Query 016916
Match_columns 380
No_of_seqs 159 out of 1247
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 05:55:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016916.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016916hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vla_A EDGP; extracellular, in 100.0 9.4E-55 3.2E-59 428.3 25.4 329 33-378 5-379 (413)
2 3aup_A SBG7S, BG, basic 7S glo 100.0 1.1E-49 3.8E-54 391.7 29.3 317 35-378 8-366 (403)
3 1t6e_X Xylanase inhibitor; two 100.0 1E-49 3.4E-54 389.3 23.3 319 36-378 2-353 (381)
4 2apr_A Rhizopuspepsin; hydrola 100.0 2.7E-49 9.2E-54 378.3 23.7 285 37-377 6-303 (325)
5 3psg_A Pepsinogen; hydrolase(a 100.0 1.5E-49 5E-54 386.3 20.0 289 37-377 46-349 (370)
6 1am5_A Pepsin, acid proteinase 100.0 6.4E-49 2.2E-53 375.6 22.7 286 37-377 2-303 (324)
7 2x0b_A Renin; hydrolase-hormon 100.0 1.3E-49 4.4E-54 387.8 18.1 288 36-377 50-362 (383)
8 3c9x_A Trichoderma reesei aspa 100.0 8.8E-49 3E-53 375.4 21.7 282 46-377 12-309 (329)
9 1dpj_A Proteinase A; proteinas 100.0 1.3E-48 4.6E-53 374.1 22.0 286 38-377 4-308 (329)
10 1oew_A Endothiapepsin; hydrola 100.0 1.7E-48 5.9E-53 373.4 20.9 280 47-377 13-308 (329)
11 1tzs_A Cathepsin E; hydrolase, 100.0 4.1E-48 1.4E-52 373.9 23.0 288 37-377 13-321 (351)
12 1mpp_A Pepsin; hydrolase(acid 100.0 7E-48 2.4E-52 373.7 24.5 296 33-377 4-334 (361)
13 1htr_B Gastricsin; aspartyl pr 100.0 9.1E-49 3.1E-53 375.3 16.7 284 39-377 5-308 (329)
14 3cms_A Chymosin B; hydrolase, 100.0 2.1E-48 7.3E-53 371.8 17.8 284 37-377 4-302 (323)
15 1j71_A Candidapepsin, aspartic 100.0 6.2E-48 2.1E-52 370.3 20.0 278 36-377 2-303 (334)
16 4aa9_A Chymosin; hydrolase, as 100.0 2.6E-48 9E-53 370.7 16.3 284 39-377 3-299 (320)
17 2qzx_A Candidapepsin-5; aspart 100.0 2.5E-47 8.7E-52 367.2 20.5 281 36-377 2-310 (342)
18 1ibq_A Aspergillopepsin; aspar 100.0 5.8E-47 2E-51 362.1 22.0 277 47-377 12-304 (325)
19 1miq_A Plasmepsin; aspartic pr 100.0 1.1E-47 3.8E-52 373.7 17.0 281 38-377 53-353 (375)
20 1izd_A Aspartic proteinase; su 100.0 2.2E-47 7.6E-52 364.7 18.3 284 35-377 5-302 (323)
21 3k1w_A Renin; protease, altern 100.0 1.9E-47 6.4E-52 367.9 17.9 290 34-377 5-319 (341)
22 3fv3_A SAPP1P-secreted asparti 100.0 2.1E-46 7.2E-51 360.3 23.7 280 36-377 2-308 (339)
23 3pvk_A Candidapepsin-2; hydrol 100.0 1E-46 3.4E-51 362.9 20.1 281 36-377 2-310 (342)
24 1bxo_A Protein (penicillopepsi 100.0 5.6E-47 1.9E-51 361.9 17.2 284 34-377 4-302 (323)
25 2bju_A Plasmepsin II; aspartic 100.0 1.1E-46 3.8E-51 373.3 17.7 283 37-377 128-429 (453)
26 1yg9_A Aspartic protease BLA G 100.0 1.1E-46 3.9E-51 360.8 15.7 284 37-377 7-308 (330)
27 1qdm_A Prophytepsin; aspartic 100.0 8.3E-46 2.8E-50 370.4 22.3 220 38-287 43-281 (478)
28 2ewy_A Beta-secretase 2; BACE2 100.0 2.6E-45 9E-50 358.4 22.3 289 48-377 12-334 (383)
29 3qvc_A Histo-aspartic protease 100.0 5.4E-46 1.9E-50 368.7 16.8 281 38-377 128-428 (451)
30 3vf3_A Beta-secretase 1; struc 100.0 1.5E-44 5.2E-49 355.1 24.9 293 48-378 27-354 (402)
31 2qp8_A Beta-secretase 1; BACE1 100.0 8.9E-45 3E-49 356.0 22.7 290 48-377 20-346 (395)
32 3lpj_A Beta-secretase 1; alzhe 100.0 6.5E-45 2.2E-49 363.2 21.3 293 48-378 73-400 (455)
33 1wkr_A Polyporopepsin; hydrola 100.0 8.7E-44 3E-48 342.2 22.1 275 38-377 4-312 (340)
34 1b5f_A Protein (cardosin A); h 100.0 9.5E-42 3.2E-46 312.1 16.1 219 38-286 4-237 (239)
35 1lya_B Cathepsin D; lysosomal 100.0 9.8E-30 3.3E-34 232.6 13.7 200 154-377 2-220 (241)
36 1lya_A Cathepsin D; lysosomal 99.8 1.1E-20 3.6E-25 147.5 9.0 88 38-149 4-95 (97)
37 1b5f_B Protein (cardosin A); h 98.1 1.9E-06 6.5E-11 65.0 4.3 52 322-377 12-66 (87)
38 2i1a_A DNA damage-inducible pr 79.5 1.7 5.6E-05 35.2 4.0 30 48-79 24-53 (148)
39 1fmb_A EIAV protease; hydrolas 79.1 2 6.9E-05 32.8 4.0 25 52-78 10-34 (104)
40 2hs1_A HIV-1 protease; ultra-h 78.7 2.2 7.5E-05 32.2 4.1 27 52-80 10-36 (99)
41 3ec0_A Protease; HIV-2, inhibi 74.0 3.3 0.00011 31.3 3.9 27 52-80 10-36 (99)
42 3liy_A Protease; hydrolase, hy 71.6 4 0.00014 31.5 3.9 29 52-80 12-43 (116)
43 3s8i_A Protein DDI1 homolog 1; 69.8 3.8 0.00013 33.3 3.7 30 49-80 23-52 (148)
44 2hah_A Protease, retropepsin; 65.8 5.8 0.0002 30.8 3.8 24 55-80 18-41 (116)
45 2i1a_A DNA damage-inducible pr 65.5 7.8 0.00027 31.0 4.8 29 247-280 30-58 (148)
46 3s8i_A Protein DDI1 homolog 1; 62.3 8.1 0.00028 31.3 4.3 30 247-281 28-57 (148)
47 3sqf_A Protease; folded monome 60.8 9.1 0.00031 29.6 4.0 27 52-80 11-37 (114)
48 3slz_A GAG-Pro-POL polyprotein 53.7 12 0.00042 29.6 3.9 29 50-80 22-50 (132)
49 3ka2_A [L-Ala51;Gly51']HIV-1 p 46.8 17 0.00058 31.1 3.9 28 51-80 9-36 (203)
50 2rsp_A RSV protease; hydrolase 40.5 22 0.00076 27.8 3.3 22 57-80 27-48 (124)
51 2hs1_A HIV-1 protease; ultra-h 34.8 34 0.0012 25.6 3.4 32 239-275 4-35 (99)
52 1b5f_A Protein (cardosin A); h 34.5 45 0.0015 28.8 4.9 41 36-80 179-227 (239)
53 1fmb_A EIAV protease; hydrolas 33.5 39 0.0013 25.5 3.7 35 239-278 4-38 (104)
54 1mpp_A Pepsin; hydrolase(acid 30.8 60 0.0021 29.8 5.4 44 225-276 4-49 (361)
55 3ec0_A Protease; HIV-2, inhibi 29.8 45 0.0015 24.9 3.4 31 239-274 4-34 (99)
56 2hah_A Protease, retropepsin; 29.1 50 0.0017 25.4 3.7 31 239-275 10-40 (116)
57 3cms_A Chymosin B; hydrolase, 28.8 65 0.0022 29.1 5.1 42 227-276 2-45 (323)
58 3ka2_A [L-Ala51;Gly51']HIV-1 p 26.1 58 0.002 27.7 3.9 27 52-80 114-140 (203)
59 1lya_B Cathepsin D; lysosomal 25.2 61 0.0021 27.8 4.1 41 36-80 90-137 (241)
60 1bxo_A Protein (penicillopepsi 24.2 1.1E+02 0.0038 27.5 5.8 44 34-80 177-224 (323)
61 2apr_A Rhizopuspepsin; hydrola 23.9 91 0.0031 28.1 5.1 44 34-80 181-229 (325)
62 1izd_A Aspartic proteinase; su 23.8 76 0.0026 28.7 4.6 43 226-278 4-46 (323)
63 1oew_A Endothiapepsin; hydrola 23.2 1.2E+02 0.0041 27.4 5.8 43 35-80 181-229 (329)
64 3c9x_A Trichoderma reesei aspa 23.2 1.1E+02 0.0037 27.7 5.5 44 34-80 181-230 (329)
65 1ibq_A Aspergillopepsin; aspar 21.9 1.3E+02 0.0043 27.2 5.7 43 35-80 177-225 (325)
66 1qdm_A Prophytepsin; aspartic 20.4 1E+02 0.0034 29.8 4.9 52 322-377 402-457 (478)
67 3aup_A SBG7S, BG, basic 7S glo 20.3 1.1E+02 0.0039 28.5 5.2 44 35-80 216-276 (403)
68 1j71_A Candidapepsin, aspartic 20.2 1.1E+02 0.0037 27.7 4.9 37 231-276 5-43 (334)
No 1
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=9.4e-55 Score=428.26 Aligned_cols=329 Identities=22% Similarity=0.363 Sum_probs=260.2
Q ss_pred CCCeEEEEEecCCCCCeeEEEEEEecCCCcEEEEEEEcCCCceEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCcC
Q 016916 33 VGSSLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLH 112 (380)
Q Consensus 33 ~~~~~~lpl~~~~~~~~~y~~~i~vGtP~Q~~~v~~DTGSs~~wv~~~~~c~~C~~~~~~~f~p~~S~~~c~~~~c~~~~ 112 (380)
+++.+.+|++++. .+++|+++|+||||||++.|+|||||+++||+|. +|. ....|. .++|.++.|...+
T Consensus 5 ~~~~~~~pv~~d~-~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~-~c~-----~Sst~~----~v~C~s~~C~~~~ 73 (413)
T 3vla_A 5 RPSALVVPVKKDA-STLQYVTTINQRTPLVSENLVVDLGGRFLWVDCD-QNY-----VSSTYR----PVRCRTSQCSLSG 73 (413)
T ss_dssp CCSEEEEEEEECT-TTCCEEEEEEETTTTEEEEEEEETTCSSEEEECS-SSC-----CCTTCE----ECBTTSHHHHHTT
T ss_pred CCccEEEEeeecC-CCCeEEEEEEcCCCCcceEEEEeCCChhhhcccC-CCC-----CCCCcC----ccCCCcccccccc
Confidence 4677999999885 7899999999999999999999999999999988 652 122333 3899999999776
Q ss_pred CCCCC--------CCCCCCCCceeEEe-CCCCeEEEEEEEEEEEEeecCCC-----cCCCceEEeeeEecCCCCCCCCcc
Q 016916 113 APGHH--------NCEDPAQCDYELEY-ADGGSSLGVLVKDAFAFNYTNGQ-----RLNPRLALGCGYNQVPGASYHPLD 178 (380)
Q Consensus 113 ~~~~~--------~c~~~~~~~~~i~Y-~~Gs~~~G~l~~D~v~l~~~~g~-----~~~~~~~FG~~~~~~~~~~~~~~~ 178 (380)
.+.+. .|. ++.|.|.+.| ++|+.+.|.+++|+|+|+..+|. ..++++.|||++.+.........+
T Consensus 74 ~~~~~~c~s~~~~~c~-~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g~~~~~d 152 (413)
T 3vla_A 74 SIACGDCFNGPRPGCN-NNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNLASGVV 152 (413)
T ss_dssp CCEEECCSSCCBTTBC-SSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTTSCTTCC
T ss_pred cCCCcccccCCCCCCC-CCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccCcccccc
Confidence 54332 233 3579999999 58878999999999999865443 467889999998752111245689
Q ss_pred eEEeeCCCCCchhhhccccccccceeeeeecC--CCceeEEECCCCC-------CCCC-cEEeecccCCC----------
Q 016916 179 GILGLGKGKSSIVSQLHSQKLIRNVVGHCLSG--GGGGFLFFGDDLY-------DSSR-VVWTSMSSDYT---------- 238 (380)
Q Consensus 179 GIlGLg~~~~s~~~~l~~~g~i~~~Fs~~l~~--~~~G~l~~G~~~~-------~~g~-l~~~pl~~~~~---------- 238 (380)
||||||++.+|++.||.+++.++++||+||.+ +.+|.|+||+.+. +.++ +.|+||..++.
T Consensus 153 GIlGLg~~~lSl~sql~~~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~~~ 232 (413)
T 3vla_A 153 GMAGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGE 232 (413)
T ss_dssp EEEECSSSSSSHHHHHHHHHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCTTC
T ss_pred cccccCCCCcchHHHHhhhcCCCceEEEeCCCCCCCceEEEECCCcccccccccccCCceeEeecccCCccccccccccC
Confidence 99999999999999999998889999999985 4689999999864 3567 99999998631
Q ss_pred --CCeeEEeeEEEECCEEeeeC----------CCCEEEcccccceeeCHHHHHHHHHHHHHHhccCCCccCCCCCCcCcc
Q 016916 239 --KYYSPGVAELFFGGETTGLK----------NLPVVFDSGSSYTYLNRVTYQTLTSIMKKELSAKSLKEAPEDETLPLC 306 (380)
Q Consensus 239 --~~w~v~l~~i~vg~~~~~~~----------~~~aiiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C 306 (380)
.+|+|.|++|+||++.+.++ ...+||||||++++||+++|++|.++|.+++...++++......+..|
T Consensus 233 ~~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~~~~~~~~~C 312 (413)
T 3vla_A 233 PSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRVASVAPFGAC 312 (413)
T ss_dssp CCCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEECCCTTCSCE
T ss_pred CCceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcCCCCCCCcce
Confidence 59999999999999998764 368999999999999999999999999988753223333233456789
Q ss_pred cccccCCccccccccccceEEEEEecCCCCeEEEEcCCeEEEEeCCCeEEEEEEeCCcCCCCCeeEEccccc
Q 016916 307 WKGRRPFKNVHDVKKCFRTLALSFTDGKTRTLFELTPEAYLIISNKGNVCLGILNGAEVGLQDLNVIGGIGD 378 (380)
Q Consensus 307 ~~~~~~~~~~~~~~~~~P~l~f~f~g~~~~~~~~l~~~~y~~~~~~~~~C~~~~~~~~~~~~~~~IlG~~~~ 378 (380)
|+...... ..++..+|+|+|+|+|+ +++|+|++++|+++..++..|++++..... ....||||++++
T Consensus 313 ~~~~~~~~--~~~~~~lP~i~f~f~g~--~~~~~l~~~~y~~~~~~~~~Cl~~~~~~~~-~~~~~IlGd~fl 379 (413)
T 3vla_A 313 FSTDNILS--TRLGPSVPSIDLVLQSE--SVVWTITGSNSMVYINDNVVCLGVVDGGSN-LRTSIVIGGHQL 379 (413)
T ss_dssp EECTTCCE--ETTEECCCCEEEECSST--TCEEEECHHHHEEEEETTEEEECEEEEESS-CSSSEEECHHHH
T ss_pred eccCCccc--cccccCCCcEEEEEcCC--cEEEEeCccceEEEeCCCcEEEEEEecCCC-cccceeEehhhh
Confidence 98653110 01224699999999962 389999999999987667899998875421 235899999875
No 2
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=1.1e-49 Score=391.74 Aligned_cols=317 Identities=18% Similarity=0.340 Sum_probs=242.7
Q ss_pred CeEEEEEecCCCCCeeEEEEEEecCCCcEEEEEEEcCCCceEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCcCCC
Q 016916 35 SSLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAP 114 (380)
Q Consensus 35 ~~~~lpl~~~~~~~~~y~~~i~vGtP~Q~~~v~~DTGSs~~wv~~~~~c~~C~~~~~~~f~p~~S~~~c~~~~c~~~~~~ 114 (380)
+.+.+||+++. .+++|+++|.||||||++.|+|||||+++||+|. +|. ....|. .+.|.+..|...+.+
T Consensus 8 ~~~~~pl~~~~-~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~-~~~-----~Sst~~----~~~C~s~~C~~~~~~ 76 (403)
T 3aup_A 8 NLVVLPVQNDG-STGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCE-QQY-----SSKTYQ----APFCHSTQCSRANTH 76 (403)
T ss_dssp CCEEEEEEECT-TTCCEEEEEEETTTTEEEEEEEETTCSSEEEECS-SCC-----CCSSCB----CCCTTBHHHHHTTCC
T ss_pred ccEEEeeecCC-CCceEEEEEECCCCCceeEEEEECCCCceeECCC-CCC-----CCCCCC----ccCCCCccccCcccc
Confidence 45789999653 6789999999999999999999999999999988 552 122333 378999999876654
Q ss_pred C--------CCCCCCCCCCceeEEeC-CCCeEEEEEEEEEEEEeecCCC-------cCCCceEEeeeEecCCC-CCCCCc
Q 016916 115 G--------HHNCEDPAQCDYELEYA-DGGSSLGVLVKDAFAFNYTNGQ-------RLNPRLALGCGYNQVPG-ASYHPL 177 (380)
Q Consensus 115 ~--------~~~c~~~~~~~~~i~Y~-~Gs~~~G~l~~D~v~l~~~~g~-------~~~~~~~FG~~~~~~~~-~~~~~~ 177 (380)
. ...|. .+.|.|.+.|+ +|+.+.|.+++|+|+|++.+|. ..++++.|||++..... +.....
T Consensus 77 ~c~~c~~~~~s~~~-~~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~~~~~~~~~ 155 (403)
T 3aup_A 77 QCLSCPAASRPGCH-KNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGLPRNT 155 (403)
T ss_dssp CEEECSSSCBTTBC-SSEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGGSSSSSTTC
T ss_pred CccccCCCCCCCCC-CCcceeEeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEECCcccccccCCCCCC
Confidence 2 12343 25799999998 7779999999999999864332 46788999999876322 334578
Q ss_pred ceEEeeCCCCCchhhhccccccccceeeeeecC--CCceeEEECCCCC--C--C-C-----CcEEeecccCCCCCeeEEe
Q 016916 178 DGILGLGKGKSSIVSQLHSQKLIRNVVGHCLSG--GGGGFLFFGDDLY--D--S-S-----RVVWTSMSSDYTKYYSPGV 245 (380)
Q Consensus 178 ~GIlGLg~~~~s~~~~l~~~g~i~~~Fs~~l~~--~~~G~l~~G~~~~--~--~-g-----~l~~~pl~~~~~~~w~v~l 245 (380)
+||||||+..++++.||++..+.+++||+||.+ ...|.|+||+ ++ + . | ++.|+|+...+..+|.|.|
T Consensus 156 dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~~~~~G~l~fGg-d~~~~~~~~G~~~~~~l~~~Pl~~~~~~~y~v~l 234 (403)
T 3aup_A 156 QGVAGLGHAPISLPNQLASHFGLQRQFTTCLSRYPTSKGAIIFGD-APNNMRQFQNQDIFHDLAFTPLTITLQGEYNVRV 234 (403)
T ss_dssp CEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSCTTSCEEEEESC-HHHHC--CTTCCTTTTEEEEECEECTTSCEEECE
T ss_pred ceEEECCCCCcCHHHHHHhhcCCCCeEEEEcCCCCCCCeeEEECC-CchhccccccccccCceeecccccCCCCcceEEE
Confidence 999999999999999996544348999999986 5789999999 53 3 3 4 9999999987447999999
Q ss_pred eEEEECCEEe-eeCC----------CCEEEcccccceeeCHHHHHHHHHHHHHHhccCCCccCCCCCCcCcccccccCCc
Q 016916 246 AELFFGGETT-GLKN----------LPVVFDSGSSYTYLNRVTYQTLTSIMKKELSAKSLKEAPEDETLPLCWKGRRPFK 314 (380)
Q Consensus 246 ~~i~vg~~~~-~~~~----------~~aiiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~ 314 (380)
++|+|+++.+ .++. ..+||||||++++||+++|++|.++|.+++... .++.....+..|+...
T Consensus 235 ~~i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~~~--~~~~~~~~~~~c~~c~---- 308 (403)
T 3aup_A 235 NSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQ--AQVKSVAPFGLCFNSN---- 308 (403)
T ss_dssp EEEEETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSCGG--GEECCCTTCSCEECGG----
T ss_pred EEEEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhccc--cccCCCCCCCceEECC----
Confidence 9999999988 5432 359999999999999999999999998776432 1211112334576532
Q ss_pred cccccccccceEEEEEecCCCC--eEEEEcCCeEEEEeCCCeEEEEEEeCCcCCCCCeeEEccccc
Q 016916 315 NVHDVKKCFRTLALSFTDGKTR--TLFELTPEAYLIISNKGNVCLGILNGAEVGLQDLNVIGGIGD 378 (380)
Q Consensus 315 ~~~~~~~~~P~l~f~f~g~~~~--~~~~l~~~~y~~~~~~~~~C~~~~~~~~~~~~~~~IlG~~~~ 378 (380)
.+ ..+|+|+|+|+| + ++|+|++++|+++..++..|++++..... ....||||+++.
T Consensus 309 ---~~-~~~P~i~f~f~g---~~~~~~~l~~~~y~~~~~~~~~C~~~~~~~~~-~~~~~ILG~~fl 366 (403)
T 3aup_A 309 ---KI-NAYPSVDLVMDK---PNGPVWRISGEDLMVQAQPGVTCLGVMNGGMQ-PRAEITLGARQL 366 (403)
T ss_dssp ---GC-CCCCCEEEEESS---TTCCEEEECHHHHEEEC---CEEECEEECCSC-CSSSEEECHHHH
T ss_pred ---Cc-CcCCcEEEEEcC---CCceEEEEcccceEEEcCCCeEEEEEEcCCCC-CCCcEEEChHHh
Confidence 11 368999999997 4 69999999999987656789988876531 135799999863
No 3
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=1e-49 Score=389.32 Aligned_cols=319 Identities=19% Similarity=0.329 Sum_probs=242.2
Q ss_pred eEEEEEecCCCCCeeEEEEEEecCCCcEEEEEEEcCCCceEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCcCCCC
Q 016916 36 SLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAPG 115 (380)
Q Consensus 36 ~~~lpl~~~~~~~~~y~~~i~vGtP~Q~~~v~~DTGSs~~wv~~~~~c~~C~~~~~~~f~p~~S~~~c~~~~c~~~~~~~ 115 (380)
.+.+||..+ +.+.+|+++|+|||| |+|||||+++||+|. +|. .|. .++|.++.|+..+.+.
T Consensus 2 ~~~~pv~~~-~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~-~~~--------~~~----~~~C~s~~C~~~~~~~ 62 (381)
T 1t6e_X 2 PVLAPVTKD-PATSLYTIPFHDGAS-----LVLDVAGPLVWSTCD-GGQ--------PPA----EIPCSSPTCLLANAYP 62 (381)
T ss_dssp CEEEEEEEC-TTTCCEEEEEETTEE-----EEEETTCCCEEECCC-TTC--------CCC----CCBTTSHHHHHHHSSC
T ss_pred ceEEeEEec-CCCcEEEEEEeCCCE-----EEEECCCCceEEeCC-CCC--------CCC----ccCCCCchhccccCCC
Confidence 478999865 468899999999998 999999999999987 542 132 3789888898655443
Q ss_pred CCCCCC--------CCCC-ceeEEeCCCCeEEEEEEEEEEEEeecCCCcCCCce----EEeeeEecCCCCCCCCcceEEe
Q 016916 116 HHNCED--------PAQC-DYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRL----ALGCGYNQVPGASYHPLDGILG 182 (380)
Q Consensus 116 ~~~c~~--------~~~~-~~~i~Y~~Gs~~~G~l~~D~v~l~~~~g~~~~~~~----~FG~~~~~~~~~~~~~~~GIlG 182 (380)
..+|.. +..| .|.+.|++|+.+.|.+++|+|+|+..+|...++++ .|||++.+.........+||||
T Consensus 63 ~~sc~~~~~~~~~~~~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g~~~v~~~~~~~~Fg~~~~~~~~~~~~~~dGIlG 142 (381)
T 1t6e_X 63 APGCPAPSCGSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLASLPRGSTGVAG 142 (381)
T ss_dssp CTTCCCCCC------CBCEECCBCTTTCCBCCEEEEEEEEEEEEESSSSEEEEEEEEEEEEECCGGGGTTSCTTEEEEEE
T ss_pred CCCCCCccCCcCcCCCccccccccccCCceeeEEEEEEEEEeeccCCCccccceeeeeEeecCcccccCCCCCCCceEEE
Confidence 445643 2356 59999999977799999999999864443444554 6799987521111467899999
Q ss_pred eCCCCCchhhhccccccccceeeeeecCCCceeEEECCCCC----CCCCcEEeecccCCC-CCeeEEeeEEEECCEEeee
Q 016916 183 LGKGKSSIVSQLHSQKLIRNVVGHCLSGGGGGFLFFGDDLY----DSSRVVWTSMSSDYT-KYYSPGVAELFFGGETTGL 257 (380)
Q Consensus 183 Lg~~~~s~~~~l~~~g~i~~~Fs~~l~~~~~G~l~~G~~~~----~~g~l~~~pl~~~~~-~~w~v~l~~i~vg~~~~~~ 257 (380)
||+..++++.||+++++++++||+||.+...|+|+||+++. +.+++.|+|+...+. .+|.|.|++|+||++.+.+
T Consensus 143 Lg~~~~s~~~ql~~~~~~~~~FS~~L~~~~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~~~y~v~l~~i~vg~~~~~~ 222 (381)
T 1t6e_X 143 LANSGLALPAQVASAQKVANRFLLCLPTGGPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRVPV 222 (381)
T ss_dssp CSSSTTSHHHHHHHHHTCCSEEEEECCSSSCEEEEESCCSCSCHHHHTTCCEEECBCCTTCCSCEECEEEEEETTEECCC
T ss_pred eCCCcchhHHHHhhhcccCceEEEEeCCCCCeeEEeCCcccccccccCcceeeccccCCCCcceEEEEEEEEEcCEEecC
Confidence 99999999999999986699999999876789999999764 368999999997532 4677999999999998865
Q ss_pred CC-----CCEEEcccccceeeCHHHHHHHHHHHHHHhcc-----CCCccC-CCCCCcCcccccccCCccccccccccceE
Q 016916 258 KN-----LPVVFDSGSSYTYLNRVTYQTLTSIMKKELSA-----KSLKEA-PEDETLPLCWKGRRPFKNVHDVKKCFRTL 326 (380)
Q Consensus 258 ~~-----~~aiiDSGTs~~~lp~~~~~~l~~~i~~~~~~-----~~~~~~-~~~~~~~~C~~~~~~~~~~~~~~~~~P~l 326 (380)
+. ..+||||||++++||+++|++|.++|.+++.. ..+.+. .....+.+|++.....+. .....+|+|
T Consensus 223 ~~~~~~~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~C~~~~~~~~~--~~~~~~P~i 300 (381)
T 1t6e_X 223 PEGALATGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGNN--LGGYAVPNV 300 (381)
T ss_dssp CTTCSCTTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEECCCTTCSCEEEGGGCCEE--TTEECCCCE
T ss_pred CHHHccCCCEEEECCCccEEeCHHHHHHHHHHHHHhhcccccccccccccCCCCCCCCccCCCCCCccc--ccCCcCCeE
Confidence 42 57999999999999999999999999887641 112221 122345789975421100 011368999
Q ss_pred EEEEecCCCCeEEEEcCCeEEEEeCCCeEEEEEEeCCcC----CCCCeeEEccccc
Q 016916 327 ALSFTDGKTRTLFELTPEAYLIISNKGNVCLGILNGAEV----GLQDLNVIGGIGD 378 (380)
Q Consensus 327 ~f~f~g~~~~~~~~l~~~~y~~~~~~~~~C~~~~~~~~~----~~~~~~IlG~~~~ 378 (380)
+|+|+| +++|+|++++|+++..++..|++++..... .....||||+++.
T Consensus 301 ~f~f~g---g~~~~l~~~~y~~~~~~~~~Cl~~~~~~~~~~~~~~~~~~ILGd~fl 353 (381)
T 1t6e_X 301 QLGLDG---GSDWTMTGKNSMVDVKQGTACVAFVEMKGVAAGDGRAPAVILGGAQM 353 (381)
T ss_dssp EEEETT---SCEEEECHHHHEEEEETTEEEESEEECCCCC------CSEEECHHHH
T ss_pred EEEECC---CcEEEeCCCeEEEEcCCCeEEEEEEcCCCcccccCCCceEEEChHHh
Confidence 999986 699999999999987667899998876531 1124799999864
No 4
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=2.7e-49 Score=378.32 Aligned_cols=285 Identities=21% Similarity=0.343 Sum_probs=230.3
Q ss_pred EEEEEecCCCCCeeEEEEEEecCCCcEEEEEEEcCCCceEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCcCCCCC
Q 016916 37 LLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAPGH 116 (380)
Q Consensus 37 ~~lpl~~~~~~~~~y~~~i~vGtP~Q~~~v~~DTGSs~~wv~~~~~c~~C~~~~~~~f~p~~S~~~c~~~~c~~~~~~~~ 116 (380)
+.++.. +.+.+|+++|+||||+|++.|+|||||+++||+|. +|..| .+.++.|+|++|+ +++.
T Consensus 6 v~~~~~---~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~-~c~~c-~~~~~~y~~~~Ss------T~~~------ 68 (325)
T 2apr_A 6 VPMTDY---GNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIAST-LCTNC-GSGQTKYDPNQSS------TYQA------ 68 (325)
T ss_dssp EEEEEE---TTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBT-TCSSC-CTTSCCBCGGGCT------TCEE------
T ss_pred eeeeec---CCCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccC-CCchH-hcCCCCCCcccCC------Ceee------
Confidence 444443 24669999999999999999999999999999999 99999 6778999998884 1111
Q ss_pred CCCCCCCCCceeEEeCCCCeEEEEEEEEEEEEeecCCCcCCCceEEeeeEecCCCCCCCCcceEEeeCCCCC-------c
Q 016916 117 HNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPGASYHPLDGILGLGKGKS-------S 189 (380)
Q Consensus 117 ~~c~~~~~~~~~i~Y~~Gs~~~G~l~~D~v~l~~~~g~~~~~~~~FG~~~~~~~~~~~~~~~GIlGLg~~~~-------s 189 (380)
..|.|.+.|++|+.+.|.+++|+|+|+ +..++++.|||++.....+.....+||||||+... +
T Consensus 69 ------~~~~~~i~Yg~Gs~~~G~~~~D~v~~g----~~~v~~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~ 138 (325)
T 2apr_A 69 ------DGRTWSISYGDGSSASGILAKDNVNLG----GLLIKGQTIELAKREAASFASGPNDGLLGLGFDTITTVRGVKT 138 (325)
T ss_dssp ------EEEEEEEECTTSCEEEEEEEEEEEEET----TEEEEEEEEEEEEEECHHHHTSSCSEEEECSCGGGCSSTTCCC
T ss_pred ------CCCEEEEEECCCCCEEEEEEEEEEEEC----CEEECcEEEEEEeccCcccccCCCceEEEeCCcccccccCCCC
Confidence 367999999999879999999999995 56778999999988643233344899999998754 4
Q ss_pred hhhhccccccc-cceeeeeec---CCCceeEEECCCCC--CCCCcEEeecccCCCCCeeEEeeEEEECCEEeeeCCCCEE
Q 016916 190 IVSQLHSQKLI-RNVVGHCLS---GGGGGFLFFGDDLY--DSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGLKNLPVV 263 (380)
Q Consensus 190 ~~~~l~~~g~i-~~~Fs~~l~---~~~~G~l~~G~~~~--~~g~l~~~pl~~~~~~~w~v~l~~i~vg~~~~~~~~~~ai 263 (380)
++.+|+++|+| +++||+||. ....|.|+||+++. +.|++.|+|+.... .+|.|.+++|++++ .+......+|
T Consensus 139 ~~~~l~~qg~i~~~~FS~~l~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~-~~~~v~l~~i~vg~-~~~~~~~~~i 216 (325)
T 2apr_A 139 PMDNLISQGLISRPIFGVYLGKAKNGGGGEYIFGGYDSTKFKGSLTTVPIDNSR-GWWGITVDRATVGT-STVASSFDGI 216 (325)
T ss_dssp HHHHHHHTTSCSSSEEEEEECCGGGTCCEEEEETCCCGGGBCSCCEEEECBCTT-SSCEEEECEEEETT-EEEECCEEEE
T ss_pred HHHHHHhcCCCCCceEEEEecCCCCCCCCEEEEccCCchhccCceEEEEccCCC-CEEEEEEeEEEECC-EecCCCceEE
Confidence 67899999999 999999995 35689999999874 57999999998544 79999999999999 4444567899
Q ss_pred EcccccceeeCHHHHHHHHHHHHHHhccCCCccCCCCCCcCcccccccCCccccccccccceEEEEEecCCCCeEEEEcC
Q 016916 264 FDSGSSYTYLNRVTYQTLTSIMKKELSAKSLKEAPEDETLPLCWKGRRPFKNVHDVKKCFRTLALSFTDGKTRTLFELTP 343 (380)
Q Consensus 264 iDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~l~f~f~g~~~~~~~~l~~ 343 (380)
|||||++++||+++|+++.+++.+++... .....+|+. ..+|+|+|+|+| .+++||+
T Consensus 217 iDSGTs~~~lP~~~~~~~~~~~~~~~~~~-------g~~~~~C~~------------~~~p~i~f~f~g----~~~~ip~ 273 (325)
T 2apr_A 217 LDTGTTLLILPNNIAASVARAYGASDNGD-------GTYTISCDT------------SAFKPLVFSING----ASFQVSP 273 (325)
T ss_dssp ECTTCSSEEEEHHHHHHHHHHHTCEECSS-------SCEEECSCG------------GGCCCEEEEETT----EEEEECG
T ss_pred EecCCccEECCHHHHHHHHHHHhcccCCC-------CeEEEECCC------------CCCCcEEEEECC----EEEEECH
Confidence 99999999999999999999997654421 112346864 237999999997 6999999
Q ss_pred CeEEEEeCCCeEEEEEEeCCcCCCCCeeEEcccc
Q 016916 344 EAYLIISNKGNVCLGILNGAEVGLQDLNVIGGIG 377 (380)
Q Consensus 344 ~~y~~~~~~~~~C~~~~~~~~~~~~~~~IlG~~~ 377 (380)
++|+++.. +..|++.+.... .+.||||+++
T Consensus 274 ~~~~~~~~-~~~C~~~i~~~~---~~~~iLG~~f 303 (325)
T 2apr_A 274 DSLVFEEF-QGQCIAGFGYGN---WGFAIIGDTF 303 (325)
T ss_dssp GGGEEEEE-TTEEEESEEEES---SSSEEECHHH
T ss_pred HHEEEcCC-CCeEEEEEEcCC---CCCEEECHHH
Confidence 99998755 568997544321 3579999975
No 5
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=1.5e-49 Score=386.32 Aligned_cols=289 Identities=19% Similarity=0.330 Sum_probs=231.1
Q ss_pred EEEEEecCCCCCeeEEEEEEecCCCcEEEEEEEcCCCceEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCcCCCCC
Q 016916 37 LLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAPGH 116 (380)
Q Consensus 37 ~~lpl~~~~~~~~~y~~~i~vGtP~Q~~~v~~DTGSs~~wv~~~~~c~~C~~~~~~~f~p~~S~~~c~~~~c~~~~~~~~ 116 (380)
...||.. +.+.+|+++|+||||||++.|+|||||+++||+|. .|..|.+..++.|+|++|+. ++.
