131 (141)
T ss_dssp HHHHHHH-HHTTCCHHHHHH
T ss_pred HHHHHHH-HHcCCCHHHHHH
Confidence 9999999 576666555554
No 25
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=97.76 E-value=2.4e-05 Score=60.90 Aligned_cols=48 Identities=21% Similarity=0.350 Sum_probs=39.1
Q ss_pred CCCCcceEEEecCCCCHHHHHHHhHhHh-----c---Ccee---cCCcchHHHHHHHHHHhc
Q 016908 2 KESEQRHVALRINASEEAALMELLNFMY-----S---NTLS---TTAAPALLDVLMAADKFE 52 (380)
Q Consensus 2 ~Es~~~~V~L~~~~v~~~~f~~lL~fiY-----t---g~i~---i~~~~~v~~ll~aA~~lq 52 (380)
+|+.++.|.|+ ++++.+|+.+++|+| + +++. ++. +++.+|+.||++|+
T Consensus 38 ~E~~~~~I~l~--~V~~~iL~kViey~~~h~~~~~~~~~i~~~~i~~-~~l~eLl~AAnyL~ 96 (97)
T 4ajy_C 38 AENETNEVNFR--EIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAP-EIALELLMAANFLD 96 (97)
T ss_dssp -----CEEECT--TSCHHHHHHHHHHHHHHHHHTTCCSCCCCCCCCG-GGHHHHHHHHHHHT
T ss_pred cccCCCceECC--CCCHHHHHHHHHHHHHhcccCCCcCCCCcCcCCH-HHHHHHHHHHhhhC
Confidence 46667788887 999999999999999 5 7777 876 99999999999997
No 26
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.76 E-value=0.00018 Score=66.83 Aligned_cols=52 Identities=21% Similarity=0.259 Sum_probs=42.7
Q ss_pred CCc-cceEEE-ec--CCcEEEEecCCCCeeEE---cccCCcceeeEeeCCeEeeccceeecCC
Q 016908 225 RRF-VERAYK-YR--PVKVVEFERPRQQCVVY---LDLKREECENLFPSGRVYSQAFHLGGQG 280 (380)
Q Consensus 225 R~~-~~~ly~-~~--~~~~ve~ydp~~~~W~~---l~~~r~~~~~~~~~g~IY~~~~viGG~~ 280 (380)
|+. .+.||+ ++ ..+.++.|||.+++|.. ||.+|.+|++++++++|| ++||..
T Consensus 7 r~~~~~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~ly----v~GG~~ 65 (306)
T 3ii7_A 7 RRKKHDYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVY----ILGGSQ 65 (306)
T ss_dssp ---CCCEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEE----EECCBS
T ss_pred CccccceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEECCEEE----EEeCCC
Confidence 543 367887 32 37899999999999999 788999999999999999 999964
No 27
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=97.75 E-value=4.3e-06 Score=87.75 Aligned_cols=120 Identities=10% Similarity=-0.010 Sum_probs=77.3
Q ss_pred HHHhhCCChHHHHHHHHHHhcccccCCCCCHHHHHhhhccCCCCh--h---HHHHHHHHHHHhhhcCCcccccccccccc
Q 016908 147 WARAQYPRVEERREVLGSRLARFIRFPHMTCRKLKKVLTCNDFDH--D---VASKLVLEALFFKAEAPHRQRTLAAEESV 221 (380)
Q Consensus 147 Wi~~d~~~~~~R~~~l~~~Ll~~VRf~~l~~~~L~~~~~~~~l~~--~---~c~~~i~ea~~~~~~~~~~~~~l~~~~~~ 221 (380)
|+.++ ...|.+.+ +.|++.++|++|.+.|+.....+++.+. + .|.++... .-.. ....+ ....+...
T Consensus 315 ~~~~~---e~~R~~~l-E~ldE~e~~~l~~~hY~~~~a~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~-~~~~~~~p 386 (695)
T 2zwa_A 315 SADEA---TKKELLKV-EPFDELEEFHLFCHHYVLCHATNYKEFAFTQGFLFDRSISEI--NLTV-DEDYQ-LLECECPI 386 (695)
T ss_dssp HSCHH---HHHHHHHH-SCCCCHHHHHHHHHTEEEEEEESCTTCCCCTTTCCCC----C--CCEE-CSSEE-EEECCCTT
T ss_pred hCCHH---HHHHHHhc-cccchHHHHHHhhccEEEEEEecCCccccCcccCCCCccccc--cCCC-CCcee-EeccCCCC
Confidence 89887 67788888 8999999999998888877666655432 1 22222110 0000 00000 01111112
Q ss_pred cCCCCc------cceEEE-ec----CCcEEEEecCCCCeeEEc---------ccCCcceeeEee--CCeEeeccceeecC
Q 016908 222 TLNRRF------VERAYK-YR----PVKVVEFERPRQQCVVYL---------DLKREECENLFP--SGRVYSQAFHLGGQ 279 (380)
Q Consensus 222 p~~R~~------~~~ly~-~~----~~~~ve~ydp~~~~W~~l---------~~~r~~~~~~~~--~g~IY~~~~viGG~ 279 (380)
+ |++ .+.||+ ++ ..+++++|||.+++|..+ |.+|.+|+++++ +|+|| ++||.
T Consensus 387 ~--rr~g~~~~~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~ly----v~GG~ 460 (695)
T 2zwa_A 387 N--RKFGDVDVAGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLL----LIGGR 460 (695)
T ss_dssp C--CBSCEEEECSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEE----EECCB
T ss_pred C--CceeEEEEECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEE----EEcCC
Confidence 2 332 256777 22 467899999999999973 467999999999 99999 99996
Q ss_pred C
Q 016908 280 G 280 (380)
Q Consensus 280 ~ 280 (380)
.
T Consensus 461 ~ 461 (695)
T 2zwa_A 461 K 461 (695)
T ss_dssp S
T ss_pred C
Confidence 4
No 28
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.63 E-value=0.00037 Score=64.39 Aligned_cols=58 Identities=24% Similarity=0.275 Sum_probs=41.4
Q ss_pred cccccccCCCCc-cceEEE-ec------CCcEEEEecCCCCeeEE---cccCCcceeeEeeCCeEeeccceeecC
Q 016908 216 AAEESVTLNRRF-VERAYK-YR------PVKVVEFERPRQQCVVY---LDLKREECENLFPSGRVYSQAFHLGGQ 279 (380)
Q Consensus 216 ~~~~~~p~~R~~-~~~ly~-~~------~~~~ve~ydp~~~~W~~---l~~~r~~~~~~~~~g~IY~~~~viGG~ 279 (380)
++++++| |.. .+.||+ ++ ..+.+++|||.+++|.. +|.+|.+|++++.+++|| ++||.
T Consensus 3 ~~~~~~p--r~~~~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~----v~GG~ 71 (301)
T 2vpj_A 3 QGPRTRA--RLGANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIY----VIGGY 71 (301)
T ss_dssp ------------CCEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEE----EECCB
T ss_pred CCccccc--cccCCCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEE----EEcCC
Confidence 3445567 653 367777 22 36789999999999999 788999999999999999 99995
No 29
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.56 E-value=0.00035 Score=64.66 Aligned_cols=56 Identities=16% Similarity=0.149 Sum_probs=41.5
Q ss_pred cccccCCCCc---cceEEEe-c----CCcEEEEecCCCCeeEE---cccCCcceeeEeeCCeEeeccceeecC
Q 016908 218 EESVTLNRRF---VERAYKY-R----PVKVVEFERPRQQCVVY---LDLKREECENLFPSGRVYSQAFHLGGQ 279 (380)
Q Consensus 218 ~~~~p~~R~~---~~~ly~~-~----~~~~ve~ydp~~~~W~~---l~~~r~~~~~~~~~g~IY~~~~viGG~ 279 (380)
++++| |.. .+.||+. + ..+.+++|||.+++|.. ||.+|..|++++.+++|| ++||.
T Consensus 4 ~~~~~--r~~~~~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~ly----v~GG~ 70 (302)
T 2xn4_A 4 VRTRL--RTPMNLPKLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVF----AVGGF 70 (302)
T ss_dssp -------------CEEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEE----EESCB
T ss_pred CcccC--CcccCCCCEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEEECCEEE----EEeCc
Confidence 34455 553 3678872 2 35789999999999998 788999999999999999 99995
No 30
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.52 E-value=0.00038 Score=64.43 Aligned_cols=47 Identities=17% Similarity=0.161 Sum_probs=40.9
Q ss_pred ceEEE-ec-----CCcEEEEecCCCCeeEE---cccCCcceeeEeeCCeEeeccceeecC
Q 016908 229 ERAYK-YR-----PVKVVEFERPRQQCVVY---LDLKREECENLFPSGRVYSQAFHLGGQ 279 (380)
Q Consensus 229 ~~ly~-~~-----~~~~ve~ydp~~~~W~~---l~~~r~~~~~~~~~g~IY~~~~viGG~ 279 (380)
+.||+ ++ ..+.++.|||.+++|.. ||.+|..+++++++|+|| ++||.
T Consensus 109 ~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iy----v~GG~ 164 (302)
T 2xn4_A 109 GLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLY----AVGGY 164 (302)
T ss_dssp TEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEE----EECCE
T ss_pred CEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEE----EEeCC
Confidence 66777 22 35789999999999999 888999999999999999 99995
No 31
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.50 E-value=0.00035 Score=64.80 Aligned_cols=48 Identities=17% Similarity=0.249 Sum_probs=41.9
Q ss_pred ceEEEe-----cCCcEEEEecCCCCeeEE---cccCCcceeeEeeCCeEeeccceeecCC
Q 016908 229 ERAYKY-----RPVKVVEFERPRQQCVVY---LDLKREECENLFPSGRVYSQAFHLGGQG 280 (380)
Q Consensus 229 ~~ly~~-----~~~~~ve~ydp~~~~W~~---l~~~r~~~~~~~~~g~IY~~~~viGG~~ 280 (380)
+.||+. ...+.++.|||.+++|.. ||.+|..|++++++|+|| ++||.+
T Consensus 56 ~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iy----v~GG~~ 111 (306)
T 3ii7_A 56 NVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAAEGKIY----TSGGSE 111 (306)
T ss_dssp TEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEETTEEE----EECCBB
T ss_pred CEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEECCEEE----EECCCC
Confidence 567772 246899999999999998 889999999999999999 999964
No 32
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.46 E-value=0.00027 Score=66.04 Aligned_cols=48 Identities=13% Similarity=0.093 Sum_probs=41.6
Q ss_pred ceEEEec-------CCcEEEEecCCCCeeEE---cccCCcceeeEeeCCeEeeccceeecCC
Q 016908 229 ERAYKYR-------PVKVVEFERPRQQCVVY---LDLKREECENLFPSGRVYSQAFHLGGQG 280 (380)
Q Consensus 229 ~~ly~~~-------~~~~ve~ydp~~~~W~~---l~~~r~~~~~~~~~g~IY~~~~viGG~~ 280 (380)
+.||+.+ ..+.++.|||.+++|+. ||.+|..|++++++|+|| ++||..