T Consensus 46 ~~~~l~n--~~d~~Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~-~C~~~~C~~~~~y~~~~SsT------~~~------ 110 (370)
T 3psg_A 46 GDEPLEN--YLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSV-YCSSLACSDHNQFNPDDSST------FEA------ 110 (370)
T ss_dssp CCCTTGG--GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSGGGTTSCCBCGGGCTT------CEE------
T ss_pred ceeccee--ccCCEEEEEEEEcCCCCEEEEEEeCCCCccEEECC-CCCCcccCCCCCCCCccCcC------cEE------
Confidence 3455553 35779999999999999999999999999999999 99865555789999998851 111
Q ss_pred CCCCCCCCCceeEEeCCCCeEEEEEEEEEEEEeecCCCcCCCceEEeeeEecCCC-CCCCCcceEEeeCCCCC------c
Q 016916 117 HNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPG-ASYHPLDGILGLGKGKS------S 189 (380)
Q Consensus 117 ~~c~~~~~~~~~i~Y~~Gs~~~G~l~~D~v~l~~~~g~~~~~~~~FG~~~~~~~~-~~~~~~~GIlGLg~~~~------s 189 (380)
..|.|.+.|++| ++.|.+++|+|+|+ +..++++.|||++..... +.....+||||||++.. +
T Consensus 111 ------~~~~~~i~Yg~G-s~~G~~~~Dtv~ig----~~~v~~~~Fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~ 179 (370)
T 3psg_A 111 ------TSQELSITYGTG-SMTGILGYDTVQVG----GISDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISASGATP 179 (370)
T ss_dssp ------EEEEEEEESSSC-EEEEEEEEEEEEET----TEEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGCGGGCCC
T ss_pred ------CCcEEEEEeCCc-eEEEEEEEEEEeeC----CcccCCeEEEEEEeecccccccCCccceeccCCccccccCCCC
Confidence 357999999999 59999999999995 577889999999876432 44566899999999764 4
Q ss_pred hhhhccccccc-cceeeeeecCC--CceeEEECCCCC--CCCCcEEeecccCCCCCeeEEeeEEEECCEEeee-CCCCEE
Q 016916 190 IVSQLHSQKLI-RNVVGHCLSGG--GGGFLFFGDDLY--DSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGL-KNLPVV 263 (380)
Q Consensus 190 ~~~~l~~~g~i-~~~Fs~~l~~~--~~G~l~~G~~~~--~~g~l~~~pl~~~~~~~w~v~l~~i~vg~~~~~~-~~~~ai 263 (380)
++.+|+++|+| +++||+||.+. .+|.|+|||+|+ +.|++.|+|+.+. .+|+|.+++|+++++.+.+ ....+|
T Consensus 180 ~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~g~l~~~pv~~~--~~w~v~l~~i~v~g~~~~~~~~~~ai 257 (370)
T 3psg_A 180 VFDNLWDQGLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYTGSLNWVPVSVE--GYWQITLDSITMDGETIACSGGCQAI 257 (370)
T ss_dssp HHHHHHHTTCSSSSEEEEEEC-----CEEEEETCCCGGGBSSCCEEEECSEE--TTEEEEECEEESSSSEEECTTCEEEE
T ss_pred HHHHHHHCCCCCCCEEEEEEccCCCCCeEEEEEeeChHhcCCcceeeccccc--ceeEEEEeEEEECCEEEecCCCceEE
Confidence 67889999999 89999999853 589999999874 6899999999987 6999999999999988765 356899
Q ss_pred EcccccceeeCHHHHHHHHHHHHHHhccCCCccCCCCCCcCcccccccCCccccccccccceEEEEEecCCCCeEEEEcC
Q 016916 264 FDSGSSYTYLNRVTYQTLTSIMKKELSAKSLKEAPEDETLPLCWKGRRPFKNVHDVKKCFRTLALSFTDGKTRTLFELTP 343 (380)
Q Consensus 264 iDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~l~f~f~g~~~~~~~~l~~ 343 (380)
+||||+++++|++++++|.+++.+... . ......+|... ..+|+|+|+|+| ++++|++
T Consensus 258 iDTGTs~~~lP~~~~~~i~~~i~a~~~------~-~g~~~v~C~~~-----------~~lP~i~f~~~g----~~~~l~~ 315 (370)
T 3psg_A 258 VDTGTSLLTGPTSAIANIQSDIGASEN------S-DGEMVISCSSI-----------DSLPDIVFTIDG----VQYPLSP 315 (370)
T ss_dssp ECTTCCSEEEEHHHHHHHHHHTTCEEC------T-TCCEECCGGGG-----------GGCCCEEEEETT----EEEEECH
T ss_pred EcCCCCcEECCHHHHHHHHHHhCCccc------C-CCcEEEECCCc-----------ccCCcEEEEECC----EEEEECH
Confidence 999999999999999999988854321 1 12234578764 358999999986 9999999
Q ss_pred CeEEEEeCCCeEEEE-EEeCCcC-CCCCeeEEcccc
Q 016916 344 EAYLIISNKGNVCLG-ILNGAEV-GLQDLNVIGGIG 377 (380)
Q Consensus 344 ~~y~~~~~~~~~C~~-~~~~~~~-~~~~~~IlG~~~ 377 (380)
++|+++ . +..|+. +...... ..+..||||+++
T Consensus 316 ~~yi~~-~-~~~C~~~~~~~~~~~~~~~~~ILG~~F 349 (370)
T 3psg_A 316 SAYILQ-D-DDSCTSGFEGMDVPTSSGELWILGDVF 349 (370)
T ss_dssp HHHEEE-C-SSCEEESEEEECCCTTSCCEEEECHHH
T ss_pred HHhccc-C-CCEEEEEEEeCCCCCCCCCcEEeChHH
Confidence 999998 3 346984 5543211 123479999975
No 6
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=6.4e-49 Score=375.59 Aligned_cols=286 Identities=20% Similarity=0.377 Sum_probs=232.7
Q ss_pred EEEEEecCCCCCeeEEEEEEecCCCcEEEEEEEcCCCceEEeCCCCCC--CCCCCCCCCCCCCCCCCCCCCccccCcCCC
Q 016916 37 LLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCV--RCVEAPHPLYRPSNDLVPCEDPICASLHAP 114 (380)
Q Consensus 37 ~~lpl~~~~~~~~~y~~~i~vGtP~Q~~~v~~DTGSs~~wv~~~~~c~--~C~~~~~~~f~p~~S~~~c~~~~c~~~~~~ 114 (380)
+.+||+. +.+.+|+++|.||||||++.|+|||||+++||+|. .|. .|. .++.|+|++|+ +++.
T Consensus 2 ~~~~l~n--~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~-~C~~~~C~--~~~~y~~~~Ss------T~~~---- 66 (324)
T 1am5_A 2 VTEQMKN--EADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSS-HCSAQACS--NHNKFKPRQSS------TYVE---- 66 (324)
T ss_dssp EEEEEEE--ETTTEEEEEEEETTTTEEEEEEEETTCCCEEECBT-TCCSHHHH--TSCCBCGGGCT------TCEE----
T ss_pred ceeeeec--CCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecC-CCCccccc--CCCcCCCccCC------CeEe----
Confidence 4678875 35679999999999999999999999999999999 897 576 47899998884 1121
Q ss_pred CCCCCCCCCCCceeEEeCCCCeEEEEEEEEEEEEeecCCCcCCCceEEeeeEecCCC-CCCCCcceEEeeCCCCC-----
Q 016916 115 GHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPG-ASYHPLDGILGLGKGKS----- 188 (380)
Q Consensus 115 ~~~~c~~~~~~~~~i~Y~~Gs~~~G~l~~D~v~l~~~~g~~~~~~~~FG~~~~~~~~-~~~~~~~GIlGLg~~~~----- 188 (380)
..|.|++.|++| ++.|.+++|+|+|+ +..++++.|||++..... +.....+||||||+...
T Consensus 67 --------~~~~~~i~Yg~G-s~~G~~~~D~v~~g----~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~ 133 (324)
T 1am5_A 67 --------TGKTVDLTYGTG-GMRGILGQDTVSVG----GGSDPNQELGESQTEPGPFQAAAPFDGILGLAYPSIAAAGA 133 (324)
T ss_dssp --------EEEEEEEECSSC-EEEEEEEEEEEESS----SSCEEEEEEEEEEECCSTTTTTCSSSEEEECSCGGGCGGGC
T ss_pred --------CCcEEEEEECCC-CeEEEEEECceeEC----CcEEcccEEEEEEecccccccCCCCceEEecCCccccccCC
Confidence 367999999999 56999999999995 467789999999987442 44567899999999764
Q ss_pred -chhhhccccccc-cceeeeeecCC--CceeEEECCCCC--CCCCcEEeecccCCCCCeeEEeeEEEECCEEeeeCCCCE
Q 016916 189 -SIVSQLHSQKLI-RNVVGHCLSGG--GGGFLFFGDDLY--DSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGLKNLPV 262 (380)
Q Consensus 189 -s~~~~l~~~g~i-~~~Fs~~l~~~--~~G~l~~G~~~~--~~g~l~~~pl~~~~~~~w~v~l~~i~vg~~~~~~~~~~a 262 (380)
+++.+|+++|+| +++||+||.+. ..|.|+||+++. +.|++.|+|+.+. .+|.|.+++|+++++.+......+
T Consensus 134 ~~~~~~l~~qg~i~~~~FS~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~~v~l~~i~v~~~~~~~~~~~a 211 (324)
T 1am5_A 134 VPVFDNMGSQSLVEKDLFSFYLSGGGANGSEVMLGGVDNSHYTGSIHWIPVTAE--KYWQVALDGITVNGQTAACEGCQA 211 (324)
T ss_dssp CCHHHHHHHTTCSSSSEEEEECCSTTCSCEEEEESSCCGGGBCSCCEEEEEEEE--TTEEEEECEEEETTEECCCCCEEE
T ss_pred CchHHhHHhcCCCCCCEEEEEecCCCCCCcEEEECccCHHHcCCceEEEecCCC--cEEEEEEeEEEECCceeeccCceE
Confidence 467889999999 99999999853 489999999874 5799999999876 699999999999998865444789
Q ss_pred EEcccccceeeCHHHHHHHHHHHHHHhccCCCccCCCCCCcCcccccccCCccccccccccceEEEEEecCCCCeEEEEc
Q 016916 263 VFDSGSSYTYLNRVTYQTLTSIMKKELSAKSLKEAPEDETLPLCWKGRRPFKNVHDVKKCFRTLALSFTDGKTRTLFELT 342 (380)
Q Consensus 263 iiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~l~f~f~g~~~~~~~~l~ 342 (380)
||||||++++||+++|++|.+++.+. .. ......+|+.. ..+|+|+|+|+| ++++|+
T Consensus 212 iiDSGTt~~~lp~~~~~~l~~~~~~~-~~-------~g~~~~~C~~~-----------~~~P~i~f~f~g----~~~~i~ 268 (324)
T 1am5_A 212 IVDTGTSKIVAPVSALANIMKDIGAS-EN-------QGEMMGNCASV-----------QSLPDITFTING----VKQPLP 268 (324)
T ss_dssp EECTTCSSEEECTTTHHHHHHHHTCE-EC-------CCCEECCTTSS-----------SSSCCEEEEETT----EEEEEC
T ss_pred EEecCCccEECCHHHHHHHHHHhCCc-cc-------CCcEEEeCCCc-----------ccCCcEEEEECC----EEEEEC
Confidence 99999999999999999999988654 20 11233579764 258999999985 999999
Q ss_pred CCeEEEEeCCCeEEE-EEEeCCcC-CCCCeeEEcccc
Q 016916 343 PEAYLIISNKGNVCL-GILNGAEV-GLQDLNVIGGIG 377 (380)
Q Consensus 343 ~~~y~~~~~~~~~C~-~~~~~~~~-~~~~~~IlG~~~ 377 (380)
+++|+++. +..|+ ++...... ...+.||||+++
T Consensus 269 ~~~y~~~~--~~~C~~~~~~~~~~~~~~~~~ilG~~f 303 (324)
T 1am5_A 269 PSAYIEGD--QAFCTSGLGSSGVPSNTSELWIFGDVF 303 (324)
T ss_dssp HHHHEEES--SSCEEECEEECCSCCSSSCEEEECHHH
T ss_pred HHHhcccC--CCeEEEEEEECccCCCCCCcEEEChHH
Confidence 99999986 56798 56654321 124589999975
No 7
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=1.3e-49 Score=387.85 Aligned_cols=288 Identities=17% Similarity=0.257 Sum_probs=232.1
Q ss_pred eEEEEEecCCCCCeeEEEEEEecCCCcEEEEEEEcCCCceEEeCCCCCC----CCCCCCCCCCCCCCCCCCCCCccccCc
Q 016916 36 SLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCV----RCVEAPHPLYRPSNDLVPCEDPICASL 111 (380)
Q Consensus 36 ~~~lpl~~~~~~~~~y~~~i~vGtP~Q~~~v~~DTGSs~~wv~~~~~c~----~C~~~~~~~f~p~~S~~~c~~~~c~~~ 111 (380)
...+||.. +.+.+|+++|+||||||++.|+|||||+++||+|. .|. .|.. |+.|+|++|+ +++.
T Consensus 50 ~~~~~l~n--~~~~~Y~~~I~IGTP~Q~f~vi~DTGSs~lWV~s~-~C~~~~~~C~~--~~~y~~~~Ss------T~~~- 117 (383)
T 2x0b_A 50 TSSVILTN--YMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSS-KCSRLYTACVY--HKLFDASDSS------SYKH- 117 (383)
T ss_dssp -CEEEEEE--ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TSCTTSHHHHT--SCCBCGGGCT------TCEE-
T ss_pred cceEeeee--cCCCEEEEEEEECCCCcEEEEEEeCCCCCeEEecc-CCCCCcccccC--CCCCCCCCCC------cEEE-
Confidence 34578874 35679999999999999999999999999999999 896 6874 6899999885 1221
Q ss_pred CCCCCCCCCCCCCCceeEEeCCCCeEEEEEEEEEEEEeecCCCcCCCceEEeeeEecCCC-CCCCCcceEEeeCCCCCc-
Q 016916 112 HAPGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPG-ASYHPLDGILGLGKGKSS- 189 (380)
Q Consensus 112 ~~~~~~~c~~~~~~~~~i~Y~~Gs~~~G~l~~D~v~l~~~~g~~~~~~~~FG~~~~~~~~-~~~~~~~GIlGLg~~~~s- 189 (380)
++|.|++.|++| ++.|.+++|+|+|+ +..++ +.|||++..... +.....+||||||+..++
T Consensus 118 -----------~~~~~~i~Yg~G-s~~G~~~~Dtv~ig----~~~v~-~~Fg~a~~~~g~~f~~~~~dGIlGLg~~~~s~ 180 (383)
T 2x0b_A 118 -----------NGTELTLRYSTG-TVSGFLSQDIITVG----GITVT-QMFGEVTEMPALPFMLAEFDGVVGMGFIEQAI 180 (383)
T ss_dssp -----------EEEEEEEECSSC-EEEEEEEEEEEEET----TEEEE-EEEEEEEECCHHHHTTCSSSEEEECSCGGGCG
T ss_pred -----------CCcEEEEEcCCc-cEEEEEEeeEEEEc----CceEE-EEEEEEEecCCcccccCCCceEeccCCCcccc
Confidence 467999999999 59999999999995 46677 999999886432 345678999999998654
Q ss_pred -----hhhhccccccc-cceeeeeecCC------CceeEEECCCCC--CCCCcEEeecccCCCCCeeEEeeEEEECCEEe
Q 016916 190 -----IVSQLHSQKLI-RNVVGHCLSGG------GGGFLFFGDDLY--DSSRVVWTSMSSDYTKYYSPGVAELFFGGETT 255 (380)
Q Consensus 190 -----~~~~l~~~g~i-~~~Fs~~l~~~------~~G~l~~G~~~~--~~g~l~~~pl~~~~~~~w~v~l~~i~vg~~~~ 255 (380)
++.+|.+||+| +++||+||.+. .+|.|+|||+|+ +.|++.|+|+... .+|+|.|++|+++++.+
T Consensus 181 ~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv~~~--~~w~v~l~~i~v~~~~~ 258 (383)
T 2x0b_A 181 GRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKT--GVWQIQMKGVSVGSSTL 258 (383)
T ss_dssp GGCCCHHHHHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEBSST--TSCEEEECEEEESSCCC
T ss_pred CCCCcHHHHHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEcCCC--ceEEEEEeEEEeCCceE
Confidence 66789999999 89999999853 389999999875 5799999999876 79999999999999875
Q ss_pred ee-CCCCEEEcccccceeeCHHHHHHHHHHHHHHhccCCCccCCCCCCcCcccccccCCccccccccccceEEEEEecCC
Q 016916 256 GL-KNLPVVFDSGSSYTYLNRVTYQTLTSIMKKELSAKSLKEAPEDETLPLCWKGRRPFKNVHDVKKCFRTLALSFTDGK 334 (380)
Q Consensus 256 ~~-~~~~aiiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~l~f~f~g~~ 334 (380)
.+ .+..||+||||+++++|++++++|.+++.+.. . ......+|+... .+|+|+|+|+|
T Consensus 259 ~~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~-------~-~g~~~v~C~~~~-----------~~P~i~f~~~g-- 317 (383)
T 2x0b_A 259 LCEDGCLALVDTGASYISGSTSSIEKLMEALGAKK-------R-LFDYVVKCNEGP-----------TLPDISFHLGG-- 317 (383)
T ss_dssp BSTTCEEEEECTTCSSEEECHHHHHHHHHHHTCEE-------C-SSCEEEEGGGTT-----------TCCCEEEEETT--
T ss_pred EcCCCcEEEEcCCCceEEcCHHHHHHHHHHhCCcc-------c-CCcEEEeccccc-----------cCceEEEEECC--
Confidence 43 35689999999999999999999999885432 1 122335798643 58999999986
Q ss_pred CCeEEEEcCCeEEEEeCC--CeEEE-EEEeCCcC-CCCCeeEEcccc
Q 016916 335 TRTLFELTPEAYLIISNK--GNVCL-GILNGAEV-GLQDLNVIGGIG 377 (380)
Q Consensus 335 ~~~~~~l~~~~y~~~~~~--~~~C~-~~~~~~~~-~~~~~~IlG~~~ 377 (380)
++|+|++++|+++..+ +..|+ ++...+.. +....||||+++
T Consensus 318 --~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~F 362 (383)
T 2x0b_A 318 --KEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATF 362 (383)
T ss_dssp --EEEEECHHHHBCCCCCCTTSEEEBSEEECCCCTTTCSCEEECHHH
T ss_pred --EEEEECHHHhEeeccCCCCCeEEEEEEecccCCCCCCcEEEChHH
Confidence 9999999999987643 45899 57654321 124589999975
No 8
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=8.8e-49 Score=375.39 Aligned_cols=282 Identities=16% Similarity=0.270 Sum_probs=226.1
Q ss_pred CCCeeEEEEEEecCCCcEEEEEEEcCCCceEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCcCCCCCCCCCCCCCC
Q 016916 46 YPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAPGHHNCEDPAQC 125 (380)
Q Consensus 46 ~~~~~y~~~i~vGtP~Q~~~v~~DTGSs~~wv~~~~~c~~C~~~~~~~f~p~~S~~~c~~~~c~~~~~~~~~~c~~~~~~ 125 (380)
+.+.+|+++|.||||+|++.|+|||||+++||+|. +|..|..+.++.|+|++|+ +|+.+ +.|
T Consensus 12 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~-~C~~~~~~~~~~y~~~~Ss------T~~~~-----------~~~ 73 (329)
T 3c9x_A 12 SADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSS-ETPKSSATGHAIYTPSKSS------TSKKV-----------SGA 73 (329)
T ss_dssp TTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBT-TSCHHHHTTSCCBCGGGCT------TCEEC-----------TTC
T ss_pred CCCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecC-CCCccccCCCCcCCcccCc------CceEc-----------CCC
Confidence 35679999999999999999999999999999999 9998877778999998884 22221 357
Q ss_pred ceeEEeCCCCeEEEEEEEEEEEEeecCCCcCCCceEEeeeEecCCC-CCCCCcceEEeeCCCCCc---------hhhhcc
Q 016916 126 DYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPG-ASYHPLDGILGLGKGKSS---------IVSQLH 195 (380)
Q Consensus 126 ~~~i~Y~~Gs~~~G~l~~D~v~l~~~~g~~~~~~~~FG~~~~~~~~-~~~~~~~GIlGLg~~~~s---------~~~~l~ 195 (380)
.|++.|++|+.+.|.+++|+|+|+ +..++++.|||++..... ......+||||||+...+ ++++|+
T Consensus 74 ~~~i~Yg~Gs~~~G~~~~D~v~ig----~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~ 149 (329)
T 3c9x_A 74 SWSISYGDGSSSSGDVYTDKVTIG----GFSVNTQGVESATRVSTEFVQDTVISGLVGLAFDSGNQVRPHPQKTWFSNAA 149 (329)
T ss_dssp BEEEECTTSCEEEEEEEEEEEEET----TEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHH
T ss_pred eEEEEeCCCCcEEEEEEEEEEEEC----CEEEcceEEEEEEecCccccccCCCceeEEeCcccccccCCCCCCCHHHHHH
Confidence 999999999779999999999995 567889999999886432 112468999999997544 556777
Q ss_pred ccccc-cceeeeeecCCCceeEEECCCCC--CCCCcEEeecccCCCCCeeEEeeEEEECCEEeeeCCCCEEEccccccee
Q 016916 196 SQKLI-RNVVGHCLSGGGGGFLFFGDDLY--DSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGLKNLPVVFDSGSSYTY 272 (380)
Q Consensus 196 ~~g~i-~~~Fs~~l~~~~~G~l~~G~~~~--~~g~l~~~pl~~~~~~~w~v~l~~i~vg~~~~~~~~~~aiiDSGTs~~~ 272 (380)
++ + +++||+||.++..|.|+||++++ +.|++.|+|+.... .+|.|.|++|+++++.+......+||||||++++
T Consensus 150 ~~--i~~~~FS~~l~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~-~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~ 226 (329)
T 3c9x_A 150 SS--LAEPLFTADLRHGQNGSYNFGYIDTSVAKGPVAYTPVDNSQ-GFWEFTASGYSVGGGKLNRNSIDGIADTGTTLLL 226 (329)
T ss_dssp TT--SSSSEEEEECCSSSCEEEEESSCCGGGCSSCEEEEECBCTT-SSCEEEECCEEETTCCCCSCCEEEEECTTCCSEE
T ss_pred Hh--cCCCEEEEEecCCCCcEEEEeCcChhhcccceEEEEccCCC-ceEEEEEeeEEECCEeccCCCceEEEECCCCcEe
Confidence 65 6 89999999877799999999874 67999999998544 7999999999999987765567899999999999
Q ss_pred eCHHHHHHHHHHHHHHhccCCCccCCCCCCcCcccccccCCccccccccccceEEEEEecCCCCeEEEEcCCeEEEEeCC
Q 016916 273 LNRVTYQTLTSIMKKELSAKSLKEAPEDETLPLCWKGRRPFKNVHDVKKCFRTLALSFTDGKTRTLFELTPEAYLIISNK 352 (380)
Q Consensus 273 lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~l~f~f~g~~~~~~~~l~~~~y~~~~~~ 352 (380)
||++++++|.+++.++... .. ......+|+. .+|+|+|+|+| ++++||+++|++...+
T Consensus 227 lp~~~~~~i~~~i~~a~~~----~~-~~~~~~~C~~-------------~~P~i~f~f~g----~~~~ip~~~~~~~~~~ 284 (329)
T 3c9x_A 227 LDDNVVDAYYANVQSAQYD----NQ-QEGVVFDCDE-------------DLPSFSFGVGS----STITIPGDLLNLTPLE 284 (329)
T ss_dssp ECHHHHHHHHTTCTTCEEE----TT-TTEEEEETTC-------------CCCCEEEEETT----EEEEECGGGGEEEESS
T ss_pred CCHHHHHHHHHhCCCcEEc----CC-CCEEEEECCC-------------CCCcEEEEECC----EEEEECHHHeeeeccC
Confidence 9999999988887443221 11 1112246873 37999999986 9999999999987633
Q ss_pred --CeEEEE-EEeCCcCCCCCeeEEcccc
Q 016916 353 --GNVCLG-ILNGAEVGLQDLNVIGGIG 377 (380)
Q Consensus 353 --~~~C~~-~~~~~~~~~~~~~IlG~~~ 377 (380)
...|++ +.... ..+.||||+++
T Consensus 285 ~~~~~C~~~i~~~~---~~~~~ILG~~f 309 (329)
T 3c9x_A 285 EGSSTCFGGLQSSS---GIGINIFGDVA 309 (329)
T ss_dssp TTCSEEEESEEECT---TTTSEEECHHH
T ss_pred CCCCeEEEEEEcCC---CCCcEEEChHH
Confidence 368996 44433 23579999975
No 9
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=1.3e-48 Score=374.15 Aligned_cols=286 Identities=19% Similarity=0.302 Sum_probs=230.5
Q ss_pred EEEEecCCCCCeeEEEEEEecCCCcEEEEEEEcCCCceEEeCCCCCCC--CCCCCCCCCCCCCCCCCCCCccccCcCCCC
Q 016916 38 LFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVR--CVEAPHPLYRPSNDLVPCEDPICASLHAPG 115 (380)
Q Consensus 38 ~lpl~~~~~~~~~y~~~i~vGtP~Q~~~v~~DTGSs~~wv~~~~~c~~--C~~~~~~~f~p~~S~~~c~~~~c~~~~~~~ 115 (380)
.+||... .+.+|+++|+||||||++.|+|||||+++||+|. +|.. |. .++.|+|++|+ +++
T Consensus 4 ~~~l~~~--~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~-~C~~~~C~--~~~~y~~~~Ss------T~~------ 66 (329)
T 1dpj_A 4 DVPLTNY--LNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSN-ECGSLACF--LHSKYDHEASS------SYK------ 66 (329)
T ss_dssp EEECEEE--TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSHHHH--TSCCBCGGGCT------TCE------
T ss_pred ceeeeec--CCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecC-CCCCcccC--CcCcCCcccCc------CeE------
Confidence 4677642 4679999999999999999999999999999999 8986 65 46899998884 111
Q ss_pred CCCCCCCCCCceeEEeCCCCeEEEEEEEEEEEEeecCCCcCCCceEEeeeEecCC-CCCCCCcceEEeeCCCCCc-----
Q 016916 116 HHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVP-GASYHPLDGILGLGKGKSS----- 189 (380)
Q Consensus 116 ~~~c~~~~~~~~~i~Y~~Gs~~~G~l~~D~v~l~~~~g~~~~~~~~FG~~~~~~~-~~~~~~~~GIlGLg~~~~s----- 189 (380)
.+.|.|.+.|++| .+.|.+++|+|+|+ +..++++.|||++.... .+.....+||||||+...+
T Consensus 67 ------~~~~~~~i~Yg~G-s~~G~~~~D~v~ig----~~~~~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~ 135 (329)
T 1dpj_A 67 ------ANGTEFAIQYGTG-SLEGYISQDTLSIG----DLTIPKQDFAEATSEPGLTFAFGKFDGILGLGYDTISVDKVV 135 (329)
T ss_dssp ------EEEEEEEEEETTE-EEEEEEEEEEEEET----TEEEEEEEEEEEEECCHHHHTTCSCSEEEECSCGGGCGGGCC
T ss_pred ------ECCcEEEEEECCc-eEEEEEEEEEEEEC----CeEECCeEEEEEEecCccccccCCcceEEEeCCchhhccCCC
Confidence 1467999999999 79999999999995 56788999999988643 2334568999999998654
Q ss_pred -hhhhccccccc-cceeeeeecCC-----CceeEEECCCCC--CCCCcEEeecccCCCCCeeEEeeEEEECCEEeeeCCC
Q 016916 190 -IVSQLHSQKLI-RNVVGHCLSGG-----GGGFLFFGDDLY--DSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGLKNL 260 (380)
Q Consensus 190 -~~~~l~~~g~i-~~~Fs~~l~~~-----~~G~l~~G~~~~--~~g~l~~~pl~~~~~~~w~v~l~~i~vg~~~~~~~~~ 260 (380)
++.+|+++|+| +++||+||.+. ..|.|+||+++. +.|++.|+|+... .+|.|.|++|+++++.+.....
T Consensus 136 ~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~~v~l~~i~v~~~~~~~~~~ 213 (329)
T 1dpj_A 136 PPFYNAIQQDLLDEKRFAFYLGDTSKDTENGGEATFGGIDESKFKGDITWLPVRRK--AYWEVKFEGIGLGDEYAELESH 213 (329)
T ss_dssp CHHHHHHHTTCCSSSEEEEEECCGGGTCSSSEEEEESSCCGGGEEEEEEEEECSSB--TTBEEEEEEEEETTEEEECSSC
T ss_pred CHHHHHHhcCCcCCCEEEEEecCCCCCCCCCcEEEEcCCChhhcCCceEEEEcCCC--ceEEEEeeeEEECCeEecCCCc
Confidence 45678899999 89999999743 379999999874 5689999999876 6999999999999998877778
Q ss_pred CEEEcccccceeeCHHHHHHHHHHHHHHhccCCCccCCCCCCcCcccccccCCccccccccccceEEEEEecCCCCeEEE
Q 016916 261 PVVFDSGSSYTYLNRVTYQTLTSIMKKELSAKSLKEAPEDETLPLCWKGRRPFKNVHDVKKCFRTLALSFTDGKTRTLFE 340 (380)
Q Consensus 261 ~aiiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~l~f~f~g~~~~~~~~ 340 (380)
.+||||||++++||+++|++|.+++.+. . .. ......+|+.. ..+|+|+|+|+| .+++
T Consensus 214 ~aiiDSGTt~~~lP~~~~~~l~~~~~~~-~-----~~-~g~~~~~C~~~-----------~~~P~i~f~f~g----~~~~ 271 (329)
T 1dpj_A 214 GAAIDTGTSLITLPSGLAEMINAEIGAK-K-----GW-TGQYTLDCNTR-----------DNLPDLIFNFNG----YNFT 271 (329)
T ss_dssp EEEECTTCSCEEECHHHHHHHHHHHTCE-E-----CT-TSSEEECGGGG-----------GGCCCEEEEETT----EEEE
T ss_pred cEEeeCCCCcEECCHHHHHHHHHHhCCc-c-----CC-CCeEEEECCCC-----------CcCCcEEEEECC----EEEE
Confidence 9999999999999999999999988543 1 11 11122368653 358999999986 9999
Q ss_pred EcCCeEEEEeCCCeEEE-EEEeCCcC-CCCCeeEEcccc
Q 016916 341 LTPEAYLIISNKGNVCL-GILNGAEV-GLQDLNVIGGIG 377 (380)
Q Consensus 341 l~~~~y~~~~~~~~~C~-~~~~~~~~-~~~~~~IlG~~~ 377 (380)
|++++|+++.. ..|+ ++...... +.++.||||+++
T Consensus 272 i~~~~y~~~~~--~~C~~~~~~~~~~~~~~~~~iLG~~f 308 (329)
T 1dpj_A 272 IGPYDYTLEVS--GSCISAITPMDFPEPVGPLAIVGDAF 308 (329)
T ss_dssp ECTTTSEEEET--TEEEECEEECCCCTTTCSEEEECHHH
T ss_pred ECHHHhEecCC--CEEEEEEEecccCCCCCCcEEEChHH
Confidence 99999999764 5799 56554211 124589999975
No 10
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=1.7e-48 Score=373.37 Aligned_cols=280 Identities=18% Similarity=0.253 Sum_probs=223.1
Q ss_pred CCeeEEEEEEecCCCcEEEEEEEcCCCceEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCcCCCCCCCCCCCCCCc
Q 016916 47 PTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAPGHHNCEDPAQCD 126 (380)
Q Consensus 47 ~~~~y~~~i~vGtP~Q~~~v~~DTGSs~~wv~~~~~c~~C~~~~~~~f~p~~S~~~c~~~~c~~~~~~~~~~c~~~~~~~ 126 (380)
.+.+|+++|.||||+|++.|+|||||+++||+|. +|..|.. .++.|+|++|+ +++.+ +.|.