T Consensus 149 ~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iy----v~GG~~ 206 (315)
T 4asc_A 149 DLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVHDGRII----VAAGVT 206 (315)
T ss_dssp TEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEE----EEEEEC
T ss_pred CEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEECCEEE----EEeccC
Confidence 6678722 25799999999999999 888999999999999999 999963
No 33
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.36 E-value=0.0014 Score=60.46 Aligned_cols=48 Identities=23% Similarity=0.277 Sum_probs=41.6
Q ss_pred ceEEEec------CCcEEEEecCCCCeeEE---cccCCcceeeEeeCCeEeeccceeecCC
Q 016908 229 ERAYKYR------PVKVVEFERPRQQCVVY---LDLKREECENLFPSGRVYSQAFHLGGQG 280 (380)
Q Consensus 229 ~~ly~~~------~~~~ve~ydp~~~~W~~---l~~~r~~~~~~~~~g~IY~~~~viGG~~ 280 (380)
+.||+.+ ..+.++.|||.+++|+. ||.+|..+++++++|+|| ++||..
T Consensus 113 ~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iy----v~GG~~ 169 (301)
T 2vpj_A 113 DMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIY----CLGGYD 169 (301)
T ss_dssp TEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEE----EECCBC
T ss_pred CEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEE----EECCCC
Confidence 6677722 36799999999999998 889999999999999999 999953
No 34
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.32 E-value=0.00079 Score=62.85 Aligned_cols=47 Identities=21% Similarity=0.259 Sum_probs=40.6
Q ss_pred ceEEE-ec-------CCcEEEEecCCCCeeEE---cccCCcceeeEeeCCeEeeccceeecC
Q 016908 229 ERAYK-YR-------PVKVVEFERPRQQCVVY---LDLKREECENLFPSGRVYSQAFHLGGQ 279 (380)
Q Consensus 229 ~~ly~-~~-------~~~~ve~ydp~~~~W~~---l~~~r~~~~~~~~~g~IY~~~~viGG~ 279 (380)
+.||+ ++ ..+.+++|||.+++|+. ||.+|..|++++.+|+|| ++||.
T Consensus 110 ~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iy----v~GG~ 167 (318)
T 2woz_A 110 DKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIY----CLGGK 167 (318)
T ss_dssp TEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEE----EECCE
T ss_pred CEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEE----EEcCC
Confidence 56777 22 24689999999999998 888999999999999999 99995
No 35
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.31 E-value=0.0012 Score=61.41 Aligned_cols=48 Identities=17% Similarity=0.136 Sum_probs=41.6
Q ss_pred ceEEEec------CCcEEEEecCCCCeeEE---cccCCcceeeEeeCCeEeeccceeecCC
Q 016908 229 ERAYKYR------PVKVVEFERPRQQCVVY---LDLKREECENLFPSGRVYSQAFHLGGQG 280 (380)
Q Consensus 229 ~~ly~~~------~~~~ve~ydp~~~~W~~---l~~~r~~~~~~~~~g~IY~~~~viGG~~ 280 (380)
+.||+.+ ..+.++.|||.+++|.. ||.+|..+++++++++|| ++||..
T Consensus 122 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iy----v~GG~~ 178 (308)
T 1zgk_A 122 GHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLY----AVGGFD 178 (308)
T ss_dssp TEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEE----EECCBC
T ss_pred CEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEECCEEE----EEeCCC
Confidence 6677722 36789999999999999 788999999999999999 999953
No 36
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.31 E-value=0.00091 Score=62.35 Aligned_cols=39 Identities=18% Similarity=-0.016 Sum_probs=36.8
Q ss_pred CcEEEEecCCCCeeEE---cccCCcceeeEeeCCeEeeccceeecC
Q 016908 237 VKVVEFERPRQQCVVY---LDLKREECENLFPSGRVYSQAFHLGGQ 279 (380)
Q Consensus 237 ~~~ve~ydp~~~~W~~---l~~~r~~~~~~~~~g~IY~~~~viGG~ 279 (380)
.+.+++|||.+++|+. ||.+|..|++++.+++|| ++||.
T Consensus 116 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iy----v~GG~ 157 (315)
T 4asc_A 116 LDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVY----VIGGK 157 (315)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEE----EECCB
T ss_pred cceEEEECCCCCcEeECCCCCCcccceeEEEECCEEE----EEeCC
Confidence 5789999999999999 789999999999999999 99996
No 37
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.30 E-value=0.0013 Score=61.20 Aligned_cols=39 Identities=15% Similarity=0.262 Sum_probs=36.3
Q ss_pred CcEEEEecCCCCeeEE---cccCCcceeeEeeCCeEeeccceeecC
Q 016908 237 VKVVEFERPRQQCVVY---LDLKREECENLFPSGRVYSQAFHLGGQ 279 (380)
Q Consensus 237 ~~~ve~ydp~~~~W~~---l~~~r~~~~~~~~~g~IY~~~~viGG~ 279 (380)
.+.++.|||.+++|.. ||.+|..+++++++|+|| ++||.
T Consensus 89 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iy----v~GG~ 130 (308)
T 1zgk_A 89 SSALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIY----AVGGS 130 (308)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBTCEEEEETTEEE----EECCE
T ss_pred cceEEEECCCCCeEeECCCCCcCccccEEEEECCEEE----EEcCC
Confidence 4689999999999999 788999999999999999 99994
No 38
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.28 E-value=0.00059 Score=63.74 Aligned_cols=47 Identities=15% Similarity=0.101 Sum_probs=41.2
Q ss_pred ceEEEec-------CCcEEEEecCCCCeeEE---cccCCcceeeEeeCCeEeeccceeecC
Q 016908 229 ERAYKYR-------PVKVVEFERPRQQCVVY---LDLKREECENLFPSGRVYSQAFHLGGQ 279 (380)
Q Consensus 229 ~~ly~~~-------~~~~ve~ydp~~~~W~~---l~~~r~~~~~~~~~g~IY~~~~viGG~ 279 (380)
+.||+.+ ..+.++.|||.+++|.. ||.+|..|++++++|+|| ++||.
T Consensus 159 ~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iy----v~GG~ 215 (318)
T 2woz_A 159 GMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIV----IAGGV 215 (318)
T ss_dssp TEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEE----EEEEE
T ss_pred CEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEECCEEE----EEcCc
Confidence 6677722 36789999999999999 788999999999999999 99995
No 39
>3ivv_A Speckle-type POZ protein; protein binding, nucleus, UBL conjugation pathway, ligase; 1.25A {Homo sapiens} SCOP: b.8.1.1 PDB: 3ivq_A 3ivb_A 3hsv_A 3hqh_A 3hqm_A 3hql_A 2cr2_A
Probab=97.19 E-value=0.00037 Score=57.98 Aligned_cols=114 Identities=17% Similarity=0.252 Sum_probs=72.4
Q ss_pred eCCeEeeccceeecC---CcccccccccCCCCCceeeEEEEeeeccCceeeEEeeeeeecccccccccc-ccceeEEeeC
Q 016908 265 PSGRVYSQAFHLGGQ---GFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARSKPTEEFVS-KYKGNYTFTG 340 (380)
Q Consensus 265 ~~g~IY~~~~viGG~---~~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~~~~~~~tg 340 (380)
.+..|+|..|.+||+ .|.+....+-+........++++.+...+.-++.+.+.+..-+........ .....|.|..
T Consensus 27 ~g~~~~S~~F~~gg~~g~~W~i~~yP~G~~~~~~~~lSlyL~l~~~~~w~v~a~f~l~llnq~~~~~~~~~~~~~~~F~~ 106 (145)
T 3ivv_A 27 MGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSCPKSEVRAKFKFSILNAKGEETKAMESQRAYRFVQ 106 (145)
T ss_dssp TTCCEECCCEEESGGGCEEEEEEEETTCSSGGGTTEEEEEEEEEECSSSEEEEEEEEEEECTTSCEEEEEECSSCEEEET
T ss_pred CCCEEECCCcCCCCcCCceEEEEEEcCCCCCCCCCeEEEEEEEcCCCCCcEEEEEEEEEEecCCCceeeecccceEEecC
Confidence 356799999999996 777654432222222345667776554444467777777766643332221 1124577775
Q ss_pred CcccccccCCCCCCceeeeCCCceeecceeEEEeeeeecC
Q 016908 341 GKAVGYRNLFAIPWTSFMADDSLYFINGILHLRAELTIRH 380 (380)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 380 (380)
+.++||..+ ++|..+.+..+.|-+|+.++++++++|++
T Consensus 107 ~~~wG~~~F--i~~~~L~~~~~~yl~dD~l~I~~~V~V~~ 144 (145)
T 3ivv_A 107 GKDWGFKKF--IRRDFLLDEANGLLPDDKLTLFCEVSVVQ 144 (145)
T ss_dssp TCEEEEEEE--EEHHHHHCGGGCSSGGGCEEEEEEEEECC
T ss_pred CCCcCHHHe--EEhhhhccccCCcEeCCEEEEEEEEEEEe
Confidence 555666444 56666655567899999999999999974
No 40
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.10 E-value=0.00092 Score=63.36 Aligned_cols=47 Identities=15% Similarity=0.174 Sum_probs=40.3
Q ss_pred ceEEEe--cCCcEEEEecCC--CCeeEE---cc-cCCcceeeEeeCCeEeeccceeecC
Q 016908 229 ERAYKY--RPVKVVEFERPR--QQCVVY---LD-LKREECENLFPSGRVYSQAFHLGGQ 279 (380)
Q Consensus 229 ~~ly~~--~~~~~ve~ydp~--~~~W~~---l~-~~r~~~~~~~~~g~IY~~~~viGG~ 279 (380)
+.||+. ...+.+++||+. +++|.. || .+|..|++++++|+|| ++||.