T Consensus 13 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~-~C~~~~~-~~~~y~~~~Ss------T~~~~-----------~~~~ 73 (329)
T 1oew_A 13 LDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSS-ETTASEV-XQTIYTPSKST------TAKLL-----------SGAT 73 (329)
T ss_dssp TCCCEEEEEEETTTTEEEEEEEETTCCCEEECBT-TSCGGGC--CCCBCGGGCT------TCEEE-----------EEEE
T ss_pred CCCEEEEEEEECCCCeEEEEEECCCCCCeEEecC-CCCcccc-ccCccCCccCc------cceec-----------CCCe
Confidence 5678999999999999999999999999999999 9998876 68899999884 12211 2568
Q ss_pred eeEEeCCCCeEEEEEEEEEEEEeecCCCcCCCceEEeeeEecCCC-CCCCCcceEEeeCCCCCc---------hhhhccc
Q 016916 127 YELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPG-ASYHPLDGILGLGKGKSS---------IVSQLHS 196 (380)
Q Consensus 127 ~~i~Y~~Gs~~~G~l~~D~v~l~~~~g~~~~~~~~FG~~~~~~~~-~~~~~~~GIlGLg~~~~s---------~~~~l~~ 196 (380)
|++.|++|+.+.|.+++|+|+|+ +..++++.|||++..... +.....+||||||+...+ ++++|++
T Consensus 74 ~~i~Yg~Gs~~~G~~~~D~v~~g----~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~ 149 (329)
T 1oew_A 74 WSISYGDGSSSSGDVYTDTVSVG----GLTVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTVSPTQQKTFFDNAKA 149 (329)
T ss_dssp EEEECTTSCEEEEEEEEEEEEET----TEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHTT
T ss_pred EEEEeCCCCcEEEEEEEEEEEEC----CEEEeeeEEEEEEecCccccccCCCceEEEeccccccccCcCCCCCHHHHHHH
Confidence 99999999779999999999995 567889999999986432 112467999999997544 5577777
Q ss_pred cccc-cceeeeeecCCCceeEEECCCCC--CCCCcEEeecccCCCCCeeEEeeEEEECCEEeeeCCCCEEEcccccceee
Q 016916 197 QKLI-RNVVGHCLSGGGGGFLFFGDDLY--DSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGLKNLPVVFDSGSSYTYL 273 (380)
Q Consensus 197 ~g~i-~~~Fs~~l~~~~~G~l~~G~~~~--~~g~l~~~pl~~~~~~~w~v~l~~i~vg~~~~~~~~~~aiiDSGTs~~~l 273 (380)
+ + +++||+||.++..|.|+||++++ +.|++.|+|+.... .+|.|.|++|+++++.+......+||||||++++|
T Consensus 150 ~--i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~-~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~l 226 (329)
T 1oew_A 150 S--LDSPVFTADLGYHAPGTYNFGFIDTTAYTGSITYTAVSTKQ-GFWEWTSTGYAVGSGTFKSTSIDGIADTGTTLLYL 226 (329)
T ss_dssp T--SSSSEEEEECCSSSCEEEEESCCCTTSSSSCCEEEECBCTT-SSCEEEEEEEEETTSCCEEEEEEEEECTTCCSEEE
T ss_pred h--ccCcEEEEEccCCCCeEEEEeccChHhcccceEEEEccCCC-ceEEEEEeeEEECCeeccCCCceEEEeCCCCCEEC
Confidence 6 6 89999999877799999999874 57999999998544 79999999999999876545578999999999999
Q ss_pred CHHHHHHHHHHHHHHhccCCCccCCCCCCcCcccccccCCccccccccccceEEEEEecCCCCeEEEEcCCeEEEEeCC-
Q 016916 274 NRVTYQTLTSIMKKELSAKSLKEAPEDETLPLCWKGRRPFKNVHDVKKCFRTLALSFTDGKTRTLFELTPEAYLIISNK- 352 (380)
Q Consensus 274 p~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~l~f~f~g~~~~~~~~l~~~~y~~~~~~- 352 (380)
|++++++|.+++.++... .. ......+|+. .+|+|+|+|+| ++++||+++|++...+
T Consensus 227 P~~~~~~l~~~i~~a~~~----~~-~g~~~~~C~~-------------~~P~i~f~fgg----~~~~ip~~~~~~~~~~~ 284 (329)
T 1oew_A 227 PATVVSAYWAQVSGAKSS----SS-VGGYVFPCSA-------------TLPSFTFGVGS----ARIVIPGDYIDFGPIST 284 (329)
T ss_dssp CHHHHHHHHTTSTTCEEE----TT-TTEEEEETTC-------------CCCCEEEEETT----EEEEECHHHHEEEESST
T ss_pred CHHHHHHHHHhCCCcEEc----CC-CCEEEEECCC-------------CCCcEEEEECC----EEEEECHHHeeeeecCC
Confidence 999999998887443221 11 1112346873 37999999964 9999999999987632
Q ss_pred -CeEEEE-EEeCCcCCCCCeeEEcccc
Q 016916 353 -GNVCLG-ILNGAEVGLQDLNVIGGIG 377 (380)
Q Consensus 353 -~~~C~~-~~~~~~~~~~~~~IlG~~~ 377 (380)
...|++ +.... ..+.||||+++
T Consensus 285 ~~~~C~~~i~~~~---~~~~~iLG~~f 308 (329)
T 1oew_A 285 GSSSCFGGIQSSA---GIGINIFGDVA 308 (329)
T ss_dssp TCSEEEESEEEST---TTSSEEECHHH
T ss_pred CCCeEEEEEEeCC---CCCceEEChHH
Confidence 368997 44332 23589999975
No 11
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=4.1e-48 Score=373.91 Aligned_cols=288 Identities=19% Similarity=0.304 Sum_probs=229.2
Q ss_pred EEEEEecCCCCCeeEEEEEEecCCCcEEEEEEEcCCCceEEeCCCCCC--CCCCCCCCCCCCCCCCCCCCCccccCcCCC
Q 016916 37 LLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCV--RCVEAPHPLYRPSNDLVPCEDPICASLHAP 114 (380)
Q Consensus 37 ~~lpl~~~~~~~~~y~~~i~vGtP~Q~~~v~~DTGSs~~wv~~~~~c~--~C~~~~~~~f~p~~S~~~c~~~~c~~~~~~ 114 (380)
..+||.. +.+.+|+++|.||||||++.|+|||||+++||+|. .|. .|. .++.|+|++|+ +++
T Consensus 13 ~~~~l~n--~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~-~C~~~~C~--~~~~y~~~~Ss------T~~----- 76 (351)
T 1tzs_A 13 AKEPLIN--YLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSV-YCTSPACK--THSRFQPSQSS------TYS----- 76 (351)
T ss_dssp -CCTTGG--GSSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSGGGT--TSCCBCGGGCT------TCB-----
T ss_pred cceecee--cCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecC-CCCccccC--CCCcCCcccCc------ceE-----
Confidence 3466663 35679999999999999999999999999999999 897 676 47899998884 111
Q ss_pred CCCCCCCCCCCceeEEeCCCCeEEEEEEEEEEEEeecCCCcCCCceEEeeeEecCCC-CCCCCcceEEeeCCCCCc----
Q 016916 115 GHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPG-ASYHPLDGILGLGKGKSS---- 189 (380)
Q Consensus 115 ~~~~c~~~~~~~~~i~Y~~Gs~~~G~l~~D~v~l~~~~g~~~~~~~~FG~~~~~~~~-~~~~~~~GIlGLg~~~~s---- 189 (380)
...|.|++.|++| ++.|.+++|+|+|+ +..++++.|||++..... +.....+||||||+...+
T Consensus 77 -------~~~~~~~i~Yg~G-s~~G~~~~D~v~ig----~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~ 144 (351)
T 1tzs_A 77 -------QPGQSFSIQYGTG-SLSGIIGADQVSVE----GLTVVGQQFGESVTEPGQTFVDAEFDGILGLGYPSLAVGGV 144 (351)
T ss_dssp -------CCSCEEEEESSSC-EEEEEEEEEEEEET----TEEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGSGGGC
T ss_pred -------ECCCEEEEEeCCC-CeEEEEEEeEEEEC----CeEECCeEEEEEEeccccccccCCCceEEecCCccccccCC
Confidence 1478999999999 58999999999995 567789999999876432 334568999999998654
Q ss_pred --hhhhccccccc-cceeeeeecCC----CceeEEECCCCC--CCCCcEEeecccCCCCCeeEEeeEEEECCEEeee-CC
Q 016916 190 --IVSQLHSQKLI-RNVVGHCLSGG----GGGFLFFGDDLY--DSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGL-KN 259 (380)
Q Consensus 190 --~~~~l~~~g~i-~~~Fs~~l~~~----~~G~l~~G~~~~--~~g~l~~~pl~~~~~~~w~v~l~~i~vg~~~~~~-~~ 259 (380)
++.+|+++|+| +++||+||.+. ..|.|+||+++. +.|++.|+|+... .+|.|.|++|+++++.+.. ..
T Consensus 145 ~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~~v~l~~i~v~~~~~~~~~~ 222 (351)
T 1tzs_A 145 TPVFDNMMAQNLVDLPMFSVYMSSNPEGGAGSELIFGGYDHSHFSGSLNWVPVTKQ--AYWQIALDNIQVGGTVMFCSEG 222 (351)
T ss_dssp CCHHHHHHHTTCCSSSEEEEECCCCC--CTTCEEEETSCCGGGBCSCCEEEECSEE--TTEEEEEEEEEETTEEEECTTC
T ss_pred CcHHHHHHHCCCCCCCEEEEEEcCCCCCCCCCEEEECCCCHHHcCCceEEEecCCC--ceEEEEeCEEEECCceEEcCCC
Confidence 67789999999 89999999854 279999999874 5799999999876 6999999999999988543 34
Q ss_pred CCEEEcccccceeeCHHHHHHHHHHHHHHhccCCCccCCCCCCcCcccccccCCccccccccccceEEEEEecCCCCeEE
Q 016916 260 LPVVFDSGSSYTYLNRVTYQTLTSIMKKELSAKSLKEAPEDETLPLCWKGRRPFKNVHDVKKCFRTLALSFTDGKTRTLF 339 (380)
Q Consensus 260 ~~aiiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~l~f~f~g~~~~~~~ 339 (380)
..+||||||++++||+++|++|.+++.+... ......+|+.. ..+|+|+|+|+| +++
T Consensus 223 ~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~--------~g~~~~~C~~~-----------~~~P~i~f~f~g----~~~ 279 (351)
T 1tzs_A 223 CQAIVDTGTSLITGPSDKIKQLQNAIGAAPV--------DGEYAVECANL-----------NVMPDVTFTING----VPY 279 (351)
T ss_dssp EEEEECTTCSSEEECHHHHHHHHHHHTCEEC--------SSSEEECGGGG-----------GGSCCEEEEETT----EEE
T ss_pred ceEEeccCCcceeCCHHHHHHHHHHhCCccc--------CCeEEEeCCCC-----------ccCCcEEEEECC----EEE
Confidence 6899999999999999999999998854321 11223479764 258999999975 999
Q ss_pred EEcCCeEEEEeCC--CeEEE-EEEeCCcC-CCCCeeEEcccc
Q 016916 340 ELTPEAYLIISNK--GNVCL-GILNGAEV-GLQDLNVIGGIG 377 (380)
Q Consensus 340 ~l~~~~y~~~~~~--~~~C~-~~~~~~~~-~~~~~~IlG~~~ 377 (380)
+|++++|+++... +..|+ ++...... +..+.||||+++
T Consensus 280 ~i~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~iLG~~f 321 (351)
T 1tzs_A 280 TLSPTAYTLLDFVDGMQFCSSGFQGLDIHPPAGPLWILGDVF 321 (351)
T ss_dssp EECTTTSEECC-----CCEEESEEECCCCTTTCSCEEECHHH
T ss_pred EECHHHhEeeccCCCCCeEEEEEEECCCCCCCCCeEEEChHH
Confidence 9999999987542 35799 56654321 124589999975
No 12
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=7e-48 Score=373.74 Aligned_cols=296 Identities=19% Similarity=0.309 Sum_probs=235.8
Q ss_pred CCCeEEEEEecCCCCCeeEEEEEEecCCCcEEEEEEEcCCCceEEeCCCCCC---CCCCCCCCCCCCCCCCCCCCCcccc
Q 016916 33 VGSSLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCV---RCVEAPHPLYRPSNDLVPCEDPICA 109 (380)
Q Consensus 33 ~~~~~~lpl~~~~~~~~~y~~~i~vGtP~Q~~~v~~DTGSs~~wv~~~~~c~---~C~~~~~~~f~p~~S~~~c~~~~c~ 109 (380)
.++...+||.. +.+.+|+++|.||||+|++.|+|||||+++||+|. +|. .|.. ++.|+|++|+ +++
T Consensus 4 ~g~~~~~~l~~--~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~-~C~~~~~C~~--~~~y~~~~Ss------T~~ 72 (361)
T 1mpp_A 4 DGSVDTPGLYD--FDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHK-GCDNSEGCVG--KRFFDPSSSS------TFK 72 (361)
T ss_dssp -CCEEEEEEEE--TTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBT-TCCGGGTCCS--SCCBCGGGCT------TCE
T ss_pred CCccceEEeec--CCCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCC-CCCCCccCCC--CCcCCCccCC------ceE
Confidence 34567789985 34679999999999999999999999999999999 898 7864 7899998884 122
Q ss_pred CcCCCCCCCCCCCCCCceeEEeCCCCeEEEEEEEEEEEEeecCCCcCCCceEEeeeEecCC------CCCCCCcceEEee
Q 016916 110 SLHAPGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVP------GASYHPLDGILGL 183 (380)
Q Consensus 110 ~~~~~~~~~c~~~~~~~~~i~Y~~Gs~~~G~l~~D~v~l~~~~g~~~~~~~~FG~~~~~~~------~~~~~~~~GIlGL 183 (380)
. ..|.|.+.|++|+ +.|.+++|+|+|+ +..++++.|||++.... .+.....+|||||
T Consensus 73 ~------------~~~~~~i~Yg~Gs-~~G~~~~D~v~~g----~~~v~~~~fg~~~~~~~~~~~~~~~~~~~~~GilGL 135 (361)
T 1mpp_A 73 E------------TDYNLNITYGTGG-ANGIYFRDSITVG----GATVKQQTLAYVDNVSGPTAEQSPDSELFLDGIFGA 135 (361)
T ss_dssp E------------EEEEEEEECSSCE-EEEEEEEEEEEET----TEEEEEEEEEEEEEEESGGGSSCTTCSSCCCEEEEC
T ss_pred e------------cCCeEEEEECCce-EEEEEEEEEEEEC----CEEEeceEEEEEEeccCccccccccccCCCCCEEEe
Confidence 1 3579999999995 8999999999995 56788999999988744 2445678999999
Q ss_pred CCCCC------------chhhhccccccc-cceeeeeecCC-CceeEEECCCCC--CCCCcEEeecccCCC--CCeeEEe
Q 016916 184 GKGKS------------SIVSQLHSQKLI-RNVVGHCLSGG-GGGFLFFGDDLY--DSSRVVWTSMSSDYT--KYYSPGV 245 (380)
Q Consensus 184 g~~~~------------s~~~~l~~~g~i-~~~Fs~~l~~~-~~G~l~~G~~~~--~~g~l~~~pl~~~~~--~~w~v~l 245 (380)
|+... +++.+|+++|+| +++||+||.+. ..|.|+||++++ +.|++.|+|+..... .+|.|.|
T Consensus 136 g~~~~s~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~~~v~l 215 (361)
T 1mpp_A 136 AYPDNTAMEAEYGDTYNTVHVNLYKQGLISSPVFSVYMNTNDGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWDAPV 215 (361)
T ss_dssp SCGGGSHHHHHHSCCCCCHHHHHHHTTSSSSSEEEEECCCSSSEEEEEESSCCGGGBSSCCEEEECEEETTEEEEEEEEE
T ss_pred CCcccccccccccccCCCHHHHHHHcCCCCCcEEEEEecCCCCCcEEEEecCChhhcCCceEEEEcccCCCceeEEEEEE
Confidence 98744 456689999999 89999999864 689999999874 579999999998742 2999999
Q ss_pred eEEEECCEEeee-CCCCEE-EcccccceeeCHHHHHHHHHHHHHHhccCCCccCCCCCCcCcccccccCCcccccccccc
Q 016916 246 AELFFGGETTGL-KNLPVV-FDSGSSYTYLNRVTYQTLTSIMKKELSAKSLKEAPEDETLPLCWKGRRPFKNVHDVKKCF 323 (380)
Q Consensus 246 ~~i~vg~~~~~~-~~~~ai-iDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ 323 (380)
++|+++++.+.. ....+| |||||++++||+++|++|.+++.+... .. ......+|+... .+
T Consensus 216 ~~i~v~~~~~~~~~~~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~~~-----~~-~g~~~~~C~~~~-----------~~ 278 (361)
T 1mpp_A 216 TGVKIDGSDAVSFDGAQAFTIDTGTNFFIAPSSFAEKVVKAALPDAT-----ES-QQGYTVPCSKYQ-----------DS 278 (361)
T ss_dssp EEEEETTEEEEEEEEEEEEEEETTCCSEEEEHHHHHHHHHHHCTTCE-----EE-TTEEEEEHHHHT-----------TC
T ss_pred eEEEECCeeeccCCCCEEEEECCCCCceeCCHHHHHHHHHHhCCccc-----CC-CCcEEEECCCcc-----------cC
Confidence 999999988743 346899 999999999999999999999865422 11 112335798642 46
Q ss_pred -ceEEEEE--ecC-CCCeEEEEcCCeEEEEeCC-CeEEE-EEEeCCcCCCCCeeEEcccc
Q 016916 324 -RTLALSF--TDG-KTRTLFELTPEAYLIISNK-GNVCL-GILNGAEVGLQDLNVIGGIG 377 (380)
Q Consensus 324 -P~l~f~f--~g~-~~~~~~~l~~~~y~~~~~~-~~~C~-~~~~~~~~~~~~~~IlG~~~ 377 (380)
|+|+|+| ++. .++++++|++++|+++... +..|+ ++.... .+.||||+++
T Consensus 279 ~p~i~f~f~~g~~~~~g~~~~i~~~~y~~~~~~~~~~C~~~i~~~~----~~~~iLG~~f 334 (361)
T 1mpp_A 279 KTTFSLVLQKSGSSSDTIDVSVPISKMLLPVDKSGETCMFIVLPDG----GNQFIVGNLF 334 (361)
T ss_dssp CCEEEEEEECTTCSSCEEEEEEEGGGGEEECSSSSCEEEESEEEES----SSCCEEEHHH
T ss_pred CCcEEEEEEcCCcCCCCeEEEECHHHhEEecCCCCCeeEEEEEeCC----CCCEEEChHH
Confidence 9999999 610 0139999999999998753 46898 666542 3479999975
No 13
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=9.1e-49 Score=375.32 Aligned_cols=284 Identities=22% Similarity=0.400 Sum_probs=228.2
Q ss_pred EEEecCCCCCeeEEEEEEecCCCcEEEEEEEcCCCceEEeCCCCCC--CCCCCCCCCCCCCCCCCCCCCccccCcCCCCC
Q 016916 39 FQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCV--RCVEAPHPLYRPSNDLVPCEDPICASLHAPGH 116 (380)
Q Consensus 39 lpl~~~~~~~~~y~~~i~vGtP~Q~~~v~~DTGSs~~wv~~~~~c~--~C~~~~~~~f~p~~S~~~c~~~~c~~~~~~~~ 116 (380)
+||+ +.+.+|+++|.||||||++.|+|||||+++||+|. +|. .|.. ++.|+|++|+ +++.
T Consensus 5 ~~l~---~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~-~C~~~~C~~--~~~y~~~~Ss------T~~~------ 66 (329)
T 1htr_B 5 EPMA---YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSV-YCQSQACTS--HSRFNPSESS------TYST------ 66 (329)
T ss_dssp CGGG---GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSHHHHT--SCCBCGGGCT------TCEE------
T ss_pred eeeE---EcCCEEEEEEEECCCCcEEEEEEcCCCccEEEecC-CCCCcccCC--CCcCCCccCC------CeEE------
Confidence 4555 35779999999999999999999999999999999 897 4763 7899998884 1221
Q ss_pred CCCCCCCCCceeEEeCCCCeEEEEEEEEEEEEeecCCCcCCCceEEeeeEecCCC-CCCCCcceEEeeCCCCC------c
Q 016916 117 HNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPG-ASYHPLDGILGLGKGKS------S 189 (380)
Q Consensus 117 ~~c~~~~~~~~~i~Y~~Gs~~~G~l~~D~v~l~~~~g~~~~~~~~FG~~~~~~~~-~~~~~~~GIlGLg~~~~------s 189 (380)
..|.|++.|++| ++.|.+++|+|+|+ +..++++.|||++..... +.....+||||||+... +
T Consensus 67 ------~~~~~~i~Yg~g-s~~G~~~~D~v~~g----~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~ 135 (329)
T 1htr_B 67 ------NGQTFSLQYGSG-SLTGFFGYDTLTVQ----SIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPALSVDEATT 135 (329)
T ss_dssp ------EEEEEEEEETTE-EEEEEEEEEEEEET----TEEEEEEEEEEESSCSSGGGGGCSCCEEEECCCCSCCCTTCCS
T ss_pred ------CCcEEEEEeCCC-CeEEEEEeeeEEEc----ceEECceEEEEEEEccccccccCCCceEEecCCCcccccCCCC
Confidence 367999999999 56999999999995 567889999999876432 33456899999999865 4
Q ss_pred hhhhccccccc-cceeeeeecCCC---ceeEEECCCCC--CCCCcEEeecccCCCCCeeEEeeEEEECCEEee--eCCCC
Q 016916 190 IVSQLHSQKLI-RNVVGHCLSGGG---GGFLFFGDDLY--DSSRVVWTSMSSDYTKYYSPGVAELFFGGETTG--LKNLP 261 (380)
Q Consensus 190 ~~~~l~~~g~i-~~~Fs~~l~~~~---~G~l~~G~~~~--~~g~l~~~pl~~~~~~~w~v~l~~i~vg~~~~~--~~~~~ 261 (380)
++.+|+++|+| +++||+||.+.. .|.|+||+++. +.|++.|+|+.+. .+|.|.|++|+++++.+. .....
T Consensus 136 ~~~~l~~qg~i~~~~Fs~~L~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~~v~l~~i~v~~~~~~~~~~~~~ 213 (329)
T 1htr_B 136 AMQGMVQEGALTSPVFSVYLSNQQGSSGGAVVFGGVDSSLYTGQIYWAPVTQE--LYWQIGIEEFLIGGQASGWCSEGCQ 213 (329)
T ss_dssp HHHHHHHTTCSSSSEEEEEECSSCSSEEEEEEESSCCGGGEEEEEEEEEBCSS--SSCEEEECEEEETTEECCTTTTCEE
T ss_pred HHHHHHhcCCCCCCEEEEEEcCCCCCCCcEEEEcccCHHHcCCceEEEECCCC--ceEEEEEeEEEECCceeeecCCCce
Confidence 67889999999 999999998643 89999999875 4689999999876 799999999999998865 23468
Q ss_pred EEEcccccceeeCHHHHHHHHHHHHHHhccCCCccCCCCCCcCcccccccCCccccccccccceEEEEEecCCCCeEEEE
Q 016916 262 VVFDSGSSYTYLNRVTYQTLTSIMKKELSAKSLKEAPEDETLPLCWKGRRPFKNVHDVKKCFRTLALSFTDGKTRTLFEL 341 (380)
Q Consensus 262 aiiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~l~f~f~g~~~~~~~~l 341 (380)
+||||||++++||+++|++|.+++.+... . ......+|+.. ..+|+|+|+|+| ++++|
T Consensus 214 aiiDSGTt~~~lp~~~~~~l~~~~~~~~~-----~--~g~~~~~C~~~-----------~~~P~i~f~f~g----~~~~i 271 (329)
T 1htr_B 214 AIVDTGTSLLTVPQQYMSALLQATGAQED-----E--YGQFLVNCNSI-----------QNLPSLTFIING----VEFPL 271 (329)
T ss_dssp EEECTTCCSEEEEGGGHHHHHHHHTCEEC-----T--TSCEEECGGGG-----------GGSCCEEEEETT----EEEEE
T ss_pred EEEecCCccEECCHHHHHHHHHHhCCeec-----C--CCeEEEeCCCc-----------ccCCcEEEEECC----EEEEE
Confidence 99999999999999999999998854321 1 11233579864 258999999975 99999
Q ss_pred cCCeEEEEeCCCeEEE-EEEeCCcC-CCCC-eeEEcccc
Q 016916 342 TPEAYLIISNKGNVCL-GILNGAEV-GLQD-LNVIGGIG 377 (380)
Q Consensus 342 ~~~~y~~~~~~~~~C~-~~~~~~~~-~~~~-~~IlG~~~ 377 (380)
++++|+++.. + .|+ ++...... ..++ .||||+++
T Consensus 272 ~~~~y~~~~~-g-~C~~~~~~~~~~~~~~~~~~iLG~~f 308 (329)
T 1htr_B 272 PPSSYILSNN-G-YCTVGVEPTYLSSQNGQPLWILGDVF 308 (329)
T ss_dssp CHHHHEEECS-S-CEEESEEEECCCCTTSSCEEEECHHH
T ss_pred CHHHhcccCC-C-EEEEEEEECCCCCCCCCceEEEChHH
Confidence 9999999866 4 899 56543311 1234 89999975
No 14
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=2.1e-48 Score=371.80 Aligned_cols=284 Identities=17% Similarity=0.302 Sum_probs=228.2
Q ss_pred EEEEEecCCCCCeeEEEEEEecCCCcEEEEEEEcCCCceEEeCCCCC--CCCCCCCCCCCCCCCCCCCCCCccccCcCCC
Q 016916 37 LLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPC--VRCVEAPHPLYRPSNDLVPCEDPICASLHAP 114 (380)
Q Consensus 37 ~~lpl~~~~~~~~~y~~~i~vGtP~Q~~~v~~DTGSs~~wv~~~~~c--~~C~~~~~~~f~p~~S~~~c~~~~c~~~~~~ 114 (380)
..+||.. +.+.+|+++|.||||||++.|+|||||+++||+|. +| ..|. .++.|+|++|+ +++.
T Consensus 4 ~~~~l~n--~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~-~C~~~~C~--~~~~y~~~~Ss------T~~~---- 68 (323)
T 3cms_A 4 ASVPLTN--YLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSI-YCKSNACK--NHQRFDPRKSS------TFQN---- 68 (323)
T ss_dssp EEEEEEE--ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSHHHH--TSCCBCGGGCT------TCEE----
T ss_pred ceeeeEe--ccCCEEEEEEEECCCCeEEEEEEeCCccceEEcCC-CCCccccc--CCCCCCCccCC------CeEE----
Confidence 4567774 34679999999999999999999999999999999 89 4686 47899999884 1221
Q ss_pred CCCCCCCCCCCceeEEeCCCCeEEEEEEEEEEEEeecCCCcCCCceEEeeeEecCCC-CCCCCcceEEeeCCCCC-----
Q 016916 115 GHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPG-ASYHPLDGILGLGKGKS----- 188 (380)
Q Consensus 115 ~~~~c~~~~~~~~~i~Y~~Gs~~~G~l~~D~v~l~~~~g~~~~~~~~FG~~~~~~~~-~~~~~~~GIlGLg~~~~----- 188 (380)
..|.|++.|++| ++.|.+++|+|+|+ +..++++.|||++..... +.....+||||||+...