T Consensus 20 ~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~ly----v~GG~ 74 (357)
T 2uvk_A 20 DTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLY----VFGGI 74 (357)
T ss_dssp TEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEE----EECCE
T ss_pred CEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEE----EEcCC
Confidence 667882 235689999998 499999 78 7999999999999999 99997
No 41
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=97.08 E-value=0.00072 Score=58.01 Aligned_cols=57 Identities=9% Similarity=0.248 Sum_probs=48.0
Q ss_pred ceEEEecCCCCHHHHHHHhHhHhcCc-------------------------eecCCcchHHHHHHHHHHhchHhHHHHHH
Q 016908 7 RHVALRINASEEAALMELLNFMYSNT-------------------------LSTTAAPALLDVLMAADKFEVASCMRYCS 61 (380)
Q Consensus 7 ~~V~L~~~~v~~~~f~~lL~fiYtg~-------------------------i~i~~~~~v~~ll~aA~~lqi~~l~~~C~ 61 (380)
..|.|+ +|+..+|+.+++|++.-. +.++. +.+.+|+.||++|+|..|++.||
T Consensus 50 ~~Iplp--nV~s~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~i~~wD~~Fl~vd~-~~LfeLi~AAnyLdIk~Lldl~c 126 (169)
T 3v7d_A 50 IVMPVP--NVRSSVLQKVIEWAEHHRDSNFPDEDDDDSRKSAPVDSWDREFLKVDQ-EMLYEIILAANYLNIKPLLDAGC 126 (169)
T ss_dssp CEEECT--TCCHHHHHHHHHHHHHTTTCCCCC--------CCCCCHHHHHHTCSCH-HHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CceeeC--CCCHHHHHHHHHHHHHcccCCCcccccccccccccccHHHHHHHcCCH-HHHHHHHHHHHHhCcHHHHHHHH
Confidence 456665 999999999999996633 24554 78999999999999999999999
Q ss_pred HHhhc
Q 016908 62 RLLRN 66 (380)
Q Consensus 62 ~fL~~ 66 (380)
+.+.+
T Consensus 127 ~~vA~ 131 (169)
T 3v7d_A 127 KVVAE 131 (169)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99966
No 42
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=97.07 E-value=0.0012 Score=52.16 Aligned_cols=57 Identities=16% Similarity=0.227 Sum_probs=48.0
Q ss_pred ceEEEecCCCCHHHHHHHhHhHhcCceecCCcchHHHHHHHHHHhchHhHHHHHHHHhhc
Q 016908 7 RHVALRINASEEAALMELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRN 66 (380)
Q Consensus 7 ~~V~L~~~~v~~~~f~~lL~fiYtg~i~i~~~~~v~~ll~aA~~lqi~~l~~~C~~fL~~ 66 (380)
+++-| +-+|..|..||+|+.+|++.+...-....+++.|.+|+|++|++.|.+-+.+
T Consensus 50 ~~~fi---DRdp~~F~~IL~~lr~g~l~~p~~~~~~~l~~Ea~fy~l~~L~~~l~~~i~~ 106 (107)
T 3drz_A 50 GAYLI---DRDPTYFGPVLNYLRHGKLVINKDLAEEGVLEEAEFYNITSLIKLVKDKIRE 106 (107)
T ss_dssp SCEEE---CSCHHHHHHHHHHHHHSCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred ceEEe---cCChHHHHHHHHHhCCCeeCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHhc
Confidence 45665 7899999999999999999885423467899999999999999999887654
No 43
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=96.91 E-value=0.0012 Score=69.22 Aligned_cols=49 Identities=14% Similarity=-0.018 Sum_probs=41.9
Q ss_pred cceEEEe-c------CCcEEEEecCCCCeeEE---cccCCcceeeEee-CCeEeeccceeecCC
Q 016908 228 VERAYKY-R------PVKVVEFERPRQQCVVY---LDLKREECENLFP-SGRVYSQAFHLGGQG 280 (380)
Q Consensus 228 ~~~ly~~-~------~~~~ve~ydp~~~~W~~---l~~~r~~~~~~~~-~g~IY~~~~viGG~~ 280 (380)
.+.||+. + .+++++.||+.+++|+. ||.+|..|+++++ +|+|| ++||.+
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iy----v~GG~~ 510 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVL----ILGGVT 510 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEE----EECCBC
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEE----EECCCC
Confidence 4567872 1 46799999999999999 8899999999996 99999 999964
No 44
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.74 E-value=0.0044 Score=58.59 Aligned_cols=39 Identities=13% Similarity=0.095 Sum_probs=34.4
Q ss_pred CcEEEEecCCCCeeEE---cccCCc-ceeeEeeCCeEeeccceeecC
Q 016908 237 VKVVEFERPRQQCVVY---LDLKRE-ECENLFPSGRVYSQAFHLGGQ 279 (380)
Q Consensus 237 ~~~ve~ydp~~~~W~~---l~~~r~-~~~~~~~~g~IY~~~~viGG~ 279 (380)
.+.+++|||.+++|+. ||.+|. .+++++.+++|| ++||.
T Consensus 167 ~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iy----v~GG~ 209 (357)
T 2uvk_A 167 NKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTW----LINGE 209 (357)
T ss_dssp CCEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEE----EECCE
T ss_pred cccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEE----EEeee
Confidence 4799999999999998 776655 499999999999 99995
No 45
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=96.53 E-value=0.0024 Score=59.89 Aligned_cols=113 Identities=17% Similarity=0.240 Sum_probs=71.4
Q ss_pred eCCeEeeccceeecC---CcccccccccCCCCCceeeEEEEeeeccCceeeEEeeeeeeccccccccccc-cceeEEeeC
Q 016908 265 PSGRVYSQAFHLGGQ---GFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARSKPTEEFVSK-YKGNYTFTG 340 (380)
Q Consensus 265 ~~g~IY~~~~viGG~---~~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-~~~~~~~tg 340 (380)
.+..++|..|.+||. .|.+....+-+........++++.....+..++.+.+.+..-+........+ ....|.|+.
T Consensus 23 ~~~~i~S~~F~~gg~~~~~W~i~~yP~G~~~~~~~~lslyL~~~~~~~~~v~a~~~~~l~~~~~~~~~~~~~~~~~~F~~ 102 (312)
T 3hqi_A 23 MGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSCPKSEVRAKFKFSILNAKGEETKAMESQRAYRFVQ 102 (312)
T ss_dssp TTCCEECCCBCC--CCCCEEEEEEETTCCC--CTTEEEEEEEEEECCC-CEEEEEEEEEECTTSCEEEEEECSSCEEECT
T ss_pred CCCeEeeCCcccCCCCCceEEEEEECCCCCccCCCcEEEEEEEcCCCCCcEEEEEEEEEEeCCCCcccccccCCceeCCC
Confidence 367899999999995 7776544222222233456677755443344577777777766533332222 245778886
Q ss_pred CcccccccCCCCCCceeeeCCCceeecceeEEEeeeeec
Q 016908 341 GKAVGYRNLFAIPWTSFMADDSLYFINGILHLRAELTIR 379 (380)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 379 (380)
+.++||.+. ++|..+....+.|-+||.++++++++|+
T Consensus 103 ~~~wG~~~F--i~~~~L~~~~~~yl~dD~l~i~~~v~v~ 139 (312)
T 3hqi_A 103 GKDWGFKKF--IRRGFLLDEANGLLPDDKLTLFCEVSVV 139 (312)
T ss_dssp TCEEEEEEE--EEHHHHTCGGGCCCGGGCEEEEEEEEEE
T ss_pred CCCcCHHHh--ccHHHhhccccCeecCCEEEEEEEEEEE
Confidence 656777555 6777776666779999999999999886
No 46
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=96.04 E-value=0.0044 Score=64.13 Aligned_cols=47 Identities=15% Similarity=0.204 Sum_probs=40.4
Q ss_pred ceEEEec--CCcEEEEecCCCCeeEE---cccCCcceeeEee-CCeEeeccceeecC
Q 016908 229 ERAYKYR--PVKVVEFERPRQQCVVY---LDLKREECENLFP-SGRVYSQAFHLGGQ 279 (380)
Q Consensus 229 ~~ly~~~--~~~~ve~ydp~~~~W~~---l~~~r~~~~~~~~-~g~IY~~~~viGG~ 279 (380)
+.||+.+ ....+++|||.+++|+. |+.+|.+|+++++ +|+|| ++||.
T Consensus 254 g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iy----v~GG~ 306 (656)
T 1k3i_A 254 GQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVF----TIGGS 306 (656)
T ss_dssp SCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEE----EECCC
T ss_pred CCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEE----EEeCc
Confidence 6788833 24589999999999999 8889999999988 99999 99993
No 47
>2foj_A Ubiquitin carboxyl-terminal hydrolase 7; MATH domain, hydrolase; 1.60A {Homo sapiens} PDB: 1yze_A 1yy6_A 2foo_A 2fop_A 3mqr_A 3mqs_C 2f1w_A 2f1x_A 2f1y_A 2xxn_A
Probab=95.90 E-value=0.015 Score=48.67 Aligned_cols=111 Identities=11% Similarity=0.124 Sum_probs=66.4
Q ss_pred CeEeeccceeecCCcccccccccCCC-CCceeeEEEEeeeccC---ceeeEEeeeeeeccccccccccccceeEEeeC-C
Q 016908 267 GRVYSQAFHLGGQGFFLSAHCNMDQQ-SSFHCFGLFLGMQEKG---SVSFAVDYEFAARSKPTEEFVSKYKGNYTFTG-G 341 (380)
Q Consensus 267 g~IY~~~~viGG~~~~l~~~~~~~~~-~~~~~~g~~~~~~~~~---~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~tg-~ 341 (380)
..+||..|.+||..|.+....+-+.. ......++++.+.... .-++.+++.+..-+.....--......+.|.. .
T Consensus 33 ~~~~S~~f~~gg~~W~i~~yP~G~~~~~~~~~lSlyL~~~~~~~~~~w~v~a~~~l~l~~~~~~~~~~~~~~~~~F~~~~ 112 (155)
T 2foj_A 33 ESVLSPPCFVRNLPWKIMVMPRFYPDRPHQKSVGFFLQCNAESDSTSWSCHAQAVLKIINYRDDEKSFSRRISHLFFHKE 112 (155)
T ss_dssp SCEECCCEEETTEEEEEEEEEEC------CBEEEEEEEESTTCCCSSCEEEEEEEEEECCSSCGGGCEEEEEEEEEETTB
T ss_pred CceEcCCEEECCccEEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCEEEEEEEEEEEcCCCCcceEEeccEEEeCCCC
Confidence 67999999999998877544322211 1234567777653221 12466777776655322211111234566763 3
Q ss_pred cccccccCCCCCCceeeeCCCceeecceeEEEeeeeec
Q 016908 342 KAVGYRNLFAIPWTSFMADDSLYFINGILHLRAELTIR 379 (380)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 379 (380)
.+.||..+ ++|..+.+..+.|.+||.|.++|+++|.
T Consensus 113 ~~wG~~~F--i~~~~L~~~~~~yl~dD~l~Ie~~V~V~ 148 (155)
T 2foj_A 113 NDWGFSNF--MAWSEVTDPEKGFIDDDKVTFEVFVQAD 148 (155)
T ss_dssp CEEEEEEE--EEHHHHTCTTTSSCBTTBEEEEEEEEEC
T ss_pred CCEeECCe--EEHHHhcCcCCCceECCEEEEEEEEEEe
Confidence 44566444 5666665546779999999999999985
No 48
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=95.83 E-value=0.0065 Score=46.85 Aligned_cols=48 Identities=21% Similarity=0.326 Sum_probs=36.8
Q ss_pred CCCcceEEEecCCCCHHHHHHHhHhHhcCc-----------eecCCcchHHHHHHHHHHhch
Q 016908 3 ESEQRHVALRINASEEAALMELLNFMYSNT-----------LSTTAAPALLDVLMAADKFEV 53 (380)
Q Consensus 3 Es~~~~V~L~~~~v~~~~f~~lL~fiYtg~-----------i~i~~~~~v~~ll~aA~~lqi 53 (380)
|+..+.|.|+ +|++.+|+.+++|+|.-. -.++. +.+.+|+.||++|+|
T Consensus 38 e~~~~~Ipl~--~V~~~iL~kVieyc~~h~~~~~~~~~i~~w~vd~-~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 38 ENETNEVNFR--EIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAP-EIALELLMAANFLDC 96 (96)
T ss_dssp ----CEEECS--SCCHHHHHHHHHHHHHHHHHHSCCSCCCCCCCCT-TTHHHHHHHHHHHTC
T ss_pred cccCCceeCC--CCCHHHHHHHHHHHHHccccCCCcccCCCcccCH-HHHHHHHHHHHHhCc
Confidence 4445667776 999999999999997643 24655 899999999999985
No 49
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=95.39 E-value=0.016 Score=50.75 Aligned_cols=57 Identities=16% Similarity=0.227 Sum_probs=48.2
Q ss_pred ceEEEecCCCCHHHHHHHhHhHhcCceecCCcchHHHHHHHHHHhchHhHHHHHHHHhhc
Q 016908 7 RHVALRINASEEAALMELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRN 66 (380)
Q Consensus 7 ~~V~L~~~~v~~~~f~~lL~fiYtg~i~i~~~~~v~~ll~aA~~lqi~~l~~~C~~fL~~ 66 (380)
+++-| +-++..|..||+|+.+|++.+...-....+++-|.+|+|++|++.|.+-|.+
T Consensus 56 geyFI---DRDP~~F~~ILnyLRtG~L~lP~~~~~~~l~eEA~FygL~~Lv~~l~~~i~e 112 (202)
T 3drx_A 56 GAYLI---DRDPTYFGPVLNYLRHGKLVINKDLAEEGVLEEAEFYNITSLIKLVKDKIRE 112 (202)
T ss_dssp CCEEE---CSCSTTHHHHHHHHHHSCCCCCTTSCHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred ccEEe---cCChHHHHHHHHHhcCCccCCCCCCCHHHHHHHHHHCCcHHHHHHHHHHHHH
Confidence 45555 6799999999999999999885423457899999999999999999888876
No 50
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=95.28 E-value=0.012 Score=60.74 Aligned_cols=39 Identities=26% Similarity=0.240 Sum_probs=35.4
Q ss_pred CcEEEEecCCCCeeEE---cccCCcceeeEee--CCeEeeccceeecC
Q 016908 237 VKVVEFERPRQQCVVY---LDLKREECENLFP--SGRVYSQAFHLGGQ 279 (380)
Q Consensus 237 ~~~ve~ydp~~~~W~~---l~~~r~~~~~~~~--~g~IY~~~~viGG~ 279 (380)
...++.|||.+++|+. |+.+|..|+++++ +|+|| ++||.