T Consensus 69 --------~~~~~~i~Yg~G-s~~G~~~~D~v~ig----~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~ 135 (323)
T 3cms_A 69 --------LGKPLSIHYGTG-SMQGILGYDTVTVS----NIVDIQQTVGLSTQEPGDFFTYAEFDGILGMAYPSLASEYS 135 (323)
T ss_dssp --------EEEEEEEEETTE-EEEEEEEEEEEEET----TEEEEEEEEEEEEECCSHHHHHSSCSEEEECSCGGGSCTTC
T ss_pred --------CCcEEEEEeCCC-CeEEEEEEEEEEEC----CeEEeccEEEEEEecccccccccCCceEEecCcchhhccCC
Confidence 367999999999 58999999999995 567789999999886431 22346799999998754
Q ss_pred -chhhhccccccc-cceeeeeecCC-CceeEEECCCCC--CCCCcEEeecccCCCCCeeEEeeEEEECCEEeeeC-CCCE
Q 016916 189 -SIVSQLHSQKLI-RNVVGHCLSGG-GGGFLFFGDDLY--DSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGLK-NLPV 262 (380)
Q Consensus 189 -s~~~~l~~~g~i-~~~Fs~~l~~~-~~G~l~~G~~~~--~~g~l~~~pl~~~~~~~w~v~l~~i~vg~~~~~~~-~~~a 262 (380)
+++.+|+++++| +++||+||.+. ..|.|+||++++ +.|++.|+|+.+. .+|.|.|++|+++++.+.+. ...+
T Consensus 136 ~~~~~~l~~q~~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~~v~l~~i~v~~~~~~~~~~~~a 213 (323)
T 3cms_A 136 IPVFDNMMNRHLVAQDLFSVYMDRNGQESMLTLGAIDPSYYTGSLHWVPVTVQ--QYWQFTVDSVTISGVVVACEGGCQA 213 (323)
T ss_dssp CCHHHHHHHTTCSSSSEEEEECCTTSSCEEEEESCCCGGGEEEEEEEEECSSB--TTBEEEEEEEEETTEEEESTTCEEE
T ss_pred CCHHHHHHHCCCCCCCEEEEEECCCCCCEEEEECCCChhhccCceEEEECccC--CeEEEEEeeEEECCEEeecCCCcEE
Confidence 467889999999 99999999853 459999999875 4689999999876 69999999999999987643 4689
Q ss_pred EEcccccceeeCHHHHHHHHHHHHHHhccCCCccCCCCCCcCcccccccCCccccccccccceEEEEEecCCCCeEEEEc
Q 016916 263 VFDSGSSYTYLNRVTYQTLTSIMKKELSAKSLKEAPEDETLPLCWKGRRPFKNVHDVKKCFRTLALSFTDGKTRTLFELT 342 (380)
Q Consensus 263 iiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~l~f~f~g~~~~~~~~l~ 342 (380)
||||||++++||++++++|.+++.+... . ......+|+... .+|+|+|+|+| ++++|+
T Consensus 214 iiDSGTt~~~lP~~~~~~l~~~~~~~~~------~-~g~~~~~C~~~~-----------~~P~i~f~f~g----~~~~i~ 271 (323)
T 3cms_A 214 ILDTGTSKLVGPSSDILNIQQAIGATQN------Q-YGEFDIDCDNLS-----------YMPTVVFEING----KMYPLT 271 (323)
T ss_dssp EECTTCCSEEECHHHHHHHHHHHTCEEE------T-TTEEEECTTCTT-----------TSCCEEEEETT----EEEEEC
T ss_pred EEecCCccEeCCHHHHHHHHHHhCCeec------C-CCcEEEECCCCc-----------cCceEEEEECC----EEEEEC
Confidence 9999999999999999999998854211 1 112234687642 48999999975 999999
Q ss_pred CCeEEEEeCCCeEEEE-EEeCCcCCCCCeeEEcccc
Q 016916 343 PEAYLIISNKGNVCLG-ILNGAEVGLQDLNVIGGIG 377 (380)
Q Consensus 343 ~~~y~~~~~~~~~C~~-~~~~~~~~~~~~~IlG~~~ 377 (380)
+++|+++ .+..|+. +.... ..+.||||+++
T Consensus 272 ~~~y~~~--~~~~C~~~i~~~~---~~~~~iLG~~f 302 (323)
T 3cms_A 272 PSAYTSQ--DQGFCTSGFQSEN---HSQKWILGDVF 302 (323)
T ss_dssp HHHHEEE--ETTEEEESEEEC------CCEEECHHH
T ss_pred HHHhccC--CCCEEEEEEEeCC---CCCcEEECHHH
Confidence 9999998 3468984 66543 13579999974
No 15
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=6.2e-48 Score=370.25 Aligned_cols=278 Identities=19% Similarity=0.289 Sum_probs=226.0
Q ss_pred eEEEEEecCCCCCeeEEEEEEecCCCcEEEEEEEcCCCceEEeCCC-CCCC---------CCCCCCCCCCCCCCCCCCCC
Q 016916 36 SLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDA-PCVR---------CVEAPHPLYRPSNDLVPCED 105 (380)
Q Consensus 36 ~~~lpl~~~~~~~~~y~~~i~vGtP~Q~~~v~~DTGSs~~wv~~~~-~c~~---------C~~~~~~~f~p~~S~~~c~~ 105 (380)
++.+||... +.+|+++|.||||||++.|+|||||+++||+|.. +|.. |. .++.|+|++|+
T Consensus 2 ~~~~~l~~~---~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~--~~~~y~~~~Ss----- 71 (334)
T 1j71_A 2 DVPTTLINE---GPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCK--QEGTFDPSSSS----- 71 (334)
T ss_dssp CEEEEEEEC---SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGG--SSCCBCGGGCT-----
T ss_pred ceeEEEecC---CcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCccccccccccc--CCCcCCcccCC-----
Confidence 478899854 5689999999999999999999999999998541 3543 43 46789998874
Q ss_pred ccccCcCCCCCCCCCCCCCCceeEEeCCCCeEEEEEEEEEEEEeecCCCcCCCceEEeeeEecCCCCCCCCcceEEeeCC
Q 016916 106 PICASLHAPGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPGASYHPLDGILGLGK 185 (380)
Q Consensus 106 ~~c~~~~~~~~~~c~~~~~~~~~i~Y~~Gs~~~G~l~~D~v~l~~~~g~~~~~~~~FG~~~~~~~~~~~~~~~GIlGLg~ 185 (380)
+++. ..|.|.+.|++|+.+.|.+++|+|+|+ +..++++.|||++... ..+||||||+
T Consensus 72 -T~~~------------~~~~~~i~Yg~Gs~~~G~~~~D~v~~g----~~~~~~~~fg~~~~~~------~~~GilGLg~ 128 (334)
T 1j71_A 72 -SAQN------------LNQDFSIEYGDLTSSQGSFYKDTVGFG----GISIKNQQFADVTTTS------VDQGIMGIGF 128 (334)
T ss_dssp -TCEE------------EEEEEEEEBTTSCEEEEEEEEEEEEET----TEEEEEEEEEEEEEES------SSSCEEECSC
T ss_pred -Cccc------------CCCceEEEECCCCEEEEEEEEEEEEEC----CEEEccEEEEEEEecC------CCccEEEEcC
Confidence 1111 367999999999888999999999995 4678899999998762 4799999999
Q ss_pred CCC--------chhhhccccccc-cceeeeeecC--CCceeEEECCCCC--CCCCcEEeecccCCCCCeeEEeeEEEECC
Q 016916 186 GKS--------SIVSQLHSQKLI-RNVVGHCLSG--GGGGFLFFGDDLY--DSSRVVWTSMSSDYTKYYSPGVAELFFGG 252 (380)
Q Consensus 186 ~~~--------s~~~~l~~~g~i-~~~Fs~~l~~--~~~G~l~~G~~~~--~~g~l~~~pl~~~~~~~w~v~l~~i~vg~ 252 (380)
... +++.+|+++|+| +++||+||.+ ...|.|+||+++. +.|++.|+|+.+. .+|.|.|++|++++
T Consensus 129 ~~~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~~v~l~~i~v~g 206 (334)
T 1j71_A 129 TADEAGYNLYDNVPVTLKKQGIINKNAYSLYLNSEDASTGKIIFGGVDNAKYTGTLTALPVTSS--VELRVHLGSINFDG 206 (334)
T ss_dssp GGGSSTTCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSEEEEEEEEECCCS--SSCEEEEEEEEETT
T ss_pred CcccCccccCCcHHHHHHHCCCCCccEEEEEeCCCCCCCeEEEEeeechHHccCceEEEEccCC--CeEEEEEeEEEECC
Confidence 754 788999999999 8999999975 4689999999864 4689999999987 59999999999999
Q ss_pred EEeeeCCCCEEEcccccceeeCHHHHHHHHHHHHHHhccCCCccCCCCCCc-CcccccccCCccccccccccceEEEEEe
Q 016916 253 ETTGLKNLPVVFDSGSSYTYLNRVTYQTLTSIMKKELSAKSLKEAPEDETL-PLCWKGRRPFKNVHDVKKCFRTLALSFT 331 (380)
Q Consensus 253 ~~~~~~~~~aiiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~-~~C~~~~~~~~~~~~~~~~~P~l~f~f~ 331 (380)
+.+.. ...+||||||++++||+++|++|.+++.++.. .. ..... .+|+. +|+|+|+|.
T Consensus 207 ~~~~~-~~~~iiDSGTt~~~lP~~~~~~l~~~~~~~~~-----~~-~~~~~~~~C~~--------------~p~i~f~f~ 265 (334)
T 1j71_A 207 TSVST-NADVVLDSGTTITYFSQSTADKFARIVGATWD-----SR-NEIYRLPSCDL--------------SGDAVFNFD 265 (334)
T ss_dssp EEEEE-EEEEEECTTCSSEEECHHHHHHHHHHHTCEEE-----TT-TTEEECSSSCC--------------CSEEEEEES
T ss_pred EeccC-CccEEEeCCCCcEecCHHHHHHHHHHcCCccc-----CC-CceEEEEcCCC--------------CCceEEEEc
Confidence 98864 46799999999999999999999999976542 11 11222 56853 689999996
Q ss_pred cCCCCeEEEEcCCeEEEEeCCCeEEEEEEeCCcCCCCCeeEEcccc
Q 016916 332 DGKTRTLFELTPEAYLIISNKGNVCLGILNGAEVGLQDLNVIGGIG 377 (380)
Q Consensus 332 g~~~~~~~~l~~~~y~~~~~~~~~C~~~~~~~~~~~~~~~IlG~~~ 377 (380)
| +++++|++++|+++..++..|+..+... +.||||+++
T Consensus 266 ~---g~~~~i~~~~y~~~~~~~~~C~~~i~~~-----~~~iLG~~f 303 (334)
T 1j71_A 266 Q---GVKITVPLSELILKDSDSSICYFGISRN-----DANILGDNF 303 (334)
T ss_dssp T---TCEEEEEGGGGEEECSSSSCEEESEEEC-----TTCEECHHH
T ss_pred C---CcEEEECHHHheeecCCCCeeEEEEeEC-----CCcEEChHh
Confidence 5 5999999999999875555698644433 258999875
No 16
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=2.6e-48 Score=370.66 Aligned_cols=284 Identities=19% Similarity=0.325 Sum_probs=226.3
Q ss_pred EEEecCCCCCeeEEEEEEecCCCcEEEEEEEcCCCceEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCcCCCCCCC
Q 016916 39 FQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAPGHHN 118 (380)
Q Consensus 39 lpl~~~~~~~~~y~~~i~vGtP~Q~~~v~~DTGSs~~wv~~~~~c~~C~~~~~~~f~p~~S~~~c~~~~c~~~~~~~~~~ 118 (380)
.||.. +.+.+|+++|+||||||+++|+|||||+++||+|. +|..|.+..++.|+|++|+ +++.
T Consensus 3 ~~l~n--~~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~-~C~~~~C~~~~~y~~~~Ss------T~~~-------- 65 (320)
T 4aa9_A 3 EPLTS--YLDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSI-YCKSNVCKNHHRFDPRKSS------TFRN-------- 65 (320)
T ss_dssp -------CCCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSHHHHTSCCBCGGGCT------TCEE--------
T ss_pred cccee--ccCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCC-CCCccccCCCCCCCCCCCc------CeEc--------
Confidence 35553 34678999999999999999999999999999999 8984333357899999884 1111
Q ss_pred CCCCCCCceeEEeCCCCeEEEEEEEEEEEEeecCCCcCCCceEEeeeEecCCC-CCCCCcceEEeeCCCC------Cchh
Q 016916 119 CEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPG-ASYHPLDGILGLGKGK------SSIV 191 (380)
Q Consensus 119 c~~~~~~~~~i~Y~~Gs~~~G~l~~D~v~l~~~~g~~~~~~~~FG~~~~~~~~-~~~~~~~GIlGLg~~~------~s~~ 191 (380)
..|.|.+.|++| ++.|.+++|+|+|+ +..++++.|||++..... +.....+||||||+.. .+++
T Consensus 66 ----~~~~~~i~Yg~g-s~~G~~~~D~v~ig----~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~ 136 (320)
T 4aa9_A 66 ----LGKPLSIHYGTG-SMEGFLGYDTVTVS----NIVDPNQTVGLSTEQPGEVFTYSEFDGILGLAYPSLASEYSVPVF 136 (320)
T ss_dssp ----EEEEEEEEETTE-EEEEEEEEEEEEET----TEEEEEEEEEEEEECCSHHHHSCCCSEEEECSCGGGSCTTCCCHH
T ss_pred ----CCcEEEEEECCc-EEEEEEEEEEEEEC----CEeecCeEEEEEEEcccccccccCcccEEecCcccccccCCCCHH
Confidence 357999999999 58999999999995 567889999999887432 3345679999999874 3578
Q ss_pred hhccccccc-cceeeeeecC-CCceeEEECCCCC--CCCCcEEeecccCCCCCeeEEeeEEEECCEEeeeC-CCCEEEcc
Q 016916 192 SQLHSQKLI-RNVVGHCLSG-GGGGFLFFGDDLY--DSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGLK-NLPVVFDS 266 (380)
Q Consensus 192 ~~l~~~g~i-~~~Fs~~l~~-~~~G~l~~G~~~~--~~g~l~~~pl~~~~~~~w~v~l~~i~vg~~~~~~~-~~~aiiDS 266 (380)
.+|+++|+| +++||+||.+ ...|.|+||+++. +.|++.|+|+... .+|.|.+++|+++++.+... ...+||||
T Consensus 137 ~~l~~~g~i~~~~Fs~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~w~v~l~~i~v~~~~~~~~~~~~~iiDs 214 (320)
T 4aa9_A 137 DNMMDRHLVARDLFSVYMDRNGQGSMLTLGAIDPSYYTGSLHWVPVTLQ--QYWQFTVDSVTINGVAVACVGGCQAILDT 214 (320)
T ss_dssp HHHHHTTCSSSSEEEEECCSSSSCCEEEETCCCGGGEEEEEEEEECSSB--TTBEEEECEEEETTEEEESTTCEEEEECT
T ss_pred HHHHhCCCCCCceEEEEeCCCCCCeEEEEcccCHHHccCceEEEEcccC--CceEEEEeEEEECCEEeccCCCcEEEEEC
Confidence 899999999 9999999987 4789999999875 5699999999876 69999999999999988753 46899999
Q ss_pred cccceeeCHHHHHHHHHHHHHHhccCCCccCCCCCCcCcccccccCCccccccccccceEEEEEecCCCCeEEEEcCCeE
Q 016916 267 GSSYTYLNRVTYQTLTSIMKKELSAKSLKEAPEDETLPLCWKGRRPFKNVHDVKKCFRTLALSFTDGKTRTLFELTPEAY 346 (380)
Q Consensus 267 GTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~l~f~f~g~~~~~~~~l~~~~y 346 (380)
||++++||++++++|.+++.+... . ......+|+.. ..+|+|+|+|+| ++++|++++|
T Consensus 215 Gtt~~~lP~~~~~~i~~~~~~~~~------~-~g~~~~~C~~~-----------~~~p~i~f~f~g----~~~~l~~~~y 272 (320)
T 4aa9_A 215 GTSVLFGPSSDILKIQMAIGATEN------R-YGEFDVNCGNL-----------RSMPTVVFEING----RDYPLSPSAY 272 (320)
T ss_dssp TCSSEEEEHHHHHHHHHHTTCEEC------T-TSCEEECGGGG-----------GGCCCEEEEETT----EEEEECHHHH
T ss_pred CCCcEECCHHHHHHHHHHhCCccc------C-CCcEEEeCCCC-----------CcCceEEEEECC----EEEEECHHHh
Confidence 999999999999999988854321 1 12233578764 358999999986 9999999999
Q ss_pred EEEeCCCeEEEE-EEeCCcCCCCCeeEEcccc
Q 016916 347 LIISNKGNVCLG-ILNGAEVGLQDLNVIGGIG 377 (380)
Q Consensus 347 ~~~~~~~~~C~~-~~~~~~~~~~~~~IlG~~~ 377 (380)
+.+ .+..|+. +.... .++.||||+.+
T Consensus 273 ~~~--~~~~C~~~i~~~~---~~~~~ilG~~f 299 (320)
T 4aa9_A 273 TSK--DQGFCTSGFQGDN---NSELWILGDVF 299 (320)
T ss_dssp EEE--ETTEEEESEEEET---TCCCEEECHHH
T ss_pred ccC--CCCeEEEEEEcCC---CCCcEEEChHH
Confidence 976 3457984 65532 23579999875
No 17
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=2.5e-47 Score=367.17 Aligned_cols=281 Identities=19% Similarity=0.308 Sum_probs=225.1
Q ss_pred eEEEEEecCCCCCeeEEEEEEecCCCcEEEEEEEcCCCceEEeCCC-CCC---------CCCCCCCCCCCCCCCCCCCCC
Q 016916 36 SLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDA-PCV---------RCVEAPHPLYRPSNDLVPCED 105 (380)
Q Consensus 36 ~~~lpl~~~~~~~~~y~~~i~vGtP~Q~~~v~~DTGSs~~wv~~~~-~c~---------~C~~~~~~~f~p~~S~~~c~~ 105 (380)
++.+||... +.+|+++|.||||+|++.|+|||||+++||+|.. +|. .|. .++.|+|++|+
T Consensus 2 ~v~~~l~~~---~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~--~~~~y~~~~Ss----- 71 (342)
T 2qzx_A 2 PVAVTLHNE---AITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFCK--SAGSYSPASSR----- 71 (342)
T ss_dssp CEEEEEEEC---SSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGGG--TTCCBCGGGCT-----
T ss_pred ceeEEEecC---CeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCcccccc--CCCcCCcccCC-----
Confidence 467888853 5689999999999999999999999999998541 354 343 46789998874
Q ss_pred ccccCcCCCCCCCCCCCCCCceeEEeCCCCeEEEEEEEEEEEEeecCCCcCCCceEEeeeEecCCCCCCCCcceEEeeCC
Q 016916 106 PICASLHAPGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPGASYHPLDGILGLGK 185 (380)
Q Consensus 106 ~~c~~~~~~~~~~c~~~~~~~~~i~Y~~Gs~~~G~l~~D~v~l~~~~g~~~~~~~~FG~~~~~~~~~~~~~~~GIlGLg~ 185 (380)
+++. ..|.|.+.|++|+.+.|.+++|+|+|+ +..++++.|||++... ..+||||||+
T Consensus 72 -T~~~------------~~~~~~i~Yg~Gs~~~G~~~~D~v~~g----~~~v~~~~fg~~~~~~------~~~GilGLg~ 128 (342)
T 2qzx_A 72 -TSQN------------LNTRFDIKYGDGSYAKGKLYKDTVGIG----GVSVRDQLFANVWSTS------ARKGILGIGF 128 (342)
T ss_dssp -TCEE------------EEEEEEEECTTSCEEEEEEEEEEEEET----TEEEEEEEEEEEEEEC------SSSCEEECSC
T ss_pred -Cccc------------CCCcEEEEeCCCCeEEEEEEEEEEEEC----CEEecceEEEEEEecC------CCcCEEEEcc
Confidence 1111 367999999999888999999999995 4678899999998762 4799999999
Q ss_pred CCC--------chhhhccccccc-cceeeeeecC--CCceeEEECCCCC--CCCCcEEeecccCCCCCeeEEeeEEEECC
Q 016916 186 GKS--------SIVSQLHSQKLI-RNVVGHCLSG--GGGGFLFFGDDLY--DSSRVVWTSMSSDYTKYYSPGVAELFFGG 252 (380)
Q Consensus 186 ~~~--------s~~~~l~~~g~i-~~~Fs~~l~~--~~~G~l~~G~~~~--~~g~l~~~pl~~~~~~~w~v~l~~i~vg~ 252 (380)
... +++.+|+++|+| +++||+||.+ ...|.|+||+++. +.|++.|+|+.+. .+|.|.|++|++++
T Consensus 129 ~~~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~~v~l~~i~v~g 206 (342)
T 2qzx_A 129 QSGEATEFDYDNLPISLRNQGIIGKAAYSLYLNSAEASTGQIIFGGIDKAKYSGSLVDLPITSE--KKLTVGLRSVNVRG 206 (342)
T ss_dssp GGGCSSSSCCCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCCS--SSCEEEEEEEEETT
T ss_pred ccccCCCccCccHHHHHHHCCCcCccEEEEEeCCCCCCCeEEEECccchhhEecceEEEeccCC--ceEEEEEeEEEECC
Confidence 754 788899999999 8999999975 4689999999864 5799999999987 59999999999999
Q ss_pred EEeeeCCCCEEEcccccceeeCHHHHHHHHHHHHHHhccCCCccCCCCCCcCcccccccCCccccccccccceEEEEEec
Q 016916 253 ETTGLKNLPVVFDSGSSYTYLNRVTYQTLTSIMKKELSAKSLKEAPEDETLPLCWKGRRPFKNVHDVKKCFRTLALSFTD 332 (380)
Q Consensus 253 ~~~~~~~~~aiiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~l~f~f~g 332 (380)
+.+.. ...+||||||++++||+++|++|.+++.++... ..........+|+. +|+|+|+|+|
T Consensus 207 ~~~~~-~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~---~~~~~~~~~~~C~~--------------~p~i~f~f~~ 268 (342)
T 2qzx_A 207 RNVDA-NTNVLLDSGTTISYFTRSIVRNILYAIGAQMKF---DSAGNKVYVADCKT--------------SGTIDFQFGN 268 (342)
T ss_dssp EEEEE-EEEEEECTTCSSEEECHHHHHHHHHHHTCEEEE---CTTSCEEEEECTTC--------------CCEEEEEETT
T ss_pred EecCC-CcCEEEeCCCCCEEcCHHHHHHHHHHhCCeeee---ccCCCcEEEEECCC--------------CCcEEEEECC
Confidence 98864 467999999999999999999999999765431 11111122346753 6899999965
Q ss_pred CCCCeEEEEcCCeEEEEeC-----CCeEEEEEEeCCcCCCCCeeEEcccc
Q 016916 333 GKTRTLFELTPEAYLIISN-----KGNVCLGILNGAEVGLQDLNVIGGIG 377 (380)
Q Consensus 333 ~~~~~~~~l~~~~y~~~~~-----~~~~C~~~~~~~~~~~~~~~IlG~~~ 377 (380)
+++++|++++|+++.. .+..|++.+... +.||||+++
T Consensus 269 ---g~~~~i~~~~~~~~~~~~~~~~~~~C~~~i~~~-----~~~iLG~~f 310 (342)
T 2qzx_A 269 ---NLKISVPVSEFLFQTYYTSGKPFPKCEVRIRES-----EDNILGDNF 310 (342)
T ss_dssp ---TEEEEEEGGGGEECCBCTTSCBCSSEEESEEEC-----SSCEECHHH
T ss_pred ---CcEEEEcHHHhcccccccCCCCCCccEEEEecC-----CCcEeChHh
Confidence 5999999999999742 235799655433 258999875
No 18
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=5.8e-47 Score=362.14 Aligned_cols=277 Identities=17% Similarity=0.254 Sum_probs=223.1
Q ss_pred CCeeEEEEEEecCCCcEEEEEEEcCCCceEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCcCCCCCCCCCCCCCCc
Q 016916 47 PTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAPGHHNCEDPAQCD 126 (380)
Q Consensus 47 ~~~~y~~~i~vGtP~Q~~~v~~DTGSs~~wv~~~~~c~~C~~~~~~~f~p~~S~~~c~~~~c~~~~~~~~~~c~~~~~~~ 126 (380)
.+.+|+++|+|| ||++.|+|||||+++||+|. +|..|.++.++.|+|++|+ + + .+.|.
T Consensus 12 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~-~C~~~~c~~~~~y~~~~Ss--~-----~------------~~~~~ 69 (325)
T 1ibq_A 12 NDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSD-ELPSSEQTGHDLYTPSSSA--T-----K------------LSGYS 69 (325)
T ss_dssp TTSCEEEEEEEB--TEEEEEEEETTCCCEEEECT-TSCHHHHTTSCCCBCCSSC--E-----E------------CTTCB
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCccceEeeC-CCCccccCCCCCCCchhcC--C-----c------------cCCCE
Confidence 456899999999 89999999999999999999 9998776678999999884 1 1 13679
Q ss_pred eeEEeCCCCeEEEEEEEEEEEEeecCCCcCCCceEEeeeEecCCC-CCCCCcceEEeeCCCCCc---------hhhhccc
Q 016916 127 YELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPG-ASYHPLDGILGLGKGKSS---------IVSQLHS 196 (380)
Q Consensus 127 ~~i~Y~~Gs~~~G~l~~D~v~l~~~~g~~~~~~~~FG~~~~~~~~-~~~~~~~GIlGLg~~~~s---------~~~~l~~ 196 (380)
|++.|++|+.+.|.+++|+|+|+ +..++++.|||++..... +.....+||||||+...+ ++++|++
T Consensus 70 ~~i~Yg~Gs~~~G~~~~D~v~ig----~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~~ 145 (325)
T 1ibq_A 70 WDISYGDGSSASGDVYRDTVTVG----GVTTNKQAVEAASKISSEFVQDTANDGLLGLAFSSINTVQPKAQTTFFDTVKS 145 (325)
T ss_dssp EEEECSSSCEEEEEEEEEEEEET----TEEEEEEEEEEEEEECHHHHTSTTCCEEEECSCGGGCCCBSSCCCCHHHHHGG
T ss_pred EEEEeCCCCEEEEEEEEeEEEEC----CEEEcceEEEEEEecCccccccCCCceEEEeCcccccccCcCCCCCHHHHHHH
Confidence 99999999779999999999995 567889999999986432 222468999999997544 5678887
Q ss_pred cccc-cceeeeeecCCCceeEEECCCCC--CCCCcEEeecccCCCCCeeEEeeEEEECCEEeeeCCCCEEEcccccceee
Q 016916 197 QKLI-RNVVGHCLSGGGGGFLFFGDDLY--DSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGLKNLPVVFDSGSSYTYL 273 (380)
Q Consensus 197 ~g~i-~~~Fs~~l~~~~~G~l~~G~~~~--~~g~l~~~pl~~~~~~~w~v~l~~i~vg~~~~~~~~~~aiiDSGTs~~~l 273 (380)
+ + +++||+||.++..|.|+||++++ +.|++.|+|+.... .+|.|.|++|+++++.+......+||||||++++|
T Consensus 146 ~--i~~~~FS~~l~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~-~~w~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~l 222 (325)
T 1ibq_A 146 Q--LDSPLFAVQLKHDAPGVYDFGYIDDSKYTGSITYTDADSSQ-GYWGFSTDGYSIGDGSSSSSGFSAIADTGTTLILL 222 (325)
T ss_dssp G--SSSSEEEEEEETTEEEEEEESSCCGGGBSSCCEEEECBCTT-SSCEEEECEEEETTSCCBSCCEEEEECTTCCSEEE
T ss_pred h--cCCcEEEEEecCCCCceEEECCcChhhccCceEEEEcCCCC-ceEEEEECcEEECCeeccCCCceEEEeCCCCcEeC
Confidence 6 6 89999999877799999999874 57999999998543 79999999999999877655678999999999999
Q ss_pred CHHHHHHHHHHHHHHhccCCCccCCCCCCcCcccccccCCccccccccccceEEEEEecCCCCeEEEEcCCeEEEEeCC-
Q 016916 274 NRVTYQTLTSIMKKELSAKSLKEAPEDETLPLCWKGRRPFKNVHDVKKCFRTLALSFTDGKTRTLFELTPEAYLIISNK- 352 (380)
Q Consensus 274 p~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~l~f~f~g~~~~~~~~l~~~~y~~~~~~- 352 (380)
|+++|++|.+++.++.. ... ......+|+. .+|+|+|+|+| ++++||+++|++...+
T Consensus 223 P~~~~~~i~~~i~~a~~----~~~-~g~~~~~C~~-------------~~P~i~f~fgg----~~~~i~~~~~~~~~~~~ 280 (325)
T 1ibq_A 223 DDEIVSAYYEQVSGAQE----SYE-AGGYVFSCST-------------DLPDFTVVIGD----YKAVVPGKYINYAPVST 280 (325)
T ss_dssp CHHHHHHHHTTSTTCBC----CSS-SSSCEEETTC-------------CCCCEEEEETT----EEEEECHHHHEEEESST
T ss_pred CHHHHHHHHHhCCCceE----cCc-CCeEEEEcCC-------------CCCcEEEEECC----EEEEECHHHhcccccCC
Confidence 99999999888743321 111 1122346873 37999999975 9999999999987633
Q ss_pred C-eEEEE-EEeCCcCCCCCeeEEcccc
Q 016916 353 G-NVCLG-ILNGAEVGLQDLNVIGGIG 377 (380)
Q Consensus 353 ~-~~C~~-~~~~~~~~~~~~~IlG~~~ 377 (380)
+ ..|++ +.... ..+.||||+++
T Consensus 281 ~~~~C~~~i~~~~---~~~~~iLG~~f 304 (325)
T 1ibq_A 281 GSSTCYGGIQSNS---GLGLSILGDVF 304 (325)
T ss_dssp TCSEEEESEEECT---TTCSEEECHHH
T ss_pred CCCeEEEEEEcCC---CCCceEEChHH
Confidence 3 68996 44432 13579999975
No 19
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=1.1e-47 Score=373.73 Aligned_cols=281 Identities=19% Similarity=0.279 Sum_probs=228.1
Q ss_pred EEEEecCCCCCeeEEEEEEecCCCcEEEEEEEcCCCceEEeCCCCCC--CCCCCCCCCCCCCCCCCCCCCccccCcCCCC
Q 016916 38 LFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCV--RCVEAPHPLYRPSNDLVPCEDPICASLHAPG 115 (380)
Q Consensus 38 ~lpl~~~~~~~~~y~~~i~vGtP~Q~~~v~~DTGSs~~wv~~~~~c~--~C~~~~~~~f~p~~S~~~c~~~~c~~~~~~~ 115 (380)
.+||.. +.+.+|+++|.||||||++.|+|||||+++||+|. +|. .|. .++.|+|++|+ +++.
T Consensus 53 ~~pl~~--~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~-~C~~~~C~--~~~~y~~~~Ss------T~~~----- 116 (375)
T 1miq_A 53 VIELDD--VANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSK-KCNSSGCS--IKNLYDSSKSK------SYEK----- 116 (375)
T ss_dssp CCCGGG--TBCEEEECCCEETTTTEECCEEEETTCCCEEEEBT-TCCSSGGG--GSCCBCGGGCT------TCEE-----
T ss_pred eEEccc--CCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccC-CCCccccc--CCCcCCCccCC------ceEE-----
Confidence 467774 35789999999999999999999999999999999 897 565 47899998884 1221
Q ss_pred CCCCCCCCCCceeEEeCCCCeEEEEEEEEEEEEeecCCCcCCCceEEeeeEe----cCCCCCCCCcceEEeeCCCCC---
Q 016916 116 HHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYN----QVPGASYHPLDGILGLGKGKS--- 188 (380)
Q Consensus 116 ~~~c~~~~~~~~~i~Y~~Gs~~~G~l~~D~v~l~~~~g~~~~~~~~FG~~~~----~~~~~~~~~~~GIlGLg~~~~--- 188 (380)
.+|.|.+.|++| ++.|.+++|+|+|+ +..+++ .|||++. .. .+.....+||||||+...
T Consensus 117 -------~~~~~~i~Yg~G-s~~G~~~~Dtv~ig----~~~v~~-~Fg~~~~~~~~~~-~f~~~~~dGilGLg~~~~s~~ 182 (375)
T 1miq_A 117 -------DGTKVDITYGSG-TVKGFFSKDLVTLG----HLSMPY-KFIEVTDTDDLEP-IYSSVEFDGILGLGWKDLSIG 182 (375)
T ss_dssp -------EEEEEEEEETTE-EEEEEEEEEEEEET----TEEEEE-EEEEEEECGGGTT-HHHHSCCCEEEECSSCCTTCS
T ss_pred -------CCcEEEEEeCCC-eEEEEEEEEEEEEc----CceECc-EEEEEEecccccc-ccccCCCceEEeCCCCccccc
Confidence 367999999999 48999999999995 466788 9999998 42 222346799999999864
Q ss_pred ---chhhhccccccc-cceeeeeecCC--CceeEEECCCCC--CCCCcEEeecccCCCCCeeEEeeEEEECCEEeeeCCC
Q 016916 189 ---SIVSQLHSQKLI-RNVVGHCLSGG--GGGFLFFGDDLY--DSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGLKNL 260 (380)
Q Consensus 189 ---s~~~~l~~~g~i-~~~Fs~~l~~~--~~G~l~~G~~~~--~~g~l~~~pl~~~~~~~w~v~l~~i~vg~~~~~~~~~ 260 (380)
+++.+|++||+| +++||+||.+. ..|.|+|||++. +.|++.|+|+... .+|+|.++ |+++++.+ ...
T Consensus 183 ~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~w~v~l~-i~v~g~~~--~~~ 257 (375)
T 1miq_A 183 SIDPIVVELKNQNKIDNALFTFYLPVHDVHAGYLTIGGIEEKFYEGNITYEKLNHD--LYWQIDLD-VHFGKQTM--EKA 257 (375)
T ss_dssp SCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEEBSSS--SSSEEEEE-EEETTEEE--EEE
T ss_pred CCCCHHHHHHhccCcCCCEEEEEecCCCCCCeEEEEcccCHHHcCCceEEEecCCC--ceEEEEEE-EEECCEEc--ccc
Confidence 467889999999 89999999864 589999999875 4699999999875 79999999 99999987 467
Q ss_pred CEEEcccccceeeCHHHHHHHHHHHHHHhccCCCccCCCCCCcCcccccccCCccccccccccceEEEEEecCCCCeEEE
Q 016916 261 PVVFDSGSSYTYLNRVTYQTLTSIMKKELSAKSLKEAPEDETLPLCWKGRRPFKNVHDVKKCFRTLALSFTDGKTRTLFE 340 (380)
Q Consensus 261 ~aiiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~l~f~f~g~~~~~~~~ 340 (380)
.+||||||++++||+++|++|.+++.+... .. ......+|+. . .+|+|+|+|+| ++++
T Consensus 258 ~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~-----~~-~g~~~~~C~~-~-----------~~P~i~f~f~g----~~~~ 315 (375)
T 1miq_A 258 NVIVDSGTTTITAPSEFLNKFFANLNVIKV-----PF-LPFYVTTCDN-K-----------EMPTLEFKSAN----NTYT 315 (375)
T ss_dssp EEEECTTBSSEEECHHHHHHHHHHHTCEEC-----TT-SSCEEEETTC-T-----------TCCCEEEECSS----CEEE
T ss_pred eEEecCCCccEEcCHHHHHHHHHHhCCccc-----CC-CCeEEEECCC-C-----------CCCcEEEEECC----EEEE
Confidence 899999999999999999999999865322 11 1123457875 2 48999999986 9999
Q ss_pred EcCCeEEEEeCC--CeEEE-EEEeCCcCCCCCeeEEcccc
Q 016916 341 LTPEAYLIISNK--GNVCL-GILNGAEVGLQDLNVIGGIG 377 (380)
Q Consensus 341 l~~~~y~~~~~~--~~~C~-~~~~~~~~~~~~~~IlG~~~ 377 (380)
|++++|+++... ...|+ ++...... .+.||||+++
T Consensus 316 l~~~~yi~~~~~~g~~~C~~~~~~~~~~--~~~~ILG~~f 353 (375)
T 1miq_A 316 LEPEYYMNPILEVDDTLCMITMLPVDID--SNTFILGDPF 353 (375)
T ss_dssp ECGGGSEEESSSSSCSEEEESEEECCSS--SSEEEECHHH
T ss_pred ECHHHhEeeccCCCCCeEEEEEEECCCC--CCcEEECHHH
Confidence 999999998752 35898 67665421 2589999975
No 20
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=2.2e-47 Score=364.69 Aligned_cols=284 Identities=14% Similarity=0.195 Sum_probs=224.8
Q ss_pred CeEEEEEecCCCCCeeEEEEEEecCCCcEEEEEEEcCCCceEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCcCCC
Q 016916 35 SSLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAP 114 (380)
Q Consensus 35 ~~~~lpl~~~~~~~~~y~~~i~vGtP~Q~~~v~~DTGSs~~wv~~~~~c~~C~~~~~~~f~p~~S~~~c~~~~c~~~~~~ 114 (380)
+....|+. .+.+|+++|+|| ||++.|+|||||+++||+|. +|..|.++.++.|+|++|+ + +
T Consensus 5 ~v~~~~~~----~~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~-~C~~~~c~~~~~y~~~~Ss--~-----~----- 65 (323)
T 1izd_A 5 SVTTNPTS----NDEEYITQVTVG--DDTLGLDFDTGSADLWVFSS-QTPSSERSGHDYYTPGSSA--Q-----K----- 65 (323)
T ss_dssp EEEEEECG----GGCCEEEEEEET--TEEEEEEEETTCCCEEECBT-TSCHHHHTTCCCBCCCTTC--E-----E-----
T ss_pred ceeeeEcC----CCCEEEEEEEEC--CEEEEEEEcCCCcceEEecC-CCCcccccCCCCCCccccC--C-----c-----
Confidence 33344554 345899999999 89999999999999999999 8998766678999999884 1 1
Q ss_pred CCCCCCCCCCCceeEEeCCCCeEEEEEEEEEEEEeecCCCcCCCceEEeeeEecCCC-CCCCCcceEEeeCCCCCc----
Q 016916 115 GHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPG-ASYHPLDGILGLGKGKSS---- 189 (380)
Q Consensus 115 ~~~~c~~~~~~~~~i~Y~~Gs~~~G~l~~D~v~l~~~~g~~~~~~~~FG~~~~~~~~-~~~~~~~GIlGLg~~~~s---- 189 (380)
.+.|.|++.|++|+.+.|.+++|+|+|+ +..++++.|||++..... +.....+||||||+...+
T Consensus 66 -------~~~~~~~i~Yg~Gs~~~G~~~~D~v~ig----~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p 134 (323)
T 1izd_A 66 -------IDGATWSISYGDGSSASGDVYKDKVTVG----GVSYDSQAVESAEKVSSEFTQDTANDGLLGLAFSSINTVQP 134 (323)
T ss_dssp -------EEEEEEEEECTTSCEEEEEEEEEEEEET----TEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBS
T ss_pred -------cCCCeEEEEcCCCCeEEEEEEEEEEEEC----CEEECceEEEEEEeccccccccCCCceEEecCcccccccCC
Confidence 1367999999999779999999999995 567889999999986432 112467999999997544
Q ss_pred -----hhhhccccccc-cceeeeeecCCCceeEEECCCCC--CCCCcEEeecccCCCCCeeEEeeEEEECCEEeeeCCCC
Q 016916 190 -----IVSQLHSQKLI-RNVVGHCLSGGGGGFLFFGDDLY--DSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGLKNLP 261 (380)
Q Consensus 190 -----~~~~l~~~g~i-~~~Fs~~l~~~~~G~l~~G~~~~--~~g~l~~~pl~~~~~~~w~v~l~~i~vg~~~~~~~~~~ 261 (380)
++++|+++ + +++||+||.++..|.|+||++++ +.|++.|+|+.... .+|.|.+++|++++ .+......