T Consensus 487 ~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~----v~GG~ 530 (656)
T 1k3i_A 487 VFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVF----NGGGG 530 (656)
T ss_dssp CCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEE----EEECC
T ss_pred ccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEE----ecCCC
Confidence 5789999999999999 7889999988877 99999 99994
No 51
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=95.26 E-value=0.015 Score=45.10 Aligned_cols=48 Identities=17% Similarity=0.340 Sum_probs=38.2
Q ss_pred CCCcceEEEecCCCCHHHHHHHhHhHhcCc--------------eecCCcchHHHHHHHHHHhch
Q 016908 3 ESEQRHVALRINASEEAALMELLNFMYSNT--------------LSTTAAPALLDVLMAADKFEV 53 (380)
Q Consensus 3 Es~~~~V~L~~~~v~~~~f~~lL~fiYtg~--------------i~i~~~~~v~~ll~aA~~lqi 53 (380)
|..++.|.|+ +|++.+|+.+++|+|.-+ -.++. +.+.+|+.||++|+|
T Consensus 38 e~~~~~Iplp--~V~~~iL~kVieyc~~h~~~~~~~~~~~~i~~w~vd~-~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 38 RESKGRIELK--QFDSHILEKAVEYLNYNLKYSGVSEDDDEIPEFEIPT-EMSLELLLAADYLSI 99 (99)
T ss_dssp TTCTTEEEET--TSCHHHHHHHHHHHHHHHHHHHHCSSCSSCCCCCCCH-HHHHHHHHHHHHHCC
T ss_pred ccCCCceecC--CcCHHHHHHHHHHHHHhcccCCCccccccCCCccCCH-HHHHHHHHHHHHhCc
Confidence 3344677777 999999999999998743 14554 789999999999985
No 52
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=95.23 E-value=0.015 Score=46.99 Aligned_cols=54 Identities=9% Similarity=0.102 Sum_probs=42.9
Q ss_pred cceEEEecCCCCHHHHHHHhHhHhcCceecCCcchHHHHHHHHHHhchHhHH-HHHHH
Q 016908 6 QRHVALRINASEEAALMELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCM-RYCSR 62 (380)
Q Consensus 6 ~~~V~L~~~~v~~~~f~~lL~fiYtg~i~i~~~~~v~~ll~aA~~lqi~~l~-~~C~~ 62 (380)
.+++-| +=++..|+.||+|+.+|++.+.....+..+++-|++|+|+.+. +.||.
T Consensus 52 ~g~~Fi---DRdp~~F~~ILnflR~G~l~~p~~~~~~~l~~Ea~fy~i~~l~l~~cC~ 106 (124)
T 1s1g_A 52 TKEYFF---DRDPEVFRCVLNFYRTGKLHYPRYECISAYDDELAFYGILPEIIGDCCY 106 (124)
T ss_dssp SCSEEE---CSCHHHHHHHHHHHHHSCBCCCTTSCHHHHHHHHHHTTCCGGGBCHHHH
T ss_pred CCcEEE---cCChHHHHHHHHHHhcCCCCCCCCcCHHHHHHHHHHcCCChHHHHHHHH
Confidence 345666 6799999999999999999875423578999999999998873 55543
No 53
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=94.31 E-value=0.022 Score=47.05 Aligned_cols=52 Identities=10% Similarity=0.117 Sum_probs=41.8
Q ss_pred cceEEEecCCCCHHHHHHHhHhHhcCceecCCcchHHHHHHHHHHhchHhH-HHHH
Q 016908 6 QRHVALRINASEEAALMELLNFMYSNTLSTTAAPALLDVLMAADKFEVASC-MRYC 60 (380)
Q Consensus 6 ~~~V~L~~~~v~~~~f~~lL~fiYtg~i~i~~~~~v~~ll~aA~~lqi~~l-~~~C 60 (380)
.+++-| +=++..|+.||+|+.+|++.+.....+..+++-|++|+|+.+ ++.|
T Consensus 74 ~g~yFi---DRdp~~F~~ILnflR~G~l~~p~~~~~~~l~eEa~fy~i~~l~l~~C 126 (140)
T 2nz0_B 74 TKEYFF---DRDPEVFRCVLNFYRTGKLHYPRYECISAYDDELAFYGILPEIIGDC 126 (140)
T ss_dssp TTEEEE---CSCHHHHHHHHHHHHHSSBCCCTTSCHHHHHHHHHHHTCCGGGBCTT
T ss_pred CCeEEE---eCCcHHHHHHHHHHhcCCcCCCCCcCHHHHHHHHHHcCCChHHHHHH
Confidence 356666 679999999999999999987542357899999999999886 3444
No 54
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=94.26 E-value=0.018 Score=45.16 Aligned_cols=53 Identities=11% Similarity=0.154 Sum_probs=41.8
Q ss_pred cceEEEecCCCCHHHHHHHhHhHhcCceecCCcchHHHHHHHHHHhchHhH-HHHHH
Q 016908 6 QRHVALRINASEEAALMELLNFMYSNTLSTTAAPALLDVLMAADKFEVASC-MRYCS 61 (380)
Q Consensus 6 ~~~V~L~~~~v~~~~f~~lL~fiYtg~i~i~~~~~v~~ll~aA~~lqi~~l-~~~C~ 61 (380)
.+++-| +=++..|+.||+|+.+|++.+.....+..+++-|++|+|+.+ ++.||
T Consensus 39 ~~~~Fi---DRdp~~F~~ILnflR~g~l~~p~~~~~~~l~~Ea~fy~i~~l~~~~cc 92 (105)
T 1nn7_A 39 TQQYFF---DRDPDIFRHILNFYRTGKLHYPRHECISAYDEELAFFGLIPEIIGDCC 92 (105)
T ss_dssp GTEEEE---CSCTTTHHHHHHHHHHSCBCCCTTSCHHHHHHHHHHHTCCSCCBCHHH
T ss_pred CCcEEE---eCCcHHHHHHHHHHhcCCCCCCCCcCHHHHHHHHHHcCCCHHHHHHHH
Confidence 345666 679999999999999999987542357899999999999876 34454
No 55
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=93.96 E-value=0.032 Score=44.23 Aligned_cols=45 Identities=18% Similarity=0.288 Sum_probs=35.7
Q ss_pred cceEEEecCCCCHHHHHHHhHhHhcCc-----------eecCCcchHHHHHHHHHHhch
Q 016908 6 QRHVALRINASEEAALMELLNFMYSNT-----------LSTTAAPALLDVLMAADKFEV 53 (380)
Q Consensus 6 ~~~V~L~~~~v~~~~f~~lL~fiYtg~-----------i~i~~~~~v~~ll~aA~~lqi 53 (380)
.+.|.|+ +|+..+|+.+++|++.-. -.++. +.+.+|+.||++|+|
T Consensus 57 ~~~Iplp--nV~s~iL~kVieyc~~h~~~~~~~~~i~~w~vd~-~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 57 TNEVNFR--EIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAP-EIALELLMAANFLDC 112 (112)
T ss_dssp -CEEECS--SCCHHHHHHHHHHHHHHHHHSSCSSCCCCCCCCH-HHHHHHHHHHHHHTC
T ss_pred CCceeCC--CCCHHHHHHHHHHHHHhhhccCCcCCCCCcccCH-HHHHHHHHHHHHhCc
Confidence 3466666 999999999999996643 24554 899999999999985
No 56
>2f1z_A Ubiquitin carboxyl-terminal hydrolase 7; hausp, USP7, UBP, deubiquitinating enzyme, substrate recognition; 3.20A {Homo sapiens}
Probab=93.27 E-value=0.1 Score=52.41 Aligned_cols=110 Identities=10% Similarity=0.121 Sum_probs=67.9
Q ss_pred eEeeccceeecCCcccccccccCCCC-CceeeEEEEeeeccCc---eeeEEeeeeeeccccccccccccceeEEee-CCc
Q 016908 268 RVYSQAFHLGGQGFFLSAHCNMDQQS-SFHCFGLFLGMQEKGS---VSFAVDYEFAARSKPTEEFVSKYKGNYTFT-GGK 342 (380)
Q Consensus 268 ~IY~~~~viGG~~~~l~~~~~~~~~~-~~~~~g~~~~~~~~~~---~~~~~~~~~~~r~~~~~~~~~~~~~~~~~t-g~~ 342 (380)
.+||..|.+||..|.+....+-+... .....++++....... -++.+.+.+..-+...+.--......+.|. .+.
T Consensus 46 ~~~S~~F~vgg~~W~i~~yP~G~~~~~~~~~lSlyL~~~~~~~~~~w~v~a~f~l~l~n~~~~~~~~~~~~~~~F~~~~~ 125 (522)
T 2f1z_A 46 SVLSPPCFVRNLPWKIMVMPRFYPDRPHQKSVGFFLQCNAESDSTSWSCHAQAVLKIINYRDDEKSFSRRISHLFFHKEN 125 (522)
T ss_dssp CEECCCEEETTEEEEEEECBC--------CBBCEEEEESTTCCCSSCBEEEEEEEEECCTTCGGGCEEEECCEEECGGGC
T ss_pred ceeCCCEEECCEeeEEEEEeCCCCCCCCCCeEEEEEEecCCCCCCCceEEEEEEEEEEcCCCCccceeccceeEecCCCC
Confidence 79999999999998876442221111 2344667775532211 126777777766533222211224557776 455
Q ss_pred ccccccCCCCCCceeeeCCCceeecceeEEEeeeeec
Q 016908 343 AVGYRNLFAIPWTSFMADDSLYFINGILHLRAELTIR 379 (380)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 379 (380)
++|+.+. ++|..+.+..+.|..|+.++++++++|.