T Consensus 135 ~~~~~~~~~l~~~--i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~-~~w~v~l~~i~v~~-~~~~~~~~ 210 (323)
T 1izd_A 135 TPQKTFFDNVKSS--LSEPIFAVALKHNAPGVYDFGYTDSSKYTGSITYTDVDNSQ-GFWGFTADGYSIGS-DSSSDSIT 210 (323)
T ss_dssp SCCCCHHHHHGGG--SSSSEEEEECCTTSCEEEEESSCCTTSEEEEEEEEECBCTT-SSCEEEESEEEETT-EEECCCEE
T ss_pred CCCCCHHHHHHHh--ccCcEEEEEccCCCCCEEEECCcCccccccceEEEECCCCC-ceEEEEECeEEECC-cccCCCce
Confidence 56778776 6 89999999877789999999875 46999999998543 79999999999999 66545678
Q ss_pred EEEcccccceeeCHHHHHHHHHHHHHHhccCCCccCCCCCCcCcccccccCCccccccccccceEEEEEecCCCCeEEEE
Q 016916 262 VVFDSGSSYTYLNRVTYQTLTSIMKKELSAKSLKEAPEDETLPLCWKGRRPFKNVHDVKKCFRTLALSFTDGKTRTLFEL 341 (380)
Q Consensus 262 aiiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~l~f~f~g~~~~~~~~l 341 (380)
+||||||++++||++++++|.+++.++.. ... ......+|+. .+|+|+|+|+| ++++|
T Consensus 211 aiiDSGTs~~~lp~~~~~~i~~~i~ga~~----~~~-~g~~~~~C~~-------------~~P~i~f~fgg----~~~~i 268 (323)
T 1izd_A 211 GIADTGTTLLLLDDSIVDAYYEQVNGASY----DSS-QGGYVFPSSA-------------SLPDFSVTIGD----YTATV 268 (323)
T ss_dssp EEECTTCCSEEECHHHHHHHHTTSTTCEE----ETT-TTEEEEETTC-------------CCCCEEEEETT----EEEEE
T ss_pred EEEeCCCcceeCCHHHHHHHHHhCCCcEE----cCc-CCEEEEECCC-------------CCceEEEEECC----EEEec
Confidence 99999999999999999999888753321 111 1112346863 37999999965 99999
Q ss_pred cCCeEEEEeCCCeEEEE-EEeCCcCCCCCeeEEcccc
Q 016916 342 TPEAYLIISNKGNVCLG-ILNGAEVGLQDLNVIGGIG 377 (380)
Q Consensus 342 ~~~~y~~~~~~~~~C~~-~~~~~~~~~~~~~IlG~~~ 377 (380)
|+++|++...++..|++ +.... ..+.||||+++
T Consensus 269 ~~~~~~~~~~~~~~C~~~i~~~~---~~~~~IlG~~f 302 (323)
T 1izd_A 269 PGEYISFADVGNGQTFGGIQSNS---GIGFSIFGDVF 302 (323)
T ss_dssp CHHHHEEEECSTTEEEESEEECT---TTSSEEECHHH
T ss_pred CHHHeEEecCCCCeEEEEEEcCC---CCCcEEEChHH
Confidence 99999998655678996 55433 13579999975
No 21
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=1.9e-47 Score=367.88 Aligned_cols=290 Identities=17% Similarity=0.252 Sum_probs=233.2
Q ss_pred CCeEEEEEecCCCCCeeEEEEEEecCCCcEEEEEEEcCCCceEEeCCCCCC----CCCCCCCCCCCCCCCCCCCCCcccc
Q 016916 34 GSSLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCV----RCVEAPHPLYRPSNDLVPCEDPICA 109 (380)
Q Consensus 34 ~~~~~lpl~~~~~~~~~y~~~i~vGtP~Q~~~v~~DTGSs~~wv~~~~~c~----~C~~~~~~~f~p~~S~~~c~~~~c~ 109 (380)
.+...+||... .+.+|+++|.||||||+++|+|||||+++||+|. .|. .|. .++.|+|++|+. ++
T Consensus 5 ~~~~~~~l~n~--~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~-~C~~~~~~C~--~~~~y~~~~SsT------~~ 73 (341)
T 3k1w_A 5 NTTSSVILTNY--MDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSS-KCSRLYTACV--YHKLFDASDSSS------YK 73 (341)
T ss_dssp CBCEEEEEEEE--TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TSCTTCHHHH--TSCCBCGGGCTT------CE
T ss_pred CCCccccceEc--cCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccC-CCCCCCCccc--CCCCCCCCcCcC------ee
Confidence 34567888853 4679999999999999999999999999999999 897 575 478999998841 11
Q ss_pred CcCCCCCCCCCCCCCCceeEEeCCCCeEEEEEEEEEEEEeecCCCcCCCceEEeeeEecCCC-CCCCCcceEEeeCCCCC
Q 016916 110 SLHAPGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPG-ASYHPLDGILGLGKGKS 188 (380)
Q Consensus 110 ~~~~~~~~~c~~~~~~~~~i~Y~~Gs~~~G~l~~D~v~l~~~~g~~~~~~~~FG~~~~~~~~-~~~~~~~GIlGLg~~~~ 188 (380)
...|.|.+.|++| ++.|.+++|+|+|+ +..+ ++.|||++..... +.....+||||||+...
T Consensus 74 ------------~~~~~~~i~Yg~g-s~~G~~~~D~v~ig----~~~v-~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~ 135 (341)
T 3k1w_A 74 ------------HNGTELTLRYSTG-TVSGFLSQDIITVG----GITV-TQMFGEVTEMPALPFMLAEFDGVVGMGFIEQ 135 (341)
T ss_dssp ------------EEEEEEEEEETTE-EEEEEEEEEEEEET----TEEE-EEEEEEEEECCHHHHTTCSSSEEEECSCGGG
T ss_pred ------------ECCCEEEEEECCc-EEEEEEEEEEEEEC----Ccee-eEEEEEEEEccccccccCCcceEEECCchhh
Confidence 1367999999999 59999999999995 4567 9999999887432 34556899999999865
Q ss_pred c------hhhhccccccc-cceeeeeecCCC------ceeEEECCCCC--CCCCcEEeecccCCCCCeeEEeeEEEECCE
Q 016916 189 S------IVSQLHSQKLI-RNVVGHCLSGGG------GGFLFFGDDLY--DSSRVVWTSMSSDYTKYYSPGVAELFFGGE 253 (380)
Q Consensus 189 s------~~~~l~~~g~i-~~~Fs~~l~~~~------~G~l~~G~~~~--~~g~l~~~pl~~~~~~~w~v~l~~i~vg~~ 253 (380)
+ ++.+|++||+| +++||+||.+.. .|.|+||+++. +.|++.|+|+... .+|.|.+++|+++++
T Consensus 136 s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~w~v~l~~i~v~~~ 213 (341)
T 3k1w_A 136 AIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKT--GVWQIQMKGVSVGSS 213 (341)
T ss_dssp CGGGCCCHHHHHHHHTCBSSSEEEEEECCCC-----CCEEEEESSCCGGGEEEEEEEEECSST--TSCEEEECCEEETTE
T ss_pred cccCCCCHHHHHHHCCCCCCCEEEEEEeCCCCcCCCCCCEEEECccChHHccCceEEEecCCC--CEEEEEEeEEEECCE
Confidence 4 78899999999 899999998643 89999999874 5699999999876 799999999999999
Q ss_pred Eeee-CCCCEEEcccccceeeCHHHHHHHHHHHHHHhccCCCccCCCCCCcCcccccccCCccccccccccceEEEEEec
Q 016916 254 TTGL-KNLPVVFDSGSSYTYLNRVTYQTLTSIMKKELSAKSLKEAPEDETLPLCWKGRRPFKNVHDVKKCFRTLALSFTD 332 (380)
Q Consensus 254 ~~~~-~~~~aiiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~l~f~f~g 332 (380)
.+.. ....+||||||++++||++++++|.+++.+... . .....+|... ..+|+|+|+|+|
T Consensus 214 ~~~~~~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~~-----~---~g~~~~C~~~-----------~~~p~i~f~f~g 274 (341)
T 3k1w_A 214 TLLCEDGCLALVDTGASYISGSTSSIEKLMEALGAKKR-----L---FDYVVKCNEG-----------PTLPDISFHLGG 274 (341)
T ss_dssp EEECTTCEEEEECTTCSSEEECHHHHHHHHHHHTCEEC-----S---SCEEEEGGGG-----------GGCCCEEEEETT
T ss_pred EeecCCCCEEEEECCCChhcCCHHHHHHHHHHcCCeec-----C---CCeEEeCCCC-----------CcCCcEEEEECC
Confidence 7544 346899999999999999999999998854321 1 1134568754 358999999996
Q ss_pred CCCCeEEEEcCCeEEEEeCC--CeEEE-EEEeCCcC-CCCCeeEEcccc
Q 016916 333 GKTRTLFELTPEAYLIISNK--GNVCL-GILNGAEV-GLQDLNVIGGIG 377 (380)
Q Consensus 333 ~~~~~~~~l~~~~y~~~~~~--~~~C~-~~~~~~~~-~~~~~~IlG~~~ 377 (380)
++++|++++|+++... +..|+ ++...... .....||||+.+
T Consensus 275 ----~~~~l~~~~~~~~~~~~~~~~C~~~i~~~~~~~~~~~~~iLG~~f 319 (341)
T 3k1w_A 275 ----KEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATF 319 (341)
T ss_dssp ----EEEEECHHHHBCCSCCCTTSEEEBSEEECCCCTTTCSCEEECHHH
T ss_pred ----EEEEECHHHheeEccCCCCCeEEeEEEecccCCCCCCeEEEChHH
Confidence 9999999999987542 56899 46553211 124589999865
No 22
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=2.1e-46 Score=360.31 Aligned_cols=280 Identities=20% Similarity=0.282 Sum_probs=227.9
Q ss_pred eEEEEEecCCCCCeeEEEEEEecCCCcEEEEEEEcCCCceEEe-----CCCCCCCCCCCCCCCCCCCCCCCCCCCccccC
Q 016916 36 SLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQ-----CDAPCVRCVEAPHPLYRPSNDLVPCEDPICAS 110 (380)
Q Consensus 36 ~~~lpl~~~~~~~~~y~~~i~vGtP~Q~~~v~~DTGSs~~wv~-----~~~~c~~C~~~~~~~f~p~~S~~~c~~~~c~~ 110 (380)
.+.+||... +..|+++|.||||||++.|+|||||+++||+ |. +|..|. .++.|+|++|+. ++.
T Consensus 2 ~i~~~l~~~---~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~-~~~~C~--~~~~y~~~~SsT------~~~ 69 (339)
T 3fv3_A 2 SISLSLINE---GPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCG-KGVDCK--SSGTFTPSSSSS------YKN 69 (339)
T ss_dssp CEEEEEEEC---SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEEC-TTCCTT--TTCCBCGGGCTT------CEE
T ss_pred ceeeEEEcC---CCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCC-CCCCCC--CCCcCCCccCcc------eee
Confidence 478899854 4589999999999999999999999999998 65 566776 478999998841 111
Q ss_pred cCCCCCCCCCCCCCCceeEEeCCCCeEEEEEEEEEEEEeecCCCcCCCceEEeeeEecCCCCCCCCcceEEeeCCCCCc-
Q 016916 111 LHAPGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPGASYHPLDGILGLGKGKSS- 189 (380)
Q Consensus 111 ~~~~~~~~c~~~~~~~~~i~Y~~Gs~~~G~l~~D~v~l~~~~g~~~~~~~~FG~~~~~~~~~~~~~~~GIlGLg~~~~s- 189 (380)
..|.|.+.|++|+.+.|.+++|+|+|+ +..++++.|||++.... .+||||||+...+
T Consensus 70 ------------~~~~~~i~Yg~gs~~~G~~~~D~v~~g----~~~v~~~~fg~~~~~~~------~~GilGLg~~~~~~ 127 (339)
T 3fv3_A 70 ------------LGAAFTIRYGDGSTSQGTWGKDTVTIN----GVSITGQQIADVTQTSV------DQGILGIGYTSNEA 127 (339)
T ss_dssp ------------EEEEEEEECTTSCEEEEEEEEEEEEET----TEEEEEEEEEEEEEESS------SSCEEECSCGGGCC
T ss_pred ------------CCceEEEEECCCceEEEEEEEEEEEEC----CEEECceEEEEEEecCC------CceeEEecCccccc
Confidence 357999999999999999999999995 56788999999988732 5999999997543
Q ss_pred ---------------hhhhccccccc-cceeeeeecCC--CceeEEECCCCC--CCCCcEEeecccCCCCCeeEEeeEEE
Q 016916 190 ---------------IVSQLHSQKLI-RNVVGHCLSGG--GGGFLFFGDDLY--DSSRVVWTSMSSDYTKYYSPGVAELF 249 (380)
Q Consensus 190 ---------------~~~~l~~~g~i-~~~Fs~~l~~~--~~G~l~~G~~~~--~~g~l~~~pl~~~~~~~w~v~l~~i~ 249 (380)
++.+|+++|+| +++||+||.+. ..|.|+|||++. +.|++.|+|+... .+|.|.+++|+
T Consensus 128 ~~~~~~~~~~~~~~~~~~~L~~~g~i~~~~fsl~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~~v~l~~i~ 205 (339)
T 3fv3_A 128 VYDTSGRQTTPNYDNVPVTLKKQGKIRTNAYSLYLNSPSAETGTIIFGGVDNAKYSGKLVAEQVTSS--QALTISLASVN 205 (339)
T ss_dssp CBCTTSCBCSCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEEBCCS--SSCEEEEEEEE
T ss_pred cccccccccCccCCcHHHHHHHCCCCCCceEEEEECCCCCCCeEEEEeeechHHeecceEEEecccC--ccEEEEEEEEE
Confidence 78899999999 89999999753 589999998864 5799999999987 59999999999
Q ss_pred ECCEEeeeCCCCEEEcccccceeeCHHHHHHHHHHHHHHhccCCCccCCCCCCcCcccccccCCccccccccccceEEEE
Q 016916 250 FGGETTGLKNLPVVFDSGSSYTYLNRVTYQTLTSIMKKELSAKSLKEAPEDETLPLCWKGRRPFKNVHDVKKCFRTLALS 329 (380)
Q Consensus 250 vg~~~~~~~~~~aiiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~l~f~ 329 (380)
++++.+.. ...+||||||++++||+++|++|.+++.+..... ... ......+|+. ..+|+|+|+
T Consensus 206 v~g~~~~~-~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~--~~~-~~~~~~~C~~------------~~~p~i~f~ 269 (339)
T 3fv3_A 206 LKGSSFSF-GDGALLDSGTTLTYFPSDFAAQLADKAGARLVQV--ARD-QYLYFIDCNT------------DTSGTTVFN 269 (339)
T ss_dssp ESSCEEEE-EEEEEECTTBSSEEECHHHHHHHHHHHTCEEEEE--ETT-EEEEEECTTC------------CCCSEEEEE
T ss_pred ECCEeecC-CccEEEeCCCCCEecCHHHHHHHHHHcCCEEccc--ccc-CceEEEecCC------------CCCCcEEEE
Confidence 99998875 3679999999999999999999999997543210 001 1223357875 147999999
Q ss_pred EecCCCCeEEEEcCCeEEEEeCCCeEEE-EEEeCCcCCCCCeeEEcccc
Q 016916 330 FTDGKTRTLFELTPEAYLIISNKGNVCL-GILNGAEVGLQDLNVIGGIG 377 (380)
Q Consensus 330 f~g~~~~~~~~l~~~~y~~~~~~~~~C~-~~~~~~~~~~~~~~IlG~~~ 377 (380)
|++ +++++|++++|+++..+ ..|+ ++.. . +.||||+.+
T Consensus 270 f~~---g~~~~v~~~~~~~~~~~-~~C~~~i~~-~-----~~~ilG~~f 308 (339)
T 3fv3_A 270 FGN---GAKITVPNTEYVYQNGD-GTCLWGIQP-S-----DDTILGDNF 308 (339)
T ss_dssp ETT---SCEEEEEGGGGEEECSS-SCEEESEEE-C-----SSCEECHHH
T ss_pred ECC---CCEEEECHHHheeeCCC-CeEEEEEEe-C-----CcEEeChHH
Confidence 975 59999999999998654 4574 6665 2 369999865
No 23
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=1e-46 Score=362.94 Aligned_cols=281 Identities=21% Similarity=0.316 Sum_probs=225.0
Q ss_pred eEEEEEecCCCCCeeEEEEEEecCCCcEEEEEEEcCCCceEEeCCCC--CC---------CCCCCCCCCCCCCCCCCCCC
Q 016916 36 SLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAP--CV---------RCVEAPHPLYRPSNDLVPCE 104 (380)
Q Consensus 36 ~~~lpl~~~~~~~~~y~~~i~vGtP~Q~~~v~~DTGSs~~wv~~~~~--c~---------~C~~~~~~~f~p~~S~~~c~ 104 (380)
.+.+|+... +++|+++|.||||||++.|+|||||+++||+|. . |. .|. .++.|+|++|+.
T Consensus 2 ~v~~~l~~~---~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~-~~~C~~~~~~~~~~~C~--~~~~y~~~~SsT--- 72 (342)
T 3pvk_A 2 AVPVTLHNE---QVTYAADITVGSNNQKLNVIVDTGSSDLWVPDV-NVDCQVTYSDQTADFCK--QKGTYDPSGSSA--- 72 (342)
T ss_dssp CEEEEEEEC---SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEE-EEEECCCSTTCCTTGGG--TTCCBCGGGCTT---
T ss_pred CcceEEecC---CcEEEEEEEEcCCCcEEEEEEECCCcceEEEcC-CCCCcccccccccCCCC--CCCcCCCccCcc---
Confidence 367788754 458999999999999999999999999999865 3 53 454 478899988841
Q ss_pred CccccCcCCCCCCCCCCCCCCceeEEeCCCCeEEEEEEEEEEEEeecCCCcCCCceEEeeeEecCCCCCCCCcceEEeeC
Q 016916 105 DPICASLHAPGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPGASYHPLDGILGLG 184 (380)
Q Consensus 105 ~~~c~~~~~~~~~~c~~~~~~~~~i~Y~~Gs~~~G~l~~D~v~l~~~~g~~~~~~~~FG~~~~~~~~~~~~~~~GIlGLg 184 (380)
++. ..|.|++.|++|+.+.|.+++|+|+|+ +..++++.|||++... ..+||||||
T Consensus 73 ---~~~------------~~~~~~i~Yg~gs~~~G~~~~D~v~ig----~~~v~~~~fg~~~~~~------~~~GilGLg 127 (342)
T 3pvk_A 73 ---SQD------------LNTPFKIGYGDGSSSQGTLYKDTVGFG----GVSIKNQVLADVDSTS------IDQGILGVG 127 (342)
T ss_dssp ---CEE------------EEEEEEEECSSSCEEEEEEEEEEEEET----TEEEEEEEEEEEEEES------SSSCEEECS
T ss_pred ---eee------------cCCeEEEEecCCCeEEEEEEEEEEEEC----CEEecceEEEEEEccC------CCccEEEec
Confidence 111 357999999999889999999999995 5678899999998863 479999999
Q ss_pred CCC-------Cchhhhccccccc-cceeeeeecC--CCceeEEECCCCC--CCCCcEEeecccCCCCCeeEEeeEEEECC
Q 016916 185 KGK-------SSIVSQLHSQKLI-RNVVGHCLSG--GGGGFLFFGDDLY--DSSRVVWTSMSSDYTKYYSPGVAELFFGG 252 (380)
Q Consensus 185 ~~~-------~s~~~~l~~~g~i-~~~Fs~~l~~--~~~G~l~~G~~~~--~~g~l~~~pl~~~~~~~w~v~l~~i~vg~ 252 (380)
+.. .+++.+|+++|+| +++||+||.+ ...|.|+|||++. +.|++.|+|+... .+|.|.|++|++++
T Consensus 128 ~~~~~~~~~~~~~~~~L~~qg~i~~~~fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~~v~l~~i~v~g 205 (342)
T 3pvk_A 128 YKTNEAGGSYDNVPVTLKKQGVIAKNAYSLYLNSPDAATGQIIFGGVDNAKYSGSLIALPVTSD--RELRISLGSVEVSG 205 (342)
T ss_dssp CGGGCSSCSSCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCCS--SSCEEEEEEEEETT
T ss_pred CccccccccCCcHHHHHHhcCCCCCceEEEEeCCCCCCCcEEEECccCccceeeeeEEeecCcc--ceEEEEEeEEEECC
Confidence 986 4689999999999 8999999975 3579999999864 5799999999987 59999999999999
Q ss_pred EEeeeCCCCEEEcccccceeeCHHHHHHHHHHHHHHhccCCCccCCCCCCcCcccccccCCccccccccccceEEEEEec
Q 016916 253 ETTGLKNLPVVFDSGSSYTYLNRVTYQTLTSIMKKELSAKSLKEAPEDETLPLCWKGRRPFKNVHDVKKCFRTLALSFTD 332 (380)
Q Consensus 253 ~~~~~~~~~aiiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~l~f~f~g 332 (380)
+.+...+..+||||||++++||+++|++|.+++.++.... .........+|+. .|+|+|+|++
T Consensus 206 ~~~~~~~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~---~~~~~~~~~~C~~--------------~p~i~f~f~~ 268 (342)
T 3pvk_A 206 KTINTDNVDVLLDSGTTITYLQQDLADQIIKAFNGKLTQD---SNGNSFYEVDCNL--------------SGDVVFNFSK 268 (342)
T ss_dssp EEEEEEEEEEEECTTCSSEEECHHHHHHHHHHTTCEEEEC---TTSCEEEEECSCC--------------CSEEEEEEST
T ss_pred EEecCCCceEEEeCCCCCeecCHHHHHHHHHHcCCeeccc---CCCceEEEEecCC--------------CCceEEEECC
Confidence 9988766789999999999999999999999997654311 1001113356763 5899999996
Q ss_pred CCCCeEEEEcCCeEEEEeC--CC---eEEEEEEeCCcCCCCCeeEEcccc
Q 016916 333 GKTRTLFELTPEAYLIISN--KG---NVCLGILNGAEVGLQDLNVIGGIG 377 (380)
Q Consensus 333 ~~~~~~~~l~~~~y~~~~~--~~---~~C~~~~~~~~~~~~~~~IlG~~~ 377 (380)
+.+++||+++|+++.. ++ ..|+..+... +.||||+.+
T Consensus 269 ---g~~~~vp~~~~~~~~~~~~g~~~~~C~~~i~~~-----~~~ilG~~f 310 (342)
T 3pvk_A 269 ---NAKISVPASEFAASLQGDDGQPYDKCQLLFDVN-----DANILGDNF 310 (342)
T ss_dssp ---TCEEEEEGGGGEEC----------CEEESEEEC-----TTCEECHHH
T ss_pred ---CCEEEEcHHHheeeccccCCCcCCeeEEEEeeC-----CCeEeCHHH
Confidence 5899999999998732 23 5798544432 368999875
No 24
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=5.6e-47 Score=361.95 Aligned_cols=284 Identities=17% Similarity=0.218 Sum_probs=224.0
Q ss_pred CCeEEEEEecCCCCCeeEEEEEEecCCCcEEEEEEEcCCCceEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCcCC
Q 016916 34 GSSLLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHA 113 (380)
Q Consensus 34 ~~~~~lpl~~~~~~~~~y~~~i~vGtP~Q~~~v~~DTGSs~~wv~~~~~c~~C~~~~~~~f~p~~S~~~c~~~~c~~~~~ 113 (380)
++....|+.. +.+|+++|+|| ||++.|+|||||+++||+|. +|..|..+.++.|+|++|+ + +
T Consensus 4 g~v~~~~~~~----~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~-~C~~~~c~~~~~y~~~~Ss--~-----~---- 65 (323)
T 1bxo_A 4 GVATNTPTAN----DEEYITPVTIG--GTTLNLNFDTGSADLWVFST-ELPASQQSGHSVYNPSATG--K-----E---- 65 (323)
T ss_dssp EEEEEEECGG----GSCEEEEEEET--TEEEEEEEETTCCCEEECBT-TSCHHHHTTSCCBCHHHHC--E-----E----
T ss_pred CceeeeecCC----CCEEEEEEEEC--CEEEEEEEeCCCcceEEecC-CCCchhccCCCCCCcccCC--c-----c----
Confidence 3444555553 45899999999 89999999999999999999 8998776678999998774 1 1
Q ss_pred CCCCCCCCCCCCceeEEeCCCCeEEEEEEEEEEEEeecCCCcCCCceEEeeeEecCCC-CCCCCcceEEeeCCCCCc---
Q 016916 114 PGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPG-ASYHPLDGILGLGKGKSS--- 189 (380)
Q Consensus 114 ~~~~~c~~~~~~~~~i~Y~~Gs~~~G~l~~D~v~l~~~~g~~~~~~~~FG~~~~~~~~-~~~~~~~GIlGLg~~~~s--- 189 (380)
.+.|.|++.|++|+.+.|.+++|+|+|+ +..++++.|||++..... +.....+||||||+...+
T Consensus 66 --------~~~~~~~i~Yg~Gs~~~G~~~~D~v~ig----~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~ 133 (323)
T 1bxo_A 66 --------LSGYTWSISYGDGSSASGNVFTDSVTVG----GVTAHGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTVQ 133 (323)
T ss_dssp --------EEEEEEEEECTTSCEEEEEEEEEEEEET----TEEEEEEEEEEEEEECHHHHTCTTCSEEEECSCGGGCCCB
T ss_pred --------cCCCeEEEEeCCCCeEEEEEEEEEEEEC----CEEECcEEEEEEEecCcccccCCCCceEEEeCcccccccc
Confidence 1367999999999779999999999995 567889999999986432 222567999999997543
Q ss_pred ------hhhhccccccc-cceeeeeecCCCceeEEECCCCC--CCCCcEEeecccCCCCCeeEEeeEEEECCEEeeeCCC
Q 016916 190 ------IVSQLHSQKLI-RNVVGHCLSGGGGGFLFFGDDLY--DSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGLKNL 260 (380)
Q Consensus 190 ------~~~~l~~~g~i-~~~Fs~~l~~~~~G~l~~G~~~~--~~g~l~~~pl~~~~~~~w~v~l~~i~vg~~~~~~~~~ 260 (380)
++++|+++ + +++||+||.++..|.|+||+++. +.|++.|+|+.... .+|.|.|++|++++ +.....
T Consensus 134 ~~~~~~~~~~l~~~--i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~-~~w~v~l~~i~v~~--~~~~~~ 208 (323)
T 1bxo_A 134 PQSQTTFFDTVKSS--LAQPLFAVALKHQQPGVYDFGFIDSSKYTGSLTYTGVDNSQ-GFWSFNVDSYTAGS--QSGDGF 208 (323)
T ss_dssp SSCCCCHHHHHGGG--BSSSEEEEECCSSSCEEEEESSCCGGGBSSCCEEEECBCTT-SSCEEEEEEEEETT--EEEEEE
T ss_pred cCCCCCHHHHHHHh--cCCcEEEEEEeCCCCceEEEeCcChhhccCceEEEECCCCC-CeEEEEEeeEEECC--ccCCCc
Confidence 56778776 6 89999999877799999999874 57999999998544 79999999999999 333457
Q ss_pred CEEEcccccceeeCHHHHHHHHHHHHHHhccCCCccCCCCCCcCcccccccCCccccccccccceEEEEEecCCCCeEEE
Q 016916 261 PVVFDSGSSYTYLNRVTYQTLTSIMKKELSAKSLKEAPEDETLPLCWKGRRPFKNVHDVKKCFRTLALSFTDGKTRTLFE 340 (380)
Q Consensus 261 ~aiiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~l~f~f~g~~~~~~~~ 340 (380)
.+||||||++++||++++++|.+++.++... .. ......+|+. .+|+|+|+|+| ++++
T Consensus 209 ~aiiDSGTs~~~lP~~~~~~l~~~i~~a~~~----~~-~g~~~~~C~~-------------~~P~i~f~fgg----~~~~ 266 (323)
T 1bxo_A 209 SGIADTGTTLLLLDDSVVSQYYSQVSGAQQD----SN-AGGYVFDCST-------------NLPDFSVSISG----YTAT 266 (323)
T ss_dssp EEEECTTCSSEEECHHHHHHHHTTSTTCEEE----TT-TTEEEECTTC-------------CCCCEEEEETT----EEEE
T ss_pred eEEEeCCCCceeCCHHHHHHHHHhCCCceEc----Cc-CCEEEEECCC-------------CCceEEEEECC----EEEE
Confidence 8999999999999999999998887543221 11 1112346873 37999999975 9999
Q ss_pred EcCCeEEEEeCC-CeEEEE-EEeCCcCCCCCeeEEcccc
Q 016916 341 LTPEAYLIISNK-GNVCLG-ILNGAEVGLQDLNVIGGIG 377 (380)
Q Consensus 341 l~~~~y~~~~~~-~~~C~~-~~~~~~~~~~~~~IlG~~~ 377 (380)
||+++|++...+ ...|++ +.... ..+.||||+++
T Consensus 267 l~~~~~~~~~~~~~~~C~~~i~~~~---~~~~~ILG~~f 302 (323)
T 1bxo_A 267 VPGSLINYGPSGDGSTCLGGIQSNS---GIGFSIFGDIF 302 (323)
T ss_dssp ECHHHHEEEECSSSSCEEESEEECT---TCSSEEECHHH
T ss_pred ECHHHeEEeccCCCCeEEEEEECCC---CCCcEEEChHH
Confidence 999999987643 368996 55433 13579999975
No 25
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=1.1e-46 Score=373.30 Aligned_cols=283 Identities=19% Similarity=0.265 Sum_probs=226.4
Q ss_pred EEEEEecCCCCCeeEEEEEEecCCCcEEEEEEEcCCCceEEeCCCCCC--CCCCCCCCCCCCCCCCCCCCCccccCcCCC
Q 016916 37 LLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCV--RCVEAPHPLYRPSNDLVPCEDPICASLHAP 114 (380)
Q Consensus 37 ~~lpl~~~~~~~~~y~~~i~vGtP~Q~~~v~~DTGSs~~wv~~~~~c~--~C~~~~~~~f~p~~S~~~c~~~~c~~~~~~ 114 (380)
..+||.. +.+.+|+++|+||||||++.|+|||||+++||+|. +|. .|. .++.|+|++|+ +++.
T Consensus 128 ~~~~L~n--~~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~-~C~~~~C~--~~~~ydps~Ss------T~~~---- 192 (453)
T 2bju_A 128 DNIELVD--FQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSV-KCTTAGCL--TKHLYDSSKSR------TYEK---- 192 (453)
T ss_dssp EEEEEEE--ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSTTGG--GSCCBCGGGCT------TCEE----
T ss_pred CceeeEe--cCCCEEEEEEEECCCCeEEEEEEECCCcceEEecc-CCCccccC--CCCcCCCccCC------ceeE----
Confidence 4577773 24679999999999999999999999999999999 897 565 57899998884 1121
Q ss_pred CCCCCCCCCCCceeEEeCCCCeEEEEEEEEEEEEeecCCCcCCCceEEeeeEecC--CC-CCCCCcceEEeeCCCCC---
Q 016916 115 GHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQV--PG-ASYHPLDGILGLGKGKS--- 188 (380)
Q Consensus 115 ~~~~c~~~~~~~~~i~Y~~Gs~~~G~l~~D~v~l~~~~g~~~~~~~~FG~~~~~~--~~-~~~~~~~GIlGLg~~~~--- 188 (380)
.+|.|++.|++|+ +.|.+++|+|+|+ +..++ +.|||++... +. +.....+||||||++..