T Consensus 126 ~wG~~~F--i~~~~L~~~~~g~L~nD~l~i~~~V~v~ 160 (522)
T 2f1z_A 126 DWGFSNF--MAWSEVTDPEKGFIDDDKVTFEVFVQAD 160 (522)
T ss_dssp EEEESSS--SBHHHHSCGGGSSCBTTBEEEEEEEEEC
T ss_pred Ccchhhe--eEhhHhcCcccCcccCCcEEEEEEeecc
Confidence 6787665 7888887666778889999999998874
No 57
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=92.72 E-value=0.13 Score=39.70 Aligned_cols=49 Identities=12% Similarity=0.105 Sum_probs=39.7
Q ss_pred cceEEEecCCCCHHHHHHHhHhHhc-CceecCCcchHHHHHHHHHHhchHhHH
Q 016908 6 QRHVALRINASEEAALMELLNFMYS-NTLSTTAAPALLDVLMAADKFEVASCM 57 (380)
Q Consensus 6 ~~~V~L~~~~v~~~~f~~lL~fiYt-g~i~i~~~~~v~~ll~aA~~lqi~~l~ 57 (380)
.+++-+ +-++..|+.||+|+.+ |++.+.....+..+++-|.+|+|+++.
T Consensus 41 ~~eyFi---DRdp~~F~~ILnflR~~G~l~~p~~~~~~~~~~Ea~fy~i~~~~ 90 (100)
T 1t1d_A 41 RNEYFF---DRNRPSFDAILYFYQSGGRLRRPVNVPLDVFSEEIKFYELGENA 90 (100)
T ss_dssp TTEEEE---CSCSTTHHHHHHHHHTTSCCCCCTTSCHHHHHHHHHHTTCCHHH
T ss_pred ceeEEE---cCChHHHHHHHHHHhcCCcccCCCCCCHHHHHHHHHHcCCCHHH
Confidence 346666 6799999999999999 899875424578899999999997644
No 58
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=92.08 E-value=0.06 Score=42.82 Aligned_cols=49 Identities=8% Similarity=0.026 Sum_probs=39.9
Q ss_pred cceEEEecCCCCHHHHHHHhHhHhcCceecCCcchHHHHHHHHHHhchHhHH
Q 016908 6 QRHVALRINASEEAALMELLNFMYSNTLSTTAAPALLDVLMAADKFEVASCM 57 (380)
Q Consensus 6 ~~~V~L~~~~v~~~~f~~lL~fiYtg~i~i~~~~~v~~ll~aA~~lqi~~l~ 57 (380)
.+++-| +-++..|..||+|+.+|++.+...-.+..+++-|.+|+|++..
T Consensus 45 ~g~~Fi---DRdp~~F~~ILnylR~G~l~~p~~~~~~~~~~Ea~fy~i~~~~ 93 (115)
T 3kvt_A 45 LNEYFF---DRHPGVFAQIINYYRSGKLHYPTDVCGPLFEEELEFWGLDSNQ 93 (115)
T ss_dssp TTEEEE---CSCTTTHHHHHHHHHHSCBCCCSSSCHHHHHHHHHHHTCCGGG
T ss_pred CCcEEE---ecChHHHHHHHHHhcCCCCCCCCcccHHHHHHHHHHhCCChHH
Confidence 345666 6799999999999999999885423578999999999997654
No 59
>1ca9_A TRAF2, protein (TNF receptor associated factor 2); TNF signaling, TRAF, adapter protein, cell surviVal; 2.30A {Homo sapiens} SCOP: b.8.1.1 h.1.2.1 PDB: 1qsc_A 1czz_A
Probab=91.91 E-value=0.055 Score=46.91 Aligned_cols=108 Identities=16% Similarity=0.171 Sum_probs=54.6
Q ss_pred eEeecccee--ecCCcccccccccCCCCCceeeEEEEeeecc--C---ceeeEEeeeeeeccccccccccccceeEEeeC
Q 016908 268 RVYSQAFHL--GGQGFFLSAHCNMDQQSSFHCFGLFLGMQEK--G---SVSFAVDYEFAARSKPTEEFVSKYKGNYTFTG 340 (380)
Q Consensus 268 ~IY~~~~vi--GG~~~~l~~~~~~~~~~~~~~~g~~~~~~~~--~---~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~tg 340 (380)
.|||..|.+ ||+.|.+....+-+........++++.+... . .-++.+.+.+..-+......+ ..+++.
T Consensus 66 ~i~S~~F~v~~gG~~W~i~~yP~G~~~~~~~~lSlyL~l~~~~~~~~~~W~~~a~~~l~lldq~~~~~~-----~~~~~~ 140 (192)
T 1ca9_A 66 AIFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDALLRWPFNQKVTLMLLDQNNREHV-----IDAFRP 140 (192)
T ss_dssp CEECCCEESSTTSCEEEEEEETTCCGGGTTTEEEEEEEEECCTTGGGSCSSCCCCEEEEECCTTSSCCE-----EEEECC
T ss_pred eEECceEEeCCCCeEEEEEEEeCCCCCCCCCEEEEEEEEccCCCCCcCCCceEEEEEEEEECCCCCcee-----eEeecc
Confidence 499999999 9999887644222211122346677654321 1 113444455555443222111 112221
Q ss_pred Cccc-ccc-----cCCCCCCceeee-----CCCceeecceeEEEeeeeecC
Q 016908 341 GKAV-GYR-----NLFAIPWTSFMA-----DDSLYFINGILHLRAELTIRH 380 (380)
Q Consensus 341 ~~~~-~~~-----~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~~~~~~ 380 (380)
.... .+. .-.+--|+.||. +.+.|..||.++++++++|..
T Consensus 141 ~~~~~~f~rp~~~~~~~wG~~~Fi~~~~L~~~~gyl~dD~l~I~~~V~V~~ 191 (192)
T 1ca9_A 141 DVTSSSFQRPVNDMNIASGCPLFCPVSKMEAKNSYVRDDAIFIKAIVDLTG 191 (192)
T ss_dssp CTTSGGGSCCSSSBCCCEEEEEEEETHHHHSSCSSCBTTEEEEEEEECCTT
T ss_pred CCchhhhcCCccCCCCCcChhheeEHHHhhhccCCEeCCEEEEEEEEEecC
Confidence 1000 010 001223455554 146799999999999999863
No 60
>4gjh_A TNF receptor-associated factor 5; TRAF domain, immune system; 2.81A {Mus musculus}
Probab=91.88 E-value=0.055 Score=46.39 Aligned_cols=108 Identities=16% Similarity=0.209 Sum_probs=55.6
Q ss_pred eEeeccceee--cCCcccccccccCCCCCceeeEEEEeeeccC-----ceeeEEeeeeeeccccccccccccceeEEeeC
Q 016908 268 RVYSQAFHLG--GQGFFLSAHCNMDQQSSFHCFGLFLGMQEKG-----SVSFAVDYEFAARSKPTEEFVSKYKGNYTFTG 340 (380)
Q Consensus 268 ~IY~~~~viG--G~~~~l~~~~~~~~~~~~~~~g~~~~~~~~~-----~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~tg 340 (380)
.|+|..|.+| |+.|.+....+-+........++++.+.... .-++...+.+..-+...+. ..-..+|+-
T Consensus 47 ~i~S~~F~~g~~G~~W~i~~yP~G~~~~~~~~lSlyL~l~~~~~d~~l~W~v~a~~~l~Lldq~~~~----~~~~~~~~~ 122 (178)
T 4gjh_A 47 SVFSQPFYTSRCGYRLCARAYLNGDGSGKGTHLSLYFVVMRGEFDSLLQWPFRQRVTLMLLDQSGKK----NHIVETFKA 122 (178)
T ss_dssp CEECCCEESSTTSCEEEEEEETTCCGGGTTTEEEEEEEEBCCTTGGGSCSSCCCEEEEEECCTTSSC----CCEEEEEEC
T ss_pred EEECCCeEeCCCCeEEEEEEEECCCCCCCCCEEEEEEEEecCCCCcccCCceEEEEEEEEEcCCCCc----ceeEEeecc
Confidence 6999999999 9988775432222211224566777553211 1134444555554432111 011122321
Q ss_pred Cccc-ccccC-----CCCCCceeee------CCCceeecceeEEEeeeeec
Q 016908 341 GKAV-GYRNL-----FAIPWTSFMA------DDSLYFINGILHLRAELTIR 379 (380)
Q Consensus 341 ~~~~-~~~~~-----~~~~~~~~~~------~~~~~~~~~~~~l~~~~~~~ 379 (380)
..+. -+..+ .+--|+.||. -++.|-+||.|+++++++|.
T Consensus 123 ~~~~~~F~~p~~~~~~~wG~~~Fi~~~~L~~~~~~yL~dD~l~I~~~V~i~ 173 (178)
T 4gjh_A 123 DPNSSSFKRPDGEMNIASGCPRFVSHSTLENSKNTYIKDDTLFLKVAVDLT 173 (178)
T ss_dssp CTTCGGGSCCSSSBCCCEEEEEEEEHHHHHCTTCCSSBTTBEEEEEEECCT
T ss_pred CCccccccCCcccccCCcChhheeEHHHhhccccCcCcCCEEEEEEEEEec
Confidence 1111 11100 1223556665 23779999999999999875
No 61
>1lb6_A TNF receptor-associated factor 6; TRAF6-CD40 complex, signaling protein; 1.80A {Homo sapiens} SCOP: b.8.1.1 PDB: 1lb5_A 1lb4_A
Probab=89.67 E-value=1.1 Score=37.08 Aligned_cols=111 Identities=17% Similarity=0.247 Sum_probs=55.3
Q ss_pred eEeeccceee--cCCcccccccccCCC-CCceeeEEEEeee--c-cCc--eeeEEeeeeeeccccccccccccceeEEee
Q 016908 268 RVYSQAFHLG--GQGFFLSAHCNMDQQ-SSFHCFGLFLGMQ--E-KGS--VSFAVDYEFAARSKPTEEFVSKYKGNYTFT 339 (380)
Q Consensus 268 ~IY~~~~viG--G~~~~l~~~~~~~~~-~~~~~~g~~~~~~--~-~~~--~~~~~~~~~~~r~~~~~~~~~~~~~~~~~t 339 (380)
.|+|..|.+| |+.|.+...-+-+.. ......++++.+. + +.. -++.+.+.+..-+.. +.-.++ .-.+.++
T Consensus 28 ~i~S~~F~vg~~Gy~w~i~~yP~G~~~~~~~~~lSlyL~l~~~~~d~~l~wp~~a~~~l~lldq~-~~~~~~-~~~~~~~ 105 (160)
T 1lb6_A 28 VIHSPGFYTGKPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILDQS-EAPVRQ-NHEEIMD 105 (160)
T ss_dssp EEECCCEESSSSCCEEEEEEEECCTTCTTTTTEEEEEEEEECCTTGGGSCSSCCSEEEEEECCCS-CTTSCC-CEEEEEE
T ss_pred EEECcCeecCCCCeeEEEEEEecCCCCCCCCCEEEEEEEEeecCCCccCCCceeeeEEEEEEcCC-Cccccc-cceEEee
Confidence 7999999999 988876544332221 1123455666442 2 111 123333444444332 221111 1123443
Q ss_pred CCcccc-------cccCCCCCCceeee----CCCceeecceeEEEeeeeecC
Q 016908 340 GGKAVG-------YRNLFAIPWTSFMA----DDSLYFINGILHLRAELTIRH 380 (380)
Q Consensus 340 g~~~~~-------~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~~~~~~ 380 (380)
...... ..|..+--|+.||. ..+.|-.||.|+++++++|++
T Consensus 106 ~~~~~~~f~~p~~~~~~~~~G~~~Fi~~~~L~~~~yl~dD~l~I~~~V~v~~ 157 (160)
T 1lb6_A 106 AKPELLAFQRPTIPRNPKGFGYVTFMHLEALRQRTFIKDDTLLVRCEVSTRF 157 (160)
T ss_dssp CCTTSGGGSCCSSSBCSEEEEEEEEEEGGGGGTSCCCBTTBEEEEEEEEC--
T ss_pred cCCcchhccCCcccCCCCCcCEeeEeEHHHhhhCCCccCCEEEEEEEEEEee
Confidence 221110 11222334566666 346688899999999999874
No 62
>1d00_A Tumor necrosis factor receptor associated protein 2; B-sandwich, protein-peptide complex, apoptosis; 2.00A {Homo sapiens} SCOP: b.8.1.1 h.1.2.1 PDB: 1ca4_A 1d0j_A 1f3v_B 1czy_A 1d01_A 1d0a_A
Probab=88.75 E-value=0.16 Score=42.67 Aligned_cols=108 Identities=17% Similarity=0.170 Sum_probs=51.2
Q ss_pred Eeeccce--eecCCcccccccccCCCCCceeeEEEEeeec---cC--ceeeEEeeeeeeccccccccccccce----eEE
Q 016908 269 VYSQAFH--LGGQGFFLSAHCNMDQQSSFHCFGLFLGMQE---KG--SVSFAVDYEFAARSKPTEEFVSKYKG----NYT 337 (380)
Q Consensus 269 IY~~~~v--iGG~~~~l~~~~~~~~~~~~~~~g~~~~~~~---~~--~~~~~~~~~~~~r~~~~~~~~~~~~~----~~~ 337 (380)
|||+.|. +||+.|.+....+-+........++++.+.. ++ .-++.+.+.+..-+.....-+..... .+.
T Consensus 43 i~S~~F~~~~gG~~W~i~~yP~G~~~~~~~~lSlyL~l~~~~~~~~~~w~~~~~~~l~ll~q~~~~~~~~~~~~~~~~~~ 122 (168)
T 1d00_A 43 IFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDALLRWPFNQKVTLMLLDQNNREHVIDAFRPDVTSSS 122 (168)
T ss_dssp EECCCEESSTTSCEEEEEEETTCCGGGTTTEEEEEEEEECCTTGGGSCSSCCCCEEEEECCTTSSCCEEEEECCCTTSGG
T ss_pred EECCCeecCCCCEEEEEEEEeCCCCCCCCcEEEEEEEEecCCCCccCCCceEEEEEEEEECCCCCccceeccccCcchhh
Confidence 8888885 7899887764432221112245667765432 11 11344445554444321111100000 011
Q ss_pred eeCCcccccccCCCCCCceeee----CCC-ceeecceeEEEeeeeec
Q 016908 338 FTGGKAVGYRNLFAIPWTSFMA----DDS-LYFINGILHLRAELTIR 379 (380)
Q Consensus 338 ~tg~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~l~~~~~~~ 379 (380)
|.... +..+ .+--|+.||. .++ .|.+||.|+++++++|.
T Consensus 123 f~~p~--~~~~-~~~G~~~Fi~~~~L~~~~gyl~dD~l~I~~~V~v~ 166 (168)
T 1d00_A 123 FQRPV--NDMN-IASGCPLFCPVSKMEAKNSYVRDDAIFIKAIVDLT 166 (168)
T ss_dssp GSCCS--SSBC-CCEEEEEEEETTTTTSSSSSSBTTEEEEEEEECCT
T ss_pred ccCCC--cCCC-CCcCcceEeEHHHhcccCCceeCCEEEEEEEEEec
Confidence 11000 0000 1223445555 222 68899999999999985
No 63
>1flk_A TNF receptor associated factor 3; TNF signaling, TRAF3, CD40-binding protein, apoptosis; 2.80A {Homo sapiens} SCOP: b.8.1.1 h.1.2.1 PDB: 1fll_A
Probab=87.39 E-value=1.4 Score=39.17 Aligned_cols=108 Identities=16% Similarity=0.220 Sum_probs=55.1
Q ss_pred eEeeccceee--cCCcccccccccCCCCCceeeEEEEeee--c-cCc--eeeEEeeeeeeccccccccccccceeEEeeC
Q 016908 268 RVYSQAFHLG--GQGFFLSAHCNMDQQSSFHCFGLFLGMQ--E-KGS--VSFAVDYEFAARSKPTEEFVSKYKGNYTFTG 340 (380)
Q Consensus 268 ~IY~~~~viG--G~~~~l~~~~~~~~~~~~~~~g~~~~~~--~-~~~--~~~~~~~~~~~r~~~~~~~~~~~~~~~~~tg 340 (380)
.|||..|.+| |+.|.+...-+-+........++++.+. + ++. -++.+.+.+..-+..... ..-...++.
T Consensus 99 ~i~S~~F~vg~~Gy~w~i~~yPnG~~~~~~~~lSlyL~l~~~~~d~~l~Wp~~a~~~l~lldq~~~~----~~~~~~~~~ 174 (228)
T 1flk_A 99 SLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSR----RHLGDAFKP 174 (228)
T ss_dssp CEECCCEESSTTSCEECEEEETTCCGGGTTTEEEEEECCBCCTTTTSSCSSCCCCEEEEECCCSSSC----CCEEEEECC
T ss_pred eEECceEEeCCCCcEEEEEEEcCCCCCCCCCEEEEEEEEecCCccccCCCcEEEEEEEEEEcCCCCc----cceeeeecC
Confidence 6999999999 8888765442222111223456676542 2 211 123344444444322110 001122322
Q ss_pred Cccc-cccc-----CCCCCCceeee----CCCceeecceeEEEeeeeec
Q 016908 341 GKAV-GYRN-----LFAIPWTSFMA----DDSLYFINGILHLRAELTIR 379 (380)
Q Consensus 341 ~~~~-~~~~-----~~~~~~~~~~~----~~~~~~~~~~~~l~~~~~~~ 379 (380)
..+. .+.. ..+--|+.||. .++.|-.||.|+++++++|.
T Consensus 175 ~~~~~~F~rp~~~~~~~wG~~~Fi~~~~L~~~gyL~dD~l~I~~~V~v~ 223 (228)
T 1flk_A 175 DPNSSSFKKPTGEMNIASGCPVFVAQTVLENGTYIKDDTIFIKVIVDTS 223 (228)
T ss_dssp CTTCTTSSSCSSSBCCCCSEEEEEEHHHHSSSTTCCSSEEEEEEECCCT
T ss_pred CCccccccCCccCCCCCcCHHHeeEHHHHccCCCccCCEEEEEEEEEcc
Confidence 1111 1110 11344666776 35678899999999999875
No 64
>4ghu_A TNF receptor-associated factor 3; alpha/beta, innate immunity, IFN pathway, immune system; 2.20A {Mus musculus} PDB: 2gkw_A 1kzz_A 1l0a_A 1zms_A 1rf3_A
Probab=83.71 E-value=1.9 Score=37.34 Aligned_cols=109 Identities=15% Similarity=0.194 Sum_probs=54.1
Q ss_pred CeEeeccceee--cCCcccccccccCCCCCceeeEEEEeeec---cC--ceeeEEeeeeeeccccccccccccceeEEee
Q 016908 267 GRVYSQAFHLG--GQGFFLSAHCNMDQQSSFHCFGLFLGMQE---KG--SVSFAVDYEFAARSKPTEEFVSKYKGNYTFT 339 (380)
Q Consensus 267 g~IY~~~~viG--G~~~~l~~~~~~~~~~~~~~~g~~~~~~~---~~--~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~t 339 (380)
..|+|..|.+| |+.|.+....+-+........++++.+.. |. +-++...+.+..-+..... ..-..+++
T Consensus 62 ~~i~S~~F~vg~~Gy~W~i~~yPnG~~~~~~~~lSlyL~l~~g~~D~~l~wp~~a~~~l~Lldq~~~~----~~~~~~~~ 137 (198)
T 4ghu_A 62 LSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSR----RHLGDAFK 137 (198)
T ss_dssp CCEECCCEESSTTSCEEEEEEETTCCGGGTTTEEEEEEEEECCTTGGGSCSSCCCCEEEEECCCSTTC----CCEEEEEC
T ss_pred cEEECCCeEECCCCcEEEEEEEeCCCCCCCCCeEEEEEEecCCccCCCCCceEEEEEEEEEEcCCCCc----cceEEEee
Confidence 57999999999 99887754432222112234556665431 11 1123333444443321110 11112222
Q ss_pred CCcc-cccccCC-----CCCCceeee----CCCceeecceeEEEeeeeec
Q 016908 340 GGKA-VGYRNLF-----AIPWTSFMA----DDSLYFINGILHLRAELTIR 379 (380)
Q Consensus 340 g~~~-~~~~~~~-----~~~~~~~~~----~~~~~~~~~~~~l~~~~~~~ 379 (380)
-.+. ..+..++ +--|+.||. .++.|-.||.+.++++++|.
T Consensus 138 ~~~~~~~f~rp~~~~~~~wG~~~Fi~~~~L~~~gyL~dD~l~I~~~V~v~ 187 (198)
T 4ghu_A 138 PDPNSSSFKKPTGEMNIASGCPVFVAQTVLENGTYIKDDTIFIKVIVDTS 187 (198)
T ss_dssp CCTTSGGGSCCSSSBCCCEEEEEEEEHHHHHHTTSCBTTBEEEEEEECCT
T ss_pred cCcccceecCCcccCcCCcCchhEeEHHHhhhcCCeeCCEEEEEEEEEec
Confidence 1110 0111111 233566776 24668899999999999886
No 65
>2gkw_A TNF receptor-associated factor 3; CD40, NF-KB signaling, BAFF receptor, TRAF3, apoptosis; 2.70A {Homo sapiens} PDB: 1kzz_A 1l0a_A 1zms_A 1rf3_A
Probab=81.74 E-value=2.3 Score=36.50 Aligned_cols=108 Identities=16% Similarity=0.217 Sum_probs=52.7
Q ss_pred eEeeccceee--cCCcccccccccCCCCCceeeEEEEeee--c-cCc--eeeEEeeeeeeccccccccccccceeEEeeC
Q 016908 268 RVYSQAFHLG--GQGFFLSAHCNMDQQSSFHCFGLFLGMQ--E-KGS--VSFAVDYEFAARSKPTEEFVSKYKGNYTFTG 340 (380)
Q Consensus 268 ~IY~~~~viG--G~~~~l~~~~~~~~~~~~~~~g~~~~~~--~-~~~--~~~~~~~~~~~r~~~~~~~~~~~~~~~~~tg 340 (380)
.|||..|.+| |+.|.+...-+-+........++++.+. + ++. -++.+.+.+..-+...... .-...++.