T Consensus 193 --------~~~~~~i~YgdGs-~~G~~~~Dtv~ig----~~~v~-~~Fg~a~~~~~~g~~f~~~~~dGIlGLg~~~~s~~ 258 (453)
T 2bju_A 193 --------DGTKVEMNYVSGT-VSGFFSKDLVTVG----NLSLP-YKFIEVIDTNGFEPTYTASTFDGILGLGWKDLSIG 258 (453)
T ss_dssp --------EEEEEEEECSSSE-EEEEEEEEEEEET----TEEEE-EEEEEEEECGGGTTHHHHSSCCEEEECSCGGGSTT
T ss_pred --------CCcEEEEEcCCCC-eEEEEEEEEEEEe----CcEEE-EEEEEEEEecccCccccccCCceeEeccCCccccc
Confidence 3679999999994 8999999999995 46677 9999999874 22 22346899999999754
Q ss_pred ---chhhhccccccc-cceeeeeecCC--CceeEEECCCCC--CCCCcEEeecccCCCCCeeEEeeEEEECCEEeeeCCC
Q 016916 189 ---SIVSQLHSQKLI-RNVVGHCLSGG--GGGFLFFGDDLY--DSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGLKNL 260 (380)
Q Consensus 189 ---s~~~~l~~~g~i-~~~Fs~~l~~~--~~G~l~~G~~~~--~~g~l~~~pl~~~~~~~w~v~l~~i~vg~~~~~~~~~ 260 (380)
+++.+|++||+| +++||+||.+. ..|.|+|||++. +.|++.|+|+... .+|.|.++ |+++++.+ ...
T Consensus 259 ~~~~~~~~L~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~G~l~~~pv~~~--~~w~V~l~-I~Vgg~~~--~~~ 333 (453)
T 2bju_A 259 SVDPIVVELKNQNKIENALFTFYLPVHDKHTGFLTIGGIEERFYEGPLTYEKLNHD--LYWQITLD-AHVGNIML--EKA 333 (453)
T ss_dssp CCCCHHHHHHHTTSSSSCEEEEECCBTTTBCEEEEESSCCGGGEEEEEEEEEEEEE--TTEEEEEE-EEETTEEE--EEE
T ss_pred CCCcHHHHHHHCCCCCCCEEEEEeCCCCCCCeEEEECCCCHHHcCCceEEEecCCC--ceEEEEEE-EEECcEEe--ccc
Confidence 467889999999 89999999864 689999999875 4699999999876 69999999 99999442 567
Q ss_pred CEEEcccccceeeCHHHHHHHHHHHHHHhccCCCccCCCCCCcCcccccccCCccccccccccceEEEEEecCCCCeEEE
Q 016916 261 PVVFDSGSSYTYLNRVTYQTLTSIMKKELSAKSLKEAPEDETLPLCWKGRRPFKNVHDVKKCFRTLALSFTDGKTRTLFE 340 (380)
Q Consensus 261 ~aiiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~l~f~f~g~~~~~~~~ 340 (380)
.+||||||++++||+++|++|.+++.+. . ...+.....+|+. . .+|+|+|+|+| ++++
T Consensus 334 ~aIiDSGTsl~~lP~~~~~~l~~~i~~~-~-----~~~g~~~~v~C~~-~-----------~~P~itf~fgg----~~~~ 391 (453)
T 2bju_A 334 NCIVDSGTSAITVPTDFLNKMLQNLDVI-K-----VPFLPFYVTLCNN-S-----------KLPTFEFTSEN----GKYT 391 (453)
T ss_dssp EEEECTTCCSEEECHHHHHHHTTTSSCE-E-----CTTSSCEEEETTC-T-----------TCCCEEEECSS----CEEE
T ss_pred cEEEcCCCCeEecCHHHHHHHHHHhCCc-c-----cCCCceEEEecCC-C-----------CCCcEEEEECC----EEEE
Confidence 8999999999999999999998877542 1 1111023457875 2 48999999986 9999
Q ss_pred EcCCeEEEEeCC--CeEEE-EEEeCCcCCCCCeeEEcccc
Q 016916 341 LTPEAYLIISNK--GNVCL-GILNGAEVGLQDLNVIGGIG 377 (380)
Q Consensus 341 l~~~~y~~~~~~--~~~C~-~~~~~~~~~~~~~~IlG~~~ 377 (380)
|++++|+++... +..|+ ++..... ..+.||||+++
T Consensus 392 l~~~~yi~~~~~~g~~~C~~~~~~~~~--~~~~~ILGd~F 429 (453)
T 2bju_A 392 LEPEYYLQHIEDVGPGLCMLNIIGLDF--PVPTFILGDPF 429 (453)
T ss_dssp ECHHHHEEECTTTSTTEEEECEEECCC--SSCEEEECHHH
T ss_pred ECHHHhEeecccCCCceEEEEEEeCCC--CCCCEEECHHH
Confidence 999999998753 45898 5665442 13489999975
No 26
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=1.1e-46 Score=360.81 Aligned_cols=284 Identities=15% Similarity=0.204 Sum_probs=226.1
Q ss_pred EEEEEecCCCCCeeEEEEEEecCCCcEEEEEEEcCCCceEEeCCCCCC--CCCCCCCCCCCCCCCCCCCCCccccCcCCC
Q 016916 37 LLFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCV--RCVEAPHPLYRPSNDLVPCEDPICASLHAP 114 (380)
Q Consensus 37 ~~lpl~~~~~~~~~y~~~i~vGtP~Q~~~v~~DTGSs~~wv~~~~~c~--~C~~~~~~~f~p~~S~~~c~~~~c~~~~~~ 114 (380)
+..||.. +.+.+|+++|.|| ||++.|+|||||+++||+|. .|. .|....++.|+|++|+ ++.
T Consensus 7 ~~~~l~n--~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~-~C~~~~C~~~~~~~y~~~~ST-------~~~---- 70 (330)
T 1yg9_A 7 LYKLVHV--FINTQYAGITKIG--NQNFLTVFDSTSCNVVVASQ-ECVGGACVCPNLQKYEKLKPK-------YIS---- 70 (330)
T ss_dssp SCSCEEE--EECTTSEEEEEET--TEEEEEEEETTCCCEEEECT-TCCSGGGGSTTCCCCCCSSCE-------EEE----
T ss_pred eEeeeec--CCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecC-CCCCccCcccccCccCCCCCc-------eEE----
Confidence 3445553 2355899999999 89999999999999999999 897 7843457899998872 111
Q ss_pred CCCCCCCCCCCceeEEeCCCCeEEEEEEEEEEEEeecCCCcCCCceEEeeeEecCCCCCCCCcceEEeeCCCCCc-----
Q 016916 115 GHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPGASYHPLDGILGLGKGKSS----- 189 (380)
Q Consensus 115 ~~~~c~~~~~~~~~i~Y~~Gs~~~G~l~~D~v~l~~~~g~~~~~~~~FG~~~~~~~~~~~~~~~GIlGLg~~~~s----- 189 (380)
.++.|++.|++| ++.|.+++|+|+|+ +..++++.|||++.....+.....+||||||+...+
T Consensus 71 --------~~~~~~i~Yg~G-s~~G~~~~Dtv~ig----~~~~~~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~ 137 (330)
T 1yg9_A 71 --------DGNVQVKFFDTG-SAVGRGIEDSLTIS----QLTTSQQDIVLADELSQEVCILSADVVVGIAAPGCPNALKG 137 (330)
T ss_dssp --------EEEEEEEETTTE-EEEEEEEEEEEEET----TEEEEEEEEEEEEEECTHHHHTTCSEEEECSCTTSCCTTSC
T ss_pred --------CCCEEEEEECCc-eEEEEEEEEEEEEC----CEEEcCeEEEEEEEcccccccccCceEEEcCcchhccccCC
Confidence 256899999999 56999999999995 567889999999987222333468999999998765
Q ss_pred --hhhhccccccccceeeeeecCC--C--ceeEEECCCCC--CCCCcEEeecccCCCCCeeEEeeEEEECCEEeeeCCCC
Q 016916 190 --IVSQLHSQKLIRNVVGHCLSGG--G--GGFLFFGDDLY--DSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGLKNLP 261 (380)
Q Consensus 190 --~~~~l~~~g~i~~~Fs~~l~~~--~--~G~l~~G~~~~--~~g~l~~~pl~~~~~~~w~v~l~~i~vg~~~~~~~~~~ 261 (380)
++.+|+++|+|+++||+||.+. . .|.|+||+++. +.|++.|+|+... .+|+|.|++|+++++.+......
T Consensus 138 ~~~~~~l~~qg~i~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~w~v~l~~i~v~~~~~~~~~~~ 215 (330)
T 1yg9_A 138 KTVLENFVEENLIAPVFSIHHARFQDGEHFGEIIFGGSDWKYVDGEFTYVPLVGD--DSWKFRLDGVKIGDTTVAPAGTQ 215 (330)
T ss_dssp CCHHHHHHHTTSSCSEEEEEEEECTTSCEEEEEEETSCCGGGEEEEEEEEEBSCT--TSCCEECSEEEETTEEEECTTCE
T ss_pred CCHHHHHHhcCCCCceEEEEEcCCCCCCCCCEEEECCcCHHHccCceEEEECCCC--CEEEEEeCeEEECCEEEcCCCcE
Confidence 7788999998899999999753 2 89999999874 4699999999865 79999999999999987655678
Q ss_pred EEEcccccceeeCHHHHHHHHHHHHHHhccCCCccCCCC-CC-cCcccccccCCccccccccccceEEEEEecCCCCeEE
Q 016916 262 VVFDSGSSYTYLNRVTYQTLTSIMKKELSAKSLKEAPED-ET-LPLCWKGRRPFKNVHDVKKCFRTLALSFTDGKTRTLF 339 (380)
Q Consensus 262 aiiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~-~~-~~~C~~~~~~~~~~~~~~~~~P~l~f~f~g~~~~~~~ 339 (380)
+||||||++++||+++|++|.+++.+... .. .. .. ..+|+.. ..+|+|+|+|+| +++
T Consensus 216 aiiDSGTs~~~lP~~~~~~l~~~~~~~~~-----~~-g~~~~~~~~C~~~-----------~~~p~i~f~fgg----~~~ 274 (330)
T 1yg9_A 216 AIIDTSKAIIVGPKAYVNPINEAIGCVVE-----KT-TTRRICKLDCSKI-----------PSLPDVTFVING----RNF 274 (330)
T ss_dssp EEECTTCSSEEEEHHHHHHHHHHHTCEEE-----EC-SSCEEEEECGGGG-----------GGSCCEEEEETT----EEE
T ss_pred EEEecCCccccCCHHHHHHHHHHhCCccc-----CC-CceEEEEEECCCc-----------cccCcEEEEECC----EEE
Confidence 99999999999999999999999854321 11 10 12 3468753 358999999975 999
Q ss_pred EEcCCeEEEEeCCCeEEE-EEEeCCcCCCCCeeEEcccc
Q 016916 340 ELTPEAYLIISNKGNVCL-GILNGAEVGLQDLNVIGGIG 377 (380)
Q Consensus 340 ~l~~~~y~~~~~~~~~C~-~~~~~~~~~~~~~~IlG~~~ 377 (380)
+|++++|+++. +..|+ ++.... ..+.||||+++
T Consensus 275 ~l~~~~y~~~~--~~~C~~~i~~~~---~~~~~ilG~~f 308 (330)
T 1yg9_A 275 NISSQYYIQQN--GNLCYSGFQPCG---HSDHFFIGDFF 308 (330)
T ss_dssp EECHHHHEEEE--TTEEEESEEEET---TCSSEEECHHH
T ss_pred EECHHHhcccC--CCcEEEEEEeCC---CCCeEEecHHH
Confidence 99999999986 56898 455432 23579999975
No 27
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=8.3e-46 Score=370.39 Aligned_cols=220 Identities=19% Similarity=0.306 Sum_probs=183.5
Q ss_pred EEEEecCCCCCeeEEEEEEecCCCcEEEEEEEcCCCceEEeCCCCCC---CCCCCCCCCCCCCCCCCCCCCccccCcCCC
Q 016916 38 LFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCV---RCVEAPHPLYRPSNDLVPCEDPICASLHAP 114 (380)
Q Consensus 38 ~lpl~~~~~~~~~y~~~i~vGtP~Q~~~v~~DTGSs~~wv~~~~~c~---~C~~~~~~~f~p~~S~~~c~~~~c~~~~~~ 114 (380)
.+||... .+.+|+++|+||||||++.|+|||||+++||+|. .|. .|.. ++.|+|++|+ +++
T Consensus 43 ~~~l~n~--~~~~Y~~~i~IGTP~Q~~~v~~DTGSs~lWV~~~-~C~~~~~C~~--~~~y~~~~Ss------T~~----- 106 (478)
T 1qdm_A 43 IVALKNY--MNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSA-KCYFSIACYL--HSRYKAGASS------TYK----- 106 (478)
T ss_dssp SGGGCCG--GGCCEEEEEEETTTTEEEEEEEETTCCCCEEEBT-TCCSCGGGGG--SCCBCGGGCT------TCB-----
T ss_pred eEEeEec--cCCEEEEEEEECCCCeEEEEEEcCCCcceEEecC-CCCCCccccC--CCCCCcccCC------Cee-----
Confidence 4566542 4678999999999999999999999999999999 895 6874 6899998884 111
Q ss_pred CCCCCCCCCCCceeEEeCCCCeEEEEEEEEEEEEeecCCCcCCCceEEeeeEecCCC-CCCCCcceEEeeCCCCCc----
Q 016916 115 GHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPG-ASYHPLDGILGLGKGKSS---- 189 (380)
Q Consensus 115 ~~~~c~~~~~~~~~i~Y~~Gs~~~G~l~~D~v~l~~~~g~~~~~~~~FG~~~~~~~~-~~~~~~~GIlGLg~~~~s---- 189 (380)
.++|.|++.|++| ++.|.+++|+|+|+ +..++++.|||++..... +.....+||||||+..++
T Consensus 107 -------~~~~~~~i~Yg~G-s~~G~~~~Dtv~ig----~~~v~~~~Fg~a~~~~~~~f~~~~~dGIlGLg~~~~s~~~~ 174 (478)
T 1qdm_A 107 -------KNGKPAAIQYGTG-SIAGYFSEDSVTVG----DLVVKDQEFIEATKEPGITFLVAKFDGILGLGFKEISVGKA 174 (478)
T ss_dssp -------CCCCEEEEEETTE-EEEEEEEEEEEEET----TEEEEEEEEEEEEECCBSHHHHCSSSEEEECSCGGGCGGGC
T ss_pred -------eCCcEEEEEcCCC-CeEEEEEEEEEEEC----CeEECCEEEEEEEecCCcccccccccceecccccccccCCC
Confidence 1467999999999 58999999999995 567889999999886432 233567999999998765
Q ss_pred --hhhhccccccc-cceeeeeecCC----CceeEEECCCCC--CCCCcEEeecccCCCCCeeEEeeEEEECCEEeee--C
Q 016916 190 --IVSQLHSQKLI-RNVVGHCLSGG----GGGFLFFGDDLY--DSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGL--K 258 (380)
Q Consensus 190 --~~~~l~~~g~i-~~~Fs~~l~~~----~~G~l~~G~~~~--~~g~l~~~pl~~~~~~~w~v~l~~i~vg~~~~~~--~ 258 (380)
++.+|.+||+| +++||+||.+. .+|.|+|||+++ +.|++.|+|+... ++|+|.|++|.++++.+.. .
T Consensus 175 ~p~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~l~~~pv~~~--~~w~v~l~~i~v~g~~~~~~~~ 252 (478)
T 1qdm_A 175 VPVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVTQK--GYWQFDMGDVLVGGKSTGFCAG 252 (478)
T ss_dssp CCHHHHHTTTTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEEEEE--TTEEEEECCEEETTEECSTTTT
T ss_pred CcHHHHHHHCCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCCceEEeccCC--CeEEEEEeEEEECCEEEeecCC
Confidence 45678999999 89999999753 489999999875 4689999999876 7999999999999998754 3
Q ss_pred CCCEEEcccccceeeCHHHHHHHHHHHHH
Q 016916 259 NLPVVFDSGSSYTYLNRVTYQTLTSIMKK 287 (380)
Q Consensus 259 ~~~aiiDSGTs~~~lp~~~~~~l~~~i~~ 287 (380)
...+|+||||+++++|+++|++|.++|.+
T Consensus 253 ~~~aiiDTGTs~~~lP~~~~~~i~~~i~a 281 (478)
T 1qdm_A 253 GCAAIADSGTSLLAGPTAIITEINEKIGA 281 (478)
T ss_dssp CEEEEECSSCCSEEECHHHHHHHHHHHTC
T ss_pred CceEEEcCCCCceeCCHHHHHHHHHHhCc
Confidence 46899999999999999999999988853
No 28
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=2.6e-45 Score=358.36 Aligned_cols=289 Identities=19% Similarity=0.270 Sum_probs=219.4
Q ss_pred CeeEEEEEEecCCCcEEEEEEEcCCCceEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCcCCCCCCCCCCCCCCce
Q 016916 48 TGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAPGHHNCEDPAQCDY 127 (380)
Q Consensus 48 ~~~y~~~i~vGtP~Q~~~v~~DTGSs~~wv~~~~~c~~C~~~~~~~f~p~~S~~~c~~~~c~~~~~~~~~~c~~~~~~~~ 127 (380)
+..|+++|+||||||++.|+|||||+++||+|. +|..| ++.|+|++|+. ++. ..|.|
T Consensus 12 ~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~-~c~~~----~~~f~~~~SsT------~~~------------~~~~~ 68 (383)
T 2ewy_A 12 GRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGT-PHSYI----DTYFDTERSST------YRS------------KGFDV 68 (383)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECS-CBTTB----SCCCCGGGCTT------CEE------------EEEEE
T ss_pred CCcEEEEEEecCCCceEEEEEecCCCceEEecC-CCCcc----ccCcccccCcc------cee------------CCceE
Confidence 458999999999999999999999999999998 88766 47899998841 111 35799
Q ss_pred eEEeCCCCeEEEEEEEEEEEEeecCCCcCCCceEEeeeEecCCCC-CCCCcceEEeeCCCCCc--------hhhhccccc
Q 016916 128 ELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPGA-SYHPLDGILGLGKGKSS--------IVSQLHSQK 198 (380)
Q Consensus 128 ~i~Y~~Gs~~~G~l~~D~v~l~~~~g~~~~~~~~FG~~~~~~~~~-~~~~~~GIlGLg~~~~s--------~~~~l~~~g 198 (380)
++.|++| ++.|.+++|+|+|++ +......+.|++.......+ .....+||||||+..++ ++.+|.+|+
T Consensus 69 ~i~Yg~G-s~~G~~~~Dtv~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~~dGilGLg~~~~s~~~~~~~~~~~~l~~q~ 145 (383)
T 2ewy_A 69 TVKYTQG-SWTGFVGEDLVTIPK--GFNTSFLVNIATIFESENFFLPGIKWNGILGLAYATLAKPSSSLETFFDSLVTQA 145 (383)
T ss_dssp EEECSSC-EEEEEEEEEEEEETT--TEEEEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHH
T ss_pred EEEECCc-EEEEEEEEEEEEECC--CccceeEEEEEEEEeecceeeccCcCceEEecCchhcccccccccCHHHHHHHcc
Confidence 9999999 579999999999963 11112246788876653332 23467999999997643 566888888
Q ss_pred cccceeeeeec---------CCCceeEEECCCCC--CCCCcEEeecccCCCCCeeEEeeEEEECCEEeeeC-----CCCE
Q 016916 199 LIRNVVGHCLS---------GGGGGFLFFGDDLY--DSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGLK-----NLPV 262 (380)
Q Consensus 199 ~i~~~Fs~~l~---------~~~~G~l~~G~~~~--~~g~l~~~pl~~~~~~~w~v~l~~i~vg~~~~~~~-----~~~a 262 (380)
.++++||+||. ....|.|+||+++. +.|++.|+|+.+. .+|+|.|++|+++++.+... ...+
T Consensus 146 ~i~~~FS~~l~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~~v~l~~i~v~g~~~~~~~~~~~~~~a 223 (383)
T 2ewy_A 146 NIPNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIKEE--WYYQIEILKLEIGGQSLNLDCREYNADKA 223 (383)
T ss_dssp TCCSCEEEEECCC---------CCEEEEETSCCGGGCCSCEEEEECSSB--TTBBCCEEEEEETTEECCCCTTTTTSSCE
T ss_pred CCCcceEEEeeccccccccCCCCCeEEEeCccchhhccCccEEEecCCC--ceEEEEEEEEEECCEEccccccccCCccE
Confidence 88889999985 23589999999864 6799999999986 69999999999999987643 3589
Q ss_pred EEcccccceeeCHHHHHHHHHHHHHHhccCCCccCCC---CCCcCcccccccCCccccccccccceEEEEEecCC--CCe
Q 016916 263 VFDSGSSYTYLNRVTYQTLTSIMKKELSAKSLKEAPE---DETLPLCWKGRRPFKNVHDVKKCFRTLALSFTDGK--TRT 337 (380)
Q Consensus 263 iiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~---~~~~~~C~~~~~~~~~~~~~~~~~P~l~f~f~g~~--~~~ 337 (380)
||||||++++||+++|++|.++|.++.... .... .....+|+.... .....+|+|+|+|+|.. ...
T Consensus 224 iiDSGTt~~~lP~~~~~~l~~~i~~~~~~~---~~~~~~~~~~~~~C~~~~~------~~~~~~P~i~f~f~g~~~~~~~ 294 (383)
T 2ewy_A 224 IVDSGTTLLRLPQKVFDAVVEAVARASLIP---EFSDGFWTGSQLACWTNSE------TPWSYFPKISIYLRDENSSRSF 294 (383)
T ss_dssp EECTTCSSEEEEHHHHHHHHHHHHHTTCSS---CCCHHHHHTSEEEEECSSS------CGGGGSCCEEEEEECSSTTEEE
T ss_pred EEEcCCccccCCHHHHHHHHHHHhhhcccc---cCccccccccccccccCCc------ccHhhCCcEEEEECCCCCCceE
Confidence 999999999999999999999998865411 1100 112457987532 12246899999999721 014
Q ss_pred EEEEcCCeEEEEeC---CCeEEEEEE-eCCcCCCCCeeEEcccc
Q 016916 338 LFELTPEAYLIISN---KGNVCLGIL-NGAEVGLQDLNVIGGIG 377 (380)
Q Consensus 338 ~~~l~~~~y~~~~~---~~~~C~~~~-~~~~~~~~~~~IlG~~~ 377 (380)
+++|++++|+++.. .+..|+++. ... .+.||||+++
T Consensus 295 ~~~l~~~~yi~~~~~~~~~~~C~~~~i~~~----~~~~ILG~~f 334 (383)
T 2ewy_A 295 RITILPQLYIQPMMGAGLNYECYRFGISPS----TNALVIGATV 334 (383)
T ss_dssp EEEECHHHHEEEECCCTTCSEEEEESEEEE----SSCEEECHHH
T ss_pred EEEEChHHheeecccCCCCceeEEEEecCC----CCcEEEChHH
Confidence 89999999999864 256898642 211 2469999975
No 29
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=5.4e-46 Score=368.72 Aligned_cols=281 Identities=17% Similarity=0.219 Sum_probs=225.1
Q ss_pred EEEEecCCCCCeeEEEEEEecCCCcEEEEEEEcCCCceEEeCCCCCC--CCCCCCCCCCCCCCCCCCCCCccccCcCCCC
Q 016916 38 LFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCV--RCVEAPHPLYRPSNDLVPCEDPICASLHAPG 115 (380)
Q Consensus 38 ~lpl~~~~~~~~~y~~~i~vGtP~Q~~~v~~DTGSs~~wv~~~~~c~--~C~~~~~~~f~p~~S~~~c~~~~c~~~~~~~ 115 (380)
.+||.. +.+.+|+++|+||||||++.|++||||+++||+|. .|. .|. .++.|+|++|+. ++
T Consensus 128 ~~pL~n--~~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~-~C~s~~C~--~~~~ydps~SsT------~~------ 190 (451)
T 3qvc_A 128 NVELKD--LANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSI-KCTSESCE--SKNHYDSSKSKT------YE------ 190 (451)
T ss_dssp CCCGGG--GBCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBT-TCCSGGGT--TSCCBCGGGCTT------CE------
T ss_pred ccceee--cCCCEEEEEEEECCCCcEEEEEEcCCCccEEEecC-CCCccccC--CCCCCCCCCCcc------cc------
Confidence 456664 24779999999999999999999999999999999 894 675 478999998841 11
Q ss_pred CCCCCCCCCCceeEEeCCCCeEEEEEEEEEEEEeecCCCcCCCceEEeeeEe----cCCCCCCCCcceEEeeCCCC----
Q 016916 116 HHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYN----QVPGASYHPLDGILGLGKGK---- 187 (380)
Q Consensus 116 ~~~c~~~~~~~~~i~Y~~Gs~~~G~l~~D~v~l~~~~g~~~~~~~~FG~~~~----~~~~~~~~~~~GIlGLg~~~---- 187 (380)
..+|.|.+.|++|+ +.|.+++|+|+|+ +..++ +.|||++. ... +.....+||||||++.
T Consensus 191 ------~~~~~f~i~YgdGs-~~G~~~~Dtv~ig----g~~v~-~~Fg~a~~t~~~~~~-f~~~~~dGILGLg~~~~s~~ 257 (451)
T 3qvc_A 191 ------KDDTPVKLTSKAGT-ISGIFSKDLVTIG----KLSVP-YKFIEMTEIVGFEPF-YSESDVDGVFGLGWKDLSIG 257 (451)
T ss_dssp ------EEEEEEEEECSSEE-EEEEEEEEEEEET----TEEEE-EEEEEEEEEEECTTH-HHHSCCCEEEECSSBCSSSS
T ss_pred ------cCCCEEEEEECCCE-EEEEEEEEEEEEC----CEEEE-EEEEEEEeccccCCC-ccCCCCCEEEecCCCccccc
Confidence 13679999999995 9999999999995 56677 99999988 432 2334579999999975
Q ss_pred --Cchhhhccccccc-cceeeeeecCC--CceeEEECCCCC--CCCCcEEeecccCCCCCeeEEeeEEEECCEEeeeCCC
Q 016916 188 --SSIVSQLHSQKLI-RNVVGHCLSGG--GGGFLFFGDDLY--DSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGLKNL 260 (380)
Q Consensus 188 --~s~~~~l~~~g~i-~~~Fs~~l~~~--~~G~l~~G~~~~--~~g~l~~~pl~~~~~~~w~v~l~~i~vg~~~~~~~~~ 260 (380)
.+++.+|+++|+| +++||+||.+. ..|.|+|||+|. +.|++.|+|+... .+|.|.++ |+++++ .....
T Consensus 258 ~~~~~~~~L~~qg~I~~~~FS~~L~~~~~~~G~l~fGgiD~s~y~G~l~~~pv~~~--~~w~v~l~-I~Vgg~--~~~~~ 332 (451)
T 3qvc_A 258 SIDPYIVELKTQNKIEQAVYSIYLPPENKNKGYLTIGGIEERFFDGPLNYEKLNHD--LMWQVDLD-VHFGNV--SSKKA 332 (451)
T ss_dssp CCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEECSST--TSSEEEEE-EEETTE--EEEEE
T ss_pred CCCCHHHHHHHcCCCCCCEEEEEEcCCCCCCCEEEECCcchhhcCCceEEEEcccC--CeeEEEEE-EEECCc--cCCCc
Confidence 3578899999999 89999999853 489999999875 5699999999976 79999999 999998 33457
Q ss_pred CEEEcccccceeeCHHHHHHHHHHHHHHhccCCCccCCCCCCcCcccccccCCccccccccccceEEEEEecCCCCeEEE
Q 016916 261 PVVFDSGSSYTYLNRVTYQTLTSIMKKELSAKSLKEAPEDETLPLCWKGRRPFKNVHDVKKCFRTLALSFTDGKTRTLFE 340 (380)
Q Consensus 261 ~aiiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~l~f~f~g~~~~~~~~ 340 (380)
.+|+||||++++||++++++|.+++.+... .. ......+|. . ..+|+|+|+|+| .+++
T Consensus 333 ~aiiDSGTt~i~lP~~~~~~i~~~i~a~~~-----~~-~g~y~v~C~-~-----------~~~P~itf~fgg----~~i~ 390 (451)
T 3qvc_A 333 NVILDSATSVITVPTEFFNQFVESASVFKV-----PF-LSLYVTTCG-N-----------TKLPTLEYRSPN----KVYT 390 (451)
T ss_dssp EEEECTTBSSEEECHHHHHHHHTTTTCEEC-----TT-SSCEEEETT-C-----------TTCCCEEEEETT----EEEE
T ss_pred eEEEeCCCccccCCHHHHHHHHHHcCCeec-----CC-CCeEEeeCC-c-----------CcCCcEEEEECC----EEEE
Confidence 899999999999999999999988854322 10 122235686 2 358999999986 9999
Q ss_pred EcCCeEEEEeCC--CeEEEE-EEeCCcCCCCCeeEEcccc
Q 016916 341 LTPEAYLIISNK--GNVCLG-ILNGAEVGLQDLNVIGGIG 377 (380)
Q Consensus 341 l~~~~y~~~~~~--~~~C~~-~~~~~~~~~~~~~IlG~~~ 377 (380)
||+++|+++..+ +..|+. +...... ...||||+++
T Consensus 391 lp~~~yi~~~~~~~~~~C~~~i~~~~~~--~~~~ILG~~F 428 (451)
T 3qvc_A 391 LEPKQYLEPLENIFSALCMLNIVPIDLE--KNTFVLGDPF 428 (451)
T ss_dssp ECHHHHEEECTTTSTTEEEECEEECCCS--TTEEEECHHH
T ss_pred EcHHHheeecccCCCCeEEEEEEeCCCC--CCCEEECHHH
Confidence 999999998753 467984 5544311 3589999864
No 30
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=1.5e-44 Score=355.14 Aligned_cols=293 Identities=17% Similarity=0.209 Sum_probs=220.7
Q ss_pred CeeEEEEEEecCCCcEEEEEEEcCCCceEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCcCCCCCCCCCCCCCCce
Q 016916 48 TGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAPGHHNCEDPAQCDY 127 (380)
Q Consensus 48 ~~~y~~~i~vGtP~Q~~~v~~DTGSs~~wv~~~~~c~~C~~~~~~~f~p~~S~~~c~~~~c~~~~~~~~~~c~~~~~~~~ 127 (380)
+..|+++|+||||||+++|+|||||+++||+|. +| |. .++.|+|++|+. ++. ..|.|
T Consensus 27 ~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~-~c--~~--~~~~y~~~~SsT------~~~------------~~~~~ 83 (402)
T 3vf3_A 27 GQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAA-PH--PF--LHRYYQRQLSST------YRD------------LRKGV 83 (402)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECS-CC--TT--CSCCCCGGGCTT------CEE------------EEEEE
T ss_pred CCEEEEEEEECCCCeEEEEEEeCCCCceEEccC-CC--Cc--ccCCcCcccCcc------ccc------------CCCEE
Confidence 348999999999999999999999999999998 77 43 368999998851 111 36799
Q ss_pred eEEeCCCCeEEEEEEEEEEEEeecCCCcCCC-ceEEeeeEecCCCC-CCCCcceEEeeCCCCC--------chhhhcccc
Q 016916 128 ELEYADGGSSLGVLVKDAFAFNYTNGQRLNP-RLALGCGYNQVPGA-SYHPLDGILGLGKGKS--------SIVSQLHSQ 197 (380)
Q Consensus 128 ~i~Y~~Gs~~~G~l~~D~v~l~~~~g~~~~~-~~~FG~~~~~~~~~-~~~~~~GIlGLg~~~~--------s~~~~l~~~ 197 (380)
.+.|++| ++.|.+++|+|+|++ ...+. .+.|+++......+ .....+||||||+... +++.+|+++
T Consensus 84 ~i~Yg~G-s~~G~~~~D~v~ig~---~~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q 159 (402)
T 3vf3_A 84 YVPYTQG-KWEGELGTDLVSIPH---GPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQ 159 (402)
T ss_dssp EEECSSC-EEEEEEEEEEEECTT---SCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHH
T ss_pred EEEECcE-EEEEEEEEEEEEECC---ccccceeeeEEEEEccccccccCCCccceEEcCchhhcccCCcCCcHHHHHHHc
Confidence 9999999 579999999999963 22232 34578877654332 2456899999998743 567789999
Q ss_pred ccccceeeeeecC------------CCceeEEECCCCC--CCCCcEEeecccCCCCCeeEEeeEEEECCEEeeeC-----
Q 016916 198 KLIRNVVGHCLSG------------GGGGFLFFGDDLY--DSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGLK----- 258 (380)
Q Consensus 198 g~i~~~Fs~~l~~------------~~~G~l~~G~~~~--~~g~l~~~pl~~~~~~~w~v~l~~i~vg~~~~~~~----- 258 (380)
++|+++||+||.. ...|.|+||+++. +.|++.|+|+... .+|.|.+++|+++++.+...
T Consensus 160 ~~i~~~FS~~l~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~w~v~l~~i~v~g~~~~~~~~~~~ 237 (402)
T 3vf3_A 160 THVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRRE--WYYEVIIVRVEINGQDLKMDCKEYN 237 (402)
T ss_dssp SCCCSCEEEEECCCC-------------EEEEESSCCGGGEEEEEEEEECSSB--TTBEECEEEEEETTEECCCCGGGGG
T ss_pred cCCccceEEEeecccccccccccccCCCCEEEeCCcCcccccCceEEEeCCcC--cEEEEEEeEEEECCEEecccccccC
Confidence 9998899999952 3489999999874 5799999999986 69999999999999988653
Q ss_pred CCCEEEcccccceeeCHHHHHHHHHHHHHHhccCCCccCCCCCCcCcccccccCCccccccccccceEEEEEecCC--CC
Q 016916 259 NLPVVFDSGSSYTYLNRVTYQTLTSIMKKELSAKSLKEAPEDETLPLCWKGRRPFKNVHDVKKCFRTLALSFTDGK--TR 336 (380)
Q Consensus 259 ~~~aiiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~l~f~f~g~~--~~ 336 (380)
...+||||||++++||+++|++|.+++.++....++..........+|+.... ..+..+|+|+|+|+|.. ..
T Consensus 238 ~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~------~~~~~~P~i~f~f~g~~~~~~ 311 (402)
T 3vf3_A 238 YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGT------TPWNIFPVISLYLMGEVTNQS 311 (402)
T ss_dssp SSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCTTGGGTCSCEEEETTC------CCGGGSCCEEEEEECSSTTEE
T ss_pred CCeEEEECCCCcccCCHHHHHHHHHHHhhhccccccCcccccccccccccccc------chHhhCCceEEEEecCCCCce
Confidence 46899999999999999999999999998854111111100112468987542 12246899999999721 01
Q ss_pred eEEEEcCCeEEEEeCCC----eEEEEEEeCCcCCCCCeeEEccccc
Q 016916 337 TLFELTPEAYLIISNKG----NVCLGILNGAEVGLQDLNVIGGIGD 378 (380)
Q Consensus 337 ~~~~l~~~~y~~~~~~~----~~C~~~~~~~~~~~~~~~IlG~~~~ 378 (380)
.+++|+|++|+++..+. ..|+++.... ..+.||||+++.
T Consensus 312 ~~~~l~~~~yi~~~~~~~~~~~~C~~~~~~~---~~~~~ILG~~fl 354 (402)
T 3vf3_A 312 FRITILPQQYLRPVEDVATSQDDCYKFAISQ---SSTGTVMGAVIM 354 (402)
T ss_dssp EEEEECHHHHEEECCCGGGTTEEEEEECEEE---ESSCEEECHHHH
T ss_pred EEEEECHHHheehhccCCCCCceEEEEeccC---CCCcEEEChHHh
Confidence 26999999999986542 4899742211 134799999763
No 31
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=8.9e-45 Score=356.02 Aligned_cols=290 Identities=18% Similarity=0.224 Sum_probs=219.7
Q ss_pred CeeEEEEEEecCCCcEEEEEEEcCCCceEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCcCCCCCCCCCCCCCCce
Q 016916 48 TGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAPGHHNCEDPAQCDY 127 (380)
Q Consensus 48 ~~~y~~~i~vGtP~Q~~~v~~DTGSs~~wv~~~~~c~~C~~~~~~~f~p~~S~~~c~~~~c~~~~~~~~~~c~~~~~~~~ 127 (380)
+..|+++|+||||||++.|+|||||+++||+|. +|..| ++.|+|++|+ +++. ..|.|
T Consensus 20 ~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~-~c~~~----~~~y~~~~Ss------T~~~------------~~~~~ 76 (395)
T 2qp8_A 20 GQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAA-PHPFL----HRYYQRQLSS------TYRD------------LRKGV 76 (395)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECS-CCTTC----SCCCCGGGCT------TCEE------------EEEEE
T ss_pred CceEEEEEEecCCCceEEEEEecCCCceEEECC-CCccc----cCCcCcccCC------Ccee------------CCceE
Confidence 458999999999999999999999999999998 88655 5789998884 1111 35799
Q ss_pred eEEeCCCCeEEEEEEEEEEEEeecCCCcCCC-ceEEeeeEecCCCCC-CCCcceEEeeCCCCC--------chhhhcccc
Q 016916 128 ELEYADGGSSLGVLVKDAFAFNYTNGQRLNP-RLALGCGYNQVPGAS-YHPLDGILGLGKGKS--------SIVSQLHSQ 197 (380)
Q Consensus 128 ~i~Y~~Gs~~~G~l~~D~v~l~~~~g~~~~~-~~~FG~~~~~~~~~~-~~~~~GIlGLg~~~~--------s~~~~l~~~ 197 (380)
++.|++| ++.|.+++|+|+|+. +..+. .+.|++.......+. ....+||||||+..+ +++.+|++|
T Consensus 77 ~i~Yg~G-s~~G~~~~Dtv~ig~---g~~~~~~~~~~~~~~~~~~f~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~l~~q 152 (395)
T 2qp8_A 77 YVPYTQG-KWEGELGTDLVSIPH---GPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQ 152 (395)
T ss_dssp EEECSSC-EEEEEEEEEEEECTT---SCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHH
T ss_pred EEEECCc-EEEEEEEeEEEEECC---CCCceEEEEEEEEEccCcccccccCccceEEcCchhhccCCCCCCCHHHHHHHc
Confidence 9999999 569999999999962 22222 366887765533322 356899999999754 456789999
Q ss_pred ccccceeeeeecC------------CCceeEEECCCCC--CCCCcEEeecccCCCCCeeEEeeEEEECCEEeeeC-----
Q 016916 198 KLIRNVVGHCLSG------------GGGGFLFFGDDLY--DSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGLK----- 258 (380)
Q Consensus 198 g~i~~~Fs~~l~~------------~~~G~l~~G~~~~--~~g~l~~~pl~~~~~~~w~v~l~~i~vg~~~~~~~----- 258 (380)
+.++++||+||.+ ...|.|+||+++. +.|++.|+|+.+. .+|.|.|++|+++++.+...
T Consensus 153 ~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~~v~l~~i~v~g~~~~~~~~~~~ 230 (395)
T 2qp8_A 153 THVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRRE--WYYEVIIVRVEINGQDLKMDCKEYN 230 (395)
T ss_dssp SCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSB--TTBBCCEEEEEETTEECCCCGGGGG
T ss_pred cCCcceEEEEeccccccccccccccCCCcEEEECCcCcccccCceEEeccCCC--ceEEEEEEEEEECCEEcccCccccC
Confidence 9888899999963 2589999999874 5689999999876 69999999999999987542
Q ss_pred CCCEEEcccccceeeCHHHHHHHHHHHHHHhccCCCccCCCCCCcCcccccccCCccccccccccceEEEEEecCCC--C
Q 016916 259 NLPVVFDSGSSYTYLNRVTYQTLTSIMKKELSAKSLKEAPEDETLPLCWKGRRPFKNVHDVKKCFRTLALSFTDGKT--R 336 (380)
Q Consensus 259 ~~~aiiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~l~f~f~g~~~--~ 336 (380)
...+||||||++++||+++|++|.++|.++.....+..........+|+.... .....+|+|+|+|+|... .
T Consensus 231 ~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~------~~~~~~P~i~f~f~g~~~~~~ 304 (395)
T 2qp8_A 231 YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGT------TPWNIFPVISLYLMGEVTNQS 304 (395)
T ss_dssp SSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTTC------CCGGGSCCEEEEEECSSTTEE
T ss_pred CceEEEEcCCCcEecCHHHHHHHHHHHhhhcccccCCcccccccccccccccc------chHhhCCcEEEEEccCCCCce
Confidence 36899999999999999999999999988754211000000112357987532 122468999999997210 1
Q ss_pred eEEEEcCCeEEEEeCC----CeEEEE--EEeCCcCCCCCeeEEcccc
Q 016916 337 TLFELTPEAYLIISNK----GNVCLG--ILNGAEVGLQDLNVIGGIG 377 (380)
Q Consensus 337 ~~~~l~~~~y~~~~~~----~~~C~~--~~~~~~~~~~~~~IlG~~~ 377 (380)
.+|+|+|++|+++..+ ...|++ +... +..||||+++
T Consensus 305 ~~~~l~p~~yi~~~~~~~~~~~~C~~~~i~~~-----~~~~ILG~~f 346 (395)
T 2qp8_A 305 FRITILPQQYLRPVEDVATSQDDCYKFAISQS-----STGTVMGAVI 346 (395)
T ss_dssp EEEEECHHHHEEEECCTTCCSCEEEEECEEEE-----SSCEEECHHH
T ss_pred EEEEECHHHhEeecccCCCCCceEEEEEecCC-----CCcEEEChHH
Confidence 3799999999998643 248974 3322 2479999975
No 32
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=6.5e-45 Score=363.16 Aligned_cols=293 Identities=18% Similarity=0.210 Sum_probs=223.6
Q ss_pred CeeEEEEEEecCCCcEEEEEEEcCCCceEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCcCCCCCCCCCCCCCCce
Q 016916 48 TGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAPGHHNCEDPAQCDY 127 (380)
Q Consensus 48 ~~~y~~~i~vGtP~Q~~~v~~DTGSs~~wv~~~~~c~~C~~~~~~~f~p~~S~~~c~~~~c~~~~~~~~~~c~~~~~~~~ 127 (380)
+..|+++|+||||||+++|+|||||+++||+|. +| |. .++.|+|++|+. ++. ..|.|
T Consensus 73 ~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~-~c--c~--~~~~y~~~~SsT------~~~------------~~~~~ 129 (455)
T 3lpj_A 73 GQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAA-PH--PF--LHRYYQRQLSST------YRD------------LRKGV 129 (455)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECS-CC--TT--CSCCCCGGGCTT------CEE------------EEEEE
T ss_pred CCEEEEEEEECCCCeEEEEEEcCCCcceEEecc-cc--cc--cCCcccCCCCCC------ccc------------CCccE
Confidence 348999999999999999999999999999998 77 43 478999998851 111 35799
Q ss_pred eEEeCCCCeEEEEEEEEEEEEeecCCCcCC-CceEEeeeEecCCCC-CCCCcceEEeeCCCCC--------chhhhcccc
Q 016916 128 ELEYADGGSSLGVLVKDAFAFNYTNGQRLN-PRLALGCGYNQVPGA-SYHPLDGILGLGKGKS--------SIVSQLHSQ 197 (380)
Q Consensus 128 ~i~Y~~Gs~~~G~l~~D~v~l~~~~g~~~~-~~~~FG~~~~~~~~~-~~~~~~GIlGLg~~~~--------s~~~~l~~~ 197 (380)
.+.|++| ++.|.+++|+|+|++ ...+ .++.|+++......+ .....+||||||+... +++.+|++|
T Consensus 130 ~i~Yg~G-s~~G~~~~Dtv~ig~---~~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q 205 (455)
T 3lpj_A 130 YVPYTQG-KWEGELGTDLVSIPH---GPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQ 205 (455)
T ss_dssp EEECSSC-EEEEEEEEEEEECTT---SCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHH
T ss_pred EEEeCCe-EEEEEEEEEEEEECC---CcceeeEEEEEEEEccCcccccCCCcceEEEeCccccccccCCCCcHHHHHHHc
Confidence 9999999 579999999999963 2222 246788887764433 2356899999998753 567789999
Q ss_pred ccccceeeeeecC------------CCceeEEECCCCC--CCCCcEEeecccCCCCCeeEEeeEEEECCEEeeeC-----
Q 016916 198 KLIRNVVGHCLSG------------GGGGFLFFGDDLY--DSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGLK----- 258 (380)
Q Consensus 198 g~i~~~Fs~~l~~------------~~~G~l~~G~~~~--~~g~l~~~pl~~~~~~~w~v~l~~i~vg~~~~~~~----- 258 (380)
++|+++||+||.+ ...|.|+||+++. +.|++.|+|+... .+|.|.+++|+++++.+...
T Consensus 206 ~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~w~v~l~~i~v~g~~~~~~~~~~~ 283 (455)
T 3lpj_A 206 THVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRRE--WYYEVIIVRVEINGQDLKMDCKEYN 283 (455)
T ss_dssp SCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSB--TTBBCCEEEEEETTEECCCCGGGGG
T ss_pred cCCCceeEEEeccccccccccccccCCCceEEECCcCcccccCceEEEecCCC--ceeEEEEeEEEECCEEccccccccC
Confidence 9998899999962 3589999999874 5799999999986 79999999999999988653
Q ss_pred CCCEEEcccccceeeCHHHHHHHHHHHHHHhccCCCccCCCCCCcCcccccccCCccccccccccceEEEEEecCCC--C
Q 016916 259 NLPVVFDSGSSYTYLNRVTYQTLTSIMKKELSAKSLKEAPEDETLPLCWKGRRPFKNVHDVKKCFRTLALSFTDGKT--R 336 (380)
Q Consensus 259 ~~~aiiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~l~f~f~g~~~--~ 336 (380)
...+||||||++++||+++|++|.++|.++....++..........+|+.... ..+..+|+|+|+|+|... .
T Consensus 284 ~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~g~~~~C~~~~~------~~~~~~P~i~f~f~g~~~~~~ 357 (455)
T 3lpj_A 284 YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGT------TPWNIFPVISLYLMGEVTNQS 357 (455)
T ss_dssp SSCEEECTTSSSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTTC------CCGGGSCCEEEEEECSSTTEE
T ss_pred CCeEEEECCCcceeCCHHHHHHHHHHhhhhccccccCcccccCcceecccccC------CchhcCCcEEEEEcCCCcCce
Confidence 46899999999999999999999999998754211110000122468987542 122458999999998210 1
Q ss_pred eEEEEcCCeEEEEeCCC----eEEEEEEeCCcCCCCCeeEEccccc
Q 016916 337 TLFELTPEAYLIISNKG----NVCLGILNGAEVGLQDLNVIGGIGD 378 (380)
Q Consensus 337 ~~~~l~~~~y~~~~~~~----~~C~~~~~~~~~~~~~~~IlG~~~~ 378 (380)
.+|+|++++|+++..+. ..|+++.... ..+.||||+++.
T Consensus 358 ~~~~l~~~~yi~~~~~~~~~~~~C~~f~~~~---~~~~~ILG~~fl 400 (455)
T 3lpj_A 358 FRITILPQQYLRPVEDVATSQDDCYKFAISQ---SSTGTVMGAVIM 400 (455)
T ss_dssp EEEEECHHHHEEEECCTTCCSCEEEEECEEE---ESSCEEECHHHH
T ss_pred EEEEECHHHheEeccCCCCCCceEEEEeccC---CCCcEEEChHHh
Confidence 26999999999987542 4899743221 134799999763
No 33
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=8.7e-44 Score=342.22 Aligned_cols=275 Identities=20% Similarity=0.251 Sum_probs=215.2
Q ss_pred EEEEecCCCCCeeEEEEEEecCCCcEEEEEEEcCCCceEEeCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCcCCCCCC
Q 016916 38 LFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCVRCVEAPHPLYRPSNDLVPCEDPICASLHAPGHH 117 (380)
Q Consensus 38 ~lpl~~~~~~~~~y~~~i~vGtP~Q~~~v~~DTGSs~~wv~~~~~c~~C~~~~~~~f~p~~S~~~c~~~~c~~~~~~~~~ 117 (380)
.+||... +.+|+++|.||||||++.|+|||||+++||+|. +.|+|++|+.
T Consensus 4 ~~~l~n~---~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~-----------~~y~~s~Ss~---------------- 53 (340)
T 1wkr_A 4 SVPATNQ---LVDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD-----------KSYVKTSTSS---------------- 53 (340)
T ss_dssp EEEEEEC---SSCEEEEEEETTTTEEEEEEEETTCCCCEECSS-----------SCCCCCTTCE----------------
T ss_pred cEeeecc---CcEEEEEEEECCCCcEEEEEEeCCChhheecCC-----------CccCCcCCcc----------------
Confidence 5677753 348999999999999999999999999999765 4699987731
Q ss_pred CCCCCCCCceeEEeCCCCeEEEEEEEEEEEEeecCCCcCCCceEEeeeEecCCCCCCCCcceEEeeCCCCC---------
Q 016916 118 NCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPGASYHPLDGILGLGKGKS--------- 188 (380)
Q Consensus 118 ~c~~~~~~~~~i~Y~~Gs~~~G~l~~D~v~l~~~~g~~~~~~~~FG~~~~~~~~~~~~~~~GIlGLg~~~~--------- 188 (380)
...|.|.+.|++| ++.|.+++|+|+|+ ...++++.|||++.... ....+||||||+...
T Consensus 54 ----~~~~~~~i~Yg~G-s~~G~~~~Dtv~~g----~~~v~~~~fg~~~~~~~---~~~~~GilGLg~~~~s~~~~~~~~ 121 (340)
T 1wkr_A 54 ----ATSDKVSVTYGSG-SFSGTEYTDTVTLG----SLTIPKQSIGVASRDSG---FDGVDGILGVGPVDLTVGTLSPHT 121 (340)
T ss_dssp ----EEEEEEEEECSSC-EEEEEEEEEEEEET----TEEEEEEEEEEEEEEES---CTTCSEEEECSCGGGGTTSEESCT
T ss_pred ----ccCceEEEEECCc-EEEEEEEEEEEEEC----CEEEcceEEEEEEccCC---CcCCCcEEECCccccccccccccc
Confidence 1367999999999 59999999999995 56788999999998643 236899999998754
Q ss_pred -----chhhhccccccc-cceeeeeecC-----CCceeEEECCCCC--CCCCcEEeecccCC--CCCeeEEeeEEEECC-
Q 016916 189 -----SIVSQLHSQKLI-RNVVGHCLSG-----GGGGFLFFGDDLY--DSSRVVWTSMSSDY--TKYYSPGVAELFFGG- 252 (380)
Q Consensus 189 -----s~~~~l~~~g~i-~~~Fs~~l~~-----~~~G~l~~G~~~~--~~g~l~~~pl~~~~--~~~w~v~l~~i~vg~- 252 (380)
+++.+|+++|+| +++||+||.+ ...|.|+||+++. +.|++.|+|+.... ..+|.|. .+|++++
T Consensus 122 ~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w~v~-~~i~v~~~ 200 (340)
T 1wkr_A 122 STSIPTVTDNLFSQGTIPTNLLAVSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYWGIN-QSIRYGSS 200 (340)
T ss_dssp TCCCCCHHHHHHHTTSSSSSEEEEECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSSEEE-EEEEETTT
T ss_pred cccCCCHHHHHHHcCCCCCCEEEEEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcceEEEE-eeEEECCC
Confidence 356789999999 8999999974 2579999999874 67999999999852 1799999 9999998
Q ss_pred EEeeeCCCCEEEcccccceeeCHHHHHHHHHHHHHHhccCCCccCCCCCCcCcccccccCCccccccccccceEEEEEec
Q 016916 253 ETTGLKNLPVVFDSGSSYTYLNRVTYQTLTSIMKKELSAKSLKEAPEDETLPLCWKGRRPFKNVHDVKKCFRTLALSFTD 332 (380)
Q Consensus 253 ~~~~~~~~~aiiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~l~f~f~g 332 (380)
+.+.. +..+||||||++++||+++|++|.+++.+... .. ......+|... ..+|+|+|+|+|
T Consensus 201 ~~l~~-~~~aiiDSGTt~~~lP~~~~~~l~~~~~a~~~-----~~-~g~~~~~C~~~-----------~~~p~i~f~f~g 262 (340)
T 1wkr_A 201 TSILS-STAGIVDTGTTLTLIASDAFAKYKKATGAVAD-----NN-TGLLRLTTAQY-----------ANLQSLFFTIGG 262 (340)
T ss_dssp EEEEE-EEEEEECTTBCSEEECHHHHHHHHHHHTCEEC-----TT-TSSEEECHHHH-----------HTCCCEEEEETT
T ss_pred eEccC-CCeEEEeCCcccccCCHHHHHHHHHhhCCEEc-----CC-CCeEEeecccc-----------ccCCcEEEEECC
Confidence 87753 46899999999999999999999877754322 10 11223568653 248999999986
Q ss_pred CCCCeEEEEcCCeEEEEeC-------CCeEEE-EEEeCCcC-CCCCeeEEcccc
Q 016916 333 GKTRTLFELTPEAYLIISN-------KGNVCL-GILNGAEV-GLQDLNVIGGIG 377 (380)
Q Consensus 333 ~~~~~~~~l~~~~y~~~~~-------~~~~C~-~~~~~~~~-~~~~~~IlG~~~ 377 (380)
.+++|+|++|+++.. +...|+ ++...... +.+..||||+++
T Consensus 263 ----~~~~i~~~~yi~~~~~~~~~g~~~~~c~~~~~~~~~~~~~~~~~iLG~~f 312 (340)
T 1wkr_A 263 ----QTFELTANAQIWPRNLNTAIGGSASSVYLIVGDLGSDSGEGLDFINGLTF 312 (340)
T ss_dssp ----EEEEECTGGGBCCGGGGGGGTCCSSCEEBCEEECSSCTTSSCCEEECHHH
T ss_pred ----EEEEEcHHHhccccccccccCCCCceEEEEEecCCCCCCCCcceEeChHh
Confidence 999999999998653 123565 56543211 123469999975
No 34
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=9.5e-42 Score=312.07 Aligned_cols=219 Identities=20% Similarity=0.315 Sum_probs=183.7
Q ss_pred EEEEecCCCCCeeEEEEEEecCCCcEEEEEEEcCCCceEEeCCCCCC---CCCCCCCCCCCCCCCCCCCCCccccCcCCC
Q 016916 38 LFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCV---RCVEAPHPLYRPSNDLVPCEDPICASLHAP 114 (380)
Q Consensus 38 ~lpl~~~~~~~~~y~~~i~vGtP~Q~~~v~~DTGSs~~wv~~~~~c~---~C~~~~~~~f~p~~S~~~c~~~~c~~~~~~ 114 (380)
.+||.. +.+.+|+++|.||||||++.|+|||||+++||+|. .|. .|.. ++.|+|++|+ +++.
T Consensus 4 ~~~l~n--~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~-~C~~~~~C~~--~~~y~~~~Ss------T~~~---- 68 (239)
T 1b5f_A 4 VVALTN--DRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSS-KCINSKACRA--HSMYESSDSS------TYKE---- 68 (239)
T ss_dssp EEEEEE--ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSCHHHHT--SCCBCGGGCT------TCEE----
T ss_pred eeeeee--cCCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcC-CCCCCcccCC--CCCCCCccCC------Ceee----
Confidence 467764 24679999999999999999999999999999999 896 6764 6789998884 1111
Q ss_pred CCCCCCCCCCCceeEEeCCCCeEEEEEEEEEEEEeecCCCcCCCceEEeeeEecCCC-CCCCCcceEEeeCCCCCc--hh
Q 016916 115 GHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYNQVPG-ASYHPLDGILGLGKGKSS--IV 191 (380)
Q Consensus 115 ~~~~c~~~~~~~~~i~Y~~Gs~~~G~l~~D~v~l~~~~g~~~~~~~~FG~~~~~~~~-~~~~~~~GIlGLg~~~~s--~~ 191 (380)
..|.|++.|++| ++.|.+++|+|+|+ ...++++.|||++..... +.....+||||||+...+ ++
T Consensus 69 --------~~~~~~i~Yg~G-s~~G~~~~D~v~~g----~~~v~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~p~~ 135 (239)
T 1b5f_A 69 --------NGTFGAIIYGTG-SITGFFSQDSVTIG----DLVVKEQDFIEATDEADNVFLHRLFDGILGLSFQTISVPVW 135 (239)
T ss_dssp --------EEEEEEEECSSC-EEEEEEEEEEEEET----TEEEEEEEEEEEEEECHHHHTTCSCCEEEECSCCSSSCCHH
T ss_pred --------CCcEEEEEECCC-cEEEEEEEEEEEEC----CcEEccEEEEEEEeccCccccccCcceEEecCccccccHHH
Confidence 356899999999 58999999999995 567789999999876432 334568999999999876 45
Q ss_pred hhccccccc-cceeeeeecC----CCceeEEECCCCC--CCCCcEEeecccCCCCCeeEEeeEEEECCEEeee--CCCCE
Q 016916 192 SQLHSQKLI-RNVVGHCLSG----GGGGFLFFGDDLY--DSSRVVWTSMSSDYTKYYSPGVAELFFGGETTGL--KNLPV 262 (380)
Q Consensus 192 ~~l~~~g~i-~~~Fs~~l~~----~~~G~l~~G~~~~--~~g~l~~~pl~~~~~~~w~v~l~~i~vg~~~~~~--~~~~a 262 (380)
.+|+++++| +++||+||.+ ...|.|+||++++ +.|++.|+|+.+. .+|.|.|++|+++++.+.. ....+
T Consensus 136 ~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~~v~l~~i~v~~~~~~~~~~~~~a 213 (239)
T 1b5f_A 136 YNMLNQGLVKERRFSFWLNRNVDEEEGGELVFGGLDPNHFRGDHTYVPVTYQ--YYWQFGIGDVLIGDKSTGFCAPGCQA 213 (239)
T ss_dssp HHHHHTTCCSSSEEEEEECCSCSSSCCEEEEETSCCGGGEEEEEEEEEEEEE--TTEEEEECCEEETTEECCTTTTCEEE
T ss_pred HHHHHCCCCCCCEEEEEEeCCCCCCCCeEEEECCcChhhccCceEEEEcccC--CeEEEEeeEEEECCEEecccCCCCEE
Confidence 678899999 8999999975 3589999999874 4689999999876 6999999999999998753 24689
Q ss_pred EEcccccceeeCHHHHHHHHHHHH
Q 016916 263 VFDSGSSYTYLNRVTYQTLTSIMK 286 (380)
Q Consensus 263 iiDSGTs~~~lp~~~~~~l~~~i~ 286 (380)
||||||++++||+++|++|.++|.
T Consensus 214 iiDTGTt~~~lP~~~~~~i~~~ig 237 (239)
T 1b5f_A 214 FADSGTSLLSGPTAIVTQINHAIG 237 (239)
T ss_dssp EECTTCSSEEECHHHHHHHHHHTT
T ss_pred EEecCcchhhCCHHHHHHHHHHhC
Confidence 999999999999999999988874
No 35
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=99.96 E-value=9.8e-30 Score=232.59 Aligned_cols=200 Identities=19% Similarity=0.240 Sum_probs=156.7
Q ss_pred CcCCCceEEeeeEecCCC-CCCCCcceEEeeCCCCC------chhhhccccccc-cceeeeeecCC----CceeEEECCC
Q 016916 154 QRLNPRLALGCGYNQVPG-ASYHPLDGILGLGKGKS------SIVSQLHSQKLI-RNVVGHCLSGG----GGGFLFFGDD 221 (380)
Q Consensus 154 ~~~~~~~~FG~~~~~~~~-~~~~~~~GIlGLg~~~~------s~~~~l~~~g~i-~~~Fs~~l~~~----~~G~l~~G~~ 221 (380)
+..++++.|||++..... +.....+||||||+... +++.+|+++|+| +++||+||.+. ..|.|+||++
T Consensus 2 g~~v~~~~Fg~~~~~~~~~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~ 81 (241)
T 1lya_B 2 GVKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGGT 81 (241)
T ss_dssp CEEEEEEEEEEEEECCSSTTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETSC
T ss_pred CeEECCeEEEEEEEccCCccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECCc
Confidence 356788999999987543 44567899999999764 466889999999 89999999853 2899999998
Q ss_pred CC--CCCCcEEeecccCCCCCeeEEeeEEEECCEEee-eCCCCEEEcccccceeeCHHHHHHHHHHHHHHhccCCCccCC
Q 016916 222 LY--DSSRVVWTSMSSDYTKYYSPGVAELFFGGETTG-LKNLPVVFDSGSSYTYLNRVTYQTLTSIMKKELSAKSLKEAP 298 (380)
Q Consensus 222 ~~--~~g~l~~~pl~~~~~~~w~v~l~~i~vg~~~~~-~~~~~aiiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~ 298 (380)
+. +.|++.|+|+.+. .+|+|.+++|+++++.+. .....+|+||||+++++|+++|++|.+++.+... .
T Consensus 82 d~~~~~g~l~~~p~~~~--~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~-----~-- 152 (241)
T 1lya_B 82 DSKYYKGSLSYLNVTRK--AYWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPVDEVRELQKAIGAVPL-----I-- 152 (241)
T ss_dssp CGGGEEEEEEEEECSSB--TTBEEEEEEEEETTSCEESTTCEEEEECTTCSSEEECHHHHHHHHHHHTCEEE-----E--
T ss_pred CHHHcCCceEEEECccc--cEEEEEEeEEEECCeeEeccCCCEEEEECCCccccCCHHHHHHHHHHhCCeec-----c--
Confidence 75 4699999999876 799999999999997743 3456899999999999999999999998854321 1
Q ss_pred CCCCcCcccccccCCccccccccccceEEEEEecCCCCeEEEEcCCeEEEEeCC--CeEEEE-EEeCCcC-CCCCeeEEc
Q 016916 299 EDETLPLCWKGRRPFKNVHDVKKCFRTLALSFTDGKTRTLFELTPEAYLIISNK--GNVCLG-ILNGAEV-GLQDLNVIG 374 (380)
Q Consensus 299 ~~~~~~~C~~~~~~~~~~~~~~~~~P~l~f~f~g~~~~~~~~l~~~~y~~~~~~--~~~C~~-~~~~~~~-~~~~~~IlG 374 (380)
......+|+.. ..+|+|+|+|+| ++++|++++|+++..+ +..|+. +...... +..+.||||
T Consensus 153 ~g~~~~~C~~~-----------~~~p~i~f~f~g----~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ilG 217 (241)
T 1lya_B 153 QGEYMIPCEKV-----------STLPAITLKLGG----KGYKLSPEDYTLKVSQAGKTLCLSGFMGMDIPPPSGPLWILG 217 (241)
T ss_dssp TTEEEEEGGGG-----------GGSCCEEEEETT----EEEEECTTTSEEEETTTTSSEEEESEEECCCCTTTCCCEEEC
T ss_pred CCcEEEECCCC-----------ccCCeEEEEECC----EEEEECHHHhEEEccCCCCCeeEEEEEecccCCCCCCeEEec
Confidence 11233568764 258999999975 9999999999998753 468994 6654321 124589999
Q ss_pred ccc
Q 016916 375 GIG 377 (380)
Q Consensus 375 ~~~ 377 (380)
+++
T Consensus 218 ~~f 220 (241)
T 1lya_B 218 DVF 220 (241)
T ss_dssp HHH
T ss_pred hHH
Confidence 974
No 36
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.83 E-value=1.1e-20 Score=147.47 Aligned_cols=88 Identities=22% Similarity=0.407 Sum_probs=74.3
Q ss_pred EEEEecCCCCCeeEEEEEEecCCCcEEEEEEEcCCCceEEeCCCCCC----CCCCCCCCCCCCCCCCCCCCCccccCcCC
Q 016916 38 LFQVHGNVYPTGYYNVTMYIGQPARPYFLDLDTGSDLTWLQCDAPCV----RCVEAPHPLYRPSNDLVPCEDPICASLHA 113 (380)
Q Consensus 38 ~lpl~~~~~~~~~y~~~i~vGtP~Q~~~v~~DTGSs~~wv~~~~~c~----~C~~~~~~~f~p~~S~~~c~~~~c~~~~~ 113 (380)
.+||.. +.+.+|+++|.||||||++.|+|||||+++||+|. +|. .|.. ++.|+|++|+ +++.
T Consensus 4 ~~~l~n--~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~-~C~~~~~~C~~--~~~y~p~~Ss------T~~~--- 69 (97)
T 1lya_A 4 PEVLKN--YMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSI-HCKLLDIACWI--HHKYNSDKSS------TYVK--- 69 (97)
T ss_dssp EEEEEE--ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCTTCHHHHT--SCCBCGGGCT------TCEE---
T ss_pred eEeeEE--CCCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEc-CccCcccccCC--CCCCCchhCC------Ccee---
Confidence 577763 24669999999999999999999999999999999 897 6864 7899999885 1111
Q ss_pred CCCCCCCCCCCCceeEEeCCCCeEEEEEEEEEEEEe
Q 016916 114 PGHHNCEDPAQCDYELEYADGGSSLGVLVKDAFAFN 149 (380)
Q Consensus 114 ~~~~~c~~~~~~~~~i~Y~~Gs~~~G~l~~D~v~l~ 149 (380)
..|.|.+.|++|+ +.|.+++|+|+|+
T Consensus 70 ---------~~~~~~i~Yg~Gs-~~G~~~~Dtv~i~ 95 (97)
T 1lya_A 70 ---------NGTSFDIHYGSGS-LSGYLSQDTVSVP 95 (97)
T ss_dssp ---------EEEEEEEECSSCE-EEEEEEEEEEEES
T ss_pred ---------CCCcEEEEECCcE-EEEEEEEEEEEEC
Confidence 3679999999995 9999999999996
No 37
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=98.13 E-value=1.9e-06 Score=64.97 Aligned_cols=52 Identities=21% Similarity=0.398 Sum_probs=39.4
Q ss_pred ccceEEEEEecCCCCeEEEEcCCeEEEEeCC--CeEEEE-EEeCCcCCCCCeeEEcccc
Q 016916 322 CFRTLALSFTDGKTRTLFELTPEAYLIISNK--GNVCLG-ILNGAEVGLQDLNVIGGIG 377 (380)
Q Consensus 322 ~~P~l~f~f~g~~~~~~~~l~~~~y~~~~~~--~~~C~~-~~~~~~~~~~~~~IlG~~~ 377 (380)
.+|+|+|+|+| ++++|+|++|+++... +..|++ +...+..+.++.|||||++
T Consensus 12 ~~P~i~f~~gg----~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~ILGd~F 66 (87)
T 1b5f_B 12 SMPNVSFTIGG----KKFGLTPEQYILKVGKGEATQCISGFTAMDATLLGPLWILGDVF 66 (87)
T ss_dssp GCCCEEEEETT----EEEEECHHHHEEEESCTTTCEEEESEEECCCBSSSBEEEECHHH
T ss_pred cCCcEEEEECC----EEEEECHHHhEEEccCCCCCEEEEEEEECCCCCCCCeEEechHH
Confidence 58999999986 9999999999998653 368994 6553211124589999975
No 38
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=79.49 E-value=1.7 Score=35.19 Aligned_cols=30 Identities=20% Similarity=0.218 Sum_probs=26.5
Q ss_pred CeeEEEEEEecCCCcEEEEEEEcCCCceEEeC
Q 016916 48 TGYYNVTMYIGQPARPYFLDLDTGSDLTWLQC 79 (380)
Q Consensus 48 ~~~y~~~i~vGtP~Q~~~v~~DTGSs~~wv~~ 79 (380)
.+.+++++.|+ .+++++++|||++.+.+..