T Consensus 63 ~i~S~~F~vg~~Gykw~i~~yPnG~~~~~~~~lSlyL~l~~~~~d~~l~wp~~a~~~l~lldq~~~~~----~~~~~~~~ 138 (192)
T 2gkw_A 63 SLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSRR----HLGDAFKP 138 (192)
T ss_dssp CEECCCEESSTTSCEEEEEEETTCCGGGTTTEEEEEEEEECCTTGGGSCSSCCCCEEEEECCCSTTCC----CEEEEECC
T ss_pred eEEcccEEECCCCcEEEEEEEeCCCCCCCCCEEEEEEEEecCCCCccCCCcEEEEEEEEEECCCCCcc----ceEEEEec
Confidence 4999999999 8888765432222111223456666542 2 111 1233444444443221100 00112321
Q ss_pred Cccc-ccccC-----CCCCCceeee----CCCceeecceeEEEeeeeec
Q 016908 341 GKAV-GYRNL-----FAIPWTSFMA----DDSLYFINGILHLRAELTIR 379 (380)
Q Consensus 341 ~~~~-~~~~~-----~~~~~~~~~~----~~~~~~~~~~~~l~~~~~~~ 379 (380)
.... .+..+ .+--|+.||. .++.|-.||.|+++++++|.
T Consensus 139 ~~~~~~F~~~~~~~~~~wG~~~Fi~~~~L~~~gyl~dD~l~I~~~V~v~ 187 (192)
T 2gkw_A 139 DPNSSSFKKPTGEMNIASGCPVFVAQTVLENGTYIKDDTIFIKVIVDTS 187 (192)
T ss_dssp CTTCTTSSCCSSSBCCCEEEEEEEEHHHHHHTTSCBTTEEEEEEEECCT
T ss_pred CCCcccccCCCCCCcCCCChHHEeEHHHhCcCCCeeCCEEEEEEEEEcC
Confidence 1111 11000 1223556666 24568899999999999875
No 66
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=75.67 E-value=13 Score=33.38 Aligned_cols=94 Identities=6% Similarity=0.089 Sum_probs=64.0
Q ss_pred ecCCcchHHHHHHHHHHhchHhHHHHHHHHhhcCCC------------ChHhHHHHHHhccccccccchHHHHHHHHHHH
Q 016908 34 STTAAPALLDVLMAADKFEVASCMRYCSRLLRNMPM------------TPESALLYLELPSSVLMGEAVQPLTDAARQYL 101 (380)
Q Consensus 34 ~i~~~~~v~~ll~aA~~lqi~~l~~~C~~fL~~~~l------------~~~Ncl~i~~~a~~~~~~~~~~~L~~~a~~fi 101 (380)
.++. +|+..++..|+.++.+.|.+.|.+|+.+ +. +.+.-..++.--. + ....-.++.+++.+++
T Consensus 138 ~l~~-~n~~~i~~~A~~~~~~~L~~~~~~~i~~-~f~~v~~~~~f~~L~~~~l~~lL~~d~-L-~v~sE~~vf~av~~W~ 213 (279)
T 3i3n_A 138 KLHL-SNCVAIHSLAHMYTLSQLALKAADMIRR-NFHKVIQDEEFYTLPFHLIRDWLSDLE-I-TVDSEEVLFETVLKWV 213 (279)
T ss_dssp HCCT-TTHHHHHHHHHHTTCHHHHHHHHHHHHH-THHHHTTSSGGGGSCHHHHHHHHTCSS-C-CCSCHHHHHHHHHHHH
T ss_pred cCCc-chHHHHHHHHHHcCcHHHHHHHHHHHHH-HHHHHhcCcChhcCCHHHHHHHhcCcC-C-CCCCHHHHHHHHHHHH
Confidence 3565 8999999999999999999999999986 43 3333333332111 0 0112357888999998
Q ss_pred hcc-------cccccccchhhcccCHHHHHhhccCCCc
Q 016908 102 ASR-------YKDMTKFQDEVMALPLAGVEAILSSDDL 132 (380)
Q Consensus 102 ~~~-------f~~v~~~~~efl~L~~~~l~~lL~sd~L 132 (380)
..+ +.++.+ .--|..+|++.|...+..+.+
T Consensus 214 ~~~~~~r~~~~~~ll~-~VRf~l~~~~~L~~~v~~~~l 250 (279)
T 3i3n_A 214 QRNAEERERYFEELFK-LLRLSQMKPTYLTRHVKPERL 250 (279)
T ss_dssp HTTHHHHTTTHHHHHT-TSCGGGSCHHHHHHTTTTSHH
T ss_pred HcCHHHHHHHHHHHHH-hcCCCCCCHHHHHHHhhccch
Confidence 755 334444 456777888888887776655
No 67
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=74.74 E-value=3.2 Score=31.83 Aligned_cols=37 Identities=11% Similarity=0.116 Sum_probs=32.1
Q ss_pred CceecCCcchHHHHHHHHHHhchHhHHHHHHHHhhcCCC
Q 016908 31 NTLSTTAAPALLDVLMAADKFEVASCMRYCSRLLRNMPM 69 (380)
Q Consensus 31 g~i~i~~~~~v~~ll~aA~~lqi~~l~~~C~~fL~~~~l 69 (380)
+.-.++. +|...++..|+.++.+.|.+.|.+|+.+ +.
T Consensus 4 ~~~~L~~-~NCl~i~~~A~~~~~~~L~~~a~~fi~~-nF 40 (105)
T 2eqx_A 4 GSSGVQV-GNCLQVMWLADRHSDPELYTAAKHCAKT-HL 40 (105)
T ss_dssp CCCCCCT-TTHHHHHHHHHHTTCHHHHHHHHHHHHH-TC
T ss_pred hhccCCH-HHHHHHHHHHHHcCCHHHHHHHHHHHHH-HH
Confidence 3445665 9999999999999999999999999988 55
No 68
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=64.82 E-value=5.6 Score=32.77 Aligned_cols=33 Identities=9% Similarity=0.099 Sum_probs=30.1
Q ss_pred cCCcchHHHHHHHHHHhchHhHHHHHHHHhhcCCC
Q 016908 35 TTAAPALLDVLMAADKFEVASCMRYCSRLLRNMPM 69 (380)
Q Consensus 35 i~~~~~v~~ll~aA~~lqi~~l~~~C~~fL~~~~l 69 (380)
++. +|+..++..|+.++.+.|.+.|.+|+.+ +.
T Consensus 132 l~~-~n~~~~~~~A~~~~~~~L~~~~~~~i~~-~~ 164 (172)
T 3htm_A 132 LSV-ENAAEILILADLHSADQLKTQAVDFINY-HA 164 (172)
T ss_dssp CCT-TTHHHHHHHHHHTTCHHHHHHHHHHHHH-TC
T ss_pred CCH-HHHHHHHHHHHHhCcHHHHHHHHHHHHH-HH
Confidence 454 8999999999999999999999999998 55
No 69
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=62.46 E-value=4.6 Score=30.55 Aligned_cols=33 Identities=18% Similarity=0.256 Sum_probs=29.6
Q ss_pred CCChHhHHHHHHhccccccccchHHHHHHHHHHHhcc
Q 016908 68 PMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASR 104 (380)
Q Consensus 68 ~l~~~Ncl~i~~~a~~~~~~~~~~~L~~~a~~fi~~~ 104 (380)
.++.+|+..++.+|+. ++++.|.+.|.+|+.++
T Consensus 76 ~~~~~~~~~ll~~A~~----~~~~~L~~~c~~~l~~~ 108 (109)
T 2vkp_A 76 DLEADTVLATLYAAKK----YIVPALAKACVNFLETS 108 (109)
T ss_dssp CCCTTTHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHH----hCcHHHHHHHHHHHHhh
Confidence 5788999999999984 69999999999999875
No 70
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=54.74 E-value=14 Score=36.76 Aligned_cols=49 Identities=10% Similarity=0.072 Sum_probs=39.5
Q ss_pred cceEEEecCCCCHHHHHHHhHhHhc-CceecCCcchHHHHHHHHHHhchHhHH
Q 016908 6 QRHVALRINASEEAALMELLNFMYS-NTLSTTAAPALLDVLMAADKFEVASCM 57 (380)
Q Consensus 6 ~~~V~L~~~~v~~~~f~~lL~fiYt-g~i~i~~~~~v~~ll~aA~~lqi~~l~ 57 (380)
.+++-+ |=++..|+.||+|+.+ |++.+...-.+..+++-|++|++++..
T Consensus 92 ~~~~f~---DR~~~~F~~IL~~~r~~g~l~~p~~~~~~~~~~E~~f~~i~~~~ 141 (514)
T 2r9r_B 92 RNEYFF---DRNRPSFDAILYYYQSGGRLRRPVNVPLDIFSEEIRFYELGEEA 141 (514)
T ss_dssp TTEEEE---CSCHHHHHHHHHHHHHTSCCCCCTTSCHHHHHHHHHHTTCCHHH
T ss_pred CCCEEE---cCChHHHHHHHHHHhcCCccccCCcccHHHHHHHHHhcCCCHHH
Confidence 346666 6799999999999999 999875423567889999999997654
No 71
>1pd7_B MAD1; PAH2, SIN3, eukaryotic transcriptional regulation, protein-protein interactions; NMR {Mus musculus}
Probab=50.09 E-value=6.6 Score=21.97 Aligned_cols=14 Identities=36% Similarity=0.294 Sum_probs=12.6
Q ss_pred chHHHHHHHHHHhc
Q 016908 39 PALLDVLMAADKFE 52 (380)
Q Consensus 39 ~~v~~ll~aA~~lq 52 (380)
.||+.||+||.+|.
T Consensus 3 ~nvq~LLeAAeyLE 16 (26)
T 1pd7_B 3 MNIQMLLEAADYLE 16 (26)
T ss_dssp CSTHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHH
Confidence 58999999999986
No 72
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=47.92 E-value=13 Score=28.93 Aligned_cols=33 Identities=6% Similarity=0.213 Sum_probs=29.2
Q ss_pred CCChHhHHHHHHhccccccccchHHHHHHHHHHHhcc
Q 016908 68 PMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASR 104 (380)
Q Consensus 68 ~l~~~Ncl~i~~~a~~~~~~~~~~~L~~~a~~fi~~~ 104 (380)
.++.+|...++..|+. +++..|.+.|.+|+.++
T Consensus 94 ~~~~~~~~~ll~~A~~----~~i~~L~~~c~~~l~~~ 126 (127)
T 1r29_A 94 NLREGNIMAVMATAMY----LQMEHVVDTCRKFIKAS 126 (127)
T ss_dssp CCCTTTHHHHHHHHHH----TTCHHHHHHHHHHHHTC
T ss_pred CcCHHHHHHHHHHHHH----hCCHHHHHHHHHHHHhc
Confidence 5788999999999984 68999999999999764
No 73
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=46.38 E-value=7.3 Score=31.07 Aligned_cols=35 Identities=9% Similarity=0.097 Sum_probs=31.1
Q ss_pred CCChHhHHHHHHhccccccccchHHHHHHHHHHHhcccc
Q 016908 68 PMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASRYK 106 (380)
Q Consensus 68 ~l~~~Ncl~i~~~a~~~~~~~~~~~L~~~a~~fi~~~f~ 106 (380)
.++.+|...++..|+. +++..|.+.|.+||..++.
T Consensus 100 ~i~~~~v~~ll~~A~~----~~i~~L~~~C~~~l~~~l~ 134 (138)
T 2z8h_A 100 ILSKDNVDEVCRCVEF----LSVHNIEESCFQFLKFKFL 134 (138)
T ss_dssp CCCTTTHHHHHHHHHH----HTCGGGHHHHHHHTTCCCS
T ss_pred ccCHHHHHHHHHHHHH----hCCHHHHHHHHHHHHHhcc
Confidence 5788999999999984 6899999999999998775
No 74
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=44.88 E-value=7.9 Score=30.79 Aligned_cols=38 Identities=8% Similarity=0.012 Sum_probs=28.4
Q ss_pred CCChHhHHHHHHhccccccccchHHHHHHHHHHHhccccccc
Q 016908 68 PMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASRYKDMT 109 (380)
Q Consensus 68 ~l~~~Ncl~i~~~a~~~~~~~~~~~L~~~a~~fi~~~f~~v~ 109 (380)
.++.+|...++..|+. +++..|.+.|.+|+.+++..-.
T Consensus 86 ~i~~~~v~~ll~~A~~----l~i~~L~~~C~~~l~~~l~~~~ 123 (135)
T 2yy9_A 86 ALTSGNRDQVLLAAKE----LRVPEAVELCQSFQPQTSVGQA 123 (135)
T ss_dssp CCCTTTHHHHHHHHHH----TTCHHHHHHHHHCCC-------
T ss_pred CCCHHHHHHHHHHHHH----hCcHHHHHHHHHHHHHhccCCC
Confidence 5788999999999984 6899999999999998886543
No 75
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=38.58 E-value=19 Score=27.42 Aligned_cols=31 Identities=3% Similarity=-0.043 Sum_probs=27.7
Q ss_pred CCChHhHHHHHHhccccccccchHHHHHHHHHHHh
Q 016908 68 PMTPESALLYLELPSSVLMGEAVQPLTDAARQYLA 102 (380)
Q Consensus 68 ~l~~~Ncl~i~~~a~~~~~~~~~~~L~~~a~~fi~ 102 (380)
.++.+|...++..|+. ++++.|.+.|.+|+.
T Consensus 85 ~~~~~~v~~ll~~A~~----~~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 85 NLDSWNVKEIHQAADY----LKVEEVVTKCKIKME 115 (116)
T ss_dssp CCCTTTHHHHHHHHHH----TTCHHHHHHHHHHHC
T ss_pred ccCHHHHHHHHHHHHH----hCCHHHHHHHHHHHh
Confidence 5788999999999984 689999999999985
No 76
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=37.92 E-value=21 Score=27.42 Aligned_cols=31 Identities=16% Similarity=0.192 Sum_probs=27.7
Q ss_pred CCChHhHHHHHHhccccccccchHHHHHHHHHHHh
Q 016908 68 PMTPESALLYLELPSSVLMGEAVQPLTDAARQYLA 102 (380)
Q Consensus 68 ~l~~~Ncl~i~~~a~~~~~~~~~~~L~~~a~~fi~ 102 (380)
.++.+|...++..|+. ++++.|.+.|.+|+.
T Consensus 87 ~i~~~~~~~ll~~A~~----l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 87 SLSPENVDDVLAVATF----LQMQDIITACHALKS 117 (119)
T ss_dssp CCCTTTHHHHHHHHHH----TTCHHHHHHHHHHHT
T ss_pred ccCHHHHHHHHHHHHH----hCCHHHHHHHHHHHh
Confidence 5788999999999984 689999999999985
No 77
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=36.92 E-value=14 Score=28.53 Aligned_cols=33 Identities=9% Similarity=0.044 Sum_probs=27.1
Q ss_pred CCChHhHHHHHHhccccccccchHHHHHHHHHHHhcc
Q 016908 68 PMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASR 104 (380)
Q Consensus 68 ~l~~~Ncl~i~~~a~~~~~~~~~~~L~~~a~~fi~~~ 104 (380)
.++.+|...++..|+. ++++.|.+.|.+|+.++
T Consensus 85 ~~~~~~v~~ll~~A~~----~~i~~L~~~C~~~l~~~ 117 (119)
T 3b84_A 85 ALTSGNRDQVLLAARE----LRVPEAVELCQSFKPKT 117 (119)
T ss_dssp CCCTTTHHHHHHHHHH----TTCHHHHHHHHHCC---
T ss_pred ccCHHHHHHHHHHHHH----hCcHHHHHHHHHHHHHc
Confidence 5788999999999984 68999999999998765
No 78
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=33.89 E-value=30 Score=26.54 Aligned_cols=32 Identities=13% Similarity=0.040 Sum_probs=28.3
Q ss_pred CCChHhHHHHHHhccccccccchHHHHHHHHHHHhc
Q 016908 68 PMTPESALLYLELPSSVLMGEAVQPLTDAARQYLAS 103 (380)
Q Consensus 68 ~l~~~Ncl~i~~~a~~~~~~~~~~~L~~~a~~fi~~ 103 (380)
.++.+|...++..|+. ++++.|.+.|.+|+.+
T Consensus 88 ~~~~~~~~~ll~~A~~----~~i~~L~~~c~~~l~~ 119 (121)
T 1buo_A 88 QAKAEDLDDLLYAAEI----LEIEYLEEQCLKMLET 119 (121)
T ss_dssp CCCGGGHHHHHHHHHH----HTCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH----HCCHHHHHHHHHHHHH
Confidence 5788999999999984 6899999999999865
No 79
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=30.96 E-value=37 Score=25.80 Aligned_cols=30 Identities=7% Similarity=0.060 Sum_probs=26.8
Q ss_pred CCChHhHHHHHHhccccccccchHHHHHHHHHHH
Q 016908 68 PMTPESALLYLELPSSVLMGEAVQPLTDAARQYL 101 (380)
Q Consensus 68 ~l~~~Ncl~i~~~a~~~~~~~~~~~L~~~a~~fi 101 (380)
.++.+|...++..|+. ++++.|.+.|.+|+
T Consensus 90 ~~~~~~~~~ll~~A~~----~~i~~L~~~C~~~L 119 (120)
T 2if5_A 90 TVSTANVGDILSAARL----LEIPAVSHVCADLL 119 (120)
T ss_dssp CCCGGGHHHHHHHHHH----TTCHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHH----hCCHHHHHHHHHHh
Confidence 5788999999999984 68999999999987
No 80
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=27.01 E-value=1.6e+02 Score=23.83 Aligned_cols=47 Identities=9% Similarity=0.071 Sum_probs=36.6
Q ss_pred CCChHhHHHHHHhccccccccchHHHHHHHHHHHhcccccccccchhhcccCHHHHHhhcc
Q 016908 68 PMTPESALLYLELPSSVLMGEAVQPLTDAARQYLASRYKDMTKFQDEVMALPLAGVEAILS 128 (380)
Q Consensus 68 ~l~~~Ncl~i~~~a~~~~~~~~~~~L~~~a~~fi~~~f~~v~~~~~efl~L~~~~l~~lL~ 128 (380)
.++.+|++.++..|.. .++..|.+.|-+|++.... .-+++++..++.
T Consensus 93 ~id~~~l~eLl~AAny----L~I~~Lld~~c~~va~~i~----------gkt~eeir~~f~ 139 (159)
T 2ast_A 93 KVDQGTLFELILAANY----LDIKGLLDVTCKTVANMIK----------GKTPEEIRKTFN 139 (159)
T ss_dssp CSCHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHHS----------SCCHHHHHHHTT
T ss_pred cCCHHHHHHHHHHHHH----HhHHHHHHHHHHHHHHHHc----------CCCHHHHHHHcC
Confidence 4899999999988863 4789999999999976444 345677777766
No 81
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=27.01 E-value=39 Score=29.67 Aligned_cols=31 Identities=10% Similarity=0.053 Sum_probs=28.5
Q ss_pred cCCcchHHHHHHHHHHhchHhHHHHHHHHhhc
Q 016908 35 TTAAPALLDVLMAADKFEVASCMRYCSRLLRN 66 (380)
Q Consensus 35 i~~~~~v~~ll~aA~~lqi~~l~~~C~~fL~~ 66 (380)
++. +|+..++..|+.++.+.|.+.|.+|+.+
T Consensus 131 l~~-~n~~~i~~~A~~~~~~~L~~~~~~~i~~ 161 (256)
T 3hve_A 131 IAA-ENCIGIRDFALHYCLHHVHYLATEYLET 161 (256)
T ss_dssp CCS-STTHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CCH-hhHHHHHHHHHHcCcHHHHHHHHHHHHH
Confidence 554 8999999999999999999999999987
No 82
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=22.55 E-value=31 Score=27.60 Aligned_cols=30 Identities=7% Similarity=0.099 Sum_probs=26.3
Q ss_pred CCChHhHHHHHHhccccccccchHHHHHHHHHHH
Q 016908 68 PMTPESALLYLELPSSVLMGEAVQPLTDAARQYL 101 (380)
Q Consensus 68 ~l~~~Ncl~i~~~a~~~~~~~~~~~L~~~a~~fi 101 (380)
.++.+|...++.+|+. +++..|.+.|.+||
T Consensus 114 ~i~~~~v~~ll~~A~~----l~i~~L~~~C~~~L 143 (144)
T 2ppi_A 114 RLNEDTIQDVVQAADL----LLLTDLKTLCCEFL 143 (144)
T ss_dssp CCCTTTHHHHHHHHHH----TTCHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHH----hCcHHHHHHHHHHh
Confidence 5788999999999984 68999999998876
No 83
>2lky_A Uncharacterized protein; infectious disease, tuberculosis, DUF proteins, ssgcid, STRU genomics; NMR {Mycobacterium smegmatis str}
Probab=20.75 E-value=95 Score=24.03 Aligned_cols=44 Identities=18% Similarity=0.329 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHhhCCChHHHHHHHHHHhcccccCCCCCHHHHHhhhc
Q 016908 139 AVYDFVLKWARAQYPRVEERREVLGSRLARFIRFPHMTCRKLKKVLT 185 (380)
Q Consensus 139 ~v~~~v~~Wi~~d~~~~~~R~~~l~~~Ll~~VRf~~l~~~~L~~~~~ 185 (380)
..+..++.|++.-||+---...++ .||..+| ..|+.+++.+++.
T Consensus 8 ~~l~siv~WLRAGYP~GVP~~Dy~--PLLALL~-r~Ltdeev~~Va~ 51 (112)
T 2lky_A 8 AFLAKIAAWLNAGYPEGVPGPDRV--PLLALLT-RRLTNDEIKAIAE 51 (112)
T ss_dssp HHHHHHHHHHHHHCSSCCCHHHHH--HHHHHHT-TTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHccCCCCCCCcchH--HHHHHHc-ccCCHHHHHHHHH
Confidence 468899999999987432233333 4555555 5688888877543
Done!