T Consensus 24 ~~~~~v~v~In--G~~~~~LvDTGAs~s~is~ 53 (148)
T 2i1a_A 24 VPMLYINIEIN--NYPVKAFVDTGAQTTIMST 53 (148)
T ss_dssp CCCCEEEEEET--TEEEEEEECTTCSSCEEEH
T ss_pred cceEEEEEEEC--CEEEEEEEECCCCccccCH
Confidence 45789999998 7899999999999988864
No 39
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=79.12 E-value=2 Score=32.78 Aligned_cols=25 Identities=32% Similarity=0.440 Sum_probs=22.8
Q ss_pred EEEEEecCCCcEEEEEEEcCCCceEEe
Q 016916 52 NVTMYIGQPARPYFLDLDTGSDLTWLQ 78 (380)
Q Consensus 52 ~~~i~vGtP~Q~~~v~~DTGSs~~wv~ 78 (380)
++.+.|| .|.+.+++|||+.++-+.
T Consensus 10 ~v~v~I~--Gq~~e~LLDTGAD~TVl~ 34 (104)
T 1fmb_A 10 TTIVLIN--DTPLNVLLDTGADTSVLT 34 (104)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEEE
T ss_pred EEEEEEC--CEEEEEEeccCCCcEEEc
Confidence 5778999 799999999999999997
No 40
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=78.71 E-value=2.2 Score=32.24 Aligned_cols=27 Identities=37% Similarity=0.263 Sum_probs=23.4
Q ss_pred EEEEEecCCCcEEEEEEEcCCCceEEeCC
Q 016916 52 NVTMYIGQPARPYFLDLDTGSDLTWLQCD 80 (380)
Q Consensus 52 ~~~i~vGtP~Q~~~v~~DTGSs~~wv~~~ 80 (380)
++.+.|| .|.+.+++|||..++-+...
T Consensus 10 ~vtvkI~--Gq~~eaLLDTGAD~TVl~~~ 36 (99)
T 2hs1_A 10 LVTIKIG--GQLKEALLDTGADDTIIEEM 36 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSEEESCC
T ss_pred EEEEEEC--CEEEEEEeccCCCcEEEecc
Confidence 5678999 79999999999999998644
No 41
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=73.97 E-value=3.3 Score=31.27 Aligned_cols=27 Identities=37% Similarity=0.390 Sum_probs=23.5
Q ss_pred EEEEEecCCCcEEEEEEEcCCCceEEeCC
Q 016916 52 NVTMYIGQPARPYFLDLDTGSDLTWLQCD 80 (380)
Q Consensus 52 ~~~i~vGtP~Q~~~v~~DTGSs~~wv~~~ 80 (380)
++++.|| .|.+.+++|||.+++-+...
T Consensus 10 ~vti~I~--Gq~~e~LLDTGAD~TVl~~~ 36 (99)
T 3ec0_A 10 VVTAYIE--GQPVEVLLDTGADDSIVAGI 36 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEESSC
T ss_pred eEEEEEC--CEEEEEEEecCCCceEEcCc
Confidence 5678999 79999999999999998644
No 42
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=71.65 E-value=4 Score=31.55 Aligned_cols=29 Identities=21% Similarity=0.251 Sum_probs=24.0
Q ss_pred EEEEEec---CCCcEEEEEEEcCCCceEEeCC
Q 016916 52 NVTMYIG---QPARPYFLDLDTGSDLTWLQCD 80 (380)
Q Consensus 52 ~~~i~vG---tP~Q~~~v~~DTGSs~~wv~~~ 80 (380)
.+.|.|| +|+|.+..++|||..++-+...
T Consensus 12 lvtikI~~~~~~Gq~~eaLLDTGADdTVl~~~ 43 (116)
T 3liy_A 12 VIKAQVDTQTSHPKTIEALLDTGADMTVIPIA 43 (116)
T ss_dssp EEEEEEECSSSCCEEEEEEECTTBSSCEEEGG
T ss_pred eEEEEEccccCCCeEeEEEeccCCCccEEecc
Confidence 3455555 8899999999999999999865
No 43
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=69.78 E-value=3.8 Score=33.32 Aligned_cols=30 Identities=13% Similarity=0.241 Sum_probs=26.4
Q ss_pred eeEEEEEEecCCCcEEEEEEEcCCCceEEeCC
Q 016916 49 GYYNVTMYIGQPARPYFLDLDTGSDLTWLQCD 80 (380)
Q Consensus 49 ~~y~~~i~vGtP~Q~~~v~~DTGSs~~wv~~~ 80 (380)
..+++++.|. .+++++++|||++.+.+...
T Consensus 23 ~~l~v~~~In--g~~v~~LVDTGAs~s~Is~~ 52 (148)
T 3s8i_A 23 TMLYINCKVN--GHPLKAFVDSGAQMTIMSQA 52 (148)
T ss_dssp CCCEEEEEET--TEEEEEEECTTCSSCEEEHH
T ss_pred CEEEEEEEEC--CEEEEEEEeCCCCcEeeCHH
Confidence 3689999998 79999999999999999754
No 44
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=65.80 E-value=5.8 Score=30.83 Aligned_cols=24 Identities=33% Similarity=0.555 Sum_probs=21.4
Q ss_pred EEecCCCcEEEEEEEcCCCceEEeCC
Q 016916 55 MYIGQPARPYFLDLDTGSDLTWLQCD 80 (380)
Q Consensus 55 i~vGtP~Q~~~v~~DTGSs~~wv~~~ 80 (380)
+.|| .|.+.+++|||.+++-+.-.
T Consensus 18 ikI~--Gq~~eaLLDTGAD~TVi~~~ 41 (116)
T 2hah_A 18 IFVN--GYPIKFLLDTGADITVLNRR 41 (116)
T ss_dssp EEET--TEEEEEEECTTCSSCEEEGG
T ss_pred EEEC--CEEEEEEecCCCCcEEEccc
Confidence 8888 79999999999999998743
No 45
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=65.48 E-value=7.8 Score=31.03 Aligned_cols=29 Identities=10% Similarity=0.143 Sum_probs=23.7
Q ss_pred EEEECCEEeeeCCCCEEEcccccceeeCHHHHHH
Q 016916 247 ELFFGGETTGLKNLPVVFDSGSSYTYLNRVTYQT 280 (380)
Q Consensus 247 ~i~vg~~~~~~~~~~aiiDSGTs~~~lp~~~~~~ 280 (380)
.+.++|+.+ .+++|||++.+.++.+..+.
T Consensus 30 ~v~InG~~~-----~~LvDTGAs~s~is~~~a~~ 58 (148)
T 2i1a_A 30 NIEINNYPV-----KAFVDTGAQTTIMSTRLAKK 58 (148)
T ss_dssp EEEETTEEE-----EEEECTTCSSCEEEHHHHHH
T ss_pred EEEECCEEE-----EEEEECCCCccccCHHHHHH
Confidence 467888855 48999999999999887764
No 46
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=62.33 E-value=8.1 Score=31.30 Aligned_cols=30 Identities=17% Similarity=0.231 Sum_probs=24.4
Q ss_pred EEEECCEEeeeCCCCEEEcccccceeeCHHHHHHH
Q 016916 247 ELFFGGETTGLKNLPVVFDSGSSYTYLNRVTYQTL 281 (380)
Q Consensus 247 ~i~vg~~~~~~~~~~aiiDSGTs~~~lp~~~~~~l 281 (380)
.+.++++.+. +++|||++.+.++.+..+.+
T Consensus 28 ~~~Ing~~v~-----~LVDTGAs~s~Is~~~A~rl 57 (148)
T 3s8i_A 28 NCKVNGHPLK-----AFVDSGAQMTIMSQACAERC 57 (148)
T ss_dssp EEEETTEEEE-----EEECTTCSSCEEEHHHHHHT
T ss_pred EEEECCEEEE-----EEEeCCCCcEeeCHHHHHHc
Confidence 4557887664 89999999999999888754
No 47
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=60.81 E-value=9.1 Score=29.57 Aligned_cols=27 Identities=19% Similarity=0.463 Sum_probs=23.5
Q ss_pred EEEEEecCCCcEEEEEEEcCCCceEEeCC
Q 016916 52 NVTMYIGQPARPYFLDLDTGSDLTWLQCD 80 (380)
Q Consensus 52 ~~~i~vGtP~Q~~~v~~DTGSs~~wv~~~ 80 (380)
.+.+.+| .|.+..++|||.+++-+...
T Consensus 11 ~vti~I~--Gq~~eaLLDTGADdTVi~~~ 37 (114)
T 3sqf_A 11 SLTLWLD--DKMFTGLINTGADVTIIKLE 37 (114)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEEEGG
T ss_pred eEEEEEC--CEEEEEEEccCCCceEEecc
Confidence 4678888 79999999999999999754
No 48
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=53.68 E-value=12 Score=29.63 Aligned_cols=29 Identities=24% Similarity=0.383 Sum_probs=24.6
Q ss_pred eEEEEEEecCCCcEEEEEEEcCCCceEEeCC
Q 016916 50 YYNVTMYIGQPARPYFLDLDTGSDLTWLQCD 80 (380)
Q Consensus 50 ~y~~~i~vGtP~Q~~~v~~DTGSs~~wv~~~ 80 (380)
.=++.+.|+ .|.+.+++|||.+.+-+...
T Consensus 22 RP~v~i~I~--G~~~~~LlDTGAd~tVl~~~ 50 (132)
T 3slz_A 22 EPRITLKVG--GQPVTFLVDTGAQHSVLTQN 50 (132)
T ss_dssp SSEEEEEET--TEEEEEEECTTCSSCEECSC
T ss_pred CCEEEEEEC--CEEEEEEEeCCCCeEEEccc
Confidence 456778898 79999999999999998654
No 49
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=46.77 E-value=17 Score=31.09 Aligned_cols=28 Identities=36% Similarity=0.199 Sum_probs=23.9
Q ss_pred EEEEEEecCCCcEEEEEEEcCCCceEEeCC
Q 016916 51 YNVTMYIGQPARPYFLDLDTGSDLTWLQCD 80 (380)
Q Consensus 51 y~~~i~vGtP~Q~~~v~~DTGSs~~wv~~~ 80 (380)
-.+++.+| .|.+.+++|||.+++-+...
T Consensus 9 P~vtv~I~--Gq~~e~LLDTGAD~TVl~~~ 36 (203)
T 3ka2_A 9 PLVTIRIG--GQLKEALLDTGADDTVIEEL 36 (203)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEECSC
T ss_pred CeEEEEEC--CEEEEEEEecCCCceEEecc
Confidence 36778999 79999999999999998543
No 50
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=40.55 E-value=22 Score=27.82 Aligned_cols=22 Identities=23% Similarity=0.211 Sum_probs=18.6
Q ss_pred ecCCCcEEEEEEEcCCCceEEeCC
Q 016916 57 IGQPARPYFLDLDTGSDLTWLQCD 80 (380)
Q Consensus 57 vGtP~Q~~~v~~DTGSs~~wv~~~ 80 (380)
+| .|.+..++|||.+++-+...
T Consensus 27 i~--gq~~eaLLDTGAD~TVl~~~ 48 (124)
T 2rsp_A 27 QR--SVYITALLDSGADITIISEE 48 (124)
T ss_dssp CS--EEEEEEEECTTCSSCEEETT
T ss_pred CC--CEEEEEEecCCCCcEEEecc
Confidence 55 57889999999999999754
No 51
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=34.84 E-value=34 Score=25.61 Aligned_cols=32 Identities=16% Similarity=0.401 Sum_probs=26.1
Q ss_pred CCeeEEeeEEEECCEEeeeCCCCEEEcccccceeeCH
Q 016916 239 KYYSPGVAELFFGGETTGLKNLPVVFDSGSSYTYLNR 275 (380)
Q Consensus 239 ~~w~v~l~~i~vg~~~~~~~~~~aiiDSGTs~~~lp~ 275 (380)
..|+=.+..+.++++.+. +++|||.-.+.+..
T Consensus 4 ~l~~rP~vtvkI~Gq~~e-----aLLDTGAD~TVl~~ 35 (99)
T 2hs1_A 4 TLWKRPLVTIKIGGQLKE-----ALLDTGADDTIIEE 35 (99)
T ss_dssp CSSSCCEEEEEETTEEEE-----EEECTTCSSEEESC
T ss_pred cccCCCEEEEEECCEEEE-----EEeccCCCcEEEec
Confidence 357777888999998764 89999999888763
No 52
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=34.47 E-value=45 Score=28.80 Aligned_cols=41 Identities=20% Similarity=0.140 Sum_probs=27.8
Q ss_pred eEEEEEecCCCCCeeEEEE---EEecCC-----CcEEEEEEEcCCCceEEeCC
Q 016916 36 SLLFQVHGNVYPTGYYNVT---MYIGQP-----ARPYFLDLDTGSDLTWLQCD 80 (380)
Q Consensus 36 ~~~lpl~~~~~~~~~y~~~---i~vGtP-----~Q~~~v~~DTGSs~~wv~~~ 80 (380)
..-+|+... +.|.++ |.||.. .....++||||++++++|..
T Consensus 179 l~~~p~~~~----~~~~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~~ 227 (239)
T 1b5f_A 179 HTYVPVTYQ----YYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPTA 227 (239)
T ss_dssp EEEEEEEEE----TTEEEEECCEEETTEECCTTTTCEEEEECTTCSSEEECHH
T ss_pred eEEEEcccC----CeEEEEeeEEEECCEEecccCCCCEEEEecCcchhhCCHH
Confidence 345666543 246655 677752 34578999999999999853
No 53
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=33.54 E-value=39 Score=25.46 Aligned_cols=35 Identities=14% Similarity=0.275 Sum_probs=28.5
Q ss_pred CCeeEEeeEEEECCEEeeeCCCCEEEcccccceeeCHHHH
Q 016916 239 KYYSPGVAELFFGGETTGLKNLPVVFDSGSSYTYLNRVTY 278 (380)
Q Consensus 239 ~~w~v~l~~i~vg~~~~~~~~~~aiiDSGTs~~~lp~~~~ 278 (380)
..|+=.+..+.++++.+ .+++|||.-.+.+.....
T Consensus 4 ~l~~RP~v~v~I~Gq~~-----e~LLDTGAD~TVl~~~~w 38 (104)
T 1fmb_A 4 NLEKRPTTIVLINDTPL-----NVLLDTGADTSVLTTAHY 38 (104)
T ss_dssp CSSSCCEEEEEETTEEE-----EEEECTTCSSCEEEHHHH
T ss_pred eccCCCEEEEEECCEEE-----EEEeccCCCcEEEccccC
Confidence 35666778899999865 489999999999987655
No 54
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=30.76 E-value=60 Score=29.83 Aligned_cols=44 Identities=23% Similarity=0.277 Sum_probs=30.6
Q ss_pred CCCcEEeecccCCCCCeeEEeeEEEEC--CEEeeeCCCCEEEcccccceeeCHH
Q 016916 225 SSRVVWTSMSSDYTKYYSPGVAELFFG--GETTGLKNLPVVFDSGSSYTYLNRV 276 (380)
Q Consensus 225 ~g~l~~~pl~~~~~~~w~v~l~~i~vg--~~~~~~~~~~aiiDSGTs~~~lp~~ 276 (380)
+|.+...|+.......|.+ .|++| .+.+ .++||||++.+++|..
T Consensus 4 ~g~~~~~~l~~~~~~~Y~~---~i~iGtP~q~~-----~v~~DTGSs~~Wv~~~ 49 (361)
T 1mpp_A 4 DGSVDTPGLYDFDLEEYAI---PVSIGTPGQDF-----YLLFDTGSSDTWVPHK 49 (361)
T ss_dssp -CCEEEEEEEETTTTEEEE---EEEETTTTEEE-----EEEEETTCCCCEEEBT
T ss_pred CCccceEEeecCCCCEEEE---EEEECCCCcEE-----EEEEcCCCCCeEECCC
Confidence 4666777887643345544 57777 4444 4899999999999965
No 55
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=29.76 E-value=45 Score=24.92 Aligned_cols=31 Identities=16% Similarity=0.410 Sum_probs=25.5
Q ss_pred CCeeEEeeEEEECCEEeeeCCCCEEEcccccceeeC
Q 016916 239 KYYSPGVAELFFGGETTGLKNLPVVFDSGSSYTYLN 274 (380)
Q Consensus 239 ~~w~v~l~~i~vg~~~~~~~~~~aiiDSGTs~~~lp 274 (380)
..|+=.+..+.++++.+. +++|||.--+.+.
T Consensus 4 ~l~~RP~vti~I~Gq~~e-----~LLDTGAD~TVl~ 34 (99)
T 3ec0_A 4 SLWKRPVVTAYIEGQPVE-----VLLDTGADDSIVA 34 (99)
T ss_dssp CSSSCCEEEEEETTEEEE-----EEECTTCSSCEES
T ss_pred ccccCCeEEEEECCEEEE-----EEEecCCCceEEc
Confidence 467777888999999865 8999999888773
No 56
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=29.12 E-value=50 Score=25.42 Aligned_cols=31 Identities=29% Similarity=0.492 Sum_probs=26.2
Q ss_pred CCeeEEeeEEEECCEEeeeCCCCEEEcccccceeeCH
Q 016916 239 KYYSPGVAELFFGGETTGLKNLPVVFDSGSSYTYLNR 275 (380)
Q Consensus 239 ~~w~v~l~~i~vg~~~~~~~~~~aiiDSGTs~~~lp~ 275 (380)
..|+=.+. +.++++.+. +++|||.-.+.+..
T Consensus 10 ~l~~rP~v-ikI~Gq~~e-----aLLDTGAD~TVi~~ 40 (116)
T 2hah_A 10 LEKRPEIL-IFVNGYPIK-----FLLDTGADITVLNR 40 (116)
T ss_dssp SSSCCEEE-EEETTEEEE-----EEECTTCSSCEEEG
T ss_pred cccCCCEE-EEECCEEEE-----EEecCCCCcEEEcc
Confidence 47888888 999999764 89999999888774
No 57
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=28.79 E-value=65 Score=29.09 Aligned_cols=42 Identities=21% Similarity=0.426 Sum_probs=28.2
Q ss_pred CcEEeecccCCCCCeeEEeeEEEECC--EEeeeCCCCEEEcccccceeeCHH
Q 016916 227 RVVWTSMSSDYTKYYSPGVAELFFGG--ETTGLKNLPVVFDSGSSYTYLNRV 276 (380)
Q Consensus 227 ~l~~~pl~~~~~~~w~v~l~~i~vg~--~~~~~~~~~aiiDSGTs~~~lp~~ 276 (380)
+..-.||.......|.+ .|.+|. +.+ .+++|||++.+++|..
T Consensus 2 ~~~~~~l~n~~~~~Y~~---~i~iGtP~q~~-----~v~~DTGSs~~Wv~~~ 45 (323)
T 3cms_A 2 EVASVPLTNYLDSQYFG---KIYLGTPPQEF-----TVLFDTGSSDFWVPSI 45 (323)
T ss_dssp CCEEEEEEEETTTEEEE---EEEETTTTEEE-----EEEEETTCCCEEEEBT
T ss_pred CcceeeeEeccCCEEEE---EEEECCCCeEE-----EEEEeCCccceEEcCC
Confidence 44556666533245544 567774 443 4899999999999865
No 58
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=26.12 E-value=58 Score=27.73 Aligned_cols=27 Identities=37% Similarity=0.245 Sum_probs=23.2
Q ss_pred EEEEEecCCCcEEEEEEEcCCCceEEeCC
Q 016916 52 NVTMYIGQPARPYFLDLDTGSDLTWLQCD 80 (380)
Q Consensus 52 ~~~i~vGtP~Q~~~v~~DTGSs~~wv~~~ 80 (380)
.+++.+| .|.+..++|||..++-+...
T Consensus 114 ~~~iki~--Gq~~e~LlDTGAD~TVl~~~ 140 (203)
T 3ka2_A 114 LVTIRIG--GQLKEALLDTGADDTVIEEL 140 (203)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEECSC
T ss_pred cEEEEEC--CEEEeeeecccCCceeeecc
Confidence 5778898 79999999999999998543
No 59
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=25.22 E-value=61 Score=27.78 Aligned_cols=41 Identities=20% Similarity=0.217 Sum_probs=27.4
Q ss_pred eEEEEEecCCCCCeeEEE---EEEecCC----CcEEEEEEEcCCCceEEeCC
Q 016916 36 SLLFQVHGNVYPTGYYNV---TMYIGQP----ARPYFLDLDTGSDLTWLQCD 80 (380)
Q Consensus 36 ~~~lpl~~~~~~~~~y~~---~i~vGtP----~Q~~~v~~DTGSs~~wv~~~ 80 (380)
..-+|+... +.|.+ .|.||.- .....+++|||++.+++|..
T Consensus 90 l~~~p~~~~----~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~ 137 (241)
T 1lya_B 90 LSYLNVTRK----AYWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPVD 137 (241)
T ss_dssp EEEEECSSB----TTBEEEEEEEEETTSCEESTTCEEEEECTTCSSEEECHH
T ss_pred eEEEECccc----cEEEEEEeEEEECCeeEeccCCCEEEEECCCccccCCHH
Confidence 345566532 24544 4678753 24578999999999999854
No 60
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=24.24 E-value=1.1e+02 Score=27.51 Aligned_cols=44 Identities=23% Similarity=0.304 Sum_probs=28.9
Q ss_pred CCeEEEEEecCCCCCeeEEEE---EEecC-CCcEEEEEEEcCCCceEEeCC
Q 016916 34 GSSLLFQVHGNVYPTGYYNVT---MYIGQ-PARPYFLDLDTGSDLTWLQCD 80 (380)
Q Consensus 34 ~~~~~lpl~~~~~~~~~y~~~---i~vGt-P~Q~~~v~~DTGSs~~wv~~~ 80 (380)
+...-+|+..+ .+.|.++ |.||. +.....+++|||++++++|..
T Consensus 177 g~l~~~p~~~~---~~~w~v~l~~i~v~~~~~~~~~aiiDSGTs~~~lP~~ 224 (323)
T 1bxo_A 177 GSLTYTGVDNS---QGFWSFNVDSYTAGSQSGDGFSGIADTGTTLLLLDDS 224 (323)
T ss_dssp SCCEEEECBCT---TSSCEEEEEEEEETTEEEEEEEEEECTTCSSEEECHH
T ss_pred CceEEEECCCC---CCeEEEEEeeEEECCccCCCceEEEeCCCCceeCCHH
Confidence 34456777522 2245444 56764 334678999999999999854
No 61
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=23.88 E-value=91 Score=28.14 Aligned_cols=44 Identities=25% Similarity=0.407 Sum_probs=28.8
Q ss_pred CCeEEEEEecCCCCCeeEEE---EEEecCC--CcEEEEEEEcCCCceEEeCC
Q 016916 34 GSSLLFQVHGNVYPTGYYNV---TMYIGQP--ARPYFLDLDTGSDLTWLQCD 80 (380)
Q Consensus 34 ~~~~~lpl~~~~~~~~~y~~---~i~vGtP--~Q~~~v~~DTGSs~~wv~~~ 80 (380)
+...-+|+... .+.|.+ .|.||.+ .....+++|||++++++|..
T Consensus 181 g~l~~~p~~~~---~~~~~v~l~~i~vg~~~~~~~~~~iiDSGTs~~~lP~~ 229 (325)
T 2apr_A 181 GSLTTVPIDNS---RGWWGITVDRATVGTSTVASSFDGILDTGTTLLILPNN 229 (325)
T ss_dssp SCCEEEECBCT---TSSCEEEECEEEETTEEEECCEEEEECTTCSSEEEEHH
T ss_pred CceEEEEccCC---CCEEEEEEeEEEECCEecCCCceEEEecCCccEECCHH
Confidence 34456777522 224544 3677752 34578999999999999854
No 62
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=23.82 E-value=76 Score=28.67 Aligned_cols=43 Identities=23% Similarity=0.318 Sum_probs=28.5
Q ss_pred CCcEEeecccCCCCCeeEEeeEEEECCEEeeeCCCCEEEcccccceeeCHHHH
Q 016916 226 SRVVWTSMSSDYTKYYSPGVAELFFGGETTGLKNLPVVFDSGSSYTYLNRVTY 278 (380)
Q Consensus 226 g~l~~~pl~~~~~~~w~v~l~~i~vg~~~~~~~~~~aiiDSGTs~~~lp~~~~ 278 (380)
+.+.-.|+... ..|.+ .|++|.+.+ .++||||++.+++|..-.
T Consensus 4 ~~v~~~~~~~~--~~Y~~---~i~iG~q~~-----~v~~DTGSs~lWv~~~~C 46 (323)
T 1izd_A 4 GSVTTNPTSND--EEYIT---QVTVGDDTL-----GLDFDTGSADLWVFSSQT 46 (323)
T ss_dssp EEEEEEECGGG--CCEEE---EEEETTEEE-----EEEEETTCCCEEECBTTS
T ss_pred CceeeeEcCCC--CEEEE---EEEECCEEE-----EEEEcCCCcceEEecCCC
Confidence 34445555433 45544 577884444 599999999999997643
No 63
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=23.18 E-value=1.2e+02 Score=27.40 Aligned_cols=43 Identities=23% Similarity=0.274 Sum_probs=28.8
Q ss_pred CeEEEEEecCCCCCeeEEEE---EEecCC---CcEEEEEEEcCCCceEEeCC
Q 016916 35 SSLLFQVHGNVYPTGYYNVT---MYIGQP---ARPYFLDLDTGSDLTWLQCD 80 (380)
Q Consensus 35 ~~~~lpl~~~~~~~~~y~~~---i~vGtP---~Q~~~v~~DTGSs~~wv~~~ 80 (380)
...-+|+..+ .+.|.++ |.||.- .....+++|||++++++|..
T Consensus 181 ~l~~~p~~~~---~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lP~~ 229 (329)
T 1oew_A 181 SITYTAVSTK---QGFWEWTSTGYAVGSGTFKSTSIDGIADTGTTLLYLPAT 229 (329)
T ss_dssp CCEEEECBCT---TSSCEEEEEEEEETTSCCEEEEEEEEECTTCCSEEECHH
T ss_pred ceEEEEccCC---CceEEEEEeeEEECCeeccCCCceEEEeCCCCCEECCHH
Confidence 4456777522 2245444 678753 24678999999999999854
No 64
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=23.17 E-value=1.1e+02 Score=27.65 Aligned_cols=44 Identities=23% Similarity=0.298 Sum_probs=29.9
Q ss_pred CCeEEEEEecCCCCCeeEEEE---EEecC---CCcEEEEEEEcCCCceEEeCC
Q 016916 34 GSSLLFQVHGNVYPTGYYNVT---MYIGQ---PARPYFLDLDTGSDLTWLQCD 80 (380)
Q Consensus 34 ~~~~~lpl~~~~~~~~~y~~~---i~vGt---P~Q~~~v~~DTGSs~~wv~~~ 80 (380)
+...-+|+... .+.|.++ |.||. +.+...+++|||++++++|..
T Consensus 181 g~l~~~p~~~~---~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lp~~ 230 (329)
T 3c9x_A 181 GPVAYTPVDNS---QGFWEFTASGYSVGGGKLNRNSIDGIADTGTTLLLLDDN 230 (329)
T ss_dssp SCEEEEECBCT---TSSCEEEECCEEETTCCCCSCCEEEEECTTCCSEEECHH
T ss_pred cceEEEEccCC---CceEEEEEeeEEECCEeccCCCceEEEECCCCcEeCCHH
Confidence 34456777522 2356555 56775 245789999999999999854
No 65
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=21.92 E-value=1.3e+02 Score=27.17 Aligned_cols=43 Identities=23% Similarity=0.356 Sum_probs=28.8
Q ss_pred CeEEEEEecCCCCCeeEEEE---EEecCC---CcEEEEEEEcCCCceEEeCC
Q 016916 35 SSLLFQVHGNVYPTGYYNVT---MYIGQP---ARPYFLDLDTGSDLTWLQCD 80 (380)
Q Consensus 35 ~~~~lpl~~~~~~~~~y~~~---i~vGtP---~Q~~~v~~DTGSs~~wv~~~ 80 (380)
...-+|+..+ .+.|.++ |.||.- .+...+++|||++++++|..
T Consensus 177 ~l~~~p~~~~---~~~w~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lP~~ 225 (325)
T 1ibq_A 177 SITYTDADSS---QGYWGFSTDGYSIGDGSSSSSGFSAIADTGTTLILLDDE 225 (325)
T ss_dssp CCEEEECBCT---TSSCEEEECEEEETTSCCBSCCEEEEECTTCCSEEECHH
T ss_pred ceEEEEcCCC---CceEEEEECcEEECCeeccCCCceEEEeCCCCcEeCCHH
Confidence 4456677522 2245554 677752 35689999999999999854
No 66
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=20.43 E-value=1e+02 Score=29.83 Aligned_cols=52 Identities=15% Similarity=0.317 Sum_probs=39.5
Q ss_pred ccceEEEEEecCCCCeEEEEcCCeEEEEeCC--CeEEEE-EEeCCcC-CCCCeeEEcccc
Q 016916 322 CFRTLALSFTDGKTRTLFELTPEAYLIISNK--GNVCLG-ILNGAEV-GLQDLNVIGGIG 377 (380)
Q Consensus 322 ~~P~l~f~f~g~~~~~~~~l~~~~y~~~~~~--~~~C~~-~~~~~~~-~~~~~~IlG~~~ 377 (380)
.+|+|+|+|+| ++|+|+|++|+++... +..|++ +...+.. +.+..||||+++
T Consensus 402 ~lP~i~f~~gg----~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~f 457 (478)
T 1qdm_A 402 SMPDIEFTIGG----KKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVF 457 (478)
T ss_dssp TCCCEEEEETT----EEEEECHHHHEEECSCGGGCCEEESEEECCCCTTSCSEEEECHHH
T ss_pred ccccEEEEECC----EEEEEChHHhEEEccCCCCCeEEEEEEeccCCCCCCCcEEECHHH
Confidence 58999999986 9999999999998754 357995 5543311 124589999985
No 67
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=20.35 E-value=1.1e+02 Score=28.48 Aligned_cols=44 Identities=20% Similarity=0.113 Sum_probs=27.2
Q ss_pred CeEEEEEecCCCCCeeEEEE---EEecC------CCcEE--------EEEEEcCCCceEEeCC
Q 016916 35 SSLLFQVHGNVYPTGYYNVT---MYIGQ------PARPY--------FLDLDTGSDLTWLQCD 80 (380)
Q Consensus 35 ~~~~lpl~~~~~~~~~y~~~---i~vGt------P~Q~~--------~v~~DTGSs~~wv~~~ 80 (380)
...-+||..+. .+.|.++ |.||. |+..+ .++||||++++.+|..
T Consensus 216 ~l~~~Pl~~~~--~~~y~v~l~~i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~ 276 (403)
T 3aup_A 216 DLAFTPLTITL--QGEYNVRVNSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQS 276 (403)
T ss_dssp TEEEEECEECT--TSCEEECEEEEEETTEEEECC------------CCEEECSSCSSEEECHH
T ss_pred ceeecccccCC--CCcceEEEEEEEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHH
Confidence 55677886542 2367665 56774 11112 1899999999999853
No 68
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=20.21 E-value=1.1e+02 Score=27.71 Aligned_cols=37 Identities=24% Similarity=0.441 Sum_probs=24.7
Q ss_pred eecccCCCCCeeEEeeEEEEC--CEEeeeCCCCEEEcccccceeeCHH
Q 016916 231 TSMSSDYTKYYSPGVAELFFG--GETTGLKNLPVVFDSGSSYTYLNRV 276 (380)
Q Consensus 231 ~pl~~~~~~~w~v~l~~i~vg--~~~~~~~~~~aiiDSGTs~~~lp~~ 276 (380)
+|+.... ..|.+ .|.+| .+.+ .+++|||++.+++|..
T Consensus 5 ~~l~~~~-~~Y~~---~i~iGtP~q~~-----~v~~DTGSs~~Wv~~~ 43 (334)
T 1j71_A 5 TTLINEG-PSYAA---DIVVGSNQQKQ-----TVVIDTGSSDLWVVDT 43 (334)
T ss_dssp EEEEECS-SSEEE---EEEETTTTEEE-----EEEEETTCCCEEEEEE
T ss_pred EEEecCC-cEEEE---EEEEcCCCcEE-----EEEEcCCCCCEEEecC
Confidence 3554443 45554 56777 3443 5899999999999843
Done!